GenomeNet

Database: RefSeq
Entry: NC_000964
LinkDB: NC_000964
Original site: NC_000964 
LOCUS       NC_000964            4215606 bp    DNA     circular CON 31-DEC-2013
DEFINITION  Bacillus subtilis subsp. subtilis str. 168 chromosome, complete
            genome.
ACCESSION   NC_000964
VERSION     NC_000964.3  GI:255767013
DBLINK      BioProject: PRJNA57675
KEYWORDS    RefSeq; complete genome.
SOURCE      Bacillus subtilis subsp. subtilis str. 168
  ORGANISM  Bacillus subtilis subsp. subtilis str. 168
            Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
REFERENCE   1  (bases 1 to 4215606)
  AUTHORS   Barbe,V., Cruveiller,S., Kunst,F., Lenoble,P., Meurice,G.,
            Sekowska,A., Vallenet,D., Wang,T., Moszer,I., Medigue,C. and
            Danchin,A.
  TITLE     From a consortium sequence to a unified sequence: the Bacillus
            subtilis 168 reference genome a decade later
  JOURNAL   Microbiology (Reading, Engl.) 155 (PT 6), 1758-1775 (2009)
   PUBMED   19383706
REFERENCE   2  (bases 1 to 4215606)
  AUTHORS   Eichenberger,P., Fujita,M., Jensen,S.T., Conlon,E.M., Rudner,D.Z.,
            Wang,S.T., Ferguson,C., Haga,K., Sato,T., Liu,J.S. and Losick,R.
  TITLE     The program of gene transcription for a single differentiating cell
            type during sporulation in Bacillus subtilis
  JOURNAL   PLoS Biol. 2 (10), E328 (2004)
   PUBMED   15383836
REFERENCE   3  (bases 1 to 4215606)
  AUTHORS   Kunst,F., Ogasawara,N., Moszer,I., Albertini,A.M., Alloni,G.,
            Azevedo,V., Bertero,M.G., Bessieres,P., Bolotin,A., Borchert,S.,
            Borriss,R., Boursier,L., Brans,A., Braun,M., Brignell,S.C.,
            Bron,S., Brouillet,S., Bruschi,C.V., Caldwell,B., Capuano,V.,
            Carter,N.M., Choi,S.K., Codani,J.J., Connerton,I.F., Cummings,N.J.,
            Daniel,R.A., Denizot,F., Devine,K.M., Dusterhoft,A., Ehrlich,S.D.,
            Emmerson,P.T., Entian,K.D., Errington,J., Fabret,C., Ferrari,E.,
            Foulger,D., Fritz,C., Fujita,M., Fujita,Y., Fuma,S., Galizzi,A.,
            Galleron,N., Ghim,S.Y., Glaser,P., Goffeau,A., Golightly,E.J.,
            Grandi,G., Guiseppi,G., Guy,B.J., Haga,K., Haiech,J., Harwood,C.R.,
            Henaut,A., Hilbert,H., Holsappel,S., Hosono,S., Hullo,M.F.,
            Itaya,M., Jones,L., Joris,B., Karamata,D., Kasahara,Y.,
            Klaerr-Blanchard,M., Klein,C., Kobayashi,Y., Koetter,P.,
            Koningstein,G., Krogh,S., Kumano,M., Kurita,K., Lapidus,A.,
            Lardinois,S., Lauber,J., Lazarevic,V., Lee,S.M., Levine,A., Liu,H.,
            Masuda,S., Mauel,C., Medigue,C., Medina,N., Mellado,R.P.,
            Mizuno,M., Moestl,D., Nakai,S., Noback,M., Noone,D., O'Reilly,M.,
            Ogawa,K., Ogiwara,A., Oudega,B., Park,S.H., Parro,V., Pohl,T.M.,
            Portetelle,D., Porwollik,S., Prescott,A.M., Presecan,E., Pujic,P.,
            Purnelle,B., Rapoport,G., Rey,M., Reynolds,S., Rieger,M.,
            Rivolta,C., Rocha,E., Roche,B., Rose,M., Sadaie,Y., Sato,T.,
            Scanlan,E., Schleich,S., Schroeter,R., Scoffone,F., Sekiguchi,J.,
            Sekowska,A., Seror,S.J., Serror,P., Shin,B.S., Soldo,B.,
            Sorokin,A., Tacconi,E., Takagi,T., Takahashi,H., Takemaru,K.,
            Takeuchi,M., Tamakoshi,A., Tanaka,T., Terpstra,P., Tognoni,A.,
            Tosato,V., Uchiyama,S., Vandenbol,M., Vannier,F., Vassarotti,A.,
            Viari,A., Wambutt,R., Wedler,E., Wedler,H., Weitzenegger,T.,
            Winters,P., Wipat,A., Yamamoto,H., Yamane,K., Yasumoto,K., Yata,K.,
            Yoshida,K., Yoshikawa,H.F., Zumstein,E., Yoshikawa,H. and
            Danchin,A.
  TITLE     The complete genome sequence of the gram-positive bacterium
            Bacillus subtilis
  JOURNAL   Nature 390 (6657), 249-256 (1997)
   PUBMED   9384377
REFERENCE   4  (bases 1 to 4215606)
  AUTHORS   Mizuno,M., Masuda,S., Takemaru,K., Hosono,S., Sato,T., Takeuchi,M.
            and Kobayashi,Y.
  TITLE     Systematic sequencing of the 283 kb 210 degrees-232 degrees region
            of the Bacillus subtilis genome containing the skin element and
            many sporulation genes
  JOURNAL   Microbiology (Reading, Engl.) 142 (PT 11), 3103-3111 (1996)
   PUBMED   8969508
REFERENCE   5  (bases 1 to 4215606)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-AUG-2009) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   6  (bases 1 to 4215606)
  AUTHORS   Genoscope -,C.E.A.
  CONSRTM   Institut Pasteur and Genoscope
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2009) Genoscope - Centre National de Sequencage :
            BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr
            - Web : www.genoscope.cns.fr)
REFERENCE   7  (bases 1 to 4215606)
  AUTHORS   Kunst,F., Ogasawara,N., Yoshikawa,H. and Danchin,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-NOV-1997) I. Moszer, A. Danchin, Institut Pasteur,
            Regulation de l'Expression Genetique, 28 rue du Docteur Roux, 75724
            Paris Cedex 15, FRANCE. E-mail: moszer@pasteur.fr,
            adanchin@pasteur.fr Phone: +33 (0)1 45 68 84 41, Fax: +33 (0)1 45
            68 89 48
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AL009126.
            On Aug 12, 2009 this sequence version replaced gi:50812173.
            RefSeq Category:
            Annotation results relative to BLAST similarities, COG
            assignations, enzymatic function prediction (PRIAM software), TMHMM
            and SignalP predictions, and synteny conservation (Syntonizer
            software) are available in the MaGe annotation system
            http://www.genoscope.cns.fr/agc/mage.
            The large cluster comprising the i, h and g rDNA regions could not
            be properly resolved, we therefore incorporated the original
            sequence of rRNAihg in the final assembly.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4215606
                     /organism="Bacillus subtilis subsp. subtilis str. 168"
                     /mol_type="genomic DNA"
                     /strain="168"
                     /sub_species="subtilis"
                     /db_xref="taxon:224308"
     gene            410..1750
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /db_xref="GeneID:939978"
     CDS             410..1750
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /function="16.9: Replicate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds to the dnaA-box as an ATP-bound complex at
                     the origin of replication during the initiation of
                     chromosomal replication; can also affect transcription of
                     multiple genes including itself."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="NP_387882.1"
                     /db_xref="GI:16077069"
                     /db_xref="GeneID:939978"
                     /translation="MENILDLWNQALAQIEKKLSKPSFETWMKSTKAHSLQGDTLTIT
                     APNEFARDWLESRYLHLIADTIYELTGEELSIKFVIPQNQDVEDFMPKPQVKKAVKED
                     TSDFPQNMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHL
                     MHAIGHYVIDHNPSAKVVYLSSEKFTNEFINSIRDNKAVDFRNRYRNVDVLLIDDIQF
                     LAGKEQTQEEFFHTFNTLHEESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPP
                     DLETRIAILRKKAKAEGLDIPNEVMLYIANQIDSNIRELEGALIRVVAYSSLINKDIN
                     ADLAAEALKDIIPSSKPKVITIKEIQRVVGQQFNIKLEDFKAKKRTKSVAFPRQIAMY
                     LSREMTDSSLPKIGEEFGGRDHTTVIHAHEKISKLLADDEQLQQHVKEIKEQLK"
     misc_feature    416..1747
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /note="chromosomal replication initiation protein;
                     Reviewed; Region: dnaA; PRK00149"
                     /db_xref="CDD:234667"
     misc_feature    425..613
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /note="DnaA N-terminal domain; Region: DnaA_N; pfam11638"
                     /db_xref="CDD:256535"
     misc_feature    782..1216
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /note="The AAA+ (ATPases Associated with a wide variety of
                     cellular Activities) superfamily represents an ancient
                     group of ATPases belonging to the ASCE (for additional
                     strand, catalytic E) division of the P-loop NTPase fold.
                     The ASCE division also includes ABC; Region: AAA; cd00009"
                     /db_xref="CDD:99707"
     misc_feature    860..883
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /note="Walker A motif; other site"
                     /db_xref="CDD:99707"
     misc_feature    order(863..886,1049..1051,1148..1150)
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:99707"
     misc_feature    1037..1054
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /note="Walker B motif; other site"
                     /db_xref="CDD:99707"
     misc_feature    1187..1189
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /note="arginine finger; other site"
                     /db_xref="CDD:99707"
     misc_feature    1475..1744
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /note="C-terminal domain of bacterial DnaA proteins. The
                     DNA-binding C-terminal domain of DnaA contains a
                     helix-turn-helix motif that specifically interacts with
                     the DnaA box, a 9-mer motif that occurs repetitively in
                     the replication origin oriC. Multiple...; Region:
                     Bac_DnaA_C; cd06571"
                     /db_xref="CDD:119330"
     misc_feature    order(1544..1546,1568..1573,1592..1594,1610..1618,
                     1643..1657,1664..1666,1673..1678)
                     /gene="dnaA"
                     /locus_tag="BSU00010"
                     /note="DnaA box-binding interface [nucleotide binding];
                     other site"
                     /db_xref="CDD:119330"
     gene            1939..3075
                     /gene="dnaN"
                     /locus_tag="BSU00020"
                     /db_xref="GeneID:939970"
     CDS             1939..3075
                     /gene="dnaN"
                     /locus_tag="BSU00020"
                     /EC_number="2.7.7.7"
                     /function="16.9: Replicate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds the polymerase to DNA and acts as a sliding
                     clamp"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="NP_387883.1"
                     /db_xref="GI:16077070"
                     /db_xref="GeneID:939970"
                     /translation="MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDDGVSF
                     TGSDSDISIESFIPKEEGDKEIVTIEQPGSIVLQARFFSEIVKKLPMATVEIEVQNQY
                     LTIIRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTVFAVSTSETRP
                     ILTGVNWKVEQSELLCTATDSHRLALRKAKLDIPEDRSYNVVIPGKSLTELSKILDDN
                     QELVDIVITETQVLFKAKNVLFFSRLLDGNYPDTTSLIPQDSKTEIIVNTKEFLQAID
                     RASLLAREGRNNVVKLSAKPAESIEISSNSPEIGKVVEAIVADQIEGEELNISFSPKY
                     MLDALKVLEGAEIRVSFTGAMRPFLIRTPNDETIVQLILPVRTY"
     misc_feature    1939..3069
                     /gene="dnaN"
                     /locus_tag="BSU00020"
                     /note="DNA polymerase III subunit beta; Validated; Region:
                     PRK05643"
                     /db_xref="CDD:235541"
     misc_feature    1939..3066
                     /gene="dnaN"
                     /locus_tag="BSU00020"
                     /note="Beta clamp domain.  The beta subunit (processivity
                     factor) of DNA polymerase III holoenzyme, refered to as
                     the beta clamp, forms a ring shaped dimer that encircles
                     dsDNA (sliding clamp) in bacteria.  The beta-clamp is
                     structurally similar to the trimeric...; Region:
                     beta_clamp; cd00140"
                     /db_xref="CDD:238082"
     misc_feature    order(2008..2010,2176..2178,2197..2199,2554..2556)
                     /gene="dnaN"
                     /locus_tag="BSU00020"
                     /note="putative DNA binding surface [nucleotide binding];
                     other site"
                     /db_xref="CDD:238082"
     misc_feature    order(2179..2181,2188..2190,2266..2268,2272..2274,
                     2776..2778,2875..2880)
                     /gene="dnaN"
                     /locus_tag="BSU00020"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:238082"
     misc_feature    order(2473..2475,2479..2490,2929..2931,3055..3066)
                     /gene="dnaN"
                     /locus_tag="BSU00020"
                     /note="beta-clamp/clamp loader binding surface; other
                     site"
                     /db_xref="CDD:238082"
     misc_feature    order(2473..2475,2479..2484,2701..2703,2809..2811,
                     2851..2856,2938..2940,3055..3066)
                     /gene="dnaN"
                     /locus_tag="BSU00020"
                     /note="beta-clamp/translesion DNA polymerase binding
                     surface; other site"
                     /db_xref="CDD:238082"
     gene            3206..3421
                     /gene="yaaA"
                     /locus_tag="BSU00030"
                     /db_xref="GeneID:939444"
     CDS             3206..3421
                     /gene="yaaA"
                     /locus_tag="BSU00030"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf:  factor"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387884.1"
                     /db_xref="GI:16077071"
                     /db_xref="GeneID:939444"
                     /translation="MANPISIDTEMITLGQFLKLADVIQSGGMAKWFLSEHEVLVNDE
                     PDNRRGRKLYVGDVVEIEGFGSFQVVN"
     misc_feature    3215..3391
                     /gene="yaaA"
                     /locus_tag="BSU00030"
                     /note="S4 domain protein YaaA; Region: YaaA_near_RecF;
                     TIGR02988"
                     /db_xref="CDD:132033"
     gene            3437..4549
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /db_xref="GeneID:939454"
     CDS             3437..4549
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /function="16.6: Maintain"
                     /function="16.9: Replicate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Required for DNA replication; binds preferentially
                     to single-stranded, linear DNA"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication and repair protein RecF"
                     /protein_id="NP_387885.1"
                     /db_xref="GI:16077072"
                     /db_xref="GeneID:939454"
                     /translation="MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIY
                     VLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIEQQ
                     KLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
                     NHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGL
                     EELTLKYHTALDVSDPLDLSKIGDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNG
                     RDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTI
                     QGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK"
     misc_feature    3437..4531
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /note="recF protein; Region: recf; TIGR00611"
                     /db_xref="CDD:233051"
     misc_feature    3443..4540
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /note="ATP-binding cassette domain of RecF; Region:
                     ABC_RecF; cd03242"
                     /db_xref="CDD:213209"
     misc_feature    3524..3547
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /note="Walker A/P-loop; other site"
                     /db_xref="CDD:213209"
     misc_feature    order(3533..3538,3542..3550,3737..3739,4382..4387,
                     4469..4471)
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:213209"
     misc_feature    3728..3739
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /note="Q-loop/lid; other site"
                     /db_xref="CDD:213209"
     misc_feature    4283..4312
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /note="ABC transporter signature motif; other site"
                     /db_xref="CDD:213209"
     misc_feature    4370..4387
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /note="Walker B; other site"
                     /db_xref="CDD:213209"
     misc_feature    4394..4405
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /note="D-loop; other site"
                     /db_xref="CDD:213209"
     misc_feature    4457..4477
                     /gene="recF"
                     /locus_tag="BSU00040"
                     /note="H-loop/switch region; other site"
                     /db_xref="CDD:213209"
     gene            4567..4812
                     /gene="yaaB"
                     /locus_tag="BSU00050"
                     /db_xref="GeneID:939466"
     CDS             4567..4812
                     /gene="yaaB"
                     /locus_tag="BSU00050"
                     /function="18: Unknown function"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387886.2"
                     /db_xref="GI:255767014"
                     /db_xref="GeneID:939466"
                     /translation="MYIHLGDDFVVSTRDIVGIFDFKANMSPIVEEFLKKQKHKVVPS
                     VNGTPKSIVVTVQNIYYSPLSSSTLKKRAQFMFEIDS"
     gene            4867..6783
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /db_xref="GeneID:939456"
     CDS             4867..6783
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /EC_number="5.99.1.3"
                     /function="16.3: Control"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.9: Replicate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="negatively supercoils closed circular
                     double-stranded DNA"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="NP_387887.1"
                     /db_xref="GI:16077074"
                     /db_xref="GeneID:939456"
                     /translation="MEQQQNSYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWE
                     IVDNSIDEALAGYCTDINIQIEKDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHA
                     GGKFDGSGYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYKRGVPVTDLEIIG
                     ETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLTKGVNITIEDKREGQERKN
                     EYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQYNDSYTSNIYSFTNN
                     INTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDP
                     QFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDKGLMAARARMAAKKA
                     RELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQAILPL
                     RGKILNVEKARLDKILSNNEVRSMITALGTGIGEDFNLEKARYHKVVIMTDADVDGAH
                     IRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEELLKTLPQTP
                     KPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRN
                     FIEANARYVKNLDI"
     misc_feature    4867..6780
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="DNA gyrase subunit B; Validated; Region: gyrB;
                     PRK05644"
                     /db_xref="CDD:235542"
     misc_feature    4978..5277
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="Histidine kinase-like ATPases; This family includes
                     several ATP-binding proteins for example: histidine
                     kinase, DNA gyrase B, topoisomerases, heat shock protein
                     HSP90, phytochrome-like ATPases and DNA mismatch repair
                     proteins; Region: HATPase_c; cd00075"
                     /db_xref="CDD:238030"
     misc_feature    order(4996..4998,5008..5010,5017..5019,5083..5085,
                     5089..5091,5095..5097,5101..5106,5221..5232)
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:238030"
     misc_feature    5008..5010
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="Mg2+ binding site [ion binding]; other site"
                     /db_xref="CDD:238030"
     misc_feature    order(5095..5097,5101..5103,5221..5223,5227..5229)
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="G-X-G motif; other site"
                     /db_xref="CDD:238030"
     misc_feature    5536..6000
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
                     a ribosomal S5 domain 2-like fold, of the type found in
                     proteins of the type IIA family of DNA topoisomerases
                     similar to the B subunits of E. coli DNA gyrase and E.
                     coli Topoisomerase IV which are; Region:
                     TopoII_Trans_DNA_gyrase; cd00822"
                     /db_xref="CDD:238419"
     misc_feature    5689..5691
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="anchoring element; other site"
                     /db_xref="CDD:238419"
     misc_feature    order(5863..5865,5872..5877,5881..5883)
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:238419"
     misc_feature    order(5881..5883,5887..5889)
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:238419"
     misc_feature    6130..6471
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
                     nucleotidyl transferase/hydrolase domain of the type found
                     in proteins of the type IIA family of DNA topoisomerases
                     similar to the Escherichia coli GyrB subunit. TopoIIA
                     enzymes cut both strands of the...; Region:
                     TOPRIM_TopoIIA_GyrB; cd03366"
                     /db_xref="CDD:173786"
     misc_feature    order(6148..6153,6160..6162,6367..6369,6373..6375,
                     6379..6381)
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="active site"
                     /db_xref="CDD:173786"
     misc_feature    order(6148..6150,6367..6369)
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="putative metal-binding site [ion binding]; other
                     site"
                     /db_xref="CDD:173786"
     misc_feature    6562..6747
                     /gene="gyrB"
                     /locus_tag="BSU00060"
                     /note="DNA gyrase B subunit, carboxyl terminus; Region:
                     DNA_gyraseB_C; pfam00986"
                     /db_xref="CDD:250273"
     gene            6994..9459
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /db_xref="GeneID:940002"
     CDS             6994..9459
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /EC_number="5.99.1.3"
                     /function="16.3: Control"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.9: Replicate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="negatively supercoils closed circular
                     double-stranded DNA"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="NP_387888.1"
                     /db_xref="GI:16077075"
                     /db_xref="GeneID:940002"
                     /translation="MSEQNTPQVREINISQEMRTSFLDYAMSVIVSRALPDVRDGLKP
                     VHRRILYAMNDLGMTSDKPYKKSARIVGEVIGKYHPHGDSAVYESMVRMAQDFNYRYM
                     LVDGHGNFGSVDGDSAAAMRYTEARMSKISMEILRDITKDTIDYQDNYDGSEREPVVM
                     PSRFPNLLVNGAAGIAVGMATNIPPHQLGEIIDGVLAVSENPDITIPELMEVIPGPDF
                     PTAGQILGRSGIRKAYESGRGSITIRAKAEIEQTSSGKERIIVTELPYQVNKAKLIEK
                     IADLVRDKKIEGITDLRDESDRTGMRIVIEIRRDANANVILNNLYKQTALQTSFGINL
                     LALVDGQPKVLTLKQCLEHYLDHQKVVIRRRTAYELRKAEARAHILEGLRVALDHLDA
                     VISLIRNSQTAEIARTGLIEQFSLTEKQAQAILDMRLQRLTGLEREKIEEEYQSLVKL
                     IAELKDILANEYKVLEIIREELTEIKERFNDERRTEIVTSGLETIEDEDLIERENIVV
                     TLTHNGYVKRLPASTYRSQKRGGKGVQGMGTNEDDFVEHLISTSTHDTILFFSNKGKV
                     YRAKGYEIPEYGRTAKGIPIINLLEVEKGEWINAIIPVTEFNAELYLFFTTKHGVSKR
                     TSLSQFANIRNNGLIALSLREDDELMGVRLTDGTKQIIIGTKNGLLIRFPETDVREMG
                     RTAAGVKGITLTDDDVVVGMEILEEESHVLIVTEKGYGKRTPAEEYRTQSRGGKGLKT
                     AKITENNGQLVAVKATKGEEDLMIITASGVLIRMDINDISITGRVTQGVRLIRMAEEE
                     HVATVALVEKNEEDENEEEQEEV"
     misc_feature    7015..9411
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="DNA gyrase subunit A; Validated; Region: PRK05560"
                     /db_xref="CDD:235502"
     misc_feature    7084..8418
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="DNA Topoisomerase, subtype IIA; domain A';
                     bacterial DNA topoisomerase IV (C subunit, ParC),
                     bacterial DNA gyrases (A subunit, GyrA),mammalian DNA
                     toposiomerases II. DNA topoisomerases are essential
                     enzymes that regulate the conformational changes...;
                     Region: TOP4c; cd00187"
                     /db_xref="CDD:238111"
     misc_feature    order(7084..7167,7180..7329,7333..7389,7393..7464,
                     7471..7473)
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="CAP-like domain; other site"
                     /db_xref="CDD:238111"
     misc_feature    7360..7362
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="active site"
                     /db_xref="CDD:238111"
     misc_feature    order(8155..8163,8170..8181,8212..8217,8257..8307)
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="primary dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:238111"
     misc_feature    8512..8649
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="DNA gyrase C-terminal domain, beta-propeller;
                     Region: DNA_gyraseA_C; pfam03989"
                     /db_xref="CDD:252298"
     misc_feature    8656..8808
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="DNA gyrase C-terminal domain, beta-propeller;
                     Region: DNA_gyraseA_C; pfam03989"
                     /db_xref="CDD:252298"
     misc_feature    8827..8961
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="DNA gyrase C-terminal domain, beta-propeller;
                     Region: DNA_gyraseA_C; pfam03989"
                     /db_xref="CDD:252298"
     misc_feature    8968..9105
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="DNA gyrase C-terminal domain, beta-propeller;
                     Region: DNA_gyraseA_C; pfam03989"
                     /db_xref="CDD:252298"
     misc_feature    9121..9264
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="DNA gyrase C-terminal domain, beta-propeller;
                     Region: DNA_gyraseA_C; pfam03989"
                     /db_xref="CDD:252298"
     misc_feature    9271..9411
                     /gene="gyrA"
                     /locus_tag="BSU00070"
                     /note="DNA gyrase C-terminal domain, beta-propeller;
                     Region: DNA_gyraseA_C; pfam03989"
                     /db_xref="CDD:252298"
     gene            9810..11364
                     /gene="rrnO-16S"
                     /locus_tag="BSU_rRNA_1"
                     /db_xref="GeneID:936774"
     rRNA            9810..11364
                     /gene="rrnO-16S"
                     /locus_tag="BSU_rRNA_1"
                     /product="ribosomal RNA-16S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936774"
     gene            11464..11540
                     /gene="trnO-Ile"
                     /locus_tag="BSU_tRNA_5"
                     /db_xref="GeneID:2914186"
     tRNA            11464..11540
                     /gene="trnO-Ile"
                     /locus_tag="BSU_tRNA_5"
                     /product="tRNA-Ile"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914186"
     gene            11552..11627
                     /gene="trnO-Ala"
                     /locus_tag="BSU_tRNA_6"
                     /db_xref="GeneID:939967"
     tRNA            11552..11627
                     /gene="trnO-Ala"
                     /locus_tag="BSU_tRNA_6"
                     /product="tRNA-Ala"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:939967"
     gene            11709..14636
                     /gene="rrnO-23S"
                     /locus_tag="BSU_rRNA_2"
                     /db_xref="GeneID:939981"
     rRNA            11709..14636
                     /gene="rrnO-23S"
                     /locus_tag="BSU_rRNA_2"
                     /product="ribosomal RNA-23S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:939981"
     gene            14692..14810
                     /gene="rrnO-5S"
                     /locus_tag="BSU_rRNA_3"
                     /db_xref="GeneID:2914271"
     rRNA            14692..14810
                     /gene="rrnO-5S"
                     /locus_tag="BSU_rRNA_3"
                     /product="ribosomal RNA-5S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914271"
     gene            complement(14847..15794)
                     /gene="yaaC"
                     /locus_tag="BSU00080"
                     /db_xref="GeneID:939969"
     CDS             complement(14847..15794)
                     /gene="yaaC"
                     /locus_tag="BSU00080"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387889.1"
                     /db_xref="GI:16077076"
                     /db_xref="GeneID:939969"
                     /translation="MTYHEWKDLALFYSVESTQKFLEKVYILNGINDAKKNSFKNSER
                     FIYFLKHAESFYKQAAYSPLEIKPILLFYGMAQLIKACLITRDPHYPSHTSVLAHGVT
                     TRKRKKQNYCFSDDEVKIQRNGLCVHFMKHLFGQSDIVDERYTMKKLLMAIPELSDIF
                     YFQQKERFMTKVEKDKNEIFVPEEVVINYKMSDSRFAEYMSHHYQWSFTKKNEHGLLF
                     EISPQDKEPWTSTSLLFDMEKNQYYIPSQREQFLRLPEMTIHYLILYNVGMIARYETE
                     WWYELLTQHISDDYVLIQQFLLVSEKKFPKYASQFLLHF"
     misc_feature    complement(14859..15779)
                     /gene="yaaC"
                     /locus_tag="BSU00080"
                     /note="YaaC-like Protein; Region: YaaC; pfam14175"
                     /db_xref="CDD:258377"
     gene            15915..17381
                     /gene="guaB"
                     /locus_tag="BSU00090"
                     /db_xref="GeneID:938032"
     CDS             15915..17381
                     /gene="guaB"
                     /locus_tag="BSU00090"
                     /EC_number="1.1.1.205"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the synthesis of xanthosine monophosphate
                     by the NAD+ dependent oxidation of inosine monophosphate"
                     /codon_start=1
                     /transl_table=11
                     /product="inosine-5'-monophosphate dehydrogenase"
                     /protein_id="NP_387890.1"
                     /db_xref="GI:16077077"
                     /db_xref="GeneID:938032"
                     /translation="MWESKFSKEGLTFDDVLLVPAKSEVLPRDVDLSVELTKTLKLNI
                     PVISAGMDTVTESAMAIAMARQGGLGIIHKNMSIEQQAEQVDKVKRSERGVITNPFFL
                     TPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRDLRFISDYSMKISDVMTKE
                     ELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDIEKVIEFPNSSKDIH
                     GRLIVGAAVGVTGDTMTRVKKLVEANVDVIVIDTAHGHSQGVLNTVTKIRETYPELNI
                     IAGNVATAEATRALIEAGADVVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKH
                     GKTIIADGGIKFSGDITKALAAGGHAVMLGSLLAGTSESPGETEIYQGRRFKVYRGMG
                     SVAAMEKGSKDRYFQEENKKFVPEGIEGRTPYKGPVEETVYQLVGGLRSGMGYCGSKD
                     LRALREEAQFIRMTGAGLRESHPHDVQITKESPNYTIS"
     misc_feature    15921..17378
                     /gene="guaB"
                     /locus_tag="BSU00090"
                     /note="inosine 5'-monophosphate dehydrogenase; Reviewed;
                     Region: PRK05567"
                     /db_xref="CDD:235507"
     misc_feature    15942..17303
                     /gene="guaB"
                     /locus_tag="BSU00090"
                     /note="IMPDH: The catalytic domain of the inosine
                     monophosphate dehydrogenase. IMPDH catalyzes the
                     NAD-dependent oxidation of inosine 5'-monophosphate (IMP)
                     to xanthosine 5' monophosphate (XMP). It is a
                     rate-limiting step in the de novo synthesis of...; Region:
                     IMPDH; cd00381"
                     /db_xref="CDD:238223"
     misc_feature    order(16059..16061,16830..16838,16935..16937,16941..16943,
                     17004..17009,17076..17078,17082..17090,17160..17165)
                     /gene="guaB"
                     /locus_tag="BSU00090"
                     /note="active site"
                     /db_xref="CDD:238223"
     misc_feature    16200..16532
                     /gene="guaB"
                     /locus_tag="BSU00090"
                     /note="This cd contains two tandem repeats of the
                     cystathionine beta-synthase (CBS pair) domains in the
                     inosine 5' monophosphate dehydrogenase (IMPDH) protein.
                     IMPDH is an essential enzyme that catalyzes the first step
                     unique to GTP synthesis, playing a...; Region:
                     CBS_pair_IMPDH; cd04601"
                     /db_xref="CDD:239974"
     gene            17534..18865
                     /gene="dacA"
                     /locus_tag="BSU00100"
                     /db_xref="GeneID:940000"
     CDS             17534..18865
                     /gene="dacA"
                     /locus_tag="BSU00100"
                     /EC_number="3.4.16.4"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 8370539, 9864321; Product
                     type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase DacA"
                     /protein_id="NP_387891.1"
                     /db_xref="GI:16077078"
                     /db_xref="GeneID:940000"
                     /translation="MNIKKCKQLLMSLVVLTLAVTCLAPMSKAKAASDPIDINASAAI
                     MIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIDQGKVKWDQTYTPDDYVYEIS
                     QDNSLSNVPLRKDGKYTVKELYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKE
                     LGLTDYKFVNATGLENKDLHGHQPEGTSVNEESEVSAKDMAVLADHLITDYPEILETS
                     SIAKTKFREGTDDEMDMPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAERN
                     GMRVITVVLNAKGNLHTGRFDETKKMFDYAFDNFSMKEIYAEGDQVKGHKTISVDKGK
                     EKEVGIVTNKAFSLPVKNGEEKNYKAKVTLNKDNLTAPVKKGTKVGKLTAEYTGDEKD
                     YGFLNSDLAGVDLVTKENVEKANWFVLTMRSIGGFFAGIWGSIVDTVTGWF"
     misc_feature    17546..18862
                     /gene="dacA"
                     /locus_tag="BSU00100"
                     /note="D-alanyl-D-alanine carboxypeptidase [Cell envelope
                     biogenesis, outer membrane]; Region: DacC; COG1686"
                     /db_xref="CDD:224600"
     misc_feature    17615..18400
                     /gene="dacA"
                     /locus_tag="BSU00100"
                     /note="Beta-lactamase enzyme family; Region:
                     Beta-lactamase2; cl19191"
                     /db_xref="CDD:267544"
     misc_feature    18461..18772
                     /gene="dacA"
                     /locus_tag="BSU00100"
                     /note="Penicillin-binding protein 5, C-terminal domain;
                     Region: PBP5_C; smart00936"
                     /db_xref="CDD:198004"
     gene            19062..19946
                     /gene="yaaD"
                     /locus_tag="BSU00110"
                     /db_xref="GeneID:939988"
     CDS             19062..19946
                     /gene="yaaD"
                     /locus_tag="BSU00110"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="with PdxT forms pyridoxal 5'-phosphate from
                     glutamine, either ribose 5-phosphate or ribulose
                     5-phosphate, and either glyceraldehyde 3-phosphate or
                     dihydroxyacetone phosphate"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal biosynthesis lyase PdxS"
                     /protein_id="NP_387892.1"
                     /db_xref="GI:16077079"
                     /db_xref="GeneID:939988"
                     /translation="MAQTGTERVKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMA
                     LERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYID
                     ESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEA
                     VRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATP
                     ADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHFTDYKLIAELSKELGTAMK
                     GIEISNLLPEQRMQERGW"
     misc_feature    19092..19940
                     /gene="yaaD"
                     /locus_tag="BSU00110"
                     /note="PdxS is a subunit of the pyridoxal 5'-phosphate
                     (PLP) synthase, an important enzyme in deoxyxylulose
                     5-phosphate (DXP)-independent pathway for de novo
                     biosynthesis of PLP,  present in some eubacteria, in
                     archaea, fungi, plants, plasmodia, and some...; Region:
                     pdxS; cd04727"
                     /db_xref="CDD:240078"
     misc_feature    order(19131..19133,19188..19190,19302..19304,19518..19526,
                     19701..19703,19758..19760)
                     /gene="yaaD"
                     /locus_tag="BSU00110"
                     /note="active site"
                     /db_xref="CDD:240078"
     misc_feature    order(19233..19235,19239..19241,19263..19265,19308..19310,
                     19317..19325,19332..19334,19383..19397,19521..19529,
                     19533..19535,19542..19547,19554..19556,19707..19709,
                     19716..19721,19842..19844)
                     /gene="yaaD"
                     /locus_tag="BSU00110"
                     /note="multimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:240078"
     gene            19968..20558
                     /gene="yaaE"
                     /locus_tag="BSU00120"
                     /db_xref="GeneID:939971"
     CDS             19968..20558
                     /gene="yaaE"
                     /locus_tag="BSU00120"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="with PdxST is involved in the biosynthesis of
                     pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of
                     glutamine to glutamate and ammonia; PdxS utilizes the
                     ammonia to synthesize pyridoxal 5'-phosphate"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase subunit PdxT"
                     /protein_id="NP_387893.1"
                     /db_xref="GI:16077080"
                     /db_xref="GeneID:939971"
                     /translation="MLTIGVLGLQGAVREHIHAIEACGAAGLVVKRPEQLNEVDGLIL
                     PGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNPHLGLLNV
                     VVERNSFGRQVDSFEADLTIKGLDEPFTGVFIRAPHILEAGENVEVLSEHNGRIVAAK
                     QGQFLGCSFHPELTEDHRVTQLFVEMVEEYKQKALV"
     misc_feature    19977..20519
                     /gene="yaaE"
                     /locus_tag="BSU00120"
                     /note="Glutamine Amidotransferase (GATase_I) involved in
                     pyridoxine biosynthesis; Region: GATase1_PB; cd01749"
                     /db_xref="CDD:153220"
     misc_feature    20016..20528
                     /gene="yaaE"
                     /locus_tag="BSU00120"
                     /note="Glutamine amidotransferase class-I; Region: GATase;
                     pfam00117"
                     /db_xref="CDD:249601"
     misc_feature    order(20103..20111,20202..20204,20283..20285,20367..20372,
                     20475..20477,20481..20483)
                     /gene="yaaE"
                     /locus_tag="BSU00120"
                     /note="predicted active site [active]"
                     /db_xref="CDD:153220"
     misc_feature    order(20202..20204,20475..20477,20481..20483)
                     /gene="yaaE"
                     /locus_tag="BSU00120"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:153220"
     gene            20611..20823
                     /locus_tag="BSU_misc_RNA_1"
                     /db_xref="GeneID:8303079"
     misc_RNA        20611..20823
                     /locus_tag="BSU_misc_RNA_1"
                     /product="T-box"
                     /inference="profile:Rfam:8.1"
                     /db_xref="GeneID:8303079"
     gene            20880..22157
                     /gene="serS"
                     /locus_tag="BSU00130"
                     /db_xref="GeneID:939994"
     CDS             20880..22157
                     /gene="serS"
                     /locus_tag="BSU00130"
                     /EC_number="6.1.1.11"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes a two-step reaction, first charging a
                     serine molecule by linking its carboxyl group to the
                     alpha-phosphate of ATP, followed by transfer of the
                     aminoacyl-adenylate to its tRNA"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="NP_387894.1"
                     /db_xref="GI:16077081"
                     /db_xref="GeneID:939994"
                     /translation="MLDTKMLRANFQEIKAKLVHKGEDLTDFDKFEALDDRRRELIGK
                     VEELKGKRNEVSQQVAVLKREKKDADHIIKEMREVGEEIKKLDEELRTVEAELDTILL
                     SIPNIPHESVPVGETEDDNVEVRKWGEKPSFAYEPKPHWDIADELGILDFERAAKVTG
                     SRFVFYKGLGARLERALYNFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDA
                     FKIREEDYFLIPTAEVPITNMHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLI
                     RQHQFNKVELVKFVKPEDSYEELEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKK
                     YDIEVWIPSQDTYREISSCSNFEAFQARRANIRFRREAKGKPEHVHTLNGSGLAVGRT
                     VAAILENYQQEDGSVVIPKVLRPYMGNREVMKP"
     misc_feature    20880..22154
                     /gene="serS"
                     /locus_tag="BSU00130"
                     /note="seryl-tRNA synthetase; Provisional; Region:
                     PRK05431"
                     /db_xref="CDD:235461"
     misc_feature    20880..21203
                     /gene="serS"
                     /locus_tag="BSU00130"
                     /note="Seryl-tRNA synthetase N-terminal domain; Region:
                     Seryl_tRNA_N; pfam02403"
                     /db_xref="CDD:251274"
     misc_feature    21237..22130
                     /gene="serS"
                     /locus_tag="BSU00130"
                     /note="Seryl-tRNA synthetase (SerRS) class II core
                     catalytic domain. SerRS is responsible for the attachment
                     of serine to the 3' OH group of ribose of the appropriate
                     tRNA. This domain It is primarily responsible for
                     ATP-dependent formation of the enzyme...; Region:
                     SerRS_core; cd00770"
                     /db_xref="CDD:238393"
     misc_feature    order(21339..21356,21363..21383,21393..21395,21399..21401,
                     21405..21407,21414..21416,21453..21464,21468..21476,
                     21480..21482,21534..21539,21543..21545,21555..21557,
                     21582..21584,21594..21596,21606..21608,21654..21656,
                     21717..21719,22125..22130)
                     /gene="serS"
                     /locus_tag="BSU00130"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:238393"
     misc_feature    order(21360..21362,21570..21572,21576..21578,21663..21665,
                     21669..21671,21687..21689,21696..21698,21705..21707,
                     21711..21713,21720..21722,21726..21728,21732..21734,
                     21924..21935,22026..22028,22032..22034,22050..22052)
                     /gene="serS"
                     /locus_tag="BSU00130"
                     /note="active site"
                     /db_xref="CDD:238393"
     misc_feature    21453..21476
                     /gene="serS"
                     /locus_tag="BSU00130"
                     /note="motif 1; other site"
                     /db_xref="CDD:238393"
     misc_feature    21660..21671
                     /gene="serS"
                     /locus_tag="BSU00130"
                     /note="motif 2; other site"
                     /db_xref="CDD:238393"
     misc_feature    order(22035..22043,22050..22052)
                     /gene="serS"
                     /locus_tag="BSU00130"
                     /note="motif 3; other site"
                     /db_xref="CDD:238393"
     gene            22292..22384
                     /gene="trnSL-Ser1"
                     /locus_tag="BSU_tRNA_7"
                     /db_xref="GeneID:2914247"
     tRNA            22292..22384
                     /gene="trnSL-Ser1"
                     /locus_tag="BSU_tRNA_7"
                     /product="tRNA-Ser"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914247"
     gene            complement(22496..23149)
                     /gene="dck"
                     /locus_tag="BSU00140"
                     /db_xref="GeneID:936793"
     CDS             complement(22496..23149)
                     /gene="dck"
                     /locus_tag="BSU00140"
                     /EC_number="2.7.1.74"
                     /EC_number="2.7.1.76"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11078735, 6251049;
                     Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyadenosine/deoxycytidine kinase"
                     /protein_id="NP_387895.1"
                     /db_xref="GI:16077082"
                     /db_xref="GeneID:936793"
                     /translation="MKEHHIPKNSIITVAGTVGVGKSTLTKTLAKRLGFKTSLEEVDH
                     NPYLEKFYHDFERWSFHLQIYFLAERFKEQKTIFEAGGGFVQDRSIYEDTGIFAKMHA
                     DKGTMSKVDYKTYTSLFEAMVMTPYFPHPDVLIYLEGDLENILNRIEQRGREMELQTS
                     RSYWEEMHTRYENWISGFNACPVLKLRIEDYDLLNDENSIENIVDQIASVIHDNQKK"
     misc_feature    complement(22499..23134)
                     /gene="dck"
                     /locus_tag="BSU00140"
                     /note="Deoxynucleoside kinases [Nucleotide transport and
                     metabolism]; Region: COG1428"
                     /db_xref="CDD:224345"
     misc_feature    complement(22559..23119)
                     /gene="dck"
                     /locus_tag="BSU00140"
                     /note="Deoxyribonucleoside kinase (dNK) catalyzes the
                     phosphorylation of deoxyribonucleosides to yield
                     corresponding monophosphates (dNMPs). This family consists
                     of various deoxynucleoside kinases including deoxyribo-
                     cytidine (EC 2.7.1.74), guanosine (EC 2.7.1; Region: dNK;
                     cd01673"
                     /db_xref="CDD:238836"
     misc_feature    complement(order(22682..22684,22697..22699,22859..22861,
                     22961..22966,22994..22996,23081..23086,23090..23092))
                     /gene="dck"
                     /locus_tag="BSU00140"
                     /note="Substrate-binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238836"
     misc_feature    complement(22940..22942)
                     /gene="dck"
                     /locus_tag="BSU00140"
                     /note="Substrate specificity [chemical binding]; other
                     site"
                     /db_xref="CDD:238836"
     gene            complement(23146..23769)
                     /gene="dgk"
                     /locus_tag="BSU00150"
                     /db_xref="GeneID:937037"
     CDS             complement(23146..23769)
                     /gene="dgk"
                     /locus_tag="BSU00150"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11078735; Product type e:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosine kinase"
                     /protein_id="NP_387896.1"
                     /db_xref="GI:16077083"
                     /db_xref="GeneID:937037"
                     /translation="MNTAPFIAIEGPIGAGKTTLATMLSQKFGFPMINEIVEDNPYLD
                     KFYDNIKEWSFQLEMFFLCHRYKQLEDTSDHFLKKGQPVIADYHIYKNVIFAERTLSP
                     HQLEKYKKIYHLLTDDLPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLIS
                     DYEVAIKQLQEADPELTVLTVDGDSKDFVLNKSDFERIAAHVKELIV"
     misc_feature    complement(23149..23769)
                     /gene="dgk"
                     /locus_tag="BSU00150"
                     /note="Deoxynucleoside kinases [Nucleotide transport and
                     metabolism]; Region: COG1428"
                     /db_xref="CDD:224345"
     misc_feature    complement(23194..23754)
                     /gene="dgk"
                     /locus_tag="BSU00150"
                     /note="Deoxyribonucleoside kinase (dNK) catalyzes the
                     phosphorylation of deoxyribonucleosides to yield
                     corresponding monophosphates (dNMPs). This family consists
                     of various deoxynucleoside kinases including deoxyribo-
                     cytidine (EC 2.7.1.74), guanosine (EC 2.7.1; Region: dNK;
                     cd01673"
                     /db_xref="CDD:238836"
     misc_feature    complement(order(23329..23331,23344..23346,23482..23484,
                     23596..23601,23629..23631,23716..23721,23725..23727))
                     /gene="dgk"
                     /locus_tag="BSU00150"
                     /note="Substrate-binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238836"
     misc_feature    complement(23575..23577)
                     /gene="dgk"
                     /locus_tag="BSU00150"
                     /note="Substrate specificity [chemical binding]; other
                     site"
                     /db_xref="CDD:238836"
     gene            complement(23868..25151)
                     /gene="yaaH"
                     /locus_tag="BSU00160"
                     /db_xref="GeneID:937029"
     CDS             complement(23868..25151)
                     /gene="yaaH"
                     /locus_tag="BSU00160"
                     /function="16.13: Shape"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11011148, 11737650,
                     12177332, 10419957; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="spore germination protein YaaH"
                     /protein_id="NP_387897.1"
                     /db_xref="GI:16077084"
                     /db_xref="GeneID:937029"
                     /translation="MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPI
                     AGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPAPKRDIESN
                     AYLEPRGNQVSENLQQAAREASPYLTYLGAFSFQAQRNGTLVAPPLTNLRSITESQNT
                     TLMMIITNLENQAFSDELGRILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRPQ
                     DREAYNQFLREARDLFHREGLEISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLM
                     TYEWGYSGGPPQAVSPIGPVRDVIEYALTEMPANKIVMGQNLYGYDWTLPYTAGGTPA
                     RAVSPQQAIVIADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIK
                     ELNLRGISYWKLGLSFPQNWLLLSDQFNVVKKTFR"
     misc_feature    complement(23892..25151)
                     /gene="yaaH"
                     /locus_tag="BSU00160"
                     /note="Predicted glycosyl hydrolase [General function
                     prediction only]; Region: COG3858"
                     /db_xref="CDD:226376"
     misc_feature    complement(25026..25148)
                     /gene="yaaH"
                     /locus_tag="BSU00160"
                     /note="Lysine Motif is a small domain involved in binding
                     peptidoglycan; Region: LysM; cd00118"
                     /db_xref="CDD:212030"
     misc_feature    complement(24879..25013)
                     /gene="yaaH"
                     /locus_tag="BSU00160"
                     /note="Lysine Motif is a small domain involved in binding
                     peptidoglycan; Region: LysM; cd00118"
                     /db_xref="CDD:212030"
     misc_feature    complement(23907..24857)
                     /gene="yaaH"
                     /locus_tag="BSU00160"
                     /note="Cortical fragment-lytic enzyme (CFLE) is a
                     peptidoglycan hydrolase involved in  bacterial endospore
                     germination.  CFLE is expressed as an inactive preprotein
                     (called SleB) in the forespore compartment of sporulating
                     cells.  SleB translocates across the...; Region:
                     GH18_CFLE_spore_hydrolase; cd02874"
                     /db_xref="CDD:119353"
     misc_feature    complement(order(23946..23948,24195..24197,24315..24320,
                     24324..24326,24513..24515,24519..24521,24525..24527,
                     24630..24632,24750..24755,24843..24845))
                     /gene="yaaH"
                     /locus_tag="BSU00160"
                     /note="active site"
                     /db_xref="CDD:119353"
     gene            complement(25221..25766)
                     /gene="yaaI"
                     /locus_tag="BSU00170"
                     /db_xref="GeneID:937036"
     CDS             complement(25221..25766)
                     /gene="yaaI"
                     /locus_tag="BSU00170"
                     /EC_number="3.3.2.1"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 2521622; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase"
                     /protein_id="NP_387898.1"
                     /db_xref="GI:16077085"
                     /db_xref="GeneID:937036"
                     /translation="MSKADKALLIVDMINNFEFDMGETLAKKTEKIVPHILSLKEHAR
                     QNEWPIIYINDHYGLWQADIKNIQQECTNERSKDIITKIAPVDADYFLIKPKHSAFYE
                     TALHTLLTELQVRHIIITGIAGNICVLFTANDAYMREYSITIPKDCIASNSDEDNEFA
                     LTMMENVLFAEITTEEQIIEK"
     misc_feature    complement(25272..25748)
                     /gene="yaaI"
                     /locus_tag="BSU00170"
                     /note="Cysteine hydrolases; This family contains
                     amidohydrolases, like CSHase (N-carbamoylsarcosine
                     amidohydrolase), involved in creatine metabolism and
                     nicotinamidase, converting nicotinamide to nicotinic acid
                     and ammonia in the pyridine nucleotide cycle. It...;
                     Region: cysteine_hydrolases; cd00431"
                     /db_xref="CDD:238245"
     misc_feature    complement(order(25386..25388,25485..25487,25731..25733))
                     /gene="yaaI"
                     /locus_tag="BSU00170"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238245"
     misc_feature    complement(25398..25403)
                     /gene="yaaI"
                     /locus_tag="BSU00170"
                     /note="conserved cis-peptide bond; other site"
                     /db_xref="CDD:238245"
     gene            25852..26337
                     /gene="tadA"
                     /locus_tag="BSU00180"
                     /db_xref="GeneID:937989"
     CDS             25852..26337
                     /gene="tadA"
                     /locus_tag="BSU00180"
                     /EC_number="3.5.-.-"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 16014871, 16700551; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-specific adenosine deaminase"
                     /protein_id="NP_387899.1"
                     /db_xref="GI:16077086"
                     /db_xref="GeneID:937989"
                     /translation="MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVINGEIIARAHNLR
                     ETEQRSIAHAEMLVIDEACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGA
                     FDPKGGCSGTLMNLLQEERFNHQAEVVSGVLEEECGGMLSAFFRELRKKKKAARKNLS
                     E"
     misc_feature    25873..26196
                     /gene="tadA"
                     /locus_tag="BSU00180"
                     /note="Nucleoside deaminases include adenosine, guanine
                     and cytosine deaminases. These enzymes are Zn dependent
                     and catalyze the deamination of nucleosides. The zinc ion
                     in the active site plays a central role in the proposed
                     catalytic mechanism, activating a...; Region:
                     nucleoside_deaminase; cd01285"
                     /db_xref="CDD:238612"
     misc_feature    order(25927..25929,25975..25977,26008..26016,26098..26100,
                     26107..26109)
                     /gene="tadA"
                     /locus_tag="BSU00180"
                     /note="nucleoside/Zn binding site; other site"
                     /db_xref="CDD:238612"
     misc_feature    order(26002..26004,26017..26019,26029..26031,26101..26106,
                     26113..26118,26125..26130)
                     /gene="tadA"
                     /locus_tag="BSU00180"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:238612"
     misc_feature    order(26008..26016,26095..26100,26107..26109)
                     /gene="tadA"
                     /locus_tag="BSU00180"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:238612"
     gene            26533..26635
                     /gene="scr"
                     /locus_tag="BSU_misc_RNA_2"
                     /db_xref="GeneID:8302906"
     misc_RNA        26533..26635
                     /gene="scr"
                     /locus_tag="BSU_misc_RNA_2"
                     /product="small cytoplasmic RNA (scRNA, 4.5S RNA), signal
                     recognition particle-like (SRP) component"
                     /inference="profile:Rfam:8.1"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain"
                     /db_xref="GeneID:8302906"
     gene            26814..28505
                     /gene="dnaX"
                     /locus_tag="BSU00190"
                     /db_xref="GeneID:936899"
     CDS             26814..28505
                     /gene="dnaX"
                     /locus_tag="BSU00190"
                     /EC_number="2.7.7.7"
                     /function="16.9: Replicate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the DNA-template-directed extension of
                     the 3'-end of a DNA strand the tau chain serves as a
                     scaffold to help in the dimerizaton of the alpha,epsilon
                     and theta core complex; the gamma chain seems to interact
                     with the delta and delta' subunits to transfer the beta
                     subunit on the DNA"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="NP_387900.2"
                     /db_xref="GI:255767015"
                     /db_xref="GeneID:936899"
                     /translation="MSYQALYRVFRPQRFEDVVGQEHITKTLQNALLQKKFSHAYLFS
                     GPRGTGKTSAAKIFAKAVNCEHAPVDEPCNECAACKGITNGSISDVIEIDAASNNGVD
                     EIRDIRDKVKFAPSAVTYKVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTEPH
                     KIPLTIISRCQRFDFKRITSQAIVGRMNKIVDAEQLQVEEGSLEIIASAADGGMRDAL
                     SLLDQAISFSGDILKVEDALLITGAVSQLYIGKLAKSLHDKNVSDALETLNELLQQGK
                     DPAKLIEDMIFYFRDMLLYKTAPGLEGVLEKVKVDETFRELSEQIPAQALYEMIDILN
                     KSHQEMKWTNHPRIFFEVAVVKICQTSHQSAADLPEVDMLMKKIQQLEQEVERLKTTG
                     IKAAAESPKKEAPRVPKGGKSNYKAPVGRIHEILKEATRPDLDLLRNSWGKLLAHLKQ
                     QNKVSHAALLNDSEPVAAGSAAFVLKFKYEIHCKMVAEDNNGVRTNLEQILESMLGKR
                     MDLIGVPEAQWGKIREEFLEDHQQENEGSNEPAEEDPLIAEAKKLVGADLIEIKD"
     misc_feature    26814..28502
                     /gene="dnaX"
                     /locus_tag="BSU00190"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated; Region: PRK05563"
                     /db_xref="CDD:235505"
     misc_feature    26868..27329
                     /gene="dnaX"
                     /locus_tag="BSU00190"
                     /note="The AAA+ (ATPases Associated with a wide variety of
                     cellular Activities) superfamily represents an ancient
                     group of ATPases belonging to the ASCE (for additional
                     strand, catalytic E) division of the P-loop NTPase fold.
                     The ASCE division also includes ABC; Region: AAA; cd00009"
                     /db_xref="CDD:99707"
     misc_feature    26946..26969
                     /gene="dnaX"
                     /locus_tag="BSU00190"
                     /note="Walker A motif; other site"
                     /db_xref="CDD:99707"
     misc_feature    order(26949..26972,27189..27191,27282..27284)
                     /gene="dnaX"
                     /locus_tag="BSU00190"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:99707"
     misc_feature    27177..27194
                     /gene="dnaX"
                     /locus_tag="BSU00190"
                     /note="Walker B motif; other site"
                     /db_xref="CDD:99707"
     misc_feature    27318..27320
                     /gene="dnaX"
                     /locus_tag="BSU00190"
                     /note="arginine finger; other site"
                     /db_xref="CDD:99707"
     misc_feature    27567..27947
                     /gene="dnaX"
                     /locus_tag="BSU00190"
                     /note="DNA polymerase III subunits gamma and tau domain
                     III; Region: DNA_pol3_gamma3; pfam12169"
                     /db_xref="CDD:256887"
     gene            28529..28852
                     /gene="yaaK"
                     /locus_tag="BSU00200"
                     /db_xref="GeneID:937027"
     CDS             28529..28852
                     /gene="yaaK"
                     /locus_tag="BSU00200"
                     /function="16.3: Control"
                     /function="16.9: Replicate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 16740939; Product type f: factor"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YaaK"
                     /protein_id="NP_387901.1"
                     /db_xref="GI:16077088"
                     /db_xref="GeneID:937027"
                     /translation="MRGGMGNMQKMMKQMQKMQKDMAKAQEELAEKVVEGTAGGGMVT
                     VKANGQKEILDVIIKEEVVDPEDIDMLQDLVLAATNEALKKVDEITNETMGQFTKGMN
                     MPGLF"
     misc_feature    28538..28849
                     /gene="yaaK"
                     /locus_tag="BSU00200"
                     /note="hypothetical protein; Validated; Region: PRK00153"
                     /db_xref="CDD:234669"
     gene            28867..29463
                     /gene="recR"
                     /locus_tag="BSU00210"
                     /db_xref="GeneID:937197"
     CDS             28867..29463
                     /gene="recR"
                     /locus_tag="BSU00210"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="involved in a recombinational process of DNA
                     repair, independent of the recBC complex"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="NP_387902.1"
                     /db_xref="GI:16077089"
                     /db_xref="GeneID:937197"
                     /translation="MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFA
                     KALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKSVICVVQDPKDVIAMEKMKEYNG
                     QYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
                     KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL"
     misc_feature    28870..29460
                     /gene="recR"
                     /locus_tag="BSU00210"
                     /note="recombination protein RecR; Reviewed; Region: recR;
                     PRK00076"
                     /db_xref="CDD:234616"
     misc_feature    <28873..28962
                     /gene="recR"
                     /locus_tag="BSU00210"
                     /note="Helix-hairpin-helix domain; Region: HHH_8;
                     pfam14716"
                     /db_xref="CDD:258853"
     misc_feature    28978..29100
                     /gene="recR"
                     /locus_tag="BSU00210"
                     /note="RecR protein; Region: RecR; pfam02132"
                     /db_xref="CDD:251108"
     misc_feature    29104..29439
                     /gene="recR"
                     /locus_tag="BSU00210"
                     /note="TOPRIM_recR: topoisomerase-primase (TOPRIM)
                     nucleotidyl transferase/hydrolase domain of the type found
                     in Escherichia coli RecR.  RecR participates in the RecFOR
                     pathway of homologous recombinational repair in
                     prokaryotes. This pathway provides a...; Region:
                     TOPRIM_recR; cd01025"
                     /db_xref="CDD:173775"
     misc_feature    order(29122..29127,29134..29136,29296..29298,29302..29304,
                     29308..29310)
                     /gene="recR"
                     /locus_tag="BSU00210"
                     /note="putative active site [active]"
                     /db_xref="CDD:173775"
     misc_feature    order(29122..29124,29296..29298)
                     /gene="recR"
                     /locus_tag="BSU00210"
                     /note="putative metal-binding site [ion binding]; other
                     site"
                     /db_xref="CDD:173775"
     misc_feature    order(29140..29148,29152..29157,29278..29280,29284..29286,
                     29290..29292,29299..29301,29335..29337,29365..29400,
                     29404..29406,29419..29421,29425..29427,29431..29439)
                     /gene="recR"
                     /locus_tag="BSU00210"
                     /note="tetramer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:173775"
     gene            29481..29705
                     /gene="yaaL"
                     /locus_tag="BSU00220"
                     /db_xref="GeneID:937026"
     CDS             29481..29705
                     /gene="yaaL"
                     /locus_tag="BSU00220"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387903.1"
                     /db_xref="GI:16077090"
                     /db_xref="GeneID:937026"
                     /translation="MGFLRKKTLRREFDEKLTEQLFKQKEEWNRQKKLVEKSLEPSAE
                     VLYELKVAEAKYFFYLREAKQRNLKISRWK"
     misc_feature    29481..29693
                     /gene="yaaL"
                     /locus_tag="BSU00220"
                     /note="Protein of unknown function (DUF2508); Region:
                     DUF2508; pfam10704"
                     /db_xref="CDD:256128"
     gene            29772..30035
                     /gene="bofA"
                     /locus_tag="BSU00230"
                     /db_xref="GeneID:937025"
     CDS             29772..30035
                     /gene="bofA"
                     /locus_tag="BSU00230"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15087499; Product type r:
                     regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-K factor-processing regulator BofA"
                     /protein_id="NP_387904.2"
                     /db_xref="GI:255767016"
                     /db_xref="GeneID:937025"
                     /translation="MEPIFIIGIILGLVILLFLSGSAAKPLKWIGITAVKFVAGALLL
                     VCVNMFGGSLGIHVPINLVTTAISGILGIPGIAALVVIKQFII"
     misc_feature    29829..30029
                     /gene="bofA"
                     /locus_tag="BSU00230"
                     /note="pro-sigmaK processing inhibitor BofA; Region:
                     spore_BofA; TIGR02862"
                     /db_xref="CDD:163046"
     gene            30279..31832
                     /gene="rrnA-16S"
                     /locus_tag="BSU_rRNA_4"
                     /db_xref="GeneID:936895"
     rRNA            30279..31832
                     /gene="rrnA-16S"
                     /locus_tag="BSU_rRNA_4"
                     /product="ribosomal RNA-16S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936895"
     gene            31932..32008
                     /gene="trnA-Ile"
                     /locus_tag="BSU_tRNA_8"
                     /db_xref="GeneID:2914254"
     tRNA            31932..32008
                     /gene="trnA-Ile"
                     /locus_tag="BSU_tRNA_8"
                     /product="tRNA-Ile"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914254"
     gene            32020..32095
                     /gene="trnA-Ala"
                     /locus_tag="BSU_tRNA_9"
                     /db_xref="GeneID:2914217"
     tRNA            32020..32095
                     /gene="trnA-Ala"
                     /locus_tag="BSU_tRNA_9"
                     /product="tRNA-Ala"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914217"
     gene            32177..35103
                     /gene="rrnA-23S"
                     /locus_tag="BSU_rRNA_5"
                     /db_xref="GeneID:936943"
     rRNA            32177..35103
                     /gene="rrnA-23S"
                     /locus_tag="BSU_rRNA_5"
                     /product="ribosomal RNA-23S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936943"
     gene            35237..35355
                     /gene="rrnA-5S"
                     /locus_tag="BSU_rRNA_26"
                     /db_xref="GeneID:2914205"
     rRNA            35237..35355
                     /gene="rrnA-5S"
                     /locus_tag="BSU_rRNA_26"
                     /product="ribosomal RNA-5S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914205"
     gene            35531..35725
                     /gene="csfB"
                     /locus_tag="BSU00240"
                     /db_xref="GeneID:937016"
     CDS             35531..35725
                     /gene="csfB"
                     /locus_tag="BSU00240"
                     /function="16.5: Explore"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15044948, 8759874;
                     Product type cp: cell process"
                     /codon_start=1
                     /transl_table=11
                     /product="sporulation protein CsfB"
                     /protein_id="NP_387905.1"
                     /db_xref="GI:16077092"
                     /db_xref="GeneID:937016"
                     /translation="MDETVKLNHTCVICDQEKNRGIHLYTKFICLDCERKVISTSTSD
                     PDYAFYVKKLKSIHTPPLYS"
     misc_feature    35558..35695
                     /gene="csfB"
                     /locus_tag="BSU00240"
                     /note="Inhibitor of sigma-G Gin; Region: Gin; pfam10764"
                     /db_xref="CDD:204552"
     gene            35845..36459
                     /gene="xpaC"
                     /locus_tag="BSU00250"
                     /db_xref="GeneID:937019"
     CDS             35845..36459
                     /gene="xpaC"
                     /locus_tag="BSU00250"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="5-bromo 4-chloroindolyl phosphate hydrolysis
                     protein XpaC"
                     /protein_id="NP_387906.1"
                     /db_xref="GI:16077093"
                     /db_xref="GeneID:937019"
                     /translation="MQRFFHFLVWSLTSSATFVFIGILSFFGLNQSIFLSIVYGLASG
                     AAVYIAGIWNARRLFLKKHELTGREYAYIKKNLEEARQKMVRLRKALFQAKSIQMFKQ
                     NAEMLRIVRRIYLLTKKEPKRFYQAERFFYQTLDSVVELTEKYAFLSSHPKKSKELSM
                     SLSETRITLTELTKRLEEDLTQAMGDEIDELQFELDAAKHSLKK"
     misc_feature    35845..36456
                     /gene="xpaC"
                     /locus_tag="BSU00250"
                     /note="5-bromo-4-chloroindolyl phosphate hydrolysis
                     protein [General function prediction only]; Region: XpaC;
                     COG4915"
                     /db_xref="CDD:227252"
     gene            36478..37638
                     /gene="yaaN"
                     /locus_tag="BSU00260"
                     /db_xref="GeneID:936551"
     CDS             36478..37638
                     /gene="yaaN"
                     /locus_tag="BSU00260"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function; PubMedId: 12533473"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387907.1"
                     /db_xref="GI:16077094"
                     /db_xref="GeneID:936551"
                     /translation="MNRDQSDLHIDELLADPFGGNIEIPGSEAVKAEKEQVRLVDVLP
                     EENKEKAIQLAGQIDHKNMQSIVLYGSQAQSKLLNFSHDMINHVQKKDVGEIGEILGE
                     LMKKLEQVNPDDLQSKKKGFLARMFGRVSSSLQEVLSKYQKTSVQIDRISLKLEHSKN
                     ALISDNKLLEQLYEKNKEYFAALNVYIAAGELKLEELKTKTIPELKQQAESSDHNQMA
                     VQEVNDLIQFADRLDKRVHDLLLSRQITIQSAPQIRLIQNTNQALAEKIQSSIVTAIP
                     LWKNQVAIALTLLRQRNAVDAQQKVSDTTNELLLKNAELLKTNTIETARANERGLVDI
                     DTLKKVQESLISTLEETLTIQEEGRIKRRQAEEELMMMEGDLKQKLITIKER"
     misc_feature    36496..37635
                     /gene="yaaN"
                     /locus_tag="BSU00260"
                     /note="Uncharacterized protein involved in tellurite
                     resistance [Inorganic ion transport and metabolism];
                     Region: TelA; COG3853"
                     /db_xref="CDD:226371"
     misc_feature    36625..37629
                     /gene="yaaN"
                     /locus_tag="BSU00260"
                     /note="Toxic anion resistance protein (TelA); Region:
                     TelA; pfam05816"
                     /db_xref="CDD:253402"
     gene            37720..39162
                     /gene="yaaO"
                     /locus_tag="BSU00270"
                     /db_xref="GeneID:937013"
     CDS             37720..39162
                     /gene="yaaO"
                     /locus_tag="BSU00270"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 9723923; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387908.1"
                     /db_xref="GI:16077095"
                     /db_xref="GeneID:937013"
                     /translation="MNTPLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLT
                     IDVTELAGLDDLHHPSGVIKEAQELASQLYGSAESFFLVNGTTVGNLAMILSVCEPGD
                     TILVQRNCHKSVFHAVDLSGAEPVYLAPDVDSAMHVPTHVPLGTIKEALEAYPDAKGL
                     VLTNPTYYGHSADLTEIITEAHHYGIPVLVDEAHGAHFILGEPFPVSALKMGADIVVQ
                     SAHKTLPAMTMGSYLHLNSSCRINRDRVAEYLNRLQSSSPSYPIMASLDIARAYVQHI
                     IEEQKLSDILQRIETLKQTFDSLTNAEAVNPANPLIITDPLKLTIRSKRGHSGYTLQS
                     ILERANIFTELADENQVLLVLPLGGKRRINAEIIRSIDEEIEKTPPDQTFVSAEWGVQ
                     PVTVLPYPKKVLHSFKKEYVSFEEAAGRLNAEDIIPYPPGIPMIMAGERITKESVQKL
                     SRLISMKTHVQGNMKIKEKQLLVYIEEEKS"
     misc_feature    37726..39159
                     /gene="yaaO"
                     /locus_tag="BSU00270"
                     /note="Arginine/lysine/ornithine decarboxylases [Amino
                     acid transport and metabolism]; Region: LdcC; COG1982"
                     /db_xref="CDD:224893"
     misc_feature    37729..38613
                     /gene="yaaO"
                     /locus_tag="BSU00270"
                     /note="Ornithine decarboxylase family. This family belongs
                     to pyridoxal phosphate (PLP)-dependent aspartate
                     aminotransferase superfamily (fold I). The major groups in
                     this CD corresponds to ornithine decarboxylase (ODC),
                     arginine decarboxylase (ADC) and lysine...; Region:
                     Orn_deC_like; cd00615"
                     /db_xref="CDD:99739"
     misc_feature    order(37855..37857,37867..37869,37891..37893,37966..37974,
                     37978..37983,37990..37992,38002..38010,38014..38019,
                     38050..38055,38380..38385,38392..38406,38461..38466,
                     38470..38478,38482..38484,38503..38505,38512..38514,
                     38521..38523,38560..38565)
                     /gene="yaaO"
                     /locus_tag="BSU00270"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:99739"
     misc_feature    order(37972..37980,38050..38052,38056..38058,38206..38208,
                     38290..38292,38296..38301,38374..38376,38380..38385)
                     /gene="yaaO"
                     /locus_tag="BSU00270"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:99739"
     misc_feature    38383..38385
                     /gene="yaaO"
                     /locus_tag="BSU00270"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99739"
     misc_feature    <38947..>39057
                     /gene="yaaO"
                     /locus_tag="BSU00270"
                     /note="Orn/Lys/Arg decarboxylase, C-terminal domain;
                     Region: OKR_DC_1_C; pfam03711"
                     /db_xref="CDD:112521"
     gene            39159..39797
                     /gene="tmk"
                     /locus_tag="BSU00280"
                     /db_xref="GeneID:937018"
     CDS             39159..39797
                     /gene="tmk"
                     /locus_tag="BSU00280"
                     /EC_number="2.7.4.9"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the reversible phosphoryl transfer from
                     adenosine triphosphate (ATP) to thymidine monophosphate
                     (dTMP) to form thymidine diphosphate (dTDP)"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate kinase"
                     /protein_id="NP_387909.2"
                     /db_xref="GI:255767017"
                     /db_xref="GeneID:937018"
                     /translation="MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGID
                     IAEQIREVILNENNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSL
                     AYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLE
                     KLDFHTKVQEGYQELMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKKIQL"
     misc_feature    39159..39782
                     /gene="tmk"
                     /locus_tag="BSU00280"
                     /note="thymidylate kinase; Validated; Region: tmk;
                     PRK00698"
                     /db_xref="CDD:234814"
     misc_feature    39168..39773
                     /gene="tmk"
                     /locus_tag="BSU00280"
                     /note="Thymidine monophosphate kinase (TMPK), also known
                     as thymidylate kinase, catalyzes the phosphorylation of
                     thymidine monophosphate (TMP) to thymidine diphosphate
                     (TDP) utilizing ATP as its preferred phophoryl donor. TMPK
                     represents the rate-limiting step...; Region: TMPK;
                     cd01672"
                     /db_xref="CDD:238835"
     misc_feature    order(39207..39209,39366..39368,39378..39380,39441..39446,
                     39468..39470,39603..39605)
                     /gene="tmk"
                     /locus_tag="BSU00280"
                     /note="TMP-binding site; other site"
                     /db_xref="CDD:238835"
     misc_feature    order(39210..39212,39591..39593,39720..39722)
                     /gene="tmk"
                     /locus_tag="BSU00280"
                     /note="ATP-binding site [chemical binding]; other site"
                     /db_xref="CDD:238835"
     gene            39871..40200
                     /gene="yaaQ"
                     /locus_tag="BSU00290"
                     /db_xref="GeneID:938610"
     CDS             39871..40200
                     /gene="yaaQ"
                     /locus_tag="BSU00290"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function; PubMedId: 10913081"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387910.1"
                     /db_xref="GI:16077097"
                     /db_xref="GeneID:938610"
                     /translation="MKLIVAVVQDQDSNRLLKTLTDHNFRVTKLATTGGFLKSGNTTF
                     MIGVEDIRVNKALSLIKENGQKRDQMIAPVSPMGGNADSYVPYPVEVEVGGATVFVLP
                     VDEFHQF"
     misc_feature    39871..40197
                     /gene="yaaQ"
                     /locus_tag="BSU00290"
                     /note="Uncharacterized protein conserved in bacteria
                     [Function unknown]; Region: COG3870"
                     /db_xref="CDD:226388"
     gene            40213..40653
                     /gene="yaaR"
                     /locus_tag="BSU00300"
                     /db_xref="GeneID:936756"
     CDS             40213..40653
                     /gene="yaaR"
                     /locus_tag="BSU00300"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387911.1"
                     /db_xref="GI:16077098"
                     /db_xref="GeneID:936756"
                     /translation="MKINKDIRTFIDNKQIPSVKTSEITASFKTSMENQSSKMKLDQL
                     TRLLSDIEAFGKRLTKSRNFKDLARFKGLVKRFVKEAVDSGLSHETSKSFDLYGNSRT
                     LGLVKEIDDKLIQLTEEMMDQEKPAIDLLERIGEIKGLLINLYT"
     misc_feature    40213..40650
                     /gene="yaaR"
                     /locus_tag="BSU00300"
                     /note="Uncharacterized protein conserved in bacteria
                     [Function unknown]; Region: COG1728"
                     /db_xref="CDD:224642"
     gene            40665..41654
                     /gene="holB"
                     /locus_tag="BSU00310"
                     /db_xref="GeneID:935949"
     CDS             40665..41654
                     /gene="holB"
                     /locus_tag="BSU00310"
                     /EC_number="2.7.7.7"
                     /function="16.9: Replicate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the DNA-template-directed extension of
                     the 3'-end of a DNA strand; the delta' subunit seems to
                     interact with the gamma subunit to transfer the beta
                     subunit on the DNA"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="NP_387912.1"
                     /db_xref="GI:16077099"
                     /db_xref="GeneID:935949"
                     /translation="MAISWKEMNELQPRVMKLLYNSIEKDRLSHAYLFEGKKGTGKLD
                     AALLLAKSFFCLEGGAEPCESCRNCKRIESGNHPDLHLVQPDGLSIKKAQIQALQEEF
                     SKTGLESHKKLYIISHADQMTANAANSLLKFLEEPNKDTMAVLITEQPQRLLDTIISR
                     CQTLPFQPLQPKAIEDRLIEQDVSPHMARLLANMTNNVAEAVELSRNDEFAESRAKVI
                     KLYEVLHQRKGHAFFFIQDQWMPFFKEKTHQEMGLDMLLLIYRDVLSIQIGNEDKLIY
                     QDLFQSIKQHALQSTQQSVTNQILAVLEAKKRLHSNVNVQGLMEHLVLMLQEG"
     misc_feature    40668..41651
                     /gene="holB"
                     /locus_tag="BSU00310"
                     /note="DNA polymerase III subunit delta'; Validated;
                     Region: PRK08058"
                     /db_xref="CDD:181214"
     misc_feature    <41004..>41219
                     /gene="holB"
                     /locus_tag="BSU00310"
                     /note="DNA polymerase III subunit delta'; Validated;
                     Region: PRK08485"
                     /db_xref="CDD:236274"
     gene            41657..42484
                     /gene="yaaT"
                     /locus_tag="BSU00320"
                     /db_xref="GeneID:937012"
     CDS             41657..42484
                     /gene="yaaT"
                     /locus_tag="BSU00320"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function; PubMedId: 12270811"
                     /codon_start=1
                     /transl_table=11
                     /product="stage 0 sporulation protein YaaT"
                     /protein_id="NP_387913.1"
                     /db_xref="GI:16077100"
                     /db_xref="GeneID:937012"
                     /translation="MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQV
                     VIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQEALSAFDICQKKVIEHGLDMKL
                     VDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
                     CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQ
                     LPDIGEMITTANGPAKVVGLNILERVLQVELINREKVIEYTWEELLEEGVVSAQTTD"
     misc_feature    41657..42451
                     /gene="yaaT"
                     /locus_tag="BSU00320"
                     /note="Uncharacterized homolog of PSP1 [Function unknown];
                     Region: COG1774"
                     /db_xref="CDD:224688"
     gene            42499..42858
                     /gene="yabA"
                     /locus_tag="BSU00330"
                     /db_xref="GeneID:937008"
     CDS             42499..42858
                     /gene="yabA"
                     /locus_tag="BSU00330"
                     /function="16.9: Replicate"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="in Bacillus subtilis this protein is involved in
                     the negative regulation of DNA replication initiation;
                     interacts with DnaN and DnaA"
                     /codon_start=1
                     /transl_table=11
                     /product="initiation-control protein YabA"
                     /protein_id="NP_387914.1"
                     /db_xref="GI:16077101"
                     /db_xref="GeneID:937008"
                     /translation="MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLE
                     NKHLRKRLDDTTQQIEKFKADKKESKTQKTEQTDIGEGYDNLARLYQEGFHICNVHYG
                     SVRKEDCLFCLSFLNKK"
     misc_feature    42499..42855
                     /gene="yabA"
                     /locus_tag="BSU00330"
                     /note="DNA replication intiation control protein YabA;
                     Reviewed; Region: PRK13169"
                     /db_xref="CDD:183876"
     gene            42917..43660
                     /gene="yabB"
                     /locus_tag="BSU00340"
                     /db_xref="GeneID:937011"
     CDS             42917..43660
                     /gene="yabB"
                     /locus_tag="BSU00340"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387915.1"
                     /db_xref="GI:16077102"
                     /db_xref="GeneID:937011"
                     /translation="MVSLHDDERLDYLLAEDMKIIQSPTVFAFSLDAVLLSKFAYVPI
                     QKGKIVDLCTGNGIVPLLLSTRSKADILGVEIQERLHDMAVRSVEYNKLDDQIQIIHD
                     DLKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCTLEDVISVSSK
                     LLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPKQGKEANTILVEGIKGGRP
                     DLKILPPLFVYDEQNEYTKEIRTILYGDK"
     misc_feature    42926..43651
                     /gene="yabB"
                     /locus_tag="BSU00340"
                     /note="Predicted O-methyltransferase [General function
                     prediction only]; Region: COG4123"
                     /db_xref="CDD:226608"
     misc_feature    43058..43429
                     /gene="yabB"
                     /locus_tag="BSU00340"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cd02440"
                     /db_xref="CDD:100107"
     misc_feature    order(43070..43090,43139..43144,43220..43228,43280..43282)
                     /gene="yabB"
                     /locus_tag="BSU00340"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     gene            43647..43946
                     /gene="yazA"
                     /locus_tag="BSU00350"
                     /db_xref="GeneID:937002"
     CDS             43647..43946
                     /gene="yazA"
                     /locus_tag="BSU00350"
                     /function="16.6: Maintain"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 11483577; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387916.1"
                     /db_xref="GI:16077103"
                     /db_xref="GeneID:937002"
                     /translation="METNNHFFYVVKCKDNSWYAGYTNDLHKRVKTHNDGKGAKYTKV
                     RRPVELIFAESFSTKREAMQAEYYFKKLTRKKKELYIEEKRNSKEAVYVKAPNEL"
     misc_feature    43662..43865
                     /gene="yazA"
                     /locus_tag="BSU00350"
                     /note="The GIY-YIG domain of uncharacterized protein
                     family UPF0213 related to structure-specific endonuclease
                     SLX1; Region: GIY-YIG_UPF0213; cd10456"
                     /db_xref="CDD:198403"
     misc_feature    order(43665..43673,43701..43709)
                     /gene="yazA"
                     /locus_tag="BSU00350"
                     /note="GIY-YIG motif/motif A; other site"
                     /db_xref="CDD:198403"
     misc_feature    order(43671..43673,43701..43703,43707..43709,43731..43733,
                     43743..43745,43842..43844)
                     /gene="yazA"
                     /locus_tag="BSU00350"
                     /note="putative active site [active]"
                     /db_xref="CDD:198403"
     misc_feature    43842..43844
                     /gene="yazA"
                     /locus_tag="BSU00350"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:198403"
     gene            43921..44799
                     /gene="yabC"
                     /locus_tag="BSU00360"
                     /db_xref="GeneID:937010"
     CDS             43921..44799
                     /gene="yabC"
                     /locus_tag="BSU00360"
                     /function="16.8: Protect"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 16014871; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal RNA small subunit methyltransferase I"
                     /protein_id="NP_387917.1"
                     /db_xref="GI:16077104"
                     /db_xref="GeneID:937010"
                     /translation="MLRRQMSFNGKSDMGILYLVPTPIGNLEDMTFRAIDTLKSVDAI
                     AAEDTRQTKKLCHVYEIETPLVSYHEHNKESSGHKIIEWLKSGKNIALVSDAGLPTIS
                     DPGAEIVKDFTDIGGYVVPLPGANAALTALIASGIVPQPFFFYGFLNRQKKEKKKELE
                     ALKKRQETIIFYEAPHRLKETLSAMAEILGDREIAVTRELTKKYEEFIRGTISEVIGW
                     ANEDQIRGEFCLVVEGSNNEEVDEEEQWWETLTAKEHVEHYISKGATSKEAIKKAAVD
                     RNVPKREVYDAYHIKQ"
     misc_feature    43969..44622
                     /gene="yabC"
                     /locus_tag="BSU00360"
                     /note="Ribosomal RNA small subunit methyltransferase I,
                     also known as rRNA (cytidine-2'-O-)-methyltransferase
                     RsmI; Region: RsmI; cd11648"
                     /db_xref="CDD:212507"
     misc_feature    order(43990..43992,44206..44214,44221..44226,44296..44301,
                     44434..44436,44509..44511,44515..44520,44599..44607)
                     /gene="yabC"
                     /locus_tag="BSU00360"
                     /note="putative SAM binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:212507"
     misc_feature    order(44008..44019,44023..44025,44212..44229,44236..44241,
                     44245..44250,44281..44283,44287..44298,44302..44307,
                     44314..44319,44344..44358)
                     /gene="yabC"
                     /locus_tag="BSU00360"
                     /note="putative homodimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:212507"
     gene            complement(44848..45138)
                     /gene="abrB"
                     /locus_tag="BSU00370"
                     /db_xref="GeneID:937009"
     CDS             complement(44848..45138)
                     /gene="abrB"
                     /locus_tag="BSU00370"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 16159768, 16223496,
                     16702211, 10754235, 10809710, 11101881, 11101897; Product
                     type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="transition state regulatory protein AbrB"
                     /protein_id="NP_387918.1"
                     /db_xref="GI:16077105"
                     /db_xref="GeneID:937009"
                     /translation="MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEK
                     IILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEGAEQIISEIQNQLQNLK"
     misc_feature    complement(44863..45132)
                     /gene="abrB"
                     /locus_tag="BSU00370"
                     /note="Regulators of stationary/sporulation gene
                     expression [Transcription]; Region: AbrB; COG2002"
                     /db_xref="CDD:224913"
     gene            45633..47627
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /db_xref="GeneID:936877"
     CDS             45633..47627
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /EC_number="6.1.1.10"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="methionine--tRNA ligase; MetRS; adds methionine to
                     tRNA(Met) with cleavage of ATP to AMP and diphosphate;
                     some MetRS enzymes form dimers depending on a C-terminal
                     domain that is also found in other proteins such as
                     Trbp111 in Aquifex aeolicus and the cold-shock protein
                     CsaA from Bacillus subtilis while others do not; four
                     subfamilies exist based on sequence motifs and zinc
                     content"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="NP_387919.1"
                     /db_xref="GI:16077106"
                     /db_xref="GeneID:936877"
                     /translation="MPQENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGF
                     DVRYLTGTDEHGQKIQQKAEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKR
                     HKVVIEKVFQKLLDNGDIYLDEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPD
                     SGHPVELIKEESYFFRMGKYADRLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAV
                     SRTTFDWGVKVPENPKHVVYVWIDALFNYLTALGYDTENDELYQKYWPADVHLVGKEI
                     VRFHTIYWPIMLMALDLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVTLIERYGLDEL
                     RYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNLLNRTVAMINKYFDGQIGSYKGA
                     VTEFDHTLTSVAEETVKAYEKAMENMEFSVALSTLWQLISRTNKYIDETAPWVLAKDP
                     AKEEELRSVMYHLAESLRISAVLLQPFLTKTPEKMFEQLGITDESLKAWDSITAFGQL
                     KDTKVQKGEPLFPRLEAEEEIAYIKGKMQGSAPAKEETKEEEPQEVDRLPEITIDQFM
                     DVELRVAEVIEAEPVKKADRLLKLQLDLGFEKRQVVSGIAKHYTPEELVGKKLVCVTN
                     LKPVKLRGELSQGMILAGEADGVLKVVSIDQSLPKGTRIK"
     misc_feature    45639..47624
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="methionyl-tRNA synthetase; Reviewed; Region:
                     PRK12267"
                     /db_xref="CDD:237028"
     misc_feature    45651..46682
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="catalytic core domain of methioninyl-tRNA
                     synthetases; Region: MetRS_core; cd00814"
                     /db_xref="CDD:173907"
     misc_feature    order(45669..45674,45678..45680,45789..45791,46350..46352,
                     46359..46364,46371..46373,46458..46460,46470..46472)
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="active site"
                     /db_xref="CDD:173907"
     misc_feature    45696..45707
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="HIGH motif; other site"
                     /db_xref="CDD:173907"
     misc_feature    46563..46577
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="KMSKS motif; other site"
                     /db_xref="CDD:173907"
     misc_feature    46707..47099
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="Anticodon-binding domain of methionyl tRNA
                     synthetases; Region: Anticodon_Ia_Met; cd07957"
                     /db_xref="CDD:153411"
     misc_feature    order(46710..46712,46731..46736,46743..46748,46755..46760,
                     46767..46772,46779..46784,46935..46940,46944..46949,
                     46962..46964)
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="tRNA binding surface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:153411"
     misc_feature    order(46731..46733,46743..46748,46755..46760,46767..46772,
                     46779..46784,46944..46946,46962..46964)
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="anticodon binding site; other site"
                     /db_xref="CDD:153411"
     misc_feature    47310..47624
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="tRNA-binding-domain-containing Escherichia coli
                     methionyl-tRNA synthetase (EcMetRS)-like proteins.  This
                     family includes EcMetRS and Aquifex aeolicus Trbp111
                     (AaTrbp111). This domain has general tRNA binding
                     properties.  MetRS aminoacylates methionine...; Region:
                     tRNA_bind_EcMetRS_like; cd02800"
                     /db_xref="CDD:239199"
     misc_feature    order(47313..47315,47454..47456,47502..47510,47517..47519,
                     47553..47564,47580..47582,47586..47588,47592..47594,
                     47601..47603,47613..47624)
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:239199"
     misc_feature    order(47388..47390,47424..47426,47502..47504,47514..47516,
                     47535..47537,47544..47546)
                     /gene="metS"
                     /locus_tag="BSU00380"
                     /note="putative tRNA-binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:239199"
     gene            47706..48473
                     /gene="yabD"
                     /locus_tag="BSU00390"
                     /db_xref="GeneID:936949"
     CDS             47706..48473
                     /gene="yabD"
                     /locus_tag="BSU00390"
                     /EC_number="3.1.21.-"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 10747959, 16014871; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease YabD"
                     /protein_id="NP_387920.1"
                     /db_xref="GI:16077107"
                     /db_xref="GeneID:936949"
                     /translation="MLFDTHAHLNAEQYDTDLEEVIERAKAEKVERIVVVGFDRPTIT
                     RAMEMIEEYDFIYAAIGWHPVDAIDMTEEDLAWIKELSAHEKVVAIGEMGLDYHWDKS
                     PKDIQKEVFRNQIALAKEVNLPIIIHNRDATEDVVTILKEEGAEAVGGIMHCFTGSAE
                     VARECMKMNFYLSFGGPVTFKNAKKPKEVVKEIPNDRLLIETDCPFLTPHPFRGKRNE
                     PSYVKYVAEQIAELKEMTFEEIASITTENAKRLFRIN"
     misc_feature    47706..48470
                     /gene="yabD"
                     /locus_tag="BSU00390"
                     /note="Predicted metal-dependent hydrolases with the
                     TIM-barrel fold [General function prediction only];
                     Region: COG1099"
                     /db_xref="CDD:224024"
     misc_feature    47709..48464
                     /gene="yabD"
                     /locus_tag="BSU00390"
                     /note="TatD like proteins;  E.coli TatD is a cytoplasmic
                     protein, shown to have magnesium dependent DNase activity;
                     Region: TatD_DNAse; cd01310"
                     /db_xref="CDD:238635"
     misc_feature    order(47721..47723,47727..47729,48087..48089,48162..48164,
                     48312..48314)
                     /gene="yabD"
                     /locus_tag="BSU00390"
                     /note="active site"
                     /db_xref="CDD:238635"
     gene            48629..49942
                     /gene="yabE"
                     /locus_tag="BSU00400"
                     /db_xref="GeneID:936891"
     CDS             48629..49942
                     /gene="yabE"
                     /locus_tag="BSU00400"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15774001, 19047346; Product type pe:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387921.1"
                     /db_xref="GI:16077108"
                     /db_xref="GeneID:936891"
                     /translation="MGEREGRVDSLLDTLYNLSEEKEAFFITQKMKKLFSVKLSKSKV
                     ILVAACLLLAGSGTAYAAHELTKQSVSVSINGKKKHIRTHANTVGDLLETLDIKTRDE
                     DKITPAKQTKITADMDVVYEAAKPVKLTINGEEKTLWSTAKTVGALLDEQDVDVKEQD
                     QIDPAIDTDISKDMKINIEPAFQVTVNDAGKQKKIWTTSTTVADFLKQQKMNIKDEDK
                     IKPALDAKLTKGKADITITRIEKVTDVVEEKIAFDVKKQEDASLEKGKEKVVQKGKEG
                     KLKKHFEVVKENGKEVSRELVKEETAEQSKDKVIAVGTKQSSPKFETVSASGDSKTVV
                     SRSNESTGKVMTVSSTAYTASCSGCSGHTATGVNLKNNPNAKVIAVDPNVIPLGSKVH
                     VEGYGYAIAADTGSAIKGNKIDVFFPEKSSAYRWGNKTVKIKILN"
     misc_feature    48719..49648
                     /gene="yabE"
                     /locus_tag="BSU00400"
                     /note="Uncharacterized protein conserved in bacteria
                     [Function unknown]; Region: COG3583"
                     /db_xref="CDD:226111"
     misc_feature    48833..48961
                     /gene="yabE"
                     /locus_tag="BSU00400"
                     /note="Domain of unknown function (DUF348); Region:
                     DUF348; pfam03990"
                     /db_xref="CDD:252299"
     misc_feature    49004..49132
                     /gene="yabE"
                     /locus_tag="BSU00400"
                     /note="Domain of unknown function (DUF348); Region:
                     DUF348; pfam03990"
                     /db_xref="CDD:252299"
     misc_feature    49175..49303
                     /gene="yabE"
                     /locus_tag="BSU00400"
                     /note="Domain of unknown function (DUF348); Region:
                     DUF348; pfam03990"
                     /db_xref="CDD:252299"
     misc_feature    49343..49576
                     /gene="yabE"
                     /locus_tag="BSU00400"
                     /note="G5 domain; Region: G5; pfam07501"
                     /db_xref="CDD:254241"
     misc_feature    49613..49933
                     /gene="yabE"
                     /locus_tag="BSU00400"
                     /note="Uncharacterized protein conserved in bacteria
                     [Function unknown]; Region: COG3584"
                     /db_xref="CDD:226112"
     gene            50087..50647
                     /gene="rnmV"
                     /locus_tag="BSU00410"
                     /db_xref="GeneID:937001"
     CDS             50087..50647
                     /gene="rnmV"
                     /locus_tag="BSU00410"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11233981, 11976317,
                     12794188, 16077031; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease M5"
                     /protein_id="NP_387922.1"
                     /db_xref="GI:16077109"
                     /db_xref="GeneID:937001"
                     /translation="MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRL
                     AQKTRGVIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASVES
                     IRACLENVHEEMEAQPSDISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQK
                     RLQMFQIKKSDFMSALDTVMREEQNE"
     misc_feature    50090..50617
                     /gene="rnmV"
                     /locus_tag="BSU00410"
                     /note="ribonuclease M5; Region: 5S_RNA_mat_M5; TIGR00334"
                     /db_xref="CDD:232924"
     misc_feature    50093..50326
                     /gene="rnmV"
                     /locus_tag="BSU00410"
                     /note="TOPRIM_ RNase M5_like: The topoisomerase-primase
                     (TOPRIM) nucleotidyl transferase/hydrolase domain found in
                     Ribonuclease M5: (RNase M5) and other small primase-like
                     proteins from bacteria and archaea.  RNase M5 catalyzes
                     the maturation of 5S rRNA in low...; Region:
                     TOPRIM_RNase_M5_like; cd01027"
                     /db_xref="CDD:173777"
     misc_feature    order(50114..50119,50126..50128,50252..50254,50258..50260,
                     50264..50266)
                     /gene="rnmV"
                     /locus_tag="BSU00410"
                     /note="putative active site [active]"
                     /db_xref="CDD:173777"
     misc_feature    order(50114..50116,50252..50254)
                     /gene="rnmV"
                     /locus_tag="BSU00410"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:173777"
     misc_feature    50360..50614
                     /gene="rnmV"
                     /locus_tag="BSU00410"
                     /note="Domain of unknown function (DUF4093); Region:
                     DUF4093; pfam13331"
                     /db_xref="CDD:257661"
     gene            50640..51518
                     /gene="ksgA"
                     /locus_tag="BSU00420"
                     /db_xref="GeneID:936358"
     CDS             50640..51518
                     /gene="ksgA"
                     /locus_tag="BSU00420"
                     /EC_number="2.1.1.-"
                     /function="16.8: Protect"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the transfer of a total of four methyl
                     groups from S-adenosyl-l-methionine (S-AdoMet) to two
                     adjacent adenosine bases A1518 and A1519 in 16S rRNA;
                     mutations in ksgA causes resistance to the translation
                     initiation inhibitor kasugamycin"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal RNA small subunit methyltransferase A"
                     /protein_id="NP_387923.1"
                     /db_xref="GI:16077110"
                     /db_xref="GeneID:936358"
                     /translation="MNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILNRIVDHA
                     EVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLSPYENVTVIHQD
                     VLKADVKSVIEEQFQDCDEIMVVANLPYYVTTPIIMKLLEEHLPLKGIVVMLQKEVAE
                     RMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGPAVDV
                     ENESFFFQLIKASFAQRRKTLLNNLVNNLPEGKAQKSTIEQVLEETNIDGKRRGESLS
                     IEEFAALSNGLYKALF"
     misc_feature    50793..51104
                     /gene="ksgA"
                     /locus_tag="BSU00420"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cd02440"
                     /db_xref="CDD:100107"
     misc_feature    order(50802..50822,50868..50873,50940..50948,51018..51020)
                     /gene="ksgA"
                     /locus_tag="BSU00420"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     gene            51680..52552
                     /gene="yabG"
                     /locus_tag="BSU00430"
                     /db_xref="GeneID:937005"
     CDS             51680..52552
                     /gene="yabG"
                     /locus_tag="BSU00430"
                     /function="16.5: Explore"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10714992, 11040425,
