LOCUS NC_011728 906707 bp DNA circular BCT 16-AUG-2011
DEFINITION Borrelia burgdorferi ZS7, complete genome.
ACCESSION NC_011728
VERSION NC_011728.1 GI:218249165
DBLINK Project: 59429
BioProject: PRJNA59429
KEYWORDS .
SOURCE Borrelia burgdorferi ZS7
ORGANISM Borrelia burgdorferi ZS7
Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Borrelia;
Borrelia burgdorferi group.
REFERENCE 1 (bases 1 to 906707)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (17-DEC-2008) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 2 (bases 1 to 906707)
AUTHORS Fraser-Liggett,C.M., Mongodin,E.F., Casjens,B., Dunn,J., Luft,B.,
Qiu,W., Schutzer,S. and Ouyang,S.
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2008) J. Craig Venter Institute, 9704 Medical
Center Drive, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP001205.
The DNA or cells for this strains can be obtained from Sherwood
Casjens (Univ. of Utah, sherwood.casjens@path.utah.edu) or Benjamin
J. Luft (SUNY at Stony Brook, bluft@notes.cc.sunysb.edu).
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..906707
/organism="Borrelia burgdorferi ZS7"
/mol_type="genomic DNA"
/strain="ZS7"
/db_xref="taxon:445985"
gene 57..629
/locus_tag="BbuZS7_0001"
/db_xref="GeneID:7106702"
CDS 57..629
/locus_tag="BbuZS7_0001"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374535.1"
/db_xref="GI:218249783"
/db_xref="GeneID:7106702"
/translation="MILMKYSAILLICSVNLFCFQNKLTTSRWEFPKEDLIKKKIKIG
IIYHNYINSIFYNENYKYIAFIGILTSYNEWIEIQFSPINFFTIPTNKDFISNTYFNL
AFTIYITKYSILTDTLAIKFFIGTQIDLTLRTTIFTGKTTHAFLYPILPIITFKFEID
FIPNNYSIYYKLSTSFKEFILLDLGISIFI"
gene complement(720..1748)
/locus_tag="BbuZS7_0002"
/db_xref="GeneID:7106160"
CDS complement(720..1748)
/locus_tag="BbuZS7_0002"
/note="identified by match to protein family HMM PF00933"
/codon_start=1
/transl_table=11
/product="glycosyl hydrolase family 3"
/protein_id="YP_002374536.1"
/db_xref="GI:218249731"
/db_xref="GeneID:7106160"
/translation="MDFLKTFSFLFFSFFCLNLIAIESLPEIDYEYFNKDKSDLVDLI
KFLGELDFQTILKDRNLFIGIRNLTNFKNVQELNIDDINRIKKINPIGIILFRENLKD
AEQTKGLINAIKSHIGHDIFIAIDEEGGIVSRASENKKMGVYNFPAMEHVGGVKDLHL
IYKIGEVLAKQLRRLGINLNMAPVADIKFAPHTPLLNRTFGGYSAYNIGLMVEAFIDG
MQNNGVFSAIKHFPGLGGTTTDTHKYLAFLPYSKSFLMLNNFVPFVFGRAAKFIMIGH
VNVPKISKDITSMSKSIVNIIRENLNITSIMMTDSYDMGAITRSFSNIENAIKKSLSS
GVNIVLIP"
misc_feature complement(<723..1475)
/locus_tag="BbuZS7_0002"
/note="Beta-glucosidase-related glycosidases [Carbohydrate
transport and metabolism]; Region: BglX; COG1472"
/db_xref="CDD:31661"
misc_feature complement(723..1439)
/locus_tag="BbuZS7_0002"
/note="Glycosyl hydrolase family 3 N terminal domain;
Region: Glyco_hydro_3; cl07971"
/db_xref="CDD:208801"
gene complement(1736..3202)
/locus_tag="BbuZS7_0003"
/db_xref="GeneID:7106904"
CDS complement(1736..3202)
/locus_tag="BbuZS7_0003"
/note="identified by glimmer"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374537.1"
/db_xref="GI:218249628"
/db_xref="GeneID:7106904"
/translation="MNVKVDKIFSEMILEKLNSGEICPNNFESIKYFPCDSHENIFNI
SDEILRFKFNKGLVEDNLKKYFHDFSKFLQSEEGDYYIFSSCDLENLGLMLFPYLSFG
ILNGGSATSYFDLAKNRALNEDLYMLYESKILEFKEKFGEFPKGITPAYINKDGSFGF
SFLALKIRHLLMVAKRYESFCGKMIKPSIFQMTSCKTDEFISKSLDDLFADDLIKSVN
FCNLKKEDVFTAVQPLVYCYEKLNSSNYQYFTLKDNKNANSILALPAGHGQNFKILKD
IYLKLYESGKRFIYIGNVDNMGFTINFKALALMALTNCSSGFEFSFKSKADFKGGILA
VNGENRLTCVDIGGGISSEIVQEFENKGNRLLFNCATGLFNLEYLIKNIDEIIEKMPI
RIIEQDKEIGKYISVEQITWEVLKLIENPLILTVDRNRRFLPAKLFINMLLNSNLEDI
CGYCCKKGIDNSAKNFSALPDLLSKDYGLLCGLYKWTF"
misc_feature complement(1739..3082)
/locus_tag="BbuZS7_0003"
/note="UDP-glucose pyrophosphorylase [Carbohydrate
transport and metabolism]; Region: COG4284"
/db_xref="CDD:34006"
misc_feature complement(1853..>2413)
/locus_tag="BbuZS7_0003"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:212311"
gene 3348..5141
/locus_tag="BbuZS7_0004"
/db_xref="GeneID:7106087"
CDS 3348..5141
/locus_tag="BbuZS7_0004"
/note="identified by match to protein family HMM PF02878"
/codon_start=1
/transl_table=11
/product="phosphoglucomutase"
/protein_id="YP_002374538.1"
/db_xref="GI:218249204"
/db_xref="GeneID:7106087"
/translation="MLKQYSLNMKNFKKAFDEMIFSPSGFRKIFAKSKNEDSTENEIN
NEDKALIALIIFTISNYFKNESKPYIGLGLDSRPTGNIIAEITIKILITNKEKIGFFG
ILPITEILAYTKNSKDSKGFIYISASHNPIGYNGIKIGLNDGGVLNSAKANEIIQQIK
NNSQNEKLINHLINTINKFDEDKSNLEHYNKIIKLERKNKNQSYEAYKSLIHEIAYEN
DINNKNIEILKKRILKNPIGIIAEMNGSSRINSIDKELIESLGLKVKLYNDEIGIFKH
SIIPEGKSLNECKKLLQNKYIQDNSFELGYVPDCDGDRGNLVFIDKATNTANIIEAQK
IFALVVISELSYLYYTGIKNNIAIVTNDATSLNIEKIANFFNAKVYRVEVGEANLTEM
ADDLRAQGLIVKISGEGSNGGCIIHPSRVRDPITTLLSIVKLLKMKELYQIWCKLSKN
HYKEKYDLKDILNTTNFYSNVIVSSKKANLTNLKIENQEILKSNYENLLIKEIKSNKL
FQELSVVDYEIINYEGKRQSKIRTGDSSGGLKVLLKTNKEIVATLWMRISKTEPVTRV
LSEVIYTKRNILFKLLEFNKKLIKKANLPNN"
misc_feature 3384..5135
/locus_tag="BbuZS7_0004"
/note="Phosphomannomutase [Carbohydrate transport and
metabolism]; Region: {ManB}; COG1109"
/db_xref="CDD:31306"
misc_feature 3405..>4625
/locus_tag="BbuZS7_0004"
/note="The alpha-D-phosphohexomutase superfamily includes
several related enzymes that catalyze a reversible
intramolecular phosphoryl transfer on their sugar
substrates. Members of this family include the
phosphoglucomutases (PGM1 and PGM2),
phosphoglucosamine...; Region: phosphohexomutase; cl03757"
/db_xref="CDD:208029"
misc_feature order(3411..3413,3417..3419,3426..3428,3729..3737,
3759..3761,4272..4274,4278..4280,4284..4289,4434..4436,
4497..4505,4569..4571,4578..4580,4584..4586)
/locus_tag="BbuZS7_0004"
/note="active site"
/db_xref="CDD:100086"
misc_feature order(3417..3419,3729..3731,4287..4289,4434..4436,
4497..4499,4503..4505,4569..4571,4578..4580,4584..4586)
/locus_tag="BbuZS7_0004"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100086"
misc_feature order(3729..3731,4272..4274,4278..4280,4284..4286)
/locus_tag="BbuZS7_0004"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:100086"
gene complement(5204..6259)
/gene="trpS"
/locus_tag="BbuZS7_0005"
/db_xref="GeneID:7106743"
CDS complement(5204..6259)
/gene="trpS"
/locus_tag="BbuZS7_0005"
/EC_number="6.1.1.2"
/note="catalyzes a two-step reaction, first charging a
tryptophan molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="tryptophanyl-tRNA synthetase"
/protein_id="YP_002374539.1"
/db_xref="GI:218249523"
/db_xref="GeneID:7106743"
/translation="MKRKVMLTGDRPTGALHLGHYVGSVVNRLKFQEEYETYFIIADL
HTLTTKPDLKSINTIPSNVREMVLDYLACGINPDKVSIYLQSAIPELFELHLIFSMIV
TVARLQRIPSIKDMSIAAGLKEIPYGLLGYPVLMSADILMTKANLVPVGRDNESHIEF
ARELARRFNHLYKNNFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDDENLLEK
KIMSMYTDPNRIRADIPGNVEGNPVFIYHSFFNSNHEEVEDLKSRYKKGKVGDVEVKK
KLFLALNSFLKPIRDKRSFYEAKKKDYIDEIIFDGTSKARFIANKVVKDVKDLIGLSK
TWNGIKYSAEKKLKNEE"
misc_feature complement(5261..6256)
/gene="trpS"
/locus_tag="BbuZS7_0005"
/note="tryptophanyl-tRNA synthetase II; Reviewed; Region:
PRK12282"
/db_xref="CDD:183400"
misc_feature complement(5477..6244)
/gene="trpS"
/locus_tag="BbuZS7_0005"
/note="catalytic core domain of tryptophanyl-tRNA
synthetase; Region: TrpRS_core; cd00806"
/db_xref="CDD:173903"
misc_feature complement(order(5657..5659,5663..5668,5693..5695,
5789..5791,5798..5803,5807..5812,5816..5818,5843..5845,
5852..5854,5864..5866,6005..6007,6125..6127,6140..6142,
6191..6193,6200..6205,6209..6211,6227..6241))
/gene="trpS"
/locus_tag="BbuZS7_0005"
/note="active site"
/db_xref="CDD:173903"
misc_feature complement(6200..6211)
/gene="trpS"
/locus_tag="BbuZS7_0005"
/note="HIGH motif; other site"
/db_xref="CDD:173903"
misc_feature complement(order(5855..5860,5867..5872,5876..5878,
5936..5941,5945..5956,5960..5965,5972..5980,5984..5989,
6116..6121,6128..6130))
/gene="trpS"
/locus_tag="BbuZS7_0005"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:173903"
misc_feature complement(5654..5668)
/gene="trpS"
/locus_tag="BbuZS7_0005"
/note="KMSKS motif; other site"
/db_xref="CDD:173903"
gene complement(6262..7350)
/locus_tag="BbuZS7_0006"
/db_xref="GeneID:7106600"
CDS complement(6262..7350)
/locus_tag="BbuZS7_0006"
/note="identified by match to protein family HMM PF01594"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374540.1"
/db_xref="GI:218249870"
/db_xref="GeneID:7106600"
/translation="MLKDLNTNQGLKPWRVESVFYCIVIVLIFIGAFKIAEAVFKPLA
ISIVLGFLVYPVYTFLARFKVPKFLIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPY
YQNQLAFIMKDVLSRYKVDSSVINDVNFSGYIYPFLTRAYNEIIGFTSSLVVVFLLLY
FLLSEIHVFEMKLDKAFKKPISTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGL
TLFGQDFPLVWAVLSFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYVFIYNTSI
QMLIGNILEPKMQGKRLDISPFLLLCFLFFWGWLWGIVGLLISYPFTVIVKVIVDNVS
WLKSFSVFLGGSEILSNISHISSKDKEI"
misc_feature complement(6319..7350)
/locus_tag="BbuZS7_0006"
/note="pheromone autoinducer 2 transporter; Reviewed;
Region: tqsA; cl00465"
/db_xref="CDD:207060"
misc_feature complement(6355..7305)
/locus_tag="BbuZS7_0006"
/note="Domain of unknown function DUF20; Region: UPF0118;
pfam01594"
/db_xref="CDD:201878"
gene complement(7411..8268)
/locus_tag="BbuZS7_0007"
/db_xref="GeneID:7106330"
CDS complement(7411..8268)
/locus_tag="BbuZS7_0007"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374541.1"
/db_xref="GI:218249346"
/db_xref="GeneID:7106330"
/translation="MNERENIIALIFDFDNTLIYGNMQQVLFDEYCVDSCSFWREVEG
LEYVYKQNGYNIISNEMIYLSHFLTYVREGFFESLDNRALFNLGAKLRFFEGVIGLFD
EISEINKKLENSKSQIKIYIVSSGFRQMILGSKIAPYVSKVWACEFIDSYLMPFYELR
DDKFSKNKILSSVCYFVDHTIKTRVIFEINKGSYEKINERVPKSKRQIPFKNIFYIAD
GFSDVPAFEILNNILKHCRNTLTVYHGNDKNAKKLFYENRVGDFAEANYTKGTKLYNW
IMEKICLSV"
misc_feature complement(7588..8241)
/locus_tag="BbuZS7_0007"
/note="haloacid dehalogenase-like hydrolase; Region: HAD;
pfam12710"
/db_xref="CDD:205034"
gene 8380..9150
/locus_tag="BbuZS7_0008"
/db_xref="GeneID:7106643"
CDS 8380..9150
/locus_tag="BbuZS7_0008"
/note="identified by match to protein family HMM PF02457;
match to protein family HMM TIGR00159"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374542.1"
/db_xref="GI:218249729"
/db_xref="GeneID:7106643"
/translation="MIDINDLNQIKDTFSRILDLSLISILVYYIYKNVINSYSTNLLK
GMLIIISVGIISYYLNLYTISWLLNYIANILPIAIVILFNQEIKKIIMQIGNFNLAFK
LSNKKEETLKVISEILKAVKHLSENKSGSLICIEKKIQLEQIINKGTKIDALISSELL
ISLFERETPLHDGAVIISKNKLKYAGSFLPLSNVDSISKAFGTRHRAGLGISENSDAI
TIITSEETGSISITINAKLEYNLSLSEIRNKLNLELIE"
misc_feature 8518..9147
/locus_tag="BbuZS7_0008"
/note="TIGR00159 family protein; Region: TIGR00159"
/db_xref="CDD:129263"
misc_feature 8728..9030
/locus_tag="BbuZS7_0008"
/note="DisA bacterial checkpoint controller
nucleotide-binding; Region: DisA_N; pfam02457"
/db_xref="CDD:190315"
gene 9155..10159
/locus_tag="BbuZS7_0009"
/db_xref="GeneID:7106902"
CDS 9155..10159
/locus_tag="BbuZS7_0009"
/note="identified by match to protein family HMM PF07949"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374543.1"
/db_xref="GI:218249645"
/db_xref="GeneID:7106902"
/translation="MEIGKKIINIIKLLFDDWQNKAISILIAILMFVAFNFNKIESIT
TEKEFKIILNDQIALGKIPDFSKIKITIKVNKDDLKYLDLNKIILFIEASNIKIPGSY
KLPIKIKNLNSIHIAEYKLSKTNVLLNLDNKVSKLVKIEPKFKLIEKDGKGEYFIAKY
NILPENLLVYGPEQELKKINTIQTNVKEFDTRTLFVSDYLEVVPPNPLVMFEKSHVVV
NIYLNKKYSNTTIKSPNLIFNNLKNGLEIKDKEKIINSENKMFVKIKTRLSEKQIKAH
INNQNISLAFDLADIKTPGIYNIAANIILKENINETEIYDYEPKKIKLEIIESSEIKP
"
misc_feature 9566..9814
/locus_tag="BbuZS7_0009"
/note="YbbR-like protein; Region: YbbR; pfam07949"
/db_xref="CDD:203816"
gene 10156..10530
/locus_tag="BbuZS7_0010"
/db_xref="GeneID:7106105"
CDS 10156..10530
/locus_tag="BbuZS7_0010"
/EC_number="2.7.8.7"
/note="identified by match to protein family HMM PF01648;
match to protein family HMM TIGR00556"
/codon_start=1
/transl_table=11
/product="holo-ACP synthase"
/protein_id="YP_002374544.1"
/db_xref="GI:218249713"
/db_xref="GeneID:7106105"
/translation="MKSIGCDIIKVERFKNFLENKKKMERFFTHKEIENFKLKGGSII
ESLAGKFAAKESLIKALSPLLQYKINYTLKDIEVIKSLKGNAEFCLHNEVEKFAIKMN
LKLYLTISHEKEYAIAFVIVEN"
misc_feature 10156..10527
/locus_tag="BbuZS7_0010"
/note="phosphopantetheine--protein transferase domain;
Region: pantethn_trn; TIGR00556"
/db_xref="CDD:188062"
gene 10534..11373
/locus_tag="BbuZS7_0011"
/db_xref="GeneID:7106886"
CDS 10534..11373
/locus_tag="BbuZS7_0011"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374545.1"
/db_xref="GI:218249596"
/db_xref="GeneID:7106886"
/translation="MKKISYFTKEKIECPVCSFKFQKEEFLTGSSRLIAGELKIDLKR
EYIKNDKYGNIYPRIYSITVCPKCYFAAFPSEFNSIPKNKKEILQNKKYERKKINTIF
DNMLNFSKPRTLKEGAASYILAMLSYEHLEKNYNPTLNQAKSAIRAAWTFEDLEKEEP
NKNYNYLQKIFYHKAAYLYKLVIEKDKDNSEPVSASTMFGPDTDKNYGYDSVLYLSGL
LEYFYGNKDNKEYRYKQLNDIKTTLSKIAGMGKFSKEKPSILLDKIKEVYFKISKEMK
NLK"
misc_feature 10543..11364
/locus_tag="BbuZS7_0011"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG1655"
/db_xref="CDD:31841"
misc_feature 10552..11346
/locus_tag="BbuZS7_0011"
/note="Uncharacterized protein conserved in bacteria
(DUF2225); Region: DUF2225; pfam09986"
/db_xref="CDD:150637"
gene 11374..12114
/gene="truA"
/locus_tag="BbuZS7_0012"
/db_xref="GeneID:7106847"
CDS 11374..12114
/gene="truA"
/locus_tag="BbuZS7_0012"
/EC_number="5.4.99.12"
/note="mediates pseudouridylation (positions 38, 39, 40)
at the tRNA anticodon region which contributes to the
structural stability"
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine synthase A"
/protein_id="YP_002374546.1"
/db_xref="GI:218249502"
/db_xref="GeneID:7106847"
/translation="MKKILAEIAYDGSIYHGFQIQPTKPTVQGEIEKALMKINKKKVK
IHSSGRTDKGVHAKRQIITFDIKINIQLNNLKKALNAILLKNSIKILKLRYVKNSFHP
RFSAQKRKYSYCILNSDNYYPWEGYQAHYVNKKLSISNLNQMAKTLIGKHDFTTFSCI
KDKSKSKFRHIYFAKFKKRGKYIIFEIIGSSFLWKMVRSIMGTMLDIEIKNESISTFE
TILKSKNRNLARTTAPANALFLERVYYE"
misc_feature 11374..12108
/gene="truA"
/locus_tag="BbuZS7_0012"
/note="tRNA pseudouridine synthase A; Validated; Region:
truA; PRK00021"
/db_xref="CDD:178798"
misc_feature 11395..12108
/gene="truA"
/locus_tag="BbuZS7_0012"
/note="Eukaryotic and bacterial pseudouridine synthases
similar to E. coli TruA; Region: PseudoU_synth_EcTruA;
cd02570"
/db_xref="CDD:211337"
misc_feature order(11398..11400,11611..11613,11620..11643)
/gene="truA"
/locus_tag="BbuZS7_0012"
/note="dimerization interface 3.5A [polypeptide binding];
other site"
/db_xref="CDD:211337"
misc_feature order(11518..11529,11965..11967)
/gene="truA"
/locus_tag="BbuZS7_0012"
/note="active site"
/db_xref="CDD:211337"
gene 12107..12706
/locus_tag="BbuZS7_0013"
/db_xref="GeneID:7106579"
CDS 12107..12706
/locus_tag="BbuZS7_0013"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374547.1"
/db_xref="GI:218249391"
/db_xref="GeneID:7106579"
/translation="MNNSVLTKKLFLLKILTNNIEGKITENFEEIDNEIKQKIEKAKN
TKIYQKNENSKEPAKLPLENQNSKNILLNNSLQEKGINDHIIIYVNKNYLNEPSRDII
TKWCKSINIYNYKIIDTIESLNLEISNKNPKAILSCEEIDFFLNQPLRIHIVRGIELR
FKGIPLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIKYG"
misc_feature <12533..12685
/locus_tag="BbuZS7_0013"
/note="Uracil-DNA glycosylases (UDG) and related enzymes;
Region: UDG_like; cl00483"
/db_xref="CDD:212225"
gene 12699..14681
/gene="priA"
/locus_tag="BbuZS7_0014"
/db_xref="GeneID:7106689"
CDS 12699..14681
/gene="priA"
/locus_tag="BbuZS7_0014"
/note="identified by match to protein family HMM PF00270;
match to protein family HMM PF00271; match to protein
family HMM PF04851; match to protein family HMM TIGR00595"
/codon_start=1
/transl_table=11
/product="primosomal protein N'"
/protein_id="YP_002374548.1"
/db_xref="GI:218249466"
/db_xref="GeneID:7106689"
/translation="MVEHYHSTYYYEIAINIPLNKLFFYKFNLNLEIGIRVMVNFNGS
NKIGIIIKKYFENEFKEKFEFKIKEIIKIIDTTKIITEHNIDLAHWISKKTFSGFGET
LFFGLPQNSKAKKNQTLPSINEHLDHKKCLELNNEQQNIYKEIIGSEKTNVFYLFGIP
GSGKTEIFIKLCEYYLALEQQVLFLIPEISLGYQIIKRIKYALNMHHKIYEYNSKVPN
SDKNLIWNKVKNGESLVVIGIKSVLMLPFTKLKLIIMDEEHETTYKSENIPRFHSRHI
SFFLQKKFNAKFVMGSATPSLEAYHAMKNNQIKKIIMQNKFSQSKIEDIKIINMKKEP
STISSELLYSIQKSLNEKRQSLIFINKRGYLKNLECNECGHIICCPNCSFGLIYHKKE
NKLLCHYCSYKTKTASHCPQCESKDIKYKTYGIQLVEKELKKFLPNAKIARIDSDITK
IENIDSINKFENKEIDILIGTQIIAKGFNFENIKTLGIINADIGMGLPDFRSGERIFT
TLSQIMGRAARFKDDNIIIIQTKNPNYYAIKYAYKNQYEQFYEEELDIRKKLNYPPFN
KIIRIIFRSKNEESAKQKCWEFFEKSKEFLQEEIEHLGPSEAIMKKISKNYRYNIIYL
SKSYSLLEKLVNKTKEKVKMTSTVYIEIDYYPISLI"
misc_feature 13161..14669
/gene="priA"
/locus_tag="BbuZS7_0014"
/note="primosomal protein N'; Region: priA; TIGR00595"
/db_xref="CDD:161946"
misc_feature 13164..13583
/gene="priA"
/locus_tag="BbuZS7_0014"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 13179..13193
/gene="priA"
/locus_tag="BbuZS7_0014"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 13464..13475
/gene="priA"
/locus_tag="BbuZS7_0014"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature <13971..14282
/gene="priA"
/locus_tag="BbuZS7_0014"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(14031..14036,14109..14117)
/gene="priA"
/locus_tag="BbuZS7_0014"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(14133..14135,14232..14234,14244..14246,14253..14255)
/gene="priA"
/locus_tag="BbuZS7_0014"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
gene complement(14678..15298)
/gene="udk"
/locus_tag="BbuZS7_0015"
/db_xref="GeneID:7106543"
CDS complement(14678..15298)
/gene="udk"
/locus_tag="BbuZS7_0015"
/EC_number="2.7.1.48"
/note="functions in pyrimidine salvage; pyrimidine
ribonucleoside kinase; phosphorylates nucleosides or
dinucleosides to make UMP or CMP using ATP or GTP as the
donor"
/codon_start=1
/transl_table=11
/product="uridine kinase"
/protein_id="YP_002374549.1"
/db_xref="GI:218249193"
/db_xref="GeneID:7106543"
/translation="MAKIIGISGGSGSGKTTVVSKISEFIPEFVLISQDNYYKSVGDY
EHEFSKVNFDHPDAFDNNLFYEHLKNLKKNSPIDMPLYDFINHKRQLKTVLVVPTPVV
IVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLRRDISKRGRTVESVIDQYLNTTR
WGYYRFIEPTKEYADLIIPEGGHNDKALYVLSTFLKSLSKEGLDFT"
misc_feature complement(14681..15256)
/gene="udk"
/locus_tag="BbuZS7_0015"
/note="Uridine kinase [Nucleotide transport and
metabolism]; Region: Udk; COG0572"
/db_xref="CDD:30917"
misc_feature complement(14705..15256)
/gene="udk"
/locus_tag="BbuZS7_0015"
/note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
also known as uridine kinase or uridine-cytidine kinase
(UCK), catalyzes the reversible phosphoryl transfer from
ATP to uridine or cytidine to yield UMP or CMP. In the
primidine nucleotide-salvage pathway; Region: UMPK;
cd02023"
/db_xref="CDD:30196"
misc_feature complement(order(14750..14752,14894..14896,15251..15253))
/gene="udk"
/locus_tag="BbuZS7_0015"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:30196"
misc_feature complement(order(14891..14893,15131..15133,15194..15196))
/gene="udk"
/locus_tag="BbuZS7_0015"
/note="Sugar specificity; other site"
/db_xref="CDD:30196"
misc_feature complement(order(14867..14869,15038..15040,15047..15049,
15053..15055,15140..15142,15185..15187))
/gene="udk"
/locus_tag="BbuZS7_0015"
/note="Pyrimidine base specificity; other site"
/db_xref="CDD:30196"
gene complement(15298..15576)
/locus_tag="BbuZS7_0016"
/db_xref="GeneID:7106732"
CDS complement(15298..15576)
/locus_tag="BbuZS7_0016"
/codon_start=1
/transl_table=11
/product="GlpE protein"
/protein_id="YP_002374550.1"
/db_xref="GI:218249846"
/db_xref="GeneID:7106732"
/translation="MLEKIQNGAKILDIRSPKEYSKSHYLKSINIPFNNLFAKKDKLG
DFESPIIVYGKSFNKSYEAKKVLKSMGFKNVFVAGTLKDMPQAKKEVG"
misc_feature complement(15346..15561)
/locus_tag="BbuZS7_0016"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cd00158"
/db_xref="CDD:29073"
misc_feature complement(15415..15417)
/locus_tag="BbuZS7_0016"
/note="active site residue [active]"
/db_xref="CDD:29073"
gene 15948..16757
/locus_tag="BbuZS7_0017"
/db_xref="GeneID:7106226"
CDS 15948..16757
/locus_tag="BbuZS7_0017"
/note="identified by match to protein family HMM PF02588"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374551.1"
/db_xref="GI:218249292"
/db_xref="GeneID:7106226"
/translation="MAISTNVLYIPHGLLSGGIGGISLMLHYLLSFNLGWTIFALNIP
LFLIGIKFLNLTFIIQSWISMGLYSIIINHSQFLQNKIHLNDMMLVSILAGLISGLGL
GLIFKGKGSSGGSDIIAMIIKEKYSISIGTTNFVVNLVVLILATFFFNIEIALYTLIA
SFVTSIMTDKTSTGFGNQKAILIISDKGKEIAYLLTNKLKLAATLIDGKGAWAGTEKT
IVFIVVPIMRLSRIKYISQKVDPNCFITVINTNEITGGKIITDPISLKQEI"
misc_feature 15948..16730
/locus_tag="BbuZS7_0017"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1284"
/db_xref="CDD:31475"
misc_feature <16302..16451
/locus_tag="BbuZS7_0017"
/note="Uncharacterized BCR, YitT family COG1284; Region:
DUF161; pfam02588"
/db_xref="CDD:202297"
misc_feature 16563..16712
/locus_tag="BbuZS7_0017"
/note="Uncharacterized protein conserved in bacteria
(DUF2179); Region: DUF2179; pfam10035"
/db_xref="CDD:204383"
gene complement(16760..17740)
/locus_tag="BbuZS7_0018"
/db_xref="GeneID:7106502"
CDS complement(16760..17740)
/locus_tag="BbuZS7_0018"
/EC_number="5.4.99.-"
/note="identified by match to protein family HMM PF00849;
match to protein family HMM TIGR00005"
/codon_start=1
/transl_table=11
/product="ribosomal large subunit pseudouridine synthase
D"
/protein_id="YP_002374552.1"
/db_xref="GI:218249610"
/db_xref="GeneID:7106502"
/translation="MIRVKREFTVKENALRLDLYLSGNFEVFTRSQIKRRNVEAFKKS
NGKFLKIKLSKPVFKDDEILIEFDEESSQIDCLRPSNIPIAIIYEDSNVIVLNKPQGI
LSHPGISHWDDTVVNFLLYHIKSLKINFNEEKIRPGIVHRLDKDTSGVLICAKNISTL
RFLAQQFKDKRINKVYIAIVKGNFNSFFGSIESFIDRDKHNRKKFSVSKDRGKKALTE
YRLLLNFGEYSLLALKPKTGRTHQLRVHMKYLNFPILGDEVYGRVDGSLKKITLMLHS
YKLEIDVGKNSFKKFISEFPKRFVIFLSNFYKSDELNLIIDNLVLFLRDF"
misc_feature complement(16898..17728)
/locus_tag="BbuZS7_0018"
/note="Pseudouridylate synthases, 23S RNA-specific
[Translation, ribosomal structure and biogenesis]; Region:
RluA; COG0564"
/db_xref="CDD:30910"
misc_feature complement(16898..17464)
/locus_tag="BbuZS7_0018"
/note="Pseudouridine synthase, RsuA/RluD family; Region:
PseudoU_synth_RluCD_like; cd02869"
/db_xref="CDD:211346"
misc_feature complement(order(17009..17011,17309..17320))
/locus_tag="BbuZS7_0018"
/note="active site"
/db_xref="CDD:211346"
gene complement(17745..18257)
/locus_tag="BbuZS7_0019"
/db_xref="GeneID:7106862"
CDS complement(17745..18257)
/locus_tag="BbuZS7_0019"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374553.1"
/db_xref="GI:218249716"
/db_xref="GeneID:7106862"
/translation="MFIVSLLLLFSVLNVYSNSLDYFKSNFNYLKLSDAKSLPLQDKS
TSNGNFVSHKKNNNMSVADNDDSFLYKNIQENKALNLENDLESKSAKDFFRFSAISIG
SFPIVLFLSLFFFDVSYYFYSGMNANYVPYPFSNGPSFSKDEIYKKFIVSASIGAIVA
LTIALLDYFL"
gene complement(18265..19932)
/locus_tag="BbuZS7_0020"
/db_xref="GeneID:7106889"
CDS complement(18265..19932)
/locus_tag="BbuZS7_0020"
/EC_number="2.7.1.90"
/note="catalyzes the formation of fructose
1,6-bisphosphate from fructose 6-phosphate and
diphosphate"
/codon_start=1
/transl_table=11
/product="diphosphate--fructose-6-phosphate
1-phosphotransferase"
/protein_id="YP_002374554.1"
/db_xref="GI:218249553"
/db_xref="GeneID:7106889"
/translation="MNTSLFKQERQKYIPKLPNILKKDFNNISLVYGENTEAIQDRQA
LKEFFKNTYGLPIISFTEGESSLSFSKALNIGIILSGGPAPGGHNVISGVFDAIKKFN
PNSKLFGFKGGPLGLLENDKIELTESLINSYRNTGGFDIVSSGRTKIETEEHYNKALF
VAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISF
GFDSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRSASHVALECALKTHPNICIVSEE
VLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGLIEFIPEVKSLMLELCDIFDK
NEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFELIKSILERDPHGNFNVSRV
PTEKLFIEMIQSRLNDMKKRGEYKGSFTPVDHFFGYEGRSAFPSNFDSDYCYSLGYNA
VVLILNGLTGYMSCIKNLNLKPTDWIAGGVPLTMLMNMEERYGEKKPVIKKALVDLEG
RPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEITETLKLELFK"
misc_feature complement(18277..19932)
/locus_tag="BbuZS7_0020"
/note="Phosphofructokinase, a key regulatory enzyme in
glycolysis, catalyzes the phosphorylation of
fructose-6-phosphate to fructose-1,6-biphosphate. The
members belong to a subfamily of the PFKA family (cd00363)
and include pyrophosphate-dependent...; Region:
Pyrophosphate_PFK; cd00765"
/db_xref="CDD:29440"
misc_feature complement(order(18640..18642,18649..18651,18997..18999,
19174..19182,19309..19311,19315..19317,19321..19323,
19390..19395,19399..19407,19495..19497,19591..19593,
19687..19689))
/locus_tag="BbuZS7_0020"
/note="active site"
/db_xref="CDD:29440"
misc_feature complement(order(18763..18795,19390..19395,19399..19407,
19495..19497,19591..19593,19687..19689))
/locus_tag="BbuZS7_0020"
/note="pyrophosphate binding site [ion binding]; other
site"
/db_xref="CDD:29440"
misc_feature complement(order(18379..18387,18532..18534,18577..18579,
18598..18600,18610..18615,19024..19026,19132..19134,
19138..19143,19228..19230,19237..19239,19249..19251,
19285..19287,19528..19530,19537..19539,19552..19554,
19645..19647,19657..19659))
/locus_tag="BbuZS7_0020"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29440"
misc_feature complement(order(18640..18642,18649..18651,18667..18669,
18997..18999,19174..19182,19201..19203,19309..19311,
19315..19317,19321..19323))
/locus_tag="BbuZS7_0020"
/note="fructose-6-phosphate binding site; other site"
/db_xref="CDD:29440"
gene complement(20004..21035)
/locus_tag="BbuZS7_0021"
/db_xref="GeneID:7106803"
CDS complement(20004..21035)
/locus_tag="BbuZS7_0021"
/EC_number="5.-.-.-"
/note="identified by match to protein family HMM PF02547;
match to protein family HMM TIGR00113"
/codon_start=1
/transl_table=11
/product="queuosine biosynthesis protein QueA"
/protein_id="YP_002374555.1"
/db_xref="GI:218249453"
/db_xref="GeneID:7106803"
/translation="MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQKIYHKNSV
NNILKYINSNIFNNSKARKSRIYAESEMSSNVEFLILDRIGTNLFTALVSKSKKQIIG
NFYKFPEGLMGEILSKNSSEVVLKFNNDVGEDYFEKHCFVPLPSYIKRDYDKIDEDRY
QTIYSKYVGSAASATAGLHFSIDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVEEH
NMHFETFLIKDFVAVRLQNAKLLGKKILSIVTTTLRALESSYDNNLKKFKTGQQSTNL
FIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYG
DAMLILNHI"
misc_feature complement(20016..21032)
/locus_tag="BbuZS7_0021"
/note="Queuosine biosynthesis protein; Region:
Queuosine_synth; pfam02547"
/db_xref="CDD:202279"
misc_feature complement(20016..21032)
/locus_tag="BbuZS7_0021"
/note="S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; Region: queA; TIGR00113"
/db_xref="CDD:211549"
gene complement(21010..22053)
/gene="ruvB"
/locus_tag="BbuZS7_0022"
/db_xref="GeneID:7106447"
CDS complement(21010..22053)
/gene="ruvB"
/locus_tag="BbuZS7_0022"
/EC_number="3.6.1.-"
/note="promotes strand exchange during homologous
recombination; RuvAB complex promotes branch migration;
RuvABC complex scans the DNA during branch migration and
resolves Holliday junctions at consensus sequences; forms
hexameric rings around opposite DNA arms; requires ATP for
branch migration and orientation of RuvAB complex
determines direction of migration"
/codon_start=1
/transl_table=11
/product="Holliday junction DNA helicase RuvB"
/protein_id="YP_002374556.1"
/db_xref="GI:218249701"
/db_xref="GeneID:7106447"
/translation="MKDENSISFLSSNENYLYDKSENELRPKVFEDFKGQVNVKETLS
IFIRASKERDEALDHVFLSGPPGLGKTTLASIIAFEMNASIKITSAPAFDKPKDIIGI
LTGLDEKSVLFIDEIHRLRPIIEEMLCIAMEDYELDWVIGQGANARTVRMPLPKFTLI
