LOCUS NC_001856 38829 bp DNA linear CON 24-APR-2023
DEFINITION Borreliella burgdorferi B31 plasmid lp38, complete sequence.
ACCESSION NC_001856
VERSION NC_001856.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN02603966
Assembly: GCF_000008685.2
KEYWORDS RefSeq.
SOURCE Borreliella burgdorferi B31
ORGANISM Borreliella burgdorferi B31
Bacteria; Spirochaetota; Spirochaetia; Spirochaetales;
Borreliaceae; Borreliella.
REFERENCE 1 (bases 1 to 38829)
AUTHORS Fraser,C.M., Casjens,S., Huang,W.M., Sutton,G.G., Clayton,R.,
Lathigra,R., White,O., Ketchum,K.A., Dodson,R., Hickey,E.K.,
Gwinn,M., Dougherty,B., Tomb,J.F., Fleischmann,R.D., Richardson,D.,
Peterson,J., Kerlavage,A.R., Quackenbush,J., Salzberg,S.,
Hanson,M., van Vugt,R., Palmer,N., Adams,M.D., Gocayne,J.,
Weidman,J., Utterback,T., Watthey,L., McDonald,L., Artiach,P.,
Bowman,C., Garland,S., Fuji,C., Cotton,M.D., Horst,K., Roberts,K.,
Hatch,B., Smith,H.O. and Venter,J.C.
TITLE Genomic sequence of a Lyme disease spirochaete, Borrelia
burgdorferi
JOURNAL Nature 390 (6660), 580-586 (1997)
PUBMED 9403685
REFERENCE 2 (bases 1 to 38829)
AUTHORS Mongodin,E.F., Fraser-Liggett,C.M., Qiu,W.-G., Dunn,J.J.,
Luft,B.J., Schutzer,S.E. and Casjens,S.R.
TITLE Direct Submission
JOURNAL Submitted (09-NOV-2011) Institute for Genome Sciences, 801 West
Baltimore Street, Office #622, Baltimore, MD 201201, USA
REMARK Protein update by submitter
REFERENCE 3 (bases 1 to 38829)
AUTHORS Fraser,C.M., Casjens,S., Huang,W.M., Sutton,G.G., Clayton,R.A.,
Lathigra,R., White,O., Ketchum,K.A., Dodson,R., Hickey,E.K.,
Gwinn,M., Dougherty,B., Tomb,J.-F., Fleischmann,R.D.,
Richardson,D., Peterson,J., Kerlavage,A.R., Quackenbush,J.,
Salzberg,S., Hanson,M., van-Vugt,R., Palmer,N., Adams,M.D.,
Gocayne,J.D., Weidman,J., Utterback,T., Watthey,L., McDonald,L.,
Artiach,P., Bowman,C., Garland,S., Fujii,C., Cotton,M.D., Horst,K.,
Roberts,K., Hatch,B., Smith,H.O. and Venter,J.C.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-1997) The Institute for Genomic Research, 9712
Medical Center Dr, Rockville, MD 20850, USA
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
AE000787.1.
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 04/24/2023 01:17:34
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.5
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 1,554
CDSs (total) :: 1,514
Genes (coding) :: 1,446
CDSs (with protein) :: 1,446
Genes (RNA) :: 40
rRNAs :: 2, 1, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 1, 2 (5S, 16S, 23S)
tRNAs :: 32
ncRNAs :: 3
Pseudo Genes (total) :: 68
CDSs (without protein) :: 68
Pseudo Genes (ambiguous residues) :: 0 of 68
Pseudo Genes (frameshifted) :: 48 of 68
Pseudo Genes (incomplete) :: 26 of 68
Pseudo Genes (internal stop) :: 20 of 68
Pseudo Genes (multiple problems) :: 20 of 68
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..38829
/organism="Borreliella burgdorferi B31"
/mol_type="genomic DNA"
/strain="B31"
/type_material="type strain of Borrelia burgdorferi"
/db_xref="taxon:224326"
/plasmid="lp38"
gene 482..1211
/locus_tag="BB_RS04670"
/pseudo
CDS 482..1211
/locus_tag="BB_RS04670"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014540851.1"
/note="frameshifted; internal stop; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="virulence associated lipoprotein"
gene 1864..1994
/locus_tag="BB_RS07810"