                     16751597, 19060142; Product type cp: cell process"
                     /codon_start=1
                     /transl_table=11
                     /product="sporulation-specific protease YabG"
                     /protein_id="NP_387924.1"
                     /db_xref="GI:16077111"
                     /db_xref="GeneID:937005"
                     /translation="MQFQIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRL
                     IADSDFSDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQHQE
                     HYFHMPGKVLHLDGDEAYLKKCLNVYKKIGVPVYGIHCHEKKMSASIEVLLDKYRPDI
                     LVITGHDAYSKQKGGIDDLNAYRHSKHFVETVQTARKKIPHLDQLVIFAGACQSHFES
                     LIRAGANFASSPSRVNIHALDPVYIVAKISFTPFMERINVWEVLRNTLTREKGLGGIE
                     TRGVLRIGMPYKSN"
     misc_feature    51689..52540
                     /gene="yabG"
                     /locus_tag="BSU00430"
                     /note="sporulation peptidase YabG; Region: spore_yabG;
                     TIGR02855"
                     /db_xref="CDD:234032"
     gene            52763..53023
                     /gene="veg"
                     /locus_tag="BSU00440"
                     /db_xref="GeneID:936744"
     CDS             52763..53023
                     /gene="veg"
                     /locus_tag="BSU00440"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function; PubMedId: 12761295"
                     /codon_start=1
                     /transl_table=11
                     /product="protein Veg"
                     /protein_id="NP_387925.1"
                     /db_xref="GI:16077112"
                     /db_xref="GeneID:936744"
                     /translation="MAKTLSDIKRSLDGNLGKRLTLKANGGRRKTIERSGILAETYPS
                     VFVIQLDQDENSFERVSYSYADILTETVELTFNDDAASSVAF"
     misc_feature    52763..52990
                     /gene="veg"
                     /locus_tag="BSU00440"
                     /note="Protein of unknown function (DUF1021); Region:
                     DUF1021; pfam06257"
                     /db_xref="CDD:253644"
     gene            53183..53368
                     /gene="sspF"
                     /locus_tag="BSU00450"
                     /db_xref="GeneID:936996"
     CDS             53183..53368
                     /gene="sspF"
                     /locus_tag="BSU00450"
                     /function="16.5: Explore"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11092849, 7959056,
                     8982008; Product type cp: cell process"
                     /codon_start=1
                     /transl_table=11
                     /product="small acid-soluble spore protein SspF"
                     /protein_id="NP_387926.1"
                     /db_xref="GI:16077113"
                     /db_xref="GeneID:936996"
                     /translation="MGRRRGVMSDEFKYELAKDLGFYDTVKNGGWGEIRARDAGNMVK
                     RAIEIAEQQMAQNQNNR"
     misc_feature    53210..53347
                     /gene="sspF"
                     /locus_tag="BSU00450"
                     /note="Small, acid-soluble spore proteins, alpha/beta
                     type; Region: SASP; pfam00269"
                     /db_xref="CDD:249731"
     gene            53516..54385
                     /gene="ipk"
                     /locus_tag="BSU00460"
                     /db_xref="GeneID:936970"
     CDS             53516..54385
                     /gene="ipk"
                     /locus_tag="BSU00460"
                     /EC_number="2.7.1.148"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="An essential enzyme in the nonmevalonate pathway of
                     isopentenyl diphosphate and dimethylallyl diphosphate
                     biosynthesis"
                     /codon_start=1
                     /transl_table=11
                     /product="4-diphosphocytidyl-2-c-methyl-d-erythritol
                     kinase"
                     /protein_id="NP_387927.1"
                     /db_xref="GI:16077114"
                     /db_xref="GeneID:936970"
                     /translation="MRILEKAPAKINLSLDVTRKRPDGYHEVEMIMTTIDLADRIELT
                     ELAEDEVRVSSHNRFVPDDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGG
                     SSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTALATGRGEKIKHIST
                     PPHCWVILAKPTIGVSTAEVYRALKLDGIEHPDVQGMIEAIEEKSFQKMCSRLGNVLE
                     SVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQV
                     YAVRMIGEQNALD"
     misc_feature    53516..54373
                     /gene="ipk"
                     /locus_tag="BSU00460"
                     /note="4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;
                     Provisional; Region: ipk; PRK00128"
                     /db_xref="CDD:234652"
     misc_feature    53771..53947
                     /gene="ipk"
                     /locus_tag="BSU00460"
                     /note="GHMP kinases N terminal domain; Region:
                     GHMP_kinases_N; pfam00288"
                     /db_xref="CDD:249743"
     misc_feature    54104..54340
                     /gene="ipk"
                     /locus_tag="BSU00460"
                     /note="GHMP kinases C terminal; Region: GHMP_kinases_C;
                     pfam08544"
                     /db_xref="CDD:254869"
     gene            54441..55298
                     /gene="purR"
                     /locus_tag="BSU00470"
                     /db_xref="GeneID:937000"
     CDS             54441..55298
                     /gene="purR"
                     /locus_tag="BSU00470"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11591660, 12837783,
                     12837784, 15629952, 16163456; Product type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="Pur operon repressor"
                     /protein_id="NP_387928.1"
                     /db_xref="GI:16077115"
                     /db_xref="GeneID:937000"
                     /translation="MKFRRSGRLVDLTNYLLTHPHELIPLTFFSERYESAKSSISEDL
                     TIIKQTFEQQGIGTLLTVPGAAGGVKYIPKMKQAEAEEFVQTLGQSLANPERILPGGY
                     VYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVR
                     KDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINL
                     LDEFNANVAGIGVLVEAEGVDERLVDEYMSLLTLSTINMKEKSIEIQNGNFLRFFKDN
                     LLKNGETES"
     misc_feature    54441..55253
                     /gene="purR"
                     /locus_tag="BSU00470"
                     /note="pur operon repressor; Provisional; Region:
                     PRK09213"
                     /db_xref="CDD:236414"
     misc_feature    54450..54659
                     /gene="purR"
                     /locus_tag="BSU00470"
                     /note="Bacterial purine repressor, N-terminal; Region:
                     PuR_N; pfam09182"
                     /db_xref="CDD:255220"
     misc_feature    54792..55166
                     /gene="purR"
                     /locus_tag="BSU00470"
                     /note="Phosphoribosyl transferase (PRT)-type I domain;
                     Region: PRTases_typeI; cd06223"
                     /db_xref="CDD:206754"
     misc_feature    order(54852..54854,54858..54860,55047..55055,55059..55073,
                     55143..55145)
                     /gene="purR"
                     /locus_tag="BSU00470"
                     /note="active site"
                     /db_xref="CDD:206754"
     gene            55295..55672
                     /gene="yabJ"
                     /locus_tag="BSU00480"
                     /db_xref="GeneID:936988"
     CDS             55295..55672
                     /gene="yabJ"
                     /locus_tag="BSU00480"
                     /function="16.3: Control"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 12515541, 14729707, 10557275,
                     10919400, 10368157; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="enamine/imine deaminase"
                     /protein_id="NP_387929.1"
                     /db_xref="GI:16077116"
                     /db_xref="GeneID:936988"
                     /translation="MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNG
                     DIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPAR
                     SCVEVARLPKDALVEIEVIALVK"
     misc_feature    55343..55660
                     /gene="yabJ"
                     /locus_tag="BSU00480"
                     /note="YjgF, YER057c, and UK114 belong to a large family
                     of proteins present in bacteria, archaea, and eukaryotes
                     with no definitive function. The conserved domain is
                     similar in structure to chorismate mutase but there is no
                     sequence similarity and no...; Region:
                     YjgF_YER057c_UK114_family; cd00448"
                     /db_xref="CDD:100004"
     misc_feature    order(55343..55348,55355..55357,55361..55363,55370..55372,
                     55376..55378,55382..55387,55502..55504,55508..55513,
                     55517..55519,55523..55525,55556..55558,55565..55567,
                     55592..55615,55643..55645,55649..55651,55655..55657)
                     /gene="yabJ"
                     /locus_tag="BSU00480"
                     /note="homotrimer interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:100004"
     misc_feature    order(55343..55345,55544..55546,55556..55558,55598..55600,
                     55643..55645)
                     /gene="yabJ"
                     /locus_tag="BSU00480"
                     /note="putative active site [active]"
                     /db_xref="CDD:100004"
     gene            55866..56159
                     /gene="spoVG"
                     /locus_tag="BSU00490"
                     /db_xref="GeneID:936959"
     CDS             55866..56159
                     /gene="spoVG"
                     /locus_tag="BSU00490"
                     /function="16.13: Shape"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="stage V sporulation protein G; essential for spore
                     formation and a negative regulator of asymmetric septation
                     in Bacillus; involved in methicillin-resistance, biofilm
                     formation and capsular polysaccharide synthesis in
                     Staphylococcus"
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein SpoVG"
                     /protein_id="NP_387930.1"
                     /db_xref="GI:16077117"
                     /db_xref="GeneID:936959"
                     /translation="MEVTDVRLRRVNTDGRMRAIASITLDHEFVVHDIRVIDGNNGLF
                     VAMPSKRTPDGEFRDITHPINSSTRGKIQDAVLNEYHRLGDTEALEFEEAGAS"
     misc_feature    55866..56156
                     /gene="spoVG"
                     /locus_tag="BSU00490"
                     /note="regulatory protein SpoVG; Reviewed; Region:
                     PRK13259"
                     /db_xref="CDD:237321"
     gene            56352..57722
                     /gene="glmU"
                     /locus_tag="BSU00500"
                     /db_xref="GeneID:936139"
     CDS             56352..57722
                     /gene="glmU"
                     /locus_tag="BSU00500"
                     /EC_number="2.7.7.23"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="forms a homotrimer; catalyzes the acetylation of
                     glucosamine-1-phosphate and uridylation of
                     N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc;
                     function in cell wall synthesis"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional N-acetylglucosamine-1-phosphate
                     uridyltransferase/glucosamine-1-phosphate
                     acetyltransferase"
                     /protein_id="NP_387931.1"
                     /db_xref="GI:16077118"
                     /db_xref="GeneID:936139"
                     /translation="MDKRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDEALKL
                     SLSKLVTIVGHGAEEVKKQLGDKSEYALQAKQLGTAHAVKQAQPFLADEKGVTIVICG
                     DTPLLTAETMEQMLKEHTQREAKATILTAVAEDPTGYGRIIRSENGAVQKIVEHKDAS
                     EEERLVTEINTGTYCFDNEALFRAIDQVSNDNAQGEYYLPDVIEILKNEGETVAAYQT
                     GNFQETLGVNDRVALSQAEQFMKERINKRHMQNGVTLIDPMNTYISPDAVIGSDTVIY
                     PGTVIKGEVQIGEDTIIGPHTEIMNSAIGSRTVIKQSVVNHSKVGNDVNIGPFAHIRP
                     DSVIGNEVKIGNFVEIKKTQFGDRSKASHLSYVGDAEVGTDVNLGCGSITVNYDGKNK
                     YLTKIEDGAFIGCNSNLVAPVTVGEGAYVAAGSTVTEDVPGKALAIARARQVNKDDYV
                     KNIHKK"
     misc_feature    56355..57719
                     /gene="glmU"
                     /locus_tag="BSU00500"
                     /note="bifunctional N-acetylglucosamine-1-phosphate
                     uridyltransferase/glucosamine-1-phosphate
                     acetyltransferase; Provisional; Region: glmU; PRK14354"
                     /db_xref="CDD:184643"
     misc_feature    56367..57050
                     /gene="glmU"
                     /locus_tag="BSU00500"
                     /note="N-terminal domain of bacterial GlmU; Region:
                     GT2_GlmU_N_bac; cd02540"
                     /db_xref="CDD:133020"
     misc_feature    order(56376..56384,56505..56507,56586..56588,56595..56597,
                     56652..56654,56658..56660)
                     /gene="glmU"
                     /locus_tag="BSU00500"
                     /note="Substrate binding site; other site"
                     /db_xref="CDD:133020"
     misc_feature    order(56658..56660,57033..57035)
                     /gene="glmU"
                     /locus_tag="BSU00500"
                     /note="Mg++ binding site; other site"
                     /db_xref="CDD:133020"
     misc_feature    57105..57680
                     /gene="glmU"
                     /locus_tag="BSU00500"
                     /note="N-acetyl-glucosamine-1-phosphate uridyltransferase
                     (GlmU), C-terminal left-handed beta-helix (LbH)
                     acetyltransferase domain: GlmU is also known as
                     UDP-N-acetylglucosamine pyrophosphorylase. It is a
                     bifunctional bacterial enzyme that catalyzes two...;
                     Region: LbH_GlmU_C; cd03353"
                     /db_xref="CDD:100044"
     misc_feature    order(57348..57350,57396..57398,57402..57404,57438..57440,
                     57447..57449,57480..57491,57504..57512,57525..57527,
                     57555..57557,57561..57566,57615..57620,57669..57671)
                     /gene="glmU"
                     /locus_tag="BSU00500"
                     /note="active site"
                     /db_xref="CDD:100044"
     misc_feature    order(57348..57350,57396..57398,57402..57404,57438..57440,
                     57447..57449,57480..57488,57507..57509,57525..57527)
                     /gene="glmU"
                     /locus_tag="BSU00500"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:100044"
     misc_feature    order(57489..57491,57504..57506,57510..57512,57561..57566,
                     57615..57620,57669..57671)
                     /gene="glmU"
                     /locus_tag="BSU00500"
                     /note="CoA binding site [chemical binding]; other site"
                     /db_xref="CDD:100044"
     gene            57745..58698
                     /gene="prs"
                     /locus_tag="BSU00510"
                     /db_xref="GeneID:936985"
     CDS             57745..58698
                     /gene="prs"
                     /locus_tag="BSU00510"
                     /EC_number="2.7.6.1"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the formation of 5-phospho-alpha-D-ribose
                     1-phosphate from D-ribose 5-phosphate and ATP"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="NP_387932.1"
                     /db_xref="GI:16077119"
                     /db_xref="GeneID:936985"
                     /translation="MSNQYGDKNLKIFSLNSNPELAKEIADIVGVQLGKCSVTRFSDG
                     EVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPYYGYAR
                     QDRKARSREPITAKLFANLLETAGATRVIALDLHAPQIQGFFDIPIDHLMGVPILGEY
                     FEGKNLEDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNVAEVMNIVGNIEGK
                     TAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKELVVT
                     NSIKLPEEKKIERFKQLSVGPLLAEAIIRVHEQQSVSYLFS"
     misc_feature    57772..58692
                     /gene="prs"
                     /locus_tag="BSU00510"
                     /note="ribose-phosphate pyrophosphokinase; Provisional;
                     Region: PRK01259"
                     /db_xref="CDD:234929"
     misc_feature    57772..58122
                     /gene="prs"
                     /locus_tag="BSU00510"
                     /note="N-terminal domain of ribose phosphate
                     pyrophosphokinase; Region: Pribosyltran_N; pfam13793"
                     /db_xref="CDD:258077"
     misc_feature    58204..58578
                     /gene="prs"
                     /locus_tag="BSU00510"
                     /note="Phosphoribosyl transferase (PRT)-type I domain;
                     Region: PRTases_typeI; cd06223"
                     /db_xref="CDD:206754"
     misc_feature    order(58267..58269,58273..58275,58414..58422,58426..58440,
                     58510..58512)
                     /gene="prs"
                     /locus_tag="BSU00510"
                     /note="active site"
                     /db_xref="CDD:206754"
     gene            58783..59397
                     /gene="ctc"
                     /locus_tag="BSU00520"
                     /db_xref="GeneID:936984"
     CDS             58783..59397
                     /gene="ctc"
                     /locus_tag="BSU00520"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.6: Maintain"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="the Ctc family of proteins consists of two types,
                     one that contains the N-terminal ribosomal protein L25
                     domain only which in Escherichia coli binds the 5S rRNA
                     while a subset of proteins contain a C-terminal extension
                     that is involved in the stress response"
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein CTC"
                     /protein_id="NP_387933.1"
                     /db_xref="GI:16077120"
                     /db_xref="GeneID:936984"
                     /translation="MATLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDS
                     VELIKTLRDEGKNAVITLEVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVE
                     VPIHLTGEAIGVKNGGVLQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIADLPA
                     GGDYSFNHESDEVVASILPPQQQEAAEVDEEESADAQPEGENEQ"
     misc_feature    58789..59055
                     /gene="ctc"
                     /locus_tag="BSU00520"
                     /note="Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding
                     domain; Region: Ribosomal_L25_TL5_CTC; cd00495"
                     /db_xref="CDD:198379"
     misc_feature    58792..59319
                     /gene="ctc"
                     /locus_tag="BSU00520"
                     /note="ribosomal protein L25, Ctc-form; Region: ctc_TL5;
                     TIGR00731"
                     /db_xref="CDD:233106"
     misc_feature    order(58807..58809,58831..58839,58843..58845,58873..58881,
                     58891..58893,59002..59007,59011..59013,59041..59043,
                     59047..59049,59053..59055)
                     /gene="ctc"
                     /locus_tag="BSU00520"
                     /note="5S rRNA interface [nucleotide binding]; other site"
                     /db_xref="CDD:198379"
     misc_feature    order(58879..58881,58954..58956,58990..58992,59002..59004,
                     59053..59055)
                     /gene="ctc"
                     /locus_tag="BSU00520"
                     /note="CTC domain interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:198379"
     misc_feature    order(58996..59001,59008..59010,59029..59031,59053..59055)
                     /gene="ctc"
                     /locus_tag="BSU00520"
                     /note="L16 interface [polypeptide binding]; other site"
                     /db_xref="CDD:198379"
     misc_feature    59071..59334
                     /gene="ctc"
                     /locus_tag="BSU00520"
                     /note="Ribosomal protein TL5, C-terminal domain; Region:
                     Ribosomal_TL5_C; pfam14693"
                     /db_xref="CDD:258831"
     gene            59504..60070
                     /gene="pth"
                     /locus_tag="BSU00530"
                     /db_xref="GeneID:936740"
     CDS             59504..60070
                     /gene="pth"
                     /locus_tag="BSU00530"
                     /EC_number="3.1.1.29"
                     /function="16.8: Protect"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Enables the recycling of peptidyl-tRNAs produced at
                     termination of translation"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-tRNA hydrolase"
                     /protein_id="NP_387934.1"
                     /db_xref="GI:16077121"
                     /db_xref="GeneID:936740"
                     /translation="MLVIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNG
                     LYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRL
                     RTKGSAGGHNGIKSLIQHLGTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEE
                     AVDKSVKACEASLSKPFLEVMNEFNAKV"
     misc_feature    59510..60022
                     /gene="pth"
                     /locus_tag="BSU00530"
                     /note="Peptidyl-tRNA hydrolase (PTH) is a monomeric
                     protein that cleaves the ester bond linking the nascent
                     peptide and tRNA when peptidyl-tRNA is released
                     prematurely from the ribosome. This ensures the recycling
                     of peptidyl-tRNAs into tRNAs produced through...; Region:
                     PTH; cd00462"
                     /db_xref="CDD:238259"
     misc_feature    order(59528..59530,59558..59560,59693..59698,59774..59776,
                     59834..59836)
                     /gene="pth"
                     /locus_tag="BSU00530"
                     /note="putative active site [active]"
                     /db_xref="CDD:238259"
     misc_feature    59558..59560
                     /gene="pth"
                     /locus_tag="BSU00530"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238259"
     gene            60130..60360
                     /gene="yabK"
                     /locus_tag="BSU00540"
                     /db_xref="GeneID:936978"
     CDS             60130..60360
                     /gene="yabK"
                     /locus_tag="BSU00540"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387935.1"
                     /db_xref="GI:16077122"
                     /db_xref="GeneID:936978"
                     /translation="MALHYYCRHCGVKVGSLESSMVSTDSLGFQHLTNEERNDMISYK
                     ENGDVHVLTICEDCQEALDRNPHYHEYHTFIQ"
     misc_feature    60130..60357
                     /gene="yabK"
                     /locus_tag="BSU00540"
                     /note="Protein of unknown function (DUF2757); Region:
                     DUF2757; pfam10955"
                     /db_xref="CDD:256212"
     gene            60430..63963
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /db_xref="GeneID:936653"
     CDS             60430..63963
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /function="16.6: Maintain"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11065368, 16950921,
                     8594198, 9535092; Product type f: factor"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair-coupling factor"
                     /protein_id="NP_387936.1"
                     /db_xref="GI:16077123"
                     /db_xref="GeneID:936653"
                     /translation="MDNIQTFIKESDDFKSIINGLHEGLKEQLLAGLSGSARSVFTSA
                     LANETNKPIFLITHNLYQAQKVTDDLTSLLEDRSVLLYPVNELISSEIAVASPELRAQ
                     RLDVINRLTNGEAPIVVAPVAAIRRMLPPVEVWKSSQMLIQVGHDIEPDQLASRLVEV
                     GYERSDMVSAPGEFSIRGGIIDIYPLTSENPVRIELFDTEVDSIRSFNSDDQRSIETL
                     TSINIGPAKELIIRPEEKARAMEKIDSGLAASLKKLKADKQKEILHANISHDKERLSE
                     GQTDQELVKYLSYFYEKPASLLDYTPDNTLLILDEVSRIHEMEEQLQKEEAEFITNLL
                     EEGKILHDIRLSFSFQKIVAEQKRPLLYYSLFLRHVHHTSPQNIVNVSGRQMQSFHGQ
                     MNVLAGEMERFKKSNFTVVFLGANKERTQKLSSVLADYDIEAAMTDSKKALVQGQVYI
                     MEGELQSGFELPLMKLAVITEEELFKNRVKKKPRKQKLTNAERIKSYSELQIGDYVVH
                     INHGIGKYLGIETLEINGIHKDYLNIHYQGSDKLYVPVEQIDQVQKYVGSEGKEPKLY
                     KLGGSEWKRVKKKVETSVQDIADDLIKLYAEREASKGYAFSPDHEMQREFESAFPYQE
                     TEDQLRSIHEIKKDMERERPMDRLLCGDVGYGKTEVAIRAAFKAIGDGKQVALLVPTT
                     ILAQQHYETIKERFQDYPINIGLLSRFRTRKEANETIKGLKNGTVDIVIGTHRLLSKD
                     VVYKDLGLLIIDEEQRFGVTHKEKIKQIKANVDVLTLTATPIPRTLHMSMLGVRDLSV
                     IETPPENRFPVQTYVVEYNGALVREAIERELARGGQVYFLYNRVEDIERKADEISMLV
                     PDAKVAYAHGKMTENELETVMLSFLEGESDVLVSTTIIETGVDIPNVNTLIVFDADKM
                     GLSQLYQLRGRVGRSNRVAYAYFTYRRDKVLTEVAEKRLQAIKEFTELGSGFKIAMRD
                     LTIRGAGNLLGAQQHGFIDSVGFDLYSQMLKEAIEERKGDTAKTEQFETEIDVELDAY
                     IPETYIQDGKQKIDMYKRFRSVATIEEKNELQDEMIDRFGNYPKEVEYLFTVAEMKVY
                     ARQERVELIKQDKDAVRLTISEEASAEIDGQKLFELGNQYGRQIGLGMEGKKLKISIQ
                     TKGRSADEWLDTVLGMLKGLKDVKKQTISST"
     misc_feature    60472..63945
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /note="Transcription-repair coupling factor (superfamily
                     II helicase) [DNA replication, recombination, and repair /
                     Transcription]; Region: Mfd; COG1197"
                     /db_xref="CDD:224118"
     misc_feature    60853..61083
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /note="Bifunctional transglycosylase second domain;
                     Region: UB2H; pfam14814"
                     /db_xref="CDD:258951"
     misc_feature    61924..62217
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /note="CarD-like/TRCF domain; Region: CarD_TRCF;
                     smart01058"
                     /db_xref="CDD:215001"
     misc_feature    62362..62772
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /note="DEAD-like helicases superfamily. A diverse family
                     of proteins involved in ATP-dependent RNA or DNA
                     unwinding. This domain contains the ATP-binding region;
                     Region: DEXDc; cd00046"
                     /db_xref="CDD:238005"
     misc_feature    62389..62403
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:238005"
     misc_feature    62683..62694
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /note="putative Mg++ binding site [ion binding]; other
                     site"
                     /db_xref="CDD:238005"
     misc_feature    62851..63240
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /note="Helicase superfamily c-terminal domain; associated
                     with DEXDc-, DEAD-, and DEAH-box proteins, yeast
                     initiation factor 4A, Ski2p, and Hepatitis C virus NS3
                     helicases; this domain is found in a wide variety of
                     helicases and helicase related proteins; may...; Region:
                     HELICc; cd00079"
                     /db_xref="CDD:238034"
     misc_feature    order(62947..62958,63022..63027,63100..63108)
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /note="nucleotide binding region [chemical binding]; other
                     site"
                     /db_xref="CDD:238034"
     misc_feature    order(63124..63126,63190..63192,63202..63204,63211..63213)
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /note="ATP-binding site [chemical binding]; other site"
                     /db_xref="CDD:238034"
     misc_feature    63499..63795
                     /gene="mfd"
                     /locus_tag="BSU00550"
                     /note="This domain is found in proteins necessary for
                     strand-specific repair in DNA such as TRCF in Escherichia
                     coli; Region: TRCF; smart00982"
                     /db_xref="CDD:198050"
     gene            64099..64635
                     /gene="spoVT"
                     /locus_tag="BSU00560"
                     /db_xref="GeneID:936975"
     CDS             64099..64635
                     /gene="spoVT"
                     /locus_tag="BSU00560"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15063493, 15939023,
                     16159768, 18996130, 8755877; Product type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="stage V sporulation protein T"
                     /protein_id="NP_387937.1"
                     /db_xref="GI:16077124"
                     /db_xref="GeneID:936975"
                     /translation="MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEV
                     ILKKYSPISELGDFAKEYADALYDSLGHSVLICDRDVYIAVSGSSKKDYLNKSISEML
                     ERTMDQRSSVLESDAKSVQLVNGIDEDMNSYTVGPIVANGDPIGAVVIFSKDQTMGEV
                     EHKAVETAAGFLARQMEQ"
     misc_feature    64099..64377
                     /gene="spoVT"
                     /locus_tag="BSU00560"
                     /note="Regulators of stationary/sporulation gene
                     expression [Transcription]; Region: AbrB; COG2002"
                     /db_xref="CDD:224913"
     misc_feature    64102..64629
                     /gene="spoVT"
                     /locus_tag="BSU00560"
                     /note="stage V sporulation protein T; Region: spore_V_T;
                     TIGR02851"
                     /db_xref="CDD:131898"
     gene            64817..66415
                     /gene="yabM"
                     /locus_tag="BSU00570"
                     /db_xref="GeneID:936539"
     CDS             64817..66415
                     /gene="yabM"
                     /locus_tag="BSU00570"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein"
                     /protein_id="NP_387938.1"
                     /db_xref="GI:16077125"
                     /db_xref="GeneID:936539"
                     /translation="MDDSIGVKRHWIWQGAFVLILAGVITKILSAVYRVPFQNIVGDV
                     GFYIYQQVYPFLGIAVMLSTSGFPVIISKLMNDYSEKNHHTILKISALFLSLIGILLF
                     LCLYLGAVPIALFMGDSHLAVLIQVAAYAFLLFPFVALLRGGFQGRHEMLPSALSQMT
                     EQFLRVAVLLGLSFWLVKKGASLYTAGAAAASGSLAGSLVALIILGFFWFKTKRDNQT
                     DRQNENVITTKELTKKLLLYSVTICVSSLLLLFIQLVDALNLYALLSGGEASEEAKCL
                     KGIYDRGQPLLQLGSVFAVSIATSLVPYISMAVKNKELKIMKEKITSSLKLCLVLGTG
                     ASAGLICILKPVNIMLFQNGEGTGALQVFSCSILFASLAVTAAAVLQGAGYTVFPAIA
                     VGAGVAVKWVLNTLLVPRYGIEGASLATAASFAAVAGLNLYQLRQKEWLDKLRGVLIP
                     IIGSALLMSAVLLAYTRLWTFLFPATGRGAAVIESLSAVAIGGAVFIYCMMRLGIFTD
                     EELNSVPFGSKLSKFMRRREQNGG"
     misc_feature    64838..66331
                     /gene="yabM"
                     /locus_tag="BSU00570"
                     /note="Membrane protein involved in the export of
                     O-antigen and teichoic acid [General function prediction
                     only]; Region: RfbX; COG2244"
                     /db_xref="CDD:225153"
     misc_feature    64865..66130
                     /gene="yabM"
                     /locus_tag="BSU00570"
                     /note="Stage V sporulation protein B, also known as Stage
                     III sporulation protein F, and related proteins; Region:
                     MATE_SpoVB_like; cd13124"
                     /db_xref="CDD:240529"
     gene            66405..67874
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /db_xref="GeneID:936973"
     CDS             66405..67874
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /function="16.6: Maintain"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 11178267; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387939.1"
                     /db_xref="GI:16077126"
                     /db_xref="GeneID:936973"
                     /translation="MAGKITVVGLGAGDMDQLTIGIHKLLTKADTLYVRTKDHPLIEE
                     LEKETKNIRFFDDIYEKHDQFEAVYEEIADILFEAARREDVVYAVPGHPFVAEKTVQL
                     LTERQEKENVQVKVAGGQSFLDATFNVLQIDPIEGFQFVDAGTLSADELELRHHLIIC
                     QVYDQMTASEVKLTLMEKLPDDYEVVIVTAAGSRGEEIRTVPLFELDRNVALNNLTSV
                     YIPPIKEEKLLYHEFSTFRSIIRELRGPNGCPWDKKQTHQSLKQYMIEECYELLEAID
                     EEDTDHMIEELGDVLLQVLLHAQIGEDEGYFTIDDVIKGISEKMVRRHPHVFKDVKVQ
                     DENDVLANWEDIKKAEKNTSESSLLDSVPKTLPALSKAAKLQKKAAKVGFDWEDVSDI
                     WEKVSEEMKEFSSEVSEAPHEHNLKAEFGDILFALVNVARFYKIEPEEALTMTNDKFR
                     RRFSYIEETAKEEGVELADMSLEDMDKLWNEAKETERRS"
     misc_feature    66405..67865
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="Protein containing tetrapyrrole methyltransferase
                     domain and MazG-like (predicted pyrophosphatase) domain
                     [General function prediction only]; Region: COG3956"
                     /db_xref="CDD:226465"
     misc_feature    66414..67073
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="N-terminal S-AdoMet dependent methylase domain of
                     Bacillus subtilis YabN and related proteins; Region:
                     YabN_N; cd11723"
                     /db_xref="CDD:212509"
     misc_feature    order(66438..66440,66672..66680,66687..66692,66765..66770,
                     66882..66884,66966..66968,66972..66977,67047..67055)
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="putative SAM binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:212509"
     misc_feature    order(66456..66467,66471..66473,66678..66695,66705..66710,
                     66714..66719,66750..66752,66756..66767,66771..66776,
                     66783..66788,66822..66836)
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="putative homodimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:212509"
     misc_feature    67104..67445
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
                     3.6.1.8) N-terminal tandem-domain of MazG proteins from
                     Escherichia coli and bacterial homologs; Region:
                     NTP-PPase_MazG_Nterm; cd11528"
                     /db_xref="CDD:212135"
     misc_feature    order(67107..67112,67119..67121,67173..67178,67185..67187,
                     67194..67199,67206..67211,67218..67220,67227..67229,
                     67242..67244,67251..67256,67263..67280,67284..67286,
                     67293..67295,67320..67322,67329..67343,67347..67355,
                     67359..67364)
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:212135"
     misc_feature    order(67203..67205,67212..67214,67260..67262,67269..67271)
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:212135"
     misc_feature    67548..67853
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
                     3.6.1.8) C-terminal tandem-domain of MazG proteins from
                     Escherichia coli and bacterial homologs'; Region:
                     NTP-PPase_MazG_Cterm; cd11529"
                     /db_xref="CDD:212136"
     misc_feature    order(67548..67556,67590..67595,67611..67616,67650..67658,
                     67662..67670,67674..67679,67683..67685,67704..67712,
                     67719..67721,67725..67754,67761..67766,67773..67775,
                     67818..67820,67827..67829,67839..67841)
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:212136"
     misc_feature    order(67554..67562,67587..67589,67599..67601,67608..67610,
                     67644..67646,67656..67661,67668..67670)
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="active site"
                     /db_xref="CDD:212136"
     misc_feature    order(67596..67601,67608..67610,67656..67661,67668..67670)
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="putative chemical substrate binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:212136"
     misc_feature    order(67599..67601,67608..67610,67659..67661,67668..67670)
                     /gene="yabN"
                     /locus_tag="BSU00580"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:212136"
     gene            67877..68137
                     /gene="yabO"
                     /locus_tag="BSU00590"
                     /db_xref="GeneID:936800"
     CDS             67877..68137
                     /gene="yabO"
                     /locus_tag="BSU00590"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 10675343, 10675344; Product type pf:
                     factor"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387940.1"
                     /db_xref="GI:16077127"
                     /db_xref="GeneID:936800"
                     /translation="MRLDKFLKVSRLIKRRTLAKEVADQGRISINGNQAKASSDVKPG
                     DELTVRFGQKLVTVQVNELKDTTKKEEAANMYTILKEEKLGE"
     misc_feature    67877..68050
                     /gene="yabO"
                     /locus_tag="BSU00590"
                     /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
                     domain surface is populated by conserved, charged residues
                     that define a likely RNA-binding site;  Found in stress
                     proteins, ribosomal proteins and tRNA synthetases; This
                     may imply a hitherto unrecognized...; Region: S4; cd00165"
                     /db_xref="CDD:238095"
     misc_feature    order(67880..67882,67916..67921,67925..67930,67934..67939,
                     67946..67951,67955..67957,67976..67981,67982..67996,
                     68000..68002)
                     /gene="yabO"
                     /locus_tag="BSU00590"
                     /note="RNA binding surface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:238095"
     gene            68216..68518
                     /gene="yabP"
                     /locus_tag="BSU00600"
                     /db_xref="GeneID:936966"
     CDS             68216..68518
                     /gene="yabP"
                     /locus_tag="BSU00600"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11283287, 15231775,
                     10869437; Product type f: factor"
                     /codon_start=1
                     /transl_table=11
                     /product="spore protein YabP"
                     /protein_id="NP_387941.1"
                     /db_xref="GI:16077128"
                     /db_xref="GeneID:936966"
                     /translation="MNSYYDQKGSSSVPEQHDVTMKGRKHLDISGVKHVESFDNEEFL
                     LETVMGMLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYLDEQQGDKAKGFFSKLFK"
     misc_feature    68264..68515
                     /gene="yabP"
                     /locus_tag="BSU00600"
                     /note="sporulation protein YabP; Region: spore_yabP;
                     TIGR02892"
                     /db_xref="CDD:234051"
     gene            68515..69150
                     /gene="yabQ"
                     /locus_tag="BSU00610"
                     /db_xref="GeneID:936971"
     CDS             68515..69150
                     /gene="yabQ"
                     /locus_tag="BSU00610"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11283287, 15849754,
                     16850406, 10869437; Product type f: factor"
                     /codon_start=1
                     /transl_table=11
                     /product="spore protein YabQ"
                     /protein_id="NP_387942.1"
                     /db_xref="GI:16077129"
                     /db_xref="GeneID:936971"
                     /translation="MTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIH
                     DILFWIMQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSLCKRIYIKILKFVIYLV
                     VSVYQFFKKLIQHVLFRPIVWTCGAIIWLAAFLFKKTYSLIGFLLLCLYKIVMVLCFP
                     IRFIAKQCLKLLPVKMRLTFRRYFEKGAGFLKKKKKLLITIRTTITRFLKR"
     misc_feature    68518..68907
                     /gene="yabQ"
                     /locus_tag="BSU00610"
                     /note="spore cortex biosynthesis protein YabQ; Region:
                     spore_yabQ; TIGR02893"
                     /db_xref="CDD:131939"
     gene            69168..69545
                     /gene="divIC"
                     /locus_tag="BSU00620"
                     /db_xref="GeneID:936786"
     CDS             69168..69545
                     /gene="divIC"
                     /locus_tag="BSU00620"
                     /function="16.9: Replicate"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11283287, 11994149,
                     12682299, 16936019; Product type f: factor"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DivIC"
                     /protein_id="NP_387943.1"
                     /db_xref="GI:16077130"
                     /db_xref="GeneID:936786"
                     /translation="MNFSRERTITEIQNDYKEQVERQNQLKKRRRKGLYRRLTVFGAL
                     VFLTAIVLASSVWSQTSSLSAKEEKKEQLEKELKSLKTKQTDLKEEISKLKDEDYVTE
                     LARRDLFMSGDGEIIFNVEKKSK"
     misc_feature    69198..69542
                     /gene="divIC"
                     /locus_tag="BSU00620"
                     /note="Septum formation initiator [Cell division and
                     chromosome partitioning]; Region: COG2919"
                     /db_xref="CDD:225471"
     gene            69626..70012
                     /gene="yabR"
                     /locus_tag="BSU00630"
                     /db_xref="GeneID:936574"
     CDS             69626..70012
                     /gene="yabR"
                     /locus_tag="BSU00630"
                     /function="16.6: Maintain"
                     /function="16.3: Control"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15066026, 16014871, 9862121; Product
                     type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387944.1"
                     /db_xref="GI:16077131"
                     /db_xref="GeneID:936574"
                     /translation="MSIEVGSKLQGKITGITNFGAFVELPGGSTGLVHISEVADNYVK
                     DINDHLKVGDQVEVKVINVEKDGKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNKFL
                     KDSEDRLSSLKRNTESKRGGRGARRG"
     misc_feature    69626..69982
                     /gene="yabR"
                     /locus_tag="BSU00630"
                     /note="hypothetical protein; Provisional; Region:
                     PRK08582"
                     /db_xref="CDD:236305"
     misc_feature    69641..69847
                     /gene="yabR"
                     /locus_tag="BSU00630"
                     /note="S1_RPS1_repeat_hs4: Ribosomal protein S1 (RPS1)
                     domain. RPS1 is a component of the small ribosomal subunit
                     thought to be involved in the recognition and binding of
                     mRNA's during translation initiation. The bacterial RPS1
                     domain architecture consists...; Region:
                     S1_RPS1_repeat_hs4; cd05692"
                     /db_xref="CDD:240197"
     misc_feature    order(69665..69667,69689..69691,69719..69721,69725..69727)
                     /gene="yabR"
                     /locus_tag="BSU00630"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:240197"
     gene            70181..70257
                     /gene="trnSL-Met1"
                     /locus_tag="BSU_tRNA_10"
                     /db_xref="GeneID:936631"
     tRNA            70181..70257
                     /gene="trnSL-Met1"
                     /locus_tag="BSU_tRNA_10"
                     /product="tRNA-Met"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936631"
     gene            70267..70338
                     /gene="trnSL-Glu1"
                     /locus_tag="BSU_tRNA_11"
                     /db_xref="GeneID:2914278"
     tRNA            70267..70338
                     /gene="trnSL-Glu1"
                     /locus_tag="BSU_tRNA_11"
                     /product="tRNA-Glu"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914278"
     gene            70538..73021
                     /gene="spoIIE"
                     /locus_tag="BSU00640"
                     /db_xref="GeneID:938480"
     CDS             70538..73021
                     /gene="spoIIE"
                     /locus_tag="BSU00640"
                     /EC_number="3.1.3.16"
                     /function="16.3: Control"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10747015, 12180929,
                     15126482, 15866939, 15978076; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein E"
                     /protein_id="NP_387945.1"
                     /db_xref="GI:16077132"
                     /db_xref="GeneID:938480"
                     /translation="MEKAERRVNGPMAGQALEKLQSFFNRGTKLVTHHLHSLFFYKGF
                     IYVVIGFLLGRAFILSEVLPFALPFFGAMLLIRRDKAFYAVLAVLAGALTISPKHSLL
                     ILAALLAFFVFSKVAAFITDDRVKALPIVVFFSMAAARAGFVYAQNGVFTTYDYVMAI
                     VEAGLSFILTLIFLQSLPIFTVKKVKQSLKIEEIICFMILIASVLTGLAGLSYQGMQA
                     EHILARYVVLSFSFIGGASIGCTVGVVTGLILGLANIGNLYQMSLLAFSGLLGGLLKE
                     GKKAGAAIGLIVGSLLISLYGEGSAGLMTTLYESLIAVCLFLLTPQSITRKVARYIPG
                     TVEHLQEQQQYARKIRDVTAQKVDQFSNVFHALSESFATFYQASDEQTDDSEVDLFLS
                     KITEHSCQTCYKKNRCWVQNFDKTYDLMKQVMLETEEKEYASNRRLKKEFQQYCSKSK
                     QVEELIEDELAHHHAHLTLKKKVQDSRRLVAEQLLGVSEVMADFSREIKREREQHFLQ
                     EEQIIEALQHFGIEIQHVEIYSLEQGNIDIEMTIPFSGHGESEKIIAPMLSDILEEQI
                     LVKAEQHSPHPNGYSHVAFGSTKSYRVSTGAAHAAKGGGLVSGDSYSMMELGARKYAA
                     AISDGMGNGARAHFESNETIKLLEKILESGIDEKIAIKTINSILSLRTTDEIYSTLDL
                     SIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNLPIGIINEFDVEVVSEQLKAGDL
                     LIMMSDGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADLLMEEVIRTRSGQIEDDMT
                     VVVVRIDHNTPKWASIPVPAIFQNKQEIS"
     misc_feature    70667..72952
                     /gene="spoIIE"
                     /locus_tag="BSU00640"
                     /note="stage II sporulation protein E; Region: spore_II_E;
                     TIGR02865"
                     /db_xref="CDD:234038"
     misc_feature    71504..>71827
                     /gene="spoIIE"
                     /locus_tag="BSU00640"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; Region: PP2Cc; smart00332"
                     /db_xref="CDD:214625"
     misc_feature    71822..>72091
                     /gene="spoIIE"
                     /locus_tag="BSU00640"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; Region: BAR; cl12013"
                     /db_xref="CDD:264507"
     misc_feature    72389..72952
                     /gene="spoIIE"
                     /locus_tag="BSU00640"
                     /note="Stage II sporulation protein E (SpoIIE); Region:
                     SpoIIE; pfam07228"
                     /db_xref="CDD:254114"
     gene            73106..73843
                     /gene="yabS"
                     /locus_tag="BSU00650"
                     /db_xref="GeneID:936965"
     CDS             73106..73843
                     /gene="yabS"
                     /locus_tag="BSU00650"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387946.1"
                     /db_xref="GI:16077133"
                     /db_xref="GeneID:936965"
                     /translation="MNNGHLNQILLITDGCSNHGEDPLAMAAFAKEQGITVNVIGIME
                     ENQIDPEAMKEVEGIALAGGGVHQVVYASQLSQTVQMVTKKAMTQTLQGVVNQELKQI
                     LGKNVEMEELSPEKRGEVMEVVDELGETVHLQVLVLVDTSASMAPKLPTVKEALIDLS
                     VSLNSRIGNNEFAMCIFPGKKQEVELVLNWTPKLQSLSTLFAKLSTGGITPTGPAIRE
                     ATLQFEKIRSRRGMLADDERRFDEFGM"
     misc_feature    <73106..73840
                     /gene="yabS"
                     /locus_tag="BSU00650"
                     /note="Uncharacterized protein containing a von Willebrand
                     factor type A (vWA) domain [General function prediction
                     only]; Region: COG2304"
                     /db_xref="CDD:225187"
     misc_feature    <73130..73312
                     /gene="yabS"
                     /locus_tag="BSU00650"
                     /note="von Willebrand factor (vWF) type A domain; Region:
                     VWA; smart00327"
                     /db_xref="CDD:214621"
     misc_feature    73508..>73798
                     /gene="yabS"
                     /locus_tag="BSU00650"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; Region: vWFA;
                     cd00198"
                     /db_xref="CDD:238119"
     misc_feature    order(73523..73525,73733..73735)
                     /gene="yabS"
                     /locus_tag="BSU00650"
                     /note="metal ion-dependent adhesion site (MIDAS); other
                     site"
                     /db_xref="CDD:238119"
     gene            73809..74825
                     /gene="yabT"
                     /locus_tag="BSU00660"
                     /db_xref="GeneID:936964"
     CDS             73809..74825
                     /gene="yabT"
                     /locus_tag="BSU00660"
                     /EC_number="2.7.11.1"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="NP_387947.2"
                     /db_xref="GI:50812174"
                     /db_xref="GeneID:936964"
                     /translation="MMNDALTSLACSLKPGTTIKGKWNGNTYTLRKQLGKGANGIVYL
                     AETSDGHVALKVSDDSLSITSEVNVLKSFSKAQSVTMGPSFFDTDDAYIPSANTKVSF
                     YAMEYIKGPLLLKYVSDKGAEWIPVLMIQLLSSLSVLHQQGWIFGDLKPDNLIVTGPP
                     ARIRCIDVGGTTKEGRAIKEYTEFYDRGYWGYGTRKAEPSYDLFAVAMIMINSVHKKE
                     FKKTNQPKEQLRSLIEGNPLLQKYKKALFSALNGDYQSADEMKKDMLDAGQKAAQRKQ
                     PIKASPQPATRQRQQKPRQGKITKTRYTPKQKPAKSGGLFETTLIVISVLALYFAYII
                     FFLI"
     misc_feature    73890..>74693
                     /gene="yabT"
                     /locus_tag="BSU00660"
                     /note="Serine/threonine protein kinase [General function
                     prediction only / Signal transduction mechanisms /
                     Transcription / DNA replication, recombination, and
                     repair]; Region: SPS1; COG0515"
                     /db_xref="CDD:223589"
     misc_feature    73908..74438
                     /gene="yabT"
                     /locus_tag="BSU00660"
                     /note="Protein Kinases, catalytic domain; Region:
                     PKc_like; cl09925"
                     /db_xref="CDD:263920"
     misc_feature    order(73908..73922,73932..73934,73965..73967,73971..73973,
                     74043..74045,74121..74132,74142..74144,74148..74150,
                     74250..74252,74256..74258,74262..74267,74271..74273,
                     74307..74309,74316..74318,74370..74381)
                     /gene="yabT"
                     /locus_tag="BSU00660"
                     /note="active site"
                     /db_xref="CDD:173623"
     misc_feature    order(73908..73922,73932..73934,73965..73967,73971..73973,
                     74043..74045,74121..74132,74142..74144,74250..74252,
                     74256..74258,74262..74267,74271..74273,74307..74309)
                     /gene="yabT"
                     /locus_tag="BSU00660"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:173623"
     misc_feature    order(73920..73922,74142..74144,74148..74150,74250..74252,
                     74256..74258,74262..74264,74316..74318,74370..74381)
                     /gene="yabT"
                     /locus_tag="BSU00660"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:173623"
     misc_feature    order(74304..74324,74370..74381)
                     /gene="yabT"
                     /locus_tag="BSU00660"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:173623"
     gene            74929..76347
                     /gene="tilS"
                     /locus_tag="BSU00670"
                     /db_xref="GeneID:936922"
     CDS             74929..76347
                     /gene="tilS"
                     /locus_tag="BSU00670"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 12682299, 14527414, 16039592, 17005971; Product
                     type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(ile)-lysidine synthase"
                     /protein_id="NP_387948.1"
                     /db_xref="GI:16077135"
                     /db_xref="GeneID:936922"
                     /translation="MKSVKDFLNKHNLTLKGATIIVGVSGGPDSMALLHALHTLCGRS
                     ANVIAAHVDHRFRGAESEEDMRFVQAYCKAEQLVCETAQINVTAYAQEKGLNKQAAAR
                     DCRYQFFEEIMSKHQADYLALAHHGDDQVETMLMKLAKGTLGTGLAGMQPVRRFGTGR
                     IIRPFLTITKEEILHYCHENGLSYRTDESNAKDDYTRNRFRKTVLPFLKQESPDVHKR
                     FQKVSEALTEDEQFLQSLTKDEMNKVITSQSNTSVEINSSQLLALPMPLQRRGVQLIL
                     NYLYENVPSSFSAHHIQQFLDWAENGGPSGVLDFPKGLKVVKSYQTCLFTFEQWQCKN
                     VPFEYQISGAADETAVLPNGYLIEARHYADSPEEHGNAVFITSEKKVRFPLTIRTRKA
                     GDRIKLKGMNGSKKVKDIFIDKKLPLQERDNWPIVTDASGEIIWIPGLKKSIFEDLVI
                     PNSDRIVLQYRQHEKCRGQAKS"
     misc_feature    74929..75663
                     /gene="tilS"
                     /locus_tag="BSU00670"
                     /note="tRNA(Ile)-lysidine synthase MesJ [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     MesJ; COG0037"
                     /db_xref="CDD:223115"
     misc_feature    74983..75546
                     /gene="tilS"
                     /locus_tag="BSU00670"
                     /note="N-terminal domain of predicted ATPase of the
                     PP-loop faimly implicated in cell cycle control [Cell
                     division and chromosome partitioning]. This is a subfamily
                     of Adenine nucleotide alpha hydrolases
                     superfamily.Adeninosine nucleotide alpha hydrolases...;
                     Region: PP-ATPase; cd01992"
                     /db_xref="CDD:238950"
     misc_feature    order(74995..75003,75007..75018,75079..75081,75085..75087)
                     /gene="tilS"
                     /locus_tag="BSU00670"
                     /note="Ligand Binding Site [chemical binding]; other site"
                     /db_xref="CDD:238950"
     misc_feature    75700..75903
                     /gene="tilS"
                     /locus_tag="BSU00670"
                     /note="TilS substrate binding domain; Region: TilS;
                     pfam09179"
                     /db_xref="CDD:255218"
     misc_feature    76081..76296
                     /gene="tilS"
                     /locus_tag="BSU00670"
                     /note="TilS substrate C-terminal domain; Region: TilS_C;
                     smart00977"
                     /db_xref="CDD:198045"
     gene            76344..76886
                     /gene="hprT"
                     /locus_tag="BSU00680"
                     /db_xref="GeneID:936945"
     CDS             76344..76886
                     /gene="hprT"
                     /locus_tag="BSU00680"
                     /EC_number="2.4.2.8"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 3110131, 6408059; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="NP_387949.1"
                     /db_xref="GI:16077136"
                     /db_xref="GeneID:936945"
                     /translation="MMKHDIEKVLISEEEIQKKVKELGAELTSEYQDTFPLAIGVLKG
                     ALPFMADLIKHIDTYLEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDII
                     DSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDY
                     AERYRNLPYIGVLKPAVYES"
     misc_feature    76401..76775
                     /gene="hprT"
                     /locus_tag="BSU00680"
                     /note="Phosphoribosyl transferase (PRT)-type I domain;
                     Region: PRTases_typeI; cd06223"
                     /db_xref="CDD:206754"
     misc_feature    order(76467..76469,76473..76475,76644..76646,76650..76664,
                     76734..76736)
                     /gene="hprT"
                     /locus_tag="BSU00680"
                     /note="active site"
                     /db_xref="CDD:206754"
     gene            76984..78897
                     /gene="ftsH"
                     /locus_tag="BSU00690"
                     /db_xref="GeneID:938094"
     CDS             76984..78897
                     /gene="ftsH"
                     /locus_tag="BSU00690"
                     /EC_number="3.4.24.-"
                     /function="16.9: Replicate"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10851010, 10913836,
                     12533473, 9076729, 9084181, 9287010, 9352926; Product type
                     e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="NP_387950.1"
                     /db_xref="GI:16077137"
                     /db_xref="GeneID:938094"
                     /translation="MNRVFRNTIFYLLILLVVIGVVSYFQTSNPKTENMSYSTFIKNL
                     DDGKVDSVSVQPVRGVYEVKGQLKNYDKDQYFLTHVPEGKGADQIFNALKKTDVKVEP
                     AQETSGWVTFLTTIIPFVIIFILFFFLLNQAQGGGSRVMNFGKSKAKLYTEEKKRVKF
                     KDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEA
                     GVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGG
                     HDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVI
                     GREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDAR
                     DIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQ
                     AGGYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGEVSTGAHNDFQRATNIAR
                     RMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRIIKECYE
                     RAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHGTLPERNFSDDEKNDDVKVNI
                     LTKTEEKKDDTKE"
     misc_feature    77008..77298
                     /gene="ftsH"
                     /locus_tag="BSU00690"
                     /note="FtsH Extracellular; Region: FtsH_ext; pfam06480"
                     /db_xref="CDD:253758"
     misc_feature    77374..78789
                     /gene="ftsH"
                     /locus_tag="BSU00690"
                     /note="ATP-dependent metalloprotease FtsH; Region:
                     FtsH_fam; TIGR01241"
                     /db_xref="CDD:233327"
     misc_feature    77473..77970
                     /gene="ftsH"
                     /locus_tag="BSU00690"
                     /note="The AAA+ (ATPases Associated with a wide variety of
                     cellular Activities) superfamily represents an ancient
                     group of ATPases belonging to the ASCE (for additional
                     strand, catalytic E) division of the P-loop NTPase fold.
                     The ASCE division also includes ABC; Region: AAA; cd00009"
                     /db_xref="CDD:99707"
     misc_feature    77584..77607
                     /gene="ftsH"
                     /locus_tag="BSU00690"
                     /note="Walker A motif; other site"
                     /db_xref="CDD:99707"
     misc_feature    order(77587..77610,77761..77763,77902..77904)
                     /gene="ftsH"
                     /locus_tag="BSU00690"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:99707"
     misc_feature    77749..77766
                     /gene="ftsH"
                     /locus_tag="BSU00690"
                     /note="Walker B motif; other site"
                     /db_xref="CDD:99707"
     misc_feature    77944..77946
                     /gene="ftsH"
                     /locus_tag="BSU00690"
                     /note="arginine finger; other site"
                     /db_xref="CDD:99707"
     misc_feature    78211..78783
                     /gene="ftsH"
                     /locus_tag="BSU00690"
                     /note="Peptidase family M41; Region: Peptidase_M41;
                     pfam01434"
                     /db_xref="CDD:250619"
     gene            79092..79868
                     /gene="coaX"
                     /locus_tag="BSU00700"
                     /db_xref="GeneID:936960"
     CDS             79092..79868
                     /gene="coaX"
                     /locus_tag="BSU00700"
                     /EC_number="2.7.1.33"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="type III; catalyzes the formation of
                     (R)-4'-phosphopantothenate from (R)-pantothenate in
                     coenzyme A biosynthesis; type III pantothenate kinases are
                     not subject to feedback inhibition from coenzyme A and
                     have a high Km for ATP"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="NP_387951.2"
                     /db_xref="GI:255767018"
                     /db_xref="GeneID:936960"
                     /translation="MLLVIDVGNTNTVLGVYHDGKLEYHWRIETSRHKTEDEFGMILR
                     SLFDHSGLMFEQIDGIIISSVVPPIMFALERMCTKYFHIEPQIVGPGMKTGLNIKYDN
                     PKEVGADRIVNAVAAIHLYGNPLIVVDFGTATTYCYIDENKQYMGGAIAPGITISTEA
                     LYSRAAKLPRIEITRPDNIIGKNTVSAMQSGILFGYVGQVEGIVKRMKWQAKQEPKVI
                     ATGGLAPLIANESDCIDIVDPFLTLKGLELIYERNRVGSV"
     misc_feature    79098..79631
                     /gene="coaX"
                     /locus_tag="BSU00700"
                     /note="Nucleotide-Binding Domain of the sugar
                     kinase/HSP70/actin superfamily; Region:
                     NBD_sugar-kinase_HSP70_actin; cd00012"
                     /db_xref="CDD:212657"
     misc_feature    order(79107..79118,79122..79124,79128..79130,79416..79418,
                     79476..79487)
                     /gene="coaX"
                     /locus_tag="BSU00700"
                     /note="nucleotide binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:212657"
     gene            79880..80755
                     /gene="hslO"
                     /locus_tag="BSU00710"
                     /db_xref="GeneID:936762"
     CDS             79880..80755
                     /gene="hslO"
                     /locus_tag="BSU00710"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="becomes active under oxidative stress; four
                     conserved cysteines bind a zinc atom when they are in the
                     reduced state and the enzyme is inactive; oxidative stress
                     results in oxidized cysteines, release of zinc, and
                     binding of Hsp33 to aggregation-prone proteins; forms
                     dimers and higher order oligomers"
                     /codon_start=1
                     /transl_table=11
                     /product="33 kDa chaperonin"
                     /protein_id="NP_387952.1"
                     /db_xref="GI:16077139"
                     /db_xref="GeneID:936762"
                     /translation="MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGR
                     TMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQG
                     KLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVG
                     VLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISKLIQKGLTPEEILEEV
                     LGEKPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYL
                     FTKEELEGLRDQTTR"
     misc_feature    79880..80743
                     /gene="hslO"
                     /locus_tag="BSU00710"
                     /note="Hsp33-like chaperonin; Reviewed; Region: hslO;
                     PRK00114"
                     /db_xref="CDD:234643"
     misc_feature    79889..80713
                     /gene="hslO"
                     /locus_tag="BSU00710"
                     /note="Heat shock protein 33 (Hsp33):  Cytosolic protein
                     that acts as a molecular chaperone under oxidative
                     conditions.  In normal (reducing) cytosolic conditions,
                     four conserved Cys residues are coordinated by a Zn ion.
                     Under oxidative stress (such as heat...; Region: Hsp33;
                     cd00498"
                     /db_xref="CDD:238278"
     misc_feature    order(79922..79924,80315..80317,80327..80335,80411..80413,
                     80582..80584)
                     /gene="hslO"
                     /locus_tag="BSU00710"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238278"
     misc_feature    order(79922..79924,80393..80395,80399..80401,80411..80422)
                     /gene="hslO"
                     /locus_tag="BSU00710"
                     /note="domain crossover interface; other site"
                     /db_xref="CDD:238278"
     misc_feature    order(80582..80584,80588..80590,80681..80683,80690..80692)
                     /gene="hslO"
                     /locus_tag="BSU00710"
                     /note="redox-dependent activation switch; other site"
                     /db_xref="CDD:238278"
     gene            80802..81695
                     /gene="yacD"
                     /locus_tag="BSU00720"
                     /db_xref="GeneID:936955"
     CDS             80802..81695
                     /gene="yacD"
                     /locus_tag="BSU00720"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15187182, 15856219; Product type pf:
                     factor"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="NP_387953.1"
                     /db_xref="GI:16077140"
                     /db_xref="GeneID:936955"
                     /translation="MKSRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGG
                     KSVTREEWLKEMEDQYGKSTLEDMINVRVVEQLAKKNKLKISKSEVDREFLLIKAVNN
                     SFYEDEHTTEKEWKDQIRYNILLEDLLTRDIDISNKELESFYNKNKELYQFDDSYRIR
                     HIVVKDEEEAREVLKELKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEASDNIPSAYI
                     EEAKTLKEDEWSQEPIKVSNGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQLGDKA
                     TVKTLWKEADVSWFYGEKSTK"
     misc_feature    80829..81656
                     /gene="yacD"
                     /locus_tag="BSU00720"
                     /note="peptidylprolyl isomerase; Provisional; Region:
                     prsA; PRK00059"
                     /db_xref="CDD:234605"
     misc_feature    <80895..81188
                     /gene="yacD"
                     /locus_tag="BSU00720"
                     /note="SurA N-terminal domain; Region: SurA_N_3; cl07813"
                     /db_xref="CDD:263474"
     misc_feature    81204..81584
                     /gene="yacD"
                     /locus_tag="BSU00720"
                     /note="PPIC-type PPIASE domain; Region: Rotamase_2;
                     pfam13145"
                     /db_xref="CDD:257517"
     gene            81771..82697
                     /gene="cysK"
                     /locus_tag="BSU00730"
                     /db_xref="GeneID:936636"
     CDS             81771..82697
                     /gene="cysK"
                     /locus_tag="BSU00730"
                     /EC_number="2.5.1.47"
                     /function="16.3: Control"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11390694, 16267287,
                     16513748; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase"
                     /protein_id="NP_387954.1"
                     /db_xref="GI:16077141"
                     /db_xref="GeneID:936636"
                     /translation="MVRVANSITELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSV
                     KDRIGLAMIEAAEKEGKLKAGNTIIEPTSGNTGIGLAMVAAAKGLKAILVMPDTMSME
                     RRNLLRAYGAELVLTPGAEGMKGAIKKAEELAEKHGYFVPQQFNNPSNPEIHRQTTGK
                     EIVEQFGDDQLDAFVAGIGTGGTITGAGEVLKEAYPSIKIYAVEPSDSPVLSGGKPGP
                     HKIQGIGAGFVPDILNTEVYDEIFPVKNEEAFEYARRAAREEGILGGISSGAAIYAAL
                     QVAKKLGKGKKVLAIIPSNGERYLSTPLYQFD"
     misc_feature    81777..82688
                     /gene="cysK"
                     /locus_tag="BSU00730"
                     /note="cysteine synthase; Region: PLN02565"
                     /db_xref="CDD:166206"
     misc_feature    81807..82673
                     /gene="cysK"
                     /locus_tag="BSU00730"
                     /note="CBS_like: This subgroup includes Cystathionine
                     beta-synthase (CBS) and Cysteine synthase. CBS is a unique
                     heme-containing enzyme that catalyzes a pyridoxal
                     5'-phosphate (PLP)-dependent condensation of serine and
                     homocysteine to give cystathionine; Region: CBS_like;
                     cd01561"
                     /db_xref="CDD:107204"
     misc_feature    order(81819..81827,81864..81866,81882..81884,81888..81890,
                     82014..82016,82023..82025,82071..82076,82083..82088,
                     82095..82100,82260..82265,82539..82547,82551..82559,
                     82629..82631,82659..82661,82668..82670)
                     /gene="cysK"
                     /locus_tag="BSU00730"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:107204"
     misc_feature    order(81903..81905,81993..81995,82302..82319,82437..82439,
                     82569..82571,82647..82652)
                     /gene="cysK"
                     /locus_tag="BSU00730"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:107204"
     misc_feature    81903..81905
                     /gene="cysK"
                     /locus_tag="BSU00730"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107204"
     gene            82864..84276
                     /gene="pabB"
                     /locus_tag="BSU00740"
                     /db_xref="GeneID:936926"
     CDS             82864..84276
                     /gene="pabB"
                     /locus_tag="BSU00740"
                     /EC_number="2.6.1.85"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 16605270, 17114263, 2123867, 9084182; Product
                     type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="para-aminobenzoate synthase component 1"
                     /protein_id="NP_387955.1"
                     /db_xref="GI:16077142"
                     /db_xref="GeneID:936926"
                     /translation="MAQRRPAGKKIPFQKDSFLQQFEKLAQSRKHHVLLESARGGRYS
                     IAGLDPIATVKGKDGITTIKHGDEMLFKEGDPLRAFHSWFKTLETETNHEFPDFQGGA
                     IGFLSYDYARYIENFKMLSLDDLETPDIYFLVFDDIAVYDHQEESLWLITHVNGSDQE
                     TADVKLSELEQMWLTELPAVTSREMKPETAGSFAAPFTEDGFSQAVEKIKQYIASGDV
                     FQVNLSIRQSQSLSVHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPELLVSKKGKL
                     LETRPIAGTRSRGKTNEEDEALANELIHNEKERAEHVMLVDLERNDLGRVSRYGSVRV
                     NEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIHAVFPGGTITGAPKVRTMEIIEELE
                     PTRRGLYTGSIGWFGYNHDLQFNIVIRTIYATGGQAFMQSGAGVVIDSVPKHEYKESF
                     KKAFAMQRALELSEEETKIR"
     misc_feature    82909..84267
                     /gene="pabB"
                     /locus_tag="BSU00740"
                     /note="Anthranilate/para-aminobenzoate synthases component
                     I [Amino acid transport and metabolism / Coenzyme
                     metabolism]; Region: TrpE; COG0147"
                     /db_xref="CDD:223225"
     misc_feature    82927..83313
                     /gene="pabB"
                     /locus_tag="BSU00740"
                     /note="Anthranilate synthase component I, N terminal
                     region; Region: Anth_synt_I_N; pfam04715"
                     /db_xref="CDD:252755"
     misc_feature    83455..84219
                     /gene="pabB"
                     /locus_tag="BSU00740"
                     /note="chorismate binding enzyme; Region: Chorismate_bind;
                     pfam00425"
                     /db_xref="CDD:249850"
     gene            84290..84874
                     /gene="pabA"
                     /locus_tag="BSU00750"
                     /db_xref="GeneID:936441"
     CDS             84290..84874
                     /gene="pabA"
                     /locus_tag="BSU00750"
                     /EC_number="2.6.1.85"
                     /EC_number="4.1.3.27"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="amphibolic enzyme subunit from Bacillus subtilis
                     performs both in anthranilate and para-aminobenzoate
                     synthesis"
                     /codon_start=1
                     /transl_table=11
                     /product="para-aminobenzoate/anthranilate synthase
                     glutamine amidotransferase component II"
                     /protein_id="NP_387956.1"
                     /db_xref="GI:16077143"
                     /db_xref="GeneID:936441"
                     /translation="MILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIDEIEELSP
                     DFLMISPGPCSPDEAGISLEAIKHFAGKIPIFGVCLGHQSIAQVFGGDVVRAERLMHG
                     KTSDIEHDGKTIFEGLKNPLVATRYHSLIVKPETLPSCFTVTAQTKEGEIMAIRHNDL
                     PIEGVQFHPESIMTSFGKEMLRNFIETYRKEVIA"
     misc_feature    84290..84844
                     /gene="pabA"
                     /locus_tag="BSU00750"
                     /note="para-aminobenzoate synthase component II;
                     Provisional; Region: PRK08857"
                     /db_xref="CDD:181566"
     misc_feature    84293..84844
                     /gene="pabA"
                     /locus_tag="BSU00750"
                     /note="Type 1 glutamine amidotransferase (GATase1) domain
                     found in Anthranilate synthase; Region:
                     GATase1_Anthranilate_Synthase; cd01743"
                     /db_xref="CDD:153214"
     misc_feature    order(84440..84445,84449..84451,84524..84529,84536..84538,
                     84668..84679)
                     /gene="pabA"
                     /locus_tag="BSU00750"
                     /note="glutamine binding [chemical binding]; other site"
                     /db_xref="CDD:153214"
     misc_feature    order(84524..84526,84791..84793,84797..84799)
                     /gene="pabA"
                     /locus_tag="BSU00750"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:153214"
     gene            84874..85755
                     /gene="pabC"
                     /locus_tag="BSU00760"
                     /db_xref="GeneID:936944"
     CDS             84874..85755
                     /gene="pabC"
                     /locus_tag="BSU00760"
                     /EC_number="4.1.3.38"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the formation of 4-aminobenzoate and
                     pyruvate from 4-amino-4-deoxychorismate"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate lyase"
                     /protein_id="NP_387957.1"
                     /db_xref="GI:16077144"
                     /db_xref="GeneID:936944"
                     /translation="MIYVNGRYMEEKDAVLSPFDHGFLYGIGVFETFRLYEGCPFLLD
                     WHIERLERALKDLQIEYTVSKHEILEMLDKLLKLNDIKDGNARVRLNISAGISDKGFV
                     AQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRRNTPEGSFRLKSHHYLNNMYAKREI
                     GNDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLDTGILDGVTRRFIIENAKDI
                     GLELKTGRYELEALLTADEAWMTNSVLEIIPFTKIEEVNYGSQSGEATSALQLLYKKE
                     IKNMIHEKGGRAWRSTQ"
     misc_feature    84931..85692
                     /gene="pabC"
                     /locus_tag="BSU00760"
                     /note="ADCL_like: 4-Amino-4-deoxychorismate lyase:  is a
                     member of the fold-type IV of PLP dependent enzymes that
                     converts 4-amino-4-deoxychorismate (ADC) to
                     p-aminobenzoate and pyruvate.  Based on the information
                     available from the crystal structure, most...; Region:
                     ADCL_like; cd01559"
                     /db_xref="CDD:238800"
     misc_feature    order(85018..85020,85309..85311,85408..85410)
                     /gene="pabC"
                     /locus_tag="BSU00760"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:238800"
     misc_feature    85309..85311
                     /gene="pabC"
                     /locus_tag="BSU00760"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238800"
     gene            85737..86594
                     /gene="sul"
                     /locus_tag="BSU00770"
                     /db_xref="GeneID:936256"
     CDS             85737..86594
                     /gene="sul"
                     /locus_tag="BSU00770"
                     /EC_number="2.5.1.15"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 11007651, 2123867; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="NP_387958.1"
                     /db_xref="GI:16077145"
                     /db_xref="GeneID:936256"
                     /translation="MAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGKY
                     DSLDKALLHAKEMIDDGAHIIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVP
                     ISVDTYKASVADEAVKAGASIINDIWGAKHDPKMASVAAEHNVPIVLMHNRPERNYND
                     LLPDMLSDLMESVKIAVEAGVDEKNIILDPGIGFAKTYHDNLAVMNKLEIFSGLGYPV
                     LLATSRKRFIGRVLDLPPEERAEGTGATVCLGIQKGCDIVRVHDVKQIARMAKMMDAM
                     LNKGGVHHG"
     misc_feature    85791..86588
                     /gene="sul"
                     /locus_tag="BSU00770"
                     /note="Dihydropteroate synthase and related enzymes
                     [Coenzyme metabolism]; Region: FolP; COG0294"
                     /db_xref="CDD:223371"
     misc_feature    85809..86558
                     /gene="sul"
                     /locus_tag="BSU00770"
                     /note="DHPS subgroup of Pterin binding enzymes. DHPS
                     (dihydropteroate synthase), a functional homodimer,
                     catalyzes the condensation of p-aminobenzoic acid (pABA)
                     in the de novo biosynthesis of folate, which is an
                     essential cofactor in both nucleic acid and...; Region:
                     DHPS; cd00739"
                     /db_xref="CDD:238380"
     misc_feature    order(85830..85832,86052..86054,86109..86111,86115..86117,
                     86184..86186,86301..86303,86397..86399,86409..86411,
                     86511..86513,86517..86519)
                     /gene="sul"
                     /locus_tag="BSU00770"
                     /note="substrate binding pocket [chemical binding]; other
                     site"
                     /db_xref="CDD:238380"
     misc_feature    order(86340..86342,86352..86357,86469..86471,86481..86483,
                     86493..86495,86538..86543)
                     /gene="sul"
                     /locus_tag="BSU00770"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:238380"
     misc_feature    86403..86411
                     /gene="sul"
                     /locus_tag="BSU00770"
                     /note="inhibitor binding site; inhibition site"
                     /db_xref="CDD:238380"
     gene            86587..86949
                     /gene="folB"
                     /locus_tag="BSU00780"
                     /db_xref="GeneID:937976"
     CDS             86587..86949
                     /gene="folB"
                     /locus_tag="BSU00780"
                     /EC_number="4.1.2.25"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 16188473, 17176045, 17388809; Product type e :
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="NP_387959.1"
                     /db_xref="GI:16077146"
                     /db_xref="GeneID:937976"
                     /translation="MDKVYVEGMEFYGYHGVFTEENKLGQRFKVDLTAELDLSKAGQT
                     DDLEQTINYAELYHVCKDIVEGEPVKLVETLAERIAGTVLGKFQPVQQCTVKVIKPDP
                     PIPGHYKSVAIEITRKKS"
     misc_feature    86587..86940
                     /gene="folB"
                     /locus_tag="BSU00780"
                     /note="Dihydroneopterin aldolase (DHNA) and
                     7,8-dihydroneopterin triphosphate epimerase domain
                     (DHNTPE); these enzymes have been designated folB and
                     folX, respectively. Folate derivatives are essential
                     cofactors in the biosynthesis of purines, pyrimidines,
                     and...; Region: DHNA_DHNTPE; cd00534"
                     /db_xref="CDD:238298"
     misc_feature    order(86590..86622,86638..86664,86887..86892,86905..86931)
                     /gene="folB"
                     /locus_tag="BSU00780"
                     /note="homooctamer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238298"
     misc_feature    order(86632..86640,86647..86649,86794..86805,86881..86883,
                     86923..86925)
                     /gene="folB"
                     /locus_tag="BSU00780"
                     /note="active site"
                     /db_xref="CDD:238298"
     gene            86946..87449
                     /gene="folK"
                     /locus_tag="BSU00790"
                     /db_xref="GeneID:936940"
     CDS             86946..87449
                     /gene="folK"
                     /locus_tag="BSU00790"
                     /EC_number="2.7.6.3"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 17029412; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine pyrophosphokinase"
                     /protein_id="NP_387960.1"
                     /db_xref="GI:16077147"
                     /db_xref="GeneID:936940"
                     /translation="MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYET
                     DPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREVRWGPRTADLDILLF
                     NRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVD
                     EFVHSES"
     misc_feature    86958..87341
                     /gene="folK"
                     /locus_tag="BSU00790"
                     /note="7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
                     (HPPK). Folate derivatives are essential cofactors in the
                     biosynthesis of purines, pyrimidines, and amino acids as
                     well as formyl-tRNA. Mammalian cells are able to utilize
                     pre-formed folates after...; Region: HPPK; cd00483"
                     /db_xref="CDD:238269"
     misc_feature    order(86973..86975,87075..87080,87084..87086,87108..87110,
                     87114..87116,87159..87161,87171..87173,87180..87182,
                     87195..87197,87201..87203,87213..87215,87222..87224,
                     87231..87233,87237..87242,87282..87284,87291..87296,
                     87309..87311,87315..87317)
                     /gene="folK"
                     /locus_tag="BSU00790"
                     /note="catalytic center binding site [active]"
                     /db_xref="CDD:238269"
     misc_feature    order(87159..87161,87171..87173,87180..87182,87195..87197,
                     87201..87203,87222..87224,87237..87242,87282..87284,
                     87291..87296,87309..87311)
                     /gene="folK"
                     /locus_tag="BSU00790"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:238269"
     gene            87401..87610
                     /gene="yazB"
                     /locus_tag="BSU00800"
                     /db_xref="GeneID:936295"
     CDS             87401..87610
                     /gene="yazB"
                     /locus_tag="BSU00800"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pr:  regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="NP_387961.1"
                     /db_xref="GI:16077148"
                     /db_xref="GeneID:936295"
                     /translation="MEAEIWGRRIRAFRKLKGYTQEGFAKALGISVSILGEIERGNRL
                     PSAAIIQDAADVLNISADELAPPEK"
     misc_feature    87419..>87607
                     /gene="yazB"
                     /locus_tag="BSU00800"
                     /note="Predicted transcriptional regulators
                     [Transcription]; Region: HipB; COG1396"
                     /db_xref="CDD:224314"
     misc_feature    87419..87592
                     /gene="yazB"
                     /locus_tag="BSU00800"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; Region: HTH_XRE; cd00093"
                     /db_xref="CDD:238045"
     misc_feature    order(87431..87433,87443..87445,87518..87520)
                     /gene="yazB"
                     /locus_tag="BSU00800"
                     /note="non-specific DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238045"
     misc_feature    order(87440..87442,87515..87517)
                     /gene="yazB"
                     /locus_tag="BSU00800"
                     /note="salt bridge; other site"
                     /db_xref="CDD:238045"
     misc_feature    order(87461..87466,87497..87499,87506..87508,87518..87523)
                     /gene="yazB"
                     /locus_tag="BSU00800"
                     /note="sequence-specific DNA binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238045"
     gene            87634..88635
                     /gene="dusB"
                     /locus_tag="BSU00810"
                     /db_xref="GeneID:936924"
     CDS             87634..88635
                     /gene="dusB"
                     /locus_tag="BSU00810"
                     /EC_number="1.-.-.-"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.3: Control"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 11983710, 15698474; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="NP_387962.1"
                     /db_xref="GI:16077149"
                     /db_xref="GeneID:936924"
                     /translation="MFKIGDIQLKNRVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVS
                     DKAILYNNARTMGMLYIDEREKPLSLQIFGGKKETLVEAAKFVDQNTTADIIDINMGC
                     PVPKITKCDAGAKWLLDPDKIYEMVSAVVDAVNKPVTVKMRMGWDEDHIFAVKNAQAV
                     ERAGGKAVALHGRTRVQMYEGTANWDIIKEVKQSVSIPVIGNGDVKTPQDAKRMLDET
                     GVDGVMIGRAALGNPWMIYRTVQYLETGKLKEEPQVREKMAVCKLHLDRLIDLKGENV
                     AVREMRKHAAWYLKGVKGNANVRNEINHCETREEFVQLLDAFTVEVEAKELQNAKVG"
     misc_feature    87643..88602
                     /gene="dusB"
                     /locus_tag="BSU00810"
                     /note="putative TIM-barrel protein, nifR3 family; Region:
                     nifR3_yhdG; TIGR00737"
                     /db_xref="CDD:129820"
     misc_feature    87667..88365
                     /gene="dusB"
                     /locus_tag="BSU00810"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; Region:
                     DUS_like_FMN; cd02801"
                     /db_xref="CDD:239200"
     misc_feature    order(87679..87687,87757..87759,87844..87846,87928..87930,
                     88054..88056,88144..88146,88237..88239,88243..88245,
                     88309..88314)
                     /gene="dusB"
                     /locus_tag="BSU00810"
                     /note="FMN binding site [chemical binding]; other site"
                     /db_xref="CDD:239200"
     misc_feature    order(87844..87846,87937..87942,88054..88056,88060..88062,
                     88141..88146,88150..88155,88240..88245,88312..88314)
                     /gene="dusB"
                     /locus_tag="BSU00810"
                     /note="active site"
                     /db_xref="CDD:239200"
     misc_feature    order(87937..87939,88060..88062,88144..88146,88150..88152)
                     /gene="dusB"
                     /locus_tag="BSU00810"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239200"
     misc_feature    order(87940..87942,88054..88056,88141..88143,88153..88155,
                     88240..88245)
                     /gene="dusB"
                     /locus_tag="BSU00810"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:239200"
     gene            88727..90226
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /db_xref="GeneID:936911"
     CDS             88727..90226
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /EC_number="6.1.1.6"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="class II; LysRS2; catalyzes a two-step reaction,
                     first charging a lysine molecule by linking its carboxyl
                     group to the alpha-phosphate of ATP, followed by transfer
                     of the aminoacyl-adenylate to its tRNA; in Methanosarcina
                     barkeri, LysRS2 charges both tRNA molecules for lysine
                     that exist in this organism and in addition can charge the
                     tRNAPyl with lysine in the presence of LysRS1"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="NP_387963.1"
                     /db_xref="GI:16077150"
                     /db_xref="GeneID:936911"
                     /translation="MSQEEHNHEELNDQLQVRRDKMNQLRDNGIDPFGARFERTHQSQ
                     EVISAYQDLTKEELEEKAIEVTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVG
                     DDQYEIFKSSDLGDLIGVTGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVE
                     QRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARP
                     FITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIEL
                     YEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQIDLKPEWKRIHMVDAVKEATG
                     VDFWEEVTVEQAREYAKEHEVEIKDSMTVGHIINEFFEQKIEETLIQPTFIYGHPVEI
                     SPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREAGNDEAH
                     LMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMRQR"
     misc_feature    88751..90223
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /note="lysyl-tRNA synthetase; Reviewed; Region: lysS;
                     PRK00484"
                     /db_xref="CDD:234778"
     misc_feature    88916..89236
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /note="LysRS_N: N-terminal, anticodon recognition domain
                     of lysyl-tRNA synthetases (LysRS). These enzymes are
                     homodimeric class 2b aminoacyl-tRNA synthetases (aaRSs).
                     This domain is a beta-barrel domain (OB fold) involved in
                     binding the tRNA anticodon stem-loop; Region: LysRS_N;
                     cd04322"
                     /db_xref="CDD:239817"
     misc_feature    order(88931..88936,88985..88990,89075..89077,89153..89155,
                     89162..89170)
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:239817"
     misc_feature    order(88943..88945,88949..88954,88970..88972,89003..89005,
                     89009..89011,89063..89065,89105..89107,89123..89125)
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /note="putative anticodon binding site; other site"
                     /db_xref="CDD:239817"
     misc_feature    89243..90220
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /note="Lys_tRNA synthetase (LysRS) class II core domain.
                     Class II LysRS is a dimer which attaches a lysine to the
                     3' OH group of ribose of the appropriate tRNA. Its
                     assignment to class II aaRS is based upon its structure
                     and the presence of three...; Region: LysRS_core; cd00775"
                     /db_xref="CDD:238398"
     misc_feature    89339..89353
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /note="motif 1; other site"
                     /db_xref="CDD:238398"
     misc_feature    order(89435..89437,89501..89503,89507..89509,89525..89527,
                     89537..89539,89954..89956,89975..89977,89984..89986,
                     89996..89998,90152..90154)
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /note="active site"
                     /db_xref="CDD:238398"
     misc_feature    89498..89509
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /note="motif 2; other site"
                     /db_xref="CDD:238398"
     misc_feature    90143..90154
                     /gene="lysS"
                     /locus_tag="BSU00820"
                     /note="motif 3; other site"
                     /db_xref="CDD:238398"
     gene            90536..92089
                     /gene="rrnJ-16S"
                     /locus_tag="BSU_rRNA_6"
                     /db_xref="GeneID:936409"
     rRNA            90536..92089
                     /gene="rrnJ-16S"
                     /locus_tag="BSU_rRNA_6"
                     /product="ribosomal RNA-16S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936409"
     gene            92254..95181
                     /gene="rrnJ-23S"
                     /locus_tag="BSU_rRNA_7"
                     /db_xref="GeneID:936612"
     rRNA            92254..95181
                     /gene="rrnJ-23S"
                     /locus_tag="BSU_rRNA_7"
                     /product="ribosomal RNA-23S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936612"
     gene            95237..95354
                     /gene="rrnJ-5S"
                     /locus_tag="BSU_rRNA_8"
                     /db_xref="GeneID:936652"
     rRNA            95237..95354
                     /gene="rrnJ-5S"
                     /locus_tag="BSU_rRNA_8"
                     /product="ribosomal RNA-5S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936652"
     gene            95375..95450
                     /gene="trnJ-Val"
                     /locus_tag="BSU_tRNA_12"
                     /db_xref="GeneID:936902"
     tRNA            95375..95450
                     /gene="trnJ-Val"
                     /locus_tag="BSU_tRNA_12"
                     /product="tRNA-Val"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936902"
     gene            95455..95530
                     /gene="trnJ-Thr"
                     /locus_tag="BSU_tRNA_13"
                     /db_xref="GeneID:936811"
     tRNA            95455..95530
                     /gene="trnJ-Thr"
                     /locus_tag="BSU_tRNA_13"
                     /product="tRNA-Thr"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936811"
     gene            95567..95642
                     /gene="trnJ-Lys"
                     /locus_tag="BSU_tRNA_14"
                     /db_xref="GeneID:936901"
     tRNA            95567..95642
                     /gene="trnJ-Lys"
                     /locus_tag="BSU_tRNA_14"
                     /product="tRNA-Lys"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936901"
     gene            95649..95731
                     /gene="trnJ-Leu1"
                     /locus_tag="BSU_tRNA_15"
                     /db_xref="GeneID:2914251"
     tRNA            95649..95731
                     /gene="trnJ-Leu1"
                     /locus_tag="BSU_tRNA_15"
                     /product="tRNA-Leu"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914251"
     gene            95772..95846
                     /gene="trnJ-Gly"
                     /locus_tag="BSU_tRNA_16"
                     /db_xref="GeneID:936900"
     tRNA            95772..95846
                     /gene="trnJ-Gly"
                     /locus_tag="BSU_tRNA_16"
                     /product="tRNA-Gly"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936900"
     gene            95861..95946
                     /gene="trnJ-Leu2"
                     /locus_tag="BSU_tRNA_17"
                     /db_xref="GeneID:2914249"
     tRNA            95861..95946
                     /gene="trnJ-Leu2"
                     /locus_tag="BSU_tRNA_17"
                     /product="tRNA-Leu"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914249"
     gene            95956..96032
                     /gene="trnJ-Arg"
                     /locus_tag="BSU_tRNA_18"
                     /db_xref="GeneID:936780"
     tRNA            95956..96032
                     /gene="trnJ-Arg"
                     /locus_tag="BSU_tRNA_18"
                     /product="tRNA-Arg"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936780"
     gene            96060..96136
                     /gene="trnJ-Pro"
                     /locus_tag="BSU_tRNA_19"
                     /db_xref="GeneID:936611"
     tRNA            96060..96136
                     /gene="trnJ-Pro"
                     /locus_tag="BSU_tRNA_19"
                     /product="tRNA-Pro"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936611"
     gene            96146..96221
                     /gene="trnJ-Ala"
                     /locus_tag="BSU_tRNA_20"
                     /db_xref="GeneID:2914268"
     tRNA            96146..96221
                     /gene="trnJ-Ala"
                     /locus_tag="BSU_tRNA_20"
                     /product="tRNA-Ala"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914268"
     gene            96392..97945
                     /gene="rrnW-16S"
                     /locus_tag="BSU_rRNA_9"
                     /db_xref="GeneID:936880"
     rRNA            96392..97945
                     /gene="rrnW-16S"
                     /locus_tag="BSU_rRNA_9"
                     /product="ribosomal RNA-16S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936880"
     gene            98110..101037
                     /gene="rrnW-23S"
                     /locus_tag="BSU_rRNA_10"
                     /db_xref="GeneID:936651"
     rRNA            98110..101037
                     /gene="rrnW-23S"
                     /locus_tag="BSU_rRNA_10"
                     /product="ribosomal RNA-23S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:936651"
     gene            101093..101211
                     /gene="rrnW-5S"
                     /locus_tag="BSU_rRNA_11"
                     /db_xref="GeneID:2914266"
     rRNA            101093..101211
                     /gene="rrnW-5S"
                     /locus_tag="BSU_rRNA_11"
                     /product="ribosomal RNA-5S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914266"
     gene            101449..101913
                     /gene="ctsR"
                     /locus_tag="BSU00830"
                     /db_xref="GeneID:936883"
     CDS             101449..101913
                     /gene="ctsR"
                     /locus_tag="BSU00830"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11069659, 12618461,
                     16163393, 9852015; Product type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator CtsR"
                     /protein_id="NP_387964.1"
                     /db_xref="GI:16077151"
                     /db_xref="GeneID:936883"
                     /translation="MGHNISDIIEQYLKRVLDQNGKEILEIKRSEIADKFQCVPSQIN
                     YVINTRFTSERGYIVESKRGGGGYIRIIKIKMNNEVVLINNIISQINTHLSQAASDDI
                     ILRLLEDKVISEREAKMMVSVMDRSVLHIDLPERDELRARMMKAMLTSLKLK"
     misc_feature    101452..101910
                     /gene="ctsR"
                     /locus_tag="BSU00830"
                     /note="Transcriptional repressor of class III stress genes
                     [Transcription]; Region: CtsR; COG4463"
                     /db_xref="CDD:226869"
     gene            101927..102484
                     /gene="mcsA"
                     /locus_tag="BSU00840"
                     /db_xref="GeneID:936845"
     CDS             101927..102484
                     /gene="mcsA"
                     /locus_tag="BSU00840"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 16163393; Product type f:
                     factor"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387965.1"
                     /db_xref="GI:16077152"
                     /db_xref="GeneID:936845"
                     /translation="MICQECHERPATFHFTKVVNGEKIEVHICEQCAKENSDSYGISA
                     NQGFSIHNLLSGLLNMDSSFQNAGTQMFSHSEQISACPKCGMTFQQFRKIGRFGCSEC
                     YKTFHSNITPILRKVHSGNTVHAGKIPKRIGGNLHVRRQIDMLKKELESLIHQEEFEN
                     AAHVRDQIRLLEQSLKSTDSEEEQE"
     misc_feature    101927..102466
                     /gene="mcsA"
                     /locus_tag="BSU00840"
                     /note="Modulator of heat shock repressor CtsR, McsA
                     [Signal transduction    mechanisms]; Region: COG3880"
                     /db_xref="CDD:226397"
     misc_feature    102344..102445
                     /gene="mcsA"
                     /locus_tag="BSU00840"
                     /note="UvrB/uvrC motif; Region: UVR; pfam02151"
                     /db_xref="CDD:251123"
     gene            102484..103575
                     /gene="mcsB"
                     /locus_tag="BSU00850"
                     /db_xref="GeneID:936939"
     CDS             102484..103575
                     /gene="mcsB"
                     /locus_tag="BSU00850"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 16163393, 17380125; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP:guanido phosphotransferase YacI"
                     /protein_id="NP_387966.1"
                     /db_xref="GI:16077153"
                     /db_xref="GeneID:936939"
                     /translation="MSLKHFIQDALSSWMKQKGPESDIVLSSRIRLARNFEHIRFPTR
                     YSNEEASSIIQQFEDQFSEQEIPGIGKFVLIRMNDAQPLEKRVLVEKHLISPNLTESP
                     FGGCLLSENEEVSVMLNEEDHIRIQCLFPGFQLLEAMKAANQVDDWIEEKVDYAFNEQ
                     RGYLTSCPTNVGTGLRASVMMHLPALVLTRQINRIIPAINQLGLVVRGIYGEGSEAVG
                     NIFQISNQITLGKSEQDIVEDLNSVAAQLIEQERSAREAIYQTSKIELEDRVYRSYGV
                     LSNCRMIESKETAKCLSDVRLGIDLGIIKGLSSNILNELMILTQPGFLQQYSGGALRP
                     NERDIRRAALIRERLHLEMNGKRQEDESI"
     misc_feature    102493..103527
                     /gene="mcsB"
                     /locus_tag="BSU00850"
                     /note="ATP:guanido phosphotransferase; Provisional;
                     Region: PRK01059"
                     /db_xref="CDD:234894"
     misc_feature    102547..103245
                     /gene="mcsB"
                     /locus_tag="BSU00850"
                     /note="Phosphagen (guanidino) kinases found in bacteria;
                     Region: bacterial_phosphagen_kinase; cd07930"
                     /db_xref="CDD:153077"
     misc_feature    order(102562..102564,102568..102570,102574..102576,
                     102757..102759,102832..102834,102856..102858,
                     103009..103011,103015..103023,103102..103104,
                     103108..103110,103114..103119,103147..103149)
                     /gene="mcsB"
                     /locus_tag="BSU00850"
                     /note="ADP binding site [chemical binding]; other site"
                     /db_xref="CDD:153077"
     misc_feature    order(102844..102846,102982..102984,103120..103125)
                     /gene="mcsB"
                     /locus_tag="BSU00850"
                     /note="phosphagen binding site; other site"
                     /db_xref="CDD:153077"
     misc_feature    order(103093..103137,103141..103158)
                     /gene="mcsB"
                     /locus_tag="BSU00850"
                     /note="substrate specificity loop; other site"
                     /db_xref="CDD:153077"
     gene            103572..106004
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /db_xref="GeneID:938481"
     CDS             103572..106004
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /function="16.6: Maintain"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 12354604, 15529410,
                     16525504; Product type f: factor"
                     /codon_start=1
                     /transl_table=11
                     /product="negative regulator of genetic competence
                     ClpC/MecB"
                     /protein_id="NP_387967.1"
                     /db_xref="GI:16077154"
                     /db_xref="GeneID:938481"
                     /translation="MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEG
                     IAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSY
                     VGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
                     PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIA
                     EGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIIL
                     FIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRF
                     QPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAI
                     DLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLR
                     EQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKLLNMENILHS
                     RVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDE
                     ESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHP
                     DVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNH
                     KDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQDLS
                     IELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVED
                     GEFVVKTTAKTN"
     misc_feature    103575..105980
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="Clp protease ATP binding subunit; Region: clpC;
                     CHL00095"
                     /db_xref="CDD:214361"
     misc_feature    103620..103778
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="Clp amino terminal domain; Region: Clp_N;
                     pfam02861"
                     /db_xref="CDD:251573"
     misc_feature    103848..104000
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="Clp amino terminal domain; Region: Clp_N;
                     pfam02861"
                     /db_xref="CDD:251573"
     misc_feature    104118..104576
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="The AAA+ (ATPases Associated with a wide variety of
                     cellular Activities) superfamily represents an ancient
                     group of ATPases belonging to the ASCE (for additional
                     strand, catalytic E) division of the P-loop NTPase fold.
