LOCUS NC_003047 3654135 bp DNA circular BCT 25-MAY-2010
DEFINITION Sinorhizobium meliloti 1021, complete genome.
ACCESSION NC_003047
VERSION NC_003047.1 GI:15963753
DBLINK Project: 19
KEYWORDS .
SOURCE Sinorhizobium meliloti 1021
ORGANISM Sinorhizobium meliloti 1021
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
REFERENCE 1 (bases 1 to 3654135)
AUTHORS Capela,D., Barloy-Hubler,F., Gouzy,J., Bothe,G., Ampe,F., Batut,J.,
Boistard,P., Becker,A., Boutry,M., Cadieu,E., Dreano,S., Gloux,S.,
Godrie,T., Goffeau,A., Kahn,D., Kiss,E., Lelaure,V., Masuy,D.,
Pohl,T., Portetelle,D., Puehler,A., Purnelle,B., Ramsperger,U.,
Renard,C., Thebault,P., Vandenbol,M., Weidner,S. and Galibert,F.
TITLE Analysis of the chromosome sequence of the legume symbiont
Sinorhizobium meliloti strain 1021
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 98 (17), 9877-9882 (2001)
PUBMED 11481430
REFERENCE 2 (bases 1 to 3654135)
AUTHORS Galibert,F., Finan,T.M., Long,S.R., Puhler,A., Abola,P., Ampe,F.,
Barloy-Hubler,F., Barnett,M.J., Becker,A., Boistard,P., Bothe,G.,
Boutry,M., Bowser,L., Buhrmester,J., Cadieu,E., Capela,D.,
Chain,P., Cowie,A., Davis,R.W., Dreano,S., Federspiel,N.A.,
Fisher,R.F., Gloux,S., Godrie,T., Goffeau,A., Golding,B., Gouzy,J.,
Gurjal,M., Hernandez-Lucas,I., Hong,A., Huizar,L., Hyman,R.W.,
Jones,T., Kahn,D., Kahn,M.L., Kalman,S., Keating,D.H., Kiss,E.,
Komp,C., Lelaure,V., Masuy,D., Palm,C., Peck,M.C., Pohl,T.M.,
Portetelle,D., Purnelle,B., Ramsperger,U., Surzycki,R.,
Thebault,P., Vandenbol,M., Vorholter,F.J., Weidner,S., Wells,D.H.,
Wong,K., Yeh,K.C. and Batut,J.
TITLE The composite genome of the legume symbiont Sinorhizobium meliloti
JOURNAL Science 293 (5530), 668-672 (2001)
PUBMED 11474104
REFERENCE 3 (bases 1 to 3654135)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (05-OCT-2001) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 3654135)
AUTHORS Gouzy,J.
CONSRTM MELILO EU Consortium
TITLE Direct Submission
JOURNAL Submitted (26-JUL-2001) MELILO EU Consortium
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AL591688.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..3654135
/organism="Sinorhizobium meliloti 1021"
/mol_type="genomic DNA"
/strain="1021"
/db_xref="taxon:266834"
rep_origin 1..477
/inference="non-experimental evidence, no additional
details recorded"
/note="oriC OR SMc04880;
PUTATIVE ORIGIN OF REPLICATION;
predicted by Homology"
gene 478..1299
/locus_tag="SMc02793"
/db_xref="GeneID:1231626"
CDS 478..1299
/locus_tag="SMc02793"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384107.1"
/db_xref="GI:15963754"
/db_xref="GeneID:1231626"
/translation="MENRKNYFHLHLISDSTGETLIAAGRAAAAQFQSSHALEHVYPL
IRNRKQLMQVMDAVDGAPGIVLYTIVDRELAGLIDQRCREIGVPCVSVLDPIIELFQS
YLGSPSRRRSGAQHVMDAEYFARIEALNFTMDHDDGQVPSDFNEADVVLVGVSRTSKT
PTSIYLANRGIKTANIPIVPGVPLPDALLKATKPLIVGLIASAERLSQVRQHRVLGTT
QSFHGEDYTDRAAIAEELKYARSLCARNNWPLIDVTRRSIEETAAAIVALRPRLR"
misc_feature 490..1296
/locus_tag="SMc02793"
/note="Domain of unknown function (DUF299); Region:
DUF299; cl00780"
/db_xref="CDD:174387"
gene 1347..1946
/gene="maf"
/locus_tag="SMc02792"
/db_xref="GeneID:1231627"
CDS 1347..1946
/gene="maf"
/locus_tag="SMc02792"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Maf; overexpression in Bacillus subtilis inhibits
septation in the dividing cell"
/codon_start=1
/transl_table=11
/product="Maf-like protein"
/protein_id="NP_384108.1"
/db_xref="GI:15963755"
/db_xref="GeneID:1231627"
/translation="MKPLLILASASPFRRALLSNAGLAFEARAAAIDERALEQPLEAS
GASPADVALALAEAKAKDVARYFSDALVIGSDQTMSLGTRVYHKPRDMTEAAEHLRSL
SGRMHSLNSAIVLVRNDEVVWRHVSTANMTVRPLSDGFIDRHLAKVGEKALTSVGAYQ
LEGEGIQLFERIEGDYFTILGLPMLPLLSKLRELGAIDA"
misc_feature 1359..1883
/gene="maf"
/locus_tag="SMc02792"
/note="Nucleotide binding protein Maf. Maf has been
implicated in inhibition of septum formation in
eukaryotes, bacteria and archaea, but homologs in
B.subtilis and S.cerevisiae are nonessential for cell
division. Maf has been predicted to be a nucleotide-
or...; Region: Maf; cd00555"
/db_xref="CDD:29954"
misc_feature order(1371..1373,1386..1388,1446..1448,1521..1523,
1572..1574,1608..1610)
/gene="maf"
/locus_tag="SMc02792"
/note="active site"
/db_xref="CDD:29954"
misc_feature order(1503..1505,1707..1724)
/gene="maf"
/locus_tag="SMc02792"
/note="dimer interface; other site"
/db_xref="CDD:29954"
gene 1939..2799
/gene="aroE"
/locus_tag="SMc02791"
/db_xref="GeneID:1231628"
CDS 1939..2799
/gene="aroE"
/locus_tag="SMc02791"
/EC_number="1.1.1.25"
/function="small molecule metabolism; amino acid
biosynthesis; chorismate"
/inference="non-experimental evidence, no additional
details recorded"
/note="AroE; catalyzes the conversion of shikimate to
3-dehydroshikimate"
/codon_start=1
/transl_table=11
/product="shikimate 5-dehydrogenase"
/protein_id="NP_384109.1"
/db_xref="GI:15963756"
/db_xref="GeneID:1231628"
/translation="MHDSRETFVNHAFVTGYPVKHSRSPLIHGHWLKQFGIRGSYRAH
EVTPEAFPDFMRQIKEGRTDFCGGNVTIPHKEAAFRLADRPDELSAELGAANTLWLEN
GKIRATNTDGRGFVANLDERAKGWDRISAAVILGAGGASRAVIQAIRDRGVKTIHVVN
RTPERARELADRFGTAVHAHSMAALPEVVSGAGLFVNTTSLGMDGEPAPAIDFSGLAP
DAVVTDIVYVPLKTPLLRQAEEQGFRIVDGLGMLLHQAVPGFEKWFGLRPVVDETLRQ
IIISDMDRHA"
misc_feature 1972..2772
/gene="aroE"
/locus_tag="SMc02791"
/note="shikimate 5-dehydrogenase; Reviewed; Region: aroE;
PRK00258"
/db_xref="CDD:166875"
misc_feature 1978..2232
/gene="aroE"
/locus_tag="SMc02791"
/note="Shikimate dehydrogenase substrate binding domain;
Region: Shikimate_dh_N; pfam08501"
/db_xref="CDD:149523"
misc_feature 2266..2733
/gene="aroE"
/locus_tag="SMc02791"
/note="NAD(P) binding domain of Shikimate dehydrogenase;
Region: NAD_bind_Shikimate_DH; cd01065"
/db_xref="CDD:133443"
misc_feature order(2269..2271,2617..2619,2692..2694,2701..2703)
/gene="aroE"
/locus_tag="SMc02791"
/note="shikimate binding site; other site"
/db_xref="CDD:133443"
misc_feature order(2347..2349,2356..2358,2416..2421,2530..2538,
2611..2613,2680..2682,2689..2694)
/gene="aroE"
/locus_tag="SMc02791"
/note="NAD(P) binding site; other site"
/db_xref="CDD:133443"
gene 2796..3380
/gene="coaE"
/locus_tag="SMc02790"
/db_xref="GeneID:1231629"
CDS 2796..3380
/gene="coaE"
/locus_tag="SMc02790"
/EC_number="2.7.1.24"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the phosphorylation of the 3'-hydroxyl
group of dephosphocoenzyme A to form coenzyme A; involved
in coenzyme A biosynthesis"
/codon_start=1
/transl_table=11
/product="dephospho-CoA kinase"
/protein_id="NP_384110.1"
/db_xref="GI:15963757"
/db_xref="GeneID:1231629"
/translation="MIIVGLTGSIGMGKSTAAGMFRELGVPVNDADEVVHMLYSGEAV
APVEAAFPGVAKGGVIDRAELSLRLVAAPERLAELERIVHPLVRAKEQEFVARHRADG
APFVLLDIPLLFETKAEARLDRIVVVTCDPEMQRERVMKRPGMTAEKFAMILKRQVPD
SEKRARADYIVDTSDSFDVTRQQIRAIVDDLRAG"
misc_feature 2796..3374
/gene="coaE"
/locus_tag="SMc02790"
/note="Dephospho-CoA kinase [Coenzyme metabolism]; Region:
CoaE; COG0237"
/db_xref="CDD:30586"
misc_feature 2802..3329
/gene="coaE"
/locus_tag="SMc02790"
/note="Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24)
catalyzes the phosphorylation of dephosphocoenzyme A
(dCoA) to yield CoA, which is the final step in CoA
biosynthesis; Region: DPCK; cd02022"
/db_xref="CDD:30195"
misc_feature order(2814..2816,2889..2891,3045..3047,3126..3131,
3264..3266)
/gene="coaE"
/locus_tag="SMc02790"
/note="CoA-binding site; other site"
/db_xref="CDD:30195"
misc_feature order(2817..2825,2832..2837,3207..3209,3312..3314)
/gene="coaE"
/locus_tag="SMc02790"
/note="ATP-binding; other site"
/db_xref="CDD:30195"
gene 3574..4302
/gene="dnaQ"
/locus_tag="SMc02789"
/db_xref="GeneID:1231630"
CDS 3574..4302
/gene="dnaQ"
/locus_tag="SMc02789"
/EC_number="2.7.7.7"
/function="macromolecule metabolism; macromolecule
synthesis, modification; dna - replication, repair,
restr./modif."
/inference="non-experimental evidence, no additional
details recorded"
/note="3'-5' exonuclease of DNA polymerase III"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit epsilon"
/protein_id="NP_384111.1"
/db_xref="GI:15963758"
/db_xref="GeneID:1231630"
/translation="MREIIFDTETTGLDNREDRVIEIGGIELENQFPTGRTIHIYINP
GERKVHPEALAVHGITDEFLKDKPPFADVAQEIVDFFGDARWVAHNATFDIGFINAEF
ERLGLPPIGSDRVIDTLALARRKHPMGPNSLDALCRRYGVDNSHRTRHGALLDSELLA
EVYIEMIGGRQAALGLVVTEAGDRPIEADDGPVVVVTRERPLRPRLTEAEIAAHAALV
AKIGANAIWSKYSEADDVLRSEAV"
misc_feature 3577..4197
/gene="dnaQ"
/locus_tag="SMc02789"
/note="Proteobacterial; Region: dnaQ_proteo; TIGR01406"
/db_xref="CDD:130473"
misc_feature 3580..4074
/gene="dnaQ"
/locus_tag="SMc02789"
/note="This subfamily is composed of the epsilon subunit
of Escherichia coli DNA polymerase III (polIII) and
similar proteins. PolIII is the main DNA replicating
enzyme in bacteria, functioning as the chromosomal
replicase. It is a holoenzyme complex of ten...; Region:
DNA_pol_III_epsilon_Ecoli_like; cd06131"
/db_xref="CDD:99835"
misc_feature order(3592..3603,3607..3612,3727..3732,3739..3744,
3838..3843,3847..3855,3967..3972,4012..4014,4021..4023,
4036..4038)
/gene="dnaQ"
/locus_tag="SMc02789"
/note="active site"
/db_xref="CDD:99835"
misc_feature order(3592..3603,3607..3612,3727..3732,3739..3744,
3838..3843,3847..3852,3967..3972,4012..4014,4021..4023,
4036..4038)
/gene="dnaQ"
/locus_tag="SMc02789"
/note="substrate binding site; other site"
/db_xref="CDD:99835"
misc_feature order(3592..3594,3598..3600,3853..3855,4021..4023,
4036..4038)
/gene="dnaQ"
/locus_tag="SMc02789"
/note="catalytic site; other site"
/db_xref="CDD:99835"
gene complement(4408..4914)
/gene="secB"
/locus_tag="SMc02788"
/db_xref="GeneID:1231631"
CDS complement(4408..4914)
/gene="secB"
/locus_tag="SMc02788"
/function="cell processes; transport of large molecules;
protein, peptide secretion"
/inference="non-experimental evidence, no additional
details recorded"
/note="molecular chaperone that is required for the normal
export of envelope proteins out of the cell cytoplasm; in
Escherichia coli this proteins forms a homotetramer in the
cytoplasm and delivers proteins to be exported to SecA"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecB"
/protein_id="NP_384112.1"
/db_xref="GI:15963759"
/db_xref="GeneID:1231631"
/translation="MTTDTASNGNGSAQQQSPSLNILAQYVKDLSFENPGAPRSLQAR
DRSPSININVNVNANPLAENDFDVVLSLSAQAKDGDKMLFNVELAYGGVFRVAGFPQE
HMLPLLFIECPRLLFPFARQIVADATRNGGFPPLMIDPIDFAQMFAQRMAEEKVRAQV
ANTNDTAN"
misc_feature complement(4468..4857)
/gene="secB"
/locus_tag="SMc02788"
/note="Preprotein translocase subunit SecB. SecB is a
cytoplasmic component of the multisubunit membrane-bound
enzyme termed Sec protein translocase, which is the main
constituent of the General Secretory (type II) Pathway
involved in translocation of nascent...; Region:
Translocase_SecB; cl00251"
/db_xref="CDD:174069"
misc_feature complement(order(4654..4656,4660..4662,4816..4818,
4828..4830))
/gene="secB"
/locus_tag="SMc02788"
/note="SecA binding site; other site"
/db_xref="CDD:29643"
misc_feature complement(order(4645..4647,4651..4653,4657..4659,
4663..4665))
/gene="secB"
/locus_tag="SMc02788"
/note="Preprotein binding site; other site"
/db_xref="CDD:29643"
gene complement(5082..5657)
/locus_tag="SMc02787"
/db_xref="GeneID:1231632"
CDS complement(5082..5657)
/locus_tag="SMc02787"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384113.1"
/db_xref="GI:15963760"
/db_xref="GeneID:1231632"
/translation="MRFLIPLVILGLPLAEIAGFVAVGREIGVAMTLLLVFASAVAGI
MLLRIQGFGVLRRVQEAARTGNDPGLDVLGGVLIFIAAILLIVPGFISDLVGLLIFLP
PVRRAIAAFLRRRMTILSSATGFYRSSRRQSPGPQSSGPQSSGPQSAGPQSAGTPREQ
RRGPLTIDLDEDEFSRKTKDEDDPPPDRPPH"
misc_feature complement(<5286..5657)
/locus_tag="SMc02787"
/note="FxsA cytoplasmic membrane protein; Region: FxsA;
cl01148"
/db_xref="CDD:174554"
gene 5792..6493
/locus_tag="SMc02786"
/db_xref="GeneID:1231633"
CDS 5792..6493
/locus_tag="SMc02786"
/function="cell processes; transport of large molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative translocase transmembrane protein"
/protein_id="NP_384114.1"
/db_xref="GI:15963761"
/db_xref="GeneID:1231633"
/translation="MGSFDFITFFFLIAAVVIFLQLRSVLGRRTGSERPPFDPYSPRD
IAQGPEAKDNGKVVQLPRRETAEDESRYAAIEIVAKAGTPLNAQLRAMTDADPNFNPA
EFLNGAKMAYEMIVMAFADGDRKTLKGLLSREVYEGFEAAIAEREAKGEVVKSTFVGI
DKADIVHAEIKDAEENITVRIISQLISATYDKQGKLVDGDADSVAEVNDLWTFARDIR
SRDPNWKLIATESEN"
misc_feature 5792..6490
/locus_tag="SMc02786"
/note="Tim44-like domain; Region: Tim44; cl09208"
/db_xref="CDD:158454"
gene 6511..7629
/locus_tag="SMc02785"
/db_xref="GeneID:1231634"
CDS 6511..7629
/locus_tag="SMc02785"
/EC_number="3.2.1.-"
/function="structural elements; cell envelope; murein
sacculus, peptidoglycan"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative lytic murein transglycosylase A
protein"
/protein_id="NP_384115.1"
/db_xref="GI:15963762"
/db_xref="GeneID:1231634"
/translation="MAFHLEPVSFSELPGWSADDPAPVIASLRRCHRHATEVKPYKTG
SLGISVGDLLPAFEAAGSDFSDAAAARAFFEAQFVPFRICPEEKRTGFVTAFYEPEIE
VRAGPDAEFRFPFYRRPSDLVDIDDTNRPAGMDPYFVFGRRRDGRIEEFPDRRAIEEG
FLSGRGLEIAYARSKVDVFFVHVQGAARLIYPDGSRRRITYAAKTGHRFSAVGKLLID
RGEIDAATVSMASIRAWLAAHADRADEVLWHNRSFIFFREAPVEEEGLGPVAAAKVPL
EPGRSLAVDRLIHTFGVPFYVASETLTHLDGGHPFGRLMLALDTGSAIVGPARGDIFT
GSGDQAGELAGCVRNDAEFFIFVPRAASVRYRPQSSHG"
misc_feature 6514..7608
/locus_tag="SMc02785"
/note="Membrane-bound lytic murein transglycosylase [Cell
envelope biogenesis, outer membrane]; Region: MltA;
COG2821"
/db_xref="CDD:32649"
misc_feature 6808..7281
/locus_tag="SMc02785"
/note="MltA specific insert domain; Region: MltA;
pfam03562"
/db_xref="CDD:146283"
misc_feature 7348..7581
/locus_tag="SMc02785"
/note="3D domain; Region: 3D; cl01439"
/db_xref="CDD:154402"
gene 7622..8188
/locus_tag="SMc02784"
/db_xref="GeneID:1231635"
CDS 7622..8188
/locus_tag="SMc02784"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384116.1"
/db_xref="GI:15963763"
/db_xref="GeneID:1231635"
/translation="MAKDKKLSTEDRILWGKVARSARPMPGRLENLEELLGGTAEIKA
VPGPEAAPSSSTPEKAGRGFSLSRDKAEHRPHHALERPVKRKLAKGRLTLEARIDLHG
MIQSEAHGLLLQFLLRARDRGLRHVLVITGKGTSLGSDGALKRAVPLWFSLPEFRPLI
SSYEPAARNHGGEGALYVRLARAKGGAS"
misc_feature 7622..8176
/locus_tag="SMc02784"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG2840"
/db_xref="CDD:32668"
misc_feature 7913..8161
/locus_tag="SMc02784"
/note="Smr domain; Region: Smr; cl02619"
/db_xref="CDD:174725"
gene 8185..8562
/locus_tag="SMc02783"
/db_xref="GeneID:1231636"
CDS 8185..8562
/locus_tag="SMc02783"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384117.1"
/db_xref="GI:15963764"
/db_xref="GeneID:1231636"
/translation="MTPFGEAVRELRRRKGVSQKEMAAAIGVSPAYLSALEHGKRGAP
SFDFLQRVAGYFNVIWDEADELFRIAHLSDPKVVLDTSGLPPGHTAFANRLSMEIRGL
SAETIRALEDVLEKATFPDKDRG"
misc_feature 8197..8370
/locus_tag="SMc02783"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(8209..8211,8221..8223,8296..8298)
/locus_tag="SMc02783"
/note="non-specific DNA binding site; other site"
/db_xref="CDD:28977"
misc_feature order(8218..8220,8293..8295)
/locus_tag="SMc02783"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(8239..8244,8275..8277,8284..8286,8296..8301)
/locus_tag="SMc02783"
/note="sequence-specific DNA binding site; other site"
/db_xref="CDD:28977"
gene 8697..11132
/gene="gyrB"
/locus_tag="SMc02782"
/db_xref="GeneID:1231637"
CDS 8697..11132
/gene="gyrB"
/locus_tag="SMc02782"
/EC_number="5.99.1.3"
/function="macromolecule metabolism; macromolecule
synthesis, modification; dna - replication, repair,
restr./modif."
/inference="non-experimental evidence, no additional
details recorded"
/note="negatively supercoils closed circular
double-stranded DNA"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit B"
/protein_id="NP_384118.1"
/db_xref="GI:15963765"
/db_xref="GeneID:1231637"
/translation="MTDISETEAGAIAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGS
GLHHMVYEVVDNAIDEALAGHADIVTVTLNPDGSVTVTDNGRGIPTDIHREEGVSAAE
VIMTQLHAGGKFDQNSYKVSGGLHGVGVSVVNALSVSLKLKIRRAGKIHEMSFTHGVA
DGPLKVTGDAGGETGTEVTFTPSEQTFSNIEFEFGTLEHRLRELAFLNSGVRIVLTDK
RHSDIRREEMMYDGGLEAFVAYLDRAKKPLVQKPVSIRGEKDGITVEVAMWWNDSYHE
NVLCFTNNIPQRDGGTHMAGFRGALTRQITSYADTSGITKKEKVSLTGDDCREGLTAV
LSVKVPDPKFSSQTKDKLVSSEVRPVVESLVNEALSVWLEEHPSDAKILVGKVVEAAA
AREAARKARELTRRKGALDISSLPGKLADCSERDPAKSELFLVEGDSAGGSAKQGRSR
ENQAILPLRGKILNVERARFDKMLSSQEIGTLITALGTSIGKDEFNADKLRYHKIIIM
TDADVDGAHIRTLLLTFFFRQMPELIERGHLYIAQPPLYKVARGKSVQYLKDEKALED
YLISMGLEEASLELASGEVRVGQDLREVINDALRLRSLMEGLHSRYNRSVVEQAAIAG
ALNVELNGERDEYQLIAAEVARRLDVIAEETERGWEAAVTAEGGLKLERMVRGVKEAA
VLDMALIGSSDARHIDQLKARLKEVYGAPPVLRRRDGTQEISGPRALLDAIFAAGRKG
LTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVTDATDADGLFSRLMGDEVEPRRDF
IQENALSVANLDI"
misc_feature 8709..11129
/gene="gyrB"
/locus_tag="SMc02782"
/note="DNA gyrase subunit B; Validated; Region: gyrB;
PRK05644"
/db_xref="CDD:168149"
misc_feature 8820..>9056
/gene="gyrB"
/locus_tag="SMc02782"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cl00075"
/db_xref="CDD:173995"
misc_feature 9390..9860
/gene="gyrB"
/locus_tag="SMc02782"
/note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
a ribosomal S5 domain 2-like fold, of the type found in
proteins of the type IIA family of DNA topoisomerases
similar to the B subunits of E. coli DNA gyrase and E.
coli Topoisomerase IV which are...; Region:
TopoII_Trans_DNA_gyrase; cd00822"
/db_xref="CDD:48467"
misc_feature 9543..9545
/gene="gyrB"
/locus_tag="SMc02782"
/note="anchoring element; other site"
/db_xref="CDD:48467"
misc_feature order(9717..9719,9726..9731,9735..9737)
/gene="gyrB"
/locus_tag="SMc02782"
/note="dimer interface; other site"
/db_xref="CDD:48467"
misc_feature order(9735..9737,9741..9743)
/gene="gyrB"
/locus_tag="SMc02782"
/note="ATP binding site; other site"
/db_xref="CDD:48467"
misc_feature 9984..10328
/gene="gyrB"
/locus_tag="SMc02782"
/note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in proteins of the type IIA family of DNA topoisomerases
similar to the Escherichia coli GyrB subunit. TopoIIA
enzymes cut both strands of...; Region:
TOPRIM_TopoIIA_GyrB; cd03366"
/db_xref="CDD:173786"
misc_feature order(10002..10007,10014..10016,10224..10226,10230..10232,
10236..10238)
/gene="gyrB"
/locus_tag="SMc02782"
/note="active site"
/db_xref="CDD:173786"
misc_feature order(10002..10004,10224..10226)
/gene="gyrB"
/locus_tag="SMc02782"
/note="putative metal-binding site; other site"
/db_xref="CDD:173786"
misc_feature 10905..11096
/gene="gyrB"
/locus_tag="SMc02782"
/note="DNA gyrase B subunit, carboxyl terminus; Region:
DNA_gyraseB_C; pfam00986"
/db_xref="CDD:144542"
gene complement(11232..11828)
/locus_tag="SMc02781"
/db_xref="GeneID:1231638"
CDS complement(11232..11828)
/locus_tag="SMc02781"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative oxidoreductase protein"
/protein_id="NP_384119.1"
/db_xref="GI:15963766"
/db_xref="GeneID:1231638"
/translation="MTEINHRRADHPIHSIFLERWSPRAFTGEEIGEKDLLALFEAAR
WAPSASNLQPWRFVYARHGTEHFARLLSTLDEGNQRWAKNASALVIILSKTHRVTSTG
ELRPAYTHAFDTGASWFALALQTQLAGWHAHAMAGVDREKAMQVLGVPEHYRVEAAVA
IGRIADPSTLPGDLREREKPSQRKPVSELVFEGRFTGE"
misc_feature complement(11256..11804)
/locus_tag="SMc02781"
/note="Nitroreductase-like family 2. A subfamily of the
nitroreductase family containing uncharacterized proteins
that are similar to nitroreductase. Nitroreductase
catalyzes the reduction of nitroaromatic compounds such as
nitrotoluenes, nitrofurans and...; Region:
Nitroreductase_2; cd02138"
/db_xref="CDD:48385"
misc_feature complement(order(11418..11423,11679..11681,11757..11759,
11763..11765,11769..11771))
/locus_tag="SMc02781"
/note="putative FMN binding site; other site"
/db_xref="CDD:48385"
gene 11996..13450
/gene="gabD1"
/locus_tag="SMc02780"
/db_xref="GeneID:1231639"
CDS 11996..13450
/gene="gabD1"
/locus_tag="SMc02780"
/EC_number="1.2.1.16"
/function="small molecule metabolism; central intermediary
metabolism; pool of unassigned individual reversibles
reactions"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : probable;
Gene name confidence : probable;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="succinate-semialdehyde dehydrogenase [NADP+]
protein"
/protein_id="NP_384120.1"
/db_xref="GI:15963767"
/db_xref="GeneID:1231639"
/translation="MNLKDPSLFRQAALVGETWIEADPKNAIEVNNPATGEIIGRVPK
LGAADTRTAIEAAARVQKEWAARTAKERSAVLRRWFELMIENKDDLGRILTMEQGKPL
AEATGEIVYGASFIEWFAEEARRVYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPN
AMITRKAGPALAAGCAMVLKPAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGA
EMTSNPTVRKLTFTGSTEVGAELYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEG
ALIAKFRNNGQTCVCANRIYVQDGVYEAFSDKLAQAVAKLKTGNGMEDGVILGPLIDQ
PALKKVEEHVADALAKGARVVQGGRRHSLGGTFYEATVLADVTQAMAVAREETFGPVA
PLFRFKDESDVIAQANDTEFGLASYFYAKDLARVFRVAEALEYGMVGVNTGLISTAEA
PFGGVKLSGLGREGSKYGIEEFMEIKYVCLGGIA"
misc_feature 12056..13429
/gene="gabD1"
/locus_tag="SMc02780"
/note="delta-1-pyrroline-5-carboxylate dehydrogenase,
group 2, putative; Region: D1pyr5carbox2; TIGR01237"
/db_xref="CDD:130304"
misc_feature 12083..13435
/gene="gabD1"
/locus_tag="SMc02780"
/note="Mitochondrial succinate-semialdehyde dehydrogenase
and ALDH family members 5A1 and 5F1-like; Region:
ALDH_F5_SSADH_GabD; cd07103"
/db_xref="CDD:143421"
misc_feature order(12197..12199,12224..12226,12347..12349,12356..12361,
12365..12391,12407..12415,12428..12430,12674..12676,
12710..12712,12722..12724,12731..12733,12902..12904,
12914..12916,13052..13054,13256..13258,13262..13267,
13277..13279,13283..13285,13292..13294,13298..13318,
13334..13336,13343..13348,13364..13366,13379..13381,
13415..13435)
/gene="gabD1"
/locus_tag="SMc02780"
/note="tetramerization interface; other site"
/db_xref="CDD:143421"
misc_feature order(12452..12466,12488..12490,12533..12535,12539..12544,
12686..12697,12704..12706,12713..12718,12758..12766,
12860..12862,13151..13153,13157..13159,13235..13237,
13349..13351)
/gene="gabD1"
/locus_tag="SMc02780"
/note="NAD(P) binding site; other site"
/db_xref="CDD:143421"
misc_feature order(12464..12466,12758..12760,12851..12853,12860..12862)
/gene="gabD1"
/locus_tag="SMc02780"
/note="catalytic residues; other site"
/db_xref="CDD:143421"
repeat_region 13556..13585
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region complement(13606..14829)
/note="predicted by Homology"
/mobile_element="insertion sequence:ISRm19 OR SMc04427"
gene complement(13646..14611)
/gene="TRm19"
/locus_tag="SMc02779"
/db_xref="GeneID:1231640"
CDS complement(13646..14611)
/gene="TRm19"
/locus_tag="SMc02779"
/function="elements of external origin; transposon-related
functions"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="NP_384121.1"
/db_xref="GI:15963768"
/db_xref="GeneID:1231640"
/translation="MTEISMKAAGIDTGKIWLDVATYPVSDKQKVPNNADGWQTLADW
LERQGIGRVGIEASGGYERDVIAYLHQRGFEVVLLQPRQVRAFGLYKLRRAKNDQLDA
ALIAECAARSDARCHAPDSRLIAFGEWLLFIEQIEADIACLKTRRERFTDRWILEEID
RSIGELKSRCKAQLALLQAAVREHDDLARKLDLIESIDGIGIRTALTLVILMPELGRV
DREEIAALTGVAPYDDQSGKREGERHIAGGRARVRRALFNAALPASQRWNETLVELYD
RLTAKGKSHKAALIACVRKLIIFANTVVKRQTPWTKSAPQQNSCA"
misc_feature complement(13649..14593)
/gene="TRm19"
/locus_tag="SMc02779"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3547"
/db_xref="CDD:33349"
misc_feature complement(14108..14407)
/gene="TRm19"
/locus_tag="SMc02779"
/note="Transposase; Region: Transposase_9; pfam01548"
/db_xref="CDD:144952"
misc_feature complement(13784..14038)
/gene="TRm19"
/locus_tag="SMc02779"
/note="Transposase IS116/IS110/IS902 family; Region:
Transposase_20; pfam02371"
/db_xref="CDD:145490"
gene 14893..15693
/locus_tag="SMc02778"
/db_xref="GeneID:1231641"
CDS 14893..15693
/locus_tag="SMc02778"
/EC_number="4.1.2.-"
/function="small molecule metabolism; degradation; carbon
compounds"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative hydroxyacid aldolase protein"
/protein_id="NP_384122.1"
/db_xref="GI:15963769"
/db_xref="GeneID:1231641"
/translation="MPAPKNTFKAAIRENRFQLGLWVALASPYAAEVVAGSGYDWLLI
DGEHAPNDLPMLAAQYRAVAGGGSHPIVRLPVGDAVMIKQILDAGVQTLLIPMVDNVE
QARQLVRAVRYPPHGVRGVGAALGRATNFSRIGDYLENANDEICLLLQIESRAGLEAI
DAIAALDGVDGLFVGPADLAADMGHLGNPGHPEVRTAIIEAFARIERAGKARGIMTLD
PAQARDYRDLGADFMAIGTDVTLLVSATERLRREFLGESGPTRIESGY"
misc_feature 14893..15657
/locus_tag="SMc02778"
/note="2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
[Carbohydrate transport and metabolism]; Region: HpcH;
COG3836"
/db_xref="CDD:33628"
misc_feature 14908..15651
/locus_tag="SMc02778"
/note="Malate synthase catalyzes the Claisen condensation
of glyoxylate and acetyl-CoA to malyl-CoA , which
hydrolyzes to malate and CoA. This reaction is part of the
glyoxylate cycle, which allows certain organisms, like
plants and fungi, to derive their...; Region: malate_synt;
cl09155"
/db_xref="CDD:175021"
gene complement(15706..16584)
/locus_tag="SMc02777"
/db_xref="GeneID:1231642"
CDS complement(15706..16584)
/locus_tag="SMc02777"
/function="miscellaneous; not classified regulator"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transcription regulator protein"
/protein_id="NP_384123.1"
/db_xref="GI:15963770"
/db_xref="GeneID:1231642"
/translation="MAKQNTVFKDAFNRCLELFAETTTLPSEPELGQALGVSRTTVRA
ILARCEELSLIAWDKRSKTVLRRPEPSDYFPTAETDSLAERIERSFMRRILAGGAEPG
MQINELELAREIGAGTTSVREFLIRFSRFGLIEKRPNSHWVLKGFTREFALELTEVRE
MFELRSAARFVSLPDQDPAWEELKKIEAVHREILADIDNRYSEFSELDERLHLLVHKS
SSNRFIIDFYDVIAIVFHYHYQWNKANARERNARALEEHLDYIVALQSRDPMLAEQAC
RRHLKSARETLLQSIS"
misc_feature complement(16420..>16512)
/locus_tag="SMc02777"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cl00088"
/db_xref="CDD:173998"
misc_feature complement(order(16444..16446,16453..16458,16462..16476,
16498..16503,16507..16509))
/locus_tag="SMc02777"
/note="DNA binding site"
/db_xref="CDD:153418"
misc_feature complement(15712..16362)
/locus_tag="SMc02777"
/note="Transcriptional regulators [Transcription]; Region:
GntR; COG1802"
/db_xref="CDD:31987"
misc_feature complement(16165..16344)
/locus_tag="SMc02777"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cl00088"
/db_xref="CDD:173998"
misc_feature complement(order(16165..16170,16174..16179,16207..16209,
16216..16221,16225..16239,16261..16266,16336..16338,
16342..16344))
/locus_tag="SMc02777"
/note="DNA binding site"
/db_xref="CDD:153418"
misc_feature complement(15745..16125)
/locus_tag="SMc02777"
/note="FCD domain; Region: FCD; cl11656"
/db_xref="CDD:159608"
gene 16752..18257
/locus_tag="SMc02776"
/db_xref="GeneID:1231643"
CDS 16752..18257
/locus_tag="SMc02776"
/EC_number="4.2.1.7"
/function="small molecule metabolism; degradation; carbon
compounds"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative altronate hydrolase protein"
/protein_id="NP_384124.1"
/db_xref="GI:15963771"
/db_xref="GeneID:1231643"
/translation="MPAPSSILLSPDDNVVVATAAIAPGDRLAGGVSAVARIEPGHKA
AIRRIDVGEPVVKYGQAIGRATSPIAPGEHVHSHNLAFDQGRLAVGAAVPPEAASEAD
KARTFLGYRRADGRAATRNYIGIVASVNCSTTVCRAIADEANRRILPKYEGIDGFVPI
VHDQGCGMSSTGDGMKNLHRTLAGYARHANFGGVLMVGLGCEVNQLTLYGQSGAGAEK
RHFNIQEAGGSRRSVERALGILDEIAKEVAAARRVPIPVSEIIVGLQCGGSDGLSGIT
ANPALGAAVDILAAAGGTAILSETSEIYGAEHLLRSRAVNETVAVKLDGLIAWWEDYV
AMHGASLDNNPSPGNKRGGLTTILEKSLGAVAKGGRSPLTAVYNYAERVTEPGLVFMD
TPGYDPVSATGQVAGGANVIAFTTGRGSCFGCRPAPSIKLTSNTALYRAMEEDMDIDC
GVIASGETTIADLGRGIFELIIETASGRKTKSELFGYGDNEFVPWHLGATL"
misc_feature 16767..18188
/locus_tag="SMc02776"
/note="galactarate dehydratase; Region: galactar-dH20;
TIGR03248"
/db_xref="CDD:132292"
misc_feature 16788..16994
/locus_tag="SMc02776"
/note="SAF domain; Region: SAF; cl00555"
/db_xref="CDD:174283"
misc_feature 17058..18254
/locus_tag="SMc02776"
/note="SAF domain; Region: SAF; cl00555"
/db_xref="CDD:174283"
gene 18314..19333
/locus_tag="SMc02775"
/db_xref="GeneID:1231644"
CDS 18314..19333
/locus_tag="SMc02775"
/EC_number="1.1.1.122"
/function="small molecule metabolism; degradation; carbon
compounds"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative L-fucose dehydrogenase (D-threo aldose
1-dehydrogenase) protein"
/protein_id="NP_384125.1"
/db_xref="GI:15963772"
/db_xref="GeneID:1231644"
/translation="MQTRRIGRTALAVTEYSFGTAGLGGLYRECTREAAMATLDAAWE
AGIRYFDTAPFYGLGLAERRVGDFLRDKPRDSFVLSTKVGRLLHPVPENQVPDYSYVK
PLNFDVTYDYGYDAIMRSVEMSYARLGLNRIDILYVHDIGGYTHGAAKNAVYLRQLLD
SGLKALDELKSSGVISAYGLGVNEVPVCLDVMRQADIDCILLAGRYTLLDRSAVAELL
PLCAKKDTSLVVGGVFNSGILATGPVEGAHFDYMPATGEVRAKVAAMERIAGERGMPL
AAPALQFPLANPHVASVLLGTAKPSSLTRNMELTRYGIAPEDYAAFEPHTLVAPELGP
EAVRA"
misc_feature 18320..19282
/locus_tag="SMc02775"
/note="Aldo-keto reductases (AKRs) are a superfamily of
soluble NAD(P)(H) oxidoreductases whose chief purpose is
to reduce aldehydes and ketones to primary and secondary
alcohols. AKRs are present in all phyla and are of
importance to both health and...; Region: Aldo_ket_red;
cd06660"
/db_xref="CDD:119408"
misc_feature order(18368..18376,18464..18466,18479..18481,18557..18559,
18728..18733,18854..18859,18920..18922,19004..19021,
19142..19144,19193..19204,19217..19219,19226..19231)
/locus_tag="SMc02775"
/note="active site"
/db_xref="CDD:119408"
misc_feature order(18464..18466,18479..18481,18557..18559,18728..18730)
/locus_tag="SMc02775"
/note="catalytic tetrad; other site"
/db_xref="CDD:119408"
gene 19442..20431
/locus_tag="SMc02774"
/db_xref="GeneID:1231645"
CDS 19442..20431
/locus_tag="SMc02774"
/function="cell processes; transport of small molecules;
carbohydrates, organic acids, alcohols"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="ABC transporter periplasmic-binding protein"
/protein_id="NP_384126.1"
/db_xref="GI:15963773"
/db_xref="GeneID:1231645"
/translation="MSIAKRILSRRAFNALAGAAFVAAMVPATSFAQDVTIPIIVKDT
TSFYWQIVLAGARAAGKDLGVNVPELGAQSESDINGQITILENAVAGAPAAVVIAPTE
FKALGKPVDEAAKSVPVIGIDSGADSKAFTSFLTTDNVQGGRIAADGLAAAIKEATGK
EEGEIAVITSLPGVGSLDQRREGFLDQVKTKYPGLKVVADKYADGQATTGLNIMTDLI
TANPNLVGVFASNLIMAQGVGQAIAENKLGDKIKVIGFDSDEKTVGFLKEGVLAGLVV
QDPYRMGYDGVKTALAVSKGEKVEANVDTGANLVTKANMSEPKIDALLNPKVN"
misc_feature 19526..20377
/locus_tag="SMc02774"
/note="D-ribose transporter subunit RbsB; Provisional;
Region: PRK10653"
/db_xref="CDD:170603"
misc_feature 19547..20377
/locus_tag="SMc02774"
/note="Periplasmic sugar-binding domain of uncharacterized
ABC-type transport systems; Region:
PBP1_ABC_sugar_binding_like_2; cd06310"
/db_xref="CDD:107305"
misc_feature order(19583..19585,19808..19810,19979..19981,20210..20212,
20270..20272)
/locus_tag="SMc02774"
/note="putative ligand binding site; other site"
/db_xref="CDD:107305"
gene 20543..22096
/locus_tag="SMc02773"
/db_xref="GeneID:1231646"
CDS 20543..22096
/locus_tag="SMc02773"
/function="cell processes; transport of small molecules;
carbohydrates, organic acids, alcohols"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology"
/codon_start=1
/transl_table=11
/product="putative ABC transporter ATP-binding protein"
/protein_id="NP_384127.1"
/db_xref="GI:15963774"
/db_xref="GeneID:1231646"
/translation="MIGLQEVSHRHDEQVRAAGGRPVPKGAPILELRSLQKNYGAVEA
LKPATMTFLSGEIHAIVGENGAGKSTLIKLLTGVIARSAGEIRWCGETVDLATPNEAI
ARGINAVHQEVVLCPHLSVAANMFLGDEMNRRGLMRKRAMTGAAQGVLDDLGFNLPAN
AELGSLTIGQQQLVATARAAMRGTQFLIFDEPTAYLTRQESAQLFRLIRRLQGEGVTI
VYISHRLEEVFELADRVSVLRDGTHVGTRAISETNEAELITLMINRTIEQIYHKERFE
QGEMIVETRGLSGPGFRDISLSVRAGEIVGLYGLIGAGRSEFALGLYGRNPVSAGEIF
WQGRKVAIGNERKAMDLGIALAPESRRDQGLCLNLPIGVNINLPVFKRLTRGLTINRA
QEASNAERQIRDLNIKTPSRRVLASAMSGGNQQKIVIGRWLSHGAKLFIFDEPTVGVD
VGTKAEIYRLFARLLEKGAGIILISSYLPEVYELADRLHVFRQGRLVASHDYRAASHE
EVLAQAINA"