GATTKPGKVTSPLYARFGITARFELYSEIELVEIIKRNSLILNIEIEEDAAFLLARSS
RGTPRIANRLLRRIRDIAQVTGSLVITSDIVSIGLEMLRIDGEGLDEQDRNILRSLIL
KFNGGPVGVDTLAISVGETADSLEDFYEPYLIMKGFISRTHRGRKATEFAYLHLNLEM
KEDGLNENQRVSF"
misc_feature complement(21052..21990)
/gene="ruvB"
/locus_tag="BbuZS7_0022"
/note="Holliday junction DNA helicase RuvB; Reviewed;
Region: ruvB; PRK00080"
/db_xref="CDD:178847"
misc_feature complement(21499..21954)
/gene="ruvB"
/locus_tag="BbuZS7_0022"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(21841..21864)
/gene="ruvB"
/locus_tag="BbuZS7_0022"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(21562..21564,21709..21711,21838..21861))
/gene="ruvB"
/locus_tag="BbuZS7_0022"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(21706..21723)
/gene="ruvB"
/locus_tag="BbuZS7_0022"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(21526..21528)
/gene="ruvB"
/locus_tag="BbuZS7_0022"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature complement(21055..21279)
/gene="ruvB"
/locus_tag="BbuZS7_0022"
/note="Holliday junction DNA helicase ruvB C-terminus;
Region: RuvB_C; pfam05491"
/db_xref="CDD:203257"
gene complement(22098..22691)
/gene="ruvA"
/locus_tag="BbuZS7_0023"
/db_xref="GeneID:7106874"
CDS complement(22098..22691)
/gene="ruvA"
/locus_tag="BbuZS7_0023"
/EC_number="3.6.1.-"
/note="plays an essential role in ATP-dependent branch
migration of the Holliday junction"
/codon_start=1
/transl_table=11
/product="Holliday junction DNA helicase RuvA"
/protein_id="YP_002374557.1"
/db_xref="GI:218249661"
/db_xref="GeneID:7106874"
/translation="MINKIHGKVIEKKESSLVLMTTVFEFELLVSAFCLANFNLSDKV
ELFTYLYTRENELKLFGFLNSDEREIFKELIGVSGVGPRAALRVLSNIRYNEFKEAID
KEDIELVSKIKGIGKKMAGKMFLHLQGKLLINSELESTGLFRFKELEESIVSMGFDRK
IVNSKIREAFNLAEFANLKDSEKEQFLFKEVLKRISN"
misc_feature complement(22101..22691)
/gene="ruvA"
/locus_tag="BbuZS7_0023"
/note="Holliday junction DNA helicase RuvA; Provisional;
Region: ruvA; PRK13901"
/db_xref="CDD:139961"
misc_feature complement(22509..22691)
/gene="ruvA"
/locus_tag="BbuZS7_0023"
/note="RuvA N terminal domain; Region: RuvA_N; pfam01330"
/db_xref="CDD:201732"
gene 22771..23910
/locus_tag="BbuZS7_0024"
/db_xref="GeneID:7106121"
CDS 22771..23910
/locus_tag="BbuZS7_0024"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374558.1"
/db_xref="GI:218249947"
/db_xref="GeneID:7106121"
/translation="MKNQFLNSYFQLITTIFLISSITIAAEEITSTLKVPNGFKVEIF
LNNTIEKPRGITNDQDGNIFIGSGSTFAYFVTKNRKIYTIAKTLQKPIGIDYWDNKLY
ISSVDKIYVVKNVKEEINKSIKSHKDYTWKMQIFALLPKNNSQMHSGRYIKVDSKNNK
LIVNIGSQHNVKIPPKKEAVILSINLKTKKEEIVAFGVRNSVGFDFHPISNEIYFSDN
GQDGLGDNIPPDEINVITEYKEHFGFPYVFGKNQKNYGFYNKAPKNTKFIPSIYELPA
HVAPLGIHFYRGNNFPKEYINKLFIAEHGSWNRSSPVGYKITTLDIDSKTRTARNYKT
FLYGFLKHDKSKFGRPVDIITYYDGSILFTDDFGNKIYRVYYEKI"
misc_feature 22846..23904
/locus_tag="BbuZS7_0024"
/note="Glucose/sorbosone dehydrogenases [Carbohydrate
transport and metabolism]; Region: COG2133"
/db_xref="CDD:32316"
misc_feature 23131..23346
/locus_tag="BbuZS7_0024"
/note="KIAA1430 homologue; Region: KIAA1430; pfam13879"
/db_xref="CDD:206050"
gene complement(23917..24648)
/locus_tag="BbuZS7_0025"
/db_xref="GeneID:7106253"
CDS complement(23917..24648)
/locus_tag="BbuZS7_0025"
/note="identified by match to protein family HMM PF01709;
match to protein family HMM TIGR01033"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374559.1"
/db_xref="GI:218249293"
/db_xref="GeneID:7106253"
/translation="MSGHSKWSTIKRKKGALDAKRNKIFTKLIREITIAAKIGGGDIE
SNPRLRVAVNKAKVANMPKDNIEKAIKKGIGGNEGVEYFEITYEAYAPYGVALMIKCL
TDNKNRTSSDVKSVLAKGGGSLGTPGSVSYMFYRKGLIVYNLEKYLEDEIMEFALEVG
AEDILVSNNEAEVITSPDDFDKVLSFLKTKFKEEVAEIALIPENKISLNKDQAEKIIL
LVEKLEDFDDVQEVIHNLEIPEELS"
misc_feature complement(23923..24648)
/locus_tag="BbuZS7_0025"
/note="hypothetical protein; Validated; Region: PRK00110"
/db_xref="CDD:178871"
gene complement(24649..25575)
/locus_tag="BbuZS7_0026"
/db_xref="GeneID:7106503"
CDS complement(24649..25575)
/locus_tag="BbuZS7_0026"
/note="identified by match to protein family HMM PF00763;
match to protein family HMM PF02882"
/codon_start=1
/transl_table=11
/product="methylenetetrahydrofolate dehydrogenase"
/protein_id="YP_002374560.1"
/db_xref="GI:218249171"
/db_xref="GeneID:7106503"
/translation="MGFKGYILSIVFNGKDFANKYYLMLKEFLKQHNLRDKIALKVVL
ANDEPASNLYVSIKSRVAKEIGLNVEVIKFSANSVQSDILEVIDRENKNLSTDGIIVQ
LPLLKGMDLNSILNSIVYSKDVDGLSFVNLGKMILGDKKGFIPCTALAVLKILRDEGI
KTLGKTVVVVGRSPLVGRPISILLSSKPYDATVIACHSKSIYLDVYLRQADIVISAVG
KPRLIDKSMLCGKPYVIDIGISEIETDNGKILSGDTDFDNIKECVKFITPVKGGIGPV
TVLMLMFNTIKAHLINNRMFDVLNRLEKLLEV"
misc_feature complement(24691..25548)
/locus_tag="BbuZS7_0026"
/note="5,10-methylene-tetrahydrofolate
dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
[Coenzyme metabolism]; Region: FolD; COG0190"
/db_xref="CDD:30539"
misc_feature complement(25201..25548)
/locus_tag="BbuZS7_0026"
/note="Tetrahydrofolate dehydrogenase/cyclohydrolase,
catalytic domain; Region: THF_DHG_CYH; pfam00763"
/db_xref="CDD:201431"
misc_feature complement(24709..25218)
/locus_tag="BbuZS7_0026"
/note="NADP binding domain of methylene-tetrahydrofolate
dehydrogenase/cyclohydrolase; Region:
NAD_bind_m-THF_DH_Cyclohyd; cd01080"
/db_xref="CDD:133448"
misc_feature complement(order(24949..24951,24976..24981,24985..24987,
24991..25008,25021..25023,25030..25035,25060..25062,
25078..25080,25084..25086,25177..25179,25186..25191))
/locus_tag="BbuZS7_0026"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:133448"
misc_feature complement(order(24745..24747,24754..24756,24859..24861,
24865..24867,24910..24912,24919..24921,24925..24927,
24982..24987,25057..25062,25135..25137))
/locus_tag="BbuZS7_0026"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:133448"
misc_feature complement(order(24742..24744,24763..24768))
/locus_tag="BbuZS7_0026"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133448"
gene 25705..26343
/locus_tag="BbuZS7_0027"
/db_xref="GeneID:7106708"
CDS 25705..26343
/locus_tag="BbuZS7_0027"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374561.1"
/db_xref="GI:218249570"
/db_xref="GeneID:7106708"
/translation="MRKYIFIILIAVLLIGVNIKKIAAAANIDRHTNSTLGIDLSVGI
PIFYNDLSKAYPTNLYPGGIGAIKYQYHILNNLAIGLELRYMFNFDINHSFNILNPDS
SVGKIFYSVPITFSINYIFDIGELFQIPVFTNIGFSLNTYGDRNNNITNLRTFDALPT
ISFGSGILWNFNYKWAFGATASWWMMFEFGNSAKMAHFALVSLSVTVNVNKL"
gene 26351..27400
/locus_tag="BbuZS7_0028"
/db_xref="GeneID:7106820"
CDS 26351..27400
/locus_tag="BbuZS7_0028"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_002374562.1"
/db_xref="GI:218249736"
/db_xref="GeneID:7106820"
/translation="MKQKYENYFKKRLILNLLIFLLLACSSESIFSQLGNLQKIKHEY
NILGSSSPRGISLVGETLYIAAMHLFKKENGKIEKIDLSNSYEFINDIVNISGKTYLL
AQNKEEELEVCELNGKDWTLKFKKPLKAYKFLKSVGRDGVKEAYILAIDKNNREKIFD
LQGSDKTPPQATENDKFYQISNEENLITGNSLKIWQMNNNTYTNIDYQQAKEIMPIIK
TSIRGSSEVLVMTGGYNNLDTKFKVYSNTNNYTTPIFIQDEVGEFSSYFAREFNDAIL
IGSNNGFAEFTKNKEGIFALRAPSKSVEPGAYNGSQLSKTGLNDIIPVSNNTIYILTQ
GKGLWKLENRKLTKE"
gene complement(27386..27817)
/locus_tag="BbuZS7_0029"
/db_xref="GeneID:7106909"
CDS complement(27386..27817)
/locus_tag="BbuZS7_0029"
/note="identified by match to protein family HMM PF02639"
/codon_start=1
/transl_table=11
/product="YaiI/YqxD family protein"
/protein_id="YP_002374563.1"
/db_xref="GI:218249443"
/db_xref="GeneID:7106909"
/translation="MLSKIFVDADSCNFKIIKFLQKFILHNKSKLIVVSNKFFSLEIT
ENVALEVVDNVDSFILNLADRYSLVITRDIFFAKLLLDLGVKVMNDEGRIFDINNINY
LYFRSKINFNLKIKIKKYYDEDFNKSRYEKFITNFYSLFFS"
misc_feature complement(27389..27814)
/locus_tag="BbuZS7_0029"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG1671"
/db_xref="CDD:31857"
gene complement(27807..28442)
/gene="lepB"
/locus_tag="BbuZS7_0030"
/db_xref="GeneID:7106437"
CDS complement(27807..28442)
/gene="lepB"
/locus_tag="BbuZS7_0030"
/EC_number="3.4.21.89"
/note="identified by match to protein family HMM
TIGR02227"
/codon_start=1
/transl_table=11
/product="signal peptidase I"
/protein_id="YP_002374564.1"
/db_xref="GI:218249619"
/db_xref="GeneID:7106437"
/translation="MAPYLTFEQRLLRKRQRKVFFKYFLTFLILNFFFTKFVLQIFMI
KSNEMLPTITKNASLFFVATHITSFFIPLKMNDIVLYEDFRLSNNFLLTLIKDFFFLN
KIFKRASYKVSRIAAVQGDSVYVRGLNVLVNKKDTNFFYLNGNLVSYYKLNDFFNTDE
VIKCFTLKKNEFFLLNDNLSVLNDSRIFGPINKNAIVSFLVLKVVDYKIVK"
misc_feature complement(27852..28331)
/gene="lepB"
/locus_tag="BbuZS7_0030"
/note="signal peptidase I, bacterial type; Region:
sigpep_I_bact; TIGR02227"
/db_xref="CDD:211726"
gene complement(28444..29424)
/gene="lepB"
/locus_tag="BbuZS7_0031"
/db_xref="GeneID:7106078"
CDS complement(28444..29424)
/gene="lepB"
/locus_tag="BbuZS7_0031"
/EC_number="3.4.21.89"
/note="identified by match to protein family HMM PF00717;
match to protein family HMM TIGR02227"
/codon_start=1
/transl_table=11
/product="signal peptidase I"
/protein_id="YP_002374565.1"
/db_xref="GI:218249899"
/db_xref="GeneID:7106078"
/translation="MYLRRLDKFASFLVHIVEKYLTYRKRKKYFCKLRAKKRGFLLNF
LFDFVAAAIFVLVINQYFVQAYKIPSGSMENTLQIGDFLFVDKFSYGPELLPGLFKIN
GFKAPEESDIIIFENPEYKSKGVFFDIFQRILYMLTLSFIDLDRDEYGNPNVRFLVKR
GAFADGKIVRFNNGKAYIKREGEENFILEDSYWDLVDKNFKIKKIVANEDYGIYGDFA
MFVALSQLNINLSSTPDFSFFDVRMIDRFEFERLEYKYLSAFMPYVDYYMEKAIMRDY
GIYVPDGYILPIGDNRDNSHDGRFFGVINKNKVLGRTLIIYLPFSRVGFI"
misc_feature complement(<29056..29235)
/gene="lepB"
/locus_tag="BbuZS7_0031"
/note="The S26 Type I signal peptidase (SPase; LepB;
leader peptidase B; leader peptidase I; EC 3.4.21.89)
family members are essential membrane-bound serine
proteases that function to cleave the amino-terminal
signal peptide extension from proteins that are...;
Region: S26_SPase_I; cd06530"
/db_xref="CDD:119398"
misc_feature complement(29209..29211)
/gene="lepB"
/locus_tag="BbuZS7_0031"
/note="Catalytic site [active]"
/db_xref="CDD:119398"
misc_feature complement(28489..>28578)
/gene="lepB"
/locus_tag="BbuZS7_0031"
/note="The S26 Type I signal peptidase (SPase; LepB;
leader peptidase B; leader peptidase I; EC 3.4.21.89)
family members are essential membrane-bound serine
proteases that function to cleave the amino-terminal
signal peptide extension from proteins that are...;
Region: S26_SPase_I; cd06530"
/db_xref="CDD:119398"
gene 29495..30967
/locus_tag="BbuZS7_0032"
/db_xref="GeneID:7106359"
CDS 29495..30967
/locus_tag="BbuZS7_0032"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374566.1"
/db_xref="GI:218249775"
/db_xref="GeneID:7106359"
/translation="MKEVDENSNVELFEVKLKPILGIEPKVYVFLTTRILLLSLISTL
IIIPKFKNPGAYLKINSNIENTYIYLNEKYIGRTPLNKYINATEGVLRAKRMGFKTYE
QRIKIHNKFFGNYSLQINLELVDPEKIIKQRQKELSIMVKIKNINENTKLIPVFSLIS
SELKEHPKYIKKFLKDSIPYLNSTEMFKDFLNSYKAIYSIDQDNSNQEEIWNSLKTNF
DLENRAIFWFLENLDKDLKILTKNAPWVKTLAKTLDNENIQLISKNEKINIKLPGFKK
INSNKIEKIQNYELNSLDSKNISLKSTYNVKEFLIQEQNVTKYEYQDFLKENPKWALN
NKENLIKEQLVDENYLKNFNQIGLNEAITGISYFSAIEYANWYSKKLPTGFKARLPIS
QEWELYQKEPNKNPLNINEISKKVGFWNLMQNSSFNEIAIFKNEKNFYSENSNFYSLI
TEIRTYSQQNNNLLNASTKASFLKNWSSPNIGFRLIVSKE"
misc_feature 29657..>29815
/locus_tag="BbuZS7_0032"
/note="Peptidase associated domain: C-terminal domain of
M14 N/E carboxypeptidase; putative folding, regulation, or
interaction domain; Region: Peptidase_M14NE-CP-C_like;
cl01383"
/db_xref="CDD:211449"
misc_feature 30401..>30682
/locus_tag="BbuZS7_0032"
/note="Formylglycine-generating sulfatase enzyme; Region:
FGE-sulfatase; cl15394"
/db_xref="CDD:199530"
gene 30979..31431
/gene="smpB"
/locus_tag="BbuZS7_0033"
/db_xref="GeneID:7106152"
CDS 30979..31431
/gene="smpB"
/locus_tag="BbuZS7_0033"
/note="binds to ssrA RNA (tmRNA) and is required for its
successful binding to ribosomes; also appears to function
in the trans-translation step by promoting accommodation
of tmRNA into the ribosomal A site; SmpB protects the
tmRNA from RNase R degradation in Caulobacter crescentus;
both the tmRNA and SmpB are regulated in cell
cycle-dependent manner; functions in release of stalled
ribosomes from damaged mRNAs and targeting proteins for
degradation"
/codon_start=1
/transl_table=11
/product="SsrA-binding protein"
/protein_id="YP_002374567.1"
/db_xref="GI:218249481"
/db_xref="GeneID:7106152"
/translation="MNTNNLLLENKKAKFNYFIEEKISCGIVLKGTEVKSIKAKKLSF
NNSFASIKKEELWLENLHVSKYKEGNIFNHDELRPRKLLIKKRELQRLKKFKEKEGYT
LIPISFYLKKSIIKVEVGICKGKKLYDKREILKQKSIKKDLSREIKYK"
misc_feature 31006..31353
/gene="smpB"
/locus_tag="BbuZS7_0033"
/note="Small protein B (SmpB) is a component of the
trans-translation system in prokaryotes for releasing
stalled ribosome from damaged messenger RNAs; Region:
SmpB; cd09294"
/db_xref="CDD:187755"
misc_feature order(31048..31065,31069..31074,31078..31083,31090..31092,
31141..31143,31225..31242,31324..31326)
/gene="smpB"
/locus_tag="BbuZS7_0033"
/note="SmpB-tmRNA interface; other site"
/db_xref="CDD:187755"
gene complement(31502..32041)
/locus_tag="BbuZS7_0034"
/db_xref="GeneID:7106558"
CDS complement(31502..32041)
/locus_tag="BbuZS7_0034"
/note="identified by match to protein family HMM PF05628"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374568.1"
/db_xref="GI:218249174"
/db_xref="GeneID:7106558"
/translation="MNKLLIFVLATFCVFSSFAQANDSKNGAFGMSAGEKLLVYETSK
QDPIVPFLLNLFLGFGIGSFAQGDILGGSLILGFDAVGIGLILAGAYLDIKALDGITK
KAAFQWTWGKGVMLAGVVTMAVTRLTEIILPFTFANSYNRKLKNSLNVALGGFEPSFD
VAMGQSSALGFELSFKKSY"
misc_feature complement(31505..31936)
/locus_tag="BbuZS7_0034"
/note="Borrelia membrane protein P13; Region:
Borrelia_P13; pfam05628"
/db_xref="CDD:191324"
gene complement(32109..33989)
/locus_tag="BbuZS7_0035"
/db_xref="GeneID:7106711"
CDS complement(32109..33989)
/locus_tag="BbuZS7_0035"
/note="decatenates newly replicated chromosomal DNA and
relaxes positive and negative DNA supercoiling"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase IV subunit A"
/protein_id="YP_002374569.1"
/db_xref="GI:218249341"
/db_xref="GeneID:7106711"
/translation="MDIRTVLKDNFLQYSSYVIKDRAIASVVDGFKPVQRRIIHSLFE
MHDGNFHKVANVVGNTMKYHPHGDTSIYEALVNIANKDLFIEKQGNFGNLFTGDPASA
SRYIECRLTPLAFDVLYSKEITIYESSYDGRNNEPLLYPAKIPVILIQGSEGIAVGMA
AKILPHNFNEILNAVKSELLGESYDIYPDFPTGGIVDVNEYADGNGKVLVRAKIETID
EKTIVIRELPFGETTESLISSIEKAIRKNYIKVSSINDFTAENVAIELSLPRGVYASE
VIEKLYHYTNCQISISVNLLLLSERYPVVYTIKDLIKFHAAHLQKILKMELELQKSKI
LEKIFYKTLEQIFIEKKIYKLLETISKEENILSIILSEVLRHKESFSREVLKEDVENL
LKIPIRKISLFDIDKNSKDIKILNKELKSINSNISSIRGYSINFIDLLLAKYSKEHQR
KTKISLIKSKNVKEIATKNMKVYLNLAEGFAGTSLFDGEFIGNASYYDKILVFRENSY
VLKNIEDKTFIDKKNVCALVYDINNSKEQIFSIIYFNRLDNFYYVKRFKIDKFITDKV
YEFLGENDEFVDFSLNPEFVEFSTNKDIVKRIEIDNFMVKSRSSIGKRISSNNLKKVK
FK"
misc_feature complement(32112..33989)
/locus_tag="BbuZS7_0035"
/note="DNA topoisomerase IV subunit A; Provisional;
Region: PRK09631"
/db_xref="CDD:182004"
misc_feature complement(order(33570..33572,33579..33635,33636..33644,
33648..33704,33711..33752,33753..33806,33807..33845,
33855..33929))
/locus_tag="BbuZS7_0035"
/note="CAP-like domain; other site"
/db_xref="CDD:29149"
misc_feature complement(32676..33926)
/locus_tag="BbuZS7_0035"
/note="DNA gyrase/topoisomerase IV, subunit A; Region:
DNA_topoisoIV; pfam00521"
/db_xref="CDD:201280"
misc_feature complement(33675..33677)
/locus_tag="BbuZS7_0035"
/note="active site"
/db_xref="CDD:29149"
misc_feature complement(order(32772..32822,32886..32891,32913..32924,
32937..32945))
/locus_tag="BbuZS7_0035"
/note="primary dimer interface [polypeptide binding];
other site"
/db_xref="CDD:29149"
gene complement(33989..35788)
/locus_tag="BbuZS7_0036"
/db_xref="GeneID:7106637"
CDS complement(33989..35788)
/locus_tag="BbuZS7_0036"
/note="decatenates newly replicated chromosomal DNA and
relaxes positive and negative DNA supercoiling"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase IV subunit B"
/protein_id="YP_002374570.1"
/db_xref="GI:218249859"
/db_xref="GeneID:7106637"
/translation="MKTQNYDESKIITLSSLEHIRLRSGMYIGRLGDGSNIDDGIYVL
IKEIIDNSIDEFIMGYGNEIFIKKENNLISIRDYGRGIPLGKVIESVSVINTGAKYND
DVFQFSVGLNGVGTKAVNALSSKFLVRSTRNGKSFEALFSKGKLLESREIKSSDKDGT
YVEFLADSEIFGKYSYSEDFLKRRFFHYACLNKGLIINYNDQIFESKNGLLDFLNSEI
KSDDLLYDIVYYSSKTLEFAFSHTNNYGETYFSFVNGQYTNDGGTHQTGFREGFVRAI
NDFLKKTYSSTDIREGLVATLSVKIKDPIFESQTKNKLGNIETRGNVAKEVQKIISEI
LYKDKILAKLIEKKVVDNERLRKELSSVRKEARERAKKISFKIPKLKDCKFHFNDSSK
QSEQTMIFLTEGDSATGSMVSCRDVYTQAIFSLRGKPQNMFEKNKSEIYKNEELYNMM
VALGIEESIENLRYNKVVIATDADFDGFHIRNLLLTFFLTFFEDLILNGHMYILETPL
FRVRNKKITTYCYSEEEKQKAILELKGGCEVTRFKGLGEISPNEFKGFIDINSIKLTK
VDLFNIKEIKEKLGFYMGQNTPERRNFIMENLI"
misc_feature complement(33995..35788)
/locus_tag="BbuZS7_0036"
/note="DNA topoisomerase IV subunit B; Reviewed; Region:
PRK05559"
/db_xref="CDD:180127"
misc_feature complement(35282..35656)
/locus_tag="BbuZS7_0036"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cl00075"
/db_xref="CDD:206820"
misc_feature complement(34694..35167)
/locus_tag="BbuZS7_0036"
/note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
a ribosomal S5 domain 2-like fold, of the type found in
proteins of the type IIA family of DNA topoisomerases
similar to the B subunits of E. coli DNA gyrase and E.
coli Topoisomerase IV which are; Region:
TopoII_Trans_DNA_gyrase; cd00822"
/db_xref="CDD:48467"
misc_feature complement(35027..35029)
/locus_tag="BbuZS7_0036"
/note="anchoring element; other site"
/db_xref="CDD:48467"
misc_feature complement(order(34700..34702,34712..34714,34724..34729,
34862..34864,34868..34873,34880..34882))
/locus_tag="BbuZS7_0036"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48467"
misc_feature complement(order(34856..34858,34862..34864))
/locus_tag="BbuZS7_0036"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:48467"
misc_feature complement(34271..34600)
/locus_tag="BbuZS7_0036"
/note="TOPRIM_TopoIIA_like: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in proteins of the type IIA family of DNA topoisomerases
similar to Saccharomyces cerevisiae Topoisomerase II.
TopoIIA enzymes cut both strands...; Region:
TOPRIM_TopoIIA_like; cd01030"
/db_xref="CDD:173780"
misc_feature complement(order(34361..34363,34367..34369,34373..34375,
34568..34570,34577..34582))
/locus_tag="BbuZS7_0036"
/note="active site"
/db_xref="CDD:173780"
misc_feature complement(order(34373..34375,34580..34582))
/locus_tag="BbuZS7_0036"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173780"
misc_feature complement(34004..34189)
/locus_tag="BbuZS7_0036"
/note="DNA gyrase B subunit, carboxyl terminus; Region:
DNA_gyraseB_C; pfam00986"
/db_xref="CDD:201537"
gene complement(35809..36561)
/locus_tag="BbuZS7_0037"
/db_xref="GeneID:7106319"
CDS complement(35809..36561)
/locus_tag="BbuZS7_0037"
/EC_number="2.3.1.51"
/note="identified by match to protein family HMM PF01553;
match to protein family HMM TIGR00530"
/codon_start=1
/transl_table=11
/product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
/protein_id="YP_002374571.1"
/db_xref="GI:218249940"
/db_xref="GeneID:7106319"
/translation="MIIVFMKILRSIITYFNVLLFFLILIFFLFPFYLVCKIFLIERY
VVRLSFIMMRACIKISLWLAGIKIIVTGSENIPKKSNVIIMGNHIAAMDPLIFIYTFA
CPFVILAKHSLLRIPFVNIVLIVMGVIFVNRRSIRSAAAAEVKAIKVMREGRSIGIFP
EGTRNRGGDTRVFKKGSIKMALKTGTSILPVTLYNTNNFFIKNIIFNSGLSVYIHVHP
LIDVLKLSEYEKENLTSIIRDQIVKKLETIKI"
misc_feature complement(<35983..36471)
/locus_tag="BbuZS7_0037"
/note="1-acyl-sn-glycerol-3-phosphate acyltransferase
[Lipid metabolism]; Region: PlsC; COG0204"
/db_xref="CDD:30553"
misc_feature complement(35824..36393)
/locus_tag="BbuZS7_0037"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: AGPAT-like; Region:
LPLAT_AGPAT-like; cd07989"
/db_xref="CDD:153251"
misc_feature complement(order(36070..36078,36226..36237,36283..36285,
36289..36291,36298..36300))
/locus_tag="BbuZS7_0037"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153251"
gene complement(36558..38075)
/locus_tag="BbuZS7_0038"
/db_xref="GeneID:7106246"
CDS complement(36558..38075)
/locus_tag="BbuZS7_0038"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374572.1"
/db_xref="GI:218249684"
/db_xref="GeneID:7106246"
/translation="MTKVLVVSAIALLNKDKELIPFYKFLFLFFFFTLLACSKVSKDF
IVFNKDVKTSSRIDNPNSNVLEVNKMEDFFGDIIDLKGYKILSVQQENLNLDVYFEQV
VLAQNFSNLNAYLFIIGFDPKIKAGTILFKTQIDIDPKNSYNMYLEDITGDYDFNIVI
QGFLKDKSVLYVFQKSVLNDVSSYRPIFFDKVNGTVLINKYARSSAYEENRSRESYPI
SLEKYEKVGEDLIISKIEKYEYSNVQGRYCLSSVSEKVGKIDNNIYKTLKNLSKDEVY
KFLHGVWYDVHDYNKMHVKDIDEVLFLSFERQSSEINLFRKNSQEVAKIEYISKPAYN
TLNVSAKSLFSDLIVYNFWIKIVDKENIEIKIDTSTNSYDNSGFSGTFKRFDENVLNV
KKGSSDIYFIPSGNYVYKDKIYDFSYPHLTYIDENKIYYGIFNIFPLKNNFVLEYEID
MGSYKLVESFFLEHSERIVQKQKFSTIILNPIKILKDDVSLVKGQKLKLERIEKI"
gene complement(38088..39590)
/locus_tag="BbuZS7_0039"
/db_xref="GeneID:7106144"
CDS complement(38088..39590)
/locus_tag="BbuZS7_0039"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374573.1"
/db_xref="GI:218249405"
/db_xref="GeneID:7106144"
/translation="MRKRSRKVKNDLVVLESKEKKVGMWGIFALILIVFGFIIAPLLP
GIFDNAHSSGLKFGSYKGQPIYYKKDSKFAKYVNYYSNLYSRLQGNAKNINTDYNAWY
LAFMKYVEDVAFLDLVKKYNFYISKEMLNKNLLKSPEYLDSSGNFSSKRYNKASDYQK
VKIYDDMVENILFSNVKIFLNSNLIFPDSLFDMIKNMSTVERHISYLSLSYQDFSNKE
VISYAEKNLNLFKRLSLASIRFKNMNDARTAHDKLLNKTPFEELAKLYSDDIANFKGV
VSLDKYYFDLDLNVEKKEDLNSIFSLREGEFSKPIKIKNKNEYQIYKAFSNVHDFDKN
SDRDISSVKNYIETYEPSVIEGYLENKLSDFLGDVKFSSLSQVLEKYQLSLKEEIVNL
SYNINVYPNTLKELVEFNNSKSFYDIIFGLKENSWSKPFVANKKVYLFFLNSVKKRSN
QLKDEIKNEKILDNFNIANSGLITDFLLNKKDFVNNFNESFFALQNFSQN"
misc_feature complement(38646..38948)
/locus_tag="BbuZS7_0039"
/note="PPIC-type PPIASE domain; Region: Rotamase_2;
cl08278"
/db_xref="CDD:208845"
gene 39778..40629
/gene="cheR"
/locus_tag="BbuZS7_0040"
/db_xref="GeneID:7106398"
CDS 39778..40629
/gene="cheR"
/locus_tag="BbuZS7_0040"
/EC_number="2.1.1.80"
/note="identified by match to protein family HMM PF01739;
match to protein family HMM PF03705"
/codon_start=1
/transl_table=11
/product="chemotaxis protein CheR"
/protein_id="YP_002374574.1"
/db_xref="GI:218249793"
/db_xref="GeneID:7106398"
/translation="MNTNQNKFNLNINITKDELSRLIKIVYNNFGINLSEKKKLLIES
RLSSLLKVKGFKNFTEYINFLEKSTGNIQLIELIDKISTNHTYFFRESKHFDFLNNKI
LPKLTEKILNSENSEIRIWSAGCSSGEEPYTIAMILKEYMEHNRVNFKVKILATDISI
SVLNEAREGIYPEDRIINLPKYLKIKYLNQLQDDKFQVKEILKKMVYFKKLNLMDEKF
PFSKKFDLIFCRNVMIYFDEKTRNNLANKFNSYLKKDSYLLIGHSETIRGNKNLEYIM
PATYKKN"
misc_feature 39820..39981
/gene="cheR"
/locus_tag="BbuZS7_0040"
/note="CheR methyltransferase, all-alpha domain; Region:
CheR_N; pfam03705"
/db_xref="CDD:202731"
misc_feature 39823..40626
/gene="cheR"
/locus_tag="BbuZS7_0040"
/note="Methyltransferase, chemotaxis proteins; Region:
MeTrc; smart00138"
/db_xref="CDD:197535"
misc_feature 40027..40626
/gene="cheR"
/locus_tag="BbuZS7_0040"
/note="CheR methyltransferase, SAM binding domain; Region:
CheR; pfam01739"
/db_xref="CDD:201947"
gene complement(40713..41384)
/gene="phoU"
/locus_tag="BbuZS7_0041"
/db_xref="GeneID:7106170"
CDS complement(40713..41384)
/gene="phoU"
/locus_tag="BbuZS7_0041"
/note="identified by match to protein family HMM PF01895;
match to protein family HMM TIGR02135"
/codon_start=1
/transl_table=11
/product="phosphate transport system regulatory protein
PhoU"
/protein_id="YP_002374575.1"
/db_xref="GI:218249689"
/db_xref="GeneID:7106170"
/translation="MIRRKLTKQLEIIKDYLWDMKECVLKIIDDSLIALESKDKNLAK
KIINEDEKIIDDYQYDIEDLCGRIIATEHPVATELREILAIIKIISSLERIADHATKI
VKVVLLLESDLDDFDFLNLYFKPLREMADTAKEMLSDIFDAYFDGDFTKILKIVKYDN
IIDKLFSKQKSIVIDAMKKNPENLDYLLNILFLNSFLERVGDHVATIGELLYFIRIGE
KVNLT"
misc_feature complement(40725..41375)
/gene="phoU"
/locus_tag="BbuZS7_0041"
/note="phosphate transport system regulatory protein PhoU;
Region: phoU_full; TIGR02135"
/db_xref="CDD:162721"
misc_feature complement(41067..41336)
/gene="phoU"
/locus_tag="BbuZS7_0041"
/note="PhoU domain; Region: PhoU; pfam01895"
/db_xref="CDD:202032"
misc_feature complement(40752..41009)
/gene="phoU"
/locus_tag="BbuZS7_0041"
/note="PhoU domain; Region: PhoU; pfam01895"
/db_xref="CDD:202032"
gene complement(41395..42435)
/locus_tag="BbuZS7_0042"
/db_xref="GeneID:7106149"
CDS complement(41395..42435)
/locus_tag="BbuZS7_0042"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374576.1"
/db_xref="GI:218249580"
/db_xref="GeneID:7106149"
/translation="MIRKYLIYISLLFIVFEVYSKPAFISQDDSYELDFSSGEVDISV
NTNSKFNLSFKDESWIYIKSIENEAFIKLIGESYDNGAVFTFQTFKKEGKIKLVFTYQ
NVKDSSEFNKIIILKITKNFEVAIPQGVGSGSSRDNNIESGNNLELGGGSISGATSKE
IIVRALNLSYINDYKGAIDLLNKYNFNDDKYILLKAEIHYKNGDYLKSYENYLKLKSK
YFQSIVFDLIRLGIELNIKEEVLENARYLVEKNVDFSESIYLEIFEFLVTRGEHEFAL
NFSSLYFPKYINSSFSDKYSYLLGKLYESESKHKDFLKALYYYKLVIDNYPFSYYYER
AKIRYLFLKRFF"
gene complement(42432..42833)
/locus_tag="BbuZS7_0043"
/db_xref="GeneID:7106831"
CDS complement(42432..42833)
/locus_tag="BbuZS7_0043"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374577.1"
/db_xref="GI:218249364"
/db_xref="GeneID:7106831"
/translation="MQDRKFSFRKYFLISVFLIFIVSGITYFYSTQMLEKSQKCVEDN
LDAKVKLVDMEDFYFDLNECLNMDDFFIPRPDFLNENLNKNLVVDGLIKNKFLDENFF
KDLWIKKENLFNVDIEKENEKLIDKILEISK"
gene complement(42859..45306)
/locus_tag="BbuZS7_0044"
/db_xref="GeneID:7106661"
CDS complement(42859..45306)
/locus_tag="BbuZS7_0044"
/note="identified by match to protein family HMM PF02463"
/codon_start=1
/transl_table=11
/product="P115 protein"
/protein_id="YP_002374578.1"
/db_xref="GI:218249696"
/db_xref="GeneID:7106661"
/translation="MVLKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAV
RFCMGEDNLKFLRVEDISDLISVSKLGKSNFAEITLFFSNINSEKSTLKEFNEDFYIR
RRLYKDGSSEYYFNNKILNFQDYNRLLNSFKFKKSPYMFITQGRVEDISLERNVNLKS
LIEQASGIDILKMEEEEALKNFKQSSQNLSSLLSLQENLRQKYDNIKNVFLLRKKYQD
LSQKLEALEKTITLKKLFNINFDLNVLKSELNLDGLSKFLSSGFKEKLEFYSFREKNV
INNIQELEKDLELMKSKILGLEIKIQKLEQEKTLKMNLEDKFVKSKSESEEKKNSINN
NLYQLNSLLKEKKNDFFSLSDEINRYTKSFFELVDLILSVLRSAKSEEFVLLKEHILD
SLKLFEESLSIKYIKEIRVNLIKYISKDENLLALLRDKIEPIFDQNVNLKKFLLEKNA
LKSNLAKEITNIERLIEEKTLQLNDVLGELEYIELSKFKNLDEIKLIDGNLEFLFESK
NSLDEELKDLYLKLENLNLEKSDIQLNLSNLIGASKFSSEPFKEKDFNSLVFLNDFKK
TNYYEYIKKQTEYEFLLNSNVSIKSEIENFNVSNEMSDKFELEEDLATRELLRKEIDA
IKLGDYVFFNIDKEFDETKERFEKVSLQVEDLKLSKYSLQKLQKKIKNEIYKKFRESF
DEINKNFSFFFKKIFKGTASLFYNENTDNVEIRINFSNKFVKNNNMLSGGESTLVSMA
FLFALYYYSPACFCMLDEIDAALDFENSKKLSLLLRELGKKIQLLVITHNAYVSEGGE
NLIGITLDNGESRVFNI"
misc_feature complement(<43855..45306)
/locus_tag="BbuZS7_0044"
/note="Chromosome segregation ATPases [Cell division and
chromosome partitioning]; Region: Smc; COG1196"
/db_xref="CDD:31389"
misc_feature complement(<45037..45300)
/locus_tag="BbuZS7_0044"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(45193..45216)
/locus_tag="BbuZS7_0044"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(45190..45198,45202..45207))
/locus_tag="BbuZS7_0044"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(42883..>44211)
/locus_tag="BbuZS7_0044"
/note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
pfam02463"
/db_xref="CDD:202246"
misc_feature complement(42874..>43161)
/locus_tag="BbuZS7_0044"
/note="Barmotin is a tight junction-associated protein
expressed in rat epithelial cells which is thought to have
an important regulatory role in tight junction barrier
function. Barmotin belongs to the SMC protein family.