                     The ASCE division also includes ABC; Region: AAA; cd00009"
                     /db_xref="CDD:99707"
     misc_feature    104193..104216
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="Walker A motif; other site"
                     /db_xref="CDD:99707"
     misc_feature    order(104196..104219,104406..104408,104517..104519)
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:99707"
     misc_feature    104394..104411
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="Walker B motif; other site"
                     /db_xref="CDD:99707"
     misc_feature    104568..104570
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="arginine finger; other site"
                     /db_xref="CDD:99707"
     misc_feature    104820..104927
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="UvrB/uvrC motif; Region: UVR; pfam02151"
                     /db_xref="CDD:251123"
     misc_feature    105177..105575
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="The AAA+ (ATPases Associated with a wide variety of
                     cellular Activities) superfamily represents an ancient
                     group of ATPases belonging to the ASCE (for additional
                     strand, catalytic E) division of the P-loop NTPase fold.
                     The ASCE division also includes ABC; Region: AAA; cd00009"
                     /db_xref="CDD:99707"
     misc_feature    105204..105227
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="Walker A motif; other site"
                     /db_xref="CDD:99707"
     misc_feature    order(105207..105230,105420..105422,105546..105548)
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:99707"
     misc_feature    105408..105425
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="Walker B motif; other site"
                     /db_xref="CDD:99707"
     misc_feature    105711..105980
                     /gene="clpC"
                     /locus_tag="BSU00860"
                     /note="C-terminal, D2-small domain, of ClpB protein;
                     Region: ClpB_D2-small; smart01086"
                     /db_xref="CDD:198154"
     gene            106096..107472
                     /gene="radA"
                     /locus_tag="BSU00870"
                     /db_xref="GeneID:936872"
     CDS             106096..107472
                     /gene="radA"
                     /locus_tag="BSU00870"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Sms; stabilizes the strand-invasion intermediate
                     during the DNA repair; involved in recombination of donor
                     DNA and plays an important role in DNA damage repair after
                     exposure to mutagenic agents"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="NP_387968.1"
                     /db_xref="GI:16077155"
                     /db_xref="GeneID:936872"
                     /translation="MAKTKSKFICQSCGYESPKWMGKCPGCGAWNTMVEEMIKKAPAN
                     RRAAFSHSVQTVQKPSPITSIETSEEPRVKTQLGEFNRVLGGGVVKGSLVLIGGDPGI
                     GKSTLLLQVSAQLSGSSNSVLYISGEESVKQTKLRADRLGINNPSLHVLSETDMEYIS
                     SAIQEMNPSFVVVDSIQTVYQSDITSAPGSVSQVRECTAELMKIAKTKGIPIFIVGHV
                     TKEGSIAGPRLLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEMGIFEMREEGLTE
                     VLNPSEIFLEERSAGSAGSSITASMEGTRPILVEIQALISPTSFGNPRRMATGIDHNR
                     VSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAIVISIASSFRDTPPNPADC
                     FIGEVGLTGEVRRVSRIEQRVKEAAKLGFKRMIIPAANLDGWTKPKGIEVIGVANVAE
                     ALRTSLGG"
     misc_feature    106096..107454
                     /gene="radA"
                     /locus_tag="BSU00870"
                     /note="DNA repair protein RadA; Provisional; Region:
                     PRK11823"
                     /db_xref="CDD:236994"
     misc_feature    106117..107238
                     /gene="radA"
                     /locus_tag="BSU00870"
                     /note="Sms (bacterial radA) DNA repair protein. This
                     protein is not related to archael radA any more than is to
                     other RecA-like NTPases. Sms has a role in recombination
                     and recombinational repair and is responsible for the
                     stabilization or processing of...; Region: Sms; cd01121"
                     /db_xref="CDD:238541"
     misc_feature    106387..106410
                     /gene="radA"
                     /locus_tag="BSU00870"
                     /note="Walker A motif/ATP binding site; other site"
                     /db_xref="CDD:238541"
     misc_feature    order(106390..106392,106402..106410,106465..106467,
                     106471..106473,106615..106620)
                     /gene="radA"
                     /locus_tag="BSU00870"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:238541"
     misc_feature    106606..106617
                     /gene="radA"
                     /locus_tag="BSU00870"
                     /note="Walker B motif; other site"
                     /db_xref="CDD:238541"
     misc_feature    <107176..107385
                     /gene="radA"
                     /locus_tag="BSU00870"
                     /note="Subunit ChlI of Mg-chelatase; Region: ChlI;
                     pfam13541"
                     /db_xref="CDD:257860"
     gene            107476..108558
                     /gene="yacK"
                     /locus_tag="BSU00880"
                     /db_xref="GeneID:936868"
     CDS             107476..108558
                     /gene="yacK"
                     /locus_tag="BSU00880"
                     /function="16.6: Maintain"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="non-specific DNA-binding; scans chromosomes during
                     sporulation for DNA-damage; delays initiation of
                     sporulation; participates in a checkpoint signaling
                     cascade for cell-cycle progression and DNA repair"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA integrity scanning protein DisA"
                     /protein_id="NP_387969.1"
                     /db_xref="GI:16077156"
                     /db_xref="GeneID:936868"
                     /translation="MEKEKKGAKHELDLSSILQFVAPGTPLRAGMENVLRANTGGLIV
                     VGYNDKVKEVVDGGFHINTAFSPAHLYELAKMDGAIILSDSGQKILYANTQLMPDATI
                     SSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQENMKYTLKDIGFILTKANQAI
                     QTLEKYKTILDKTINALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTE
                     GHLIKLQVIELITDMEEEAALFIKDYVKEKIKDPFVLLKELQDMSSYDLLDDSIVYKL
                     LGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGVLPRIIEASAEELDEVEG
                     IGEVRAQKIKKGLKRLQEKHYLDRQL"
     misc_feature    107512..108555
                     /gene="yacK"
                     /locus_tag="BSU00880"
                     /note="DNA integrity scanning protein DisA; Provisional;
                     Region: PRK13482"
                     /db_xref="CDD:237395"
     misc_feature    107554..107907
                     /gene="yacK"
                     /locus_tag="BSU00880"
                     /note="DisA bacterial checkpoint controller
                     nucleotide-binding; Region: DisA_N; pfam02457"
                     /db_xref="CDD:251307"
     misc_feature    107911..108336
                     /gene="yacK"
                     /locus_tag="BSU00880"
                     /note="DisA bacterial checkpoint controller linker region;
                     Region: DisA-linker; pfam10635"
                     /db_xref="CDD:256098"
     misc_feature    <108409..>108504
                     /gene="yacK"
                     /locus_tag="BSU00880"
                     /note="H3TH domains of structure-specific 5' nucleases (or
                     flap endonuclease-1-like) involved in DNA replication,
                     repair, and recombination; Region:
                     H3TH_StructSpec-5'-nucleases; cl14815"
                     /db_xref="CDD:265460"
     gene            108674..109774
                     /gene="yacL"
                     /locus_tag="BSU00890"
                     /db_xref="GeneID:936863"
     CDS             108674..109774
                     /gene="yacL"
                     /locus_tag="BSU00890"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pm:  membrane component"
                     /codon_start=1
                     /transl_table=11
                     /product="PIN and TRAM-domain containing protein YacL"
                     /protein_id="NP_387970.1"
                     /db_xref="GI:16077157"
                     /db_xref="GeneID:936863"
                     /translation="MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSA
                     AIGAIIFFLISIWGTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVNVI
                     PLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQKKKGTADEEH
                     EVQDKKLKILDTSVIIDGRIADICQTGFLEGVIVIPQFVLEELQHIADSSDVLKRNRG
                     RRGLDILNRIQKELDIEVEIYEGDFEDIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCE
                     LQKVAVLNINDLANAVKPVVLPGEEMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNY
                     IGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL"
     misc_feature    108674..109756
                     /gene="yacL"
                     /locus_tag="BSU00890"
                     /note="Integral membrane protein (PIN domain superfamily)
                     [General function prediction only]; Region: COG4956"
                     /db_xref="CDD:227292"
     misc_feature    109175..109555
                     /gene="yacL"
                     /locus_tag="BSU00890"
                     /note="PIN domain of Thermus Thermophilus Hb8,
                     uncharacterized Bacillus subtilis YacL, and other
                     bacterial homologs; Region: PIN_YacL; cd09877"
                     /db_xref="CDD:189047"
     misc_feature    order(109184..109186,109277..109279,109421..109423,
                     109475..109477)
                     /gene="yacL"
                     /locus_tag="BSU00890"
                     /note="putative active site [active]"
                     /db_xref="CDD:189047"
     gene            109789..110487
                     /gene="ispD"
                     /locus_tag="BSU00900"
                     /db_xref="GeneID:936855"
     CDS             109789..110487
                     /gene="ispD"
                     /locus_tag="BSU00900"
                     /EC_number="2.7.7.60"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="4-diphosphocytidyl-2C-methyl-D-erythritol synthase;
                     MEP cytidylyltransferase; MCT; catalyzes the formation of
                     4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and
                     2-C-methyl-D-erythritol 4-phosphate; involved in
                     isoprenoid and isopentenyl-PP biosynthesis; forms
                     homodimers"
                     /codon_start=1
                     /transl_table=11
                     /product="2-D-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="NP_387971.1"
                     /db_xref="GI:16077158"
                     /db_xref="GeneID:936855"
                     /translation="MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHR
                     QCDKIILVINEQEREHFQQLLSDYPFQTSIELVAGGDERQHSVYKGLKAVKQEKIVLV
                     HDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQDLQVSETIERSSLWAVQT
                     PQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTS
                     AEAIMESESGNKHV"
     misc_feature    109801..110445
                     /gene="ispD"
                     /locus_tag="BSU00900"
                     /note="CDP-ME synthetase is involved in
                     mevalonate-independent isoprenoid production; Region:
                     CDP-ME_synthetase; cd02516"
                     /db_xref="CDD:133009"
     misc_feature    order(109810..109812,109816..109833,109852..109854,
                     110026..110037,110044..110046,110098..110106,
                     110413..110415)
                     /gene="ispD"
                     /locus_tag="BSU00900"
                     /note="substrate binding site; other site"
                     /db_xref="CDD:133009"
     misc_feature    order(110107..110109,110164..110166,110188..110190,
                     110194..110196,110245..110262,110338..110343,
                     110347..110352,110359..110361,110377..110388,
                     110398..110403)
                     /gene="ispD"
                     /locus_tag="BSU00900"
                     /note="dimer interface; other site"
                     /db_xref="CDD:133009"
     gene            110480..110956
                     /gene="ispF"
                     /locus_tag="BSU00910"
                     /db_xref="GeneID:936634"
     CDS             110480..110956
                     /gene="ispF"
                     /locus_tag="BSU00910"
                     /EC_number="4.6.1.12"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the conversion of
                     4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate
                     into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate"
                     /codon_start=1
                     /transl_table=11
                     /product="2-D-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="NP_387972.1"
                     /db_xref="GI:16077159"
                     /db_xref="GeneID:936634"
                     /translation="MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHT
                     VADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQ
                     KPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG"
     misc_feature    110486..110944
                     /gene="ispF"
                     /locus_tag="BSU00910"
                     /note="MECDP_synthase
                     (2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase),
                     encoded by the ispF gene, catalyzes the formation of
                     2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEC) in the
                     non-mevalonate deoxyxylulose (DOXP) pathway for isoprenoid
                     biosynthesis; Region: MECDP_synthase; cd00554"
                     /db_xref="CDD:100025"
     misc_feature    order(110486..110491,110495..110497,110501..110503,
                     110507..110515,110525..110527,110630..110632,
                     110636..110641,110645..110650,110759..110761,
                     110765..110767,110771..110773,110792..110794,
                     110798..110800,110864..110866,110870..110875,
                     110882..110890,110927..110929,110933..110935,
                     110939..110941)
                     /gene="ispF"
                     /locus_tag="BSU00910"
                     /note="homotrimer interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:100025"
     misc_feature    order(110504..110506,110510..110512,110606..110608)
                     /gene="ispF"
                     /locus_tag="BSU00910"
                     /note="zinc binding site [ion binding]; other site"
                     /db_xref="CDD:100025"
     misc_feature    order(110648..110650,110654..110656,110780..110785,
                     110789..110800,110873..110881)
                     /gene="ispF"
                     /locus_tag="BSU00910"
                     /note="CDP-binding sites; other site"
                     /db_xref="CDD:100025"
     gene            111047..112498
                     /gene="gltX"
                     /locus_tag="BSU00920"
                     /db_xref="GeneID:936862"
     CDS             111047..112498
                     /gene="gltX"
                     /locus_tag="BSU00920"
                     /EC_number="6.1.1.17"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Charges one glutamine molecule and pairs it to its
                     corresponding RNA trinucleotide during protein
                     translation"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="NP_387973.1"
                     /db_xref="GI:16077160"
                     /db_xref="GeneID:936862"
                     /translation="MGNEVRVRYAPSPTGHLHIGNARTALFNYLFARNQGGKFIIRVE
                     DTDKKRNIEGGEQSQLNYLKWLGIDWDESVDVGGEYGPYRQSERNDIYKVYYEELLEK
                     GLAYKCYCTEEELEKEREEQIARGEMPRYSGKHRDLTQEEQEKFIAEGRKPSIRFRVP
                     EGKVIAFNDIVKGEISFESDGIGDFVIVKKDGTPTYNFAVAIDDYLMKMTHVLRGEDH
                     ISNTPKQIMIYQAFGWDIPQFGHMTLIVNESRKKLSKRDESIIQFIEQYKELGYLPEA
                     LFNFIGLLGWSPVGEEELFTKEQFIEIFDVNRLSKSPALFDMHKLKWVNNQYVKKLDL
                     DQVVELTLPHLQKAGKVGTELSAEEQEWVRKLISLYHEQLSYGAEIVELTDLFFTDEI
                     EYNQEAKAVLEEEQVPEVLSTFAAKLEELEEFTPDNIKASIKAVQKETGHKGKKLFMP
                     IRVAVTGQTHGPELPQSIELIGKETAIQRLKNI"
     misc_feature    111047..112492
                     /gene="gltX"
                     /locus_tag="BSU00920"
                     /note="glutamyl-tRNA synthetase; Reviewed; Region: gltX;
                     PRK01406"
                     /db_xref="CDD:234953"
     misc_feature    111056..112039
                     /gene="gltX"
                     /locus_tag="BSU00920"
                     /note="catalytic core domain of discriminating
                     glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
                     /db_xref="CDD:173905"
     misc_feature    order(111068..111070,111074..111082,111104..111109,
                     111113..111118,111176..111178,111632..111634,
                     111644..111646,111686..111691,111695..111700,
                     111773..111778,111800..111805)
                     /gene="gltX"
                     /locus_tag="BSU00920"
                     /note="active site"
                     /db_xref="CDD:173905"
     misc_feature    111098..111109
                     /gene="gltX"
                     /locus_tag="BSU00920"
                     /note="HIGH motif; other site"
                     /db_xref="CDD:173905"
     misc_feature    111800..111814
                     /gene="gltX"
                     /locus_tag="BSU00920"
                     /note="KMSKS motif; other site"
                     /db_xref="CDD:173905"
     gene            112800..113453
                     /gene="cysE"
                     /locus_tag="BSU00930"
                     /db_xref="GeneID:936831"
     CDS             112800..113453
                     /gene="cysE"
                     /locus_tag="BSU00930"
                     /EC_number="2.3.1.30"
                     /function="16.3: Control"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10939241, 17056751,
                     10737181, 7510287; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="serine acetyltransferase"
                     /protein_id="NP_387974.1"
                     /db_xref="GI:16077161"
                     /db_xref="GeneID:936831"
                     /translation="MFFRMLKEDIDTVFDQDPAARSYFEVILTYSGLHAIWAHRIAHA
                     LYKRKFYFLARLISQVSRFFTGIEIHPGATIGRRFFIDHGMGVVIGETCEIGNNVTVF
                     QGVTLGGTGKEKGKRHPTIKDDALIATGAKVLGSITVGEGSKIGAGSVVLHDVPDFST
                     VVGIPGRVVVQNGKKVRRDLNHQDLPDPVADRFKSLEQQILELKAELEDRKERINQK"
     misc_feature    112815..113300
                     /gene="cysE"
                     /locus_tag="BSU00930"
                     /note="serine O-acetyltransferase; Region: cysE;
                     TIGR01172"
                     /db_xref="CDD:200082"
     misc_feature    <112824..112907
                     /gene="cysE"
                     /locus_tag="BSU00930"
                     /note="Serine acetyltransferase, N-terminal; Region:
                     SATase_N; cl05762"
                     /db_xref="CDD:262653"
     misc_feature    112992..113294
                     /gene="cysE"
                     /locus_tag="BSU00930"
                     /note="Serine acetyltransferase (SAT): SAT catalyzes the
                     CoA-dependent acetylation of the side chain hydroxyl group
                     of L-serine to form O-acetylserine, as the first step of a
                     two-step biosynthetic pathway in bacteria and plants
                     leading to the formation of...; Region: LbH_SAT; cd03354"
                     /db_xref="CDD:100045"
     misc_feature    order(112995..112997,113001..113003,113046..113048,
                     113148..113150,113238..113240,113247..113249,
                     113253..113255)
                     /gene="cysE"
                     /locus_tag="BSU00930"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:100045"
     misc_feature    order(113043..113048,113103..113108,113124..113129,
                     113148..113153,113184..113186,113229..113231,
                     113235..113240,113247..113249,113253..113255,
                     113277..113279,113292..113294)
                     /gene="cysE"
                     /locus_tag="BSU00930"
                     /note="active site"
                     /db_xref="CDD:100045"
     misc_feature    order(113043..113048,113124..113126,113148..113153)
                     /gene="cysE"
                     /locus_tag="BSU00930"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:100045"
     misc_feature    order(113103..113108,113124..113129,113184..113186,
                     113229..113231,113235..113240,113247..113249,
                     113253..113255,113277..113279,113292..113294)
                     /gene="cysE"
                     /locus_tag="BSU00930"
                     /note="CoA binding site [chemical binding]; other site"
                     /db_xref="CDD:100045"
     gene            113450..114850
                     /gene="cysS"
                     /locus_tag="BSU00940"
                     /db_xref="GeneID:936859"
     CDS             113450..114850
                     /gene="cysS"
                     /locus_tag="BSU00940"
                     /EC_number="6.1.1.16"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes a two-step reaction; charges a cysteine
                     by linking its carboxyl group to the alpha-phosphate of
                     ATP then transfers the aminoacyl-adenylate to its tRNA"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="NP_387975.1"
                     /db_xref="GI:16077162"
                     /db_xref="GeneID:936859"
                     /translation="MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARP
                     AIVYDTVRNYLEYKGYDVQYVSNFTDVDDKLIKAANELGEDVPTISERFIKAYFEDVG
                     ALGCRKADLHPRVMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSI
                     DELRSGARIRVGEKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLG
                     DQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVL
                     VHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTKSAFSRLKTAYSNLQHRLNSST
                     NLTEDDDQWLEKVEEHRKAFEEEMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVI
                     TAFIEMFDRIVSVLGFSLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMN
                     IILEDTAQGTRWKRGE"
     misc_feature    113450..114844
                     /gene="cysS"
                     /locus_tag="BSU00940"
                     /note="cysteinyl-tRNA synthetase; Validated; Region: cysS;
                     PRK00260"
                     /db_xref="CDD:234705"
     misc_feature    113459..114364
                     /gene="cysS"
                     /locus_tag="BSU00940"
                     /note="catalytic core domain of cysteinyl tRNA synthetase;
                     Region: CysRS_core; cd00672"
                     /db_xref="CDD:173899"
     misc_feature    order(113534..113545,113561..113563,113567..113572,
                     113579..113584,113648..113650,113654..113656,
                     114062..114064,114074..114076,114125..114130,
                     114134..114139,114149..114151,114221..114229)
                     /gene="cysS"
                     /locus_tag="BSU00940"
                     /note="active site"
                     /db_xref="CDD:173899"
     misc_feature    113561..113572
                     /gene="cysS"
                     /locus_tag="BSU00940"
                     /note="HIGH motif; other site"
                     /db_xref="CDD:173899"
     misc_feature    114245..114259
                     /gene="cysS"
                     /locus_tag="BSU00940"
                     /note="KMSKS motif; other site"
                     /db_xref="CDD:173899"
     misc_feature    114365..114841
                     /gene="cysS"
                     /locus_tag="BSU00940"
                     /note="Anticodon-binding domain of class Ia aminoacyl tRNA
                     synthetases and similar domains; Region:
                     Anticodon_Ia_like; cl12020"
                     /db_xref="CDD:264512"
     misc_feature    order(114368..114370,114380..114382,114389..114391,
                     114398..114400,114410..114415,114428..114433,
                     114554..114556,114575..114577,114584..114586,
                     114593..114595)
                     /gene="cysS"
                     /locus_tag="BSU00940"
                     /note="tRNA binding surface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:153408"
     misc_feature    order(114398..114400,114407..114412,114428..114433,
                     114593..114595)
                     /gene="cysS"
                     /locus_tag="BSU00940"
                     /note="anticodon binding site; other site"
                     /db_xref="CDD:153408"
     gene            114854..115285
                     /gene="mrnC"
                     /locus_tag="BSU00950"
                     /db_xref="GeneID:936369"
     CDS             114854..115285
                     /gene="mrnC"
                     /locus_tag="BSU00950"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 16014871; Product type e:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="mini-ribonuclease 3"
                     /protein_id="NP_387976.1"
                     /db_xref="GI:16077163"
                     /db_xref="GeneID:936369"
                     /translation="MLEFDTIKDSKQLNGLALAYIGDAIFEVYVRHHLLKQGFTKPND
                     LHKKSSRIVSAKSQAEILFFLQNQSFFTEEEEAVLKRGRNAKSGTTPKNTDVQTYRYS
                     TAFEALLGYLFLEKKEERLSQLVAEAIQFGTSGRKTNESAT"
     misc_feature    114905..115243
                     /gene="mrnC"
                     /locus_tag="BSU00950"
                     /note="RIBOc. Ribonuclease III C terminal domain. This
                     group consists of eukaryotic, bacterial and archeal
                     ribonuclease III (RNAse III) proteins. RNAse III is a
                     double stranded RNA-specific endonuclease. Prokaryotic
                     RNAse III is important in...; Region: RIBOc; cd00593"
                     /db_xref="CDD:238333"
     misc_feature    order(114908..114910,114920..114922,115160..115162,
                     115169..115171)
                     /gene="mrnC"
                     /locus_tag="BSU00950"
                     /note="active site"
                     /db_xref="CDD:238333"
     misc_feature    order(114908..114910,115160..115162,115169..115171)
                     /gene="mrnC"
                     /locus_tag="BSU00950"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:238333"
     misc_feature    order(114911..114916,114923..114925,114932..114937,
                     114944..114949,114953..114961,114986..114988,
                     115190..115192,115217..115219)
                     /gene="mrnC"
                     /locus_tag="BSU00950"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238333"
     gene            115269..116018
                     /gene="rlmB"
                     /locus_tag="BSU00960"
                     /db_xref="GeneID:936861"
     CDS             115269..116018
                     /gene="rlmB"
                     /locus_tag="BSU00960"
                     /EC_number="2.1.1.-"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 11698387, 16014871; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase TrmH"
                     /protein_id="NP_387977.1"
                     /db_xref="GI:16077164"
                     /db_xref="GeneID:936861"
                     /translation="MSQQHDYVIGKNAVIETLKSDRKLYKLWMAENTVKGQAQQVIEL
                     AKKQGITIQYVPRKKLDQMVTGQHQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLIL
                     DELEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVTNLA
                     RTLEEMKERGIWVVGTDASAREDFRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKL
                     PMAGKVTSLNASVAAGLLMYEVYRKRNPVGE"
     misc_feature    115281..116000
                     /gene="rlmB"
                     /locus_tag="BSU00960"
                     /note="rRNA methylase, putative, group 3; Region:
                     rRNA_methyl_3; TIGR00186"
                     /db_xref="CDD:129290"
     misc_feature    115287..115511
                     /gene="rlmB"
                     /locus_tag="BSU00960"
                     /note="RNA 2'-O ribose methyltransferase substrate
                     binding; Region: SpoU_sub_bind; pfam08032"
                     /db_xref="CDD:254595"
     misc_feature    115557..115982
                     /gene="rlmB"
                     /locus_tag="BSU00960"
                     /note="SpoU rRNA Methylase family; Region: SpoU_methylase;
                     pfam00588"
                     /db_xref="CDD:249983"
     gene            116025..116537
                     /gene="yacP"
                     /locus_tag="BSU00970"
                     /db_xref="GeneID:936993"
     CDS             116025..116537
                     /gene="yacP"
                     /locus_tag="BSU00970"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 17114934; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387978.1"
                     /db_xref="GI:16077165"
                     /db_xref="GeneID:936993"
                     /translation="MDILLVDGYNMIGAWPQLKDLKANSFEEARDVLIQKMAEYQSYT
                     GNRVIVVFDAHLVKGLEKKQTNHRVEVIFTKENETADERIEKLAQALNNIATQIHVAT
                     SDYTEQWAIFGQGALRKSARELLREVETIERRIERRVRKITSEKPAGKIALSEEVLKT
                     FEKWRRGDLD"
     misc_feature    116025..116531
                     /gene="yacP"
                     /locus_tag="BSU00970"
                     /note="Predicted RNA-binding protein containing a PIN
                     domain [General function prediction only]; Region:
                     COG3688"
                     /db_xref="CDD:226213"
     gene            116600..117256
                     /gene="sigH"
                     /locus_tag="BSU00980"
                     /db_xref="GeneID:936150"
     CDS             116600..117256
                     /gene="sigH"
                     /locus_tag="BSU00980"
                     /EC_number="2.7.7.6"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="DNA-dependent RNA polymerase catalyzes the
                     transcription of DNA into RNA using the four
                     ribonucleoside triphosphates as substrates"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-H factor"
                     /protein_id="NP_387979.1"
                     /db_xref="GI:16077166"
                     /db_xref="GeneID:936150"
                     /translation="MNLQNNKGKFNKEQFCQLEDEQVIEKVHVGDSDALDYLITKYRN
                     FVRAKARSYFLIGADREDIVQEGMIGLYKSIRDFKEDKLTSFKAFAELCITRQIITAI
                     KTATRQKHIPLNSYASLDKPIFDEESDRTLLDVISGAKTLNPEEMIINQEEFDDIEMK
                     MGELLSDLERKVLVLYLDGRSYQEISDELNRHVKSIDNALQRVKRKLEKYLEIREISL
                     "
     misc_feature    116630..117250
                     /gene="sigH"
                     /locus_tag="BSU00980"
                     /note="RNA polymerase factor sigma-70; Validated; Region:
                     PRK08295"
                     /db_xref="CDD:181361"
     misc_feature    116711..116923
                     /gene="sigH"
                     /locus_tag="BSU00980"
                     /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
                     /db_xref="CDD:252661"
     misc_feature    117086..117220
                     /gene="sigH"
                     /locus_tag="BSU00980"
                     /note="Sigma-70, region 4; Region: Sigma70_r4_2;
                     pfam08281"
                     /db_xref="CDD:203898"
     gene            117349..117498
                     /gene="rpmG"
                     /locus_tag="BSU00990"
                     /db_xref="GeneID:936842"
     CDS             117349..117498
                     /gene="rpmG"
                     /locus_tag="BSU00990"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="in Escherichia coli BM108, a mutation that results
                     in lack of L33 synthesis had no effect on ribosome
                     synthesis or function; there are paralogous genes in
                     several bacterial genomes, and a CXXC motif for zinc
                     binding and an upstream regulation region of the paralog
                     lacking this motif that are regulated by zinc similar to
                     other ribosomal proteins like L31; the proteins in this
                     group have the CXXC motif"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33 2"
                     /protein_id="NP_387980.1"
                     /db_xref="GI:16077167"
                     /db_xref="GeneID:936842"
                     /translation="MRKKITLACKTCGNRNYTTMKSSASAAERLEVKKYCSTCNSHTA
                     HLETK"
     misc_feature    117349..117495
                     /gene="rpmG"
                     /locus_tag="BSU00990"
                     /note="50S ribosomal protein L33; Validated; Region: rpmG;
                     PRK00504"
                     /db_xref="CDD:234783"
     gene            117532..117711
                     /gene="secE"
                     /locus_tag="BSU01000"
                     /db_xref="GeneID:936856"
     CDS             117532..117711
                     /gene="secE"
                     /locus_tag="BSU01000"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="forms a complex with SecY and SecG; SecYEG forms a
                     protein-conducting channel to which secA binds and
                     translocates targeted polypeptides across the cytoplasmic
                     membrane, a process driven by ATP and a proton-motive
                     force"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="NP_387981.1"
                     /db_xref="GI:16077168"
                     /db_xref="GeneID:936856"
                     /translation="MRIMKFFKDVGKEMKKVSWPKGKELTRYTITVISTVIFFVIFFA
                     LLDTGISQLIRLIVE"
     misc_feature    117532..117702
                     /gene="secE"
                     /locus_tag="BSU01000"
                     /note="preprotein translocase subunit SecE; Reviewed;
                     Region: secE; PRK07597"
                     /db_xref="CDD:236066"
     gene            117890..118423
                     /gene="nusG"
                     /locus_tag="BSU01010"
                     /db_xref="GeneID:936851"
     CDS             117890..118423
                     /gene="nusG"
                     /locus_tag="BSU01010"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Modulates Rho-dependent transcription termination"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="NP_387982.1"
                     /db_xref="GI:16077169"
                     /db_xref="GeneID:936851"
                     /translation="MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEE
                     ETDIKNGKKKVVKKKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLL
                     PGEAETILKRMGMDERKTDIDFELKETVKVIDGPFANFTGSIEEIDYDKSKVKVFVNM
                     FGRETPVELEFTQIDKL"
     misc_feature    117890..118420
                     /gene="nusG"
                     /locus_tag="BSU01010"
                     /note="transcription antitermination protein NusG;
                     Validated; Region: nusG; PRK05609"
                     /db_xref="CDD:180161"
     misc_feature    117899..118228
                     /gene="nusG"
                     /locus_tag="BSU01010"
                     /note="Bacterial N-Utilization Substance G (NusG)
                     N-terminal (NGN) domain, subgroup 1; Region: NGN_Bact_1;
                     cd09891"
                     /db_xref="CDD:193580"
     misc_feature    order(117908..117910,118010..118012,118070..118072,
                     118079..118081,118085..118087,118190..118192,
                     118214..118216)
                     /gene="nusG"
                     /locus_tag="BSU01010"
                     /note="putative homodimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:193580"
     misc_feature    118250..118417
                     /gene="nusG"
                     /locus_tag="BSU01010"
                     /note="NusG contains an NGN domain at its N-terminus and
                     KOW motif at its C-terminus; Region: KOW_NusG; cd06091"
                     /db_xref="CDD:240515"
     misc_feature    order(118286..118300,118307..118309,118343..118345,
                     118370..118378,118382..118393,118403..118408)
                     /gene="nusG"
                     /locus_tag="BSU01010"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:240515"
     misc_feature    118286..118297
                     /gene="nusG"
                     /locus_tag="BSU01010"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:240515"
     gene            118591..119016
                     /gene="rplK"
                     /locus_tag="BSU01020"
                     /db_xref="GeneID:936838"
     CDS             118591..119016
                     /gene="rplK"
                     /locus_tag="BSU01020"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds directly to 23S ribosomal RNA"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="NP_387983.2"
                     /db_xref="GI:255767019"
                     /db_xref="GeneID:936838"
                     /translation="MAKKVVKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNA
                     RTADQAGLIIPVEISVYEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATVKR
                     DKVREIAETKMPDLNAADVEAAMRMVEGTARSMGIVIED"
     misc_feature    118621..119013
                     /gene="rplK"
                     /locus_tag="BSU01020"
                     /note="50S ribosomal protein L11; Validated; Region: rplK;
                     PRK00140"
                     /db_xref="CDD:234661"
     misc_feature    118621..119007
                     /gene="rplK"
                     /locus_tag="BSU01020"
                     /note="Ribosomal protein L11. Ribosomal protein L11,
                     together with proteins L10 and L7/L12, and 23S rRNA, form
                     the L7/L12 stalk on the surface of the large subunit of
                     the ribosome. The homologous eukaryotic cytoplasmic
                     protein is also called 60S ribosomal...; Region:
                     Ribosomal_L11; cd00349"
                     /db_xref="CDD:100101"
     misc_feature    order(118666..118668,118678..118680)
                     /gene="rplK"
                     /locus_tag="BSU01020"
                     /note="putative thiostrepton binding site; other site"
                     /db_xref="CDD:100101"
     misc_feature    order(118678..118680,118810..118818,118828..118830,
                     118849..118851,118924..118926,118939..118947,
                     118957..118959,118966..118971,118978..118983,
                     118987..118995)
                     /gene="rplK"
                     /locus_tag="BSU01020"
                     /note="23S rRNA interface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:100101"
     misc_feature    order(118759..118761,118765..118776,118786..118788,
                     118792..118797,118927..118932,118939..118944)
                     /gene="rplK"
                     /locus_tag="BSU01020"
                     /note="L7/L12 interface [polypeptide binding]; other site"
                     /db_xref="CDD:100101"
     misc_feature    order(118867..118869,118876..118878)
                     /gene="rplK"
                     /locus_tag="BSU01020"
                     /note="L25 interface [polypeptide binding]; other site"
                     /db_xref="CDD:100101"
     gene            119111..119809
                     /gene="rplA"
                     /locus_tag="BSU01030"
                     /db_xref="GeneID:936843"
     CDS             119111..119809
                     /gene="rplA"
                     /locus_tag="BSU01030"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="in Escherichia coli and Methanococcus, this protein
                     autoregulates expression; the binding site in the mRNA
                     mimics the binding site in the 23S rRNA"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="NP_387984.2"
                     /db_xref="GI:255767020"
                     /db_xref="GeneID:936843"
                     /translation="MAKKGKKYVEAAKLVDRSKAYDVSEAVALVKKTNTAKFDATVEV
                     AFRLGVDPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADFVGDTDYIN
                     KIQQGWFDFDVIVATPDMMGEVGKIGRVLGPKGLMPNPKTGTVTFEVEKAIGEIKAGK
                     VEYRVDKAGNIHVPIGKVSFEDEKLVENFTTMYDTILKAKPAAAKGVYVKNVAVTSTM
                     GPGVKVDSSTFNVK"
     misc_feature    119177..119782
                     /gene="rplA"
                     /locus_tag="BSU01030"
                     /note="Ribosomal protein L1.  The L1 protein, located near
                     the E-site of the ribosome, forms part of the L1 stalk
                     along with 23S rRNA.  In bacteria and archaea, L1
                     functions both as a ribosomal protein that binds rRNA, and
                     as a translation repressor that binds...; Region:
                     Ribosomal_L1; cd00403"
                     /db_xref="CDD:238235"
     misc_feature    order(119216..119224,119231..119233,119237..119239,
                     119243..119245,119249..119251,119612..119614,
                     119618..119620,119624..119626,119762..119767,
                     119771..119773)
                     /gene="rplA"
                     /locus_tag="BSU01030"
                     /note="mRNA/rRNA interface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:238235"
     gene            119855..119995
                     /locus_tag="BSU_misc_RNA_3"
                     /db_xref="GeneID:8302991"
     misc_RNA        119855..119995
                     /locus_tag="BSU_misc_RNA_3"
                     /product="L10_leader"
                     /inference="profile:Rfam:8.1"
                     /db_xref="GeneID:8302991"
     gene            120061..120561
                     /gene="rplJ"
                     /locus_tag="BSU01040"
                     /db_xref="GeneID:936153"
     CDS             120061..120561
                     /gene="rplJ"
                     /locus_tag="BSU01040"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds the two ribosomal protein L7/L12 dimers and
                     anchors them to the large ribosomal subunit"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="NP_387985.2"
                     /db_xref="GI:255767021"
                     /db_xref="GeneID:936153"
                     /translation="MSSAIETKKVVVEEIASKLKESKSTIIVDYRGLNVSEVTELRKQ
                     LREANVEFKVYKNTMTRRAVEQAELNGLNDFLTGPNAIAFSTEDVVAPAKVLNDFAKN
                     HEALEIKAGVIEGKVSTVEEVKALAELPSREGLLSMLLSVLQAPVRNLALAAKAVAEQ
                     KEEQGA"
     misc_feature    120073..120540
                     /gene="rplJ"
                     /locus_tag="BSU01040"
                     /note="Ribosomal protein L10 family, L10 subfamily;
                     composed of bacterial 50S ribosomal protein and eukaryotic
                     mitochondrial 39S ribosomal protein, L10. L10 occupies the
                     L7/L12 stalk of the ribosome. The N-terminal domain (NTD)
                     of L10 interacts with L11 protein...; Region:
                     Ribosomal_L10; cd05797"
                     /db_xref="CDD:240223"
     misc_feature    order(120082..120087,120094..120096,120226..120237,
                     120244..120246)
                     /gene="rplJ"
                     /locus_tag="BSU01040"
                     /note="23S rRNA interface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:240223"
     misc_feature    order(120328..120330,120397..120399,120406..120408,
                     120454..120456,120463..120468,120475..120480,
                     120484..120501,120505..120513,120520..120525,
                     120529..120534,120538..120540)
                     /gene="rplJ"
                     /locus_tag="BSU01040"
                     /note="Interface with L7/L12 ribosomal proteins
                     [polypeptide binding]; other site"
                     /db_xref="CDD:240223"
     gene            120607..120978
                     /gene="rplL"
                     /locus_tag="BSU01050"
                     /db_xref="GeneID:935952"
     CDS             120607..120978
                     /gene="rplL"
                     /locus_tag="BSU01050"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="present in two forms; L12 is normal, while L7 is
                     aminoacylated at the N-terminal serine; the only multicopy
                     ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two
                     L12 dimers bind L10; critically important for translation
                     efficiency and fidelity; stimulates GTPase activity of
                     translation factors"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="NP_387986.1"
                     /db_xref="GI:16077173"
                     /db_xref="GeneID:935952"
                     /translation="MALNIEEIIASVKEATVLELNDLVKAIEEEFGVTAAAPVAVAGG
                     AAAGGAAEEQSEFDLILAGAGSQKIKVIKVVREITGLGLKEAKELVDNTPKPLKEGIA
                     KEEAEELKAKLEEVGASVEVK"
     misc_feature    120613..120972
                     /gene="rplL"
                     /locus_tag="BSU01050"
                     /note="Ribosomal protein L7/L12. Ribosomal protein L7/L12
                     refers to the large ribosomal subunit proteins L7 and L12,
                     which are identical except that L7 is acetylated at the N
                     terminus. It is a component of the L7/L12 stalk, which is
                     located at the surface of...; Region: Ribosomal_L7_L12;
                     cd00387"
                     /db_xref="CDD:100102"
     misc_feature    order(120613..120615,120652..120660,120667..120672,
                     120679..120681,120688..120690,120733..120741,
                     120769..120774,120835..120837,120841..120846,
                     120850..120852,120856..120861,120901..120906,
                     120910..120912,120919..120921)
                     /gene="rplL"
                     /locus_tag="BSU01050"
                     /note="core dimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:100102"
     misc_feature    order(120622..120624,120631..120633,120643..120645,
                     120682..120684,120697..120699)
                     /gene="rplL"
                     /locus_tag="BSU01050"
                     /note="peripheral dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:100102"
     misc_feature    order(120664..120666,120673..120678,120688..120690,
                     120697..120699)
                     /gene="rplL"
                     /locus_tag="BSU01050"
                     /note="L10 interface [polypeptide binding]; other site"
                     /db_xref="CDD:100102"
     misc_feature    order(120808..120813,120820..120825,120832..120834,
                     120853..120858,120865..120867)
                     /gene="rplL"
                     /locus_tag="BSU01050"
                     /note="L11 interface [polypeptide binding]; other site"
                     /db_xref="CDD:100102"
     misc_feature    order(120811..120813,120823..120825,120832..120834,
                     120853..120858,120865..120867)
                     /gene="rplL"
                     /locus_tag="BSU01050"
                     /note="putative EF-Tu interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:100102"
     misc_feature    order(120811..120813,120820..120825,120832..120834)
                     /gene="rplL"
                     /locus_tag="BSU01050"
                     /note="putative EF-G interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:100102"
     gene            121068..121673
                     /gene="ybxB"
                     /locus_tag="BSU01060"
                     /db_xref="GeneID:938465"
     CDS             121068..121673
                     /gene="ybxB"
                     /locus_tag="BSU01060"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 17010380; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_387987.1"
                     /db_xref="GI:16077174"
                     /db_xref="GeneID:938465"
                     /translation="MSEHYYSEKPSVKSNKQTWSFRLRNKDFTFTSDSGVFSKKEVDF
                     GSRLLIDSFEEPEVEGGILDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELSNENA
                     EQNGITNVKIYQSDLFSNVDSAQTFASILTNPPIRAGKKVVHAIFEKSAEHLKASGEL
                     WIVIQKKQGAPSAIEKLEELFDEVSVVQKKKGYYIIKAKKV"
     misc_feature    121251..121649
                     /gene="ybxB"
                     /locus_tag="BSU01060"
                     /note="Methyltransferase domain; Region: Methyltransf_31;
                     pfam13847"
                     /db_xref="CDD:258120"
     misc_feature    121251..121559
                     /gene="ybxB"
                     /locus_tag="BSU01060"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cd02440"
                     /db_xref="CDD:100107"
     misc_feature    order(121260..121280,121332..121337,121410..121418,
                     121464..121466)
                     /gene="ybxB"
                     /locus_tag="BSU01060"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     gene            121919..125500
                     /gene="rpoB"
                     /locus_tag="BSU01070"
                     /db_xref="GeneID:936335"
     CDS             121919..125500
                     /gene="rpoB"
                     /locus_tag="BSU01070"
                     /EC_number="2.7.7.6"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="DNA-dependent RNA polymerase catalyzes the
                     transcription of DNA into RNA using the four
                     ribonucleoside triphosphates as substrates; beta subunit
                     is part of the catalytic core which binds with a sigma
                     factor to produce the holoenzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="NP_387988.2"
                     /db_xref="GI:255767022"
                     /db_xref="GeneID:936335"
                     /translation="MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEG
                     LREMFQDISPIEDFTGNLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKE
                     TGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTA
                     TVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALGFGSDQEILDLIGENEYLR
                     NTLDKDNTENSDKALLEIYERLRPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKIN
                     KKLHIKNRLFNQRLAETLVDPETGEILAEKGQILDRRTLDKVLPYLENGIGFRKLYPN
                     GGVVEDEVTLQSIKIFAPTDQEGEQVINVIGNAYIEEEIKNITPADIISSISYFFNLL
                     HGVGDTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLIN
                     IRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGMEVRDVHY
                     SHYGRMCPIETPEGPNIGLINSLSSYAKVNRFGFIETPYRRVDPETGKVTGRIDYLTA
                     DEEDNYVVAQANARLDDEGAFIDDSIVARFRGENTVVSRNRVDYMDVSPKQVVSAATA
                     CIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGTGMEYVSGKDSGAAVICKHPGIV
                     ERVEAKNVWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVVKGE
                     ILADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESE
                     ARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGDLLVGKVTPKGVTELTA
                     EERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDELPPGVNQLVRVYIV
                     QKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPLGVPSRMNIGQVL
                     ELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDGRTGEPFDNRV
                     SVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGA
                     AYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILS
                     GDEEEIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE"
     misc_feature    121925..125371
                     /gene="rpoB"
                     /locus_tag="BSU01070"
                     /note="DNA-directed RNA polymerase subunit beta; Reviewed;
                     Region: rpoB; PRK00405"
                     /db_xref="CDD:234749"
     misc_feature    122003..125350
                     /gene="rpoB"
                     /locus_tag="BSU01070"
                     /note="RNA polymerase beta subunit. RNA polymerases
                     catalyse the DNA dependent polymerization of RNA.
                     Prokaryotes contain a single RNA polymerase compared to
                     three in eukaryotes (not including mitochondrial. and
                     chloroplast polymerases). Each RNA polymerase...; Region:
                     RNA_pol_B_RPB2; cd00653"
                     /db_xref="CDD:238353"
     misc_feature    order(122168..122170,124280..124282,124391..124393,
                     124397..124399,124409..124417,124421..124423)
                     /gene="rpoB"
                     /locus_tag="BSU01070"
                     /note="RPB12 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238353"
     misc_feature    order(123422..123424,123428..123436,123440..123442,
                     123449..123451,123464..123466,123752..123754,
                     123806..123814,123818..123820,124205..124216,
                     124223..124225,124229..124237,124712..124714,
                     124718..124720,124724..124726,124790..124792,
                     124796..124798,124805..124807,124814..124816,
                     124829..124831,124841..124843,124892..124894,
                     124973..124975,124997..125005,125009..125011,
                     125048..125050,125057..125065,125069..125074,
                     125135..125143,125153..125155,125159..125164,
                     125168..125170,125174..125191,125195..125212,
                     125222..125224,125291..125293,125303..125305,
                     125309..125311,125315..125320,125324..125326,
                     125330..125341,125345..125347)
                     /gene="rpoB"
                     /locus_tag="BSU01070"
                     /note="RPB1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238353"
     misc_feature    123557..123760
                     /gene="rpoB"
                     /locus_tag="BSU01070"
                     /note="RNA polymerase beta subunit external 1 domain;
                     Region: RNA_pol_Rpb2_45; pfam10385"
                     /db_xref="CDD:255954"
     misc_feature    order(124094..124099,124190..124192,124196..124198,
                     124259..124261,124268..124270,124739..124741,
                     124778..124780,124859..124864,124868..124870,
                     124961..124963,125012..125014)
                     /gene="rpoB"
                     /locus_tag="BSU01070"
                     /note="RPB10 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238353"
     misc_feature    order(124223..124225,124265..124267,124736..124738,
                     124979..124981)
                     /gene="rpoB"
                     /locus_tag="BSU01070"
                     /note="RPB11 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238353"
     misc_feature    order(124265..124270,124280..124282,124658..124660,
                     124664..124666,124739..124747,124754..124756,
                     124760..124765,124976..124999,125003..125005)
                     /gene="rpoB"
                     /locus_tag="BSU01070"
                     /note="RPB3 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238353"
     gene            125562..129161
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /db_xref="GeneID:935977"
     CDS             125562..129161
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /EC_number="2.7.7.6"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="DNA-dependent RNA polymerase catalyzes the
                     transcription of DNA into RNA using the four
                     ribonucleoside triphosphates as substrates. Subunit beta'
                     binds to sigma factor allowing it to bind to the -10
                     region of the promoter"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="NP_387989.2"
                     /db_xref="GI:255767023"
                     /db_xref="GeneID:935977"
                     /translation="MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKD
                     GLFCERIFGPTKDWECHCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVS
                     HIWYFKGIPSRMGLVLDMSPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLD
                     KYGNKFQASMGAEAIHKLLQDIDLVKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRN
                     SGNKPSWMILDVLPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGA
                     PSIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGK
                     RVDYSGRSVIVVGPHLKMYQCGLPKEMALELFKPFVMKELVEKGLAHNIKSAKRKIER
                     VQPEVWDVLESVIKEHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVCTAYNADF
                     DGDQMAVHVPLSAEAQAEARILMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLERAG
                     AVGEGMVFKNTDEALLAYQNGYVHLHTRVAVAANSLKNVTFTEEQRSKLLITTVGKLV
                     FNEILPESFPYMNEPTKSNIEEKTPDRFFLEKGADVKAVIAQQPINAPFKKGILGKII
                     AEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGVSDIVVLDDKQEILEEAQSKVDN
                     VMKQFRRGLITEEERYERVISIWSAAKDVIQGKLMKSLDELNPIYMMSDSGARGNASN
                     FTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFISTHGARKGLADTALKTADSG
                     YLTRRLVDVAQDVIIRETDCGTDRGILAKPLKEGTETIERLEERLIGRFARKQVKHPE
                     TGEVLVNENELIDEDKALEIVEAGIEEVWIRSAFTCNTPHGVCKRCYGRNLATGSDVE
                     VGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELFEARNPKGQATIT
                     EIDGTVVEINEVRDKQQEIVVQGAVETRSYTAPYNSRLKVAEGDKITRGQVLTEGSID
                     PKELLKVTDLTTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVIDAGDTDV
                     LPGTLLDIHQFTEANKKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQETTRVL
                     TDAAIKGKRDELLGLKENVIIGKLVPAGTGMMKYRKVKPVSNVQPTDDMVPVE"
     misc_feature    125568..129143
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="DNA-directed RNA polymerase subunit beta';
                     Provisional; Region: PRK00566"
                     /db_xref="CDD:234794"
     misc_feature    125574..128012
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="Largest subunit (beta') of bacterial DNA-dependent
                     RNA polymerase (RNAP), N-terminal domain; Region:
                     RNAP_beta'_N; cd01609"
                     /db_xref="CDD:259845"
     misc_feature    order(125574..125600,125604..125606,125616..125618,
                     125625..125636,125670..125672,125676..125678,
                     125727..125729,125760..125762,125817..125822,
                     125826..125837,125868..125870,125874..125876,
                     126243..126245,126255..126257,126261..126263,
                     126270..126275,126279..126281,126285..126287,
                     126294..126299,126447..126449,126507..126509,
                     126516..126521,126537..126599,126603..126605,
                     126639..126644,126651..126656,126663..126668,
                     126672..126677,126720..126722,126798..126800,
                     126810..126812,126819..126824,126828..126833,
                     126861..126866,126879..126881,126906..126914,
                     126921..126923,126933..126956,126963..126965,
                     126975..126980,126993..126995,127035..127043,
                     127050..127052,127062..127064,127077..127079,
                     127503..127508,127512..127547,127728..127730,
                     127746..127748,127764..127766,127779..127781,
                     127788..127793,127803..127805,127818..127823,
                     127842..127844,127860..127883,127887..127892,
                     127899..127904,127908..127916,127920..127928,
                     127932..127937,127965..127967,127974..127976)
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="beta and beta' interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:259845"
     misc_feature    order(125655..125663,125667..125669,125724..125726,
                     125730..125732,125760..125762,125766..125768,
                     125814..125816,125949..125954,126279..126284,
                     126291..126293,126303..126320,126327..126329,
                     126336..126338,126348..126353,126360..126362,
                     126366..126377,126387..126413,126417..126422,
                     126429..126431,126462..126464,126492..126494,
                     126501..126503,126528..126533,126717..126719,
                     126723..126728)
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="beta' and sigma factor interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:259845"
     misc_feature    order(125739..125741,125745..125747,125784..125786,
                     125793..125795)
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="Zn-binding [ion binding]; other site"
                     /db_xref="CDD:259845"
     misc_feature    order(125892..125894,126459..126461,126528..126530,
                     126543..126545,126564..126566,126582..126584,
                     126801..126809,126906..126908,126912..126914,
                     126918..126920,127941..127946,127953..127958)
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="active site region [active]"
                     /db_xref="CDD:259845"
     misc_feature    order(126906..126908,126912..126914,126918..126920)
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="catalytic site [active]"
                     /db_xref="CDD:259845"
     misc_feature    128298..129092
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="Largest subunit (beta') of Bacterial DNA-dependent
                     RNA polymerase (RNAP), C-terminal domain; Region:
                     RNAP_beta'_C; cd02655"
                     /db_xref="CDD:132721"
     misc_feature    order(128301..128306,128310..128312,129084..129086)
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="Rpb1 (beta') - Rpb6 (omega) interaction site
                     [polypeptide binding]; other site"
                     /db_xref="CDD:132721"
     misc_feature    order(128322..128324,128334..128336,129024..129026,
                     129042..129044,129060..129062,129069..129074,
                     129084..129086)
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="Rpb1 (beta') - Rpb2 (beta) interaction site
                     [polypeptide binding]; other site"
                     /db_xref="CDD:132721"
     misc_feature    128367..128393
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="G-loop; other site"
                     /db_xref="CDD:132721"
     misc_feature    order(128448..128450,128934..128936,128979..128984)
                     /gene="rpoC"
                     /locus_tag="BSU01080"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:132721"
     gene            129340..129588
                     /gene="ybxF"
                     /locus_tag="BSU01090"
                     /db_xref="GeneID:936829"
     CDS             129340..129588
                     /gene="ybxF"
                     /locus_tag="BSU01090"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="in Bacillus subtilis this non-essential protein
                     associates with the ribosome"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein L7Ae-like"
                     /protein_id="NP_387990.1"
                     /db_xref="GI:16077177"
                     /db_xref="GeneID:936829"
                     /translation="MSYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSS
                     VVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL"
     misc_feature    129340..129585
                     /gene="ybxF"
                     /locus_tag="BSU01090"
                     /note="putative ribosomal protein L7Ae-like; Provisional;
                     Region: PRK13602"
                     /db_xref="CDD:184174"
     gene            129702..130118
                     /gene="rpsL"
                     /locus_tag="BSU01100"
                     /db_xref="GeneID:936616"
     CDS             129702..130118
                     /gene="rpsL"
                     /locus_tag="BSU01100"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="interacts with and stabilizes bases of the 16S rRNA
                     that are involved in tRNA selection in the A site and with
                     the mRNA backbone; located at the interface of the 30S and
                     50S subunits, it traverses the body of the 30S subunit
                     contacting proteins on the other side; mutations in the
                     S12 gene confer streptomycin resistance"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="NP_387991.2"
                     /db_xref="GI:255767024"
                     /db_xref="GeneID:936616"
                     /translation="MPTINQLIRKGRVSKVENSKSPALNKGYNSFKKEHTNVSSPQKR
                     GVCTRVGTMTPKKPNSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKD
                     LPGVRYHIVRGALDTAGVENRAQGRSKYGTKKPKAK"
     misc_feature    129708..130070
                     /gene="rpsL"
                     /locus_tag="BSU01100"
                     /note="S12-like family, 30S ribosomal protein S12
                     subfamily; S12 is located at the interface of the large
                     and small ribosomal subunits of prokaryotes, chloroplasts
                     and mitochondria, where it plays an important role in both
                     tRNA and ribosomal subunit...; Region: Ribosomal_S12;
                     cd03368"
                     /db_xref="CDD:239466"
     misc_feature    order(129711..129716,129720..129725,129732..129737)
                     /gene="rpsL"
                     /locus_tag="BSU01100"
                     /note="S17 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:239466"
     misc_feature    129711..129713
                     /gene="rpsL"
                     /locus_tag="BSU01100"
                     /note="S8 interaction site; other site"
                     /db_xref="CDD:239466"
     misc_feature    order(129735..129743,129777..129779,129822..129827,
                     129831..129833,129876..129881,129885..129893,
                     129912..129914,129936..129938,129945..129950,
                     129987..129992,130002..130007,130068..130070)
                     /gene="rpsL"
                     /locus_tag="BSU01100"
                     /note="16S rRNA interaction site [nucleotide binding];
                     other site"
                     /db_xref="CDD:239466"
     misc_feature    order(129867..129872,130002..130004)
                     /gene="rpsL"
                     /locus_tag="BSU01100"
                     /note="streptomycin interaction site [chemical binding];
                     other site"
                     /db_xref="CDD:239466"
     misc_feature    129870..129875
                     /gene="rpsL"
                     /locus_tag="BSU01100"
                     /note="23S rRNA interaction site [nucleotide binding];
                     other site"
                     /db_xref="CDD:239466"
     misc_feature    order(129873..129890,129948..129974)
                     /gene="rpsL"
                     /locus_tag="BSU01100"
                     /note="aminoacyl-tRNA interaction site (A-site)
                     [nucleotide binding]; other site"
                     /db_xref="CDD:239466"
     gene            130160..130630
                     /gene="rpsG"
                     /locus_tag="BSU01110"
                     /db_xref="GeneID:935997"
     CDS             130160..130630
                     /gene="rpsG"
                     /locus_tag="BSU01110"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds directly to 16S rRNA where it nucleates
                     assembly of the head domain of the 30S subunit"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="NP_387992.2"
                     /db_xref="GI:255767025"
                     /db_xref="GeneID:935997"
                     /translation="MPRKGPVAKRDVLPDPIYNSKLVSRLINKMMIDGKKGKSQTILY
                     KSFDIIKERTGNDAMEVFEQALKNIMPVLEVKARRVGGANYQVPVEVRPERRTTLGLR
                     WLVNYARLRGEKTMEERLANEILDAANNTGAAVKKREDTHKMAEANKAFAHYRW"
     misc_feature    130160..130627
                     /gene="rpsG"
                     /locus_tag="BSU01110"
                     /note="30S ribosomal protein S7; Validated; Region:
                     PRK05302"
                     /db_xref="CDD:235398"
     gene            130684..132762
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /db_xref="GeneID:936826"
     CDS             130684..132762
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="EF-G; promotes GTP-dependent translocation of the
                     ribosome during translation; many organisms have multiple
                     copies of this gene"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="NP_387993.2"
                     /db_xref="GI:255767026"
                     /db_xref="GeneID:936826"
                     /translation="MAREFSLEKTRNIGIMAHIDAGKTTTTERILFYTGRIHKIGETH
                     EGASQMDWMEQEQERGITITSAATTAQWKGYRVNIIDTPGHVDFTVEVERSLRVLDGA
                     VAVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKIGADFLYSVGTLRDRLQANAH
                     AIQLPIGAEDNFEGIIDLVENVAYFYEDDLGTRSDAKEIPEEYKEQAEELRNSLIEAV
                     CELDEELMDKYLEGEEITIDELKAGIRKGTLNVEFYPVLVGSAFKNKGVQLVLDAVLD
                     YLPAPTDVAAIKGTRPDTNEEIERHSSDEEPFSALAFKVMTDPYVGKLTFFRVYSGTL
                     DSGSYVKNSTKGKRERVGRILQMHANSREEISTVYAGDIAAAVGLKDTTTGDTLCDEK
                     DLVILESMEFPEPVIDVAIEPKSKADQDKMGIALAKLAEEDPTFRTQTNPETGQTIIS
                     GMGELHLDIIVDRMKREFKVEANVGAPQVAYRETFRTGAKVEGKFVRQSGGRGQFGHV
                     WIEFEPNEEGAGFEFENAIVGGVVPREYIPAVQAGLEDALENGVLAGFPLIDIKAKLF
                     DGSYHDVDSNEMAFKVAASMALKNAVSKCNPVLLEPIMKVEVVIPEEYMGDIMGDITS
                     RRGRVEGMEARGNAQVVRAMVPLAEMFGYATALRSNTQGRGTFTMHMDHYEEVPKSVA
                     EEIIKKNKGE"
     misc_feature    130684..132756
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="elongation factor G; Reviewed; Region: PRK00007"
                     /db_xref="CDD:234569"
     misc_feature    130717..131526
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="Elongation factor G (EF-G) family involved in both
                     the elongation and ribosome recycling phases of protein
                     synthesis; Region: EF-G; cd01886"
                     /db_xref="CDD:206673"
     misc_feature    130732..130755
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="G1 box; other site"
                     /db_xref="CDD:206673"
     misc_feature    order(130735..130737,130741..130743,130753..130758,
                     130765..130767,130774..130779,130879..130884,
                     130936..130941,131008..131013,131119..131121,
                     131131..131133)
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="putative GEF interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206673"
     misc_feature    order(130741..130743,130747..130758,131086..131091,
                     131095..131097,131461..131469)
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206673"
     misc_feature    130822..130881
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206673"
     misc_feature    130867..130869
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="G2 box; other site"
                     /db_xref="CDD:206673"
     misc_feature    130924..130935
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="G3 box; other site"
                     /db_xref="CDD:206673"
     misc_feature    130930..130986
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206673"
     misc_feature    131086..131097
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="G4 box; other site"
                     /db_xref="CDD:206673"
     misc_feature    131461..131469
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="G5 box; other site"
                     /db_xref="CDD:206673"
     misc_feature    131605..131853
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="EFG_mtEFG_II: this subfamily represents the domain
                     II of elongation factor G (EF-G) in bacteria and, the
                     C-terminus of mitochondrial Elongation factor G1 (mtEFG1)
                     and G2 (mtEFG2)_like proteins found in eukaryotes. During
                     the process of peptide synthesis...; Region: EFG_mtEFG_II;
                     cd04088"
                     /db_xref="CDD:239755"
     misc_feature    131887..132108
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="Elongation Factor G, domain II; Region: EFG_II;
                     pfam14492"
                     /db_xref="CDD:258632"
     misc_feature    132124..132471
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="EFG_mtEFG1_IV: domains similar to domain IV of the
                     bacterial translational elongation factor (EF) EF-G.
                     Included in this group is a domain of mitochondrial
                     Elongation factor G1 (mtEFG1) proteins homologous to
                     domain IV of EF-G. Eukaryotic cells harbor 2...; Region:
                     EFG_mtEFG1_IV; cd01434"
                     /db_xref="CDD:238715"
     misc_feature    132484..132717
                     /gene="fusA"
                     /locus_tag="BSU01120"
                     /note="EFG_mtEFG_C: domains similar to the C-terminal
                     domain of the bacterial translational elongation factor
                     (EF) EF-G.  Included in this group is the C-terminus of
                     mitochondrial Elongation factor G1 (mtEFG1) and G2
                     (mtEFG2) proteins. Eukaryotic cells harbor 2...; Region:
                     EFG_mtEFG_C; cd03713"
                     /db_xref="CDD:239683"
     gene            132882..134072
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /db_xref="GeneID:935965"
     CDS             132882..134072
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /EC_number="3.6.5.3"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="NP_387994.1"
                     /db_xref="GI:16077181"
                     /db_xref="GeneID:935965"
                     /translation="MAKEKFDRSKSHANIGTIGHVDHGKTTLTAAITTVLHKKSGKGT
                     AMAYDQIDGAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDG
                     AILVVSAADGPMPQTREHILLSKNVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLS
                     EYDFPGDDVPVVKGSALKALEGDAEWEAKIFELMDAVDEYIPTPERDTEKPFMMPVED
                     VFSITGRGTVATGRVERGQVKVGDEVEIIGLQEENKKTTVTGVEMFRKLLDYAEAGDN
                     IGALLRGVSREEIQRGQVLAKPGTITPHSKFKAEVYVLSKEEGGRHTPFFSNYRPQFY
                     FRTTDVTGIIHLPEGVEMVMPGDNTEMNVELISTIAIEEGTRFSIREGGRTVGSGVVS
                     TITE"
     misc_feature    132882..134069
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="elongation factor Tu; Reviewed; Region: PRK00049"
                     /db_xref="CDD:234596"
     misc_feature    132915..133493
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="Elongation Factor Tu (EF-Tu) GTP-binding proteins;
                     Region: EF_Tu; cd01884"
                     /db_xref="CDD:206671"
     misc_feature    132936..132959
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="G1 box; other site"
                     /db_xref="CDD:206671"
     misc_feature    order(132939..132941,132945..132947,132957..132962,
                     132969..132971,132978..132983,132993..132995,
                     133080..133085,133137..133142,133209..133214,
                     133218..133229,133236..133238,133329..133331,
                     133341..133343,133419..133424)
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="GEF interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:206671"
     misc_feature    order(132945..132962,133023..133025,133290..133295,
                     133299..133301,133404..133412)
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206671"
     misc_feature    133050..133082
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206671"
     misc_feature    133068..133070
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="G2 box; other site"
                     /db_xref="CDD:206671"
     misc_feature    133125..133136
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="G3 box; other site"
                     /db_xref="CDD:206671"
     misc_feature    133131..133187
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206671"
     misc_feature    133290..133301
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="G4 box; other site"
                     /db_xref="CDD:206671"
     misc_feature    133404..133412
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="G5 box; other site"
                     /db_xref="CDD:206671"
     misc_feature    133515..133778
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="EFTU_II: Elongation factor Tu domain II. Elongation
                     factors Tu (EF-Tu) are three-domain GTPases with an
                     essential function in the elongation phase of mRNA
                     translation. The GTPase center of EF-Tu is in the
                     N-terminal domain (domain I), also known as the...;
                     Region: EFTU_II; cd03697"
                     /db_xref="CDD:239668"
     misc_feature    133785..134054
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="Domain III of elongation factor (EF) Tu. Ef-Tu
                     consists of three structural domains, designated I, II and
                     III. Domain III adopts a beta barrel structure. Domain III
                     is involved in binding to both charged tRNA and binding to
                     elongation factor Ts (EF-Ts); Region: EFTU_III; cd03707"
                     /db_xref="CDD:239678"
     misc_feature    order(133821..133823,133827..133835,133887..133889,
                     134007..134015,134043..134045)
                     /gene="tufA"
                     /locus_tag="BSU01130"
                     /note="Antibiotic Binding Site [chemical binding]; other
                     site"
                     /db_xref="CDD:239678"
     gene            134171..135127
                     /gene="ybaC"
                     /locus_tag="BSU01140"
                     /db_xref="GeneID:936866"
     CDS             134171..135127
                     /gene="ybaC"
                     /locus_tag="BSU01140"
                     /EC_number="3.4.11.5"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase YbaC"
                     /protein_id="NP_387995.2"
                     /db_xref="GI:255767027"
                     /db_xref="GeneID:936866"
                     /translation="MIPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPGT
                     PQIGYVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTINHFIKDTIQVTQWLLA
                     HFSKSKLYLAGHSWGSILALHVLQQRPDLFYTYYGISQVVNPQDEESTAYQHIREISE
                     SKKASILSFLTRFIGAPPWKQDIQHLIYRFCVELTRGGFTHRHRQSLAVLFQMLTGNE
                     YGVRNMHSFLNGLRFSKKHLTDELYRFNAFTSVPSIKVPCVFISGKHDLIVPAEISKQ
                     YYQELEAPEKRWFQFENSAHTPHIEEPSLFANTLSRHARHHL"
     misc_feature    134264..135121
                     /gene="ybaC"
                     /locus_tag="BSU01140"
                     /note="Predicted hydrolases or acyltransferases
                     (alpha/beta hydrolase superfamily) [General function
                     prediction only]; Region: MhpC; COG0596"
                     /db_xref="CDD:223669"
     misc_feature    134273..>134560
                     /gene="ybaC"
                     /locus_tag="BSU01140"
                     /note="Putative lysophospholipase; Region: Hydrolase_4;
                     cl19140"
                     /db_xref="CDD:267493"
     gene            135364..135672
                     /gene="rpsJ"
                     /locus_tag="BSU01150"
                     /db_xref="GeneID:936825"
     CDS             135364..135672
                     /gene="rpsJ"
                     /locus_tag="BSU01150"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="NusE; involved in assembly of the 30S subunit; in
                     the ribosome, this protein is involved in the binding of
                     tRNA; in Escherichia coli this protein was also found to
                     be involved in transcription antitermination; NusB/S10
                     heterodimers bind boxA sequences in the leader RNA of rrn
                     operons which is required for antitermination; binding of
                     NusB/S10 to boxA nucleates assembly of the antitermination
                     complex"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="NP_387996.1"
                     /db_xref="GI:16077183"
                     /db_xref="GeneID:936825"
                     /translation="MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPT
                     EKSVYTILRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDALMRLDLPSGVDIEIKL
                     "
     misc_feature    135364..135669
                     /gene="rpsJ"
                     /locus_tag="BSU01150"
                     /note="30S ribosomal protein S10; Reviewed; Region: rpsJ;
                     PRK00596"
                     /db_xref="CDD:179076"
     gene            135712..136341
                     /gene="rplC"
                     /locus_tag="BSU01160"
                     /db_xref="GeneID:936239"
     CDS             135712..136341
                     /gene="rplC"
                     /locus_tag="BSU01160"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds directly near the 3' end of the 23S rRNA,
                     where it nucleates assembly of the 50S subunit; essential
                     for peptidyltransferase activity; mutations in this gene
                     confer resistance to tiamulin"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="NP_387997.1"
                     /db_xref="GI:16077184"
                     /db_xref="GeneID:936239"
                     /translation="MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAEND
                     GYEAIQLGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVEMDAYEVGQEVKVEIF
                     SAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNRVFKGKLL
                     PGRMGGEQITVQNLEIVKVDAERNLLLIKGNVPGAKKSLITVKSAVKSK"
     misc_feature    135712..136338
                     /gene="rplC"
                     /locus_tag="BSU01160"
                     /note="50S ribosomal protein L3; Validated; Region: rplC;
                     PRK00001"
                     /db_xref="CDD:234564"
     gene            136369..136992
                     /gene="rplD"
                     /locus_tag="BSU01170"
                     /db_xref="GeneID:936690"
     CDS             136369..136992
                     /gene="rplD"
                     /locus_tag="BSU01170"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="L4 is important during the early stages of 50S
                     assembly; it initially binds near the 5' end of the 23S
                     rRNA"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="NP_387998.1"
                     /db_xref="GI:16077185"
                     /db_xref="GeneID:936690"
                     /translation="MPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASL
                     RQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLP
                     KKVRRLAIKSVLSSKVIDNNIIVLEDLTLDTAKTKEMAAILKGLSVEKKALIVTADAN
                     EAVALSARNIPGVTVVEANGINVLDVVNHEKLLITKAAVEKVEEVLA"
     misc_feature    136372..136989
                     /gene="rplD"
                     /locus_tag="BSU01170"
                     /note="50S ribosomal protein L4; Provisional; Region:
                     rplD; PRK05319"
                     /db_xref="CDD:235404"
     gene            136992..137279
                     /gene="rplW"
                     /locus_tag="BSU01180"
                     /db_xref="GeneID:936820"
     CDS             136992..137279
                     /gene="rplW"
                     /locus_tag="BSU01180"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds third domain of 23S rRNA and protein L29;
                     part of exit tunnel"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="NP_387999.2"
                     /db_xref="GI:255767028"
                     /db_xref="GeneID:936820"
                     /translation="MKDPRDVLKRPVITERSADLMTEKKYTFEVDVRANKTEVKDAVE
                     SIFGVKVDKVNIMNYKGKSKRVGRYTGMTSRRRKAIVKLTADSKEIEIFEA"
     misc_feature    137004..137276
                     /gene="rplW"
                     /locus_tag="BSU01180"
                     /note="50S ribosomal protein L23; Reviewed; Region: rplW;
                     PRK05738"
                     /db_xref="CDD:235586"
     gene            137311..138144
                     /gene="rplB"
                     /locus_tag="BSU01190"
                     /db_xref="GeneID:936817"
     CDS             137311..138144
                     /gene="rplB"
                     /locus_tag="BSU01190"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="one of the primary rRNA-binding proteins; required
                     for association of the 30S and 50S subunits to form the
                     70S ribosome, for tRNA binding and peptide bond formation"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="NP_388000.2"
                     /db_xref="GI:255767029"
                     /db_xref="GeneID:936817"
                     /translation="MAIKKYKPTSNGRRGMTTSDFAEITTDKPEKSLLAPLHKKGGRN
                     NQGKLTVRHQGGGHKRQYRVIDFKRDKDGIPGRVATVEYDPNRSANIALINYADGEKR
                     YILAPKGIQVGTEIMSGPEADIKVGNALPLINIPVGTVVHNIELKPGKGGQLVRSAGT
                     SAQVLGKEGKYVLVRLNSGEVRMILSACRASIGQVGNEQHELINIGKAGRSRWKGIRP
                     TVRGSVMNPNDHPHGGGEGRAPIGRKSPMSPWGKPTLGFKTRKKKNKSDKFIVRRRKN
                     K"
     misc_feature    137311..138141
                     /gene="rplB"
                     /locus_tag="BSU01190"
                     /note="50S ribosomal protein L2; Validated; Region: rplB;
                     PRK09374"
                     /db_xref="CDD:236488"
     misc_feature    137434..137664
                     /gene="rplB"
                     /locus_tag="BSU01190"
                     /note="Ribosomal Proteins L2, RNA binding domain; Region:
                     Ribosomal_L2; pfam00181"
                     /db_xref="CDD:249659"
     misc_feature    137680..138069
                     /gene="rplB"
                     /locus_tag="BSU01190"
                     /note="Ribosomal Proteins L2, C-terminal domain; Region:
                     Ribosomal_L2_C; pfam03947"
                     /db_xref="CDD:202823"
     gene            138202..138480
                     /gene="rpsS"
                     /locus_tag="BSU01200"
                     /db_xref="GeneID:936818"
     CDS             138202..138480
                     /gene="rpsS"
                     /locus_tag="BSU01200"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="protein S19 forms a complex with S13 that binds
                     strongly to the 16S ribosomal RNA"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="NP_388001.1"
                     /db_xref="GI:16077188"
                     /db_xref="GeneID:936818"
                     /translation="MARSLKKGPFVDGHLMTKIEKLNETDKKQVVKTWSRRSTIFPQF
                     IGHTIAVYDGRKHVPVFISEDMVGHKLGEFAPTRTYKGHASDDKKTRR"
     misc_feature    138202..138477
                     /gene="rpsS"
                     /locus_tag="BSU01200"
                     /note="30S ribosomal protein S19; Reviewed; Region: rpsS;
                     PRK00357"
                     /db_xref="CDD:178985"
     gene            138497..138838
                     /gene="rplV"
                     /locus_tag="BSU01210"
                     /db_xref="GeneID:938123"
     CDS             138497..138838
                     /gene="rplV"
                     /locus_tag="BSU01210"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds specifically to 23S rRNA during the early
                     stages of 50S assembly; makes contact with all 6 domains
                     of the 23S rRNA in the assembled 50S subunit and ribosome;
                     mutations in this gene result in erythromycin resistance;
                     located near peptidyl-transferase center"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="NP_388002.1"
                     /db_xref="GI:16077189"
                     /db_xref="GeneID:938123"
                     /translation="MQAKAVARTVRIAPRKARLVMDLIRGKQVGEAVSILNLTPRAAS
                     PIIEKVLKSAIANAEHNYEMDANNLVISQAFVDEGPTLKRFRPRAMGRASQINKRTSH
                     ITIVVSEKKEG"
     misc_feature    138503..138817
                     /gene="rplV"
                     /locus_tag="BSU01210"
                     /note="Ribosomal protein L22/L17e.  L22 (L17 in
                     eukaryotes) is a core protein of the large ribosomal
                     subunit.  It is the only ribosomal protein that interacts
                     with all six domains of 23S rRNA, and is one of the
                     proteins important for directing the proper...; Region:
                     Ribosomal_L22; cd00336"
                     /db_xref="CDD:238205"
     misc_feature    order(138503..138508,138572..138580,138584..138589,
                     138593..138598,138659..138676,138701..138718,
                     138812..138817)
                     /gene="rplV"
                     /locus_tag="BSU01210"
                     /note="putative translocon binding site; other site"
                     /db_xref="CDD:238205"
     misc_feature    order(138512..138514,138518..138520,138527..138529,
                     138533..138541,138548..138550,138560..138562,
                     138569..138571,138653..138655,138665..138667,
                     138674..138676,138713..138715,138719..138727,
                     138731..138733,138740..138742,138776..138793)
                     /gene="rplV"
                     /locus_tag="BSU01210"
                     /note="protein-rRNA interface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:238205"
     gene            138842..139498
                     /gene="rpsC"
                     /locus_tag="BSU01220"
                     /db_xref="GeneID:936808"
     CDS             138842..139498
                     /gene="rpsC"
                     /locus_tag="BSU01220"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="forms a complex with S10 and S14; binds the lower
                     part of the 30S subunit head and the mRNA in the complete
                     ribosome to position it for translation"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="NP_388003.2"
                     /db_xref="GI:255767030"
                     /db_xref="GeneID:936808"
                     /translation="MGQKVNPVGLRIGVIRDWESKWYAGKDYADFLHEDLKIREYISK
                     RLSDASVSKVEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINI
                     LEIKRADLDAQLVADNIARQLENRVSFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGAD
                     IARSEYYSEGTVPLHTLRADIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKNEEGGK
                     "
     misc_feature    138842..139495
                     /gene="rpsC"
                     /locus_tag="BSU01220"
                     /note="30S ribosomal protein S3; Reviewed; Region: rpsC;
                     PRK00310"
                     /db_xref="CDD:234722"
     misc_feature    138845..139162
                     /gene="rpsC"
                     /locus_tag="BSU01220"
                     /note="K homology RNA-binding (KH) domain of the
                     prokaryotic 30S small ribosomal subunit protein S3. S3  is
                     part of the head region of the 30S ribosomal subunit and
                     is believed to interact with mRNA as it threads its way
                     from the latch into the channel.  The KH...; Region:
                     30S_S3_KH; cd02412"
                     /db_xref="CDD:239095"
     misc_feature    139070..139081
                     /gene="rpsC"
                     /locus_tag="BSU01220"
                     /note="G-X-X-G motif; other site"
                     /db_xref="CDD:239095"
     misc_feature    139193..139444
                     /gene="rpsC"
                     /locus_tag="BSU01220"
                     /note="Ribosomal protein S3, C-terminal domain; Region:
                     Ribosomal_S3_C; pfam00189"
                     /db_xref="CDD:249666"
     gene            139500..139934
                     /gene="rplP"
                     /locus_tag="BSU01230"
                     /db_xref="GeneID:936807"
     CDS             139500..139934
                     /gene="rplP"
                     /locus_tag="BSU01230"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="located in the peptidyl transferase center and may
                     be involved in peptidyl transferase activity; similar to
                     archaeal L10e"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="NP_388004.1"
                     /db_xref="GI:16077191"
                     /db_xref="GeneID:936807"
                     /translation="MLLPKRVKYRREHRGKMRGRAKGGTEVHFGEFGIQALEASWITN
                     RQIEAARIAMTRYMKRGGKVWIKIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPGKV
                     LFEISGVSEEVAREALRLASHKLPIKTKFVKREEIGGESNES"
     misc_feature    139569..139895
                     /gene="rplP"
                     /locus_tag="BSU01230"
                     /note="Ribosomal_L16_L10e: L16 is an essential protein in
                     the large ribosomal subunit of bacteria, mitochondria, and
                     chloroplasts. Large subunits that lack L16 are defective
                     in peptidyl transferase activity, peptidyl-tRNA hydrolysis
                     activity, association with...; Region: Ribosomal_L16_L10e;
                     cd01433"
                     /db_xref="CDD:238714"
     misc_feature    order(139572..139577,139584..139586,139632..139637,
                     139644..139646,139653..139655,139665..139667,
                     139674..139676,139692..139700,139704..139706,
                     139710..139712,139722..139727,139746..139760,
                     139800..139802,139854..139859,139866..139871)
                     /gene="rplP"
                     /locus_tag="BSU01230"
                     /note="23S rRNA interface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:238714"
     misc_feature    139611..139616
                     /gene="rplP"
                     /locus_tag="BSU01230"
                     /note="5S rRNA interface [nucleotide binding]; other site"
                     /db_xref="CDD:238714"
     misc_feature    order(139647..139655,139662..139667)
                     /gene="rplP"
                     /locus_tag="BSU01230"
                     /note="putative antibiotic binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:238714"
     misc_feature    order(139674..139676,139683..139688,139692..139694,
                     139818..139820)
                     /gene="rplP"
                     /locus_tag="BSU01230"
                     /note="L25 interface [polypeptide binding]; other site"
                     /db_xref="CDD:238714"
     misc_feature    order(139740..139745,139752..139757)
                     /gene="rplP"
                     /locus_tag="BSU01230"
                     /note="L27 interface [polypeptide binding]; other site"
                     /db_xref="CDD:238714"
     gene            139924..140124
                     /gene="rpmC"
                     /locus_tag="BSU01240"
                     /db_xref="GeneID:936801"
     CDS             139924..140124
                     /gene="rpmC"
                     /locus_tag="BSU01240"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="one of the stabilizing components for the large
                     ribosomal subunit"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="NP_388005.1"
                     /db_xref="GI:16077192"
                     /db_xref="GeneID:936801"
                     /translation="MKANEIRDLTTAEIEQKVKSLKEELFNLRFQLATGQLENTARIR
                     EVRKAIARMKTVIREREIAANK"
     misc_feature    139933..140103
                     /gene="rpmC"
                     /locus_tag="BSU01240"
                     /note="Ribosomal L29 protein/HIP.  L29 is a protein of the
                     large ribosomal Subunit. A homolog, called heparin/heparan
                     sulfate interacting protein (HIP), has also been
                     identified in mammals.  L29 is located on the surface of
                     the large ribosomal subunit, where it...; Region:
                     Ribosomal_L29_HIP; cd00427"
                     /db_xref="CDD:238243"
     misc_feature    order(139933..139935,139942..139944,140044..140046,
                     140074..140079,140083..140088,140098..140100)
                     /gene="rpmC"
                     /locus_tag="BSU01240"
                     /note="23S rRNA interface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:238243"
     misc_feature    order(139933..139941,139945..139947,139957..139962,
                     139966..139971,139978..139983,139990..139995,
                     140002..140004,140011..140016,140038..140040,
                     140047..140049,140059..140061,140068..140073,
                     140080..140085,140092..140094)
                     /gene="rpmC"
                     /locus_tag="BSU01240"
                     /note="putative translocon interaction site; other site"
                     /db_xref="CDD:238243"
     misc_feature    order(139981..139983,139993..139995,140002..140004,
                     140014..140016,140059..140061)
                     /gene="rpmC"
                     /locus_tag="BSU01240"
                     /note="signal recognition particle (SRP54) interaction
                     site; other site"
                     /db_xref="CDD:238243"
     misc_feature    order(139999..140001,140008..140013)
                     /gene="rpmC"
                     /locus_tag="BSU01240"
                     /note="L23 interface [polypeptide binding]; other site"
                     /db_xref="CDD:238243"
     misc_feature    140020..140025
                     /gene="rpmC"
                     /locus_tag="BSU01240"
                     /note="trigger factor interaction site; other site"
                     /db_xref="CDD:238243"
     gene            140147..140410
                     /gene="rpsQ"
                     /locus_tag="BSU01250"
                     /db_xref="GeneID:936805"
     CDS             140147..140410
                     /gene="rpsQ"
                     /locus_tag="BSU01250"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="primary binding protein; helps mediate assembly;
                     involved in translation fidelity"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="NP_388006.1"
                     /db_xref="GI:16077193"
                     /db_xref="GeneID:936805"
                     /translation="MSERNQRKVYQGRVVSDKMDKTITVVVETYKKHTLYGKRVKYSK
                     KFKAHDENNQAKIGDIVKIMETRPLSATKRFRLVEVVEEAVII"
     misc_feature    140153..140401
                     /gene="rpsQ"
                     /locus_tag="BSU01250"
                     /note="30S ribosomal protein S17; Reviewed; Region: rpsQ;
                     PRK05610"
                     /db_xref="CDD:235532"
     gene            140451..140819
                     /gene="rplN"
                     /locus_tag="BSU01260"
                     /db_xref="GeneID:935939"
     CDS             140451..140819
                     /gene="rplN"
                     /locus_tag="BSU01260"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds to the 23S rRNA between the centers for
                     peptidyl transferase and GTPase"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="NP_388007.1"
                     /db_xref="GI:16077194"
                     /db_xref="GeneID:935939"
                     /translation="MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVK
                     QATPGGVVKKGEVVKAVIVRTKSGARRSDGSYISFDENACVIIRDDKSPRGTRIFGPV
                     ARELRENNFMKIVSLAPEVI"
     misc_feature    140451..140816
                     /gene="rplN"
                     /locus_tag="BSU01260"
                     /note="50S ribosomal protein L14; Validated; Region: rplN;
                     PRK05483"
                     /db_xref="CDD:180117"
     gene            140857..141168
                     /gene="rplX"
                     /locus_tag="BSU01270"
                     /db_xref="GeneID:936799"
     CDS             140857..141168
                     /gene="rplX"
                     /locus_tag="BSU01270"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="assembly initiator protein; binds to 5' end of 23S
                     rRNA and nucleates assembly of the 50S; surrounds
                     polypeptide exit tunnel"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="NP_388008.1"
                     /db_xref="GI:16077195"
                     /db_xref="GeneID:936799"
                     /translation="MHVKKGDKVMVISGKDKGKQGTILAAFPKKDRVLVEGVNMVKKH
                     SKPTQANPQGGISNQEAPIHVSNVMPLDPKTGEVTRVGYKVEDGKKVRVAKKSGQVLD
                     K"
     misc_feature    140872..141063
                     /gene="rplX"
                     /locus_tag="BSU01270"
                     /note="KOW motif of Ribosomal Protein L26; Region:
                     KOW_RPL26; cd06089"
                     /db_xref="CDD:240513"
     misc_feature    order(140893..140901,140935..140937,140980..140985,
                     141049..141054)
                     /gene="rplX"
                     /locus_tag="BSU01270"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:240513"
     gene            141195..141734
                     /gene="rplE"
                     /locus_tag="BSU01280"
                     /db_xref="GeneID:936981"
     CDS             141195..141734
                     /gene="rplE"
                     /locus_tag="BSU01280"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="part of 50S and 5S/L5/L18/L25 subcomplex; contacts
                     5S rRNA and P site tRNA; forms a bridge to the 30S subunit
                     in the ribosome by binding to S13"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="NP_388009.1"
                     /db_xref="GI:16077196"
                     /db_xref="GeneID:936981"
                     /translation="MNRLKEKYNKEIAPALMTKFNYDSVMQVPKIEKIVINMGVGDAV
                     QNAKAIDSAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDK
                     LISVSLPRVRDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVTKVRGMDIVIVTTA
                     NTDEEARELLTQVGMPFQK"
     misc_feature    141195..141731
                     /gene="rplE"
                     /locus_tag="BSU01280"
                     /note="50S ribosomal protein L5; Validated; Region: rplE;
                     PRK00010"
                     /db_xref="CDD:178791"
     misc_feature    141264..141434
                     /gene="rplE"
                     /locus_tag="BSU01280"
                     /note="Ribosomal protein L5; Region: Ribosomal_L5;
                     pfam00281"
                     /db_xref="CDD:109342"
     misc_feature    141444..141725
                     /gene="rplE"
                     /locus_tag="BSU01280"
                     /note="ribosomal L5P family C-terminus; Region:
                     Ribosomal_L5_C; pfam00673"
                     /db_xref="CDD:250045"
     gene            141757..141942
                     /gene="rpsN"
                     /locus_tag="BSU01290"
                     /db_xref="GeneID:935946"
     CDS             141757..141942
                     /gene="rpsN"
                     /locus_tag="BSU01290"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="located in the peptidyl transferase center and
                     involved in assembly of 30S ribosome subunit; similar to
                     what is observed with proteins L31 and L33, some proteins
                     in this family contain CXXC motifs that are involved in
                     zinc binding; if two copies are present in a genome, then
                     the duplicated copy appears to have lost the zinc-binding
                     motif and is instead regulated by zinc; the proteins in
                     this group appear to contain the zinc-binding motif"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="NP_388010.1"
                     /db_xref="GI:16077197"
                     /db_xref="GeneID:935946"
                     /translation="MAKKSMIAKQQRTPKFKVQEYTRCERCGRPHSVIRKFKLCRICF
                     RELAYKGQIPGVKKASW"
     misc_feature    141757..141939
                     /gene="rpsN"
                     /locus_tag="BSU01290"
                     /note="30S ribosomal protein S14; Reviewed; Region: rpsN;
                     PRK08061"
                     /db_xref="CDD:181216"
     gene            141974..142372
                     /gene="rpsH"
                     /locus_tag="BSU01300"
                     /db_xref="GeneID:936328"
     CDS             141974..142372
                     /gene="rpsH"
                     /locus_tag="BSU01300"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds directly to 16S rRNA central domain where it
                     helps coordinate assembly of the platform of the 30S
                     subunit"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="NP_388011.2"
                     /db_xref="GI:255767031"
                     /db_xref="GeneID:936328"
                     /translation="MVMTDPIADMLTRIRNANMVRHEKLEIPASKLKREIAEILKREG
                     FIRDVEFVEDSKQGIIRVFLKYGQNNERVITGLKRISKPGLRVYAKSNEVPRVLNGLG
                     IAIISTSQGVLTDKEARAKQAGGEVLAYVW"
     misc_feature    141977..142369
                     /gene="rpsH"
                     /locus_tag="BSU01300"
                     /note="30S ribosomal protein S8; Validated; Region: rpsH;
                     PRK00136"
                     /db_xref="CDD:234658"
     gene            142402..142941
                     /gene="rplF"
                     /locus_tag="BSU01310"
                     /db_xref="GeneID:938229"
     CDS             142402..142941
                     /gene="rplF"
                     /locus_tag="BSU01310"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="ribosomal protein L6 appears to have arisen as a
                     result of an ancient gene duplication as based on
                     structural comparison of the Bacillus stearothermophilus
                     protein; RNA-binding appears to be in the C-terminal
                     domain; mutations in the L6 gene confer resistance to
                     aminoglycoside antibiotics such as gentamicin and these
                     occur in truncations of the C-terminal domain; it has been
                     localized to a region between the base of the L7/L12 stalk
                     and the central protuberance"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="NP_388012.1"
                     /db_xref="GI:16077199"
                     /db_xref="GeneID:938229"
                     /translation="MSRVGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTFHPDMEI
                     KVEDNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRASKSGN
                     KLVLNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIRAVRSPEPYKG
                     KGIRYEGEVVRRKEGKSAK"
     misc_feature    142402..142938
                     /gene="rplF"
                     /locus_tag="BSU01310"
                     /note="50S ribosomal protein L6; Validated; Region: rplF;
                     PRK05498"
                     /db_xref="CDD:235495"
     misc_feature    142432..142650
                     /gene="rplF"
                     /locus_tag="BSU01310"
                     /note="Ribosomal protein L6; Region: Ribosomal_L6;
                     pfam00347"
                     /db_xref="CDD:249789"
     misc_feature    142672..142896
                     /gene="rplF"
                     /locus_tag="BSU01310"
                     /note="Ribosomal protein L6; Region: Ribosomal_L6;
                     pfam00347"
                     /db_xref="CDD:249789"
     gene            142974..143336
                     /gene="rplR"
                     /locus_tag="BSU01320"
                     /db_xref="GeneID:936785"
     CDS             142974..143336
                     /gene="rplR"
                     /locus_tag="BSU01320"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="binds 5S rRNA along with protein L5 and L25"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="NP_388013.2"
                     /db_xref="GI:255767032"
                     /db_xref="GeneID:936785"
                     /translation="MITKTSKNAARLKRHARVRAKLSGTAERPRLNVFRSNKHIYAQI
                     IDDVNGVTLASASTLDKDLNVESTGDTSAATKVGELVAKRAAEKGISDVVFDRGGYLY
                     HGRVKALADAAREAGLKF"
     misc_feature    143028..143327
                     /gene="rplR"
                     /locus_tag="BSU01320"
                     /note="Ribosomal L18/L5e:  L18 (L5e) is a ribosomal
                     protein found in the central protuberance (CP) of the
                     large subunit. L18 binds 5S rRNA and induces a
                     conformational change that stimulates the binding of L5 to
                     5S rRNA. Association of 5S rRNA with 23S rRNA...; Region:
                     Ribosomal_L18_L5e; cd00432"
                     /db_xref="CDD:238246"
     misc_feature    order(143031..143033,143037..143042,143046..143048,
                     143061..143063,143073..143090,143094..143096,
                     143100..143102,143121..143129,143136..143138,
                     143253..143255,143286..143288)
                     /gene="rplR"
                     /locus_tag="BSU01320"
                     /note="5S rRNA interface [nucleotide binding]; other site"
                     /db_xref="CDD:238246"
     misc_feature    order(143031..143033,143040..143045)
                     /gene="rplR"
                     /locus_tag="BSU01320"
                     /note="L27 interface [polypeptide binding]; other site"
                     /db_xref="CDD:238246"
     misc_feature    order(143034..143039,143256..143258,143265..143267,
                     143313..143315)
                     /gene="rplR"
                     /locus_tag="BSU01320"
                     /note="23S rRNA interface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:238246"
     misc_feature    143271..143273
                     /gene="rplR"
                     /locus_tag="BSU01320"
                     /note="L5 interface [polypeptide binding]; other site"
                     /db_xref="CDD:238246"
     gene            143361..143861
                     /gene="rpsE"
                     /locus_tag="BSU01330"
                     /db_xref="GeneID:938012"
     CDS             143361..143861
                     /gene="rpsE"
                     /locus_tag="BSU01330"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="located at the back of the 30S subunit body where
                     it stabilizes the conformation of the head with respect to
                     the body; contacts S4 and S8; with S4 and S12 plays a role
                     in translational accuracy; mutations in this gene result
                     in spectinomycin resistance"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="NP_388014.1"
                     /db_xref="GI:16077201"
                     /db_xref="GeneID:938012"
                     /translation="MRRIDPSKLELEERLVTVNRVAKVVKGGRRFRFAALVVVGDKNG
                     HVGFGTGKAQEVPEAIRKAVEDAKKNLIEVPMVGTTIPHEIIGRFGAGNILLKPASEG
                     TGVIAGGPVRAVLELAGVADILSKSLGSNTPINMIRATLQGLSELKRAEDVAKLRGKS
                     VEELLG"
     misc_feature    143361..143858
                     /gene="rpsE"
                     /locus_tag="BSU01330"
                     /note="30S ribosomal protein S5; Validated; Region: rpsE;
                     PRK00550"
                     /db_xref="CDD:234790"
     misc_feature    143388..143585
                     /gene="rpsE"
                     /locus_tag="BSU01330"
                     /note="Ribosomal protein S5, N-terminal domain; Region:
                     Ribosomal_S5; pfam00333"
                     /db_xref="CDD:144065"
     misc_feature    143613..143834
                     /gene="rpsE"
                     /locus_tag="BSU01330"
                     /note="Ribosomal protein S5, C-terminal domain; Region:
                     Ribosomal_S5_C; pfam03719"
                     /db_xref="CDD:252121"
     gene            143875..144054
                     /gene="rpmD"
                     /locus_tag="BSU01340"
                     /db_xref="GeneID:936920"
     CDS             143875..144054
                     /gene="rpmD"
                     /locus_tag="BSU01340"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="L30 binds domain II of the 23S rRNA and the 5S
                     rRNA; similar to eukaryotic protein L7"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="NP_388015.1"
                     /db_xref="GI:16077202"
                     /db_xref="GeneID:936920"
                     /translation="MAKLEITLKRSVIGRPEDQRVTVRTLGLKKTNQTVVHEDNAAIR
                     GMINKVSHLVSVKEQ"
     misc_feature    143884..144042
                     /gene="rpmD"
                     /locus_tag="BSU01340"
                     /note="Ribosomal protein L30, which is found in eukaryotes
                     and prokaryotes but not in archaea, is one of the smallest
                     ribosomal proteins with a molecular mass of about 7kDa.