misc_feature 20606..22087
/locus_tag="SMc02773"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:31325"
misc_feature 20630..21280
/locus_tag="SMc02773"
/note="This family represents the domain I of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and...;
Region: ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:72975"
misc_feature 20726..20749
/locus_tag="SMc02773"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72975"
misc_feature order(20735..20740,20744..20752,20873..20875,21110..21115,
21209..21211)
/locus_tag="SMc02773"
/note="ATP binding site; other site"
/db_xref="CDD:72975"
misc_feature 20864..20875
/locus_tag="SMc02773"
/note="Q-loop/lid; other site"
/db_xref="CDD:72975"
misc_feature order(20897..20905,21047..21067)
/locus_tag="SMc02773"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72975"
misc_feature 21098..21115
/locus_tag="SMc02773"
/note="Walker B; other site"
/db_xref="CDD:72975"
misc_feature 21122..21133
/locus_tag="SMc02773"
/note="D-loop; other site"
/db_xref="CDD:72975"
misc_feature 21197..21217
/locus_tag="SMc02773"
/note="H-loop/switch region; other site"
/db_xref="CDD:72975"
misc_feature 21374..22030
/locus_tag="SMc02773"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses...; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene 22130..23104
/locus_tag="SMc02772"
/db_xref="GeneID:1231647"
CDS 22130..23104
/locus_tag="SMc02772"
/function="cell processes; transport of small molecules;
carbohydrates, organic acids, alcohols"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative sugar ABC transporter permease protein"
/protein_id="NP_384128.1"
/db_xref="GI:15963775"
/db_xref="GeneID:1231647"
/translation="MSVETVESAGPTPKKGVSILFGLTLVGLLVVLWLLLGLATNAFW
TPNNISNLLRQGAMTAILAVGQTFVIITAGIDLSVGAVVGFTSVIVAWLLAAGVPLWL
AIIATLAIGVLIGAFHAFGIVRMGLPPFIITLATLTSLRGIGLLITNGSTISITNDAF
TTFSRADFLGIPSLFWMVIVVAIPAYVFLHLSRFGRYLFAVGSNSEAARLSGVNVNRT
IYLAYILSSTCAAFVGLLLASRIGIGNATQAEGWELQAIASSVIGGTSLFGAVGSVHG
PLLGAFILATINNGANLLNVNSFWQRIITGLLIIVIVYFDQLRRRGAR"
misc_feature 22298..23077
/locus_tag="SMc02772"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature 22745..22801
/locus_tag="SMc02772"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene 23151..24167
/locus_tag="SMc02771"
/db_xref="GeneID:1231648"
CDS 23151..24167
/locus_tag="SMc02771"
/EC_number="1.1.1.-"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative zinc-type alcohol dehydrogenase
protein"
/protein_id="NP_384129.1"
/db_xref="GI:15963776"
/db_xref="GeneID:1231648"
/translation="MKAVVCSEPGRLALVARSGPEAPPPGSVRLAVSRVGICGTDYHI
FEGKHPFLEYPRVMGHEISARVIEGGPGTRLAPGTLVVVNPYLSCGECIACRKGKPNC
CTAIRVLGVHTDGAFCEEIVMPEQNLYPAEGLSPEAAAAVEFLAIGAHAVRRSAAGRG
VRSLVIGAGPIGLGTAVFSRIAGHDVRLLDTSEERLAFATEKLGFSPGILAGDDAALA
QATGGDGFDVVFDATGNAQSMERAFGHVAHGGTLVFVSVVKEEIRFSDPEFHKREMTL
VASRNATREDFDHVIQSLAAGLVPIEALVTHRTTLEDLVRDLPRWVHDKSGLVKAVVA
VSAG"
misc_feature 23151..24149
/locus_tag="SMc02771"
/note="Threonine dehydrogenase and related Zn-dependent
dehydrogenases [Amino acid transport and metabolism /
General function prediction only]; Region: Tdh; COG1063"
/db_xref="CDD:31263"
misc_feature 23151..24149
/locus_tag="SMc02771"
/note="Alcohol dehydrogenases of the MDR family; Region:
Zn_ADH7; cd08261"
/db_xref="CDD:176222"
misc_feature order(23262..23270,23277..23279,23577..23579,23589..23591,
23649..23666,23718..23723,23733..23735,23781..23783,
23844..23849,23853..23855,23913..23918,23985..23993)
/locus_tag="SMc02771"
/note="putative NAD(P) binding site; other site"
/db_xref="CDD:176222"
misc_feature order(23262..23264,23328..23333,23577..23579)
/locus_tag="SMc02771"
/note="catalytic Zn binding site; other site"
/db_xref="CDD:176222"
misc_feature order(23415..23417,23424..23426,23433..23435,23457..23459)
/locus_tag="SMc02771"
/note="structural Zn binding site; other site"
/db_xref="CDD:176222"
gene 24435..25709
/locus_tag="SMc02770"
/db_xref="GeneID:1231649"
CDS 24435..25709
/locus_tag="SMc02770"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384130.1"
/db_xref="GI:15963777"
/db_xref="GeneID:1231649"
/translation="MFYQLYEMNHAMMAPWRTAADAMRLAFSNPMNPVSHTYFGRAAA
AGLEVFERATRRYGKPEFGLPETEIDGQPVPVRERIVWREPFCNLIHFERSLPRDRAP
DPKVLIVAPMSGHYATLLRGTVEALLPHSDVYITDWIDARMVPLSEGTFDLDDYIDYV
IQMLHFLGPDAHVIGVCQPAVPVLAAVALMEAAEDPLAPSTMTLMGGPIDTRINPTAV
NELAKERPIEWFRDNVVMPVPWPQPGFMRMVYPGFLQLSGFMSMNLDRHLIAHKEFFA
HLVKNDGDAAEKHRDFYDEYLAVMDLTAEFYLQTVQVVFMQHALPKGEMIHRGKRVDP
TAIRRVALLTVEGENDDISGLGQTKAAQTICTGIPDSMRQHYMQPDVGHYGVFNGSRF
RREIAPRIVAFQRRHSRHAKPVKQLIKGGKSA"
misc_feature 24438..25655
/locus_tag="SMc02770"
/note="polyhydroxyalkanoate depolymerase, intracellular;
Region: PHB_depoly_PhaZ; TIGR01849"
/db_xref="CDD:130908"
misc_feature 25050..25658
/locus_tag="SMc02770"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:175390"
gene 25859..26284
/locus_tag="SMc02769"
/db_xref="GeneID:1231650"
CDS 25859..26284
/locus_tag="SMc02769"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384131.1"
/db_xref="GI:15963778"
/db_xref="GeneID:1231650"
/translation="MNQSALIRPDWTPATIALMVLGFIVFWPLGLAMLAYILFGDKLR
AFKKDANEGVDRMCAGFKRNRRGQWAHHRTGNVAFDDWRTAELARLDEERRKLDEMRE
EFDGYVRELRRAKDQEEFDRFMRERKNGRTGPEAGFESS"
misc_feature 25871..26245
/locus_tag="SMc02769"
/note="Protein of unknown function (DUF2852); Region:
DUF2852; pfam11014"
/db_xref="CDD:151461"
gene 26383..27138
/locus_tag="SMc02768"
/db_xref="GeneID:1231651"
CDS 26383..27138
/locus_tag="SMc02768"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384132.1"
/db_xref="GI:15963779"
/db_xref="GeneID:1231651"
/translation="MFSSLKRRRGSGPPLDVIRDIEVAGKVLPLTIRQNARATRMTLR
IEPGGRALKLTVPEGLPEREVSAFLIRHQGWLMTKLARFSGESELEDGGTILVRGVAH
RIERTGRLRGLTEALVIDDEAVLRVGGAEEHLRRRIADYLKKEARSELERLVAVYAGR
TGRRARSLSLKDTRSRWGSCSAEGDLSFSWRIAMAPPKVIAYLAAHEVAHLQEMNHGP
RFWALCESLCPETKDAKHWLKRNGTMLHAIDFG"
misc_feature 26500..27105
/locus_tag="SMc02768"
/note="Protein of unknown function DUF45; Region: DUF45;
cl00636"
/db_xref="CDD:153902"
repeat_region 27199..27257
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
gene 27376..28023
/gene="trpF"
/locus_tag="SMc02767"
/db_xref="GeneID:1231652"
CDS 27376..28023
/gene="trpF"
/locus_tag="SMc02767"
/EC_number="5.3.1.24"
/function="small molecule metabolism; amino acid
biosynthesis; tryptophan"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of
1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate
from N-(5-phospho-beta-D-ribosyl)-anthranilate in
tryptophan biosynthesis"
/codon_start=1
/transl_table=11
/product="N-(5'-phosphoribosyl)anthranilate isomerase"
/protein_id="NP_384133.1"
/db_xref="GI:15963780"
/db_xref="GeneID:1231652"
/translation="MKTEVKICGLKTAEAVERAVALGASHVGFIFFPKSPRNIEPDDA
GRLAARARGRAKIVAVTVDADNDGLDEIVSALDPDVLQLHGSETPERVLSIKALYGLP
VMKALAVREASDLERIDPYLGIVDRFLLDAKPPAGSDLPGGNGISFDWRLLDALDGSV
DYMLSGGLNAGNIADALALTGARAIDTSSGVESAPGIKDLTLMEAFFEAVRRAEA"
misc_feature 27388..27984
/gene="trpF"
/locus_tag="SMc02767"
/note="Phosphoribosylanthranilate isomerase (PRAI)
catalyzes the fourth step of the tryptophan biosynthesis,
the conversion of N-(5'- phosphoribosyl)-anthranilate
(PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose
5-phosphate (CdRP). Most PRAIs are monomeric...; Region:
PRAI; cd00405"
/db_xref="CDD:73365"
misc_feature order(27391..27393,27397..27399,27463..27465,27619..27621,
27625..27627,27766..27768,27931..27933,27937..27942)
/gene="trpF"
/locus_tag="SMc02767"
/note="active site"
/db_xref="CDD:73365"
gene 28048..29268
/gene="trpB"
/locus_tag="SMc02766"
/db_xref="GeneID:1231653"
CDS 28048..29268
/gene="trpB"
/locus_tag="SMc02766"
/EC_number="4.2.1.20"
/function="small molecule metabolism; amino acid
biosynthesis; tryptophan"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of L-tryptophan from
L-serine and 1-(indol-3-yl)glycerol 3-phosphate"
/codon_start=1
/transl_table=11
/product="tryptophan synthase subunit beta"
/protein_id="NP_384134.1"
/db_xref="GI:15963781"
/db_xref="GeneID:1231653"
/translation="MNQPPKPNSFRSGPDEEGRFGIFGGRFVAETLMPLILDLQDEWA
RAKNDPAFKAELENLGTHYIGRPSPLYFAERLTAELGGAKIYFKREELNHTGSHKINN
CIGQILLAKRMGKTRIIAETGAGQHGVASATVAARFGLPCVVYMGATDVERQAPNVFR
MKLLGAEVKPVTAGNGTLKDAMNEALRDWVTNVDSTYYLIGTAAGPHPYPEMVRDFQA
VIGEEAKQQILEAEGRLPDLVVAAVGGGSNAIGIFHSFLDDEGVRIVGVEAGGKGLDG
DEHCASLTAGSPGVLHGNRTYLLQDGDGQIKEGHSISAGLDYPGIGPEHAWLNDIGRV
EYVPIMDHEALEAFQTLTRLEGIIPALEPSHALAEVIKRAPKMGKDEIILMNLSGRGD
KDIFTVGKILGMGQ"
misc_feature 28159..29241
/gene="trpB"
/locus_tag="SMc02766"
/note="Tryptophan synthase-beta: Trptophan synthase is a
bifunctional enzyme that catalyses the last two steps in
the biosynthesis of L-tryptophan via its alpha and beta
reactions. In the alpha reaction, indole 3-glycerol
phosphate is cleaved reversibly to...; Region:
Trp-synth_B; cd06446"
/db_xref="CDD:107207"
misc_feature 28237..29226
/gene="trpB"
/locus_tag="SMc02766"
/note="Cysteine synthase [Amino acid transport and
metabolism]; Region: CysK; COG0031"
/db_xref="CDD:30381"
misc_feature order(28339..28344,28423..28425,28651..28653,28777..28791,
29131..29133,29209..29211)
/gene="trpB"
/locus_tag="SMc02766"
/note="pyridoxal 5'-phosphate binding site; other site"
/db_xref="CDD:107207"
misc_feature 28342..28344
/gene="trpB"
/locus_tag="SMc02766"
/note="catalytic residue; other site"
/db_xref="CDD:107207"
gene 29274..30113
/gene="trpA"
/locus_tag="SMc02765"
/db_xref="GeneID:1231654"
CDS 29274..30113
/gene="trpA"
/locus_tag="SMc02765"
/EC_number="4.2.1.20"
/function="small molecule metabolism; amino acid
biosynthesis; tryptophan"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of indole and
glyceraldehyde 3-phosphate from indoleglycerol phosphate
in tryptophan biosynthesis"
/codon_start=1
/transl_table=11
/product="tryptophan synthase subunit alpha"
/protein_id="NP_384135.1"
/db_xref="GI:15963782"
/db_xref="GeneID:1231654"
/translation="MTARMEQRFADVAAEGRPVLVTYFMGGDPDFDTSLAIMKALRQA
GADIIELGVPFSDPMADGPAIQLAGQRALKAGQSLAKTLELARLFRAEDQRTPIVLMG
YYNPIYIYGVERFLADALEAGVDGLIVVDLPPEMDDELCIPALEKGISFIRLATPTTD
DRRLPKVLENTSGFVYYVSMTGITGSALPDPSLIAGAVARIKAHTPLPVCVGFGVKTA
DHARAIGASADGVVVGTAIVNQIASSLTEEGRATEATVPGVEALVRGLAAGVRAARLA
AAE"
misc_feature 29331..30026
/gene="trpA"
/locus_tag="SMc02765"
/note="Ttryptophan synthase (TRPS) alpha subunit (TSA).
TPRS is a bifunctional tetrameric enzyme (2 alpha and 2
beta subunits) that catalyzes the last two steps of
L-tryptophan biosynthesis. Alpha and beta subunit catalyze
two distinct reactions which are...; Region:
Tryptophan_synthase_alpha; cd04724"
/db_xref="CDD:73386"
misc_feature order(29421..29423,29454..29456,29466..29468,29799..29801,
29823..29828,29910..29915,29973..29978)
/gene="trpA"
/locus_tag="SMc02765"
/note="substrate binding site; other site"
/db_xref="CDD:73386"
misc_feature order(29421..29423,29454..29456,29580..29582,29823..29825)
/gene="trpA"
/locus_tag="SMc02765"
/note="active site"
/db_xref="CDD:73386"
misc_feature order(29421..29423,29454..29456,29580..29582)
/gene="trpA"
/locus_tag="SMc02765"
/note="catalytic residues; other site"
/db_xref="CDD:73386"
misc_feature order(29436..29447,29451..29453,29460..29462,29469..29474,
29586..29588,29595..29597,29661..29666,29670..29672,
29679..29681,29739..29741,29745..29753,29760..29762)
/gene="trpA"
/locus_tag="SMc02765"
/note="heterodimer interface; other site"
/db_xref="CDD:73386"
gene 30167..31081
/gene="accD"
/locus_tag="SMc02764"
/db_xref="GeneID:1231655"
CDS 30167..31081
/gene="accD"
/locus_tag="SMc02764"
/EC_number="6.4.1.2"
/function="small molecule metabolism; fatty acid
biosynthesis"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the carboxylation of acetyl-CoA to
malonyl-CoA; forms a tetramer of AccA2D2 subunits"
/codon_start=1
/transl_table=11
/product="acetyl-CoA carboxylase subunit beta"
/protein_id="NP_384136.1"
/db_xref="GI:15963783"
/db_xref="GeneID:1231655"
/translation="MNWITNYVRPKINSMLGRREVPENLWIKCPETGEMVFHRDLEEN
KWVIPQSGFHMKMPAKARLKDLFDGGIYEAFPQPKVAQDPLKFRDSKKYSDRLRDSRA
KTELEDTIVAGLGQVQGIKLVAVAHEFNFIGGSLGIAAGEAIVKAFERAIAEKCPLVM
FPASGGARMQEGILSLMQLPRTTVALNMLKEAGLPYIVVLTNPTTGGVTASYAMLGDI
HMAEPGAEIGFAGKRVIEQTLREKLPEGFQTSEYLLEHGMVDMVVKRHDIPETLARVL
NILMKKPAKAVKRDTATELAPLPVAASA"
misc_feature 30167..31021
/gene="accD"
/locus_tag="SMc02764"
/note="Acetyl co-enzyme A carboxylase carboxyltransferase
alpha subunit; Region: ACCA; cl00513"
/db_xref="CDD:174255"
misc_feature 30167..31018
/gene="accD"
/locus_tag="SMc02764"
/note="acetyl-CoA carboxylase subunit beta; Validated;
Region: PRK05654"
/db_xref="CDD:168155"
gene 31097..32440
/gene="folC"
/locus_tag="SMc02763"
/db_xref="GeneID:1231656"
CDS 31097..32440
/gene="folC"
/locus_tag="SMc02763"
/EC_number="6.3.2.12"
/EC_number="6.3.2.17"
/function="small molecule metabolism; biosynthesis of
cofactors, carriers; folic acid"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : probable;
Gene name confidence : probable;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="bifunctional folylpolyglutamate
synthase/dihydrofolate synthase"
/protein_id="NP_384137.1"
/db_xref="GI:15963784"
/db_xref="GeneID:1231656"
/translation="MTATEVSEAAQEIEKLLALHPKGFDLSLDRITRLLAALGNPHER
LPPVIHVAGTNGKGSVTAFCRAILEAAGLSVHVHTSPHLVNWHERYRLGVKGGKGALV
SDPVLADAVRRVAEANGGEKITVFEILTAVTFLLFAEHPADVAIIEVGLGGRYDATNV
IARPAVSVIMPISLDHQAYLGDRVELIAAEKAGIMKRGCPVVIGHQEEESARDVLIAT
AERLGCPISVYGQDFMAHEEFGRLIFQDENGLADLPLPRLPGRHQYANAAAAIRAVRA
AGFDVPEAAIEKGLAGVEWPGRLQRLAGGRLSHFGPPGAEIWIDGGHNPGAGHVIAEA
MATFEERDPRPLFLIIGMINTKEPIGYFKAFLDLTEQVFTVPVHGSDAGLDPLALAAD
AAAAGLEANATSSVAEALGQIAELTDEDPVPPRVLIGGSLYLVGDVLAENGTPPR"
misc_feature 31106..32437
/gene="folC"
/locus_tag="SMc02763"
/note="Folylpolyglutamate synthase [Coenzyme metabolism];
Region: FolC; COG0285"
/db_xref="CDD:30633"
misc_feature 31247..31888
/gene="folC"
/locus_tag="SMc02763"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:149357"
repeat_region 32440..32487
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region 32501..32545
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region complement(32577..32639)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region 32672..33972
/note="predicted by Homology"
/mobile_element="insertion sequence:ISRm22 OR SMc04470"
gene 32788..33951
/gene="TRm22"
/locus_tag="SMc02762"
/db_xref="GeneID:1231657"
CDS 32788..33951
/gene="TRm22"
/locus_tag="SMc02762"
/function="elements of external origin; transposon-related
functions"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : probable;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="NP_384138.1"
/db_xref="GI:15963785"
/db_xref="GeneID:1231657"
/translation="MRFTPSIFAQLLKAIDRRSFQAIVDRHAGDAYDKCFTSWDHLVA
LIYAQLSATTSLRGLEASFNANSQHHYHLGSGRLMRSTLSDANRRRPVAVFAETFALL
AGQLDRQTRREGTKMLRLIDSTPIPLGKLYDWAKSNGRIRGMKLHVVYDPKADCPGIL
DITDANVNDAQIGRTITIEKGATYVFDKGYCHYGWWTAIAEAGASFVTRPKTNMGLAL
VAERPVEQPQGDGFLVLEDSQVSLASKGDSKLPIGLRRVIVKRQDGDTITLLTNDLER
SAVEIGQLYKDRWQIELLFRWIKQHLKIRKFLGNNDNAIRLQIFAAMIAYALLRIAAR
LARVPLPILRFTDLVTQCLFQRKSIAEIHKPPQVNPSRPKPRTIPNQMVFRYA"
misc_feature 32926..33747
/gene="TRm22"
/locus_tag="SMc02762"
/note="FOG: Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3385"
/db_xref="CDD:33192"
misc_feature 33124..33747
/gene="TRm22"
/locus_tag="SMc02762"
/note="Transposase DDE domain; Region: Transposase_11;
pfam01609"
/db_xref="CDD:144990"
gene complement(34091..34414)
/gene="trxA"
/locus_tag="SMc02761"
/db_xref="GeneID:1231658"
CDS complement(34091..34414)
/gene="trxA"
/locus_tag="SMc02761"
/function="small molecule metabolism; biosynthesis of
cofactors, carriers; thioredoxin, glutaredoxin,
glutathione"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : probable;
Gene name confidence : probable;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="thioredoxin protein"
/protein_id="NP_384139.1"
/db_xref="GI:15963786"
/db_xref="GeneID:1231658"
/translation="MATVKVDTANFQKEVLNSAEPVVVDFWAEWCGPCKMIAPSLEEI
ATELAGKVKVVKLNIDENPELAAQYGVRSIPTLAMFKGGEVADIKVGAAPKTALSSWI
SNAVA"
misc_feature complement(34106..34378)
/gene="trxA"
/locus_tag="SMc02761"
/note="TRX family; composed of two groups: Group I, which
includes proteins that exclusively encode a TRX domain;
and Group II, which are composed of fusion proteins of TRX
and additional domains. Group I TRX is a small ancient
protein that alter the redox...; Region: TRX_family;
cd02947"
/db_xref="CDD:48496"
misc_feature complement(order(34313..34315,34322..34324))
/gene="trxA"
/locus_tag="SMc02761"
/note="catalytic residues; other site"
/db_xref="CDD:48496"
gene complement(34496..38065)
/locus_tag="SMc02760"
/db_xref="GeneID:1231659"
CDS complement(34496..38065)
/locus_tag="SMc02760"
/function="macromolecule metabolism; macromolecule
synthesis, modification; dna - replication, repair,
restr./modif."
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative ATP-dependent nuclease/helicase
protein"
/protein_id="NP_384140.1"
/db_xref="GI:15963787"
/db_xref="GeneID:1231659"
/translation="MRSDATGPEERSPEGWLDWTTQRQALASDPACSAWVSANAGSGK
THVLTQRVIRLLLAGCRPSAILCLTYTKAAASEMSNRVFEKLAEWATLDDTTLEKRIE
AIEGKRPPTAKIQEARRLFARALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVL
DDRAAAVLLADARRALLTATAAASDGELAEAFATVLDLADDTGLEKLLAAIVANRAPI
QAFLDHASGRGGMEAHLRAALGLEPGETAGTVMAAVWPLAGLNGPALDDYIDLGLRLG
GAKPSAIADGLRAVRAIDDAATRYSKLVELFFNGGGKPKAESAFLNAAMRRAAPQLEL
RVEEARSHMLACVDRLSIVQMYGATRAALVLAERLNRDYEALKKARSQLDFEDLIHRT
AALLARSDVGAWVHYKLDQGIDHILVDEAQDTSPAQWTIIQSLAADFFAGETARADDR
TIFAVGDEKQSIYSFQGARPERFSRESTLTERRVRAGNKHFSPIRLQLSFRSTVDVLS
AVDTVFANPGNARGLSARSEAIVHASNRIGQPGAVDLWDVIAPEPAASEEDWTAPFDA
TPERAPVNILARRIAAVLEDWIGRETVIEKGVRRAMRPGDVIVLVRKRDAFVNALTRA
LKRRGNIPVAGADRLVLTSHIAVQDLIALGRFVLLPEDDLSLAALLKSPLLDLGEEDV
FELAARRTEGESLWRRLRQAGAEETSRYHEAVRTLSRYSGLARELLPHDFYARVLGAD
GGRRAFLARLGSEVSDILDEFLTFALDHERNGLPGLQAFISTLEIEAPTVKREQDKER
DEVRVMTVHAAKGLEAPVVFLVDGGGEAFVRQQVSDLRFLEKAQVDHSTLTVPVWRAP
GSAPNSLIAADNERLKKLAEEEYRRLLYVGMTRAADRLIVCGYRGQRQNTDTWHSMVQ
GTLAQDLKGRGTPRLFRAGSEEWQGIAWREAHVPRDLPTSEGRSEESQRPTAGLPTAL
FTPPAAPRRLPRPLAPSGTTIAIDDPDAEAIVGSALFAGKSAPKFSMLRGAILHRLLQ
VLPSVDGPERLAAAERYLARSVPRWPEAERRALAGTVMDVLDHADLQPLFGEHSRAEV
SVMGTLKLGVREFAVSGRIDRLAVTGDMVTIADYKTNREIPETPEEIAPVYRNQLAIY
RELLKPLYPGKRFRCVLIFTEGPAIRVLPEPMLDRSLEELATK"
misc_feature complement(34544..38002)
/locus_tag="SMc02760"
/note="double-strand break repair helicase AddA,
alphaproteobacterial type; Region: addA_alphas; TIGR02784"
/db_xref="CDD:163018"
misc_feature complement(<37610..38002)
/locus_tag="SMc02760"
/note="UvrD/REP helicase; Region: UvrD-helicase; cl14126"
/db_xref="CDD:175496"
misc_feature complement(36083..>36955)
/locus_tag="SMc02760"
/note="UvrD/REP helicase; Region: UvrD-helicase; cl14126"
/db_xref="CDD:175496"
gene complement(38055..41234)
/locus_tag="SMc02759"
/db_xref="GeneID:1231660"
CDS complement(38055..41234)
/locus_tag="SMc02759"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384141.1"
/db_xref="GI:15963788"
/db_xref="GeneID:1231660"
/translation="MPGHPNVFTIPAGLPFLRTVAERLCNGELTPGFRYDPAQPLALA
GVTIFVPTRRSARVLRSEFVDLLGGRSAILPMIRALGETDDDSGFFDAEVPAILDLAP
PLSGTARLIELGRLILAWRNRLPQVVLDIHAESPLIAPASPADAIWLARNLAELIDAI
ETEELDWDALDGLDGGEHALWWQLTLAFLKIARTYWPERLAELKHSSPARHRNAVLKA
ETQRIAAGKVSGPIIIAGSTGSIPATAALIAAVKTLPNGTIVLPGLDGSMSDAEWRLI
AGETSGSGTSARNPASRTHPQYGFHRLLKRMGIELGDVPALASAADDLDYRSAVLSRA
LLPADATDVWMEARRSFDAERLLSAFADVALIEAANEREEATAIAIALRLALEADEES
QAALITPDRGLARRVGTELARFGIEADDSAGIPLSATPAGALARLLLEATLRPDDPVA
LVALLKHPLARFGRTADDARRAADVLELAALRGGTDAADVSALEAVLDKALDRQKTDR
HPPPWRAGIGPDDIAMARALARRIASAVGPLSSNLSADPQTGRHRSTVLPLSDWAERT
GRALEAAAIDEQGNLGALWASEAGEILATLLRGIIETDGQMEADGPQWCDILEALAAS
EAVKPRSMRHPRVFIFGALESRLQSVDLVVLGGMNEGTWPGQTSNDPFLSRTMKAGIG
LEPPERRIGQLAHDFQMACGTRRLILSRSMRQGSAPTVASRWLQRLQALGGERLTALL
KANGADYLHWMRILDQGERQPLSERPEPKPPAELQPRKYSFSEVTRLRRDPYAVYARR
ILRLEPIQPFNRDPGAAERGLLYHRIVDRFVKGGFDPAAREGEEAMIRLTDEAFDEEK
LPAHIDTIWRPRFQAVGRAFLEWERERRHGIVKSFTEVPAAMDLGIGDIRLTGIADRL
DRLADGTIDIIDYKTGSSPSPKEARALLDPQLALEAAALRAGAFRVIGPAQPHSLRYV
RLKPGSRFAVDTVNNEGAGSKETKSTGQLADESLAELRKLLSALMSGRFGFASRLIVQ
KQRDYGGEYDHLARVAEWATADGEDDDEE"
misc_feature complement(38937..41222)
/locus_tag="SMc02759"
/note="Inactivated superfamily I helicase [DNA
replication, recombination, and repair]; Region: COG3893"
/db_xref="CDD:33681"
misc_feature complement(38091..41216)
/locus_tag="SMc02759"
/note="double-strand break repair protein AddB,
alphaproteobacterial type; Region: addB_alphas; TIGR02786"
/db_xref="CDD:163020"
misc_feature complement(38067..38900)
/locus_tag="SMc02759"
/note="Domain of unknown function DUF83; Region: Cas_Cas4;
cl00641"
/db_xref="CDD:174324"
gene complement(41236..41967)
/locus_tag="SMc02758"
/db_xref="GeneID:1231661"
CDS complement(41236..41967)
/locus_tag="SMc02758"
/EC_number="2.7.7.-"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative nucleotidyl transferase protein"
/protein_id="NP_384142.1"
/db_xref="GI:15963789"
/db_xref="GeneID:1231661"
/translation="MPITNAMVLAAGLGTRLRPVTDTLPKPLVRIAGKPMIDYVLDLL
AAAGVTRAVVNVHHFAGQMEEHLGRREVPHILISDERDALMNSGGGLAKGLKLLDGGP
VLVMNADLFWIGEKPRQPCNLKKLAEFFDSERMDMALLCVRLEDTTGHNGKRDFSLSE
DGRLTRYEEGMENPVVYAGAIAMDAALLADAPDEAFNLNIYFDRAIARGRLFGLMLEG
HWITVGSPEAIAEAEAAIRRFRPEG"
misc_feature complement(41290..41955)
/locus_tag="SMc02758"
/note="NTP_transferase_like_1 is a member of the
nucleotidyl transferase family; Region:
NTP_transferase_like_1; cd06422"
/db_xref="CDD:133044"
misc_feature complement(order(41641..41643,41647..41649,41803..41805,
41935..41943))
/locus_tag="SMc02758"
/note="Substrate binding site; other site"
/db_xref="CDD:133044"
misc_feature complement(order(41296..41298,41302..41304,41641..41643))
/locus_tag="SMc02758"
/note="metal-binding site"
/db_xref="CDD:133044"
gene complement(41974..43488)
/locus_tag="SMc02757"
/db_xref="GeneID:1231662"
CDS complement(41974..43488)
/locus_tag="SMc02757"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384143.1"
/db_xref="GI:15963790"
/db_xref="GeneID:1231662"
/translation="MKSLERLLKDEAATIEFGEDLALALKAGECVALSGDLGAGKSTF
ARAFIRAMADDETLEVPSPTFTLVQSYDLRIPVAHFDLYRLADASELDELGFDEALAD
GICLVEWPEKAEEALPADRITLTFSHEDDGRRIHLTAPDAAFERITRSLAIRKFLIDA
AHPYARRRHLSGDASIRAYERIDTQDGAPAKILMDAPRHKPGPILQDGKYYQQLAHIA
EDVVPFVAISQLLRKRGFAAPAIYARDLDQGLLLIENLGSEGILDTDGRPVAERYIEG
ARLLARLHAQPAERDIAVAEGVVHSIPDFDRTAIRIETSLLVDWYLPWKRGRPASDDE
RREYFAVWDGLIDVLASAEKNLLLRDFHSPNILWRQDRAGFDRIGIIDFQDAMIGPTA
YDVASLVQDARVTIEPDLAKRMMTAYISERRELGPFDEATFRRDWHLMAAQRNCKLAG
IWVRLKERDGKPGYMKHMPRTFAYLEHALSHQVLTPLREWCIKAGILAPESANR"
misc_feature complement(43036..43479)
/locus_tag="SMc02757"
/note="Uncharacterized P-loop hydrolase UPF0079; Region:
UPF0079; cl00520"
/db_xref="CDD:174260"
misc_feature complement(41977..43026)
/locus_tag="SMc02757"
/note="Protein Kinases, catalytic domain; Region:
PKc_like; cl09925"
/db_xref="CDD:175044"
gene complement(43498..45978)
/locus_tag="SMc02756"
/db_xref="GeneID:1231663"
CDS complement(43498..45978)
/locus_tag="SMc02756"
/function="miscellaneous; not classified regulator"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative sensor histidine kinase protein"
/protein_id="NP_384144.1"
/db_xref="GI:15963791"
/db_xref="GeneID:1231663"
/translation="MKTHETMSSAGRLGAPRLIKRLLAGTVLLAASDAAAQATDPGRS
IFGTSEVVTFSVLIGVISAAMISAIWLIRQRGNIEAENRELRSNLSDANQRISRFQAL
IADKNRRIVIWDGLAERPEFLGQLPAETGAPQDDRDFLAFGRWIKPQSAGQLEKAIEA
LRAQAQSFDLVLETQRNEVLEAQGRVSGGRAFVRFIALNNLRAELAELKLERDQLHAS
LSTFRTLLDAVDLPAWQRGGDGRLQWVNAAYANAVETQSASTAVAEERELLATTARER
IRAVSTLQTPFRDKVSTVVRGNRTFFDVVDARTPAGSAGIAIDVSGIEAVREELARTL
KSHAETLEHLATPVAIFDGNQRLQFYNQAFQRLWDLDMGFLERKPDNGEVLDRLRAGG
KLPEQLNWKQWKTSALSVYQAIDTQSDLWHLPNGQTLRVFATARPQGGATWVFENLTE
RVDLETRYNTLVQVQGETIDHLAEGVAVFGPDGRIRLSNPAFRAIWGISETEAQPGTH
IRAIEQACLASYDQPDGWKRFAHIITSFDDERPSSRGILELRTGLILDYAVIPLPNAQ
TMLTFVNITDSVRVERALTEKNEALRKADALKNDFVHHVSYELRSPLTNIIGFADLLK
TPVFGELNERQAEYVDHIATSSSLLLTIVNDILDLATVDAGIVELELSEVNLIDLIDD
VTQQMGDRLVESGVSLRTDAPDNLGRITADQQRLKQIFIKLLTNAANFAPDGSTIELK
CWREGSDFAFSVTDTGPGIPQDVLNTVFNRFESYGQRGGAGLGLSIVESFVSLHHGNV
SIRSKEGEGTAVTCRIPSAEAPKVIAAE"
misc_feature complement(43537..44574)
/locus_tag="SMc02756"
/note="phosphate regulon sensor kinase PhoR; Region:
phoR_proteo; TIGR02966"
/db_xref="CDD:163090"
misc_feature complement(43999..44196)
/locus_tag="SMc02756"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via trans-...; Region: HisKA;
cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(44011..44013,44023..44025,44032..44034,
44044..44046,44053..44055,44065..44067,44122..44124,
44131..44133,44143..44145,44152..44154,44164..44166,
44176..44178))
/locus_tag="SMc02756"
/note="dimer interface; other site"
/db_xref="CDD:119399"
misc_feature complement(44158..44160)
/locus_tag="SMc02756"
/note="phosphorylation site"
/db_xref="CDD:119399"
misc_feature complement(43537..43833)
/locus_tag="SMc02756"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(43549..43551,43555..43560,43573..43575,
43579..43581,43627..43638,43702..43707,43711..43713,
43717..43719,43723..43725,43792..43794,43801..43803,
43813..43815))
/locus_tag="SMc02756"
/note="ATP binding site; other site"
/db_xref="CDD:28956"
misc_feature complement(43801..43803)
/locus_tag="SMc02756"
/note="Mg2+ binding site; other site"
/db_xref="CDD:28956"
misc_feature complement(order(43630..43632,43636..43638,43705..43707,
43711..43713))
/locus_tag="SMc02756"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(46280..47680)
/gene="ahcY"
/locus_tag="SMc02755"
/db_xref="GeneID:1231664"
CDS complement(46280..47680)
/gene="ahcY"
/locus_tag="SMc02755"
/EC_number="3.3.1.1"
/function="small molecule metabolism; central intermediary
metabolism; amino acids"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of L-homocysteine from
S-adenosyl-L-homocysteine"
/codon_start=1
/transl_table=11
/product="S-adenosyl-L-homocysteine hydrolase"
/protein_id="NP_384145.1"
/db_xref="GI:15963792"
/db_xref="GeneID:1231664"
/translation="MSATQDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKP
LKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAV
KGETLEEYWTYTDKIFQWADGGVSNMILDDGGDATMYILLGARAEAGENILTNPGSEE
EEILFAQIKKRLAATPGWFTRQRDAIKGVTEETTTGVNRLYQLQAKGLLPFPAINVND
SVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVK
VTEVDPICALQAAMDGYEVVQLEDVVSSADIFITTTGNKDVIRIEHMRAMKDMAIVGN
IGHFDNEIQVSALRNLKWTNVKPQVDLIEFPKGNRIILLSEGRLLNLGNATGHPSFVM
SASFSNQVLAQIELFTKGEQYKNEVYVLPKQLDEKVARLHLAKLGAKLTELSEEQASY
IGVKQQGPFKAEHYRY"
misc_feature complement(46301..47680)
/gene="ahcY"
/locus_tag="SMc02755"
/note="S-adenosyl-L-homocysteine hydrolase; Provisional;
Region: PRK05476"
/db_xref="CDD:168076"
misc_feature complement(46307..47647)
/gene="ahcY"
/locus_tag="SMc02755"
/note="S-adenosyl-L-homocysteine hydrolase (AdoHycase)
catalyzes the hydrolysis of S-adenosyl-L-homocysteine
(AdoHyc) to form adenosine (Ado) and homocysteine (Hcy).
The equilibrium lies far on the side of AdoHyc synthesis,
but in nature the removal of Ado...; Region: AdoHcyase;
cd00401"
/db_xref="CDD:29522"
misc_feature complement(order(46328..46333,46340..46345,46352..46354,
46358..46366,46370..46375,46382..46384,46424..46426,
46508..46510,46526..46528,46619..46621,46661..46663,
46694..46702,46733..46744,46793..46798,46805..46816,
46820..46846,46865..46870,46931..46945,46949..46951,
46958..46963,46982..46987,46994..46996,47006..47008,
47021..47023,47027..47029,47075..47080,47087..47089,
47597..47602,47621..47623))
/gene="ahcY"
/locus_tag="SMc02755"
/note="oligomerization interface; other site"
/db_xref="CDD:29522"
misc_feature complement(order(46520..46522,47003..47005,47015..47017,
47102..47107,47285..47287,47504..47506,47510..47512,
47516..47518))
/gene="ahcY"
/locus_tag="SMc02755"
/note="active site"
/db_xref="CDD:29522"
misc_feature complement(order(46520..46522,46541..46543,46547..46549,
46670..46678,46730..46732,46745..46750,46841..46849,
46901..46909,46913..46915,47000..47002,47096..47104))
/gene="ahcY"
/locus_tag="SMc02755"
/note="NAD+ binding site; other site"
/db_xref="CDD:29522"
gene complement(47837..48127)
/locus_tag="SMc02754"
/db_xref="GeneID:1231665"
CDS complement(47837..48127)
/locus_tag="SMc02754"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative phosphocarrier HPr transmembrane
protein"
/protein_id="NP_384146.1"
/db_xref="GI:15963793"
/db_xref="GeneID:1231665"
/translation="MDHRPDTALTRELLIVNKRGLHARASAKFVQTVETFDAEITVSK
DGMTVGGTSIMGLMMLAASTGCSVFVTASGAQAEEALNALDRLVRDRFGEEM"
misc_feature complement(47864..48094)
/locus_tag="SMc02754"
/note="Histidine-containing phosphocarrier protein
(HPr)-like proteins. HPr is a central component of the
bacterial phosphoenolpyruvate sugar phosphotransferase
system (PTS). The PTS catalyses the phosphorylation of
sugar substrates during their translocation...; Region:
PTS-HPr_like; cd00367"
/db_xref="CDD:29444"
misc_feature complement(48083..48094)
/locus_tag="SMc02754"
/note="dimerization domain swap beta strand; other site"
/db_xref="CDD:29444"
misc_feature complement(order(47951..47956,47963..47974,48026..48028,
48035..48037,48047..48052,48056..48061,48065..48067))
/locus_tag="SMc02754"
/note="regulatory protein interface; other site"
/db_xref="CDD:29444"
misc_feature complement(48062..48064)
/locus_tag="SMc02754"
/note="active site"
/db_xref="CDD:29444"
misc_feature complement(47969..47971)
/locus_tag="SMc02754"
/note="regulatory phosphorylation site; other site"
/db_xref="CDD:29444"
gene complement(48127..48528)
/locus_tag="SMc02753"
/db_xref="GeneID:1231666"
CDS complement(48127..48528)
/locus_tag="SMc02753"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative IIA component of PTS system protein"
/protein_id="NP_384147.1"
/db_xref="GI:15963794"
/db_xref="GeneID:1231666"
/translation="MIGLVLVTHGKLADEFRHALEHVVGPQKAIETVCIGPEDDMDQR
RQDILDAVEKANEGDGVIILTDMFGGTPSNLAISVMRGGSVEVIAGVNLPMLIKLAGV
RGESDMDKALVEASEAGRKYINVASRVLSGK"
misc_feature complement(48166..48525)
/locus_tag="SMc02753"
/note="PTS_IIA, PTS system, mannose/sorbose specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_man;
cd00006"
/db_xref="CDD:28890"
misc_feature complement(order(48226..48228,48316..48318,48424..48426,
48457..48462,48502..48504))
/locus_tag="SMc02753"
/note="active pocket/dimerization site"
/db_xref="CDD:28890"
misc_feature complement(order(48316..48318,48331..48333,48502..48504))
/locus_tag="SMc02753"
/note="active site"
/db_xref="CDD:28890"
misc_feature complement(48502..48504)
/locus_tag="SMc02753"
/note="phosphorylation site"
/db_xref="CDD:28890"
repeat_region 48696..48748
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region 48764..48808
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
gene complement(48809..49255)
/locus_tag="SMc02752"
/db_xref="GeneID:1231667"
CDS complement(48809..49255)
/locus_tag="SMc02752"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384148.1"
/db_xref="GI:15963795"
/db_xref="GeneID:1231667"
/translation="MNAPFVNVHGTAIVLGTTGLLITGPSGSGKSALALSCLSEVRHR
GRFAALVADDRVDLTLENGRIVARCPAAIRGLIEIRGSGIAEVDTVSACVLDWAIMPV
RAPFDPRLPPEEELQLEIGRNLPLLRLPVEGPLSPVDALAALLPQI"
misc_feature complement(48827..49246)
/locus_tag="SMc02752"
/note="HprK/P, the bifunctional histidine-containing
protein kinase/phosphatase, controls the phosphorylation
state of the phosphocarrier protein HPr and regulates the
utilization of carbon sources by gram-positive bacteria.