SMC proteins are large; Region: ABC_SMC_barmotin; cd03278"
/db_xref="CDD:73037"
misc_feature complement(43093..43122)
/locus_tag="BbuZS7_0044"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73037"
misc_feature complement(43033..43050)
/locus_tag="BbuZS7_0044"
/note="Walker B; other site"
/db_xref="CDD:73037"
misc_feature complement(43015..43026)
/locus_tag="BbuZS7_0044"
/note="D-loop; other site"
/db_xref="CDD:73037"
misc_feature complement(42934..42954)
/locus_tag="BbuZS7_0044"
/note="H-loop/switch region; other site"
/db_xref="CDD:73037"
gene 45398..45943
/gene="rnhB"
/locus_tag="BbuZS7_0045"
/db_xref="GeneID:7106868"
CDS 45398..45943
/gene="rnhB"
/locus_tag="BbuZS7_0045"
/EC_number="3.1.26.4"
/note="RNH2; RNase HII; binds manganese; endonuclease
which specifically degrades the RNA of RNA-DNA hybrids"
/codon_start=1
/transl_table=11
/product="ribonuclease HII"
/protein_id="YP_002374579.1"
/db_xref="GI:218249357"
/db_xref="GeneID:7106868"
/translation="MICGIDEVGRGCIFGPILSAAVVFKKKPSFIKELDDSKKLKKEK
REYLSSLILKNSYYAFAEISNITIEKINIHNASLLAMQTAYENLKLNCSLVLVDGKFV
PKITAKNVKAIIKGDSIIDEIKAASIIAKVKRDKLMDEYDKIYPLYLLKKNKGYPTKE
HKNAIKKYGVLSLHRKNFKLI"
misc_feature 45404..45940
/gene="rnhB"
/locus_tag="BbuZS7_0045"
/note="bacterial Ribonuclease HII-like; Region:
RNase_HII_bacteria_HII_like; cd07182"
/db_xref="CDD:187695"
misc_feature order(45413..45424,45614..45622,45629..45631,45689..45691,
45731..45733,45788..45790)
/gene="rnhB"
/locus_tag="BbuZS7_0045"
/note="RNA/DNA hybrid binding site [nucleotide binding];
other site"
/db_xref="CDD:187695"
misc_feature order(45413..45418,45689..45691,45746..45748)
/gene="rnhB"
/locus_tag="BbuZS7_0045"
/note="active site"
/db_xref="CDD:187695"
gene complement(45963..46331)
/locus_tag="BbuZS7_0046"
/db_xref="GeneID:7106654"
CDS complement(45963..46331)
/locus_tag="BbuZS7_0046"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374580.1"
/db_xref="GI:218249491"
/db_xref="GeneID:7106654"
/translation="MGERGEVYSEKLFTESERTYFFNVKENRKGDYFLNIVESKRSPS
GDFERHSIFVYEENINEFESNLLKAIAVIKQKVSTGSVGSSARHNKGYGEYGERSKLD
DSRFDKKSHLSGGRFKKKDY"
misc_feature complement(45999..46331)
/locus_tag="BbuZS7_0046"
/note="Protein of unknown function (DUF3276); Region:
DUF3276; pfam11680"
/db_xref="CDD:204708"
gene 46482..46556
/locus_tag="BbuZS7_0047"
/db_xref="GeneID:7106568"
tRNA 46482..46556
/locus_tag="BbuZS7_0047"
/product="tRNA-Gly"
/db_xref="GeneID:7106568"
gene complement(46640..47001)
/locus_tag="BbuZS7_0050"
/db_xref="GeneID:7106298"
tmRNA complement(46640..47001)
/locus_tag="BbuZS7_0050"
/db_xref="GeneID:7106298"
gene 47119..47793
/locus_tag="BbuZS7_0051"
/db_xref="GeneID:7106701"
CDS 47119..47793
/locus_tag="BbuZS7_0051"
/note="identified by match to protein family HMM PF02592;
match to protein family HMM TIGR00697"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="YP_002374581.1"
/db_xref="GI:218249351"
/db_xref="GeneID:7106701"
/translation="MFNEFLWFGVLFTTYSFLIIVSIFFKKNGLFAWVAVAIIIANIQ
VLKQITIFGINATLGNIIYTSSYIATDMLSEFYGEKTSKKAVYIGFISFIIFAVLTNA
QIHFMSNRTQENFKSLGNIFSSMPALLLASLVAYLISQLNDVYLYRLIKKKFPRFLFF
RTNGSTLISGLIDTTIFVGIATYFKVFPKQAFLNIAIFTYVIKAVAGVLGTPFIYFAK
YIKLEK"
misc_feature 47191..47790
/locus_tag="BbuZS7_0051"
/note="Uncharacterized ACR, YhhQ family COG1738; Region:
DUF165; cl00756"
/db_xref="CDD:193931"
gene 47857..48558
/locus_tag="BbuZS7_0052"
/db_xref="GeneID:7106648"
CDS 47857..48558
/locus_tag="BbuZS7_0052"
/note="identified by match to protein family HMM PF02592;
match to protein family HMM TIGR00697"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374582.1"
/db_xref="GI:218249527"
/db_xref="GeneID:7106648"
/translation="MNKDMFDLSLWTGMFLFIYTALGILYRFFGKSGLFCFNAIISTM
SNIIILRNLKIFGMSLNLSGITFLSAAFSLNLMVEKYSKKEATKSVVLSLLLNITFTI
MLYFTILFNHNKLDTADIHLKILFNNSTYILTILIGTYVFFLSQYTNILLYNYFKQIK
IKSLWIIHPLSRLISGYLANFLVSISINTILKFYPETKNIELTKGSLIITLIIIAIDT
IFYLFINSWKKIKEA"
misc_feature 47872..48456
/locus_tag="BbuZS7_0052"
/note="Uncharacterized member of the PurR regulon [General
function prediction only]; Region: yhhQ; COG1738"
/db_xref="CDD:31924"
gene complement(48555..49211)
/locus_tag="BbuZS7_0053"
/db_xref="GeneID:7106604"
CDS complement(48555..49211)
/locus_tag="BbuZS7_0053"
/EC_number="2.1.1.-"
/note="identified by match to protein family HMM PF00588"
/codon_start=1
/transl_table=11
/product="tRNA/rRNA methyltransferase"
/protein_id="YP_002374583.1"
/db_xref="GI:218249703"
/db_xref="GeneID:7106604"
/translation="MDDDVLKRIGVLSKFITDEKKARIEKVLNLRTNYLTFVLEDIFQ
SQNASATIRTGEILGLSDVHVIEKKNKHTLNPDVTLGSSQWINLNKYKNAKFAIDRLK
SDGYSIVATSLNPKSINLENLTINNKMAIFFGTELTGLSAEVLGAADLYVKIPMYGFT
QSYNISVAVAIVMYSLLMRLRKSSIDYLLNEAEKSNLRLKYYRQVVKNYQFIENLINS
"
misc_feature complement(48666..>49133)
/locus_tag="BbuZS7_0053"
/note="rRNA methylases [Translation, ribosomal structure
and biogenesis]; Region: SpoU; COG0566"
/db_xref="CDD:30912"
misc_feature complement(48690..49109)
/locus_tag="BbuZS7_0053"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
pfam00588"
/db_xref="CDD:201328"
gene 49293..49964
/gene="ung"
/locus_tag="BbuZS7_0054"
/db_xref="GeneID:7106876"
CDS 49293..49964
/gene="ung"
/locus_tag="BbuZS7_0054"
/EC_number="3.2.2.-"
/note="Excises uracil residues from the DNA which can
arise as a result of misincorporation of dUMP residues by
DNA polymerase or due to deamination of cytosine"
/codon_start=1
/transl_table=11
/product="uracil-DNA glycosylase"
/protein_id="YP_002374584.1"
/db_xref="GI:218249579"
/db_xref="GeneID:7106876"
/translation="MKVKIEESWKEVLNNEFNKEYFKKLVKFIKHEYKTKNGKIFPPP
KLIFNAFNSLPFKDIKVVIIGQDPYHGKNQANGLAFSVDSKIKIPPSLQNIFKEIEKS
LKIKTIPNGDLKRWAIQGVFLINTILTVEEGKPSSHKAIGWEIFTDEVIKIISKNLKN
IVFMLWGNLARSKKGLIDPTKHLILETSHPSPYSANNGFLGSNHFSSALDYLKKHNKN
IINFQ"
misc_feature 49350..49955
/gene="ung"
/locus_tag="BbuZS7_0054"
/note="Family 1 of Uracil-DNA glycosylase (UDG) enzymes;
Region: UDG_F1; cd10027"
/db_xref="CDD:198425"
misc_feature order(49485..49499,49527..49532,49563..49565,49665..49667,
49857..49859)
/gene="ung"
/locus_tag="BbuZS7_0054"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:198425"
misc_feature order(49488..49493,49497..49502,49557..49565,49791..49796,
49854..49859,49863..49874)
/gene="ung"
/locus_tag="BbuZS7_0054"
/note="active site"
/db_xref="CDD:198425"
misc_feature order(49488..49490,49497..49505,49557..49565,49692..49697,
49791..49796,49857..49859,49863..49871)
/gene="ung"
/locus_tag="BbuZS7_0054"
/note="UGI interface [polypeptide binding]; other site"
/db_xref="CDD:198425"
misc_feature order(49491..49493,49857..49859)
/gene="ung"
/locus_tag="BbuZS7_0054"
/note="catalytic site [active]"
/db_xref="CDD:198425"
gene complement(50064..50426)
/gene="secG"
/locus_tag="BbuZS7_0055"
/db_xref="GeneID:7106830"
CDS complement(50064..50426)
/gene="secG"
/locus_tag="BbuZS7_0055"
/note="identified by match to protein family HMM PF03840;
match to protein family HMM TIGR00810"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecG"
/protein_id="YP_002374585.1"
/db_xref="GI:218249682"
/db_xref="GeneID:7106830"
/translation="MDLVRFFIFIIFVIVSIFIILLVLIQDEQGDGIGGVFGGGSSSI
FGAKSSSVAVKITGFFIALFFIFVVLLSFLNTRRADDSFLNDIKTENKNSSTFWDDEN
SESDANINEIKENNLKEK"
gene complement(50442..51203)
/gene="tpiA"
/locus_tag="BbuZS7_0056"
/db_xref="GeneID:7106142"
CDS complement(50442..51203)
/gene="tpiA"
/locus_tag="BbuZS7_0056"
/EC_number="5.3.1.1"
/note="Reversibly isomerizes the ketone sugar
dihydroxyacetone phosphate to the aldehyde sugar
glyceraldehyde-3-phosphate"
/codon_start=1
/transl_table=11
/product="triosephosphate isomerase"
/protein_id="YP_002374586.1"
/db_xref="GI:218249790"
/db_xref="GeneID:7106142"
/translation="MRKTFLAGNWKMHYTSAEASIVAKKIATEVKTLKDDVVIMITPP
FTALSKVSECIKGSNILLGAQNMSYMESGARTSEISPSMLLEFGVEYVILGHSECRLY
LAETDEIINKKILAGLKHPFKYLILCVGETLDERDSGKTLEVVLNQVKKGLNCVSESD
IQRIILAYEPVWAIGTGKTATKEEAEEVHKAIRLEITKLYSKSASDNIIIQYGGSVNS
NNVKELMNEPNIDGALIGGASLKAESFLSIINNVL"
misc_feature complement(50454..51197)
/gene="tpiA"
/locus_tag="BbuZS7_0056"
/note="triosephosphate isomerase; Provisional; Region:
PRK14567"
/db_xref="CDD:173031"
misc_feature complement(50454..51191)
/gene="tpiA"
/locus_tag="BbuZS7_0056"
/note="Triosephosphate isomerase (TIM) is a glycolytic
enzyme that catalyzes the interconversion of
dihydroxyacetone phosphate and
D-glyceraldehyde-3-phosphate. The reaction is very
efficient and requires neither cofactors nor metal ions.
TIM, usually...; Region: TIM; cd00311"
/db_xref="CDD:73362"
misc_feature complement(order(50493..50498,50502..50504,50559..50561,
50679..50681,50697..50699,50916..50918,51171..51173,
51177..51179))
/gene="tpiA"
/locus_tag="BbuZS7_0056"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73362"
misc_feature complement(order(50907..50912,50943..50948,50955..50957,
51009..51011,51048..51050,51057..51059,51063..51071,
51168..51170,51177..51179))
/gene="tpiA"
/locus_tag="BbuZS7_0056"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:73362"
misc_feature complement(order(50697..50699,50916..50918,51171..51173))
/gene="tpiA"
/locus_tag="BbuZS7_0056"
/note="catalytic triad [active]"
/db_xref="CDD:73362"
gene complement(51205..52386)
/gene="pgk"
/locus_tag="BbuZS7_0057"
/db_xref="GeneID:7106167"
CDS complement(51205..52386)
/gene="pgk"
/locus_tag="BbuZS7_0057"
/EC_number="2.7.2.3"
/note="Converts 3-phospho-D-glycerate to
3-phospho-D-glyceroyl phosphate during the glycolysis
pathway"
/codon_start=1
/transl_table=11
/product="phosphoglycerate kinase"
/protein_id="YP_002374587.1"
/db_xref="GI:218249895"
/db_xref="GeneID:7106167"
/translation="MSIKTVKDFSSFAGKRALVRCDFNVPLKEGSISDDTRIRAALST
IEYLKERGARIVLVSHLGRPDGKKNSKYSLKPVANRLSELLGQDVKMLSDCIGSEVVN
STLQMKDGDVVLLENVRFYAEEEKNDKNFAKKLSENGDVFVNDAFGAAHRAHASTVGV
ADYLPSVGGFLMEKEDKFLGGILKNPERPFVSIIGGSKVSSKIAVLESLLSKSNVVVI
GGGMAYTFLHSEGYSIGKSLLEDEYIGIASSFLKKAKELGVKVILPLDHIVADDFNKN
SIPEYINSFNIPENKIGMDIGANTLKEIEKVVKTAKTIIWNGPLGVFEFDSFSKGTAK
VAEMVASCSGLTVVGGGDSVAAVNKFNLSDKITHVSTGGGASLEYLEGRILPGIKVLE
N"
misc_feature complement(51238..52374)
/gene="pgk"
/locus_tag="BbuZS7_0057"
/note="Phosphoglycerate kinase; Region: PGK; pfam00162"
/db_xref="CDD:201047"
misc_feature complement(51208..52350)
/gene="pgk"
/locus_tag="BbuZS7_0057"
/note="Phosphoglycerate kinase (PGK) is a monomeric enzyme
which catalyzes the transfer of the high-energy phosphate
group of 1,3-bisphosphoglycerate to ADP, forming ATP and
3-phosphoglycerate. This reaction represents the first of
the two substrate-level...; Region:
Phosphoglycerate_kinase; cd00318"
/db_xref="CDD:29400"
misc_feature complement(order(52030..52032,52207..52209,52276..52278,
52315..52317,52321..52323))
/gene="pgk"
/locus_tag="BbuZS7_0057"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29400"
misc_feature complement(order(51274..51282,51829..51840))
/gene="pgk"
/locus_tag="BbuZS7_0057"
/note="hinge regions; other site"
/db_xref="CDD:29400"
misc_feature complement(order(51328..51336,51415..51426,51430..51432,
51436..51438,51508..51510,51724..51726))
/gene="pgk"
/locus_tag="BbuZS7_0057"
/note="ADP binding site [chemical binding]; other site"
/db_xref="CDD:29400"
misc_feature complement(51331..51333)
/gene="pgk"
/locus_tag="BbuZS7_0057"
/note="catalytic site [active]"
/db_xref="CDD:29400"
gene complement(52406..53413)
/gene="gap"
/locus_tag="BbuZS7_0058"
/db_xref="GeneID:7106354"
CDS complement(52406..53413)
/gene="gap"
/locus_tag="BbuZS7_0058"
/EC_number="1.2.1.-"
/note="identified by match to protein family HMM PF00044;
match to protein family HMM PF02800; match to protein
family HMM TIGR01534"
/codon_start=1
/transl_table=11
/product="glyceraldehyde-3-phosphate dehydrogenase"
/protein_id="YP_002374588.1"
/db_xref="GI:218249560"
/db_xref="GeneID:7106354"
/translation="MKLAINGFGRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKY
DSTFGVYNKKVESRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATS
DKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAP
LAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVG
LVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGIL
GYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLV
K"
misc_feature complement(52958..53413)
/gene="gap"
/locus_tag="BbuZS7_0058"
/note="Glyceraldehyde 3-phosphate dehydrogenase, NAD
binding domain; Region: Gp_dh_N; pfam00044"
/db_xref="CDD:200954"
misc_feature complement(52430..53410)
/gene="gap"
/locus_tag="BbuZS7_0058"
/note="glyceraldehyde-3-phosphate dehydrogenase, type I;
Region: GAPDH-I; TIGR01534"
/db_xref="CDD:211668"
misc_feature complement(52466..52942)
/gene="gap"
/locus_tag="BbuZS7_0058"
/note="Glyceraldehyde 3-phosphate dehydrogenase,
C-terminal domain; Region: Gp_dh_C; pfam02800"
/db_xref="CDD:202402"
gene complement(53486..55456)
/locus_tag="BbuZS7_0059"
/db_xref="GeneID:7106810"
CDS complement(53486..55456)
/locus_tag="BbuZS7_0059"
/note="identified by match to protein family HMM PF00515;
match to protein family HMM PF07719"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374589.1"
/db_xref="GI:218249254"
/db_xref="GeneID:7106810"
/translation="MNFNWFLMLFLFNFSVLLGSDTTALGHYQRANEYYLSKRYYDAI
DELVEAIKINPNYYEAYKFIASIYYSLKIYTQAQFFIEKASKMSNEDTEYKILYANIL
LKNDKINQAKKIYSEVLVKQRNNIDALVGLASIFEKNGLFIAAANYYLSILDYSQNNY
SAFEHLIDIYQRLGMHDKIRHLINKVRVNFLSFPDFHKRVAEFYISINNLGLAEKYAL
NYLALIESSYKDFGVVDAYRLLALVYLHEFKYEDAIEALQKAILVNKDSDELYYLLGY
SYLRFGDIEKAILNLERAKNLKKDLEFYNIALEESFFASNFRNFLKNNSNARISKHYE
NEGLKAFKSLNLNKALFNAKNAVDIWPDNDSARFLLSKIYKLMNLDIMAYEQLFYLAK
QRNSTDSRILDFYDVVSFDVRKSLFYKYGYKSIADFNKLYDDRVVYKMAIFTQSENKF
FGANDLILRYAERVLERNLNMEIVNYNFDYNKNRDYLINNFSEGFSYSRNNNLDLFLI
FDFKADILKNTATLVVNIFSGKTGIKLVSFSYDVGGVNYLSNALNSLSKDFHDYLPKK
GKILQIKNDDALINLGQVNGVVKGDVFLILKEGALNSDTRDSGFIVYKKSDILGEILI
EDISDYISRGIVKSSTFLKDYVQEGATVLIKR"
misc_feature complement(55085..55375)
/locus_tag="BbuZS7_0059"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(55142..55147,55154..55159,55166..55171,
55247..55252,55259..55264,55268..55273,55358..55363,
55370..55375))
/locus_tag="BbuZS7_0059"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(55181..55375)
/locus_tag="BbuZS7_0059"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:205610"
misc_feature complement(order(55103..55105,55112..55114,55124..55126,
55160..55162,55205..55207,55214..55216,55226..55228,
55262..55264,55307..55309,55316..55318,55328..55330,
55364..55366))
/locus_tag="BbuZS7_0059"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(54899..55162)
/locus_tag="BbuZS7_0059"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cl02429"
/db_xref="CDD:207591"
misc_feature complement(order(54899..54901,54908..54910,54920..54922,
54956..54958,55001..55003,55010..55012,55022..55024,
55058..55060,55103..55105,55112..55114,55124..55126,
55160..55162))
/locus_tag="BbuZS7_0059"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(order(54938..54943,54950..54955,54962..54967,
55043..55048,55055..55060,55064..55069,55154..55159))
/locus_tag="BbuZS7_0059"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(54557..54865)
/locus_tag="BbuZS7_0059"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(54614..54619,54626..54631,54638..54643,
54719..54724,54731..54736,54740..54745,54848..54853,
54860..54865))
/locus_tag="BbuZS7_0059"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(54575..54577,54584..54586,54596..54598,
54632..54634,54677..54679,54686..54688,54698..54700,
54734..54736,54797..54799,54806..54808,54818..54820,
54854..54856))
/locus_tag="BbuZS7_0059"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(54560..54754)
/locus_tag="BbuZS7_0059"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
gene complement(55453..56232)
/locus_tag="BbuZS7_0060"
/db_xref="GeneID:7106463"
CDS complement(55453..56232)
/locus_tag="BbuZS7_0060"
/note="identified by match to protein family HMM PF00571;
match to protein family HMM PF03471"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374590.1"
/db_xref="GI:218249741"
/db_xref="GeneID:7106463"
/translation="MLGFFNFKNKKKKKGSPENDLEDKSNIETSLIKNFNALKETIVK
EIMIPRIGVIFVDYAKSKDELLKVVTSSSHSRFPVYHGTIDNIVGIIHTRDILLHMCK
KDFYEIDLKDIMRKVMFVPESKKTDSLLKEFQENHVHIAIVVDEYGGVSGLVTLEDIL
EEIVGDIQDEFDNELDEIVRLDDGSYLCDARILIEDLNEKLNLNLPNGDFDTLGGFVY
DLFGRIPLKNEKVEYNNLVFSIKNMHQRNIKVIKISEKEGL"
misc_feature complement(55753..56106)
/locus_tag="BbuZS7_0060"
/note="FOG: CBS domain [General function prediction only];
Region: COG0517"
/db_xref="CDD:30863"
misc_feature complement(55747..56076)
/locus_tag="BbuZS7_0060"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains associated
with the CorC_HlyC domain. CorC_HlyC is a transporter
associated domain. This small domain is found in Na+/H+
antiporters, in proteins involved in...; Region:
CBS_pair_CorC_HlyC_assoc; cd04590"
/db_xref="CDD:73090"
misc_feature complement(55471..55698)
/locus_tag="BbuZS7_0060"
/note="Transporter associated domain; Region: CorC_HlyC;
smart01091"
/db_xref="CDD:198159"
gene complement(56233..56700)
/locus_tag="BbuZS7_0061"
/db_xref="GeneID:7106914"
CDS complement(56233..56700)
/locus_tag="BbuZS7_0061"
/note="identified by match to protein family HMM PF02130;
match to protein family HMM TIGR00043"
/codon_start=1
/transl_table=11
/product="metalloprotease"
/protein_id="YP_002374591.1"
/db_xref="GI:218249454"
/db_xref="GeneID:7106914"
/translation="MSKSDLNLLVENIKFEHLNVFYDFVVSVLNALSISDFELSVILC
DNAYIQELNNKFRNKNEPTDVLSFNYNEHNELNEDLVDGINYKIQGDLVISFEYLKFS
AQEFNVEIYEELQRVTIHGILHLMGYKHETNDFQKEGMLILQENILKENKRVF"
misc_feature complement(56251..56688)
/locus_tag="BbuZS7_0061"
/note="metal-binding heat shock protein; Provisional;
Region: PRK00016"
/db_xref="CDD:178796"
gene complement(56784..57137)
/gene="trx"
/locus_tag="BbuZS7_0062"
/db_xref="GeneID:7106448"
CDS complement(56784..57137)
/gene="trx"
/locus_tag="BbuZS7_0062"
/note="identified by match to protein family HMM PF00085;
match to protein family HMM TIGR01068"
/codon_start=1
/transl_table=11
/product="thioredoxin"
/protein_id="YP_002374592.1"
/db_xref="GI:218249815"
/db_xref="GeneID:7106448"
/translation="MAISLTEEDFVVKVFDYKNNKEWSFRGDRPAIIDFYANWCGPCK
MLSPIFEKLSKKYENSIDFYKVDTDKEQDISSAIGVQSLPTILFIPIDGKPKVSVGFL
QEDAFENIIKDFFGF"
misc_feature complement(56802..57059)
/gene="trx"
/locus_tag="BbuZS7_0062"
/note="TRX family; composed of two groups: Group I, which
includes proteins that exclusively encode a TRX domain;
and Group II, which are composed of fusion proteins of TRX
and additional domains. Group I TRX is a small ancient
protein that alter the redox...; Region: TRX_family;
cd02947"
/db_xref="CDD:48496"
misc_feature complement(order(57009..57011,57018..57020))
/gene="trx"
/locus_tag="BbuZS7_0062"
/note="catalytic residues [active]"
/db_xref="CDD:48496"
gene 57211..57927
/locus_tag="BbuZS7_0063"
/db_xref="GeneID:7106195"
CDS 57211..57927
/locus_tag="BbuZS7_0063"
/EC_number="2.1.1.-"
/note="in Escherichia coli RsmE methylates the N3 position
of the U1498 base in 16S rRNA; cells lacking this function
can grow, but are outcompeted by wild-type; SAM-dependent
m(3)U1498 methyltransferase"
/codon_start=1
/transl_table=11
/product="16S ribosomal RNA methyltransferase RsmE"
/protein_id="YP_002374593.1"
/db_xref="GI:218249710"
/db_xref="GeneID:7106195"
/translation="MNLMLITFNEFKTGISLNDTRAEHLVKILKLKDNDKFKFGILGE
KNIYHCIYKKDKKLFFKKIFKIGESNKLKKLYVLIGMIRPIVAKRIIKELASIGTYKI
IFFNTELTEKSYLNSKIFKNNDCEKHLIAGAMQGKITYLPKIKIIKNLKDSLKYIQQE
NFEIKILLEKNSEKNLIDIEQINNAAIIVGPERGFTEKEKQLIAQYNFSPYSISSNTL
RTETATIAASIITASKLINM"
misc_feature 57211..57924
/locus_tag="BbuZS7_0063"
/note="RNA methyltransferase, RsmE family; Region:
TIGR00046"
/db_xref="CDD:129157"
misc_feature 57211..57873
/locus_tag="BbuZS7_0063"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG1385"
/db_xref="CDD:31575"
gene complement(57981..58934)
/locus_tag="BbuZS7_0064"
/db_xref="GeneID:7106883"
CDS complement(57981..58934)
/locus_tag="BbuZS7_0064"
/note="identified by match to protein family HMM PF03793"
/codon_start=1
/transl_table=11
/product="pasta domain protein"
/protein_id="YP_002374594.1"
/db_xref="GI:218249965"
/db_xref="GeneID:7106883"
/translation="MLILPKTTIKALLLVIFGSLIISFAIFFMVLENNEITVVPNLYS
LAIEDAVLELQRKELIPHIEFKFSSSALDKGKVIDQGPKPGTVLRHGNKVIIFISKGA
IINRVDSFIGKNIDDVIINLKANSFDNSKLLYHIAQPLEVESELPKGIIISQNPSPGS
QISSLTDLQFLISKGKDYLDKHVKNYVGIYYKDAIASLLSDSINFDIDLANIGDFGNI
ISQSIPPGTKINESDKILITIAKPKVDNKIVFGILTYKLRQHPSYVDISVRLKGVDGK
NSLIYSFKSKGGLIKLPYEVNKGSMIELYIYDKLINQTVIN"
misc_feature complement(57984..58907)
/locus_tag="BbuZS7_0064"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG2815"
/db_xref="CDD:32644"
misc_feature complement(58638..58823)
/locus_tag="BbuZS7_0064"
/note="PASTA domain of bacterial serine/threonine kinase
pknB-like proteins. PknB is a member of a group of related
transmembrane sensor kinases present in many gram positive
bacteria, which has been shown to regulate cell shape in
Mycobacterium tubercolosis; Region: PASTA_pknB; cd06577"
/db_xref="CDD:119328"
misc_feature complement(58449..58616)
/locus_tag="BbuZS7_0064"
/note="PASTA domain of bacterial serine/threonine kinase
pknB-like proteins. PknB is a member of a group of related
transmembrane sensor kinases present in many gram positive
bacteria, which has been shown to regulate cell shape in
Mycobacterium tubercolosis; Region: PASTA_pknB; cd06577"
/db_xref="CDD:119328"
misc_feature complement(58212..58397)
/locus_tag="BbuZS7_0064"
/note="PASTA domain; Region: PASTA; smart00740"
/db_xref="CDD:197851"
gene complement(59052..59990)
/gene="fmt"
/locus_tag="BbuZS7_0065"
/db_xref="GeneID:7106271"
CDS complement(59052..59990)
/gene="fmt"
/locus_tag="BbuZS7_0065"
/EC_number="2.1.2.9"
/note="identified by match to protein family HMM PF00551;
match to protein family HMM PF02911; match to protein
family HMM TIGR00460"
/codon_start=1
/transl_table=11
/product="methionyl-tRNA formyltransferase"
/protein_id="YP_002374595.1"
/db_xref="GI:218249868"
/db_xref="GeneID:7106271"
/translation="MKIFFVSSSSIALEVFKEIVKHYEVVGVLTLPDRPKGRGQKLSQ
NVIKSEAIARNIKVLDPLILDDNVLNLVRDLNPDLMLVFSYGKIFKKEFLDLFPKGCI
NVHPSLLPKYRGVSPIQSAILNGDCVSGVTIQSMALEMDSGNILVQKNFKIRSYDTSH
DISKLVSSLSPSLVLEALEKISKGFLGIPQKSSEATFCSFLKKESGFIDFNLSAFEIK
NKINACNPWPLVRVRLDYNDIIFHRADFLEVDLYKERKIGEIVDFNPEKGLFVNTGKG
ILLLLEVQRPGRKVLDFKSFYNGSRQLIGQVFSSIE"
misc_feature complement(59058..59990)
/gene="fmt"
/locus_tag="BbuZS7_0065"
/note="methionyl-tRNA formyltransferase; Region: fmt;
TIGR00460"
/db_xref="CDD:161888"
misc_feature complement(59394..59990)
/gene="fmt"
/locus_tag="BbuZS7_0065"
/note="Methionyl-tRNA formyltransferase, N-terminal
hydrolase domain; Region: FMT_core_Met-tRNA-FMT_N;
cd08646"
/db_xref="CDD:187715"
misc_feature complement(order(59568..59573,59580..59585,59589..59591,
59649..59651,59673..59684,59709..59711,59724..59747,
59955..59960,59970..59972))
/gene="fmt"
/locus_tag="BbuZS7_0065"
/note="putative active site [active]"
/db_xref="CDD:187715"
misc_feature complement(order(59643..59651,59673..59678,59682..59684,
59733..59744,59871..59882,59886..59888,59898..59900,
59958..59960,59964..59969))
/gene="fmt"
/locus_tag="BbuZS7_0065"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187715"
misc_feature complement(order(59568..59573,59580..59585,59682..59684,
59709..59711,59724..59732,59736..59738,59745..59747))
/gene="fmt"
/locus_tag="BbuZS7_0065"
/note="putative cosubstrate binding site; other site"
/db_xref="CDD:187715"
misc_feature complement(order(59568..59570,59676..59678,59682..59684))
/gene="fmt"
/locus_tag="BbuZS7_0065"
/note="catalytic site [active]"
/db_xref="CDD:187715"
misc_feature complement(59115..59381)
/gene="fmt"
/locus_tag="BbuZS7_0065"
/note="C-terminal domain of Formyltransferase and other
enzymes; Region: Met_tRNA_FMT_C; cd08704"
/db_xref="CDD:187732"
misc_feature complement(order(59118..59120,59124..59129,59133..59135,
59139..59141,59271..59273,59277..59279,59310..59312))
/gene="fmt"
/locus_tag="BbuZS7_0065"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187732"
gene complement(59987..60484)
/gene="def"
/locus_tag="BbuZS7_0066"
/note="peptide deformylase; this gene contains a premature
stop which may be the result of sequencing error;
identified by match to protein family HMM PF01327; match
to protein family HMM TIGR00079"
/pseudo
/db_xref="GeneID:7106328"
gene complement(60519..61208)
/locus_tag="BbuZS7_0067"
/db_xref="GeneID:7106399"
CDS complement(60519..61208)
/locus_tag="BbuZS7_0067"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374596.1"
/db_xref="GI:218249184"
/db_xref="GeneID:7106399"
/translation="MRFIIAFLMILNQGFSNLFSLPPEDIIFESSYEVAIKKAQKLNK
NVLILVGRDIKENLIKDFLNSFTNGEIIHKVSRKSVFLVIDKDNEIFNKINLQKSPTI
FFVDSKNEQIKAAYVGAVLSSVQFDKDFLSYVMGTIKSTSVLKKQKDYEINTADGRTF
FYKTLKGDWRLKFNGKDRKLVLFDTDLKEFLVFKDINENKLYAIPKSRIGNIYFSLLG
NEEWKLFGKIK"
gene complement(61205..62983)
/locus_tag="BbuZS7_0068"
/db_xref="GeneID:7106722"
CDS complement(61205..62983)
/locus_tag="BbuZS7_0068"
/note="identified by match to protein family HMM PF00557;
match to protein family HMM PF01321"
/codon_start=1
/transl_table=11
/product="peptidase"
/protein_id="YP_002374597.1"
/db_xref="GI:218249258"
/db_xref="GeneID:7106722"
/translation="MDINKRLALLRDHMRDNGVDAYLVAGYDPHFSEYSHERYSTRKF
ITGFSGSFGTVIITLSKAVLFTDGRYFLQAEQELKGTEIALIKLGVKGSPDIFTYINL
NLKESKLGIYSDEISIKFYKELSEKCKNTHIKALNQDLIDLIWKSRPQLEFSHVFELA
DAEKNNKRAEKIKSIYLILEKNLADFYVITALDEIAWVLNLRGADVEESALFYSFLLI
SRNKNRKNVLFADIKKLDSGVKEALEMENFEIESYSNFYCFLDKIKHEGKFFVSFYAN
VRVLKVLGETNIILGESIISSLKALKTDYELLKMKEAHIIDAIALIKFLRKFKSLSKV
ELSELDEIDIADMLLHFRKSNKDFFSSSFDSIVGFRENGALPHYKPKRGRKINTNGLL
LIDSGGSYFGLGTTDVTRVFLIGDASDEEKRDYTLVLKAFIGLSSLKFPYGSSGAFLD
GICRLPLLKNELNFIHGTGHGVGFFLNVHELPVSISPNSSYLFKGSEVVSIEPGLYRT
FSHGIRIENLVFVRQAFTNDFGAFLEFENLTLVPFEKELIVKEMLSEDELNYINDYHE
CVFLTLKERFDNEGELEFLAKLTSKI"
misc_feature complement(62582..62968)
/locus_tag="BbuZS7_0068"
/note="Creatinase/Prolidase N-terminal domain; Region:
Creatinase_N; pfam01321"
/db_xref="CDD:201727"
misc_feature complement(61331..62434)
/locus_tag="BbuZS7_0068"
/note="Xaa-Pro aminopeptidase [Amino acid transport and
metabolism]; Region: PepP; COG0006"
/db_xref="CDD:30356"
misc_feature complement(61394..62056)
/locus_tag="BbuZS7_0068"
/note="X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also
known as X-Pro aminopeptidase, proline aminopeptidase,
aminopeptidase P, and aminoacylproline aminopeptidase.
