KEGG T00720: RHECIAT

Rhizobium etli CIAT 652: RHECIAT_PA0000196

Entry

RHECIAT_PA0000196 CDS T00720

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

rec Rhizobium etli CIAT 652

Pathway

rec03410	Base excision repair
rec03420	Nucleotide excision repair
rec03430	Mismatch repair
rec03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:rec03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:rec03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:rec03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:rec03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2

Other DBs

NCBI-GI:

190895511

NCBI-GeneID:

6404072

UniProt:

B3Q1I4

Position

pA:210674..211738

AA seq 354 aa
MTRPRQPSAPLLRESSSSIQSRPVRRRDPAQPSLPFDAMPTRVEPCLALLKQTVPQGPDW
IYEVKWDGYRLAIHIEPKGIRILTRGGHDWTHRFPTIAAGASALGVSSCILDGEAVVLDE
EGRSDFGALQRSLGGRGGKRVSTESIFCAFDLLYLDGHDLTRTELSVRRHLLQDLIPGTD
EGAIRFSQELDLSGEDLLEHACHLGLEGIIAKRGDRPYRSGRLGDWQKIKCVQSDSFMIV
GYEESASTRGGLGSLLLAGRKGQDWIYVGSVGTGFNREEAEYLRKTLNRLQTKKPVVPLK
GKRLVFSQPTLIAEIEFRGWTREGSLRHASYKGLREIQDNAAVFDMTDGPAAIR

NT seq 1065 nt +upstreamnt +downstreamnt
atgaccagaccacggcagccctccgccccgcttcttcgcgagtccagctcttcgatacag
tctcgacctgtccgccggcgtgatcccgcccagccaagcctgccgttcgatgcaatgccg
accagagtggagccctgcttggcgctgctgaagcaaacggtgccgcaagggccggattgg
atttatgaggtgaagtgggacggctaccgattggcgatccacatcgagccaaagggcatt
cgtatcctcacccgcggcggccatgactggacccaccgattcccaacgattgccgcagga
gcaagcgcgcttggtgtatcgagctgcattctcgacggagaagccgtcgttctcgatgaa
gagggccgctccgactttggagcgttacagcgctcgctcggcggcaggggcggcaagcga
gtttcaaccgaatccatcttctgcgccttcgatctgttatacctcgatggtcacgacctg
acgcgcaccgagctctccgtccgccgtcaccttttgcaggacctgattcccgggaccgac
gagggcgccattcggttctcgcaagaactggatttgagtggcgaggatctgctcgagcac
gcctgccatctgggcctggaaggcatcattgcgaagcgcggggaccgcccttatcggagt
ggtcgtctcggggactggcagaagatcaagtgcgttcagagcgacagtttcatgatcgtc
ggttacgaggaatccgccagcacccgcggcgggctcggcagtcttttgcttgcgggtcga
aaggggcaagactggatctatgtcggatcggtcggcacggggttcaatcgggaggaggcg
gagtatttgcgcaagacgttgaaccgtctccaaacgaaaaaacctgtggtgccgctcaaa
ggaaagcgcctcgttttttcccagccgaccctcatcgccgaaatcgagtttcgcggctgg
acgcgcgagggcagcctccgccacgcttcatataagggccttcgtgagatacaggataat
gctgccgtcttcgatatgactgatggcccggctgcgatcagatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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