It catalyzes both the ATP...; Region: HprK_C; cd01918"
/db_xref="CDD:29833"
misc_feature complement(order(48830..48832,48839..48841,48872..48874,
48923..48931,48989..48991,49004..49012,49022..49024,
49040..49042,49085..49087,49091..49096,49139..49141,
49151..49153,49166..49168,49175..49180,49229..49231,
49235..49237))
/locus_tag="SMc02752"
/note="Hpr binding site; other site"
/db_xref="CDD:29833"
misc_feature complement(order(49016..49018,49022..49024,49094..49099,
49163..49171,49175..49177,49229..49231))
/locus_tag="SMc02752"
/note="active site"
/db_xref="CDD:29833"
misc_feature complement(order(48827..48829,48875..48877,48983..48991,
48998..49006,49010..49012,49028..49030,49040..49042,
49109..49111,49118..49120,49139..49141,49151..49153,
49157..49159))
/locus_tag="SMc02752"
/note="homohexamer subunit interaction site; other site"
/db_xref="CDD:29833"
gene complement(49252..51039)
/gene="chvG"
/locus_tag="SMc04446"
/gene_synonym="exoS"
/db_xref="GeneID:1231668"
CDS complement(49252..51039)
/gene="chvG"
/locus_tag="SMc04446"
/gene_synonym="exoS"
/EC_number="2.7.3.-"
/function="structural elements; cell exterior; surface
polysaccharides/antigens"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="histidine kinase sensory transmembrane protein"
/protein_id="NP_384149.1"
/db_xref="GI:15963796"
/db_xref="GeneID:1231668"
/translation="MVEVLQGDIEEAEGRASTLRGQRRWAHPFTLIRRLFGNAVFSSL
TRRIVFFNLVALVVLVGGIMYLNQFREGLIDARVESLLTQGEIIAGAISASASVDTNS
ITIDPEKLLELQAGESITPLPSDEDLEFPIIQERVAPVLRRLISPTRTRARLFDADAD
LLLDSRHLYSGGQVLRFDLPPVDPESPSLADEFGTWFNRLLQPGDLPLYKEPPGGNGS
IYPEVMNALTGVRGAVVRVTEKGELIVSVAVPVQRFRAVLGVLLLSTQAGDIDKIVHA
ERLAIIRVFGVAALVNVILSLLLSSTIANPLRRLSAAAIRVRRGGAKEREEIPDFSSR
QDEIGNLSVALREMTTALYDRIAAIENFAADVSHELKNPLTSLRSAVETLPLARNEES
KKRLMDVIQHDVRRLDRLISDISDASRLDAELARADAKKVDLEKLLGDLVEISRQIRG
SKKPVLLDFVVDRKDNPRASFIVSGYELRIGQIITNLIENARSFVPEQNGRIVVRLTR
SRLRCIVYVEDNGPGIQAEDIDRIFERFYTDRPEGEDFGQNSGLGLSISRQIAEAHGG
TLRAENIAGKDGRISGARFVLSLPAGPHP"
misc_feature complement(49270..>50460)
/gene="chvG"
/locus_tag="SMc04446"
/gene_synonym="exoS"
/note="proteobacterial dedicated sortase system histidine
kinase; Region: marine_sort_HK; TIGR03785"
/db_xref="CDD:163497"
misc_feature complement(49783..49974)
/gene="chvG"
/locus_tag="SMc04446"
/gene_synonym="exoS"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via trans-...; Region: HisKA;
cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(49798..49800,49810..49812,49819..49821,
49831..49833,49840..49842,49852..49854,49900..49902,
49909..49911,49921..49923,49930..49932,49942..49944,
49954..49956))
/gene="chvG"
/locus_tag="SMc04446"
/gene_synonym="exoS"
/note="dimer interface; other site"
/db_xref="CDD:119399"
misc_feature complement(49936..49938)
/gene="chvG"
/locus_tag="SMc04446"
/gene_synonym="exoS"
/note="phosphorylation site"
/db_xref="CDD:119399"
misc_feature complement(49273..49602)
/gene="chvG"
/locus_tag="SMc04446"
/gene_synonym="exoS"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(49285..49287,49291..49296,49324..49326,
49330..49332,49378..49389,49468..49473,49477..49479,
49483..49485,49489..49491,49561..49563,49570..49572,
49582..49584))
/gene="chvG"
/locus_tag="SMc04446"
/gene_synonym="exoS"
/note="ATP binding site; other site"
/db_xref="CDD:28956"
misc_feature complement(49570..49572)
/gene="chvG"
/locus_tag="SMc04446"
/gene_synonym="exoS"
/note="Mg2+ binding site; other site"
/db_xref="CDD:28956"
misc_feature complement(order(49381..49383,49387..49389,49471..49473,
49477..49479))
/gene="chvG"
/locus_tag="SMc04446"
/gene_synonym="exoS"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
repeat_region complement(51142..51190)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region complement(51193..51249)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region complement(51246..51294)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region complement(51301..51353)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
gene complement(51419..52141)
/gene="chvI"
/locus_tag="SMc02560"
/db_xref="GeneID:1231669"
CDS complement(51419..52141)
/gene="chvI"
/locus_tag="SMc02560"
/function="structural elements; cell exterior; surface
polysaccharides/antigens"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="transcriptional regulatory protein"
/protein_id="NP_384150.1"
/db_xref="GI:15963797"
/db_xref="GeneID:1231669"
/translation="MQTIALVDDDRNILTSVSIALEAEGYKVETYTDGASALEGLLAR
PPQLAIFDIKMPRMDGMELLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFITKP
FSQRLLVERVKAILRRAANREAAAGGTGPAKNADTPSRSLERGQLVMDQERHTCTWKN
ESVTLTVTEFLILHALAQRPGVVKSRDALMDAAYDEQVYVDDRTIDSHIKRLRKKFKM
VDNDFDMIETLYGVGYRFRETA"
misc_feature complement(51434..52138)
/gene="chvI"
/locus_tag="SMc02560"
/note="proteobacterial dedicated sortase system response
regulator; Region: marine_sort_RR; TIGR03787"
/db_xref="CDD:163499"
misc_feature complement(51803..52126)
/gene="chvI"
/locus_tag="SMc02560"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems...; Region: REC;
cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(51836..51841,51848..51850,51905..51907,
51962..51964,51986..51988,52115..52120))
/gene="chvI"
/locus_tag="SMc02560"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(51986..51988)
/gene="chvI"
/locus_tag="SMc02560"
/note="phosphorylation site"
/db_xref="CDD:29071"
misc_feature complement(order(51962..51970,51974..51979))
/gene="chvI"
/locus_tag="SMc02560"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(51833..51841)
/gene="chvI"
/locus_tag="SMc02560"
/note="dimerization interface; other site"
/db_xref="CDD:29071"
misc_feature complement(51434..51718)
/gene="chvI"
/locus_tag="SMc02560"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature complement(order(51443..51445,51458..51460,51494..51499,
51521..51523,51530..51532,51584..51589,51644..51646))
/gene="chvI"
/locus_tag="SMc02560"
/note="DNA binding site"
/db_xref="CDD:29475"
gene 52483..54093
/gene="pckA"
/locus_tag="SMc02562"
/db_xref="GeneID:1231670"
CDS 52483..54093
/gene="pckA"
/locus_tag="SMc02562"
/EC_number="4.1.1.49"
/function="small molecule metabolism; central intermediary
metabolism; gluconeogenesis"
/inference="non-experimental evidence, no additional
details recorded"
/note="PEP carboxykinase; PEP carboxylase; PEPCK;
catalyzes the phosphorylation and decarboxylation of
oxaloacetate to form phosphoenolpyruvate using ATP"
/codon_start=1
/transl_table=11
/product="phosphoenolpyruvate carboxykinase"
/protein_id="NP_384151.1"
/db_xref="GI:15963798"
/db_xref="GeneID:1231670"
/translation="MDELGSRNPSIGLESIGFSDLSVVRYNFEAAQLYEEALARGEAE
LTAHGALCARTGQHTGRSPKDKYVVRDANTADQIWWDNNSAISPEHFEVLRRDMLAHA
KGMSLYVQDLVGGADPENALPTRVVTEFAWHSLFIRNLLIRPEREALPSFQPKLTIID
LPSFKADPVRHGCRSETVIACDLTNGLVLIGGTSYAGEMKKSVFTVLNYLLPEKSVMP
MHCSANVGPAGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWSEKGVFNFEGGCYAK
AIRLSEAAEPEIFATTRRFGTVMENVVLDERRLPDFDDGSLTENTRCAYPLHFIPNAS
KTGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEAT
FSTCFGAPFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGGAFGTGSRMPIKVTRAL
LSAALDGSLNNASFRTDANFGFAVPVSVPGVEAGILDPRSTWADGVAYDTQARRLVDM
FIANFAKFERHVDGSVRDAAPGARVAAE"
misc_feature 52546..54063
/gene="pckA"
/locus_tag="SMc02562"
/note="Phosphoenolpyruvate carboxykinase (PEPCK), a
critical gluconeogenic enzyme, catalyzes the first
committed step in the diversion of tricarboxylic acid
cycle intermediates toward gluconeogenesis. It catalyzes
the reversible decarboxylation and...; Region: PEPCK_ATP;
cd00484"
/db_xref="CDD:29830"
misc_feature 52552..54075
/gene="pckA"
/locus_tag="SMc02562"
/note="phosphoenolpyruvate carboxykinase; Provisional;
Region: PRK09344"
/db_xref="CDD:169805"
misc_feature order(52663..52665,53065..53067,53071..53073,53080..53085,
53140..53142,53194..53214,53248..53253,53302..53304,
53308..53310,53335..53337,53446..53448,53803..53805,
53812..53814,53821..53823)
/gene="pckA"
/locus_tag="SMc02562"
/note="active site"
/db_xref="CDD:29830"
misc_feature order(52663..52665,53065..53067,53071..53073,53080..53085,
53302..53304,53446..53448)
/gene="pckA"
/locus_tag="SMc02562"
/note="substrate-binding site; other site"
/db_xref="CDD:29830"
misc_feature order(53083..53085,53140..53142,53209..53211,53248..53253,
53302..53304)
/gene="pckA"
/locus_tag="SMc02562"
/note="metal-binding site"
/db_xref="CDD:29830"
misc_feature order(53194..53214,53335..53337,53803..53805,53821..53823)
/gene="pckA"
/locus_tag="SMc02562"
/note="ATP binding site; other site"
/db_xref="CDD:29830"
gene 54197..54631
/locus_tag="SMc02563"
/db_xref="GeneID:1231671"
CDS 54197..54631
/locus_tag="SMc02563"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="peptidyl-tRNA hydrolase domain protein"
/protein_id="NP_384152.1"
/db_xref="GI:15963799"
/db_xref="GeneID:1231671"
/translation="MASEPLYINENIVIAGWELTEQFVLAGGPGGQNVNKVSTAVQLF
FDVQASPSLPERVKANALKLAGRRASKEGVLMIEANRFRSQERNREDARERLKELILK
AAEPPPPPRRKTKPTRGSIERRLKEKSGRSEVKKLRGRPAGD"
misc_feature 54209..54628
/locus_tag="SMc02563"
/note="RF-1 domain; Region: RF-1; cl02875"
/db_xref="CDD:174736"
gene 54717..55190
/locus_tag="SMc02564"
/db_xref="GeneID:1231672"
CDS 54717..55190
/locus_tag="SMc02564"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="LysM domain/BON superfamily protein"
/protein_id="NP_384153.1"
/db_xref="GI:15963800"
/db_xref="GeneID:1231672"
/translation="MGLFSFIKNAGKKLGIGGDDTPPDAASVEKELASHDLGTKDVKV
DVVDDKVVLKGVVRDQSTFEKAVVAVGNTLGISKVEASELKVADGAAAPAEAKAPVFH
TVKKEDNLWKIAEAHYGKGKGAKHTAIFEANKPMLTHPDKIYPGQVLRIPDLDAG"
misc_feature 54717..55175
/locus_tag="SMc02564"
/note="LysM domain/BON superfamily protein; Provisional;
Region: PRK11198"
/db_xref="CDD:171020"
misc_feature 55020..55172
/locus_tag="SMc02564"
/note="Lysin domain, found in a variety of enzymes
involved in bacterial cell wall degradation. This domain
may have a general peptidoglycan binding function; Region:
LysM; cl00107"
/db_xref="CDD:153515"
gene 55295..55915
/gene="alkB"
/locus_tag="SMc02566"
/db_xref="GeneID:1231673"
CDS 55295..55915
/gene="alkB"
/locus_tag="SMc02566"
/function="macromolecule metabolism; macromolecule
synthesis, modification; dna - replication, repair,
restr./modif."
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : probable;
Gene name confidence : probable;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="alkylated DNA repair protein"
/protein_id="NP_384154.1"
/db_xref="GI:15963801"
/db_xref="GeneID:1231673"
/translation="MPPMLVLPKGVRHIPGFLDRSRQEELVEAVRAVVAEAPLFAPAM
PKTGKPMSVRMTNCGALGWVTDRERGYRYQATHPVTGKPWPPIPGMLQDIWNAVAGSD
KSPEACLVNFYSAEARMGLHQDRDERDLETAVVSISLGDDCLFRVGGRTRGGQTVSFR
LESGDVVVLGGEGRLAFHGVDRIYPNTSTLLRSGGRLNLTLRRVNP"
misc_feature 55298..55891
/gene="alkB"
/locus_tag="SMc02566"
/note="2OG-Fe(II) oxygenase superfamily; Region:
2OG-FeII_Oxy; cl01206"
/db_xref="CDD:174580"
repeat_region 55961..56372
/inference="non-experimental evidence, no additional
details recorded"
/note="Sm-1 OR SMc04482;
REPEAT SM-1;
predicted by Homology"
repeat_region complement(56113..56160)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region 56219..56266
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
gene complement(56529..57524)
/gene="coaA"
/locus_tag="SMc02567"
/db_xref="GeneID:1231674"
CDS complement(56529..57524)
/gene="coaA"
/locus_tag="SMc02567"
/EC_number="2.7.1.33"
/function="small molecule metabolism; biosynthesis of
cofactors, carriers; pantothenate"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of
(R)-4'-phosphopantothenate in coenzyme A biosynthesis"
/codon_start=1
/transl_table=11
/product="pantothenate kinase"
/protein_id="NP_384155.1"
/db_xref="GI:15963802"
/db_xref="GeneID:1231674"
/translation="MSIAAKDIEPADIPGNLQGGEYSPYHVFSAEEWSRFRADTPLTL
TADEVQRLRSLNDPVDLDEVRRIYLSLSRLLSAHVEASQILFRQRTRFLSMSNETKTP
FVIGVAGSVAVGKSTTARILAELLARWPSSPKVDLVTTDGFLYPNAVLQRENLMDRKG
FPASYDIGALLRFLSAIKAGRPNVKAPTYSHLTYDVIPDQFQVIDRPDILIFEGINVL
QSRDLPADGKIVPMVSDFFDFSIYIDAEESLIHSWYVNRFMRLRETAFQSPQSFFHRY
ATISEDAARAIAEGLWHNINLKNLHQNILPTRPRADLILQKGPNHLTQTVALRKL"
misc_feature complement(56532..57464)
/gene="coaA"
/locus_tag="SMc02567"
/note="pantothenate kinase; Provisional; Region: PRK05439"
/db_xref="CDD:168048"
misc_feature complement(56541..57215)
/gene="coaA"
/locus_tag="SMc02567"
/note="Pantothenate kinase (PanK) catalyzes the
phosphorylation of pantothenic acid to form
4'-phosphopantothenic, which is the first of five steps in
coenzyme A (CoA) biosynthetic pathway. The reaction
carried out by this enzyme is a key regulatory point
in...; Region: PanK; cd02025"
/db_xref="CDD:30198"
misc_feature complement(order(56562..56564,56574..56576,56754..56756,
56766..56768,57171..57182,57189..57191))
/gene="coaA"
/locus_tag="SMc02567"
/note="ATP-binding site; other site"
/db_xref="CDD:30198"
misc_feature complement(order(56562..56564,56742..56744,56754..56756,
56952..56954,57165..57167,57177..57182))
/gene="coaA"
/locus_tag="SMc02567"
/note="CoA-binding site; other site"
/db_xref="CDD:30198"
misc_feature complement(order(56886..56888,57177..57179))
/gene="coaA"
/locus_tag="SMc02567"
/note="Mg2+-binding site; other site"
/db_xref="CDD:30198"
gene complement(57521..57844)
/gene="hisE"
/locus_tag="SMc02568"
/db_xref="GeneID:1231675"
CDS complement(57521..57844)
/gene="hisE"
/locus_tag="SMc02568"
/EC_number="3.6.1.31"
/function="small molecule metabolism; amino acid
biosynthesis; histidine"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of 1-(5-phosphoribosyl)-AMP
from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis"
/codon_start=1
/transl_table=11
/product="phosphoribosyl-ATP pyrophosphatase"
/protein_id="NP_384156.1"
/db_xref="GI:15963803"
/db_xref="GeneID:1231675"
/translation="MTDFTLSDLEKIVATRARAAPEESWTAKLVAAGQTKAAKKLGEE
AVETVIAAIGEDRKNLVDESADLLYHLMVVLNIAAVPLQDVMSELARRTSQSGLQEKA
NRQNP"
misc_feature complement(57524..57841)
/gene="hisE"
/locus_tag="SMc02568"
/note="Phosphoribosyl-ATP pyrophosphohydrolase; Region:
PRA-PH; cl00345"
/db_xref="CDD:174131"
gene complement(57909..58685)
/gene="hisF"
/locus_tag="SMc02569"
/db_xref="GeneID:1231676"
CDS complement(57909..58685)
/gene="hisF"
/locus_tag="SMc02569"
/function="small molecule metabolism; amino acid
biosynthesis; histidine"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the conversion of
5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-
1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine
to imidazole-glycerol phosphate,
5-aminoimidazol-4-carboxamideribonucleotide and glutamate;
the HisF subunit acts as a cyclase"
/codon_start=1
/transl_table=11
/product="imidazole glycerol phosphate synthase subunit
HisF"
/protein_id="NP_384157.1"
/db_xref="GI:15963804"
/db_xref="GeneID:1231676"
/translation="MTLKARVIPCLDVKDGRVVKGVNFVDLIDAGDPVEAARAYDAAG
ADELCFLDITASSDNRETIFDVVARTAEQCFMPLTVGGGVRQVADIRKLLLAGADKVS
INTAAVKNPEFVAEAADKFGDQCIVVAIDAKKVSAQGEADRWEIFTHGGRQPTGIDAI
EFARKVVDLGAGEILLTSMDRDGTKSGYDISLTRAIADAVRAPVIASGGVGTLDHMVE
GIRDGHATAVLAASIFHFGTYSIGEAKRHMAKHGIAMRLD"
misc_feature complement(57933..58670)
/gene="hisF"
/locus_tag="SMc02569"
/note="The cyclase subunit of imidazoleglycerol phosphate
synthase (HisF). Imidazole glycerol phosphate synthase
(IGPS) catalyzes the fifth step of histidine biosynthesis,
the formation of the imidazole ring. IGPS converts
N1-(5'-phosphoribulosyl)-formimino-5-; Region: HisF;
cd04731"
/db_xref="CDD:73393"
misc_feature complement(57966..58670)
/gene="hisF"
/locus_tag="SMc02569"
/note="Histidine biosynthesis protein; Region:
His_biosynth; pfam00977"
/db_xref="CDD:144535"
misc_feature complement(order(57990..57995,58059..58067,58137..58142,
58155..58157,58236..58238,58293..58295,58299..58301,
58371..58376,58437..58439,58533..58535,58626..58628))
/gene="hisF"
/locus_tag="SMc02569"
/note="substrate binding site; other site"
/db_xref="CDD:73393"
misc_feature complement(order(58008..58010,58083..58085,58167..58169,
58314..58316,58386..58391,58398..58400,58455..58457,
58461..58463,58470..58472,58482..58484,58548..58550,
58563..58565))
/gene="hisF"
/locus_tag="SMc02569"
/note="glutamase interaction surface; other site"
/db_xref="CDD:73393"
gene complement(58682..59425)
/gene="hisA"
/locus_tag="SMc02570"
/db_xref="GeneID:1231677"
CDS complement(58682..59425)
/gene="hisA"
/locus_tag="SMc02570"
/EC_number="5.3.1.16"
/function="small molecule metabolism; amino acid
biosynthesis; histidine"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of
5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-
(5-phosphoribosyl)imidazole-4-carboxamide from
1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide"
/codon_start=1
/transl_table=11
/product="1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase"
/protein_id="NP_384158.1"
/db_xref="GI:15963805"
/db_xref="GeneID:1231677"
/translation="MILFPAIDLKDGQCVRLKLGDMEQATVYNPDPAAQARAFEEQGF
EWLHVVDLNGAFAGETVNGAAVDAILKATKNPVQLGGGIRTLEHIENWLSRGLKRVIL
GTVAVRDPALVIEACRKFPGRVAVGIDAKGGKVAVEGWAEASELGVVELARKFEGAGV
AAIIYTDIDRDGILTGINWASTLELADAVSIPVIASGGLASMDDIRRMTEPDAQKLEG
AISGRALYDGRIDPKEALDLIREARKGKL"
misc_feature complement(58700..59425)
/gene="hisA"
/locus_tag="SMc02570"
/note="Phosphoribosylformimino-5-aminoimidazole
carboxamide ribonucleotide (ProFAR) isomerase [Amino acid
transport and metabolism]; Region: HisA; COG0106"
/db_xref="CDD:30455"
misc_feature complement(58718..59422)
/gene="hisA"
/locus_tag="SMc02570"
/note="HisA. Phosphoribosylformimino-5-aminoimidazole
carboxamide ribonucleotide (ProFAR) isomerase catalyzes
the fourth step in histidine biosynthesis, an
isomerisation of the aminoaldose moiety of ProFAR to the
aminoketose of PRFAR (N-(5'-phospho-D-1...; Region: HisA;
cd04732"
/db_xref="CDD:73394"
misc_feature complement(order(59039..59041,59282..59284,59402..59404))
/gene="hisA"
/locus_tag="SMc02570"
/note="catalytic residues; other site"
/db_xref="CDD:73394"
gene complement(59458..60108)
/gene="hisH"
/locus_tag="SMc02572"
/db_xref="GeneID:1231678"
CDS complement(59458..60108)
/gene="hisH"
/locus_tag="SMc02572"
/EC_number="2.4.2.-"
/function="small molecule metabolism; amino acid
biosynthesis; histidine"
/inference="non-experimental evidence, no additional
details recorded"
/note="with HisF IGPS catalyzes the conversion of
phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide
ribonucleotide phosphate and glutamine to
imidazole-glycerol phosphate,
5-aminoimidazol-4-carboxamide ribonucleotide, and
glutamate in histidine biosynthesis; the HisH subunit
provides the glutamine amidotransferase activity that
produces the ammonia necessary to HisF for the synthesis
of imidazole-glycerol phosphate and
5-aminoimidazol-4-carboxamide ribonucleotide"
/codon_start=1
/transl_table=11
/product="imidazole glycerol phosphate synthase subunit
HisH"
/protein_id="NP_384159.1"
/db_xref="GI:15963806"
/db_xref="GeneID:1231678"
/translation="MRVAIIDYGSGNLRSATKAFERAAREAGIAAEIDLTDRPERVAT
ADRIVLPGVGAYADCRRGLAVVEGMEEALTEAVEKTGRPFFGICVGMQLMSSRGLEKT
VTKGFGWIAGDVVGMTPEDPSLKIPQIGWNTLDLKRPHPLFDGIPTGENGLHAYFVHS
YHLAAERAEDVVAEAGYGGPVTAFVARDNKAGSQFHPEKSQALGLALISNFLRWKP"
misc_feature complement(59461..60108)
/gene="hisH"
/locus_tag="SMc02572"
/note="imidazole glycerol phosphate synthase subunit HisH;
Provisional; Region: hisH; PRK13146"
/db_xref="CDD:171874"
misc_feature complement(59473..60102)
/gene="hisH"
/locus_tag="SMc02572"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in imidazole glycerol phosphate synthase (IGPS);
Region: GATase1_IGP_Synthase; cd01748"
/db_xref="CDD:153219"
misc_feature complement(order(59515..59517,59521..59523,59839..59853,
59947..59970))
/gene="hisH"
/locus_tag="SMc02572"
/note="putative active site; other site"
/db_xref="CDD:153219"
misc_feature complement(59947..59970)
/gene="hisH"
/locus_tag="SMc02572"
/note="oxyanion strand; other site"
/db_xref="CDD:153219"
misc_feature complement(order(59515..59517,59521..59523,59845..59847))
/gene="hisH"
/locus_tag="SMc02572"
/note="catalytic triad; other site"
/db_xref="CDD:153219"
gene complement(60108..60581)
/locus_tag="SMc02573"
/db_xref="GeneID:1231679"
CDS complement(60108..60581)
/locus_tag="SMc02573"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384160.1"
/db_xref="GI:15963807"
/db_xref="GeneID:1231679"
/translation="MASYLIMTPPGAPADDERARFIADGFSWAAFFFPGPWLIVKRAW
LIGIFVSVLQFLLLLAATMPGGFSAALLIHLALGLIVSLEGPLLVARKLSARDWTFRS
VVPARDLETAEEIYYSNAEPSAREGHAAPMPADRSATGRPGAAAGLGFFESYGER"
misc_feature complement(<60387..60581)
/locus_tag="SMc02573"
/note="Protein of unknown function (DUF2628); Region:
DUF2628; pfam10947"
/db_xref="CDD:151394"
gene complement(60608..61216)
/gene="hisB"
/locus_tag="SMc02574"
/db_xref="GeneID:1231680"
CDS complement(60608..61216)
/gene="hisB"
/locus_tag="SMc02574"
/EC_number="4.2.1.19"
/function="small molecule metabolism; amino acid
biosynthesis; histidine"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the dehydration of
D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to
3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine
biosynthesis"
/codon_start=1
/transl_table=11
/product="imidazoleglycerol-phosphate dehydratase"
/protein_id="NP_384161.1"
/db_xref="GI:15963808"
/db_xref="GeneID:1231680"
/translation="MADVMPSRTGQVSRKTNETAISVSVNVDGTGVSKIATGVGFFDH
MLDQLSRHSLIDMEIKAEGDLHVDDHHTVEDTGIAIGQALAKALGDRRGITRYASIDL
AMDETMTRAAVDVSGRPFLVWNVTFTSPKIGTFDTELVREFFQALAQHAGITLHVQNI
YGANNHHVAETCFKSVARVLRTATEIDPRQAGRVPSTKGTLA"
misc_feature complement(60614..61189)
/gene="hisB"
/locus_tag="SMc02574"
/note="Imidazoleglycerol-phosphate dehydratase; Region:
IGPD; cd07914"
/db_xref="CDD:153419"
misc_feature complement(order(60707..60709,60716..60721,60791..60793,
60863..60865,60902..60907,60929..60931,60995..60997,
61004..61009,61061..61066,61073..61075,61085..61087,
61163..61165))
/gene="hisB"
/locus_tag="SMc02574"
/note="putative active site pocket; other site"
/db_xref="CDD:153419"
misc_feature complement(order(60716..60730,60791..60796,60803..60805,
60809..60811,60818..60832,61004..61009,61013..61021,
61085..61087,61094..61099))
/gene="hisB"
/locus_tag="SMc02574"
/note="4-fold oligomerization interface; other site"
/db_xref="CDD:153419"
misc_feature complement(order(60707..60709,60716..60721,60791..60793,
60995..60997,61004..61009,61085..61087))
/gene="hisB"
/locus_tag="SMc02574"
/note="metal binding residues; metal-binding site"
/db_xref="CDD:153419"
misc_feature complement(order(60656..60658,60674..60676,60683..60685,
60737..60739,60743..60745,60749..60751,60755..60757,
60857..60859,60863..60865,60875..60883,60893..60898,
60902..60910,60914..60922,60926..60928,60932..60934))
/gene="hisB"
/locus_tag="SMc02574"
/note="3-fold/trimer interface; other site"
/db_xref="CDD:153419"
gene 61537..62094
/gene="hslV"
/locus_tag="SMc02575"
/db_xref="GeneID:1231681"
CDS 61537..62094
/gene="hslV"
/locus_tag="SMc02575"
/function="macromolecule metabolism; macromolecule
degradation; degradation of proteins, peptides,
glycopeptides"
/inference="non-experimental evidence, no additional
details recorded"
/note="heat shock protein involved in degradation of
misfolded proteins"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease peptidase subunit"
/protein_id="NP_384162.1"
/db_xref="GI:15963809"
/db_xref="GeneID:1231681"
/translation="MSEHNPYGTMHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNAR
KVRRLSKGDVIAGFAGATADAFTLLERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRN
LEAMMLVADRTVTLAITGNGDVLEPEHGTIAIGSGGNYAFAAARALMDSDKSAEEIAR
RALEIAGDICVYTNHNVVVETLDAE"
misc_feature 61573..62082
/gene="hslV"
/locus_tag="SMc02575"
/note="Protease HslV and the ATPase/chaperone HslU are
part of an ATP-dependent proteolytic system that is the
prokaryotic homolog of the proteasome. HslV is a dimer of
hexamers (a dodecamer) that forms a central proteolytic
chamber with active sites on the...; Region:
protease_HslV; cd01913"
/db_xref="CDD:48442"
misc_feature order(61573..61575,61621..61623,61627..61629,61669..61671,
61942..61944)
/gene="hslV"
/locus_tag="SMc02575"
/note="active site"
/db_xref="CDD:48442"
misc_feature order(61642..61650,61819..61821,61900..61902,61912..61914,
61951..61956,61963..61965,61987..61989,62017..62019,
62029..62031,62038..62043,62047..62049)
/gene="hslV"
/locus_tag="SMc02575"
/note="HslU subunit interaction site; other site"
/db_xref="CDD:48442"
gene 62084..62605
/locus_tag="SMc02576"
/db_xref="GeneID:1231682"
CDS 62084..62605
/locus_tag="SMc02576"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="acetyltransferase"
/protein_id="NP_384163.1"
/db_xref="GI:15963810"
/db_xref="GeneID:1231682"
/translation="MRNEPAEVSFEPVAEGHLPMLLAWLSEPHVRQWWGDPDVELGLI
RDGCAKGEVDGFVFRVKGEPAGYIQSWVPSEYDEEPWAKDLSGDTPGVDIFIGPPEMT
GKGVAAMALRAFAARLFESGAARIVIDPDAGNRRAVRAYAKAGFVPFGEWIDESGRTH
LMELKRTEFERNR"
misc_feature 62084..62602
/locus_tag="SMc02576"
/note="Acetyltransferases, including N-acetylases of
ribosomal proteins [Translation, ribosomal structure and
biogenesis]; Region: RimL; COG1670"
/db_xref="CDD:31856"
misc_feature 62258..62524
/locus_tag="SMc02576"
/note="N-Acyltransferase superfamily: Various enyzmes that
characteristicly catalyze the transfer of an acyl group to
a substrate; Region: NAT_SF; cl00443"
/db_xref="CDD:176420"
gene 62602..63909
/gene="hslU"
/locus_tag="SMc02577"
/db_xref="GeneID:1231683"
CDS 62602..63909
/gene="hslU"
/locus_tag="SMc02577"
/function="cell processes; adaptation; adaptations,
atypical conditions"
/inference="non-experimental evidence, no additional
details recorded"
/note="heat shock protein involved in degradation of
misfolded proteins"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease ATP-binding subunit HslU"
/protein_id="NP_384164.1"
/db_xref="GI:15963811"
/db_xref="GeneID:1231683"
/translation="MSNFSPREIVSELDRYIIGQKDAKRAVAIALRNRWRRQQLDDEL
RDEVMPKNILMIGPTGVGKTEISRRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIVRD
LVEVGISLVREKRRAEVKAKAHQNAEERVLDALVGTTASPATRDSFRKKLRANELDDK
EIEVDVAEAGSPGGAFEIPGMPGANIGVLNLSEMFGKALGGRTKKVKTTVKDSYALLV
NDESDKLLDNEQIQREAVAAAENDGIVFLDEIDKIATREGGIGAGVSREGVQRDLLPL
VEGTTVATKYGPVKTDHILFIASGAFHVAKPSDLLPELQGRLPIRVELRALTKEDFRR
ILTETEASLIRQYKALLETEGVALDFTEDAIDALAEVAVQLNANVENIGARRLQTVME
RVLDDVSFNAPDRGGQGVTIDAEYVRRHVGDLAANTDLSRYIL"
misc_feature 62602..63906
/gene="hslU"
/locus_tag="SMc02577"
/note="ATP-dependent protease ATP-binding subunit HslU;
Provisional; Region: hslU; PRK05201"
/db_xref="CDD:167927"
misc_feature 62653..>62910
/gene="hslU"
/locus_tag="SMc02577"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes...; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 62770..62793
/gene="hslU"
/locus_tag="SMc02577"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature 62773..62796
/gene="hslU"
/locus_tag="SMc02577"
/note="ATP binding site; other site"
/db_xref="CDD:99707"
misc_feature <63268..63564
/gene="hslU"
/locus_tag="SMc02577"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop NTPase; cl09099"
/db_xref="CDD:158411"
misc_feature 63580..63846
/gene="hslU"
/locus_tag="SMc02577"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; pfam10431"
/db_xref="CDD:151009"
gene 64116..65066
/locus_tag="SMc02578"
/db_xref="GeneID:1231684"
CDS 64116..65066
/locus_tag="SMc02578"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384165.1"
/db_xref="GI:15963812"
/db_xref="GeneID:1231684"
/translation="MRLTACMLVIFTFCLAAGPSAASGILIVPQGNRHVEQPGVPGAS
VRRTKAGRTSFDAKYEKVRELLATDRSLVGKIKSVAGAYGIAPIHMVGAIVGEHTYNV
DAYDRLQSYYVKAAAYAGDSFQFGHEGESIAEFVERPEFAECAGKKGSYALWSCRERV
WDSQFRGHTVAGKSFPNNRFSAVFFQPFFAGQTFGLGQINPLTALMLTDMVSRVSGYE
RLDESNAAGVYEAIMDPDVSLAYMAASIRHSIDAYRTIAGMDISGNPGLTATLYNVGN
PDARAAALAAKNQGGEVHWPEENYYGWLVNDKLAELESLL"
misc_feature 64155..65063
/locus_tag="SMc02578"
/note="Protein of unknown function (DUF1402); Region:
DUF1402; pfam07182"
/db_xref="CDD:148658"
repeat_region 65157..65204
/inference="non-experimental evidence, no additional
details recorded"
/note="Sm-5 OR SMc04650;
REPEAT SM-5;
predicted by Homology"
gene 65218..66618
/locus_tag="SMc02579"
/db_xref="GeneID:1231685"
CDS 65218..66618
/locus_tag="SMc02579"
/EC_number="1.14.-.-"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative cytochrome P450 monooxygenase protein"
/protein_id="NP_384166.1"
/db_xref="GI:15963813"
/db_xref="GeneID:1231685"
/translation="MDTRPEPFEPPAPVPRTGIPSRLEIIRTVLRNPLELWGEPSYTL
PWIETKFINQRTLIVNDPGLIRYILVENAANYEMSNVRRLILRPILRDGLLTAEGEVW
KRSRKAMAPVFTPRHAQGFAGQMLRVCEAFVDRYAGASSEPFVTNVAVDMTELTFEIL
AETLFSGEIAVEKQGFAANVEELLHRMGRVDPMDLLVAPSWVPRLTRIGGRKVLDRFR
GVVSETMSLRRRRTTEAPGDVPNDFLTLLLQLEGPDGLSTSEIEDNILTFIGAGHETT
ARALAWCFYCVANTPAYRETMEQEIDSVLASGADPVDWLGRMPHVLAAFEEALRLYPP
APSINRAAIEEDAWTSPEGERVPIRKGISVLVMPWTLHRHALYWQKPRAFMPERFLPE
NRDKINRFQYLPFGAGPRVCIGATFALQEAVIALAVLMHRFRFDLTDETHPWPVQRLT
TQPRGGLPMKVSARVK"
misc_feature 65263..66609
/locus_tag="SMc02579"
/note="Cytochrome P450; Region: p450; cl12078"
/db_xref="CDD:175399"
gene 66749..68755
/locus_tag="SMc02580"
/db_xref="GeneID:1231686"
CDS 66749..68755
/locus_tag="SMc02580"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384167.1"
/db_xref="GI:15963814"
/db_xref="GeneID:1231686"
/translation="MTPHLLLGIDTGGTYTDAVLFSEATGVVAKAKALTTRHDLAEGV
SGAVETVLAKARVPVSAISLVSLSTTLATNALVEGQGGRAGLIMIGFGPEDLKRDGLQ
EALGSDPVLFLPGGHNVHGGETPLDMSALDETLPDLSSQVSSFAIAGYFAVRNPDHEK
RVRDRIREVSHLPVTCSHELSSKLGGPRRALTTLLNARLVSMIDRLIGSCEDFLKARG
IDVPMMVVRGDGALISAAEARLRPIETILSGPAASLVGARYLTGLDNAIVSDIGGTTT
DVAVLEKGRPRLDAEGAVVGGFRTMVEAVAMRTYGLGGDSEVKINDRGLKARLDLGPR
RFLPLSLAAALHGDAVLSVLEKQLRAPHAGRHDGRLAVRTGLPDHLASGLQPQEQALY
GRIGMAPVALADLLVSTPQKATLDRLVARGLVHICGLTPSDAMHVLGRQAQWNGEAAR
LGLEIAARTKDGSGQPIAASVEALAQMIVDRLTRQSSEAILQACLSEDSAAIDPTASL
AVDRALKREPGIVRFSISLDRPLVGLGASAPVYYPAIAEMLSTEAAIPEEADVANAVG
AVVGQVRATVTVFVTTPEEGIFIVNGAGASERFVDQQEAFGVARRRAETMALESARTN
GAEEPAAVLREEIDAPEVEGSRKLIEARFIASASGRPRIAHHAF"
misc_feature 66767..67252
/locus_tag="SMc02580"
/note="Hydantoinase/oxoprolinase N-terminal region;
Region: Hydant_A_N; pfam05378"
/db_xref="CDD:147519"
misc_feature 67349..68071
/locus_tag="SMc02580"
/note="Hydantoinase/oxoprolinase; Region: Hydantoinase_A;
cl00668"
/db_xref="CDD:163895"
gene 68916..71087
/gene="glcB"
/locus_tag="SMc02581"
/db_xref="GeneID:1231687"
CDS 68916..71087
/gene="glcB"
/locus_tag="SMc02581"
/EC_number="2.3.3.9"
/function="small molecule metabolism; central intermediary
metabolism; glyoxylate bypass"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of malate from glyoxylate
and acetyl-CoA"
/codon_start=1
/transl_table=11
/product="malate synthase G"
/protein_id="NP_384168.1"
/db_xref="GI:15963815"
/db_xref="GeneID:1231687"
/translation="MDRVEKYGLQIDAGLHRFLVEEAMPGTGVDADRFFSAFSDLVHD
LGPKNRALLVKRDELQARLDGWYREHGAPVDMEAYEAFLREIGYLLPEGPDFYVSTAN
VDSEIATIAGPQLVVPVMNARYALNAANARWGSLYDALYGTDAIAETDGAERGKGYNP
KRGAKVIAWAREFLDASAPLAAGRWSDAKSFSVEGATLTVTLADGTKSAPRNSVQFAG
YAGDPAAPSEIVLRRNGLHIVIVLDATTPIGKADAAGISDVVLESAITTIMDCEDSIA
AVDAEDKVLVYRNWLGLMKGDLEEEVTKGGRAFTRRLNPDRAYTAPDGATLTLPGRSL
MLVRNVGHLMTNPAVLDRDGEEVPEGLMDAMVTALIALHDIGRNGRRANSRSGSMYVV
KPKMHGPEEVAFACEIFARVEAALGLPANAMKMGIMDEERRTTVNLKECIRAARERVV
FINTGFLDRTGDEIHTSMEAGPMIRKGDMKQAPWISAYENWNVDVGLECGLSGHAQIG
KGMWAMPDLMAAMLEQKIVHPKAGANTAWVPSPTAATLHATHYHRVNVAEVQASLKSR
TRAKLADILSVPVAARPNWTEEEIQRELDNNAQGILGYVVRWVDQGVGCSKVPDINNV
GLMEDRATLRISAQHMANWLHHGIVSEAQIVETMQRMAAIVDGQNAGDPNYQPMAGRF
EESIAFQAALDLVLKGREQPNGYTEPVLHRRRLELKAKQGA"
misc_feature 68937..71069
/gene="glcB"
/locus_tag="SMc02581"
/note="Malate synthase G (MSG), monomeric enzyme present
in some bacteria. In general, malate synthase catalyzes
the Claisen condensation of glyoxylate and acetyl-CoA to
malyl-CoA , which hydrolyzes to malate and CoA. This
reaction is part of the glyoxylate...; Region:
malate_synt_G; cd00728"
/db_xref="CDD:48434"
misc_feature order(69927..69929,70203..70205,70281..70283,70287..70289,
70800..70802)
/gene="glcB"
/locus_tag="SMc02581"
/note="active site"
/db_xref="CDD:48434"
repeat_region 71085..71143
/inference="non-experimental evidence, no additional
details recorded"
/note="Sm-4 OR SMc04585;
REPEAT SM-4;
predicted by Homology"
gene complement(71294..72130)
/locus_tag="SMc02582"
/db_xref="GeneID:1231688"
CDS complement(71294..72130)
/locus_tag="SMc02582"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384169.1"
/db_xref="GI:15963816"
/db_xref="GeneID:1231688"
/translation="MVCCKKAIVTEFTPFGHIAGGRSLAHCGAIENKLVPLTAGHPPP
YFPDLFYETIMRFRNALLLCSLAATVALAGCSQTTTTAGSSPEGEKVATNQIFSSNYG
PVEDHGYAVPGVPINRVDQRFHRQIVDYPTKERPGTIVVNTPSRFLYYVLPGGKAVRY
GIGVGKQGFAWEGEAYVAWKQEWPTWHPPKEMAERKPEVARYVEAGMGPGISNPLGAR
ALYLFNKEGRDTLFRLHGTPEWSSIGTAASSGCIRLMNQDIMDLYSRVRPGRNARVVV
QQ"
misc_feature complement(71297..71968)
/locus_tag="SMc02582"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: ErfK; COG1376"
/db_xref="CDD:31566"
misc_feature complement(71303..71725)
/locus_tag="SMc02582"
/note="L,D-transpeptidase catalytic domain; Region: YkuD;
pfam03734"
/db_xref="CDD:146395"
gene 72194..72718
/locus_tag="SMc02583"
/db_xref="GeneID:1231689"
CDS 72194..72718
/locus_tag="SMc02583"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384170.1"
/db_xref="GI:15963817"
/db_xref="GeneID:1231689"
/translation="MTILSIHGDNPLADGRQSERAMKVRRGVQRLLMELRHAALPELT
LASGRRADLISLSPKGEIWIIEIKTSIEDFRVDRKWPEYRLHCDRLFFATHAQVPLDI
FPEECGLMLSDGYGAHMLREASEHRLPPSTRKSVTQAFARTAAQRLTLAEWAAERNGE
LGQSISDIVSGERD"
misc_feature 72194..72667
/locus_tag="SMc02583"
/note="Protein of unknown function (DUF1052); Region:
DUF1052; cl02197"
/db_xref="CDD:121163"
gene complement(72733..73317)
/gene="actR"
/locus_tag="SMc02584"
/db_xref="GeneID:1231690"
CDS complement(72733..73317)
/gene="actR"
/locus_tag="SMc02584"
/function="small molecule metabolism; global functions;
global regulatory functions"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="transcription regulator protein"
/protein_id="NP_384171.1"
/db_xref="GI:15963818"
/db_xref="GeneID:1231690"
/translation="MIEKSMPAQNTHAADADLIGPDKSLLIVDDDTAFLRRLARAMEA
RGFAVEIAESVAEGIAKAKTRPPKHAVIDLRLSDGSGLDVIEAIRGRRDDTRMIVLTG
YGNIATAVNAVKLGALDYLAKPADADDILAALIQRPGERVEPPENPMSADRVRWEHIQ
RVYEMCERNVSETARRLNMHRRTLQRILAKRAPK"
misc_feature complement(72736..73275)
/gene="actR"
/locus_tag="SMc02584"
/note="Response regulator consisting of a CheY-like
receiver domain and a Fis-type HTH domain [Signal
transduction mechanisms / Transcription]; Region: COG4567"
/db_xref="CDD:34205"
misc_feature complement(72946..73242)
/gene="actR"
/locus_tag="SMc02584"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems...; Region: REC;
cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(72946..72951,72958..72960,73015..73017,
73075..73077,73099..73101,73228..73233))
/gene="actR"
/locus_tag="SMc02584"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(73099..73101)
/gene="actR"
/locus_tag="SMc02584"
/note="phosphorylation site"
/db_xref="CDD:29071"
misc_feature complement(order(73075..73083,73087..73092))
/gene="actR"
/locus_tag="SMc02584"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(72946..72951)
/gene="actR"
/locus_tag="SMc02584"
/note="dimerization interface; other site"
/db_xref="CDD:29071"
gene complement(73504..74805)
/gene="actS"
/locus_tag="SMc02585"
/db_xref="GeneID:1231691"
CDS complement(73504..74805)
/gene="actS"
/locus_tag="SMc02585"
/function="small molecule metabolism; global functions;
global regulatory functions"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="sensor histidine kinase transmembrane protein"
/protein_id="NP_384172.1"
/db_xref="GI:15963819"
/db_xref="GeneID:1231691"
/translation="MAAATLYNDLNSNRSLRLQTLVRLRWLAVGGQSLAVIVTALWLQ
FPLPVVPCSVLIACLALLNVFLTLRFPPTQRLTPPAAFTLLGIDLAQLTALLFITGGL
ANPFAPLLCVPVIISSASQPKPQSIVLAGLAVLGVTALAFSPFPLPWYPGTLLLMPRV
LTAGIWFAIVSMTAFAAFYTYRVSLEASELSEALTATELVLQREKHLSQLDGLAAAAA
HELGTPLATISVVAKEMERELGDDPRFGEDVHLLRSQSERCRDILRRLTTLSSESEEH
MRLLPLSSLIEEVMAPHREFGIEIELKEQGDRASEPVGIRNAGILYGLGNLLENAVDY
ARKKVTVTTEHTAERVRVTIEDDGDGFSPDILARIGEPYVTRRQKDDSAGGLGLGLFI
AKTLLERSGARLRFENGGSKHPGARVSVEWPRVLMDTKLAK"
misc_feature complement(73996..74187)
/gene="actS"
/locus_tag="SMc02585"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via trans...; Region: HisKA;
cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(74008..74010,74020..74022,74029..74031,
74041..74043,74050..74052,74062..74064,74113..74115,
74122..74124,74134..74136,74143..74145,74155..74157,
74167..74169))
/gene="actS"
/locus_tag="SMc02585"
/note="dimer interface; other site"
/db_xref="CDD:119399"
misc_feature complement(74149..74151)
/gene="actS"
/locus_tag="SMc02585"
/note="phosphorylation site"
/db_xref="CDD:119399"
misc_feature complement(73540..73836)
/gene="actS"
/locus_tag="SMc02585"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(73552..73554,73558..73563,73582..73584,
73588..73590,73636..73647,73723..73728,73732..73734,
73738..73740,73744..73746,73807..73809,73816..73818,
73828..73830))
/gene="actS"
/locus_tag="SMc02585"
/note="ATP binding site; other site"
/db_xref="CDD:28956"
misc_feature complement(73816..73818)
/gene="actS"
/locus_tag="SMc02585"
/note="Mg2+ binding site; other site"
/db_xref="CDD:28956"
misc_feature complement(order(73639..73641,73645..73647,73726..73728,
73732..73734))
/gene="actS"
/locus_tag="SMc02585"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(74986..77448)
/gene="helO"
/locus_tag="SMc02586"
/db_xref="GeneID:1231692"
CDS complement(74986..77448)
/gene="helO"
/locus_tag="SMc02586"
/function="macromolecule metabolism; macromolecule
synthesis, modification; dna - replication, repair,
restr./modif."