Catalyses release of any N-terminal amino acid, including
proline, that is linked with proline; Region: APP;
cd01085"
/db_xref="CDD:29970"
misc_feature complement(order(61436..61438,61478..61480,61562..61564,
61763..61765,61799..61801,61853..61855))
/locus_tag="BbuZS7_0068"
/note="active site"
/db_xref="CDD:29970"
gene 63098..63979
/locus_tag="BbuZS7_0069"
/db_xref="GeneID:7106467"
CDS 63098..63979
/locus_tag="BbuZS7_0069"
/note="identified by match to protein family HMM PF00702;
match to protein family HMM PF08282; match to protein
family HMM TIGR00099; match to protein family HMM
TIGR01484"
/codon_start=1
/transl_table=11
/product="haloacid dehalogenase"
/protein_id="YP_002374598.1"
/db_xref="GI:218249328"
/db_xref="GeneID:7106467"
/translation="MKNIKAVASDLDGTLLLSKSYIGAFTELVIKKLTKEKKKFIIAT
GRSKNEIIQIIKKTDQLQVSFFITLNGAKVYNQEWKLIKSHNLSAEVVKKILNLRDEK
FSHIPHFLHKADQNDDQLNIDIKTKIAIDQCKKLQKESNVFRHEIISPINKIQEIKDF
NELKNFENVAKIILAGGEESLIEYEAMILEKYKGEINAYLSTPNSLEIVDHKVSKGNA
LKEVLKTININLSETIAFGDGFNDTDMLENVKKGLLMGNANYRLKAMLPYLEVIGTND
EEAVANYINENVLEEPI"
misc_feature 63113..>63349
/locus_tag="BbuZS7_0069"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature 63116..63949
/locus_tag="BbuZS7_0069"
/note="haloacid dehalogenase-like hydrolase; Region:
Hydrolase_3; pfam08282"
/db_xref="CDD:203899"
misc_feature order(63125..63133,63227..63232)
/locus_tag="BbuZS7_0069"
/note="active site"
/db_xref="CDD:119389"
misc_feature 63125..63142
/locus_tag="BbuZS7_0069"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature 63227..63229
/locus_tag="BbuZS7_0069"
/note="motif II; other site"
/db_xref="CDD:119389"
misc_feature <63740..63862
/locus_tag="BbuZS7_0069"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:212620"
gene 63989..65227
/locus_tag="BbuZS7_0070"
/db_xref="GeneID:7106622"
CDS 63989..65227
/locus_tag="BbuZS7_0070"
/note="identified by match to protein family HMM PF02073"
/codon_start=1
/transl_table=11
/product="aminopeptidase II"
/protein_id="YP_002374599.1"
/db_xref="GI:218249921"
/db_xref="GeneID:7106622"
/translation="MEKDLIKYAELIILKGINLQKNQCVLIQGSIDNYNFLKILAKKA
YEHGAKYVKLNIKDIDILKSRLKFSQEESLKFIPNAEKSFLEEMVQDKWARINVDDTE
NFEDLKESIGQKMSIYQKALNLASKTLSQAIMSNEIAWCVVCAPGPKWASKVLNKKEG
SQTLEEFFKIQKKILLLDSENPIESWESHGEKLHKRCKTLNELNLEKVIFKTEKTNLE
VYLLETSLWTGGSEKIKGTEIEFNANMPTEEVFTTPNYKKTKGIVYATRPVMVLETLI
YGMWLKFENGKVVDFGCDDEKQKEILKSHIETDIQAKYIGEVALVDSSSPIYQSNLIF
YSTLYDENASCHIALGAAYPSCLSNEEDLKTDADKLTYGCNVSLIHTDLMIGSDDLNV
IGVDKNGKEHTIIKAGKFAI"
misc_feature 63992..65218
/locus_tag="BbuZS7_0070"
/note="Thermophilic metalloprotease (M29); Region:
Peptidase_M29; pfam02073"
/db_xref="CDD:145308"
gene 65242..65703
/locus_tag="BbuZS7_0071"
/db_xref="GeneID:7106381"
CDS 65242..65703
/locus_tag="BbuZS7_0071"
/note="identified by match to protein family HMM PF02681"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374600.1"
/db_xref="GI:218249877"
/db_xref="GeneID:7106381"
/translation="MIRALLTNDLFLSCLVSGISAQVIKYGIQTVKTRKLKLTPVHLL
KKIFLETGGMPSSHSSTVTALSTSIALTEGIDTNFIIALAFALITIRDSFGVRYMSGV
QAEYLNALSEKLKKEIKIDTTKIKVVKGHKKKEVLTGIIIGIVSAYIVCYF"
misc_feature 65242..65700
/locus_tag="BbuZS7_0071"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG1963"
/db_xref="CDD:32146"
gene 65719..67191
/locus_tag="BbuZS7_0072"
/db_xref="GeneID:7106336"
CDS 65719..67191
/locus_tag="BbuZS7_0072"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374601.1"
/db_xref="GI:218249603"
/db_xref="GeneID:7106336"
/translation="MVRFLGFLYLITTIPLIKSCDAAQFGDYKPLYFENENDLKTANE
YINSLGYKTISEYTTKIDILDFPENKEITINEINKLNNLDLRKSIFLKKLSNLFNIEH
KKLLYVENRFKSINFKNLKKELNINADIHSLDYKTKINFISSIIFLIIIILLIFLDPT
NSIFTLIFLLISSLAFMISKEIMYFYPFTVLSYLLFLIISNFNKNYNKIYLKEINFLT
LMTKIKHLLFLFTFTALYFITITTFFTTNIDPTFIAFVAIPTLCIFLIFSWIKTESNF
KDTFLFPIEIKEKKIEGKKALKSKIAIHLLLFTLSLIPFAYSSYMLNSYENINYLYSK
KLNYFDYLNPNNIYIMLGYNKDMPNIIGYLSHILYQNELKYNITAKYGKIPKDIKENY
FEIKNDKIEIHPKTVYEVDKSFIDEILKKDLASLFLKNKNPILIYKENKNNINTDKKN
YKILFFFSLPFFVLLFLFKAIRFTILLNINEKTYKKYIQG"
gene 67199..69520
/locus_tag="BbuZS7_0073"
/db_xref="GeneID:7106855"
CDS 67199..69520
/locus_tag="BbuZS7_0073"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374602.1"
/db_xref="GI:218249693"
/db_xref="GeneID:7106855"
/translation="MLDLEKVKTIFKKYNKYEININEIQIPEYALIPLETENSKSIIY
IIEKQKIEENQILSKNSNIELYTYSPISGIVEKIYTANFPDGKNLKSALIKFQGKIKT
EKTPIEEGASREKTLEKLIQLGIPWFNENSLFQFINKCKKIDKMILLTNGKDAFTNIS
EALMAEKLEEIFSGFQIIDKIFKFKEIIIIISNKDKLKKEFEKLSIFKNRKIKIKSLE
NAYPYTNHEMIMHFLYNNKNTKDDINPHNNILLANIEDLYNANLVIKNNNPYKEKFVA
INGNKKIKSRILKVKIGTSFSQLINEKIDTKKYEIFLNNPANKIKIDTLNIPITRDIY
SLTILKKKSIYDKIKALFISSFAPLQMENIIFSFLKKEKINNSGKLKIFNYTDKEVEE
EIHKVQKEIKSKILNESLTNEAIYTENNLKDIYFAIILSLSPSLIFSFLNNTKFMTDT
LLLIFISVAIYIPIMLKINYKCLSFFVYAALMISIILPLDLEITLKITSLLFTFLVFF
YFFRLSAFLANPILISFMFLVLNFPVSFKQAYQEELKNSNSIIPTWNEIIETNPNIKN
LKSLNTFTRYESKKIDAIENFVNQNIFSAFNIIVTRFHIESLLGVNNEKKISPILLYF
GLLLIVGKYIINKLIPLSFYISLMAISYIAHNIGMLNHISSDMLTLLISPIPMLLIFT
MATELQITPHFKFEQILYGSILAFIYFLTLSYIPFETLSVIISIFILQTSSNLIKKYS
LTFKIKKIMHVLKTNKEKALKTPLENEKDIIKL"
misc_feature 67199..68812
/locus_tag="BbuZS7_0073"
/note="Predicted NADH:ubiquinone oxidoreductase, subunit
RnfC [Energy production and conversion]; Region: RnfC;
COG4656"
/db_xref="CDD:34275"
misc_feature <68753..69340
/locus_tag="BbuZS7_0073"
/note="NQR2, RnfD, RnfE family; Region: NQR2_RnfD_RnfE;
cl00779"
/db_xref="CDD:207197"
gene 69517..70077
/locus_tag="BbuZS7_0074"
/db_xref="GeneID:7106865"
CDS 69517..70077
/locus_tag="BbuZS7_0074"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374603.1"
/db_xref="GI:218249403"
/db_xref="GeneID:7106865"
/translation="MTNNLIACLIINNLTLIHFVGFEDIKIKNNIMLIKRYAIITITS
LLIYSISFYLYKLFAKNNLLFLVPIFYVILIYVLILLFKVLNDLFIVYNKKSNYSNDF
MLSNSSLIAITFFALDKNNGFFEGLEILILSALGILIALMSITSIKKNFDKNPKINIL
ENEPIYFFIIFILSLIPNIIILIYNQ"
gene 70322..71170
/gene="prfB"
/locus_tag="BbuZS7_0075"
/db_xref="GeneID:7106396"
CDS 70322..71170
/gene="prfB"
/locus_tag="BbuZS7_0075"
/note="recognizes the termination signals UGA and UAA
during protein translation a specificity which is
dependent on amino acid residues residing in loops of the
L-shaped tRNA-like molecule of RF2; in some organisms
control of PrfB protein levels is maintained through a +1
ribosomal frameshifting mechanism; this protein is similar
to release factor 1"
/codon_start=1
/transl_table=11
/product="peptide chain release factor 2"
/protein_id="YP_002374604.1"
/db_xref="GI:218249952"
/db_xref="GeneID:7106396"
/translation="MCEIAENEKDTSGLEIEFNTLEKQYKDLLTISYFKEELDANNAF
LTIHSGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAEGGIKSVTIEIKGEYA
YGLLKSEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRA
SGAGGQHVNKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKED
EKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL
KWKSLN"
misc_feature 70328..70648
/gene="prfB"
/locus_tag="BbuZS7_0075"
/note="This domain is found in peptide chain release
factors; Region: PCRF; smart00937"
/db_xref="CDD:198005"
misc_feature 70448..71158
/gene="prfB"
/locus_tag="BbuZS7_0075"
/note="Protein chain release factor B [Translation,
ribosomal structure and biogenesis]; Region: PrfB;
COG1186"
/db_xref="CDD:31379"
misc_feature 70790..71077
/gene="prfB"
/locus_tag="BbuZS7_0075"
/note="RF-1 domain; Region: RF-1; pfam00472"
/db_xref="CDD:201249"
gene 71152..72561
/locus_tag="BbuZS7_0076"
/db_xref="GeneID:7106258"
CDS 71152..72561
/locus_tag="BbuZS7_0076"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374605.1"
/db_xref="GI:218249606"
/db_xref="GeneID:7106258"
/translation="MEKLKLKLAIPLLVFTICKIHSQSNIEYNFSYIINTKKENIDLK
KGIEKQLDKIYDKITEHIVNNDDKSIIEDIYINQDIIKTELEISKLKKEMDKKKLQNI
ITAKEKHNTKTKIDELKKNIQNINNKQKKFAEYFNNLKKLKVKYKKIEEQTNISNLNK
EFFIREELFFINYIDLKKIENYYLLEISNITPEKIETKKAVFKTSSSVNEIADHITKY
SLKEMLGREFLKININVKNNSDAKIYINEKFVSKGIYHDNIFDISKLPNKEIEIQITS
ANFENYSIKRTVKNADSIILDIDLKRTISKKVSIKSNVQSKVFKKGIFMGETPIEIEK
PENQDIILLKSKGYKDKFKLINKEEDQVEIEMIKTNKNRLIDTRDKFYVNLAVFTLST
IGTIFAGTLLNNSEVLYKITGNHFINKRLTAEDIYMAKAEQMTATFLFGVGITLTIGS
FISLITHLVEYIKEANMGE"
gene 72598..73443
/gene="ftsY"
/locus_tag="BbuZS7_0077"
/db_xref="GeneID:7106858"
CDS 72598..73443
/gene="ftsY"
/locus_tag="BbuZS7_0077"
/note="identified by match to protein family HMM PF00448;
match to protein family HMM TIGR00064"
/codon_start=1
/transl_table=11
/product="signal recognition particle-docking protein
FtsY"
/protein_id="YP_002374606.1"
/db_xref="GI:218249622"
/db_xref="GeneID:7106858"
/translation="MGILEKIKNLFKSKQQENVIENLEDILLESDINNEIVIEIINKL
TKEKNENEKTIIGKLKELLSSYINTKKFTLENNKLNILLIVGINGIGKTSSIAKLANK
LKNEGKNILISAADTFRAAAIEQMKIYGEQIGVRIISQNQGSDPSAVIFDSISSAKLK
NYDALIIDTAGRLQNKENLIKELQKINNVILKQIKNTDINYQKILVIDSTIGKNANSQ
AEIFNKAIEIDGIIITKLDSSSKAGTIINISKILEKPIYFTTFGEKLEDIKEFDINEY
FNKLL"
misc_feature 72637..73440
/gene="ftsY"
/locus_tag="BbuZS7_0077"
/note="signal recognition particle-docking protein FtsY;
Region: ftsY; TIGR00064"
/db_xref="CDD:161686"
misc_feature 72874..73371
/gene="ftsY"
/locus_tag="BbuZS7_0077"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
gene 73440..74468
/locus_tag="BbuZS7_0078"
/db_xref="GeneID:7106081"
CDS 73440..74468
/locus_tag="BbuZS7_0078"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374607.1"
/db_xref="GI:218249904"
/db_xref="GeneID:7106081"
/translation="MKKKQLILLLFIPQIIYAKSYFASDVFFNKYQKLNEKPKTGFYI
EYYSIDDTEKLYLYKENNLIKYKTIQIMENTKKITCYDTKDKKRKEEIYDNLNNKIQE
IEYDSKGKILETANYVYENENLISKNLKTINQKPKLIYYSKDDNGKLLKITGSNFQIW
NYGINGDIKSTYFDIKKATTKVIKYDDKKRNSNSTIIVNNKIKSKEKNQYLDEEKIVN
TFEEENTKIISTYKANNLIKEETYKNNELIKVNDFQYNESDMIIFQNTKEKDKDQYTN
TKIEYEYNKDNQLKSKKIYENDIIYLKTEYHNDNEYEEEIYYNKKPALKVKHKNGKVT
EEKPIGTN"
gene 74469..75722
/locus_tag="BbuZS7_0079"
/db_xref="GeneID:7106364"
CDS 74469..75722
/locus_tag="BbuZS7_0079"
/note="identified by match to protein family HMM PF02687"
/codon_start=1
/transl_table=11
/product="lipoprotein releasing factor"
/protein_id="YP_002374608.1"
/db_xref="GI:218249818"
/db_xref="GeneID:7106364"
/translation="MGIRNFLLKRLILEEKNSLALTIVIILSIALGEIIIILTISIMN
GFQNDFFLSITNVESGNLKIENELTQEEIKKIKKIEGIKHINKIYETQGIGIQNYYYP
TILNIIAVDIKDLKKDQNFISFTGLEKDELDLKDNEIIIGNVLSHNFNLFENDPLELI
ITDEIKTLISLENDIKSFKIKSIFKSNYAKINETLIFMNIDYFIKNKILHNSGINYQV
KTKNLNPSNKLIEKIKAVNPKIKAKTWNEYNKEFYKILKIERNTMLIILASIFIVIAV
NTYYLQKRIIINKNKAILILLAMGLRIKKIKQIFFIHSIIICTVGGLLGLTLGISISL
NINEILKIIDNLVNTLINFLNQILALKIDGIKIQIVKNTITPKLFLSDLTFTFCFACF
STMYSSMKATKKIGSQKNIETINGQ"
misc_feature <74787..75719
/locus_tag="BbuZS7_0079"
/note="ABC-type transport system, involved in lipoprotein
release, permease component [Cell envelope biogenesis,
outer membrane]; Region: LolE; COG4591"
/db_xref="CDD:34229"
gene 75724..76404
/locus_tag="BbuZS7_0080"
/db_xref="GeneID:7106198"
CDS 75724..76404
/locus_tag="BbuZS7_0080"
/note="identified by match to protein family HMM PF00005"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002374609.1"
/db_xref="GI:218249272"
/db_xref="GeneID:7106198"
/translation="MENILIIKNLCKAYKKNKTKIQVIENLNLTVEKGEFISIQGKSG
CGKSTLFNMISGIDKIDSGEIISCGIFLKNANEKTLSLYKNRQIGLVFQNYNLINEFS
VIENIILPQIISGQKTKETINKKALDLMKILKIENRANHYPSELSGGESQRVAIARAL
INEPNIILCDEPTGNLDLSTAKTVENLLINTAKNFKKTLILVSHNPQFANKADSKYEF
KDRTLKKL"
misc_feature 75733..76383
/locus_tag="BbuZS7_0080"
/note="ABC-type antimicrobial peptide transport system,
ATPase component [Defense mechanisms]; Region: SalX;
COG1136"
/db_xref="CDD:31331"
misc_feature 75736..76392
/locus_tag="BbuZS7_0080"
/note="This family is comprised of MJ0796 ATP-binding
cassette, macrolide-specific ABC-type efflux carrier
(MacAB), and proteins involved in cell division (FtsE),
and release of liporoteins from the cytoplasmic membrane
(LolCDE). They are clustered together...; Region:
ABC_MJ0796_Lo1CDE_FtsE; cd03255"
/db_xref="CDD:73014"
misc_feature 75844..75867
/locus_tag="BbuZS7_0080"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73014"
misc_feature order(75853..75858,75862..75870,76000..76002,76231..76236,
76333..76335)
/locus_tag="BbuZS7_0080"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73014"
misc_feature 75991..76002
/locus_tag="BbuZS7_0080"
/note="Q-loop/lid; other site"
/db_xref="CDD:73014"
misc_feature 76159..76188
/locus_tag="BbuZS7_0080"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73014"
misc_feature 76219..76236
/locus_tag="BbuZS7_0080"
/note="Walker B; other site"
/db_xref="CDD:73014"
misc_feature 76243..76254
/locus_tag="BbuZS7_0080"
/note="D-loop; other site"
/db_xref="CDD:73014"
misc_feature 76321..76341
/locus_tag="BbuZS7_0080"
/note="H-loop/switch region; other site"
/db_xref="CDD:73014"
gene 76401..77651
/locus_tag="BbuZS7_0081"
/db_xref="GeneID:7106482"
CDS 76401..77651
/locus_tag="BbuZS7_0081"
/note="identified by match to protein family HMM PF02687"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002374610.1"
/db_xref="GI:218249538"
/db_xref="GeneID:7106482"
/translation="MILRLPEITKIAYLIFKNSTNKIALIGSGISLSLVMIPLIIVYY
MSSNIMTSTINKYIESEGFSMQIEYNETNRTHYLKDRLGLLKKKHNYKDLNYFFEKRT
YGIIGNNKKQGVLIRAIENKFILENKSIKLIKGTKNLKKDSILISNQIKNKLNLNLNE
KIDILIPNTKNDKIMPRIKKFNISGIIETGLKDIDNNLVLISFENENLMSKKFSKSII
GLKTNSNSIKNNEILKQNLETEFQEFQIKTFYELYSNKYNNLDISKKLLIFIMALIII
FASINISSSLSMLIFENKKKIAILKSIGMNNLNIKIIFLLISLTLSTIFCGIGIIIGN
YLTLKISYLINFIDNILNFFLKIFGEENSEILNSEYYVSEFQIHLSLSFSLTLLGLYM
LINILTTLIPLNIVSNLKEKEILR"
misc_feature 76401..77471
/locus_tag="BbuZS7_0081"
/note="ABC-type transport system, involved in lipoprotein
release, permease component [Cell envelope biogenesis,
outer membrane]; Region: LolE; COG4591"
/db_xref="CDD:34229"
gene complement(77661..78959)
/locus_tag="BbuZS7_0082"
/db_xref="GeneID:7106788"
CDS complement(77661..78959)
/locus_tag="BbuZS7_0082"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374611.1"
/db_xref="GI:218249261"
/db_xref="GeneID:7106788"
/translation="MNSSKTSEDRIKIYLSKLKKHKNKILSKKSIKNIIEVSDISDND
IENMGLHFRRSYARAKRFVDIGKIDIAFRELESIYFYSLHDKSMFSLFFFLFKEVADK
VNTKESKKKMIHVTLQAKEFGIRDDLDLIDYYEFKKSKNRMLILTISSILIFCISLIT
YRSFQGFMSMNGNGAMALKEKFAPYFTSQGLPPITMAMDLVVEAVNLISSPKDFYYIE
IEDAKVLVFEDAHLYQLKAGVISTMHPVKKISYRVTVYDDLGKSVFNQIFSKESDFSA
KWGKDVYIPIDVISSIPRAIDVNPKRIVLDIIDIDFFENVDDKIGVNLDSDSFILKFK
YIGNYFQKSFGICKANTVIEVFNSSKDVVKNLEIEIGYIDKEGRIIRSLRRKLISSAN
SFLKSKSKQSFTISTIFPNEIYPTIEKDFSSIKIYNVMIK"
gene complement(78952..79272)
/locus_tag="BbuZS7_0083"
/db_xref="GeneID:7106470"
CDS complement(78952..79272)
/locus_tag="BbuZS7_0083"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374612.1"
/db_xref="GI:218249422"
/db_xref="GeneID:7106470"
/translation="MKEVIYRFEKAEDYKLVPVNNIYGNVTNTGEIFCDLVFESTEIS
EEIAYTKTKEGVLEEASKEFKSGEEGKIVLINSFIGISITKTTARNIAYWLLKKVDEL
EDNE"
gene 79454..80722
/locus_tag="BbuZS7_0084"
/db_xref="GeneID:7106416"
CDS 79454..80722
/locus_tag="BbuZS7_0084"
/note="identified by match to protein family HMM PF00266;
match to protein family HMM PF01212"
/codon_start=1
/transl_table=11
/product="aminotransferase class V"
/protein_id="YP_002374613.1"
/db_xref="GI:218249535"
/db_xref="GeneID:7106416"
/translation="MDFKQIKSNVEKVKFLRKDFPILNKKFDNKYIIYFDNAATSQKP
KNVIYSNVEYYENYNANVHRSGHKFAIQSSIKIEKTRELVKNFINAESAKNIIFTSGT
TDGINTIASSFFYSKYFKKKDEIILTTLEHNSNLLPWVNLANLANLKIKLAKFNEMGI
ITPEEIEKLITEKTKLISISGINNTLGTINDLESIGKIAKKYNICLFVDAAQMAPHIK
IDVKKIGCDFLVFSGHKMLAPTGIGILYISNNMAEKLHSSKLGGNTVEEIFIENEKIK
FKASDSPNKFESGTPNIAGIIGLEEAIKYIDNISMDFILEHDKQLIEYGVKKLQELDE
VEFILNTNLKRNSIISFTVKNIHSHDIETYLDTMGIATRAGRTCSYVAFFPENLNKDH
LLRISFYFYNTQEEIDNFILGLKKVIKELS"
misc_feature 79499..80710
/locus_tag="BbuZS7_0084"
/note="Selenocysteine lyase/Cysteine desulfurase
[Posttranslational modification, protein turnover,
chaperones]; Region: csdA; COG0520"
/db_xref="CDD:30866"
misc_feature 79550..80695
/locus_tag="BbuZS7_0084"
/note="Cysteine desulfurase (SufS)-like. This family
belongs to the pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The major
groups in this CD correspond to cysteine desulfurase
(SufS) and selenocysteine lyase. SufS...; Region:
SufS_like; cd06453"
/db_xref="CDD:99746"
misc_feature order(79757..79762,79769..79771,79847..79849,80078..80080,
80084..80089,80147..80149,80153..80158)
/locus_tag="BbuZS7_0084"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99746"
misc_feature 80156..80158
/locus_tag="BbuZS7_0084"
/note="catalytic residue [active]"
/db_xref="CDD:99746"
gene 80931..81356
/locus_tag="BbuZS7_0085"
/db_xref="GeneID:7106783"
CDS 80931..81356
/locus_tag="BbuZS7_0085"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374614.1"
/db_xref="GI:218249224"
/db_xref="GeneID:7106783"
/translation="MLTEKTKKELIRLSKVNNYIIKVETNQNFKHQSKCGDQILFQII
ETNNGKFNLKHHASGCIVLLASANALNKLCNNKAKSEILNLVQKVINSDFVNLDEIDV
SLKIFNVFTNTNRKDCFLLPYKSLKDSLESYKPLRRTIR"
misc_feature 80931..81353
/locus_tag="BbuZS7_0085"
/note="NifU homolog involved in Fe-S cluster formation
[Energy production and conversion]; Region: IscU; COG0822"
/db_xref="CDD:31164"
misc_feature <81033..81314
/locus_tag="BbuZS7_0085"
/note="Iron-sulfur cluster scaffold-like proteins; Region:
IscU_like; cd06664"
/db_xref="CDD:143480"
misc_feature order(81033..81038,81108..81110,81114..81116,81270..81275,
81279..81284)
/locus_tag="BbuZS7_0085"
/note="trimerization site [polypeptide binding]; other
site"
/db_xref="CDD:143480"
misc_feature order(81033..81035,81108..81110,81282..81284)
/locus_tag="BbuZS7_0085"
/note="active site"
/db_xref="CDD:143480"
gene 81353..82888
/locus_tag="BbuZS7_0086"
/db_xref="GeneID:7106765"
CDS 81353..82888
/locus_tag="BbuZS7_0086"
/note="identified by match to protein family HMM PF01078;
match to protein family HMM TIGR00368"
/codon_start=1
/transl_table=11
/product="Mg chelatase"
/protein_id="YP_002374615.1"
/db_xref="GI:218249338"
/db_xref="GeneID:7106765"
/translation="MKIYSHSSIGYEGELIEIEIDIKKGISGIDIVGLAGSEIKESRE
RVKSAIKNSNFHFPKNRILINLAPAGIKKLGTAFDLSIAISIIKIQESKDDKNLEILI
LGELQLDGKIRSIKAVLPAIALAKEKEIKFAIVPFENLEEASLIDGLNIWGVKDLKET
IKIIEQLNSNILPPRTNTKPQSIIEKDYIIDYDFKNIKGQQRAKRAIEIAIAGGHNIM
LFGPPGSGKTLSIKCAQSILPPLTNKELIETNRIWSISGKLIDRKIIKQRPFRNPHHT
ASKEGIIGGGPNPLPGEVSLAHNGILFLDEALEFKKSILQSLREPIEDKSISISRASS
KLFKYPANFQLMLAMNLCPCGNLGKKNTDCFCSQQEISNYWKKLGAAMLDRIDIRVPT
RAINNEKLLSETSESSSEIKQRIIKARNIQNIRYENFANINKNSDLNSDHIEKFCELS
AILKNDLIYILNKLNISSRATHSILKIARTISDLKEEKNISREALLEAIEHRKNGENM
LEK"
misc_feature 81446..82858
/locus_tag="BbuZS7_0086"
/note="Mg chelatase-related protein; Region: TIGR00368"
/db_xref="CDD:129465"
misc_feature 81446..81769
/locus_tag="BbuZS7_0086"
/note="Subunit ChlI of Mg-chelatase; Region: ChlI;
pfam13541"
/db_xref="CDD:205719"
misc_feature 81929..82552
/locus_tag="BbuZS7_0086"
/note="Magnesium chelatase, subunit ChlI; Region:
Mg_chelatase; pfam01078"
/db_xref="CDD:144608"
misc_feature 82013..82036
/locus_tag="BbuZS7_0086"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(82016..82039,82265..82267)
/locus_tag="BbuZS7_0086"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 82253..82270
/locus_tag="BbuZS7_0086"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 82583..82858
/locus_tag="BbuZS7_0086"
/note="Magnesium chelatase, subunit ChlI; Region:
Mg_chelatase_2; pfam13335"
/db_xref="CDD:205515"
gene complement(82918..83868)
/locus_tag="BbuZS7_0087"
/db_xref="GeneID:7106634"
CDS complement(82918..83868)
/locus_tag="BbuZS7_0087"
/EC_number="1.1.1.27"
/note="identified by match to protein family HMM PF00056;
match to protein family HMM PF02866; match to protein
family HMM TIGR01771"
/codon_start=1
/transl_table=11
/product="L-lactate dehydrogenase"
/protein_id="YP_002374616.1"
/db_xref="GI:218249320"
/db_xref="GeneID:7106634"
/translation="MLKSNKVVLIGAGGVGSSFAYALTIDNSLVHELVIIDVNENKAK
GEVMDLNHGQMFLKKNINVLFGTYKDCANADIVVITAGLNQKPGETRLDLVDKNSKIF
KDIITNVVSSGFDGIFVVASNPVDIMTYVTMKYSKFPIHKVIGTGTILDTSRLRYFLS
DHFNVNTQNIHSYIMGEHGDSSFATWDETKIAMKPLSEYLAEGKITELELDEIHKKVV
NAAYEVIKLKGATYYAIGLGIKNIVNAIIGDQNVILPISSYINGQYGGLIKDIYIGAP
AIVCKEGVKEVLNFKISPKELDKFNSSANQLKSYIDKMEF"
misc_feature complement(82930..83856)
/locus_tag="BbuZS7_0087"
/note="L-2-hydroxyisocapronate dehydrogenases and some
bacterial L-lactate dehydrogenases; Region: HicDH_like;
cd05291"
/db_xref="CDD:133427"
misc_feature complement(order(82999..83004,83026..83028,83110..83112,
83116..83130,83287..83292,83305..83307,83362..83364,
83371..83373,83377..83379,83689..83691,83776..83778,
83854..83856))
/locus_tag="BbuZS7_0087"
/note="tetramer (dimer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:133427"
misc_feature complement(82942..83844)
/locus_tag="BbuZS7_0087"
/note="L-lactate dehydrogenase; Region: L-LDH-NAD;
TIGR01771"
/db_xref="CDD:162525"
misc_feature complement(order(83335..83337,83431..83433,83500..83508,
83620..83631,83755..83760,83824..83832))
/locus_tag="BbuZS7_0087"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:133427"
misc_feature complement(order(83146..83148,83158..83160,83167..83175,
83185..83190,83365..83367,83401..83403,83407..83412,
83701..83706,83713..83727,83731..83733,83788..83793,
83806..83808,83815..83820))
/locus_tag="BbuZS7_0087"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133427"
misc_feature complement(order(83176..83178,83206..83208,83335..83337,
83407..83409,83500..83502,83596..83598))
/locus_tag="BbuZS7_0087"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133427"
gene complement(83989..85668)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/db_xref="GeneID:7106614"
CDS complement(83989..85668)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="binds to the ribosome on the universally-conserved
alpha-sarcin loop"
/codon_start=1
/transl_table=11
/product="GTP-binding protein LepA"
/protein_id="YP_002374617.1"
/db_xref="GI:218249259"
/db_xref="GeneID:7106614"
/translation="MLDSMDIERERGITIKSQAVTITYKSNDGDFYELNFVDTPGHVD
FSYEVSRAISSCEGALLLIDASQGIQAQTVSNFYMAFEHDLEIIPVINKIDLPNANVD
FVKKQIKNDLGLNEEIAISISAKNGIGIDDLLEAICKYVPSPRGSIKDPLRALIFDSH
YDSYRGVVVHFRIFEGQIKMGDKIRLMHTNSEHLIEEIGIFKISLERKDTLEAGDVGY
FIAGIKNISDVKIGDTVTLCDFPALSPLEGFKEVKPVVFSSVYPVDANQYDDLLKAMD
RLKLNDASLTFEKDSSSALGHGFKCGFLGLLHLEVIQERIEREFNLNVILTSPSVRYK
IIPKKGESYFIETPEQFPGNEAIESVLEPYIKANIIVPTEFLGNIMSVCLLKRGVQTN
LIYLDTKRVELIYKMPLSEILFDFYDKIKSVSRGYASFDYELLDYEYTDLVRLDILVN
GDRVDALSQLVFKDSARTKAIGICKKLKDEIARQQFRIAIQGAIGSNVIARETISPVR
KDVTAKCYGGDITRKRKLLEKQKEGKKRMKMVGNVEIPQSAFLAVLKSNDN"
misc_feature complement(83992..85668)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="GTP-binding protein LepA; Provisional; Region:
PRK05433"
/db_xref="CDD:180078"
misc_feature complement(85237..85668)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="LepA also known as Elongation Factor 4 (EF4);
Region: LepA; cd01890"
/db_xref="CDD:206677"
misc_feature complement(85615..85650)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="Switch I region; other site"
/db_xref="CDD:206677"
misc_feature complement(85627..85629)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="G2 box; other site"
/db_xref="CDD:206677"
misc_feature complement(order(85348..85350,85360..85362,85468..85473,
85540..85545,85612..85617))
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206677"
misc_feature complement(85546..85557)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="G3 box; other site"
/db_xref="CDD:206677"
misc_feature complement(85495..85551)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="Switch II region; other site"
/db_xref="CDD:206677"
misc_feature complement(order(85294..85302,85384..85386,85390..85395))
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206677"
misc_feature complement(85384..85395)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="G4 box; other site"
/db_xref="CDD:206677"
misc_feature complement(85294..85302)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="G5 box; other site"
/db_xref="CDD:206677"
misc_feature complement(84958..85215)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="lepA_II: This subfamily represents the domain II of
LepA, a GTP-binding protein localized in the cytoplasmic
membrane. The N-terminal domain of LepA shares regions of
homology to translation factors. In terms of interaction
with the ribosome, EF-G, EF-Tu...; Region: lepA_II;
cd03699"
/db_xref="CDD:58090"
misc_feature complement(84346..84585)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="lepA_C: This family represents the C-terminal
region of LepA, a GTP-binding protein localized in the
cytoplasmic membrane. LepA is ubiquitous in Bacteria and
Eukaryota (e.g. Saccharomyces cerevisiae GUF1p), but is
missing from Archaea. LepA exhibits...; Region: lepA_C;
cd03709"
/db_xref="CDD:58062"
misc_feature complement(84004..84324)
/gene="lepA"
/locus_tag="BbuZS7_0088"
/note="GTP-binding protein LepA C-terminus; Region:
LepA_C; pfam06421"
/db_xref="CDD:203441"
gene complement(85828..86802)
/locus_tag="BbuZS7_0089"
/db_xref="GeneID:7106468"
CDS complement(85828..86802)
/locus_tag="BbuZS7_0089"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374618.1"
/db_xref="GI:218249559"
/db_xref="GeneID:7106468"
/translation="MRSAVLFFFALPFSISLYSSSNKNFPYWILLEKGRQFLYSKSEF
SKSNLTHAINYLQEALLRKGVYPEASYYLSVAYGMSGNAILEKLNLYKSFEDRYYLLD
ESFEKKILFSLAKMAELENNYVDTIDYLNDILNKFSTKKDYYSYHDYSQGENSMSNNE
LNASFYLTSYLKQVRGAFGIDFTFNLYRFKNYNVIDTHQLLSKVYLHLKAYELSITHG
LIAAVGILTRMYDYVCYYEPVYQFKNLRSFVQKINKYKAIKNAFESTDFWEIVYNVAA
ATYAYSNGNYKFRAIDTWKLVVDLAPRFSPYIAKSRSQIKNSVYLKKN"
gene complement(86874..87308)
/locus_tag="BbuZS7_0090"
/db_xref="GeneID:7106809"
CDS complement(86874..87308)
/locus_tag="BbuZS7_0090"
/note="produces ATP from ADP in the presence of a proton
gradient across the membrane; the K subunit is a
nonenzymatic component which binds the dimeric form by
interacting with the G and E subunits"
/codon_start=1
/transl_table=11
/product="V-type ATP synthase subunit K"
/protein_id="YP_002374619.1"
/db_xref="GI:218249717"
/db_xref="GeneID:7106809"
/translation="MDIGLIGVNSALTISAIGSALGMGAAGSAAIGAWKRCYMQGKPA
PFLLIVFVSAPLTQIIYGYILMNTLYEVMMQTNPWLLLGAGIGGGFAIAVSGFAQGKA
AAGACDAFSETGKGFATYLLVLGLIESVALFVMVFLMIFKFV"
misc_feature complement(86880..87308)
/locus_tag="BbuZS7_0090"
/note="V-type ATP synthase subunit K; Validated; Region:
PRK06649"
/db_xref="CDD:180645"
gene complement(87325..89151)
/locus_tag="BbuZS7_0091"
/note="V-type ATP synthase subunit I (V-type ATPase
subunit I); this gene contains a frame shift which may be
the result of sequencing error; identified by match to
protein family HMM PF01496"
/pseudo
/db_xref="GeneID:7106890"
gene complement(89148..89756)
/locus_tag="BbuZS7_0092"
/db_xref="GeneID:7106355"
CDS complement(89148..89756)
/locus_tag="BbuZS7_0092"
/EC_number="3.6.3.14"
/note="produces ATP from ADP in the presence of a proton
gradient across the membrane; the D subunit is part of the
catalytic core of the ATP synthase complex"
/codon_start=1
/transl_table=11
/product="V-type ATP synthase subunit D"
/protein_id="YP_002374620.1"
/db_xref="GI:218249858"
/db_xref="GeneID:7106355"
/translation="MSKIKLTKNDLKKQKDELKMFKRYLPTLQLKKQQLYMEIVKIEN
SYKIKNLEQQKLKENISNWISLFSEKFPFESWIQVKTVVKKSLNIAGVAIPIFDSIEY
EDIRHDLLFTPYWVDKGIEILKVVIQIDVELKILKKQIDLLLREFRITSQRVNLFEKV
MIPTAKANIKKINIYLGDQQTAAVVRGKIAKSSLIKKNRNSL"
misc_feature complement(89160..89756)
/locus_tag="BbuZS7_0092"
/note="V-type ATP synthase subunit D; Provisional; Region:
PRK02195"
/db_xref="CDD:179382"
gene complement(89759..91063)
/locus_tag="BbuZS7_0093"
/db_xref="GeneID:7106318"
CDS complement(89759..91063)
/locus_tag="BbuZS7_0093"
/EC_number="3.6.3.14"
/note="produces ATP from ADP in the presence of a proton
gradient across the membrane; the B subunit is part of the
catalytic core of the ATP synthase complex"
/codon_start=1
/transl_table=11
/product="V-type ATP synthase subunit B"
/protein_id="YP_002374621.1"
/db_xref="GI:218249672"
/db_xref="GeneID:7106318"
/translation="MKRVYSKIESIAGNVITVTAQGIKYGELAIVKAKDTSSLAEVIK
LDREKVSLQVYGGTRGVSTSDEIKFLGHSMQVSFSDNLLGRIFDGSGNPRDGGPSLDD
NLIEIGGPSANPTKRIVPRNMIRTGLPMIDVFNTLVESQKLPIFSVSGEPYNELLIRI
ALQAEVDLIILGGMGLKHDDYLTFKDSLEKGGALSRAIFFVHTANDSVVESLTVPDIS
LSVAEKFALKGKKVLVLLTDMTNFADAMKEISITMEQVPSNRGYPGDLYSQLAYRYEK
AIDFEGAGSITILAVTTMPGDDVTHPVPDNTGYITEGQYYLKGGRIEPFGSLSRLKQM
VNSRTRDDHRTIMDSMIKLYASSKESVEKKAMGFNMTKWDEKLLKYSNMFESKMMDLS
VNIPLEEALDLGWSILASCFSPKETGIKTDLIEKYWPKKETY"
misc_feature complement(89762..91063)
/locus_tag="BbuZS7_0093"
/note="V-type ATP synthase subunit B; Provisional; Region:
PRK02118"
/db_xref="CDD:179373"
misc_feature complement(90851..91042)
/locus_tag="BbuZS7_0093"
/note="ATP synthase alpha/beta family, beta-barrel domain;
Region: ATP-synt_ab_N; pfam02874"
/db_xref="CDD:145823"
misc_feature complement(90071..90847)
/locus_tag="BbuZS7_0093"
/note="V/A-type ATP synthase (non-catalytic) subunit B.
These ATPases couple ATP hydrolysis to the build up of a
H+ gradient, but V-type ATPases do not catalyze the
reverse reaction. The Vacuolar (V-type) ATPase is found in
the membranes of vacuoles, the golgi...; Region:
V_A-ATPase_B; cd01135"
/db_xref="CDD:30001"
misc_feature complement(90602..90625)
/locus_tag="BbuZS7_0093"
/note="Walker A motif homologous position; other site"
/db_xref="CDD:30001"
misc_feature complement(90350..90361)
/locus_tag="BbuZS7_0093"
/note="Walker B motif; other site"
/db_xref="CDD:30001"
gene complement(91085..92812)
/locus_tag="BbuZS7_0094"
/db_xref="GeneID:7106132"
CDS complement(91085..92812)
/locus_tag="BbuZS7_0094"
/EC_number="3.6.3.14"
/note="produces ATP from ADP in the presence of a proton
gradient across the membrane; the A subunit is part of the
catalytic core of the ATP synthase complex"
/codon_start=1
/transl_table=11
/product="V-type ATP synthase subunit A"
/protein_id="YP_002374622.1"
/db_xref="GI:218249376"
/db_xref="GeneID:7106132"
/translation="MNTKGKVVGVNGNLVTIEVEGSVFMNEVLFVKTAGRNLKAEVIR
IRGNEVDAQVFELTKGISVGDLVEFTDKLLTVELGPGLLTQVYDGLQNPLPELAIQCG
FFLERGVYLRPLNKDKKWNFKKTSKVGDIVIAGDFLGFVIEGTVHHQIMIPFYKRDSY
KIVEIVSDGDYSIDEQIAVIEDDSGMRHNITMSFHWPVKVPITNYKERLIPSEPMLTQ
TRIIDTFFPVAKGGTFCIPGPFGAGKTVLQQVTSRNADVDVVIIAACGERAGEVVETL
KEFPELMDPKTGKSLMDRTCIICNTSSMPVAAREASVYTAITIGEYYRQMGLDILLLA
DSTSRWAQAMREMSGRLEEIPGEEAFPAYLESVIASFYERAGIVVLNNGDIGSVTVGG
SVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAISPLESWSKYKGVIDQKKT
EYARSFLVKGNEINQMMKVVGEEGISNDDFLIYLKSELLDSCYLQQNSFDSIDAAVSS
ERQNYMFDIVYNILKTNFEFSDKLQARDFINELRQNLLDMNLSSFKDHKFNKLEHALG
ELINFKKVI"
misc_feature complement(91106..92812)
/locus_tag="BbuZS7_0094"
/note="V-type ATP synthase subunit A; Provisional; Region:
PRK04192"
/db_xref="CDD:179776"
misc_feature complement(92603..>92710)
/locus_tag="BbuZS7_0094"
/note="ATP synthase alpha/beta family, beta-barrel domain;
Region: ATP-synt_ab_N; pfam02874"
/db_xref="CDD:145823"
misc_feature complement(91490..92596)
/locus_tag="BbuZS7_0094"
/note="V/A-type ATP synthase catalytic subunit A. These
ATPases couple ATP hydrolysis to the build up of a H+
gradient, but V-type ATPases do not catalyze the reverse
reaction. The Vacuolar (V-type) ATPase is found in the
membranes of vacuoles, the golgi...; Region: V_A-ATPase_A;
cd01134"
/db_xref="CDD:30000"
misc_feature complement(92078..92101)
/locus_tag="BbuZS7_0094"
/note="Walker A motif/ATP binding site; other site"
/db_xref="CDD:30000"
misc_feature complement(91808..91822)
/locus_tag="BbuZS7_0094"
/note="Walker B motif; other site"
/db_xref="CDD:30000"
gene complement(92826..93371)
/locus_tag="BbuZS7_0095"
/db_xref="GeneID:7106673"
CDS complement(92826..93371)
/locus_tag="BbuZS7_0095"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374623.1"
/db_xref="GI:218249223"
/db_xref="GeneID:7106673"
/translation="MLDSYYYVLSSLPYIDLKSLKNYSVSDFLNNVEISLSKKDFNFL
KELLEFKIDRGKSRVIDLFLNFEDTIRYTLAALRAEKLGLSKDFYLESTYFSSYYLSI
LKNICLKENPFEIELSFDLLKWQFLTDLEVGHEFDFEKLIIYFLKLRLFLRHNLFKEK
LGIQNFDNICKNLIDKTNEKV"
gene complement(93381..93980)
/locus_tag="BbuZS7_0096"
/db_xref="GeneID:7106764"
CDS complement(93381..93980)
/locus_tag="BbuZS7_0096"
/EC_number="3.6.3.14"
/note="produces ATP from ADP in the presence of a proton
gradient across the membrane; the E subunit is part of the
catalytic core of the ATP synthase complex"
/codon_start=1
/transl_table=11
/product="V-type ATP synthase subunit E"
/protein_id="YP_002374624.1"
/db_xref="GI:218249519"
/db_xref="GeneID:7106764"
/translation="MQFEVKDLINKIKKDGLEEAERASNDIILKAKREAEEIVARAEE
AARVLKAKSEKEANDYKCHSLEASRQAIRDLIIGVEKNLKSLFENALKDNVTEVLSDN
NFLAELIIKITDSWAKGEKLVIQLNESDFSSLEQILRLKLGNKLKEGMELRPFRGISK
GFKIQKKNIGLHYDFSAETIADILFDYLNPRFKEVIKVV"
misc_feature complement(93384..93980)
/locus_tag="BbuZS7_0096"
/note="V-type ATP synthase subunit E; Provisional; Region:
PRK01558"
/db_xref="CDD:179302"
gene complement(94167..94553)
/locus_tag="BbuZS7_0097"
/db_xref="GeneID:7106596"
CDS complement(94167..94553)
/locus_tag="BbuZS7_0097"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374625.1"
/db_xref="GI:218249365"
/db_xref="GeneID:7106596"
/translation="MNISKFNEFENVLFHICLDVDFVLENEFGNSYDIHPNRPFRGKA
ANGLLDGLFSVTTTFTSGYGSRFGRGYLIIIEILTLNFVDDEFWDKINKRGIEIFREG
LKNKFPSKNLDIVLDGNVYKIIGPFF"
gene complement(94559..96901)
/locus_tag="BbuZS7_0098"
/db_xref="GeneID:7106662"
CDS complement(94559..96901)
/locus_tag="BbuZS7_0098"
/note="identified by match to protein family HMM PF00488;
match to protein family HMM PF01713; match to protein
family HMM TIGR01069"
/codon_start=1
/transl_table=11
/product="MutS2 protein"
/protein_id="YP_002374626.1"
/db_xref="GI:218249507"
/db_xref="GeneID:7106662"
/translation="MQDEQDKYLKNIDFYEILSLVSKYVSNPDTVNLLSNQKILKTKE
SLEKIFSFVSLIRMLFESCKGYPNSFINSLKYPISLLLKENSRVSIENLRDIIVFLDE
VLRINLFLHKNSDIKHLNVQILSDLLFLNPELKNLLNELKEHIDVDALELKSGVVKEY
DSIEFEIKNLNRRVENQIKKIISLNAEYLTSNFVCYKSNKYTLALKSNFKGKIKGNII
SISSSGETFYIEPNDIVNANNRLNYLSLEKERIILKILRNLSAKVHSNIVLLDNLYNN
FLYYDSLKARAIYGIKTKGVFPEISNVLNIFDAHHPLLKDSKAITFTPAENRVIIITG
PNAGGKTVTLKTIGLLSAMFQFGIPIVVGESSTFKIFDNIFIDIGDEQSISNSLSTFS
SHMSNISYILKHTTKDSLVIFDEFCSGTDIDQGQALAISILEYLININSYVLISTHYN
ALKYFAYTHEGVVNASMRMDLETMQPNYNLIFSIPGESYAFNVASKALIDRSIVIRAN
EIYSSQKTEINEILEKLIEKEKDLLLIKESMDKKLIQIELQEKELENFYQDLLLREKN
IETKLLNEQNEFLKNSRKVLENLVREIKEGNINVAKNKAFISDLEKNVDLKTNKVNSL
NNKRNVVADFKIGDKVRIVNSNAKGKIVGISKKKITVNVGAFNVSVSSSEISLENFKE
KKENGKNFNFSIDYNKENLLSFTIDIRGMRSVDALDFLNKKIDNIILNGINKFEIIHG
KGEGHLMREVHNLLKELKFIRKYYFAHPSDGGSGKTIVEI"
misc_feature complement(94562..96889)
/locus_tag="BbuZS7_0098"
/note="MutS2 family protein; Region: mutS2; TIGR01069"
/db_xref="CDD:130141"
misc_feature complement(95405..95989)
/locus_tag="BbuZS7_0098"
/note="MutS2 homologs in bacteria and eukaryotes. The
MutS protein initiates DNA mismatch repair by recognizing
mispaired and unpaired bases embedded in duplex DNA and
activating endo- and exonucleases to remove the mismatch.