/pseudo
CDS 1864..1994
/locus_tag="BB_RS07810"
/inference="COORDINATES: protein motif:HMM:NF017444.2"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="P13 family porin"
gene complement(3692..3739)
/locus_tag="BB_RS07815"
CDS complement(3692..3739)
/locus_tag="BB_RS07815"
/inference="COORDINATES: protein motif:HMM:NF023742.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_231001444.1"
/translation="MYNKMLSDKKDYYEK"
gene 4576..5496
/locus_tag="BB_RS04690"
/old_locus_tag="BB_J08"
CDS 4576..5496
/locus_tag="BB_RS04690"
/old_locus_tag="BB_J08"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011703902.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="P12 family lipoprotein"
/protein_id="WP_010890357.1"
/translation="MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENAL
NNLYGNQEEKKDFKNFEELKDESLIALAKSLASTRPTTVGNIESAVLPVGHVVSLETS
ANKVSIPTISIKHNQKKEIKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMY
SLKHEYTLIRNNFYDVITKIRNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIM
VHIDIAEQEIRSAAFFFNEAKEILKEGIIKRLESENKVASQLARQALNKVEDALKSLE
ASSSKRGLAMGRRRIIKELIENAKTVLSKS"
gene 6089..6862
/gene="ospD"
/locus_tag="BB_RS04695"
/old_locus_tag="BB_J09"
CDS 6089..6862
/gene="ospD"
/locus_tag="BB_RS04695"
/old_locus_tag="BB_J09"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010890353.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="outer surface protein OspD"
/protein_id="WP_010890353.1"
/translation="MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEG
ANSNYESKKQSILSELNQLLKQTTNSLKEAKNTTDNLNASNEANKVVEAVINAVNLIS
SAADQVKSATKNMHDLAQMAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKL
YKEQQKISESESESDYSDSAEIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIK
TETTNNTKLADIKEAAELVLQIAKNAKEIVQEVVALLNT"
gene 7270..7476
/locus_tag="BB_RS04700"
/old_locus_tag="BB_J10"
CDS 7270..7476
/locus_tag="BB_RS04700"
/old_locus_tag="BB_J10"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012686512.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012686512.1"
/translation="MGARDEFKNGIRKLDEKIERARIELSTKITDVRSELSKQVKGLI
FPFYWILGIFIPAVIGLFLYLLQK"
gene complement(8877..9155)
/locus_tag="BB_RS04705"
/old_locus_tag="BB_J13"
CDS complement(8877..9155)
/locus_tag="BB_RS04705"
/old_locus_tag="BB_J13"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010890359.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_010890359.1"
/translation="MLHINHANEAFKEISSAKDKIDSSDIGKGIVDVQKTHNRLHDLL
RDIKTEFYSQKNSFLNGVRAEKSKKKNQILFRSTSSINGKIRNANYIL"
gene complement(10518..11105)
/locus_tag="BB_RS04710"
/old_locus_tag="BB_J16"
CDS complement(10518..11105)
/locus_tag="BB_RS04710"
/old_locus_tag="BB_J16"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014540852.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="chromosome replication/partitioning protein"
/protein_id="WP_010257233.1"
/translation="MKIKAEKDKEALFSNRFGDCNEETNLNDDQDKELANYNNLKEQL
KYNLKDDINNKIQRMKILYEIKQKELYKYDGFARFNDFIKSFEVAKSQAYRYLKIYQK
VLEGKVSIDKIKEVGFKAILRDIKAKDSLNEDNHSESEGANESIPIRILVKDKELYNF
CKQDTKRLYFIIEKIYKEKRDVLSELIIEYEKNKK"
gene complement(11152..11889)
/locus_tag="BB_RS04715"
/old_locus_tag="BB_J17"
CDS complement(11152..11889)
/locus_tag="BB_RS04715"
/old_locus_tag="BB_J17"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012622519.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParA family protein"