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="ATP-dependent helicase protein"
/protein_id="NP_384173.1"
/db_xref="GI:15963820"
/db_xref="GeneID:1231692"
/translation="MRALPALPIREILPGLGDALASAGSVVLSAPPGAGKTTLVPLFL
LDQPWRGDGKIILLEPRRLAARAAAGRMAELLGEKVGETVGYRMRLDNRVSGKTRIEV
VTEGVFSRMILDDPELSGVSAVLFDEFHERSLDADFGLALALDVQSALREDLRIVVMS
ATLDVERIAGLVGDAPVLKSEGRSFPIDIRYENRAAGESVEDAMVRTIAEAHRSEKGS
ILAFLPGQAEIARTAARLADRFGEATAIVPLYGNLSQKEQDAAIRPAPKGTRKIVLAT
SIAETSITIDGVRIVVDSGLQRLPVFEASTGITRLETVRVSRASADQRAGRAGRTEPG
IAIRLWHSGQTAALAAFTPPQILASDLSGLLLDLAHWGVADPSTLRFLDPPPETTLRE
ARGLLLELGAIDSRGALTPRGRRIRDLALPVRLAAMAVAAAEEGRAQEACLLAVMLTE
QGLGGNGIDIEERLRRFRSERSDRAKAARGLARRMAAELGASKNAGPKPVLPGALLMH
AFPDRIALQRGGRGRFVMANGRGAEIPETERLAAAGMLVIADLTGRAGAQRVLAAAEI
DRSDVEGHMPEAIVTEEQSFFDRASRQVRARRVTRLGAIIFEEKPLPRPSGEAAARAL
ADGIRQLGLAAVPFPKDVEQLRDRIGFLHRSIGEPWPDMSDTGLISRLDEWFVPFQGG
AGGIDGIKGRDLAEGLMSLVPYELQRDLARLAPTHFEAPTGQRHPIHYDGDEPLLSIR
VQELFGLKTHPAIGDGRLPLLLELISPGHRPIQTTRDLPGFWAGSWKDVRAEMRGRYP
KHPWPEDPANAMPTTRAKPRGT"
misc_feature complement(74992..77430)
/gene="helO"
/locus_tag="SMc02586"
/note="ATP-dependent helicase HrpB; Region: DEAH_box_HrpB;
TIGR01970"
/db_xref="CDD:162630"
misc_feature complement(76960..77358)
/gene="helO"
/locus_tag="SMc02586"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature complement(77338..77352)
/gene="helO"
/locus_tag="SMc02586"
/note="ATP binding site; other site"
/db_xref="CDD:28927"
misc_feature complement(77059..77070)
/gene="helO"
/locus_tag="SMc02586"
/note="putative Mg++ binding site; other site"
/db_xref="CDD:28927"
misc_feature complement(76432..76893)
/gene="helO"
/locus_tag="SMc02586"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature complement(order(76615..76623,76696..76701,76768..76779))
/gene="helO"
/locus_tag="SMc02586"
/note="nucleotide binding region; other site"
/db_xref="CDD:28960"
misc_feature complement(order(76459..76461,76468..76470,76480..76482,
76597..76599))
/gene="helO"
/locus_tag="SMc02586"
/note="ATP-binding site; other site"
/db_xref="CDD:28960"
misc_feature complement(75031..75426)
/gene="helO"
/locus_tag="SMc02586"
/note="ATP-dependent helicase C-terminal; Region: HrpB_C;
pfam08482"
/db_xref="CDD:149509"
gene complement(77448..78131)
/locus_tag="SMc02587"
/db_xref="GeneID:1231693"
CDS complement(77448..78131)
/locus_tag="SMc02587"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_384174.1"
/db_xref="GI:15963821"
/db_xref="GeneID:1231693"
/translation="MQENAGSKSPIKTGCLTLSEVTIGLGGRALLAISATIAPGEVLT
IMGPSGSGKSTLLAFAGGFLDPAFDVSGRILIDGKDLTAVPANRRHAGILFQDPLLFP
HLSVGGNIVFAIAPDVKGRGARRRLADAALDEVGLAGFFDRDPDTLSGGQKARVALQR
VLVSAPRFLLLDEPFSNLDAALRQQTRELVFSKARAAGLPTILVTHDSADAEAAGGRV
IEIGMEEQA"
misc_feature complement(77451..78092)
/locus_tag="SMc02587"
/note="ABC-type uncharacterized transport system, ATPase
component [General function prediction only]; Region:
COG4136"
/db_xref="CDD:33892"
misc_feature complement(77475..78086)
/locus_tag="SMc02587"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop NTPase; cl09099"
/db_xref="CDD:158411"
misc_feature complement(77970..77993)
/locus_tag="SMc02587"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(77514..77516,77613..77618,77844..77846,
77967..77975,77979..77984))
/locus_tag="SMc02587"
/note="ATP binding site; other site"
/db_xref="CDD:72971"
misc_feature complement(77844..77855)
/locus_tag="SMc02587"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(77661..77690)
/locus_tag="SMc02587"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(77613..77630)
/locus_tag="SMc02587"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(77595..77606)
/locus_tag="SMc02587"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(77508..77528)
/locus_tag="SMc02587"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene complement(78132..79820)
/locus_tag="SMc02588"
/db_xref="GeneID:1231694"
CDS complement(78132..79820)
/locus_tag="SMc02588"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="NP_384175.1"
/db_xref="GI:15963822"
/db_xref="GeneID:1231694"
/translation="MAQPTRLGGNALLALILGLPILAGLAGTILPAFGYLPALGGFRV
TLAHFAELAGQPHILRSVLTGLAAGLLTTVAATAVVGTFVAGFAGTPTFARIQHLVSP
LLAVPHAAAAFALAFLVAPSGFLLRLISPEVTGFTRPPDWLLPNDPFALTMIAGLIAK
EVPFLFLVTLAALPQLAVTRASRLAAALGYGRVAGFAVCLWPALYRQIRLSVFAVLVY
SVSVVDVAMILGPKLPPTLPVRVTQWAGDDDLGARFLASAGAFLQLGVVVAAMAIWIA
LERIGKAVLARLTFSGRRFARDGAVRAAGALAMTTCTVTIFAGLSLLSIWSVAGLWPF
PDALPGSLTPNTWMRILPQLWAPLGTTVALALSASSLALVFTILLLYRNGIASSRKNA
GGYRLLYLPLLVPEISFIFGLQVLMLSAGLTPGFASVLAVHFVFVLPYVVLSLSAPWR
EVDPRFEKIAAGFGKPALEILFAVRLPLLFRACLTALAVGFAVSISLYLPTLLIGSGR
LTTITTEAVALSSGGDRRVIGIYALVQGLLPFLAFLVASLGPQLLFRNRRAMRT"
misc_feature complement(78135..79730)
/locus_tag="SMc02588"
/note="ABC-type uncharacterized transport system, permease
component [General function prediction only]; Region:
COG4135"
/db_xref="CDD:33891"
misc_feature complement(78147..>78632)
/locus_tag="SMc02588"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits...; Region: TM_PBP2;
cl00427"
/db_xref="CDD:174197"
gene complement(79804..81030)
/locus_tag="SMc02589"
/db_xref="GeneID:1231695"
CDS complement(79804..81030)
/locus_tag="SMc02589"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative ABC transporter solute-binding protein"
/protein_id="NP_384176.1"
/db_xref="GI:15963823"
/db_xref="GeneID:1231695"
/translation="MIRRAGKIIAAALLALGLAGRASATDAGNWEAVAAEASGQTVYF
NAWGGSENVNAYIRWAGDEMKARYGVTVVHVKLDDTAKATATVLAEKSAGKDEGGSVD
LVWINGENFAAMKRQGLLYAPGWATKLPNWRYVDHENMPTVLTDFTIPTDGLESPWGG
AKLVFFYDSARMKASELPDSAADLLEWAAANPGRFSYPQPPDFTGSSFLKQVLIELVD
DRAKLQKPVDETTFATDAAPLFAYLDRLTPLLWRKGKAYPQNYADMKQKLADGELDII
FAFNPAEASSAIANGELPETVRSFAFSGGTLGNTHFVAIPYNATAKAGALLLADFLLT
PEAQLRKQDPKIWGDPTVLSPAKLPAADRSAFERLDLGIATLRPGELGPALDEPHPDW
MIRIETEWIRRYGAAN"
misc_feature complement(79807..80961)
/locus_tag="SMc02589"
/note="ABC-type uncharacterized transport system,
periplasmic component [General function prediction only];
Region: COG4134; COG4134"
/db_xref="CDD:33890"
misc_feature complement(79810..80949)
/locus_tag="SMc02589"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:176431"
misc_feature 81374..87895
/inference="non-experimental evidence, no additional
details recorded"
/note="rrn OR SMc02938;
predicted by Homology"
gene 81767..83250
/gene="rRNA-16S"
/locus_tag="SMc02676"
/db_xref="GeneID:1231696"
rRNA 81767..83250
/gene="rRNA-16S"
/locus_tag="SMc02676"
/product="ribosomal RNA-16S"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Homology"
/db_xref="GeneID:1231696"
gene 83507..83583
/gene="tRNA-ILE_GAT"
/locus_tag="SMc02621"
/db_xref="GeneID:1231697"
tRNA 83507..83583
/gene="tRNA-ILE_GAT"
/locus_tag="SMc02621"
/product="tRNA-Ile"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by tRNAscan-SE"
/db_xref="GeneID:1231697"
gene 83723..83798
/gene="tRNA-ALA_TGC"
/locus_tag="SMc02622"
/db_xref="GeneID:1231698"
tRNA 83723..83798
/gene="tRNA-ALA_TGC"
/locus_tag="SMc02622"
/product="tRNA-Ala"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by tRNAscan-SE"
/db_xref="GeneID:1231698"
gene 84406..87280
/gene="rRNA-23S"
/locus_tag="SMc02668"
/db_xref="GeneID:1231699"
rRNA 84406..87280
/gene="rRNA-23S"
/locus_tag="SMc02668"
/product="ribosomal RNA-23S"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Homology"
/db_xref="GeneID:1231699"
gene 87485..87604
/gene="rRNA-5S"
/locus_tag="SMc02669"
/db_xref="GeneID:1231700"
rRNA 87485..87604
/gene="rRNA-5S"
/locus_tag="SMc02669"
/product="ribosomal RNA-5S"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Homology"
/db_xref="GeneID:1231700"
gene 87815..87891
/gene="tRNA-MET_CAT"
/locus_tag="SMc02623"
/db_xref="GeneID:1231701"
tRNA 87815..87891
/gene="tRNA-MET_CAT"
/locus_tag="SMc02623"
/product="tRNA-Met"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by tRNAscan-SE"
/db_xref="GeneID:1231701"
gene 88119..89423
/locus_tag="SMc02590"
/db_xref="GeneID:1231702"
CDS 88119..89423
/locus_tag="SMc02590"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384177.1"
/db_xref="GI:15963824"
/db_xref="GeneID:1231702"
/translation="MLRDIGGLLALTARLLARFWPQLLLAATLGYIARVLLLEAAVGV
GLKVPLGGMVTLSLVVLVKLLVVIVMLAILRPGLPALAALRGAAPSTGVTKTERLSNR
LLVITSAAILPFFAYYAAWGFLGDTVREYSRLALDRVALGERLQIFELLRSRSLVAAI
LACWLVRWLAKRANGRLQSPWLRFVIVAADASWIFIGLYALDRWKDDFIGWIGAGAFL
DMVKAGIVGFSMEAHAAAAGTAVEFQEPGLAAQAQELFFYALLPLVWLVMAAIVYGYD
LSAKPVAAPPPPARATTLRKWLADFAAHFLGGYRTRYRPVWACLRTVLGAGLGTLLAF
VVLYRATGWLPAWAWYGATRHLGPHDLETWQRIGDVLAVVVGSPTELDGGILFAPVRI
ALLAAMLEYAVSRSGEPGGAQAYGNRAISRESAASQSGQVTG"
gene complement(89374..89913)
/locus_tag="SMc02591"
/db_xref="GeneID:1231703"
CDS complement(89374..89913)
/locus_tag="SMc02591"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384178.1"
/db_xref="GI:15963825"
/db_xref="GeneID:1231703"
/translation="MSVPASSRERKSYWISLVSLLAAVPLAVLVGSRGEFAAWLQRRM
EPPLTVEHDGSGQGAGGSWRLISLRRLPGTLPDTSLMLAEIDLSVEAADVLQQALPCA
LSLTDGAGRRWDPLPLPGRLLREADPEVADRPQCTTLTIGEAGDAPLRVVELFLVPRQ
ADGFTLSLALTGSPPILLK"
gene complement(89910..90503)
/locus_tag="SMc02592"
/db_xref="GeneID:1231704"
CDS complement(89910..90503)
/locus_tag="SMc02592"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384179.1"
/db_xref="GI:15963826"
/db_xref="GeneID:1231704"
/translation="MTTFANILALLLAAAALYGMQHSTPSYSEILSPVAVPAAQGKPA
QTERFVFGVAKVHLAGQLVAPQFGEPRTYTTSGKWLVVEAAAKAQDRSVSLTSAAWRG
PSGLRFAMSTRIGSTLGLLGSERLEPGIPRPVLLVFELPEDQIEGGTLLVAETAVTPL
SEQVEIAMDSVPPENRYESLTLARGGRIMPWSLEFHQ"
gene complement(90500..91132)
/locus_tag="SMc02593"
/db_xref="GeneID:1231705"
CDS complement(90500..91132)
/locus_tag="SMc02593"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384180.1"
/db_xref="GI:15963827"
/db_xref="GeneID:1231705"
/translation="MGRFVNGCESGVAMDEQRRSYRQRLIALAAASIGSLAASAISYG
AAIYRAANPEPLRAAVPGETVDTGRWHVTIAGARVSDSPPSGRRPPEPQTFLLVDFEA
GNRSASTAYLPAKLLTFAGLEAKLASPNFYLTRDKAFGPSLHPGMPERLTAVWEWPAG
EMPPRELKLLIGSQVYKKRDNLYGASNWFDRDPVAIVSLTVTQEAARARQ"
gene complement(91222..91890)
/locus_tag="SMc02594"
/db_xref="GeneID:1231706"
CDS complement(91222..91890)
/locus_tag="SMc02594"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384181.1"
/db_xref="GI:15963828"
/db_xref="GeneID:1231706"
/translation="MDIDEDTPPTFASPPCLMHELDPAYAGLSSDRSICADVRRWRTS
ERARLIAQRLAISPDLRAACEAEIVSRLLAEIGHVRGRVVSVYWPFRGEPDLRPLMRQ
IADDGGQCALPVVVEKGRPLEFRIWRPGDKLIRGIWNIPVPARLVSCTPDIVVAPVVG
FDPSCYRLGYGGGYYDRTLATMAATRRVLGVGFAQSRIRTIYPQAHDIRMDVVVTEST
TDRC"
misc_feature complement(91243..91755)
/locus_tag="SMc02594"
/note="5-formyltetrahydrofolate cyclo-ligase family;
Region: 5-FTHF_cyc-lig; cl00360"
/db_xref="CDD:174145"
gene complement(91920..93146)
/gene="metB"
/locus_tag="SMc02595"
/db_xref="GeneID:1231707"
CDS complement(91920..93146)
/gene="metB"
/locus_tag="SMc02595"
/function="small molecule metabolism; amino acid
biosynthesis; methionine"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : probable;
Gene name confidence : probable;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="cystathionine gamma-synthase protein"
/protein_id="NP_384182.1"
/db_xref="GI:15963829"
/db_xref="GeneID:1231707"
/translation="MPRLIPTSHADLMPSRDLLPMLERKSRSDRAETTAAAHGVATDP
AFGSVVPPLYLSSTYEFAGFDTPRAYDYGRSGNPTRDLLAQALAKLEGGADAVVTPSG
MAALDLLLGRLRRNHLVLAPHDCYGGTLRLLKARADLGHLTFRLTDQRDFGGFEAALS
DAPALVLIESPSNPLMRVTDIARLSTLAKAAGSAVAVDNTFLSPALQQPLSLGADYAI
HSATKFLNGHSDVIAGAVIAAEPQEAHDLKRWANVTGAVAAPFDAWLTLRGLRTLFAR
MSSQERSAMTIAEYLDAHPAVRHVHYAGLPDHADHEVARRQQRGFGAMMSFELEGGVP
AVRRFLAHIRCFTLAESLGGVESLVAHPATMTHLDMGPEARERAGIRDELLRLSIGLE
HIDDLMEGLELGLGAC"
misc_feature complement(91923..93065)
/gene="metB"
/locus_tag="SMc02595"
/note="O-succinylhomoserine (thiol)-lyase; Region:
O_succ_thio_ly; TIGR02080"
/db_xref="CDD:131135"
misc_feature complement(91953..93008)
/gene="metB"
/locus_tag="SMc02595"
/note="CGS_like: Cystathionine gamma-synthase is a PLP
dependent enzyme and catalyzes the committed step of
methionine biosynthesis. This pathway is unique to
microorganisms and plants, rendering the enzyme an
attractive target for the development of...; Region:
CGS_like; cd00614"
/db_xref="CDD:99738"
misc_feature complement(order(92124..92126,92361..92366,92370..92372,
92400..92402,92451..92453,92457..92459,92481..92483,
92745..92747,92754..92756,92769..92771,92835..92840,
92844..92849,92925..92927,92931..92933,92964..92969,
92973..92984))
/gene="metB"
/locus_tag="SMc02595"
/note="homodimer interface; other site"
/db_xref="CDD:99738"
misc_feature complement(order(92451..92453,92478..92483,92487..92489,
92553..92555,92640..92642,92769..92771,92838..92846))
/gene="metB"
/locus_tag="SMc02595"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:99738"
misc_feature complement(order(92478..92483,92487..92489,92544..92546,
92553..92555,92769..92771,92838..92846))
/gene="metB"
/locus_tag="SMc02595"
/note="pyridoxal 5'-phosphate binding site; other site"
/db_xref="CDD:99738"
misc_feature complement(92478..92480)
/gene="metB"
/locus_tag="SMc02595"
/note="catalytic residue; other site"
/db_xref="CDD:99738"
gene 93287..94138
/locus_tag="SMc02596"
/db_xref="GeneID:1231708"
CDS 93287..94138
/locus_tag="SMc02596"
/function="miscellaneous; not classified regulator"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transcription regulator protein"
/protein_id="NP_384183.1"
/db_xref="GI:15963830"
/db_xref="GeneID:1231708"
/translation="MDISIARTFLEVVKTGSFVNAAANLNISQTAVSARIRVLEEQLD
RPMFVRNKAGARLTPAGEQFFRFATSLVQVWEAARTTVALPPGREAMVTIGAELSLWN
PLLKHWLLWMRRECASVAIRTTIDRSERLMELVQDGSLDAAVLYGAPNRPGTLTELLF
EEKLVLVRTTALSQPPGPEDLVGIDWGEDFAGSYRAAFPGGRNPVVAISYGPLALDYI
LEVGGSGYFRQGFVRPYLVDGRLELVPNSPEFAYPAYLVSSAKADRSMLDRIRAGLRA
AASSAGV"
misc_feature 93287..94093
/locus_tag="SMc02596"
/note="transcriptional regulator HdfR; Provisional;
Region: PRK03601"
/db_xref="CDD:167556"
misc_feature 93305..93472
/locus_tag="SMc02596"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cl00088"
/db_xref="CDD:173998"
misc_feature 93560..94081
/locus_tag="SMc02596"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:176431"
gene 94214..94570
/locus_tag="SMc04463"
/db_xref="GeneID:1231709"
CDS 94214..94570
/locus_tag="SMc04463"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Homology"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384184.1"
/db_xref="GI:15963831"
/db_xref="GeneID:1231709"
/translation="MRSINISEKLALFSSHWDPHVVSDYNDNDVMVVKFKGEYPFHKH
ETTDDFFYVLEGEMIMDIEGKPSQVVKAGELFVVPKGVVHRPRAETEVKVLLIEPKGE
PNSGDSDREPAPKPRI"
misc_feature <94262..94567
/locus_tag="SMc04463"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:175009"
gene complement(94619..95767)
/locus_tag="SMc02600"
/db_xref="GeneID:1231710"
CDS complement(94619..95767)
/locus_tag="SMc02600"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384185.1"
/db_xref="GI:15963832"
/db_xref="GeneID:1231710"
/translation="MIVPPPPHDRKSGRLPRFKLFSPILAGATLKERLIGCIGALIGI
CVTGLVCGFVFGDDPQLPLIVAPIGASAVLLFAVPASPLAQPWSIIGGNTISALIGVS
VTYIVADQMLAIGLAVALAILAMSLTRSLHPPGGAAALTAVIGGAAVARSGFWFPFIP
VAINSLILVGLGMVFHRLARRQYPHRPGVAPVNTHATADPPPALRVGFNSEDIDSAIA
RLNETLDVSREDIDALLREVELQALIRQRGELTCADIMSRDVVTVPGDTTPDHARYLL
LKHDIRTLPVLDENEKLQGTVGLRELAGKEPGSKLPISAAATARPSDPAIGLLPRLTD
GATHAVVILDDDGKVVGIISQTDLLATLAKSLSHNGLSEIMQGNGQGI"
misc_feature complement(94649..95752)
/locus_tag="SMc02600"
/note="CBS-domain-containing membrane protein [Signal
transduction mechanisms]; Region: COG3448"
/db_xref="CDD:33251"
misc_feature complement(95210..95581)
/locus_tag="SMc02600"
/note="HPP family; Region: HPP; pfam04982"
/db_xref="CDD:147252"
misc_feature complement(94862..>95152)
/locus_tag="SMc02600"
/note="The CBS domain, named after human CBS, is a small
domain originally identified in cystathionine
beta-synthase and is subsequently found in a wide range of
different proteins. CBS domains usually occur in tandem
repeats. They associate to form a so-...; Region:
CBS_pair; cl10010"
/db_xref="CDD:99705"
misc_feature complement(94685..94999)
/locus_tag="SMc02600"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains associated
with the HPP motif domain. These proteins are integral
membrane proteins with four transmembrane spanning
helices. The function of these proteins is...; Region:
CBS_pair_HPP_assoc; cd04600"
/db_xref="CDD:73100"
gene 96049..96345
/locus_tag="SMc02602"
/db_xref="GeneID:1231711"
CDS 96049..96345
/locus_tag="SMc02602"
/function="miscellaneous; unknown"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384186.1"
/db_xref="GI:15963833"
/db_xref="GeneID:1231711"
/translation="MDFFGFSSSVLIWLALGLSGPAFLAAFRADPYNWQSAAETTVGA
AVFVGALGLYLSAGSVLAAAVASLAALAITPLFRVKRQRLPMLAVSILCLGIYL"
gene complement(96439..97359)
/gene="folD1"
/locus_tag="SMc02604"
/db_xref="GeneID:1231712"
CDS complement(96439..97359)
/gene="folD1"
/locus_tag="SMc02604"
/EC_number="1.5.1.5"
/EC_number="3.5.4.9"
/function="small molecule metabolism; biosynthesis of
cofactors, carriers; folic acid"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of
5,10-methenyltetrahydrofolate from
5,10-methylenetetrahydrofolate and subsequent formation of
10-formyltetrahydrofolate from
5,10-methenyltetrahydrofolate"
/codon_start=1
/transl_table=11
/product="bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase"
/protein_id="NP_384187.1"
/db_xref="GI:15963834"
/db_xref="GeneID:1231712"
/translation="MTTIIDGKAVAASINGAIKDANAELQEQTGRKTGLSVIIVGDDP
ASHAYVGAKSRMAKECGFFSVQHTLPKETTQQELAGLVHQLNADDGIHGILVQLPLPE
HLDADAIIQSIRPEKDVDGLHVANAGKLATGDLESGLISCTPAGAMVFVRRVHGRDLS
GLNALVIGRSNLFGKPMAQLLLNANATVTIAHSRTSDLASICRNADIVIAAVGRPEMV
KANWLKTGATVIDVGINRVPAPEKGENRTRLVGDVAFAECAPFASAITPVPGGVGPMT
IAMLMANSVIAAHRASGLKVSERLSKLISG"
misc_feature complement(96466..97359)
/gene="folD1"
/locus_tag="SMc02604"
/note="bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional; Region: PRK14188"
/db_xref="CDD:172676"
misc_feature complement(97000..97353)
/gene="folD1"
/locus_tag="SMc02604"
/note="Tetrahydrofolate dehydrogenase/cyclohydrolase,
catalytic domain; Region: THF_DHG_CYH; pfam00763"
/db_xref="CDD:144385"
misc_feature complement(96496..97017)
/gene="folD1"
/locus_tag="SMc02604"
/note="NADP binding domain of methylene-tetrahydrofolate
dehydrogenase/cyclohydrolase; Region:
NAD_bind_m-THF_DH_Cyclohyd; cd01080"
/db_xref="CDD:133448"
misc_feature complement(order(96748..96750,96775..96780,96784..96786,
96790..96807,96814..96816,96823..96828,96853..96855,
96871..96873,96877..96879,96976..96978,96985..96990))
/gene="folD1"
/locus_tag="SMc02604"
/note="homodimer interface; other site"
/db_xref="CDD:133448"
misc_feature complement(order(96532..96534,96541..96543,96658..96660,
96664..96666,96709..96711,96718..96720,96724..96726,
96781..96786,96850..96855,96931..96933))
/gene="folD1"
/locus_tag="SMc02604"
/note="NADP binding site; other site"
/db_xref="CDD:133448"
misc_feature complement(order(96529..96531,96550..96555))
/gene="folD1"
/locus_tag="SMc02604"
/note="substrate binding site; other site"
/db_xref="CDD:133448"
gene complement(97382..97915)
/gene="soxG"
/locus_tag="SMc02605"
/db_xref="GeneID:1231713"
CDS complement(97382..97915)
/gene="soxG"
/locus_tag="SMc02605"
/EC_number="1.5.3.1"
/function="small molecule metabolism; degradation"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative sarcosine oxidase gamma subunit
protein"
/protein_id="NP_384188.1"
/db_xref="GI:15963835"
/db_xref="GeneID:1231713"
/translation="MSEFRPTLRPALGSRQAVASADFRLSPLPEGTIIHVLARPGQED
IVPFLGRFTDAAPHALRPVSPDQWFIISDAPIPHQEMKSLFAALEPRATGVDQSHGRV
RIRIEGKMAHRALSKGTALDLDPSAFPIGQSAVTLVGHIAAHVTRVGAETFEIIVLRG
FAESLWNDLARMGLEFG"
misc_feature complement(97385..97915)
/gene="soxG"
/locus_tag="SMc02605"
/note="Sarcosine oxidase, gamma subunit family; Region:
SoxG; cl01893"
/db_xref="CDD:164003"
gene complement(97908..100871)
/gene="soxA1"
/locus_tag="SMc02606"
/db_xref="GeneID:1231714"
CDS complement(97908..100871)
/gene="soxA1"
/locus_tag="SMc02606"
/EC_number="1.5.3.1"
/function="small molecule metabolism; degradation"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative sarcosine oxidase alpha subunit
transmembrane protein"
/protein_id="NP_384189.1"
/db_xref="GI:15963836"
/db_xref="GeneID:1231714"
/translation="MSSYRLPKRGLVDRNVPLSFTFDGRPMQGLEGDTLASALLANGR
MLVGRSFKYHRPRGILTAGAAEPNALVTVGRGGRAEPNTRATMQELYEGLEARSQNRW
PSLAFDIGALNGLLSPFLGAGFYYKTFMWPAPLWEKLYEPVIRRAAGLGKASYEADPD
AYEKSWAHCDLLVIGAGPTGLAAALTAGRAGARVILVDEGSLPGGSLLSDTATIDGKA
AADFARDTSDELRSMPNVQVLVRTTAFGWYDGNVFGAVERVQKHVREPASHLPVERLW
RIVAGKALLATGAEERPLVFGGNDRPGVMMAGAMRAYLNRYGVAPGRTPAIFTTNDTG
YTLAQELEAAGVDVVAIVDSRPAAGVDYRGKARLVREAVVCGTKGGKAISAIEVHHGG
RTETIAVDALAMAGGFDPIIHLACHRGGKPVWSAEKAAFLAPGSLKGLEVAGGAAATT
GLAACLGEGAARAEAIVRELGLPCPPVAVVKVESEEGIRSPAPLWSIPGIKDKAFVDF
QNDVHLKDIGLAVREGYSHVELAKRYTTSGMATDQGKLSNVNAIGLIAKARGVSPAEV
GTTTFRPFYTPVSFGALTGAHTGHHFQPVRKSPLHDWAKKHGAVFVETGLWYRSSWFP
RSGERTWRESVEREVLNVRKNAGLCDVSMLGKIEITGSDAAEFLNRVYCNAFLKLPVG
KARYGLMLREDGFIYDDGTTSRLEENRFFMTTTTAYAAGVMNHLEFCAQVLWPQLDVR
LASITDQWAQMAIAGPKARMILQKIVDEDISDAAFPFLAAKEVSLFGGALHGCLFRIS
FSGELAYELAVPAGYGESIADALLEAGKDHGIMPYGVETLSVLRIEKGHVTHNEINGT
IVPADLGFGKMVSAGKPDFVGKAMLQREGLTAPDRPQLVGVVPLDPQQSFRSGSHILA
KGAAATLENDEGYVTSSAYSPHVGSTIALALVRNGRNRHGEEVLVWSGLHGESTPARL
CNPVFFDPQNERLHV"
misc_feature complement(97911..100856)
/gene="soxA1"
/locus_tag="SMc02606"
/note="sarcosine oxidase, alpha subunit family,
heterotetrameric form; Region: soxA; TIGR01372"
/db_xref="CDD:162324"
misc_feature complement(97947..98252)
/gene="soxA1"
/locus_tag="SMc02606"
/note="Glycine cleavage T-protein C-terminal barrel
domain; Region: GCV_T_C; pfam08669"
/db_xref="CDD:149654"
gene complement(100868..101146)
/gene="soxD"
/locus_tag="SMc02607"
/db_xref="GeneID:1231715"
CDS complement(100868..101146)
/gene="soxD"
/locus_tag="SMc02607"
/EC_number="1.5.3.1"
/function="small molecule metabolism; degradation"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="sarcosine oxidase delta subunit protein"
/protein_id="NP_384190.1"
/db_xref="GI:15963837"
/db_xref="GeneID:1231715"
/translation="MASLVPCPNCGRRPKEEFTIKGAALSRPEADADSIDWFDYVYLR
ENPRGAYEEYWHHTSGCRRWLVVARDTVTHEIAACCDAAGRARSEARK"
misc_feature complement(100874..101143)
/gene="soxD"
/locus_tag="SMc02607"
/note="Sarcosine oxidase, delta subunit family; Region:
SoxD; cl01767"
/db_xref="CDD:154579"
gene complement(101172..102422)
/gene="soxB"
/locus_tag="SMc02608"
/db_xref="GeneID:1231716"
CDS complement(101172..102422)
/gene="soxB"
/locus_tag="SMc02608"
/EC_number="1.5.3.1"
/function="small molecule metabolism; degradation; fatty
acid"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="sarcosine oxidase beta subunit protein"
/protein_id="NP_384191.1"
/db_xref="GI:15963838"
/db_xref="GeneID:1231716"
/translation="MRYSALSILLNGLRGNRNWAPAWRQPDPKPHYDVIIVGGGGHGL
ATAYYLAKEFGITNVAVLEKNYIGSGNVGRNTTIIRSNYLLPGNNPFYELSMKLWEGL
EQDFNFNAMVSQRGVLNLFHSDAQRDAYTRRGNAMRLHGVDAELLYRAAVRKMLPFLD
FDNARFPIQGGLLQRRGGTVRHDAVAWGYARGADSRGVDIIQNCEVTGIRRENGRVIG
VETSRGFIGCAKLALAAAGNSSQVAEMAGLRLPIESHVLQAFVSEGLKPFIDGVVTFG
AGHFYVSQSDKGGLVFGGDIDGYNSYAQRGNLATVEHVAEAGKAMIPALSRVRVLRSW
GGIMDMSMDGSPIIDRTPIDNLYLNAGWCYGGFKATPASGFCFAHLLARGAPQKTAAA
FRLDRFERGFLIDEKGQGAQPNLH"
misc_feature complement(101205..102419)
/gene="soxB"
/locus_tag="SMc02608"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:176428"
misc_feature complement(101220..102341)
/gene="soxB"
/locus_tag="SMc02608"
/note="Glycine/D-amino acid oxidases (deaminating) [Amino
acid transport and metabolism]; Region: DadA; COG0665"
/db_xref="CDD:31009"
gene 102517..103491
/gene="glxA"
/locus_tag="SMc02609"
/db_xref="GeneID:1231717"
CDS 102517..103491
/gene="glxA"
/locus_tag="SMc02609"
/function="miscellaneous; not classified regulator"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : probable;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative transcription regulator protein"
/protein_id="NP_384192.1"
/db_xref="GI:15963839"
/db_xref="GeneID:1231717"
/translation="MAASSDSRNVQRIGFLLVRNFALMSYASATEPLRAANLLAGRPL
YQIVPLAPGGGTVASSSGLSVGCADLESEGESCHTVFVCAGGEPTDWADTSASHTTLR
RLSRLGIRIGGISSGAFVLAAAGLLDNRDFTIHWEHAPALKEAFPHLNPRHARFVLDG
GIATCGGGVAPLDMMHAMIAERLGTDFARRVSDWYLHAAVAEPAAPQRGSAAERFGTN
HPALLAVLEKMETAIERPLDRTAMARLAGVSPRHLDRLFREHRGTGFLDTYREIRLRH
ARRLLQQSPLSIPEIAYATGFSSPAHFSNAFKRLFSQTPGSLRRRSGS"
misc_feature 102517..103488
/gene="glxA"
/locus_tag="SMc02609"
/note="Transcriptional regulator containing an amidase
domain and an AraC-type DNA-binding HTH domain
[Transcription]; Region: COG4977"
/db_xref="CDD:34583"
misc_feature 102553..103107
/gene="glxA"
/locus_tag="SMc02609"
/note="AraC transcriptional regulators having an
N-terminal Type 1 glutamine amidotransferase
(GATase1)-like domain; Region: GATase1_AraC_ArgR_like;
cd03136"
/db_xref="CDD:153230"
misc_feature 102859..102861
/gene="glxA"
/locus_tag="SMc02609"
/note="conserved cys residue; other site"
/db_xref="CDD:153230"
misc_feature 103363..103476
/gene="glxA"
/locus_tag="SMc02609"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 103542..104504
/gene="glxB"
/locus_tag="SMc02610"
/db_xref="GeneID:1231718"
CDS 103542..104504
/gene="glxB"
/locus_tag="SMc02610"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : probable;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative amidotransferase protein"
/protein_id="NP_384193.1"
/db_xref="GI:15963840"
/db_xref="GeneID:1231718"
/translation="MVPRLRASIVPCTNGGTTRMCGIVGLFLKDSRLEPQLGQLLSDM
LITMTDRGPDSAGLAIYGSATEGKAKVTIQSAKPEIDFADLERDLAEAGVPARVAVKS
THAVVAIAAARLADVRAVLAAIRPDVRIMGAGDSVEIYKEVGLPKDVVARFDVRSMGG
SHGIGHTRMATESAVTTLGAHPFSTGSDQCLVHNGSLSNHNNLRRELIREGIAFETQN
DTEVAAAYLTAEMAKGKDLGQALTGALDDLDGFFTFVVGTKSGFGVVRDPIACKPAVM
AETDRYVAFGSEYRALVNLPDIESARIWEPEPATVYFWDHQKAA"
misc_feature 103599..>103850
/gene="glxB"
/locus_tag="SMc02610"
/note="Glucosamine 6-phosphate synthetase, contains
amidotransferase and phosphosugar isomerase domains [Cell
envelope biogenesis, outer membrane]; Region: GlmS;
COG0449"
/db_xref="CDD:30798"
misc_feature 103602..>103727
/gene="glxB"
/locus_tag="SMc02610"
/note="Glutamine amidotransferases class-II (GATase). The
glutaminase domain catalyzes an amide nitrogen transfer
from glutamine to the appropriate substrate. In this
process, glutamine is hydrolyzed to glutamic acid and
ammonia. This domain is related to...; Region: Gn_AT_II;
cl00319"
/db_xref="CDD:153682"
misc_feature 103917..104483
/gene="glxB"
/locus_tag="SMc02610"
/note="Glutamine amidotransferases class-II
(Gn-AT)_GlxB-type. GlxB is a glutamine
amidotransferase-like protein of unknown function found in
bacteria and archaea. GlxB has a structural fold similar
to that of other class II glutamine amidotransferases...;
Region: GlxB; cd01907"
/db_xref="CDD:73286"
misc_feature order(104043..104048,104121..104126,104196..104198)
/gene="glxB"
/locus_tag="SMc02610"
/note="putative active site; other site"
/db_xref="CDD:73286"
gene 104542..105228
/gene="glxC"
/locus_tag="SMc02611"
/db_xref="GeneID:1231719"
CDS 104542..105228
/gene="glxC"
/locus_tag="SMc02611"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : probable;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative oxidoreductase protein"
/protein_id="NP_384194.1"
/db_xref="GI:15963841"
/db_xref="GeneID:1231719"
/translation="MPVIDLATTPLREFNRSLHNIQQGSNDLSYEVANPRGSHAVAVG
IDGPVVVDVNGSVGYYCAGMNDGGTVTVHGSAGPGVAENMMSGKVVIEGDASQYAGAT
GRGGLLVIKGNAASRCGISMKGIDIVVHGNIGHMSAFMGQSGHLVVLGDAGDALGDSL
YEAKLFVRGTVKSLGADCIEKEMRPEHLQKLAELLEKADVKDVRPEEFKRYGSARKLY
NFNIDNADAY"
misc_feature 104635..105048
/gene="glxC"
/locus_tag="SMc02611"
/note="GXGXG domain. This domain of unknown function is
found at the C-terminus of the large subunit (gltB) of
glutamate synthase (GltS), in subunit C of tungsten
formylmethanofuran dehydrogenase (FwdC) and in subunit C
of molybdenum formylmethanofuran...; Region: GXGXG;
cd00504"
/db_xref="CDD:29608"
misc_feature order(104644..104649,104707..104709,104716..104721,
104731..104733,104764..104772,104785..104787,
104794..104796,104842..104847,104851..104853,
104878..104892,104899..104904,104908..104910,
104935..104949,104956..104961,104965..104967,
105004..105006,105013..105015,105022..105024)
/gene="glxC"
/locus_tag="SMc02611"
/note="domain_subunit interface; other site"
/db_xref="CDD:29608"
gene 105243..106571
/gene="glxD"
/locus_tag="SMc02612"
/db_xref="GeneID:1231720"
CDS 105243..106571
/gene="glxD"
/locus_tag="SMc02612"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : probable;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative oxidoreductase protein"
/protein_id="NP_384195.1"
/db_xref="GI:15963842"
/db_xref="GeneID:1231720"
/translation="MSYHNPYTPPRKSATFDDYTLAEIRRAAATGIYDIRGAGTKRKV
PHFDDLLFLGASISRYPLEGYREKCDTSVVLGTRFAKKPIHLKIPITIAGMSFGALSG
PAKEALGRGATASGTSTTTGDGGMTDEERGHSQTLVYQYLPSRYGMNPKDLRRADAIE
VVVGQGAKPGGGGMLLGQKISDRVANMRNLPKGIDQRSACRHPDWTGPDDLEIKILEL
REITDWEKPIYVKVGGARPYYDTALAVKAGADVVVLDGMQGGTAATQDVFIENVGMPT
LACIRPAVQALQDLGMHRKVQLVVSGGIRSGADVAKALALGADAVAIGTAALVAIGDN
DPHWEEEYQKLGTTAGAYDDWHEGKDPAGITTQDPELMKRLDPVAAGRRLANYLKVMT
LEAQTIARACGKNHLHNLEPEDLCALTMEAAAMAQVPLAGTSWYPGKGTF"
misc_feature 105318..106496
/gene="glxD"
/locus_tag="SMc02612"
/note="Glutamate synthase (GltS) FMN-binding domain. GltS
is a complex iron-sulfur flavoprotein that catalyzes the
reductive synthesis of L-glutamate from 2-oxoglutarate and
L-glutamine via intramolecular channelling of ammonia, a
reaction in the plant...; Region: GltS_FMN; cd02808"
/db_xref="CDD:73370"
misc_feature 105375..106457
/gene="glxD"
/locus_tag="SMc02612"
/note="Conserved region in glutamate synthase; Region:
Glu_synthase; pfam01645"
/db_xref="CDD:110632"
misc_feature order(105519..105530,105609..105611,105660..105662,
105726..105728,105744..105746,105804..105806,
105933..105935,106020..106028,106143..106145,
106149..106151,106212..106217,106239..106241,
106305..106307,106320..106322)
/gene="glxD"
/locus_tag="SMc02612"
/note="active site"
/db_xref="CDD:73370"
misc_feature order(105519..105530,105609..105611,105660..105662,
105726..105728,105933..105935,106020..106025,
106143..106145,106149..106151,106212..106217)
/gene="glxD"
/locus_tag="SMc02612"
/note="FMN binding site; other site"
/db_xref="CDD:73370"
misc_feature order(105744..105746,105804..105806,106023..106028)
/gene="glxD"
/locus_tag="SMc02612"
/note="substrate binding site; other site"
/db_xref="CDD:73370"
misc_feature order(106239..106241,106305..106307,106320..106322)
/gene="glxD"
/locus_tag="SMc02612"
/note="3Fe-4S cluster binding site; other site"
/db_xref="CDD:73370"
gene 106653..107960
/gene="glnT"
/locus_tag="SMc02613"
/db_xref="GeneID:1231721"
CDS 106653..107960
/gene="glnT"
/locus_tag="SMc02613"
/EC_number="6.3.1.2"
/function="small molecule metabolism; amino acid
biosynthesis; glutamine"
/inference="non-experimental evidence, no additional
details recorded"
/note="predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="glutamine synthetase III protein"
/protein_id="NP_384196.1"
/db_xref="GI:15963843"
/db_xref="GeneID:1231721"
/translation="MTLDLSTFAREKGVKYFMISYTDLFGGQRAKLVPAEAIADMQKG
GAGFAGFATWFDLTPAHPDLFALPDASAVIQLPWKKDVAWVAADCIMDDAPVEQAPRV
VLKKLVAEAAQEGLRVKTGVEPEFFLISPDGSKISDTFDTAEKPCYDQQAIMRRYDVI
AEICDYMLELGWKPYQNDHEDANGQFEMNWEYDDALRTADKHSFFKFMVKSIAEKHGL
RATFMPKPFKGLTGNGCHCHISVWDLAGEVNAFADNKAEFGLSAEGRHFLGGIMKHAS
ALAAVTNPTVNSYKRINAPRTISGATWAPNSVTWTGNNRTHMVRVPGPGRFELRLPDG
AVNPYLLQAIIIAAGLSGVRSKADPGRHYDIDMYKDGHKVTDAPKLPLNLLDALREYN
RDEELQEALGREFSAAYLKLKQGEWNTYCSQFTEWEHQTTLDV"
misc_feature 106665..107954
/gene="glnT"
/locus_tag="SMc02613"
/note="glutamine synthetase, type III; Region:
gln_synth_III; TIGR03105"
/db_xref="CDD:163137"
misc_feature 106950..107699
/gene="glnT"
/locus_tag="SMc02613"