                     L30 binds the 23SrRNA as well as the 5S rRNA and is one of
                     five ribosomal proteins that...; Region: Ribosomal_L30;
                     cd01658"
                     /db_xref="CDD:100100"
     misc_feature    order(143902..143907,143911..143916,143920..143928,
                     143935..143940,143947..143955,143959..143961,
                     143968..143970,143983..143988,143995..144003,
                     144007..144012)
                     /gene="rpmD"
                     /locus_tag="BSU01340"
                     /note="23S rRNA binding site [nucleotide binding]; other
                     site"
                     /db_xref="CDD:100100"
     gene            144085..144525
                     /gene="rplO"
                     /locus_tag="BSU01350"
                     /db_xref="GeneID:935940"
     CDS             144085..144525
                     /gene="rplO"
                     /locus_tag="BSU01350"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="late assembly protein"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="NP_388016.1"
                     /db_xref="GI:16077203"
                     /db_xref="GeneID:935940"
                     /translation="MKLHELKPSEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGG
                     GVRPGFEGGQMPLFQRLPKRGFTNINRKEYAVVNLDKLNGFAEGTEVTPELLLETGVI
                     SKLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI"
     misc_feature    144085..144522
                     /gene="rplO"
                     /locus_tag="BSU01350"
                     /note="50S ribosomal protein L15; Reviewed; Region: rplO;
                     PRK05592"
                     /db_xref="CDD:235523"
     gene            144527..145822
                     /gene="secY"
                     /locus_tag="BSU01360"
                     /db_xref="GeneID:936779"
     CDS             144527..145822
                     /gene="secY"
                     /locus_tag="BSU01360"
                     /function="16.1: Circulate"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="forms heterotrimeric complex in the membrane; in
                     bacteria the complex consists of SecY which forms the
                     channel pore and SecE and SecG; the SecG subunit is not
                     essential; in bacteria translocation is driven via the
                     SecA ATPase"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecY"
                     /protein_id="NP_388017.1"
                     /db_xref="GI:16077204"
                     /db_xref="GeneID:936779"
                     /translation="MFKTISNFMRVSDIRNKIIFTLLMLIVFRIGAFIPVPYVNAEAL
                     QAQSQMGVFDLLNTFGGGALYQFSIFAMGITPYITASIIIQLLQMDVVPKFTEWSKQG
                     EVGRRKLAQFTRYFTIVLGFIQALGMSYGFNNLANGMLIEKSGVSTYLIIALVLTGGT
                     AFLMWLGEQITSHGVGNGISIIIFAGIVSSIPKTIGQIYETQFVGSNDQLFIHIVKVA
                     LLVIAILAVIVGVIFIQQAVRKIAIQYAKGTGRSPAGGGQSTHLPLKVNPAGVIPVIF
                     AVAFLITPRTIASFFGTNDVTKWIQNNFDNTHPVGMAIYVALIIAFTYFYAFVQVNPE
                     QMADNLKKQGGYIPGVRPGKMTQDRITSILYRLTFVGSIFLAVISILPIFFIQFAGLP
                     QSAQIGGTSLLIVVGVALETMKQLESQLVKRNYRGFMKN"
     misc_feature    144527..145813
                     /gene="secY"
                     /locus_tag="BSU01360"
                     /note="preprotein translocase subunit SecY; Reviewed;
                     Region: secY; PRK09204"
                     /db_xref="CDD:236412"
     misc_feature    144728..145768
                     /gene="secY"
                     /locus_tag="BSU01360"
                     /note="SecY translocase; Region: SecY; pfam00344"
                     /db_xref="CDD:249786"
     gene            145877..146530
                     /gene="adk"
                     /locus_tag="BSU01370"
                     /db_xref="GeneID:938508"
     CDS             145877..146530
                     /gene="adk"
                     /locus_tag="BSU01370"
                     /EC_number="2.7.4.3"
                     /function="16.7: Manage energy"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="essential enzyme that recycles AMP in active cells;
                     converts ATP and AMP to two molecules of ADP"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="NP_388018.1"
                     /db_xref="GI:16077205"
                     /db_xref="GeneID:938508"
                     /translation="MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETP
                     LGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEE
                     YGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQR
                     ADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK"
     misc_feature    145877..146521
                     /gene="adk"
                     /locus_tag="BSU01370"
                     /note="adenylate kinase; Reviewed; Region: adk; PRK00279"
                     /db_xref="CDD:234711"
     misc_feature    145880..146488
                     /gene="adk"
                     /locus_tag="BSU01370"
                     /note="Adenylate kinase (ADK) catalyzes the reversible
                     phosphoryl transfer from adenosine triphosphates (ATP) to
                     adenosine monophosphates (AMP) and to yield adenosine
                     diphosphates (ADP). This enzyme is required for the
                     biosynthesis of ADP and is essential for...; Region: ADK;
                     cd01428"
                     /db_xref="CDD:238713"
     misc_feature    order(145967..145969,145982..145984,146051..146053,
                     146126..146131,146135..146140,146150..146152)
                     /gene="adk"
                     /locus_tag="BSU01370"
                     /note="AMP-binding site [chemical binding]; other site"
                     /db_xref="CDD:238713"
     misc_feature    order(145982..145984,146126..146128,146138..146140,
                     146255..146257,146387..146389,146399..146401)
                     /gene="adk"
                     /locus_tag="BSU01370"
                     /note="ATP-AMP (Ap5A)-binding site [chemical binding];
                     other site"
                     /db_xref="CDD:238713"
     gene            146527..147273
                     /gene="mapA"
                     /locus_tag="BSU01380"
                     /db_xref="GeneID:938929"
     CDS             146527..147273
                     /gene="mapA"
                     /locus_tag="BSU01380"
                     /EC_number="3.4.11.18"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the removal of N-terminal amino acids
                     from peptides and arylamides; generally Co(II) however
                     activity has been shown for some methionine
                     aminopeptidases with Zn, Fe, or Mn"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine aminopeptidase 1"
                     /protein_id="NP_388019.1"
                     /db_xref="GI:16077206"
                     /db_xref="GeneID:938929"
                     /translation="MIICKTPRELGIMREAGRIVALTHEELKKHIKPGISTKELDQIA
                     ERFIKKQGAIPSFKGYNGFRGSICVSVNEELVHGIPGSRVLKDGDIISIDIGAKLNGY
                     HGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSNISHAIQTYVENEQFS
                     VVREYVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSRYVKTLADNW
                     TVVTVDGKKCAHFEHTIAITETGFDILTRV"
     misc_feature    146560..147267
                     /gene="mapA"
                     /locus_tag="BSU01380"
                     /note="Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also
                     known as methionyl aminopeptidase and Peptidase M.
                     Catalyzes release of N-terminal amino acids,
                     preferentially methionine, from peptides and arylamides;
                     Region: MetAP1; cd01086"
                     /db_xref="CDD:238519"
     misc_feature    order(146755..146757,146806..146808,146839..146841,
                     147028..147030,147127..147129,147220..147222)
                     /gene="mapA"
                     /locus_tag="BSU01380"
                     /note="active site"
                     /db_xref="CDD:238519"
     gene            147312..147536
                     /gene="ybzG"
                     /locus_tag="BSU01389"
                     /db_xref="GeneID:8303095"
     CDS             147312..147536
                     /gene="ybzG"
                     /locus_tag="BSU01389"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 17157877; Product type pf :  factor"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-binding protein YbzG"
                     /protein_id="YP_003097669.1"
                     /db_xref="GI:255767033"
                     /db_xref="GeneID:8303095"
                     /translation="MIGQKAWVNIGKTEFILLLVVGILTIINVLTADGEKRTFHSPKK
                     KNINHLTLYDCVSPEVQNSINETGRVTNFF"
     misc_feature    147315..147527
                     /gene="ybzG"
                     /locus_tag="BSU01389"
                     /note="KOW: an acronym for the authors' surnames
                     (Kyrpides, Ouzounis and Woese); Region: KOW; cl00354"
                     /db_xref="CDD:260377"
     gene            147585..147803
                     /gene="infA"
                     /locus_tag="BSU01390"
                     /db_xref="GeneID:938924"
     CDS             147585..147803
                     /gene="infA"
                     /locus_tag="BSU01390"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="stimulates the activities of the other two
                     initiation factors, IF-2 and IF-3"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="NP_388020.1"
                     /db_xref="GI:16077207"
                     /db_xref="GeneID:938924"
                     /translation="MAKDDVIEVEGTIVETLPNAMFKVELENGHTVLAHVSGKIRMHF
                     IRILPGDKVTVELSPYDLTRGRITYRYK"
     misc_feature    147603..147794
                     /gene="infA"
                     /locus_tag="BSU01390"
                     /note="S1_IF1: Translation Initiation Factor IF1, S1-like
                     RNA-binding domain. IF1 contains an S1-like RNA-binding
                     domain, which is found in a wide variety of RNA-associated
                     proteins. Translation initiation includes a number of
                     interrelated steps preceding the...; Region: S1_IF1;
                     cd04451"
                     /db_xref="CDD:239898"
     misc_feature    order(147627..147635,147651..147653,147687..147689,
                     147696..147701,147714..147725,147774..147776,
                     147780..147782)
                     /gene="infA"
                     /locus_tag="BSU01390"
                     /note="rRNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:239898"
     misc_feature    order(147687..147689,147699..147701,147792..147794)
                     /gene="infA"
                     /locus_tag="BSU01390"
                     /note="predicted 30S ribosome binding site; other site"
                     /db_xref="CDD:239898"
     gene            147837..147950
                     /gene="rpmJ"
                     /locus_tag="BSU01400"
                     /db_xref="GeneID:938927"
     CDS             147837..147950
                     /gene="rpmJ"
                     /locus_tag="BSU01400"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="smallest protein in the large subunit; similar to
                     what is found with protein L31 and L33 several bacterial
                     genomes contain paralogs which may be regulated by zinc;
                     the protein from Thermus thermophilus has a zinc-binding
                     motif and contains a bound zinc ion; the proteins in this
                     group have the motif"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="NP_388021.1"
                     /db_xref="GI:16077208"
                     /db_xref="GeneID:938927"
                     /translation="MKVRPSVKPICEKCKVIRRKGKVMVICENPKHKQKQG"
     misc_feature    147837..147947
                     /gene="rpmJ"
                     /locus_tag="BSU01400"
                     /note="50S ribosomal protein L36; Reviewed; Region: rpmJ;
                     PRK00465"
                     /db_xref="CDD:179039"
     gene            147973..148338
                     /gene="rpsM"
                     /locus_tag="BSU01410"
                     /db_xref="GeneID:938928"
     CDS             147973..148338
                     /gene="rpsM"
                     /locus_tag="BSU01410"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="located at the top of the head of the 30S subunit,
                     it contacts several helices of the 16S rRNA; makes contact
                     with the large subunit via RNA-protein interactions and
                     via protein-protein interactions with L5; contacts P-site
                     tRNA"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="NP_388022.2"
                     /db_xref="GI:255767034"
                     /db_xref="GeneID:938928"
                     /translation="MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTR
                     VRDLTEEELGKIRDIIDKLKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNS
                     KNNARTRKGPRRTVANKKK"
     misc_feature    147973..148335
                     /gene="rpsM"
                     /locus_tag="BSU01410"
                     /note="30S ribosomal protein S13; Validated; Region: rpsM;
                     PRK05179"
                     /db_xref="CDD:235358"
     gene            148359..148754
                     /gene="rpsK"
                     /locus_tag="BSU01420"
                     /db_xref="GeneID:938926"
     CDS             148359..148754
                     /gene="rpsK"
                     /locus_tag="BSU01420"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="located on the platform of the 30S subunit, it
                     bridges several disparate RNA helices of the 16S rRNA;
                     forms part of the Shine-Dalgarno cleft in the 70S
                     ribosome; interacts with S7 and S18 and IF-3"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="NP_388023.1"
                     /db_xref="GI:16077210"
                     /db_xref="GeneID:938926"
                     /translation="MAAARKSNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTHGNAI
                     SWSSAGALGFRGSRKSTPFAAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRAL
                     QAAGLEVTAIRDVTPVPHNGCRPPKRRRV"
     misc_feature    148368..148751
                     /gene="rpsK"
                     /locus_tag="BSU01420"
                     /note="30S ribosomal protein S11; Validated; Region:
                     PRK05309"
                     /db_xref="CDD:180007"
     gene            148931..149875
                     /gene="rpoA"
                     /locus_tag="BSU01430"
                     /db_xref="GeneID:938921"
     CDS             148931..149875
                     /gene="rpoA"
                     /locus_tag="BSU01430"
                     /EC_number="2.7.7.6"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the transcription of DNA into RNA using
                     the four ribonucleoside triphosphates as substrates.
                     Dimerization of the alpha subunit is the first step in the
                     sequential assembly of subunits to form the holoenzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="NP_388024.1"
                     /db_xref="GI:16077211"
                     /db_xref="GeneID:938921"
                     /translation="MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRIL
                     LSSLPGAAVTSIQIDGVLHEFSTIEGVVEDVTTIILHIKKLALKIYSDEEKTLEIDVQ
                     GEGTVTAADITHDSDVEILNPDLHIATLGENASFRVRLTAQRGRGYTPADANKRDDQP
                     IGVIPIDSIYTPVSRVSYQVENTRVGQVANYDKLTLDVWTDGSTGPKEAIALGSKILT
                     EHLNIFVGLTDEAQHAEIMVEKEEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQE
                     LANKTEEDMMKVRNLGRKSLEEVKAKLEELGLGLRKDD"
     misc_feature    148934..149866
                     /gene="rpoA"
                     /locus_tag="BSU01430"
                     /note="DNA-directed RNA polymerase subunit alpha;
                     Provisional; Region: PRK05182"
                     /db_xref="CDD:235359"
     misc_feature    148967..149602
                     /gene="rpoA"
                     /locus_tag="BSU01430"
                     /note="N-terminal domain of the Alpha subunit of Bacterial
                     RNA polymerase; Region: RNAP_alpha_NTD; cd06928"
                     /db_xref="CDD:132904"
     misc_feature    order(148967..148969,149003..149005,149012..149014,
                     149018..149026,149033..149035,149045..149047,
                     149054..149059,149069..149071,149570..149572,
                     149579..149584,149588..149593,149597..149602)
                     /gene="rpoA"
                     /locus_tag="BSU01430"
                     /note="alphaNTD homodimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:132904"
     misc_feature    order(148994..148996,149030..149032,149042..149044,
                     149051..149056,149117..149119,149123..149125,
                     149129..149131,149135..149146,149159..149161,
                     149177..149179,149321..149323,149372..149374,
                     149429..149431,149435..149437,149453..149461,
                     149465..149476,149504..149506,149513..149515,
                     149519..149521)
                     /gene="rpoA"
                     /locus_tag="BSU01430"
                     /note="alphaNTD - beta interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:132904"
     misc_feature    order(149123..149125,149159..149161,149168..149170,
                     149177..149182,149369..149374,149378..149380,
                     149435..149437,149450..149455,149480..149482)
                     /gene="rpoA"
                     /locus_tag="BSU01430"
                     /note="alphaNTD - beta' interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:132904"
     misc_feature    149669..149845
                     /gene="rpoA"
                     /locus_tag="BSU01430"
                     /note="Bacterial RNA polymerase, alpha chain C terminal
                     domain; Region: RNA_pol_A_CTD; pfam03118"
                     /db_xref="CDD:251738"
     gene            149953..150315
                     /gene="rplQ"
                     /locus_tag="BSU01440"
                     /db_xref="GeneID:938918"
     CDS             149953..150315
                     /gene="rplQ"
                     /locus_tag="BSU01440"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="is a component of the macrolide binding site in the
                     peptidyl transferase center"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="NP_388025.1"
                     /db_xref="GI:16077212"
                     /db_xref="GeneID:938918"
                     /translation="MSYRKLGRTSAQRKAMLRDLTTDLIINERIETTETRAKELRSVV
                     EKMITLGKRGDLHARRQAAAYIRNEVANEENNQDALQKLFSDIATRYEERQGGYTRIM
                     KLGPRRGDGAPMAIIELV"
     misc_feature    149953..150312
                     /gene="rplQ"
                     /locus_tag="BSU01440"
                     /note="50S ribosomal protein L17; Validated; Region: rplQ;
                     PRK05591"
                     /db_xref="CDD:235522"
     gene            150443..151288
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /db_xref="GeneID:938925"
     CDS             150443..151288
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="with CbiNQ forms the ABC transporter for cobalt
                     import; Bacillus spp. have two adjacent copies of this
                     gene"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATP-binding
                     protein EcfA1"
                     /protein_id="NP_388026.2"
                     /db_xref="GI:255767035"
                     /db_xref="GeneID:938925"
                     /translation="MNQNQLISVEDIVFRYRKDAERRALDGVSLQVYEGEWLAIVGHN
                     GSGKSTLARALNGLILPESGDIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFVGTTVR
                     DDVAFGLENNGVPREEMIERVDWAVKQVNMQDFLDQEPHHLSGGQKQRVAIAGVIAAR
                     PDIIILDEATSMLDPIGREEVLETVRHLKEQGMATVISITHDLNEAAKADRIIVMNGG
                     KKYAEGPPEEIFKLNKELVRIGLDLPFSFQLSQLLRENGLALEENHLTQEGLVKELWT
                     LQSKM"
     misc_feature    150446..151285
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /note="cobalt transporter ATP-binding subunit;
                     Provisional; Region: cbiO; PRK13635"
                     /db_xref="CDD:184195"
     misc_feature    150464..151099
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /note="First domain of the ATP-binding cassette component
                     of cobalt transport system; Region:
                     ABC_cobalt_CbiO_domain1; cd03225"
                     /db_xref="CDD:213192"
     misc_feature    150566..150589
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /note="Walker A/P-loop; other site"
                     /db_xref="CDD:213192"
     misc_feature    order(150575..150580,150584..150592,150710..150712,
                     150941..150946,151043..151045)
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:213192"
     misc_feature    150701..150712
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /note="Q-loop/lid; other site"
                     /db_xref="CDD:213192"
     misc_feature    150869..150898
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /note="ABC transporter signature motif; other site"
                     /db_xref="CDD:213192"
     misc_feature    150929..150946
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /note="Walker B; other site"
                     /db_xref="CDD:213192"
     misc_feature    150953..150964
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /note="D-loop; other site"
                     /db_xref="CDD:213192"
     misc_feature    151031..151051
                     /gene="cbiO"
                     /locus_tag="BSU01450"
                     /note="H-loop/switch region; other site"
                     /db_xref="CDD:213192"
     gene            151303..152133
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /db_xref="GeneID:938922"
     CDS             151303..152133
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="with CbiNQ forms the ABC transporter for cobalt
                     import; Bacillus spp. have two adjacent copies of this
                     gene"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATP-binding
                     protein EcfA2"
                     /protein_id="NP_388027.1"
                     /db_xref="GI:16077214"
                     /db_xref="GeneID:938922"
                     /translation="MKTPFERLALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLL
                     KPTKGQISLGSTVIQAGKKNKDLKKLRKKVGIVFQFPEHQLFEETVLKDISFGPMNFG
                     VKKEDAEQKAREMLQLVGLSEELLDRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPT
                     AGLDPRGRKEIMDMFYELHQRGNLTTILVTHSMEDAAAYADEMIVMHKGTIQASGSPR
                     DLFLKGEEMAGWGLDLPETIKFQRHLEAALGVRFNEPMLTIEDAAAEIRALFQGEKTL
                     "
     misc_feature    151303..152130
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /note="cobalt transporter ATP-binding subunit;
                     Provisional; Region: cbiO; PRK13634"
                     /db_xref="CDD:237454"
     misc_feature    151318..151932
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /note="First domain of the ATP-binding cassette component
                     of cobalt transport system; Region:
                     ABC_cobalt_CbiO_domain1; cd03225"
                     /db_xref="CDD:213192"
     misc_feature    151381..151404
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /note="Walker A/P-loop; other site"
                     /db_xref="CDD:213192"
     misc_feature    order(151390..151395,151399..151407,151537..151539,
                     151771..151776,151873..151875)
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:213192"
     misc_feature    151528..151539
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /note="Q-loop/lid; other site"
                     /db_xref="CDD:213192"
     misc_feature    151699..151728
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /note="ABC transporter signature motif; other site"
                     /db_xref="CDD:213192"
     misc_feature    151759..151776
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /note="Walker B; other site"
                     /db_xref="CDD:213192"
     misc_feature    151783..151794
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /note="D-loop; other site"
                     /db_xref="CDD:213192"
     misc_feature    151861..151881
                     /gene="cbiO"
                     /locus_tag="BSU01460"
                     /note="H-loop/switch region; other site"
                     /db_xref="CDD:213192"
     gene            152130..152927
                     /gene="ybaF"
                     /locus_tag="BSU01470"
                     /db_xref="GeneID:938923"
     CDS             152130..152927
                     /gene="ybaF"
                     /locus_tag="BSU01470"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="NP_388028.2"
                     /db_xref="GI:255767036"
                     /db_xref="GeneID:938923"
                     /translation="MMDSMIIGKYVPGTSLVHRLDPRTKLITIFLFVCIVFLANNVQT
                     YALLGLFTIGVVSLTRVPFSFLMKGLKPIIWIVLFTFLLHILMTHEGPIIFQIGFFKV
                     YEGGLVQGIFISLRFVYLILITTLLTLTTTPIEITDGMEQLLNPLKKLKLPVHELALM
                     MSISLRFIPTLMEETDKIMKAQMARGVDFTSGPVKERVKAIVPLLVPLFVSAFKRAEE
                     LAVAMEARGYQGGEGRTKYRKLVWTGKDTSVIVSLIVLAALLFFLRA"
     misc_feature    152142..152921
                     /gene="ybaF"
                     /locus_tag="BSU01470"
                     /note="ABC-type cobalt transport system, permease
                     component CbiQ and related transporters [Inorganic ion
                     transport and metabolism]; Region: CbiQ; COG0619"
                     /db_xref="CDD:223692"
     gene            152937..153680
                     /gene="truA"
                     /locus_tag="BSU01480"
                     /db_xref="GeneID:938920"
     CDS             152937..153680
                     /gene="truA"
                     /locus_tag="BSU01480"
                     /EC_number="5.4.99.12"
                     /function="16.6: Maintain"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="mediates pseudouridylation (positions 38, 39, 40)
                     at the tRNA anticodon region which contributes to the
                     structural stability"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine synthase A"
                     /protein_id="NP_388029.2"
                     /db_xref="GI:255767037"
                     /db_xref="GeneID:938920"
                     /translation="MRLKCTISYDGHLFNGYQVQPGKRTVQDELEKALAVLHKSKDRI
                     PVVSSGRTDSGVHAAGQVIHFDTPLSIPAERWPYALNALLPDDIAVKQAEIADDGFHA
                     RFSAVKKEYRYFVYTEKHPDVFKRHYAYHFSYRLNVQDMREAAKHLIGTHDFTSFCAA
                     KTEVQDKVRTIYELDWTETADGLQMRITGSGFLYNMVRIIAGTLLDAGIGKISPDEVK
                     SMLEAKDREAAGRTAPGHGLYLWNVYYDN"
     misc_feature    152937..153671
                     /gene="truA"
                     /locus_tag="BSU01480"
                     /note="tRNA pseudouridine synthase A; Validated; Region:
                     truA; PRK00021"
                     /db_xref="CDD:234577"
     misc_feature    152949..153671
                     /gene="truA"
                     /locus_tag="BSU01480"
                     /note="Eukaryotic and bacterial pseudouridine synthases
                     similar to E.  coli TruA; Region: PseudoU_synth_EcTruA;
                     cd02570"
                     /db_xref="CDD:211337"
     misc_feature    order(152958..152960,153177..153179,153186..153209)
                     /gene="truA"
                     /locus_tag="BSU01480"
                     /note="dimerization interface 3.5A [polypeptide binding];
                     other site"
                     /db_xref="CDD:211337"
     misc_feature    order(153084..153095,153528..153530)
                     /gene="truA"
                     /locus_tag="BSU01480"
                     /note="active site"
                     /db_xref="CDD:211337"
     gene            153737..153793
                     /locus_tag="BSU_misc_RNA_4"
                     /db_xref="GeneID:8303111"
     misc_RNA        153737..153793
                     /locus_tag="BSU_misc_RNA_4"
                     /product="L13_leader"
                     /inference="profile:Rfam:8.1"
                     /db_xref="GeneID:8303111"
     gene            153842..154279
                     /gene="rplM"
                     /locus_tag="BSU01490"
                     /db_xref="GeneID:938915"
     CDS             153842..154279
                     /gene="rplM"
                     /locus_tag="BSU01490"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="in Escherichia coli this protein is one of the
                     earliest assembly proteins in the large subunit"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="NP_388030.2"
                     /db_xref="GI:255767038"
                     /db_xref="GeneID:938915"
                     /translation="MRTTPMANASTIERKWLVVDAAGKTLGRLSSEVAAILRGKHKPT
                     YTPHVDTGDHVIIINAEKIELTGKKLTDKIYYRHTQHPGGLKSRTALEMRTNYPEKML
                     ELAIKGMLPKGSLGRQMFKKLNVYRGSEHPHEAQKPEVYELRG"
     misc_feature    153887..154228
                     /gene="rplM"
                     /locus_tag="BSU01490"
                     /note="Ribosomal protein L13.  Protein L13, a large
                     ribosomal subunit protein, is one of five proteins
                     required for an early folding intermediate of 23S rRNA in
                     the assembly of the large subunit. L13 is situated on the
                     bottom of the large subunit, near the...; Region:
                     Ribosomal_L13; cd00392"
                     /db_xref="CDD:238230"
     misc_feature    order(153914..153916,153920..153925,153932..153934,
                     153941..153943,153953..153955,154037..154039,
                     154043..154045,154127..154132,154148..154156,
                     154160..154168,154172..154180,154184..154186,
                     154190..154192,154202..154204,154211..154216)
                     /gene="rplM"
                     /locus_tag="BSU01490"
                     /note="23S rRNA interface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:238230"
     misc_feature    154130..154132
                     /gene="rplM"
                     /locus_tag="BSU01490"
                     /note="L3 interface [polypeptide binding]; other site"
                     /db_xref="CDD:238230"
     gene            154300..154692
                     /gene="rpsI"
                     /locus_tag="BSU01500"
                     /db_xref="GeneID:938912"
     CDS             154300..154692
                     /gene="rpsI"
                     /locus_tag="BSU01500"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="forms a direct contact with the tRNA during
                     translation"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="NP_388031.1"
                     /db_xref="GI:16077218"
                     /db_xref="GeneID:938912"
                     /translation="MAQVQYYGTGRRKSSVARVRLVPGEGRIVVNNREISEHIPSAAL
                     IEDIKQPLTLTETAGTYDVLVNVHGGGLSGQAGAIRHGIARALLEADPEYRTTLKRAG
                     LLTRDARMKERKKYGLKGARRAPQFSKR"
     misc_feature    154300..154689
                     /gene="rpsI"
                     /locus_tag="BSU01500"
                     /note="30S ribosomal protein S9; Reviewed; Region: rpsI;
                     PRK00132"
                     /db_xref="CDD:178888"
     gene            155156..155923
                     /gene="ybaJ"
                     /locus_tag="BSU01510"
                     /db_xref="GeneID:938919"
     CDS             155156..155923
                     /gene="ybaJ"
                     /locus_tag="BSU01510"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="NP_388032.2"
                     /db_xref="GI:255767039"
                     /db_xref="GeneID:938919"
                     /translation="MNALVAHNSKAWDKKVETGNEWTVAVEQQVIEQAKKGNWDIRVT
                     PMKDVPKDWFPPIKGLKVLCLASGGGQQGPVLAAAGADVTVLDNSEKQLNQDRMIAER
                     DGLTIHTVKGSMDDLSVFNDESFDVIVHPVANVFVENVLPVWKEAYRVLKRNGILISG
                     FVNPVVFLFDTELEQQGVLKVKHSIPYADPEDLPKHKVKKLIENNEALEFGHSLEDQI
                     KGQIDAGFIVTGFYEDKGGFVLDQYIHTYSATRSVKV"
     misc_feature    155336..155641
                     /gene="ybaJ"
                     /locus_tag="BSU01510"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cd02440"
                     /db_xref="CDD:100107"
     misc_feature    order(155348..155368,155414..155419,155489..155497)
                     /gene="ybaJ"
                     /locus_tag="BSU01510"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     gene            156109..156552
                     /gene="ybaK"
                     /locus_tag="BSU01520"
                     /db_xref="GeneID:938916"
     CDS             156109..156552
                     /gene="ybaK"
                     /locus_tag="BSU01520"
                     /function="16.8: Protect"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 14679227, 16267290; Product type pe:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388033.1"
                     /db_xref="GI:16077220"
                     /db_xref="GeneID:938916"
                     /translation="MAEVLSFMDVKRQKDFELEKNLLKELSLRQIIQSVKDCLEPLFP
                     FLHDERDIITEGCIDFAIEAYLLGGRFGIFGYYGESMQSISARSAREEEELRMEFFDY
                     LYNWIHEQYATFDKNTVYEAARKFIKDWWTAGFVQREKQCKLRMR"
     misc_feature    156109..156549
                     /gene="ybaK"
                     /locus_tag="BSU01520"
                     /note="Protein of unknown function (DUF2521); Region:
                     DUF2521; pfam10730"
                     /db_xref="CDD:256144"
     gene            156612..157325
                     /gene="cwlD"
                     /locus_tag="BSU01530"
                     /db_xref="GeneID:938917"
     CDS             156612..157325
                     /gene="cwlD"
                     /locus_tag="BSU01530"
                     /EC_number="3.5.1.28"
                     /function="16.8: Protect"
                     /function="16.6: Maintain"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 14679227, 16267290;
                     Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="germination-specific N-acetylmuramoyl-L-alanine
                     amidase"
                     /protein_id="NP_388034.1"
                     /db_xref="GI:16077221"
                     /db_xref="GeneID:938917"
                     /translation="MRKKLKWLSFLLGFIILLFLFKYQFSNNDSWKPWSLPLSGKIIY
                     LDPGHGGPDGGAVGGKLLEKDVTLEVAFRVRDYLQEQGALVIMTRESDTDLAPEGTKG
                     YSRRKAEDLRQRVKLINHSEAELYISIHLNAIPSQKWSGAQSFYYGKYAENEKVAKYI
                     QDELRRNLENTTRKAKRIHGIYLMQNVTKPGALIEVGFLSNPSEATLLGKPKYQDKVA
                     SSIYKGILRYFTEKGDPPE"
     misc_feature    156789..157289
                     /gene="cwlD"
                     /locus_tag="BSU01530"
                     /note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA
                     (also known as peptidoglycan aminohydrolase, NAMLA
                     amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC
                     3.5.1.28) is an autolysin that hydrolyzes the amide bond
                     between N-acetylmuramoyl and L-amino...; Region:
                     MurNAc-LAA; cd02696"
                     /db_xref="CDD:119407"
     misc_feature    <156792..157301
                     /gene="cwlD"
                     /locus_tag="BSU01530"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell envelope
                     biogenesis, outer membrane]; Region: AmiC; COG0860"
                     /db_xref="CDD:223929"
     misc_feature    order(156798..156800,156999..157001,157194..157196)
                     /gene="cwlD"
                     /locus_tag="BSU01530"
                     /note="active site"
                     /db_xref="CDD:119407"
     misc_feature    order(156798..156800,156999..157001)
                     /gene="cwlD"
                     /locus_tag="BSU01530"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:119407"
     gene            157421..158479
                     /gene="salA"
                     /locus_tag="BSU01540"
                     /db_xref="GeneID:938914"
     CDS             157421..158479
                     /gene="salA"
                     /locus_tag="BSU01540"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11790741, 15126467;
                     Product type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="protein mrp homolog SalA"
                     /protein_id="NP_388035.1"
                     /db_xref="GI:16077222"
                     /db_xref="GeneID:938914"
                     /translation="MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVK
                     VALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNM
                     DNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGITVRP
                     TIEGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVL
                     DLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMA
                     YYESAKTGEREYVFGKGGGDKLAEELNVPLLGRIPLKQPDWDKDQFAPSVYDENHPIG
                     EIYQDIAKKIDAKMSVQV"
     misc_feature    157547..158365
                     /gene="salA"
                     /locus_tag="BSU01540"
                     /note="ATPases involved in chromosome partitioning [Cell
                     division and chromosome partitioning]; Region: Mrp;
                     COG0489"
                     /db_xref="CDD:223563"
     misc_feature    157745..158362
                     /gene="salA"
                     /locus_tag="BSU01540"
                     /note="MRP (Multiple Resistance and pH adaptation) is a
                     homologue of the Fer4_NifH superfamily. Like the other
                     members of the superfamily, MRP contains a ATP-binding
                     domain at the N-termini. It is found in bacteria as a
                     membrane-spanning protein and functions...; Region:
                     MRP-like; cd02037"
                     /db_xref="CDD:238994"
     misc_feature    157760..157783
                     /gene="salA"
                     /locus_tag="BSU01540"
                     /note="Walker A motif; other site"
                     /db_xref="CDD:238994"
     gene            complement(158515..159072)
                     /gene="gerD"
                     /locus_tag="BSU01550"
                     /db_xref="GeneID:938910"
     CDS             complement(158515..159072)
                     /gene="gerD"
                     /locus_tag="BSU01550"
                     /function="16.13: Shape"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 17122337, 10618233,
                     10376819; Product type f: factor"
                     /codon_start=1
                     /transl_table=11
                     /product="spore germination protein GerD"
                     /protein_id="NP_388036.1"
                     /db_xref="GI:16077223"
                     /db_xref="GeneID:938910"
                     /translation="MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKT
                     DDGKKAIKELLNDDAMNEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEGFA
                     KTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFRSYLEEVINETL
                     SSPLYKKQFEDELKKAAKDTAKESE"
     gene            159182..159778
                     /gene="kbaA"
                     /locus_tag="BSU01560"
                     /db_xref="GeneID:938913"
     CDS             159182..159778
                     /gene="kbaA"
                     /locus_tag="BSU01560"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15849754, 16850406,
                     8576055; Product type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="kinB-signaling pathway activation protein"
                     /protein_id="NP_388037.1"
                     /db_xref="GI:16077224"
                     /db_xref="GeneID:938913"
                     /translation="MKSRGLVRFFFSILAVGALITSIVGFALKWGEYRGLFLTFEAGQ
                     IFSVLFWFIGVGMIFSVISQMGFFVFLTVHRFALEILRSSSLWNLLQLFFILFVAFDL
                     MYVRFLFFGESGESLAGYAWLPVFLLIFGVITAYIKQKQSSKKTFVSSLFLMVVITAL
                     EWFPALRVNDEDWLYLMLFPLMACNAFQLLMLPKFAAK"
     misc_feature    159230..159766
                     /gene="kbaA"
                     /locus_tag="BSU01560"
                     /note="KinB-signalling pathway activation in sporulation;
                     Region: KbaA; pfam14089"
                     /db_xref="CDD:258310"
     gene            complement(159779..160543)
                     /gene="ybaN"
                     /locus_tag="BSU01570"
                     /db_xref="GeneID:938911"
     CDS             complement(159779..160543)
                     /gene="ybaN"
                     /locus_tag="BSU01570"
                     /function="16.13: Shape"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 12662922, 15547282;
                     Product type ph: phenotype"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase PdaB"
                     /protein_id="NP_388038.1"
                     /db_xref="GI:16077225"
                     /db_xref="GeneID:938911"
                     /translation="MNHFYVWHIKRVKQLIIILIAAFAAASFFYIQRAVPLPVFSTDT
                     GPKAIYKGETDSKDISLTFDISWGDERAEPILNTLKANGIKNATFFLSASWAERHPDT
                     VARIVKDGHQIGSMGYAYKNYANLESSEIKKDMNRAQTAFEKLGVKDIQLLRPPTGQF
                     NKNVLKVAKQYNYTVVHYSVNSQDWTNPGVEKIIDNVTKQVSGGDIILLHASDSAKQT
                     EEALPDIIHQLKEKGLKNVTVGDLIANSDAKSAEVK"
     misc_feature    complement(159812..160543)
                     /gene="ybaN"
                     /locus_tag="BSU01570"
                     /note="Predicted xylanase/chitin deacetylase [Carbohydrate
                     transport and metabolism]; Region: CDA1; COG0726"
                     /db_xref="CDD:223798"
     misc_feature    complement(159809..160384)
                     /gene="ybaN"
                     /locus_tag="BSU01570"
                     /note="Putative catalytic NodB homology domain of Bacillus
                     subtilis putative polysaccharide deacetylase PdaB, and its
                     bacterial homologs; Region: CE4_BsPdaB_like; cd10949"
                     /db_xref="CDD:200573"
     misc_feature    complement(order(159914..159916,159920..159922,
                     159989..159994,160010..160012,160073..160078,
                     160082..160084,160181..160198,160349..160360))
                     /gene="ybaN"
                     /locus_tag="BSU01570"
                     /note="NodB motif; other site"
                     /db_xref="CDD:200573"
     misc_feature    complement(order(159914..159916,159920..159922,
                     160010..160012,160070..160078,160184..160186,
                     160196..160198,160349..160354))
                     /gene="ybaN"
                     /locus_tag="BSU01570"
                     /note="putative active site [active]"
                     /db_xref="CDD:200573"
     misc_feature    complement(order(159914..159916,159992..159994,
                     160082..160084,160352..160354))
                     /gene="ybaN"
                     /locus_tag="BSU01570"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:200573"
     gene            160893..162445
                     /gene="rrnI-16S"
                     /locus_tag="BSU_rRNA_23"
                     /db_xref="GeneID:938908"
     rRNA            160893..162445
                     /gene="rrnI-16S"
                     /locus_tag="BSU_rRNA_23"
                     /product="ribosomal RNA-16S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938908"
     gene            162610..165535
                     /gene="rrnI-23S"
                     /locus_tag="BSU_rRNA_14"
                     /db_xref="GeneID:938905"
     rRNA            162610..165535
                     /gene="rrnI-23S"
                     /locus_tag="BSU_rRNA_14"
                     /product="ribosomal RNA-23S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938905"
     gene            165591..165707
                     /gene="rrnI-5S"
                     /locus_tag="BSU_rRNA_15"
                     /db_xref="GeneID:938909"
     rRNA            165591..165707
                     /gene="rrnI-5S"
                     /locus_tag="BSU_rRNA_15"
                     /product="ribosomal RNA-5S"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938909"
     gene            165754..165825
                     /gene="trnI-Asn"
                     /locus_tag="BSU_tRNA_23"
                     /db_xref="GeneID:2914257"
     tRNA            165754..165825
                     /gene="trnI-Asn"
                     /locus_tag="BSU_tRNA_23"
                     /product="tRNA-Asn"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914257"
     gene            165830..165902
                     /gene="trnI-Thr"
                     /locus_tag="BSU_tRNA_24"
                     /db_xref="GeneID:2914258"
     tRNA            165830..165902
                     /gene="trnI-Thr"
                     /locus_tag="BSU_tRNA_24"
                     /product="tRNA-Thr"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914258"
     gene            165959..166033
                     /gene="trnI-Gly"
                     /locus_tag="BSU_tRNA_25"
                     /db_xref="GeneID:938904"
     tRNA            165959..166033
                     /gene="trnI-Gly"
                     /locus_tag="BSU_tRNA_25"
                     /product="tRNA-Gly"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938904"
     gene            166064..166140
                     /gene="trnI-Arg"
                     /locus_tag="BSU_tRNA_26"
                     /db_xref="GeneID:938903"
     tRNA            166064..166140
                     /gene="trnI-Arg"
                     /locus_tag="BSU_tRNA_26"
                     /product="tRNA-Arg"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938903"
     gene            166168..166244
                     /gene="trnI-Pro"
                     /locus_tag="BSU_tRNA_27"
                     /db_xref="GeneID:938902"
     tRNA            166168..166244
                     /gene="trnI-Pro"
                     /locus_tag="BSU_tRNA_27"
                     /product="tRNA-Pro"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938902"
     gene            166253..166328
                     /gene="trnI-Ala"
                     /locus_tag="BSU_tRNA_28"
                     /db_xref="GeneID:2914261"
     tRNA            166253..166328
                     /gene="trnI-Ala"
                     /locus_tag="BSU_tRNA_28"
                     /product="tRNA-Ala"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914261"
     gene            166500..168053
                     /gene="rrnH-16S"
                     /locus_tag="BSU_rRNA_16"
                     /db_xref="GeneID:938899"
     rRNA            166500..168053
                     /gene="rrnH-16S"
                     /locus_tag="BSU_rRNA_16"
                     /product="ribosomal RNA-16S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938899"
     gene            168218..171141
                     /gene="rrnH-23S"
                     /locus_tag="BSU_rRNA_29"
                     /db_xref="GeneID:938896"
     rRNA            168218..171141
                     /gene="rrnH-23S"
                     /locus_tag="BSU_rRNA_29"
                     /product="ribosomal RNA-23S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938896"
     gene            171197..171314
                     /gene="rrnH-5S"
                     /locus_tag="BSU_rRNA_24"
                     /db_xref="GeneID:938894"
     rRNA            171197..171314
                     /gene="rrnH-5S"
                     /locus_tag="BSU_rRNA_24"
                     /product="ribosomal RNA-5S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938894"
     gene            171498..173049
                     /gene="rrnG-16S"
                     /locus_tag="BSU_rRNA_25"
                     /db_xref="GeneID:938898"
     rRNA            171498..173049
                     /gene="rrnG-16S"
                     /locus_tag="BSU_rRNA_25"
                     /product="ribosomal RNA-16S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938898"
     gene            173214..176141
                     /gene="rrnG-23S"
                     /locus_tag="BSU_rRNA_27"
                     /db_xref="GeneID:938897"
     rRNA            173214..176141
                     /gene="rrnG-23S"
                     /locus_tag="BSU_rRNA_27"
                     /product="ribosomal RNA-23S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:938897"
     gene            176197..176315
                     /gene="rrnG-5S"
                     /locus_tag="BSU_rRNA_28"
                     /db_xref="GeneID:2914262"
     rRNA            176197..176315
                     /gene="rrnG-5S"
                     /locus_tag="BSU_rRNA_28"
                     /product="ribosomal RNA-5S"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:2914262"
     gene            177083..178519
                     /gene="ybaR"
                     /locus_tag="BSU01580"
                     /db_xref="GeneID:938890"
     CDS             177083..178519
                     /gene="ybaR"
                     /locus_tag="BSU01580"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type m:
                     membrane component"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter YbaR"
                     /protein_id="NP_388039.1"
                     /db_xref="GI:16077226"
                     /db_xref="GeneID:938890"
                     /translation="MNNSFTLKQQWFGNIRKDILAGILVALALIPEAIGFSIIAGVDP
                     MVGLYASFCIAIIISIFGGRPGMISAATGSMAVVMVSLVADHGLQYLFAATILTGIIQ
                     VILGISKIARLMKFIPRSVMIGFVNALAILIFSAQLPQFEGASWSMYAMLAGSLVIIY
                     VLPRFTTAVPSPLVAIIVMTIIAVTFHVDVRTVGDMGNISSSLPHFLIPDVPFTFETL
                     QIIFPYSIALAFVGLLESLLTAQIIDEMTDTDSDKNKESRGQGIANIVTGFFGGMAGC
                     AMIGQSVINTKAGGRGRLSAFVAGAFLMFLIAVLSHVVVKIPMAALVAVMVMVSVGTF
                     DWSSLKGLKKAPLTDSIVMVVTVVTVVVTDDLSKGVFVGVLLSAVFFVAKISKLKIVS
                     HAEDQKLRTYQVKGQIFFASVTDLTNAFIYQEDIERVVIDLTEAHVWDDSGAAALDKI
                     VAKFKEQGIEAELKGLNKASKSLMKQMA"
     misc_feature    177083..178516
                     /gene="ybaR"
                     /locus_tag="BSU01580"
                     /note="Sulfate permease and related transporters (MFS
                     superfamily) [Inorganic ion transport and metabolism];
                     Region: SUL1; COG0659"
                     /db_xref="CDD:223732"
     misc_feature    177098..177331
                     /gene="ybaR"
                     /locus_tag="BSU01580"
                     /note="Sulfate transporter N-terminal domain with GLY
                     motif; Region: Sulfate_tra_GLY; pfam13792"
                     /db_xref="CDD:258076"
     misc_feature    177395..178135
                     /gene="ybaR"
                     /locus_tag="BSU01580"
                     /note="Sulfate transporter family; Region: Sulfate_transp;
                     pfam00916"
                     /db_xref="CDD:250221"
     misc_feature    178265..178513
                     /gene="ybaR"
                     /locus_tag="BSU01580"
                     /note="Sulphate Transporter and Anti-Sigma factor
                     antagonist domain of SulP-like sulfate transporters, plays
                     a role in the function and regulation of the transport
                     activity, proposed general NTP binding function; Region:
                     STAS_SulP_like_sulfate_transporter; cd07042"
                     /db_xref="CDD:132913"
     gene            178665..179585
                     /gene="ybaS"
                     /locus_tag="BSU01590"
                     /db_xref="GeneID:938892"
     CDS             178665..179585
                     /gene="ybaS"
                     /locus_tag="BSU01590"
                     /function="7: Transport and binding proteins"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388040.2"
                     /db_xref="GI:255767040"
                     /db_xref="GeneID:938892"
                     /translation="MPLLTPTSVVLGVLLSQFLNGYEWAVPWIFAFITFAGSLSANFQ
                     SLRHALSHPLPMILALFVLHIFMPLFAWGSGHLIFKGDPLTITGLTLAVVIPTGITSL
                     IWAAMYKGNVGLTLSIILVDTVLSPLIVPLSLSLLAGAQVHMDVWGMMKGLIVMVVIP
                     SFLGMLFNQMSSPERTAFVSSALSPFSKLCLMAVIAINSSAIAPYFKSIDLRFAGIAV
                     TVFFIALTGYAAAWLIGKMMKRRQEEIVSLIFTGGMRNISAGAVLAVTFFPSQVAVPV
                     VIGMLFQQILAALFGYMLNRFELKPMLQKA"
     misc_feature    178665..179582
                     /gene="ybaS"
                     /locus_tag="BSU01590"
                     /note="Predicted Na+-dependent transporter [General
                     function prediction only]; Region: COG0385"
                     /db_xref="CDD:223462"
     gene            complement(179595..180347)
                     /gene="ybbA"
                     /locus_tag="BSU01600"
                     /db_xref="GeneID:938887"
     CDS             complement(179595..180347)
                     /gene="ybbA"
                     /locus_tag="BSU01600"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 12354229, 2974033; Product type pe:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388041.2"
                     /db_xref="GI:255767041"
                     /db_xref="GeneID:938887"
                     /translation="MKGSLSEHKAGNRRFTLYLPPSYSTDSGGFPAVYVQDGSSLFQN
                     QIELLESAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSDIT
                     NQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILKYPSMFGKIGSISGSYWYENA
                     AETIHISSLKPGTARVFMSIGSEEGREKQSIQRHMLKKTKQVHQSLKEKGFTEDQLCL
                     SIEKGAVHHHKYFCKQFINALEWLYGKNRSTL"
     misc_feature    complement(179622..180317)
                     /gene="ybbA"
                     /locus_tag="BSU01600"
                     /note="Putative esterase; Region: Esterase; pfam00756"
                     /db_xref="CDD:250111"
     misc_feature    complement(179604..180311)
                     /gene="ybbA"
                     /locus_tag="BSU01600"
                     /note="Predicted hydrolase of the alpha/beta superfamily
                     [General function prediction only]; Region: COG2819"
                     /db_xref="CDD:225375"
     gene            complement(180344..181354)
                     /gene="feuC"
                     /locus_tag="BSU01610"
                     /db_xref="GeneID:938893"
     CDS             complement(180344..181354)
                     /gene="feuC"
                     /locus_tag="BSU01610"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 15849754, 16850406, 2651410; Product type t :
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-uptake system permease protein FeuC"
                     /protein_id="NP_388042.2"
                     /db_xref="GI:255767042"
                     /db_xref="GeneID:938893"
                     /translation="MAKKYALFIALILVVSYFSLTSGSFSVRPAELLSTLFQIDPNPQ
                     YEILLFDLRLPRVVMAAIIGLGLGIAGAVIQAITRNGLADPGILGINAGAGAGIVAFM
                     LLFQGQKEVTSIAAAMGMPLFGLIGGLIAAILIYIFAWHRGNLDSGRIILVGIAINSG
                     FSALSLFLSLKMDPQDYQMAMVWKNGSIWSANWTYITAVLPWMLLFIPILIGKSRLLD
                     TIRFDEDTVRSLGISSNKEKTILLVACVAIISACVSVAGSMAFVGLIAPHISRRLAGV
                     EHRYILPLSGLIGMLLVISADFAGKLFFQPAEVPAGIILAILGVPYFLYLLFKQKKGE
                     NA"
     misc_feature    complement(180374..181186)
                     /gene="feuC"
                     /locus_tag="BSU01610"
                     /note="Transmembrane subunit (TM), of Periplasmic Binding
                     Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters involved in the uptake of siderophores, heme,
                     vitamin B12, or the divalent cations Mg2+ and Zn2+.
                     PBP-dependent ABC transporters consist of...; Region:
                     TM_ABC_iron-siderophores_like; cd06550"
                     /db_xref="CDD:119348"
     misc_feature    complement(order(180521..180523,180542..180544,
                     180665..180673,180677..180694,180698..180703,
                     180707..180715,180719..180724,181112..181120,
                     181130..181132))
                     /gene="feuC"
                     /locus_tag="BSU01610"
                     /note="ABC-ATPase subunit  interface; other site"
                     /db_xref="CDD:119348"
     misc_feature    complement(order(180374..180376,180383..180388,
                     180395..180397,180404..180409,180416..180418,
                     180572..180574,180800..180802,180809..180814,
                     180848..180850,180854..180859,180866..180868,
                     180875..180880,180887..180892,180899..180904,
                     180908..180910,181094..181096,181109..181111,
                     181115..181117))
                     /gene="feuC"
                     /locus_tag="BSU01610"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:119348"
     misc_feature    complement(order(180425..180427,180452..180454,
                     180584..180586,180596..180598,180770..180772,
                     180848..180850))
                     /gene="feuC"
                     /locus_tag="BSU01610"
                     /note="putative PBP binding regions; other site"
                     /db_xref="CDD:119348"
     gene            complement(181347..182351)
                     /gene="feuB"
                     /locus_tag="BSU01620"
                     /db_xref="GeneID:938884"
     CDS             complement(181347..182351)
                     /gene="feuB"
                     /locus_tag="BSU01620"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 15849754, 16850406, 2651410; Product type t :
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-uptake system permease protein FeuB"
                     /protein_id="NP_388043.1"
                     /db_xref="GI:16077230"
                     /db_xref="GeneID:938884"
                     /translation="MYSKQWTRIILITSPFAIALSLLLSILYGAKHLSTDIVFTSLIH
                     FDPGNTDHQIIWHSRIPRAAGALLIGAALAVSGALMQGITRNYLASPSIMGVSDGSAF
                     IITLCMVLLPQSSSIEMMIYSFIGSALGAVLVFGLAAMMPNGFTPVQLAIIGTVTSML
                     LSSLSAAMSIYFQISQDLSFWYSARLHQMSPDFLKLAAPFFLIGIIMAISLSKKVTAV
                     SLGDDISKSLGQKKKTIKIMAMLSVIILTGSAVALAGKIAFVGLVVPHITRFLVGSDY
                     SRLIPCSCILGGIFLTLCDLASRFINYPFETPIEVVTSIIGVPFFLYLIKRKGGEQNG
                     "
     misc_feature    complement(181377..182129)
                     /gene="feuB"
                     /locus_tag="BSU01620"
                     /note="Transmembrane subunit (TM), of Periplasmic Binding
                     Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters involved in the uptake of siderophores, heme,
                     vitamin B12, or the divalent cations Mg2+ and Zn2+.
                     PBP-dependent ABC transporters consist of...; Region:
                     TM_ABC_iron-siderophores_like; cd06550"
                     /db_xref="CDD:119348"
     misc_feature    complement(order(181524..181526,181545..181547,
                     181668..181676,181680..181697,181701..181706,
                     181710..181718,181722..181727,182091..182099,
                     182109..182111))
                     /gene="feuB"
                     /locus_tag="BSU01620"
                     /note="ABC-ATPase subunit  interface; other site"
                     /db_xref="CDD:119348"
     misc_feature    complement(order(181377..181379,181386..181391,
                     181398..181400,181407..181412,181419..181421,
                     181575..181577,181803..181805,181812..181817,
                     181845..181847,181851..181856,181863..181865,
                     181872..181877,181884..181889,181896..181901,
                     181905..181907,182073..182075,182088..182090,
                     182094..182096))
                     /gene="feuB"
                     /locus_tag="BSU01620"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:119348"
     misc_feature    complement(order(181428..181430,181455..181457,
                     181587..181589,181599..181601,181773..181775,
                     181845..181847))
                     /gene="feuB"
                     /locus_tag="BSU01620"
                     /note="putative PBP binding regions; other site"
                     /db_xref="CDD:119348"
     gene            complement(182370..183323)
                     /gene="feuA"
                     /locus_tag="BSU01630"
                     /db_xref="GeneID:938891"
     CDS             complement(182370..183323)
                     /gene="feuA"
                     /locus_tag="BSU01630"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 8388528; Product type lp:
                     lipoprotein"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-uptake system-binding protein"
                     /protein_id="NP_388044.1"
                     /db_xref="GI:16077231"
                     /db_xref="GeneID:938891"
                     /translation="MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYL
                     DKTYEVTVPTDKIAITGSVESMEDAKLLDVHPQGAISFSGKFPDMFKDITDKAEPTGE
                     KMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLT
                     GKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYG
                     DLGLKAPNEVKAAKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWK
                     SLKAVKEDHVYVNSVDPLAQGGTAWSKVRFLKAAAEKLTQN"
     misc_feature    complement(182373..183266)
                     /gene="feuA"
                     /locus_tag="BSU01630"
                     /note="ABC-type Fe3+-hydroxamate transport system,
                     periplasmic component [Inorganic ion transport and
                     metabolism]; Region: FepB; COG0614"
                     /db_xref="CDD:223687"
     misc_feature    complement(182433..183182)
                     /gene="feuA"
                     /locus_tag="BSU01630"
                     /note="Periplasmic binding protein FeuA.  These proteins
                     have predicted to function as initial receptors in ABC
                     transport of metal ions in some eubacterial species.  They
                     belong to the TroA superfamily of periplasmic metal
                     binding proteins that share a distinct...; Region: FeuA;
                     cd01138"
                     /db_xref="CDD:238558"
     misc_feature    complement(order(182622..182624,182712..182714,
                     182952..182954,182958..182960,183015..183017,
                     183078..183080,183132..183137))
                     /gene="feuA"
                     /locus_tag="BSU01630"
                     /note="putative ligand binding residues [chemical
                     binding]; other site"
                     /db_xref="CDD:238558"
     gene            complement(183414..185003)
                     /gene="ybbB"
                     /locus_tag="BSU01640"
                     /db_xref="GeneID:938888"
     CDS             complement(183414..185003)
                     /gene="ybbB"
                     /locus_tag="BSU01640"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pr:  regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="NP_388045.1"
                     /db_xref="GI:16077232"
                     /db_xref="GeneID:938888"
                     /translation="MQNAVIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGNGYIS
                     IGTNTNPLQKKTLYVCPPNETFGFTPAADGHIDACIIRLLSYIKETGQDIFTPCTESE
                     LAKLKLMNVSHIENLAVRLQELAALWNESSQLSQLKCVIEVQSLIYDLFTASLSDQTD
                     THSAIEKTKHYIETHADTKITLAQLSQMAGISAKHYSESFKKWTGQSVTEFITKTRIT
                     KAKRLMAKSNCKLKEIAHQTGYQDEFYFSRIFKKYTGCSPTSYMKKRRKKIAAYGRGT
                     MGHLIPLHHIPFAAALHPKWTSYYYQHYSTDIPVQLSAYRFNEKWEENLYTLSQAEPD
                     VIVSMDSISPEEQDRLNRIAEVMYLPSEESWRTHFLQTASFLKEESEAEKWLADYDQQ
                     TTAAKKTLQHVQGLRFLFLRLHKQNFYLAHNRSVREVFFGDLGFSSATTADTPSEQAI
                     SLENIANYQADCMMLFLFKEPETIAYYQQLQQTEAWQNLSAVRDNRVYLLSLDPWNEY
                     SACGHERIVQQTVSLLSGDCP"
     misc_feature    complement(184365..184490)
                     /gene="ybbB"
                     /locus_tag="BSU01640"
                     /note="Bacterial regulatory helix-turn-helix proteins,
                     AraC family; Region: HTH_AraC; pfam00165"
                     /db_xref="CDD:249644"
     misc_feature    complement(184218..184469)
                     /gene="ybbB"
                     /locus_tag="BSU01640"
                     /note="helix_turn_helix, arabinose operon control protein;
                     Region: HTH_ARAC; smart00342"
                     /db_xref="CDD:197666"
     misc_feature    complement(184215..184328)
                     /gene="ybbB"
                     /locus_tag="BSU01640"
                     /note="Bacterial regulatory helix-turn-helix proteins,
                     AraC family; Region: HTH_AraC; pfam00165"
                     /db_xref="CDD:249644"
     misc_feature    complement(183468..184235)
                     /gene="ybbB"
                     /locus_tag="BSU01640"
                     /note="Periplasmic binding protein FeuA.  These proteins
                     have predicted to function as initial receptors in ABC
                     transport of metal ions in some eubacterial species.  They
                     belong to the TroA superfamily of periplasmic metal
                     binding proteins that share a distinct...; Region: FeuA;
                     cd01138"
                     /db_xref="CDD:238558"
     misc_feature    complement(183504..184199)
                     /gene="ybbB"
                     /locus_tag="BSU01640"
                     /note="Periplasmic binding protein; Region: Peripla_BP_2;
                     pfam01497"
                     /db_xref="CDD:250662"
     misc_feature    complement(order(183663..183665,183756..183758,
                     183981..183983,183987..183989,184065..184067,
                     184125..184127,184179..184184))
                     /gene="ybbB"
                     /locus_tag="BSU01640"
                     /note="putative ligand binding residues [chemical
                     binding]; other site"
                     /db_xref="CDD:238558"
     gene            complement(185194..186438)
                     /gene="ybbC"
                     /locus_tag="BSU01650"
                     /db_xref="GeneID:938889"
     CDS             complement(185194..186438)
                     /gene="ybbC"
                     /locus_tag="BSU01650"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388046.1"
                     /db_xref="GI:16077233"
                     /db_xref="GeneID:938889"
                     /translation="MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTL
                     LPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYENPDIKLTALFGPEHGVRGDAQAG
                     DEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAM
                     EAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFN
                     KEFSIDADLTVVKMKHWKRKMDFDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNIS
                     EGRGTTKPFELIGAPFIKSTELEETLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQL
                     YVTDRDKFEAVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVEN
                     IINSYEKTLQQFSKTRKKYLIY"
     misc_feature    complement(185197..186438)
                     /gene="ybbC"
                     /locus_tag="BSU01650"
                     /note="Uncharacterized protein conserved in bacteria
                     [Function unknown]; Region: COG3876"
                     /db_xref="CDD:226393"
     gene            complement(186452..188380)
                     /gene="ybbD"
                     /locus_tag="BSU01660"
                     /db_xref="GeneID:938881"
     CDS             complement(186452..188380)
                     /gene="ybbD"
                     /locus_tag="BSU01660"
                     /EC_number="3.2.1.52"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 8063094; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="NP_388047.1"
                     /db_xref="GI:16077234"
                     /db_xref="GeneID:938881"
                     /translation="MRPVFPLILSAVLFLSCFFGARQTEASASKRAIDANQIVNRMSL
                     DEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQT
                     VQLTDDYQKASPKIPLMLSIDQEGGIVTRLGEGTNFPGNMALGAARSRINAYQTGSII
                     GKELSALGINTDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQDIAS
                     ALKHFPGHGDTDVDSHYGLPLVSHGQERLREVELYPFQKAIDAGADMVMTAHVQFPAF
                     DDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALNMKAIADHFGQEEA
                     VVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISL
                     KIKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPK
                     KGSRILIVAPYEEQTASIEQTIHDLIKRKKIKPVSLSKMNFASQVFKTEHEKQVKEAD
                     YIITGSYVVKNDPVVNDGVIDDTISDSSKWATVFPRAVMKAALQHNKPFVLMSLRNPY
                     DAANFEEAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAKPKGTLPVDIPSVTKPG
                     NTLYPLGYGLNIKTGRPL"
     misc_feature    complement(186986..188257)
                     /gene="ybbD"
                     /locus_tag="BSU01660"
                     /note="Beta-glucosidase-related glycosidases [Carbohydrate
                     transport and metabolism]; Region: BglX; COG1472"
                     /db_xref="CDD:224389"
     misc_feature    complement(186467..187078)
                     /gene="ybbD"
                     /locus_tag="BSU01660"
                     /note="Glycosyl hydrolase family 3 C-terminal domain;
                     Region: Glyco_hydro_3_C; pfam01915"
                     /db_xref="CDD:250964"
     gene            complement(188408..189733)
                     /gene="ybbE"
                     /locus_tag="BSU01670"
                     /db_xref="GeneID:938886"
     CDS             complement(188408..189733)
                     /gene="ybbE"
                     /locus_tag="BSU01670"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 16452451; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388048.2"
                     /db_xref="GI:255767043"
                     /db_xref="GeneID:938886"
                     /translation="MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQF
                     STKKLRKVDQMIERDIAAGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMK
                     TRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRV
                     IDVLQHQSGLPSSFYFYTPEKAGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYM
                     LLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGV
                     IQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISL
                     FDQKTADLFTAPSATDPTFALGWRRNGSKSMEWMFGPHASENAYGHTGWTGTVTIIDP
                     AYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME"
     misc_feature    complement(188411..189727)
                     /gene="ybbE"
                     /locus_tag="BSU01670"
                     /note="putative periplasmic esterase; Provisional; Region:
                     PRK03642"
                     /db_xref="CDD:179620"
     gene            complement(189790..191157)
                     /gene="ybbF"
                     /locus_tag="BSU01680"
                     /db_xref="GeneID:938879"
     CDS             complement(189790..191157)
                     /gene="ybbF"
                     /locus_tag="BSU01680"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406, 10627040; Product
                     type pt:  transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system EIIBC component YbbF"
                     /protein_id="NP_388049.3"
                     /db_xref="GI:255767044"
                     /db_xref="GeneID:938879"
                     /translation="MSKENNYHHLAQKILELCGGKSNISSYTHCMTRLRITPYDESKA
                     DAQALRKLDGVLGVVEAETLQIILGTGVVNHVTAAFSKLVSAEEGADVKEAAAKKKAD
                     INRKNATPFKLFLRKIASIFIPLIPALVASGLITGITKAIIQAGWLSADSQIAIILTV
                     IGSGLFTYLGILVGINASKEFGGTPALGALAGILIINPEIAKISLFGEELLPGRGGLI
                     GVLFAAIFIAYTEQFIRRFIPQSLDIIVTPTVSLLITGIVTYVVFMPLGGFISDAITS
                     GLLSILDIGGIAAGFILGATFLPLVVTGLHQGLTPVHMELINSIGNDPLLPILAMGGA
                     GQVGAAFAVFVKTKKTTLRKAIAGGLPSGLLGIGEPLIFGVTLPLGRPFLTACLGAGI
                     GGAFQAYFQVATIAIGVSGLPLSFLVLPSQIILYIVGLFISYAAGFLLTYAFGYKDEM
                     ASQFD"
     misc_feature    complement(189826..191142)
                     /gene="ybbF"
                     /locus_tag="BSU01680"
                     /note="PTS system, sucrose-specific IIBC component;
                     Region: PTS-II-BC-sucr; TIGR01996"
                     /db_xref="CDD:131051"
     misc_feature    complement(190909..191136)
                     /gene="ybbF"
                     /locus_tag="BSU01680"
                     /note="PTS_IIB, PTS system, glucose/sucrose specific IIB
                     subunit. The bacterial phosphoenolpyruvate: sugar
                     phosphotransferase system (PTS) is a multi-protein system
                     involved in the regulation of a variety of metabolic and
                     transcriptional processes. This family...; Region:
                     PTS_IIB_glc; cd00212"
                     /db_xref="CDD:238130"
     misc_feature    complement(191053..191073)
                     /gene="ybbF"
                     /locus_tag="BSU01680"
                     /note="active site turn [active]"
                     /db_xref="CDD:238130"
     misc_feature    complement(191068..191070)
                     /gene="ybbF"
                     /locus_tag="BSU01680"
                     /note="phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238130"
     misc_feature    complement(189808..190845)
                     /gene="ybbF"
                     /locus_tag="BSU01680"
                     /note="Phosphotransferase system IIC components,
                     glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
                     transport and metabolism]; Region: PtsG; COG1263"
                     /db_xref="CDD:224183"
     gene            complement(191183..192034)
                     /gene="ybbH"
                     /locus_tag="BSU01690"
                     /db_xref="GeneID:938885"
     CDS             complement(191183..192034)
                     /gene="ybbH"
                     /locus_tag="BSU01690"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pr:  regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="RpiR family transcriptional regulator"
                     /protein_id="NP_388050.1"
                     /db_xref="GI:16077237"
                     /db_xref="GeneID:938885"
                     /translation="MATGGLAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISA
                     LANSSDAAVIRLCKSLGLKGFQDLKMRVAGDLAKPTFQGYRDIVPHEPLPSISEKTAG
                     NAIQAIQDTSDLMDYKELERAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQAT
                     AFTDTHLVASLIANADKDDIVFAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSV
                     SALADVPLYTAHSNEALIRSAATSSRLAQLFIIDVLFLGMAAEQYETTTGYIDKTRAA
                     IQSMRIK"
     misc_feature    complement(191798..192028)
                     /gene="ybbH"
                     /locus_tag="BSU01690"
                     /note="Helix-turn-helix domain, rpiR family; Region:
                     HTH_6; pfam01418"
                     /db_xref="CDD:201784"
     misc_feature    complement(191189..192019)
                     /gene="ybbH"
                     /locus_tag="BSU01690"
                     /note="Transcriptional regulators [Transcription]; Region:
                     RpiR; COG1737"
                     /db_xref="CDD:224651"
     misc_feature    complement(191264..191683)
                     /gene="ybbH"
                     /locus_tag="BSU01690"
                     /note="RpiR-like protein. RpiR contains a SIS (Sugar
                     ISomerase) domain, which is found in many phosphosugar
                     isomerases and phosphosugar binding proteins. In E. coli,
                     rpiR negatively regulates the expression of rpiB gene.
                     Both rpiB and rpiA are ribose phosphate...; Region:
                     SIS_RpiR; cd05013"
                     /db_xref="CDD:240144"
     misc_feature    complement(order(191480..191482,191612..191614))
                     /gene="ybbH"
                     /locus_tag="BSU01690"
                     /note="putative active site [active]"
                     /db_xref="CDD:240144"
     gene            complement(192051..192965)
                     /gene="murQ"
                     /locus_tag="BSU01700"
                     /db_xref="GeneID:938882"
     CDS             complement(192051..192965)
                     /gene="murQ"
                     /locus_tag="BSU01700"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.6: Maintain"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the cleavage of the lactyl ether moiety
                     of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form
                     N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate;
                     involved in MurNAc dissimilation pathway"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="NP_388051.1"
                     /db_xref="GI:16077238"
                     /db_xref="GeneID:938882"
                     /translation="MSEPLNLHRLTTESRNSQTVEIHKANTLGILKMINNEDMKVAAA
                     VQEVLPDIKTAVDCAYESFQNGGRLIYTGAGTSGRLGVMDAVECPPTYSVSPDQVIGI
                     MAGGPEAFLQAAEGIEDSEEAGAEDLRNIQLTSNDTVIAIAASGRTPYAAGALRYARK
                     VGAHTIALTCNENSAISKDADHSIEVVVGPEAITGSTRMKAATAHKMILNMISTAVMV
                     KIGKVYENLMVDVNVSNKKLKERAISIIQSLTNASYDTARYTLEQADHHVKTAIVMLK
                     TSTDQKQAQTLLDEANGFIDKAIEHYHP"
     misc_feature    complement(192066..192938)
                     /gene="murQ"
                     /locus_tag="BSU01700"
                     /note="N-acetylmuramic acid 6-phosphate etherase; Region:
                     TIGR00274"
                     /db_xref="CDD:129375"
     misc_feature    complement(192144..192914)
                     /gene="murQ"
                     /locus_tag="BSU01700"
                     /note="N-acetylmuramic acid 6-phosphate etherase. Members
                     of this family contain the SIS (Sugar ISomerase) domain.