/protein_id="WP_010257237.1"
/translation="MDRKKSNIITIANLKGGVGKSTLSILFSYVLKDLGKKVLLIDMD
SQNALTSYFRKYVFNFDKNNIYNLLIGNVYFDQCISKINDNIFIIPSHPFLDEFNDKN
LDNKENLLSFCLDKNVLGHDFDYIFLDTPPSFSFILKNALNTTNHIIIPVQPETWSIE
SLEILMKKITDKSYNISIVVNQFIKNRNILKEVEDALYKRYSNYIKGKIHYYNSIKVF
IINRLEPDIKSKYYKEAKDVLKNILDL"
gene complement(11862..12452)
/locus_tag="BB_RS04720"
/old_locus_tag="BB_J18"
CDS complement(11862..12452)
/locus_tag="BB_RS04720"
/old_locus_tag="BB_J18"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012686530.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF226 domain-containing protein"
/protein_id="WP_010890354.1"
/translation="MNDLLEKLKARKKEIISKKEAEYNNNINKGTKERTAFFRIEEID
NKKIYYTKIFKYLVKFRIANKDNKLSLTFQKLNNKKNYYLFNLFPLKEDNKFLGIKYG
WDKLEKPFFLRQNNKSYVIKKLYYLEFKFSKGSIKCYVQSLRTLLRKKDKESTKYYKF
NLEHIKRMENTVYKFYSKKLKNKGVIYKWIEKNQIL"
gene complement(12445..13440)
/locus_tag="BB_RS04725"
/old_locus_tag="BB_J19"
CDS complement(12445..13440)
/locus_tag="BB_RS04725"
/old_locus_tag="BB_J19"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010890355.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="plasmid maintenance protein"
/protein_id="WP_010890355.1"
/translation="MALNLLNHNHNKTNTNKLLSKDSRLKKIISVINYLNKSFEKKYD
ISIYRIHFNSEKLKELYPHHQIDILRVLNSNISKEGYKPTVIRTLREDLRFLIHIKAI
EKKILTFSNNLGKFKGKLCIYKVSPIAYKLISAYFEAYKADLYRKIKKSKDGLDTQNV
TKNVTVYINYHKNIYNKNSIETVFKKSYTKKKTKKKNKKEFTKNNLEKRLKLPEEITK
EIISIAKKTKNPDKTYKNTLFNYKDFLNYLSYDYKKEDISYFFLSKLKEYKNKIHFMR
KYAPYKTDFYLLAGEFKDSYHSKWKTNKKTNFSGHVKEIANNILSKILEKELKFE"
gene 16520..17329
/locus_tag="BB_RS04730"
/old_locus_tag="BB_J23"
CDS 16520..17329
/locus_tag="BB_RS04730"
/old_locus_tag="BB_J23"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014540855.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_010890366.1"
/translation="MREISCCFLLLTFSVVCVYSFDVSSRKFYGILEGYYSGKIEELS
KKNDEDVYIYRFGKFKETLSEMSSGIKSYFFNLVDYQIARLLQNKEGRRNSSKSYSVL
KSTQKSLLELIASTDFKGLEKTIQSDICRILGDVNLMLLRYAGGAALSKLANEARKYF
EKSLKINSKNSFANTSLASWYLYAPRIAGGDPNKTLSFAQLGFKYGQTDVEKYFANIW
ISQAHFLLKNEKESLKYILKAGEIFPNGAFHKIVLEQNKAGNLFMDFPIKN"
gene 17388..18170
/locus_tag="BB_RS04735"
/old_locus_tag="BB_J24"
CDS 17388..18170
/locus_tag="BB_RS04735"
/old_locus_tag="BB_J24"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010257261.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_010890367.1"
/translation="MLRALLIFLVNISLFSFEKEVKVYIDKIESVHTKYCSGNFEFDF
FSPDKIFTNELQNIENVILMKYRRESIQYNYLNLLMSLVLCDVSYLINDPHKYNDLIQ
KLIRNYNCALKISLEDDNVPADYFRALGELAINLIPHNRKGLYSYFVNAKRHLETALK
IDGDNVKAFIPLSILYTVRVSNRDFYKILFAKSYIDRAEDSNLNDRQKYLKELVKSSF
LIRTNRRLEAIECLKKATAIFPNGNMAVLAIEKLKEGNSFYY"
gene 18214..19254
/locus_tag="BB_RS04740"
/old_locus_tag="BB_J25"
CDS 18214..19254
/locus_tag="BB_RS04740"
/old_locus_tag="BB_J25"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010890368.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_010890368.1"
/translation="MKKFLFLILPCFGVFANELNDELGDFVIRGVDFEFRLDYLSVPN
NFENNFDFILNIKENDSKISPFFRLGTDYSKMFLFGTGLAYDFRKFFSKVFYEIRVPF
IFDSKNIEHIGNFEVGYNFDYLRLENRFRSGLMNHLIKETEANVGGSYHNALTVENTV
AILLPIYYSEFQRADIRTSFLYKYLSDNNEQFYRVHWNLKYLVSIPFGELGFKADLGV
AGDFKKSSSSIFETGFDYNALNFYALTIPKMGQDSLYFNVVSNFGLEYRLFFLESLKN
LASDLFLVLSADIGYGIKEDLLLDKGKFLYILGFGMGYKLFKEVPFVFKVGINQDKKL
SFGFLLSSIIFE"
gene 19313..20008
/locus_tag="BB_RS04745"
/old_locus_tag="BB_J26"
CDS 19313..20008