/note="Glutamine synthetase, catalytic domain; Region:
Gln-synt_C; pfam00120"
/db_xref="CDD:143894"
gene complement(108064..108327)
/locus_tag="SMc02614"
/db_xref="GeneID:1231722"
CDS complement(108064..108327)
/locus_tag="SMc02614"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384197.1"
/db_xref="GI:15963844"
/db_xref="GeneID:1231722"
/translation="MAKPINPYLVLMLAAVLPGAGHVALRDAARGLAFAFFVVFFSVI
TYMTAPPDRSFIGRHAGGIFVWALSIPDAYRRARIRTVMARKS"
gene complement(108352..109095)
/locus_tag="SMc02615"
/db_xref="GeneID:1231723"
CDS complement(108352..109095)
/locus_tag="SMc02615"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative signal peptide protein"
/protein_id="NP_384198.1"
/db_xref="GI:15963845"
/db_xref="GeneID:1231723"
/translation="MITTIAFYAFAIASGIWMSVRAVRDRRAAIAERRGLLDDAARHF
PGARITHGADHFPILAGRLDDGRQVRVELVPDTLVCRRLPQLWLKLTLLETSPCARLK
IGALARPTGAEFYSLVHEMPHLLIPPPSGAALLMRGDGNASRRQVERAAAMFAKLFAD
PTLKEAAITPRGVRLVRQAAQGQRGAHLLLRQAHFSITAIAPEVIRRTIAEAEALSGW
LADDEPAYSLPPSAGAFPEVFSGFRTGSA"
gene complement(109201..110598)
/locus_tag="SMc02616"
/db_xref="GeneID:1231724"
CDS complement(109201..110598)
/locus_tag="SMc02616"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative permease transmembrane protein"
/protein_id="NP_384199.1"
/db_xref="GI:15963846"
/db_xref="GeneID:1231724"
/translation="MDDTTSAAPEPDRLRLLRVLGPAHVWALGVGIVLVGEYMGWNFS
VGKGGMIAGLMACWVAGLLYTCVAMIDSEVTSTVAAAGGQYAQAKHIVGPLMAFNVGL
FLVMAYTMLEAANAITVGFLLDTVAGMQGQTGLNQQPFIVLAIMFLAWLNYRGVLATL
TFNLVITAIAFLAIVALFVSVQFGASAVPLDFSAITSDPLPYGWVGIVASLHFGLWYY
LGIEGTCQAAEEVRSPARSLPYGTMAGIMTLLIAATMTWYICSGLMPWEYLGQAGTPL
FDAARVTGSTGLMVLLFVGTAFATLASANGCINDASRAWFSMSRDRYLPSWFGAVHPV
YRTPYRAIVFLVPIALIFALGAPLDQVVTFSILSGLLGYTFMTFNMVMFRNKWPLGRI
KRGYVHPFHPLPTVVLLILCSTAYFAVFLGYGTQLSAMMCFYIVASLWFHFRRYKFVR
RGDQFTMPWPKPHGY"
misc_feature complement(109276..110553)
/locus_tag="SMc02616"
/note="ethanolamine permease; Region: 2A0305; TIGR00908"
/db_xref="CDD:129986"
misc_feature complement(109318..110553)
/locus_tag="SMc02616"
/note="Transmembrane amino acid transporter protein;
Region: Aa_trans; cl00524"
/db_xref="CDD:174264"
gene complement(110613..110774)
/locus_tag="SMc02617"
/db_xref="GeneID:1231725"
CDS complement(110613..110774)
/locus_tag="SMc02617"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384200.1"
/db_xref="GI:15963847"
/db_xref="GeneID:1231725"
/translation="MWDILEYAAWALSALFGVLMLADLVRIDTTYDNELLISSREGEI
EATAERHEI"
gene complement(110788..111171)
/locus_tag="SMc02618"
/db_xref="GeneID:1231726"
CDS complement(110788..111171)
/locus_tag="SMc02618"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384201.1"
/db_xref="GI:15963848"
/db_xref="GeneID:1231726"
/translation="MAYEPPKQSFAGQIFDVITLLVLNIGALYIPLYLGLAGAAKVPD
PIPDPTWEALGQNATEQQQWAALGITDPAAANDIITARFDYSFSWASLIVMAVLVIGY
FVMVVRLSDREYREVIEERFGTERH"
gene complement(111180..111497)
/locus_tag="SMc02619"
/db_xref="GeneID:1231727"
CDS complement(111180..111497)
/locus_tag="SMc02619"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384202.1"
/db_xref="GI:15963849"
/db_xref="GeneID:1231727"
/translation="MEATLSKLGEDASFSQRIDAMHRRDRVCLTAFVVVLWCTLLFAL
FTVWPYIATPAIAVILTVACGLVLLFNTAAIVAMLRHYEEDKHFIYSLDLKHLDEMRP
QSR"
gene 111802..112533
/locus_tag="SMc02620"
/db_xref="GeneID:1231728"
CDS 111802..112533
/locus_tag="SMc02620"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384203.1"
/db_xref="GI:15963850"
/db_xref="GeneID:1231728"
/translation="MGRENAEKHRNSKKNGKAATSAGGARKTAAELARVTLTQDPHAI
RDTREKVLEVAIGHEVRAFRKKLGITVADVASATDISVGMLSKIENGNTSPSLTTLQT
LSRALGVPITAFFRRFEEEHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTSGVV
VEPYLITLTEDSDVFPTFQHDGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPH
GPEELTTLPIRYLSIISYPRGRGED"
misc_feature 111970..112143
/locus_tag="SMc02620"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(111982..111984,111994..111996,112069..112071)
/locus_tag="SMc02620"
/note="non-specific DNA binding site; other site"
/db_xref="CDD:28977"
misc_feature order(111991..111993,112066..112068)
/locus_tag="SMc02620"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(112012..112017,112048..112050,112057..112059,
112069..112074)
/locus_tag="SMc02620"
/note="sequence-specific DNA binding site; other site"
/db_xref="CDD:28977"
misc_feature 112318..112503
/locus_tag="SMc02620"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:175009"
gene 112737..113627
/gene="purU"
/locus_tag="SMc04154"
/db_xref="GeneID:1231729"
CDS 112737..113627
/gene="purU"
/locus_tag="SMc04154"
/EC_number="3.5.1.10"
/function="small molecule metabolism; nucleotide
biosynthesis; purine ribonucleotide biosynthesis"
/inference="non-experimental evidence, no additional
details recorded"
/note="produces formate from formyl-tetrahydrofolate which
is the major source of formate for PurT in de novo purine
nucleotide biosynthesis; has a role in one-carbon
metabolism; forms a homohexamer; activated by methionine
and inhibited by glycine"
/codon_start=1
/transl_table=11
/product="formyltetrahydrofolate deformylase"
/protein_id="NP_384204.3"
/db_xref="GI:195970220"
/db_xref="GeneID:1231729"
/translation="MNMQNFVLTVSCKSTRGVVAALSGYLAEQGCNIADSSQFDDLDT
GKFFMRTSFISEERVGLAALEEGLKPIASKFEMETALHEQSERMKVLLMVSRFGHCLN
DLLYRWKIGALPIDIVGVVSNHFDYQKVVVNHDIPFHHIKVTKENKPKAEAQLMDVVE
QTGAELIVLARYMQVLSDALCKKMSGKIINIHHSFLPSFKGANPYKQAYERGVKLIGA
TAHYVTADLDEGPIIEQDIARITHAQSAEDYVSIGRDVESQVLARAVHAHIHHRCFIN
GNRVVVFPPSPGSYASERMG"
misc_feature 112737..113588
/gene="purU"
/locus_tag="SMc04154"
/note="formyltetrahydrofolate deformylase; Reviewed;
Region: PRK13011"
/db_xref="CDD:171830"
misc_feature 112755..112970
/gene="purU"
/locus_tag="SMc04154"
/note="N-terminal ACT domain of formyltetrahydrofolate
deformylase (F4HF-DF; formyltetrahydrofolate hydrolase);
Region: ACT_F4HF-DF; cd04875"
/db_xref="CDD:153147"
misc_feature 112998..113531
/gene="purU"
/locus_tag="SMc04154"
/note="Formyl transferase; Region: Formyl_trans_N;
cl00395"
/db_xref="CDD:174172"
gene 113903..114958
/locus_tag="SMc04153"
/db_xref="GeneID:1231730"
CDS 113903..114958
/locus_tag="SMc04153"
/EC_number="2.1.2.-"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative aminomethyltransferase protein"
/protein_id="NP_384205.1"
/db_xref="GI:15963852"
/db_xref="GeneID:1231730"
/translation="MGTAWTYEKDMSEEHVAIRTKAGIMDVSGLKKVHLVGPHAIAVL
DYITTRDMTKIYPGRSVYACMLNDRGHFTDDCIVYRTGPNSWMLVHGSGSGYEEIVKQ
AAGRNCAVLFDDDLHDLSLQGPLAVDYLAKYVPGIRDLKYFHHMQTTLFGAPVMISRT
GYTGERGYEIFVRGQDAVMIWDRIVAEGKEMGIIPCCFSVLDMLRVESYLLFYPYDNS
QMYPFADQPPGDSLWELGLDFTVSPGKTGFRGAEEHARLKGRERFKIFGMLIDADGPA
DLGDEVYAEGKKVGVITCPSYSTLTKRSMAIARLDVDKAVQGAKLEVHGKNLNARAIA
HTLTFDDPEKKKRTAVG"
misc_feature 113903..114949
/locus_tag="SMc04153"
/note="Glycine cleavage system T protein
(aminomethyltransferase) [Amino acid transport and
metabolism]; Region: GcvT; COG0404"
/db_xref="CDD:30753"
misc_feature 114641..114907
/locus_tag="SMc04153"
/note="Glycine cleavage T-protein C-terminal barrel
domain; Region: GCV_T_C; pfam08669"
/db_xref="CDD:149654"
gene 114969..115574
/locus_tag="SMc04152"
/db_xref="GeneID:1231731"
CDS 114969..115574
/locus_tag="SMc04152"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384206.1"
/db_xref="GI:15963853"
/db_xref="GeneID:1231731"
/translation="MLVEGIKSRPVYTGLSIQPRARRHIFALEGEGAHALLDRKPALD
ETALSRSEILYVARGSQGKGNDEALRALGADLFFAAPRIATLLFRLRGKLTTAHMGTR
LYIAGTEGFIGQAMMVALDHGMDHASIITEHRGSLARRVQCVHCKGVTEDVTHSPFPC
GHCGLPLLVRDHYSRRLGAFQGVNIDAEEPGSAPDPEELFL"
gene 115571..116536
/locus_tag="SMc04151"
/db_xref="GeneID:1231732"
CDS 115571..116536
/locus_tag="SMc04151"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative ferredoxin protein"
/protein_id="NP_384207.2"
/db_xref="GI:195970219"
/db_xref="GeneID:1231732"
/translation="MSGGTEIPVRVTRVTPVAHRIKRFRFERLDGRPMPYFSGGAHVI
VSMNDNGHVRRNAYSLMSAPYDCSAYEISVLHVEDSRGGSSFMHEKVREGDEMRVSHP
VNLFQPDWRGRKHLLIAGGIGITPFIAMMEQFAREGACFKMHYAIRTRDRGAYCEDLV
ARYGSHRVKIYCDAEDSRIPVARLLDSQPLGTHLYVCGPAGMIDGVLKTGLEAGWPEQ
NLHSERFLSSQPGKPFSIELTRSGKTVHVGHHESMLEAIEAAGIDAPFLCRGGACGQC
ETMVALCDGRLLHNDVYLTDEEKASGRKVMLCVSRFEGKALHLDL"
misc_feature 115589..116344
/locus_tag="SMc04151"
/note="Flavodoxin reductases (ferredoxin-NADPH reductases)
family 1 [Energy production and conversion]; Region: Hmp;
COG1018"
/db_xref="CDD:31221"
misc_feature 115604..116245
/locus_tag="SMc04151"
/note="Phthalate dioxygenase reductase (PDR) is an
FMN-dependent reductase that mediates electron transfer
from NADH to FMN to an iron sulfur cluster. PDR has an an
N-terminal ferrredoxin reductase (FNR)-like NAD(H)
binding domain and a C-terminal iron...; Region: PDR_like;
cd06185"
/db_xref="CDD:99782"
misc_feature order(115730..115732,115739..115741,115745..115747,
115787..115795,115811..115813,115817..115822,
115943..115945,116243..116245)
/locus_tag="SMc04151"
/note="FMN-binding pocket; other site"
/db_xref="CDD:99782"
misc_feature order(115730..115732,115742..115747)
/locus_tag="SMc04151"
/note="flavin binding motif; other site"
/db_xref="CDD:99782"
misc_feature order(115811..115813,115820..115822,115829..115831,
115850..115852)
/locus_tag="SMc04151"
/note="phosphate binding motif; other site"
/db_xref="CDD:99782"
misc_feature order(115919..115921,115931..115942,115946..115948)
/locus_tag="SMc04151"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99782"
misc_feature order(115934..115939,116006..116014,116162..116167)
/locus_tag="SMc04151"
/note="NAD binding pocket; other site"
/db_xref="CDD:99782"
misc_feature 116276..116503
/locus_tag="SMc04151"
/note="2Fe-2S iron-sulfur cluster binding domain.
Iron-sulfur proteins play an important role in electron
transfer processes and in various enzymatic reactions. The
family includes plant and algal ferredoxins, which act as
electron carriers in photosynthesis...; Region: fer2;
cd00207"
/db_xref="CDD:29262"
misc_feature order(116360..116365,116372..116374,116381..116383,
116387..116398,116489..116494)
/locus_tag="SMc04151"
/note="catalytic loop; other site"
/db_xref="CDD:29262"
misc_feature order(116372..116374,116387..116389,116396..116398,
116492..116494)
/locus_tag="SMc04151"
/note="iron binding site; other site"
/db_xref="CDD:29262"
repeat_region complement(116534..116591)
/inference="non-experimental evidence, no additional
details recorded"
/note="Sm-5 OR SMc04656;
REPEAT SM-5;
predicted by Homology"
gene 116646..117686
/locus_tag="SMc04150"
/db_xref="GeneID:1231733"
CDS 116646..117686
/locus_tag="SMc04150"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384208.1"
/db_xref="GI:15963855"
/db_xref="GeneID:1231733"
/translation="MAIAFKQETFRDDFSYRNSPENIRRFPFPFDRDEYMYAVNMEPH
VKGQKGTAFESLIDVDEHYVAEMHDRALVLKEDPLRYQALPHMMTAQWDTLELLMEEQ
AAGFPEHFTLIRNGDQWRWINRPLGIDDTFTFGDRSTLPYEPLEYITRQAQGDFCIVD
QRDGNLWMDAGMVTTQADWSLDFDIGMNFMEWHGPVPLAHQMGVFDRALKFLLNLQQG
KPTRRFNWTMTINPRLDTSPENYHKWGPDRATVTPENVGEKVHLRVEVQSLWRLPRSN
AILFVIRCYLMNMNELVTVPKWARRFPRVLSTLPPELIDYKGLTRYRQTTIDWLSKFD
DGAPTSPGTFPD"
misc_feature 116805..117527
/locus_tag="SMc04150"
/note="Protein of unknown function (DUF3445); Region:
DUF3445; pfam11927"
/db_xref="CDD:152362"
gene 117754..119091
/locus_tag="SMc04149"
/db_xref="GeneID:1231734"
CDS 117754..119091
/locus_tag="SMc04149"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative oxidoreductase protein"
/protein_id="NP_384209.1"
/db_xref="GI:15963856"
/db_xref="GeneID:1231734"
/translation="MTRVAVIGAGPSGLAQLRAFQSAAQKGAEIPEIVCYEKQSDWGG
LWNYTWRTGLDEYGEPVHGSMYRYLWSNGPKECLEFADYTFEEHFGKPIASYPPRAVL
WDYIKGRVEKANVRDWVRFNTPVRMVHFDEETKKFTVTAHNRLEDRMYDEEFDYVVVA
SGHFSTPHVPYFEGVKTFNGRVLHAHDFRDALEFKGKDVLIVGRSYSAEDIGSQCWKY
GAKSVTTSYRSKPMGFNWPENFEERPLLTKLENKTAHFADGSTKEVDALILCTGYQHH
FPFLPDELRLKTANRLWADHLYKGVVFDKNPQLFYIGMQDQFYTFNMFDVQAWWARDV
MMGRIALPPEEELKANFDMWRAREETLEHAEEMIWYQGDYVKELLAETDYPSFDIEGV
NRTFMKWEHHKAENIMGFRDNAYRSLMTGNMSPKHHTPWVEALDDSLEEYLRA"
misc_feature 117754..119088
/locus_tag="SMc04149"
/note="Predicted flavoprotein involved in K+ transport
[Inorganic ion transport and metabolism]; Region: TrkA;
COG2072"
/db_xref="CDD:32255"
misc_feature 117763..118836
/locus_tag="SMc04149"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:176428"
gene complement(119188..121557)
/locus_tag="SMc04148"
/db_xref="GeneID:1231735"
CDS complement(119188..121557)
/locus_tag="SMc04148"
/EC_number="2.1.2.-"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative aminomethyltransferase protein"
/protein_id="NP_384210.1"
/db_xref="GI:15963857"
/db_xref="GeneID:1231735"
/translation="MENRHPGMLGGRPVSASIIRYPGVPALPKDTERYRCKGGGSLVV
RVEAGDLVTVTDAEGGQACELSFVDESGRFQAAGLGAAFTNAAEGLKTILSREEAGTL
RIRSALRRRGADLATAGALRIFGERSTPGSRVEFTIALKGLLIVAAPAEAMSPEAQDT
ATPIEVRVRRSRVVRDYSSALPEPLADPIEDIRIKAATASAYFVRAGEFIQIIDVYGR
QCTDFQAFAARKVDKGLDLALDSTVTRTLLGRSYPAPGLPSKAFDRDFEPLVEIVQDT
VGRHDAFATACNSRYYDDMGYPGHVNCTDNFNAALAPYGIPGRKGWEALNYFYNTDID
HNNQLYLDEPWSRPGDYVLMRALTDLVCVSSSCPDDIDAANGWDPTDIHVRTFSGKEQ
FSRAVAYRMTPDADPELTRETAFHPRFSALTRDYAEYRGYWLPNRFSSAGPVEEYWAC
RERAAVIDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYEHGGMIDDG
TLFRLGDKNFRWIGGDDYSGIWLREQAEKKGFRAWVRSSTDQMHNIAVQGPKSRDILK
EIVWTAPRQPTIGELEWFRFAVGRIGGFEGAPIVVSRTGYTGELGYEIFCHPKDALTV
FDAVWRAGEPHGLRPMGLEALDMVRIEAGLIFAHYDFDDQTDPFEAGIGFTVPLKSKH
DDFIGREALIRRKENPRHLMVGLDIQANEAVGHGDCVHVGRAQIGVITSATRSPVLGK
TIALARIDVTHATVGTQVEIGKLDGQQKRLPAIVVPLSHYDPQKKRPRS"
misc_feature complement(120334..121224)
/locus_tag="SMc04148"
/note="Domain of unknown function (DUF1989); Region:
DUF1989; cl01474"
/db_xref="CDD:163985"
misc_feature complement(119191..120330)
/locus_tag="SMc04148"
/note="Glycine cleavage system T protein
(aminomethyltransferase) [Amino acid transport and
metabolism]; Region: GcvT; COG0404"
/db_xref="CDD:30753"
misc_feature complement(119227..119511)
/locus_tag="SMc04148"
/note="Glycine cleavage T-protein C-terminal barrel
domain; Region: GCV_T_C; pfam08669"
/db_xref="CDD:149654"
gene 121792..123576
/locus_tag="SMc04147"
/db_xref="GeneID:1231736"
CDS 121792..123576
/locus_tag="SMc04147"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative permease protein"
/protein_id="NP_384211.1"
/db_xref="GI:15963858"
/db_xref="GeneID:1231736"
/translation="MTDVVNAGIAAGTEGKLIRALDWKGAFWVAAGVPPLVLFSIGGI
AGTTGKLAFAVWIISMVMGFLQSFTYAEIAGMFANKSGGASIYGATAWLRYSKFIAPL
SVWCNWFAWSPVLSLGCVIAAGYILNALFPIPAADSQAVLDWIGAHAASVTADSPRVA
EYIAAHAGTPPEDAVKAVLAADGVAALTPMIRNWSLVSFSIPFLATANINATFLIGGI
LMLIIFAIQHRGIAGTASVQKWLAMLVLIPLLIIGIYPIVSGHIVASNVTGLVPPTAA
YSGEDGTWSNGGWTLFLGGLYIAAWSTYGFETAVCYTRELKNPRTDTFKAIFYSGLVC
CLFFFLVPFAFQGVLGHAGMLAPGIIDGTGVAEALGGLIGAGRIVTQLLVVLMILALF
LAIMTAMAGSSRTLYQGSKDGWLPKYLNHVNENGAPTRAMWTDFAFNLFLLAIASDVG
GYFFVLAVSNVGYIIFNFLNLNSGWIHRIDSGHIERPWKAPTWLIGLNTVLAFVNALF
LGAGAKVWGYSNALWVGFIFAALILPVFAYRHYFQDRGRFPLEAMEDLGLSGQNLGVR
KAGMLPYLALGGGLAIVLFANWFFQLPA"
misc_feature <122983..123453
/locus_tag="SMc04147"
/note="Transmembrane amino acid transporter protein;
Region: Aa_trans; cl00524"
/db_xref="CDD:174264"
gene complement(123688..126141)
/locus_tag="SMc04146"
/db_xref="GeneID:1231737"
CDS complement(123688..126141)
/locus_tag="SMc04146"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative phosphoketolase"
/protein_id="NP_384212.2"
/db_xref="GI:195970218"
/db_xref="GeneID:1231737"
/translation="MTSPRTARDVSSQEPLSAGPLSADELQRMDAYWRASNYLSVGQI
YLLDNPLLSEPLKREHIKPRLLGHWGTSPGLNMLYVHLNRVIKRDDLEMMYVIGPGHG
GPSLVAHAYLEGTYSEVYPDISQDAEGLRKLFKQFSFPGGIPSHVAPETPGSIHEGGE
LGYALSHAYGAAFDNPELIVACVVGDGEAETGPLATGWHGNKFLNPARDGCVLPILHL
NGYKIANPCFLARIPREELQKFFEGMGYAPLFVEGHDPADVHQQLAAALDTALADIRR
IQTDARVNGNLKRPAWPMIVFRTPKGWTCPAEIDGKKCEDYWRSHQVPMGDMDKPEHI
RILEGWMKSYRPEELFDGDGRLTAELAALAPTGRRRMSDNPHANGGLLLRDLKMPDFR
DYAVAVQSPGAATAESARVMGSYLRDVMKLNLKSGNFRLFSPDENNSNRWQDVLEVTD
RCFMADIYPEDDHLSPDGRLMEVLSEHQSQGWLEGYLLTGRHGFFSCYEAFIHIIDSM
FNQHAKWLKVCNEIPWRRPIASLNYFLSSHVWRQDHNGFSHQDPGFIDHVVNKKADII
RVYLPPDANTLLSVTDHCLRSRNYINVVVAGKQPSPQWLTMDQAVKHCTEGLGIWEWA
SNDKGCEPDVVMACCGDVPTLETLAAVQLLREHLPELKVRVINVVNLMKLQPSGEHPH
GLPDRDFDALFTKDKPIIFAFHGYPWLIHRLTYRRTNHANLHVRGYKEEGTTTTPFDM
VVLNHLDRFHLVEDVIDRLPQLGARAAYFKQAIHERLIDHRHHIEKYGEDMPVISGWK
WGAGSAGKAQGTSTKGDNV"
misc_feature complement(123760..126093)
/locus_tag="SMc04146"
/note="putative phosphoketolase; Provisional; Region:
PRK05261"
/db_xref="CDD:167947"
misc_feature complement(125170..125850)
/locus_tag="SMc04146"
/note="Thiamine pyrophosphate (TPP) family,
Phosphoketolase (PK) subfamily, TPP-binding module; PK
catalyzes the conversion of D-xylulose 5-phosphate and
phosphate to acetyl phosphate,
D-glyceraldehyde-3-phosphate and H2O. This enzyme requires
divalent...; Region: TPP_PK; cd02011"
/db_xref="CDD:48174"
misc_feature complement(order(125479..125481,125485..125487,
125578..125589,125659..125661))
/locus_tag="SMc04146"
/note="TPP-binding site; other site"
/db_xref="CDD:48174"
misc_feature complement(124381..124914)
/locus_tag="SMc04146"
/note="D-xylulose 5-phosphate/D-fructose 6-phosphate
phosphoketolase; Region: XFP; pfam03894"
/db_xref="CDD:112695"
misc_feature complement(123760..124350)
/locus_tag="SMc04146"
/note="XFP C-terminal domain; Region: XFP_C; pfam09363"
/db_xref="CDD:150139"
gene complement(126289..127074)
/locus_tag="SMc04145"
/db_xref="GeneID:1231738"
CDS complement(126289..127074)
/locus_tag="SMc04145"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384213.1"
/db_xref="GI:15963860"
/db_xref="GeneID:1231738"
/translation="MTTRLLITGAAGGLGRYAREGLKGCADVLRLSDVATLSPAGEGE
EIVRCDLAEREAVDQLVRGCDAILHLGAISVESDFDALLQANILGTYNLYEAARKAGV
NRILFASTNHVTGFHPIGETLDHLSPRRPDSLYGVSKCFGEDLSRLYFDKYGMETACL
RIGSCFAEPTNRRMLSTWLSPRDFLALVRRLLDAPKIGHLVLYGVSANRDVWWSNGHA
DFLGWRPQDSSEPYRHEIEKREEEPSDGVRYQGGRHAAAKLPG"
misc_feature complement(126418..127059)
/locus_tag="SMc04145"
/note="NAD dependent epimerase/dehydratase family; Region:
Epimerase; pfam01370"
/db_xref="CDD:144821"
misc_feature complement(126727..127059)
/locus_tag="SMc04145"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:176428"
gene complement(127138..128862)
/gene="ilvD3"
/locus_tag="SMc04144"
/db_xref="GeneID:1231739"
CDS complement(127138..128862)
/gene="ilvD3"
/locus_tag="SMc04144"
/EC_number="4.2.1.9"
/function="small molecule metabolism; amino acid
biosynthesis; isoleucine/valine"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of 3-methyl-2-oxobutanoate
from 2,3,-dihydroxy-3-methylbutanoate"
/codon_start=1
/transl_table=11
/product="dihydroxy-acid dehydratase"
/protein_id="NP_384214.1"
/db_xref="GI:15963861"
/db_xref="GeneID:1231739"
/translation="MTRRKKPEEFRSFRWFGVKDLRAFGHRSRLYQMGYDHAELANKP
VIAIINTWSDINPCHAHLRARAEEVKRGVWQAGGFPIELPAMSLAETYVKPTTMLYRN
FLAMEVEELIRSHPVDGVVLLAGCDKTTPGTIMGAIQVDLPTIFVPAGPMLRGNYRGR
MLGSGSDVWKYWAEKEAGRVTENEWSEMERGIARSFGTCMTMGTASTMTALADTLGLS
LPGASAIPAADAGHARMAALSGARIVEMVFEDLKPSDILTAKAFENALAVHMAMAGST
NAMIHLIAIARRCGVPLTLDDFDRVSAEVPVLCNIRPTGEFLMEDFYYAGGLIALWKQ
LKPLLHTGERNVIGTIGGALDEAEVHLPEVIRPLDRPVAARGGTAILKGNLAPQGCVM
KPAAADPALLQHRGPALVFDDYDAMMKAVNDDDLDVTADTVMILRNAGPVGGPGMPEW
GMLPIPRKLLKEGVRDMVRISDARMSGTSYGACILHVAPEAYVGGPLAAVRNGDIIAL
DVARRTITLEVDQAEIERRLAEWRPPERDYSRGYLKMHAEHIQQAPEGCDFTFLQSPH
KLPEPEIH"
misc_feature complement(127141..128859)
/gene="ilvD3"
/locus_tag="SMc04144"
/note="Dehydratase family; Region: ILVD_EDD; cl00340"
/db_xref="CDD:174127"
misc_feature complement(127192..128736)
/gene="ilvD3"
/locus_tag="SMc04144"
/note="dihydroxy-acid dehydratase; Region: ilvD;
TIGR00110"
/db_xref="CDD:161713"
gene 128940..129662
/locus_tag="SMc04143"
/db_xref="GeneID:1231740"
CDS 128940..129662
/locus_tag="SMc04143"
/function="miscellaneous; not classified regulator"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transcription regulator protein"
/protein_id="NP_384215.1"
/db_xref="GI:15963862"
/db_xref="GeneID:1231740"
/translation="MNDVTLKLKPARRERLADVLYGQILEQIASGQMAEGAKLPSEAH
ICRDFQVSRPVVREALMRLQADGLVVSRQGIGTFVKSRPSDKLTSLAASAEIASYLRA
FEPRLALETECAGLAAMRRTKAQLNQIGEALAALEGAFARGETGWEEDFAFHHAVAEA
AGNELFPRLLEELRDILSGSMRMALGLTRQGSDDRRRRVLEEHRKIYSAISGQNRDLA
RLYMRYHLTESRARITGSHGDL"
misc_feature 128955..129638
/locus_tag="SMc04143"
/note="Transcriptional regulators [Transcription]; Region:
FadR; COG2186"
/db_xref="CDD:32369"
misc_feature 128985..129179
/locus_tag="SMc04143"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature order(128988..128990,129057..129059,129063..129068,
129090..129104,129108..129113,129120..129122,
129150..129155,129159..129170)
/locus_tag="SMc04143"
/note="DNA binding site"
/db_xref="CDD:153418"
misc_feature 129246..129617
/locus_tag="SMc04143"
/note="FCD domain; Region: FCD; cl11656"
/db_xref="CDD:159608"
gene 129937..130821
/locus_tag="SMc04142"
/db_xref="GeneID:1231741"
CDS 129937..130821
/locus_tag="SMc04142"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384216.1"
/db_xref="GI:15963863"
/db_xref="GeneID:1231741"
/translation="MSFDLTFECLLDSRCDVAESPVFDERRNCLFFVDIGRSALHRVD
LSGAGHVEWTIEGGACSTGLARSGRLVLAQRDRVVLFDPDAGAVTREIAAIEPDIADT
RLNDGKVGPDGAFWVGTMHDVPDRRPVASLYRVSPEGAVERKVEGVVCSNGLAWSGDG
SLLFHSDSRGAWIDRWQFDPATGALSGRRRLASLDEASGRPDGAATDAEAHYWSAGVS
AGIVNRFSPEGRLVGTHRFPVPAPTMPCFAGPDLKTLLVTSLRPAGIGKENRSGGIFV
ARSPVAGVAVHRFDDRWI"
misc_feature 129937..130803
/locus_tag="SMc04142"
/note="Gluconolactonase [Carbohydrate transport and
metabolism]; Region: COG3386"
/db_xref="CDD:33193"
gene complement(130842..131483)
/gene="gst9"
/locus_tag="SMc04141"
/db_xref="GeneID:1231742"
CDS complement(130842..131483)
/gene="gst9"
/locus_tag="SMc04141"
/EC_number="2.5.1.18"
/function="miscellaneous"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative glutathione S-transferase protein"
/protein_id="NP_384217.1"
/db_xref="GI:15963864"
/db_xref="GeneID:1231742"
/translation="MKLFYSRNPNPRLAVAVARHLAAEVEFEFASPFAPGQAERFRPL
NPNLSLPILVEAGKSLWEADAIACRLSRAMQSDFWRIGDDEPDMVRWISWGKENFVRA
CDMVQFERGTKQRYGLGPIDQQLVEEGLSMFRTAAAILDMELSGRNWLVGGAVSHADF
RMATFLPFNDAAGLPLGDYPNICRWIDRLEEIDAWRDPFRGLDAPELPPVPER"
misc_feature complement(130860..131483)
/gene="gst9"
/locus_tag="SMc04141"
/note="Glutathione S-transferase [Posttranslational
modification, protein turnover, chaperones]; Region: Gst;
COG0625"
/db_xref="CDD:30970"
misc_feature complement(130914..131237)
/gene="gst9"
/locus_tag="SMc04141"
/note="GST_C family, unknown subfamily 1; composed of
uncharacterized bacterial proteins, with similarity to
GSTs. GSTs are cytosolic dimeric proteins involved in
cellular detoxification by catalyzing the conjugation of
glutathione (GSH) with a wide range of...; Region:
GST_C_1; cd03179"
/db_xref="CDD:48106"
misc_feature complement(order(130980..130982,130992..130994,
131001..131006,131013..131015,131196..131198,
131217..131219))
/gene="gst9"
/locus_tag="SMc04141"
/note="putative N-terminal domain interface; other site"
/db_xref="CDD:48106"
misc_feature complement(order(131067..131069,131205..131207,
131214..131219))
/gene="gst9"
/locus_tag="SMc04141"
/note="putative dimer interface; other site"
/db_xref="CDD:48106"
misc_feature complement(order(130980..130982,130989..130991,
131169..131174,131181..131186,131196..131198))
/gene="gst9"
/locus_tag="SMc04141"
/note="putative substrate binding pocket (H-site); other
site"
/db_xref="CDD:48106"
gene complement(131480..132562)
/locus_tag="SMc04140"
/db_xref="GeneID:1231743"
CDS complement(131480..132562)
/locus_tag="SMc04140"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_384218.1"
/db_xref="GI:15963865"
/db_xref="GeneID:1231743"
/translation="MATSVVLQKVEKRYGALDVIHGIDLTIDPGEFAVFVGPSGCGKS
TLLRMIAGLEEISGGTLMLDSDRMNEVAPARRGIAMVFQSYALYPHMSVYKNLAFGLE
TAGFKKAEIEPKVRRAAEILQIEKLLDRKPKALSGGQRQRVAIGRAIVREPRIFLFDE
PLSNLDAELRVQMRVEISRLHRDLGNTMIYVTHDQVEAMTMADKIVVLNSGRIEQVGA
PLDLYNNPVNRFVAGFIGSPKMNFLKARIADVTGSETAIEVCGGTIRLPRRLNGATQG
QDVTFGIRPEHLSAREGGIELATVNVEIVENLGGETMLYGITPDRQQLTVALEGQQKV
ERGSNLAVHFDPSRCHVFGADGRAMR"
misc_feature complement(131492..132562)
/locus_tag="SMc04140"
/note="glycerol-3-phosphate transporter ATP-binding
subunit; Provisional; Region: ugpC; PRK11650"
/db_xref="CDD:171228"
misc_feature complement(131912..132550)
/locus_tag="SMc04140"
/note="The N-terminal ATPase domain of the maltose
transporter, MalK. ATP binding cassette (ABC) proteins
function from bacteria to human, mediating the
translocation of substances into and out of cells or
organelles. ABC transporters contain two...; Region:
ABC_MalK_N; cd03301"
/db_xref="CDD:73060"
misc_feature complement(132431..132454)
/locus_tag="SMc04140"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(order(131984..131986,132083..132088,
132314..132316,132428..132436,132440..132445))
/locus_tag="SMc04140"
/note="ATP binding site; other site"
/db_xref="CDD:73060"
misc_feature complement(132314..132325)
/locus_tag="SMc04140"
/note="Q-loop/lid; other site"
/db_xref="CDD:73060"
misc_feature complement(132131..132160)
/locus_tag="SMc04140"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73060"
misc_feature complement(132083..132100)
/locus_tag="SMc04140"
/note="Walker B; other site"
/db_xref="CDD:73060"
misc_feature complement(132065..132076)
/locus_tag="SMc04140"
/note="D-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(131978..131998)
/locus_tag="SMc04140"
/note="H-loop/switch region; other site"
/db_xref="CDD:73060"
misc_feature complement(131507..131719)
/locus_tag="SMc04140"
/note="TOBE domain; Region: TOBE_2; cl01440"
/db_xref="CDD:163979"
gene complement(132586..133659)
/locus_tag="SMc04139"
/db_xref="GeneID:1231744"
CDS complement(132586..133659)
/locus_tag="SMc04139"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative oxidoreductase protein"
/protein_id="NP_384219.1"
/db_xref="GI:15963866"
/db_xref="GeneID:1231744"
/translation="MSVKTVAIIGCGIGRSHIVEGYQPHPDKFRVQALCDLNEERLNE
VGDEFGIEQRTRSFNELLDDDSIDIIDICTPPGIHLEQVLAALAAGKHVICEKPLTGS
LEGVDAIMEAEKEARGVLMPIFQYRYGDGIEKAKRIIEAGIAGKPYVGSVETFWLRTP
EYYSVPWRGKWATELGGVLVTHALHLHDMMLHLFGPVARVFGRVATRVNDIEVEDCAS
ASLLMKNGAFVSLSCTLGSQEQISRLRLHFENVTFESSHEPYAPGKDPWKIIAANDEV
QARIDEVTGDWRPVSPRFTTQMAHFHDFLSGRGPLPVTTQDARRALELVTAIYQSADT
GREIELPLGPDSPKYADWRANTR"
misc_feature complement(132634..133659)
/locus_tag="SMc04139"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature complement(133288..133644)
/locus_tag="SMc04139"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:176428"
misc_feature complement(132961..133254)
/locus_tag="SMc04139"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; cl11611"
/db_xref="CDD:159579"
gene complement(133661..134677)
/locus_tag="SMc04138"
/db_xref="GeneID:1231745"
CDS complement(133661..134677)
/locus_tag="SMc04138"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative oxidoreductase protein"
/protein_id="NP_384220.1"
/db_xref="GI:15963867"
/db_xref="GeneID:1231745"
/translation="MDELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEF
SAVYADARRIATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSF
DQLAKLRRVQAETGRIFSILYSEHFESPATVKAGELVAAGAIGEVVHIVGLGPHRLRR
ETRPDWFFRRADYGGILTDIASHQCEQFLFFTGVNDATVLSASVGNQSVPDAPELQDT
GSIHLSTGRTTGMIHVNWLTPEGMPTWGDGRLFIVGTSGTIEVRKTVDLAGREGGNHL
FLADRNGVEHIDCSRVDLPFGRQFLADIRDRTETAMPQERCFKAMELALQAQAIAEQN
GDRN"
misc_feature complement(133751..134677)
/locus_tag="SMc04138"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature complement(134309..134668)
/locus_tag="SMc04138"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:176428"
misc_feature complement(133952..134269)
/locus_tag="SMc04138"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; cl11611"
/db_xref="CDD:159579"
gene complement(134700..135587)
/locus_tag="SMc04137"
/db_xref="GeneID:1231746"
CDS complement(134700..135587)
/locus_tag="SMc04137"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transport system permease ABC
transporter protein"
/protein_id="NP_384221.1"
/db_xref="GI:15963868"
/db_xref="GeneID:1231746"
/translation="MTDATMSSVTAPPPVPTGRRGPVGSFLVHAALIAASIAMIYPLL
WMISASVRPEDEIFASTSLWPSSVDFSSYVRGWFGLDVSFGRFFWNSLVIAVLTVVGN
VVACSLAAYAFARLRFAGRNFWFAIMLGTMMIPYHVTLIPQYVLFLDLGWVNTFLPLV
VPKFLASDAFFIFLMVQFFRGIPRELDEAAMMDGCGAWRIYWKIMLPLSLPVLATAAI
FSFIWTWDDFFGPLIYLNDMNSYTIQLGLRTFVDSSSTSDWGGLFAMSTLSLVPVFFF
FLFFQRLLIEGIATTGMKR"
misc_feature complement(134769..135326)
/locus_tag="SMc04137"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(134769..134771,134778..134783,
134790..134795,134799..134804,134811..134816,
134844..134849,134889..134894,134901..134912,
134931..134933,134940..134945,134985..134987,
135036..135038,135048..135050,135054..135059,
135066..135068,135072..135074,135078..135083,
135156..135158,135162..135167,135174..135203,
135207..135218,135246..135248,135261..135266,
135273..135278))
/locus_tag="SMc04137"
/note="dimer interface; other site"
/db_xref="CDD:119394"
misc_feature complement(order(134895..134912,135156..135200))
/locus_tag="SMc04137"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(134814..134816,134844..134846,
134853..134855,134892..134894,135096..135098,
135156..135158))
/locus_tag="SMc04137"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(134964..134966,134976..134981,
134997..135035))
/locus_tag="SMc04137"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(135580..136527)
/locus_tag="SMc04136"
/db_xref="GeneID:1231747"
CDS complement(135580..136527)
/locus_tag="SMc04136"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transport system permease ABC
transporter protein"
/protein_id="NP_384222.1"
/db_xref="GI:15963869"
/db_xref="GeneID:1231747"
/translation="MQDTAVAVGTGASSRPAAQGRLARIWASHGAGYMFLLPWLIGFF
GLTLGPAIASLYLSFTNFDLIRAPEWIGTANYARIATADPKFAAAVKVTFLYVVLSVP
FKLAFALLVAILLDRGVRGLTVYRAIFYLPSLLGGSVAIAVLWRQLFAGDGLINSLLA
QFGIEGPSWISHPDYSIWTLVVLSVWQFGSPMIIFLAGLRQIPTDMYEAASLDGASKF
RQFYKITLPLLTPVIFFNAVVQTIDAFKAFTPAFIISGGTGGPINSTLFYTLYLYQEA
FGNFRMGYASALAWILVLIIGLFTAFSFLTSRYWVHYDD"
misc_feature complement(135640..136254)
/locus_tag="SMc04136"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(135640..135642,135649..135654,
135661..135666,135670..135675,135682..135687,
135715..135720,135769..135774,135781..135792,
135811..135813,135820..135825,135865..135867,
135916..135918,135925..135930,135940..135942,
135946..135951,135958..135960,135964..135966,
135970..135975,136105..136107,136111..136116,
136123..136152,136156..136161,136180..136182,
136195..136200,136207..136212))
/locus_tag="SMc04136"
/note="dimer interface; other site"
/db_xref="CDD:119394"
misc_feature complement(order(135775..135792,136105..136149))
/locus_tag="SMc04136"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(135685..135687,135715..135717,
135724..135726,135772..135774,135988..135990,
136105..136107))
/locus_tag="SMc04136"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(135844..135846,135856..135861,
135877..135915))
/locus_tag="SMc04136"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(136542..137825)
/locus_tag="SMc04135"
/db_xref="GeneID:1231748"
CDS complement(136542..137825)
/locus_tag="SMc04135"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative periplasmic binding ABC transporter
protein"
/protein_id="NP_384223.1"
/db_xref="GI:15963870"
/db_xref="GeneID:1231748"
/translation="MTHKISRRNVLAGGAALLSMSALAPAFAQEARLRVLWWGSQARA
DRTNKVNQLFQEQNAGVAINGEFLGWSDYWPRLATQVAGRNAPDIIQMDYRYIVEYAR
RGALAPLDDYLGSVLKVEDFDQVQIKGGSVEGKLYGISLGANSAAMMVNAAAFEEAGI
ELPTPSTTWDEMARIGAEITKAGKRKGFYGLSDGSAVEPLFENWLRQRGKALFTADGK
IAYDANDAAEWFAMWQKMREDKACVPPDIQALDQYNVETSPLSLGKAAASFAHSNQFV
AYQGINKDKLALRSHPLIGKDAKGGHYRKPSMFFSVSAQTKDPELGAKYVNFFVKDPK
AAEILGVERGVPESAAVREKLASTLDELGRAMLDYVSGLGALAGDLPPPPPSGAGEAE
FALRNVAEQVGFGQLDAKQGGETLVNEVSQILARG"
misc_feature complement(136548..137717)
/locus_tag="SMc04135"
/note="ABC-type sugar transport system, periplasmic
component [Carbohydrate transport and metabolism]; Region:
UgpB; COG1653"
/db_xref="CDD:31839"
misc_feature complement(136830..137666)
/locus_tag="SMc04135"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:176431"
gene 138020..138697
/locus_tag="SMc04134"
/db_xref="GeneID:1231749"
CDS 138020..138697
/locus_tag="SMc04134"
/function="miscellaneous; not classified regulator"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transcription regulator protein"
/protein_id="NP_384224.1"
/db_xref="GI:15963871"
/db_xref="GeneID:1231749"
/translation="MEKMRDGAKGRNGSGGRAERTLQRDPERTRASILAAATREFAEN
GIGGARVDAIAERAGINKRMLYHYFGDKEQLYLAVLEEAYVGIRTAEKSLNLSDLEPE
QGIAELAMFTWGYFLEHPEFLSLLGTENLHRARWLRQSTRLKELHSSFIDKLSDLLQR
GKAGGLFRPDVDPLNLYLTIAALGYFYLSNQYTLSTIFGRDLMDKSNLDVWQRHIVHV
TLASIRR"
misc_feature 138086..138694
/locus_tag="SMc04134"
/note="pyrimidine utilization regulatory protein R;
Region: RutR; TIGR03613"
/db_xref="CDD:132652"
misc_feature 138116..138256
/locus_tag="SMc04134"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:144144"
gene 138820..139968
/locus_tag="SMc04133"
/db_xref="GeneID:1231750"
CDS 138820..139968
/locus_tag="SMc04133"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative oxidoreductase protein"
/protein_id="NP_384225.1"
/db_xref="GI:15963872"
/db_xref="GeneID:1231750"
/translation="MPRLGIILHGVTGRMGYNQHLVRSILAIRDRGGITLQSGERLEI
DPIIVGRNRDKMEQLAKRHDIARWSTDLDAALADPNDQIFFDAGTTLMRAELIGRALD
AGKHVYCEKPISDDLRTAVKLARKARASGLKHGVVQDKLFLPGLRKLALLRDSGFFGK
ILSVRGEFGYWVFEGDWGVPAQRPSWNYRKKDGGGIILDMLCHWRYVLDNLFGEVKAV
SCLGATHIPSRIDEQGRAYDCDTDDAAYATFELEGGIVAHINSSWAVRVRRDDLVTFQ
VDGTHGSAVAGLTKCWTQHRVNTPKPVWNPDQPQTIDFYRTWDEVPDTQAFDNGFKAQ
WEMFLRHVAEDGPWPHGLEAGAKGVQLAELGLKSWAERRWLDVPELEL"
misc_feature 138820..139956
/locus_tag="SMc04133"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature 138826..139227
/locus_tag="SMc04133"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:176428"
gene 139972..141135
/locus_tag="SMc04132"
/db_xref="GeneID:1231751"
CDS 139972..141135
/locus_tag="SMc04132"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384226.1"
/db_xref="GI:15963873"
/db_xref="GeneID:1231751"
/translation="MVSIDLPIEGRLARYDLTGRPVPFNSRDAKAFSRVAFAAAHVVA
DPLADNDPWLAPAIDWERTLAFRHRLWDLGLGVAESMDTAQRGMGLGWPEARELIRRS
LAEARGRPDALIACGAGTDHLAPGPDVSIDDILAAYESQIEAIEAEGGRIILMASRAL
AAAAKGPEDYIRVYDRVLSQVKEPVIIHWLGEMFDPALEGYWGNADHMAAMKTCLDVL
EAHAAKVDGIKISLLSKEKEIVMRRQLPKGVRMYTGDDFNYAELIAGDEEGHSDALLG
IFDAIAPVASAALEALGSGRNGEFFELLEPTVPLSRHIFKAPTRFYKTGVVFLAYLNG
LQDHFVMIGGQQSARSLVHLAELFRLADKAGALADPELATARMRRVLAMHGVE"
misc_feature 139981..141129
/locus_tag="SMc04132"
/note="Protein of unknown function (DUF993); Region:
DUF993; pfam06187"
/db_xref="CDD:114880"
gene 141146..142561
/locus_tag="SMc04131"
/db_xref="GeneID:1231752"
CDS 141146..142561
/locus_tag="SMc04131"
/function="miscellaneous; unknown"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384227.1"
/db_xref="GI:15963874"
/db_xref="GeneID:1231752"
/translation="MTEAPRVRLAEAEVFERPVEFRFPFRFGSARVATAPQAFVRVRV
EDARGRSAIGWSAEMMMPKWFDKNPGLSPEDNVEQLRASLRLAIEGLTSLQAQTPFGL
HAAAEGDHHRAAAGHGLPALVASYGLALLDRAILDALCRMTGASAAGAVRANLPGITG
ATAPDLEGFDLARFLSRLEPGPRLAVRHTIGLADALTAADLAPGQRLEDGLPQTLEEV
IAAYGHRYFKIKVSGRPAEDTRRLLAIAAVLDQRVDAYRVTLDGNEQFENADAVADLL
DRIAEEPRLEKLRASALFFEQPIVRAEALSRPVTEVAGRMPLEIDESDGDIGAFLRAR
ALGYAGISSKSCKGFYRALVNRARVEMWNAEAGAARSFMSAEDLTTQSGLALQQDLVL
AALVGAGHVERNGHHYVDGMAGAPAAEQAAYLAHHGDLYESGSGRARLAIRGGEITFS
TVLRSVGLGSSVEPDWVAMVS"
misc_feature 141794..142048
/locus_tag="SMc04131"
/note="TIM barrel proteins share a structurally conserved
phosphate binding motif and in general share an eight
beta/alpha closed barrel structure. Specific for this
family is the conserved phosphate binding site at the
edges of strands 7 and 8. The phosphate...; Region:
TIM_phosphate_binding; cl09108"
/db_xref="CDD:176427"
gene 142579..143403
/locus_tag="SMc04130"
/db_xref="GeneID:1231753"
CDS 142579..143403
/locus_tag="SMc04130"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384228.1"
/db_xref="GI:15963875"
/db_xref="GeneID:1231753"
/translation="MQVEGLSINLATIREQCGFAEAVDICLKHGITAIAPWRDQVAAI
GLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLV
AGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQA
LDICETLGPGVGVAIDVYHVWWDPDLANQIARAGKMKAILAHHICDWLVPTKDMLTDR
GMMGDGVIDLKGIRRRIEAAGFHGAQEVEIFSADNWWKRPADEVIATCVERYRNCC"
misc_feature 142633..143385
/locus_tag="SMc04130"
/note="Sugar phosphate isomerases/epimerases [Carbohydrate
transport and metabolism]; Region: IolE; COG1082"
/db_xref="CDD:31279"
misc_feature <142789..>143121
/locus_tag="SMc04130"
/note="AP endonuclease family 2; These endonucleases play
a role in DNA repair. Cleave phosphodiester bonds at
apurinic or apyrimidinic sites; the alignment also
contains hexulose-6-phosphate isomerases, enzymes that
catalyze the epimerization of D-arabino-6-...; Region:
AP2Ec; cl12060"
/db_xref="CDD:175398"
gene 143458..144759
/locus_tag="SMc04129"
/db_xref="GeneID:1231754"
CDS 143458..144759
/locus_tag="SMc04129"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative oxidoreductase protein"
/protein_id="NP_384229.1"
/db_xref="GI:15963876"
/db_xref="GeneID:1231754"
/translation="MMDNKRRFALVGTGNRGTTMWGRDLLAGWRGLVDLVAIADTNAL
RAERARTMIATNAPVYGNVDAMLAETRPDLVIVCTPDDTHDDIVVRALESGADVITEK
PMSTTVEKIRRILDAEKRTGRRVDVSFNYRFAPTAARIKELLNAGEIGRVTSVDFHWY
LDTRHGADYFRRWHAYAEHSGSLFVHKATHHFDLLNWYLDSDPEAVSAFADLQMYGRR
GPFRGPRCKLCPHKSECDFYLDLEADPFLDSLYEEPSEIDSYFRDGCVFREDIDIPDT
MVANIRYRNDVHVSYSLNTFQPIEGHHIAFNGTKGRIELRQYEDQPWETPPEDEILLV
RNFPKGKPAMERITVPHFPGGHYGGDDRLRNTLFEPDAKDPLGQRAGARAGAMSVLCG
IAALQSSRTGKIVRLADLMPELFTDGAQPMRERLKETCSRR"
misc_feature 143476..143844
/locus_tag="SMc04129"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:176428"
misc_feature 143878..>144084
/locus_tag="SMc04129"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; cl11611"
/db_xref="CDD:159579"
gene 144857..147088
/locus_tag="SMc04128"
/db_xref="GeneID:1231755"
CDS 144857..147088
/locus_tag="SMc04128"
/EC_number="3.6.1.-"
/function="cell processes; transport of small molecules;
cations"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative heavy metal transporting ATPase
protein"
/protein_id="NP_384230.1"
/db_xref="GI:15963877"
/db_xref="GeneID:1231755"
/translation="MTGIFRETRFRVDGMDCASCAAKIDTAVRRVAGVEDVNVSVAAG
TMTVRHAARDDIGAQVMRKVGVLGYGLSPLDVAAERQPAQSEHACCGHDHAAGSAHGE
ASHDHGHSTALPASTKPSSRFTAPLPWWRTAKGKLTLACGVALASAYAIGQFVPATEP
WIFTLAMLVGLLPIARRALMAALSGTLFSIEMLMTIAAAGAVFIGAGEEAAMVVFLFL
IGELLEGVAAGKARASIQALTALVPKSALLEENGRTVEVPAESLAPGAIVLVRPGDRL
PADGIIVSGESSVDEAPVTGESTPVLKEAGANVFAGTVNGDGALRVRVTAAAADNTIA
RVIRLVEEAQEKKAPTERFIDRFSRYYTPGVVLVAALVAVIPPLFFGGLWQDWIYKGL
ALLLIGCPCALVISTPAAIAASLSAGARRGLLIKGGAVLENLGRITAVAFDKTGTLTE
GRPKLTDIVGFGRSEAEILGYAAALEQGSSHPLAHAVLSRAEADGLALLPVEGARAIG
GKGVAASADGVELFLGSPEAARERAPLAAEDLARIETLQGEGKTVSVLVVGGRAAGAL
AMRDEPRADAAAGLRALADQGLRVVMLTGDNRATAEAIAGRLGGIEAHAGLLPEDKQR
IVSRLRAEGLVVAKVGDGINDAPALAAADVGIAVGGGTDVALETADAASLHARVSDVA
AMVKLSRVTMRNIHQNIAIALGLKAVFLATTIAGVTGLWPAILADTGATVLVTINALR
LLR"
misc_feature 144884..145072
/locus_tag="SMc04128"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:29471"
misc_feature 144887..147085
/locus_tag="SMc04128"
/note="zinc/cadmium/mercury/lead-transporting ATPase;
Provisional; Region: zntA; PRK11033"
/db_xref="CDD:170902"
misc_feature order(144899..144907,144914..144916)
/locus_tag="SMc04128"
/note="metal-binding site"
/db_xref="CDD:29471"
misc_feature 145490..146152
/locus_tag="SMc04128"
/note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
/db_xref="CDD:143896"
repeat_region 147135..147588
/inference="non-experimental evidence, no additional
details recorded"
/note="Sm-2 OR SMc04871;
REPEAT SM-2;
predicted by Homology"
gene 147807..149342
/locus_tag="SMc04127"
/db_xref="GeneID:1231756"
CDS 147807..149342
/locus_tag="SMc04127"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_384231.1"
/db_xref="GI:15963878"
/db_xref="GeneID:1231756"
/translation="MNNIAIELRGIDKSFGLVHANRNINLRVRKGTIHGIIGENGAGK
STLMSILYGFYQADNGEILVDGKPVSIRDPNAAISVGIGMVHQHFMLVENFTVLENVM
LGAEDSQILNKGIAKARQELKRLEKEYALEVNPDALIEELPVGLQQRVEILKALYRRA
DILILDEPTGVLTPAEADHLFRILGQLKAQGKTIILITHKLREIMAITDEVSVMRRGE
MVATRTTRETSVEELAELMVGRRVLLRVEKGESNPGDVKLAVQGLTVKDSRGVTMVDN
VSFDVRAGEIVGIAGVAGNGQSELLEAIAGIRKAASGTVLLNGRPVDVTGNADAAELR
GRGLAHVPEDRHHVGLVLKFEECENAILGYHHDPRFANGMFLNIDAIRKDAEEKIAKY
DIRPPNARLRTANFSGGNQQKVVLAREMERDPDVLIIGQPTRGVDVGAIEFIHKRIIE
MRDQGKAVLLVSVELDEIRSLSDRILVMFAGRVVGERSPEATEGELGLLMAGVEGRKE
AAE"
misc_feature 147819..149312
/locus_tag="SMc04127"
/note="ABC-type uncharacterized transport systems, ATPase
components [General function prediction only]; Region:
COG3845"
/db_xref="CDD:33636"
misc_feature 147822..148472
/locus_tag="SMc04127"
/note="This family represents the domain I of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and...;
Region: ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:72975"
misc_feature 147918..147941
/locus_tag="SMc04127"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72975"
misc_feature order(147927..147932,147936..147944,148227..148229,
148302..148307,148401..148403)
/locus_tag="SMc04127"
/note="ATP binding site; other site"
/db_xref="CDD:72975"
misc_feature 148218..148229
/locus_tag="SMc04127"
/note="Q-loop/lid; other site"
/db_xref="CDD:72975"
misc_feature 148230..148259
/locus_tag="SMc04127"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72975"
misc_feature 148290..148307
/locus_tag="SMc04127"
/note="Walker B; other site"
/db_xref="CDD:72975"
misc_feature 148314..148325
/locus_tag="SMc04127"
/note="D-loop; other site"
/db_xref="CDD:72975"
misc_feature 148389..148409
/locus_tag="SMc04127"
/note="H-loop/switch region; other site"
/db_xref="CDD:72975"
misc_feature 148566..149255
/locus_tag="SMc04127"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses...; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene 149339..150472
/locus_tag="SMc04126"
/db_xref="GeneID:1231757"
CDS 149339..150472
/locus_tag="SMc04126"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transport system permease ABC
transporter protein"
/protein_id="NP_384232.1"
/db_xref="GI:15963879"
/db_xref="GeneID:1231757"
/translation="MSTPYAKLPGWVEYGLIPLINLAVAFLVAGLVVLLVGENPLEAA
YHLINGAFGRGEYIGFTLYYATTFIFTGLAVAVAFHAGLFNIGGEGQAYVGGIGVALA
CLWLDQTMPWYVVFPLAIVGSAFFGALWAFLPGWLQAKRGSHIVITTIMFNFIASSLM
VYLLTRVLKPLGSMAPQTRTFAEGGQLPKLDWLLSIFGLNIGTAPFNISFLLALAAAF
AVWVLIWRTRLGYEMRTMGHSPSAARYAGISESRITVVAMMISGGLAGMMALNPIMGE
QFRMQLDFVQGAGFVGIAVALMGRSHPGGIIPAAILFGVLYQGGAEIAFEMPSISRDM
IVIIQGLVILFAGALENMFRPAITRAFSARGQRAAAVVQTKGA"
misc_feature 149531..150376
/locus_tag="SMc04126"
/note="Transmembrane subunit (TM) of Treponema pallidum
(Tp) RbsC-1, RbsC-2 and related proteins. This is a
functionally uncharacterized subgroup of TMs which belong
to a larger group of TMs of Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette...; Region:
TM_PBP1_transp_TpRbsC_like; cd06580"
/db_xref="CDD:119322"
misc_feature 150059..150115
/locus_tag="SMc04126"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119322"
gene 150477..151448
/locus_tag="SMc04125"
/db_xref="GeneID:1231758"
CDS 150477..151448
/locus_tag="SMc04125"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transport system permease ABC
transporter protein"
/protein_id="NP_384233.1"
/db_xref="GI:15963880"
/db_xref="GeneID:1231758"
/translation="MDFFHVLVVLLESTIRVSVPLVFAALAGLFTERAGVFDIGLEGK
MLGAAFAAGAAAAVTQSVWVGLGAAILVSVALSLVHGYASITQRGNQIVSGVAINFIV
AGSTVILGEAWFRQGGRTPALAEGARFQTINFPDADMIREIPVLGPVYADLLSGHFLL
TYLAFAMVPISWWILYRTRFGLRLRAVGENPGAVDTAGISVIWLRYRAVICCGILCGF
AGAYLSLAMTAGFVKGMTAGKGYIALAALIFAKWRPLNIMFACLLFGFLDALAIRLQG
TPLPLVGQVPVQLMQALPYILTVILLAGFIGKAIPPKAGGVPYVKER"
misc_feature 150528..151382
/locus_tag="SMc04125"
/note="Transmembrane subunit (TM) of Treponema pallidum
(Tp) RbsC-1, RbsC-2 and related proteins. This is a
functionally uncharacterized subgroup of TMs which belong
to a larger group of TMs of Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette...; Region:
TM_PBP1_transp_TpRbsC_like; cd06580"
/db_xref="CDD:119322"
misc_feature 151050..151106
/locus_tag="SMc04125"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119322"
gene 151452..151910
/gene="cdd"
/locus_tag="SMc04124"
/db_xref="GeneID:1231759"
CDS 151452..151910
/gene="cdd"
/locus_tag="SMc04124"
/EC_number="3.5.4.5"
/function="small molecule metabolism; central intermediary
metabolism; salvage of nucleosides and nucleotides"
/inference="non-experimental evidence, no additional
details recorded"
/note="Reclaims exogenous and endogenous cytidine and
2'-deoxycytidine molecules for UMP synthesis"
/codon_start=1
/transl_table=11
/product="cytidine deaminase"
/protein_id="NP_384234.1"
/db_xref="GI:15963881"
/db_xref="GeneID:1231759"
/translation="MPPESAQRFRDNDMHNYKEKPMSKDELFVAAREAMAKAHAPYSK
FPVGAAIRAEDGRIYTGANIENLSFPEGWCAETTAISHMVMAGQRKITEVAVVAEKLA
LCPPCGGCRQRLAEFSGASTRIYLCDETGIRKTLALSDLLPHSFETEILG"
misc_feature 151533..151868
/gene="cdd"
/locus_tag="SMc04124"
/note="Cytidine deaminase zinc-binding domain. These
enzymes are Zn dependent. The zinc ion in the active site
plays a central role in the proposed catalytic mechanism,
activating a water molecule to form a hydroxide ion that
performs a nucleophilic attack on...; Region:
cytidine_deaminase; cd01283"
/db_xref="CDD:29826"
misc_feature order(151584..151586,151590..151592,151638..151640,
151644..151646,151671..151679,151770..151772,
151779..151781)
/gene="cdd"
/locus_tag="SMc04124"
/note="active site"
/db_xref="CDD:29826"
misc_feature order(151671..151679,151767..151772,151779..151781)
/gene="cdd"
/locus_tag="SMc04124"
/note="catalytic motif; other site"
/db_xref="CDD:29826"
misc_feature order(151671..151673,151677..151679,151770..151772,
151779..151781)
/gene="cdd"
/locus_tag="SMc04124"
/note="Zn binding site; other site"
/db_xref="CDD:29826"
gene 151907..152704
/gene="deoD"
/locus_tag="SMc04123"
/db_xref="GeneID:1231760"
CDS 151907..152704
/gene="deoD"
/locus_tag="SMc04123"
/EC_number="2.4.2.1"
/function="small molecule metabolism; central intermediary
metabolism; salvage of nucleosides and nucleotides"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of a purine and ribose
phosphate from a purine nucleoside; in E. coli this enzyme
functions in xanthosine degradation"
/codon_start=1
/transl_table=11
/product="purine nucleoside phosphorylase"
/protein_id="NP_384235.1"
/db_xref="GI:15963882"
/db_xref="GeneID:1231760"
/translation="MTGAADFLKGRLGAHAPRYGIVLGSGLGSLVDAVAEPLRIPYAE
IPGFPVSSVSGHAGEFVAGRIGDTPVAVLSGRAHYYERGDAKAMRVPIETLKRIGVEN
LILTNSAGSLREDMPPGSVMRIADHIAFAGANPLIGLESDERFVGMTNAYDAALAIGM
EEAAERLGIPLARGVYMWFSGPSFETPAEIRMARILGADAVGMSTVPEVILARFFGLK
VAAASVVTNFAAGMTGSELSHEETKQMAPLGGTRLAAILKEMISSEG"
misc_feature 151916..152689
/gene="deoD"
/locus_tag="SMc04123"
/note="Phosphorylase superfamily; Region: PNP_UDP_1;
cl00303"
/db_xref="CDD:174095"
gene 152705..154027
/gene="deoA"
/locus_tag="SMc04122"
/db_xref="GeneID:1231761"
CDS 152705..154027
/gene="deoA"
/locus_tag="SMc04122"
/EC_number="2.4.2.4"
/function="small molecule metabolism; central intermediary
metabolism; salvage of nucleosides and nucleotides"
/inference="non-experimental evidence, no additional
details recorded"
/note="Catalyzes the reversible phosphorolysis of
thymidine, deoxyuridine and their analogues to their
respective bases and 2-deoxyribose 1-phosphate"
/codon_start=1
/transl_table=11
/product="thymidine phosphorylase"
/protein_id="NP_384236.1"
/db_xref="GI:15963883"
/db_xref="GeneID:1231761"
/translation="MAMLPQEIIRKKRDGDRLDPAEIAGFIAGVTDGSVSEGQAAAFA
MAVWFSGMNRDECVALTLAMRDSGETLDWSDLARPIVDKHSTGGVGDNVSLMLAPIVA
ACGAAVPMISGRGLGHTGGTLDKLESIPGYDIQPSPELFRRVADEVGCAIIGQTADLA
PADKRLYAIRDVTATVDSVPLITASILSKKLAAGLRSLVLDVKLGNGSFMTDPAETEV
LARSLVEVANGAGVRTSALITDMNEPLADAAGNALEIENCLAYLRGEKAGTRLDQVVM
ALAAEMLVAAGIAAHEAEAEAMARRVLGSGEAMERFGLMVHRLGGPADFVDRPGAYLA
KAPAILAVPAGRHGYLTSCKTRELGMAVIELGGGRIRPDDRIDHRVGLTGLRPLGTKV
EKGEPIAFVHAADQSQAEAIAKRVVTLYAIADEEPARRPVIVSKLRAG"
misc_feature 152711..154015
/gene="deoA"
/locus_tag="SMc04122"
/note="thymidine phosphorylase; Region: T_phosphoryl;
TIGR02643"
/db_xref="CDD:131691"
misc_feature 152720..152911
/gene="deoA"
/locus_tag="SMc04122"
/note="Glycosyl transferase family, helical bundle domain;
Region: Glycos_trans_3N; pfam02885"
/db_xref="CDD:145834"
misc_feature 152939..>153499
/gene="deoA"
/locus_tag="SMc04122"
/note="Glycosyl transferase family, a/b domain; Region:
Glycos_transf_3; pfam00591"
/db_xref="CDD:144256"
misc_feature 153749..153973
/gene="deoA"
/locus_tag="SMc04122"
/note="Pyrimidine nucleoside phosphorylase C-terminal
domain; Region: PYNP_C; pfam07831"
/db_xref="CDD:116444"
repeat_region complement(154018..154064)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
gene complement(154131..154760)
/gene="upp"
/locus_tag="SMc04121"
/db_xref="GeneID:1231762"
CDS complement(154131..154760)
/gene="upp"
/locus_tag="SMc04121"
/EC_number="2.4.2.9"
/function="small molecule metabolism; central intermediary
metabolism; salvage of nucleosides and nucleotides"
/inference="non-experimental evidence, no additional
details recorded"
/note="Catalyzes the formation of uracil and
5-phospho-alpha-D-ribosy 1-diphosphate from UMP and
diphosphate"
/codon_start=1
/transl_table=11
/product="uracil phosphoribosyltransferase"
/protein_id="NP_384237.1"
/db_xref="GI:15963884"
/db_xref="GeneID:1231762"
/translation="MDGVTVIGHPLVQHKLTIMRKKETSTAGFRRLLKEISTLLCYEV
TRDLELTTERIETPLVETDAPVLEGKKLVFASILRAGNGLLEGMLELVPSARVAHIGV
YRDHETLQAVEYFFKAPDNINERLVIVVDPMLATGNSAIAAIEKLKERGARNIRFLCL
LAAPEGIRNFQGAHPDVPIFTASIDSHLNEKGYIVPGLGDAGDRMYGTK"
misc_feature complement(154134..154760)
/gene="upp"
/locus_tag="SMc04121"
/note="Phosphoribosyl transferase domain; Region:
Pribosyltran; cl00309"
/db_xref="CDD:174099"
gene complement(154871..155845)
/gene="add"
/locus_tag="SMc04120"
/db_xref="GeneID:1231763"
CDS complement(154871..155845)
/gene="add"
/locus_tag="SMc04120"
/EC_number="3.5.4.4"
/function="small molecule metabolism; central intermediary
metabolism; salvage of nucleosides and nucleotides"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of inosine from adenosine"
/codon_start=1
/transl_table=11
/product="adenosine deaminase"
/protein_id="NP_384238.1"
/db_xref="GI:15963885"
/db_xref="GeneID:1231763"
/translation="MTAHLKKAELHCHIEGATPPELALRQARKYGVDTSAIIRDRAYV
WEDFTSFVRCYDAVASLFRTEGDYALLAETYLTELAKAGTIYSEIIVSPDHGVTIGLG
ADAYIEGLAAGMEAARVKTGIESRMLITGIRHLGPDSVIRTAEYAAMRRHPLVTGFNL
AGEERMHSVAEFSRAFDIVRDAGLGLTIHAGELSGAFSVRDALDHVRPARISHGVRAI
EDGDLVKRLADEGVVLEVCPGSNVALQVFPDFASHPLRRLYEAGVRVTLNSDDPPFFH
TSLAQEYEIAFHAMGFSDSEIDRMTKTAIEAAFVDEPTREKLLAALHV"
misc_feature complement(154880..155845)
/gene="add"
/locus_tag="SMc04120"
/note="adenosine deaminase; Provisional; Region: PRK09358"
/db_xref="CDD:169814"
misc_feature complement(154880..155836)
/gene="add"
/locus_tag="SMc04120"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:174087"
misc_feature complement(order(155036..155038,155207..155209,
155279..155281,155807..155809,155813..155815))
/gene="add"
/locus_tag="SMc04120"
/note="active site"
/db_xref="CDD:30035"
gene complement(155842..157062)
/gene="deoB"
/locus_tag="SMc04119"
/db_xref="GeneID:1231764"
CDS complement(155842..157062)
/gene="deoB"
/locus_tag="SMc04119"
/EC_number="5.4.2.7"
/function="small molecule metabolism; central intermediary
metabolism; salvage of nucleosides and nucleotides"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the transfer of phosphate between the C1
and C5 carbons of pentose"
/codon_start=1
/transl_table=11
/product="phosphopentomutase"
/protein_id="NP_384239.1"
/db_xref="GI:15963886"
/db_xref="GeneID:1231764"
/translation="MARAFLFVLDSFGIGNAPDAEAFGDLGADTLGHIAEFCAAGAAD
RAGLREGPLHLPNMSALGLMHAARLATGRLPAGMALPERVYGIYGAASEVSRGKDTPS
GHWEIAGTPVTFDWGYFPAEGDAFPPELVEAICREGDVPGILGNCHASGTDIIARHGE
EHMRSGKPICYTSSDSVFQIAAHEQTFGLERLLNLCEVVRRLVDDYNIGRVIARPFVG
SDPGSFTRTGNRRDYSVLPPEPTVLDRLQEAGRTVHAIGKIGDIFAHQGVTRLTKANG
NMALFDASLEAIEEAEDGALVFTNFVDFDMLYGHRRDVSGYAAALEAFDARLPDLDRR
LKPGDMVILTADHGCDPTWRGTDHTRERVPVLMFGPTLRSRSFGIADSFAHIGETVAR
HLGIGVGPHGRSLI"
misc_feature complement(155845..157062)
/gene="deoB"
/locus_tag="SMc04119"
/note="2,3-bisphosphoglycerate-independent
phosphoglycerate mutase; Region: PhosphMutase; cl12023"
/db_xref="CDD:175387"
misc_feature complement(155878..157059)
/gene="deoB"
/locus_tag="SMc04119"
/note="Metalloenzyme superfamily; Region: Metalloenzyme;
pfam01676"
/db_xref="CDD:145035"
gene complement(157283..157867)
/locus_tag="SMc04118"
/db_xref="GeneID:1231765"
CDS complement(157283..157867)
/locus_tag="SMc04118"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384240.1"
/db_xref="GI:15963887"
/db_xref="GeneID:1231765"
/translation="MDRLHTRKQHLWGAFHGLLRDRRGAGAVEFAIVAPLLIAAYVGA
FELSLGFTVARKVGRASSAVSDIVTQEQQVSKAFLDGMRNVARNMLVPYDGSDYDLKI
TGIQVNGTTEGKVAWSRGWSDASDGATVPYAVNSVVSVPADLDAVNAFVVRTELVVNH
QLSLFGSDAGGTIPLSRTSYYRQRFGTTINCTDC"
misc_feature complement(157286..157858)
/locus_tag="SMc04118"
/note="Flp pilus assembly protein TadG [Intracellular
trafficking and secretion]; Region: TadG; COG4961"
/db_xref="CDD:34568"
misc_feature complement(157679..157798)
/locus_tag="SMc04118"
/note="TadE-like protein; Region: TadE; pfam07811"
/db_xref="CDD:149078"
gene complement(157875..158489)
/locus_tag="SMc04117"
/db_xref="GeneID:1231766"
CDS complement(157875..158489)
/locus_tag="SMc04117"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384241.1"
/db_xref="GI:15963888"
/db_xref="GeneID:1231766"
/translation="MSIDEKASTPRAPLPRGLFRRLIGDRKGATAIEFAILALPFFIV
VFASIETFIAFAGEQLLANATDTLARKIRTGEITTDIGKPGFTTETQFRQAFCDEIAI
MMTCSATEAEQASKLHLDVRKLPADLSAFPKAVPRNGSDLDTSGFTFAPGGPNDYTMV
RAYYRWTVITDLVRPLVTKLRPAGDSMPRDYLMVSTATFRNENY"
misc_feature complement(157878..158468)
/locus_tag="SMc04117"
/note="Flp pilus assembly protein TadG [Intracellular
trafficking and secretion]; Region: TadG; COG4961"
/db_xref="CDD:34568"
misc_feature complement(158280..158408)
/locus_tag="SMc04117"
/note="TadE-like protein; Region: TadE; pfam07811"
/db_xref="CDD:149078"
repeat_region complement(158601..158658)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region complement(158694..159994)
/note="predicted by Homology"
/mobile_element="insertion sequence:ISRm22 OR SMc04475"
gene complement(158715..159878)
/gene="TRm22"
/locus_tag="SMc04116"
/db_xref="GeneID:1231767"
CDS complement(158715..159878)
/gene="TRm22"
/locus_tag="SMc04116"
/function="elements of external origin; transposon-related
functions"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="NP_384242.1"
/db_xref="GI:15963889"
/db_xref="GeneID:1231767"
/translation="MRFTPSIFAQLLKAIDRRSFQAIVDRHAGDAYDKCFTSWDHLVA
LIYAQLSATTSLRGLEASFNANSQHHYHLGSGRLMRSTLSDANRRRPVAVFAETFALL
AGQLDRQTRREGTKMLRLIDSTPIPLGKLYDWAKSNGRIRGMKLHVVYDPKADCPGIL
DITDANVNDAQIGRTITIEKGATYVFDKGYCHYGWWTAIAEAGASFVTRPKTNMGLAL
VAERPVEQPQGDGFLVLEDSQVSLASKGDSKLPIGLRRVIVKRQDGDTITLLTNDLER
SAVEIGQLYKDRWQIELLFRWIKQHLKIRKFLGNNDNAIRLQIFAAMIAYALLRIAAR
LARVPLPILRFTDLVTQCLFQRKSIAEIHKPPQVNPSRPKPRTIPNQMVFRYA"
misc_feature complement(158919..159740)
/gene="TRm22"
/locus_tag="SMc04116"
/note="FOG: Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3385"
/db_xref="CDD:33192"
misc_feature complement(158919..159542)
/gene="TRm22"
/locus_tag="SMc04116"
/note="Transposase DDE domain; Region: Transposase_11;
pfam01609"
/db_xref="CDD:144990"
gene complement(160043..160459)
/locus_tag="SMc04115"
/db_xref="GeneID:1231768"
CDS complement(160043..160459)
/locus_tag="SMc04115"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384243.1"
/db_xref="GI:15963890"
/db_xref="GeneID:1231768"
/translation="MNMPSAAPRAALLATTALLAIAAPGGARAAEEMMRVYMDHARVL
KLDRPVSKVIIGNAEVADATVADAKTIVLTGRNFGTTNLVILDQDGNAMVDERILVSI
DEGNTVRVYKQTVRTVLSCTPNCERAERQASASSGN"
misc_feature complement(<160151..160348)
/locus_tag="SMc04115"
/note="Flp pilus assembly protein, secretin CpaC
[Intracellular trafficking and secretion]; Region: CpaC;
COG4964"
/db_xref="CDD:34571"
gene 160711..160893
/gene="pilA1"
/locus_tag="SMc04114"
/db_xref="GeneID:1231769"
CDS 160711..160893
/gene="pilA1"
/locus_tag="SMc04114"
/function="structural elements; cell exterior; surface
structures"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative pilin subunit protein"
/protein_id="NP_384244.1"
/db_xref="GI:15963891"
/db_xref="GeneID:1231769"
/translation="MKTIFARLMKDESGATAIEYGLIAALISVALIGGAQTLGGALST
QFTNLGGYLNVEPNAP"
misc_feature 160711..160884
/gene="pilA1"
/locus_tag="SMc04114"
/note="Flp/Fap pilin component; Region: Flp_Fap; cl01585"
/db_xref="CDD:120751"
gene 160977..161501
/gene="cpaA1"
/locus_tag="SMc04113"
/db_xref="GeneID:1231770"
CDS 160977..161501
/gene="cpaA1"
/locus_tag="SMc04113"
/function="structural elements; cell exterior; surface
structures"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative pilus assembly transmembrane protein"
/protein_id="NP_384245.1"
/db_xref="GI:15963892"
/db_xref="GeneID:1231770"
/translation="MELEMINATILVVFPFSLALAALSDLLTMTIPNRVSLVLLVSFF
FVAPLAGLDLAQLGLHTVAAGLIFAVSFALFAANVMGGGDAKLLTASAAWFGFNESLV
TFLVYVSFFGGFLTLIVLLLRSKENLILAARIPVPRLLLTAKKIPYGIAIALGGFAAY
PSSPLMQLAFAQLS"
misc_feature 160983..161486
/gene="cpaA1"
/locus_tag="SMc04113"
/note="Type IV leader peptidase family; Region:
Peptidase_A24; cl02077"
/db_xref="CDD:154734"
gene 161629..162438
/gene="cpaB1"
/locus_tag="SMc04112"
/db_xref="GeneID:1231771"
CDS 161629..162438
/gene="cpaB1"
/locus_tag="SMc04112"
/function="structural elements; cell exterior; surface
structures"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative pilus assembly signal peptide protein"
/protein_id="NP_384246.1"
/db_xref="GI:15963893"
/db_xref="GeneID:1231771"
/translation="MRPVRIIILAVAIGSAAMAGLLAMKLTRAPAPQTAEPVIEQAPT
INVLVAGKSLPVGSRLGADSIHWKAWPKDGVAEGMITEENRPAAVEDLAGAVVRLPIF
TGEPVRQEKIADASNRIMSSLLPAGKRAVATEITVATGAGGFILPNDRVDVIMVRKSD
GDLYLTETVLSNVRVLAIDQQIEEKEDGSKAVVGTTATLELTPDQSKVMTVAQQMADR
ISLALRSVADAQEPDTTAADYLLNGDGRPSIQVIKSGSIVKGDGVALQNQK"
misc_feature 161629..162435
/gene="cpaB1"
/locus_tag="SMc04112"
/note="SAF domain; Region: SAF; cl00555"
/db_xref="CDD:174283"
gene 162451..163986
/gene="cpaC1"
/locus_tag="SMc04111"
/db_xref="GeneID:1231772"
CDS 162451..163986
/gene="cpaC1"
/locus_tag="SMc04111"
/function="structural elements; cell exterior; surface
structures"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative pilus assembly transmembrane protein"
/protein_id="NP_384247.1"
/db_xref="GI:15963894"
/db_xref="GeneID:1231772"
/translation="MKPIAKKFRASLAAGLSFCLTFSGMALPTLPAAEAASSSVVRIV
DSGPGARKTINLGLNKAVVVDLPSDAHDILVADPSLADAITRTSRRIYLFGKSVGQTN
IFVFGPGGEEIVSLEVAVERDVAGLEANLRRFIPDADINVEIISDNVVLTGTVRTPLD
STRAVDLARAFLKGGEATTRNITAQGNNGDADIFAEDRQNSQIVNLLTIEGDDQVTLK
VTVAEVSRQVLKQLGFNGRVSDGESGISFRNPANLGDAIAVGTNALIKGSIGPTTISS
YINAMEQAGVMRTLAEPSLTAISGQEAKFYVGGEFRLAGVQEVSTDDETGQTTVEREV
NDVEYGIRLNFKPVVLGPGRISLQIETDVSEPTYEGSVVTGNSMTAIPGNTFLGIRRR
EASTSVELPSGGSIVIAGLVQDNIRQAMSGLPGASKIPILGTLFRSKDFQRSETELVI
IATPYLVRPVARSAISRPDDNFNPANDLESFFLGRVNRIYGRPEAQPPAGRYHGNVGF
IYK"
misc_feature 162508..163983
/gene="cpaC1"
/locus_tag="SMc04111"
/note="Flp pilus assembly protein, secretin CpaC
[Intracellular trafficking and secretion]; Region: CpaC;
COG4964"
/db_xref="CDD:34571"
misc_feature 162823..163008
/gene="cpaC1"
/locus_tag="SMc04111"
/note="Putative phospholipid-binding domain; Region: BON;
cl02771"
/db_xref="CDD:155094"
misc_feature 163288..163824
/gene="cpaC1"
/locus_tag="SMc04111"
/note="Bacterial type II and III secretion system protein;
Region: Secretin; cl02829"
/db_xref="CDD:164025"
gene 164043..164723
/locus_tag="SMc04110"
/db_xref="GeneID:1231773"
CDS 164043..164723
/locus_tag="SMc04110"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384248.1"
/db_xref="GI:15963895"
/db_xref="GeneID:1231773"
/translation="MALNRLPHRVVLYAIVAALLAGCASKDKLATGALPDDYRTRHPI
VLTEGERTIDIPIASGDTRLTQGTRDVIRGFAAEYRNASSSVIQIMLPRGSVNGHAAQ
IVRKDIRRLLAASGVSPKKMIETTYDASVTGDAAPIRLSYVAITAQTAPCGAWPEDLA
LNTLENRNYYNFGCATQSNLAAQIANPTDLVGPRQMSPIDAEQRGQVIDSWRGTDKGD
GGTTIVFN"
misc_feature 164043..164717
/locus_tag="SMc04110"
/note="Type IV pili component [Cell motility and
secretion]; Region: COG5461; cl02279"
/db_xref="CDD:164017"
misc_feature 164106..164678
/locus_tag="SMc04110"
/note="Pilus biogenesis CpaD protein (pilus_cpaD); Region:
Pilus_CpaD; pfam09476"
/db_xref="CDD:150221"
gene 164746..166032
/gene="cpaE1"
/locus_tag="SMc04109"
/db_xref="GeneID:1231774"
CDS 164746..166032
/gene="cpaE1"
/locus_tag="SMc04109"
/function="miscellaneous; not classified regulator"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative response regulator protein"
/protein_id="NP_384249.1"
/db_xref="GI:15963896"
/db_xref="GeneID:1231774"
/translation="MNAIEYTIDSGGTGDWPADGTRPGDLEQLRPLPRISIHAFCESE
AVQRLMERCGQDRRMAKVSLRVTGGGIAAAANTFAGASTPNLIILETATEPGALLSEL
APLAEVCDPSTRVIVIGRHNDIALYRELIRNGISEYMVAPVGMADMLSAVSAIFVDPE
AEPLGRSLAFIGAKGGCGSSVIAHNCAWGISNLFSTETILADLDLPYGTANIDFDQDP
PQGIAEAVFAPERLDEVFLDRLLTRCSEHLSLLAAPSMLDRAYDFETGAFQPILEILQ
RSAPVSVLDLPHGWTDWTRSVLSAADEVVITAAPDLASLRNAKNLLDALKKLRPNDKV
PHLVLNQVGVPKRPEIAPDEFCASLEIEAAAIIPFDAVLFGNASNSGRMIAEIDRKSP
AAETFAQLSHLLTGRTAIKKARRGGLGKVLAKLGRR"
misc_feature 165238..166029
/gene="cpaE1"
/locus_tag="SMc04109"
/note="Antiactivator of flagellar biosynthesis FleN, an
ATPase [Cell motility]; Region: flhG; COG0455"
/db_xref="CDD:30803"
misc_feature 165247..>165456
/gene="cpaE1"
/locus_tag="SMc04109"
/note="This protein family consists of proteins similar to
the cpaE protein of the Caulobacter pilus assembly and the
orf4 protein of Actinobacillus pilus formation gene
cluster. The function of these proteins are unkown. The
Caulobacter pilus assembly...; Region: CpaE_like; cd03111"
/db_xref="CDD:73340"
misc_feature <165592..165936
/gene="cpaE1"
/locus_tag="SMc04109"
/note="Ras-like GTPase superfamily. The Ras-like
superfamily of small GTPases consists of several families
with an extremely high degree of structural and functional
similarity. The Ras superfamily is divided into at least
four families in eukaryotes: the Ras...; Region:
Ras_like_GTPase; cl10444"
/db_xref="CDD:175213"
gene 166163..167563
/gene="cpaF1"
/locus_tag="SMc02820"
/db_xref="GeneID:1231775"
CDS 166163..167563
/gene="cpaF1"
/locus_tag="SMc02820"
/function="structural elements; cell exterior; surface
structures"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="putative pilus assembly protein"
/protein_id="NP_384250.1"
/db_xref="GI:15963897"
/db_xref="GeneID:1231775"
/translation="MPAVQPVPVERSAAPVLGETVAAPSRPQAAAPPQRRRAPRAEDY
YDTKSQVFSALIDTIDLSQLSKLDIESAREEIRDIVNDIITIKNFAMSISEQEELLDD
ICNDVLGYGPLEPLLARDDIADIMVNGAGQIFIEVGGKVEESEIRFRDNGQLLSICQR
IVSQVGRRVDESSPICDARLPDGSRVNVIAPPLAIDGTALTIRKFKKDKLTLEQLVRF
GSITPEAAVLLQIIGRVRCNIVISGGTGSGKTTLLNCLTRYIDSTERIITCEDSAELQ
LQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNT
GHDGSMGTIHANTPRECLSRMESMIAMGGYTLPARTVREIISGSVDVIIQASRLRDGS
RRITHITEVTGMEGDVIITQDLMRYEIDGEDANGRIVGRHVSTGIGRPHFWDRARYFN
EDKRLAATLDAMEKQQ"
misc_feature 166352..167431
/gene="cpaF1"
/locus_tag="SMc02820"
/note="Flp pilus assembly protein, ATPase CpaF
[Intracellular trafficking and secretion]; Region: CpaF;
COG4962"
/db_xref="CDD:34569"
misc_feature 166796..167353
/gene="cpaF1"
/locus_tag="SMc02820"
/note="Type IV secretory pathway component VirB11, and
related ATPases. The homohexamer, VirB11 is one of eleven
Vir proteins, which are required for T-pilus biogenesis
and virulence in the transfer of T-DNA from the Ti
(tumor-inducing) plasmid of bacterial...; Region:
VirB11-like_ATPase; cd01130"