                     The SIS domain is found in many phosphosugar isomerases
                     and phosphosugar binding proteins. The bacterial cell wall
                     sugar N-acetylmuramic acid...; Region: SIS_Etherase;
                     cd05007"
                     /db_xref="CDD:240140"
     misc_feature    complement(order(192537..192539,192735..192737))
                     /gene="murQ"
                     /locus_tag="BSU01700"
                     /note="putative active site [active]"
                     /db_xref="CDD:240140"
     gene            complement(193075..193557)
                     /gene="ybbJ"
                     /locus_tag="BSU01710"
                     /db_xref="GeneID:938883"
     CDS             complement(193075..193557)
                     /gene="ybbJ"
                     /locus_tag="BSU01710"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase YbbJ"
                     /protein_id="NP_388052.2"
                     /db_xref="GI:255767045"
                     /db_xref="GeneID:938883"
                     /translation="MTQDISLSFYKPEHLPELQSFTLTNDDKRFTSLPKEVLSQALGI
                     QDRYPVVILKDDLPVGFFILHASKETLASYSNNPFALLLSSLSLTAVHHGKGYAKKAM
                     LLLPAFVSGYFPWCDEIILAVNHLNIRAKHLYMKSGFLDKGRRRIGPLGEQLILHHFL
                     "
     misc_feature    complement(193120..>193284)
                     /gene="ybbJ"
                     /locus_tag="BSU01710"
                     /note="Acetyltransferases, including N-acetylases of
                     ribosomal proteins [Translation, ribosomal structure and
                     biogenesis]; Region: RimL; COG1670"
                     /db_xref="CDD:224584"
     gene            complement(193570..194025)
                     /gene="ybbK"
                     /locus_tag="BSU01720"
                     /db_xref="GeneID:938877"
     CDS             complement(193570..194025)
                     /gene="ybbK"
                     /locus_tag="BSU01720"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388053.2"
                     /db_xref="GI:255767046"
                     /db_xref="GeneID:938877"
                     /translation="MILVSSCLGGIECRYNGSHAASEKIRKLVDEKKAVMACPELLGG
                     FSTPREPAEIIGGTGEDVLNGTAKIVTASGEDVTELYMEGAAKTLAYAKEINASAVIL
                     KENSPSCGSGFIYNGTFSGKKITGSGVTAALLKQAGYRVISENELNDIL"
     misc_feature    complement(193576..194025)
                     /gene="ybbK"
                     /locus_tag="BSU01720"
                     /note="Uncharacterized conserved protein [Function
                     unknown]; Region: COG1683"
                     /db_xref="CDD:224597"
     gene            194205..194279
                     /gene="trnSL-Glu2"
                     /locus_tag="BSU_tRNA_75"
                     /db_xref="GeneID:8303028"
     tRNA            194205..194279
                     /gene="trnSL-Glu2"
                     /locus_tag="BSU_tRNA_75"
                     /product="tRNA-Glu"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:8303028"
     gene            194283..194358
                     /gene="trnSL-Val1"
                     /locus_tag="BSU_tRNA_78"
                     /db_xref="GeneID:8302937"
     tRNA            194283..194358
                     /gene="trnSL-Val1"
                     /locus_tag="BSU_tRNA_78"
                     /product="tRNA-Val"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:8302937"
     gene            194363..194435
                     /gene="trnSL-Thr1"
                     /locus_tag="BSU_tRNA_76"
                     /db_xref="GeneID:8303065"
     tRNA            194363..194435
                     /gene="trnSL-Thr1"
                     /locus_tag="BSU_tRNA_76"
                     /product="tRNA-Thr"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:8303065"
     gene            194458..194542
                     /gene="trnSL-Tyr1"
                     /locus_tag="BSU_tRNA_77"
                     /db_xref="GeneID:8303046"
     tRNA            194458..194542
                     /gene="trnSL-Tyr1"
                     /locus_tag="BSU_tRNA_77"
                     /product="tRNA-Tyr"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:8303046"
     gene            194547..194621
                     /gene="trnSL-Gln2"
                     /locus_tag="BSU_tRNA_74"
                     /db_xref="GeneID:8303064"
     tRNA            194547..194621
                     /gene="trnSL-Gln2"
                     /locus_tag="BSU_tRNA_74"
                     /product="tRNA-Gln"
                     /inference="profile:tRNAscan:1.23"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type n: RNA"
                     /function="16.2: Construct biomass (Anabolism)"
                     /db_xref="GeneID:8303064"
     gene            194849..195412
                     /gene="sigW"
                     /locus_tag="BSU01730"
                     /db_xref="GeneID:938868"
     CDS             194849..195412
                     /gene="sigW"
                     /locus_tag="BSU01730"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Member of the extracytoplasmic function sigma
                     factors which are active under specific conditions; binds
                     with the catalytic core of RNA polymerase to produce the
                     holoenzyme and directs bacterial core RNA polymerase to
                     specific promoter elements to initiate transcription: this
                     protein is involved in detoxification and protection
                     against antimicrobial"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigW"
                     /protein_id="NP_388054.1"
                     /db_xref="GI:16077241"
                     /db_xref="GeneID:938868"
                     /translation="MEMMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHE
                     AEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTE
                     GLTMYSQIVADGVLPEDAVVSLELSNTIQQKILKLPDKYRTVIVLKYIDELSLIEIGE
                     ILNIPVGTVKTRIHRGREALRKQLRDL"
     misc_feature    194849..195409
                     /gene="sigW"
                     /locus_tag="BSU01730"
                     /note="RNA polymerase sigma factor SigW; Provisional;
                     Region: PRK09641"
                     /db_xref="CDD:182012"
     misc_feature    194915..195115
                     /gene="sigW"
                     /locus_tag="BSU01730"
                     /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
                     /db_xref="CDD:252661"
     misc_feature    195236..195391
                     /gene="sigW"
                     /locus_tag="BSU01730"
                     /note="Sigma70, region (SR) 4 refers to the most
                     C-terminal of four conserved domains found in Escherichia
                     coli (Ec) sigma70, the main housekeeping sigma, and
                     related sigma-factors (SFs). A SF is a dissociable subunit
                     of RNA polymerase, it directs bacterial or...; Region:
                     Sigma70_r4; cd06171"
                     /db_xref="CDD:100119"
     misc_feature    order(195260..195262,195290..195292,195308..195313,
                     195341..195343,195347..195352,195356..195364,
                     195368..195373,195377..195379)
                     /gene="sigW"
                     /locus_tag="BSU01730"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:100119"
     gene            195426..196052
                     /gene="rsiW"
                     /locus_tag="BSU01740"
                     /db_xref="GeneID:938876"
     CDS             195426..196052
                     /gene="rsiW"
                     /locus_tag="BSU01740"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15130127; Product type r:
                     regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-W factor RsiW"
                     /protein_id="NP_388055.1"
                     /db_xref="GI:16077242"
                     /db_xref="GeneID:938876"
                     /translation="MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEKCRKHFYEM
                     EKSIALVRSTSHVEAPADFTANVMAKLPKEKKRASVKRWFRTHPVIAAAAVFIILMGG
                     GFFNSWHNDHNFSVSKQPNLVVHNHTVTVPEGETVKGDVTVKNGKLIIKGKIDGDVTV
                     VNGEKYMASAGQVTGQIEEINQLFDWTWYKMKSAGKSVLDAFNPNGEE"
     misc_feature    195426..196049
                     /gene="rsiW"
                     /locus_tag="BSU01740"
                     /note="Predicted transmembrane transcriptional regulator
                     (anti-sigma factor) [Transcription]; Region: COG5662"
                     /db_xref="CDD:227949"
     misc_feature    195432..195539
                     /gene="rsiW"
                     /locus_tag="BSU01740"
                     /note="Putative zinc-finger; Region: zf-HC2; pfam13490"
                     /db_xref="CDD:257814"
     misc_feature    <195792..195956
                     /gene="rsiW"
                     /locus_tag="BSU01740"
                     /note="Protein of unknown function (DUF342); Region:
                     DUF342; cl19219"
                     /db_xref="CDD:267572"
     gene            196213..197034
                     /gene="ybbP"
                     /locus_tag="BSU01750"
                     /db_xref="GeneID:938735"
     CDS             196213..197034
                     /gene="ybbP"
                     /locus_tag="BSU01750"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388056.2"
                     /db_xref="GI:255767047"
                     /db_xref="GeneID:938735"
                     /translation="MAFEDIPFLQYLGNAVDILLVWYVIYKLIMVIRGTKAVQLLKGI
                     VVIVLVRMASQYLGLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSRSG
                     TPVEEAQQKTIEAITKAINYMAKRRIGALLTIERDTGMGDYIETGIPLNAKVSSELLI
                     NIFIPNTPLHDGAVIMKNNEIAAAACYLPLSESPFISKELGTRHRAAVGISEVTDSLT
                     IIVSEETGGVSVAKNGDLHRELTEEALKEMLEAEFKKNTRDTSSNRWYWRGKKNG"
     misc_feature    196213..196947
                     /gene="ybbP"
                     /locus_tag="BSU01750"
                     /note="Uncharacterized conserved protein [Function
                     unknown]; Region: COG1624"
                     /db_xref="CDD:224539"
     misc_feature    196558..196923
                     /gene="ybbP"
                     /locus_tag="BSU01750"
                     /note="DisA bacterial checkpoint controller
                     nucleotide-binding; Region: DisA_N; pfam02457"
                     /db_xref="CDD:251307"
     gene            197027..198478
                     /gene="ybbR"
                     /locus_tag="BSU01760"
                     /db_xref="GeneID:938867"
     CDS             197027..198478
                     /gene="ybbR"
                     /locus_tag="BSU01760"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function; PubMedId: 16236721"
                     /codon_start=1
                     /transl_table=11
                     /product="YbbR-like domain-containing protein YbbR"
                     /protein_id="NP_388057.2"
                     /db_xref="GI:255767048"
                     /db_xref="GeneID:938867"
                     /translation="MDKFLNNRWAVKIIALLFALLLYVAVNSNQAPTPKKPGESFFPT
                     STTDEATLTDIPVKAYYDDENYVVTGVPQTVNVTIKGSTSAVKKARQTKNFEIYADME
                     HLKTGTHKVELKAKNVSDGLTISINPSVTTVTIQERTTKSFPVEVEYYNKSKMKKGYS
                     PEQPIVSPKNVQITGSKNVIDNISLVKASVNLENADETIEKEAKVTVYDKDGNALPVD
                     VEPSVIKITVPVTSPSKKVPFKIERTGSLPDGVSIANIESSPSEVTVYGSQDVLDSLE
                     FIDGVSLDLSKINKDSDIEADIPLPDGVKKISPSKVTLHIEVDSEADQKFENVPIKTV
                     GLSSSQNIEFLDPESQAIDVTAKGSPTNINKLKKSDIELYVNVSDLEDGEHSVKLEVN
                     GPQNVTWSLGRKNAKIKLTSKKSNTSTNDNSSNTSGNQDTDKQTNDQKNNQQEDTKNT
                     DKNNNDQNQDGNKDQNQDQDEDESTANSQSSSE"
     misc_feature    197027..198268
                     /gene="ybbR"
                     /locus_tag="BSU01760"
                     /note="Uncharacterized protein conserved in bacteria
                     [Function unknown]; Region: COG4856"
                     /db_xref="CDD:227193"
     misc_feature    197189..197431
                     /gene="ybbR"
                     /locus_tag="BSU01760"
                     /note="YbbR-like protein; Region: YbbR; pfam07949"
                     /db_xref="CDD:254535"
     misc_feature    197459..197710
                     /gene="ybbR"
                     /locus_tag="BSU01760"
                     /note="YbbR-like protein; Region: YbbR; pfam07949"
                     /db_xref="CDD:254535"
     misc_feature    197735..197974
                     /gene="ybbR"
                     /locus_tag="BSU01760"
                     /note="YbbR-like protein; Region: YbbR; pfam07949"
                     /db_xref="CDD:254535"
     gene            198497..199843
                     /gene="glmM"
                     /locus_tag="BSU01770"
                     /db_xref="GeneID:938632"
     CDS             198497..199843
                     /gene="glmM"
                     /locus_tag="BSU01770"
                     /EC_number="5.4.2.10"
                     /function="16.13: Shape"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the conversion of glucosamine-6-phosphate
                     to glucosamine-1-phosphate"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="NP_388058.1"
                     /db_xref="GI:16077245"
                     /db_xref="GeneID:938632"
                     /translation="MGKYFGTDGVRGVANSELTPELAFKVGRFGGYVLTKDKQRPKVL
                     IGRDTRISGHMLEGALVAGLLSIGAEVMRLGVISTPGVSYLTKAMDAEAGVMISASHN
                     PVQDNGIKFFGGDGFKLSDEQEAEIERLMDEPEDKLPRPVGADLGLVNDYFEGGQKYL
                     QFLKQTADEDFTGIHVALDCANGATSSLATHLFADLDADVSTMGTSPNGLNINDGVGS
                     THPEALSAFVKEKNADLGLAFDGDGDRLIAVDEKGNIVDGDQIMYICSKHLKSEGRLK
                     DDTVVSTVMSNLGFYKALEKEGIKSVQTAVGDRYVVEAMKKDGYNVGGEQSGHLIFLD
                     YNTTGDGLLSAIMLMNTLKATGKPLSELAAEMQKFPQLLVNVRVTDKYKVEENEKVKA
                     VISEVEKEMNGDGRILVRPSGTEPLVRVMAEAKTKELCDEYVNRIVEVVRSEMGLE"
     misc_feature    198500..199840
                     /gene="glmM"
                     /locus_tag="BSU01770"
                     /note="phosphoglucosamine mutase; Provisional; Region:
                     glmM; PRK14316"
                     /db_xref="CDD:237670"
     misc_feature    198506..199810
                     /gene="glmM"
                     /locus_tag="BSU01770"
                     /note="GlmM is a bacterial phosphoglucosamine mutase
                     (PNGM) that belongs to the alpha-D-phosphohexomutase
                     superfamily. It is required for the interconversion of
                     glucosamine-6-phosphate and glucosamine-1-phosphate in the
                     biosynthetic pathway of...; Region: GlmM; cd05802"
                     /db_xref="CDD:100095"
     misc_feature    order(198512..198514,198518..198520,198527..198529,
                     198794..198802,198824..198826,199214..199216,
                     199220..199222,199226..199231,199349..199351,
                     199412..199420,199469..199471,199475..199477,
                     199481..199483,199724..199726,199730..199738,
                     199751..199753)
                     /gene="glmM"
                     /locus_tag="BSU01770"
                     /note="active site"
                     /db_xref="CDD:100095"
     misc_feature    order(198518..198520,198794..198796,199229..199231,
                     199349..199351,199412..199414,199418..199420,
                     199469..199471,199475..199477,199481..199483,
                     199724..199726,199730..199738,199751..199753)
                     /gene="glmM"
                     /locus_tag="BSU01770"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:100095"
     misc_feature    order(198794..198796,199214..199216,199220..199222,
                     199226..199228)
                     /gene="glmM"
                     /locus_tag="BSU01770"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:100095"
     gene            200017..200187
                     /locus_tag="BSU_misc_RNA_5"
                     /db_xref="GeneID:8302932"
     misc_RNA        200017..200187
                     /locus_tag="BSU_misc_RNA_5"
                     /product="glmS"
                     /inference="profile:Rfam:8.1"
                     /db_xref="GeneID:8302932"
     gene            200277..202079
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /db_xref="GeneID:938736"
     CDS             200277..202079
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /EC_number="2.6.1.16"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Catalyzes the first step in hexosamine metabolism,
                     converting fructose-6P into glucosamine-6P using glutamine
                     as a nitrogen source"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate
                     aminotransferase"
                     /protein_id="NP_388059.1"
                     /db_xref="GI:16077246"
                     /db_xref="GeneID:938736"
                     /translation="MCGIVGYIGQLDAKEILLKGLEKLEYRGYDSAGIAVANEQGIHV
                     FKEKGRIADLREVVDANVEAKAGIGHTRWATHGEPSYLNAHPHQSALGRFTLVHNGVI
                     ENYVQLKQEYLQDVELKSDTDTEVVVQVIEQFVNGGLETEEAFRKTLTLLKGSYAIAL
                     FDNDNRETIFVAKNKSPLLVGLGDTFNVVASDAMAMLQVTNEYVELMDKEMVIVTDDQ
                     VVIKNLDGDVITRASYIAELDASDIEKGTYPHYMLKETDEQPVVMRKIIQTYQDENGK
                     LSVPGDIAAAVAEADRIYIIGCGTSYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPL
                     LSKKPLFIFLSQSGETADSRAVLVQVKALGHKALTITNVPGSTLSREADYTLLLHAGP
                     EIAVASTKAYTAQIAVLAVLASVAADKNGINIGFDLVKELGIAANAMEALCDQKDEME
                     MIAREYLTVSRNAFFIGRGLDYFVCVEGALKLKEISYIQAEGFAGGELKHGTIALIEQ
                     GTPVFALATQEHVNLSIRGNVKEVAARGANTCIISLKGLDDADDRFVLPEVNPALAPL
                     VSVVPLQLIAYYAALHRGCDVDKPRNLAKSVTVE"
     misc_feature    200277..202076
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /note="glucosamine--fructose-6-phosphate aminotransferase;
                     Reviewed; Region: PRK00331"
                     /db_xref="CDD:234729"
     misc_feature    200280..200918
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /note="Glutamine amidotransferases class-II
                     (Gn-AT)_GFAT-type. This domain is found at the N-terminus
                     of glucosamine-6P synthase (GlmS, or GFAT in humans).  The
                     glutaminase domain catalyzes amide nitrogen transfer from
                     glutamine to the appropriate substrate. In...; Region:
                     GFAT; cd00714"
                     /db_xref="CDD:238366"
     misc_feature    order(200280..200282,200355..200357,200490..200495,
                     200499..200504,200529..200531,200571..200576,
                     200643..200648)
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /note="glutaminase active site [active]"
                     /db_xref="CDD:238366"
     misc_feature    201150..201515
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /note="SIS (Sugar ISomerase) domain repeat 1 found in
                     Glucosamine 6-phosphate synthase (GlmS) and
                     Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
                     is found in many phosphosugar isomerases and phosphosugar
                     binding proteins. GlmS contains a N-terminal...; Region:
                     SIS_GlmS_GlmD_1; cd05008"
                     /db_xref="CDD:240141"
     misc_feature    order(201168..201173,201201..201206,201213..201218,
                     201237..201239,201243..201245,201255..201257,
                     201264..201266,201330..201332)
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:240141"
     misc_feature    order(201174..201179,201309..201317)
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /note="active site"
                     /db_xref="CDD:240141"
     misc_feature    201615..202070
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /note="SIS (Sugar ISomerase) domain repeat 2 found in
                     Glucosamine 6-phosphate synthase (GlmS) and
                     Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
                     is found in many phosphosugar isomerases and phosphosugar
                     binding proteins. GlmS contains a N-terminal...; Region:
                     SIS_GlmS_GlmD_2; cd05009"
                     /db_xref="CDD:240142"
     misc_feature    order(201681..201683,201723..201725,201735..201737,
                     201741..201743,201747..201749,201753..201755,
                     201765..201767,201771..201779,201783..201794,
                     201843..201848,201858..201860,201864..201869,
                     202047..202052,202065..202067)
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:240142"
     misc_feature    order(201717..201719,201726..201728)
                     /gene="glmS"
                     /locus_tag="BSU01780"
                     /note="active site"
                     /db_xref="CDD:240142"
     gene            complement(202547..203458)
                     /gene="alkA"
                     /locus_tag="BSU01800"
                     /db_xref="GeneID:938586"
     CDS             complement(202547..203458)
                     /gene="alkA"
                     /locus_tag="BSU01800"
                     /EC_number="3.2.2.21"
                     /function="16.8: Protect"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 7565865, 8376346; Product
                     type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="NP_388061.1"
                     /db_xref="GI:16077248"
                     /db_xref="GeneID:938586"
                     /translation="MTWHEVNDVIVITLPEIFDMNANLGYLTREKNECMYEIENNIIT
                     KVIAIGEIRSLVQVSVINNKQMIVQFLNDSRPVEQWKREEIVKYIHEWFDLDNDLTPF
                     YEMAKADPLLKMPARKFYGLRVIGIPDLFEALCWGVLGQQINLAFAYSLKKQFVEAFG
                     DSIEWNGKKYWVFPPYERIARLTPTDLADIKMTVKKSEYIIGIARLMASGELSREKLM
                     KMNFKDAEKNLIKIRGIGPWTANYVLMRCLRFPTAFPIDDVGLIHSIKILRNMNRKPT
                     KDEILEISVPWKEWQSYATFYLWRVLY"
     misc_feature    complement(203057..203431)
                     /gene="alkA"
                     /locus_tag="BSU01800"
                     /note="8-oxoguanine DNA glycosylase, N-terminal domain;
                     Region: OGG_N; pfam07934"
                     /db_xref="CDD:254525"
     misc_feature    complement(202553..203407)
                     /gene="alkA"
                     /locus_tag="BSU01800"
                     /note="3-methyladenine DNA glycosylase/8-oxoguanine DNA
                     glycosylase [DNA replication, recombination, and repair];
                     Region: AlkA; COG0122"
                     /db_xref="CDD:223200"
     misc_feature    complement(202559..203068)
                     /gene="alkA"
                     /locus_tag="BSU01800"
                     /note="endonuclease III; includes endonuclease III
                     (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA
                     glycosidases (Alka-family) and other DNA glycosidases;
                     Region: ENDO3c; cd00056"
                     /db_xref="CDD:238013"
     misc_feature    complement(order(202871..202873,203018..203020,
                     203027..203035))
                     /gene="alkA"
                     /locus_tag="BSU01800"
                     /note="minor groove reading motif; other site"
                     /db_xref="CDD:238013"
     misc_feature    complement(202742..202765)
                     /gene="alkA"
                     /locus_tag="BSU01800"
                     /note="helix-hairpin-helix signature motif; other site"
                     /db_xref="CDD:238013"
     misc_feature    complement(order(202562..202564,202574..202576,
                     202733..202735))
                     /gene="alkA"
                     /locus_tag="BSU01800"
                     /note="substrate binding pocket [chemical binding]; other
                     site"
                     /db_xref="CDD:238013"
     misc_feature    complement(202685..202687)
                     /gene="alkA"
                     /locus_tag="BSU01800"
                     /note="active site"
                     /db_xref="CDD:238013"
     gene            203729..204364
                     /gene="adaA"
                     /locus_tag="BSU01810"
                     /db_xref="GeneID:938648"
     CDS             203729..204364
                     /gene="adaA"
                     /locus_tag="BSU01810"
                     /EC_number="2.1.1.63"
                     /function="16.3: Control"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 1744039, 2120677,
                     7565865, 8376346; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional transcriptional activator/DNA
                     repair enzyme AdaA"
                     /protein_id="NP_388062.1"
                     /db_xref="GI:16077249"
                     /db_xref="GeneID:938648"
                     /translation="MPDSINNGHKESHDHRISNDAEMITDEKWQAIINNDAAYNNQFF
                     YAVKSTGIFCKPSCKSRVPKKENVCIFPNTEQALRANFRPCKRCKPTNEKMPDSEWVD
                     LITEYIDKNFTEKLTLESLADICHGSPYHMHRTFKKIKGITLVEYIQQVRVHAAKKYL
                     IQTNKAIGDIAICVGIANAPYFITLFKKKTGQTPARFRQMSKMEETYNGNK"
     misc_feature    203780..204346
                     /gene="adaA"
                     /locus_tag="BSU01810"
                     /note="Adenosine deaminase [Nucleotide transport and
                     metabolism]; Region: Ada; COG2169"
                     /db_xref="CDD:225080"
     misc_feature    203804..204001
                     /gene="adaA"
                     /locus_tag="BSU01810"
                     /note="Metal binding domain of Ada; Region:
                     Ada_Zn_binding; pfam02805"
                     /db_xref="CDD:251541"
     misc_feature    204050..204175
                     /gene="adaA"
                     /locus_tag="BSU01810"
                     /note="Bacterial regulatory helix-turn-helix proteins,
                     AraC family; Region: HTH_AraC; pfam00165"
                     /db_xref="CDD:249644"
     misc_feature    204209..204325
                     /gene="adaA"
                     /locus_tag="BSU01810"
                     /note="Bacterial regulatory helix-turn-helix proteins,
                     AraC family; Region: HTH_AraC; pfam00165"
                     /db_xref="CDD:249644"
     gene            204351..204890
                     /gene="adaB"
                     /locus_tag="BSU01820"
                     /db_xref="GeneID:938673"
     CDS             204351..204890
                     /gene="adaB"
                     /locus_tag="BSU01820"
                     /EC_number="2.1.1.63"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 1744039, 2120677,
                     7565865, 8376346; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-dna--protein-cysteine
                     methyltransferase"
                     /protein_id="NP_388063.1"
                     /db_xref="GI:16077250"
                     /db_xref="GeneID:938673"
                     /translation="METNKPTLYWSLLMFKDWNFYIASTLKGLVFVGSQNKPIEELFE
                     WARKRFPGSLLVEDDDKLEPYAVEITQYLEGKRKNFTVPVEYAGTQFQLAVWNALCEI
                     PYGQTKSYSDIANDINKPAAVRAVGAAIGANPVLITVPCHRVIGKNGSLTGYRGGFEM
                     KTLLLDLEKRASSEMDVPH"
     misc_feature    204369..204860
                     /gene="adaB"
                     /locus_tag="BSU01820"
                     /note="Methylated DNA-protein cysteine methyltransferase
                     [DNA replication, recombination, and repair]; Region: Ada;
                     COG0350"
                     /db_xref="CDD:223427"
     misc_feature    204369..204608
                     /gene="adaB"
                     /locus_tag="BSU01820"
                     /note="6-O-methylguanine DNA methyltransferase,
                     ribonuclease-like domain; Region: Methyltransf_1N;
                     pfam02870"
                     /db_xref="CDD:251580"
     misc_feature    204621..204857
                     /gene="adaB"
                     /locus_tag="BSU01820"
                     /note="The DNA repair protein O6-alkylguanine-DNA
                     alkyltransferase (ATase; also known as AGT, AGAT and MGMT)
                     reverses O6-alkylation DNA damage by transferring O6-alkyl
                     adducts to an active site cysteine irreversibly, without
                     inducing DNA strand breaks. ATases...; Region: ATase;
                     cd06445"
                     /db_xref="CDD:119438"
     misc_feature    order(204621..204626,204678..204683,204705..204707,
                     204714..204716,204720..204725,204729..204731,
                     204738..204743,204747..204749,204771..204773,
                     204786..204788,204807..204809)
                     /gene="adaB"
                     /locus_tag="BSU01820"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:119438"
     misc_feature    order(204678..204680,204771..204776,204780..204782,
                     204852..204854)
                     /gene="adaB"
                     /locus_tag="BSU01820"
                     /note="active site"
                     /db_xref="CDD:119438"
     gene            205409..206926
                     /gene="ndhF"
                     /locus_tag="BSU01830"
                     /db_xref="GeneID:938593"
     CDS             205409..206926
                     /gene="ndhF"
                     /locus_tag="BSU01830"
                     /EC_number="1.6.5.3"
                     /function="16.10: Respire"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Catalyzes the transfer of electrons from NADH to
                     ubiquinone"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit 5"
                     /protein_id="NP_388064.1"
                     /db_xref="GI:16077251"
                     /db_xref="GeneID:938593"
                     /translation="MLVSLSLSSLLTLFFIMLMASGISGLLFLHPRVPLSFVRIHIGI
                     LALPLLVSLLILANSGVSGNVGPWHLDSLACLMTFFVLAIGFIIQRFSVRYLMGDRSY
                     RKYFTLFTFTTGAASMTWLSGDLRLMVLFWGATLVGLTLLIRLNSAWQVASEAAKISG
                     RLFLLSWFSLFFAMMWLFHATGQWQLSLVVTNESLAGLGEWERTGIQLLIVLAVIIPA
                     AQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIILTRFSPLFHGGIASIILLLLASIS
                     VLIGTGISLVQVDYKRQLVGSTIGQMGFMLIQCALGAYIAAIIHLILHGLFKATLFLQ
                     AGSAVGRHEVSTRTNERTSYLWVMAGRILSLVIGVAFWLTAPGDGYHLISALILGWSL
                     SVSWDQLVAFGEGRIGRIAGLTVLGGAALVYFIIHHLFYKWLHTTIFQSVQPPMSAVM
                     IVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSVESHPDYLKQYIS"
     misc_feature    205448..206923
                     /gene="ndhF"
                     /locus_tag="BSU01830"
                     /note="NADH dehydrogenase subunit 5; Validated; Region:
                     PRK08601"
                     /db_xref="CDD:236310"
     misc_feature    205772..206581
                     /gene="ndhF"
                     /locus_tag="BSU01830"
                     /note="NADH-Ubiquinone/plastoquinone (complex I), various
                     chains; Region: Oxidored_q1; pfam00361"
                     /db_xref="CDD:201180"
     gene            206941..209556
                     /gene="ybcC"
                     /locus_tag="BSU01845"
                     /db_xref="GeneID:938603"
     CDS             206941..209556
                     /gene="ybcC"
                     /locus_tag="BSU01845"
                     /function="18: Unknown function"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388065.2"
                     /db_xref="GI:255767049"
                     /db_xref="GeneID:938603"
                     /translation="MGITSVLTKDNVKKIDTDIDVQERDLNVFITSASRVIAPLWPIS
                     TFAARNPWMGLENQPFDQVASWLKNTRDVDIYPSASMIRSAKNKGEIDEDFVEMGLQR
                     WLDSHSYHIPRDVAERFCHAALKLDPLPSDLLSSHELEKLVSECSGLDHIENVFMQPL
                     SSYIENQDGERLVNILDHHVIKWSKLYLDDSQAGWTMPNREEGFYRAWQHLIQYDPAL
                     SKKQRERVKGWPKEAHLALQEALFALEIPESEIQTYLEGHLLSLPGWAGMMLWRSQQS
                     SHEHALLTEYLAVRISMEWALIKPYLPLTNERSKKTISIAPLIAAWIHWGGLTLEEWS
                     QMTASEQNEYLSFAYSFDEKLRKKLWLEAWEQTYTDRLSQKIISKQRETGREKSALAQ
                     LAFCIDVRSEPFRRQLEKEGPFETIGIAGFFGVPIATCELGSKHSHASLPIIQKPQNK
                     IKEFADEDVFKKYNQRKQAIHSLSHTFKTMKQNALSSLLLPELSGPWLTLQMAARSFV
                     PRKAGRFIRNLREAWLRKPDTKLSLHHDATEAEIPVGFTDEEKVNYARQALKMMGLTE
                     NIAPLVVICGHGSQSTNNPYSAALDCGACGGAAGGFNARVLAALCNLSEVREALLAEG
                     IKIPEDTVFAAAEHNTTVDELHWLYVPELSEAAQEAFEQIEAVMPKVRHHVNAERLAQ
                     LPNFQSKLKNPKAEANRFAEDWSEIRPEWGLARNAAFIIGKRELTQDCDLEGRAFLHN
                     YDWKQDESGELLANIIVGPGTVAQWINLQYYASTVAPHYYGSGNKATQTVTAGLGVMQ
                     GNASDLLAGLPWQSVMESDHEAYHSPLRLLILIQAPREYVERLLNHDSAFLQKVQNGW
                     VRLASLDPEGCWESW"
     misc_feature    207010..209553
                     /gene="ybcC"
                     /locus_tag="BSU01845"
                     /note="Uncharacterized protein conserved in bacteria
                     [Function unknown]; Region: COG3002"
                     /db_xref="CDD:225548"
     gene            209633..210160
                     /gene="ybcF"
                     /locus_tag="BSU01860"
                     /db_xref="GeneID:938524"
     CDS             209633..210160
                     /gene="ybcF"
                     /locus_tag="BSU01860"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase-like protein YbcF"
                     /protein_id="NP_388067.1"
                     /db_xref="GI:16077254"
                     /db_xref="GeneID:938524"
                     /translation="MNVNQNKKVLFLTDIENGLEPILQEATNTSAENMLTIQSYGASI
                     SHPYGEIMRSVIFAIYQEDVEEIFVVGTKDKKTSAGNGLTQLETMKDKIQTLDYLFQN
                     CKPEFLGGTVDEWLNENSSDTIEKSVDMIRHHPLVPSYVKVRGLFVNHKGGKPSIAEV
                     PDVKTGQAMPDHCLS"
     misc_feature    209633..210151
                     /gene="ybcF"
                     /locus_tag="BSU01860"
                     /note="Carbonic anhydrase [Inorganic ion transport and
                     metabolism]; Region: CynT; COG0288"
                     /db_xref="CDD:223365"
     misc_feature    order(209858..209860,209867..209869)
                     /gene="ybcF"
                     /locus_tag="BSU01860"
                     /note="zinc binding site [ion binding]; other site"
                     /db_xref="CDD:238224"
     gene            210224..210514
                     /gene="ybcH"
                     /locus_tag="BSU01870"
                     /db_xref="GeneID:938573"
     CDS             210224..210514
                     /gene="ybcH"
                     /locus_tag="BSU01870"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 5: No homology to any previously reported
                     sequences"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388068.1"
                     /db_xref="GI:16077255"
                     /db_xref="GeneID:938573"
                     /translation="MSANLTDFVTKTIEEMNSFDRENMECIKKLIRKAIDFYHLKSYE
                     EVEETHSGNVRFLHVHSMMEENMLSKMIVVTRNGKTDLDIEGVYEGYVVREY"
     gene            210572..210946
                     /gene="ybcI"
                     /locus_tag="BSU01880"
                     /db_xref="GeneID:938568"
     CDS             210572..210946
                     /gene="ybcI"
                     /locus_tag="BSU01880"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388069.1"
                     /db_xref="GI:16077256"
                     /db_xref="GeneID:938568"
                     /translation="MKKSKGSIESEISKSITQWEKDYLGRGSVSVKTDILRDMIIVNL
                     KGILTPAEYVVCGSKEGMLSIKQTRSELVESGIEGLKDIILKITGEKVKSFHTDLSSR
                     TGERVMVFKLCNDLEKNLEKIL"
     misc_feature    210572..210943
                     /gene="ybcI"
                     /locus_tag="BSU01880"
                     /note="Uncharacterized conserved protein [Function
                     unknown]; Region: COG5609"
                     /db_xref="CDD:227896"
     gene            211429..211731
                     /gene="ybzH"
                     /locus_tag="BSU01889"
                     /db_xref="GeneID:8302965"
     CDS             211429..211731
                     /gene="ybzH"
                     /locus_tag="BSU01889"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pr:  regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="YP_003097670.1"
                     /db_xref="GI:255767050"
                     /db_xref="GeneID:8302965"
                     /translation="MEPIEVFKALSNESRLQILQWLKEPDRHFAPHEGIDMNTIGVCV
                     SQITDKLKMTQSTASQYLTILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI"
     misc_feature    211447..211728
                     /gene="ybzH"
                     /locus_tag="BSU01889"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; Region: HTH_ARSR;
                     cd00090"
                     /db_xref="CDD:238042"
     misc_feature    order(211447..211452,211456..211458,211465..211467,
                     211474..211479,211486..211491,211498..211500,
                     211633..211635,211699..211704,211708..211716,
                     211720..211728)
                     /gene="ybzH"
                     /locus_tag="BSU01889"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238042"
     misc_feature    order(211450..211455,211465..211473,211555..211563,
                     211588..211599,211603..211608,211615..211620,
                     211624..211629,211645..211653,211666..211674)
                     /gene="ybzH"
                     /locus_tag="BSU01889"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238042"
     misc_feature    order(211555..211557,211564..211566,211699..211701)
                     /gene="ybzH"
                     /locus_tag="BSU01889"
                     /note="putative Zn2+ binding site [ion binding]; other
                     site"
                     /db_xref="CDD:238042"
     gene            211859..213031
                     /gene="ybcL"
                     /locus_tag="BSU01890"
                     /db_xref="GeneID:938536"
     CDS             211859..213031
                     /gene="ybcL"
                     /locus_tag="BSU01890"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15812018, 15849754, 16850406; Product
                     type pt:  transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="NP_388070.1"
                     /db_xref="GI:16077257"
                     /db_xref="GeneID:938536"
                     /translation="MSNTWKIYILAIVSFLVGTSEYIISGILDQIAHTLGITLAAAGQ
                     LITIFSLVYALSTPVLMALTASMDRRKLMMYALGLFVFGNVLAFVLPGYGWFIAARII
                     MAMGAGVVVVTALTIAAKIASEGKQGSAIATVVMGFTASLIIGVPLGRMIAVALGWKS
                     VFGAIALLGLIAMVVIFFTLPYTEGDKPVPLLQQLALFKKRKVAMGLSITFFWLGGYS
                     VAYTYLSPYLLNISGINGKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGMTL
                     HIVTLILLSLVTHSYIGVLVILILWSFAAWSTGPTQQFHLATIEPEMSGVLLSMNQSM
                     MQFAMAVGAGIGGVFVENVSLASITWVGALGVMIAIIASLLIFNSQPKQALKDINQ"
     misc_feature    211859..213010
                     /gene="ybcL"
                     /locus_tag="BSU01890"
                     /note="Arabinose efflux permease [Carbohydrate transport
                     and metabolism]; Region: AraJ; COG2814"
                     /db_xref="CDD:225371"
     misc_feature    211877..212989
                     /gene="ybcL"
                     /locus_tag="BSU01890"
                     /note="The Major Facilitator Superfamily (MFS) is a large
                     and diverse group of secondary transporters that includes
                     uniporters, symporters, and antiporters. MFS proteins
                     facilitate the transport across cytoplasmic or internal
                     membranes of a variety of...; Region: MFS; cd06174"
                     /db_xref="CDD:119392"
     misc_feature    order(211919..211921,211928..211936,211940..211945,
                     211994..211996,212003..212008,212015..212017,
                     212027..212032,212036..212041,212177..212182,
                     212189..212194,212201..212206,212213..212215,
                     212249..212254,212261..212266,212282..212284,
                     212498..212500,212507..212512,212519..212524,
                     212531..212533,212573..212575,212585..212587,
                     212597..212599,212606..212608,212618..212620,
                     212759..212761,212768..212773,212780..212782,
                     212792..212797,212804..212806,212837..212842,
                     212849..212854,212861..212866,212873..212875)
                     /gene="ybcL"
                     /locus_tag="BSU01890"
                     /note="putative substrate translocation pore; other site"
                     /db_xref="CDD:119392"
     gene            213155..213469
                     /gene="ybcM"
                     /locus_tag="BSU01900"
                     /db_xref="GeneID:938504"
     CDS             213155..213469
                     /gene="ybcM"
                     /locus_tag="BSU01900"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388071.1"
                     /db_xref="GI:16077258"
                     /db_xref="GeneID:938504"
                     /translation="MRFLKALPRRAEVQYDCLDRTLETQENVNLNIRVNVKEVATWGV
                     NTCIISLKGLDNADDRFVLPEVNTALALFPLSIAADCLLMLPCISVVMSISSVMKSVT
                     VE"
     misc_feature    <213218..213466
                     /gene="ybcM"
                     /locus_tag="BSU01900"
                     /note="Glucosamine 6-phosphate synthetase, contains
                     amidotransferase and phosphosugar isomerase domains [Cell
                     envelope biogenesis, outer membrane]; Region: GlmS;
                     COG0449"
                     /db_xref="CDD:223526"
     gene            213941..214108
                     /gene="skfA"
                     /locus_tag="BSU01910"
                     /db_xref="GeneID:938506"
     CDS             213941..214108
                     /gene="skfA"
                     /locus_tag="BSU01910"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15812018, 16816204,
                     17069462, 17184776; Product type f: factor"
                     /codon_start=1
                     /transl_table=11
                     /product="sporulation-killing factor SkfA"
                     /protein_id="NP_388072.1"
                     /db_xref="GI:16077259"
                     /db_xref="GeneID:938506"
                     /translation="MKRNQKEWESVSKKGLMKPGGTSIVKAAGCMGCWASKSIAMTRV
                     CALPHPAMRAI"
     gene            214175..215407
                     /gene="skfB"
                     /locus_tag="BSU01920"
                     /db_xref="GeneID:938501"
     CDS             214175..215407
                     /gene="skfB"
                     /locus_tag="BSU01920"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15812018, 16816204,
                     17069462, 17184776, 18307109; Product type f: factor"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388073.2"
                     /db_xref="GI:50812176"
                     /db_xref="GeneID:938501"
                     /translation="MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLA
                     FLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLD
                     SYLPISCTLQLTNACNLSCSFCYASSGKPYPEELSSEQWILVMQKLAAHGVADITLTG
                     GEAKLIKGFKELVVVASSLFTNVNVFSNGLNWRDEEVELLSHLGNVSVQISIDGMDNT
                     HDQLRGRKGGFKESMNTIKKLSEANIPVIVAMTINESNADEVSDVVEQCANAGAFIFR
                     AGKTLSVGRATEGFKALDIDFEEMVQIQLREARHKWGDRLNIIDWEHEESSFTTDFCT
                     PGYLAWYIRADGYVTPCQLEDLPLGHILEDSMADIGSPARLLQLKCEAKNCKCIGKIE
                     LSEPDLPFQKEVKAGIQE"
     misc_feature    214505..215095
                     /gene="skfB"
                     /locus_tag="BSU01920"
                     /note="Radical SAM superfamily. Enzymes of this family
                     generate radicals by combining a 4Fe-4S cluster and
                     S-adenosylmethionine (SAM) in close proximity. They are
                     characterized by a conserved CxxxCxxC motif, which
                     coordinates the conserved iron-sulfur cluster; Region:
                     Radical_SAM; cd01335"
                     /db_xref="CDD:100105"
     misc_feature    214505..214969
                     /gene="skfB"
                     /locus_tag="BSU01920"
                     /note="Radical SAM superfamily; Region: Radical_SAM;
                     pfam04055"
                     /db_xref="CDD:252342"
     misc_feature    order(214523..214525,214529..214531,214535..214537,
                     214541..214549,214649..214651,214655..214660,
                     214730..214738,214805..214807,214925..214927,
                     215021..215026)
                     /gene="skfB"
                     /locus_tag="BSU01920"
                     /note="FeS/SAM binding site; other site"
                     /db_xref="CDD:100105"
     gene            215404..216894
                     /gene="skfC"
                     /locus_tag="BSU01935"
                     /db_xref="GeneID:8302931"
     CDS             215404..216894
                     /gene="skfC"
                     /locus_tag="BSU01935"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15812018, 15849754,
                     16816204, 16850406, 17069462, 17184776; Product type t :
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="sporulation-killing factor biosynthesis protein
                     SkfC"
                     /protein_id="YP_003097671.1"
                     /db_xref="GI:255767051"
                     /db_xref="GeneID:8302931"
                     /translation="MNSLSLVFWSILAVVGLLLFIKFKPPTIASLLLSKDEAKEISIQ
                     FIKEFVGIDVENWDFYSVYWYDHDTVNKLHHLGILKKNRKVLYDVGLVESWRVRFVHQ
                     NQSFVVGVNANREITFFYADVPKKTLSGKFEQVSPETLKQRLMASPDGLWSRANMTGT
                     GKKEEDFREVSTYWYIAEAGDIRLKVTVELQGGRISYIGTEQEILTDQMSKVIRDEQV
                     ESTFGVSGMLGSALAMILAILILVFMDVQTSIIFSLVLGLLIIICQSLTLKEDIQLTI
                     VNAYDARMSVKTVSLLGILSTLLTGLLTGFVVFICSLAGNALAGDFGWKTFEQPIVQI
                     FYGIGAGLISLGVTSLLFNLLEKKQYLRISPELSNRTVFLSGFTFRQGLNMSIQSSIG
                     EEVIYRLLMIPVIWWMSGNILISIIVSSFLWAVMHQVTGYDPRWIRWLHLFIFGCFLG
                     VLFIKFGFICVLVAHFIHNLVLVCMPLWQFKLQKHMHHDQPKHTSL"
     misc_feature    216544..216816
                     /gene="skfC"
                     /locus_tag="BSU01935"
                     /note="CAAX protease self-immunity; Region: Abi;
                     pfam02517"
                     /db_xref="CDD:251346"
     gene            216913..217632
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /db_xref="GeneID:938498"
     CDS             216913..217632
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="SkfA peptide export ATP-binding protein SkfE"
                     /protein_id="NP_388077.1"
                     /db_xref="GI:16077264"
                     /db_xref="GeneID:938498"
                     /translation="MQLMQVQNLSKCYRNGDGVEHLSFSIQRGEIVALLGPNGAGKTT
                     TIRCLTGLYKPDKGDILIEGSPPGDINVQKKVALIPDQPYLYPALTAAEHIQFRARGY
                     HPGKKDVKERVYHALKEVHLEEKANQLCGQLSRGQKQRVVLAGAIVQDALLYILDEPT
                     VGLDIPSKQWLSNWLKTKTDQGCSAFVSTHSLEFVIETADRVILIRDGKLMQDLYVPQ
                     FEEQAEWRKEVIRLLGEWSDE"
     misc_feature    216913..217551
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /note="ABC-type cobalt transport system, ATPase component
                     [Inorganic ion transport and metabolism]; Region: CbiO;
                     COG1122"
                     /db_xref="CDD:224047"
     misc_feature    216925..217542
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /note="ATP-binding cassette domain of the drug resistance
                     transporter and related proteins, subfamily A; Region:
                     ABC_DR_subfamily_A; cd03230"
                     /db_xref="CDD:213197"
     misc_feature    217018..217041
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /note="Walker A/P-loop; other site"
                     /db_xref="CDD:213197"
     misc_feature    order(217027..217032,217036..217044,217153..217155,
                     217381..217386,217480..217482)
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:213197"
     misc_feature    217144..217155
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /note="Q-loop/lid; other site"
                     /db_xref="CDD:213197"
     misc_feature    217309..217338
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /note="ABC transporter signature motif; other site"
                     /db_xref="CDD:213197"
     misc_feature    217369..217386
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /note="Walker B; other site"
                     /db_xref="CDD:213197"
     misc_feature    217393..217404
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /note="D-loop; other site"
                     /db_xref="CDD:213197"
     misc_feature    217468..217488
                     /gene="skfE"
                     /locus_tag="BSU01950"
                     /note="H-loop/switch region; other site"
                     /db_xref="CDD:213197"
     gene            217697..219040
                     /gene="skfF"
                     /locus_tag="BSU01960"
                     /db_xref="GeneID:938494"
     CDS             217697..219040
                     /gene="skfF"
                     /locus_tag="BSU01960"
                     /function="16.1: Circulate"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15812018, 15849754,
                     16816204, 16850406, 17069462, 17184776; Product type t :
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin-SkfA transport system permease SkfF"
                     /protein_id="NP_388078.2"
                     /db_xref="GI:255767052"
                     /db_xref="GeneID:938494"
                     /translation="MPFLIMLLFVGAIGFQVSFVSRSTTWDMSIAGWVLTGVFILYTA
                     FGLFSNRLPSQMADIIWLYGTATSFSKVVYSVLFFSVTWKALLWIISAIFGDVLIVLL
                     SGDHINLLGRSIIFVGLFFIAEVWLMSVSCARTVKKMKRVYVLVFLLMLGIYSICLYR
                     FFFLQHSSGIWESIARFISGVGLVFDTLSPLYVVVFIGIITVSFMTIAFTSRQVEMKE
                     SLVKEAEFWEEFQERQFGSGQIIQKPKTTWWGLQGLNGIWSFLWLELLLFKKYLFFHS
                     IHTVMLSGVFYVVIFMYPEWFYLLFFLIVSAVMLSSYYSGIVRHSQSGTLHLFPGALW
                     KKIIILELTNTVWLYILYCVSITFMAVGNLVYWYIYGLGIYIWFMTIRLFAFTHTNRN
                     DIKLSLPQYYKSFFMALGLSGICLYVIHLLTADWYTLVVVVCIGSLSWCLFYRFR"
     gene            219087..219602
                     /gene="skfG"
                     /locus_tag="BSU01970"
                     /db_xref="GeneID:938502"
     CDS             219087..219602
                     /gene="skfG"
                     /locus_tag="BSU01970"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15812018, 16816204,
                     17069462, 17184776; Product type ph: phenotype"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388079.2"
                     /db_xref="GI:255767053"
                     /db_xref="GeneID:938502"
                     /translation="MNSNGDKLSLSVQNLANTNEITIVQAIGELKKSGKDAIPVLVEA
                     LKEEGSLCNIAAAVLGEFGEDASEAAEELSCLLKSHAEDTRMAAAISLMRIGKPSLPF
                     VIKIAQESEGQSCFWASWCIAWIDPSCIEPKMYKCLKYEHEHPSGIVAPFAAEEALGK
                     LIAFQLKDKED"
     misc_feature    219198..219443
                     /gene="skfG"
                     /locus_tag="BSU01970"
                     /note="HEAT repeats; Region: HEAT_2; pfam13646"
                     /db_xref="CDD:257956"
     gene            219607..220032
                     /gene="skfH"
                     /locus_tag="BSU01980"
                     /db_xref="GeneID:938499"
     CDS             219607..220032
                     /gene="skfH"
                     /locus_tag="BSU01980"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15812018, 16816204,
                     17069462, 17184776; Product type ph: phenotype"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="NP_388080.2"
                     /db_xref="GI:255767054"
                     /db_xref="GeneID:938499"
                     /translation="MKDEQMLTEWPSHLPWLNQSQNDFTFPSDTYLLLYFWSMSCPNC
                     HQLTDKVLQDIKDMNVKVIGVHVPYIEEEKSMEVVLTYALDRGLAIPIVLDQNYEIVT
                     TCHVQGIPSFCLLSQYGQIITKTMGDVGWDKMLKKIAGL"
     misc_feature    219697..219987
                     /gene="skfH"
                     /locus_tag="BSU01980"
                     /note="TlpA-like family; composed of  TlpA, ResA, DsbE and
                     similar proteins. TlpA, ResA and DsbE are bacterial
                     protein disulfide reductases with important roles in
                     cytochrome maturation. They are membrane-anchored proteins
                     with a soluble TRX domain containing a...; Region:
                     TlpA_like_family; cd02966"
                     /db_xref="CDD:239264"
     misc_feature    order(219727..219729,219736..219738)
                     /gene="skfH"
                     /locus_tag="BSU01980"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239264"
     gene            220279..221256
                     /gene="ybdG"
                     /locus_tag="BSU01990"
                     /db_xref="GeneID:938500"
     CDS             220279..221256
                     /gene="ybdG"
                     /locus_tag="BSU01990"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388081.2"
                     /db_xref="GI:255767055"
                     /db_xref="GeneID:938500"
                     /translation="MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGK
                     GTVVDVDGKKMNVYQEGSGKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAG
                     YGYSEVSHDDRDIDTVLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKA
                     IIAMDIGLPQQYVTYKLSGVDRLKVRGFHLLTSIGFHRFIPSAVYNPEVIRQSFLTDE
                     EKEIYKAINFKQFFNADMEHELLQSYQNGSKSVNLPAPKETPVLILDAVSDQNRHSKY
                     AIQNRKDYEAFAAQFNTADIKELRGTHSIYLYQPDQIYKLSMEFMRKVR"
     misc_feature    220477..221226
                     /gene="ybdG"
                     /locus_tag="BSU01990"
                     /note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
                     pfam12697"
                     /db_xref="CDD:257231"
     gene            221258..221929
                     /gene="ybdJ"
                     /locus_tag="BSU02000"
                     /db_xref="GeneID:938485"
     CDS             221258..221929
                     /gene="ybdJ"
                     /locus_tag="BSU02000"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11717295; Product type r:
                     regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="NP_388082.1"
                     /db_xref="GI:16077269"
                     /db_xref="GeneID:938485"
                     /translation="MKGYRILIVEDDVMIGDLLQKILQREGYRVIWKTDGADVLSVIQ
                     KVDLVIMDVMLPGEDGYQMSAKIKKLGLGIPVIFLSARNDMDSKLQGLQIGEDYMVKP
                     FDPRELLLRMRNMLEHHYGTFTQIKHLYIDAVTKKVFNESLHDEVLFTAIERKIFFYL
                     YENRDSILTKEHFFEYLWQLEDRNPNIVNVHIKKIRAKINDQAGEMIENIYGEGYRLN
                     TVVKK"
     misc_feature    221267..221914
                     /gene="ybdJ"
                     /locus_tag="BSU02000"
                     /note="Response regulators consisting of a CheY-like
                     receiver domain and a winged-helix DNA-binding domain
                     [Signal transduction mechanisms / Transcription]; Region:
                     OmpR; COG0745"
                     /db_xref="CDD:223816"
     misc_feature    221276..221605
                     /gene="ybdJ"
                     /locus_tag="BSU02000"
                     /note="Signal receiver domain; originally thought to be
                     unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
                     recently identified in eukaroytes ETR1 Arabidopsis
                     thaliana; this domain receives the signal from the sensor
                     partner in a two-component systems; Region: REC; cd00156"
                     /db_xref="CDD:238088"
     misc_feature    order(221285..221290,221411..221413,221435..221437,
                     221495..221497,221549..221551,221558..221563)
                     /gene="ybdJ"
                     /locus_tag="BSU02000"
                     /note="active site"
                     /db_xref="CDD:238088"
     misc_feature    221411..221413
                     /gene="ybdJ"
                     /locus_tag="BSU02000"
                     /note="phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238088"
     misc_feature    order(221420..221425,221429..221437)
                     /gene="ybdJ"
                     /locus_tag="BSU02000"
                     /note="intermolecular recognition site; other site"
                     /db_xref="CDD:238088"
     misc_feature    221558..221566
                     /gene="ybdJ"
                     /locus_tag="BSU02000"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238088"
     misc_feature    221693..221908
                     /gene="ybdJ"
                     /locus_tag="BSU02000"
                     /note="Transcriptional regulatory protein, C terminal;
                     Region: Trans_reg_C; smart00862"
                     /db_xref="CDD:214866"
     misc_feature    order(221705..221707,221762..221767,221816..221818,
                     221825..221827,221849..221854,221882..221884,
                     221897..221899)
                     /gene="ybdJ"
                     /locus_tag="BSU02000"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238225"
     gene            221950..222912
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /db_xref="GeneID:938496"
     CDS             221950..222912
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /function="16.12: Sense"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11717295; Product type
                     rc: receptor"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="NP_388083.1"
                     /db_xref="GI:16077270"
                     /db_xref="GeneID:938496"
                     /translation="MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAY
                     PAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIG
                     ELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINTPLTALRLQLFYLEDQCHG
                     QAVFESLYQQIEYISELTNEFNLYSAETLESSYIVNEEVRLNELLETAVKKWDYLYSM
                     SGIELHYKPADQDVIWMSNTLWMERLFDNIFQNTLRHSKAKKMEVTIEHGDVFIRDDG
                     IGFDRNESSEGLGLKIIEDTCRLLAITYELHTNDNGTGFLFSKE"
     misc_feature    222034..222903
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; Region: BaeS; COG0642"
                     /db_xref="CDD:223715"
     misc_feature    222154..222291
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /note="Histidine kinase, Adenylyl cyclase,
                     Methyl-accepting protein, and Phosphatase (HAMP) domain.
                     HAMP is a signaling domain which occurs in a wide variety
                     of signaling proteins, many of which are bacterial. The
                     HAMP domain consists of two alpha helices...; Region:
                     HAMP; cd06225"
                     /db_xref="CDD:100122"
     misc_feature    order(222154..222159,222166..222171,222175..222180,
                     222187..222192,222196..222198,222247..222252,
                     222256..222261,222268..222273,222277..222282,
                     222289..222291)
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:100122"
     misc_feature    222325..222504
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /note="Histidine Kinase A (dimerization/phosphoacceptor)
                     domain; Histidine Kinase A dimers are formed through
                     parallel association of 2 domains creating 4-helix
                     bundles; usually these domains contain a conserved His
                     residue and are activated via...; Region: HisKA; cd00082"
                     /db_xref="CDD:119399"
     misc_feature    order(222343..222345,222355..222357,222367..222369,
                     222376..222378,222388..222390,222397..222399,
                     222436..222438,222448..222450,222457..222459,
                     222469..222471,222478..222480,222490..222492)
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:119399"
     misc_feature    222361..222363
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /note="phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:119399"
     misc_feature    222670..222903
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /note="Histidine kinase-like ATPases; This family includes
                     several ATP-binding proteins for example: histidine
                     kinase, DNA gyrase B, topoisomerases, heat shock protein
                     HSP90, phytochrome-like ATPases and DNA mismatch repair
                     proteins; Region: HATPase_c; cd00075"
                     /db_xref="CDD:238030"
     misc_feature    order(222688..222690,222700..222702,222709..222711,
                     222763..222765,222769..222771,222775..222777,
                     222781..222786,222808..222819,222865..222867,
                     222871..222873,222883..222888,222892..222894)
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:238030"
     misc_feature    222700..222702
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /note="Mg2+ binding site [ion binding]; other site"
                     /db_xref="CDD:238030"
     misc_feature    order(222775..222777,222781..222783,222808..222810,
                     222814..222816)
                     /gene="ybdK"
                     /locus_tag="BSU02010"
                     /note="G-X-G motif; other site"
                     /db_xref="CDD:238030"
     gene            222971..223234
                     /gene="ybzI"
                     /locus_tag="BSU02019"
                     /db_xref="GeneID:8303143"
     CDS             222971..223234
                     /gene="ybzI"
                     /locus_tag="BSU02019"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 5: No homology to any previously reported
                     sequences"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003097672.1"
                     /db_xref="GI:255767056"
                     /db_xref="GeneID:8303143"
                     /translation="MNIICLKKSSKRLSTSQAVLVTDIADTGITAAAGADIIAATAAV
                     RAKEDTTTVMAAVIVTNAGATAAVNPKKVLVPLLGQGFFYVTD"
     gene            complement(223219..223989)
                     /gene="ybdM"
                     /locus_tag="BSU02030"
                     /db_xref="GeneID:938464"
     CDS             complement(223219..223989)
                     /gene="ybdM"
                     /locus_tag="BSU02030"
                     /EC_number="2.7.11.-"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="NP_388085.1"
                     /db_xref="GI:16077272"
                     /db_xref="GeneID:938464"
                     /translation="MALKLLKKLLFDRPLKNGVILNHQYKIEECLGMGGYGLVYLCTD
                     ILAQTPYVLKQLRPTKAKKEKEKVRFQQEIKLLKNIHHPQIPGFIDEFIIDGQAYYVM
                     QFIEGENIEELLFFRKQPFTELMALQLISQLLEIIEYLHDRLIFHSDIRTPNIIINDG
                     RLCLIDFGLAKQLTPEEMEEIKVRKQDDFFDLGETLLFLLYSQYKGKKKKNGTWLEEL
                     TLTKEVTLLLKRLLGIEEEYQHTASIREDLNRAIQSVT"
     misc_feature    complement(<223456..223917)
                     /gene="ybdM"
                     /locus_tag="BSU02030"
                     /note="Serine/Threonine protein kinases, catalytic domain;
                     Region: S_TKc; smart00220"
                     /db_xref="CDD:214567"
     misc_feature    complement(<223453..223899)
                     /gene="ybdM"
                     /locus_tag="BSU02030"
                     /note="Catalytic domain of Protein Kinases; Region: PKc;
                     cd00180"
                     /db_xref="CDD:173623"
     misc_feature    complement(order(223483..223485,223492..223494,
                     223522..223524,223528..223533,223537..223539,
                     223543..223545,223657..223659,223663..223665,
                     223675..223686,223732..223734,223828..223830,
                     223834..223836,223873..223875,223885..223899))
                     /gene="ybdM"
                     /locus_tag="BSU02030"
                     /note="active site"
                     /db_xref="CDD:173623"
     misc_feature    complement(order(223492..223494,223522..223524,
                     223528..223533,223537..223539,223543..223545,
                     223663..223665,223675..223686,223732..223734,
                     223828..223830,223834..223836,223873..223875,
                     223885..223899))
                     /gene="ybdM"
                     /locus_tag="BSU02030"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:173623"
     misc_feature    complement(order(223483..223485,223531..223533,
                     223537..223539,223543..223545,223657..223659,
                     223663..223665,223885..223887))
                     /gene="ybdM"
                     /locus_tag="BSU02030"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:173623"
     misc_feature    complement(223477..223497)
                     /gene="ybdM"
                     /locus_tag="BSU02030"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:173623"
     gene            complement(224075..224932)
                     /gene="ybdN"
                     /locus_tag="BSU02040"
                     /db_xref="GeneID:938489"
     CDS             complement(224075..224932)
                     /gene="ybdN"
                     /locus_tag="BSU02040"
                     /function="16.5: Explore"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 16794953; Product type h :
                     extrachromosomal origin"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388086.1"
                     /db_xref="GI:16077273"
                     /db_xref="GeneID:938489"
                     /translation="MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIG
                     YWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQ
                     GTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQ
                     FSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHL
                     IMTSENNEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKID
                     YEYDVTKQF"
     gene            225064..226248
                     /gene="ybdO"
                     /locus_tag="BSU02050"
                     /db_xref="GeneID:938493"
     CDS             225064..226248
                     /gene="ybdO"
                     /locus_tag="BSU02050"
                     /function="16.5: Explore"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15033535; Product type h :
                     extrachromosomal origin"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388087.1"
                     /db_xref="GI:16077274"
                     /db_xref="GeneID:938493"
                     /translation="MRLNRQFIRTQLIAQNILSKNAPAKRENATENPAAVLEKAYSRL
                     KSQSSTGGINQFNYSKTSVSGNSGTFSKVYQSANDRTVTDTGEETVIQSQNPYESESD
                     IRIKILDEKYSRMNAINKTKSDPLGYIKDKYQNSKSPYFRSDLSAAERQAAYDNETEW
                     LFKGKAQNYNLQDAVFRNVTFHGEVEAENEKVYQRGQVNQQLQVLLNRNHIHIPEGTE
                     LTFTITPIDYQVRVSGTDDQDLIKQIEQVLQSGDNSKELFLHIMKSQSSDSAQFSEEA
                     YKKYQAAREMYEVTGYHLKDLEVIDGRYVTPEGRDLMDVYKEELEKDPVQKQTASYAI
                     SYYRSELSKIAEAGYNAIPDFILSIDYSNGSLRDVGQSKSYGTGDTGWLEALKRQTGV
                     NY"
     gene            226566..227954
                     /gene="ybxG"
                     /locus_tag="BSU02060"
                     /db_xref="GeneID:938470"
     CDS             226566..227954
                     /gene="ybxG"
                     /locus_tag="BSU02060"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="NP_388088.1"
                     /db_xref="GI:16077275"
                     /db_xref="GeneID:938470"
                     /translation="MANKELKRGLGARHIQMIALGGTIGVGLFMGSASTISWTGPSVL
                     LAYAICGIFIFFIMRAMGEMLYVEPSTGSFATFGHQYIHPMAGYITAWSNWFQWIIVG
                     MSEIIAVGSYTKYWFPDLPAWIPGIVAMVILGAANLISVKSFGEFEFWFAMIKIVTII
                     LMIIAGIGIIFFGFGNGGDAIGLSNLWSHGGFFAGGFSGFFFALSLVIAAYQGVELIG
                     ITAGEAKDPQNTLRNAIQSIIWRILIFYIGAIFVIVTVYPWDELNSLGSPFVSTFSKI
                     GITAAAGIINFVVITAAMSGCNSGIFSAGRMLYTLGVNGQAPKFFKKISRNGVPLYGT
                     IAVLIGLAVGVVLNYIAPPKIFVYVYSASVLPGMIPWFIILISHIGFRKAKGAALDKH
                     PFKMPFAPFTNYLTIAFLLMVLVGMWFNDDTRISLIVGVIFLALVVISYYVFGIGKRT
                     QANLTKSEQAAE"
     misc_feature    226572..227921
                     /gene="ybxG"
                     /locus_tag="BSU02060"
                     /note="Gamma-aminobutyrate permease and related permeases
                     [Amino acid transport and metabolism]; Region: AnsP;
                     COG1113"
                     /db_xref="CDD:224038"
     gene            228066..228314
                     /gene="csgA"
                     /locus_tag="BSU02070"
                     /db_xref="GeneID:938448"
     CDS             228066..228314
                     /gene="csgA"
                     /locus_tag="BSU02070"
                     /function="16.5: Explore"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 9016963; Product type cp:
                     cell process"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-G-dependent sporulation-specific SASP
                     protein"
                     /protein_id="NP_388089.1"
                     /db_xref="GI:16077276"
                     /db_xref="GeneID:938448"
                     /translation="MDVTLGYLRESLSNHLENEVCQRICKKMLAKRYANEEEFVKDLD
                     DNEMSFLNHVLEKEIKYAQNEQDQKRAKELNEVYELLL"
     gene            228331..228522
                     /gene="ybxH"
                     /locus_tag="BSU02080"
                     /db_xref="GeneID:938445"
     CDS             228331..228522
                     /gene="ybxH"
                     /locus_tag="BSU02080"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388090.1"
                     /db_xref="GI:16077277"
                     /db_xref="GeneID:938445"
                     /translation="MGAIERSGYTFQPEFSVVRQNGAIHVYHQGEFVEEIEFEFNGEY
                     PDHDLIEELVNHYCFEHEI"
     gene            complement(228549..229352)
                     /gene="ybxI"
                     /locus_tag="BSU02090"
                     /db_xref="GeneID:938466"
     CDS             complement(228549..229352)
                     /gene="ybxI"
                     /locus_tag="BSU02090"
                     /EC_number="3.5.2.6"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 14742199; Product type e:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase YbxI"
                     /protein_id="NP_388091.1"
                     /db_xref="GI:16077278"
                     /db_xref="GeneID:938466"
                     /translation="MKKWIYVVLVLSIAGIGGFSVHAASSAHEKHLNVSKMNVDDEFK
                     DTDGTFILHDLQKDQTFVYNRKRANQRQTPQSTFKVVNALIGLQVKAVRDEYDVKRWD
                     GVKREFESWNRDHTLGSAMRESAIWYYQALARDIGEERMKTWLHTLSYGNEDISGGID
                     QFWLQSSLTISPLEQETFLEKLAKEELPFDKPVMKIVKRMMIQEEGDHYTLYGKTGTR
                     LTDMGLGWFVGFIKTEHGSYVFVTNVDDSGTKAKNITVDILKKYGLITS"
     misc_feature    complement(228552..229298)
                     /gene="ybxI"
                     /locus_tag="BSU02090"
                     /note="Beta-lactamase class D [Defense mechanisms];
                     Region: COG2602"
                     /db_xref="CDD:225322"
     gene            229525..230778
                     /gene="cypC"
                     /locus_tag="BSU02100"
                     /db_xref="GeneID:938449"
     CDS             229525..230778
                     /gene="cypC"
                     /locus_tag="BSU02100"
                     /EC_number="1.14.-.-"
                     /function="16.6: Maintain"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10529095; Product type e:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty-acid peroxygenase"
                     /protein_id="NP_388092.1"
                     /db_xref="GI:16077279"
                     /db_xref="GeneID:938449"
                     /translation="MNEQIPHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGK
                     NFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSL
                     MTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVK
                     ERADDFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMA
                     FHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRSGNSRER
                     EMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEF
                     RPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQS
                     LHYSLARMPSLPESGFVMSGIRRKS"
     misc_feature    229534..230775
                     /gene="cypC"
                     /locus_tag="BSU02100"
                     /note="Cytochrome P450 [Secondary metabolites
                     biosynthesis, transport, and catabolism]; Region: CypX;
                     COG2124"
                     /db_xref="CDD:225035"
     gene            complement(230819..231079)
                     /gene="ybyB"
                     /locus_tag="BSU02110"
                     /db_xref="GeneID:938450"
     CDS             complement(230819..231079)
                     /gene="ybyB"
                     /locus_tag="BSU02110"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388093.1"
                     /db_xref="GI:16077280"
                     /db_xref="GeneID:938450"
                     /translation="MKQKLLLSGLAVSTVGITSYLLKDPSNRQKAREFIHSMKMKITK
                     QPDMETFPVDKAGHPDPQDIEDNKMVSEGSMYPVQYYDEKKK"
     gene            231348..232967
                     /gene="ybeC"
                     /locus_tag="BSU02120"
                     /db_xref="GeneID:938442"
     CDS             231348..232967
                     /gene="ybeC"
                     /locus_tag="BSU02120"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid-proton symporter YbeC"
                     /protein_id="NP_388094.2"
                     /db_xref="GI:255767057"
                     /db_xref="GeneID:938442"
                     /translation="MNQLHRRMGTFSLMMVGLGSMIGSGWLFGAWRAAQIAGPAAIIS
                     WVIGMVVILFIALSYSELGSMFPEAGGMVKYTQYSHGSFIGFIAGWANWIAIVSVIPV
                     EAVASVQYMSSWPWEWAKWTSGLVKNGTLTGEGLAFASVLLLIYFLLNYWTVNLFSKA
                     NSLITIFKIIIPGLTIGALLFVGFHGENFTGGQSIAPNGWASVLTAVATSGIVFAFNG
                     FQSPINMAGEAKNPGKSIPIAVVGSLFVATVIYVLLQIAFIGAVNPSDIAHGWSHLNF
                     NSPFADLAIALNINWLVIVLYADAFVSPSGTGITYTATTSRMIYGMEKNKYMPSIFGK
                     LHPIYGVPRQAMFFNLIVSFIFLFLFRGWGVLAEIISVATLISYITGPITVMTLRRTG
                     KDLYRPLRLKGLNVIAPLGFIFASLVLYWARWPLTGQVLFIILIGLPIYFYYQAKAKW
                     KGFGRNFKAGVWMVFYLLAMMVISYLGSDKFGGLNVIHYGWDMVLIAMVSLVFYVWAL
                     KSGYQTEYLKDAKEINSQLLNGQSEAAAGKE"
     misc_feature    231348..232679
                     /gene="ybeC"
                     /locus_tag="BSU02120"
                     /note="Amino acid transporters [Amino acid transport and
                     metabolism]; Region: PotE; COG0531"
                     /db_xref="CDD:223605"
     misc_feature    231357..232517
                     /gene="ybeC"
                     /locus_tag="BSU02120"
                     /note="Transmembrane amino acid transporter protein;
                     Region: Aa_trans; cl17468"
                     /db_xref="CDD:266708"
     gene            complement(233014..233895)
                     /gene="glpQ"
                     /locus_tag="BSU02130"
                     /db_xref="GeneID:938446"
     CDS             complement(233014..233895)
                     /gene="glpQ"
                     /locus_tag="BSU02130"
                     /EC_number="3.1.4.46"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10913081; Product type e:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase"
                     /protein_id="NP_388095.1"
                     /db_xref="GI:16077282"
                     /db_xref="GeneID:938446"
                     /translation="MRKNRILALFVLSLGLLSFMVTPVSAASKGNLLSPDRILTVAHR
                     GASGYVPEHTILSYETAQKMKADFIELDLQMTKDGKLIVMHDEKLDRTTNGMGWVKDH
                     TLADIKKLDAGSWFNEAYPEKAKPQYVGLKVPTLEEVLDRFGKHANYYIETKSPDTYP
                     GMEEKLIASLQKHKLLGKHSKPGQVIIQSFSKESLVKVHQLQPNLPTVQLLEAKQMAS
                     MTDAALEEIKTYAVGAGPDYKALNQENVRMIRSHGLLLHPYTVNNEADMHRLLDWGVT
                     GVFTNYPDLFHKVKKGY"
     misc_feature    complement(233023..233784)
                     /gene="glpQ"
                     /locus_tag="BSU02130"
                     /note="Glycerophosphodiester phosphodiesterase domain of
                     Staphylococcus aureus and similar proteins; Region:
                     GDPD_SaGlpQ_like; cd08601"
                     /db_xref="CDD:176543"
     misc_feature    complement(233041..233769)
                     /gene="glpQ"
                     /locus_tag="BSU02130"
                     /note="Glycerophosphoryl diester phosphodiesterase family;
                     Region: GDPD; pfam03009"
                     /db_xref="CDD:251672"
     misc_feature    complement(order(233119..233121,233332..233334,
                     233440..233442,233641..233643,233680..233682,
                     233686..233688,233767..233769))
                     /gene="glpQ"
                     /locus_tag="BSU02130"
                     /note="active site"
                     /db_xref="CDD:176543"
     misc_feature    complement(order(233641..233643,233767..233769))
                     /gene="glpQ"
                     /locus_tag="BSU02130"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176543"
     misc_feature    complement(order(233440..233442,233680..233682,
                     233686..233688))
                     /gene="glpQ"
                     /locus_tag="BSU02130"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:176543"
     gene            complement(233994..235328)
                     /gene="glpT"
                     /locus_tag="BSU02140"
                     /db_xref="GeneID:938447"
     CDS             complement(233994..235328)
                     /gene="glpT"
                     /locus_tag="BSU02140"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11929549, 15849754,
                     16850406, 8012593; Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="NP_388096.1"
                     /db_xref="GI:16077283"
                     /db_xref="GeneID:938447"
                     /translation="MLNIFKPAPHIERLDDSKMDAAYKRLRLQVFIGIFIGYAGYYLL
                     RKNFAFAIPYLQEQGFSKTELGLVLAAVSIAYGFSKFIMGMVSDRCNPRYFLATGLFL
                     SAIVNILFVSMPWVTSSVTIMFIFMFINGWFQGMGWPPCGRTMAHWFSISERGTKMSI
                     WNVAHNIGGGILAPLVTLGIAMFVTWKSVFFFPAIIAIIISFLIVLLVRDTPQSCGLP
                     PIEEYRNDYPKHAFKNQEKELTTKEILFQYVLNNKFLWYIAFANVFVYFVRYGVVDWA
                     PTYLTEAKGFSPEDSRWSYFLYEYAGIPGTILCGWISDRFFKSRRAPAGVLFMAGVFI
                     AVLVYWLNPAGNPLVDNIALISIGFLIYGPVMLIGLQAIDLAPKKAAGTAAGLTGFFG
                     YIGGSAFANAIMGFVVDRFNWNGGFIMLISSCILAIVFLALTWNTGKRAEHV"
     misc_feature    complement(234009..235322)
                     /gene="glpT"
                     /locus_tag="BSU02140"
                     /note="glycerol-3-phosphate transporter; Region: glpT;
                     TIGR00712"
                     /db_xref="CDD:129795"
     misc_feature    complement(234024..235238)
                     /gene="glpT"
                     /locus_tag="BSU02140"
                     /note="The Major Facilitator Superfamily (MFS) is a large
                     and diverse group of secondary transporters that includes
                     uniporters, symporters, and antiporters. MFS proteins
                     facilitate the transport across cytoplasmic or internal
                     membranes of a variety of...; Region: MFS; cd06174"
                     /db_xref="CDD:119392"
     misc_feature    complement(order(234141..234143,234150..234155,
                     234162..234167,234174..234179,234210..234212,
                     234219..234224,234234..234236,234243..234248,
                     234255..234257,234411..234413,234423..234425,
                     234432..234434,234444..234446,234456..234458,
                     234498..234500,234507..234512,234519..234524,
                     234531..234533,234819..234821,234840..234845,
                     234852..234857,234891..234893,234900..234905,
                     234912..234917,234924..234929,235077..235082,
                     235086..235091,235101..235103,235110..235115,
                     235122..235124,235170..235175,235179..235187,
                     235194..235196))
                     /gene="glpT"
                     /locus_tag="BSU02140"
                     /note="putative substrate translocation pore; other site"
                     /db_xref="CDD:119392"
     gene            235625..235873
                     /gene="ybeF"
                     /locus_tag="BSU02150"
                     /db_xref="GeneID:938444"
     CDS             235625..235873
                     /gene="ybeF"
                     /locus_tag="BSU02150"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388097.1"
                     /db_xref="GI:16077284"
                     /db_xref="GeneID:938444"
                     /translation="MDELDIAFFILPLGIMLLSIVGTCICKNPYLMPMLSLVISLVLT
                     FTIFNQSFLGWAVVYSLVSLALSYITLIVVRKRKESGN"
     misc_feature    235625..235861
                     /gene="ybeF"
                     /locus_tag="BSU02150"
                     /note="Protein of unknown function (DUF2651); Region:
                     DUF2651; pfam10852"
                     /db_xref="CDD:256181"
     gene            235965..236882
                     /gene="ybfA"
                     /locus_tag="BSU02160"
                     /db_xref="GeneID:938439"
     CDS             235965..236882
                     /gene="ybfA"
                     /locus_tag="BSU02160"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="NP_388098.1"
                     /db_xref="GI:16077285"
                     /db_xref="GeneID:938439"
                     /translation="MKTRESSVGLKFRKFNRFYTNVLGFLNEHIYDSPFSLTETRILF
                     EIYNTPNCTAKALQDKLGLDRGYVSRIVKQFEKEDLIYKQRSKDDARHHYIFVTETGK
                     TIYKKLEEKANEQVELMLKVINQKEQHKLAEAMAEIEAILSQSLSARASEISIRDYFL
                     SEDLQLLIEKQRQFYAEAHGWDDTFLAYLQETFDADIEKIWIAESGGKFAGSVGLVKH
                     DEKTVQLRWFLVDADFRGRGLGTQLLEHLVAYCQDMKFDRIFLWTVSTMAEARPLYKK
                     FGFRISEVKQEAPLWGQQLTEERWDLELS"
     misc_feature    236067..236375
                     /gene="ybfA"
                     /locus_tag="BSU02160"
                     /note="Transcriptional regulators [Transcription]; Region:
                     MarR; COG1846"
                     /db_xref="CDD:224759"
     misc_feature    236067..236243
                     /gene="ybfA"
                     /locus_tag="BSU02160"
                     /note="MarR family; Region: MarR; pfam01047"
                     /db_xref="CDD:250321"
     misc_feature    236466..236801
                     /gene="ybfA"
                     /locus_tag="BSU02160"
                     /note="Acetyltransferase (GNAT) domain; Region:
                     Acetyltransf_10; pfam13673"
                     /db_xref="CDD:257979"
     misc_feature    236562..236750
                     /gene="ybfA"
                     /locus_tag="BSU02160"
                     /note="N-Acyltransferase superfamily: Various enzymes that
                     characteristically catalyze the transfer of an acyl group
                     to a substrate; Region: NAT_SF; cd04301"
                     /db_xref="CDD:173926"
     misc_feature    order(236646..236654,236682..236687)
                     /gene="ybfA"
                     /locus_tag="BSU02160"
                     /note="Coenzyme A binding pocket [chemical binding]; other
                     site"
                     /db_xref="CDD:173926"
     gene            236879..238129
                     /gene="ybfB"
                     /locus_tag="BSU02170"
                     /db_xref="GeneID:938436"
     CDS             236879..238129
                     /gene="ybfB"
                     /locus_tag="BSU02170"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="NP_388099.1"
                     /db_xref="GI:16077286"
                     /db_xref="GeneID:938436"
                     /translation="MKRLHYAWIIVSVTFLILLAVQGVRLSFGAFVEPWERQFSIDRS
                     TISLISTVSFIVYGISQPVIGRLVDKWGARAVLAWSALLTGVSIFLTYLVTSPWQLFL
                     LYGLGVSLGVGGASNVAASVLVVNWFSKKRGLAFGIMEAGFGAGQMLLVPGSLMLIHW
                     FSWKLTVVVLGLLLIVIVFPAALLMLRNNPSEKNTEPIGGLAASEKETAPKTTALSVA
                     GMFRMRQFWFLIFPFLICGFTTVGLMDTHLIPFSHDHGFSTTVTSAAVSLLAGFNIAG
                     ILLSGIVADRWSSRKILCILYAVRALSIVILIYSHEPYLLLAFAILFGLVDFATVAPT
                     QMLATQYFQNYSIGLMIGWLSLAHQIGSALGAYVPGVIYTVTGEYTLAFYLSIGMLVL
                     ASVMNVMLREPAAVTRDSAAVVDK"
     misc_feature    236909..238066
                     /gene="ybfB"
                     /locus_tag="BSU02170"
                     /note="The Major Facilitator Superfamily (MFS) is a large
                     and diverse group of secondary transporters that includes
                     uniporters, symporters, and antiporters. MFS proteins
                     facilitate the transport across cytoplasmic or internal
                     membranes of a variety of...; Region: MFS; cd06174"
                     /db_xref="CDD:119392"
     misc_feature    236915..237976
                     /gene="ybfB"
                     /locus_tag="BSU02170"
                     /note="Major Facilitator Superfamily; Region: MFS_1;
                     pfam07690"
                     /db_xref="CDD:254360"
     misc_feature    order(236951..236953,236960..236968,236972..236977,
                     237026..237028,237035..237040,237047..237049,
                     237059..237064,237068..237073,237209..237214,
                     237221..237226,237236..237241,237248..237250,
                     237284..237289,237296..237301,237317..237319,
                     237587..237589,237596..237601,237608..237613,
                     237620..237622,237662..237664,237674..237676,
                     237686..237688,237695..237697,237707..237709,
                     237848..237850,237857..237862,237869..237871,
                     237881..237886,237893..237895,237926..237931,
                     237938..237943,237950..237955,237962..237964)
                     /gene="ybfB"
                     /locus_tag="BSU02170"
                     /note="putative substrate translocation pore; other site"
                     /db_xref="CDD:119392"
     gene            complement(238164..238448)
                     /gene="ybfE"
                     /locus_tag="BSU02180"
                     /db_xref="GeneID:938443"
     CDS             complement(238164..238448)
                     /gene="ybfE"
                     /locus_tag="BSU02180"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 5: No homology to any previously reported
                     sequences"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388100.2"
                     /db_xref="GI:255767058"
                     /db_xref="GeneID:938443"
                     /translation="MNHCLHSNTLAKIVCTVTLITLYFYFFSTRFNELIELAVQMFFA
                     LIGLFWVFIVSPFSRKVQISERFKQKSENARIVGMIDFVLEQKYKKSISE"
     gene            complement(238644..239555)
                     /gene="ybfF"
                     /locus_tag="BSU02190"
                     /db_xref="GeneID:938441"
     CDS             complement(238644..239555)
                     /gene="ybfF"
                     /locus_tag="BSU02190"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388101.1"
                     /db_xref="GI:16077288"
                     /db_xref="GeneID:938441"
                     /translation="MKNDQIVFEKTKNIAHDINQMQNQQEIIDYLFRQDSLTLNQLKH
                     YYSEPSLPLQFLVKVAVLCMFISMTLASFLFIQAKEVFTNTILSDISPAVFSIFTVIC
                     IFMTYTKIIKKGNKNKGKASLNQRSEFYEKNKLINTILYKKYKMDQQNIQANKHTASD
                     NEDSMNFSAVLNHVLTISKNDKELLGYLDTRDNAMLSQLKAYFSTRPFSLPHYMSLMF
                     CGSIIVVYATSLFSGQINYIDIPHIFIFLLLIIFLKILIDLIKLLNISRKGQLHTVLH
                     FAQRAEYLRMRGVIDFILTERYNKKIM"
     gene            complement(239644..241842)
                     /gene="ybfG"
                     /locus_tag="BSU02200"
                     /db_xref="GeneID:938433"
     CDS             complement(239644..241842)
                     /gene="ybfG"
                     /locus_tag="BSU02200"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf:  factor"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388102.1"
                     /db_xref="GI:16077289"
                     /db_xref="GeneID:938433"
                     /translation="MVDEMVLITQQWLNDTYSGKHGYNPVEESGKTGWDTIYGLTRAL
                     QIELGISEPADNFGPTTQRLFKPLKRQAPDSKPSNMNFILQGALWCKGFNPGGFTGVF
                     YEKTENAVKEFQKAAGLTTQDGIVTTLIMKALLDMSAFKLVSGGDSRIRQIQQNLNRD
                     YNDYIGLMPCDGLYGRDTNKALIYALQKEEGMSTSVANGFFGNGTTSLCPTLTPGDSR
                     TGFVLIVQYALYCNGKSFDPGEFDGKYGVGVVSAVKAFQEFMCLPQTGYADMPTIKAL
                     LSSSGDTTRTASACDTATIITAEKAQTLRNNGYKTVGRYLTGNVRTSSGLTSKALTSK
                     ELAVILDAGLKVFPIYQDGGYESSYFVKDQGTRDAYSAASAARRLGFPSGTTIYFAVD
                     FDAYDYEVTDKIIPYFQEIKSAFTKMQTFSTAPKYEIGVYGPRNICIRTSEAGLTKYS
                     FVANMSTGFSGNLGYPMPNNWAFDQFYEGTIGSGSGSIGIDKDGYSGRDSGASNVNPP
                     SDPVYDARLRTLTDILSTIPALENLTSLANAMFEFDTTETIFTSPELDIILSTSLLAT
                     IPSEGSPNTITITNGKPGAYITGLLGDTQTSLTASQIDSYQNLLNSLSLSVRNGYLEV
                     YVNPTAESLNIQIKIYTPDIPVGDNVTTGLTTTITFKIKTYKGVPVTSPESELALDWP
                     SYDQYLFPVVGVAALLLIGNMGSDLTNNKGVKVATALSAMLLAIFAYYTS"
     misc_feature    complement(241465..>241827)
                     /gene="ybfG"
                     /locus_tag="BSU02200"
                     /note="Putative peptidoglycan-binding domain-containing
                     protein [Cell envelope biogenesis, outer membrane];
                     Region: COG3409"
                     /db_xref="CDD:225943"
     misc_feature    complement(241441..241593)
                     /gene="ybfG"
                     /locus_tag="BSU02200"
                     /note="Putative peptidoglycan binding domain; Region:
                     PG_binding_1; pfam01471"
                     /db_xref="CDD:250643"
     misc_feature    complement(241009..241581)
                     /gene="ybfG"
                     /locus_tag="BSU02200"
                     /note="Putative peptidoglycan-binding domain-containing
                     protein [Cell envelope biogenesis, outer membrane];
                     Region: COG3409"
                     /db_xref="CDD:225943"
     misc_feature    complement(241015..241179)
                     /gene="ybfG"
                     /locus_tag="BSU02200"
                     /note="Putative peptidoglycan binding domain; Region:
                     PG_binding_1; pfam01471"
                     /db_xref="CDD:250643"
     misc_feature    complement(240364..241017)
                     /gene="ybfG"
                     /locus_tag="BSU02200"
                     /note="BacA is a bacterial lysin from Enterococcus
                     faecalis that degrades bacterial cell walls by catalyzing
                     the hydrolysis of 1,4-beta-linkages between
                     N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
                     BacA is homologous to the YbfG and YkuG lysins of...;
                     Region: GH25_BacA-like; cd06418"
                     /db_xref="CDD:119380"
     misc_feature    complement(order(240370..240372,240427..240429,
                     240490..240492,240547..240549,240667..240669,
                     240673..240675,240790..240792,240796..240798,
                     240898..240900,240970..240972))
                     /gene="ybfG"
                     /locus_tag="BSU02200"
                     /note="active site"
                     /db_xref="CDD:119380"
     gene            complement(241917..242837)
                     /gene="ybfH"
                     /locus_tag="BSU02210"
                     /db_xref="GeneID:938440"
     CDS             complement(241917..242837)
                     /gene="ybfH"
                     /locus_tag="BSU02210"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="NP_388103.1"
                     /db_xref="GI:16077290"
                     /db_xref="GeneID:938440"
                     /translation="MNIQRETSGHIAAIVTILIWGTTFISTKVLLADFSPMEILFYRF
                     LMGFIALILVRPNMIPFRNWRQELLFAGAGLFGVTLYFLLENIALTYTYASNVGMIVS
                     IIPMITAVLAHFLLEGEKLRLTFLIGFISALIGLLLITFNGNVVLRLNPLGDIMAAGA
                     ALVFGGYSIFMKKLSAYEYHIIELTQRVFLYGLLFMVPALFLFDFHFDLSRFSSASNI
                     LNMLFLGIGASALCFATWNYSVGVLGAVKSSAYIYMVPVITIAASVLILHENMTWIAL
                     LGGALTLLGLYISELKPKAKLLENGCKMDA"
     misc_feature    complement(242016..242816)
                     /gene="ybfH"
                     /locus_tag="BSU02210"
                     /note="Permeases of the drug/metabolite transporter (DMT)
                     superfamily [Carbohydrate transport and metabolism / Amino
                     acid transport and metabolism / General function
                     prediction only]; Region: RhaT; COG0697"
                     /db_xref="CDD:223769"
     misc_feature    complement(242415..242786)
                     /gene="ybfH"
                     /locus_tag="BSU02210"
                     /note="EamA-like transporter family; Region: EamA;
                     pfam00892"
                     /db_xref="CDD:250209"
     misc_feature    complement(242016..242354)
                     /gene="ybfH"
                     /locus_tag="BSU02210"
                     /note="EamA-like transporter family; Region: EamA;
                     pfam00892"
                     /db_xref="CDD:250209"
     gene            complement(242834..243661)
                     /gene="ybfI"
                     /locus_tag="BSU02220"
                     /db_xref="GeneID:938437"
     CDS             complement(242834..243661)
                     /gene="ybfI"
                     /locus_tag="BSU02220"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pr:  regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="NP_388104.1"
                     /db_xref="GI:16077291"
                     /db_xref="GeneID:938437"
                     /translation="MQNETRTLQLDPHLHIEAYRFKGIMQKFPNHFHDYYVIGFIEKG
                     QRYLACQDQEYIINPGDLLLFNPRDTHSCEQIDGRTLDYRCINVMPDIMEKAVKEITG
                     SGHLPYFSQHVLFRHELTASLQELHILISEEKQALRKEELFLHLLEELIRHYSDVTFL
                     SSVPEPSDEVKMVCEFLEEHYAENVTLNDLSELTGWSKYHLLRSFTKQKGITPNSYME
                     TIRINQAKKLLEQGVRPIDAAFQTGFSDQSHMTKFFKRQVGLTPKQYMKIFEKELHR"
     misc_feature    complement(243254..243625)
                     /gene="ybfI"
                     /locus_tag="BSU02220"
                     /note="AraC-like ligand binding domain; Region:
                     AraC_binding; pfam02311"
                     /db_xref="CDD:145456"
     misc_feature    complement(243011..243133)
                     /gene="ybfI"
                     /locus_tag="BSU02220"
                     /note="Bacterial regulatory helix-turn-helix proteins,
                     AraC family; Region: HTH_AraC; pfam00165"
                     /db_xref="CDD:249644"
     misc_feature    complement(242864..243112)
                     /gene="ybfI"
                     /locus_tag="BSU02220"
                     /note="helix_turn_helix, arabinose operon control protein;
                     Region: HTH_ARAC; smart00342"
                     /db_xref="CDD:197666"
     misc_feature    complement(242861..>242953)
                     /gene="ybfI"
                     /locus_tag="BSU02220"
                     /note="Bacterial regulatory helix-turn-helix proteins,
                     AraC family; Region: HTH_AraC; pfam00165"
                     /db_xref="CDD:249644"
     gene            243892..245046
                     /gene="purT"
                     /locus_tag="BSU02230"
                     /db_xref="GeneID:938438"
     CDS             243892..245046
                     /gene="purT"
                     /locus_tag="BSU02230"
                     /EC_number="2.1.2.-"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="non-folate utilizing enzyme, catalyzes the
                     production of beta-formyl glycinamide ribonucleotide from
                     formate, ATP, and beta-GAR and a side reaction producing
                     acetyl phosphate and ADP from acetate and ATP; involved in
                     de novo purine biosynthesis"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="NP_388105.1"
                     /db_xref="GI:16077292"
                     /db_xref="GeneID:938438"
                     /translation="MYQSKKVLLLGSGELGKEVVIEAQRLGVQTVAVDSYEHAPAMQV
                     AHNSYVVDMLDPEQIRTIIEKENPDLIVPEVEAIATDELLKLEEEGFHVIPNARAAKL
                     TMDREGIRRLAAETLGLATAGYEFANTYDEFIQAAAQIGFPCVVKPLMSSSGKGQSVC
                     RSEADLESCWETAMEGGRVKNGRVIVEEFIPFESEITLLTVRAVNGTAFCEPIGHVQK
                     DGDYIESWQPHDMTEQQIEEAKHIAKTITDELGGYGLFGVELFLAKDRVYFSEVSPRP
                     HDTGLVTLVTQNLSEFALHVRAILGFPITEITQLSPGASRPLKAPEELADYTVEGLEN
                     ALAVPKTQVRVFGKPITKAGRRMAVALSAADSVETARENAKKALDQLILK"
     misc_feature    243898..245043
                     /gene="purT"
                     /locus_tag="BSU02230"
                     /note="phosphoribosylglycinamide formyltransferase 2;
                     Validated; Region: purT; PRK09288"
                     /db_xref="CDD:236454"
     misc_feature    243904..>244110
                     /gene="purT"
                     /locus_tag="BSU02230"
                     /note="Carbamoyl-phosphate synthase L chain, N-terminal
                     domain; Region: CPSase_L_chain; pfam00289"
                     /db_xref="CDD:249744"
     misc_feature    244231..244752
                     /gene="purT"
                     /locus_tag="BSU02230"
                     /note="ATP-grasp domain; Region: ATP-grasp; pfam02222"
                     /db_xref="CDD:251165"
     gene            245190..246131
                     /gene="mpr"
                     /locus_tag="BSU02240"
                     /db_xref="GeneID:938430"
     CDS             245190..246131
                     /gene="mpr"
                     /locus_tag="BSU02240"
                     /EC_number="3.4.21.-"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15205417, 15375126;
                     Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular metalloprotease"
                     /protein_id="NP_388106.1"
                     /db_xref="GI:16077293"
                     /db_xref="GeneID:938430"
                     /translation="MKLVPRFRKQWFAYLTVLCLALAAAVSFGVPAKAAENPQTSVSN
                     TGKEADATKNQTSKADQVSAPYEGTGKTSKSLYGGQTELEKNIQTLQPSSIIGTDERT
                     RISSTTSFPYRATVQLSIKYPNTSSTYGCTGFLVNPNTVVTAGHCVYSQDHGWASTIT
                     AAPGRNGSSYPYGTYSGTMFYSVKGWTESKDTNYDYGAIKLNGSPGNTVGWYGYRTTN
                     SSSPVGLSSSVTGFPCDKTFGTMWSDTKPIRSAETYKLTYTTDTYGCQSGSPVYRNYS
                     DTGQTAIAIHTNGGSSYNLGTRVTNDVFNNIQYWANQ"
     misc_feature    245205..246125
                     /gene="mpr"
                     /locus_tag="BSU02240"
                     /note="V8-like Glu-specific endopeptidase [Amino acid
                     transport and metabolism]; Region: COG3591"
                     /db_xref="CDD:226119"
     misc_feature    245472..246092
                     /gene="mpr"
                     /locus_tag="BSU02240"
                     /note="Trypsin; Region: Trypsin; pfam00089"
                     /db_xref="CDD:249578"
     gene            246094..246492
                     /gene="ybfJ"
                     /locus_tag="BSU02250"
                     /db_xref="GeneID:938435"
     CDS             246094..246492
                     /gene="ybfJ"
                     /locus_tag="BSU02250"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type lp: lipoprotein"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388107.1"
                     /db_xref="GI:16077294"
                     /db_xref="GeneID:938435"
                     /translation="MYSTIFNIGQINKYSKLAIFMSILFLCGCSSQTHSSQKETTIPV
                     TLHVEDAKGLPVEGVQVTIVKAPSSDEEPSTEIGEILGKTDKNGDIKWDTGRKGDYSV
                     ALTKGETSVTHHISLTEDKKDHAIPLVFKE"
     misc_feature    246094..246486
                     /gene="ybfJ"
                     /locus_tag="BSU02250"
                     /note="Protein of unknown function (DUF2606); Region:
                     DUF2606; pfam10794"
                     /db_xref="CDD:119314"
     gene            246658..247548
                     /gene="ybfK"
                     /locus_tag="BSU02260"
                     /db_xref="GeneID:938434"
     CDS             246658..247548
                     /gene="ybfK"
                     /locus_tag="BSU02260"
                     /EC_number="3.1.1.-"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11389736; Product type e:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase YbfK"
                     /protein_id="NP_388108.1"
                     /db_xref="GI:16077295"
                     /db_xref="GeneID:938434"
                     /translation="MIQDSMQFAAVESGLRFYQAYDQSLSLWPIESEAFYVSTRFGKT
                     HIIASGPKDAPSLILLHGGLFSSAMWYPNIAAWSSQFRTYAVDIIGDKNKSIPSAAME
                     TRADFAEWMKDVFDSLGLETAHLAGLSLGGSHIVNFLLRAPERVERAVVISPAEAFIS
                     FHPDVYKYAAELTGARGAESYIKWITGDSYDLHPLLQRQIVAGVEWQDEQRSLKPTEN
                     GFPYVFTDQELKSIQVPVLLMFGEHEAMYHQQMAFERASVLVPGIQAEIVKNAGHLLS
                     LEQPEYVNQRVLSFLCGGIK"
     misc_feature    246796..>247122
                     /gene="ybfK"
                     /locus_tag="BSU02260"
                     /note="Putative lysophospholipase; Region: Hydrolase_4;
                     cl19140"
                     /db_xref="CDD:267493"
     misc_feature    246814..247530
                     /gene="ybfK"
                     /locus_tag="BSU02260"
                     /note="Predicted hydrolases or acyltransferases
                     (alpha/beta hydrolase superfamily) [General function
                     prediction only]; Region: MhpC; COG0596"
                     /db_xref="CDD:223669"
     gene            247744..248277
                     /gene="pssA"
                     /locus_tag="BSU02270"
                     /db_xref="GeneID:938427"
     CDS             247744..248277
                     /gene="pssA"
                     /locus_tag="BSU02270"
                     /EC_number="2.7.8.8"
                     /function="16.13: Shape"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 12682299, 14762009,
                     15743965, 15849754, 16850406; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="NP_388109.1"
                     /db_xref="GI:16077296"
                     /db_xref="GeneID:938427"
                     /translation="MNYIPCMITIGNFICGLLAIHSLLYHNIHSAVLFIFTGMFLDFF
                     DGMAARKLNAVSDMGRELDSFADLVTFGVAPSMLAYSVALYTLPFIGILCALTYSICG
                     MLRLSKFNIEQSKLPTFIGMPIPFAGMCLVILSFTYNPILLAIGTCGLSYLMVSKIKF
                     PHFKKHAAENLESGRWN"
     misc_feature    247744..>248247
                     /gene="pssA"
                     /locus_tag="BSU02270"
                     /note="Phosphatidylserine synthase [Lipid metabolism];
                     Region: PssA; COG1183"
                     /db_xref="CDD:224104"
     misc_feature    247768..248226
                     /gene="pssA"
                     /locus_tag="BSU02270"
                     /note="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase; Region: pssA; TIGR00473"
                     /db_xref="CDD:232991"
     gene            248268..248756
                     /gene="ybfM"
                     /locus_tag="BSU02280"
                     /db_xref="GeneID:938432"
     CDS             248268..248756
                     /gene="ybfM"
                     /locus_tag="BSU02280"
                     /function="16.8: Protect"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 12682299, 14762009, 15849754,
                     16850406; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein"
                     /protein_id="NP_388110.1"
                     /db_xref="GI:16077297"
                     /db_xref="GeneID:938432"
                     /translation="MELVQQLIADYGYLAIFLMLVLGIVGLPIPDEVMMTVVGYFTHT
                     DVLNYELSILISFVGALLGMLISYMIGRKAGRPFIDKYGKWVGLKEKRMMKVEKWMKK
                     YGPYSLILGYFIPGVRHVTCYFSGIGKMDLKTYVAFAAIGAFLWCFVFITIGRVIGII
                     HV"
     misc_feature    248286..>248741
                     /gene="ybfM"
                     /locus_tag="BSU02280"
                     /note="Uncharacterized membrane-associated protein
                     [Function unknown]; Region: DedA; COG0586"
                     /db_xref="CDD:223659"
     gene            248749..249540
                     /gene="psd"
                     /locus_tag="BSU02290"
                     /db_xref="GeneID:938431"
     CDS             248749..249540
                     /gene="psd"
                     /locus_tag="BSU02290"
                     /EC_number="4.1.1.65"
                     /function="16.13: Shape"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the decarboxylation of
                     phosphatidyl-L-serine to phosphatidylethanoleamine"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase proenzyme"
                     /protein_id="NP_388111.1"
                     /db_xref="GI:16077298"
                     /db_xref="GeneID:938431"
                     /translation="MFNTAVKILYRSLIELTNHRLSSYLIKGFCESKISKPVIPLFSK
                     HFRLNWDDVDGTAADYGSLSELFIRQINLERRPVSKEAHAVVSPVDGVVQTVGIINPN
                     QTFTVKGKDYSFAELTGCKSADHQYNGGYFVVLYLSPRHYHRFHSPISCRYQKLAELG
                     NRSYPVNQLGLKYGKDVLSKNYRFVYELNSGSRNVLMIPVGAMNINSIVQTNTRTELE
                     IGEELGYFSFGSTVILVFEKDAFQPSAHLAEGQEVQVGELIGYEE"
     misc_feature    248761..249537
                     /gene="psd"
                     /locus_tag="BSU02290"
                     /note="phosphatidylserine decarboxylase; Provisional;
                     Region: PRK03140"
                     /db_xref="CDD:179544"
     gene            249595..249873
                     /gene="ybfN"
                     /locus_tag="BSU02300"
                     /db_xref="GeneID:938429"
     CDS             249595..249873
                     /gene="ybfN"
                     /locus_tag="BSU02300"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 5: No homology to any previously reported
                     sequences"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388112.1"
                     /db_xref="GI:16077299"
                     /db_xref="GeneID:938429"
                     /translation="MEKQIISWITDYQNTGDEAVLRQVREVCWPIVEAVLQEKVMDDE
                     QANNLREKGIERFPFIISKYQADVQLPVETFLQNTYRFYFHQVMRESS"
     gene            249979..251319
                     /gene="ybfO"
                     /locus_tag="BSU02310"
                     /db_xref="GeneID:938424"
     CDS             249979..251319
                     /gene="ybfO"
                     /locus_tag="BSU02310"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase YbfO"
                     /protein_id="NP_388113.1"
                     /db_xref="GI:16077300"
                     /db_xref="GeneID:938424"
                     /translation="MKRMIVRMTLPLLIVCLAFSSFSASARAASEEKYWDHWIERHAQ
                     PLDASNASNKDLRFLKKVLKGKRIVQLGETTHGAGEINATKVRMIKYLHEELGYDVLA
                     FESGFPDTNASYLNMDQLTPKSTMKNSIYAVWHTEDVVELFDYMKEQKEKGDPLILTG
                     FDIQSMKNSFNVAATQWVKAVDPEKAELLSQSENDFSTLVTDSNTFDEFSQKKEKLVK
                     NYQKLIKFTKTHASELKENLPKEPKAYEMFMHSLQLRIDVMETYMLEEMKEKLEEYPE
                     NIEDFSFFMRDRMMAEQFQWVADTLYPKKKIIVWGHNYHLRKQNTKMIKDWVQLNGPN
                     MGDYLPERLKKQTYTIGIYAYSGASLDSSDNKTVKPVTSPPPSGSLEALLKAADRPAV
                     FVDFLHTKNKKGTSWMYTPRTALYWGYMEEQMILKEQYDGVIWLEHITPSVIIK"
     misc_feature    250069..251316
                     /gene="ybfO"
                     /locus_tag="BSU02310"
                     /note="Erythromycin esterase homolog [General function
                     prediction only]; Region: COG2312"
                     /db_xref="CDD:225194"
     gene            251427..252314
                     /gene="ybfP"
                     /locus_tag="BSU02320"
                     /db_xref="GeneID:938428"
     CDS             251427..252314
                     /gene="ybfP"
                     /locus_tag="BSU02320"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pr:  regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="NP_388114.1"
                     /db_xref="GI:16077301"
                     /db_xref="GeneID:938428"
                     /translation="MYYEKAVQKTINWIESHLHEQISNEDIVNVSSFSKFHFHRIFQK
                     EVGMSVASYIRLRRLANAAAALLYTDHRIIDIALYYQFESQEAFTRTFKKMYHMPPGA
                     YRTFMKRFTSKKEESYMEKKMKGWVLSGSHPFQFEMGIDRENVHQGKASGYLKSTMVQ
                     DIGEFATMMQQFKADRYLGKRLRLSSFIKTKGVQHFASLWMRVDSAADDVLQFDNMSN
                     RPITGTTNWNHYAIVLDVPENSAVISFGVQLSGPGQVWMDHVVFEEVDESVPSTNLEM
                     PGELLDEPVNLSFEEELQK"
     misc_feature    251466..251588
                     /gene="ybfP"
                     /locus_tag="BSU02320"
                     /note="Bacterial regulatory helix-turn-helix proteins,
                     AraC family; Region: HTH_AraC; pfam00165"
                     /db_xref="CDD:249644"
     misc_feature    251487..251738
                     /gene="ybfP"
                     /locus_tag="BSU02320"
                     /note="helix_turn_helix, arabinose operon control protein;
                     Region: HTH_ARAC; smart00342"
                     /db_xref="CDD:197666"
     gene            252514..253482
                     /gene="ybfQ"
                     /locus_tag="BSU02330"
                     /db_xref="GeneID:938426"
     CDS             252514..253482
                     /gene="ybfQ"
                     /locus_tag="BSU02330"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 10939241; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388115.1"
                     /db_xref="GI:16077302"
                     /db_xref="GeneID:938426"
                     /translation="MEKQYRVLLYYKYVPIEDPEAFREQHLAFCKELGLLGRILVSSE
                     GINGTVSGTVEQTEKYMETMKADPRFADMVFKIDEAEGHAFKKIFVRHKKELVTLRLE
                     DDVDPNETTGQHLKPAEFYEKMQDPNTIVIDARNDYEYDLGHFRGAVRPDIEAFRELP
                     EWIEEHKDMLEGKKILTYCTGGVRCEKFSGWLVKQGFEDVAQLDGGIVTYGKDPEVQG
                     KLWDGQCYVFDERISVPVNRVEHVIVGKDYFTGEPCERYVNCANPSCNKKMICTPENE
                     YKYMRSCSHECRTNPRNLYVKEHNMTEEEVNARLAAIETEDHAAAE"
     misc_feature    252517..253455
                     /gene="ybfQ"
                     /locus_tag="BSU02330"
                     /note="putative rhodanese-related sulfurtransferase;
                     Provisional; Region: PRK00142"
                     /db_xref="CDD:234663"
     misc_feature    252847..253149
                     /gene="ybfQ"
                     /locus_tag="BSU02330"
                     /note="Member of the Rhodanese Homology Domain
                     superfamily. This CD includes Escherichia coli YceA,
                     Bacillus subtilis YbfQ, and similar uncharacterized
                     proteins; Region: RHOD_YceA; cd01518"
                     /db_xref="CDD:238776"
     misc_feature    253048..253050
                     /gene="ybfQ"
                     /locus_tag="BSU02330"
                     /note="active site residue [active]"
                     /db_xref="CDD:238776"
     misc_feature    253369..253452
                     /gene="ybfQ"
                     /locus_tag="BSU02330"
                     /note="Protein of unknown function (DUF3650); Region:
                     DUF3650; pfam12368"
                     /db_xref="CDD:257012"
     gene            complement(253518..254762)
                     /gene="gltP"
                     /locus_tag="BSU02340"
                     /db_xref="GeneID:938421"
     CDS             complement(253518..254762)
                     /gene="gltP"
                     /locus_tag="BSU02340"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15849754, 16850406,
                     7751298; Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="proton glutamate symport protein"
                     /protein_id="NP_388116.1"
                     /db_xref="GI:16077303"
                     /db_xref="GeneID:938421"
                     /translation="MKKLIAFQILIALAVGAVIGHFFPDFGMALRPVGDGFIRLIKMI
                     VVPIVFSTIVIGAAGSGSMKKMGSLGIKTIIWFEVITTLVLGLGLLLANVLKPGVGLD
                     LSHLAKKDIHELSGYTDKVVDFKQMILDIIPTNIIDVMARNDLLAVIFFAILFGVAAA
                     GIGKASEPVMKFFESTAQIMFKLTQIVMVTAPIGVLALMAASVGQYGIELLLPMFKLV
                     GTVFLGLFLILFVLFPLVGLIFQIKYFEVLKMIWDLFLIAFSTTSTETILPQLMDRME
                     KYGCPKRVVSFVVPSGLSLNCDGSSLYLSVSCIFLAQAFQVDMTLSQQLLMMLVLVMT
                     SKGIAAVPSGSLVVLLATANAVGLPAEGVAIIAGVDRVMDMARTGVNVPGHAIACIVV
                     SKWEKAFRQKEWVSANSQTESI"
     misc_feature    complement(253554..254762)
                     /gene="gltP"
                     /locus_tag="BSU02340"
                     /note="Na+/H+-dicarboxylate symporters [Energy production
                     and conversion]; Region: GltP; COG1301"
                     /db_xref="CDD:224220"
     gene            complement(254907..256802)
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /db_xref="GeneID:938418"
     CDS             complement(254907..256802)
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /EC_number="2.7.1.69"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 10627040, 15849754, 16850406; Product type t :
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system glucosamine-specific EIICBA
                     component"
                     /protein_id="NP_388117.1"
                     /db_xref="GI:16077304"
                     /db_xref="GeneID:938418"
                     /translation="MFKKAFQILQQLGRALMTPVAVLPAAGLLLRFGDKDLLNIPIIK
                     DAGGVVFDNLPLIFAVGVAIGLAGGEGVAGLAAVIGYLILTVTLDNMGKLLGLQPPYE
                     GAEHLIDMGVFGGIIIGLLAAYLYKRFSSIELHPVLGFFSGKRFVPIITSVSSLVIGV
                     IFSFVWPLIQNGINAASSLIADSTVGLFFYATIYRLLIPFGLHHIFYTPFYFMMGEYT
                     DPSTGNTVTGDLTRFFAGDPTAGRFMMGDFPYMIFCLPAVALAIIHTARPEKKKMISG
                     VMISAALTSMLTGITEPVEFSFLFVAPVLYLINSILAGVIFVVCDLFHVRHGYTFSGG
                     GIDYVLNYGLSTNGWVVIPVGIVFAFIYYYLFRFAILKWNLKTPGRETDEDGQNEEKA
                     PVAKDQLAFHVLQALGGQQNIANLDACITRLRVTVHQPSQVCKDELKRLGAVGVLEVN
                     NNFQAIFGTKSDALKDDIKTIMAGGVPATAAALDTVTDKPLKPDSDETFIYPIKGETV
                     SLGDVPDQVFSEKMMGEGFAIIPSEGKVVAPADGEIVSIFPTKHAIGFMSAGGTEILI