Members of the MutS family also...; Region: ABC_MutS2;
cd03280"
/db_xref="CDD:73039"
misc_feature complement(95879..95902)
/locus_tag="BbuZS7_0098"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73039"
misc_feature complement(order(95558..95560,95657..95662,95765..95767,
95876..95884,95888..95893))
/locus_tag="BbuZS7_0098"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73039"
misc_feature complement(95765..95776)
/locus_tag="BbuZS7_0098"
/note="Q-loop/lid; other site"
/db_xref="CDD:73039"
misc_feature complement(95711..95752)
/locus_tag="BbuZS7_0098"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73039"
misc_feature complement(95657..95674)
/locus_tag="BbuZS7_0098"
/note="Walker B; other site"
/db_xref="CDD:73039"
misc_feature complement(95639..95650)
/locus_tag="BbuZS7_0098"
/note="D-loop; other site"
/db_xref="CDD:73039"
misc_feature complement(95552..95572)
/locus_tag="BbuZS7_0098"
/note="H-loop/switch region; other site"
/db_xref="CDD:73039"
misc_feature complement(94562..94786)
/locus_tag="BbuZS7_0098"
/note="Smr domain; Region: Smr; pfam01713"
/db_xref="CDD:201932"
gene complement(96891..97814)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/db_xref="GeneID:7106584"
CDS complement(96891..97814)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="identified by match to protein family HMM PF03193;
match to protein family HMM TIGR00157"
/codon_start=1
/transl_table=11
/product="ribosome small subunit-dependent GTPase A"
/protein_id="YP_002374627.1"
/db_xref="GI:218249950"
/db_xref="GeneID:7106584"
/translation="MNYLEFEVIWGVNNIYSILELNSKLIYEGIFKGKVLETGCKEYS
PLVPGDIVLGYIYSSRKVYIDKRLSRKNILWRYNKKADLRQTIVSNIDNVLIVSSANF
PEMKNFFIDRVLIVAEEQNIVPIIVINKIDKGISQKAQEFSEIYENLGYKVLKTSVKT
YEGIKEVKEVLKNSRTSFIGQSGVGKSSLINLIDSRASQSVNEISHKYSRGKHTTVYS
ISFHSDSGIIVDTPGIKEFGIETLPFENLKYYFKEFENFASFCKYKSCLHVSEPYCSV
TSSLDNGISKLRYESYLKILSELKNYKNYAR"
misc_feature complement(96927..97679)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="ribosome small subunit-dependent GTPase A; Region:
TIGR00157"
/db_xref="CDD:199998"
misc_feature complement(96927..97550)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="Ribosomal interacting GTPase YjeQ/EngC, a
circularly permuted subfamily of the Ras GTPases; Region:
YjeQ_EngC; cd01854"
/db_xref="CDD:206747"
misc_feature complement(order(96930..96932,96942..96944,96951..96953,
97059..97061,97065..97067,97077..97079,97362..97364,
97458..97463,97470..97475,97479..97484,97491..97496))
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="GTPase/Zn-binding domain interface [polypeptide
binding]; other site"
/db_xref="CDD:206747"
misc_feature complement(order(97251..97268,97341..97346,97416..97421,
97425..97430))
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206747"
misc_feature complement(97419..97430)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="G4 box; other site"
/db_xref="CDD:206747"
misc_feature complement(97338..97346)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="G5 box; other site"
/db_xref="CDD:206747"
misc_feature complement(97254..97277)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="G1 box; other site"
/db_xref="CDD:206747"
misc_feature complement(97158..97181)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="Switch I region; other site"
/db_xref="CDD:206747"
misc_feature complement(97170..97172)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="G2 box; other site"
/db_xref="CDD:206747"
misc_feature complement(97116..97127)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="G3 box; other site"
/db_xref="CDD:206747"
misc_feature complement(97113..97121)
/gene="rsgA"
/locus_tag="BbuZS7_0099"
/note="Switch II region; other site"
/db_xref="CDD:206747"
gene complement(97811..98728)
/gene="murI"
/locus_tag="BbuZS7_0100"
/db_xref="GeneID:7106256"
CDS complement(97811..98728)
/gene="murI"
/locus_tag="BbuZS7_0100"
/EC_number="5.1.1.3"
/note="identified by match to protein family HMM PF01177;
match to protein family HMM TIGR00067"
/codon_start=1
/transl_table=11
/product="glutamate racemase"
/protein_id="YP_002374628.1"
/db_xref="GI:218249889"
/db_xref="GeneID:7106256"
/translation="MLNQFYYSLKLFLKKHLTIFIILILDINFVNIYTLLFRGDYYFV
MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLF
LIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVLKRVLLIAT
NTTLESKFVKDQVNIHNDLIVKAAGELVNFVEYGENYKKYALRCLEALKFEVVNTGRE
IVFLGCTHYLHLKVMIEDFLKIPVYENRELVVKNLIRSMNFSEHKGNYYKNDFDFVDD
EFYLTENKNLTFYQNFCKKYNLRFKGMIV"
misc_feature complement(97832..98575)
/gene="murI"
/locus_tag="BbuZS7_0100"
/note="Asp/Glu/Hydantoin racemase; Region: Asp_Glu_race;
cl00518"
/db_xref="CDD:212232"
gene 98764..100152
/gene="asnC"
/locus_tag="BbuZS7_0101"
/db_xref="GeneID:7106348"
CDS 98764..100152
/gene="asnC"
/locus_tag="BbuZS7_0101"
/EC_number="6.1.1.22"
/note="catalyzes a two-step reaction, first charging an
asparagine molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="asparaginyl-tRNA synthetase"
/protein_id="YP_002374629.1"
/db_xref="GI:218249572"
/db_xref="GeneID:7106348"
/translation="MFASIKDILKNPILNSNVTINGWIRTKRSNGKIGFIEINDGSTL
KGIQAVINEEENQFSEKDLKKLTTGTSISLTGLLVESPAKGQNYEIKTHSFNVIGETD
PETYPLQKKRHSFEFLREIPHLRIRTNTFGAIARIRNKISYKIHEYFQKNGFFYINTP
IITSNDGEGAGEMFRVSTLKFNKLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA
LSKIYTFGPTFRAENSNTTRHASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNE
CSQDMDFLENYIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQ
TDHERYLTEETFKKPVVVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSER
EDDLQKLENRIKELNLNIEHLNWYLDLRRFGSAPHSGFGLGLERLVQYSTGISNIRDS
IPFPRTPKNLYF"
misc_feature 98764..100149
/gene="asnC"
/locus_tag="BbuZS7_0101"
/note="asparaginyl-tRNA synthetase; Validated; Region:
asnC; PRK03932"
/db_xref="CDD:179678"
misc_feature 98812..99063
/gene="asnC"
/locus_tag="BbuZS7_0101"
/note="EcAsnRS_like_N: N-terminal, anticodon recognition
domain of the type found in Escherichia coli
asparaginyl-tRNA synthetase (AsnRS) and, in Arabidopsis
thaliana and Saccharomyces cerevisiae mitochondrial (mt)
AsnRS. This domain is a beta-barrel domain (OB...; Region:
EcAsnRS_like_N; cd04318"
/db_xref="CDD:58588"
misc_feature order(98830..98832,98884..98886,98974..98976,99058..99060)
/gene="asnC"
/locus_tag="BbuZS7_0101"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:58588"
misc_feature order(98839..98841,98845..98850,98866..98868,98905..98907,
98911..98913,98962..98964,99004..99006,99028..99030)
/gene="asnC"
/locus_tag="BbuZS7_0101"
/note="putative anticodon binding site; other site"
/db_xref="CDD:58588"
misc_feature 99097..100137
/gene="asnC"
/locus_tag="BbuZS7_0101"
/note="Asx tRNA synthetase (AspRS/AsnRS) class II core
domain. Assignment to class II aminoacyl-tRNA synthetases
(aaRS) based upon its structure and the presence of three
characteristic sequence motifs in the core domain. This
family includes AsnRS as well as...; Region: AsxRS_core;
cd00776"
/db_xref="CDD:29821"
misc_feature order(99124..99126,99130..99132,99142..99144,99157..99159,
99175..99180,99187..99189,99199..99201,99220..99222,
99229..99231,99235..99237,99241..99249,99253..99255,
99286..99291,99352..99360,99394..99396,99403..99405,
99412..99423,99484..99489,99514..99519,99532..99534,
100015..100017,100024..100035,100126..100134)
/gene="asnC"
/locus_tag="BbuZS7_0101"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:29821"
misc_feature 99241..99255
/gene="asnC"
/locus_tag="BbuZS7_0101"
/note="motif 1; other site"
/db_xref="CDD:29821"
misc_feature 99448..99459
/gene="asnC"
/locus_tag="BbuZS7_0101"
/note="motif 2; other site"
/db_xref="CDD:29821"
misc_feature order(99451..99453,99457..99459,99475..99480,99916..99918,
99925..99927,100060..100062,100069..100071)
/gene="asnC"
/locus_tag="BbuZS7_0101"
/note="active site"
/db_xref="CDD:29821"
misc_feature 100060..100071
/gene="asnC"
/locus_tag="BbuZS7_0101"
/note="motif 3; other site"
/db_xref="CDD:29821"
gene 100175..100696
/locus_tag="BbuZS7_0102"
/db_xref="GeneID:7106822"
CDS 100175..100696
/locus_tag="BbuZS7_0102"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374630.1"
/db_xref="GI:218249849"
/db_xref="GeneID:7106822"
/translation="MKLPKLYKLILLFLFTTRLFSVKDEKSDNKLELFSNVETKIKKN
SKNYDSNSNSKKIKKESILKRGTNSKKNINSNIYIQKSKKINYPNRNLGNNINQKTAN
DVNFTKTSYVKVYPNYKDDNFQEIKNANKFPVKTEKTHMLIGPILKDNLGIIIKMLKT
KGYTLIEYVEDNN"
gene complement(100693..101286)
/locus_tag="BbuZS7_0103"
/db_xref="GeneID:7106229"
CDS complement(100693..101286)
/locus_tag="BbuZS7_0103"
/codon_start=1
/transl_table=11
/product="phosphoribosyl transferase"
/protein_id="YP_002374631.1"
/db_xref="GI:218249380"
/db_xref="GeneID:7106229"
/translation="MKKYVSYEEIRINGFKLAYKIYKDGFIPDIMYVSLRGGAYLGNI
ISEFFKFVKVDKPLLYAAVVARSYDIFNEQKKIMIDGWTYDPKYLRAGDKVLFVDDIF
DTGRTIVYLRNEVLKKGIESENVKIAVYDYKDHGFVDYIPDYYVNKYSNQEELNTWIH
YGNHELTGLNESEYKNSFKYIDDELNEILKFLAKNKS"
misc_feature complement(100843..101241)
/locus_tag="BbuZS7_0103"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature complement(order(100966..100980,100984..100992,
101176..101178,101182..101184))
/locus_tag="BbuZS7_0103"
/note="active site"
/db_xref="CDD:206754"
gene complement(101472..102896)
/locus_tag="BbuZS7_0104"
/db_xref="GeneID:7106677"
CDS complement(101472..102896)
/locus_tag="BbuZS7_0104"
/note="identified by match to protein family HMM PF00089;
match to protein family HMM PF00595; match to protein
family HMM TIGR02037"
/codon_start=1
/transl_table=11
/product="periplasmic serine protease DO"
/protein_id="YP_002374632.1"
/db_xref="GI:218249548"
/db_xref="GeneID:7106677"
/translation="MEKKFFSGFLLSFLALSIGFFIGMHYLASNRSNIVFAEEKDNTV
RALQDSFREVSKKILPSSVEVHATGVIKQSFPIPFFFFDMPEFDSERKSNWAGSGVII
GRDSQKKSLFYVVTNSHVVDKATELEVVSYDKKKHKAKLIGKDEKKDIALISFESDDA
TIKVADLGDSDKLEIGDWVMAVGSPFQFSFTVTAGIVSGLQRSANPNLQSRNLFIQTD
AAINRGNSGGPLVNIKGEVIGINAWIASNSGGNIGLGFAIPVNNIKSTVDFFLKGKKI
ESAWLGISFYPLKTRDSEVLKSLGVESNDVSAAIIASLYPGSPAVKSGLRAGDIIMKV
NGVSMSVFQDVTSYISDFYAGEKVNVEILRGNVKKNIEIVLAVRPKDKELSSSKMLPG
FVVYPLVEDIKAQLNLRNWIKGVVVDYIDKNLASNIRMKSGDVILSVNSKSVSNLREF
YDALEVGKNTYKILRGNDSFKITF"
misc_feature complement(101475..102752)
/locus_tag="BbuZS7_0104"
/note="periplasmic serine protease, Do/DeqQ family;
Region: degP_htrA_DO; TIGR02037"
/db_xref="CDD:162670"
misc_feature complement(102177..102608)
/locus_tag="BbuZS7_0104"
/note="Trypsin-like peptidase domain; Region: Trypsin_2;
pfam13365"
/db_xref="CDD:205544"
misc_feature complement(101778..102062)
/locus_tag="BbuZS7_0104"
/note="PDZ domain of tryspin-like serine proteases, such
as DegP/HtrA, which are oligomeric proteins involved in
heat-shock response, chaperone function, and apoptosis.
May be responsible for substrate recognition and/or
binding, as most PDZ domains bind...; Region:
PDZ_serine_protease; cd00987"
/db_xref="CDD:29044"
misc_feature complement(order(101859..101864,101871..101876,
102042..102044,102048..102059))
/locus_tag="BbuZS7_0104"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29044"
misc_feature complement(101475..101723)
/locus_tag="BbuZS7_0104"
/note="PDZ domain of tryspin-like serine proteases, such
as DegP/HtrA, which are oligomeric proteins involved in
heat-shock response, chaperone function, and apoptosis.
May be responsible for substrate recognition and/or
binding, as most PDZ domains bind...; Region:
PDZ_serine_protease; cd00987"
/db_xref="CDD:29044"
misc_feature complement(order(101544..101549,101556..101561,
101712..101714,101718..101723))
/locus_tag="BbuZS7_0104"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29044"
gene complement(102963..103718)
/gene="map"
/locus_tag="BbuZS7_0105"
/db_xref="GeneID:7106798"
CDS complement(102963..103718)
/gene="map"
/locus_tag="BbuZS7_0105"
/EC_number="3.4.11.18"
/note="identified by match to protein family HMM PF00557;
match to protein family HMM TIGR00500"
/codon_start=1
/transl_table=11
/product="methionine aminopeptidase, type I"
/protein_id="YP_002374633.1"
/db_xref="GI:218249625"
/db_xref="GeneID:7106798"
/translation="MTKLRLKSKDEIKKIKASASLLALTLLEVERNIVPGISTKELDL
IAYDFIIKNRAKPAFKGYRGFKGTICASVNEEVIHGIPGKRKLADGDIVSIDCGVILD
GFYSDMAKTFKVGNVDSSIDKLLEVTNASLYKGIAEMKVGNRILNISKAIEDYIKPFG
FGIVREYTGHGVGFELHEEPSVPNYYAPFFKNIRIQEGMVLAIEPMVNLKGHKVSIKS
DGWTVFASDLSYSAHFEHTVAVVDGLPLILSEV"
misc_feature complement(102969..103637)
/gene="map"
/locus_tag="BbuZS7_0105"
/note="Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also
known as methionyl aminopeptidase and Peptidase M.
Catalyzes release of N-terminal amino acids,
preferentially methionine, from peptides and arylamides;
Region: MetAP1; cd01086"
/db_xref="CDD:29971"
misc_feature complement(order(103014..103016,103107..103109,
103209..103211,103398..103400,103431..103433,
103482..103484))
/gene="map"
/locus_tag="BbuZS7_0105"
/note="active site"
/db_xref="CDD:29971"
gene complement(103711..105246)
/locus_tag="BbuZS7_0106"
/db_xref="GeneID:7106084"
CDS complement(103711..105246)
/locus_tag="BbuZS7_0106"
/note="identified by match to protein family HMM PF00515;
match to protein family HMM PF07719"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374634.1"
/db_xref="GI:218249925"
/db_xref="GeneID:7106084"
/translation="MGIDFYIDKKKFADAKKAMLFSSYYANTEFKWLALAKRAKLWAL
NTGDYHLMGEIVNLGVKVLPGNLKLRALEVYSKLKIGLLKDAYRIANEYLLNSEEYQG
LYDEVFIKNLSSDNGILDFNKFIDKIYKEKDARIFEEIGLNLKNNAFLINAMLLYIEK
KNIDSAKRILFRIKEDKSFLKELAYISYNLNDLDYTISNLKSIKNEEDPTLLFLLADA
YFKKGDIKNAKNEYLKLYTRFPDYNVLVYLNLALIANSENDYKRAISYLNKANEVFKD
NKIINYYLANIYFGIKNYFKANEIIANYKEDPLFFKLYFALNYANSKYEAKKSYLWRL
FYKTEYNSSIAQFLAWNLLLYSDLKDLDLFFRIYNFSENKQDWYDFYKFYYYFLKRDF
ISSKKIIFDNKSQKYMFGIYYNLGVLSFSEKDYEEAERYFNKGISLLPSSFYDKDSTT
PYERELVSKIYLKQGINYLYLGKMEKGKESILASYSFYETDEGRLYKNMIDTLRERNL
NFD"
misc_feature complement(104419..104619)
/locus_tag="BbuZS7_0106"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature complement(104356..104616)
/locus_tag="BbuZS7_0106"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(104374..104379,104386..104391,
104398..104403,104479..104484,104491..104496,
104500..104505,104593..104598,104605..104610,
104614..104616))
/locus_tag="BbuZS7_0106"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(104356..104358,104392..104394,
104437..104439,104446..104448,104458..104460,
104494..104496,104542..104544,104551..104553,
104563..104565,104599..104601))
/locus_tag="BbuZS7_0106"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene complement(105365..105793)
/gene="nusB"
/locus_tag="BbuZS7_0107"
/db_xref="GeneID:7106449"
CDS complement(105365..105793)
/gene="nusB"
/locus_tag="BbuZS7_0107"
/note="Regulates rRNA biosynthesis by transcriptional
antitermination"
/codon_start=1
/transl_table=11
/product="transcription antitermination protein NusB"
/protein_id="YP_002374635.1"
/db_xref="GI:218249233"
/db_xref="GeneID:7106449"
/translation="MHEVRVLAFQKIYSIDINQSAMDDIFDIFNIEDKDLDIENESIK
SFYSSLVIGTFNNLEHIDSLIRDISLNWSLERMDKVDLAILRMGVYSLKFENFENSKR
AIIDEAILIAKKYGSKNSYKFINGILDALLKNMESCIEKK"
misc_feature complement(105389..105793)
/gene="nusB"
/locus_tag="BbuZS7_0107"
/note="Transcription termination factor NusB (N
protein-Utilization Substance B). NusB plays a key role in
the regulation of ribosomal RNA biosynthesis in eubacteria
by modulating the efficiency of transcriptional
antitermination. NusB along with other Nus...; Region:
Terminator_NusB; cd00619"
/db_xref="CDD:29565"
misc_feature complement(order(105779..105781,105791..105793))
/gene="nusB"
/locus_tag="BbuZS7_0107"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:29565"
gene complement(105831..106841)
/locus_tag="BbuZS7_0108"
/db_xref="GeneID:7106774"
CDS complement(105831..106841)
/locus_tag="BbuZS7_0108"
/note="identified by match to protein family HMM PF00639;
match to protein family HMM PF09312"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374636.1"
/db_xref="GI:218249766"
/db_xref="GeneID:7106774"
/translation="MKSFLFWVILGTVGISSFAQNTPVAIINLYKNEIITKTGFDSKV
DIFKKTQGRDLTDAEKKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNF
TDEQIKQMIEKQGTNWGELLSSMKRSLSSQKLVLKQAQPKFSEIKTPSEKEIVEYYEA
NKTKFVNPDISRVSHIFFSTKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDES
SKAKNGDLGFLSRGDQNAQNLLGADFVKEVFNFNKGDISSPIASKEGFHIVKVTEKYA
QRFLGLNDKVSPTADLIVKDAIRNNMINVQQQQIVVQVQQDMYGKLNKSANIQILDSS
LK"
misc_feature complement(105837..106841)
/locus_tag="BbuZS7_0108"
/note="Parvulin-like peptidyl-prolyl isomerase
[Posttranslational modification, protein turnover,
chaperones]; Region: SurA; COG0760"
/db_xref="CDD:31103"
misc_feature complement(106461..106772)
/locus_tag="BbuZS7_0108"
/note="SurA N-terminal domain; Region: SurA_N_3; cl07813"
/db_xref="CDD:208773"
misc_feature complement(106023..106319)
/locus_tag="BbuZS7_0108"
/note="PPIC-type PPIASE domain; Region: Rotamase;
pfam00639"
/db_xref="CDD:201365"
gene complement(106921..108117)
/locus_tag="BbuZS7_0109"
/db_xref="GeneID:7106939"
CDS complement(106921..108117)
/locus_tag="BbuZS7_0109"
/note="identified by match to protein family HMM PF00108;
match to protein family HMM PF02803; match to protein
family HMM TIGR01930"
/codon_start=1
/transl_table=11
/product="acetyl-CoA acetyltransferase"
/protein_id="YP_002374637.1"
/db_xref="GI:218249892"
/db_xref="GeneID:7106939"
/translation="MIKKVAIIDGLRTPNFKFGGSFKGLNIIDESLKVVKALLERNKL
YKVDEVIIGNVISAGLGQNIARQIALKSDLGDTVPAFSVNKVCGSGLKALELAFNSIA
LGDNDIVLAGGVEDLTNSPYLLPRKIRFDGLKFGNFGIEDSIQKDALIDSLNFISMGL
TAENLSEKYRITREMQDEFAYNSHVKALKARELGYFEDEIYPLTVFDKKTNSSVTISS
DEEIRDNLTLNKLASLNPVFKESGTVTAGNSSSLNDGACFLILASEERVKSLGVSPLA
YIGGFKSVGLDPLYMGFGAYMAIEGIISKLSLNPSEIDLIEVNEAFAAQALSIEKALF
KKYNITSDIINVNGGAIALGHPFAVSGSRILLTLSRSMKMKNKTKGIASVCIGGGQGI
SSFLYR"
misc_feature complement(106924..108102)
/locus_tag="BbuZS7_0109"
/note="Thiolase are ubiquitous enzymes that catalyze the
reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and...; Region: thiolase;
cd00751"
/db_xref="CDD:29411"
misc_feature complement(106930..108099)
/locus_tag="BbuZS7_0109"
/note="acetyl-CoA acetyltransferases; Region:
AcCoA-C-Actrans; TIGR01930"
/db_xref="CDD:188183"
misc_feature complement(order(106951..106956,107203..107205,
107263..107265,107269..107271,107275..107277,
107764..107766,107809..107811,107818..107823,
107842..107844,107866..107877,107908..107910,
107920..107922,107929..107931,107971..107973,
108046..108048))
/locus_tag="BbuZS7_0109"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29411"
misc_feature complement(order(106963..106965,107053..107055,
107857..107859))
/locus_tag="BbuZS7_0109"
/note="active site"
/db_xref="CDD:29411"
gene 108254..109618
/locus_tag="BbuZS7_0110"
/db_xref="GeneID:7106351"
CDS 108254..109618
/locus_tag="BbuZS7_0110"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374638.1"
/db_xref="GI:218249460"
/db_xref="GeneID:7106351"
/translation="MRFKKIFLIIFIISNLKVYSYNYAIQYKNEGIDKYYFEILNDGF
GFSLSDFFDDLRSGSLIFTYVSKYNFIINLEAHMLTYRGYKDSPKSLISRTDLIEIGF
MYYFPILLLINGKNFGEIDLGIGVKNLLFGDWGGHLMQSIIHLILNQHRPIPSIKSYD
SYNYRGFLSFALNYSYMNFLNLENYMDLSYFADYFIKNSIGITLKNENIGFDIKLYSQ
IQNQIKSLKTYSKTQEAETGIGINYQFYSKNFFITNNLNIKNFSTKENFLSIGGFGII
ITPEEYKKISESNNEFNVISNNFYFGFDIMIPLKIRNSLFYKINENINHYFSISTNYY
TNYNETNSFTNQLSSGIMYEFLPQKTFNPYLISGLFFAYNQNNKDIKSISRPIRIKNI
LQVGIENELGFLFKMLKYRNTEYIFKIYSKVNYIPIAYNLDEKKLEKHSINFNYLGIG
IVVK"
gene complement(109622..110989)
/gene="dnaB"
/locus_tag="BbuZS7_0111"
/db_xref="GeneID:7106536"
CDS complement(109622..110989)
/gene="dnaB"
/locus_tag="BbuZS7_0111"
/EC_number="3.6.1.-"
/note="identified by match to protein family HMM PF00772;
match to protein family HMM PF03796; match to protein
family HMM TIGR00665"
/codon_start=1
/transl_table=11
/product="replicative DNA helicase"
/protein_id="YP_002374639.1"
/db_xref="GI:218249740"
/db_xref="GeneID:7106536"
/translation="MALAAFSNSALLFNDGAEKAVISSIFYNSDKIEQIAFHVRADDF
YNETHKLIFKAMVSLYEKRENIDPITVFEEVSKHVSKTQLLIKKDLINLPDYLDSLSV
YLPTDRTINVYAKIVKEQSVRRSILNVSKELNDYINDSTKSINEIVEESQQKILSIEL
DYSSKNLYHAKVIAERVHNEIYERSMKKKEANFGIPSGFRKVDSLIGGFRNSDFIIVG
ARPSIGKTAFALNIASYIALRKEEKKKVGFFSLEMTADALIKRIISSQSCIDSFKVQN
SILSGQEIKSLNDIINEISDSELYIEDTPNISLLTLATQARKLKRFYGIDIIFVDYIS
LISFETKNLPRHEQVASISKSLKELARELEIPIVALSQLTRDTEGREPNLASLRESGA
LEQDADIVILLHRDKDFKFESSAEIEPIETKVIVAKHRNGPTGRADILFLPHITKFVN
KDHQY"
misc_feature complement(109631..110941)
/gene="dnaB"
/locus_tag="BbuZS7_0111"
/note="replicative DNA helicase; Region: DnaB; TIGR00665"
/db_xref="CDD:211596"
misc_feature complement(110633..110941)
/gene="dnaB"
/locus_tag="BbuZS7_0111"
/note="DnaB-like helicase N terminal domain; Region: DnaB;
pfam00772"
/db_xref="CDD:201435"
misc_feature complement(109661..110392)
/gene="dnaB"
/locus_tag="BbuZS7_0111"
/note="DnaB helicase C terminal domain. The hexameric
helicase DnaB unwinds the DNA duplex at the chromosome
replication fork. Although the mechanism by which DnaB
both couples ATP hydrolysis to translocation along DNA and
denatures the duplex is unknown, a...; Region: DnaB_C;
cd00984"
/db_xref="CDD:29985"
misc_feature complement(110312..110332)
/gene="dnaB"
/locus_tag="BbuZS7_0111"
/note="Walker A motif; other site"
/db_xref="CDD:29985"
misc_feature complement(order(109667..109669,109700..109702,
109775..109777,109874..109876,109997..109999,
110312..110317))
/gene="dnaB"
/locus_tag="BbuZS7_0111"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29985"
misc_feature complement(109997..110008)
/gene="dnaB"
/locus_tag="BbuZS7_0111"
/note="Walker B motif; other site"
/db_xref="CDD:29985"
misc_feature complement(order(109727..109732,109775..109780,
109853..109879,109952..109960,109979..109984))
/gene="dnaB"
/locus_tag="BbuZS7_0111"
/note="DNA binding loops [nucleotide binding]"
/db_xref="CDD:29985"
gene complement(110993..111514)
/gene="rplI"
/locus_tag="BbuZS7_0112"
/db_xref="GeneID:7106913"
CDS complement(110993..111514)
/gene="rplI"
/locus_tag="BbuZS7_0112"
/note="in Escherichia coli this protein is wrapped around
the base of the L1 stalk"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L9"
/protein_id="YP_002374640.1"
/db_xref="GI:218249173"
/db_xref="GeneID:7106913"
/translation="MKVILKEDFINLGKEGDTVEVRDGFARNYLLPKGFAVFSNKHNI
EIFNQKRRSILKKQEAKKQMANDLKSKLDLVKLEFFMKSNDSGKLFHSINSLNIADEL
LKLGFDIERKKIDIHHGTLKTFGTYDVTIKLYEGISSIIKVEIKKEKKQEDKKSLSKK
LNKADEQGERAEV"
misc_feature complement(111113..111514)
/gene="rplI"
/locus_tag="BbuZS7_0112"
/note="ribosomal protein L9; Region: L9; TIGR00158"
/db_xref="CDD:129262"
misc_feature complement(111374..111514)
/gene="rplI"
/locus_tag="BbuZS7_0112"
/note="Ribosomal protein L9, N-terminal domain; Region:
Ribosomal_L9_N; pfam01281"
/db_xref="CDD:201708"
misc_feature complement(111113..111331)
/gene="rplI"
/locus_tag="BbuZS7_0112"
/note="Ribosomal protein L9, C-terminal domain; Region:
Ribosomal_L9_C; pfam03948"
/db_xref="CDD:146531"
gene complement(111531..111821)
/gene="rpsR"
/locus_tag="BbuZS7_0113"
/db_xref="GeneID:7106710"
CDS complement(111531..111821)
/gene="rpsR"
/locus_tag="BbuZS7_0113"
/note="binds as a heterodimer with protein S6 to the
central domain of the 16S rRNA; helps stabilize the
platform of the 30S subunit"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S18"
/protein_id="YP_002374641.1"
/db_xref="GI:218249765"
/db_xref="GeneID:7106710"
/translation="MYKDRDTNQRDSRFENQQDGFKKNSNFRFFKRKSCKFCDSGKHP
DYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRARYMALLPFVKK"
misc_feature complement(111534..>111698)
/gene="rpsR"
/locus_tag="BbuZS7_0113"
/note="30S ribosomal protein S18; Reviewed; Region: rpsR;
PRK00391"
/db_xref="CDD:178997"
gene complement(111835..112284)
/locus_tag="BbuZS7_0114"
/db_xref="GeneID:7106938"
CDS complement(111835..112284)
/locus_tag="BbuZS7_0114"
/note="identified by match to protein family HMM PF00436;
match to protein family HMM TIGR00621"
/codon_start=1
/transl_table=11
/product="single-stranded DNA-binding protein"
/protein_id="YP_002374642.1"
/db_xref="GI:218249309"
/db_xref="GeneID:7106938"
/translation="MADINSLVLSGRLTRDSELSYTESGMAVLRFSIANNRRMKKNDE
WIDYPQYFDCVIFSKRAESLNDYLKKGKQVVVSGSLKYESWQDRNTGDKRSKVNIFVD
NLQMFSSGSNTIQMQDSDVNSLTNHKKEDVVKDIDIVDDKFSEDIPF"
misc_feature complement(<111943..112281)
/locus_tag="BbuZS7_0114"
/note="Single-stranded DNA-binding protein [DNA
replication, recombination, and repair]; Region: Ssb;
COG0629"
/db_xref="CDD:30974"
misc_feature complement(111967..112266)
/locus_tag="BbuZS7_0114"
/note="SSB_OBF: A subfamily of OB folds similar to the OB
fold of ssDNA-binding protein (SSB). SSBs bind with high
affinity to ssDNA. They bind to and protect ssDNA
intermediates during DNA metabolic pathways. All bacterial
and eukaryotic SSBs studied to date...; Region: SSB_OBF;
cd04496"
/db_xref="CDD:72968"
misc_feature complement(order(111994..111996,112003..112005,
112039..112041,112066..112068,112129..112131,
112135..112137,112174..112182,112255..112266))
/locus_tag="BbuZS7_0114"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:72968"
misc_feature complement(order(111985..111987,111991..111993,
112033..112038,112042..112044,112048..112050,
112072..112077,112114..112116,112120..112122,
112126..112128,112132..112134,112138..112143,
112171..112176,112195..112197,112225..112227,
112243..112251))
/locus_tag="BbuZS7_0114"
/note="ssDNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:72968"
misc_feature complement(order(111970..111972,112054..112056,
112060..112062,112066..112068))
/locus_tag="BbuZS7_0114"
/note="tetramer (dimer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:72968"
gene complement(112296..112715)
/gene="rpsF"
/locus_tag="BbuZS7_0115"
/db_xref="GeneID:7106519"
CDS complement(112296..112715)
/gene="rpsF"
/locus_tag="BbuZS7_0115"
/note="binds cooperatively with S18 to the S15-16S
complex, allowing platform assembly to continue with S11
and S21"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S6"
/protein_id="YP_002374643.1"
/db_xref="GI:218249203"
/db_xref="GeneID:7106519"
/translation="MIKRYEACFLFKSEEIEYKGSLEEVKKSLEFFGATDVVSNFIGE
RALEYPIKKQARGRYEIIEFSMEGNNLKEFESRLKLIKNLLRYMILVKIVRKINTKKI
KRRNFREFRDNVDKDSLKGASKVETPTGPESTDIQEK"
misc_feature complement(112446..112709)
/gene="rpsF"
/locus_tag="BbuZS7_0115"
/note="ribosomal protein S6; Region: S6; TIGR00166"
/db_xref="CDD:129270"
gene complement(112855..114549)
/locus_tag="BbuZS7_0116"
/db_xref="GeneID:7106742"
CDS complement(112855..114549)
/locus_tag="BbuZS7_0116"
/note="identified by match to protein family HMM PF00367;
match to protein family HMM PF02378"
/codon_start=1
/transl_table=11
/product="PTS system subunit IIABC"
/protein_id="YP_002374644.1"
/db_xref="GI:218249373"
/db_xref="GeneID:7106742"
/translation="MINFIKIINFSSLQKFSKALRVPISILPVSCLLIGIGSVFSNSS
SIVYVDKIFIQNVLGLMKAIGNAILLNMPLIFSIGISIGVARMGQGTAALGGLIGYLT
FNITENYFIEAFSGLVEAETMSSVGRINFFGVQTLNTGIAGSLAVGLLVGYLHNKFYN
IKLPKPFVFFSECHFVPIVIILPFCVFLAIFFCLIWSSFDDLIASLGLFVFRFEYFGS
FLYGFLNRLLLPLGLHSILSFPFEFTSLGGVEIVNGYTVRGLKNIFYAQLLDPSLGKF
SAGFAKISSGFYLSIMFGLPGAALGVYKGIVHEDKNKVAALLFSGALTAFLTGITEPL
EFLFIFTAPLLYFVHAAYSGFALLLANFFNVTIGNSFSTGFLDFFMFGILQGNSKTNW
ISVLPLGAMFFALYYFTFSWLYRYFDFQIFVTDDPFFEGQEGKLESLGIAHLLIQGLG
GFDNITKLDVCSTRLHVDVVNTELVDNNLLKEAGVLKIGLVNGKVQLFYGSNVYYIKN
AIDTYSPKSLFEASVMVAVDNVKKGFKTYIEMKEDKKLEKQGKSGKTYKLSELEED"
misc_feature complement(113245..114522)
/locus_tag="BbuZS7_0116"
/note="Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
transport and metabolism]; Region: PtsG; COG1263"
/db_xref="CDD:31455"
misc_feature complement(113014..114513)
/locus_tag="BbuZS7_0116"
/note="PTS system, maltose and glucose-specific IIBC
component; Region: PTS-IIBC-malX; TIGR02004"
/db_xref="CDD:162655"
misc_feature complement(113011..113229)
/locus_tag="BbuZS7_0116"
/note="PTS_IIB, PTS system, glucose/sucrose specific IIB
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIB_glc; cd00212"
/db_xref="CDD:29267"
misc_feature complement(113152..113172)
/locus_tag="BbuZS7_0116"
/note="active site turn [active]"
/db_xref="CDD:29267"
misc_feature complement(113167..113169)
/locus_tag="BbuZS7_0116"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29267"
gene 114753..115454
/locus_tag="BbuZS7_0117"
/db_xref="GeneID:7106670"
CDS 114753..115454
/locus_tag="BbuZS7_0117"
/note="identified by match to protein family HMM PF03006;
match to protein family HMM TIGR01065"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374645.1"
/db_xref="GI:218249190"
/db_xref="GeneID:7106670"
/translation="MLRENKLKNYSLSDVNTSKIPKNELFSSISHLFGIILSIIGTTI
LVTISTLKKKDLHVVVFLIYGFSMTLLYVMSTLYHIFPKGSKIKKIFRKFDHISIFIL
IAGTYTPACAILVPNKSGLIILCIVWSLAIIGIIFKIIFTNSPGWFNGFIFIIMGWII
IFKIKPIYKALNGKGFFWLVFGGIVYTIGGIVYILSKKFNPTINMKMHDVFHILIIIA
SASHFWLMLKYISNF"
misc_feature 114819..115442
/locus_tag="BbuZS7_0117"
/note="Haemolysin-III related; Region: HlyIII; cl03831"
/db_xref="CDD:208057"
gene complement(115451..116752)
/gene="rseP"
/locus_tag="BbuZS7_0118"
/db_xref="GeneID:7106729"
CDS complement(115451..116752)
/gene="rseP"
/locus_tag="BbuZS7_0118"
/EC_number="3.4.24.-"
/note="identified by match to protein family HMM PF02163;
match to protein family HMM TIGR00054"
/codon_start=1
/transl_table=11
/product="RIP metalloprotease RseP"
/protein_id="YP_002374646.1"
/db_xref="GI:218249662"
/db_xref="GeneID:7106729"
/translation="MYILFSVLALSFIIFIHELGHFLFAKLFKVKVEVFSVGIGPSIL
KFKINNTEYRLSPILLGGYCKLKGFDHLEKELKANKELEADKDSLFGISHFKKILIYF
AGPLFNLIFSFVVFIFISMAGVIYFDYSSRVSILNKDSFLKDKFRDGDVILKVNNKKI
EYFSDLRKFIPEEKSTVTFDVLREKENITFKETISLQDFLKEIGPWADLVIADVVSNS
PAKIAGMKPGDEIISIDNVILKNKRDLDYFLKNLNSDVVEIKFSRNGEIFSSKLVFHD
KNKMIGIYFSPPLKRVVKVENVSSAIKNSFFKVVSALQDILYSIFLLMTNFLNTSKSV
SGPVGIVGILSSSYSLGILYWINSISFLSLILAGMNLFFIVIPIFDGGQIFISFIELL
RGKRFKAKTIYSFYSFGIFFGLFLFGLGLFNDLKGLLSIFN"
misc_feature complement(115541..116752)
/gene="rseP"
/locus_tag="BbuZS7_0118"
/note="RIP metalloprotease RseP; Region: TIGR00054"
/db_xref="CDD:161683"
misc_feature complement(<116426..116746)
/gene="rseP"
/locus_tag="BbuZS7_0118"
/note="RseP-like Site-2 proteases (S2P), zinc
metalloproteases (MEROPS family M50A), cleave
transmembrane domains of substrate proteins, regulating
intramembrane proteolysis (RIP) of diverse signal
transduction mechanisms. In Escherichia coli, the S2P
homolog...; Region: S2P-M50_PDZ_RseP-like; cd06163"
/db_xref="CDD:100084"
misc_feature complement(order(116690..116692,116699..116704))
/gene="rseP"
/locus_tag="BbuZS7_0118"
/note="active site"