/locus_tag="BB_RS04745"
/old_locus_tag="BB_J26"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010257267.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016887 - ATP hydrolysis activity
[Evidence IEA]"
/GO_function="GO:0042626 - ATPase-coupled transmembrane
transporter activity [Evidence IEA]"
/GO_function="GO:0140359 - ABC-type transporter activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="WP_010257267.1"
/translation="MGNVNLDLKLVNKKYKIGQEIIHANKDISLNLKSRDMVWISGPT
GSGKTTLMNLLSGIDSLDTGEIRFNSTLLSSMNEKDRTLFRRYNVGLIFQHFELIPSL
TGFDNISLPLRFSRESAKRLKSKAEELIEFFKLSKFVNKKPRYMSGGQRQRIGIARAF
VYDPKLIIGDEITSHLDKETAIFVYTSIQKYLKEKNAIGIFVSHDYNLKNLANKLYRI
EDGVLSLVGGECV"
gene 20001..21230
/locus_tag="BB_RS04750"
/old_locus_tag="BB_J27"
CDS 20001..21230
/locus_tag="BB_RS04750"
/old_locus_tag="BB_J27"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010890369.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="WP_010890369.1"
/translation="MFKLAFYNIFRDLRRTIILSLLLASSVVFLLVFVGYMNFSREGM
EKSFVSSSGHIQIAKENYFNPKFSNLKNGLLLEEKDINLIRNEIDSYDELQSTNLIVN
FDGLLGNSSTSNPVFAFAYEDPDIITSSLSLLEGEPIFHDSNAGEFLLGSNLASSFGI
EKITETNSDLTLMTNLLGRGLNFQNIKVAGIIKFPFSTADNIFAITTIKTLKDLFAFE
GGAHVIQVFLKDSSTLETFKKKLDNFKKNKGISFDYNDWFEINPYFKSVLGMTRTTFM
FILVLISLLIFIAFFQIMTALSIERTRELGTLRAIGLTKLELFYSLFLEIVIISVVNI
VVGVILAYFAKLFIQFQKISFTPPGYSETYYINIFYYASDIIYVSIFMLILAIFSSIL
PFSKASKKSVVEVMNDA"
gene 21220..21948
/locus_tag="BB_RS04755"
/old_locus_tag="BB_J28"
CDS 21220..21948
/locus_tag="BB_RS04755"
/old_locus_tag="BB_J28"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010257273.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_162287114.1"
/translation="MMLKIFVIVFNFCVLNLLNAGDGKSLIKEFENLYYPQLKNGIYA
FKMNFKINVKNNLEESVGLRIINVDNKDVRLIYMSGSKTDFAFLSIRNKGHFMLGRQA
KIPIKVSSSYKVKGASELKDILGLSFNTDFVLLKSEDNRVEFQSKEKSIYPFVDLLKI
NKNDFKTLHKDKKLKILKEVIYRKGNIKGIDAFVYFEIEDKAFNDSSTKIYVENIIST
NLNNSIFSLKGFNRIFDLYSRYIN"
gene 22007..23008
/locus_tag="BB_RS04760"
/old_locus_tag="BB_J29"
CDS 22007..23008
/locus_tag="BB_RS04760"
/old_locus_tag="BB_J29"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014486308.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_244264099.1"
/translation="MALPGFLFAESSLFLKEHLGFKTKFSLLLPDEDKKDFFGTGALQ
FDNEAYLGFLLNYKILEFGIAPSFIVQNNDQYFSFNKLFFNLSFNDFIFKLGRQNYYL
GNGLIENIVLKRTTIEPEWFFEFYYFISNYSVSLGSMLDKESLDKFSSPKYLSPWLYF
QASFNEVDLLAMVEFPFSIENKTFDITVIFDFLFEIYSGIFFYSTLRQDLLWSKNYKF
DDDDNRFLLGLRYYISFENDVFNDLSIVFESYSKNNNYFLGAGIKLAWIYELLQTTVS
LRTNLNTHSLQFYFENNFLILKECSLKVSNILEFNKKINLKDTPFYNMFSIELKIEL"
gene 23366..24088
/locus_tag="BB_RS04765"
/old_locus_tag="BB_J31"
CDS 23366..24088
/locus_tag="BB_RS04765"
/old_locus_tag="BB_J31"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014540861.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_010890362.1"
/translation="MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASIS
AKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKKIDESLKLLIASGYDASYPLSDN
MKIGIGRICLLDKILEAVMPKINDSDNDNFDDNSCEKIKKVVDEFNKNEKDEYSCSIM
SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESL
KLLSEAASSIAEACKRLAYDIL"
gene complement(25337..26407)
/locus_tag="BB_RS04770"
/old_locus_tag="BB_J34"
CDS complement(25337..26407)
/locus_tag="BB_RS04770"
/old_locus_tag="BB_J34"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010890363.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="WP_010890363.1"