                     HVGIDTVKLNGEGFEAHVTSGQAVKQGELLLTFDLNYIKQHAASAITPVIFTNTSEED
                     LKHIQMK"
     misc_feature    complement(255630..256802)
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /note="Phosphotransferase system IIC components,
                     glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
                     transport and metabolism]; Region: PtsG; COG1263"
                     /db_xref="CDD:224183"
     misc_feature    complement(255381..256799)
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /note="PTS system, glucose-specific IIBC component;
                     Region: PTS-II-BC-glcB; TIGR02002"
                     /db_xref="CDD:233681"
     misc_feature    complement(255387..255614)
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /note="PTS_IIB, PTS system, glucose/sucrose specific IIB
                     subunit. The bacterial phosphoenolpyruvate: sugar
                     phosphotransferase system (PTS) is a multi-protein system
                     involved in the regulation of a variety of metabolic and
                     transcriptional processes. This family...; Region:
                     PTS_IIB_glc; cd00212"
                     /db_xref="CDD:238130"
     misc_feature    complement(255531..255551)
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /note="active site turn [active]"
                     /db_xref="CDD:238130"
     misc_feature    complement(255546..255548)
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /note="phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238130"
     misc_feature    complement(254937..255308)
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /note="PTS_IIA, PTS system, glucose/sucrose specific IIA
                     subunit. The bacterial phosphoenolpyruvate: sugar
                     phosphotransferase system (PTS) is a multi-protein system
                     involved in the regulation of a variety of metabolic and
                     transcriptional processes. This family...; Region:
                     PTS_IIA_glc; cd00210"
                     /db_xref="CDD:238128"
     misc_feature    complement(order(254940..254942,254949..254951,
                     255045..255047,255081..255086,255090..255092,
                     255102..255104,255108..255116,255132..255140,
                     255156..255161,255165..255170,255234..255239,
                     255249..255260))
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /note="HPr interaction site; other site"
                     /db_xref="CDD:238128"
     misc_feature    complement(order(254949..254951,255075..255077,
                     255081..255086,255090..255092,255102..255104,
                     255108..255110,255147..255149,255159..255161,
                     255165..255167,255234..255239,255243..255245,
                     255249..255254,255258..255260))
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /note="glycerol kinase (GK) interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:238128"
     misc_feature    complement(order(255096..255098,255102..255104,
                     255147..255149,255153..255155))
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /note="active site"
                     /db_xref="CDD:238128"
     misc_feature    complement(255102..255104)
                     /gene="nagP"
                     /locus_tag="BSU02350"
                     /note="phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238128"
     gene            complement(256823..257572)
                     /gene="nagBB"
                     /locus_tag="BSU02360"
                     /db_xref="GeneID:938425"
     CDS             complement(256823..257572)
                     /gene="nagBB"
                     /locus_tag="BSU02360"
                     /EC_number="3.5.99.6"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.13: Shape"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism; Product
                     type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase 2"
                     /protein_id="NP_388118.1"
                     /db_xref="GI:16077305"
                     /db_xref="GeneID:938425"
                     /translation="MKILIAEHYEELCKLSAAIIKEQIQAKKDAVLGLATGSTPVGLY
                     KQLISDYQAGEIDFSKVTTFNLDEYAGLSPSHPQSYNHFMHEHLFQHINMQPDHIHIP
                     QGDNPQLEAACKVYEDLIRQAGGIDVQILGIGANGHIGFNEPGSDFEDRTRVVKLSES
                     TIQANARFFGGDPVLVPRLAISMGIKTIMEFSKHIVLLASGEEKADAIQKMAEGPVTT
                     DVPASILQKHNHVTVIADYKAAQKLKSASFS"
     misc_feature    complement(256844..257545)
                     /gene="nagBB"
                     /locus_tag="BSU02360"
                     /note="GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P)
                     deaminase subfamily; GlcN6P deaminase catalyzes the
                     reversible conversion of GlcN6P to D-fructose-6-phosphate
                     (Fru6P) and ammonium. The reaction is an aldo-keto
                     isomerization coupled with an amination or...; Region:
                     GlcN6P_deaminase; cd01399"
                     /db_xref="CDD:238693"
     misc_feature    complement(order(256961..256963,257072..257074,
                     257153..257155,257159..257161,257174..257179,
                     257372..257377,257456..257467))
                     /gene="nagBB"
                     /locus_tag="BSU02360"
                     /note="active site"
                     /db_xref="CDD:238693"
     misc_feature    complement(order(256889..256897,256919..256939,
                     257105..257107,257129..257134,257138..257140))
                     /gene="nagBB"
                     /locus_tag="BSU02360"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:238693"
     misc_feature    complement(order(257105..257116,257132..257137))
                     /gene="nagBB"
                     /locus_tag="BSU02360"
                     /note="allosteric site; other site"
                     /db_xref="CDD:238693"
     misc_feature    complement(order(257042..257050,257060..257092,
                     257099..257101))
                     /gene="nagBB"
                     /locus_tag="BSU02360"
                     /note="active site lid [active]"
                     /db_xref="CDD:238693"
     misc_feature    complement(order(256844..256855,256862..256864,
                     256955..256957,256967..256969,257084..257086))
                     /gene="nagBB"
                     /locus_tag="BSU02360"
                     /note="hexamer (dimer of trimers) interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:238693"
     gene            257791..258498
                     /gene="ybgA"
                     /locus_tag="BSU02370"
                     /db_xref="GeneID:938422"
     CDS             257791..258498
                     /gene="ybgA"
                     /locus_tag="BSU02370"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pr:  regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="NP_388119.1"
                     /db_xref="GI:16077306"
                     /db_xref="GeneID:938422"
                     /translation="MTALYSVIKFKIIELIKSGKYQANDQLPTESEFCEQYDVSRTTV
                     RLALQQLELEGYIKRIQGKGTFVSAAKIQTPIPHKITSFAEQMRGLRSESKVLELVVI
                     PADHSIAELLKMKENEPVNKLVRVRYAEGEPLQYHTSYIPWKAAPGLAQEECTGSLFE
                     LLRTKYNIEISRGTESIEPILTDETISGHLLTNVGAPAFLSESLTYDKNEEVVEYAQI
                     ITRGDRTKFTVEQSYHS"
     misc_feature    257791..258480
                     /gene="ybgA"
                     /locus_tag="BSU02370"
                     /note="Transcriptional regulators [Transcription]; Region:
                     PhnF; COG2188"
                     /db_xref="CDD:225099"
     misc_feature    257800..257994
                     /gene="ybgA"
                     /locus_tag="BSU02370"
                     /note="Winged helix-turn-helix (WHTH) DNA-binding domain
                     of the GntR family of transcriptional regulators; Region:
                     WHTH_GntR; cd07377"
                     /db_xref="CDD:153418"
     misc_feature    order(257803..257805,257872..257874,257878..257883,
                     257905..257919,257923..257928,257935..257937,
                     257965..257970,257974..257985)
                     /gene="ybgA"
                     /locus_tag="BSU02370"
                     /note="DNA-binding site [nucleotide binding]; DNA binding
                     site"
                     /db_xref="CDD:153418"
     misc_feature    258052..258468
                     /gene="ybgA"
                     /locus_tag="BSU02370"
                     /note="UTRA domain; Region: UTRA; pfam07702"
                     /db_xref="CDD:254372"
     gene            258532..258807
                     /gene="ybgB"
                     /locus_tag="BSU02380"
                     /db_xref="GeneID:938423"
     CDS             258532..258807
                     /gene="ybgB"
                     /locus_tag="BSU02380"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 5: No homology to any previously reported
                     sequences; PubMedId: 12897008"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein"
                     /protein_id="NP_388120.1"
                     /db_xref="GI:16077307"
                     /db_xref="GeneID:938423"
                     /translation="MFLFTNGKVLWGAVIAAFILSIVFYPFLPTQMPIHYDVANSPDL
                     TVNKLAGTVMLPVLMVVFAWARKINWQFVFAVYILLICHIVVLCLAL"
     misc_feature    258538..>258804
                     /gene="ybgB"
                     /locus_tag="BSU02380"
                     /note="Predicted integral membrane protein [Function
                     unknown]; Region: COG5658"
                     /db_xref="CDD:227945"
     misc_feature    258562..258711
                     /gene="ybgB"
                     /locus_tag="BSU02380"
                     /note="Protein of unknown function (DUF1648); Region:
                     DUF1648; pfam07853"
                     /db_xref="CDD:254469"
     gene            259016..260086
                     /gene="ybgE"
                     /locus_tag="BSU02390"
                     /db_xref="GeneID:938420"
     CDS             259016..260086
                     /gene="ybgE"
                     /locus_tag="BSU02390"
                     /EC_number="2.6.1.42"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the transamination of the branched-chain
                     amino acids to their respective alpha-keto acids"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino acid transaminase 1"
                     /protein_id="NP_388121.1"
                     /db_xref="GI:16077308"
                     /db_xref="GeneID:938420"
                     /translation="MNKLIEREKTVYYKEKPDPSSLGFGQYFTDYMFVMDYEEGIGWH
                     HPRIAPYAPLTLDPSSSVFHYGQAVFEGLKAYRTDDGRVLLFRPDQNIKRLNRSCERM
                     SMPPLDEELVLEALTQLVELEKDWVPKEKGTSLYIRPFVIATEPSLGVKASRSYTFMI
                     VLSPVGSYYGDDQLKPVRIYVEDEYVRAVNGGVGFAKTAGNYAASLQAQRKANELGYD
                     QVLWLDAIEKKYVEEVGSMNIFFVINGEAVTPALSGSILSGVTRASAIELIRSWGIPV
                     REERISIDEVYAASARGELTEVFGTGTAAVVTPVGELNIHGKTVIVGDGQIGDLSKKL
                     YETITDIQLGKVKGPFNWTVEV"
     misc_feature    259016..260083
                     /gene="ybgE"
                     /locus_tag="BSU02390"
                     /note="branched-chain amino acid aminotransferase;
                     Provisional; Region: PRK13357"
                     /db_xref="CDD:237363"
     misc_feature    259178..260047
                     /gene="ybgE"
                     /locus_tag="BSU02390"
                     /note="BCAT_beta_family: Branched-chain aminotransferase
                     catalyses the transamination of the branched-chain amino
                     acids  leusine, isoleucine and valine to their respective
                     alpha-keto acids, alpha-ketoisocaproate,
                     alpha-keto-beta-methylvalerate and...; Region:
                     BCAT_beta_family; cd01557"
                     /db_xref="CDD:238798"
     misc_feature    order(259178..259192,259199..259213,259217..259219,
                     259223..259225,259316..259318,259427..259429,
                     259433..259435,259451..259459,259469..259471,
                     259490..259492,259610..259612,259625..259627,
                     259631..259633,259643..259645,259685..259687)
                     /gene="ybgE"
                     /locus_tag="BSU02390"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238798"
     misc_feature    order(259208..259210,259223..259225,259295..259297,
                     259463..259465,259604..259606,259619..259621,
                     259712..259714,259793..259798,259922..259924)
                     /gene="ybgE"
                     /locus_tag="BSU02390"
                     /note="substrate-cofactor binding pocket; other site"
                     /db_xref="CDD:238798"
     misc_feature    259604..259606
                     /gene="ybgE"
                     /locus_tag="BSU02390"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238798"
     gene            complement(260123..261535)
                     /gene="ybgF"
                     /locus_tag="BSU02400"
                     /db_xref="GeneID:938415"
     CDS             complement(260123..261535)
                     /gene="ybgF"
                     /locus_tag="BSU02400"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406, 7704263; Product
                     type pt:  transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease YbgF"
                     /protein_id="NP_388122.1"
                     /db_xref="GI:16077309"
                     /db_xref="GeneID:938415"
                     /translation="MNSAHNKNETTFQRSMKSRHLFMLSLGGVIGTGLFLSSGYTIQQ
                     AGPAGTILAYLVGAGIVYLVMLCLGELSVAMPVTGAFHTYAAKYIGPGTGFTVAWLYW
                     LTWTVALGSEFTAAGLLMQRWFPHTSVWMWSAVFALFIFLLNAFSVKFFAESEFWFSS
                     IKVLAIVLFILLGGSAMFGIIPIKGGEAAPMLSNFTAEGGLFPNGFVPILMTMLSVNF
                     AFSGTELIGIAAGESVDPDKTIPKAIKTTVWRLSLFFVGTIFVLSGLIPIQDAGVIKS
                     PFVAVFDRVGVPYAADIMNFVILTAILSAANSGLYASSRMLWSLSKEKTLHPTFAKLT
                     SKGTPFNALVFSMIGGILSLLSSVFAPDTVYVVLVSISGFAVVVVWMGIAASQFMFRK
                     RYIEAGNKVTDLKYRTPLYPFVPIAAFLLCLASVVGIAFDPNQRIALYCGVPFMAICY
                     AIYYVKNRKSQPAADMTHSK"
     misc_feature    complement(260144..261535)
                     /gene="ybgF"
                     /locus_tag="BSU02400"
                     /note="S-methylmethionine transporter; Provisional;
                     Region: PRK11387"
                     /db_xref="CDD:236904"
     misc_feature    complement(<260462..261493)
                     /gene="ybgF"
                     /locus_tag="BSU02400"
                     /note="Transmembrane amino acid transporter protein;
                     Region: Aa_trans; cl17468"
                     /db_xref="CDD:266708"
     gene            complement(261656..262603)
                     /gene="mmuM"
                     /locus_tag="BSU02410"
                     /db_xref="GeneID:938412"
     CDS             complement(261656..262603)
                     /gene="mmuM"
                     /locus_tag="BSU02410"
                     /EC_number="2.1.1.10"
                     /function="16.6: Maintain"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="converts homocysteine and S-adenosyl-methionine to
                     methionine and S-adenosyl-homocysteine or
                     S-methyl-methionine and homocysteine to two methionines"
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase YbgG"
                     /protein_id="NP_388123.1"
                     /db_xref="GI:16077310"
                     /db_xref="GeneID:938412"
                     /translation="MNPIQHILDTYPLIVLDGAMATELERKGCNLNDSLWSAKILMEE
                     PELIKQVHTDYFAAGADCAITASYQSTFEGFAARGLSEAEARRLIELSVSIAAEARDE
                     FWSLEENRLNRPKPIIAASIGPYGAYLADGSEYRGNYAISEDELIEFHRPRMKALIEA
                     GADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISDGTPAADCASWLDE
                     HRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGEQYDPETKTWNGAACAESY
                     GASARTWHEKGARLIGGCCRTKPENIQEIAAWARSLKTT"
     misc_feature    complement(261671..262603)
                     /gene="mmuM"
                     /locus_tag="BSU02410"
                     /note="homocysteine methyltransferase; Provisional;
                     Region: mmuM; PRK09485"
                     /db_xref="CDD:181899"
     gene            complement(262732..264168)
                     /gene="glnT"
                     /locus_tag="BSU02420"
                     /db_xref="GeneID:938419"
     CDS             complement(262732..264168)
                     /gene="glnT"
                     /locus_tag="BSU02420"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2b: Function of strongly homologous gene;
                     PubMedId: 15849754, 15995196, 16850406; Product type t:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamine symporter GlnT"
                     /protein_id="NP_388124.2"
                     /db_xref="GI:255767059"
                     /db_xref="GeneID:938419"
                     /translation="MQQILEHIVGIANDLLWSKLLIVLLLSFGIYFTFRLKFLQVRML
                     KEMVRVLREGAASRSKNSISPFQAFCISMAARVGTGNITGIAIAIALGGPGAIFWMWI
                     IAIIGSASSFVESTLAQIYKVKDVNGFRGGPAYYMEKGLNKRWMGALFAVLITLSFGI
                     VFNSVQSNTVSLAFENAFGTNRLTLGLILIAVFGTIIFGGVKRIAKLAESIVVVLAVL
                     YIGVAFFVIFSNITQLPGVLALIVKNAFGFDQAAGGALGAALMQGVRRGIFSNEAGMG
                     SAPNAAATATTSHPVKQGLIQAFGVLTDTLVICTSTAFIILFSDAYHTPGLSGIALTQ
                     ASLSSHVGSWASGFLAILILLFGFCALIGNYYYGETNIGFLNKSKKLIFVYRIGVLAM
                     IVFGCVAKVQLVWDLADLFMGLMVIVNLIAIFLLSKVVFTALKDYTRQKKAGKDPVFY
                     KDVLKNHNGIECWPVSDTKTDTHNKQIS"
     misc_feature    complement(262831..264168)
                     /gene="glnT"
                     /locus_tag="BSU02420"
                     /note="Na+/alanine symporter [Amino acid transport and
                     metabolism]; Region: AlsT; COG1115"
                     /db_xref="CDD:224040"
     gene            complement(264191..265174)
                     /gene="ybgJ"
                     /locus_tag="BSU02430"
                     /db_xref="GeneID:938416"
     CDS             complement(264191..265174)
                     /gene="ybgJ"
                     /locus_tag="BSU02430"
                     /EC_number="3.5.1.2"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the formation of glutamate from
                     glutamine"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase 1"
                     /protein_id="NP_388125.1"
                     /db_xref="GI:16077312"
                     /db_xref="GeneID:938416"
                     /translation="MKELIKEHQKDINPALQLHDWVEYYRPFAANGQSANYIPALGKV
                     NDSQLGICVLEPDGTMIHAGDWNVSFTMQSISKVISFIAACMSRGIPYVLDRVDVEPT
                     GDAFNSIIRLEINKPGKPFNPMINAGALTIASILPGESAYEKLEFLYSVMETLIGKRP
                     RIHEEVFRSEWETAHRNRALAYYLKETNFLEAEVEETLEVYLKQCAMESTTEDIALIG
                     LILAHDGYHPIRHEQVIPKDVAKLAKALMLTCGMYNASGKYAAFVGVPAKSGVSGGIM
                     ALVPPSARREQPFQSGCGIGIYGPAIDEYGNSLTGGMLLKHMAQEWELSIF"
     misc_feature    complement(264194..265165)
                     /gene="ybgJ"
                     /locus_tag="BSU02430"
                     /note="glutaminase; Reviewed; Region: PRK12357"
                     /db_xref="CDD:237074"
     gene            265476..266708
                     /gene="glnJ"
                     /locus_tag="BSU02440"
                     /db_xref="GeneID:938417"
     CDS             265476..266708
                     /gene="glnJ"
                     /locus_tag="BSU02440"
                     /EC_number="2.7.13.3"
                     /function="16.3: Control"
                     /function="16.12: Sense"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2b: Function of strongly homologous gene;
                     PubMedId: 11717295, 15995196; Product type rc : receptor"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="NP_388126.2"
                     /db_xref="GI:255767060"
                     /db_xref="GeneID:938417"
                     /translation="MLITVPLAGELKFYPLNEEFRVSFGAPVFFFFLSLLRHVPAVLP
                     GFLTGAAVFIFRVFLELWGGGHNGLTPILYDQASGFFFYMTYACLFSILKANRFRERP
                     IMLGFIGFMIEVVSDCVELTVQFLIFHTVVTPEKITDIAVIAISHTFIVMSFYSVLKL
                     YETQSREKQTRQQHEHMLMIVSNLYEETVHLKKTLKTTEKVTNDSYQLYREMKGKDVQ
                     LSGRILRLAGEIHEVKKDNQRIFAGLSKLISNESLRDYMRASDLLQLVIRMNEKYAEA
                     LGKQIDFYCSIEGEHDEYHVFIVLSIINNLTANAVEAMDEEGMVSLRLRKPNESMVEF
                     QVEDNGPGISEKIGDIVFDPGFTSKYDEFGTPSTGIGLSYVKEIVTELEGDITFDNQQ
                     RGVVFAIRLPVRHLIQKG"
     misc_feature    266127..>266294
                     /gene="glnJ"
                     /locus_tag="BSU02440"
                     /note="Chorismate mutase type II; Region: CM_2; cl00693"
                     /db_xref="CDD:260576"
     misc_feature    <266205..266687
                     /gene="glnJ"
                     /locus_tag="BSU02440"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; Region: BaeS; COG0642"
                     /db_xref="CDD:223715"
     misc_feature    266376..266678
                     /gene="glnJ"
                     /locus_tag="BSU02440"
                     /note="Histidine kinase-like ATPases; This family includes
                     several ATP-binding proteins for example: histidine
                     kinase, DNA gyrase B, topoisomerases, heat shock protein
                     HSP90, phytochrome-like ATPases and DNA mismatch repair
                     proteins; Region: HATPase_c; cd00075"
                     /db_xref="CDD:238030"
     misc_feature    order(266388..266390,266400..266402,266409..266411,
                     266481..266483,266487..266489,266493..266495,
                     266499..266504,266580..266591,266637..266639,
                     266643..266645,266655..266660,266664..266666)
                     /gene="glnJ"
                     /locus_tag="BSU02440"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:238030"
     misc_feature    266400..266402
                     /gene="glnJ"
                     /locus_tag="BSU02440"
                     /note="Mg2+ binding site [ion binding]; other site"
                     /db_xref="CDD:238030"
     misc_feature    order(266493..266495,266499..266501,266580..266582,
                     266586..266588)
                     /gene="glnJ"
                     /locus_tag="BSU02440"
                     /note="G-X-G motif; other site"
                     /db_xref="CDD:238030"
     gene            266719..267663
                     /gene="glnL"
                     /locus_tag="BSU02450"
                     /db_xref="GeneID:938414"
     CDS             266719..267663
                     /gene="glnL"
                     /locus_tag="BSU02450"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11717295, 15995196;
                     Product type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulatory protein GlnL"
                     /protein_id="NP_388127.1"
                     /db_xref="GI:16077314"
                     /db_xref="GeneID:938414"
                     /translation="MRFFIADDDRAVRSILRQIIEDEDLGEAAGEADDGSQVEGHMLQ
                     FKQIDILLIDLLMPGRDGIETIRQIQNTYSGKIVMISQVEAKEMVGEAYSLGIEYFIH
                     KPINRIEIVTVLQKVKERIELEHSIGAIQHSLSRLVNRTERKARPQQKSDSGLKEAGT
                     FLLSELGMMGEGGAHDLMAVLQYLAEHEQSEPHEKQSPSLKQIFTQVAVRKLGTGASQ
                     TEVNREMKASEQRIRRAIIHSLHHFASLGTTDFSNPKFETYASKFFDFPVVSQKMKEL
                     QSKDAKPLAPARINMKKFIHVFFLEAKLLHETMKQRRI"
     misc_feature    266719..>267069
                     /gene="glnL"
                     /locus_tag="BSU02450"
                     /note="Response regulator containing a CheY-like receiver
                     domain and an HTH DNA-binding domain [Signal transduction
                     mechanisms / Transcription]; Region: CitB; COG2197"
                     /db_xref="CDD:225107"
     misc_feature    266728..267069
                     /gene="glnL"
                     /locus_tag="BSU02450"
                     /note="Signal receiver domain; originally thought to be
                     unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
                     recently identified in eukaroytes ETR1 Arabidopsis
                     thaliana; this domain receives the signal from the sensor
                     partner in a two-component systems; Region: REC; cd00156"
                     /db_xref="CDD:238088"
     misc_feature    order(266737..266742,266878..266880,266902..266904,
                     266959..266961,267016..267018,267025..267030)
                     /gene="glnL"
                     /locus_tag="BSU02450"
                     /note="active site"
                     /db_xref="CDD:238088"
     misc_feature    266878..266880
                     /gene="glnL"
                     /locus_tag="BSU02450"
                     /note="phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238088"
     misc_feature    order(266887..266892,266896..266904)
                     /gene="glnL"
                     /locus_tag="BSU02450"
                     /note="intermolecular recognition site; other site"
                     /db_xref="CDD:238088"
     misc_feature    267025..267033
                     /gene="glnL"
                     /locus_tag="BSU02450"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238088"
     misc_feature    267187..267612
                     /gene="glnL"
                     /locus_tag="BSU02450"
                     /note="YcbB domain; Region: YcbB; pfam08664"
                     /db_xref="CDD:149650"
     gene            267890..268816
                     /gene="ycbC"
                     /locus_tag="BSU02460"
                     /db_xref="GeneID:938409"
     CDS             267890..268816
                     /gene="ycbC"
                     /locus_tag="BSU02460"
                     /EC_number="4.2.1.41"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the formation of 2,5-dioxopentanoate from
                     5-dehydro-4-deoxy-D-glucarate"
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-4-deoxyglucarate dehydratase"
                     /protein_id="NP_388128.2"
                     /db_xref="GI:255767061"
                     /db_xref="GeneID:938409"
                     /translation="MSRIRKAPAGILGFPVAPFNTQGKLEEEALFQNIEFLLNEGLEA
                     IFIACGSGEFQSLSQKEYEQMVEVAVSAAGGKVPVYTGVGGNLSTALDWAQLSEKKGA
                     DGYLILPPYLVHGEQEGLYQYAKTIIESTDLNAILYQRDNAVLSVEQIKRLTECEQLV
                     GVKDGVGNMDLNINLVYTIGDRLGWLNGMPMAEVTMPAYLPIGFHSYSSAISNYIPHI
                     SRMFYDALKNGNDELVKELYRHVILPINDIRKQRKGYAVSLIKAGMEIMGLNVRNTAR
                     PPVGPVEKDHYQQLEAILKQAADRFPKKAATV"
     misc_feature    267911..268777
                     /gene="ycbC"
                     /locus_tag="BSU02460"
                     /note="5-dehydro-4-deoxyglucarate dehydratase, also called
                     5-keto-4-deoxy-glucarate dehydratase (KDGDH); Region:
                     KDGDH; cd00951"
                     /db_xref="CDD:188638"
     misc_feature    order(268037..268042,268301..268303,268307..268309,
                     268376..268378,268451..268453)
                     /gene="ycbC"
                     /locus_tag="BSU02460"
                     /note="putative active site [active]"
                     /db_xref="CDD:188638"
     misc_feature    268376..268378
                     /gene="ycbC"
                     /locus_tag="BSU02460"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:188638"
     gene            268846..270312
                     /gene="ycbD"
                     /locus_tag="BSU02470"
                     /db_xref="GeneID:938406"
     CDS             268846..270312
                     /gene="ycbD"
                     /locus_tag="BSU02470"
                     /EC_number="1.2.1.26"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 12044674, 17202142; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase YcbD"
                     /protein_id="NP_388129.1"
                     /db_xref="GI:16077316"
                     /db_xref="GeneID:938406"
                     /translation="MSVITEQNTYLNFINGEWVKSQSGDMVKVENPADVNDIVGYVQN
                     STAEDVERAVTAANEAKTAWRKLTGAERGQYLYKTADIMEQRLEEIAACATREMGKTL
                     PEAKGETARGIAILRYYAGEGMRKTGDVIPSTDKDALMFTTRVPLGVVGVISPWNFPV
                     AIPIWKMAPALVYGNTVVIKPATETAVTCAKIIACFEEAGLPAGVINLVTGPGSVVGQ
                     GLAEHDGVNAVTFTGSNQVGKIIGQAALARGAKYQLEMGGKNPVIVADDADLEAAAEA
                     VITGAFRSTGQKCTATSRVIVQSGIYERFKEKLLQRTKDITIGDSLKEDVWMGPIASK
                     NQLDNCLSYIEKGKQEGASLLIGGEKLENGKYQNGYYVQPAIFDNVTSEMTIAQEEIF
                     GPVIALIKVDSIEEALNIANDVKFGLSASIFTENIGRMLSFIDEIDAGLVRINAESAG
                     VELQAPFGGMKQSSSHSREQGEAAKDFFTAIKTVFVKP"
     misc_feature    268873..270303
                     /gene="ycbD"
                     /locus_tag="BSU02470"
                     /note="Bacillus subtilis NADP+-dependent
                     alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like;
                     Region: ALDH_KGSADH-YcbD; cd07097"
                     /db_xref="CDD:143415"
     misc_feature    order(269302..269316,269338..269340,269383..269385,
                     269389..269394,269536..269547,269554..269556,
                     269563..269568,269608..269616,269710..269712,
                     270013..270015,270019..270021,270097..270099,
                     270214..270216)
                     /gene="ycbD"
                     /locus_tag="BSU02470"
                     /note="NAD(P) binding site [chemical binding]; other site"
                     /db_xref="CDD:143415"
     misc_feature    order(269314..269316,269608..269610,269701..269703,
                     269710..269712)
                     /gene="ycbD"
                     /locus_tag="BSU02470"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143415"
     gene            270396..271763
                     /gene="gudP"
                     /locus_tag="BSU02480"
                     /db_xref="GeneID:938413"
     CDS             270396..271763
                     /gene="gudP"
                     /locus_tag="BSU02480"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 12044674, 15849754,
                     16850406; Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate transporter"
                     /protein_id="NP_388130.2"
                     /db_xref="GI:255767062"
                     /db_xref="GeneID:938413"
                     /translation="MKKDFASVTPAGKKTSVRWFIVFMLFLVTSINYADRATLSITGD
                     SVQHDLGLDSVAMGYVFSAFGWAYVIGQLPGGWLLDRFGSKTIIALSIFFWSFFTLLQ
                     GAIGFFSAGTAIILLFALRFLVGLSEAPSFPGNGRVVASWFPSSERGTASAFFNSAQY
                     FAIVIFSPLMGWLTHSFGWHSVFVVMGIAGILLAVIWLKTVYEPKKHPKVNEAELAYI
                     EQGGGLISMDDSKSKQETESKWPYIKQLLTNRMLIGVYIAQYCITTLTYFFLTWFPVY
                     LVQARGMSILEAGFVASLPALCGFAGGVLGGIVSDILLKKGRSLTFARKVPIIAGMLL
                     SCSMIVCNYTDSAWLVVVIMSLAFFGKGFGALGWAVVSDTSPKECAGLSGGLFNTFGN
                     IASITTPIIIGYIVNATGSFNGALVFVGANAIAAILSYLLLVGPIKRVVLKKQEQDPD
                     QSLPV"
     misc_feature    270459..271691
                     /gene="gudP"
                     /locus_tag="BSU02480"
                     /note="The Major Facilitator Superfamily (MFS) is a large
                     and diverse group of secondary transporters that includes
                     uniporters, symporters, and antiporters. MFS proteins
                     facilitate the transport across cytoplasmic or internal
                     membranes of a variety of...; Region: MFS; cd06174"
                     /db_xref="CDD:119392"
     misc_feature    270474..271697
                     /gene="gudP"
                     /locus_tag="BSU02480"
                     /note="D-galactonate transporter; Region: 2A0114;
                     TIGR00893"
                     /db_xref="CDD:233174"
     misc_feature    order(270501..270503,270510..270518,270522..270527,
                     270576..270578,270585..270590,270597..270599,
                     270609..270614,270618..270623,270777..270782,
                     270789..270794,270801..270806,270813..270815,
                     270849..270854,270861..270866,270882..270884,
                     271182..271184,271191..271196,271203..271208,
                     271215..271217,271257..271259,271269..271271,
                     271281..271283,271290..271292,271302..271304,
                     271467..271469,271476..271481,271497..271502,
                     271509..271511,271542..271547,271554..271559,
                     271566..271571,271578..271580)
                     /gene="gudP"
                     /locus_tag="BSU02480"
                     /note="putative substrate translocation pore; other site"
                     /db_xref="CDD:119392"
     gene            271800..273167
                     /gene="gudD"
                     /locus_tag="BSU02490"
                     /db_xref="GeneID:938410"
     CDS             271800..273167
                     /gene="gudD"
                     /locus_tag="BSU02490"
                     /EC_number="4.2.1.40"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 12044674; Product type e:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="NP_388131.2"
                     /db_xref="GI:255767063"
                     /db_xref="GeneID:938410"
                     /translation="MSSPIQEQVQKEKRSNIPSISEMKVIPVAGHDSMLLNLSGAHSP
                     FFTRNIVILTDSSGNQGVGEVPGGEHIRRTLELSEPLVVGKSIGAYQAILQTVRKQFG
                     DQDRGGRGNQTFDLRTTVHAVTALEAALLDLLGKFLQEPVAALLGEGKQRDEVKMLGY
                     LFYIGDRNRTTLPYQSDEQSDCAWFRLRHEEALTPEAIVRLAESAQERYGFQDFKLKG
                     GVLRGEEEIEAVTALSKRFPEARITLDPNGAWSLEEAIALCKGKQDVLAYAEDPCGDE
                     NGYSAREVMAEFRRATGLPTATNMIATDWREMGHAIQLHAVDIPLADPHFWTMQGSVR
                     VAQMCHDWGLTWGSHSNNHFDISLAMFTHVAAAAPGRITAIDTHWIWQDGQRLTKQPF
                     EISSGCVKVPDKPGLGVDIDMEQVEKAHEIYRKMNLGARNDAIPMQFLISNWEFDRKR
                     PCLVR"
     misc_feature    271842..273164
                     /gene="gudD"
                     /locus_tag="BSU02490"
                     /note="glucarate dehydratase; Region: glucar-dehydr;
                     TIGR03247"
                     /db_xref="CDD:211799"
     misc_feature    271857..273077
                     /gene="gudD"
                     /locus_tag="BSU02490"
                     /note="D-Glucarate dehydratase (GlucD) catalyzes the
                     dehydration of both D-glucarate and L-idarate to form
                     5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction
                     of the catabolic pathway for (D)-glucarate. GlucD belongs
                     to the enolase superfamily of enzymes; Region:
                     D-glucarate_dehydratase; cd03323"
                     /db_xref="CDD:239439"
     misc_feature    order(271908..271910,271923..271925,272277..272279,
                     272442..272444,272448..272450,272532..272534,
                     272538..272540,272607..272609,272694..272696,
                     272844..272852,272931..272933)
                     /gene="gudD"
                     /locus_tag="BSU02490"
                     /note="active site"
                     /db_xref="CDD:239439"
     misc_feature    order(272070..272075,272082..272084,272208..272213,
                     272229..272240,272643..272648,272658..272660,
                     272664..272669,272712..272717,272727..272729,
                     272799..272801,272808..272810,272820..272831)
                     /gene="gudD"
                     /locus_tag="BSU02490"
                     /note="tetramer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:239439"
     gene            273237..273938
                     /gene="ycbG"
                     /locus_tag="BSU02500"
                     /db_xref="GeneID:938411"
     CDS             273237..273938
                     /gene="ycbG"
                     /locus_tag="BSU02500"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 12044674; Product type r:
                     regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="NP_388132.2"
                     /db_xref="GI:255767064"
                     /db_xref="GeneID:938411"
                     /translation="MYEGLEDLKVDTVNRKTLAKQVIERIVHLLSSGQLRAGDKLPTE
                     MELMDILHVSRPVLREALSSLETLGVITRKTRGGTYFNDKIGMQPFSVMLALATDNLP
                     AIIEARMALELGLVTIAAEKINEEELQRLQKTIDDIANSTDNHYGEADKEFHRIIALS
                     ANNPVVEGMIQSLLITHAKIDSQIPYRERDVTVEYHKKIYDALAKRDPYKAHYHMYEH
                     LKFVRDKILKGMDEK"
     misc_feature    273258..273932
                     /gene="ycbG"
                     /locus_tag="BSU02500"
                     /note="Transcriptional regulators [Transcription]; Region:
                     FadR; COG2186"
                     /db_xref="CDD:225097"
     misc_feature    273285..273476
                     /gene="ycbG"
                     /locus_tag="BSU02500"
                     /note="Winged helix-turn-helix (WHTH) DNA-binding domain
                     of the GntR family of transcriptional regulators; Region:
                     WHTH_GntR; cd07377"
                     /db_xref="CDD:153418"
     misc_feature    order(273285..273287,273291..273293,273360..273362,
                     273366..273371,273393..273407,273411..273416,
                     273423..273425,273453..273458,273462..273473)
                     /gene="ycbG"
                     /locus_tag="BSU02500"
                     /note="DNA-binding site [nucleotide binding]; DNA binding
                     site"
                     /db_xref="CDD:153418"
     misc_feature    273546..273893
                     /gene="ycbG"
                     /locus_tag="BSU02500"
                     /note="This entry represents the C-terminal ligand binding
                     domain of many members of the GntR family; Region: FCD;
                     smart00895"
                     /db_xref="CDD:214892"
     gene            274029..275561
                     /gene="garD"
                     /locus_tag="BSU02510"
                     /db_xref="GeneID:938407"
     CDS             274029..275561
                     /gene="garD"
                     /locus_tag="BSU02510"
                     /EC_number="4.2.1.42"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2b: Function of strongly homologous gene;
                     PubMedId: 9772162; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="D-galactarate dehydratase"
                     /protein_id="NP_388133.2"
                     /db_xref="GI:255767065"
                     /db_xref="GeneID:938407"
                     /translation="MAMNLRKNQAPLYIKVHEIDNTAIIVNDGGLPKGTVFSCGLVLE
                     EDVPQGHKVALTDLNQGDEIVRYGEVIGFADETIKRGSWIREALVRMPAPPALDDLPL
                     ANRVPQPRPPLEGYTFEGYRNADGSAGTKNILGITTSVQCVVGVLDYAVKRIKEELLP
                     KYPNVDDVVPLHHQYGCGVAINAPDAVIPIRTIQNLAKHPNFGGEVMVIGLGCEKLLP
                     ERIASENDDDILSLQDHRGFAAMIQSILEMAEERLIRLNSRTRVSCPVSDLVIGLQCG
                     GSDAFSGVTANPAVGYAADLLVRAGATVLFSEVTEVRDAIHLLTPRAVSEEVGQSLIK
                     EMKWYDSYLRRGDADRSANPSPGNKKGGLSNVVEKALGSVAKSGTSPISGVLGPGERA
                     KQKGLLFAATPASDFVCGTLQLAAGMNLQVFTTGRGTPYGLAAAPVLKVSTRHSLSEH
                     WADLIDINAGRIATGEASIEDVGWEIFRTILDVASGRKQTWADRWGLHNDLCLFNPAP
                     VT"
     misc_feature    274062..275558
                     /gene="garD"
                     /locus_tag="BSU02510"
                     /note="galactarate dehydratase; Region: galactar-dH20;
                     TIGR03248"
                     /db_xref="CDD:188300"
     misc_feature    274065..274280
                     /gene="garD"
                     /locus_tag="BSU02510"
                     /note="Domains similar to fish antifreeze type III
                     protein; Region: SAF_AH_GD; cd11613"
                     /db_xref="CDD:212158"
     misc_feature    274368..275558
                     /gene="garD"
                     /locus_tag="BSU02510"
                     /note="D-galactarate dehydratase / Altronate hydrolase, C
                     terminus; Region: GD_AH_C; pfam04295"
                     /db_xref="CDD:252510"
     gene            275838..276758
                     /gene="ycbJ"
                     /locus_tag="BSU02520"
                     /db_xref="GeneID:938408"
     CDS             275838..276758
                     /gene="ycbJ"
                     /locus_tag="BSU02520"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 12044674; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388134.1"
                     /db_xref="GI:16077321"
                     /db_xref="GeneID:938408"
                     /translation="MTNLNEKQLITEIVGLARSQGLTVHSENAQLNETGMDFQVVFAK
                     DDTGMPWVLRKPRRSDVVERASAEGITLAFLRANLTADVPDWRIHTPELIAYPMLKGT
                     PAAGIDLEQKQYVWNMDHQPPSDDFVRTLADILAELHGTDQISAGQSGIEVIRPEDFR
                     QMTADSMVDVKNKLGVSTTLWERWQKWVDDDAYWPGFSSLIHGDLHPPHILIDQNGRV
                     TGLLDWTEAKVADPAKDFVLYQTIFGEKETARLLEYYDQAGGRIWAKMQEHISEMQAA
                     YPVEIAKLALQTQQEEHINMALEALGVTSD"
     misc_feature    275877..276704
                     /gene="ycbJ"
                     /locus_tag="BSU02520"
                     /note="Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is
                     part of a larger superfamily that includes the catalytic
                     domains of other kinases, such as the typical
                     serine/threonine/tyrosine protein kinases (PKs), RIO
                     kinases, actin-fragmin kinase; Region: MPH2';
                     cd05152"
                     /db_xref="CDD:240173"
     misc_feature    order(275925..275927,275955..275957,275991..275993,
                     275997..275999,276075..276077,276123..276134,
                     276447..276449,276459..276464,276468..276470,
                     276501..276506,276561..276563)
                     /gene="ycbJ"
                     /locus_tag="BSU02520"
                     /note="putative active site [active]"
                     /db_xref="CDD:240173"
     misc_feature    order(275925..275927,276447..276449,276561..276563)
                     /gene="ycbJ"
                     /locus_tag="BSU02520"
                     /note="putative substrate binding site [chemical binding];
                     other site"
                     /db_xref="CDD:240173"
     misc_feature    275940..276644
                     /gene="ycbJ"
                     /locus_tag="BSU02520"
                     /note="Phosphotransferase enzyme family; Region: APH;
                     pfam01636"
                     /db_xref="CDD:250760"
     misc_feature    order(275955..275957,275991..275993,275997..275999,
                     276075..276077,276123..276134,276447..276449,
                     276459..276464,276468..276470,276501..276506)
                     /gene="ycbJ"
                     /locus_tag="BSU02520"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:240173"
     gene            276815..277062
                     /locus_tag="BSU_misc_RNA_6"
                     /db_xref="GeneID:8303216"
     misc_RNA        276815..277062
                     /locus_tag="BSU_misc_RNA_6"
                     /product="T-box"
                     /inference="profile:Rfam:8.1"
                     /db_xref="GeneID:8303216"
     gene            277160..277321
                     /gene="rtpA"
                     /locus_tag="BSU02530"
                     /db_xref="GeneID:938403"
     CDS             277160..277321
                     /gene="rtpA"
                     /locus_tag="BSU02530"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10706627, 11557884,
                     12855807, 15099736, 15213402, 15743934, 16306262; Product
                     type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan RNA-binding attenuator protein
                     inhibitory protein"
                     /protein_id="NP_388135.1"
                     /db_xref="GI:16077322"
                     /db_xref="GeneID:938403"
                     /translation="MVIATDDLEVACPKCERAGEIEGTPCPACSGKGVILTAQGYTLL
                     DFIQKHLNK"
     misc_feature    277163..277318
                     /gene="rtpA"
                     /locus_tag="BSU02530"
                     /note="anti-TRAP (AT) protein specific to Bacilli; Region:
                     anti-TRAP; cd10748"
                     /db_xref="CDD:199910"
     misc_feature    order(277163..277189,277196..277198,277241..277243,
                     277253..277255,277262..277279,277283..277291,
                     277295..277318)
                     /gene="rtpA"
                     /locus_tag="BSU02530"
                     /note="dodecamer interface 2 [polypeptide binding]; other
                     site"
                     /db_xref="CDD:199910"
     misc_feature    order(277163..277174,277181..277186,277229..277240,
                     277247..277249,277253..277255,277259..277261,
                     277265..277267,277271..277285,277289..277318)
                     /gene="rtpA"
                     /locus_tag="BSU02530"
                     /note="dodecamer interface 1 [polypeptide binding]; other
                     site"
                     /db_xref="CDD:199910"
     misc_feature    order(277163..277171,277178..277186,277253..277255,
                     277265..277267,277274..277279,277283..277291,
                     277295..277312)
                     /gene="rtpA"
                     /locus_tag="BSU02530"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:199910"
     misc_feature    order(277175..277180,277187..277189,277196..277201,
                     277238..277243,277262..277276,277280..277285)
                     /gene="rtpA"
                     /locus_tag="BSU02530"
                     /note="TRAP binding interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:199910"
     misc_feature    order(277193..277195,277202..277204,277235..277237,
                     277244..277246)
                     /gene="rtpA"
                     /locus_tag="BSU02530"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:199910"
     gene            277342..278280
                     /gene="ycbK"
                     /locus_tag="BSU02540"
                     /db_xref="GeneID:938405"
     CDS             277342..278280
                     /gene="ycbK"
                     /locus_tag="BSU02540"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 10706627, 15063849, 15849754,
                     16850406, 16879415, 17114263; Product type pt :
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="NP_388136.1"
                     /db_xref="GI:16077323"
                     /db_xref="GeneID:938405"
                     /translation="MRAEEQSKIREAAAGTIFLLIGTVCFASKSIWIKWAYQMGAEPD
                     AVLLYRQLLAVPLFWLIFLIYRPPMPDGKKKGDLWKACGAGVFCFFLSPLLDFIGLNH
                     VSAMVERILLMSYPLFVFGFTACRDRKMSSIQDLFAVLAVMFGLFLALGGWNAELFQA
                     NMIGAVFILLSSAVYAGYLVLSGHLVHQIGGIRLNAYGMTAAGAAMMLYTGIKSAAGM
                     NTPMAAYPLSMYGLFAVIAVVTTVIPFVLMLEGIKRIGAQRAAAISMAGPILTIFYGA
                     LFLGERLGLIQVIGCGGVFFVITGMEYRKLKTGKKE"
     misc_feature    277363..278256
                     /gene="ycbK"
                     /locus_tag="BSU02540"
                     /note="Permeases of the drug/metabolite transporter (DMT)
                     superfamily [Carbohydrate transport and metabolism / Amino
                     acid transport and metabolism / General function
                     prediction only]; Region: RhaT; COG0697"
                     /db_xref="CDD:223769"
     misc_feature    277861..278244
                     /gene="ycbK"
                     /locus_tag="BSU02540"
                     /note="EamA-like transporter family; Region: EamA;
                     pfam00892"
                     /db_xref="CDD:250209"
     gene            278377..279057
                     /gene="ycbL"
                     /locus_tag="BSU02550"
                     /db_xref="GeneID:938400"
     CDS             278377..279057
                     /gene="ycbL"
                     /locus_tag="BSU02550"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11717295; Product type r:
                     regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="NP_388137.2"
                     /db_xref="GI:255767066"
                     /db_xref="GeneID:938400"
                     /translation="MLVEDDHSISEMVDHYLTKEGFGIVHAFDGEEGIRLFQQGSYDL
                     VLLDIMLPKLNGMDFLKIIREKSNIPVLMISAKDGDVDKALGLGFGADDYIAKPFSMI
                     ELTARVKAAIRRATQYSAEEPAVNKVIRIHQLAIDIDNVSVLKNGEPLQLTSTEWQLL
                     CLFASNPKKVFTKEQIYRSVWNEEYFDDQNIINVHMRRLREKIEDDPSSPQYIKTLWG
                     IGYKLGEF"
     misc_feature    278377..278712
                     /gene="ycbL"
                     /locus_tag="BSU02550"
                     /note="Signal receiver domain; originally thought to be
                     unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
                     recently identified in eukaroytes ETR1 Arabidopsis
                     thaliana; this domain receives the signal from the sensor
                     partner in a two-component systems; Region: REC; cd00156"
                     /db_xref="CDD:238088"
     misc_feature    278380..279051
                     /gene="ycbL"
                     /locus_tag="BSU02550"
                     /note="Response regulators consisting of a CheY-like
                     receiver domain and a winged-helix DNA-binding domain
                     [Signal transduction mechanisms / Transcription]; Region:
                     OmpR; COG0745"
                     /db_xref="CDD:223816"
     misc_feature    order(278386..278391,278518..278520,278542..278544,
                     278599..278601,278656..278658,278665..278670)
                     /gene="ycbL"
                     /locus_tag="BSU02550"
                     /note="active site"
                     /db_xref="CDD:238088"
     misc_feature    278518..278520
                     /gene="ycbL"
                     /locus_tag="BSU02550"
                     /note="phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238088"
     misc_feature    order(278527..278532,278536..278544)
                     /gene="ycbL"
                     /locus_tag="BSU02550"
                     /note="intermolecular recognition site; other site"
                     /db_xref="CDD:238088"
     misc_feature    278665..278673
                     /gene="ycbL"
                     /locus_tag="BSU02550"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238088"
     misc_feature    278761..279045
                     /gene="ycbL"
                     /locus_tag="BSU02550"
                     /note="Effector domain of response regulator. Bacteria and
                     certain eukaryotes like protozoa and higher plants use
                     two-component signal transduction systems to detect and
                     respond to changes in the environment. The system consists
                     of a sensor histidine kinase and...; Region: trans_reg_C;
                     cd00383"
                     /db_xref="CDD:238225"
     misc_feature    order(278833..278835,278890..278895,278947..278949,
                     278956..278958,278980..278985,279019..279021,
                     279034..279036)
                     /gene="ycbL"
                     /locus_tag="BSU02550"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238225"
     gene            279059..279994
                     /gene="ycbM"
                     /locus_tag="BSU02560"
                     /db_xref="GeneID:938397"
     CDS             279059..279994
                     /gene="ycbM"
                     /locus_tag="BSU02560"
                     /function="16.3: Control"
                     /function="16.12: Sense"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11717295; Product type
                     rc: receptor"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="NP_388138.2"
                     /db_xref="GI:255767067"
                     /db_xref="GeneID:938397"
                     /translation="MTVLWVAAVIALACLNVIQFIMKKKRDGNLAYTADQLSYMLSRD
                     SAGQILLPTDDHALKDLLVNINLIVENRQQISAQFAKTEQSMKRMLTNMSHDLKTPLT
                     VILGYIEAIQSDPNMPDEERERLLGKLRQKTNELIQMINSFFDLAKLESEDKEIPITK
                     VHMNDICKRNILHYYDAVQSKGFQAAIDIPDTPVYAQANEEALDRILQNLLSNAIQYG
                     AAGKLIGLTLSYDERNIAITVWDRGKGISETDQQRVFERLYTLEESRNKAFQGSGLGL
                     TITKRLTEKMGGIISVQSKPYERTAFTITLKRMTY"
     misc_feature    <279230..279982
                     /gene="ycbM"
                     /locus_tag="BSU02560"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; Region: BaeS; COG0642"
                     /db_xref="CDD:223715"
     misc_feature    279305..279502
                     /gene="ycbM"
                     /locus_tag="BSU02560"
                     /note="Histidine Kinase A (dimerization/phosphoacceptor)
                     domain; Histidine Kinase A dimers are formed through
                     parallel association of 2 domains creating 4-helix
                     bundles; usually these domains contain a conserved His
                     residue and are activated via...; Region: HisKA; cd00082"
                     /db_xref="CDD:119399"
     misc_feature    order(279323..279325,279335..279337,279347..279349,
                     279356..279358,279368..279370,279377..279379,
                     279431..279433,279443..279445,279452..279454,
                     279464..279466,279473..279475,279485..279487)
                     /gene="ycbM"
                     /locus_tag="BSU02560"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:119399"
     misc_feature    279341..279343
                     /gene="ycbM"
                     /locus_tag="BSU02560"
                     /note="phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:119399"
     misc_feature    279665..279976
                     /gene="ycbM"
                     /locus_tag="BSU02560"
                     /note="Histidine kinase-like ATPases; This family includes
                     several ATP-binding proteins for example: histidine
                     kinase, DNA gyrase B, topoisomerases, heat shock protein
                     HSP90, phytochrome-like ATPases and DNA mismatch repair
                     proteins; Region: HATPase_c; cd00075"
                     /db_xref="CDD:238030"
     misc_feature    order(279683..279685,279695..279697,279704..279706,
                     279773..279775,279779..279781,279785..279787,
                     279791..279796,279875..279886,279932..279934,
                     279938..279940,279953..279958,279962..279964)
                     /gene="ycbM"
                     /locus_tag="BSU02560"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:238030"
     misc_feature    279695..279697
                     /gene="ycbM"
                     /locus_tag="BSU02560"
                     /note="Mg2+ binding site [ion binding]; other site"
                     /db_xref="CDD:238030"
     misc_feature    order(279785..279787,279791..279793,279875..279877,
                     279881..279883)
                     /gene="ycbM"
                     /locus_tag="BSU02560"
                     /note="G-X-G motif; other site"
                     /db_xref="CDD:238030"
     gene            280086..281009
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /db_xref="GeneID:938404"
     CDS             280086..281009
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 12486040; Product type pt :
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="NP_388139.2"
                     /db_xref="GI:255767068"
                     /db_xref="GeneID:938404"
                     /translation="MTYIVQTNGLTKTYQGKEVVSNVSMHIKKGEIYGFLGPNGAGKT
                     TIMKMLTSLVKPTSGEIIILGNKFTHTSYEVLGNIGSMIEYPIFYENLTAEENLDLHC
                     EYMGYHNKKAIQEVLDMVNLKQIDKKPVKTFSLGMKQRLGIARAILTKPDLLILDEPV
                     NGLDPLGIKKIRQLFQVLSKEYGMTLLISSHLLGEIEQIADTIGVIRDGRLLEEVSME
                     DVRGQNTEYIELVTPNQTRACFVLEKELQLTNFKILNEKTIRIYEAEASQAAISKALI
                     LNDVDIESMNKKYTSLEDYFIKLINGNSISA"
     misc_feature    280086..280991
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; Region: CcmA; COG1131"
                     /db_xref="CDD:224054"
     misc_feature    280098..280727
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /note="ATP-binding cassette domain of the
                     bacitracin-resistance transporter; Region:
                     ABC_BcrA_bacitracin_resist; cd03268"
                     /db_xref="CDD:213235"
     misc_feature    280194..280217
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /note="Walker A/P-loop; other site"
                     /db_xref="CDD:213235"
     misc_feature    order(280203..280208,280212..280220,280335..280337,
                     280554..280559,280656..280658)
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:213235"
     misc_feature    280326..280337
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /note="Q-loop/lid; other site"
                     /db_xref="CDD:213235"
     misc_feature    280482..280511
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /note="ABC transporter signature motif; other site"
                     /db_xref="CDD:213235"
     misc_feature    280542..280559
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /note="Walker B; other site"
                     /db_xref="CDD:213235"
     misc_feature    280566..280577
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /note="D-loop; other site"
                     /db_xref="CDD:213235"
     misc_feature    280644..280664
                     /gene="ycbN"
                     /locus_tag="BSU02570"
                     /note="H-loop/switch region; other site"
                     /db_xref="CDD:213235"
     gene            281028..281714
                     /gene="ycbO"
                     /locus_tag="BSU02580"
                     /db_xref="GeneID:938401"
     CDS             281028..281714
                     /gene="ycbO"
                     /locus_tag="BSU02580"
                     /function="16.1: Circulate"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388140.3"
                     /db_xref="GI:255767069"
                     /db_xref="GeneID:938401"
                     /translation="MNLIRIELRKMKMGWYIRGALIANVIIMGFMWLISYSEKADGGV
                     SFQSTDEAFLIIGTFVRAVFIVFGAVLIVKLVISEYKNKTILVMFTYPISRKKLLTAK
                     LMIAGGLTFITILLSNILIAAGFFWLNSICHFIPGELTSEIISQQAVKMAVFAFGAAG
                     TSLVPIFFGMRRHSVPATIISSVVIVMLISSTSPGFSISSVVYIPLSLAAFGLFFSYM
                     AIRNADKQDA"
     misc_feature    281028..>281399
                     /gene="ycbO"
                     /locus_tag="BSU02580"
                     /note="ABC-type transport system involved in multi-copper
                     enzyme maturation, permease component [General function
                     prediction only]; Region: NosY; COG1277"
                     /db_xref="CDD:224196"
     gene            complement(281769..282155)
                     /gene="ycbP"
                     /locus_tag="BSU02590"
                     /db_xref="GeneID:938402"
     CDS             complement(281769..282155)
                     /gene="ycbP"
                     /locus_tag="BSU02590"
                     /function="16.13: Shape"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pm:
                     membrane component"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388141.1"
                     /db_xref="GI:16077328"
                     /db_xref="GeneID:938402"
                     /translation="MTHVKALAIKGIMTIIVLYLVLGLGFGFTFGDTLLMTIVLGVIS
                     YLLGDLYVLPKWNNMIATLADFGLAFLVIWLMGMPLSMGMTGGEVALAALFGAIVMAI
                     GEYCFHFYMMSKEIGKKHYLETRTDS"
     misc_feature    complement(281799..282155)
                     /gene="ycbP"
                     /locus_tag="BSU02590"
                     /note="Protein of unknown function (DUF2512); Region:
                     DUF2512; pfam10710"
                     /db_xref="CDD:256130"
     gene            282469..282897
                     /gene="cwlJ"
                     /locus_tag="BSU02600"
                     /db_xref="GeneID:938399"
     CDS             282469..282897
                     /gene="cwlJ"
                     /locus_tag="BSU02600"
                     /function="16.3: Control"
                     /function="16.5: Explore"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11466292, 11807087,
                     12177332, 16936016, 9515903; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase CwlJ"
                     /protein_id="NP_388142.2"
                     /db_xref="GI:255767070"
                     /db_xref="GeneID:938399"
                     /translation="MAVVRATSADVDLMARLLRAEAEGEGKQGMLLVGNVGINRLRAN
                     CSDFKGLRTIRQMIYQPHAFEAVTHGYFYQRARDSERALARRSINGERRWPAKFSLWY
                     FRPQGDCPAQWYNQPFVARFKSHCFYQPTAETCENVYNTF"
     misc_feature    <282469..282876
                     /gene="cwlJ"
                     /locus_tag="BSU02600"
                     /note="Cell wall hydrolyses involved in spore germination
                     [Cell envelope biogenesis, outer membrane]; Region: SleB;
                     COG3773"
                     /db_xref="CDD:226296"
     misc_feature    282535..282855
                     /gene="cwlJ"
                     /locus_tag="BSU02600"
                     /note="Cell Wall Hydrolase; Region: Hydrolase_2;
                     pfam07486"
                     /db_xref="CDD:254227"
     gene            283003..283734
                     /gene="ycbR"
                     /locus_tag="BSU02610"
                     /db_xref="GeneID:938394"
     CDS             283003..283734
                     /gene="ycbR"
                     /locus_tag="BSU02610"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388143.2"
                     /db_xref="GI:255767071"
                     /db_xref="GeneID:938394"
                     /translation="MATIDLQKKSVKIVLEKKQLTKVTARVGLVLDITGSMRPLYKNG
                     TVQNVVERILAVADQFDDNGLLDVWVYDNEFSRLKPVSEKDFSGYVDREILNNDRLHK
                     FGRNDEPPVMKDVLRKYVTEEPSSYPAFIVFINDGGCKKSIKPIIEASSDKPVFWQFV
                     GIGNGNFDFLNKLDTLEGRVIDNTNFLHIEEIDRISDDELYDALLAEFPFWLKEAKEK
                     GIVREQEPPAEKPKKKGFFSRLFSK"
     misc_feature    283075..283539
                     /gene="ycbR"
                     /locus_tag="BSU02610"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; Region: vWFA;
                     cd00198"
                     /db_xref="CDD:238119"
     misc_feature    order(283096..283098,283315..283317,283408..283410)
                     /gene="ycbR"
                     /locus_tag="BSU02610"
                     /note="metal ion-dependent adhesion site (MIDAS); other
                     site"
                     /db_xref="CDD:238119"
     gene            283816..283992
                     /gene="yczK"
                     /locus_tag="BSU02619"
                     /db_xref="GeneID:8302909"
     CDS             283816..283992
                     /gene="yczK"
                     /locus_tag="BSU02619"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 6: Doubtful CDS"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003097673.1"
                     /db_xref="GI:255767072"
                     /db_xref="GeneID:8302909"
                     /translation="MGGLQTTGYAENASFSQLSACFSSRLVREDLFLMFSAYNQFTLL
                     HSRLTMISYNGDDQ"
     gene            284011..285762
                     /gene="phoD"
                     /locus_tag="BSU02620"
                     /db_xref="GeneID:938391"
     CDS             284011..285762
                     /gene="phoD"
                     /locus_tag="BSU02620"
                     /EC_number="3.1.4.1"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11719524, 12867413,
                     16698798; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D"
                     /protein_id="NP_388144.2"
                     /db_xref="GI:255767073"
                     /db_xref="GeneID:938391"
                     /translation="MAYDSRFDEWVQKLKEESFQNNTFDRRKFIQGAGKIAGLSLGLT
                     IAQSVGAFEVNAAPNFSSYPFTLGVASGDPLSDSVVLWTRLAPDPLNGGGMPKQAVPV
                     KWEVAKDEHFRKIVRKGTEMAKPSLAHSVHVEADGLEPNKVYYYRFKTGHELSPVGKT
                     KTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYV
                     SKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANK
                     IPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDT
                     RQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSSTAHWNVLAQQIFFAK
                     WNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFE
                     KTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDYRGYVRCTVTPHQW
                     KADYRVMPFVTEPGAAISTRASFVYQKDQTGLRKVSSTTIQGGVKQSDEVEEDRFFSH
                     NKAHEKQMIKKRAKITN"
     misc_feature    284074..285627
                     /gene="phoD"
                     /locus_tag="BSU02620"
                     /note="Phosphodiesterase/alkaline phosphatase D [Inorganic
                     ion transport and metabolism]; Region: PhoD; COG3540"
                     /db_xref="CDD:226070"
     misc_feature    284530..285408
                     /gene="phoD"
                     /locus_tag="BSU02620"
                     /note="Bacillus subtilis PhoD and related proteins,
                     metallophosphatase domain; Region: MPP_PhoD; cd07389"
                     /db_xref="CDD:163632"
     misc_feature    order(284548..284550,284554..284556,284629..284631,
                     284806..284811,285013..285015,285316..285318,
                     285322..285324)
                     /gene="phoD"
                     /locus_tag="BSU02620"
                     /note="putative active site [active]"
                     /db_xref="CDD:163632"
     misc_feature    order(284548..284550,284554..284556,284629..284631,
                     284806..284808,285013..285015,285316..285318,
                     285322..285324)
                     /gene="phoD"
                     /locus_tag="BSU02620"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:163632"
     gene            285775..285987
                     /gene="tatAD"
                     /locus_tag="BSU02630"
                     /db_xref="GeneID:938398"
     CDS             285775..285987
                     /gene="tatAD"
                     /locus_tag="BSU02630"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 12867413, 15554971, 16678787, 19049517; Product
                     type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatAd"
                     /protein_id="NP_388145.2"
                     /db_xref="GI:255767074"
                     /db_xref="GeneID:938398"
                     /translation="MFSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSAT
                     KSLVSGDEKEEKSAELTAVKQDKNAG"
     misc_feature    285775..285951
                     /gene="tatAD"
                     /locus_tag="BSU02630"
                     /note="twin arginine translocase protein A; Provisional;
                     Region: tatA; PRK14861"
                     /db_xref="CDD:237837"
     gene            286048..286776
                     /gene="tatCD"
                     /locus_tag="BSU02640"
                     /db_xref="GeneID:938395"
     CDS             286048..286776
                     /gene="tatCD"
                     /locus_tag="BSU02640"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 16698798, 19049517;
                     Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatCd"
                     /protein_id="NP_388146.2"
                     /db_xref="GI:255767075"
                     /db_xref="GeneID:938395"
                     /translation="MDKKETHLIGHLEELRRRIIVTLAAFFLFLITAFLFVQDIYDWL
                     IRDLDGKLAVLGPSEILWVYMMLSGICAIAASIPVAAYQLWRFVAPALTKTERKVTLM
                     YIPGLFALFLAGISFGYFVLFPIVLSFLTHLSSGHFETMFTADRYFRFMVNLSLPFGF
                     LFEMPLVVMFLTRLGILNPYRLAKARKLSYFLLIVVSILITPPDFISDFLVMIPLLVL
                     FEVSVTLSAFVYKKRMREETAAAA"
     misc_feature    286048..286773
                     /gene="tatCD"
                     /locus_tag="BSU02640"
                     /note="Sec-independent protein secretion pathway component
                     TatC [Intracellular trafficking and secretion]; Region:
                     TatC; COG0805"
                     /db_xref="CDD:223876"
     gene            complement(286773..287420)
                     /gene="pcp"
                     /locus_tag="BSU02650"
                     /db_xref="GeneID:938396"
     CDS             complement(286773..287420)
                     /gene="pcp"
                     /locus_tag="BSU02650"
                     /EC_number="3.4.19.3"
                     /function="16.6: Maintain"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the removal of 5-oxoproline from various
                     penultimate amino acid residues except L-proline"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrrolidone-carboxylate peptidase"
                     /protein_id="NP_388147.1"
                     /db_xref="GI:16077334"
                     /db_xref="GeneID:938396"
                     /translation="MRKKVLITGFDPFDKETVNPSWEAAKRLNGFETEEAIITAEQIP
                     TVFRSALDTLRQAIQKHQPDIVICVGQAGGRMQITPERVAINLADARIPDNEGHQPID
                     EEISPDGPAAYWTRLPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHISRTSP
                     HIRGGFIHIPYIPQQTIDKTAPSLSLDTIVRALRIAAVTAAQYDEDVKSPGGTLH"
     misc_feature    complement(286833..287414)
                     /gene="pcp"
                     /locus_tag="BSU02650"
                     /note="Pyroglutamyl peptidase (PGP) type I, also known as
                     pyrrolidone carboxyl peptidase (pcp) type I:  Enzymes
                     responsible for cleaving pyroglutamate (pGlu) from the
                     N-terminal end of specialized proteins. The N-terminal
                     pGlu protects these proteins from...; Region:
                     Peptidase_C15; cd00501"
                     /db_xref="CDD:238279"
     misc_feature    complement(order(286989..286997,287286..287288,
                     287382..287384,287391..287393))
                     /gene="pcp"
                     /locus_tag="BSU02650"
                     /note="putative substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:238279"
     misc_feature    complement(order(286866..286868,286872..286877,
                     286893..286895,286899..286904,287019..287033,
                     287040..287042,287190..287198))
                     /gene="pcp"
                     /locus_tag="BSU02650"
                     /note="AC domain interface; other site"
                     /db_xref="CDD:238279"
     misc_feature    complement(order(286917..286919,286989..286991,
                     287178..287180))
                     /gene="pcp"
                     /locus_tag="BSU02650"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238279"
     misc_feature    complement(order(286998..287000,287007..287012,
                     287061..287063,287079..287090,287115..287120,
                     287148..287150,287154..287156,287160..287162,
                     287172..287177))
                     /gene="pcp"
                     /locus_tag="BSU02650"
                     /note="AB domain interface; other site"
                     /db_xref="CDD:238279"
     misc_feature    complement(286866..286868)
                     /gene="pcp"
                     /locus_tag="BSU02650"
                     /note="interchain disulfide; other site"
                     /db_xref="CDD:238279"
     gene            287499..288611
                     /gene="ycbU"
                     /locus_tag="BSU02660"
                     /db_xref="GeneID:938393"
     CDS             287499..288611
                     /gene="ycbU"
                     /locus_tag="BSU02660"
                     /EC_number="2.8.1.7"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase YcbU"
                     /protein_id="NP_388148.2"
                     /db_xref="GI:255767076"
                     /db_xref="GeneID:938393"
                     /translation="MEHLPEQYRQLFPTLQTHTMLASCSQSALAEPVSRAIQDYYDSL
                     LYKGTNWKEAIEKTEFARNEFAKLIGAEPDEVAIVPSVSDALVSVASSLTAFGKKHVV
                     YTDMDFPAVPHVWQAHSDYTVSVIPSIDGVLPLEQYETHISDETVLTCVPHVHYRDGY
                     VQDIKAIAEISQRKGSLLFVDAYQSAGHIPIDVKEWGVDMLAAGTRKYLLGIPGVAFL
                     YVRKELADALKPKASAWFGRESGFDGAYAKVARRFQTGTPAFISVYAAAAALSLLNHI
                     GVSHIRDHVKTICADAVQYAAEKGLQLAAAQGGIQPGMVAIRDERASETAGLLKKKKV
                     ICAPRENVIRLAPHFYNTKEEMRHAIDEIAAKTIHK"
     misc_feature    287511..288593
                     /gene="ycbU"
                     /locus_tag="BSU02660"
                     /note="Selenocysteine lyase/Cysteine desulfurase
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: csdA; COG0520"
                     /db_xref="CDD:223594"
     misc_feature    order(287742..287747,287754..287756,287955..287957,
                     288039..288041,288048..288050,288108..288110,
                     288117..288119)
                     /gene="ycbU"
                     /locus_tag="BSU02660"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:99742"
     misc_feature    288117..288119
                     /gene="ycbU"
                     /locus_tag="BSU02660"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99742"
     gene            complement(288653..290092)
                     /gene="lmrB"
                     /locus_tag="BSU02670"
                     /db_xref="GeneID:938388"
     CDS             complement(288653..290092)
                     /gene="lmrB"
                     /locus_tag="BSU02670"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15317768, 15849754,
                     16850406; Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="lincomycin resistance protein LmrB"
                     /protein_id="NP_388149.1"
                     /db_xref="GI:16077336"
                     /db_xref="GeneID:938388"
                     /translation="MILETTAKASQQYKVMPIMISLLLAGFIGMFSETALNIALTDLM
                     KELNITAATVQWLTTGYLLVLGILVPVSGLLLQWFTTRQLFTVSLIFSILGTFIAALA
                     PSFSFLLAARIVQALGTGLLLPLMFNTILVIFPPHKRGAAMGTIGLVIMFAPAIGPTF
                     SGLVLEHLNWHWIFWISLPFLVLALVFGIAYMQNVSETTKPKIDVLSIILSTIGFGGI
                     VFGFSNAGEGSGGWSSPTVIVSLIVGVVGLILFSIRQLTMKQPMMNLRAFKYPMFILG
                     VIMVFICMMVILSSMLLLPMYLQGGLVLTAFASGLVLLPGGILNGFMSPVTGRLFDKY
                     GPKWLVIPGFVIVTVVLWFFSNVTTTSTAVLIIILHTCLMIGISMIMMPAQTNGLNQL
                     PREFYPDGTAIMNTLQQMAGAIGTAVAVSIMAAGQHDYMSTVKNPADPAVIPQALTAG
                     VQHAFVFAMIVAIIGLIGAFFMKRVKVDH"
     misc_feature    complement(289148..290038)
                     /gene="lmrB"
                     /locus_tag="BSU02670"
                     /note="The Major Facilitator Superfamily (MFS) is a large
                     and diverse group of secondary transporters that includes
                     uniporters, symporters, and antiporters. MFS proteins
                     facilitate the transport across cytoplasmic or internal
                     membranes of a variety of...; Region: MFS; cd06174"
                     /db_xref="CDD:119392"
     misc_feature    complement(288845..290029)
                     /gene="lmrB"
                     /locus_tag="BSU02670"
                     /note="Major Facilitator Superfamily; Region: MFS_1;
                     pfam07690"
                     /db_xref="CDD:254360"
     misc_feature    complement(order(289148..289150,289160..289162,
                     289169..289174,289181..289183,289337..289339,
                     289349..289351,289358..289360,289370..289372,
                     289382..289384,289424..289426,289433..289438,
                     289445..289450,289457..289459,289631..289633,
                     289649..289654,289661..289666,289700..289702,
                     289709..289714,289721..289726,289733..289738,
                     289874..289879,289883..289888,289898..289900,
                     289907..289912,289919..289921,289970..289975,
                     289979..289987,289994..289996))
                     /gene="lmrB"
                     /locus_tag="BSU02670"
                     /note="putative substrate translocation pore; other site"
                     /db_xref="CDD:119392"
     gene            complement(290132..290698)
                     /gene="lmrA"
                     /locus_tag="BSU02680"
                     /db_xref="GeneID:938385"
     CDS             complement(290132..290698)
                     /gene="lmrA"
                     /locus_tag="BSU02680"
                     /function="16.3: Control"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 12718394, 15317768,
                     17483215; Product type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="NP_388150.1"
                     /db_xref="GI:16077337"
                     /db_xref="GeneID:938385"
                     /translation="MSYGDSREKILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYY
                     HFPGGKEQLAIEAVNEMKEYIRQKIADCMEACTDPAEGIQAFLKELSCQFSCTEDIEG
                     LPVGLLAAETSLKSEPLREACHEAYKEWASVYEEKLRQTGCSESRAKEASTVVNAMIE
                     GGILLSLTAKNSTPLLHISSCIPDLLKR"
     misc_feature    complement(290198..290686)
                     /gene="lmrA"
                     /locus_tag="BSU02680"
                     /note="Transcriptional regulator [Transcription]; Region:
                     AcrR; COG1309"
                     /db_xref="CDD:224228"
     misc_feature    complement(290528..290671)
                     /gene="lmrA"
                     /locus_tag="BSU02680"
                     /note="Bacterial regulatory proteins, tetR family; Region:
                     TetR_N; pfam00440"
                     /db_xref="CDD:249860"
     gene            290915..292042
                     /gene="ansZ"
                     /locus_tag="BSU02690"
                     /db_xref="GeneID:938392"
     CDS             290915..292042
                     /gene="ansZ"
                     /locus_tag="BSU02690"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11914346, 17686772;
                     Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="NP_388151.1"
                     /db_xref="GI:16077338"
                     /db_xref="GeneID:938392"
                     /translation="MKKQRMLVLFTALLFVFTGCSHSPETKESPKEKAQTQKVSSASA
                     SEKKDLPNIRILATGGTIAGADQSKTSTTEYKAGVVGVESLIEAVPEMKDIANVSGEQ
                     IVNVGSTNIDNKILLKLAKRINHLLASDDVDGIVVTHGTDTLEETAYFLNLTVKSDKP
                     VVIVGSMRPSTAISADGPSNLYNAVKVAGAPEAKGKGTLVVLNDRIASARYVTKTNTT
                     TTDTFKSEEMGFVGTIADDIYFNNEITRKHTKDTDFSVSNLDELPQVDIIYGYQNDGS
                     YLFDAAVKAGAKGIVFAGSGNGSLSDAAEKGADSAVKKGVTVVRSTRTGNGVVTPNQD
                     YAEKDLLASNSLNPQKARMLLMLALTKTNDPQKIQAYFNEY"
     misc_feature    291065..292021
                     /gene="ansZ"
                     /locus_tag="BSU02690"
                     /note="Type II (periplasmic) bacterial L-asparaginase;
                     Region: L-asparaginase_II; cd08964"
                     /db_xref="CDD:199208"
     misc_feature    order(291092..291097,291233..291241,291332..291340,
                     291410..291412,291554..291556,291809..291811)
                     /gene="ansZ"
                     /locus_tag="BSU02690"
                     /note="active site"
                     /db_xref="CDD:199208"
     misc_feature    order(291095..291097,291239..291253,291260..291262,
                     291338..291340,291350..291352,291416..291418,
                     291431..291439,291446..291451,291521..291526,
                     291536..291538,291542..291544,291554..291565,
                     291569..291571,291599..291607,291611..291613,
                     291617..291619,291629..291631,291635..291643,
                     291647..291652,291713..291715,291719..291721,
                     291725..291727,291737..291739,291743..291745,
                     291767..291769,291773..291775,291797..291805,
                     291809..291811,291815..291817,291878..291883,
                     291902..291907)
                     /gene="ansZ"
                     /locus_tag="BSU02690"
                     /note="homotetramer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:199208"
     misc_feature    order(291239..291253,291260..291262,291338..291343,
                     291347..291355,291554..291568,291707..291715,
                     291719..291721,291725..291727,291737..291739,
                     291743..291748,291755..291760,291767..291769,
                     291773..291775,291797..291805,291809..291817,
                     291878..291886,291893..291898,291956..291961,
                     291968..291970)
                     /gene="ansZ"
                     /locus_tag="BSU02690"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:199208"
     gene            292205..292843
                     /gene="estA"
                     /locus_tag="BSU02700"
                     /db_xref="GeneID:938389"
     CDS             292205..292843
                     /gene="estA"
                     /locus_tag="BSU02700"
                     /EC_number="3.1.1.3"
                     /function="16.8: Protect"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15812018, 18053819,
                     11029590, 8396026; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="lipase EstA"
                     /protein_id="NP_388152.1"
                     /db_xref="GI:16077339"
                     /db_xref="GeneID:938389"
                     /translation="MKFVKRRIIALVTILMLSVTSLFALQPSAKAAEHNPVVMVHGIG
                     GASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKV
                     DIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALPGTDPNQKILYTSIY
                     SSADMIVMNYLSRLDGARNVQIHGVGHIGLLYSSQVNSLIKEGLNGGGQNTN"
     misc_feature    292205..292840
                     /gene="estA"
                     /locus_tag="BSU02700"
                     /note="Predicted acetyltransferases and hydrolases with
                     the alpha/beta hydrolase fold [General function prediction
                     only]; Region: LipA; COG1075"
                     /db_xref="CDD:224001"
     misc_feature    292310..>292738
                     /gene="estA"
                     /locus_tag="BSU02700"
                     /note="Predicted hydrolases or acyltransferases
                     (alpha/beta hydrolase superfamily) [General function
                     prediction only]; Region: MhpC; COG0596"
                     /db_xref="CDD:223669"
     gene            complement(292881..293264)
                     /gene="yczC"
                     /locus_tag="BSU02710"
                     /db_xref="GeneID:938390"
     CDS             complement(292881..293264)
                     /gene="yczC"
                     /locus_tag="BSU02710"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pm:
                     membrane component"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388153.1"
                     /db_xref="GI:16077340"
                     /db_xref="GeneID:938390"
                     /translation="MELAGFMLRACALLLDVIIAAAVILAAGFTFGDGSAGVIIVAIL
                     MLIVYPLLMPLTNWKGTLGKKIIGLQIVRDETYKKISFPQAIVRYLIAWVHVFSRLIY
                     LTAAFTKKKQTVHDMAAKTIVLKAE"
     misc_feature    complement(292884..293264)
                     /gene="yczC"
                     /locus_tag="BSU02710"
                     /note="Predicted membrane protein/domain [Function
                     unknown]; Region: COG1714"
                     /db_xref="CDD:224628"
     gene            293499..294575
                     /gene="yccF"
                     /locus_tag="BSU02720"
                     /db_xref="GeneID:938387"
     CDS             293499..294575
                     /gene="yccF"
                     /locus_tag="BSU02720"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388154.1"
                     /db_xref="GI:16077341"
                     /db_xref="GeneID:938387"
                     /translation="MGKVKRNAPCPCGSGKKYKKCCGSKVVDFPAELAAKEAKQIQED
                     LVEYAFTVHRESISGFINQHDFLSAMDRQTKDISVFNLGIWGIFFHPLAGEKTIFEEY
                     LQKKGDSITRPKTREIVESWQSMTPALLLLKDLKEGIIHFEDVITAKQFEVEMDASNQ
                     DLPPVGSLILGYPIHEAEKAEFFMQFTIFPVKRTEALISKVKKYADAAVKDGKTPEDF
                     MKQEFNNVLFALLAEKDEEPQAEKAEVSTVEWANDLEKETAAAIEEGMSGEEYPTELI
                     PAVIDIWKTFCEKKSPVIRKPEAFAAAVEYYVNAISLNGASVSQAKLAKKYGVSASTI
                     SSRYKEIESTLQDEADRFAQALSS"
     misc_feature    293499..294251
                     /gene="yccF"
                     /locus_tag="BSU02720"
                     /note="Predicted metal-binding protein related to the
                     C-terminal domain of SecA [General function prediction
                     only]; Region: COG3318"
                     /db_xref="CDD:225855"
     misc_feature    293514..293567
                     /gene="yccF"
                     /locus_tag="BSU02720"
                     /note="SEC-C motif; Region: SEC-C; pfam02810"
                     /db_xref="CDD:251544"
     misc_feature    294387..294536
                     /gene="yccF"
                     /locus_tag="BSU02720"
                     /note="helix-turn-helix, Psq domain; Region: HTH_psq;
                     pfam05225"
                     /db_xref="CDD:253102"
     gene            complement(294615..295571)
                     /gene="natK"
                     /locus_tag="BSU02730"
                     /db_xref="GeneID:938382"
     CDS             complement(294615..295571)
                     /gene="natK"
                     /locus_tag="BSU02730"
                     /function="16.12: Sense"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11717295, 17322186;
                     Product type rc: receptor"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="NP_388155.1"
                     /db_xref="GI:16077342"
                     /db_xref="GeneID:938382"
                     /translation="MITLFQCLYLILFSFICYQGAAAFSHSTAASWLAAALGAAAAGL
                     YIWNTKRVWKHCSSGLCAWIAVIQVMSVGVVLIGTDIMPVLCVIAIFAGCEGLRIGQS
                     ALQARLSDQIDKLTQAEQHANQMLIDVRSRNHDTMKHITAIKSAQPKADTQAYIQNWA
                     DQYSQYDRFLKGENAYVAGVLYDFLEKARASNVSVSLHMHTPLSSLPFSPADQVSLVG
                     NILENALDSAAEAREKAEIKLETSLRSGLYVLTCENSTPGMDPKVLDTIYQSFGRSTK
                     NGAHEGMGTYIIQKLVKGAFGRLDFTYRHPIFRLEIKIPFQK"
     misc_feature    complement(294618..>295571)
                     /gene="natK"
                     /locus_tag="BSU02730"
                     /note="Signal transduction histidine kinase regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; Region: CitA; COG3290"
                     /db_xref="CDD:225827"
     misc_feature    complement(294636..294929)
                     /gene="natK"
                     /locus_tag="BSU02730"
                     /note="Histidine kinase-like ATPases; This family includes
                     several ATP-binding proteins for example: histidine
                     kinase, DNA gyrase B, topoisomerases, heat shock protein
                     HSP90, phytochrome-like ATPases and DNA mismatch repair
                     proteins; Region: HATPase_c; cd00075"
                     /db_xref="CDD:238030"
     misc_feature    complement(order(294648..294650,294663..294665,
                     294669..294671,294717..294728,294795..294800,
                     294804..294806,294810..294812,294816..294818,
                     294894..294896,294903..294905,294915..294917))
                     /gene="natK"
                     /locus_tag="BSU02730"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:238030"
     misc_feature    complement(294903..294905)
                     /gene="natK"
                     /locus_tag="BSU02730"
                     /note="Mg2+ binding site [ion binding]; other site"
                     /db_xref="CDD:238030"
     misc_feature    complement(order(294720..294722,294726..294728,
                     294798..294800,294804..294806))
                     /gene="natK"
                     /locus_tag="BSU02730"
                     /note="G-X-G motif; other site"
                     /db_xref="CDD:238030"
     gene            complement(295584..296285)
                     /gene="natR"
                     /locus_tag="BSU02740"
                     /db_xref="GeneID:938379"
     CDS             complement(295584..296285)
                     /gene="natR"
                     /locus_tag="BSU02740"
                     /function="16.3: Control"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11717295, 17322186;
                     Product type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="NP_388156.1"
                     /db_xref="GI:16077343"
                     /db_xref="GeneID:938379"
                     /translation="MVKVGLVDDYRVDLEKLEAIVSRMQDVEIVFSTDSAKEAYRRVK
                     NGDIDLLLADIEMPHMSGYELADLIKSHSLDVDVIFVTGHGGYAVHAFDLNVHDYIMK
                     PYYADRLAASFDRYLKKKTETSLNGRILIKQKSEMHVLQKKDIIFAERTGRSTTIVTT
                     AEEVQTYQTLNDIKGDLPEKDFLRSHRSFIINIHYIKHFSAYTKHSFTVSFEGTSKKA
                     MITKQQLDYFQNYYF"
     misc_feature    complement(295590..296285)
                     /gene="natR"
                     /locus_tag="BSU02740"
                     /note="Response regulator of the LytR/AlgR family
                     [Transcription / Signal transduction mechanisms]; Region:
                     LytT; COG3279"
                     /db_xref="CDD:225818"
     misc_feature    complement(295935..296270)
                     /gene="natR"
                     /locus_tag="BSU02740"
                     /note="Signal receiver domain; originally thought to be
                     unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
                     recently identified in eukaroytes ETR1 Arabidopsis
                     thaliana; this domain receives the signal from the sensor
                     partner in a two-component systems; Region: REC; cd00156"
                     /db_xref="CDD:238088"
     misc_feature    complement(order(295977..295982,295989..295991,
                     296040..296042,296100..296102,296124..296126,
                     296259..296264))
                     /gene="natR"
                     /locus_tag="BSU02740"
                     /note="active site"
                     /db_xref="CDD:238088"
     misc_feature    complement(296124..296126)
                     /gene="natR"
                     /locus_tag="BSU02740"
                     /note="phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238088"
     misc_feature    complement(order(296100..296108,296112..296117))
                     /gene="natR"
                     /locus_tag="BSU02740"
                     /note="intermolecular recognition site; other site"
                     /db_xref="CDD:238088"
     misc_feature    complement(295974..295982)
                     /gene="natR"
                     /locus_tag="BSU02740"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238088"
     misc_feature    complement(295602..295883)
                     /gene="natR"
                     /locus_tag="BSU02740"
                     /note="LytTr DNA-binding domain; Region: LytTR; pfam04397"
                     /db_xref="CDD:252568"
     gene            296429..297169
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /db_xref="GeneID:938386"
     CDS             296429..297169
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10356997, 17322186;
                     Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding transport protein NatA"
                     /protein_id="NP_388157.1"
                     /db_xref="GI:16077344"
                     /db_xref="GeneID:938386"
                     /translation="MITLTDCSRRFQDKKKVVKAVRDVSLTIEKGEVVGILGENGAGK
                     TTMLRMIASLLEPSQGVITVDGFDTVKQPAEVKQRIGVLFGGETGLYDRMTAKENLQY
                     FGRLYGLNRHEIKARIEDLSKRFGMRDYMNRRVGGFSKGMRQKVAIARALIHDPDIIL
                     FDEPTTGLDITSSNIFREFIQQLKREQKTILFSSHIMEEVQALCDSVIMIHSGEVIYR
                     GALESLYESERSEDLNYIFMSKLVRGIS"
     misc_feature    296429..297160
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /note="ABC-type Na+ transport system, ATPase component
                     [Energy production and conversion / Inorganic ion
                     transport and metabolism]; Region: NatA; COG4555"
                     /db_xref="CDD:226927"
     misc_feature    296429..297085
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /note="ATP-binding cassette domain of the Na+ transporter;
                     Region: ABC_NatA_sodium_exporter; cd03266"
                     /db_xref="CDD:213233"
     misc_feature    296540..296563
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /note="Walker A/P-loop; other site"
                     /db_xref="CDD:213233"
     misc_feature    order(296549..296554,296558..296566,296681..296683,
                     296912..296917,297011..297013)
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:213233"
     misc_feature    296672..296683
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /note="Q-loop/lid; other site"
                     /db_xref="CDD:213233"
     misc_feature    296840..296869
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /note="ABC transporter signature motif; other site"
                     /db_xref="CDD:213233"
     misc_feature    296900..296917
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /note="Walker B; other site"
                     /db_xref="CDD:213233"
     misc_feature    296924..296935
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /note="D-loop; other site"
                     /db_xref="CDD:213233"
     misc_feature    296999..297019
                     /gene="natA"
                     /locus_tag="BSU02750"
                     /note="H-loop/switch region; other site"
                     /db_xref="CDD:213233"
     gene            297170..298330
                     /gene="natB"
                     /locus_tag="BSU02760"
                     /db_xref="GeneID:938383"
     CDS             297170..298330
                     /gene="natB"
                     /locus_tag="BSU02760"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10356997, 15849754,
                     16850406, 17322186; Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium efflux ABC transporter permease NatB"
                     /protein_id="NP_388158.1"
                     /db_xref="GI:16077345"
                     /db_xref="GeneID:938383"
                     /translation="MLSHIYKKEMIDALRDRKTILLTILVPMIMMLGLVFFYESMLSD
                     KGEQYTLAVGHSLPPALESKLNEIDEISVKTFAKPEEAVDEGKADAYLNVPKEFDSYV
                     NSMTPFKVDVYGNSIDQGSSNAMQLVQSALDQYKNEIVQQRLTNKHIDQSVIQPFTIQ
                     QKEADEEKGTSAIMLSAILPMLILTSIVSGAMPIALDIMAGEKDRKSIEALLLTPVSR
                     NKVLVGKWLAVSTFGVASGVFALVFLILSTVLFTENLKTAFQLGDHMWSVIGASALII
                     VLSALLISAMELFISIMSSSVKEAQSYMSLVVFLPVFPMFFIFSKAPNQFDLSYFLIP
                     FLNLHALFKQLLFGMVDPATILSTSGTIAVLIAIFFLLARACFLKDKWVLPK"
     misc_feature    297170..298312
                     /gene="natB"
                     /locus_tag="BSU02760"
                     /note="ABC-type Na+ efflux pump, permease component
                     [Energy production and conversion / Inorganic ion
                     transport and metabolism]; Region: NatB; COG1668"
                     /db_xref="CDD:224582"
     misc_feature    297629..298315
                     /gene="natB"
                     /locus_tag="BSU02760"
                     /note="ABC-2 family transporter protein; Region:
                     ABC2_membrane_2; pfam12679"
                     /db_xref="CDD:257216"
     gene            298466..299398
                     /gene="yccK"
                     /locus_tag="BSU02770"
                     /db_xref="GeneID:938384"
     CDS             298466..299398
                     /gene="yccK"
                     /locus_tag="BSU02770"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 17322186; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="NP_388159.1"
                     /db_xref="GI:16077346"
                     /db_xref="GeneID:938384"
                     /translation="MDQTRTLGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRT
                     ALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVDGSIELDNSR
                     EFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLD
                     YQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTGKFT
                     QDTVFDDFRKDKPQFQGETFIHNLKKVDKLKAVAEEKQADTAHVALAWLLTRPAIDAI
                     IPGAKRPEQLQDNLKTLNIELTEDEVNFISDIFK"
     misc_feature    298475..299389
                     /gene="yccK"
                     /locus_tag="BSU02770"
                     /note="Aldo-keto reductases (AKRs) are a superfamily of
                     soluble NAD(P)(H) oxidoreductases whose chief purpose is
                     to reduce aldehydes and ketones to primary and secondary
                     alcohols. AKRs are present in all phyla and are of
                     importance to both health and industrial...; Region:
                     Aldo_ket_red; cd06660"
                     /db_xref="CDD:119408"
     misc_feature    298478..299356
                     /gene="yccK"
                     /locus_tag="BSU02770"
                     /note="voltage-dependent potassium channel beta subunit,
                     animal; Region: Kv_beta; TIGR01293"
                     /db_xref="CDD:213602"
     misc_feature    order(298523..298531,298625..298627,298640..298642,
                     298721..298723,298844..298849,298934..298939,
                     298994..298996,299078..299095,299243..299245,
                     299294..299305,299318..299320,299327..299332)
                     /gene="yccK"
                     /locus_tag="BSU02770"
                     /note="active site"
                     /db_xref="CDD:119408"
     misc_feature    order(298625..298627,298640..298642,298721..298723,
                     298844..298846)
                     /gene="yccK"
                     /locus_tag="BSU02770"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:119408"
     gene            complement(299438..300502)
                     /gene="ycdA"
                     /locus_tag="BSU02780"
                     /db_xref="GeneID:938380"
     CDS             complement(299438..300502)
                     /gene="ycdA"
                     /locus_tag="BSU02780"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type lp: lipoprotein"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="NP_388160.1"
                     /db_xref="GI:16077347"
                     /db_xref="GeneID:938380"
                     /translation="MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQ
                     VKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQGDTKMSDT
                     DPEDYSEKLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGK
                     DKKILATADKLQDSAKALSAYVDVLLFGKDNADFEKITGANKNEIVNDFNESAKDGYL
                     SASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATVKPVDASSL
                     SDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQ
                     WQLDMDDYRAAELVEAFIKE"
     misc_feature    complement(300056..300409)
                     /gene="ycdA"
                     /locus_tag="BSU02780"
                     /note="Domain of unknown function (DUF4352); Region:
                     DUF4352; pfam11611"
                     /db_xref="CDD:256529"
     gene            300830..302248
                     /gene="ycdB"
                     /locus_tag="BSU02790"
                     /db_xref="GeneID:938381"
     CDS             300830..302248
                     /gene="ycdB"
                     /locus_tag="BSU02790"
                     /function="16.6: Maintain"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388161.1"
                     /db_xref="GI:16077348"
                     /db_xref="GeneID:938381"
                     /translation="MKGAAFVKKEGLKQKALEIGRVPTHLKLEIEDYGGDDKRAHFCW
                     ADPQDENTGIIVELGPDGELESLSRDIEPESGERLSEEKLEDIMRQFVETHHPGALSA
                     FVREENDRAYGDKVRFSYVQMEAGLPLPMSGFMADVSLSGEIVYFRYYGEAGSIIKPK
                     RVADVEEALAFIKKDVEFDLLFEVLHRSVYKNGDDQPHLVYEPEGRAITVPADLVQEE
                     QAVDDDDDYREPESFPLPLFEGIREKADPDSMIGIENGFVKEREADLGDGRIGIVWRN
                     PDDPVYQPADKSMDSWFKGRTHQVLKTIYNKETGKLEGVMSFMEKKGPLTVTLAECEK
                     IALRFLFALFPNADQYFRIRYDEKDEEENAVAGFTFEAHCHGVPLRFGQIRICVSRQT
                     GYITVYMGPDIDPNKLATIDPVPAISVEQAKSIFWQHFKVELGWEREYGDDEEHSYRL
                     VYKPVYPHFIDAHTGEPVFSIW"
     misc_feature    301793..>302227
                     /gene="ycdB"
                     /locus_tag="BSU02790"
                     /note="Zinc metalloprotease (elastase) [Amino acid
                     transport and metabolism]; Region: LasB; COG3227"
                     /db_xref="CDD:225768"
     gene            302435..303796
                     /gene="ycdC"
                     /locus_tag="BSU02800"
                     /db_xref="GeneID:938376"
     CDS             302435..303796
                     /gene="ycdC"
                     /locus_tag="BSU02800"
                     /function="16.6: Maintain"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388162.1"
                     /db_xref="GI:16077349"
                     /db_xref="GeneID:938376"
                     /translation="MVNKQLKKKAQEIGNVPTHYELEIEDYDQKQKKYGQAYFIWKDP
                     KDPEKHITVELRNDGALLTFSTTVHSETDKKLPDAELKLTALQFAAANHPGTFMNFHF
                     QGKEERGQHIRFVYTKMELGLPIPNSGFLIDMTRSGQIVHFLYYGEGHKAEVPTEFVA
                     KEKVVSHYLNTMSFELMYDVIDGEQEPRLVYEPILPGYSYPADVDEIVPDQHIADERI
                     ENTAPLPPLQNKEEVDIFALLGFTSDMQKVSERDFGEQIGSTWRRGAAPERKDLSIGS
                     YFETRNKNTIKMKTDKRTGKLKAALSFMDWRNNLQCSTEECQEIALQFLYALYPRAAE
                     FFRVNPVRIDERGRVRNHFSVWYKGVPLRFGAARIIVNPETGLIDAFMAPDIEPEQLE
                     AINHRPDVSAEEAKEAFLAAFDVKLEWQPDFTAGSDQHCKLVYKPVYPSYIDAHIRKK
                     KRL"
     gene            complement(303804..304307)
                     /gene="cwlK"
                     /locus_tag="BSU02810"
                     /db_xref="GeneID:938378"
     CDS             complement(303804..304307)
                     /gene="cwlK"
                     /locus_tag="BSU02810"
                     /EC_number="3.4.-.-"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 17588176; Product type e:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan L-alanyl-D-glutamate endopeptidase
                     CwlK"
                     /protein_id="NP_388163.1"
                     /db_xref="GI:16077350"
                     /db_xref="GeneID:938378"
                     /translation="MNLPAKTFVILCILFLLDLCFSYIRHEWHSQNALQDMPVPSDLH
                     PIVKQNADALKAAAANKGIDVVITEGFRSFKEQDELYKQGRTKKGNIVTYARGGESYH
                     NYGLAIDFALQKKDGSIIWDMEYDGNQNGKSDWLEVVEIAKTLGFEWGGDWKRFKDYP
                     HLEMIPN"
     misc_feature    complement(303861..304124)
                     /gene="cwlK"
                     /locus_tag="BSU02810"
                     /note="D-alanyl-D-alanine carboxypeptidase; Region: VanY;
                     pfam02557"
                     /db_xref="CDD:251373"
     gene            304430..305551
                     /gene="rapJ"
                     /locus_tag="BSU02820"
                     /db_xref="GeneID:938373"
     CDS             304430..305551
                     /gene="rapJ"
                     /locus_tag="BSU02820"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 16816200; Product type e:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator aspartate phosphatase J"
                     /protein_id="NP_388164.1"
                     /db_xref="GI:16077351"
                     /db_xref="GeneID:938373"
                     /translation="MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDME
                     ENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFSDMLNEIESNQQKLTGLLEYYFY
                     YFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
                     YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALEHARQLEEAYM
                     IAAAYYNVGHCKYSLGDYKEAEGYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYD
                     KAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTECFDLLESRQLLADAE
                     DLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ"
     misc_feature    304475..305323
                     /gene="rapJ"
                     /locus_tag="BSU02820"
                     /note="FOG: TPR repeat [General function prediction only];
                     Region: NrfG; COG0457"
                     /db_xref="CDD:223533"
     misc_feature    304733..305056
                     /gene="rapJ"
                     /locus_tag="BSU02820"
                     /note="Tetratricopeptide repeat domain; typically contains
                     34 amino acids
                     [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
                     X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
                     a variety of organisms including bacteria, cyanobacteria,
                     yeast, fungi; Region: TPR; cd00189"
                     /db_xref="CDD:238112"
     misc_feature    order(304736..304741,304748..304753,304856..304861,
                     304865..304870,304877..304882,304979..304984,
                     304991..304996,305003..305008)
                     /gene="rapJ"
                     /locus_tag="BSU02820"
                     /note="binding surface"
                     /db_xref="CDD:238112"
     misc_feature    order(304745..304747,304781..304783,304793..304795,
                     304802..304804,304865..304867,304901..304903,
                     304913..304915,304922..304924,304988..304990,
                     305024..305026,305036..305038,305045..305047)
                     /gene="rapJ"
                     /locus_tag="BSU02820"
                     /note="TPR motif; other site"
                     /db_xref="CDD:238112"
     misc_feature    305045..305290
                     /gene="rapJ"
                     /locus_tag="BSU02820"
                     /note="Tetratricopeptide repeat domain; typically contains
                     34 amino acids
                     [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
                     X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
                     a variety of organisms including bacteria, cyanobacteria,
                     yeast, fungi; Region: TPR; cd00189"
                     /db_xref="CDD:238112"
     misc_feature    order(305045..305047,305057..305059,305066..305068,
                     305108..305110,305144..305146,305156..305158,
                     305165..305167,305225..305227,305261..305263,
                     305273..305275,305282..305284)
                     /gene="rapJ"
                     /locus_tag="BSU02820"
                     /note="TPR motif; other site"
                     /db_xref="CDD:238112"
     misc_feature    order(305099..305104,305108..305113,305120..305125,
                     305216..305221,305228..305233,305240..305245)
                     /gene="rapJ"
                     /locus_tag="BSU02820"
                     /note="binding surface"
                     /db_xref="CDD:238112"
     gene            305658..306434
                     /gene="ycdF"
                     /locus_tag="BSU02830"
                     /db_xref="GeneID:938377"
     CDS             305658..306434
                     /gene="ycdF"
                     /locus_tag="BSU02830"
                     /EC_number="1.-.-.-"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 10220166, 11948145; Product type pe:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase 2"
                     /protein_id="NP_388165.1"
                     /db_xref="GI:16077352"
                     /db_xref="GeneID:938377"
                     /translation="MYKDLTGKTAIVTGSSKGIGKAIAERFGKEKMNVVVNYHSDPSG
                     ADETLEIIKQNGGKAVSVEADVSKEEGIQALLDTALEHFGTLDVMVNNSGFNGVEAMP
                     HEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQIPRPVNVQYS
                     TSKGGIKMMTETLALNYADKGIRVNAIAPGTIATESNVDTKKEESRQKQLKKIPMKAF
                     GKPEEVAAAAAWLVSEEASYVTGATLFVDGGMTLYPSQLE"
     misc_feature    305658..306422
                     /gene="ycdF"
                     /locus_tag="BSU02830"
                     /note="glucose-1-dehydrogenase; Provisional; Region:
                     PRK08936"
                     /db_xref="CDD:181585"
     misc_feature    305670..306425
                     /gene="ycdF"
                     /locus_tag="BSU02830"
                     /note="glucose 1 dehydrogenase (GlcDH), classical (c)
                     SDRs; Region: GlcDH_SDR_c; cd05358"
                     /db_xref="CDD:187616"
     misc_feature    order(305697..305699,305703..305714,305772..305774,
                     305847..305858,305931..305939,306003..306005,
                     306087..306095,306132..306134,306144..306146,
                     306222..306233,306237..306248)
                     /gene="ycdF"
                     /locus_tag="BSU02830"
                     /note="NAD binding site [chemical binding]; other site"
                     /db_xref="CDD:187616"
     misc_feature    order(305964..305966,305970..305972,305985..305987,
                     306012..306014,306033..306035,306102..306104,
                     306114..306116,306135..306140,306150..306152,
                     306159..306161,306171..306176,306183..306188)
                     /gene="ycdF"
                     /locus_tag="BSU02830"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:187616"
     misc_feature    order(306006..306008,306093..306095,306132..306134,
                     306144..306146)
                     /gene="ycdF"
                     /locus_tag="BSU02830"
                     /note="active site"
                     /db_xref="CDD:187616"
     gene            306459..308144
                     /gene="ycdG"
                     /locus_tag="BSU02840"
                     /db_xref="GeneID:938375"
     CDS             306459..308144
                     /gene="ycdG"
                     /locus_tag="BSU02840"
                     /EC_number="3.2.-.-"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 11544224; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="oligo-1,6-glucosidase 2"
                     /protein_id="NP_388166.1"
                     /db_xref="GI:16077353"
                     /db_xref="GeneID:938375"
                     /translation="MKTDWWKDAVVYQIYPRSFQDSNGDGIGDLRGIISRLDYIKELG
                     ADVIWICPIYPSPNVDYGYDVTNHKAIMDSYGTMDDFHELLDQVHQRGLKLVMDFVLN
                     HTSVEHPWFKEAELDKNSKYRSYYYWRPGTKNGPPTDWLSNYGCPVWQYEEHTGEYYL
                     HMNAVKQADLNWENPEVRQAVYDMMKFWLDKGVDGLRIDQLHLISKKEYLPSYEDYIN
                     QQAEPKPFQPNGERIHDYLKEITDEVFSHYDVMSVGEVGSVTPEEGLKYTGTDKHELN
                     MIFHFQHMELDQQPGKEHWDLKPLELSDLKSVLTKWQKKLEHQGWNTLFWCNHDQPRI
                     VSRFGDDGEYRKASAKMLAAVIYFMKGTPYIYQGEEIGMTNAPFTRIEDYKDIQTINM
                     YHKRVFEKGYDPNDVMRSILAKSRDHARTPMQWNSGKNAGFTDGTPWLKVNPNFTAIN
                     VEEAQGDPDSVLNYYKKLISLRKQYADLMKGSFDLLLPDDPQLFVYMRENSKQQLLSV
                     NNFSKEQAVFQWPKNCGKAQASLLLSNYNNDDLDDEMVFRPYESRVYLLDKTN"
     misc_feature    306471..308129
                     /gene="ycdG"
                     /locus_tag="BSU02840"
                     /note="alpha,alpha-phosphotrehalase; Region:
                     trehalose_treC; TIGR02403"
                     /db_xref="CDD:233851"
     misc_feature    306477..307880
                     /gene="ycdG"
                     /locus_tag="BSU02840"
                     /note="Alpha amylase catalytic domain found in Sucrose
                     isomerases, oligo-1,6-glucosidase (also called isomaltase;
                     sucrase-isomaltase; alpha-limit dextrinase), dextran
                     glucosidase (also called glucan 1,6-alpha-glucosidase),
                     and related proteins; Region: AmyAc_SI_OligoGlu_DGase;
                     cd11333"
                     /db_xref="CDD:200472"
     misc_feature    order(306519..306521,306525..306527,306531..306533,
                     306543..306545)
                     /gene="ycdG"
                     /locus_tag="BSU02840"
                     /note="Ca binding site [ion binding]; other site"
                     /db_xref="CDD:200472"
     misc_feature    order(306636..306638,306645..306647,306756..306758,
                     306765..306767,306888..306890,306945..306947,
                     306957..306959,307053..307055,307221..307223,
                     307704..307706)
                     /gene="ycdG"
                     /locus_tag="BSU02840"
                     /note="active site"
                     /db_xref="CDD:200472"
     misc_feature    order(307053..307055,307221..307223,307446..307448)
                     /gene="ycdG"
                     /locus_tag="BSU02840"
                     /note="catalytic site [active]"
                     /db_xref="CDD:200472"
     gene            308332..309291
                     /gene="adcA"
                     /locus_tag="BSU02850"
                     /db_xref="GeneID:938370"
     CDS             308332..309291
                     /gene="adcA"
                     /locus_tag="BSU02850"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 12426338, 14730579, 9379902; Product type lp :
                     lipoprotein"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transport system zinc-binding lipoprotein
                     AdcA"
                     /protein_id="NP_388167.1"
                     /db_xref="GI:16077354"
                     /db_xref="GeneID:938370"
                     /translation="MFKKWSGLFVIAACFLLVAACGNSSTKGSADSKGDKLHVVTTFY
                     PMYEFTKQIVKDKGDVDLLIPSSVEPHDWEPTPKDIANIQDADLFVYNSEYMETWVPS
                     AEKSMGQGHAVFVNASKGIDLMEGSEEEHEEHDHGEHEHSHAMDPHVWLSPVLAQKEV
                     KNITAQIVKQDPDNKEYYEKNSKEYIAKLQDLDKLYRTTAKKAEKKEFITQHTAFGYL
                     AKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASSKVADTLASEI
                     GAKTEVLNTLEGLSKEEQDKGLGYIDIMKQNLDALKDSLLVKS"
     misc_feature    308338..309279
                     /gene="adcA"
                     /locus_tag="BSU02850"
                     /note="ABC-type metal ion transport system, periplasmic
                     component/surface adhesin [Inorganic ion transport and
                     metabolism]; Region: LraI; COG0803"
                     /db_xref="CDD:223874"
     misc_feature    308431..309276
                     /gene="adcA"
                     /locus_tag="BSU02850"
                     /note="Metal binding protein AcdA.  These proteins have
                     been shown to function in the ABC uptake of Zn2+ and Mn2+
                     and in competence for genetic transformation and adhesion.