/db_xref="CDD:100084"
misc_feature complement(116180..>116317)
/gene="rseP"
/locus_tag="BbuZS7_0118"
/note="PDZ domain of bacterial and plant zinc
metalloprotases, presumably membrane-associated or
integral membrane proteases, which may be involved in
signalling and regulatory mechanisms. May be responsible
for substrate recognition and/or binding, as most PDZ...;
Region: PDZ_metalloprotease; cd00989"
/db_xref="CDD:29046"
misc_feature complement(115931..116158)
/gene="rseP"
/locus_tag="BbuZS7_0118"
/note="PDZ domain of bacterial and plant zinc
metalloprotases, presumably membrane-associated or
integral membrane proteases, which may be involved in
signalling and regulatory mechanisms. May be responsible
for substrate recognition and/or binding, as most PDZ...;
Region: PDZ_metalloprotease; cd00989"
/db_xref="CDD:29046"
misc_feature complement(order(116003..116008,116015..116020,
116147..116149,116153..116158))
/gene="rseP"
/locus_tag="BbuZS7_0118"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29046"
misc_feature complement(115550..>115687)
/gene="rseP"
/locus_tag="BbuZS7_0118"
/note="Site-2 protease (S2P) class of zinc
metalloproteases (MEROPS family M50) cleaves transmembrane
domains of substrate proteins, regulating intramembrane
proteolysis (RIP) of diverse signal transduction
mechanisms. Members of this family use proteolytic...;
Region: S2P-M50; cl10020"
/db_xref="CDD:209123"
misc_feature complement(order(115628..115630,115637..115645))
/gene="rseP"
/locus_tag="BbuZS7_0118"
/note="putative substrate binding region [chemical
binding]; other site"
/db_xref="CDD:100078"
gene complement(116771..117622)
/gene="cdsA"
/locus_tag="BbuZS7_0119"
/db_xref="GeneID:7106122"
CDS complement(116771..117622)
/gene="cdsA"
/locus_tag="BbuZS7_0119"
/EC_number="2.7.7.41"
/note="identified by match to protein family HMM PF01148"
/codon_start=1
/transl_table=11
/product="phosphatidate cytidylyltransferase"
/protein_id="YP_002374647.1"
/db_xref="GI:218249514"
/db_xref="GeneID:7106122"
/translation="MLSKVKRFAFFARLGTFLFFVPLILFLIFLDFKNYLFLNILIFI
FSGFAAKEVNDLLKLKFKFSGLSSILSFFLGFAPPILTYIHFNVFYLGMNVIYYLFIA
LVFSNWIVDLVFIKEHEIGNFLSQATSILFILIYPGVLMSFTVSITTLPKAPFLMLML
FAMVSGNDTFAYLFGYFLGKNSYRPTIISPNKTLMGFFGGILFSVLTAIFAVVFRLIN
LSYGESIILGILIGVFTIIGDLFESGLKRSAGVKDSGKIVPGRGGALDSIDSFLLTGP
IFYLYLS"
misc_feature complement(116777..>117388)
/gene="cdsA"
/locus_tag="BbuZS7_0119"
/note="Cytidylyltransferase family; Region: CTP_transf_1;
pfam01148"
/db_xref="CDD:110170"
gene complement(117624..118316)
/gene="uppS"
/locus_tag="BbuZS7_0120"
/db_xref="GeneID:7106591"
CDS complement(117624..118316)
/gene="uppS"
/locus_tag="BbuZS7_0120"
/EC_number="2.5.1.31"
/note="catalyzes the formation of UDP pyrophosphate from
isopentenyl pyrophosphate"
/codon_start=1
/transl_table=11
/product="UDP pyrophosphate synthase"
/protein_id="YP_002374648.1"
/db_xref="GI:218249817"
/db_xref="GeneID:7106591"
/translation="MNKSSLPSHVGIIMDGNRRWALGKGLSFSEGYKEGLKRAKEIVK
HSLKIGIKYLSFYVFSTENWKRDDCEIEELMFLIASYLRAEFNFYKKNGIKIIVSGDV
DSLGEEVKSSIKDSVSFSKNFNNLVLNLAINYGGRNEILRAVRKFVSNNFDLESLNEN
TFSNFLDNPELPDLDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYENRYSKDL
ECFQLRRRNFGR"
misc_feature complement(117627..118316)
/gene="uppS"
/locus_tag="BbuZS7_0120"
/note="undecaprenyl pyrophosphate synthase; Provisional;
Region: PRK14837"
/db_xref="CDD:173298"
misc_feature complement(117627..118280)
/gene="uppS"
/locus_tag="BbuZS7_0120"
/note="Putative undecaprenyl diphosphate synthase; Region:
Prenyltransf; pfam01255"
/db_xref="CDD:201689"
misc_feature complement(118272..118274)
/gene="uppS"
/locus_tag="BbuZS7_0120"
/note="catalytic residue [active]"
/db_xref="CDD:29593"
misc_feature complement(118260..118271)
/gene="uppS"
/locus_tag="BbuZS7_0120"
/note="putative FPP diphosphate binding site; other site"
/db_xref="CDD:29593"
misc_feature complement(order(117927..117929,117933..117935,
117978..117980,117999..118001,118080..118088,
118092..118097,118137..118151))
/gene="uppS"
/locus_tag="BbuZS7_0120"
/note="putative FPP binding hydrophobic cleft; other site"
/db_xref="CDD:29593"
misc_feature complement(order(117720..117722,117732..117734,
117741..117743,117753..117755,117762..117767,
117846..117848,117882..117884,117906..117908))
/gene="uppS"
/locus_tag="BbuZS7_0120"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29593"
misc_feature complement(order(117762..117764,117780..117782))
/gene="uppS"
/locus_tag="BbuZS7_0120"
/note="putative IPP diphosphate binding site; other site"
/db_xref="CDD:29593"
gene complement(118322..118876)
/gene="frr"
/locus_tag="BbuZS7_0121"
/db_xref="GeneID:7106197"
CDS complement(118322..118876)
/gene="frr"
/locus_tag="BbuZS7_0121"
/note="Rrf; Frr; ribosome-recycling factor; release factor
4; RF4; recycles ribosomes upon translation termination
along with release factor RF-3 and elongation factor EF-G;
A GTPase-dependent process results in release of 50S from
70S; inhibited by release factor RF-1; essential for
viability; structurally similar to tRNAs"
/codon_start=1
/transl_table=11
/product="ribosome recycling factor"
/protein_id="YP_002374649.1"
/db_xref="GI:218249310"
/db_xref="GeneID:7106197"
/translation="MEDYKAFLDEKMSKVLLSLDNEYKTLRTGRISSNIFDKIFIQYH
GQRTPITQVSSIRIPEARLVVIQPWDKTILNKIEQAILNSDLSMNPSSDGSVIRIKVP
ALTSERRQDIVKHAKKIAEEHKISTRNIRQDLNNKVKKQEKESEITEDSLKRILDDIQ
KSTDIYIKKIDAILESKIQEIMEV"
misc_feature complement(118325..118876)
/gene="frr"
/locus_tag="BbuZS7_0121"
/note="ribosome recycling factor; Reviewed; Region: frr;
PRK00083"
/db_xref="CDD:178850"
misc_feature complement(118331..118867)
/gene="frr"
/locus_tag="BbuZS7_0121"
/note="Ribosome recycling factor (RRF). Ribosome recycling
factor dissociates the posttermination complex, composed
of the ribosome, deacylated tRNA, and mRNA, after
termination of translation. Thus ribosomes are 'recycled'
and ready for another round of...; Region: RRF; cd00520"
/db_xref="CDD:29621"
misc_feature complement(order(118565..118576,118784..118795))
/gene="frr"
/locus_tag="BbuZS7_0121"
/note="hinge region; other site"
/db_xref="CDD:29621"
gene complement(118914..119753)
/gene="tsf"
/locus_tag="BbuZS7_0122"
/db_xref="GeneID:7106520"
CDS complement(118914..119753)
/gene="tsf"
/locus_tag="BbuZS7_0122"
/note="EF-Ts; functions during elongation stage of protein
translation; forms a dimer; associates with EF-Tu-GDP
complex and promotes exchange of GDP to GTP resulting in
regeneration of the active form of EF-Tu"
/codon_start=1
/transl_table=11
/product="elongation factor Ts"
/protein_id="YP_002374650.1"
/db_xref="GI:218249673"
/db_xref="GeneID:7106520"
/translation="MSIISPQDVKKLREETNAGFGDCKKALSVAGGDFELAKKKLREM
GIASAEKRLDRDAKEGRVFSYSNNIHAGLLLVSCETDFVALNHNFVNFGNSLIKELVE
SGRNSLATSQELELKNLAATIKENIQVKKIFITEIQSNEFVKIYLHGEQSKIGVLVKL
KVDDFSKTEDKMLQDFAMDLALHVAALAPIYLRNDDVCPNYIKEQEEIFAKQLELSGK
SESIVKGIVAGKIKKHLAEISLLEQGFVKNDKLTVREMLEEVSKAISSKIEIVEFKYL
RIG"
misc_feature complement(118917..119753)
/gene="tsf"
/locus_tag="BbuZS7_0122"
/note="translation elongation factor Ts; Region: tsf;
TIGR00116"
/db_xref="CDD:188027"
misc_feature complement(119631..119744)
/gene="tsf"
/locus_tag="BbuZS7_0122"
/note="Ubiquitin Associated domain. The UBA domain is a
commonly occurring sequence motif in some members of the
ubiquitination pathway, UV excision repair proteins, and
certain protein kinases. Although its specific role is so
far unknown, it has been...; Region: UBA; cl00153"
/db_xref="CDD:206865"
misc_feature complement(<119466..119585)
/gene="tsf"
/locus_tag="BbuZS7_0122"
/note="Elongation factor TS; Region: EF_TS; pfam00889"
/db_xref="CDD:189759"
misc_feature complement(118917..119327)
/gene="tsf"
/locus_tag="BbuZS7_0122"
/note="Elongation factor TS; Region: EF_TS; pfam00889"
/db_xref="CDD:189759"
gene complement(119750..120538)
/gene="rpsB"
/locus_tag="BbuZS7_0123"
/db_xref="GeneID:7106133"
CDS complement(119750..120538)
/gene="rpsB"
/locus_tag="BbuZS7_0123"
/note="one of the last subunits in the assembly of the 30S
subunit; absence of S2 does not inhibit assembly but
results in an inactive subunit"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S2"
/protein_id="YP_002374651.1"
/db_xref="GI:218249399"
/db_xref="GeneID:7106133"
/translation="MAIITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQ
KTLQGIKDSYELVQRVIKDGKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLS
NFNTIRKSVQKLKKLEKMEVDGTFDMISKKEISQLNREKSKLAKNLTGIKDMETLPGA
IFIIDPKREQIAINEARKLKIPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIIS
DAILESDKEVGIQIIENLNEEDLMKEIEIKNDKSDSIEEGGNNL"
misc_feature complement(119870..120514)
/gene="rpsB"
/locus_tag="BbuZS7_0123"
/note="Ribosomal protein S2 (RPS2), involved in formation
of the translation initiation complex, where it might
contact the messenger RNA and several components of the
ribosome. It has been shown that in Escherichia coli RPS2
is essential for the binding of...; Region: RPS2; cd01425"
/db_xref="CDD:100106"
misc_feature complement(order(120005..120007,120014..120016,
120230..120235,120242..120250,120254..120256,
120428..120436,120461..120466))
/gene="rpsB"
/locus_tag="BbuZS7_0123"
/note="rRNA interaction site [nucleotide binding]; other
site"
/db_xref="CDD:100106"
misc_feature complement(order(119948..119959,119999..120001,
120005..120010))
/gene="rpsB"
/locus_tag="BbuZS7_0123"
/note="S8 interaction site; other site"
/db_xref="CDD:100106"
misc_feature complement(119888..119905)
/gene="rpsB"
/locus_tag="BbuZS7_0123"
/note="putative laminin-1 binding site; other site"
/db_xref="CDD:100106"
gene complement(120753..121031)
/locus_tag="BbuZS7_0124"
/db_xref="GeneID:7106390"
CDS complement(120753..121031)
/locus_tag="BbuZS7_0124"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374652.1"
/db_xref="GI:218249279"
/db_xref="GeneID:7106390"
/translation="MIVFFSHLILTNIVISFLVSFFVAFLNILNFKFIVVYLISFLGG
IIFQFFIPFFYSDYYERQIDFVLYLFPILGSVILIGLIKFSERNKNDL"
gene complement(121050..121772)
/locus_tag="BbuZS7_0125"
/db_xref="GeneID:7106489"
CDS complement(121050..121772)
/locus_tag="BbuZS7_0125"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374653.1"
/db_xref="GI:218249885"
/db_xref="GeneID:7106489"
/translation="MGFFGCGLDNILILPSPEKVDNRISRDSVAFFLPAGYFSNQAAG
KLRGFDIYYKFYPEGANYHISSFQKSLEKDFEALKGVFDNVSEFNNRGFYKINLSSTV
YSGKPVFKLNKEWVDSKLPLYFEINFGELRKDVPGEAFITVKNGNTSSSVILEKKNIY
RSHIDKGEYVGFSKSIKKSNLLDKQKRPIDLKHINEDFFTKDIAPKYNLAIFVMGVGS
IVDDAYSVLINLGDLSGFSLSN"
gene complement(121829..122440)
/locus_tag="BbuZS7_0126"
/db_xref="GeneID:7106344"
CDS complement(121829..122440)
/locus_tag="BbuZS7_0126"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374654.1"
/db_xref="GI:218249880"
/db_xref="GeneID:7106344"
/translation="MAKNNLLVFFIAIIFVFVSIIVVFYNSLGKDYVKSGGEIVENLE
KDLNDYLKENDAKEREKIFLRIRELISKEKEISSYFISRFYLARAVYFQSQAQYDEAI
KDLDIVIKAKGIESEIAFLNKAAVYEKMGLKEDALLVYEDLINSTSLDFLKVRALLSK
AILIEEKDKELAVKVYEEIVKFPYENNLYINMANNKILELKQN"
gene complement(122440..124095)
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/db_xref="GeneID:7106339"
CDS complement(122440..124095)
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="in Escherichia coli this protein is involved in
binding to the leader sequence of mRNAs and is itself
bound to the 30S subunit; autoregulates expression via a
C-terminal domain; in most gram negative organisms this
protein is composed of 6 repeats of the S1 domain while in
gram positive there are 4 repeats; the S1 nucleic
acid-binding domain is found associated with other
proteins"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S1"
/protein_id="YP_002374655.1"
/db_xref="GI:218249762"
/db_xref="GeneID:7106339"
/translation="MENQKDLQENYLKVLERVELGSRVSGAVVNIMKDYVLVDIGYKS
EGFIKIEEFENVPQVGDRLEAIVVRIGGELGLILSVEKLNSLNFQDKVYEYIQNKKII
KGKVLVELPNGYKIQINENVSGFMPFYLSSKSKDEKLKRGSVVEFYILEASEADGLRL
ILDRRTLEKERDLAKRIELVSSYNEEDVVDGVVERITEYGAIVKIKNFVTGILHKRNI
AFNQVENVEDFVRVGDKLKLKIIKINPQTGKMELSLKALKANPWDSVDVKYKIDSIVK
GKVVKILPFGAVIELDSELSGFLHISNFSWIRVVKSPQELIKLGQIVEVKILEIDKEN
QKISLGIKQINENPWERLTEKYPIGRVVQGVVTNITKTGAFVNIEEGIDAYVSKFDIS
WLEEIDPEEYFKIGDLVNGKVLEVDKRKRNVRLGIKQLEESPWEDFSKSYKKGDTIEV
EIVEKKSKGFQVRVYNKIMGFISKIQLGDTKESSLETFEKLNVGDKLKVVITSIDSKD
KSVLLSYREYENQRSREEISSYLFKGNDEESYKPFENLLKRDE"
misc_feature complement(122449..124095)
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="30S ribosomal protein S1; Reviewed; Region: rpsA;
PRK06299"
/db_xref="CDD:180520"
misc_feature complement(123862..124035)
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="S1_RPS1_repeat_ec1_hs1: Ribosomal protein S1 (RPS1)
domain. RPS1 is a component of the small ribosomal subunit
thought to be involved in the recognition and binding of
mRNA's during translation initiation. The bacterial RPS1
domain architecture consists...; Region:
S1_RPS1_repeat_ec1_hs1; cd05687"
/db_xref="CDD:88442"
misc_feature complement(order(123949..123951,123955..123957,
123985..123987,124009..124011))
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88442"
misc_feature complement(123331..123546)
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="Ribosomal protein S1-like RNA-binding domain;
Region: S1; smart00316"
/db_xref="CDD:197648"
misc_feature complement(order(123454..123456,123460..123462,
123490..123492,123514..123516))
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88416"
misc_feature complement(123070..123288)
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="Ribosomal protein S1-like RNA-binding domain;
Region: S1; smart00316"
/db_xref="CDD:197648"
misc_feature complement(order(123196..123198,123202..123204,
123232..123234,123256..123258))
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88416"
misc_feature complement(122818..123012)
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="S1_like: Ribosomal protein S1-like RNA-binding
domain. Found in a wide variety of RNA-associated
proteins. Originally identified in S1 ribosomal protein.
This superfamily also contains the Cold Shock Domain
(CSD), which is a homolog of the S1 domain; Region:
S1_like; cd00164"
/db_xref="CDD:88416"
misc_feature complement(order(122935..122937,122941..122943,
122971..122973,122995..122997))
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88416"
misc_feature complement(122548..122769)
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="Ribosomal protein S1-like RNA-binding domain;
Region: S1; smart00316"
/db_xref="CDD:197648"
misc_feature complement(order(122677..122679,122683..122685,
122713..122715,122737..122739))
/gene="rpsA"
/locus_tag="BbuZS7_0127"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88416"
gene complement(124098..124763)
/gene="cmk"
/locus_tag="BbuZS7_0128"
/db_xref="GeneID:7106935"
CDS complement(124098..124763)
/gene="cmk"
/locus_tag="BbuZS7_0128"
/EC_number="2.7.4.14"
/note="identified by match to protein family HMM PF02224;
match to protein family HMM TIGR00017"
/codon_start=1
/transl_table=11
/product="cytidylate kinase"
/protein_id="YP_002374656.1"
/db_xref="GI:218249654"
/db_xref="GeneID:7106935"
/translation="MIIAIDGPSASGKSSIARELGVRLNYKFISSGHLYRIITLIAQR
SLMNSCDFISEDSLLNLILENDISFNNSTFLLNGENVENQILNDKIDFQVSFYSSYVG
IRNIVNKKLREVVKFSDDNYIIEGRDITTVVFPESEFKIYLDASVKVRALRRYKQRNG
NETLEELERTLKRRDDVDKKKQYGKLKLSKGVFYLDTSYKGLDDVCNIIIEKFNLKKV
RER"
misc_feature complement(124125..124763)
/gene="cmk"
/locus_tag="BbuZS7_0128"
/note="cytidylate kinase; Region: cmk; TIGR00017"
/db_xref="CDD:129128"
misc_feature complement(<124293..124760)
/gene="cmk"
/locus_tag="BbuZS7_0128"
/note="Cytidine monophosphate kinase (CMPK) catalyzes the
reversible phosphorylation of cytidine monophosphate (CMP)
to produce cytidine diphosphate (CDP), using ATP as the
preferred phosphoryl donor; Region: CMPK; cd02020"
/db_xref="CDD:73296"
misc_feature complement(order(124380..124385,124452..124454))
/gene="cmk"
/locus_tag="BbuZS7_0128"
/note="CMP-binding site; other site"
/db_xref="CDD:73296"
gene complement(124747..125496)
/locus_tag="BbuZS7_0129"
/db_xref="GeneID:7106114"
CDS complement(124747..125496)
/locus_tag="BbuZS7_0129"
/EC_number="5.4.99.-"
/note="identified by match to protein family HMM PF00849;
match to protein family HMM PF01479; match to protein
family HMM TIGR00093"
/codon_start=1
/transl_table=11
/product="RNA pseudouridine synthase"
/protein_id="YP_002374657.1"
/db_xref="GI:218249574"
/db_xref="GeneID:7106114"
/translation="MIALKAPRVHVFLAEKGVGSRRFCEELIRKKLVKVNNTIAKLGD
KVALGDRIIYKKQIFVFKDFQINNRIYLALNKPRNYLCSNFDVDGRKLAISLVQPLFK
ERVFSIGRLDFKSSGLLLFTNDGKFANDIIHPRQKVEREYIIESKKDIDENLLISFKS
GIKVKKEFFKLKSYEILNKNSARLILDEGKNREIRKVFLSKNIFLKKIHRIRIGNINL
DSLKEGQVKIVPLSKINSLKSRLEKLNDNSN"
misc_feature complement(124771..125484)
/locus_tag="BbuZS7_0129"
/note="16S rRNA uridine-516 pseudouridylate synthase and
related pseudouridylate synthases [Translation, ribosomal
structure and biogenesis]; Region: RsuA; COG1187"
/db_xref="CDD:31380"
misc_feature complement(125341..125475)
/locus_tag="BbuZS7_0129"
/note="S4 domain; Region: S4; pfam01479"
/db_xref="CDD:201819"
misc_feature complement(order(125356..125358,125362..125376,
125377..125382,125401..125403,125407..125412,
125419..125424,125428..125433,125437..125442,
125473..125475))
/locus_tag="BbuZS7_0129"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:29105"
misc_feature complement(124858..125286)
/locus_tag="BbuZS7_0129"
/note="Pseudouridine synthases catalyze the isomerization
of specific uridines in an RNA molecule to pseudouridines
(5-ribosyluracil, psi); Region: PseudoU_synth; cl00130"
/db_xref="CDD:211430"
misc_feature complement(order(124912..124914,125161..125172))
/locus_tag="BbuZS7_0129"
/note="active site"
/db_xref="CDD:211324"
gene complement(125483..126250)
/locus_tag="BbuZS7_0130"
/db_xref="GeneID:7106824"
CDS complement(125483..126250)
/locus_tag="BbuZS7_0130"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374658.1"
/db_xref="GI:218249298"
/db_xref="GeneID:7106824"
/translation="MSELGSYSISLDNFTGGIELFFEYVSMNRHVLRTLSLNQIIEEF
IVVSGDLNISIRGLIDFFYLANNLFYWKTQILFPLKFECKDKAERKVVERLICYSKNR
ENEKLQLNQAKNFKFYDSKIIEEFIFGDSGNFIKNINATANDNNKKKNLKRKSGTLKK
KVINKNFLCDKKFKAVYNKYELKIFEKKMKIISILNKESSVIFDSLLDFNADNYSFER
FSYFLVSLECKMLNIVNLGYLNNKLVLYRGCKINDCT"
misc_feature complement(<125876..126232)
/locus_tag="BbuZS7_0130"
/note="ScpA/B protein; Region: ScpA_ScpB; cl00598"
/db_xref="CDD:186098"
gene complement(126265..127362)
/gene="recA"
/locus_tag="BbuZS7_0131"
/db_xref="GeneID:7106508"
CDS complement(126265..127362)
/gene="recA"
/locus_tag="BbuZS7_0131"
/note="catalyzes the hydrolysis of ATP in the presence of
single-stranded DNA, the ATP-dependent uptake of
single-stranded DNA by duplex DNA, and the ATP-dependent
hybridization of homologous single-stranded DNAs"
/codon_start=1
/transl_table=11
/product="recombinase A"
/protein_id="YP_002374659.1"
/db_xref="GI:218249168"
/db_xref="GeneID:7106508"
/translation="MSKLKEKREKAVVGIERASKEEAIELARVQIEKAFGKGSLIKMG
ESPVGQGIKSMSSGSIVLDEALGIGGYPRGRIIEIFGPESSGKTTLTLQAIAEVQKEG
GIAAFIDAEHALDPVYAKALGVNVAELWLSQPDTGEQALEIAEHLIRSGGVDLIVVDS
VAALTPKLEIDGEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQIRMRIGVMF
GNPETTTGGNALKFYSSLRLEVRKIEQVTRSGSSDDVIGNKIRVKIVKNKVAPPFRKV
ELIIYFGKGISREAGILDAAIKHNLIQKTGSWYSLGDNKLGQGRESVIEYLSKEVELA
NNLDKRLRKIIFNNFDQENDNFIEFKEDESE"
misc_feature complement(126268..127305)
/gene="recA"
/locus_tag="BbuZS7_0131"
/note="recombinase A; Provisional; Region: recA; PRK09354"
/db_xref="CDD:181793"
misc_feature complement(126322..127305)
/gene="recA"
/locus_tag="BbuZS7_0131"
/note="RecA is a bacterial enzyme which has roles in
homologous recombination, DNA repair, and the induction of
the SOS response. RecA couples ATP hydrolysis to DNA
strand exchange; Region: recA; cd00983"
/db_xref="CDD:29984"
misc_feature complement(order(126376..126378,126514..126516,
126667..126669,126679..126681,126982..126987,
127000..127020,127024..127029,127237..127251,
127261..127263,127270..127275,127279..127284))
/gene="recA"
/locus_tag="BbuZS7_0131"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:29984"
misc_feature complement(127099..127122)
/gene="recA"
/locus_tag="BbuZS7_0131"
/note="Walker A motif; other site"
/db_xref="CDD:29984"
misc_feature complement(order(126514..126525,126589..126591,
126637..126639,126736..126738,126886..126888,
127009..127011,127018..127020,127030..127032,
127096..127116))
/gene="recA"
/locus_tag="BbuZS7_0131"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29984"
misc_feature complement(126886..126900)
/gene="recA"
/locus_tag="BbuZS7_0131"
/note="Walker B motif; other site"
/db_xref="CDD:29984"
gene complement(127376..130081)
/locus_tag="BbuZS7_0132"
/db_xref="GeneID:7106705"
CDS complement(127376..130081)
/locus_tag="BbuZS7_0132"
/note="contains N-terminal domain of unknown function
fused to transcription elongation factor; GreA is
necessary for efficient RNA polymerization through
arresting sites; cleaves the nascent transcript and allows
resumption of transcription elongation"
/codon_start=1
/transl_table=11
/product="transcript cleavage factor"
/protein_id="YP_002374660.1"
/db_xref="GI:218249878"
/db_xref="GeneID:7106705"
/translation="MSNVTTIEKLDSILQEDKWTRIVVNNYSLAKIKELDDLINNIID
EGLTEDVLDICGRHLKDVKKSIAGLYISGMLIYSRRPLNDMNLLAVIDLFSQNLKWAL
VEHICNEMLLISENKHALYTLAKIYAQNNENDKLPGIWTRIVEADIDDTVFVRQLATY
YETIDLQKSIFYFRKAIYRFIDKKQMSGIREVWAKLIHYVSDDFDSFLLILQKIEKDL
GFKKAIVLYEDLFDHYSLTDNVDETIEILKGILKLDNKNHKARENLVKFLRERYKDVK
NIEDYLVKSDIENLDKNFVDVYLDFEKYLFFAKGNFVYHQTWSVGIVRDVNDNGITVD
FVSKRGHFIGFDMAMSALSPLSREDIRVLKAVTPKEELADRVKKDIEWAIKVIIKSYK
AIDLKGIKKELVPSLMTQSSWNSWSLKAKQILKDNPHFVMDSGKLDCYIYNERSSNLN
EKMYDKFKIEKDFYKRYEIFINYCNVKGIVKDLHIEEEMLNYFLIYVNNFTKVDHHVV
SSYVILKSLGNFSEELSSKVNIEKDVNLESLLKEYPKGIVDLFDSILNAEIKKELVVL
IKEELSNWILYYKELFPHSVNKRLVESLYKEDPREVEKLFNYVIKNYKIYKDAYIWIL
KHCKAYSIELSYSDSDLLSNLIKILTDSVIKINNKNNSVASKRIYKMVINLLVKDGYL
KSVLEVVRDEELAKRVYMTCFYVKDFPPKDLLEIKSIIRQLFDSVEFEDEKMQLAGER
MEIGFLTILSSLNKKQKELKYLKEVEIPENSKEIGKARELGDLKENAEYHSAKEKQQF
LTKRLNSLMLEIENAKVIDTKDLQSSVVGFGTKVVILNEVTGKDESYLILGPWESNPD
EGIISYKSPFGENLLDSREGDSLNFVINNTNFKYFVKKIEPIKFS"
misc_feature complement(127379..130081)
/locus_tag="BbuZS7_0132"
/note="transcript cleavage factor/unknown domain fusion
protein; Provisional; Region: PRK14720"
/db_xref="CDD:184804"
misc_feature complement(127637..127837)
/locus_tag="BbuZS7_0132"
/note="Transcription elongation factor, N-terminal;
Region: GreA_GreB_N; pfam03449"
/db_xref="CDD:190636"
misc_feature complement(127391..127621)
/locus_tag="BbuZS7_0132"
/note="Transcription elongation factor, GreA/GreB, C-term;
Region: GreA_GreB; pfam01272"
/db_xref="CDD:201702"
gene complement(130119..131039)
/locus_tag="BbuZS7_0133"
/db_xref="GeneID:7106337"
CDS complement(130119..131039)
/locus_tag="BbuZS7_0133"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374661.1"
/db_xref="GI:218249377"
/db_xref="GeneID:7106337"
/translation="MIKEIYLDFRKGNFKEALVKSEEAHSLDFDNIEILTALKSSVYW
NGQVESLDRIGQDYEKAEFLIREWNNFAGRYLKKMGCNFLQGRNSIKYFVFQTCLYIY
KNIYKMHPENLDLLIKIAKSYKGMGNYERAINVFLQILGDFKDNSDVVAELADSYALV
DEIKEAKVLFREAFFINPQKIDIYSLESDMILRLIDLIKSDRNISDDLIKEWIPVYGS
LNGVFNIKRELRPIELGQLKQSVYSLRNELKEKSYRSINESILLPRLINKYFWLIDHY
VRIKEDRARIDEILLYIKEIDLGIYQQYVN"
misc_feature complement(130503..130814)
/locus_tag="BbuZS7_0133"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(130560..130565,130572..130577,
130584..130589,130665..130670,130677..130682,
130686..130691,130794..130799,130806..130811))
/locus_tag="BbuZS7_0133"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(130521..130523,130530..130532,
130542..130544,130578..130580,130623..130625,
130632..130634,130644..130646,130680..130682,
130725..130727,130734..130736,130746..130748,
130800..130802))
/locus_tag="BbuZS7_0133"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(130503..130688)
/locus_tag="BbuZS7_0133"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:205610"
gene 131247..132374
/locus_tag="BbuZS7_0134"
/db_xref="GeneID:7106674"
CDS 131247..132374
/locus_tag="BbuZS7_0134"
/note="identified by match to protein family HMM PF07719"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374662.1"
/db_xref="GI:218249432"
/db_xref="GeneID:7106674"
/translation="MEPNKIINKSIYYYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLG
MSYLRIGNLGNAQTYLKKAYTLNPSESNIKQAIAILLVSQGKEEKAIQIWLKMIEENQ
EVDRSELSLEIIRKNPIKGSAFFKNSNLYEKLFPTIKAIPDKNSTKLIIIIIIGGIVF
ISMLAIYFIFYEQKTTTSANLKAEINKNLNNIAAYIDDIKINNKEKIKNEEGQFILIL
TSEEIKNSFEKIKIYLKKGKDNFARVEINKILNSNASESIKLKAKNLASFISRPDFIS
FNEHLNLKDIKKDPSIYSNVYVKWEGVVNNIEKKDNIIQFDFYVGYNKNVLSGIIPTK
TTFDIDIDFKDNVEILGQIEYKKNKLTLNAITIRKIDKNEN"
misc_feature 131307..131543
/locus_tag="BbuZS7_0134"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(131310..131312,131322..131324,131331..131333,
131376..131378,131412..131414,131424..131426,
131433..131435,131478..131480,131514..131516,
131526..131528,131535..131537)
/locus_tag="BbuZS7_0134"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature order(131367..131372,131376..131381,131388..131393,
131469..131474,131481..131486,131493..131498)
/locus_tag="BbuZS7_0134"
/note="binding surface"
/db_xref="CDD:29151"
gene complement(132421..133791)
/gene="hisS"
/locus_tag="BbuZS7_0135"
/db_xref="GeneID:7106426"
CDS complement(132421..133791)
/gene="hisS"
/locus_tag="BbuZS7_0135"
/EC_number="6.1.1.21"
/note="catalyzes a two-step reaction, first charging a
histidine molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA
synthetase; forms homodimers; some organisms have a
paralogous gene, hisZ, that is similar to hisS and
produces a protein that performs the first step in
histidine biosynthesis along with HisG"
/codon_start=1
/transl_table=11
/product="histidyl-tRNA synthetase"
/protein_id="YP_002374663.1"
/db_xref="GI:218249602"
/db_xref="GeneID:7106426"
/translation="MDIKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVL
EYSDLLLKKSGDETEKQIYRFKDNGGRDVSMRFDLTVPFARFVATNISALKLPFRRSQ
FGKVFRGENSQKGRYREFMQFDFDIVGEDTFRGDAEILSVVYYGLEEIFLNFIEGINK
KFIIHYSHIGILNSFFEKLGLKEKSIFILRNIDKIDKIGIDKVKEALLLEIEKEAVDS
ILSLVSLQGTFKDKIQALKSILGDNESIKRVEDVFQHLSLLKIQDSFNLNLKISRGLD
YYTGIVFESEVFGSNMGSVCSGGRYDNLVSSFSNSIQKISGVGGSFGVDRIKDIIDLE
KFSYIKIFVTKARSKVLIVNLDSALQNYYYELATRFRNHDYSKVKNISCEVYFKNKNG
KNIKEQIEYALSKEIRFLVFVGQEEYKENKMKVRDLTKKEELLLSFEESINLIKCNEK
LLCTPF"
misc_feature complement(132511..133782)
/gene="hisS"
/locus_tag="BbuZS7_0135"
/note="histidyl-tRNA synthetase; Region: hisS; TIGR00442"
/db_xref="CDD:200014"
misc_feature complement(132796..133746)
/gene="hisS"
/locus_tag="BbuZS7_0135"
/note="Class II Histidinyl-tRNA synthetase (HisRS)-like
catalytic core domain. HisRS is a homodimer. It is
responsible for the attachment of histidine to the 3' OH
group of ribose of the appropriate tRNA. This domain is
primarily responsible for ATP-dependent...; Region:
HisRS-like_core; cd00773"
/db_xref="CDD:73226"
misc_feature complement(order(132832..132837,132895..132897,
133369..133371,133378..133380,133390..133392,
133414..133416,133435..133440,133522..133527,
133534..133539,133552..133554,133558..133560,
133594..133599,133660..133680,133693..133695,
133729..133731))
/gene="hisS"
/locus_tag="BbuZS7_0135"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:73226"
misc_feature complement(133660..133686)
/gene="hisS"
/locus_tag="BbuZS7_0135"
/note="motif 1; other site"
/db_xref="CDD:73226"
misc_feature complement(order(132814..132816,132823..132825,
132832..132834,132895..132897,132910..132912,
132958..132963,132967..132969,132973..132975,
133414..133416,133426..133428,133432..133434,
133441..133443,133462..133464,133468..133470,
133552..133554,133558..133560))
/gene="hisS"
/locus_tag="BbuZS7_0135"
/note="active site"
/db_xref="CDD:73226"
misc_feature complement(133459..133473)
/gene="hisS"
/locus_tag="BbuZS7_0135"
/note="motif 2; other site"
/db_xref="CDD:73226"
misc_feature complement(order(132814..132816,132823..132837))
/gene="hisS"
/locus_tag="BbuZS7_0135"
/note="motif 3; other site"
/db_xref="CDD:73226"
misc_feature complement(<132511..132753)
/gene="hisS"
/locus_tag="BbuZS7_0135"
/note="HisRS Histidyl-anticodon binding domain. HisRS
belongs to class II aminoacyl-tRNA synthetases (aaRS).
This alignment contains the anticodon binding domain,
which is responsible for specificity in tRNA-binding, so
that the activated amino acid is...; Region:
HisRS_anticodon; cd00859"
/db_xref="CDD:29799"
misc_feature complement(order(132514..132516,132520..132522,
132550..132552,132574..132576,132592..132594,
132724..132729))
/gene="hisS"
/locus_tag="BbuZS7_0135"
/note="anticodon binding site; other site"
/db_xref="CDD:29799"
gene 133924..135813
/locus_tag="BbuZS7_0136"
/db_xref="GeneID:7106854"
CDS 133924..135813
/locus_tag="BbuZS7_0136"
/note="identified by match to protein family HMM PF00905;
match to protein family HMM PF03717; match to protein
family HMM PF03793"
/codon_start=1
/transl_table=11
/product="penicillin-binding protein"
/protein_id="YP_002374664.1"
/db_xref="GI:218249585"
/db_xref="GeneID:7106854"
/translation="MTKRMLNNTYRIKTILTIFLAITLLTIYKYFTLMAFNNSPDNTI
SLKSNDIAKRGTIYDRNGKPIAFSSKSYSIGTNPQKIENIVSTSETLGAILQINSRIL
KEKLSSNKGFLYIKRKIKREESDLIKRIQAEGRLSNITLYPDYTRIYPFRNTTSNITG
FVGTDNLGLEGIEFSLNSILGKDKTKQQFLNEEPETNNIHLTIDMDIQQGVSKIAKKY
FKENNPESLITLVMNSQNGEILSMVQFPQYDANFYSKYPEEIRKNLSSSLTYEPGSIN
KIFTVAIILESGKLNLEEKFLDNGIYQKQFPSGETITIKTLNPPYKHIDSTEILIYSS
NVGIAYITEKVSNEYFYKKLLDFGFGEKVGVPFPGETKGLLNHYSKWSGRSKATIGFG
QEIGVSAIQILQAASILGNNGIMLKPRIIKKISNDKGENIKEFDKEEIRKVISKNSAQ
KVLKMMREVVNKGGIPNLKIKNLDISAKSGTSQAIDRKTGKYSEEDYTSSILAIYPTE
QPKYIIYIVYRYPKKIIYGTRIAAPMAKEIIEFIEHQQNTIAYKKIKMPSKIKIPKAE
TNYKNKTYLPNFINLSKREAIDILKYYKNTMKIKINGDGFVYKQSKSPNTKLEDITEL
ELYLK"
misc_feature 134005..135567
/locus_tag="BbuZS7_0136"
/note="Cell division protein FtsI/penicillin-binding
protein 2 [Cell envelope biogenesis, outer membrane];
Region: FtsI; COG0768"
/db_xref="CDD:31111"
misc_feature 134077..134484
/locus_tag="BbuZS7_0136"
/note="Penicillin-binding Protein dimerisation domain;
Region: PBP_dimer; pfam03717"
/db_xref="CDD:202738"
misc_feature 134608..135543
/locus_tag="BbuZS7_0136"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; pfam00905"
/db_xref="CDD:144486"
misc_feature 135643..135810
/locus_tag="BbuZS7_0136"
/note="PASTA domain of PBP2x-like proteins, second repeat.