/translation="MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNI
GSVILEQDGNKKGDTTASKVALDQVTEHANSELMLNDDPDSSISKYNQENTTGKLTEE
DMDKLKAFFVKTITYQGILNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQ
ALNDLEKNKLDEEYTKLNQMLKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKIT
SFTIDEGNNNEERKENVDNLKKVNNILSISEKTIETASVAYANAFAVIVSRLSSAEFI
TAVNEFKDATEKYANGNKGDHAVDVVVGAIAGIAFDNENRFERAKMFANKEKGAEVDK
MIAAIEKLRATYTAVKPKNKDK"
gene complement(26995..28053)
/locus_tag="BB_RS04775"
/old_locus_tag="BB_J36"
CDS complement(26995..28053)
/locus_tag="BB_RS04775"
/old_locus_tag="BB_J36"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014540863.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="WP_010890364.1"
/translation="MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKI
SKSGTAASSDKQEKNTSDVTGDAKKHTSSPYMLADALIVSDTTNRDRDKQENKDKLNE
EDKKKLNAFFSTTKTYQSSLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQ
ALADLEKLKLDEKYTQLSTMLKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVK
DYATAQSAADDEKKRNIDNLKIVRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFK
QAVKEFNDAAKQYANGNKGDNAVNVIVGTISSMPYVKFKDEFARAKMFARNYRGDEVD
KMIRAIDKLCDVYKKVAL"
gene complement(28169..28291)
/locus_tag="BB_RS07945"
CDS complement(28169..28291)
/locus_tag="BB_RS07945"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_010257589.1"
/translation="MNLNRRFQRVKTFANNEGGKLNKMTATIDKLCAVYKKVIS"
gene complement(29561..29641)
/locus_tag="BB_RS07820"
CDS complement(29561..29641)
/locus_tag="BB_RS07820"
/inference="COORDINATES: protein motif:HMM:NF033729.0"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_231010736.1"
/translation="MFISFLPIGKVDPKPDINTNPENIQN"
gene complement(29905..30771)
/locus_tag="BB_RS04785"
/old_locus_tag="BB_J41"
CDS complement(29905..30771)
/locus_tag="BB_RS04785"
/old_locus_tag="BB_J41"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014540538.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="complement regulator-acquiring protein"
/protein_id="WP_010890356.1"
/translation="MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKS
LKKTKRSNNSRNLKNTSNHTNSENLTGNSTKNPSENNQNLENESQNSKSSNQNSQEET
TISKLKNIGKDLEAQKKKEDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKR
IIYPSLNYDTKKILVLKEILEKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDT
LQTLSEKEAEKLLQGVKLDLKKKQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDK
YSHPLYLLNQAD"
gene 31220..32140
/locus_tag="BB_RS04790"
/old_locus_tag="BB_J43"
CDS 31220..32140
/locus_tag="BB_RS04790"
/old_locus_tag="BB_J43"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014540860.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_010257606.1"
/translation="MLPDEDKKDFFGTGALQFANEAYLGFLLNYKILEFGIAPSFIVQ
NNDQYFSFNKLFFNLSFNDFIFKLVRQNYYLGNGLIENIVLKRTTIEPEWFFEFYYFI
SNYSVSLGSMLDKESLDKFLSPKYLSPWLYFQASFNEVDLLAMVEFPFSIENKTFDIA
VIFDFLFEIYSGIFFYSTLRQDLLWSKNYKFDDDDNRFLLGLRYYISFENDVFNDLSI
VFESYSKNNNYFLGAGIKLAWIYELLQTTVSLRTNLNTHSLQFYFENNFLILKECSLK
VSNILEFNKKINLKDTPFYNMFSIELKIEL"
gene 32498..33220
/locus_tag="BB_RS04795"
/old_locus_tag="BB_J45"
CDS 32498..33220
/locus_tag="BB_RS04795"
/old_locus_tag="BB_J45"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014540861.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="WP_010890370.1"
/translation="MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASIS
AKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKKIDESLKLLIASGYDASYPLSDN
MKIGIGRICLLDKILEAVMPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIM
SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESL
KLLSEAASAIAEACKRLAYGIL"
gene complement(34372..34668)
/locus_tag="BB_RS04800"
/old_locus_tag="BB_J46"
CDS complement(34372..34668)
/locus_tag="BB_RS04800"
/old_locus_tag="BB_J46"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010257615.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_010257615.1"
/translation="MDKFLTSNHPPIIIFTIGALCATVLICLIIIFIIHGIINPILIK
KFKSINNSLQKITKEFEEMKKRVGQLESISKKLELNNKPAKKPISLYGLKKSQI"
gene complement(34905..35549)
/locus_tag="BB_RS04805"
/old_locus_tag="BB_J47"
CDS complement(34905..35549)
/locus_tag="BB_RS04805"
/old_locus_tag="BB_J47"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012686535.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_231014816.1"
/translation="MLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKC
YFKEFKSGLIKSVFFKKLDVNVNSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLM
NFKNVIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKLNKMKQYTPAIVVNV
FKININDALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY"
gene complement(35634..36248)
/locus_tag="BB_RS04810"
/old_locus_tag="BB_J48"
CDS complement(35634..36248)
/locus_tag="BB_RS04810"
/old_locus_tag="BB_J48"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010890372.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_010890372.1"
/translation="MKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKI
DILHQSNTGAVKFKISLINHLGSVAIVYDYNSASERFYLDFEIVTNKKPFNLLDVSLN
DVVIKPEVLLASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLAEIARISGI
NFRVKCIERETGVLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS"
gene 36502..36969
/locus_tag="BB_RS04815"
/old_locus_tag="BB_J50"
CDS 36502..36969
/locus_tag="BB_RS04815"
/old_locus_tag="BB_J50"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010257625.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="P52 family lipoprotein"
/protein_id="WP_012665832.1"
/translation="MEMFFYEKYMVENIYTYLELNAIEIITLKDIKKSLYEFYKLLSD
METDINPLSLLFPIKSHDILNEFLFSLGSKRAKELIKLFCEIKTNLGNNVFENEVFIF
YLSISDINFFKLLYLSCSNNVDNLNINIVYDESILIYQKFYHIKDSLESKLYD"
gene complement(37415..37774)
/locus_tag="BB_RS04820"
CDS complement(37415..37774)
/locus_tag="BB_RS04820"
/inference="COORDINATES: protein motif:HMM:NF013114.2"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="variable large family protein"
/protein_id="WP_106404847.1"
/translation="MYCCAATKTVKSGGEEPKGKNADEATNPIEAAIGGNDDSDATAF
KGNMEKDNQIAAAIVLRGMAKNGEFAVKMGRKPSGDGDNIRVLVNNAANKTVDALSKL
ALEAINESLTKIAKTIH"
gene complement(37927..38331)
/locus_tag="BB_RS04825"
CDS complement(37927..38331)
/locus_tag="BB_RS04825"
/inference="COORDINATES: protein motif:HMM:NF013114.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_044283617.1"
/translation="MAKTLNKAKDKLAKFISEKGGKTTEGKNTDTAKEDNSTVNPIDD
EISKINDMMGKMIDAANTIVENVAETVTEAMGEVVEVKSIGNVATKADVKSVVEIAKG
IKKIIEAAGIADKLKAEADKSTKPISEESNNK"
gene complement(38349..38522)
/locus_tag="BB_RS04830"
CDS complement(38349..38522)
/locus_tag="BB_RS04830"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_157658503.1"
/translation="MKKISSAIFTITFLVLINCKSDTRKAINSIQIQKFTSFDGLIDG
FLRLNSNPKKSER"
CONTIG join(AE000787.1:1..38829)
//