                     The AcdA proteins belong to the TroA superfamily of
                     helical backbone metal receptor...; Region: AdcA; cd01017"
                     /db_xref="CDD:238499"
     misc_feature    order(308542..308544,308773..308775,308965..308967,
                     309190..309192)
                     /gene="adcA"
                     /locus_tag="BSU02850"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:238499"
     gene            309347..310042
                     /gene="adcC"
                     /locus_tag="BSU02860"
                     /db_xref="GeneID:938374"
     CDS             309347..310042
                     /gene="adcC"
                     /locus_tag="BSU02860"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 9379902, 9811636; Product type t : transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transport system ATP-binding protein AdcC"
                     /protein_id="NP_388168.1"
                     /db_xref="GI:16077355"
                     /db_xref="GeneID:938374"
                     /translation="MNLVSLKDIVFGYSHTPVLDKVSLDIESGEFVGITGPNGASKST
                     LIKVMLGMLKPWEGTVTISKRNTEGKRLTIGYVPQQISSFNAGFPSTVLELVQSGRYT
                     KGKWFKRLNEEDHLEVEKALKMVEMWDLRHRKIGDLSGGQKQKICIARMLASNPDLLM
                     LDEPTTAVDYDSRKGFYEFMHHLVKNHNRTVVMVTHEQNEVQQFLDKVIRLERGEKGG
                     WKCLTWNSCDELF"
     misc_feature    309347..310039
                     /gene="adcC"
                     /locus_tag="BSU02860"
                     /note="ABC-type Mn/Zn transport systems, ATPase component
                     [Inorganic ion transport and metabolism]; Region: ZnuC;
                     COG1121"
                     /db_xref="CDD:224046"
     misc_feature    309359..309988
                     /gene="adcC"
                     /locus_tag="BSU02860"
                     /note="ATP-binding cassette domain of the metal-type
                     transporters; Region: ABC_Metallic_Cations; cd03235"
                     /db_xref="CDD:213202"
     gene            310000..310842
                     /gene="adcB"
                     /locus_tag="BSU02870"
                     /db_xref="GeneID:938367"
     CDS             310000..310842
                     /gene="adcB"
                     /locus_tag="BSU02870"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 15849754, 16850406, 9379902, 9811636; Product
                     type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transport system permease protein AdcB"
                     /protein_id="NP_388169.1"
                     /db_xref="GI:16077356"
                     /db_xref="GeneID:938367"
                     /translation="MEMFDLEFMRRAFLAGGMIAVMAPILGVYLVLRRQALMADTLSH
                     ISLSGVAIGFFLSTNITAASIVVVTIGAIGIEYMRRAYRTYSEVSIAILMAAGLSFAM
                     FLISLSKGTANMSIDQYLFGSLVTVNQQQVYIISIITLLILLYFIVLRRPLYLLTFDE
                     ATAKTSGINTNVLSLSFSIVTGLAISVIIPIIGVLLVSALLVLPAAFAIRIAKGFNMV
                     FITAILISLFSVFTGLTSSYQLGTPPGPSITLLLIVLLLIGFAVQGVWTFIKKEAQRK
                     KRSR"
     misc_feature    310024..310740
                     /gene="adcB"
                     /locus_tag="BSU02870"
                     /note="Transmembrane subunit (TM), of Periplasmic Binding
                     Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters involved in the uptake of siderophores, heme,
                     vitamin B12, or the divalent cations Mg2+ and Zn2+.
                     PBP-dependent ABC transporters consist of...; Region:
                     TM_ABC_iron-siderophores_like; cd06550"
                     /db_xref="CDD:119348"
     misc_feature    order(310078..310080,310090..310098,310438..310443,
                     310447..310455,310459..310464,310468..310485,
                     310489..310497,310621..310623,310642..310644)
                     /gene="adcB"
                     /locus_tag="BSU02870"
                     /note="ABC-ATPase subunit  interface; other site"
                     /db_xref="CDD:119348"
     misc_feature    order(310093..310095,310099..310101,310114..310116,
                     310255..310257,310261..310266,310273..310278,
                     310285..310290,310297..310299,310306..310311,
                     310315..310317,310348..310353,310360..310362,
                     310591..310593,310735..310737)
                     /gene="adcB"
                     /locus_tag="BSU02870"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:119348"
     misc_feature    order(310315..310317,310390..310392,310564..310566,
                     310576..310578,310711..310713,310726..310728)
                     /gene="adcB"
                     /locus_tag="BSU02870"
                     /note="putative PBP binding regions; other site"
                     /db_xref="CDD:119348"
     gene            complement(310880..311875)
                     /gene="yceB"
                     /locus_tag="BSU02880"
                     /db_xref="GeneID:938371"
     CDS             complement(310880..311875)
                     /gene="yceB"
                     /locus_tag="BSU02880"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 16428414; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388170.2"
                     /db_xref="GI:255767077"
                     /db_xref="GeneID:938371"
                     /translation="MIHLSILDQAPVSKGESPVTTLQHSVELAQLSEQWGYKRYWFAE
                     HHSTKGLASTAPEIMIARIAAQTNTIRVGSGGVLLPQYSPFKVAETFRQLEALYPNRI
                     DLGVGRSPGGTTKTRLALTDGVKKSLTEFNRQLQDVSYFLTDSLPPDHPYAGIKAAPL
                     IGTAPELWVLGLGENSARRAAHQGIGYVFGHFINPERGENAFRIYRESFRPSAHFSNP
                     SALFTIFVICAKTDEEAEELALSQDLWLLRVGKGLDSRVPSIEEAKAHPYTASDKKLI
                     EENRKRMVIGSPTTVKQQLLDLTGCYETNEIMVLCNVFDFEAKKESYERLAELFL"
     misc_feature    complement(<311537..311860)
                     /gene="yceB"
                     /locus_tag="BSU02880"
                     /note="Flavin-utilizing monoxygenases; Region:
                     Flavin_utilizing_monoxygenases; cl19096"
                     /db_xref="CDD:267449"
     misc_feature    complement(311234..>311377)
                     /gene="yceB"
                     /locus_tag="BSU02880"
                     /note="Flavin-utilizing monoxygenases; Region:
                     Flavin_utilizing_monoxygenases; cd00347"
                     /db_xref="CDD:238209"
     gene            312159..312758
                     /gene="yceC"
                     /locus_tag="BSU02890"
                     /db_xref="GeneID:938372"
     CDS             312159..312758
                     /gene="yceC"
                     /locus_tag="BSU02890"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf:  factor"
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein SCP2"
                     /protein_id="NP_388171.1"
                     /db_xref="GI:16077358"
                     /db_xref="GeneID:938372"
                     /translation="MAISLEKGQRIDLTKGKAGLSKLMVGLGWDPVSSGGGFFSKLLG
                     GGGPNIDCDASVLMLENGKFTDKKNLIYFGNLKSRCGGVQHTGDNLTGDGAGDDEQIM
                     IDLDKVPGNIDKLVFVVNIYDCVRRKQDFGMIQNAFIRVVDQSNHEEMLKYNLRDNYA
                     GRTSLITAEIYRSGSEWKFAAVGEGTNDTRLEDIISRYV"
     misc_feature    312216..312752
                     /gene="yceC"
                     /locus_tag="BSU02890"
                     /note="Uncharacterized proteins involved in stress
                     response, similar to tellurium resistance terD; Region:
                     TerD_like; cd06974"
                     /db_xref="CDD:132992"
     misc_feature    order(312309..312311,312315..312317,312453..312455)
                     /gene="yceC"
                     /locus_tag="BSU02890"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:132992"
     gene            312780..313361
                     /gene="yceD"
                     /locus_tag="BSU02900"
                     /db_xref="GeneID:938364"
     CDS             312780..313361
                     /gene="yceD"
                     /locus_tag="BSU02900"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf:  factor"
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein 16U"
                     /protein_id="NP_388172.1"
                     /db_xref="GI:16077359"
                     /db_xref="GeneID:938364"
                     /translation="MTISLAKGQKVDLTKTNPGLSKVVVGLGWDTNKYDGGHDFDLDS
                     SVFLLDAAGKCASPNDFIFYNQLEGGNGSVVHSGDNLTGAGEGDDENVKVNLSAVPAN
                     IDKISFVITIHDAEARSQNFGQVSNAFVRIVNEETNEELIRYDLAEDFSIETAIIAGE
                     LYRHNGEWKFSAIGSGYQGGLARIATDYGLQVG"
     misc_feature    312837..313346
                     /gene="yceD"
                     /locus_tag="BSU02900"
                     /note="Uncharacterized proteins involved in stress
                     response, similar to tellurium resistance terD; Region:
                     TerD_like; cd06974"
                     /db_xref="CDD:132992"
     misc_feature    order(312900..312902,312906..312908,313047..313049)
                     /gene="yceD"
                     /locus_tag="BSU02900"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:132992"
     gene            313396..313974
                     /gene="yceE"
                     /locus_tag="BSU02910"
                     /db_xref="GeneID:938368"
     CDS             313396..313974
                     /gene="yceE"
                     /locus_tag="BSU02910"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf:  factor"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388173.1"
                     /db_xref="GI:16077360"
                     /db_xref="GeneID:938368"
                     /translation="MAIQLSKGQRIDLTKTNPGLTKAVIGLGWDTNKYSGGHDFDLDA
                     SAFLVDAHDNCVNDLDFVFYNNLEHPSGGVIHTGDNRTGEGDGDDEQIIVDFSKIPAH
                     IEKIGITVTIHDAEARSQNFGQVSNAFVRVVDEETQNELLRFDLGEDFSIETAVVVCE
                     LYRHGGEWKFNAIGSGFSGGLAALCRNYGLQV"
     misc_feature    313453..313962
                     /gene="yceE"
                     /locus_tag="BSU02910"
                     /note="Uncharacterized proteins involved in stress
                     response, similar to tellurium resistance terD; Region:
                     TerD_like; cd06974"
                     /db_xref="CDD:132992"
     misc_feature    order(313516..313518,313522..313524,313663..313665)
                     /gene="yceE"
                     /locus_tag="BSU02910"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:132992"
     gene            314025..314798
                     /gene="yceF"
                     /locus_tag="BSU02920"
                     /db_xref="GeneID:938369"
     CDS             314025..314798
                     /gene="yceF"
                     /locus_tag="BSU02920"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein"
                     /protein_id="NP_388174.1"
                     /db_xref="GI:16077361"
                     /db_xref="GeneID:938369"
                     /translation="MDFLHHILSTYASFFDWKMWGEVLTDPVSWGLIGSLVVLEGLLS
                     ADNALVLAVMVKHLPEKQRKKALTYGLFGAYIFRFIFIGLGMLLIKFWWIKVLGALYL
                     AWLVIKHFWIGEKEEEADGMKKNSWMVRTFGIFWATVISVELMDLAFSVDSILAAFAV
                     SEKVWVLLIGGMLGILMMRTVAKVFLVLIDKIPELENTAFVLIGIIALKMAGSAFHYE
                     MPHSVFFIIIIAAFAVTLIIHYINKQKQVREQTAASKEE"
     misc_feature    314133..314750
                     /gene="yceF"
                     /locus_tag="BSU02920"
                     /note="integral membrane protein, YkoY family; Region:
                     R_switched_YkoY; TIGR03716"
                     /db_xref="CDD:234326"
     gene            314883..316496
                     /gene="yceG"
                     /locus_tag="BSU02930"
                     /db_xref="GeneID:938361"
     CDS             314883..316496
                     /gene="yceG"
                     /locus_tag="BSU02930"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388175.1"
                     /db_xref="GI:16077362"
                     /db_xref="GeneID:938361"
                     /translation="MRQEELTIHKALPADGDWKSLLFQPLPERDHYETAQGLSFSRLA
                     GQILGTPIDETDYYNELYELSVNDRITILSETLDKTIEPETFQKLQHIHSINQKEKGL
                     SVSRFVAFLDGEKLIAKHSNPLMHRHLRKALMTLLHTFADSHEKGLNHPDFRRVLLDV
                     SKFSLNHLNPWLEKTDIEREMPKVVWYGDATKSQLYFLYYLMLVGCDVLLFHPAGTDQ
                     LALVDPKQELGFTEKLPDVSELQPFPKEKPDRKSTVAYRSTKEIEHVLNHEESMLYKP
                     WQFRDHTPVSVTLKTTYDELFLITKERAFIRPNFKADKHSIEIPNVFAKIMGVSKDNK
                     EYWNRLHTLADYQETEMVRSFPFTEEIKSNYQFHYSHALDQEGNIDPDKLMASNVWQY
                     KQLPAGVQTAIAKTISRMCRYPRLKALHQEQVKDVQIYLFKQTTNLPANLLKLIQMFD
                     YAQTVPKLVLYHTEMSGGLTRSDAAALLFLNEIGIDIIIYNPPGHQDIEQFIEEDQYD
                     IHWLDDMVFQQDYKEPSLVKRLFRTITQK"
     misc_feature    314985..316475
                     /gene="yceG"
                     /locus_tag="BSU02930"
                     /note="Domain of unknown function (DUF4356); Region:
                     DUF4356; pfam14266"
                     /db_xref="CDD:258451"
     gene            316512..317603
                     /gene="yceH"
                     /locus_tag="BSU02940"
                     /db_xref="GeneID:938366"
     CDS             316512..317603
                     /gene="yceH"
                     /locus_tag="BSU02940"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388176.1"
                     /db_xref="GI:16077363"
                     /db_xref="GeneID:938366"
                     /translation="MTTENQNPLVLDKNEEISQQKADDIRLQLRQEPEVKRLAQQIDV
                     KNQMELLEYGKEPAVEISKFSDRILGMMKTTSVTDSGTMLTQLGKIMDRFDKNDFDEP
                     KGLMAKIFKRGGSMIEKIFKKYQTLGGEIEKIHVEISKYKDEMTKTNYTLDEMYENNI
                     KYYMELEKYVVAGQMKLEEMQSILPSYEEKAASGNQLAQMQLDTLRNGIQALEERVYD
                     LDMARMVALQTAPQIRLLQRGNAKLIGKINSAFIITIPIFKNGIIQAVTVKRQKLVAD
                     SMSELDRRTNEMLKRNAENISSQSVEIARMAGRPSIDIETIESSWNTIVSGMQETKQI
                     EEENKRLREDGARRIAQLQDNIKKAALQQ"
     misc_feature    316536..317600
                     /gene="yceH"
                     /locus_tag="BSU02940"
                     /note="Uncharacterized protein involved in tellurite
                     resistance [Inorganic ion transport and metabolism];
                     Region: TelA; COG3853"
                     /db_xref="CDD:226371"
     misc_feature    316611..317597
                     /gene="yceH"
                     /locus_tag="BSU02940"
                     /note="Toxic anion resistance protein (TelA); Region:
                     TelA; pfam05816"
                     /db_xref="CDD:253402"
     gene            317725..318927
                     /gene="yceI"
                     /locus_tag="BSU02950"
                     /db_xref="GeneID:938365"
     CDS             317725..318927
                     /gene="yceI"
                     /locus_tag="BSU02950"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="niacin/nicotinamide transporter NaiP"
                     /protein_id="NP_388177.1"
                     /db_xref="GI:16077364"
                     /db_xref="GeneID:938365"
                     /translation="MGKQQPISQRKLLGVAGLGWLFDAMDVGILSFIIAALHVEWNLS
                     PEEMKWIGSVNSIGMAAGAFLFGLLADRIGRKKVFIITLLCFSIGSGISAFVTSLSAF
                     LILRFVIGMGLGGELPVASTLVSEAVVPEKRGRVIVLLESFWAVGWLAAALISYFVIP
                     SFGWQAALLLTALTAFYALYLRTSLPDSPKYESLSAKKRSMWENVKSVWARQYIRPTV
                     MLSIVWFCVVFSYYGMFLWLPSVMLLKGFSMIQSFEYVLLMTLAQLPGYFSAAWLIEK
                     AGRKWILVVYLIGTAGSAYFFGTADSLSLLLTAGVLLSFFNLGAWGVLYAYTPEQYPT
                     AIRATGSGTTAAFGRIGGIFGPLLVGTLAARHISFSVIFSIFCIAILLAVACILIMGK
                     ETKQTELE"
     misc_feature    317749..318813
                     /gene="yceI"
                     /locus_tag="BSU02950"
                     /note="benzoate transport; Region: 2A0115; TIGR00895"
                     /db_xref="CDD:233175"
     misc_feature    317761..318894
                     /gene="yceI"
                     /locus_tag="BSU02950"
                     /note="The Major Facilitator Superfamily (MFS) is a large
                     and diverse group of secondary transporters that includes
                     uniporters, symporters, and antiporters. MFS proteins
                     facilitate the transport across cytoplasmic or internal
                     membranes of a variety of...; Region: MFS; cd06174"
                     /db_xref="CDD:119392"
     misc_feature    order(317803..317805,317812..317820,317824..317829,
                     317878..317880,317887..317892,317899..317901,
                     317911..317916,317920..317925,318061..318066,
                     318073..318078,318085..318090,318097..318099,
                     318133..318138,318145..318150,318166..318168,
                     318406..318408,318415..318420,318427..318432,
                     318439..318441,318478..318480,318490..318492,
                     318502..318504,318511..318513,318523..318525,
                     318664..318666,318673..318678,318685..318687,
                     318697..318702,318709..318711,318742..318747,
                     318754..318759,318766..318771,318778..318780)
                     /gene="yceI"
                     /locus_tag="BSU02950"
                     /note="putative substrate translocation pore; other site"
                     /db_xref="CDD:119392"
     gene            complement(319180..320352)
                     /gene="yceJ"
                     /locus_tag="BSU02960"
                     /db_xref="GeneID:938363"
     CDS             complement(319180..320352)
                     /gene="yceJ"
                     /locus_tag="BSU02960"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="NP_388178.1"
                     /db_xref="GI:16077365"
                     /db_xref="GeneID:938363"
                     /translation="MNRIWLFFSVMFVIGTDTFLLSPLLPLLQDQFHVSTDLSGWMVS
                     AYALGYALFAFIAGPISDRLNRKTVMLWGLAGFIVSTFLCGIAPSFAAMCLFRFAAGV
                     SAAFVTPQIWASIPVIVQPSQIIKGMGIATAGLAASQMLGLPIGGFLASFTWHTPFFV
                     LSACSLILLLILAAVMPGIRPSEPLARPSIVNPYRELFSLPKTSVILLAYFLFQTGNF
                     ASFSFLGTWLSADYHLTVSQIGAAMLVLGLGNMLGSLIGSRVSEKLGMFKTLISGMLL
                     MGALYFALPFFPNLFLVEAGFFLTFFTAGIIFPLMMGVFQSIAPNARGTIASLSNAAM
                     YAGTTVGTSIAGFLYQSTQHFGAVTGFTAILFILSMTLYQTISKTGKRQSTARAQL"
     misc_feature    complement(319198..320346)
                     /gene="yceJ"
                     /locus_tag="BSU02960"
                     /note="Arabinose efflux permease [Carbohydrate transport
                     and metabolism]; Region: AraJ; COG2814"
                     /db_xref="CDD:225371"
     misc_feature    complement(319252..320343)
                     /gene="yceJ"
                     /locus_tag="BSU02960"
                     /note="The Major Facilitator Superfamily (MFS) is a large
                     and diverse group of secondary transporters that includes
                     uniporters, symporters, and antiporters. MFS proteins
                     facilitate the transport across cytoplasmic or internal
                     membranes of a variety of...; Region: MFS; cd06174"
                     /db_xref="CDD:119392"
     misc_feature    complement(order(319339..319341,319348..319353,
                     319360..319365,319372..319377,319405..319407,
                     319414..319419,319429..319431,319438..319443,
                     319450..319452,319591..319593,319603..319605,
                     319612..319614,319624..319626,319636..319638,
                     319678..319680,319687..319692,319699..319704,
                     319711..319713,319936..319938,319954..319959,
                     319966..319971,320005..320007,320014..320019,
                     320026..320031,320038..320043,320179..320184,
                     320188..320193,320203..320205,320212..320217,
                     320224..320226,320275..320280,320284..320292,
                     320299..320301))
                     /gene="yceJ"
                     /locus_tag="BSU02960"
                     /note="putative substrate translocation pore; other site"
                     /db_xref="CDD:119392"
     gene            complement(320421..320723)
                     /gene="yceK"
                     /locus_tag="BSU02970"
                     /db_xref="GeneID:938357"
     CDS             complement(320421..320723)
                     /gene="yceK"
                     /locus_tag="BSU02970"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pr:  regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="NP_388179.1"
                     /db_xref="GI:16077366"
                     /db_xref="GeneID:938357"
                     /translation="MYYSFMTMKQSDDQIRAQIFKALSDESRLAIIRTLYVSGKELSC
                     GEVGEKCNIVKTTASYHFKTLREAGLTATRKDSRTKYVSLREDTFQTYLPGFLETL"
     misc_feature    complement(320463..320666)
                     /gene="yceK"
                     /locus_tag="BSU02970"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; Region: HTH_ARSR;
                     cd00090"
                     /db_xref="CDD:238042"
     misc_feature    complement(order(320517..320519,320613..320615,
                     320622..320627,320634..320639,320646..320648,
                     320655..320657,320661..320666))
                     /gene="yceK"
                     /locus_tag="BSU02970"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238042"
     misc_feature    complement(order(320478..320486,320499..320507,
                     320523..320528,320532..320537,320544..320549,
                     320553..320564,320589..320597,320640..320648,
                     320658..320663))
                     /gene="yceK"
                     /locus_tag="BSU02970"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238042"
     misc_feature    complement(order(320586..320588,320595..320597))
                     /gene="yceK"
                     /locus_tag="BSU02970"
                     /note="putative Zn2+ binding site [ion binding]; other
                     site"
                     /db_xref="CDD:238042"
     gene            321013..322269
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /db_xref="GeneID:938362"
     CDS             321013..322269
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 16225868, 16645306,
                     7622480; Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/betaine ABC transporter ATP-binding
                     protein"
                     /protein_id="NP_388180.2"
                     /db_xref="GI:255767078"
                     /db_xref="GeneID:938362"
                     /translation="MSVDEKPIKIKVEKVSKIFGKQTKKAVQMLANGKTKKEILKATG
                     STVGVNQADFEVYDGEIFVIMGLSGSGKSTLVRMLNRLIEPTAGNIYIDGDMITNMSK
                     DQLREVRRKKISMVFQKFALFPHRTILENTEYGLELQGVDKQERQQKALESLKLVGLE
                     GFEHQYPDQLSGGMQQRVGLARALTNDPDILLMDEAFSALDPLIRKDMQDELLDLHDN
                     VGKTIIFITHDLDEALRIGDRIVLMKDGNIVQIGTPEEILMNPSNEYVEKFVEDVDLS
                     KVLTAGHIMKRAETVRIDKGPRVALTLMKNLGISSIYAVDKQKKLLGVIYASDAKKAA
                     ESDLSLQDILNTEFTTVPENTYLTEIFDVVSDANIPIAVVDEKQRMKGIVVRGALIGA
                     LAGNNEYINAEGTNEQTQDPSAQEVK"
     misc_feature    321028..322203
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /note="ABC-type proline/glycine betaine transport system,
                     ATPase component [Amino acid transport and metabolism];
                     Region: ProV; COG4175"
                     /db_xref="CDD:226643"
     misc_feature    321040..321846
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /note="ATP-binding cassette domain of the osmoprotectant
                     proline/glycine betaine uptake system; Region:
                     ABC_Pro_Gly_Betaine; cd03294"
                     /db_xref="CDD:213261"
     misc_feature    321208..321231
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /note="Walker A/P-loop; other site"
                     /db_xref="CDD:213261"
     misc_feature    order(321217..321222,321226..321234,321364..321366,
                     321592..321597,321694..321696)
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:213261"
     misc_feature    321355..321366
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /note="Q-loop/lid; other site"
                     /db_xref="CDD:213261"
     misc_feature    321520..321549
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /note="ABC transporter signature motif; other site"
                     /db_xref="CDD:213261"
     misc_feature    321580..321597
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /note="Walker B; other site"
                     /db_xref="CDD:213261"
     misc_feature    321604..321615
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /note="D-loop; other site"
                     /db_xref="CDD:213261"
     misc_feature    321682..321702
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /note="H-loop/switch region; other site"
                     /db_xref="CDD:213261"
     misc_feature    321880..322188
                     /gene="opuAA"
                     /locus_tag="BSU02980"
                     /note="The CBS domain, named after human CBS, is a small
                     domain originally identified in cystathionine
                     beta-synthase and is subsequently found in a wide range of
                     different proteins. CBS domains usually occur in tandem
                     repeats. They associate to form a so-called...; Region:
                     CBS_pair; cl15354"
                     /db_xref="CDD:265675"
     gene            322271..323119
                     /gene="opuAB"
                     /locus_tag="BSU02990"
                     /db_xref="GeneID:938360"
     CDS             322271..323119
                     /gene="opuAB"
                     /locus_tag="BSU02990"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15849754, 16225868,
                     16645306, 16850406, 8752321; Product type t : transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine transport system permease
                     protein OpuAB"
                     /protein_id="NP_388181.1"
                     /db_xref="GI:16077368"
                     /db_xref="GeneID:938360"
                     /translation="MDRLPRIPLADIIDRFVDWITMTFGGFFDGIANGLAAFVNGIVT
                     GLGFIPSILLTIIFAALAWWISTRGIALFTLIGFLLIDYLGYWDPMLQTLALVLTSVI
                     ISIVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFFNIGVVPGVVASV
                     IFAMPPTIRMTVLGIKQVPADLIEATEAFGSTTAQRLFKVQLPLATKTILAGINQSIM
                     LALSMVVIAAMVGAPGLGSEVYSAVTQLKTGVGVEAGIAIVIVAITLDRITQNIKVKK
                     KSRGNA"
     misc_feature    322538..323065
                     /gene="opuAB"
                     /locus_tag="BSU02990"
                     /note="Transmembrane subunit (TM) found in Periplasmic
                     Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which generally bind type 2 PBPs. These types
                     of transporters consist of a PBP, two TMs, and two
                     cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
                     cd06261"
                     /db_xref="CDD:119394"
     misc_feature    order(322586..322591,322598..322603,322616..322618,
                     322643..322654,322658..322687,322694..322699,
                     322703..322705,322751..322756,322760..322762,
                     322766..322768,322775..322780,322784..322786,
                     322796..322801,322808..322810,322859..322861,
                     322901..322906,322913..322915,322934..322945,
                     322952..322957,322994..322999,323027..323032,
                     323039..323044,323048..323053,323060..323065)
                     /gene="opuAB"
                     /locus_tag="BSU02990"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:119394"
     misc_feature    order(322661..322705,322934..322951)
                     /gene="opuAB"
                     /locus_tag="BSU02990"
                     /note="conserved gate region; other site"
                     /db_xref="CDD:119394"
     misc_feature    order(322703..322705,322736..322738,322952..322954,
                     322988..322990,322997..322999,323027..323029)
                     /gene="opuAB"
                     /locus_tag="BSU02990"
                     /note="putative PBP binding loops; other site"
                     /db_xref="CDD:119394"
     misc_feature    order(322811..322849,322865..322870,322880..322882)
                     /gene="opuAB"
                     /locus_tag="BSU02990"
                     /note="ABC-ATPase subunit interface; other site"
                     /db_xref="CDD:119394"
     gene            323119..324000
                     /gene="opuAC"
                     /locus_tag="BSU03000"
                     /db_xref="GeneID:938354"
     CDS             323119..324000
                     /gene="opuAC"
                     /locus_tag="BSU03000"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 16225868, 16645306,
                     7622480; Product type lp: lipoprotein"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine-binding protein OpuAC"
                     /protein_id="NP_388182.1"
                     /db_xref="GI:16077369"
                     /db_xref="GeneID:938354"
                     /translation="MLKKIIGIGVSAMLALSLAACGSENDENASAAEQVNKTIIGIDP
                     GSGIMSLTDKAMKDYDLNDWTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRY
                     KLKYLDDPKQSYGSAEEIHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKVEEGE
                     KPAKVAAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGY
                     EVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGL
                     VVPQYMKNVNSIEDLKK"
     misc_feature    323119..323994
                     /gene="opuAC"
                     /locus_tag="BSU03000"
                     /note="ABC-type proline/glycine betaine transport systems,
                     periplasmic components [Amino acid transport and
                     metabolism]; Region: ProX; COG2113"
                     /db_xref="CDD:225024"
     gene            complement(324038..325189)
                     /gene="amhX"
                     /locus_tag="BSU03010"
                     /db_xref="GeneID:938351"
     CDS             complement(324038..325189)
                     /gene="amhX"
                     /locus_tag="BSU03010"
                     /EC_number="3.5.1.-"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 8768514; Product type e :
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase AmhX"
                     /protein_id="NP_388183.2"
                     /db_xref="GI:255767079"
                     /db_xref="GeneID:938351"
                     /translation="MQKLSEEMKQTIMDIFEHLHANPEVSWKEYETTSFLKQKLEDLG
                     CRTRTFSDCTGVVGEIGSGSPVVAVRADIDALWQEVNGTFRANHSCGHDSHMTMALGT
                     LMLLKKQPELPKGTIRFIFQPAEEKGGGALKMIEEGVLDDIDYLYGVHVRPIQETQNG
                     RCAPSILHGSSQHIEGTIIGEEAHGARPHLGKNSIEIAAFLVHKLGLIHIDPQIPHTV
                     KMTKLQAGGESSNIIPGKASFSLDLRAQTNEAMEALIAETERACEAAAAAFGAKIELH
                     KEHSLPAATQNKEAEAIMAEAITEIIGAERLDDPLVTTGGEDFHFYAVKVPNLKTTML
                     GLGCGLQPGLHHPHMTFDRNAMFTGIHILANAVLKTFQKAESLAAANAS"
     misc_feature    complement(324083..325171)
                     /gene="amhX"
                     /locus_tag="BSU03010"
                     /note="M20 Peptidase Aminoacylase 1 amhX_like subfamily;
                     Region: M20_Acy1_amhX_like; cd08018"
                     /db_xref="CDD:193565"
     misc_feature    complement(324113..325156)
                     /gene="amhX"
                     /locus_tag="BSU03010"
                     /note="amidohydrolase; Region: amidohydrolases; TIGR01891"
                     /db_xref="CDD:233621"
     misc_feature    complement(order(324155..324157,324740..324742,
                     324812..324814,324914..324916,324920..324922))
                     /gene="amhX"
                     /locus_tag="BSU03010"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:193565"
     misc_feature    complement(order(324464..324472,324488..324490,
                     324494..324499,324512..324532,324572..324574,
                     324581..324583,324590..324592,324602..324607,
                     324671..324673))
                     /gene="amhX"
                     /locus_tag="BSU03010"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:193565"
     gene            325339..326772
                     /gene="ycgA"
                     /locus_tag="BSU03020"
                     /db_xref="GeneID:938359"
     CDS             325339..326772
                     /gene="ycgA"
                     /locus_tag="BSU03020"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pm:
                     membrane component"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388184.2"
                     /db_xref="GI:255767080"
                     /db_xref="GeneID:938359"
                     /translation="MSMPAAETQPKKKRMTFKMPDAYVLLFMIAFICAIASYIVPAGE
                     FDRVTKGDVTTAVPGSYHSIEQSPVRLISFFTSLQDGMVGSAPIIFLILFTGGTIAIL
                     EKTGAINGLIYNVISKFRTKQLLFICIVGALFSILGTTGIVVNSVIGFIPIGLIVARS
                     LKWDAVAGAAVIYIGCYAGFNSTILSPSPLGLSQSIAELPLFSGIGLRVVIYICFLLS
                     SIIYIYLYTRKLKKSKDASVLGTDWFPAAGMGEAGKEEDQSVPFTVRHKLILAVAGLS
                     LVGFLYGALKLGWSDSQMAATFIFISVLAGLIGGLAANDIAKTFITGCQSLVYGALIV
                     GMARSISVILENGKLLDTVVNALASLLDGFSPIAGAIGMYIASALLHFLISSGSGEAV
                     VFIPILAPLADLMGITRQVAVEAVMLGEGVVNCVNPTSGVLMAVLAASGIPYVKWLRF
                     MVPLALIWFLIGLVFIVIGVMINWGPF"
     misc_feature    325366..326754
                     /gene="ycgA"
                     /locus_tag="BSU03020"
                     /note="Predicted membrane protein [Function unknown];
                     Region: COG1288"
                     /db_xref="CDD:224207"
     gene            326888..327469
                     /gene="ycgB"
                     /locus_tag="BSU03030"
                     /db_xref="GeneID:938355"
     CDS             326888..327469
                     /gene="ycgB"
                     /locus_tag="BSU03030"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pm:
                     membrane component"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388185.2"
                     /db_xref="GI:255767081"
                     /db_xref="GeneID:938355"
                     /translation="MNNLRNRLSGVNGKNKRVKEKEQKIWSEIGMIAGAFALLDVIIR
                     GIMFEFPFKEWAASLVFLFIIILYYCIRAAASGMLMPRIDTKEELQKRVKQQRIESIA
                     VAFAVVVLTMYDRGIPHTFFAWLKMILLFIVCGGVLFLLRYVIVKLAYRRAVKEEIKK
                     KSSFLFGKRGKRSQFRAAFFIGTLICIHSAKLF"
     gene            327618..329597
                     /gene="amyE"
                     /locus_tag="BSU03040"
                     /db_xref="GeneID:938356"
     CDS             327618..329597
                     /gene="amyE"
                     /locus_tag="BSU03040"
                     /EC_number="3.2.1.1"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 3117969, 9353930; Product
                     type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="NP_388186.2"
                     /db_xref="GI:255767082"
                     /db_xref="GeneID:938356"
                     /translation="MFAKRFKTSLLPLFAGFLLLFHLVLAGPAAASAETANKSNELTA
                     PSIKSGTILHAWNWSFNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWL
                     YQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTTSDYAAISNEVKSIPN
                     WTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLDRALNDGADGFRFDA
                     AKHIELPDDGSYGSQFWPNITNTSAEFQYGEILQDSASRDAAYANYMDVTASNYGHSI
                     RSALKNRNLGVSNISHYASDVSADKLVTWVESHDTYANDDEESTWMSDDDIRLGWAVI
                     ASRSGSTPLFFSRPEGGGNGVRFPGKSQIGDRGSALFEDQAITAVNRFHNVMAGQPEE
                     LSNPNGNNQIFMNQRGSHGVVLANAGSSSVSINTATKLPDGRYDNKAGAGSFQVNDGK
                     LTGTINARSVAVLYPDDIAKAPHVFLENYKTGVTHSFNDQLTITLRADANTTKAVYQI
                     NNGPETAFKDGDQFTIGKGDPFGKTYTIMLKGTNSDGVTRTEKYSFVKRDPASAKTIG
                     YQNPNHWSQVNAYIYKHDGSRVIELTGSWPGKPMTKNADGIYTLTLPADTDTTNAKVI
                     FNNGSAQVPGQNQPGFDYVLNGLYNDSGLSGSLPH"
     misc_feature    327765..328796
                     /gene="amyE"
                     /locus_tag="BSU03040"
                     /note="Alpha amylase catalytic domain found in bacterial
                     Alpha-amylases (also called
                     1,4-alpha-D-glucan-4-glucanohydrolase); Region:
                     AmyAc_bac1_AmyA; cd11315"
                     /db_xref="CDD:200454"
     misc_feature    327783..328691
                     /gene="amyE"
                     /locus_tag="BSU03040"
                     /note="Alpha amylase, catalytic domain; Region:
                     Alpha-amylase; pfam00128"
                     /db_xref="CDD:249612"
     misc_feature    order(327912..327917,327924..327929,328044..328046,
                     328053..328055,328128..328130,328260..328262,
                     328266..328271,328275..328280,328362..328364,
                     328368..328370,328374..328376,328542..328547,
                     328557..328559)
                     /gene="amyE"
                     /locus_tag="BSU03040"
                     /note="active site"
                     /db_xref="CDD:200454"
     misc_feature    order(328041..328043,328176..328178,328251..328253)
                     /gene="amyE"
                     /locus_tag="BSU03040"
                     /note="Ca binding site [ion binding]; other site"
                     /db_xref="CDD:200454"
     misc_feature    order(328266..328268,328362..328364,328545..328547)
                     /gene="amyE"
                     /locus_tag="BSU03040"
                     /note="catalytic site [active]"
                     /db_xref="CDD:200454"
     misc_feature    328797..329018
                     /gene="amyE"
                     /locus_tag="BSU03040"
                     /note="Aamy_C domain; Region: Aamy_C; smart00632"
                     /db_xref="CDD:214749"
     gene            329774..330739
                     /gene="ldh"
                     /locus_tag="BSU03050"
                     /db_xref="GeneID:938348"
     CDS             329774..330739
                     /gene="ldh"
                     /locus_tag="BSU03050"
                     /EC_number="1.1.1.27"
                     /function="16.10: Respire"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Converts (S)-lactate and NAD(+) to pyruvate and
                     NADH"
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="NP_388187.2"
                     /db_xref="GI:255767083"
                     /db_xref="GeneID:938348"
                     /translation="MMNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKA
                     MGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKI
                     FKGIVSEVMASGFDGIFLVATNPVDILTYATWKFSGLPKERVIGSGTTLDSARFRFML
                     SEYFGAAPQNVHAHIIGEHGDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDD
                     VKNAAYHIIEKKGATYYGVAMSLARITKAILHNENSILTVSTYLDGQYGADDVYIGVP
                     AVVNRGGIAGITELNLNEKEKEQFLHSAGVLKNILKPHFAEQKVN"
     misc_feature    329774..330721
                     /gene="ldh"
                     /locus_tag="BSU03050"
                     /note="L-lactate dehydrogenase; Reviewed; Region: ldh;
                     PRK00066"
                     /db_xref="CDD:178836"
     misc_feature    329792..330709
                     /gene="ldh"
                     /locus_tag="BSU03050"
                     /note="L-2-hydroxyisocapronate dehydrogenases and some
                     bacterial L-lactate dehydrogenases; Region: HicDH_like;
                     cd05291"
                     /db_xref="CDD:133427"
     misc_feature    order(329792..329794,329867..329869,329954..329956,
                     330266..330268,330272..330274,330281..330283,
                     330338..330340,330353..330358,330518..330532,
                     330536..330538,330614..330616,330638..330643)
                     /gene="ldh"
                     /locus_tag="BSU03050"
                     /note="tetramer (dimer of dimers) interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:133427"
     misc_feature    order(329816..329824,329885..329890,330014..330025,
                     330137..330145,330212..330214,330308..330310)
                     /gene="ldh"
                     /locus_tag="BSU03050"
                     /note="NAD binding site [chemical binding]; other site"
                     /db_xref="CDD:133427"
     misc_feature    order(329828..329833,329840..329842,329852..329857,
                     329912..329914,329918..329932,329939..329944,
                     330233..330238,330242..330244,330278..330280,
                     330458..330463,330473..330481,330488..330490,
                     330500..330502)
                     /gene="ldh"
                     /locus_tag="BSU03050"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:133427"
     misc_feature    order(330047..330049,330143..330145,330236..330238,
                     330308..330310,330440..330442,330470..330472)
                     /gene="ldh"
                     /locus_tag="BSU03050"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:133427"
     gene            330771..332396
                     /gene="lctP"
                     /locus_tag="BSU03060"
                     /db_xref="GeneID:938353"
     CDS             330771..332396
                     /gene="lctP"
                     /locus_tag="BSU03060"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10809684, 15849754,
                     16428414, 16850406; Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="NP_388188.2"
                     /db_xref="GI:255767084"
                     /db_xref="GeneID:938353"
                     /translation="MWEQLYDPFGNEYVSALVALTPILFFLLALTVLKMKGILAAFLT
                     LAVSFFVSVWAFHMPVEKAISSVLLGIGSGLWPIGYIVLMAVWLYKIAVKTGKFTIIR
                     SSIAGISPDQRLQLLLIGFCFNAFLEGAAGFGVPIAISAALLVELGFKPLKAAALCLI
                     ANAASGAFGAIGIPVITGAQIGDLSALELSRTLMWTLPMISFLIPFLLVFLLDRMKGI
                     KQTWPALLVVSGGYTAVQTLTMAVLGPELANILAALFSMGGLALFLRKWQPKEIYREE
                     GAGDAGEKKAYRAADIAKAWSPFYILTAAITIWSLPAFKALFQEGGLLYQSTLLFKMP
                     FLHQQIMKMPPIAPSAMPLDAVFKVDLLSATGTAILAAVIVTGLFSKKFSSRDAFASL
                     KETGKELWVPIMTICFVMGFANLANFAGLSSSIGLALAKTGDLFPFVSPVLGWIGVFI
                     TGSVVSNNALFGHLQVVTGAQIGAGSDLLLAANTAGGVMAKLVSPQSIAIAAAAVGQT
                     GKESKLFKRTVAYSLILLLIICIWTFILARLGV"
     misc_feature    330810..332378
                     /gene="lctP"
                     /locus_tag="BSU03060"
                     /note="L-lactate permease; Region: Lactate_perm;
                     pfam02652"
                     /db_xref="CDD:145679"
     gene            complement(332441..333979)
                     /gene="mdr"
                     /locus_tag="BSU03070"
                     /db_xref="GeneID:938345"
     CDS             complement(332441..333979)
                     /gene="mdr"
                     /locus_tag="BSU03070"
                     /function="16.1: Circulate"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15489457, 15849754,
                     16850406, 9023234; Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug resistance protein"
                     /protein_id="NP_388189.2"
                     /db_xref="GI:255767085"
                     /db_xref="GeneID:938345"
                     /translation="MDTTTAKQASTKFVVLGLLLGILMSAMDNTIVATAMGNIVADLG
                     SFDKFAWVTASYMVAVMAGMPIYGKLSDMYGRKRFFLFGLIFFLIGSALCGIAQTMNQ
                     LIIFRAIQGIGGGALLPIAFTIIFDLFPPEKRGKMSGMFGAVFGLSSVLGPLLGAIIT
                     DSISWHWVFYINVPIGALSLFFIIRYYKESLEHRKQKIDWGGAITLVVSIVCLMFALE
                     LGGKTYDWNSIQIIGLFIVFAVFFIAFFIVERKAEEPIISFWMFKNRLFATAQILAFL
                     YGGTFIILAVFIPIFVQAVYGSSATSAGFILTPMMIGSVIGSMIGGIFQTKASFRNLM
                     LISVIAFFIGMLLLSNMTPDTARVWLTVFMMISGFGVGFNFSLLPAASMNDLEPRFRG
                     TANSTNSFLRSFGMTLGVTIFGTVQTNVFTNKLNDAFSGMKGSAGSGAAQNIGDPQEI
                     FQAGTRSQIPDAILNRIIDAMSSSITYVFLLALIPIVLAAVTILFMGKARVKTTAEMT
                     KKAN"
     misc_feature    complement(332720..333910)
                     /gene="mdr"
                     /locus_tag="BSU03070"
                     /note="The Major Facilitator Superfamily (MFS) is a large
                     and diverse group of secondary transporters that includes
                     uniporters, symporters, and antiporters. MFS proteins
                     facilitate the transport across cytoplasmic or internal
                     membranes of a variety of...; Region: MFS; cd06174"
                     /db_xref="CDD:119392"
     misc_feature    complement(332753..333910)
                     /gene="mdr"
                     /locus_tag="BSU03070"
                     /note="Major Facilitator Superfamily; Region: MFS_1;
                     pfam07690"
                     /db_xref="CDD:254360"
     misc_feature    complement(order(332762..332764,332771..332776,
                     332783..332788,332795..332800,332831..332833,
                     332840..332845,332855..332857,332864..332869,
                     332876..332878,333026..333028,333038..333040,
                     333047..333049,333059..333061,333071..333073,
                     333113..333115,333122..333127,333134..333139,
                     333146..333148,333533..333535,333551..333556,
                     333563..333568,333602..333604,333611..333616,
                     333623..333628,333635..333640,333776..333781,
                     333785..333790,333800..333802,333809..333814,
                     333821..333823,333869..333874,333878..333886,
                     333893..333895))
                     /gene="mdr"
                     /locus_tag="BSU03070"
                     /note="putative substrate translocation pore; other site"
                     /db_xref="CDD:119392"
     gene            334092..334556
                     /gene="ycgE"
                     /locus_tag="BSU03080"
                     /db_xref="GeneID:938352"
     CDS             334092..334556
                     /gene="ycgE"
                     /locus_tag="BSU03080"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pr:  regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="NP_388190.2"
                     /db_xref="GI:255767086"
                     /db_xref="GeneID:938352"
                     /translation="MSTRNSRSELEKTAVQLFRKLGTRTVLFHQAAAQALGLFPTDLK
                     SADILNEAGPMTAGELGKKTGLSTGSVTALVDRLEKAGYVAREKDPNDRRRVVIVPLT
                     ASKKHIKDLFRPLSESTMDLCREYTEEELELIFSFVGKAADIMEEELERLKQ"
     misc_feature    334143..334487
                     /gene="ycgE"
                     /locus_tag="BSU03080"
                     /note="Predicted transcriptional regulator
                     [Transcription]; Region: COG3355"
                     /db_xref="CDD:225891"
     misc_feature    334209..>334364
                     /gene="ycgE"
                     /locus_tag="BSU03080"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; Region: HTH_ARSR;
                     cd00090"
                     /db_xref="CDD:238042"
     misc_feature    order(334209..334217,334257..334265,334290..334301,
                     334305..334310,334317..334322,334326..334331,
                     334347..334355)
                     /gene="ycgE"
                     /locus_tag="BSU03080"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238042"
     misc_feature    order(334257..334259,334266..334268)
                     /gene="ycgE"
                     /locus_tag="BSU03080"
                     /note="putative Zn2+ binding site [ion binding]; other
                     site"
                     /db_xref="CDD:238042"
     gene            334630..335259
                     /gene="ycgF"
                     /locus_tag="BSU03090"
                     /db_xref="GeneID:938349"
     CDS             334630..335259
                     /gene="ycgF"
                     /locus_tag="BSU03090"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid efflux protein YcgF"
                     /protein_id="NP_388191.1"
                     /db_xref="GI:16077378"
                     /db_xref="GeneID:938349"
                     /translation="MNIFLSYIVLGLSLSAPVGPVNAAQIDKGIKNGFWHAWIFGLGA
                     MTADGLYMLFIYFGLSQFLTAPFVKTFLWLFGFFVLTYTGIETLKNVREPMDVRSSRG
                     KPSYRKTFASGFLISLSNPLSILFWLGIYGSILAKTAEAYNMNQLLIYSSGIMIGILI
                     WDFCMAITASTFRNLLHEKLLRGLTGIAGVSLLVFGFYFGYQGIKQLLG"
     misc_feature    334663..335238
                     /gene="ycgF"
                     /locus_tag="BSU03090"
                     /note="LysE type translocator; Region: LysE; pfam01810"
                     /db_xref="CDD:250884"
     gene            335329..336090
                     /gene="ycgG"
                     /locus_tag="BSU03100"
                     /db_xref="GeneID:938350"
     CDS             335329..336090
                     /gene="ycgG"
                     /locus_tag="BSU03100"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388192.2"
                     /db_xref="GI:255767087"
                     /db_xref="GeneID:938350"
                     /translation="MVNGIYTKSFLERIQEELPEWQRIAFELLAETLGDDADTFPCIP
                     GRQAFLTDQLRIAFAGDPRENRTAEELAPLLAEYGKISRDTGKYASLVVLFDTPEDLA
                     EHYSIEAYEELFWRFLNRLSHQDEKEWPEDIPADPEHYKWEFCFDGEPYFILCATPGH
                     EARRSRSFPFFMVTFQPRWVFDDLNGSTAFGRNMSRLIRSRLEAYDQAPIHPQLGWYG
                     GKDNREWKQYFLRDDEKQVSKCPFSYLKNMFNKMK"
     misc_feature    335329..336087
                     /gene="ycgG"
                     /locus_tag="BSU03100"
                     /note="Uncharacterized conserved protein [Function
                     unknown]; Region: COG3403"
                     /db_xref="CDD:225938"
     gene            complement(336092..337432)
                     /gene="ycgH"
                     /locus_tag="BSU03110"
                     /db_xref="GeneID:938347"
     CDS             complement(336092..337432)
                     /gene="ycgH"
                     /locus_tag="BSU03110"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="NP_388193.2"
                     /db_xref="GI:255767088"
                     /db_xref="GeneID:938347"
                     /translation="MSQTKKDQPKGNLAWWQLSLIGVGCTIGTGFFLGSSIAIVKSGF
                     SVLLSFLIAGIGTYFVFEQLAKLSAKQPEKGSFCAYARKAFGKWAGFSNGWVYWTSEM
                     LITGSQLTAISLFTKHWFPQVPLWVFASIYAVLGLLIIFTGLSVFEKTENVLAVIKTA
                     AIFMFIVIAILALCGILSGGNHGIHVPNKTSEFFPYGAMGLWTGLIYAFYAFGGIEVM
                     GLMAVHLKKPEEASKSGKLMLATLAIIYIISIGLALLLVPLHTFTEQDSPFITSLKGY
                     NLEIILDIFNGIFIIAGFSTLVASLFAVTTLLCTMADDGDAPKCFTLKEGKKICWPAL
                     GLTFAGLVLSIILSLVLPKNIYEHMTTAAGLMLLYTWLFILFSSKKLTDPEGMGKTQI
                     YLAMVLIAAAVSGTLFEKSSRPGFFVSIGFLVIIAIVTMIYQKKQGHKDRPASP"
     misc_feature    complement(336113..337405)
                     /gene="ycgH"
                     /locus_tag="BSU03110"
                     /note="Gamma-aminobutyrate permease and related permeases
                     [Amino acid transport and metabolism]; Region: AnsP;
                     COG1113"
                     /db_xref="CDD:224038"
     misc_feature    complement(336518..337384)
                     /gene="ycgH"
                     /locus_tag="BSU03110"
                     /note="Spore germination protein; Region: Spore_permease;
                     cl17796"
                     /db_xref="CDD:266844"
     gene            337562..338158
                     /gene="ycgI"
                     /locus_tag="BSU03120"
                     /db_xref="GeneID:938342"
     CDS             337562..338158
                     /gene="ycgI"
                     /locus_tag="BSU03120"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 16433904; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388194.3"
                     /db_xref="GI:255767089"
                     /db_xref="GeneID:938342"
                     /translation="MTQQYIVEPKKGLGLKLKKGQILKVVDVEGQQVADFVAYHAKDF
                     YEHLDQGATIDANHSIHVKVNDHLYSNLYKPMLTLIEDTVGKHDLLLPACRPDMNRLL
                     YGKQKDEFQDTCYDNMNRALEQFGVPKPHMHYPFAIFMNTVLDEKGNLSVETPLSNAG
                     DYVRLRAEMDLIVAFSSCPIEKGKCNGDSVTSIRVEVS"
     misc_feature    337562..338152
                     /gene="ycgI"
                     /locus_tag="BSU03120"
                     /note="Domain of unknown function (DUF1989); Region:
                     DUF1989; cl01474"
                     /db_xref="CDD:260953"
     gene            338288..339106
                     /gene="nadE"
                     /locus_tag="BSU03130"
                     /db_xref="GeneID:938339"
     CDS             338288..339106
                     /gene="nadE"
                     /locus_tag="BSU03130"
                     /EC_number="6.3.1.5"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the formation of nicotinamide adenine
                     dinucleotide (NAD) from nicotinic acid adenine
                     dinucleotide (NAAD) using either ammonia or glutamine as
                     the amide donor and ATP; ammonia-utilizing enzymes include
                     the ones from Bacillus and Escherichia coli while
                     glutamine-utilizing enzymes include the Mycobacterial one;
                     forms homodimers"
                     /codon_start=1
                     /transl_table=11
                     /product="NH(3)-dependent NAD(+) synthetase"
                     /protein_id="NP_388195.1"
                     /db_xref="GI:16077382"
                     /db_xref="GeneID:938339"
                     /translation="MSMQEKIMRELHVKPSIDPKQEIEDRVNFLKQYVKKTGAKGFVL
                     GISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQQDEDDAQLALKFIKPDK
                     SWKFDIKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDH
                     AAEAVTGFFTKYGDGGADLLPLTGLTKRQGRTLLKELGAPERLYLKEPTADLLDEKPQ
                     QSDETELGISYDEIDDYLEGKEVSAKVSEALEKRYSMTEHKRQVPASMFDDWWK"
     misc_feature    338336..339067
                     /gene="nadE"
                     /locus_tag="BSU03130"
                     /note="NAD+ synthase is a homodimer, which catalyzes the
                     final step in de novo nicotinamide adenine dinucleotide
                     (NAD+) biosynthesis, an amide transfer from either ammonia
                     or glutamine to nicotinic acid adenine dinucleotide
                     (NaAD). The conversion of NaAD to NAD...; Region:
                     NAD_synthase; cd00553"
                     /db_xref="CDD:238309"
     misc_feature    order(338360..338365,338372..338374,338381..338386,
                     338597..338605,338609..338614,338621..338626,
                     338678..338680,338690..338692,338699..338704,
                     338708..338716,338720..338728,338732..338737,
                     338798..338803,338810..338827,338834..338839,
                     339059..339061,339065..339067)
                     /gene="nadE"
                     /locus_tag="BSU03130"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238309"
     misc_feature    order(338417..338428,338441..338443,338519..338527,
                     338675..338677,338687..338689,338696..338701,
                     338705..338707,338759..338761,338774..338776,
                     338789..338800,338807..338809,338912..338917,
                     338921..338923,338957..338959,339059..339064)
                     /gene="nadE"
                     /locus_tag="BSU03130"
                     /note="NAD binding pocket [chemical binding]; other site"
                     /db_xref="CDD:238309"
     misc_feature    order(338420..338428,338438..338443,338522..338527,
                     338705..338707,338759..338761,338846..338848,
                     338909..338914)
                     /gene="nadE"
                     /locus_tag="BSU03130"
                     /note="ATP binding pocket [chemical binding]; other site"
                     /db_xref="CDD:238309"
     misc_feature    order(338426..338428,338438..338440,338774..338776,
                     338912..338914)
                     /gene="nadE"
                     /locus_tag="BSU03130"
                     /note="Mg binding site [ion binding]; other site"
                     /db_xref="CDD:238309"
     misc_feature    order(338549..338551,338900..338923,338939..338962)
                     /gene="nadE"
                     /locus_tag="BSU03130"
                     /note="active-site loop [active]"
                     /db_xref="CDD:238309"
     gene            complement(339156..339749)
                     /gene="tmrB"
                     /locus_tag="BSU03140"
                     /db_xref="GeneID:938346"
     CDS             complement(339156..339749)
                     /gene="tmrB"
                     /locus_tag="BSU03140"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15131133, 1624425,
                     7766032; Product type f: factor"
                     /codon_start=1
                     /transl_table=11
                     /product="tunicamycin resistance protein"
                     /protein_id="NP_388196.2"
                     /db_xref="GI:255767090"
                     /db_xref="GeneID:938346"
                     /translation="MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVP
                     QEIAKDDFQSYPLWRAFNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRI
                     VHHFTLMASKETLLKRLRTRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDV
                     AENIAARAELPLDPDTRGSLRRFADRLMVKLNHIRIK"
     misc_feature    complement(339384..339743)
                     /gene="tmrB"
                     /locus_tag="BSU03140"
                     /note="AAA domain; Region: AAA_18; pfam13238"
                     /db_xref="CDD:257595"
     gene            340025..340585
                     /gene="aroK"
                     /locus_tag="BSU03150"
                     /db_xref="GeneID:938343"
     CDS             340025..340585
                     /gene="aroK"
                     /locus_tag="BSU03150"
                     /EC_number="2.7.1.71"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the formation of shikimate 3-phosphate
                     from shikimate in aromatic amino acid biosynthesis"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="NP_388197.2"
                     /db_xref="GI:255767091"
                     /db_xref="GeneID:938343"
                     /translation="MNAKRAIPVRERNIVLIGFMGVGKTTIGQLVAKKLYRDFIDIDQ
                     QIEKDFNMSIPEIFEKKGEDFFRKTEKEYILDICHHKRFKIVSLGGGSFKQEEIRNCC
                     LENCLVLHLDLSWENWKQRADLLIESRPVLHNRSMDEMEQLFNERKVIYDKHNSKVAT
                     DNLSPEEVADYIVETLKIGWDLYQPM"
     misc_feature    340052..340567
                     /gene="aroK"
                     /locus_tag="BSU03150"
                     /note="Shikimate kinase [Amino acid transport and
                     metabolism]; Region: AroK; COG0703"
                     /db_xref="CDD:223775"
     misc_feature    340061..340525
                     /gene="aroK"
                     /locus_tag="BSU03150"
                     /note="Shikimate kinase (SK) is the fifth enzyme in the
                     shikimate pathway, a seven-step biosynthetic pathway which
                     converts erythrose-4-phosphate to chorismic acid, found in
                     bacteria, fungi and plants. Chorismic acid is a important
                     intermediate in the synthesis...; Region: SK; cd00464"
                     /db_xref="CDD:238260"
     misc_feature    order(340085..340102,340385..340387,340409..340411,
                     340517..340519)
                     /gene="aroK"
                     /locus_tag="BSU03150"
                     /note="ADP binding site [chemical binding]; other site"
                     /db_xref="CDD:238260"
     misc_feature    order(340097..340099,340145..340147,340151..340153)
                     /gene="aroK"
                     /locus_tag="BSU03150"
                     /note="magnesium binding site [ion binding]; other site"
                     /db_xref="CDD:238260"
     misc_feature    order(340151..340153,340223..340225,340232..340234,
                     340289..340297,340463..340465)
                     /gene="aroK"
                     /locus_tag="BSU03150"
                     /note="putative shikimate binding site; other site"
                     /db_xref="CDD:238260"
     gene            complement(340613..341374)
                     /gene="ycgJ"
                     /locus_tag="BSU03160"
                     /db_xref="GeneID:938344"
     CDS             complement(340613..341374)
                     /gene="ycgJ"
                     /locus_tag="BSU03160"
                     /EC_number="2.1.-.-"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="NP_388198.2"
                     /db_xref="GI:255767092"
                     /db_xref="GeneID:938344"
                     /translation="MTNETPFSKNAEMYRDEKVFAEGEDLGLMIKTAECRAEHRVLDI
                     GAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDD
                     SFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLR
                     DPSHVRESSLSEWQAMFSANQLAYQDIQKWNLPIQYDSWIKRGGTPADREKQIITHLN
                     HASDEARDTFCITLNQNGQPISFCLKAILIQGIKR"
     misc_feature    complement(340946..341257)
                     /gene="ycgJ"
                     /locus_tag="BSU03160"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cd02440"
                     /db_xref="CDD:100107"
     misc_feature    complement(order(341045..341047,341093..341101,
                     341174..341179,341225..341245))
                     /gene="ycgJ"
                     /locus_tag="BSU03160"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     gene            341492..342466
                     /gene="ycgK"
                     /locus_tag="BSU03170"
                     /db_xref="GeneID:938340"
     CDS             341492..342466
                     /gene="ycgK"
                     /locus_tag="BSU03170"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 10939241; Product type pr :
                     regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="NP_388199.2"
                     /db_xref="GI:255767093"
                     /db_xref="GeneID:938340"
                     /translation="MDIKVMEYAAEIARRQSFTKAAEHLHIAQPSLSQQIKKLEAELG
                     LTLFHRSHGSVTLTPHGRRFIEKAEDIIRSRDDLLREMQERSQGIGHKLSIGIPAVTG
                     RYLFPPLLKQFLARYPHVEVQLVEKDPVSLEKMTAKGEVDLSVLSLPIEDERLSITPL
                     LTEPVVLAVPKEKQRWMPPELVALIEKALEEDEGRQPCVPIDMVRNVPFILLKEGFGF
                     RRTVLDLCAESGFKPNAAFKTSHIETAQSLVANGLGVTMAPNMVRRDKDPGVIYLSIQ
                     SAPSRTLVFVFLKNRYVSLTAQAFMELSRESLKQTFDEGCLGNKDENI"
     misc_feature    341492..342433
                     /gene="ycgK"
                     /locus_tag="BSU03170"
                     /note="Transcriptional regulator [Transcription]; Region:
                     LysR; COG0583"
                     /db_xref="CDD:223656"
     misc_feature    341498..341677
                     /gene="ycgK"
                     /locus_tag="BSU03170"
                     /note="Bacterial regulatory helix-turn-helix protein, lysR
                     family; Region: HTH_1; pfam00126"
                     /db_xref="CDD:249610"
     misc_feature    341765..342400
                     /gene="ycgK"
                     /locus_tag="BSU03170"
                     /note="The substrate binding domain of LysR-type
                     transcriptional regulators (LTTRs), a member of the type 2
                     periplasmic binding fold protein superfamily; Region:
                     PBP2_LTTR_substrate; cd05466"
                     /db_xref="CDD:176102"
     misc_feature    order(341810..341815,341819..341824,341831..341833,
                     341843..341845,341849..341869,342197..342214,
                     342230..342235,342239..342244)
                     /gene="ycgK"
                     /locus_tag="BSU03170"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:176102"
     gene            342538..343494
                     /gene="cah"
                     /locus_tag="BSU03180"
                     /db_xref="GeneID:938341"
     CDS             342538..343494
                     /gene="cah"
                     /locus_tag="BSU03180"
                     /EC_number="3.1.-.-"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 12842474; Product type e:
                     enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="cephalosporin-C deacetylase"
                     /protein_id="NP_388200.1"
                     /db_xref="GI:16077387"
                     /db_xref="GeneID:938341"
                     /translation="MQLFDLPLDQLQTYKPEKTAPKDFSEFWKLSLEELAKVQAEPDL
                     QPVDYPADGVKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEM
                     VNWALHGYATFGMLVRGQQSSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRA
                     LEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAIDVAL
                     EQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPST
                     VFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFKQHLKG"
     misc_feature    342538..343485
                     /gene="cah"
                     /locus_tag="BSU03180"
                     /note="Acetyl xylan esterase (AXE1); Region: AXE1;
                     pfam05448"
                     /db_xref="CDD:253201"
     gene            343578..344360
                     /gene="ycgL"
                     /locus_tag="BSU03190"
                     /db_xref="GeneID:938336"
     CDS             343578..344360
                     /gene="ycgL"
                     /locus_tag="BSU03190"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388201.1"
                     /db_xref="GI:16077388"
                     /db_xref="GeneID:938336"
                     /translation="MKQRIIDELKRIEQSYGVKIVYAVESGSRAWGFPSQDSDYDVRF
                     IYVPKKEWYFSIEQERDVIEEPIHDLLDISGWELRKTLRLFKKSNPPLLEWLSSDIVY
                     YEAFTTAEQLRKLRTEAFKPEASVYHYINMARRNVKDYLQGQEVKIKKYFYVLRPILA
                     CQWIEKHGTIPPMDFTVLMNELVAEPELKAEMETLLERKRRGEELDLEARIDVIHQFI
                     ETEIERIMEAAKELKAEKKDMTSELNRLLLNTVEEVWKDGGS"
     misc_feature    343578..344321
                     /gene="ycgL"
                     /locus_tag="BSU03190"
                     /note="Predicted nucleotidyltransferase; Region:
                     Nuc-transf; pfam10127"
                     /db_xref="CDD:255774"
     gene            344551..345462
                     /gene="ycgM"
                     /locus_tag="BSU03200"
                     /db_xref="GeneID:938338"
     CDS             344551..345462
                     /gene="ycgM"
                     /locus_tag="BSU03200"
                     /EC_number="1.5.1.2"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1b: Function experimentally demonstrated
                     in the studied species; PubMedId: 17536821, 2118500;
                     Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase 2"
                     /protein_id="NP_388202.1"
                     /db_xref="GI:16077389"
                     /db_xref="GeneID:938338"
                     /translation="MITRDFFLFLSKSGFLNKMARNWGSRVAAGKIIGGNDFNSSIPT
                     IRQLNSQGLSVTVDHLGEFVNSAEVARERTEECIQTIATIADQELNSHVSLKMTSLGL
                     DIDMDLVYENMTKILQTAEKHKIMVTIDMEDEVRCQKTLDIFKDFRKKYEHVSTVLQA
                     YLYRTEKDIDDLDSLNPFLRLVKGAYKESEKVAFPEKSDVDENYKKIIRKQLLNGHYT
                     AIATHDDKMIDFTKQLAKEHGIANDKFEFQMLYGMRSQTQLSLVKEGYNMRVYLPYGE
                     DWYGYFMRRLAERPSNIAFAFKGMTKK"
     misc_feature    344551..345459
                     /gene="ycgM"
                     /locus_tag="BSU03200"
                     /note="Proline dehydrogenase [Amino acid transport and
                     metabolism]; Region: PutA; COG0506"
                     /db_xref="CDD:223580"
     misc_feature    344647..345459
                     /gene="ycgM"
                     /locus_tag="BSU03200"
                     /note="Proline dehydrogenase; Region: Pro_dh; pfam01619"
                     /db_xref="CDD:250750"
     gene            345479..347026
                     /gene="ycgN"
                     /locus_tag="BSU03210"
                     /db_xref="GeneID:938333"
     CDS             345479..347026
                     /gene="ycgN"
                     /locus_tag="BSU03210"
                     /EC_number="1.5.1.12"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="catalyzes the conversion of 1-proline-5-carboxylate
                     dehydrogenase to L-glutamate"
                     /codon_start=1
                     /transl_table=11
                     /product="1-pyrroline-5-carboxylate dehydrogenase 2"
                     /protein_id="NP_388203.2"
                     /db_xref="GI:255767094"
                     /db_xref="GeneID:938333"
                     /translation="MTTPYKHEPFTNFQDQNNVEAFKKALATVSEYLGKDYPLVINGE
                     RVETEAKIVSINPADKEEVVGRVSKASQEHAEQAIQAAAKAFEEWRYTSPEERAAVLF
                     RAAAKVRRRKHEFSALLVKEAGKPWNEADADTAEAIDFMEYYARQMIELAKGKPVNSR
                     EGEKNQYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASATPVIAAKFV
                     EVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPG
                     QQHLKRVIAEMGGKDTVVVDEDADIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYD
                     QVLERVIEITESKVTAKPDSADVYMGPVIDQGSYDKIMSYIEIGKQEGRLVSGGTGDD
                     SKGYFIKPTIFADLDPKARLMQEEIFGPVVAFCKVSDFDEALEVANNTEYGLTGAVIT
                     NNRKHIERAKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQA
                     KTISEMF"
     misc_feature    345491..347023
                     /gene="ycgN"
                     /locus_tag="BSU03210"
                     /note="Delta(1)-pyrroline-5-carboxylate dehydrogenase,
                     RocA; Region: ALDH_PutA-P5CDH-RocA; cd07124"
                     /db_xref="CDD:143442"
     misc_feature    order(345884..345886,346022..346027,346037..346039,
                     346334..346336,346430..346441,346883..346885,
                     346898..346900,346904..346909,346928..346930)
                     /gene="ycgN"
                     /locus_tag="BSU03210"
                     /note="Glutamate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:143442"
     misc_feature    order(345950..345952,345956..345958,345971..345979,
                     345983..345985,346277..346282,346289..346291,
                     346319..346321,346835..346837,346856..346858,
                     346865..346867,346871..346888,346892..346894,
                     346910..346912,346916..346927,346937..346942,
                     346955..346957,346961..346963,346976..346978,
                     346985..346987,346997..347020)
                     /gene="ycgN"
                     /locus_tag="BSU03210"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:143442"
     misc_feature    order(346010..346015,346091..346093,346097..346102,
                     346190..346192,346244..346246,346253..346255,
                     346262..346264)
                     /gene="ycgN"
                     /locus_tag="BSU03210"
                     /note="NAD binding site [chemical binding]; other site"
                     /db_xref="CDD:143442"
     misc_feature    order(346022..346024,346334..346336,346427..346429,
                     346436..346438)
                     /gene="ycgN"
                     /locus_tag="BSU03210"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143442"
     gene            347150..348571
                     /gene="ycgO"
                     /locus_tag="BSU03220"
                     /db_xref="GeneID:938330"
     CDS             347150..348571
                     /gene="ycgO"
                     /locus_tag="BSU03220"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 14976255, 15849754, 16850406; Product
                     type pt:  transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="symporter"
                     /protein_id="NP_388204.2"
                     /db_xref="GI:255767095"
                     /db_xref="GeneID:938330"
                     /translation="MLLIGYFAYKRTSNLTDYMLGGRSLGPAVTALSAGAADMSGWLL
                     MGLPGAMFSTGLSGAWIVIGLCLGAWANWLYVAPRLRTYTEKAGNSITIPGFLENRFG
                     DQTKLLRLFSGIVILVFFTFYVSSGMVSGGVLFNSILGMDYHTGLWIVTGVVVAYTLF
                     GGFLAVSWTDFVQGIIMFAALILVPIVTFFHTGGAGDTVAEIRSVDPDMFNIFKGTSV
                     LGIISLFAWGLGYFGQPHIIVRFMAITSVKEIKRARRIGMGWMILSAVGAVLTGLGGI
                     AYYHQRGMTLKDPETIFIQLGNILFHPIITGFLISAILAAIMSTISSQLLVTSSSLVE
                     DLYKSMFRRSASDKELVFLGRLAVLAVSIVALVLAWEKNNTILGLVSYAWAGFGASFG
                     PVVLLSLFWKRMTKWGALAGMIVGAATVIIWANAGLSDFLYEMIPGFAASLLSVFFVS
                     ILTQAPSQAVTDQFNDYQDTMSQ"
     misc_feature    347150..348505
                     /gene="ycgO"
                     /locus_tag="BSU03220"
                     /note="Na(+)/proline cotransporter PutP and related
                     proteins; solute binding domain; Region: SLC5sbd_PutP;
                     cd11475"
                     /db_xref="CDD:212045"
     misc_feature    order(347255..347257,347264..347266,348095..348097,
                     348104..348109)
                     /gene="ycgO"
                     /locus_tag="BSU03220"
                     /note="Na binding site [ion binding]; other site"
                     /db_xref="CDD:212045"
     gene            348724..349959
                     /gene="ycgP"
                     /locus_tag="BSU03230"
                     /db_xref="GeneID:938337"
     CDS             348724..349959
                     /gene="ycgP"
                     /locus_tag="BSU03230"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pr:  regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388205.2"
                     /db_xref="GI:255767096"
                     /db_xref="GeneID:938337"
                     /translation="MEELLERVFSFSDVDKLIDFISYELQKPVILESADFFLLAYNSY
                     YINHFDSANQQTIFSKKCPVQIFERFLKDGIIEKLKTEPEPFRVNKIESIGLNQRVVV
                     SAKHKGEVMGYIWIQELDQNLTDEELDFLYETSFHVGKIIYKTNKLKQEKEEKAEDLI
                     KRAIYQQFTSEKELRREAERINTVLPSMFSVVILHAANGDGEAVEDLKENIRSYLNLR
                     DKVSHVLTIESNIVIVVASFSQKSSVSSAASEFINKLLTHFHFQKIPTPIYIGIGNEY
                     NHLLKLGKSYTEALEVIKAAEITGNQENIPYEYAKLGIYRYLESIEQKNEFLEYENKD
                     LALLKAKDEESSTELLKTLEIYLLNNCKTKPAAEQLFIHQNTLNYRIKQITEMTSIDL
                     SDFRTRCQLYLDLMLMKKK"
     misc_feature    348724..349950
                     /gene="ycgP"
                     /locus_tag="BSU03230"
                     /note="Regulator of polyketide synthase expression [Signal
                     transduction mechanisms / Secondary metabolites
                     biosynthesis, transport, and catabolism]; Region: COG2508"
                     /db_xref="CDD:225306"
     misc_feature    349777..349944
                     /gene="ycgP"
                     /locus_tag="BSU03230"
                     /note="PucR C-terminal helix-turn-helix domain; Region:
                     HTH_30; pfam13556"
                     /db_xref="CDD:257873"
     gene            complement(349996..350853)
                     /gene="ycgQ"
                     /locus_tag="BSU03240"
                     /db_xref="GeneID:938334"
     CDS             complement(349996..350853)
                     /gene="ycgQ"
                     /locus_tag="BSU03240"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 4: Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388206.1"
                     /db_xref="GI:16077393"
                     /db_xref="GeneID:938334"
                     /translation="MFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAI
                     LTAVQAYLFIKSPEKSGHHHDHDCGCGHDHEHDHEQNKPFYQRYLIYVVFLFPLVSGI
                     FFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKY
                     SSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYKGNAINKNQLFVLRFGIIH
                     CIADSGVYGMLVEFPKDMDIKDDEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKP
                     DDPYVYRGF"
     misc_feature    complement(349999..350853)
                     /gene="ycgQ"
                     /locus_tag="BSU03240"
                     /note="Predicted membrane protein [Function unknown];
                     Region: COG3689"
                     /db_xref="CDD:226214"
     gene            complement(350858..351742)
                     /gene="ycgR"
                     /locus_tag="BSU03250"
                     /db_xref="GeneID:938335"
     CDS             complement(350858..351742)
                     /gene="ycgR"
                     /locus_tag="BSU03250"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388207.1"
                     /db_xref="GI:16077394"
                     /db_xref="GeneID:938335"
                     /translation="MTAQSSFLQLNSIFISILIEAIPFILIGVILSGIIQMFVSEEMI
                     ARIMPKNRFLAVLFGALAGVLFPACECGIIPITRRLLLKGVPLHAGVAFMLTAPIINP
                     IVLFSTYIAFGNRWSVVFYRGGLALAVSLIIGVILSYQFKDNQLLKPDEPGHHHHHHG
                     TLLQKLGGTLRHAIDEFFSVGKYLIIGAFIAAAMQTYVKTSTLLAIGQNDVSSSLVMM
                     GLAFVLSLCSEVDAFIASSFSSTFSLGSLIAFLVFGAMVDIKNLLMMLAAFKKRFVFL
                     LITYIVVIVLAGSLLVKG"
     misc_feature    complement(350867..351733)
                     /gene="ycgR"
                     /locus_tag="BSU03250"
                     /note="Predicted permeases [General function prediction
                     only]; Region: COG0701"
                     /db_xref="CDD:223773"
     gene            complement(351842..352696)
                     /gene="ycgS"
                     /locus_tag="BSU03260"
                     /db_xref="GeneID:938332"
     CDS             complement(351842..352696)
                     /gene="ycgS"
                     /locus_tag="BSU03260"
                     /EC_number="3.7.1.-"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pe:  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase YcgS"
                     /protein_id="NP_388208.1"
                     /db_xref="GI:16077395"
                     /db_xref="GeneID:938332"
                     /translation="MKRRVETITFDGGTLEYSVTGKGTPILVMHGGHSNCYEEFGYTA
                     LIEQGYSIITPSRPGYGRTSKEIGKSLANACRFYVKLLDHLQIESVHVIAISAGGPSG
                     ICFASHYPERVNTLTLQSAVTKEWLTPKDTEYKLGEILFRPPVEKWIWKLISSLNNAF
                     PRLMFRAMSPQFSTLPFQRIKSLMNEKDIEAFRKMNSRQRSGEGFLIDLSQTAAVSLK
                     DLQAIICPVLIMQSVYDGLVDLSHAHHAKEHIRGAVLCLLHSWGHLIWLGKEAAETGS
                     ILLGFLES"
     misc_feature    complement(351845..352687)
                     /gene="ycgS"
                     /locus_tag="BSU03260"
                     /note="Predicted hydrolases or acyltransferases
                     (alpha/beta hydrolase superfamily) [General function
                     prediction only]; Region: MhpC; COG0596"
                     /db_xref="CDD:223669"
     misc_feature    complement(<352334..>352456)
                     /gene="ycgS"
                     /locus_tag="BSU03260"
                     /note="Putative lysophospholipase; Region: Hydrolase_4;
                     cl19140"
                     /db_xref="CDD:267493"
     gene            352858..353868
                     /gene="ycgT"
                     /locus_tag="BSU03270"
                     /db_xref="GeneID:938327"
     CDS             352858..353868
                     /gene="ycgT"
                     /locus_tag="BSU03270"
                     /EC_number="1.8.1.-"
                     /function="16.8: Protect"
                     /function="16.6: Maintain"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 16672620; Product type pe :  enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase 1"
                     /protein_id="NP_388209.1"
                     /db_xref="GI:16077396"
                     /db_xref="GeneID:938327"
                     /translation="MAENQEVYDVTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGG
                     KVSLFFPEKIIRDIGGIPGIAGKQLIEQLKEQAATFDPDIVLNQRVTGFERLDDGTIV
                     LTGSEGKKHYTRTVILACGMGTLEVNEFDSEDAARYAGKNLHYGVEKLDAFKGKRVVI
                     SGGGDTAVDWANELEPIAASVTVVHRREEFGGMESSVTKMKQSSVRVLTPYRLEQLNG
                     DEEGIKSVTVCHTESGQRKDIEIDELIINHGFKIDLGPMMEWGLEIEEGRVKADRHMR
                     TNLPGVFVAGDAAFYESKLRLIAGGFTEGPTAVNSAKAYLDPKAENMAMYSTHHKKLV
                     HK"
     misc_feature    352870..353820
                     /gene="ycgT"
                     /locus_tag="BSU03270"
                     /note="Thioredoxin reductase [Posttranslational
                     modification, protein turnover, chaperones]; Region: TrxB;
                     COG0492"
                     /db_xref="CDD:223566"
     misc_feature    352888..353421
                     /gene="ycgT"
                     /locus_tag="BSU03270"
                     /note="NAD(P)-binding Rossmann-like domain; Region:
                     NAD_binding_8; cl19134"
                     /db_xref="CDD:267487"
     misc_feature    353326..353538
                     /gene="ycgT"
                     /locus_tag="BSU03270"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     Region: Pyr_redox; pfam00070"
                     /db_xref="CDD:249559"
     gene            complement(353900..355351)
                     /gene="nasF"
                     /locus_tag="BSU03280"
                     /db_xref="GeneID:938324"
     CDS             complement(353900..355351)
                     /gene="nasF"
                     /locus_tag="BSU03280"
                     /EC_number="2.1.1.107"
                     /function="16.10: Respire"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10217486, 15028686,
                     9765565; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-iii C-methyltransferase"
                     /protein_id="NP_388210.1"
                     /db_xref="GI:16077397"
                     /db_xref="GeneID:938324"
                     /translation="MIMKNGIVYFVGAGPGDPGLLTIKGKQALKEADVILYDRLANPK
                     LLEFASPDCQFIYCGKLPNRHFMKQKEINALLVEKALNGLTVVRLKGGDPSVFGRVGE
                     EADALHEHGIRYEMVPGITSGIAAPLYAGIPVTHRDFASSFAMITAHDKSLKGTPNLD
                     WEGLARSVQTLVFYMGVKNLSYICQQLISYGKSPSVPVIVIQWGTWGRQRSVKGTLEN
                     IQQKVQEHQITNPAIIVIGDIVNFQTHSWFESKPLIGRHLMVVTHGEDEDPLADKLRD
                     SGADLIEWPKWRTENMPVNEEILRKIGTFEDVFFTSRRAVCEFFRALASQKIDIRQLT
                     AKLSAASEQAKTELEKRGFLVTAIQPDSEKRLVVGSRHAVENMQKHESCSFYITHENV
                     IDDRFTHMIQRTISESPLHMVICPNKLSVQQLINGGEQIGILPEPSASRPPIVCIGDD
                     SAAGIYGFTAVQEQDELLAFIHNQHAEKKLLHT"
     misc_feature    complement(354629..355330)
                     /gene="nasF"
                     /locus_tag="BSU03280"
                     /note="Uroporphyrin-III C-methyltransferase
                     (S-Adenosyl-L-methionine:uroporphyrinogen III
                     methyltransferase, SUMT); Region: SUMT; cd11642"
                     /db_xref="CDD:212501"
     misc_feature    complement(order(354653..354664,354734..354736,
                     354740..354745,354749..354751,354821..354835,
                     354905..354907,354911..354913,354974..354976,
                     354986..354991,355055..355066,355073..355081,
                     355232..355240,355307..355309))
                     /gene="nasF"
                     /locus_tag="BSU03280"
                     /note="active site"
                     /db_xref="CDD:212501"
     misc_feature    complement(order(354653..354661,354740..354745,
                     354749..354751,354830..354832,354986..354991,
                     355061..355066,355073..355081,355307..355309))
                     /gene="nasF"
                     /locus_tag="BSU03280"
                     /note="SAM binding site [chemical binding]; other site"
                     /db_xref="CDD:212501"
     misc_feature    complement(order(354917..354931,354941..354949,
                     354953..354955,354977..354982,354992..354994,
                     354998..355000,355004..355006,355025..355030,
                     355040..355042,355046..355051,355061..355069,
                     355073..355075,355274..355276,355280..355297))
                     /gene="nasF"
                     /locus_tag="BSU03280"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:212501"
     misc_feature    complement(353903..354589)
                     /gene="nasF"
                     /locus_tag="BSU03280"
                     /note="Uroporphyrinogen-III synthase [Coenzyme
                     metabolism]; Region: HemD; COG1587"
                     /db_xref="CDD:224503"
     misc_feature    complement(order(354092..354097,354125..354130,
                     354188..354190,354194..354196,354242..354244,
                     354323..354325,354410..354418))
                     /gene="nasF"
                     /locus_tag="BSU03280"
                     /note="active site"
                     /db_xref="CDD:119440"
     gene            complement(355412..355732)
                     /gene="nasE"
                     /locus_tag="BSU03290"
                     /db_xref="GeneID:938331"
     CDS             complement(355412..355732)
                     /gene="nasE"
                     /locus_tag="BSU03290"
                     /EC_number="1.7.1.4"
                     /function="16.10: Respire"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10217486, 15028686,
                     9765565; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory nitrite reductase [NAD(P)H] small
                     subunit"
                     /protein_id="NP_388211.1"
                     /db_xref="GI:16077398"
                     /db_xref="GeneID:938331"
                     /translation="MVNKDVTKVCIGKIEELPEQLGKTVYIEDKELAVFKLSDGSIRA
                     IENRCPHKGGVLAEGIVSGQYVFCPMHDWKISLEDGIVQEPDHGCVKTYETLIEGEHV
                     YLVY"
     misc_feature    complement(355421..355711)
                     /gene="nasE"
                     /locus_tag="BSU03290"
                     /note="Small subunit of nitrite reductase (NirD) family,
                     Rieske domain; composed of proteins similar to the
                     Bacillus subtilis small subunit of assimilatory nitrite
                     reductase containing a Rieske domain. The Rieske domain is
                     a [2Fe-2S] cluster binding domain...; Region:
                     Rieske_NirD_small_Bacillus; cd03530"
                     /db_xref="CDD:239606"
     misc_feature    complement(order(355514..355516,355520..355522,
                     355529..355531,355577..355582,355586..355588))
                     /gene="nasE"
                     /locus_tag="BSU03290"
                     /note="[2Fe-2S] cluster binding site [ion binding]; other
                     site"
                     /db_xref="CDD:239606"
     gene            complement(355764..358181)
                     /gene="nasD"
                     /locus_tag="BSU03300"
                     /db_xref="GeneID:938329"
     CDS             complement(355764..358181)
                     /gene="nasD"
                     /locus_tag="BSU03300"
                     /EC_number="1.7.1.4"
                     /function="16.10: Respire"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10972836, 15028686,
                     9765565; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase"
                     /protein_id="NP_388212.1"
                     /db_xref="GI:16077399"
                     /db_xref="GeneID:938329"
                     /translation="MGKKQLVLVGNGMAGVRAIEEILSVAKDEFQITIFGAEPHPNYN
                     RILLSKVLQGDTDIKDITLNDWDWYEENNIQLYTNETVIKVDTENKTVITDADRIQPY
                     DELILATGSVPFILPIPGADKKGVTAFRDIKDTDTMLAASKQYKKAAVIGGGLLGLEA
                     ARGLLNLGMDVSVIHLAPFLMERQLDATAGRLLQNELEKQGMTFLLEKQTEEIVGDDR
                     VEGLRFKDGTSIEADLVVMAVGIRPNTTLGAESGIPVNRGIIVNDYMQTEIPHIYAVG
                     ECAEHRGIAYGLVAPLYEQAKVLAKHMCGIETKPYEGSVLSTQLKVSGVEVFSAGDFN
                     ESEEKKAIKVFDEQDGIYKKIVLRGNQIVGAVLFGDSSEGNRLFSMIQKEADISETSK
                     ISILQPLSQEAGTSITAAMSDDEIICGCNGVSKGAIIQAIQEKGCSSTDEIKACTGAS
                     RSCGGCKPLVEEILQHTLGSDFDASAQKEAICGCTTLSRDEVVEEIKAKGLSHTREVM
                     NVLGWKTPEGCSKCRPALNYYLGMINPTKYEDDRTSRFVNERMHANIQKDGTYSVVPR
                     MYGGVTNSTDLRKIADVVDKYEIPLVKMTGGQRIDLIGVKKEDLPKVWEDLDMPSGYA
                     YGKTLRTVKTCVGEQFCRFGTQDSMALGIALEKKFEGLNTPHKVKMAVSACPRNCAES
                     GIKDLGVVGIDGGWELYVGGNGGTHLRAGDLLMKVKTNEEVLEYAGAYLQYYRETANY
                     LERTSAWLERVGLSHVQSVLNDPEKRQELNGRMNETLSVHKDPWKDFLEDKQTSKELF
                     ENVVTTS"
     misc_feature    complement(355809..358166)
                     /gene="nasD"
                     /locus_tag="BSU03300"
                     /note="nitrite reductase [NAD(P)H], large subunit; Region:
                     nitri_red_nirB; TIGR02374"
                     /db_xref="CDD:162827"
     misc_feature    complement(357657..>357965)
                     /gene="nasD"
                     /locus_tag="BSU03300"
                     /note="NAD(P)-binding Rossmann-like domain; Region:
                     NAD_binding_8; cl19134"
                     /db_xref="CDD:267487"
     misc_feature    complement(357501..357743)
                     /gene="nasD"
                     /locus_tag="BSU03300"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     Region: Pyr_redox; pfam00070"
                     /db_xref="CDD:249559"
     misc_feature    complement(356778..356939)
                     /gene="nasD"
                     /locus_tag="BSU03300"
                     /note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD;
                     pfam04324"
                     /db_xref="CDD:252526"
     misc_feature    complement(356592..356741)
                     /gene="nasD"
                     /locus_tag="BSU03300"
                     /note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD;
                     pfam04324"
                     /db_xref="CDD:252526"
     misc_feature    complement(356334..356516)
                     /gene="nasD"
                     /locus_tag="BSU03300"
                     /note="Nitrite/Sulfite reductase ferredoxin-like half
                     domain; Region: NIR_SIR_ferr; pfam03460"
                     /db_xref="CDD:251971"
     misc_feature    complement(355881..356309)
                     /gene="nasD"
                     /locus_tag="BSU03300"
                     /note="Nitrite and sulphite reductase 4Fe-4S domain;
                     Region: NIR_SIR; pfam01077"
                     /db_xref="CDD:250346"
     gene            complement(358303..360435)
                     /gene="nasC"
                     /locus_tag="BSU03310"
                     /db_xref="GeneID:938321"
     CDS             complement(358303..360435)
                     /gene="nasC"
                     /locus_tag="BSU03310"
                     /EC_number="1.7.99.4"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10972836, 15028686,
                     9765565; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory nitrate reductase catalytic
                     subunit"
                     /protein_id="NP_388213.2"
                     /db_xref="GI:255767097"
                     /db_xref="GeneID:938321"
                     /translation="MTERLLRYFRDKQQDVQSEKTYDTQCPFCSMQCKMQLVEQTIVT
                     RKKYTAIGIDNPTTQGRLCIKGMNAHQHALNSSRITRPLLKKNGEFMPVSWEEALNHI
                     KDQVTMIQTEHGHDAMAVYGSASITNEEAYLLGKFARVGLQTKYIDYNGRLCMSAAAT
                     AANQTFGADRGLTNPLSDIPHTRVIILAGTNIAECQPTIMPYFEKAKENGAYFIAIDP
                     RETATTKIADLHLKIKPGTDAALANGLVKIIIDEQLINEDFIQSRTNGFEELKQHTDS
                     LDLNDIAEQTSVSLVDIRKAAVKFAKETSGMLFTARGIEQQTDGTAAVKGFLNMVLIT
                     GKIGKPYSGYGAITGQGNGQGAREHGQKADQLPGYRSIENEEHRAHIAKVWGIHQDEL
                     PRKGVSAYEMMEKINDGDIKGLFLMCSNPAVSSPNANLVKKALRRLTFFVAIDLFISE
                     TAKYADVILPASSYLEDEGTMTNVEGRVTLREASRPCPGEAKHDWQIICDLASALGKG
                     RYFSYTSAEDIFNELREASRGGIADYSGISYGRLRREGGIHWPCPESDHPGTGRLFTE
                     SFAHPDQKAALSVIPNEPPVPKEKPTADYPLYLTTGRVMSHYLTGVQTRKSAALAARH
                     FESFMEIHPQTAATYNIEDRVLVKIESPRGSITVRSKLSEQIRKDTVFVPIHWADAQN
                     VNDLIGEALDPACKMPGFKVCAVRIIPI"
     misc_feature    complement(358681..360369)
                     /gene="nasC"
                     /locus_tag="BSU03310"
                     /note="Nitrate reductases, NapA (Nitrate-R-NapA), NasA,
                     and NarB catalyze the reduction of nitrate to nitrite.