Penicillin-binding proteins (PBPs) are the major targets
for beta-lactam antibiotics, like penicillins and
cephalosporins. Beta-lactam antibiotics specifically
inhibit transpeptidase activity by...; Region:
PASTA_Pbp2x-like_2; cd06575"
/db_xref="CDD:119326"
gene complement(135823..137715)
/locus_tag="BbuZS7_0137"
/db_xref="GeneID:7106836"
CDS complement(135823..137715)
/locus_tag="BbuZS7_0137"
/note="identified by match to protein family HMM PF00501"
/codon_start=1
/transl_table=11
/product="long-chain-fatty-acid CoA ligase"
/protein_id="YP_002374665.1"
/db_xref="GI:218249890"
/db_xref="GeneID:7106836"
/translation="MSIAKAFFEVADQQKDKIAQMYKVCNGYAHVTYGDLKNNVLKLA
SFLKSINVKHQDKIFICSENRAEWTVIDFAILSLGAVDIPKGSDVTLFEAEIIFNSVL
PSVVILENLNLLNMFIQIKFTVKPIFIIIENLNQEDRLKYSDFEIYTYSDCILFGDTL
RKDSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTHVGQ
IFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHYIAAVPRLWIA
IRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGLYPDNGFSLFFPIKKILGI
FGLICAFPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAVRFFNSIGIELANAY
GLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPGKGILFVKGPQVML
GYYKDKEATCKIIGSDGFLNTGDIAKLSKDNVVQIIGREKDTIVLNNGENVEPAPIEI
KLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQIIANNIV
LKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEVGKEMSIKMDIKRSYILNFYKNE
IKNLFI"
misc_feature complement(135829..137715)
/locus_tag="BbuZS7_0137"
/note="Long-chain acyl-CoA synthetases (AMP-forming)
[Lipid metabolism]; Region: FAA1; COG1022"
/db_xref="CDD:31225"
misc_feature complement(<136828..137622)
/locus_tag="BbuZS7_0137"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
misc_feature complement(136153..>136617)
/locus_tag="BbuZS7_0137"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
gene complement(137829..138038)
/locus_tag="BbuZS7_0138"
/db_xref="GeneID:7106349"
CDS complement(137829..138038)
/locus_tag="BbuZS7_0138"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374666.1"
/db_xref="GI:218249836"
/db_xref="GeneID:7106349"
/translation="MTDCFKGDKIDPKHCYYICENNWIIFNALVILKKILLAKILKLK
FTSRFSIIFLLKYFFKLCFDFLGFY"
gene complement(138129..138440)
/locus_tag="BbuZS7_0139"
/db_xref="GeneID:7106216"
CDS complement(138129..138440)
/locus_tag="BbuZS7_0139"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374667.1"
/db_xref="GI:218249347"
/db_xref="GeneID:7106216"
/translation="MTKFYNYRIEIVSNLSLELDVFECIEKIEQELGESIYYSKIGNV
YGKGKKGEKHGNGVWPEENFILIIYTSNQSIVERLKDIVDDLNRSYPTEGINLFVLRN
F"
gene complement(138442..141657)
/locus_tag="BbuZS7_0140"
/db_xref="GeneID:7106644"
CDS complement(138442..141657)
/locus_tag="BbuZS7_0140"
/note="identified by match to protein family HMM PF00873"
/codon_start=1
/transl_table=11
/product="acriflavine resistance protein"
/protein_id="YP_002374668.1"
/db_xref="GI:218249287"
/db_xref="GeneID:7106644"
/translation="MLVKRIVGKPITMLILFSLLLMISLYTFSRLKVDLLPGIDIPQI
SIHTVYPGASPREVEESVSRVLESGLSSVKNLKNIYSVSSKESSTVSLEFYHGTDLDL
VLNEIRDALELVKSSLPSKSQTPRIFRYNLKNIPVMEIVINSVRPVSELKRYADEIIK
PGLERLDGVAIVTVNGGSKKRVLIEVSQNRLESYGLSLSRISSIIASQNLELSAGNIL
ENNLEYLVEVSGKFKSIEEIGNVVIAYKIPDISSGINLSPIEIKLKDIANIKTDFEDL
SEYVEYNGLPSISLSVQKRSDANSIAVSNVVINEIEKLKLSMPKDMKLEIASDSTDFI
KASISTVVNSAYFGAMLAIFVIFFFLRSFRATIIIGISIPIAIVLTFFLMYFANISLN
IMSLAGLALGIGMVVDCSIVVIDNIYKYRQKGAKLISSSILGAQEMMLPITSSTFTSI
CVFGPFLIFKSELGVYGDFFKDFTFTIVISLGVSLLVAIFLVPVLSSHYVGLYTSFQK
NIKNAFIRKIDAFFASIYYFLEFLYINLLNIVLNHKLIFGLIVFFSFIGSLLLGLLLD
VTTFTRGKENSITINLNFPHKTNLEYAKFYSNRFLEIVKSEAKGYKSIIATLRADRIT
FNVLFPLKEESRDKLTQSVDYDSIKYKIMNRIGNLYPEFNIEPSISGNALGGGDSIKI
KISANDFEYIKDYGKILVSMLKKEIPELVNPRLSISDFQLQIGVEIDRALVYNYGIDM
NTILNELKSNINGVVAGQYVEKGLNYDIVLKLDRMDVKNLKDLEKIFITNSSGVKIPF
SSIATFEKTNKAESIYRENQALTIYLNAGISPDDNLTQVTAKVVDFINNKVPHKEGIT
LKVEGEYNEFSNIMNQFKIIIMMAIIVVFGIMASQFESFLKPFIIIFTIPLTAIGVVL
IHFLAGEKLSIFAAIGMLMLVGVVVNTGIVLVDYTGLLIKRGFGLREAIIESCRSRLR
PILMSSLTSIIGLIPMAFSSGSGNELLKPIAFTFIGGMTASTFLTLFFIPMLFEIFSN
IVSSFKSRLKRVTSNLDVEKSFKINNSTKSSYDDLFEEDGE"
misc_feature complement(138565..141657)
/locus_tag="BbuZS7_0140"
/note="Cation/multidrug efflux pump [Defense mechanisms];
Region: AcrB; COG0841"
/db_xref="CDD:31183"
gene complement(141676..142629)
/locus_tag="BbuZS7_0141"
/db_xref="GeneID:7106497"
CDS complement(141676..142629)
/locus_tag="BbuZS7_0141"
/note="identified by match to protein family HMM
TIGR01730"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374669.1"
/db_xref="GI:218249197"
/db_xref="GeneID:7106497"
/translation="MNLIFNINLYLKKYFLVLFLVLVACVGDNKLDDKNIDKEKESSY
RFPVIAMKVKKGILSDYLSLNGDVDTKVKADIFPDAVGKITSLRIKLGAYVQKGQIVA
TLDPSRPGSVYLKSPVRAPISGYILNITKKIGETVNPQSNIAVVGRIDTKQILTYVSE
KYISNIKVGNDAIIEVGAYSNEKFKAKVSEISPILDSKSRTIEVYLTPIGSNLDKLII
GMFSKIKLITKRFKDVIKISREAVVEREGKKFVFKVDLESKSVQMLPITVLFEIDNIV
ALSGEVEENDLIVVEGMSALSNGSLINLVDTKEGLSAESNI"
misc_feature complement(<142270..142491)
/locus_tag="BbuZS7_0141"
/note="Membrane-fusion protein [Cell envelope biogenesis,
outer membrane]; Region: AcrA; COG0845"
/db_xref="CDD:31186"
misc_feature complement(<142306..142407)
/locus_tag="BbuZS7_0141"
/note="Biotinyl_lipoyl_domains are present in
biotin-dependent carboxylases/decarboxylases, the
dihydrolipoyl acyltransferase component (E2) of 2-oxo acid
dehydrogenases, and the H-protein of the glycine cleavage
system (GCS). These domains transport CO2, acyl; Region:
Biotinyl_lipoyl_domains; cl11404"
/db_xref="CDD:213122"
misc_feature complement(142291..142293)
/locus_tag="BbuZS7_0141"
/note="lipoyl-biotinyl attachment site [posttranslational
modification]; other site"
/db_xref="CDD:133456"
misc_feature complement(141973..142278)
/locus_tag="BbuZS7_0141"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene complement(142641..143963)
/locus_tag="BbuZS7_0142"
/db_xref="GeneID:7106736"
CDS complement(142641..143963)
/locus_tag="BbuZS7_0142"
/note="identified by match to protein family HMM PF02321"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374670.1"
/db_xref="GI:218249697"
/db_xref="GeneID:7106736"
/translation="MKILIKFYNFKVLIFIIRGLQIKKIFLIFMTVSFSFAEIIQISP
KQAVNMALENSLDSENALYKENIKKLYKNNAWNVFVPNVNLSSTLSRNPSALSELERD
YWGFGFGVGINLSLSPSVLKRMQLVMLEYESAKIERESAVRNIKLNVLKSYNQLIALK
STLKVFESQIQNSKLKFEQARIAYNNGLISEIDFLDAQLKYKKFQPDLDGHIINFEKS
KEIFKLLIGLDHDQDFEIIGELPDETIDFSLFNEALNFNKSLEIKDLNMRLKMTEQLI
DSLWLDTYLPSLSLSFSYSPYKSFHENSKGFSTGFLASFSLNYGLTEIFPFSKSFTKI
QDNNYQLKILQNNVEGKIRNLKSSIVQKRKDIRRYKAILDASKINVELANKNYQMAFN
AFNSGVMDLSKLNDIELVYKQSDLKFIEDKLNYANSILEYKNLINSLD"
misc_feature complement(143283..143834)
/locus_tag="BbuZS7_0142"
/note="Outer membrane efflux protein; Region: OEP;
pfam02321"
/db_xref="CDD:202204"
gene complement(144063..144251)
/locus_tag="BbuZS7_0143"
/db_xref="GeneID:7106869"
CDS complement(144063..144251)
/locus_tag="BbuZS7_0143"
/note="identified by glimmer"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374671.1"
/db_xref="GI:218249520"
/db_xref="GeneID:7106869"
/translation="MGLYLGVKSFPPLNNALHRIILSVINIKAVKKLYFLRHSIEYFE
QVGLYMHCSPNILDKVFW"
gene complement(144283..145155)
/locus_tag="BbuZS7_0144"
/db_xref="GeneID:7106597"
CDS complement(144283..145155)
/locus_tag="BbuZS7_0144"
/note="identified by match to protein family HMM PF04069"
/codon_start=1
/transl_table=11
/product="glycine/betaine ABC transporter
substrate-binding protein"
/protein_id="YP_002374672.1"
/db_xref="GI:218249260"
/db_xref="GeneID:7106597"
/translation="MYKLFLFFIIFMFLSCDEKKSSKNLKSVKIGYVNWGGETAATNV
LKVVFEKMGYNAEIFSVTTSIMYQYLASGKIDGTVSSWVPTADKFYYEKLKTKFVDLG
ANYEGTIQGFVVPSYVPISSISELKGKGDKFKNKMIGIDAGAGTQIVTEQALNYYGLS
KEYELVPSSESVMLASLDSSIKRNEWILVPLWKPHWAFSRYDIKFLDDPDLIMGGIES
VHTLVRLGLENDDFDAYYVFDHFYWSDDLILPLIDKNDKEPGKEYRNAVEFVEKNKEI
VKTWVPEKYKTLFD"
misc_feature complement(144289..145080)
/locus_tag="BbuZS7_0144"
/note="ABC-type proline/glycine betaine transport systems,
periplasmic components [Amino acid transport and
metabolism]; Region: ProX; COG2113"
/db_xref="CDD:32296"
misc_feature complement(144340..145080)
/locus_tag="BbuZS7_0144"
/note="Substrate binding domain of ABC-type glycine
betaine transport system; Region: OpuAC; pfam04069"
/db_xref="CDD:202876"
gene complement(145168..146067)
/locus_tag="BbuZS7_0145"
/db_xref="GeneID:7106469"
CDS complement(145168..146067)
/locus_tag="BbuZS7_0145"
/note="identified by match to protein family HMM PF00528"
/codon_start=1
/transl_table=11
/product="glycine/betaine ABC transporter permease"
/protein_id="YP_002374673.1"
/db_xref="GI:218249326"
/db_xref="GeneID:7106469"
/translation="MTKDFFILKIDNFFDFLVDNFSISDGVGFSKSIIFLYENLKNLF
LFVNPLLFILTVCLLSFVFLKKRLIFLILPGFFFILYFNLWEASMDTIAIIFVSVLVS
VILGIPIGILGGYFPRFYVFLKPILDLMQAMPPFIYLIPAIPFFGMGTASAIFATIVF
AMPPVIRYTRLGIVQVSDEVIEAAKSFGSSNLRILFQVQLPLSLQSIIEGINQSIMMA
ISMIVIAAMVGSSGLGRTVIYSIERLNFGEGLISGLAVVIIAIILDRIMQSIFIKFSY
LNTDHYGGKKENKFKRFLEIYNK"
misc_feature complement(145279..145725)
/locus_tag="BbuZS7_0145"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(145279..145284,145291..145296,
145300..145305,145312..145317,145345..145350,
145387..145392,145399..145410,145429..145431,
145438..145443,145483..145485,145534..145536,
145543..145548,145558..145560,145564..145569,
145576..145578,145582..145584,145588..145593,
145639..145641,145645..145650,145657..145686,
145690..145701))
/locus_tag="BbuZS7_0145"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(145393..145410,145639..145683))
/locus_tag="BbuZS7_0145"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(145315..145317,145345..145347,
145354..145356,145390..145392,145606..145608,
145639..145641))
/locus_tag="BbuZS7_0145"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(145462..145464,145474..145479,
145495..145533))
/locus_tag="BbuZS7_0145"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(146074..147192)
/locus_tag="BbuZS7_0146"
/db_xref="GeneID:7106620"
CDS complement(146074..147192)
/locus_tag="BbuZS7_0146"
/note="identified by match to protein family HMM PF00005"
/codon_start=1
/transl_table=11
/product="glycine/betaine ABC transporter ATP-binding
protein"
/protein_id="YP_002374674.1"
/db_xref="GI:218249198"
/db_xref="GeneID:7106620"
/translation="MSRVAVKIKDCYKVFSYYVNKKQISRAIKDYEDGKDRMQIYKES
SIFIANANINLDVYENEILVIMGMSGCGKSTLVRCLNGIYKIDSGSILVNNMEMNAIN
RKDLSNLRKDKFAMVFQNFGLFPHMNVLRNVTYGLEVKHIPRKIREERAIEVLNLVGL
EDSKYKYINELSGGMKQRVGIARALVVNPDILLMDEAFSALDPLIKGEMQEELLRLVA
KLKKTVVFITHDLNEAFKLGHRIAFMRDGKIIQVGKPLEILANPSTDFISDFIKNLPV
LNILKIKDILKDDFDLNSGGDNGLNVIIKCQGENFSLYDKALNKRYDNLVSLNLDLND
EIKKIVEYLNKQDYLIIKEKGTVVGYISLNEISYLLSR"
misc_feature complement(146077..147189)
/locus_tag="BbuZS7_0146"
/note="ABC-type proline/glycine betaine transport system,
ATPase component [Amino acid transport and metabolism];
Region: ProV; COG4175"
/db_xref="CDD:33915"
misc_feature complement(146359..147177)
/locus_tag="BbuZS7_0146"
/note="This family comprises the glycine betaine/L-proline
ATP binding subunit in bacteria and its equivalents in
archaea. This transport system belong to the larger
ATP-Binding Cassette (ABC) transporter superfamily. The
characteristic feature of these...; Region:
ABC_Pro_Gly_Bertaine; cd03294"
/db_xref="CDD:73053"
misc_feature complement(146971..146994)
/locus_tag="BbuZS7_0146"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73053"
misc_feature complement(order(146506..146508,146605..146610,
146836..146838,146968..146976,146980..146985))
/locus_tag="BbuZS7_0146"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73053"
misc_feature complement(146836..146847)
/locus_tag="BbuZS7_0146"
/note="Q-loop/lid; other site"
/db_xref="CDD:73053"
misc_feature complement(146653..146682)
/locus_tag="BbuZS7_0146"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73053"
misc_feature complement(146605..146622)
/locus_tag="BbuZS7_0146"
/note="Walker B; other site"
/db_xref="CDD:73053"
misc_feature complement(146587..146598)
/locus_tag="BbuZS7_0146"
/note="D-loop; other site"
/db_xref="CDD:73053"
misc_feature complement(146500..146520)
/locus_tag="BbuZS7_0146"
/note="H-loop/switch region; other site"
/db_xref="CDD:73053"
gene complement(147346..148356)
/locus_tag="BbuZS7_0147"
/db_xref="GeneID:7106737"
CDS complement(147346..148356)
/locus_tag="BbuZS7_0147"
/note="structural flagella protein"
/codon_start=1
/transl_table=11
/product="flagellin"
/protein_id="YP_002374675.1"
/db_xref="GI:218249451"
/db_xref="GeneID:7106737"
/translation="MIINHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAA
GMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTY
SDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEELGMQPAKINT
PASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQAAPVQEGVQQE
GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLES
IKDSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSAMAMIAQANQVPQYVLSL
LR"
misc_feature complement(147349..148356)
/locus_tag="BbuZS7_0147"
/note="flagellin; Provisional; Region: PRK12803"
/db_xref="CDD:183758"
misc_feature complement(147943..148350)
/locus_tag="BbuZS7_0147"
/note="Bacterial flagellin N-terminal helical region;
Region: Flagellin_N; pfam00669"
/db_xref="CDD:144315"
misc_feature complement(147352..147609)
/locus_tag="BbuZS7_0147"
/note="Bacterial flagellin C-terminal helical region;
Region: Flagellin_C; pfam00700"
/db_xref="CDD:144340"
gene complement(148483..150480)
/gene="fliD"
/locus_tag="BbuZS7_0148"
/db_xref="GeneID:7106445"
CDS complement(148483..150480)
/gene="fliD"
/locus_tag="BbuZS7_0148"
/note="involved in flagellin assembly"
/codon_start=1
/transl_table=11
/product="flagellar hook-associated protein FliD"
/protein_id="YP_002374676.1"
/db_xref="GI:218249809"
/db_xref="GeneID:7106445"
/translation="MASGFFVPGLESKYNTKEIRESMLKSDKAKIDSSFKKLESLEQE
KSAWQLINRKISTLNSLAKELTSLNSPFNLMSGNSSNSEVLTLSTRYGSKNETHKLII
DQIASADVFLSSNFDPKKVTIPEGDYIFLVGKKEINVKSNGNIDLLVKDINNKGKGFL
SAKIVKSDKNGNSRFVLQSLKEGKENKLVIKGEGLSFAKQIGILSELKTNFNPNLSDI
VVNQSSSNNKLAFENNGLVLNPLSEVSIEIPEDIEITSRSKIKFEVKYFDTGLEEPDS
KIIFNPGGATFKDAKVESEDSVVDLGSDLKTPLEKKYIQMNMVKICSKEGSLELPLIN
ISNNFEEVEVDVGALSNLEEINIENKANNKVIVISNVEIFDPKNRDGHLPINAKSFAE
NAKIKFDGVDVERDSNVINDLVPNVTLSLKKASSDMVEAKIEPDYEGIKRVLLDFIGA
YNEVLAEINIVSSNEDQPNNQKSNIVEELTYLSDSQKEEAYKNLGILRSEFLLKNLKS
KLESIIFKPYVTSDPNFSIINQMGVFTNSISSSGGLSRYLRLDEKKFDESIRNNIDNV
RELFLYDLNGDRVYDNGIAKMLGDCLSPLVASGGVIYNKIKNYDLKIFNQKNKVEDYK
KKYEDRERKVEGELNTLDFTVKRMKDQENTLKAFDFNQRNK"
misc_feature complement(148486..150477)
/gene="fliD"
/locus_tag="BbuZS7_0148"
/note="flagellar hook-associated protein FliD; Validated;
Region: fliD; PRK06664"
/db_xref="CDD:180649"
misc_feature complement(150151..150447)
/gene="fliD"
/locus_tag="BbuZS7_0148"
/note="Flagellar hook-associated protein 2 C-terminus;
Region: FliD_N; pfam02465"
/db_xref="CDD:202247"
misc_feature complement(148534..149310)
/gene="fliD"
/locus_tag="BbuZS7_0148"
/note="Flagellar hook-associated protein 2 C-terminus;
Region: FliD_C; pfam07195"
/db_xref="CDD:115824"
gene 150669..151874
/gene="nagA"
/locus_tag="BbuZS7_0149"
/db_xref="GeneID:7106188"
CDS 150669..151874
/gene="nagA"
/locus_tag="BbuZS7_0149"
/EC_number="3.5.1.25"
/note="identified by match to protein family HMM PF01979;
match to protein family HMM TIGR00221"
/codon_start=1
/transl_table=11
/product="N-acetylglucosamine-6-phosphate deacetylase"
/protein_id="YP_002374677.1"
/db_xref="GI:218249218"
/db_xref="GeneID:7106188"
/translation="MPNFCLFNSKSVLTGNDKIDNSAVLIKDNKIFDIVTSDRLKKMD
LEEYQMIDTKGNYITPGLYDNHIHGFHGHGTDQRSTESILKMSEHLAQYGVVGFLPTL
YPRPIDEMIETIKACIAAIGKEKGAKILGLHLEGPFFSPEKKGAHPVSYLHEPSIEVM
QKLIDAAGGVFTGSNGKRKTHISTMTVAPELKGMRELAIFCLENNINLQAGHTNATYE
NMIEGFQVGILHTTHFFNAMSKLDHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLILM
LRKLKDISKIVLVTDGLTPNCQTCGKLIANGDEVYIAEDGLFHSVKSNTIAGSTLTMI
QGLKNLIEFGFSLSDAVQASSYNPTRILNIDKKGLICHGYDANLNVLDKDFNLKLTMI
ESKIIFNNL"
misc_feature 150669..151853
/gene="nagA"
/locus_tag="BbuZS7_0149"
/note="N-acetylglucosamine-6-phosphate deacetylase;
Region: nagA; TIGR00221"
/db_xref="CDD:161772"
misc_feature 150681..151847
/gene="nagA"
/locus_tag="BbuZS7_0149"
/note="N-acetylglucosamine-6-phosphate deacetylase, NagA,
catalyzes the hydrolysis of the N-acetyl group of
N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to
glucosamine 6-phosphate and acetate. This is the first
committed step in the biosynthetic pathway to...; Region:
NagA; cd00854"
/db_xref="CDD:30034"
misc_feature order(150864..150866,150870..150872,151071..151073,
151104..151106,151302..151304,151365..151367,
151374..151379,151470..151472,151539..151541,
151644..151646)
/gene="nagA"
/locus_tag="BbuZS7_0149"
/note="active site"
/db_xref="CDD:30034"
misc_feature order(151371..151373,151389..151391,151395..151400,
151404..151406,151425..151430,151467..151478,
151482..151487,151491..151496,151503..151505)
/gene="nagA"
/locus_tag="BbuZS7_0149"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:30034"
gene 151901..152707
/gene="nagB"
/locus_tag="BbuZS7_0150"
/db_xref="GeneID:7106759"
CDS 151901..152707
/gene="nagB"
/locus_tag="BbuZS7_0150"
/EC_number="3.5.99.6"
/note="catalyzes the reversible formation of fructose
6-phosphate from glucosamine 6-phosphate"
/codon_start=1
/transl_table=11
/product="glucosamine-6-phosphate deaminase"
/protein_id="YP_002374678.1"
/db_xref="GI:218249597"
/db_xref="GeneID:7106759"
/translation="MRLIIRPTYEDISKWAANHVAQKINEFSPTKENPFILGLPTGSS
PIGMYKNLIELNKNKKISFQNVITFNMDEYIGIEENHPESYHSFMWNNFFSHIDIKKE
NINILNGNASNLKKECEEYEKKIKSFGGIMLFVGGIGPDGHIAFNEPGSSLTSRTRIK
TLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEK
GVNHMWTISALQLHKNAIIVSDKNATYELKVGTVEYFNDIERKNFNNDLK"
misc_feature 151928..152641
/gene="nagB"
/locus_tag="BbuZS7_0150"
/note="GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P)
deaminase subfamily; GlcN6P deaminase catalyzes the
reversible conversion of GlcN6P to D-fructose-6-phosphate
(Fru6P) and ammonium. The reaction is an aldo-keto
isomerization coupled with an amination or...; Region:
GlcN6P_deaminase; cd01399"
/db_xref="CDD:73165"
misc_feature order(152021..152032,152111..152116,152309..152314,
152327..152329,152333..152335,152414..152416,
152522..152524)
/gene="nagB"
/locus_tag="BbuZS7_0150"
/note="active site"
/db_xref="CDD:73165"
misc_feature order(152348..152350,152354..152359,152381..152383,
152546..152566,152588..152596)
/gene="nagB"
/locus_tag="BbuZS7_0150"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:73165"
misc_feature order(152351..152356,152372..152383)
/gene="nagB"
/locus_tag="BbuZS7_0150"
/note="allosteric site; other site"
/db_xref="CDD:73165"
misc_feature order(152387..152389,152396..152428,152438..152446)
/gene="nagB"
/locus_tag="BbuZS7_0150"
/note="active site lid [active]"
/db_xref="CDD:73165"
misc_feature order(152402..152404,152516..152518,152528..152530,
152621..152623,152630..152641)
/gene="nagB"
/locus_tag="BbuZS7_0150"
/note="hexamer (dimer of trimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:73165"
gene complement(152770..153381)
/locus_tag="BbuZS7_0151"
/db_xref="GeneID:7106848"
CDS complement(152770..153381)
/locus_tag="BbuZS7_0151"
/EC_number="1.15.1.1"
/note="identified by match to protein family HMM PF00081;
match to protein family HMM PF02777"
/codon_start=1
/transl_table=11
/product="superoxide dismutase"
/protein_id="YP_002374679.1"
/db_xref="GI:218249834"
/db_xref="GeneID:7106848"
/translation="MFKLPELGYDYDAVEPYIDAKTMEIHHSKHHNGFVMNLNSILEK
MGKIHLTDVSNILKNIHDFPEEFQTLIRNNAGGYSNHTLYFRTLRPGNKDNLFEKFKD
DINAAFGSLDVLKANLKDTAMKIFGSGWAWLVLCPESGLKVISMPNQDSPLMNSYKPI
LGIDVWEHAYYLKYQNRRIEYVDAFLKALNWEEVSKVYNEVIN"
misc_feature complement(152773..153381)
/locus_tag="BbuZS7_0151"
/note="Superoxide dismutase [Inorganic ion transport and
metabolism]; Region: SodA; COG0605"
/db_xref="CDD:30950"
misc_feature complement(153115..153378)
/locus_tag="BbuZS7_0151"
/note="Iron/manganese superoxide dismutases, alpha-hairpin
domain; Region: Sod_Fe_N; pfam00081"
/db_xref="CDD:200985"
misc_feature complement(152788..153087)
/locus_tag="BbuZS7_0151"
/note="Iron/manganese superoxide dismutases, C-terminal
domain; Region: Sod_Fe_C; pfam02777"
/db_xref="CDD:202388"
gene complement(153396..156095)
/gene="secA"
/locus_tag="BbuZS7_0152"
/db_xref="GeneID:7106214"
CDS complement(153396..156095)
/gene="secA"
/locus_tag="BbuZS7_0152"
/note="functions in protein export; can interact with
acidic membrane phospholipids and the SecYEG protein
complex; binds to preproteins; binds to ATP and undergoes
a conformational change to promote membrane insertion of
SecA/bound preprotein; ATP hydrolysis appears to drive
release of the preprotein from SecA and deinsertion of
SecA from the membrane; additional proteins SecD/F/YajC
aid SecA recycling; exists in an equilibrium between
monomers and dimers; may possibly form higher order
oligomers; proteins in this cluster correspond SecA1;
SecA2 is not essential and seems to play a role in
secretion of a subset of proteins"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecA"
/protein_id="YP_002374680.1"
/db_xref="GI:218249406"
/db_xref="GeneID:7106214"
/translation="MLKAVLETTIGSKSKRDLKDYLPTLRNINKLERWALLLADEDFS
KETEKLKDELKSGNSLENILERAFTLSREAARRRLKERPYDVQIIAGLALHKGKIIEM
KTGEGKTLSSVQAAYLNSLTGDGVIIVTVNDYLAERDSNWMKPVFDLLGVSVGVVLSN
MDYELRKAQYAKDITYVTNNELGFDYLRDNMRYDLNEKSLRKFNYCIIDEIDSILIDE
ARTPLIISGPTEGNTNAYLEVNSLVSFLKECSKDPKTGDYPLEIDDLDGDYTVDEKAK
RISFTAKGLNNLEQLLVSKGIISGSMYTDSNFNYVHYMTQALKAHLLFLKNREYIVGD
SGVEIVDEFTGRVLTGRRYSDGLHQAIEAKEGVRVANENKTMATITFQNLFRMFDKIS
GMTGTADTEAKEFHKIYNLDVVVVPTNRLLARIDEDDTIYYTEEFKFNAITDEVYKTY
KKGQPVLVGTVSIEKSEILSAMFKSRGIKHEVLNAKNHSREAFIIAEAGAKHAVTIAT
NMAGRGTDIKLGGNIEHRVRKKIGTNVSLEEFQEAVKNERENYLKDYNEVKSLGGLYV
IGSERHESRRIDNQLRGRSGRQGDPGRSRFYVSLEDDLMRLFAGDNLRSLMGKLGMAT
GEPITHSLLTKSLINAQKRVEDRNFEIRKHLLEYDDVITKQRDFIYAQRNSILKDTAI
KDRILVALEEYLSFLLEGTKSSTVSNVFLNEVNSIFAYMLESLGSIENISYLDLKAKL
MQIAKANLDEKENLIGRDLFNGFLRYEYLKNIDFKFQEHLANLDSLREAVYLRSYANK
NPITEYKEEGFSIFSELIKDIKVSTIRRVLQLKLDSNSSDFKSTKKSRNVKPIHKELS
GIVINENKSASNVQVVRSSPKIGRNEPCYCGSGKKYKNCHGKS"
misc_feature complement(153399..156095)
/gene="secA"
/locus_tag="BbuZS7_0152"
/note="preprotein translocase subunit SecA; Reviewed;
Region: PRK12904"
/db_xref="CDD:183826"
misc_feature complement(155010..155414)
/gene="secA"
/locus_tag="BbuZS7_0152"
/note="SecA preprotein cross-linking domain; Region:
SecA_PP_bind; smart00958"
/db_xref="CDD:198026"
misc_feature complement(153402..153458)
/gene="secA"
/locus_tag="BbuZS7_0152"
/note="SEC-C motif; Region: SEC-C; pfam02810"
/db_xref="CDD:202406"
gene complement(156169..156327)
/locus_tag="BbuZS7_0154"
/db_xref="GeneID:7106400"
CDS complement(156169..156327)
/locus_tag="BbuZS7_0154"
/note="identified by glimmer"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374681.1"
/db_xref="GI:218249864"
/db_xref="GeneID:7106400"
/translation="MSNFEFVNLLFRGIIAPGSVPNGILNCSSPNSFKVLVLHDIIAK
SRLNMRAL"
gene 156287..157294
/locus_tag="BbuZS7_0153"
/db_xref="GeneID:7106324"
CDS 156287..157294
/locus_tag="BbuZS7_0153"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_002374682.1"
/db_xref="GI:218249302"
/db_xref="GeneID:7106324"
/translation="MPLNNKFTNSKFDIKTYNGLVYIAEIKTNKLMIFNSYGKLIQTY
QNGIFKTNPDLKIKKIDFEGIQAIYPLKDFIIVADKLNNKKSKFNQKENIAYFMRILI
LNKNSSVEILGQEGLNGMPFPQIYDVNVDENGNIAIISIYSEGYIIYSYNKEFSPLYK
IYVNKNLLKTIDNQKKKYNISIDKVFFEVNKKTLYVKTTYYENIGDNENINDLGIKIK
DQYIYKMSLKKNKELEVINKIALPKNLLDDKQESFINIIKIQKDKIIASTNMKNLSNN
LIWKLDSKGSIKEQIALIEPPNLMFLSESLSKDGILSILYGGKTGVSVYWWNLNALLK
L"
gene 157323..157757
/locus_tag="BbuZS7_0155"
/db_xref="GeneID:7106512"
CDS 157323..157757
/locus_tag="BbuZS7_0155"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374683.1"
/db_xref="GI:218249234"
/db_xref="GeneID:7106512"
/translation="MKKINCNQKLEIEYQKKMKKHIIIGIIFVAILLFFKILLIPRIQ
NHENNKNNIKMIISYKQDKNRLSLKINIKTKKTSNLGKAKLDIYLDSKLIESNLLYIS
SKNFTTYANIIYQNESLLSIILKSNGNNNVFYSKRIKPRGKI"
gene 157754..158170
/locus_tag="BbuZS7_0156"
/db_xref="GeneID:7106775"
CDS 157754..158170
/locus_tag="BbuZS7_0156"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374684.1"
/db_xref="GI:218249598"
/db_xref="GeneID:7106775"
/translation="MIQIYFMSVSLNILGGIILAFPILIERISFFKIFEDFVNLINDN
KKVKSIFGLLFLITSALEIIKPYKLPIIGNLIPAVSLFLIGFILFLKQKLPTEVQNNK
KYGKFKSILESNQQIIGIISITIGIIHFLAAEIPLL"
gene 158324..159040
/locus_tag="BbuZS7_0157"
/db_xref="GeneID:7106849"
CDS 158324..159040
/locus_tag="BbuZS7_0157"
/codon_start=1
/transl_table=11
/product="S2 lipoprotein"
/protein_id="YP_002374685.1"
/db_xref="GI:218249871"
/db_xref="GeneID:7106849"
/translation="MVFRTYKHLELIMLPMLMLSCAFFKKPQSVHQDSNTGKPISDEK
LHLISGKISNKKLPIINSNHDVTWIKTKAMTILGEDGKEIPEFKNKFGYSYIISPVKM
DGKYSYYASLLILFETTKNGDDEYEIEDVKFVTAGSTLELKNSLLAVENSQEEGYVTA
YPFGILMSDEIKNAFKLTYKNGHWNYMLADLTVKNKLTQETKIYKISLNSKLIIEFLK
EVLKENSILKDIAGDSFEDI"
gene 159064..159750
/locus_tag="BbuZS7_0158"
/db_xref="GeneID:7106331"
CDS 159064..159750
/locus_tag="BbuZS7_0158"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374686.1"
/db_xref="GI:218249541"
/db_xref="GeneID:7106331"
/translation="MSIKKFILTLIILSLAKNSFSENEINIFENENYIVKENIKTEIK
KLKQSFLLASVDVAISQPYIELADLNGEPIKELEGISYSFINVFSKIGSSAIISFDLS
NEASKKYKIIKLEFLSPDKGNFINQLSSLTSGKQQSKKELAKDAYSFGTLRTESLSKT
IAEYYKDNNWYYILAAITVENNINKETEKYEIRINPKIYNDFQKKLRLHFKSNQIKKF
PIPIIEQTTN"
gene 159786..160904
/gene="alr"
/locus_tag="BbuZS7_0159"
/db_xref="GeneID:7106791"
CDS 159786..160904
/gene="alr"
/locus_tag="BbuZS7_0159"
/EC_number="5.1.1.1"
/note="identified by match to protein family HMM PF00842;
match to protein family HMM PF01168; match to protein
family HMM TIGR00492"
/codon_start=1
/transl_table=11
/product="alanine racemase"
/protein_id="YP_002374687.1"
/db_xref="GI:218249176"
/db_xref="GeneID:7106791"
/translation="MYNNKTMGSNKTIIINLNNLEHNLNLIKNKIGEKEIVATLKGDA
YGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILMYIKVDKKEIKNLIKFE
LVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDDALEIATYIQNSKFL
ELEGICSHLPSIENFKTTQKQIEQFLFFLETLKQKNIHPKFVHISNSGHIINYKLNPQ
FNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVIFIKNVKKGEKISYSGIFQAKE
DMKIGIIPIGYFDGIPQNISNDFYFLINNKKCKIRGKVCMNLTIVEIPKDLKVKTGSK
VEIVSEKLSIDEMSKFSKRSHYELLCNIGKYEKRKYLD"
misc_feature 159882..160898
/gene="alr"
/locus_tag="BbuZS7_0159"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme Alanine Racemase; Region: PLPDE_III_AR; cd00430"
/db_xref="CDD:143481"
misc_feature 159888..160898
/gene="alr"
/locus_tag="BbuZS7_0159"
/note="alanine racemase; Region: alr; TIGR00492"
/db_xref="CDD:129583"
misc_feature order(159900..159902,159906..159908,159918..159920,
160038..160040,160179..160181,160200..160202,
160287..160289,160401..160406,160452..160463,
160587..160589,160644..160646,160728..160733,
160851..160853)
/gene="alr"
/locus_tag="BbuZS7_0159"
/note="active site"
/db_xref="CDD:143481"
misc_feature order(159900..159902,159906..159908,159918..159920,
160038..160040,160200..160202,160287..160289,
160401..160406,160452..160463,160851..160853)
/gene="alr"
/locus_tag="BbuZS7_0159"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143481"
misc_feature order(159906..159911,159984..159986,159993..159998,
160107..160112,160194..160205,160287..160289,
160293..160295,160548..160559,160563..160565,
160575..160580,160584..160592,160629..160631,
160644..160646,160662..160664,160734..160739,
160839..160844,160851..160856,160878..160880)
/gene="alr"
/locus_tag="BbuZS7_0159"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143481"
misc_feature order(159906..159908,159918..159920,160200..160202,
160287..160289,160587..160589,160644..160646,
160728..160733,160851..160853)
/gene="alr"
/locus_tag="BbuZS7_0159"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143481"
misc_feature order(159906..159908,160587..160589)
/gene="alr"
/locus_tag="BbuZS7_0159"
/note="catalytic residues [active]"
/db_xref="CDD:143481"
gene complement(160896..162497)
/locus_tag="BbuZS7_0160"
/db_xref="GeneID:7106713"
CDS complement(160896..162497)
/locus_tag="BbuZS7_0160"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374688.1"
/db_xref="GI:218249457"
/db_xref="GeneID:7106713"
/translation="MLFIIFFISAPLFSKEVYYRFADYSVNYSIVGKYEITKEESEEE
YGYKFTYDRNNNLILVDYIGKLSILMPSFFNASQIKIERSKRSERRIFLNRGLAFKNN
NGVYIEHIEYMSDGRIKNIFNYNRSNEMVRDKYDVSYYHFLYDNEREFSVYRFNESGI
QIKDLNNVYFTKISYDHTKFVKTVLYYDENGYIVRSKNGTFGFRLTYDANHNLIKEEY
LDKSAYAVSNPFSVATKIYHYDVDGKVIEILNYDINNNLTPDENNVAIYRYEYYFKDK
DCYYKEYNYDNNNNLTISQNGYAMKKTIFYIQNNEKRIINYSNKINKNYNRDIPTVYE
EKYEIMDNFKGIAIYSYKYDDNFYLIENIFFDKNFNLIADVKGVMIYRYSYDKEGFLI
AQEHFGGDFVNPIDDFEGVSKYKFSYDSNGNMISKKNYSKDGVLVADCNFVFEYLYEY
DKQNRLISQKNFGSLGQLQDDIHGVSVYKYEYNKFGKISKQSNHGPDLRLRDDVGGFS
IYKWIYDSRGNLIDFQKFDSLGNLI"
gene 162574..162741
/locus_tag="BbuZS7_0161"
/db_xref="GeneID:7106533"
CDS 162574..162741
/locus_tag="BbuZS7_0161"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374689.1"
/db_xref="GI:218249483"
/db_xref="GeneID:7106533"
/translation="MAKISKNAQRVGSKELISRWGGKIIMKSKFENGKIKHYAECQTS
KNTARKPRDLF"
gene complement(162768..164516)
/locus_tag="BbuZS7_0162"
/db_xref="GeneID:7106560"
CDS complement(162768..164516)
/locus_tag="BbuZS7_0162"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374690.1"
/db_xref="GI:218249956"
/db_xref="GeneID:7106560"
/translation="MKKLPEIFYMSSKEVDILISQLGISSDTQKSILKTLLSYKKEAI
DYSSFIEEHSVKIRGLKGELDFLFRKLYEVKRGIVTNRIATDGEFLPDSIILTDEASY
DFYYYSIDDLFLKTYIGIELFSSLLTVKNIESSLLVFKNEFITIADSDINYKFFETKS
QLKEILVWKSLIIPSSRALYFIEFVKKIFFNIASNNVVKDVFVRIKGLKLIDYEKTLE
EGKNIIGAISKILSGIIEIKDEVLGKKGITFSKNYFVFLEFLNLFIKNEKDLEELKAI
EAVKIDESLKAIEKTLEFKKGSIDTEEFFGILKVYSEGLNDPENFLLVANMYFFESKI
HDILPKIFQVKENFYLYKPFAYEFFLEEYEKVLKFLNSELRASIFKILSFGDDPSSIF
TEEGLEEVLSRLVSRYIMNEYCLKNKVKFLDLIVSHYRRICKTQSVQVHLKDLIKVEA
AKYFKNSNELLPLYKIYKLDLYSILNAAYKDLSLFKRIVLFLTGKHQSYKEALSRLDF
RAGLNKSGSGLFDSNERVKRQLEKIRKQREEIKEQVRNSFPKKGAAPKQVASKSYTKQ
EQDEAWVKFSDRIQKK"
gene complement(164597..165583)
/locus_tag="BbuZS7_0163"
/db_xref="GeneID:7106262"
CDS complement(164597..165583)
/locus_tag="BbuZS7_0163"
/note="identified by match to protein family HMM PF01699;
match to protein family HMM TIGR00367"
/codon_start=1
/transl_table=11
/product="K+-dependent Na+/Ca+ exchanger"
/protein_id="YP_002374691.1"
/db_xref="GI:218249799"
/db_xref="GeneID:7106262"
/translation="MQHLIQFFYVGFGIFLLYLGGNLLLKSSVGIATYLKVPTLLIGV
TIVSFSTSAPELFTSLVAAFKGKNEIVVSNVIGSNIINMLLALPLAGFFLKIKADFKR
LKLSFMFLFLLMFLLLLLSFDFRSYSFFVTPYNRFSSFSILILFLSYLLLFYKEEKEY
ASLENSFQEGASNLNQSFNFIFFNLLSFAISMYFLYLGSKLLVDGALYIANNVFNVSE
KLIGIILVAFGTSVPELVVSLFAIIRKESDIAFGNIIGSNIFNIGFILASSSFFRPIL
LQDIYILDFSIMVFITLVLFLVVKFKGVFGRGISLIFLLLYFLYNLMLFNFY"
misc_feature complement(164708..165508)
/locus_tag="BbuZS7_0163"
/note="K+-dependent Na+/Ca+ exchanger related-protein;
Region: TIGR00367"
/db_xref="CDD:211572"
misc_feature complement(<165293..165505)
/locus_tag="BbuZS7_0163"
/note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
pfam01699"
/db_xref="CDD:190072"
misc_feature complement(<164708..165004)
/locus_tag="BbuZS7_0163"
/note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
pfam01699"
/db_xref="CDD:190072"
gene complement(165611..167455)
/locus_tag="BbuZS7_0164"
/db_xref="GeneID:7106178"
CDS complement(165611..167455)
/locus_tag="BbuZS7_0164"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374692.1"
/db_xref="GI:218249681"
/db_xref="GeneID:7106178"
/translation="MYMKIFIYWVVIFFFSVFKVFSIYSLTDEEFFKKYSLFFVHKGF
LSKNVNGKITKVQVNGINSRWVYPFYKLVPSRITSIYEDVYSSSSFLTTSNNLYVSYD