/db_xref="CDD:29996"
misc_feature order(166805..166807,166898..166915,167330..167332)
/gene="cpaF1"
/locus_tag="SMc02820"
/note="ATP binding site; other site"
/db_xref="CDD:29996"
misc_feature order(166889..166894,166904..166912)
/gene="cpaF1"
/locus_tag="SMc02820"
/note="Walker A motif; other site"
/db_xref="CDD:29996"
misc_feature order(166895..166900,166955..166957,166979..166981,
167000..167011,167015..167020,167087..167095,
167099..167101,167138..167140,167150..167152,
167159..167164,167192..167200,167210..167212,
167219..167221,167321..167323)
/gene="cpaF1"
/locus_tag="SMc02820"
/note="hexamer interface; other site"
/db_xref="CDD:29996"
misc_feature 167102..167119
/gene="cpaF1"
/locus_tag="SMc02820"
/note="Walker B motif; other site"
/db_xref="CDD:29996"
gene 167622..168632
/locus_tag="SMc02821"
/db_xref="GeneID:1231776"
CDS 167622..168632
/locus_tag="SMc02821"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384251.1"
/db_xref="GI:15963898"
/db_xref="GeneID:1231776"
/translation="MFGIDITVLGLAGLVALAAAALAYGVLYPQIETEKKAEGRLRRV
SASETDRTKIKAARDRVNEMSKRRKSVQDSLKELEKKQQEKSANTAPSMKKRLLQAGL
SISLAQFYLFSALFGLFAFLVVLLAGAGLLIAAGVALIGAAGLPRWIVGSMVKRRCRK
FLDEFPNSLDVMVRSIKSGLPLNDALRLIASDGQEPVRTEFRRVVESQQVGLNVPEAC
ARMIHSIPLPEVNFFAIVIAIQAQAGGNLSEALGNLSKVLRERRKMKAKVSALSMEAK
ASACIIGALPFIVATLVYLTSPDYMMVLFTDPRGHIIMGASAVWMSIGIWVMRNMINF
DI"
misc_feature 167709..168629
/locus_tag="SMc02821"
/note="Bacterial type II secretion system protein F
domain; Region: GSPII_F; cl00906"
/db_xref="CDD:154078"
gene 168640..169623
/locus_tag="SMc02822"
/db_xref="GeneID:1231777"
CDS 168640..169623
/locus_tag="SMc02822"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384252.1"
/db_xref="GI:15963899"
/db_xref="GeneID:1231777"
/translation="MAGWIETLTDPNILVAALVSMAVLATFYSLVAPLLERGDLAKRM
KSVATEREQIRARERARLNAEATTGRASLRAQHNTSVREIVERLNLRKALVDDNTVNR
LKTAGYRSQNALNTFLFARFCLPFLFLTVAVLYIFVLGNFADKPIMVRVSFAIGFAYV
GFYAPNIFIANAISKRQQSIRRAWPDALDLLLICVESGVSMELAMRRVADEIAVQSPP
LAEELVLTTAELSFLPERRIALENLGLRTGLDEVKSVTQALIQADRYGTPVAQALRVL
AQESRDQRMTAAEKKAAALPPKLTVPMILFFLPVLVAVILGPAGIQVADKF"
misc_feature 168853..169620
/locus_tag="SMc02822"
/note="Bacterial type II secretion system protein F
domain; Region: GSPII_F; cl00906"
/db_xref="CDD:154078"
repeat_region 169736..171036
/note="predicted by Homology"
/mobile_element="insertion sequence:ISRm22 OR SMc04476"
gene 169852..171015
/gene="TRm22"
/locus_tag="SMc02823"
/db_xref="GeneID:1231778"
CDS 169852..171015
/gene="TRm22"
/locus_tag="SMc02823"
/function="elements of external origin; transposon-related
functions"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : putative;
Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="NP_384253.1"
/db_xref="GI:15963900"
/db_xref="GeneID:1231778"
/translation="MRFTPSIFAQLLKAIDRRSFQAIVDRHAGDAYDKCFTSWDHLVA
LIYAQLSATTSLRGLEASFNANSQHHYHLGSGRLMRSTLSDANRRRPVAVFAETFALL
AGQLDRQTRREGTKMLRLIDSTPIPLGKLYDWAKSNGRIRGMKLHVVYDPKADCPGIL
DITDANVNDAQIGRTITIEKGATYVFDKGYCHYGWWTAIAEAGASFVTRPKTNMGLAL
VAERPVEQPQGDGFLVLEDSQVSLASKGDSKLPIGLRRVIVKRQDGDTITLLTNDLER
SAVEIGQLYKDRWQIELLFRWIKQHLKIRKFLGNNDNAIRLQIFAAMIAYALLRIAAR
LARVPLPILRFTDLVTQCLFQRKSIAEIHKPPQVNPSRPKPRTIPNQMVFRYA"
misc_feature 169990..170811
/gene="TRm22"
/locus_tag="SMc02823"
/note="FOG: Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3385"
/db_xref="CDD:33192"
misc_feature 170188..170811
/gene="TRm22"
/locus_tag="SMc02823"
/note="Transposase DDE domain; Region: Transposase_11;
pfam01609"
/db_xref="CDD:144990"
repeat_region 171057..171112
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region 171115..171163
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region 171169..171228
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
gene complement(171273..172082)
/locus_tag="SMc02824"
/db_xref="GeneID:1231779"
CDS complement(171273..172082)
/locus_tag="SMc02824"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384254.1"
/db_xref="GI:15963901"
/db_xref="GeneID:1231779"
/translation="MTMQDNFSFSLRRLATGVAVAMVALSLSACAGQQGRKELTTGSI
PKLTRPVQSMNATELAAAAERIGQAYERNPKDREAGLNYANLLRMTGRNEQALAVMQQ
VAIYHPADREVLGAYGKAQAAAGQLEQALATISRAQTPDRPDWKLKSAEGAILDQLGR
SAEARLRYREALDLKPNEPSVLSNLGMSYLLTKDLRTAETYLKSAASQPDAGSSVRQN
LALAVGLQGRFQEAETIAGQELTSEQAEANVAYLRSVLSQQGAWKQLAKAD"
misc_feature complement(171279..171989)
/locus_tag="SMc02824"
/note="Flp pilus assembly protein TadD, contains TPR
repeats [Intracellular trafficking and secretion]; Region:
TadD; COG5010"
/db_xref="CDD:34615"
misc_feature complement(171384..171632)
/locus_tag="SMc02824"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi...; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(171387..171389,171423..171425,
171468..171470,171477..171479,171489..171491,
171525..171527,171570..171572,171579..171581,
171591..171593,171627..171629))
/locus_tag="SMc02824"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(order(171405..171410,171417..171422,
171429..171434,171510..171515,171522..171527,
171531..171536,171621..171626))
/locus_tag="SMc02824"
/note="binding surface"
/db_xref="CDD:29151"
gene 172213..173604
/locus_tag="SMc02825"
/db_xref="GeneID:1231780"
CDS 172213..173604
/locus_tag="SMc02825"
/EC_number="3.4.-.-"
/function="macromolecule metabolism; macromolecule
degradation; degradation of proteins, peptides,
glycopeptides"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative aminopeptidase protein"
/protein_id="NP_384255.1"
/db_xref="GI:15963902"
/db_xref="GeneID:1231780"
/translation="MAPFQFIERQSPFNTSNGKTLPIFAVTPAHIETGSIDPIALDWA
KKAGFKAESGAVLLIPSADGHLGGALFGLGANPSDEPFLTGKLARALPAGKWHIETAP
LTANRLALGYGLGSYRFERYKSAKTDAPTLLIPADSDATDIKRQLAGVFLARDLINTP
TNDMGPEALEAAFRALAAHYKADVSVISGEALLTENFPLVHTVGRASAEAPRLLEMRW
GRKGHRKVTLVGKGVCFDTGGLDIKPAASMLLMKKDMGGAANVMGLALMIMDAKLKVD
LRVIVPVVENSISANAFRPGDIYKSRKGLTVQIDNTDAEGRLILADALAYADEEKTDL
VVDMATLTGAARVALGPDLPPFFTDDDDLARDLAEASLTVDDPVWRMPLYRGYDKDVS
ARIADLTNAPSGGMAGSITAALFLKRFVTNAKSWVHFDIFGWAQSERPHSPIGGEAQA
IRALYHHIGRIAG"
misc_feature 172228..173601
/locus_tag="SMc02825"
/note="Leucyl aminopeptidase [Amino acid transport and
metabolism]; Region: PepB; COG0260"
/db_xref="CDD:30609"
misc_feature 172315..173580
/locus_tag="SMc02825"
/note="Cytosol aminopeptidase family, N-terminal and
catalytic domains. Family M17 contains zinc- and
manganese-dependent exopeptidases ( EC 3.4.11.1),
including leucine aminopeptidase. They catalyze removal of
amino acids from the N-terminus of a protein...; Region:
Peptidase_M17; cd00433"
/db_xref="CDD:48344"
misc_feature order(172348..172353,172390..172392,172414..172416,
172684..172686,172690..172698,172828..172830,
172834..172836,172915..172917,172933..172935,
172948..172950,172957..172959,172966..172971,
173065..173067,173071..173082,173086..173088,
173092..173106,173122..173124,173128..173130,
173140..173142,173248..173262,173269..173271,
173347..173352,173356..173358,173371..173373,
173377..173382,173395..173397,173401..173403,
173431..173436,173440..173442,173542..173544)
/locus_tag="SMc02825"
/note="interface (dimer of trimers); other site"
/db_xref="CDD:48344"
misc_feature order(172903..172905,172918..172920,172939..172941,
172972..172974,173149..173151,173155..173157,
173161..173163,173233..173235)
/locus_tag="SMc02825"
/note="Substrate-binding/catalytic site; other site"
/db_xref="CDD:48344"
misc_feature order(172903..172905,172918..172920,172972..172974,
173149..173151,173155..173157)
/locus_tag="SMc02825"
/note="Zn-binding sites; other site"
/db_xref="CDD:48344"
gene 173692..174036
/locus_tag="SMc02826"
/db_xref="GeneID:1231781"
CDS 173692..174036
/locus_tag="SMc02826"
/function="miscellaneous; not classified regulator"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transcription regulator protein"
/protein_id="NP_384256.1"
/db_xref="GI:15963903"
/db_xref="GeneID:1231781"
/translation="MPVELTPSQALGLWHAVSLEQVRVDSRDLTLRQMAILLQIYLVP
PPHTVRGLAASLGVTKPVITRALDTMGALGLVDRIRDERDRRNVIIKRTVEGALYLEK
FGDLIINQGRKM"
misc_feature 173773..174000
/locus_tag="SMc02826"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cl00088"
/db_xref="CDD:173998"
gene 174045..174899
/locus_tag="SMc02827"
/db_xref="GeneID:1231782"
CDS 174045..174899
/locus_tag="SMc02827"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384257.1"
/db_xref="GI:15963904"
/db_xref="GeneID:1231782"
/translation="MPEVLDRRLNAYREDIAEARLRGLVEAKRFVEGTPAAVSVPVTP
LRARPEAGCGTDTELLYGETVRVLDVADGWAWVRSDLDGYVGYVPENVVQPPQAPATH
LVAVPRTFVYRGADLRFPQAFALSMGSRIAVVGEAETRGTRYFLLDGGLAIVADHCIP
AAGALTEDYVAIAARFLETPYLWGGRSGFGIDCSGLVQLAMQMAGRNAPRDSDMQASG
LGRAIEREELTRGDLVFWKGHVAIMEDEKTLLHANGHTMTVAREGLEDAIRRIGWLYA
QPTGYRRP"
misc_feature 174333..174833
/locus_tag="SMc02827"
/note="Cell wall-associated hydrolases
(invasion-associated proteins) [Cell envelope biogenesis,
outer membrane]; Region: Spr; COG0791"
/db_xref="CDD:31134"
misc_feature 174579..>174806
/locus_tag="SMc02827"
/note="NlpC/P60 family; Region: NLPC_P60; cl11438"
/db_xref="CDD:164223"
repeat_region complement(174932..174990)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region complement(175039..175068)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
gene complement(175136..176095)
/locus_tag="SMc02828"
/db_xref="GeneID:1231783"
CDS complement(175136..176095)
/locus_tag="SMc02828"
/EC_number="1.1.1.-"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative hydroxyacid dehydrogenase protein"
/protein_id="NP_384258.1"
/db_xref="GI:15963905"
/db_xref="GeneID:1231783"
/translation="MPAKSPVIVDLKFIPEEVEAALAGAFPGREVIDLADPAHQERDL
SGIDYAVVWKSAPDLFSRAPDLKVVFSGGAGVDHVLTLPGLPDVPLVRFVDRTLTTRM
SEWVMMQCLLHLRQHRAYEALAKKHEWRDLSQPEAADVTVGIMGMGVLGQDAARKLAA
MGFKVIGWSRSKRVIEGVETYDAAGLDAFLGRTDFLVGLLPLTPDTRGIFNAALFAKL
SRNGPFGAPVFINAGRGGSQVEADILECLDSGVLGGASLDVFEREPLSPESRFWDMPN
VYVTPHVAASSDVRALFVHVEHQIARFESGLPLEHVVDKVAGY"
misc_feature complement(175139..176089)
/locus_tag="SMc02828"
/note="Phosphoglycerate dehydrogenase and related
dehydrogenases [Amino acid transport and metabolism];
Region: SerA; COG0111"
/db_xref="CDD:30460"
misc_feature complement(175244..175777)
/locus_tag="SMc02828"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:176428"
gene complement(176106..177734)
/locus_tag="SMc02829"
/db_xref="GeneID:1231784"
CDS complement(176106..177734)
/locus_tag="SMc02829"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_384259.2"
/db_xref="GI:195970217"
/db_xref="GeneID:1231784"
/translation="MTDTLLSVRDLSVAFHQGGETSLAVDRISFDIKRGETVALVGES
GSGKSVSANSILKLLPYPAASHPSGEILFNGKDLLKASDDELRHVRGNDVTMIFQEPM
TSLNPLHTIEQQIGEILEIHQDLKGAAARARTLELLEQVGIREAEKRLGAYPHQLSGG
QRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLKSLKDEHGMSMLFITHDLG
IVRKIADRVCVMTKGKIVETGPTAEIFANPQHAYTRHLLASEPRGEPPPSDASRPIVI
EAKDMKVWFPIKAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGESGSGKTTLGLALTR
LISSKGRIAFVGEDIDAYSFREMRPLRNRMQVVFQDPYGSLSPRMSIADIIGEGLKIH
EKALTDGERDQRVAAALEEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPQFVMLD
EPTSALDMSVQAQVVDLLRDLQRKHNLAYLFISHDLRVVRALANEVIVMRLGKVVEQG
PAERIFEAPTEDYTKALMAAAFNLEAVNLAAVHQ"
misc_feature complement(176136..177734)
/locus_tag="SMc02829"
/note="ABC-type uncharacterized transport system,
duplicated ATPase component [General function prediction
only]; Region: COG4172"
/db_xref="CDD:33913"
misc_feature complement(177018..177722)
/locus_tag="SMc02829"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature complement(177588..177611)
/locus_tag="SMc02829"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(order(177090..177092,177189..177194,
177438..177440,177585..177593,177597..177602))
/locus_tag="SMc02829"
/note="ATP binding site; other site"
/db_xref="CDD:73016"
misc_feature complement(177438..177449)
/locus_tag="SMc02829"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature complement(177237..177266)
/locus_tag="SMc02829"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature complement(177189..177206)
/locus_tag="SMc02829"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature complement(177171..177182)
/locus_tag="SMc02829"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(177084..177104)
/locus_tag="SMc02829"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature complement(<176916..177029)
/locus_tag="SMc02829"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:157624"
misc_feature complement(176211..176912)
/locus_tag="SMc02829"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature complement(176757..176780)
/locus_tag="SMc02829"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(order(176283..176285,176382..176387,
176628..176630,176754..176762,176766..176771))
/locus_tag="SMc02829"
/note="ATP binding site; other site"
/db_xref="CDD:73016"
misc_feature complement(176628..176639)
/locus_tag="SMc02829"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature complement(176430..176459)
/locus_tag="SMc02829"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature complement(176382..176399)
/locus_tag="SMc02829"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature complement(176364..176375)
/locus_tag="SMc02829"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(176277..176297)
/locus_tag="SMc02829"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature complement(<176151..176228)
/locus_tag="SMc02829"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:157624"
gene complement(177743..178876)
/locus_tag="SMc02830"
/db_xref="GeneID:1231785"
CDS complement(177743..178876)
/locus_tag="SMc02830"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="NP_384260.1"
/db_xref="GI:15963907"
/db_xref="GeneID:1231785"
/translation="MSTATAYAGAPEKGWLTPIGRRRWQNFKANRRGYWSLWLFLLLF
GLSLFAEFIANDKPILASYKGEILVPVLFDYPEEKFGGFLAETDYRSDFIRDEIGANG
WMIWPPIRYSYQTVNSSIPHSAPTPPFWLMSEEERCSAYPQGADDPGCIAGNLNWLGT
DDQARDVMARMIYGFRISVLFGLALTIASAVIGVSAGAVQGYFGGWTDLLMQRFIEIW
SSMPVLYILLIIAAILPPGFFILLGIMLLFSWVGFVGVVRAEFLRARNFEYVNAARAL
GVGNGTIMYRHLLPNAMVATLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQ
GKSNLQAPWLGLTAFFAMSIMLSLLIFVGEATRDAFDPRKTFR"
misc_feature complement(177800..178276)
/locus_tag="SMc02830"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(177800..177805,177812..177817,
177824..177829,177833..177838,177845..177850,
177884..177889,177929..177934,177941..177952,
177971..177973,177980..177985,178025..178027,
178076..178078,178085..178090,178100..178102,
178106..178111,178118..178120,178124..178126,
178130..178135,178208..178210,178211..178231,
178235..178246,178274..178276))
/locus_tag="SMc02830"
/note="dimer interface; other site"
/db_xref="CDD:119394"
misc_feature complement(order(177935..177952,178208..178210,
178211..178228))
/locus_tag="SMc02830"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(177848..177850,177884..177886,
177893..177895,177932..177934,178148..178150,
178208..178210))
/locus_tag="SMc02830"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(178004..178006,178016..178021,
178037..178075))
/locus_tag="SMc02830"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(178876..179958)
/locus_tag="SMc02831"
/db_xref="GeneID:1231786"
CDS complement(178876..179958)
/locus_tag="SMc02831"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="NP_384261.1"
/db_xref="GI:15963908"
/db_xref="GeneID:1231786"
/translation="MGAYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTN
AAGSDRLSGNAGDLMPVGGGDGGQYRGAQGLDPDFIAKLEKQFGFDKPPLERFVTMMW
DYMRFDFGESFFRNTPVIDLIIQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTF
DVWTSGVIIVGYAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFDQLSWYEKIIDY
FWHMTLPLITLLLSAFATTTLLTKNSFIDEIKKQYVTTARAKGLTERRVLYGHVFRNA
MLIIIAGFPGAFISAFFTGSLLIEYIFSLDGLGRLGYDAVVKRDYPIVFATLFIYSLM
GLVVSLVSDLIYTWVDPRIDFERRDV"
misc_feature complement(178939..179580)
/locus_tag="SMc02831"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(178939..178944,178951..178956,
178963..178968,178972..178977,178984..178989,
179017..179022,179056..179061,179068..179079,
179101..179103,179110..179115,179155..179157,
179206..179208,179215..179220,179230..179232,
179236..179241,179248..179250,179254..179256,
179260..179265,179407..179409,179413..179418,
179425..179454,179458..179469,179500..179502,
179515..179520,179527..179532))
/locus_tag="SMc02831"
/note="dimer interface; other site"
/db_xref="CDD:119394"
misc_feature complement(order(179062..179079,179407..179451))
/locus_tag="SMc02831"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(178987..178989,179017..179019,
179026..179028,179059..179061,179278..179280,
179407..179409))
/locus_tag="SMc02831"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(179134..179136,179146..179151,
179167..179205))
/locus_tag="SMc02831"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(180139..181998)
/locus_tag="SMc02832"
/db_xref="GeneID:1231787"
CDS complement(180139..181998)
/locus_tag="SMc02832"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative periplasmic binding protein"
/protein_id="NP_384262.1"
/db_xref="GI:15963909"
/db_xref="GeneID:1231787"
/translation="MPNFCRTVKPGLAASLLTAALLLLPPASNAEEQPVWHHATSSIG
EPKYKDGFARFDYVNPDAPKGGELRLSESGTFDSFNPILAKGEVATGVSSLVFETLLK
SAEDEITTSYGLLAEGISYPDDISSATFRLRAEAKWADGKPVTPEDVVFSFDMVKEHN
PLFSNYYRHVISAEKTGERDVTFRFDEKNNHELPNILGQFPILPKHWWEGQDAKGSKR
DISRTTLEPVMGSGPYKIASFQAGGSIRFELRDDYWGKDLNVNVGRYNFRTINYAFFS
DRSVQFEAFRAGNVDFYQDNSASHWATAYDFPAMKDGRVIREEIENPLRATGIMQAFV
PNMRREKFKDQRVRQALNYAFDFEDLNRSLAHNAFQRVDSYFWGTELASSGLPEGREK
EILEELKDKVPAAVFTTPYKNPVNGDPQKVRDNLRKALALFKEAGYELKGSRLVNAKT
GEPFSFEILLSNPTFERTVTPFVNSVRKIGIDARIRTVDDSQYTNRVRSYDYDMIYGI
WAQTLVPGNEQSDYWGSASVNQPGSRNYAGIADPAIDELIRRIVFAPNREELVATTRA
LDRVLLAHHYVVPLFYSKALRVAYWNHLARPKELPYYGMDFPDAWWSKNTAAK"
misc_feature complement(180157..181896)
/locus_tag="SMc02832"
/note="ABC-type oligopeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
OppA; COG4166"
/db_xref="CDD:33908"
misc_feature complement(180208..181848)
/locus_tag="SMc02832"
/note="The substrate-binding component of an
uncharacterized ABC-type
nickel/dipeptide/oligopeptide-like import system contains
the type 2 periplasmic binding fold; Region:
PBP2_NikA_DppA_OppA_like_14; cd08497"
/db_xref="CDD:173862"
gene 182290..183357
/gene="mepA"
/locus_tag="SMc02833"
/db_xref="GeneID:1231788"
CDS 182290..183357
/gene="mepA"
/locus_tag="SMc02833"
/function="structural elements; cell envelope; murein
sacculus, peptidoglycan"
/inference="non-experimental evidence, no additional
details recorded"
/note="D-alanyl-D-alanine endopeptidase; functions in
hydrolyzing cell wall peptidoglycan; similar to LAS
metallopeptidases; forms a dimer in periplasm"
/codon_start=1
/transl_table=11
/product="penicillin-insensitive murein endopeptidase"
/protein_id="NP_384263.1"
/db_xref="GI:15963910"
/db_xref="GeneID:1231788"
/translation="MKFDARAALRRCGSTVLALIMGVSLVSAEAAANDAPPAKELFGA
KDLPMQAAPASFGFYSKGCLAGGVAIPTDGPTWQAMRLSRNRRWGHPAMIALIERFSH
DAVEKIGWPGLLLGDISQPRGGPMLSGHASHQIGLDADIWLTPMPQRTLSYQERETIS
ATSMLDKSKFLTVDPSIWTPSHARLIMMAASYPQVERVFVNPAIKKKLCDTWRGDRAA
LGKVRPIYGHDYHFHIRIKCPPGSKGCKDQAVVPAGDGCDKSLAWWFTDEPWAKPKQK
PGAKPPKPKFAKLADLPKACALVLNGPAPASEQEATYGTAYRAPAAIPAAATSIEAVI
EAAGEAPLANIPVPSPRPGLQ"
misc_feature 182323..183219
/gene="mepA"
/locus_tag="SMc02833"
/note="Murein endopeptidase [Cell envelope biogenesis,
outer membrane]; Region: MepA; COG3770"
/db_xref="CDD:33565"
misc_feature 182404..183090
/gene="mepA"
/locus_tag="SMc02833"
/note="Penicillin-insensitive murein endopeptidase;
Region: Peptidase_M74; cl01538"
/db_xref="CDD:174644"
gene 183478..183858
/gene="mgsA"
/locus_tag="SMc02834"
/db_xref="GeneID:1231789"
CDS 183478..183858
/gene="mgsA"
/locus_tag="SMc02834"
/EC_number="4.2.3.3"
/function="small molecule metabolism; central intermediary
metabolism; pool of unassigned individual reversibles
reactions"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the formation of methylglyoxal from
glycerone phosphate"
/codon_start=1
/transl_table=11
/product="methylglyoxal synthase"
/protein_id="NP_384264.1"
/db_xref="GI:15963911"
/db_xref="GeneID:1231789"
/translation="MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWKIVATGTTGGR
VLDVCPALDIVRLKSGPLGGDQQIGALIATGDVDCLIFFVDPLTAMPHDVDVKALMRL
AIVYDIPMALNRATAEQLIDFRRN"
misc_feature 183496..183840
/gene="mgsA"
/locus_tag="SMc02834"
/note="Methylglyoxal synthase catalyzes the enolization of
dihydroxyacetone phosphate (DHAP) to produce
methylglyoxal. The first part of the catalytic mechanism
is believed to be similar to TIM (triosephosphate
isomerase) in that both enzymes utilize DHAP to...;
Region: MGS; cd01422"
/db_xref="CDD:29634"
misc_feature order(183505..183507,183523..183525,183589..183591,
183595..183600,183652..183657,183670..183672,
183751..183753)
/gene="mgsA"
/locus_tag="SMc02834"
/note="active site"
/db_xref="CDD:29634"
misc_feature order(183514..183516,183595..183597,183649..183654,
183658..183663,183673..183678,183694..183696,
183733..183735,183760..183762,183769..183771,
183778..183786,183790..183807,183814..183825,
183832..183834)
/gene="mgsA"
/locus_tag="SMc02834"
/note="dimer interfaces; other site"
/db_xref="CDD:29634"
misc_feature order(183670..183672,183751..183753)
/gene="mgsA"
/locus_tag="SMc02834"
/note="catalytic residues; other site"
/db_xref="CDD:29634"
gene 183920..184939
/gene="glk"
/locus_tag="SMc02835"
/db_xref="GeneID:1231790"
CDS 183920..184939
/gene="glk"
/locus_tag="SMc02835"
/EC_number="2.7.1.2"
/function="small molecule metabolism; energy metabolism,
carbon; glycolysis"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the conversion of ATP and D-glucose to
ADP and D-glucose 6-phosphate"
/codon_start=1
/transl_table=11
/product="glucokinase"
/protein_id="NP_384265.1"
/db_xref="GI:15963912"
/db_xref="GeneID:1231790"
/translation="MPNASEHSFPFPILIGDIGGTNARFALLTDAYGEPKQLAPIRTG
DFATIEEAMQKGILDKTSVQPRSAILAVAGPIKGDEIPLTNAGWVIRPKDMLAGLGLE
DVLVINDFEAQALAIAAPADQDVVQIGGGAVRPFHSRVVLGPGTGLGVAGLVYAQHTW
IPVPGEGGHVDIGPRTERDFRIWPFLEPIEGRMAGEQILCGRGIMNLYRAVCAANGEE
AVLADQAAVTTSALSGADAAAVETVSLFATYLGRVAGDMALIFMARGGVFLAGGISQK
ILPALTKPEFRAAFEDKAPHSALMRTIPTFAVIHPMAALSGLAAFARTPRDFGVAMEG
RRWRR"
misc_feature 183947..184894
/gene="glk"
/locus_tag="SMc02835"
/note="ROK family; Region: ROK; cl09121"
/db_xref="CDD:175010"
misc_feature 183968..184885
/gene="glk"
/locus_tag="SMc02835"
/note="Transcriptional regulator/sugar kinase
[Transcription / Carbohydrate transport and metabolism];
Region: NagC; COG1940"
/db_xref="CDD:32123"
gene 185048..186853
/locus_tag="SMc02836"
/db_xref="GeneID:1231791"
CDS 185048..186853
/locus_tag="SMc02836"
/function="cell processes; transport of small molecules"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_384266.1"
/db_xref="GI:15963913"
/db_xref="GeneID:1231791"
/translation="MNAKDRNKRAVDSETITGILKRVIAENGRDHIRGYAFAIACLVV
VAATTGFTAWIMEAVVNEAFANRRADIVLLICGAIFAAFVLRGLATYGQAVALSKIGN
NIVARYQRRLYAHLMALSVGYFHEHRSAQLAAKVSQNVSGIRDVLNMTVTSIARDLLT
LIGLVVVMFSKDWLLSLIVFFVAPPLLLGLRYISRRLRLATREAVEVNSRVLGAMQET
IQGITIVKAFTMENELRRKVESIIDRAENRANRIARLSERTAPMTETFAGLAISSVLA
YAAFRTIYHNVPPGAFFAFVTALLMAYDPARRLARLQVSMERAAVNARMIYEILDTVP
HQRDRPDATELRLGEATVELRDVRFAYGTGEEILKGVSFRAEGGKTTALVGPSGAGKS
TIISLIPRFYDPLSGEILIDGQNIAGVTKQSLRAGLAYVSQQPYLFEGSIRDNIRYGR
PDATDAEIEEAARLAYAHDFILAQPQGYDTPVGEHGVTLSGGQRQRLSIARALVRNAP
VLLLDEATSALDTESEAAVQKALEEAMSGRTVIVIAHRLSTVVNADKIVVMKEGIVVE
EGSHEELARRPDGLYARLHNLQGSGADTVAEAQIL"
misc_feature 185144..186820
/locus_tag="SMc02836"
/note="ABC-type multidrug transport system, ATPase and
permease components [Defense mechanisms]; Region: MdlB;
COG1132"
/db_xref="CDD:31327"
misc_feature 185150..185953
/locus_tag="SMc02836"
/note="ABC transporter transmembrane region; Region:
ABC_membrane; cl00549"
/db_xref="CDD:174279"
misc_feature 186101..186811
/locus_tag="SMc02836"
/note="MTABC3 (also known as ABCB6) is a mitochondrial
ATP-binding cassette protein involved in iron homeostasis
and one of four ABC transporters expressed in the
mitochondrial inner membrane, the other three being
MDL1(ABC7), MDL2, and ATM1. In fact, the...; Region:
ABC_MTABC3_MDL1_MDL2; cd03249"
/db_xref="CDD:73008"
misc_feature 186200..186223
/locus_tag="SMc02836"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73008"
misc_feature order(186209..186214,186218..186226,186344..186346,
186584..186589,186680..186682)
/locus_tag="SMc02836"
/note="ATP binding site; other site"
/db_xref="CDD:73008"
misc_feature 186335..186346
/locus_tag="SMc02836"
/note="Q-loop/lid; other site"
/db_xref="CDD:73008"
misc_feature 186512..186541
/locus_tag="SMc02836"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73008"
misc_feature 186572..186589
/locus_tag="SMc02836"
/note="Walker B; other site"
/db_xref="CDD:73008"
misc_feature 186596..186607
/locus_tag="SMc02836"
/note="D-loop; other site"
/db_xref="CDD:73008"
misc_feature 186668..186688
/locus_tag="SMc02836"
/note="H-loop/switch region; other site"
/db_xref="CDD:73008"
gene 186871..187689
/gene="dapB"
/locus_tag="SMc02837"
/db_xref="GeneID:1231792"
CDS 186871..187689
/gene="dapB"
/locus_tag="SMc02837"
/EC_number="1.3.1.26"
/function="small molecule metabolism; amino acid
biosynthesis; lysine"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the reduction of 2,3-dihydrodipicolinate
to 2,3,4,5-tetrahydrodipicolinate in lysine and
diaminopimelate biosynthesis"
/codon_start=1
/transl_table=11
/product="dihydrodipicolinate reductase"
/protein_id="NP_384267.1"
/db_xref="GI:15963914"
/db_xref="GeneID:1231792"
/translation="MNETDMKLVVVGAAGRMGQTLIRIIHETAGVRLHAAIERTGSPF
IGRDAGELAGAGPMGVAVTDKPLEAFVEAEGVLDFTAPAATVEFAGLAAQARIVHVVG
TTGCSADDEARIRAAARHARVIKSGNMSLGVNLLGVLTEKAARALPAGGWDIEILEMH
HKHKVDAPSGTALLLGEAAARGRGIDLADHSVRVRDGHTGARPEGSIGFATLRGGSVI
GEHSVVIAGEGEMVTLSHSATDRSIFARGAVAAALWGRSRKPGFYSMLDVLGLD"
misc_feature 186886..187683
/gene="dapB"
/locus_tag="SMc02837"
/note="dihydrodipicolinate reductase; Provisional; Region:
PRK00048"
/db_xref="CDD:166746"
misc_feature 186886..187257
/gene="dapB"
/locus_tag="SMc02837"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:176428"
misc_feature 187264..187677
/gene="dapB"
/locus_tag="SMc02837"
/note="Dihydrodipicolinate reductase, C-terminus; Region:
DapB_C; pfam05173"
/db_xref="CDD:147385"
gene 187720..188355
/gene="gpmA"
/locus_tag="SMc02838"
/db_xref="GeneID:1231793"
CDS 187720..188355
/gene="gpmA"
/locus_tag="SMc02838"
/EC_number="5.4.2.1"
/function="small molecule metabolism; energy metabolism,
carbon; glycolysis"
/inference="non-experimental evidence, no additional
details recorded"
/note="catalyzes the interconversion of 2-phosphoglycerate
to 3-phosphoglycerate"
/codon_start=1
/transl_table=11
/product="phosphoglyceromutase"
/protein_id="NP_384268.1"
/db_xref="GI:15963915"
/db_xref="GeneID:1231793"
/translation="MSGTLVLVRHGQSDWNLKNLFTGWRDPDLTELGIEEAKAGGKAL
ADYGIKFDIAFTSVLIRAQRTCQLVLDAVGQSSLETIRDQALNERDYGDLSGLNKDDA
RAKWGEEQVHIWRRSYDVPPPGGESLRDTGARVWPYYLTDILPRVLSGEKVLVAAHGN
SLRSLVMVLDKLTKEQILKLNLATGVPMVYKLNADSTVASKEVLGDMSGAH"
misc_feature 187729..188331
/gene="gpmA"
/locus_tag="SMc02838"
/note="Histidine phosphatase domain found in
phosphoglycerate mutases and related proteins, mostly
phosphatases; contains a His residue which is
phosphorylated during the reaction; Region: HP_PGM_like;
cd07067"
/db_xref="CDD:132718"
misc_feature order(187744..187749,187900..187902,188191..188196)
/gene="gpmA"
/locus_tag="SMc02838"
/note="catalytic core; other site"
/db_xref="CDD:132718"
repeat_region complement(188401..188747)
/note="this element seems to be partial or inactive;
predicted by Homology"
/mobile_element="insertion sequence:ISRm5- OR SMc04421"
gene complement(188448..>188747)
/gene="TRm5C"
/locus_tag="SMc02937"
/db_xref="GeneID:1231794"
CDS complement(188448..>188747)
/gene="TRm5C"
/locus_tag="SMc02937"
/function="elements of external origin; transposon-related
functions"
/inference="non-experimental evidence, no additional
details recorded"
/note="Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="partial transposase for insertion sequence
element ISRM5"
/protein_id="NP_384269.1"
/db_xref="GI:15963916"
/db_xref="GeneID:1231794"
/translation="VRYPRLTSWVEETIEQTLTFFRLPRQHHKHLKSTNMLERLNEEI
RRRTYVVRIFPNTESCLRLVRALAVETHENWMEANRYINMDDLREHKKLALRQAA"
misc_feature complement(188514..>188744)
/gene="TRm5C"
/locus_tag="SMc02937"
/note="Transposase, Mutator family; Region:
Transposase_mut; pfam00872"
/db_xref="CDD:109910"
repeat_region 188748..190045
/note="predicted by Homology"
/mobile_element="insertion sequence:ISRm3 OR SMc02916"
gene 188806..190008
/gene="TRm3"
/locus_tag="SMc02839"
/db_xref="GeneID:1231795"
CDS 188806..190008
/gene="TRm3"
/locus_tag="SMc02839"
/function="elements of external origin; transposon-related
functions"
/inference="non-experimental evidence, no additional
details recorded"
/note="Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="transposase ISRM3"
/protein_id="NP_384270.1"
/db_xref="GI:15963917"
/db_xref="GeneID:1231795"
/translation="MAIEKELLDQLLAGRDPSEVFGKDGLLDDLKKALSERILNAELD
DHLDVERLEGGPANRRNGSSKKTVLTGTSKMTLTIPRDRAGTFDPKLIARYQRRFPDF
DDKIISMYARGMTVREIQGHLEELYGIDVSPDLISAVTDTVLEAVGEWQNRPLELCYP
LVFFDAIRVKIRDEGFVRNKAVYVALAVLADGSKEILGLWIEQTEGAKFWLRVMNELK
NRGCQDILIAVVDGLKGFPEAITAVFPQTIVQTCIVHLIRHSLEFVSYKDRRTVVPAL
RAIYRARDAEAGLKALEAFEEGYWGQKYPAIAQSWRRNWEHVVPFFAFPEGVRRIIYT
TNAIEALNSKLRRAVRSRGHFPGDEAAMKLLYLVLNNAAEQWKRAPREWVEAKTQFAV
IFGERFFN"
misc_feature 188812..189942
/gene="TRm3"
/locus_tag="SMc02839"
/note="Transposase, Mutator family; Region:
Transposase_mut; pfam00872"
/db_xref="CDD:109910"
misc_feature 189343..189579
/gene="TRm3"
/locus_tag="SMc02839"
/note="MULE transposase domain; Region: MULE; pfam10551"
/db_xref="CDD:151094"
gene complement(190001..190951)
/gene="TRm5N"
/locus_tag="SMc02840"
/db_xref="GeneID:1231796"
CDS complement(190001..190951)
/gene="TRm5N"
/locus_tag="SMc02840"
/function="elements of external origin; transposon-related
functions"
/inference="non-experimental evidence, no additional
details recorded"
/note="Gene name confidence : putative;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="partial transposase for insertion sequence
element ISRM5"
/protein_id="NP_384271.1"
/db_xref="GI:15963918"
/db_xref="GeneID:1231796"
/translation="MTKTEGKTASAAVKDILLSNPDGLREVIRTVMQEVLEAEMDEAL
GAAKGERTPERLGYRSGHYGRTLITRVGKLELRVPQDRSGHFSTELFERYQRSERALV
ATLAEMYVQGVSTRKVKAITEELCGHAFSASSISAINKRLDESLKAFAERSLEEPFAY
LILDARYEKVREAGVVMSQAVLIAVGIDWDGRRQILSVEMAGRESRSAWKDFLVRLKG
RGLKGVELVVSDDHAGLVAAIGEVIPEAAWQRCYVHFLRNALDHLPRKHGDDCLQELR
WLYDRRDLDEAKADLAAWLGKWSVRYGTVRNSVRWAGFIS"
misc_feature complement(190022..190951)
/gene="TRm5N"
/locus_tag="SMc02840"
/note="Transposase, Mutator family; Region:
Transposase_mut; pfam00872"
/db_xref="CDD:109910"
misc_feature complement(190172..190423)
/gene="TRm5N"
/locus_tag="SMc02840"
/note="MULE transposase domain; Region: MULE; pfam10551"
/db_xref="CDD:151094"
repeat_region complement(190046..191047)
/note="this element seems to be partial or inactive;
predicted by Homology"
/mobile_element="insertion sequence:ISRm5- OR SMc04420"
repeat_region complement(191158..191215)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region 191263..191320
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region 191324..191379
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region 191382..191430
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
gene complement(191440..192312)
/locus_tag="SMc02841"
/db_xref="GeneID:1231797"
CDS complement(191440..192312)
/locus_tag="SMc02841"
/EC_number="2.1.1.63"
/function="macromolecule metabolism; macromolecule
synthesis, modification; dna - replication, repair,
restr./modif."