                     Monomeric Nas is located in the cytoplasm and participates
                     in nitrogen assimilation. Dimeric Nap is located in the
                     periplasm and is coupled to quinol...; Region:
                     MopB_Nitrate-R-NapA-like; cd02754"
                     /db_xref="CDD:239155"
     misc_feature    complement(358315..360366)
                     /gene="nasC"
                     /locus_tag="BSU03310"
                     /note="formate dehydrogenase, alpha subunit,
                     archaeal-type; Region: Fdh-alpha; TIGR01591"
                     /db_xref="CDD:130652"
     misc_feature    complement(order(359842..359844,360247..360249,
                     360337..360339,360349..360354,360358..360360))
                     /gene="nasC"
                     /locus_tag="BSU03310"
                     /note="[4Fe-4S] binding site [ion binding]; other site"
                     /db_xref="CDD:239155"
     misc_feature    complement(order(358954..358956,359035..359037,
                     359047..359055,359095..359106,359164..359166,
                     359176..359181,359386..359391,359488..359490,
                     359497..359505,359722..359724,359728..359730,
                     359779..359787,359851..359856,359863..359874,
                     359974..359976,359986..359988,360061..360063,
                     360241..360243))
                     /gene="nasC"
                     /locus_tag="BSU03310"
                     /note="molybdopterin cofactor binding site; other site"
                     /db_xref="CDD:239155"
     misc_feature    complement(358309..358659)
                     /gene="nasC"
                     /locus_tag="BSU03310"
                     /note="This CD includes formate dehydrogenases (Fdh) H and
                     N; nitrate reductases, Nap and Nas; and other related
                     proteins. Formate dehydrogenase H is a component of the
                     anaerobic formate hydrogen lyase complex  and catalyzes
                     the reversible oxidation of formate...; Region:
                     MopB_CT_Fdh-Nap-like; cd00508"
                     /db_xref="CDD:238282"
     misc_feature    complement(order(358333..358338,358384..358386,
                     358411..358413,358606..358617,358621..358635))
                     /gene="nasC"
                     /locus_tag="BSU03310"
                     /note="molybdopterin cofactor binding site; other site"
                     /db_xref="CDD:238282"
     gene            complement(360442..362757)
                     /gene="nasB"
                     /locus_tag="BSU03320"
                     /db_xref="GeneID:938328"
     CDS             complement(360442..362757)
                     /gene="nasB"
                     /locus_tag="BSU03320"
                     /function="16.2: Construct biomass (Anabolism)"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10940050, 10972836,
                     15028686, 7836289, 9765565; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory nitrate reductase electron transfer
                     subunit"
                     /protein_id="NP_388214.2"
                     /db_xref="GI:255767098"
                     /db_xref="GeneID:938328"
                     /translation="MKKQRLVLAGNGMAGIRCIEEVLKLNRHMFEIVIFGSEPHPNYN
                     RILLSSVLQGEASLDDITLNSKDWYDKHGITLYTGETVIQIDTDQQQVITDRKRTLSY
                     DKLIVATGSSPHILPIPGADKKGVYGFRTIEDCQALMNMAQHFQKAAVIGAGLLGLEA
                     AVGLQHLGMDVSVIHHSAGIMQKQLDQTAARLLQTELEQKGLTFLLEKDTVSISGATK
                     ADRIHFKDGSSLKADLIVMAAGVKPNIELAVSAGIKVNRGIIVNDFMQTSEPNIYAVG
                     ECAEHNGTVYGLVAPLYEQGKALASHICGVPCEEYQGSAPSAALKIAGIDVWSAGKIQ
                     EDERTTSIKIYDEQAGVYKKALFVDDKLAGVILFGDTRDKQRLLDSLLKQRDISIAKK
                     QIIEPETSGPLFESMPSSETICQCNTVTKGAIEDAVHTNSLTTVEEVKHCTKATGSCG
                     GCKPLVEDLLRYMTNSEYTKPASTPSFCSCTDFTEDDIIAELQRRPFTNPAEVMNQLD
                     WKTKNGCSTCVPAIQYYLEMLYPGFVQPEPATEETCILIPQMYGGRTNAEQLRTIANI
                     IEAYSIPDVSITHGQRLKLSGIKPADLPNMKKDLKMPVYTNEHRHALQSIKACTCGQN
                     RSIQQLAAQIERQLEMLPLPAPISISLSCETDCTEAALQDVGAIRTQAGWDIHIGGVR
                     GTHARSGALFCVTENEDSTAGMIKGLIQYYRETAHYLEGVHQWIDRLGIVHIREVLFE
                     EDLRAQLLESLQTDLSLIQNPTVETGAYKKG"
     misc_feature    complement(360451..362742)
                     /gene="nasB"
                     /locus_tag="BSU03320"
                     /note="nitrite reductase [NAD(P)H], large subunit; Region:
                     nitri_red_nirB; TIGR02374"
                     /db_xref="CDD:162827"
     misc_feature    complement(362227..>362592)
                     /gene="nasB"
                     /locus_tag="BSU03320"
                     /note="NAD(P)-binding Rossmann-like domain; Region:
                     NAD_binding_8; cl19134"
                     /db_xref="CDD:267487"
     misc_feature    complement(362077..362319)
                     /gene="nasB"
                     /locus_tag="BSU03320"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     Region: Pyr_redox; pfam00070"
                     /db_xref="CDD:249559"
     misc_feature    complement(361375..361527)
                     /gene="nasB"
                     /locus_tag="BSU03320"
                     /note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD;
                     pfam04324"
                     /db_xref="CDD:252526"
     misc_feature    complement(361177..361326)
                     /gene="nasB"
                     /locus_tag="BSU03320"
                     /note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD;
                     pfam04324"
                     /db_xref="CDD:252526"
     misc_feature    complement(360961..>361104)
                     /gene="nasB"
                     /locus_tag="BSU03320"
                     /note="Nitrite/Sulfite reductase ferredoxin-like half
                     domain; Region: NIR_SIR_ferr; pfam03460"
                     /db_xref="CDD:251971"
     misc_feature    complement(360517..360876)
                     /gene="nasB"
                     /locus_tag="BSU03320"
                     /note="Nitrite and sulphite reductase 4Fe-4S domain;
                     Region: NIR_SIR; pfam01077"
                     /db_xref="CDD:250346"
     gene            362937..364142
                     /gene="nasA"
                     /locus_tag="BSU03330"
                     /db_xref="GeneID:938326"
     CDS             362937..364142
                     /gene="nasA"
                     /locus_tag="BSU03330"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15849754, 16850406,
                     7868621; Product type t: transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate transporter"
                     /protein_id="NP_388215.2"
                     /db_xref="GI:255767099"
                     /db_xref="GeneID:938326"
                     /translation="MKLSELKTSGHPLTLLCSFLYFDVSFMIWVMLGALGVYISQDFG
                     LSPFEKGLVVAVPILSGSVFRIILGILTDRIGPKKTAVIGMLVTMIPLLWGTFGGRSL
                     TELYAIGILLGVAGASFAVALPMASRWYPPHLQGLAMGIAGAGNSGTLFATLFGPRLA
                     EQFGWHIVMGIALIPLLIVFILFVSMAKDSPAQPSPQPLKSYLHVFGQKETWFFCLLY
                     SVTFGGFVGLSSFLSIFFVDQYQLSKIHAGDFVTLCVAAGSFFRPVGGLISDRVGGTK
                     VLSVLFVIVALCMAGVSSLPSLSMVIVLLFVGMMGLGMGNGAVFQLVPQRFRKEIGMV
                     TGIVGAAGGIGGFFLPNILGSLKQMTGTYAIGFITFSCIALLAFALVLAAGYYWRKSW
                     SAESSPADV"
     misc_feature    362937..364049
                     /gene="nasA"
                     /locus_tag="BSU03330"
                     /note="Nitrate/nitrite transporter [Inorganic ion
                     transport and metabolism]; Region: NarK; COG2223"
                     /db_xref="CDD:225133"
     misc_feature    363006..363929
                     /gene="nasA"
                     /locus_tag="BSU03330"
                     /note="The Major Facilitator Superfamily (MFS) is a large
                     and diverse group of secondary transporters that includes
                     uniporters, symporters, and antiporters. MFS proteins
                     facilitate the transport across cytoplasmic or internal
                     membranes of a variety of...; Region: MFS; cd06174"
                     /db_xref="CDD:119392"
     misc_feature    order(363021..363023,363030..363038,363042..363047,
                     363096..363098,363105..363110,363117..363119,
                     363129..363134,363138..363143,363282..363287,
                     363294..363299,363306..363308,363315..363317,
                     363351..363356,363363..363368,363381..363383,
                     363600..363602,363609..363614,363621..363626,
                     363633..363635,363675..363677,363687..363689,
                     363699..363701,363708..363710,363720..363722,
                     363861..363863,363870..363875,363882..363884,
                     363894..363899,363906..363908)
                     /gene="nasA"
                     /locus_tag="BSU03330"
                     /note="putative substrate translocation pore; other site"
                     /db_xref="CDD:119392"
     gene            364259..365173
                     /gene="yciA"
                     /locus_tag="BSU03340"
                     /db_xref="GeneID:938325"
     CDS             364259..365173
                     /gene="yciA"
                     /locus_tag="BSU03340"
                     /function="16.2: Construct biomass (Anabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="similar protein in Methanocaldococcus converts GTP
                     to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the
                     first step in methanopterin biosynthesis"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase folE2"
                     /protein_id="NP_388216.2"
                     /db_xref="GI:255767100"
                     /db_xref="GeneID:938325"
                     /translation="MNQHTLLPKKTERLQYFGSVSPIKGEKPVEKEKMKDLQNIRKDY
                     FFDIQHVGVANVSHPVTITSAMMPAEQTTAANFTMTCNLPRNQKGINMSRLTELLQVY
                     HQNGWILSFSSLQQFTKELAENMDTSSATVEVRFPWFFERKSPKLEKAGLMHADIFMS
                     VTYRKDQPFKQRAGISAKVTTLCPCSKEISEYSAHNQRGTVSIWADIHPAASLPSDVK
                     ADLLHAAESNASARLHPVLKRPDEKAVTETAYENPRFVEDLARLIAADLFELEWVSAF
                     EIECRNEESIHLHDAYAKLCFSKEVDKI"
     misc_feature    364262..365170
                     /gene="yciA"
                     /locus_tag="BSU03340"
                     /note="Type I GTP cyclohydrolase folE2; Region: GCHY-1;
                     cl00642"
                     /db_xref="CDD:260549"
     gene            365170..365754
                     /gene="yciB"
                     /locus_tag="BSU03350"
                     /db_xref="GeneID:938318"
     CDS             365170..365754
                     /gene="yciB"
                     /locus_tag="BSU03350"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 12426338; Product type pt :
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase YciB"
                     /protein_id="NP_388217.2"
                     /db_xref="GI:255767101"
                     /db_xref="GeneID:938318"
                     /translation="MKLSLFIIAVLMPVILLSACSDHAEEHASINTKKTVENITDVRK
                     TAKTSIDWTKPSGGEYPDIKQKHVWIDVNVKEQKAYIKEGSNTIYTMMISSGLDQTKD
                     DATPKGTFYVEPERGEWFFSEGYQEGAEYWVSWKNHGEFLFHSVPMTKDQKVIKTEAE
                     KLGTKASHGCIRLTIPDAKWVYENIPEHTKVVIS"
     misc_feature    365170..365751
                     /gene="yciB"
                     /locus_tag="BSU03350"
                     /note="Uncharacterized protein conserved in bacteria
                     [Function unknown]; Region: ErfK; COG1376"
                     /db_xref="CDD:224294"
     misc_feature    365371..365748
                     /gene="yciB"
                     /locus_tag="BSU03350"
                     /note="L,D-transpeptidase catalytic domain; Region: YkuD;
                     pfam03734"
                     /db_xref="CDD:252135"
     gene            365850..366035
                     /gene="yczL"
                     /locus_tag="BSU03359"
                     /db_xref="GeneID:8303053"
     CDS             365850..366035
                     /gene="yczL"
                     /locus_tag="BSU03359"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 5: No homology to any previously reported
                     sequences"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003097674.1"
                     /db_xref="GI:255767102"
                     /db_xref="GeneID:8303053"
                     /translation="MKSGKASIKDLAVGKGKDLRWGKGLNAVGVFTDLEIGRQREMSA
                     KSCSTPLYIRRSIQFKS"
     gene            366063..367256
                     /gene="yciC"
                     /locus_tag="BSU03360"
                     /db_xref="GeneID:938322"
     CDS             366063..367256
                     /gene="yciC"
                     /locus_tag="BSU03360"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 12426338, 18344368, 2013568, 9811636;
                     Product type pt:  transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="metal chaperone YciC"
                     /protein_id="NP_388218.1"
                     /db_xref="GI:16077405"
                     /db_xref="GeneID:938322"
                     /translation="MKKIPVTVLSGYLGAGKTTLLNSILQNREGLKIAVIVNDMSEVN
                     IDAGLVKQEGGLSRTDEKLVEMSNGCICCTLREDLLIEVEKLAKDGRFDYIVIESTGI
                     SEPIPVAQTFSYIDEEMGIDLTKFCQLDTMVTVVDANRFWHDYQSGESLLDRKEALGE
                     KDEREIADLLIDQIEFCDVLILNKCDLVSEQELEQLENVLRKLQPRARFIRSVKGNVK
                     PQEILHTGLFNFEEASGSAGWIQELTAGHAEHTPETEEYGISSFVYKRRLPFHSTRFY
                     RWLDQMPKNVVRAKGIVWCASHNNLALLMSQAGPSVTIEPVSYWVAALPKLEQEQVKQ
                     QEPEILEEWDPEFGDRLTQLVFIGTDLDEETITKELDQCLLTEYEFDSDWSLFEDPFK
                     WKLNQ"
     misc_feature    366072..367190
                     /gene="yciC"
                     /locus_tag="BSU03360"
                     /note="Putative GTPases (G3E family) [General function
                     prediction only]; Region: COG0523"
                     /db_xref="CDD:223597"
     misc_feature    366075..366695
                     /gene="yciC"
                     /locus_tag="BSU03360"
                     /note="CobW/HypB/UreG, nucleotide-binding domain; Region:
                     cobW; pfam02492"
                     /db_xref="CDD:251330"
     misc_feature    366837..367184
                     /gene="yciC"
                     /locus_tag="BSU03360"
                     /note="Cobalamin synthesis protein cobW C-terminal domain;
                     Region: CobW_C; smart00833"
                     /db_xref="CDD:214844"
     gene            complement(367305..367985)
                     /gene="yckA"
                     /locus_tag="BSU03370"
                     /db_xref="GeneID:938323"
     CDS             complement(367305..367985)
                     /gene="yckA"
                     /locus_tag="BSU03370"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pt:
                     transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease protein
                     YckA"
                     /protein_id="NP_388219.1"
                     /db_xref="GI:16077406"
                     /db_xref="GeneID:938323"
                     /translation="MINSIQWEYIFNTKLAIESFPYVIKGIGYTLLISFVSMFAGTVI
                     GLFISLARMSKLALLRWPAKLYISFMRGVPILVILFILYFGFPYIGIEFSAVTAALIG
                     FSLNSAAYIAEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSIRIALPPLANV
                     LLDLIKASSLAAMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSIAAVFQNIL
                     EKKYAHYV"
     misc_feature    complement(367311..367934)
                     /gene="yckA"
                     /locus_tag="BSU03370"
                     /note="ABC-type amino acid transport system, permease
                     component [Amino acid transport and metabolism]; Region:
                     HisM; COG0765"
                     /db_xref="CDD:223836"
     misc_feature    complement(367347..367907)
                     /gene="yckA"
                     /locus_tag="BSU03370"
                     /note="Transmembrane subunit (TM) found in Periplasmic
                     Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which generally bind type 2 PBPs. These types
                     of transporters consist of a PBP, two TMs, and two
                     cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
                     cd06261"
                     /db_xref="CDD:119394"
     misc_feature    complement(order(367347..367352,367359..367364,
                     367371..367376,367380..367385,367392..367397,
                     367425..367430,367467..367472,367479..367490,
                     367509..367511,367518..367523,367563..367565,
                     367614..367616,367623..367628,367638..367640,
                     367644..367649,367656..367658,367662..367664,
                     367668..367673,367737..367739,367743..367748,
                     367755..367784,367788..367799,367827..367829,
                     367842..367847,367854..367859))
                     /gene="yckA"
                     /locus_tag="BSU03370"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:119394"
     misc_feature    complement(order(367473..367490,367737..367781))
                     /gene="yckA"
                     /locus_tag="BSU03370"
                     /note="conserved gate region; other site"
                     /db_xref="CDD:119394"
     misc_feature    complement(order(367395..367397,367425..367427,
                     367434..367436,367470..367472,367686..367688,
                     367737..367739))
                     /gene="yckA"
                     /locus_tag="BSU03370"
                     /note="putative PBP binding loops; other site"
                     /db_xref="CDD:119394"
     misc_feature    complement(order(367542..367544,367554..367559,
                     367575..367613))
                     /gene="yckA"
                     /locus_tag="BSU03370"
                     /note="ABC-ATPase subunit interface; other site"
                     /db_xref="CDD:119394"
     gene            complement(367995..368858)
                     /gene="yckB"
                     /locus_tag="BSU03380"
                     /db_xref="GeneID:938320"
     CDS             complement(367995..368858)
                     /gene="yckB"
                     /locus_tag="BSU03380"
                     /function="16.1: Circulate"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pt:  transporter"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter extracellular-binding protein
                     YckB"
                     /protein_id="NP_388220.1"
                     /db_xref="GI:16077407"
                     /db_xref="GeneID:938320"
                     /translation="MKSFMHSKAVIFSFTMAFFLILAACSGKNEADSKDTGWEQIKDK
                     GKIVVATSGTLYPTSYHDTDSGSDKLTGYEVEVVREAAKRLGLKVEFKEMGIDGMLTA
                     VNSGQVDAAANDIDVTKDREEKFAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAA
                     GAATTVYMEVARKYGAKEVIYDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPDL
                     NITIHPDIKYMPNKQALVMKKSNAALQKKMNEALKEMSKDGSLTKLSKQFFNKADVSK
                     KIDADVQDVDL"
     misc_feature    complement(368052..368723)
                     /gene="yckB"
                     /locus_tag="BSU03380"
                     /note="Bacterial periplasmic substrate-binding proteins;
                     Region: PBPb; smart00062"
                     /db_xref="CDD:214497"
     misc_feature    complement(368052..368720)
                     /gene="yckB"
                     /locus_tag="BSU03380"
                     /note="Bacterial periplasmic transport systems use
                     membrane-bound complexes and substrate-bound,
                     membrane-associated, periplasmic binding proteins (PBPs)
                     to transport a wide variety of  substrates, such as, amino
                     acids, peptides, sugars, vitamins and inorganic...;
                     Region: PBPb; cd00134"
                     /db_xref="CDD:238078"
     misc_feature    complement(order(368247..368249,368361..368363,
                     368496..368498,368571..368573,368694..368696))
                     /gene="yckB"
                     /locus_tag="BSU03380"
                     /note="substrate binding pocket [chemical binding]; other
                     site"
                     /db_xref="CDD:238078"
     misc_feature    complement(order(368268..368270,368286..368288,
                     368298..368300))
                     /gene="yckB"
                     /locus_tag="BSU03380"
                     /note="membrane-bound complex binding site; other site"
                     /db_xref="CDD:238078"
     misc_feature    complement(368157..368174)
                     /gene="yckB"
                     /locus_tag="BSU03380"
                     /note="hinge residues; other site"
                     /db_xref="CDD:238078"
     gene            369236..369691
                     /gene="yckC"
                     /locus_tag="BSU03390"
                     /db_xref="GeneID:938315"
     CDS             369236..369691
                     /gene="yckC"
                     /locus_tag="BSU03390"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; PubMedId: 15849754, 16850406; Product type pm:
                     membrane component"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388221.1"
                     /db_xref="GI:16077408"
                     /db_xref="GeneID:938315"
                     /translation="MNIYKPAGFWIRLGAALLDYIIVSVPLLLIYWLITGKDPNDSMF
                     ISLVVLLYSILLPMFWRGYLIGKRICGIRIVKKDGSQVSLLTMFLRVIVAGLVYCITF
                     GLGLIASLILIAVREDKRTLHDLIAGTYVTYATPGEEELNADEEIRKSE"
     misc_feature    369251..369619
                     /gene="yckC"
                     /locus_tag="BSU03390"
                     /note="RDD family; Region: RDD; pfam06271"
                     /db_xref="CDD:253650"
     gene            369773..370105
                     /gene="yckD"
                     /locus_tag="BSU03400"
                     /db_xref="GeneID:938319"
     CDS             369773..370105
                     /gene="yckD"
                     /locus_tag="BSU03400"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3: Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf:  factor"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_388222.1"
                     /db_xref="GI:16077409"
                     /db_xref="GeneID:938319"
                     /translation="MKRITINIITMFIAAAVISLTGTAEAAEKQQQSPANVTLTDQQK
                     KEIEQLEAEILKKRKDVISKYVQYGILPKERGEHIKNHLDKHFEMMKQNGFVPKHHPH
                     PHKFEKRH"
     misc_feature    369887..370063
                     /gene="yckD"
                     /locus_tag="BSU03400"
                     /note="Protein of unknown function (DUF2680); Region:
                     DUF2680; pfam10925"
                     /db_xref="CDD:151372"
     gene            370259..371692
                     /gene="bglC"
                     /locus_tag="BSU03410"
                     /db_xref="GeneID:938317"
     CDS             370259..371692
                     /gene="bglC"
                     /locus_tag="BSU03410"
                     /EC_number="3.2.1.21"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 14652714, 18069788;
                     Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-phospho-beta-d-glucosidase BglC"
                     /protein_id="NP_388223.1"
                     /db_xref="GI:16077410"
                     /db_xref="GeneID:938317"
                     /translation="MIHQHPESFPKHFLWGSASAAYQIEGAWNEDGKGPSVWDVFTKI
                     PGKTFKGTNGEIAVDHYHRFKEDVALMAEMGLKAYRFSVSWPRVFPKGKGEINEAGLA
                     FYDSLIDELLSHHIEPVLTLYHWDLPQALMDEYGGFESRNIIEDFNHYCITLYKRFGD
                     RVKYWVTLNEQNYNFNHGFITAMHPPGVKDRKRFYEANHIAFLANAKAIESFREYVPE
                     GKIGPSFAYSPAYPLSSHPEDILAFENAEEFTNNWWLDMYCWGTYPQIPFRCLEKQGW
                     APTIEAGDMDLLAKGKPDFVGVNYYQTITYERNPLDGVSEGKMNTTGQKGTNQETGIP
                     GVFKTKKNPHLTTSNWDWTIDPIGLRIGLRRITSRYQLPVFITENGLGEFDKVEDGTV
                     QDDYRIDYLRSHLEQCRQAISDGVDLIGYCSWSFTDLLSWLNGYQKRYGFVYVNRDEE
                     STSDLKRLKKKSFYWYQDVIKTNGESL"
     misc_feature    370271..371683
                     /gene="bglC"
                     /locus_tag="BSU03410"
                     /note="Glycosyl hydrolase family 1; Region: Glyco_hydro_1;
                     pfam00232"
                     /db_xref="CDD:249702"
     misc_feature    370283..371686
                     /gene="bglC"
                     /locus_tag="BSU03410"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     Region: BglB; COG2723"
                     /db_xref="CDD:225343"
     gene            complement(371729..372127)
                     /gene="nin"
                     /locus_tag="BSU03420"
                     /db_xref="GeneID:938312"
     CDS             complement(371729..372127)
                     /gene="nin"
                     /locus_tag="BSU03420"
                     /function="16.3: Control"
                     /function="16.11: Scavenge (Catabolism)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11359569, 11814663;
                     Product type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-entry nuclease inhibitor"
                     /protein_id="NP_388224.1"
                     /db_xref="GI:16077411"
                     /db_xref="GeneID:938312"
                     /translation="MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAAD
                     GAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPFHVTENGIHIESIMSKRLSFDLP
                     KGDYQLTCWTVPAEMSDLHADTYIIDAVSV"
     misc_feature    complement(371732..372103)
                     /gene="nin"
                     /locus_tag="BSU03420"
                     /note="Competence protein J (ComJ); Region: ComJ;
                     pfam11033"
                     /db_xref="CDD:151480"
     gene            complement(372154..372597)
                     /gene="nucA"
                     /locus_tag="BSU03430"
                     /db_xref="GeneID:938309"
     CDS             complement(372154..372597)
                     /gene="nucA"
                     /locus_tag="BSU03430"
                     /function="16.6: Maintain"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 11359569, 11814663,
                     2841296, 7746143; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-entry nuclease"
                     /protein_id="NP_388225.2"
                     /db_xref="GI:50812179"
                     /db_xref="GeneID:938309"
                     /translation="MTTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDET
                     MAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGAEERREQSLKDVPSKKGYDRDEWPM
                     AMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ"
     misc_feature    complement(372160..372465)
                     /gene="nucA"
                     /locus_tag="BSU03430"
                     /note="Deoxyribonuclease NucA/NucB; Region:
                     DNase_NucA_NucB; pfam14040"
                     /db_xref="CDD:258274"
     gene            complement(372771..374492)
                     /gene="tlpC"
                     /locus_tag="BSU03440"
                     /db_xref="GeneID:938316"
     CDS             complement(372771..374492)
                     /gene="tlpC"
                     /locus_tag="BSU03440"
                     /function="16.3: Control"
                     /function="16.12: Sense"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 2a: Function of homologous gene
                     experimentally demonstrated in an other organism;
                     PubMedId: 15187186, 7704255, 7921238; Product type rc :
                     receptor"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein TlpC"
                     /protein_id="NP_388226.2"
                     /db_xref="GI:255767103"
                     /db_xref="GeneID:938316"
                     /translation="MLIKRFKMKLGTKILCLVFVVILLFSASVGTVMLKEITESMKQM
                     ATEKAKGDLALSSTYIDDVMSGDWQVKNNKLYKGQTQINGNEDIVDLLGEKTGDTITI
                     FQGDTRVATNVMKNGERAVGTQASSEVIAAVLKKGKRFYGQADVAGSSYQTAYMPLKD
                     QNGNIIGMLYTGANQSILASLTQSLFTQFAIVLVIVIMVSVILVLVFTRKINKRLNAL
                     KSAFESAGNGDMTIEVSDKTGDELSELSVYYNKMRMKLNDTIQTVQQSALQLASASQQ
                     LSAGAEETNQASEKITEAVQQIANGAQDQITRIENSESSLKQASADIRDISANTAAIA
                     DKGQLAQSKADIGQKEIANVQAQMDAIHQSIQKSGEIIHQLDGRSKQIEQILSVITQI
                     ADQTNLLALNAAIEAARAGEQGKGFAVVADEVRKLAEESQQSAGQISKLIIEIQKDMN
                     RSARSVEHVKTEAAEGVTMIQRTRDAFKEIAAATGEISAEISDLSASVTNISASAHQI
                     NDSFAANTADIKESTKNTRQAAALTEEQFAAMEEITAASETLSQLAEELTGIISQFKM
                     INQAENG"
     misc_feature    complement(373821..>374123)
                     /gene="tlpC"
                     /locus_tag="BSU03440"
                     /note="Domain of unknown function (DUF4042); Region:
                     DUF4042; pfam13251"
                     /db_xref="CDD:205431"
     misc_feature    complement(373719..373862)
                     /gene="tlpC"
                     /locus_tag="BSU03440"
                     /note="Histidine kinase, Adenylyl cyclase,
                     Methyl-accepting protein, and Phosphatase (HAMP) domain.
                     HAMP is a signaling domain which occurs in a wide variety
                     of signaling proteins, many of which are bacterial. The
                     HAMP domain consists of two alpha helices...; Region:
                     HAMP; cd06225"
                     /db_xref="CDD:100122"
     misc_feature    complement(order(373725..373730,373737..373742,
                     373746..373751,373758..373763,373767..373772,
                     373818..373820,373824..373829,373836..373841,
                     373845..373850,373857..373862))
                     /gene="tlpC"
                     /locus_tag="BSU03440"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:100122"
     misc_feature    complement(372945..373541)
                     /gene="tlpC"
                     /locus_tag="BSU03440"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; Region: MCP_signal; cd11386"
                     /db_xref="CDD:206779"
     misc_feature    complement(order(372948..372953,372960..372962,
                     372969..372974,372981..372983,372990..372995,
                     372999..373004,373011..373016,373020..373025,
                     373032..373034,373041..373046,373053..373055,
                     373062..373067,373074..373079,373083..373088,
                     373095..373097,373104..373109,373116..373118,
                     373125..373130,373167..373172,373179..373184,
                     373188..373193,373200..373205,373212..373214,
                     373221..373226,373233..373235,373242..373244,
                     373254..373256,373275..373277,373284..373286,
                     373296..373298,373305..373310,373317..373319,
                     373326..373328,373335..373340,373347..373352,
                     373359..373361,373368..373373,373377..373379,
                     373389..373394,373398..373403,373410..373412,
                     373419..373424,373431..373436,373443..373445,
                     373452..373457,373464..373466,373473..373478,
                     373482..373487,373494..373496,373503..373508,
                     373515..373520))
                     /gene="tlpC"
                     /locus_tag="BSU03440"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:206779"
     misc_feature    complement(372792..373502)
                     /gene="tlpC"
                     /locus_tag="BSU03440"
                     /note="Methyl-accepting chemotaxis protein (MCP)
                     signalling domain; Region: MCPsignal; pfam00015"
                     /db_xref="CDD:249510"
     misc_feature    complement(373209..373310)
                     /gene="tlpC"
                     /locus_tag="BSU03440"
                     /note="putative CheW interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:206779"
     gene            complement(374603..375160)
                     /gene="hxlB"
                     /locus_tag="BSU03450"
                     /db_xref="GeneID:938313"
     CDS             complement(374603..375160)
                     /gene="hxlB"
                     /locus_tag="BSU03450"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10572115, 15978081;
                     Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hexulose-6-phosphate isomerase"
                     /protein_id="NP_388227.1"
                     /db_xref="GI:16077414"
                     /db_xref="GeneID:938313"
                     /translation="MKTTEYVAEILNELHNSAAYISNEEADQLADHILSSHQIFTAGA
                     GRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAK
                     SLHGIVAALTINPESSIGKQADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFYD
                     AVILKLMEKKGLDSETMFTHHANLE"
     misc_feature    complement(374621..>375154)
                     /gene="hxlB"
                     /locus_tag="BSU03450"
                     /note="Transcriptional regulators [Transcription]; Region:
                     RpiR; COG1737"
                     /db_xref="CDD:224651"
     misc_feature    complement(374615..375151)
                     /gene="hxlB"
                     /locus_tag="BSU03450"
                     /note="Hexulose-6-phosphate isomerase (PHI). PHI is a
                     member of the SIS (Sugar ISomerase domain) superfamily. In
                     the ribulose monophosphate pathway of formaldehyde
                     fixation, hexulose-6-phosphate synthase catalyzes the
                     condensation of ribulose-5-phosphate with...; Region:
                     SIS_PHI; cd05005"
                     /db_xref="CDD:240138"
     misc_feature    complement(order(374618..374629,374666..374671,
                     374678..374683,374702..374704,374714..374716,
                     374861..374863,374870..374872,374882..374887,
                     374939..374950,374966..374968,374984..374986,
                     374990..374995,375002..375007,375014..375016,
                     375023..375025,375128..375130,375137..375145))
                     /gene="hxlB"
                     /locus_tag="BSU03450"
                     /note="tetramer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:240138"
     misc_feature    complement(order(374897..374905,375020..375022))
                     /gene="hxlB"
                     /locus_tag="BSU03450"
                     /note="active site"
                     /db_xref="CDD:240138"
     gene            complement(375166..375798)
                     /gene="hxlA"
                     /locus_tag="BSU03460"
                     /db_xref="GeneID:938314"
     CDS             complement(375166..375798)
                     /gene="hxlA"
                     /locus_tag="BSU03460"
                     /function="16.11: Scavenge (Catabolism)"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10572115, 15978081;
                     Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hexulose-6-phosphate synthase"
                     /protein_id="NP_388228.1"
                     /db_xref="GI:16077415"
                     /db_xref="GeneID:938314"
                     /translation="MELQLALDLVNIPEAIELVKEVEQYIDVVEIGTPVVINEGLRAV
                     KEIKEAFPQLKVLADLKIMDAGGYEIMKASEAGADIITVLGATDDATIKGAVEEAKKQ
                     KKKILVDMINVKDIESRAKEIDALGVDYICVHTGYDLQAEGKNSFEELTTIKNTVKNA
                     KTAIAGGIKLDTLPEVIQQKPDLVIVGGGITSAADKAETASKMKQLIVQG"
     misc_feature    complement(375190..375798)
                     /gene="hxlA"
                     /locus_tag="BSU03460"
                     /note="3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC)
                     and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC
                     catalyzes the formation of L-xylulose 5-phosphate and
                     carbon dioxide from 3-keto-L-gulonate 6-phosphate as part
                     of the anaerobic pathway for...; Region: KGPDC_HPS;
                     cd04726"
                     /db_xref="CDD:240077"
     misc_feature    complement(order(375235..375240,375298..375300,
                     375304..375306,375397..375399,375616..375618,
                     375622..375624,375709..375711,375775..375777,
                     375781..375783))
                     /gene="hxlA"
                     /locus_tag="BSU03460"
                     /note="active site"
                     /db_xref="CDD:240077"
     misc_feature    complement(order(375385..375393,375397..375399,
                     375445..375447,375463..375465,375526..375528,
                     375541..375543,375583..375585,375601..375609,
                     375676..375681,375688..375690,375769..375771))
                     /gene="hxlA"
                     /locus_tag="BSU03460"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:240077"
     misc_feature    complement(order(375622..375624,375709..375711))
                     /gene="hxlA"
                     /locus_tag="BSU03460"
                     /note="magnesium binding site [ion binding]; other site"
                     /db_xref="CDD:240077"
     gene            376032..376394
                     /gene="hxlR"
                     /locus_tag="BSU03470"
                     /db_xref="GeneID:938311"
     CDS             376032..376394
                     /gene="hxlR"
                     /locus_tag="BSU03470"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15978081; Product type r:
                     regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="HxlR family transcriptional regulator"
                     /protein_id="NP_388229.2"
                     /db_xref="GI:255767104"
                     /db_xref="GeneID:938311"
                     /translation="MSRMDDKRFNCEKELTLAVIGGKWKMLILWHLGKEGTKRFNELK
                     TLIPDITQKILVNQLRELEQDMIVHREVYPVVPPKVEYSLTPHGESLMPILEAMYEWG
                     KGYMELIDIDKNVMKESL"
     misc_feature    376086..376361
                     /gene="hxlR"
                     /locus_tag="BSU03470"
                     /note="HxlR-like helix-turn-helix; Region: HxlR;
                     pfam01638"
                     /db_xref="CDD:250762"
     gene            376968..387731
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /db_xref="GeneID:938306"
     CDS             376968..387731
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /function="16.8: Protect"
                     /function="16.5: Explore"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15066026, 16166527,
                     8288534, 8441623; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="surfactin synthase subunit 1"
                     /protein_id="NP_388230.2"
                     /db_xref="GI:255767105"
                     /db_xref="GeneID:938306"
                     /translation="MEITFYPLTDAQKRIWYTEKFYPHTSISNLAGIGKLVSADAIDY
                     VLVEQAIQEFIRRNDAMRLRLRLDENGEPVQYISEYRPVDIKHTDTTEDPNAIEFISQ
                     WSREETKKPLPLYDCDLFRFSLFTIKENEVWFYANVHHVISDGISMNILGNAIMHIYL
                     ELASGSETKEGISHSFIDHVLSEQEYAQSKRFEKDKAFWNKQFESVPELVSLKRNASA
                     GGSLDAERFSKDVPEALHQQILSFCEANKVSVLSVFQSLLAAYLYRVSGQNDVVTGTF
                     MGNRTNAKEKQMLGMFVSTVPLRTNIDGGQAFSEFVKDRMKDLMKTLRHQKYPYNLLI
                     NDLRETKSSLTKLFTVSLEYQVMQWQKEEDLAFLTEPIFSGSGLNDVSIHVKDRWDTG
                     KLTIDFDYRTDLFSREEINMICERMITMLENALTHPEHTIDELTLISDAEKEKLLARA
                     GGKSVSYRKDMTIPELFQEKAELLSDHPAVVFEDRTLSYRTLHEQSARIANVLKQKGV
                     GPDSPVAVLIERSERMITAIMGILKAGGAYVPIDPGFPAERIQYILEDCGADFILTES
                     KVAAPEADAELIDLDQAIEEGAEESLNADVNARNLAYIIYTSGTTGRPKGVMIEHRQV
                     HHLVESLQQTIYQSGSQTLRMALLAPFHFDASVKQIFASLLLGQTLYIVPKKTVTNGA
                     ALTAYYRKNSIEATDGTPAHLQMLAAAGDFEGLKLKHMLIGGEGLSSVVADKLLKLFK
                     EAGTAPRLTNVYGPTETCVDASVHPVIPENAVQSAYVPIGKALGNNRLYILDQKGRLQ
                     PEGVAGELYIAGDGVGRGYLHLPELTEEKFLQDPFVPGDRMYRTGDVVRWLPDGTIEY
                     LGREDDQVKVRGYRIELGEIEAVIQQAPDVAKAVVLARPDEQGNLEVCAYVVQKPGSE
                     FAPAGLREHAARQLPDYMVPAYFTEVTEIPLTPSGKVDRRKLFALEVKAVSGTAYTAP
                     RNETEKAIAAIWQDVLNVEKAGIFDNFFETGGHSLKAMTLLTKIHKETGIEIPLQFLF
                     EHPTITALAEEADHRESKAFAVIEPAEKQEHYPLSLAQQRTYIVSQFEDAGVGYNMPA
                     AAILEGPLDIQKLERAFQGLIRRHESLRTSFVLENSTPRQKIHDSVDFNIEMIERGGR
                     SDEAIMASFVRTFDLAKAPLFRIGLLGLEENRHMLLFDMHHLISDGVSIGIMLEELAR
                     IYKGEQLPDLRLQYKDYAVWQSRQAAEGYKKDQAYWKEVFAGELPVLQLLSDYPRPPV
                     QSFEGDRVSIKLDAGVKDRLNRLAEQNGATLYMVMLSAYYTLLSKYTGQDDIIVGTPS
                     AGRNHSDTEGIIGMFVNTLAIRSEVKQNETFTQLISRVRKRVLDAFSHQDYPFEWLVE
                     DLNIPRDVSRHPLFDTMFSLQNATEGIPAVGDLSLSVQETNFKIAKFDLTVQARETDE
                     GIEIDVDYSTKLFKQSTADRLLTHFARLLEDAAADPEKPISEYKLLSEEEAASQIQQF
                     NPGRTPYPKDKTIVQLFEEQAANTPDHTALQYEGESLTYRELNERANRLARGILSLGA
                     GEGRTAAVLCERSMDMIVSILAVLKSGSAYVPIDPEHPIQRMQHFFRDSGAKVLLTQR
                     KLKALAEEAEFKGVIVLADEEESYHADARNLALPLDSAAMANLTYTSGTTGTPKGNIV
                     THANILRTVKETNYLSITEQDTILGLSNYVFDAFMFDMFGSLLNGAKLVLIPKETVLD
                     MARLSRVIERENISILMITTALFHLLVDLNPACLSTLRKIMFGGERASVEHVRKALQT
                     VGKGKLLHMYGPSESTVFATYHPVDELEEHTLSVPIGKPVSNTEVYILDRTGHVQPAG
                     IAGELCVSGEGLVKGYYNRPELTEEKFVPHPFTSGERMYKTGDLARWLPNGDIEFIGR
                     IDHQVKIRGQRIELGEIEHQLQTHDRVQESVVLAVDQGAGDKLLCAYYVGEGDISSQE
                     MREHAAKDLPAYMVPAVFIQMDELPLTGNGKIDRRALPIPDANVSRGVSYVAPRNGTE
                     QKVADIWAQVLQAEQVGAYDHFFDIGGHSLAGMKMLALVHQELGVELSLKDLFQSPTV
                     EGLAQVIASAEKGTAASISPAEKQDTYPVSSPQKRMYVLQQLEDAQTSYNMPAVLRLT
                     GELDVERLNSVMQQLMQRHEALRTTFEIKDGETVQRIWEEAECEIAYFEAPEEETERI
                     VSEFIKPFKIDQLPLFRIGLIKHSDTEHVLLFDMHHIISDGASVGVLIEELSKLYDGE
                     TLEPLRIQYKDYAVWQQQFIQSELYKKQEEHWLKELDGELPVLTLPTDYSRPAVQTFE
                     GDRIAFSLEAGKADALRRLAKETDSTLYMVLLASYSAFLSKISGQDDIIVGSPVAGRS
                     QADVSRVIGMFVNTLALRTYPKGEKTFADYLNEVKETALSAFDAQDYPLEDLIGNVQV
                     QRDTSRNPLFDAVFSMQNANIKDLTMKGIQLEPHPFERKTAKFDLTLTADETDGGLTF
                     VLEYNTALFKQETIERWKQYWMELLDAVTGNPNQPLSSLSLVTETEKQALLEAWKGKA
                     LPVPTDKTVHQLFEETAQRHKDRPAVTYNGQSWTYGELNAKANRLARILMDCGISPDD
                     RVGVLTKPSLEMSAAVLGVLKAGAAFVPIDPDYPDQRIEYILQDSGAKLLLKQEGISV
                     PDSYTGDVILLDGSRTILSLPLDENDEENPETAVTAENLAYMIYTSGTTGQPKGVMVE
                     HHALVNLCFWHHDAFSMTAEDRSAKYAGFGFDASIWEMFPTWTIGAELHVIEEAIRLD
                     IVRLNDYFETNGVTITFLPTQLAEQFMELENTSLRVLLTGGDKLKRAVKKPYTLVNNY
                     GPTENTVVATSAEIHPEEGSLSIGRAIANTRVYILGEGNQVQPEGVAGELCVAGRGLA
                     RGYLNREDETAKRFVADPFVPGERMYRTGDLVKWTGGGIEYIGRIDQQVKVRGYRIEL
                     SEIEVQLAQLSEVQDAAVTAVKDKGGNTAIAAYVTPESADIEALKSALKETLPDYMIP
                     AFWVTLNELPVTANGKVDRKALPEPDIEAGSGEYKAPTTDMEELLAGIWQDVLGMSEV
                     GVTDNFFSLGGDSIKGIQMASRLNQHGWKLEMKDLFQHPTIEELTQYVERAEGKQADQ
                     GPVEGEVILTPIQRWFFEKNFTNKHHWNQSVMLHAKKGFDPERVEKTLQALIEHHDAL
                     RMVYREGQEDVIQYNRGLEAASAQLEVIQIEGQAADYEDRIEREAERLQSSIDLQEGG
                     LLKAGLFQAEDGDHLLLAIHHLVVDGVSWRILLEDFAAVYTQLEQGNEPVLPQKTHSF
                     AEYAERLQDFANSKAFLKEKEYWRQLEEQAVAAKLPKDRESGDQRMKHTKTIEFSLTA
                     EETEQLTTKVHEAYHTEMNDILLTAFGLAMKEWTGQDRVSVHLEGHGREEIIEDLTIS
                     RTVGWFTSMYPMVLDMKHADDLGYQLKQMKEDIRHVPNKGVGYGILRYLTAPEHKEDV
                     AFSIQPDVSFNYLGQFDEMSDAGLFTRSELPSGQSLSPETEKPNALDVVGYIENGKLT
                     MSLAYHSLEFHEKTVQTFSDSFKAHLLRIIEHCLSQDGTELTPSDLGDDDLTLDELDK
                     LMEIF"
     misc_feature    376971..377876
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="Condensation domain; Region: Condensation;
                     pfam00668"
                     /db_xref="CDD:250042"
     misc_feature    377658..379619
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="Non-ribosomal peptide synthetase modules and
                     related proteins [Secondary metabolites biosynthesis,
                     transport, and catabolism]; Region: EntF; COG1020"
                     /db_xref="CDD:223951"
     misc_feature    377940..378218
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="HxxPF-repeated domain; Region: HxxPF_rpt;
                     pfam13745"
                     /db_xref="CDD:258038"
     misc_feature    378393..379835
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS); Region: A_NRPS; cd05930"
                     /db_xref="CDD:213296"
     misc_feature    order(378777..378779,378786..378803,378807..378812)
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="acyl-activating enzyme (AAE) consensus motif; other
                     site"
                     /db_xref="CDD:213296"
     misc_feature    order(378786..378791,379137..379142,379215..379232,
                     379302..379304,379497..379499,379533..379535,
                     379542..379544,379815..379817)
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="AMP binding site [chemical binding]; other site"
                     /db_xref="CDD:213296"
     misc_feature    379899..380087
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="Phosphopantetheine attachment site; Region:
                     PP-binding; pfam00550"
                     /db_xref="CDD:249951"
     misc_feature    380139..381005
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="Condensation domain; Region: Condensation;
                     pfam00668"
                     /db_xref="CDD:250042"
     misc_feature    380787..382742
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="Non-ribosomal peptide synthetase modules and
                     related proteins [Secondary metabolites biosynthesis,
                     transport, and catabolism]; Region: EntF; COG1020"
                     /db_xref="CDD:223951"
     misc_feature    381066..381338
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="HxxPF-repeated domain; Region: HxxPF_rpt;
                     pfam13745"
                     /db_xref="CDD:258038"
     misc_feature    381522..382952
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS), including Bacillus subtilis
                     termination module Surfactin (SrfA-C); Region:
                     A_NRPS_Srf_like; cd12117"
                     /db_xref="CDD:213325"
     misc_feature    order(381924..381926,381933..381950,381954..381959)
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="acyl-activating enzyme (AAE) consensus motif; other
                     site"
                     /db_xref="CDD:213325"
     misc_feature    order(381933..381938,382275..382280,382341..382358,
                     382425..382427,382620..382622,382656..382658,
                     382665..382667,382932..382934)
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="AMP binding site [chemical binding]; other site"
                     /db_xref="CDD:213325"
     misc_feature    383016..383210
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="Phosphopantetheine attachment site; Region:
                     PP-binding; pfam00550"
                     /db_xref="CDD:249951"
     misc_feature    383256..384125
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="Condensation domain; Region: Condensation;
                     pfam00668"
                     /db_xref="CDD:250042"
     misc_feature    383907..385829
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="Non-ribosomal peptide synthetase modules and
                     related proteins [Secondary metabolites biosynthesis,
                     transport, and catabolism]; Region: EntF; COG1020"
                     /db_xref="CDD:223951"
     misc_feature    384192..384458
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="HxxPF-repeated domain; Region: HxxPF_rpt;
                     pfam13745"
                     /db_xref="CDD:258038"
     misc_feature    384645..386039
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS); Region: A_NRPS; cd05930"
                     /db_xref="CDD:213296"
     misc_feature    order(385053..385055,385062..385079,385083..385088)
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="acyl-activating enzyme (AAE) consensus motif; other
                     site"
                     /db_xref="CDD:213296"
     misc_feature    order(385062..385067,385398..385403,385443..385460,
                     385518..385520,385713..385715,385746..385748,
                     385755..385757,386019..386021)
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="AMP binding site [chemical binding]; other site"
                     /db_xref="CDD:213296"
     misc_feature    386100..386291
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="Phosphopantetheine attachment site; Region:
                     PP-binding; pfam00550"
                     /db_xref="CDD:249951"
     misc_feature    386328..387242
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="Condensation domain; Region: Condensation;
                     pfam00668"
                     /db_xref="CDD:250042"
     misc_feature    387252..387671
                     /gene="srfAA"
                     /locus_tag="BSU03480"
                     /note="non-ribosomal peptide synthase domain TIGR01720;
                     Region: NRPS-para261"
                     /db_xref="CDD:233545"
     gene            387744..398495
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /db_xref="GeneID:938303"
     CDS             387744..398495
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /function="16.5: Explore"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15066026, 16166527,
                     16553878, 17227471; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="surfactin synthase subunit 2"
                     /protein_id="NP_388231.2"
                     /db_xref="GI:255767106"
                     /db_xref="GeneID:938303"
                     /translation="MSKKSIQKVYALTPMQEGMLYHAMLDPHSSSYFTQLELGIHGAF
                     DLEIFEKSVNELIRSYDILRTVFVHQQLQKPRQVVLAERKTKVHYEDISHADENRQKE
                     HIERYKQDVQRQGFNLAKDILFKVAVFRLAADQLYLVWSNHHIMMDGWSMGVLMKSLF
                     QNYEALRAGRTPANGQGKPYSDYIKWLGKQDNEEAESYWSERLAGFEQPSVLPGRLPV
                     KKDEYVNKEYSFTWDETLVARIQQTANLHQVTGPNLFQAVWGIVLSKYNFTDDVIFGT
                     VVSGRPSEINGIETMAGLFINTIPVRVKVERDAAFADIFTAVQQHAVEAERYDYVPLY
                     EIQKRSALDGNLLNHLVAFENYPLDQELENGSMEDRLGFSIKVESAFEQTSFDFNLIV
                     YPGKTWTVKIKYNGAAFDSAFIERTAEHLTRMMEAAVDQPAAFVREYGLVGDEEQRQI
                     VEVFNSTKAELPEGMAVHQVFEEQAKRTPASTAVVYEGTKLTYRELNAAANRLARKLV
                     EHGLQKGETAAIMNDRSVETVVGMLAVLKAGAAYVPLDPALPGDRLRFMAEDSSVRMV
                     LIGNSYTGQAHQLQVPVLTLDIGFEESEAADNLNLPSAPSDLAYIMYTSGSTGKPKGV
                     MIEHKSILRLVKNAGYVPVTEEDRMAQTGAVSFDAGTFEVFGALLNGAALYPVKKETL
                     LDAKQFAAFLREQSITTMWLTSPLFNQLAAKDAGMFGTLRHLIIGGDALVPHIVSKVK
                     QASPSLSLWNGYGPTENTTFSTSFLIDREYGGSIPIGKPIGNSTAYIMDEQQCLQPIG
                     APGELCVGGIGVARGYVNLPELTEKQFLEDPFRPGERIYRTGDLARWLPDGNIEFLGR
                     IDNQVKVRGFRIELGEIETKLNMAEHVTEAAVIIRKNKADENEICAYFTADREVAVSE
                     LRKTLSQSLPDYMVPAHLIQMDSLPLTPNGKINKKELPAPQSEAVQPEYAAPKTESEK
                     KLAEIWEGILGVKAGVTDNFFMIGGHSLKAMMMTAKIQEHFHKEVPIKVLFEKPTIQE
                     LALYLEENESKEEQTFEPIRQASYQQHYPVSPAQRRMYILNQLGQANTSYNVPAVLLL
                     EGEVDKDRLENAIQQLINRHEILRTSFDMIDGEVVQTVHKNISFQLEAAKGREEDAEE
                     IIKAFVQPFELNRAPLVRSKLVQLEEKRHLLLIDMHHIITDGSSTGILIGDLAKIYQG
                     ADLELPQIHYKDYAVWHKEQTNYQKDEEYWLDVFKGELPILDLPADFERPAERSFAGE
                     RVMFGLDKQITAQIKSLMAETDTTMYMFLLAAFNVLLSKYASQDDIIVGSPTAGRTHP
                     DLQGVPGMFVNTVALRTAPAGDKTFAQFLEEVKTASLQAFEHQSYPLEELIEKLPLTR
                     DTSRSPLFSVMFNMQNMEIPSLRLGDLKISSYSMLHHVAKFDLSLEAVEREEDIGLSF
                     DYATALFKDETIRRWSRHFVNIIKAAAANPNVRLSDVDLLSSAETAALLEERHMTQIT
                     EATFAALFEKQAQQTPDHSAVKAGGNLLTYRELDEQANQLAHHLRAQGAGNEDIVAIV
                     MDRSAEVMVSILGVMKAGAAFLPIDPDTPEERIRYSLEDSGAKFAVVNERNMTAIGQY
                     EGIIVSLDDGKWRNESKERPSSISGSRNLAYVIYTSGTTGKPKGVQIEHRNLTNYVSW
                     FSEEAGLTENDKTVLLSSYAFDLGYTSMFPVLLGGGELHIVQKETYTAPDEIAHYIKE
                     HGITYIKLTPSLFHTIVNTASFAKDANFESLRLIVLGGEKIIPTDVIAFRKMYGHTEF
                     INHYGPTEATIGAIAGRVDLYEPDAFAKRPTIGRPIANAGALVLNEALKLVPPGASGQ
                     LYITGQGLARGYLNRPQLTAERFVENPYSPGSLMYKTGDVVRRLSDGTLAFIGRADDQ
                     VKIRGYRIEPKEIETVMLSLSGIQEAVVLAVSEGGLQELCAYYTSDQDIEKAELRYQL
                     SLTLPSHMIPAFFVQVDAIPLTANGKTDRNALPKPNAAQSGGKALAAPETALEESLCR
                     IWQKTLGIEAIGIDDNFFDLGGHSLKGMMLIANIQAELEKSVPLKALFEQPTVRQLAA
                     YMEASAVSGGHQVLKPADKQDMYPLSSAQKRMYVLNQLDRQTISYNMPSVLLMEGELD
                     ISRLRDSLNQLVNRHESLRTSFMEANGEPVQRIIEKAEVDLHVFEAKEDEADQKIKEF
                     IRPFDLNDAPLIRAALLRIEAKKHLLLLDMHHIIADGVSRGIFVKELALLYKGEQLPE
                     PTLHYKDFAVWQNEAEQKERMKEHEAYWMSVLSGELPELDLPLDYARPPVQSFKGDTI
                     RFRTGSETAKAVEKLLAETGTTLHMVLHAVFHVFLSKISGQRDIVIGSVTAGRTNADV
                     QDMPGMFVNTLALRMEAKEQQTFAELLELAKQTNLSALEHQEYPFEDLVNQLDLPRDM
                     SRNPLFNVMVTTENPDKEQLTLQNLSISPYEAHQGTSKFDLTLGGFTDENGIGLQLEY
                     ATDLFAKETAEKWSEYVLRLLKAVADNPNQPLSSLLLVTETEKQALLEAWKGKALPVP
                     TDKTVHQLFEETVQRHKDRPAVTYNGQSWTYGELNAKANRLARILMDCGISPDDRVGV
                     LTKPSLEMSAAVLGVLKAGAAFVPIDPDYPDQRIEYILQDSGAKLLLKQEGISVPDSY
                     TGDVILLDGSRTILSLPLDENDEGNPETAVTAENLAYMIYTSGTTGQPKGVMVEHHAL
                     VNLCFWHHDAFSMTAEDRSAKYAGFGFDASIWEMFPTWTIGAELHVIDEAIRLDIVRL
                     NDYFETNGVTITFLPTQLAEQFMELENTSLRVLLTGGDKLKRAVKKPYTLVNNYGPTE
                     NTVVATSAEIHPEEGSLSIGRAIANTRVYILGEGNQVQPEGVAGELCVAGRGLARGYL
                     NREDETAKRFVADPFVPGERMYRTGDLVKWVNGGIEYIGRIDQQVKVRGYRIELSEIE
                     VQLAQLSEVQDAAVTAVKDKGGNTAIAAYVTPETADIEALKSTLKETLPDYMIPAFWV
                     TLNELPVTANGKVDRKALPEPDIEAGSGEYKAPTTDMEELLAGIWQDVLGMSEVGVTD
                     NFFSLGGDSIKGIQMASRLNQHGWKLEMKDLFQHPTIEELTQYVERAEGKQADQGPVE
                     GEVILTPIQRWFFEKNFTNKHHWNQSVMLHAKKGFDPERVEKTLQALIEHHDALRMVY
                     REENGDIVQVYKPIGESKVSFEIVDLYGSDEEMLRSQIKLLANKLQSSLDLRNGPLLK
                     AEQYRTEAGDHLLIAVHHLVVDGVSWRILLEDFASGYMQAEKEESLVFPQKTNSFKDW
                     AEELAAFSQSAHLLQQAEYWSQIAAEQVSPLPKDCETEQRIVKDTSSVLCELTAEDTK
                     HLLTDVHQPYGTEINDILLSALGLTMKEWTKGAKIGINLEGHGREDIIPNVNISRTVG
                     WFTAQYPVVLDISDADASAVIKTVKENLRRIPDKGVGYGILRYFTETAETKGFTPEIS
                     FNYLGQFDSEVKTDFFEPSAFDMGRQVSGESEALYALSFSGMIRNGRFVLSCSYNEKE
                     FERATVEEQMERFKENLLMLIRHCTEKEDKEFTPSDFSAEDLEMDEMGDIFDMLEENL
                     K"
     misc_feature    387759..388661
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="Condensation domain; Region: Condensation;
                     pfam00668"
                     /db_xref="CDD:250042"
     misc_feature    388437..390377
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="Non-ribosomal peptide synthetase modules and
                     related proteins [Secondary metabolites biosynthesis,
                     transport, and catabolism]; Region: EntF; COG1020"
                     /db_xref="CDD:223951"
     misc_feature    389178..390596
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS), including Bacillus subtilis
                     termination module Surfactin (SrfA-C); Region:
                     A_NRPS_Srf_like; cd12117"
                     /db_xref="CDD:213325"
     misc_feature    order(389574..389576,389583..389600,389604..389609)
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="acyl-activating enzyme (AAE) consensus motif; other
                     site"
                     /db_xref="CDD:213325"
     misc_feature    order(389583..389588,389925..389930,389991..390008,
                     390069..390071,390264..390266,390300..390302,
                     390309..390311,390576..390578)
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="AMP binding site [chemical binding]; other site"
                     /db_xref="CDD:213325"
     misc_feature    390657..390848
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="Phosphopantetheine attachment site; Region:
                     PP-binding; pfam00550"
                     /db_xref="CDD:249951"
     misc_feature    390906..391760
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="Condensation domain; Region: Condensation;
                     pfam00668"
                     /db_xref="CDD:250042"
     misc_feature    391545..393503
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="Non-ribosomal peptide synthetase modules and
                     related proteins [Secondary metabolites biosynthesis,
                     transport, and catabolism]; Region: EntF; COG1020"
                     /db_xref="CDD:223951"
     misc_feature    391824..392096
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="HxxPF-repeated domain; Region: HxxPF_rpt;
                     pfam13745"
                     /db_xref="CDD:258038"
     misc_feature    392271..393713
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS); Region: A_NRPS; cd05930"
                     /db_xref="CDD:213296"
     misc_feature    order(392667..392669,392676..392693,392697..392702)
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="acyl-activating enzyme (AAE) consensus motif; other
                     site"
                     /db_xref="CDD:213296"
     misc_feature    order(392676..392681,393033..393038,393099..393116,
                     393189..393191,393384..393386,393420..393422,
                     393429..393431,393693..393695)
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="AMP binding site [chemical binding]; other site"
                     /db_xref="CDD:213296"
     misc_feature    393777..393968
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="Phosphopantetheine attachment site; Region:
                     PP-binding; pfam00550"
                     /db_xref="CDD:249951"
     misc_feature    394020..394883
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="Condensation domain; Region: Condensation;
                     pfam00668"
                     /db_xref="CDD:250042"
     misc_feature    394677..396593
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="Non-ribosomal peptide synthetase modules and
                     related proteins [Secondary metabolites biosynthesis,
                     transport, and catabolism]; Region: EntF; COG1020"
                     /db_xref="CDD:223951"
     misc_feature    394950..395222
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="HxxPF-repeated domain; Region: HxxPF_rpt;
                     pfam13745"
                     /db_xref="CDD:258038"
     misc_feature    395409..396803
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS); Region: A_NRPS; cd05930"
                     /db_xref="CDD:213296"
     misc_feature    order(395817..395819,395826..395843,395847..395852)
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="acyl-activating enzyme (AAE) consensus motif; other
                     site"
                     /db_xref="CDD:213296"
     misc_feature    order(395826..395831,396162..396167,396207..396224,
                     396282..396284,396477..396479,396510..396512,
                     396519..396521,396783..396785)
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="AMP binding site [chemical binding]; other site"
                     /db_xref="CDD:213296"
     misc_feature    396864..397055
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="Phosphopantetheine attachment site; Region:
                     PP-binding; pfam00550"
                     /db_xref="CDD:249951"
     misc_feature    397092..398006
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="Condensation domain; Region: Condensation;
                     pfam00668"
                     /db_xref="CDD:250042"
     misc_feature    398013..398465
                     /gene="srfAB"
                     /locus_tag="BSU03490"
                     /note="non-ribosomal peptide synthase domain TIGR01720;
                     Region: NRPS-para261"
                     /db_xref="CDD:233545"
     gene            390880..391020
                     /gene="comS"
                     /locus_tag="BSU03500"
                     /db_xref="GeneID:938310"
     CDS             390880..391020
                     /gene="comS"
                     /locus_tag="BSU03500"
                     /function="16.3: Control"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 10361283, 16554821,
                     8752331, 9696775; Product type r: regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein S"
                     /protein_id="NP_388232.1"
                     /db_xref="GI:16077419"
                     /db_xref="GeneID:938310"
                     /translation="MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWR
                     EK"
     misc_feature    <390922..>391017
                     /gene="comS"
                     /locus_tag="BSU03500"
                     /note="envelope glycoprotein C; Provisional; Region:
                     PHA03271"
                     /db_xref="CDD:223030"
     gene            398532..402359
                     /gene="srfAC"
                     /locus_tag="BSU03510"
                     /db_xref="GeneID:938308"
     CDS             398532..402359
                     /gene="srfAC"
                     /locus_tag="BSU03510"
                     /function="16.5: Explore"
                     /function="16.8: Protect"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 1a: Function experimentally demonstrated
                     in the studied strain; PubMedId: 15066026, 16166527,
                     16553878, 17227471; Product type e: enzyme"
                     /codon_start=1
                     /transl_table=11
                     /product="surfactin synthase subunit 3"
                     /protein_id="NP_388233.2"
                     /db_xref="GI:255767107"
                     /db_xref="GeneID:938308"
                     /translation="MSQFSKDQVQDMYYLSPMQEGMLFHAILNPGQSFYLEQITMKVK
                     GSLNIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEIDLTHLTGSE
                     QTAKINEYKEQDKIRGFDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQ
                     DLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQASLRYWREYLEGFEGQTTFAEQ
                     RKKQKDGYEPKELLFSLSEAETKAFTELAKSQHTTLSTALQAVWSVLISRYQQSGDLA
                     FGTVVSGRPAEIKGVEHMVGLFINVVPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYV
                     PLYDIQSQADQPKLIDHIIVFENYPLQDAKNEESSENGFDMVDVHVFEKSNYDLNLMA
                     SPGDEMLIKLAYNENVFDEAFILRLKSQLLTAIQQLIQNPDQPVSTINLVDDREREFL
                     LTGLNPPAQAHETKPLTYWFKEAVNANPDAPALTYSGQTLSYRELDEEANRIARRLQK
                     HGAGKGSVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLL
                     THQEMKEQAAELPYTGTTLFIDDQTRFEEQASDPATAIDPNDPAYIMYTSGTTGKPKG
                     NITTHANIQGLVKHVDYMAFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHT
                     LLDTERLTDLILQENVNVMFATTALFNLLTDAGEDWMKGLRCILFGGERASVPHVRKA
                     LRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQ
                     PFGAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEY
                     AGRIDDQVKIRGHRIELEEIEKQLQEYPGVKDAVVVADRHESGDASINAYLVNRTQLS
                     AEDVKAHLKKQLPAYMVPQTFTFLDELPLTTNGKVNKRLLPKPDQDQLAEEWIGPRNE
                     MEETIAQIWSEVLGRKQIGIHDDFFALGGHSLKAMTAASRIKKELGIDLPVKLLFEAP
                     TIAGISAYLKNGGSDGLQDVTIMNQDQEQIIFAFPPVLGYGLMYQNLSSRLPSYKLCA
                     FDFIEEEDRLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMV
                     DSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNLIS
                     TGQVKADIDLLTSGADFDMPEWLASWEEATTGVYRVKRGFGTHAEMLQGETLDRNAEI
                     LLEFLNTQTVTVS"
     misc_feature    398556..399458
                     /gene="srfAC"
                     /locus_tag="BSU03510"
                     /note="Condensation domain; Region: Condensation;
                     pfam00668"
                     /db_xref="CDD:250042"
     misc_feature    399234..401183
                     /gene="srfAC"
                     /locus_tag="BSU03510"
                     /note="Non-ribosomal peptide synthetase modules and
                     related proteins [Secondary metabolites biosynthesis,
                     transport, and catabolism]; Region: EntF; COG1020"
                     /db_xref="CDD:223951"
     misc_feature    399963..401393
                     /gene="srfAC"
                     /locus_tag="BSU03510"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS), including Bacillus subtilis
                     termination module Surfactin (SrfA-C); Region:
                     A_NRPS_Srf_like; cd12117"
                     /db_xref="CDD:213325"
     misc_feature    order(400365..400367,400374..400391,400395..400400)
                     /gene="srfAC"
                     /locus_tag="BSU03510"
                     /note="acyl-activating enzyme (AAE) consensus motif; other
                     site"