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative methylated-DNA--protein-cysteine
methyltransferase transcription regulator"
/protein_id="NP_384272.1"
/db_xref="GI:15963919"
/db_xref="GeneID:1231797"
/translation="MNVVTSIPTDITPEGTDYDTVRRVIAMLTEDYREQPSLESLARR
LGQSPTQLQKVFTRWAGLSPKAFLQAVTLDHAKRLLRQEDMPLLETSIEVGLSGPSRL
HDLFVTHEAMSPGEWKARGAGLTIRYGFHPSPFGTALVMVTDRGLAGLAFADSGEERA
SFEDMAARWPNATYVEDSAATARYAARIFDPDRWCAEEPLRIFLIGSDFQIRVWQTLL
QIPLGKATTYSRIAENLGQPTASRAVGAAVGRNPISFVVPCHRALGKTGDLTGYHWGL
TRKRAILGWEAGKA"
misc_feature complement(191953..192258)
/locus_tag="SMc02841"
/note="AraC-type DNA-binding domain-containing proteins
[Transcription]; Region: AraC; COG2207"
/db_xref="CDD:32389"
misc_feature complement(191449..191940)
/locus_tag="SMc02841"
/note="Methylated DNA-protein cysteine methyltransferase
[DNA replication, recombination, and repair]; Region: Ada;
COG0350"
/db_xref="CDD:30699"
misc_feature complement(191455..191688)
/locus_tag="SMc02841"
/note="The DNA repair protein O6-alkylguanine-DNA
alkyltransferase (ATase; also known as AGT, AGAT and MGMT)
reverses O6-alkylation DNA damage by transferring O6-alkyl
adducts to an active site cysteine irreversibly, without
inducing DNA strand breaks. ATases...; Region: ATase;
cd06445"
/db_xref="CDD:119438"
misc_feature complement(order(191500..191502,191521..191523,
191536..191538,191560..191562,191566..191571,
191578..191580,191584..191589,191593..191595,
191602..191604,191626..191631,191683..191688))
/locus_tag="SMc02841"
/note="DNA binding site"
/db_xref="CDD:119438"
misc_feature complement(order(191455..191457,191527..191529,
191533..191538,191629..191631))
/locus_tag="SMc02841"
/note="active site"
/db_xref="CDD:119438"
gene complement(192389..192886)
/locus_tag="SMc02842"
/db_xref="GeneID:1231798"
CDS complement(192389..192886)
/locus_tag="SMc02842"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384273.1"
/db_xref="GI:15963920"
/db_xref="GeneID:1231798"
/translation="MIKGNAAPNIDDEPIFAAELTPYRSLGYRGFKILLMIAGIMSLM
HIVVFLVIGAWPIVFFFGLDLILLFGAFWLNYHAARAREEISVSRTDVSVRKFAPSGR
MIEHRFNTFWARFSIKRHQEIGIVSMKISGGGRQTDIGSFLNRDDRETFAAAFARALA
TARSR"
misc_feature complement(192440..192886)
/locus_tag="SMc02842"
/note="Integral membrane protein (DUF2244); Region:
DUF2244; cl02302"
/db_xref="CDD:154847"
gene 192909..193700
/gene="nth"
/locus_tag="SMc02843"
/db_xref="GeneID:1231799"
CDS 192909..193700
/gene="nth"
/locus_tag="SMc02843"
/EC_number="4.2.99.18"
/function="macromolecule metabolism; macromolecule
degradation; degradation of dna"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : probable;
Gene name confidence : probable;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="endonuclease III protein"
/protein_id="NP_384274.1"
/db_xref="GI:15963921"
/db_xref="GeneID:1231799"
/translation="MKNVKLKSPPQEPKPAKATTRRTGGRTGPRSAYRTAEVEEIFRR
FSVQRPEPKGELEHVNPFTLVVAVALSAQATDAGVNKATRQLFAVADTPEKMLALGEE
RVRDYIKTIGLYRNKAKNVIALSEKLIADFGGEVPRTREELVTLPGVGRKTANVVLSM
AFGQPTMAVDTHIFRIANRIRLAPGKTPDEVEAHLLRVIPEHYLFHAHHWLILHGRYV
CKARRPECERCVIADLCKSPEKTCDIPAPLVELPPQAISVAARSR"
misc_feature 193014..193637
/gene="nth"
/locus_tag="SMc02843"
/note="Predicted EndoIII-related endonuclease [DNA
replication, recombination, and repair]; Region: Nth;
COG0177"
/db_xref="CDD:30526"
misc_feature 193092..193553
/gene="nth"
/locus_tag="SMc02843"
/note="endonuclease III; includes endonuclease III
(DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA
glycosidases (Alka-family) and other DNA glycosidases;
Region: ENDO3c; cd00056"
/db_xref="CDD:28938"
misc_feature order(193125..193133,193140..193142,193257..193259)
/gene="nth"
/locus_tag="SMc02843"
/note="minor groove reading motif; other site"
/db_xref="CDD:28938"
misc_feature 193344..193367
/gene="nth"
/locus_tag="SMc02843"
/note="helix-hairpin-helix signature motif; other site"
/db_xref="CDD:28938"
misc_feature order(193374..193376,193530..193532,193542..193544)
/gene="nth"
/locus_tag="SMc02843"
/note="substrate binding pocket; other site"
/db_xref="CDD:28938"
misc_feature 193416..193418
/gene="nth"
/locus_tag="SMc02843"
/note="active site"
/db_xref="CDD:28938"
misc_feature 193563..193613
/gene="nth"
/locus_tag="SMc02843"
/note="Iron-sulfur binding domain of endonuclease III;
Region: EndIII_4Fe-2S; pfam10576"
/db_xref="CDD:151111"
repeat_region 193727..193754
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
gene complement(193777..194370)
/locus_tag="SMc02844"
/db_xref="GeneID:1231800"
CDS complement(193777..194370)
/locus_tag="SMc02844"
/function="miscellaneous; not classified regulator"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transcription regulator protein"
/protein_id="NP_384275.1"
/db_xref="GI:15963922"
/db_xref="GeneID:1231800"
/translation="MQQRETRRSNRERSDATRTAILDAARTLFVSRGYAETATPDIVA
AAGLTRGALYHHFEDKKALFRAIVEREAREVAAMIEQLAGAPLPPREALLAGAAAYFD
AMAVPGRVRLLLLDGPAVLGVTEMAALDAAHGGRTLEEGLAAAMAPHRLEEKTVKAMA
FLLSAAFDRAALEIDAGAARADYAYAIDRLIDRLIAQ"
misc_feature complement(194179..194310)
/locus_tag="SMc02844"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:144144"
gene 194438..194863
/locus_tag="SMc02845"
/db_xref="GeneID:1231801"
CDS 194438..194863
/locus_tag="SMc02845"
/function="cell processes; protection responses;
drug/analog sensitivity and resistance"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative antibiotic resistance protein"
/protein_id="NP_384276.1"
/db_xref="GI:15963923"
/db_xref="GeneID:1231801"
/translation="MKSTSYYPVIMTQDVRQTADFYVRHLSFEALFVSDWYMHLQSTE
NEHVTLAVLDYRHETVPERHRAPVQGLLLNFEVEDPDRLYTQMREAGLPILKPICDED
FGQRHFITADPNGVMIDIIKPIPPSAEFAAAYDAKALPT"
misc_feature 194462..194797
/locus_tag="SMc02845"
/note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily; Region: Glyoxalase; cl00411"
/db_xref="CDD:174185"
gene 195004..195996
/locus_tag="SMc02846"
/db_xref="GeneID:1231802"
CDS 195004..195996
/locus_tag="SMc02846"
/function="small molecule metabolism; degradation; carbon
compounds"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative sugar kinase protein"
/protein_id="NP_384277.1"
/db_xref="GI:15963924"
/db_xref="GeneID:1231802"
/translation="MAKYDVLTIGNAIVDIIARCDDSFLEENGIIKGAMNLINADRAE
LLYSRMGPAVEASGGSAGNTAAGVASLGGRAAYFGKVADDQLGEIFTHDIRAQGVHFQ
TKPLDGHPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEDDVVAQSKVTYFEGYLW
DPPRAKDAIREAARIAHAHGRETAMTLSDSFCVHRYRSEFLELMRSGTVDIVFANRQE
ALALYETEDFDRALELLARDCKLAAVTLSEEGSVVVRGAERVRVGASVLEQVVDTTGA
GDLYAAGFLFGYTSGRSLEECSKLGNLAAGIVIGQIGPRPLVSLATAARQAALV"
misc_feature 195010..195951
/locus_tag="SMc02846"
/note="Adenosine kinase (AK) catalyzes the phosphorylation
of ribofuranosyl-containing nucleoside analogues at the
5'-hydroxyl using ATP or GTP as the phosphate donor.The
physiological function of AK is associated with the
regulation of extracellular...; Region: adenosine_kinase;
cd01168"
/db_xref="CDD:29352"
misc_feature order(195034..195036,195040..195042,195046..195048,
195106..195108,195175..195183,195190..195192,
195346..195348,195382..195384,195388..195390,
195394..195396,195475..195477,195574..195576,
195823..195828,195835..195837)
/locus_tag="SMc02846"
/note="substrate binding site; other site"
/db_xref="CDD:29352"
misc_feature order(195736..195738,195742..195747,195754..195756,
195787..195789,195793..195795,195811..195813,
195820..195822,195829..195834,195841..195843,
195916..195918,195928..195930)
/locus_tag="SMc02846"
/note="ATP binding site; other site"
/db_xref="CDD:29352"
gene 196034..196402
/locus_tag="SMc02847"
/db_xref="GeneID:1231803"
CDS 196034..196402
/locus_tag="SMc02847"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384278.1"
/db_xref="GI:15963925"
/db_xref="GeneID:1231803"
/translation="MLIILGGLPGSGKTTIARALAKRLRAVHVRVDTIEQCIRASGVP
GSVVGAAGYVTAYGVAEDNLTLGHTVIADSVNGLGVTRAAWLAVADRSAAPAVELEVV
CRTRRNIAAARKPGFPTYRV"
misc_feature 196034..>196381
/locus_tag="SMc02847"
/note="Predicted kinase [General function prediction
only]; Region: COG0645"
/db_xref="CDD:30990"
misc_feature 196037..>196126
/locus_tag="SMc02847"
/note="Nucleoside/nucleotide kinase (NK) is a protein
superfamily consisting of multiple families of enzymes
that share structural similarity and are functionally
related to the catalysis of the reversible phosphate group
transfer from nucleoside...; Region: NK; cl11962"
/db_xref="CDD:175376"
gene complement(196569..197240)
/locus_tag="SMc02848"
/db_xref="GeneID:1231804"
CDS complement(196569..197240)
/locus_tag="SMc02848"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384279.2"
/db_xref="GI:195970216"
/db_xref="GeneID:1231804"
/translation="MGNTIESRRPVRGFEKCGDLRAPGRSAPQGLSPSPAYVRKMSFV
MRHFISRVSTLTMAALLGVVLTAGTAQAQAAKGPSGLPLPRFVSLKAKSVNLRIGPSV
DYAVAFRYLKSGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTALAAPWMRSKG
EGVFVNMRRDPQGTASIVARVEPGVMLHIGECNGDWCHAETQGVEGWIAQSEIWGAYP
GEAFK"
misc_feature complement(196803..196973)
/locus_tag="SMc02848"
/note="Bacterial SH3 domain; Region: SH3_3; cl02551"
/db_xref="CDD:141512"
misc_feature complement(196596..196760)
/locus_tag="SMc02848"
/note="Bacterial SH3 domain; Region: SH3_3; cl02551"
/db_xref="CDD:141512"
gene 197325..198329
/locus_tag="SMc02849"
/db_xref="GeneID:1231805"
CDS 197325..198329
/locus_tag="SMc02849"
/EC_number="1.1.1.-"
/function="small molecule metabolism"
/inference="non-experimental evidence, no additional
details recorded"
/note="Involved in the metabolism of aromatic amino acids"
/codon_start=1
/transl_table=11
/product="2-hydroxyacid dehydrogenase"
/protein_id="NP_384280.1"
/db_xref="GI:15963927"
/db_xref="GeneID:1231805"
/translation="MTSKKKPTVYITRKLPDVVETRMRELFDAELNIDDTPRSQPELV
AAVKRADVLVPTVTDRIDAALIEQAGPQLKLIAAFSNGVDNIDVDAAARKGITVTNTP
NVLTEDTADMTMALILAVPRRLAEGAQVLTDRKGEWAGWSPTWMLGRRIAGKRIGIVG
MGRIGTAVARRAKAFGLSIHYHNRHRVKPETEEMLEATYWDSLDQMLARVDIVSVNCP
STPATYHLLSARRLALMRPDSYIVNTARGGIIDEAALIKSLREGKIAGAGLDVFENEP
CVNPKLIKLAGEGKVVLLPHMSSATLEGRIDMGEKVVINIRTFFDGHRPPDRVLPGRD"
misc_feature 197337..198320
/locus_tag="SMc02849"
/note="Lactate dehydrogenase and related dehydrogenases
[Energy production and conversion / Coenzyme metabolism /
General function prediction only]; Region: LdhA; COG1052"
/db_xref="CDD:31252"
misc_feature 197664..198218
/locus_tag="SMc02849"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:176428"
repeat_region complement(198402..198471)
/inference="non-experimental evidence, no additional
details recorded"
/note="Sm-4 OR SMc04583;
REPEAT SM-4;
predicted by Homology"
gene complement(198469..201483)
/gene="polA"
/locus_tag="SMc02850"
/db_xref="GeneID:1231806"
CDS complement(198469..201483)
/gene="polA"
/locus_tag="SMc02850"
/EC_number="2.7.7.7"
/function="macromolecule metabolism; macromolecule
synthesis, modification; dna - replication, repair,
restr./modif."
/inference="non-experimental evidence, no additional
details recorded"
/note="has 3'-5' exonuclease, 5'-3' exonuclease and
5'-3'polymerase activities, primarily functions to fill
gaps during DNA replication and repair"
/codon_start=1
/transl_table=11
/product="DNA polymerase I"
/protein_id="NP_384281.1"
/db_xref="GI:15963928"
/db_xref="GeneID:1231806"
/translation="MKNGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNM
LWKLLTDARDTSVGVTPTHLAVIFDYSSKTFRNGLYDQYKANRTAPPEDLIPQFGLIR
HATRAFNLPCIEKEGYEADDLIATYARLAEEAGADVTIVSSDKDLMQLVTPKVSMYDS
MKDKQITVPDVIEKWGVPPEKMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLD
TLLARAGEIKQQKRRESIIANADLARLSRELVTLKKDTPLDVPPEDFRLDSQDGPKLI
AFLKAMEFTTLTRRVAAATDTDAEAIEPAHVPVEWGAQAHGPDLDVGEAGGPPPSPQS
SSATPPRGNAARAAVSFLSSGQDADTTGATPTGLAEARAAYFGKAPFDHSGYRTIRDI
DTLERWIADAREAGLVGFDTQATSPDAMRADLVGFSLAVADYANDPSGSRIRAAYVPL
AHKSGVSDLLGGGPVDSQVPGRETLSRLKELLEDPSVLKVGQNLKYGYLVMKRHGIAM
RSFDDTMLMSYVLDAGNGAHGMDSLAERWLGHTPIAYKDVTGTGRSSLTFDFVDIDKA
TAYAAEDADIALRLWHVLKPRLAAKGLTRVYERLERPLISVLAGMEERGITVDRQILS
RLSGELAQGAAALEDEIYRLAGETFTIGSPKQLGDILFGKMGLPGGSKTKTGQWSTSA
QVLEDLAAAGHDLPRKIVDWRQLTKLKSTYTDALPGFVHPETKRVHTCFAMAATTTGR
LSSSDPNLQNIPIRTGEGRKIRTAFVATPGHKLVSADYSQIELRVLAHVADIPQLRQA
FADGVDIHAMTASEMFGVPVDGMPSEIRRRAKAINFGIIYGISAFGLANQLSIERSEA
GDYIKRYFERFPGIRDYMENTKAFARENGYVETIFGRRAHYPDIRSSNPSMRAFNERA
SINAPIQGSAADIIRRAMVKMEPALEAAKLSARMLLQVHDELIFEVEDGEIERTIPVI
ISVMENAAMPALDMRVPLKVDARAAHNWDEAH"
misc_feature complement(200683..201471)
/gene="polA"
/locus_tag="SMc02850"
/note="5'-3' exonuclease; Region: 53EXOc; smart00475"
/db_xref="CDD:128751"
misc_feature complement(200728..201468)
/gene="polA"
/locus_tag="SMc02850"
/note="5'-3' exonuclease; T5 type 5'-3' exonuclease
domains may co-occur with DNA polymerase I (Pol I)
domains, or be part of Pol I containing complexes. They
digest dsDNA and ssDNA, releasing mono-,di- and
tri-nucleotides, as well as oligonucleotides, and...;
Region: 53EXOc; cd00008"
/db_xref="CDD:28892"
misc_feature complement(order(201052..201054,201121..201123,
201127..201129,201277..201279,201451..201453))
/gene="polA"
/locus_tag="SMc02850"
/note="metal binding site I; metal-binding site"
/db_xref="CDD:28892"
misc_feature complement(order(201211..201213,201220..201267))
/gene="polA"
/locus_tag="SMc02850"
/note="putative ssDNA interaction site; other site"
/db_xref="CDD:28892"
misc_feature complement(order(200902..200904,200911..200913,
201046..201048,201052..201054))
/gene="polA"
/locus_tag="SMc02850"
/note="metal binding site II; metal-binding site"
/db_xref="CDD:28892"
misc_feature complement(198472..200334)
/gene="polA"
/locus_tag="SMc02850"
/note="DNA polymerase I - 3'-5' exonuclease and polymerase
domains [DNA replication, recombination, and repair];
Region: PolA; COG0749"
/db_xref="CDD:31092"
misc_feature complement(199657..200283)
/gene="polA"
/locus_tag="SMc02850"
/note="The 3'-5' exonuclease domain of DNA polymerases has
a fundamental role in reducing polymerase errors and is
involved in proofreading activity. E.coli-like Polymerase
I (pol I), a subgroup of family-A DNA polymerases,
contains a DEDDy-type DnaQ-like 3...; Region:
DNA_polA_I_Ecoli_like_exo; cd06139"
/db_xref="CDD:99842"
misc_feature complement(order(199765..199767,199777..199779,
199846..199851,199894..199899,199993..200001,
200005..200010,200233..200235,200242..200253))
/gene="polA"
/locus_tag="SMc02850"
/note="active site"
/db_xref="CDD:99842"
misc_feature complement(order(199765..199767,199777..199779,
199993..199995,200245..200247,200251..200253))
/gene="polA"
/locus_tag="SMc02850"
/note="catalytic site; other site"
/db_xref="CDD:99842"
misc_feature complement(order(199765..199767,199777..199779,
199846..199851,199894..199899,199996..200001,
200005..200010,200233..200235,200242..200250))
/gene="polA"
/locus_tag="SMc02850"
/note="substrate binding site; other site"
/db_xref="CDD:99842"
misc_feature complement(198478..199632)
/gene="polA"
/locus_tag="SMc02850"
/note="DNA polymerase family A, 5'-3' polymerase domain.
Family A polymerase (polymerase I) functions primarily to
fill DNA gaps that arise during DNA repair, recombination
and replication. DNA-dependent DNA polymerases can be
classified into six main groups...; Region: DNA_pol_A;
cd06444"
/db_xref="CDD:119395"
misc_feature complement(order(198619..198630,198721..198723,
198733..198735,198745..198747,198799..198801,
198952..198954,198961..198963,198970..198972,
198979..198984,198994..198996,199006..199008,
199066..199068,199138..199155,199231..199236,
199243..199245,199249..199251,199255..199260,
199264..199266,199273..199278,199348..199350,
199363..199365,199375..199377,199525..199527,
199534..199536))
/gene="polA"
/locus_tag="SMc02850"
/note="active site"
/db_xref="CDD:119395"
misc_feature complement(order(198622..198630,198721..198723,
198733..198735,198745..198747,198799..198801,
198952..198954,198961..198963,198970..198972,
198979..198981,199231..199236,199243..199245,
199249..199251,199255..199260,199264..199266,
199273..199278,199348..199350,199363..199365,
199375..199377,199525..199527,199534..199536))
/gene="polA"
/locus_tag="SMc02850"
/note="DNA binding site"
/db_xref="CDD:119395"
misc_feature complement(order(198619..198627,198721..198723,
198733..198735,198982..198984,198994..198996,
199006..199008,199066..199068,199138..199155,
199264..199266))
/gene="polA"
/locus_tag="SMc02850"
/note="catalytic site; other site"
/db_xref="CDD:119395"
gene 201956..202399
/locus_tag="SMc02851"
/db_xref="GeneID:1231807"
CDS 201956..202399
/locus_tag="SMc02851"
/function="miscellaneous; not classified regulator"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative transcription regulator protein"
/protein_id="NP_384282.1"
/db_xref="GI:15963929"
/db_xref="GeneID:1231807"
/translation="MAFNRMESATYLASLLARGFSRALQERGQKLGFAPGQFPVLLEL
WSEEGLTQRQLLDRLDIEQATMANTLARMERDGLIVRRKHPNDKRSQQIFLTERARKM
EAAAKEAAAAAEQSLLSGFRRFEKELMLQYMRMALANTARHGDAS"
misc_feature 202031..>202243
/locus_tag="SMc02851"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cl00088"
/db_xref="CDD:173998"
gene 202498..203892
/locus_tag="SMc02852"
/db_xref="GeneID:1231808"
CDS 202498..203892
/locus_tag="SMc02852"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384283.1"
/db_xref="GI:15963930"
/db_xref="GeneID:1231808"
/translation="MMADITPVLERADANLPQSLERLFDLVRIKSISTDPAFKAECRK
AAEWLVAELGTLGFEASVRDTPGHPMVVAHHAAGKADAPHLLFYGHYDVQPVDPLNLW
ETPPFEPSLREVEPGRKIITGRGTADDKGQLMTFVEAVRAYKEARGVLPCRITILFEG
EEESGSPSLKPFLEANAGELKADYALVCDTSMWDRETPAISAGLRGLVGEEVVVKAAD
RDLHSGYFGGAAANPIHILAEILAGLHDETGRVTLDDFYEGVEETPAEIKATWETLGQ
TAEKFLGEIGLSIPSGERGRSVLELTWARPTAEINGITGGYTGEGFKTVIAAEASAKV
SFRLVGKQDPARIRESFRAYVRSKIPADCSIEFHAHGGSPAIHLPYDSALLTTAKAAL
SDEWPKPAVVIGMGGSIPIVGDFQRMLGMESLLVGFGLSDDRIHSPNEKYELTSFHKG
IRSWVRILDALGTR"
misc_feature 202498..203889
/locus_tag="SMc02852"
/note="Peptidase dimerization domain; Region: M20_dimer;
cl09126"
/db_xref="CDD:175013"
misc_feature 202510..203883
/locus_tag="SMc02852"
/note="Acetylornithine
deacetylase/Succinyl-diaminopimelate desuccinylase and
related deacylases [Amino acid transport and metabolism];
Region: ArgE; COG0624"
/db_xref="CDD:30969"
gene 204256..205203
/locus_tag="SMc02853"
/db_xref="GeneID:1231809"
CDS 204256..205203
/locus_tag="SMc02853"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384284.1"
/db_xref="GI:15963931"
/db_xref="GeneID:1231809"
/translation="MKRLKAYFWPVVGLAAILISVRALVDELRGLSLNEFLASFQAIS
LESWLLAIGSTLVAYAALAAYDRLALDHLGHRISLWFITLCSFTTYALSHNLGASVFS
GAVVRYRAYRSKGLTPGEVGVLVAFCSFTFTLGTLMLSAIVLLLRPNIIERFSEFLPI
EMSLTTGCLILALIALYVLGSLVGMRPLRTRWFQLHYPRPSIVLRQLIIAPVELLGAA
GIIYFALPEAGNPGYVVILGIFLASFSAALLSHAPGGIGVLEFVFIAALPEMDPADVL
AALAIFRLLYLLVPFVMALVVILVFEHSRFLAERGAKEP"
misc_feature 204268..205191
/locus_tag="SMc02853"
/note="Predicted integral membrane protein [Function
unknown]; Region: COG0392"
/db_xref="CDD:30741"
misc_feature 204337..205140
/locus_tag="SMc02853"
/note="Uncharacterized protein family (UPF0104); Region:
UPF0104; cl04219"
/db_xref="CDD:164051"
gene complement(205270..205761)
/locus_tag="SMc02854"
/db_xref="GeneID:1231810"
CDS complement(205270..205761)
/locus_tag="SMc02854"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative signal peptide protein"
/protein_id="NP_384285.1"
/db_xref="GI:15963932"
/db_xref="GeneID:1231810"
/translation="MRIRCTALIALAALAAQGIEARAQEEFPYVDDRSDGAALVRSLY
NAINRKEYARAYGYFGASRPVGEFKAFADGYAKTVSVEAKFGKVLTEGAAGSIYSAVP
VAIKSIEEGGKARFFSGCYVTRIINPSLQVPPFTPYQIETARLDEAEGPIEEAIPATC
NVP"
gene complement(205860..206783)
/locus_tag="SMc02855"
/db_xref="GeneID:1231811"
CDS complement(205860..206783)
/locus_tag="SMc02855"
/function="miscellaneous; hypothetical/global homology"
/inference="non-experimental evidence, no additional
details recorded"
/note="Product confidence : hypothetical;
Gene name confidence : hypothetical;
predicted by Codon_usage;
predicted by Homology;
predicted by FrameD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384286.1"
/db_xref="GI:15963933"
/db_xref="GeneID:1231811"
/translation="MAAAAKRVYHHPMRSKTNGYVFALLAIVIFSIQDGISKHLGAIY
PPVFVAMIRYWAFAGFAAAIAARAPGGFAATAVTRKPLIQLLRGVLLPVQIVVVITSF
TIVGLAHSQAILAATPLFVALLSMPLLGERVGWRRWSAIAVGLLGVLLILRPEDGSFD
LNFLLPLAAAVMFAFYVITTRLASREDSAMTSFFYTGIVGAFAISLVGPFFWATLSGA
DWVWMVLLCITGTSSHYFLIRAYDMLDAAAVQPLTYLQLVFASIMGVTIFGETLTTGM
IIGSVLVVAAGIFTLWREHVVGRQKSRLPPR"
misc_feature complement(205908..206273)
/locus_tag="SMc02855"
/note="EamA-like transporter family; Region: EamA;
cl01037"
/db_xref="CDD:154161"
gene 207244..209547
/locus_tag="SMc02856"
/db_xref="GeneID:1231812"
CDS 207244..209547
/locus_tag="SMc02856"
/function="structural elements; cell envelope; murein
sacculus, peptidoglycan"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="putative penicillin-binding protein"
/protein_id="NP_384287.1"
/db_xref="GI:15963934"
/db_xref="GeneID:1231812"
/translation="MGTRSGPKGIFPSGMASGKSGQRIEPSFGGNDGDGGDLRVDASD
RVAGGGSKPRRAKSPERGAKREKRGRRAGGRGSGRSGSGGGFFGLVRRLAYWCVVLGI
WGAIGVGGLVLYYGARMPSATSWSIPERPPNVKILAANGDIIANRGATGGEAVALEDM
SPYIPQAVIAIEDRRFYSHFGVDPLGLARAMLTNVMSGRMVQGGSTLTQQLAKNLFLS
PERTLERKVQEVLLAFWLEQKYTKDQILAMYLNRVFFGSNAYGVEAASRRYFNKSARD
VNLGEAALLAGLLKAPSRLSPARDPEAAEERAQLVLGAMREEGFISDSEIKTAMSQAP
TRAKSFWSGAEHYVADMVMDQVPGMIGEVTQDLVIDTTIDLTLEKKAEEVLAERLETE
GGKLNASQAALVSIDGTGAIRALVGGRDYAESQFDRASKAKRQPGSAFKPFVYAAALE
IGRTPMSVRNDAPVRIGNWTPENYDQKYRGEVTLADALANSLNTIAAQLVMEVGPQNV
VKLAHRLGIDSDMQANASIALGTSEVTLVELTSSYAPFMNGGFKATPHVIRRISTADG
TVLYENTYDNPPRVLDPAIVSEMNRMMVRVLTDGTGKNARLPGWEAAGKTGTTQSFRD
ALFVGYTSNLATGIWFGNDDGKFMKKVTGGGLPARAWHDFMVAAHEGLSPSPLFGTTG
VQPVFDEGGIAAAGEMPADGFDAGSPDVFPERPAGMDGVESMDGMAAVDQVRPAEQAG
GPIPPAGVGETTGGTRRTTLFDLLTGG"
misc_feature 207661..208191
/locus_tag="SMc02856"
/note="Transglycosylase; Region: Transgly; cl07896"
/db_xref="CDD:174884"
misc_feature 207697..209256
/locus_tag="SMc02856"
/note="penicillin-binding protein, 1A family; Region:
PBP_1a_fam; TIGR02074"
/db_xref="CDD:162686"
misc_feature 208444..209136
/locus_tag="SMc02856"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; cl01039"
/db_xref="CDD:154162"
gene 209764..211689
/gene="dnaK"
/locus_tag="SMc02857"
/db_xref="GeneID:1231813"
CDS 209764..211689
/gene="dnaK"
/locus_tag="SMc02857"
/function="cell processes; chaperoning"
/inference="non-experimental evidence, no additional
details recorded"
/note="heat shock protein 70; assists in folding of
nascent polypeptide chains; refolding of misfolded
proteins; utilizes ATPase activity to help fold;
co-chaperones are DnaJ and GrpE; multiple copies in some
bacteria"
/codon_start=1
/transl_table=11
/product="molecular chaperone DnaK"
/protein_id="NP_384288.1"
/db_xref="GI:15963935"
/db_xref="GeneID:1231813"
/translation="MAKVIGIDLGTTNSCVSVMDGKDAKVIENAEGARTTPSMVAFTE
DGERLVGQPAKRQAVTNPENTLFAIKRLIGRTFEDPTTQKDKGMVPYKIVKADNGDAW
VEAHGTSYSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKI
AGLDVLRIINEPTAAALAYGLDKKEGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNG
DTFLGGEDFDMRLVEYLASEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEI
NLPFITADASGPKHLTMKLSRAKFESLVEDLIQKTIAPCKAALKDAGVSAAEIDEVVL
VGGMTRMPKVQETVKQLFGKEPHKGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPL
SLGIETLGGVFTRLIERNTTIPTKKSQVFSTADDNQSAVTIRVSQGEREMAADNKLLG
QFDLVGIPPAPRGVPQIEVTFDIDANGIVQVSAKDKGTGKEHQIRIQASGGLSDAEIE
KMVKDAEANAEADKKRREGVEAKNQAESLVHSSEKSLQEHGDKVSETDRKAIEDAIAA
LKSAVEVSEPDAEDIKAKTNTLMEVSMKLGQAIYEAQQTDAAHADAAADAKRSGDDVV
DADYEEVKDEDDRKRSA"
misc_feature 209764..211668
/gene="dnaK"
/locus_tag="SMc02857"
/note="molecular chaperone DnaK; Provisional; Region:
dnaK; PRK00290"
/db_xref="CDD:166891"
gene 211964..213103
/gene="dnaJ"
/locus_tag="SMc02858"
/db_xref="GeneID:1231814"
CDS 211964..213103
/gene="dnaJ"
/locus_tag="SMc02858"
/function="cell processes; chaperoning"
/inference="non-experimental evidence, no additional
details recorded"
/note="chaperone Hsp40; co-chaperone with DnaK;
Participates actively in the response to hyperosmotic and
heat shock by preventing the aggregation of
stress-denatured proteins and by disaggregating proteins,
also in an autonomous, dnaK-independent fashion"
/codon_start=1
/transl_table=11
/product="chaperone protein DnaJ"
/protein_id="NP_384289.1"
/db_xref="GI:15963936"
/db_xref="GeneID:1231814"
/translation="MKRDLYETLGVQKNADEKELKSAFRKLAMKYHPDRNPGDQESEK
SFKEINEAYETLKDPQKRAAYDRYGHAAFEQGGMGAGFGNGFAGGGAHGFSDIFEDIF
GEMMGGRQRRSSGGRERGADLRYNMEISLEEAYSGKTAQIRVPTSITCDVCTGTGAKP
GTSPKTCGTCQGTGRVRAAQGFFSIERTCPTCGGRGQTIADPCTKCHGQGRVVEERTL
SVNIPAGIEDGTRIRLSGEGEAGLRGGPAGDLYIFLSVKPHEFYQRDGADLYCAVPIS
MTTAALGGKFDVTTLDGTKSRVTVPEGTQAGKQFRLKGKGMPVLRSSQTGDLYIQIQI
ETPQKLTKRQRELLQEFEQISSKENNPESTGFFSRMKDFFDTLSE"
misc_feature 211964..213088
/gene="dnaJ"
/locus_tag="SMc02858"
/note="chaperone protein DnaJ; Provisional; Region:
PRK10767"
/db_xref="CDD:170698"
misc_feature 211973..212137
/gene="dnaJ"
/locus_tag="SMc02858"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of...; Region: DnaJ;
cd06257"
/db_xref="CDD:99751"
misc_feature order(212057..212065,212090..212092,212099..212104,
212111..212116)
/gene="dnaJ"
/locus_tag="SMc02858"
/note="HSP70 interaction site; other site"
/db_xref="CDD:99751"
misc_feature <212609..212734
/gene="dnaJ"
/locus_tag="SMc02858"
/note="DnaJ C terminal region; Region: DnaJ_C; pfam01556"
/db_xref="CDD:144958"
misc_feature 212705..213004
/gene="dnaJ"
/locus_tag="SMc02858"
/note="DnaJ C terminal region; Region: DnaJ_C; pfam01556"
/db_xref="CDD:144958"
repeat_region complement(213133..213194)
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
repeat_region 213208..213256
/inference="non-experimental evidence, no additional
details recorded"
/note="REP (repetitive extragenic palindromic) element;
predicted by Homology"
gene complement(213276..214160)
/locus_tag="SMc02859"
/db_xref="GeneID:1231815"
CDS complement(213276..214160)
/locus_tag="SMc02859"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384290.1"
/db_xref="GI:15963937"
/db_xref="GeneID:1231815"
/translation="MPPDTALESLLRRDRAIVAASLVALTVVAWTYTLWLAAAMNIDG
MSMSAPGMEADMKMDPAMDMDGMEMGSRGALSLGTVLGISPRPWSSVEAGVTLTMWIV
MMVGMMLPSATPMILLYARVGRQSRIAGKPFAATGFFAGGYLLAWAGFALVATLGQWL
MEGTLLTPALASASRIFSGVVLVIAGLYQWTSLKDACLSQCQTPIVFLQRHGGFRRDP
AGAVGLGLRHGVYCIGCCWALMTLLFVGGIMNVLWIAAIAIFVLAEKVIPTGRVLSRV
AGSLLAAFGLWQLISASI"
misc_feature complement(213282..214160)
/locus_tag="SMc02859"
/note="Predicted metal-binding integral membrane protein
(DUF2182); Region: DUF2182; cl09233"
/db_xref="CDD:158463"
gene complement(214165..214800)
/locus_tag="SMc02860"
/db_xref="GeneID:1231816"
CDS complement(214165..214800)
/locus_tag="SMc02860"
/function="miscellaneous; hypothetical/partial homology"
/inference="non-experimental evidence, no additional
details recorded"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_384291.1"
/db_xref="GI:15963938"
/db_xref="GeneID: 