YSKNFRKLVGIDKFNSGAYITSSAFSQGDYKRIAIGTAIHGIYLSVNGAISFKNLNRL
IPQIYLGAGYYDIISAIEFSKEETNNLYFSSGVYGDIFLISQKSGFIKKISFPFKKQI
IRILDLSSKNVEKILVRTYDNHFYSYINGQWVFIGKLSLQDQDFFEKSQRMQLAKNKG
SIYLTAYTLRNKKAVDERFKFIKDSGMNAVVIDFKDDNGNLTYSSKLSLPNKLRSVKN
FIDVPYILKKAKELGIYVIARCVVFKDSKLYYYDNFKHALWNKKTNKPWAHLIKKVDS
SGLVKYVQVEHWVDIFSPATWEYNISIAKEIQSFGVDEIQFDYIRFPSDGPVSLAISR
MNKYEMQPVDALESFLIMAREQLYVPISVDIYGYNGWFPTNSIGQNISMLSDYVDVIS
PMFYPSHYTDDFLPSNFYYTKRAYRIYKEGSDRALAFSLDGVVIRPYVQAFLLGKERL
VDDEIYLEYLKFQLKGIKESFGSGFSLWNASNVYYMIKGSLKEYLDSF"
misc_feature complement(165614..166822)
/locus_tag="BbuZS7_0164"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1306"
/db_xref="CDD:31497"
misc_feature complement(165656..166624)
/locus_tag="BbuZS7_0164"
/note="Putative glycosyl hydrolase domain; Region:
DUF4015; pfam13200"
/db_xref="CDD:205381"
gene complement(167575..169095)
/gene="malQ"
/locus_tag="BbuZS7_0165"
/db_xref="GeneID:7106141"
CDS complement(167575..169095)
/gene="malQ"
/locus_tag="BbuZS7_0165"
/EC_number="2.4.1.25"
/note="amylomaltase; acts to release glucose from
maltodextrins"
/codon_start=1
/transl_table=11
/product="4-alpha-glucanotransferase"
/protein_id="YP_002374693.1"
/db_xref="GI:218249640"
/db_xref="GeneID:7106141"
/translation="MKYKKTRINLNLKRKSGILLNISSLPSKYGIGDLGKGAYKFIDF
LFTSSQSYWQMFAYSPIDFTRSPPYSIFSAFAGNVYYIDLEALDKFIDSDLSLLKENE
TRYSDLKKLSFKDKFLKEAALNFINRASADEVRSFEKFKKKSSYWLLDFASFVAFKEY
FFKESKNAFNVLFDRGILKKNEKDLFKLRNILSKEIKVQEVLQYFFFSQFQALKRYAN
DKGIELIMNVPFFIAYDSADVWAYQKYFKLRFDASKDKIAGISPDYFLEQEQAWDSAA
YSWNVLKKFKYEWWAKRIGVLRKYADIIKIDHFRGFVSTWEVSAGESYAFNGLWVKSP
GRDFFNFILNEIKDLKIWVEDFQNDLEDVSRLRDFFNFPGMKIMNLAFDFDSSNQNLP
HNYIKNCIVYTGSGDNDTIREFINSLDDLHKKYIFDYLNTNENFVVWDMIRSAMGSVS
DNVIVPMQDYINLGDKFSANIPKSTLDNCIFRLLESDLDATLSQNISFITRLYGRA"
misc_feature complement(167581..169095)
/gene="malQ"
/locus_tag="BbuZS7_0165"
/note="4-alpha-glucanotransferase; Region: malQ;
TIGR00217"
/db_xref="CDD:129321"
gene 169260..170405
/locus_tag="BbuZS7_0166"
/db_xref="GeneID:7106100"
CDS 169260..170405
/locus_tag="BbuZS7_0166"
/note="identified by match to protein family HMM PF00691"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374694.1"
/db_xref="GI:218249525"
/db_xref="GeneID:7106100"
/translation="MLLLFLIQSLAFSSEIFEFKYIKGSKFRLEGTDNQKIYFNGHYN
SSSNTNIQISSEIKDIKENFASIKAFFRILKRENINEPYLLNEEFEEIFSVNKQGEYT
IGANQKRPSVRGIPRFPKTPIKINEKWSYLAEEYIEASKIDKSIKDFVVKFNVNYEYK
GKEEHNGKHYHIILSNYESQYNVKNISFYQKVDQKIYFDNEIGNTYKYSDKYIFEINQ
NNNQHFKMIGNSLGRIVSIELPNDNLIETEVENYIREKKIKAIEVEKNNKGINLSFDI
EFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSEKRARAI
GNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPLKAKNRRVEITILNN"
misc_feature <170037..170402
/locus_tag="BbuZS7_0166"
/note="Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Cell envelope
biogenesis, outer membrane]; Region: OmpA; COG2885"
/db_xref="CDD:32711"
misc_feature 170076..170393
/locus_tag="BbuZS7_0166"
/note="Peptidoglycan binding domains similar to the
C-terminal domain of outer-membrane protein OmpA; Region:
OmpA_C-like; cd07185"
/db_xref="CDD:143586"
misc_feature order(170097..170102,170199..170204,170211..170213,
170223..170228,170235..170237,170361..170363,
170373..170375)
/locus_tag="BbuZS7_0166"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:143586"
gene complement(170417..170794)
/locus_tag="BbuZS7_0167"
/db_xref="GeneID:7106602"
CDS complement(170417..170794)
/locus_tag="BbuZS7_0167"
/note="identified by match to protein family HMM PF01258"
/codon_start=1
/transl_table=11
/product="DnaK suppressor"
/protein_id="YP_002374695.1"
/db_xref="GI:218249386"
/db_xref="GeneID:7106602"
/translation="MQKAVSEHEFIEEIKKFLSAEKREILDSIKSVENSKKEIINNDM
YPKDVVDIAFDNMDGNNLEALGFVEKRKLNLINQALYRISQNSYGKCLACEREIARER
LLAIPYAFLCISCQTKKEKKNKR"
misc_feature complement(170420..170776)
/locus_tag="BbuZS7_0167"
/note="DnaK suppressor protein [Signal transduction
mechanisms]; Region: DksA; COG1734"
/db_xref="CDD:31920"
gene 170960..171181
/gene="infA"
/locus_tag="BbuZS7_0168"
/db_xref="GeneID:7106683"
CDS 170960..171181
/gene="infA"
/locus_tag="BbuZS7_0168"
/note="stimulates the activities of the other two
initiation factors, IF-2 and IF-3"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-1"
/protein_id="YP_002374696.1"
/db_xref="GI:218249257"
/db_xref="GeneID:7106683"
/translation="MNIKEEAIETEGIVKESLPNTMFRVELKNKHIVLAHLSGKMRKH
FIKIVPGDKVKVELSPYDLTKGRIVYREK"
misc_feature 170981..171172
/gene="infA"
/locus_tag="BbuZS7_0168"
/note="S1_IF1: Translation Initiation Factor IF1, S1-like
RNA-binding domain. IF1 contains an S1-like RNA-binding
domain, which is found in a wide variety of RNA-associated
proteins. Translation initiation includes a number of
interrelated steps preceding the...; Region: S1_IF1;
cd04451"
/db_xref="CDD:88417"
misc_feature order(171005..171013,171029..171031,171065..171067,
171074..171079,171092..171103,171152..171154,
171158..171160)
/gene="infA"
/locus_tag="BbuZS7_0168"
/note="rRNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88417"
misc_feature order(171065..171067,171077..171079,171170..171172)
/gene="infA"
/locus_tag="BbuZS7_0168"
/note="predicted 30S ribosome binding site; other site"
/db_xref="CDD:88417"
gene complement(171229..173232)
/locus_tag="BbuZS7_0169"
/db_xref="GeneID:7106466"
CDS complement(171229..173232)
/locus_tag="BbuZS7_0169"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374697.1"
/db_xref="GI:218249898"
/db_xref="GeneID:7106466"
/translation="MVIFFIYFFSIARLYSLTGIDFVKNIKVLKGDKFIQIVRLNNPL
QDIDISLLKVEINKEVQSNSNVLSISRTTDNNFSFIEIRVEYLFESLGFIKIPPLKVI
YKGDFYISSEVEVSVLRADEINSFGLPVDLYWDLDKKEIYEYQSIGLILRSNWLSDSN
SNEMSGSLPAIKDAMVEKMPIFGDIKYRTFHNKEILDVPFYNFVLTPLKGSKNVLIPS
FSFNIGSGLVRNTPELLLKVKPIPGEVKSLAVGTFRVDYETPTYSTIEQDIFTILIKI
TGQGNFPHFYFPEIETYNSKILNKKKNYSFKPSKNGYKGSISQIYTVKPDTKGSVFLN
IGDFNYLNPDNDTVYTLKGKKLKYEYSGEFNSINRAQNNVDYDFKLLSYADILNYKNK
TFLFFVSYYYLLLIPGFLLSLIILINYKKFFAASSFGLVILILAVGISLNAVNDGLLS
EKNVNDLIENYNTKNYDTALIKIDNILKKYPNYSGLWLNRALVLSKMDRDFDAIYSAY
KAFLASPNNETSYKVIDLIEAKNGVTDNVRNNSFIFSNIFFIISLFLINFLVVSISYR
FLAKNLKKIIIFLLFSAVCFTIFETYYFYYEQQSEVGIIKGDLVSLYKVPDNFSRSWR
FLKGNASVYILDSKDDFVLIETSYGLQGWIHKNFVVSLKDDLI"
misc_feature complement(172045..173166)
/locus_tag="BbuZS7_0169"
/note="Oxygen tolerance; Region: BatD; pfam13584"
/db_xref="CDD:205762"
misc_feature complement(171694..171852)
/locus_tag="BbuZS7_0169"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(171637..171843)
/locus_tag="BbuZS7_0169"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cl02429"
/db_xref="CDD:207591"
misc_feature complement(order(171658..171660,171703..171705,
171712..171714,171724..171726,171760..171762,
171805..171807,171814..171816,171826..171828))
/locus_tag="BbuZS7_0169"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(order(171640..171645,171652..171657,
171664..171669,171745..171750,171757..171762,
171766..171771))
/locus_tag="BbuZS7_0169"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(171256..171435)
/locus_tag="BbuZS7_0169"
/note="Bacterial SH3 domain homologues; Region: SH3b;
smart00287"
/db_xref="CDD:197629"
gene complement(173226..173813)
/locus_tag="BbuZS7_0170"
/db_xref="GeneID:7106358"
CDS complement(173226..173813)
/locus_tag="BbuZS7_0170"
/note="identified by match to protein family HMM PF00515;
match to protein family HMM PF07719"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374698.1"
/db_xref="GI:218249827"
/db_xref="GeneID:7106358"
/translation="MGRNFLAILYSCFLFLGFLSCSNVKSMSLMAIGNYEYVRGNYQN
AISNYYNLVEDEKYSAWGYYNLGVVYYSLGEYESSLRIFSYAKKTNDIFLNFNVNYNE
GVIYYNQGLYHKAEVAFKEALKINPSSYNAKYNLELAIIKKRTVRDSLNSLSVEKGKN
FVESNENFLRYIENLERVVWLRKIDENLAVPKEDW"
misc_feature complement(173430..173729)
/locus_tag="BbuZS7_0170"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(173556..173729)
/locus_tag="BbuZS7_0170"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(order(173487..173492,173499..173504,
173511..173516,173598..173603,173610..173615,
173619..173624,173709..173714,173721..173726))
/locus_tag="BbuZS7_0170"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(173448..173450,173457..173459,
173469..173471,173505..173507,173556..173558,
173565..173567,173577..173579,173613..173615,
173658..173660,173667..173669,173679..173681,
173715..173717))
/locus_tag="BbuZS7_0170"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(173433..173639)
/locus_tag="BbuZS7_0170"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
gene complement(173795..174667)
/locus_tag="BbuZS7_0172"
/db_xref="GeneID:7106207"
CDS complement(173795..174667)
/locus_tag="BbuZS7_0172"
/note="identified by match to protein family HMM PF00092"
/codon_start=1
/transl_table=11
/product="von Willebrand factor A"
/protein_id="YP_002374699.1"
/db_xref="GI:218249605"
/db_xref="GeneID:7106207"
/translation="MYGDNSYIQNYYIKKVLMTMFFIFSLIFLILSILDISWGQRAVE
DERNKLRISFIFDISRSMLSVDEGKIINRLESAKNMISLILSNFENAEYSLTIFKGKS
KLVLPFSKDKNSLNKMLNYIEPDLISSPGSFLGDAVFSVISNVQDDSYYNFLVILTDG
DDWGENNYYRFSKFVNNLKLESFVVGIGGSNPVLFNQNLSIKDKNGNLVKTGINEENL
LLLASSLKGSYYNLYLKGINFVVNDIRNGIIRRTSNDIILVDVSRYKIFLVISLLFIF
MYLFVRMIKWDETF"
misc_feature complement(174089..174517)
/locus_tag="BbuZS7_0172"
/note="von Willebrand factor type A domain; Region: VWA_2;
pfam13519"
/db_xref="CDD:205697"
misc_feature complement(order(174191..174193,174260..174262,
174497..174499))
/locus_tag="BbuZS7_0172"
/note="metal ion-dependent adhesion site (MIDAS); other
site"
/db_xref="CDD:29222"
gene 174654..174767
/locus_tag="BbuZS7_0171"
/db_xref="GeneID:7106857"
CDS 174654..174767
/locus_tag="BbuZS7_0171"
/note="identified by glimmer"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374700.1"
/db_xref="GI:218249554"
/db_xref="GeneID:7106857"
/translation="MSPYIKLKVLKNGIFRLKSSTHTKKINNKTKKKYKAL"
gene complement(174778..175779)
/locus_tag="BbuZS7_0173"
/db_xref="GeneID:7106804"
CDS complement(174778..175779)
/locus_tag="BbuZS7_0173"
/note="identified by match to protein family HMM PF00092"
/codon_start=1
/transl_table=11
/product="von Willebrand factor A"
/protein_id="YP_002374701.1"
/db_xref="GI:218249312"
/db_xref="GeneID:7106804"
/translation="MLTFNEPLYLFLLVIFPLIIYFNHFLKNRGGKIKFPISLYGNFN
SLKLKDYRLNLMYFFTYSFLYLAAMVMVFALAGPSVSKKKMIHLSAGADIVIVLDISP
SMGAVEFSSKNRLEFSKELIRSFISQRENDNIGLVAFAKDASIVVPITTDREFFNKKL
DDIYIMDLGNGSALGLGISIALSHLKHSEALKRSIVVLTDGVVNSDEIYKDQVINLAQ
GLNVKIYSIGIGSSEEFSVEFKLRSGKFYQGSFKEVYDPSMLVEISNKTGGLFYSVND
DFSFQFAIQDFSKKENLERKIKIAVDNKDIYKEFLVLAFCLLLVYFIFSKIFLKEIL"
misc_feature complement(175546..175779)
/locus_tag="BbuZS7_0173"
/note="Aerotolerance regulator N-terminal; Region: BatA;
cl06567"
/db_xref="CDD:208495"
misc_feature complement(174784..175764)
/locus_tag="BbuZS7_0173"
/note="Uncharacterized protein containing a von Willebrand
factor type A (vWA) domain [General function prediction
only]; Region: COG2304"
/db_xref="CDD:32459"
misc_feature complement(174940..175512)
/locus_tag="BbuZS7_0173"
/note="VWA BatA type: Von Willebrand factor type A (vWA)
domain was originally found in the blood coagulation
protein von Willebrand factor (vWF). Typically, the vWA
domain is made up of approximately 200 amino acid residues
folded into a classic a/b...; Region: vWA_BatA_type;
cd01467"
/db_xref="CDD:29240"
misc_feature complement(order(175180..175182,175264..175266,
175471..175473,175477..175479,175483..175485))
/locus_tag="BbuZS7_0173"
/note="metal ion-dependent adhesion site (MIDAS); other
site"
/db_xref="CDD:29240"
gene complement(175766..176671)
/locus_tag="BbuZS7_0174"
/db_xref="GeneID:7106522"
CDS complement(175766..176671)
/locus_tag="BbuZS7_0174"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374702.1"
/db_xref="GI:218249325"
/db_xref="GeneID:7106522"
/translation="MKRAVSNLFLFLTLSLYSYEIKNEIFMPTRYYVGDSVDFKVSLI
LNDGEEFSPVDFKDINIKDEFVEVNSISFNNTTNEIIVNFVSFYIGSSSLPSIYIGDV
ISNGKKNKVILKNIKINTDKLVSNNSDFKIKNIEGVLFIPGTSTYLFLFIFVLFLIPY
LVIKLLKLLNRLLIYLIVKHGLKKPYKVLQRQFVILSKYVRDGGDQSAFYNLINSSLR
VYLSKKTGFDFNAITTTEISIILQDLKVPYEIRSIFINTLRLSDFSKFSGVDLVFDSL
SFVLEDLRTAASNFEEFNRGANVNI"
gene complement(176675..177550)
/locus_tag="BbuZS7_0175"
/db_xref="GeneID:7106619"
CDS complement(176675..177550)
/locus_tag="BbuZS7_0175"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374703.1"
/db_xref="GI:218249496"
/db_xref="GeneID:7106619"
/translation="MIQDNEISSSTKTRIKALKFFSRKMLSELNFGGYRSIFKGLGLE
FHEFRPYEDSDDARFIDWNVSSKADSIFSKVFKEDRGMNLHLLVDNSLSMSLGDKVNK
KDVQDLLVSIFAHMAFFNNDKIGVTFFSSGTDKFIPSSKGHSHLGLILSETINRNLKP
GSSLAYIFKNTAEYYKKRSLVIIISDFKANAYFKSLNVLSKRHNVIAIRISDFFDENF
PKIGTLICEDIETGENFLVSGFSKSTLSGYKNYWTLDKIKWKKECIKKNISFIEIDTK
EDVFKKLKILLKKGQ"
misc_feature complement(176678..>177493)
/locus_tag="BbuZS7_0175"
/note="Uncharacterized conserved protein (some members
contain a von Willebrand factor type A (vWA) domain)
[General function prediction only]; Region: COG1721"
/db_xref="CDD:31907"
misc_feature complement(177173..177427)
/locus_tag="BbuZS7_0175"
/note="Protein of unknown function DUF58; Region: DUF58;
pfam01882"
/db_xref="CDD:202025"
misc_feature complement(176897..177304)
/locus_tag="BbuZS7_0175"
/note="von Willebrand factor (vWF) type A domain; Region:
VWA; smart00327"
/db_xref="CDD:197656"
gene complement(177565..178557)
/locus_tag="BbuZS7_0176"
/db_xref="GeneID:7106573"
CDS complement(177565..178557)
/locus_tag="BbuZS7_0176"
/note="identified by match to protein family HMM PF07726;
match to protein family HMM PF07728"
/codon_start=1
/transl_table=11
/product="ATPase AAA"
/protein_id="YP_002374704.1"
/db_xref="GI:218249367"
/db_xref="GeneID:7106573"
/translation="MKSGFQIDSEVENALHLINKFRREVATRVLGQKEMIDAILMGLL
TDGHVLLEGVPGLAKTLAIQTVSDVLDLEFKRIQFTPDLLPSDLTGNMVYKSATGTFK
VRKGPVFSNVILADEINRAPAKVQSALLEAMGERQVTLGDETHKLPDPFFVLATQNPI
EQEGTYNLPESQLDRFLLKVNVNYPSVQDEVRLLKIFSVDGRLENIKVAKVMNAYSLA
DIKRTVGRVKVDDKIMLYIVTLISASRERDKKTYPFAKYIEFGASPRASLSLLKCARV
NALYEGRIFVLPEDVKAVAYSVLRHRITPSYEAEVEEMSIDDIIRMLLSAVALP"
misc_feature complement(177568..178539)
/locus_tag="BbuZS7_0176"
/note="MoxR-like ATPases [General function prediction
only]; Region: COG0714"
/db_xref="CDD:31058"
misc_feature complement(178006..178467)
/locus_tag="BbuZS7_0176"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(178378..178401)
/locus_tag="BbuZS7_0176"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(178087..178089,178210..178212,
178375..178398))
/locus_tag="BbuZS7_0176"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(178207..178224)
/locus_tag="BbuZS7_0176"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(178033..178035)
/locus_tag="BbuZS7_0176"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene complement(178614..179240)
/gene="gidB"
/locus_tag="BbuZS7_0177"
/db_xref="GeneID:7106664"
CDS complement(178614..179240)
/gene="gidB"
/locus_tag="BbuZS7_0177"
/EC_number="2.1.-.-"
/note="identified by match to protein family HMM PF02527;
match to protein family HMM TIGR00138"
/codon_start=1
/transl_table=11
/product="16S rRNA methyltransferase GidB"
/protein_id="YP_002374705.1"
/db_xref="GI:218249711"
/db_xref="GeneID:7106664"
/translation="MISDIEFALSEHNFQFAYKDLQKINLYIKRILLLNTRFNLISNS
NSNFNSILNLHVIDSLLGLSTVKEINPSEVLDVGSGAGFPGIILAIFDTSRKYYLLER
SKKKSTFLKMIKLELDLENVKILEYEIEKEKKKYEFITIRAFRSMNEYALILKNLLKG
GGLIMAYKGKFDRINLEVNQIKNLFSKIEVKSLNSKLRVDRNLVLLYR"
misc_feature complement(178629..179183)
/gene="gidB"
/locus_tag="BbuZS7_0177"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cl16911"
/db_xref="CDD:213141"
gene complement(179237..181102)
/gene="gidA"
/locus_tag="BbuZS7_0178"
/db_xref="GeneID:7106884"
CDS complement(179237..181102)
/gene="gidA"
/locus_tag="BbuZS7_0178"
/note="GidA; glucose-inhibited cell division protein A;
involved in the 5-carboxymethylaminomethyl modification
(mnm(5)s(2)U) of the wobble uridine base in some tRNAs"
/codon_start=1
/transl_table=11
/product="tRNA uridine 5-carboxymethylaminomethyl
modification enzyme GidA"
/protein_id="YP_002374706.1"
/db_xref="GI:218249586"
/db_xref="GeneID:7106884"
/translation="MDFDAIVIGGGHAGIEAALALSRLNFKTLMITQNLDTIGKLSCN
PAIGGLAKGNMVREIDALGGEMGRIIDFSMIQFRVLNKSRGPAVQAPRAQADKLMYQT
KAKETLERQDNLDLFQDTVVDFLLNSMRNEIEGVVTERGNKFRSSVVVLTTGTFLRGK
IFIGEYRADMGRLAEFSAYGLDKTLLGLGFEMGRLKTGTPARIHKKSVDFSKTEVQFG
DSDIIPFSFSNGKLDKSQLSCYVTYTNKKTHEIISENMHLSPLYSGEIVGNGPRYCPS
IEDKIVKFKDKDRHQIFIEPEGFNTEEMYLNGLSSSLPENIQQKLINSIEGLEHAVIT
RPGYAVEYDYINPIELYPNLESKRVKGLFIAGQTNGSSGYEEAAAQGLMAGINAALRL
QNKKPMILTRTSSYIGVLIDDLVTKGTKEPYRMFTSRAEHRLNLRHDTSDKRLIKIGY
DLGLVDEKRYSRYLFKESRVEEIKELLKQRRLSLKDVVDEQLKKHVSKDFYHILKDPS
ISLDNLIKIDPSLSDSKVILEQVELDVKYEGYINRQKDLIKRLDNLELVKLPFDFNYE
IIEGLSREAREKFSKIQPATLAQASRIPGIRSTDITVLLIYFSNPKNKVVINFSL"
misc_feature complement(179282..181102)
/gene="gidA"
/locus_tag="BbuZS7_0178"
/note="tRNA uridine 5-carboxymethylaminomethyl
modification enzyme GidA; Validated; Region: PRK05192"
/db_xref="CDD:179960"
misc_feature complement(179870..>180151)
/gene="gidA"
/locus_tag="BbuZS7_0178"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(179285..179500)
/gene="gidA"
/locus_tag="BbuZS7_0178"
/note="GidA associated domain 3; Region: GIDA_assoc_3;
pfam13932"
/db_xref="CDD:206103"
gene complement(181105..182499)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/db_xref="GeneID:7106837"
CDS complement(181105..182499)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="in Escherichia coli this protein is involved in the
biosynthesis of the hypermodified nucleoside
5-methylaminomethyl-2-thiouridine, which is found in the
wobble position of some tRNAs and affects ribosomal
frameshifting; shows potassium-dependent dimerization and
GTP hydrolysis; also involved in regulation of
glutamate-dependent acid resistance and activation of
gadE"
/codon_start=1
/transl_table=11
/product="tRNA modification GTPase TrmE"
/protein_id="YP_002374707.1"
/db_xref="GI:218249887"
/db_xref="GeneID:7106837"
/translation="MSKFFERDDDIVALATPFLSSALCVIRSSGASSISKFSKIFSNH
SALNSASGNTIHYGYILDSENGCKVDEVVVCLYRAPKSFTGQDAIEVMAHGSVIGIKK
IIDLFLKSGFRMAEPGEFTLRAFLAKKIDLTKAEAIHEIIFAKTNKTYSLAVNKLSGA
LFVKIDAIKKSILNFLSAVSVYLDYEVDDHEISIPFDLILSSKAELKKLINSYKVYEK
IDNGVALVLAGSVNAGKSSLFNLFLKKDRSIVSSYPGTTRDYIEASFELDGILFNLFD
TAGLRDADNFVERLGIEKSNSLIKEASLVIYVIDVSSNLTKDDFLFIDSNKSNSKILF
VLNKIDLKINKSTEEFVRSKVLNSSNLIMISTKNLEGIDILYDKIRALISYERVEIGL
DDIIISSNRQMQLLEKAYALILDLLSKIDRQVSYDMLAFDAYEIINCLGEITGEVSSE
DVLDNMFKNFCLGK"
misc_feature complement(182113..182469)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="GTP-binding protein TrmE N-terminus; Region:
TrmE_N; pfam10396"
/db_xref="CDD:204472"
misc_feature complement(181108..182457)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="tRNA modification GTPase TrmE; Region:
mnmE_trmE_thdF; TIGR00450"
/db_xref="CDD:161885"
misc_feature complement(181351..181839)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="trmE is a tRNA modification GTPase; Region: trmE;
cd04164"
/db_xref="CDD:206727"
misc_feature complement(181792..181815)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="G1 box; other site"
/db_xref="CDD:206727"
misc_feature complement(order(181399..181407,181480..181482,
181486..181491,181789..181800,181804..181806))
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206727"
misc_feature complement(181720..181770)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="Switch I region; other site"
/db_xref="CDD:206727"
misc_feature complement(181729..181731)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="G2 box; other site"
/db_xref="CDD:206727"
misc_feature complement(order(181597..181641,181645..181677))
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="Switch II region; other site"
/db_xref="CDD:206727"
misc_feature complement(181663..181674)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="G3 box; other site"
/db_xref="CDD:206727"
misc_feature complement(181480..181491)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="G4 box; other site"
/db_xref="CDD:206727"
misc_feature complement(181399..181407)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="G5 box; other site"
/db_xref="CDD:206727"
misc_feature complement(181117..181323)
/gene="trmE"
/locus_tag="BbuZS7_0179"
/note="Catalytic cysteine-containing C-terminus of GTPase,
MnmE; Region: GTPase_Cys_C; pfam12631"
/db_xref="CDD:204989"
gene 182583..183077
/locus_tag="BbuZS7_0180"
/db_xref="GeneID:7106346"
CDS 182583..183077
/locus_tag="BbuZS7_0180"
/codon_start=1
/transl_table=11
/product="FlbF protein"
/protein_id="YP_002374708.1"
/db_xref="GI:218249855"
/db_xref="GeneID:7106346"
/translation="MKTKLETELKEVLKKELLLVEEIYNSYLKIKEYIDNKNEIGLKE
VANKTKILLESFKEIESKRDEIWKKFTKNENFKSTYEAVEKLTTIYKQEIYDYLHKLK
IGILNIKNLNYIIQNYVNTSLDMLSIIFQDIQESVENVTYKNPYGPKIGRSNEASVLI
NKKL"
gene 183089..184972
/gene="flgK"
/locus_tag="BbuZS7_0181"
/db_xref="GeneID:7106315"
CDS 183089..184972
/gene="flgK"
/locus_tag="BbuZS7_0181"
/note="with FlgL acts as a hook filament junction protein
to join the flagellar filament to the hook"
/codon_start=1
/transl_table=11
/product="flagellar hook-associated protein FlgK"
/protein_id="YP_002374709.1"
/db_xref="GI:218249283"
/db_xref="GeneID:7106315"
/translation="MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTM
KTEIPLYAPQLNRAKKQGQLGQGIVVQSIDRVKDELLNTRIIEESHRLGYWTSQDKFI
SILEDVYNEPEDQSIRKRLNDFWESWHDLANQPQGLAERKIILERGKSFCEGIRNRFH
SLERIYIMANDEIKITTDEANNYIRNIANLNKQISKSQAMKDNPNDLMDARDLMVEKL
GNIISVSIENKQDPNEFLIHAEGRHLVQGSIANEFKLEATNGPTRTRWNILWTNNDKA
YLKTGKLGSLLNIRDEEIKNEINELNNIAANIIEIVNEIHEAGRGMDKKNGRSFFSQE
LKLTDDRGRYDTNGNGQFDSVHIFKINSTNEIFPEEKLGFYGTLKFEATNSNEIVEIP
YNAPDTVQDVINRINNSNAQVTARINSEGKLEIKAVKEQEDENITFKIKHIEDSGSFL
TKYTGILNASGPEGAYDYKNIDTTDKLAPKSTYSISPLKNPAAWIKVADIIDSDPSKI
ASGIKNPTNEISIGDNQAALRISSFGNSQIMIGKNLTLNDYFANTASNIAIKGQISEI
TKESQSQILKDLTDLRMSISGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINK
MGV"
misc_feature 183089..184969
/gene="flgK"
/locus_tag="BbuZS7_0181"
/note="flagellar hook-associated protein FlgK; Validated;
Region: flgK; PRK06665"
/db_xref="CDD:180650"
misc_feature 184217..184369
/gene="flgK"
/locus_tag="BbuZS7_0181"
/note="Flagellin hook IN motif; Region: Flagellin_IN;
pfam07196"
/db_xref="CDD:148666"
misc_feature <184835..184957
/gene="flgK"
/locus_tag="BbuZS7_0181"
/note="Flagellar basal body rod FlgEFG protein C-terminal;
Region: Flg_bbr_C; pfam06429"
/db_xref="CDD:203447"
gene 184975..186249
/gene="flgL"
/locus_tag="BbuZS7_0182"
/db_xref="GeneID:7106493"
CDS 184975..186249
/gene="flgL"
/locus_tag="BbuZS7_0182"
/note="With FlgK acts as a hook filament junction protein
to join the flagellar filament to the hook"
/codon_start=1
/transl_table=11
/product="flagellar hook-associated protein FlgL"
/protein_id="YP_002374710.1"
/db_xref="GI:218249249"
/db_xref="GeneID:7106493"
/translation="MINRVSHPLTYENFKTSSAEQESKITKLLENLYKGGKRIVKLRN
DPTGVTHAIRLDNDIFKLNVYIKNIDTSKSNLRYTEGYLRSLTNILTRAKEIAIQGAS
GTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTRENKISKT
SKDGAGPQIIKVEYNGNQAEKKTEVYNDIHMSNNYPGNVIFFLQNQNIISSINTNGFA
VKENTKIYIDNIEIGLTAGDTALDIVAKINESSAPVEASIDPVLNSLSIKTTTPHQIW
ITEEKESNVLQTLGILTKNNDTKLPPYNLSSSTEVRSRSIFDALIELRDTLYNNKEEL
VGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMIQYTDLDVTK
AITNLNMASLAYQVSIGISAKIMQTTLLDFIK"
misc_feature 184978..186246
/gene="flgL"
/locus_tag="BbuZS7_0182"
/note="flagellar hook-associated protein FlgL; Validated;
Region: PRK06663"
/db_xref="CDD:180648"
misc_feature <185080..185403
/gene="flgL"
/locus_tag="BbuZS7_0182"
/note="Bacterial flagellin N-terminal helical region;
Region: Flagellin_N; pfam00669"
/db_xref="CDD:144315"
misc_feature 186001..186243
/gene="flgL"
/locus_tag="BbuZS7_0182"
/note="Bacterial flagellin C-terminal helical region;
Region: Flagellin_C; pfam00700"
/db_xref="CDD:144340"
gene 186251..186643
/locus_tag="BbuZS7_0183"
/db_xref="GeneID:7106458"
CDS 186251..186643
/locus_tag="BbuZS7_0183"
/note="binds to flagellin and appears to stabilize
flagellin during flagella assembly"
/codon_start=1
/transl_table=11
/product="flagellar assembly protein FliW"
/protein_id="YP_002374711.1"
/db_xref="GI:218249222"
/db_xref="GeneID:7106458"
/translation="MIDEKSIEFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKDV
SFLVTSPFNFLSEYLPNIQEKDWSDIKAKEEDEKVILCIINMHVNDYKDITANLKAPI
IINKKKLLGKQAICTNEKYSLHHKVFKE"
misc_feature 186251..186640
/locus_tag="BbuZS7_0183"
/note="flagellar assembly protein FliW; Provisional;
Region: PRK13285"
/db_xref="CDD:183948"
gene 186646..186891
/gene="csrA"
/locus_tag="BbuZS7_0184"
/db_xref="GeneID:7106763"
CDS 186646..186891
/gene="csrA"
/locus_tag="BbuZS7_0184"
/note="identified by match to protein family HMM PF02599;
match to protein family HMM TIGR00202"
/codon_start=1
/transl_table=11
/product="carbon storage regulator"
/protein_id="YP_002374712.1"
/db_xref="GI:218249503"
/db_xref="GeneID:7106763"
/translation="MLVLSRKANESIKINSDIEVLILEIKKDAVKIAIKAPENIKIFR
SEIYEFIIEENKKSLLKDKHNISKIKSLFNHYFKNEN"
misc_feature 186646..186852
/gene="csrA"
/locus_tag="BbuZS7_0184"
/note="carbon storage regulator (csrA); Region: csrA;
TIGR00202"
/db_xref="CDD:161763"
gene complement(186875..187528)
/locus_tag="BbuZS7_0185"
/db_xref="GeneID:7106580"
CDS complement(186875..187528)
/locus_tag="BbuZS7_0185"
/note="identified by match to protein family HMM PF00814"
/codon_start=1
/transl_table=11
/product="glycoprotease"
/protein_id="YP_002374713.1"
/db_xref="GI:218249591"
/db_xref="GeneID:7106580"
/translation="MVNTLAFEYSYKALIVYCRINNNNFSLVKLKSNLNFSVPKIFND
FVIKNNIDLNQIELIINSCGPGSFTGLRISLSFVKGLALGLSIPFVNISTLDVFANLV
ENNPSAVVLTFTAGKYFLGNYKNCKLIGKILCFSKKDLFEYLNQIDPNSVLIGNNLED
VCKECNYKFKIIENLSSFGKILTELGVAKYLKNRKGDDILSGPLYIRQSDAEVNFHS"
misc_feature complement(186884..187522)
/locus_tag="BbuZS7_0185"
/note="Inactive homolog of metal-dependent proteases,
putative molecular chaperone [Posttranslational
modification, protein turnover, chaperones]; Region:
COG1214"
/db_xref="CDD:31407"
misc_feature complement(<187130..187387)
/locus_tag="BbuZS7_0185"
/note="Glycoprotease family; Region: Peptidase_M22;
pfam00814"
/db_xref="CDD:201456"
gene complement(187521..187934)
/locus_tag="BbuZS7_0186"
/db_xref="GeneID:7106842"
CDS complement(187521..187934)
/locus_tag="BbuZS7_0186"
/note="identified by match to protein family HMM PF02367;
match to protein family HMM TIGR00150"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374714.1"
/db_xref="GI:218249343"
/db_xref="GeneID:7106842"
/translation="MILEFKSEKKMINFSKSFFYPLPIGKIFVLSGDMGSGKTSFLKG
LALNLGISYFTSPTYNIVNVYDFVNFKFYHIDLYRVSSLEEFELVGGLEILMDLDSII
AIEWPQIALSIVPKDRLFSLTFKIVGSGRVVELNG"
misc_feature complement(187524..187925)
/locus_tag="BbuZS7_0186"
/note="ATPase, YjeE family; Region: HI0065_YjeE;
TIGR00150"
/db_xref="CDD:129254"
gene complement(187931..188191)
/locus_tag="BbuZS7_0187"
/db_xref="GeneID:7106640"
CDS complement(187931..188191)
/locus_tag="BbuZS7_0187"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374715.1"
/db_xref="GI:218249334"
/db_xref="GeneID:7106640"
/translation="MQLISLNNIEKQESFIYYRNVYFADAIYKYNDILEIKKVKFVIE
ATPLGEKHVTIDFIDLLNYPVLKLMVAIKRRVIDLEFKGKLP"
gene complement(188405..188752)
/gene="rplT"
/locus_tag="BbuZS7_0188"
/db_xref="GeneID:7106629"
CDS complement(188405..188752)
/gene="rplT"
/locus_tag="BbuZS7_0188"
/note="binds directly to 23S ribosomal RNA prior to in
vitro assembly of the 50S ribosomal subunit"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L20"
/protein_id="YP_002374716.1"
/db_xref="GI:218249501"
/db_xref="GeneID:7106629"
/translation="MARAKNGTVHVARRKRILKKTKGFWGTKKSNYKKAKDTLRKGMM
YATRDRKVRKRDFRRLWISRISAALSDTGVTYSRFIEGLLKSNIKINRKILSNLAIED
VEAFKKIVLEIRR"
misc_feature complement(188414..188752)
/gene="rplT"
/locus_tag="BbuZS7_0188"
/note="ribosomal protein L20; Region: rpl20; CHL00068"
/db_xref="CDD:177008"
misc_feature complement(188423..188737)
/gene="rplT"
/locus_tag="BbuZS7_0188"
/note="Ribosomal protein L20; Region: Ribosomal_L20;
cd07026"
/db_xref="CDD:197305"
misc_feature complement(order(188471..188479,188501..188503,
188510..188515,188522..188527,188543..188545,
188555..188557,188564..188572,188576..188620,
188627..188632,188642..188647,188654..188665,
188669..188692,188705..188716,188720..188737))
/gene="rplT"
/locus_tag="BbuZS7_0188"
/note="23S rRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:197305"
misc_feature complement(order(188426..188431,188447..188452,
188468..188470,188477..188488,188603..188605,
188612..188617,188621..188626,188633..188635,
188645..188647))
/gene="rplT"
/locus_tag="BbuZS7_0188"
/note="L21 binding site [polypeptide binding]; other site"
/db_xref="CDD:197305"
misc_feature complement(order(188453..188455,188462..188464,
188471..188473,188543..188545,188549..188554,
188561..188563,188570..188575,188582..188584))
/gene="rplT"
/locus_tag="BbuZS7_0188"
/note="L13 binding site [polypeptide binding]; other site"
/db_xref="CDD:197305"
gene complement(188773..188973)
/gene="rpmI"
/locus_tag="BbuZS7_0189"
/db_xref="GeneID:7106578"
CDS complement(188773..188973)
/gene="rpmI"
/locus_tag="BbuZS7_0189"
/note="identified by match to protein family HMM PF01632;
match to protein family HMM TIGR00001"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L35"
/protein_id="YP_002374717.1"
/db_xref="GI:218249393"
/db_xref="GeneID:7106578"
/translation="MANKMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRN
LRKSGNLSCFEVKRIKTLLPYG"
misc_feature complement(188776..188964)
/gene="rpmI"
/locus_tag="BbuZS7_0189"
/note="50S ribosomal protein L35; Reviewed; Region: rpmI;
PRK00172"
/db_xref="CDD:178913"
gene complement(188996..189556)
/gene="infC"
/locus_tag="BbuZS7_0190"
/db_xref="GeneID:7106691"
CDS complement(188996..189556)
/gene="infC"
/locus_tag="BbuZS7_0190"
/note="IF-3 has several functions that are required and
promote translation initiation including; preventing
association of 70S by binding to 30S; monitoring
codon-anticodon interactions by promoting disassociation
of fMet-tRNA(fMet) from initiation complexes formed on
leaderless mRNAs or incorrectly bound noninitiatior tRNAs
and complexes with noncanonical start sites; stimulates
codon-anticodon interactions at P-site; involved in moving
mRNA to the P-site; and in recycling subunits"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-3"
/protein_id="YP_002374718.1"
/db_xref="GI:218249678"
/db_xref="GeneID:7106691"
/translation="MINRNANRDRDRSRSNDKELKINYRIKAREVRVIFENGTQEVLS
IEDAIKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEV
RMQPKIDAHDLDFKSKNILGFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGD
VNYVLESAAKMEGKTMFLIVAPKFKK"
misc_feature complement(188999..189505)
/gene="infC"
/locus_tag="BbuZS7_0190"
/note="translation initiation factor IF-3; Reviewed;
Region: infC; PRK00028"
/db_xref="CDD:178804"
misc_feature complement(189314..189505)
/gene="infC"
/locus_tag="BbuZS7_0190"
/note="Translation initiation factor IF-3, N-terminal
domain; Region: IF3_N; pfam05198"
/db_xref="CDD:191228"
misc_feature complement(189008..189271)
/gene="infC"
/locus_tag="BbuZS7_0190"
/note="Translation initiation factor IF-3, C-terminal
domain; Region: IF3_C; pfam00707"
/db_xref="CDD:201407"
gene complement(189756..189878)
/locus_tag="BbuZS7_0191"
/db_xref="GeneID:7106138"
CDS complement(189756..189878)
/locus_tag="BbuZS7_0191"
/note="identified by glimmer"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374719.1"
/db_xref="GI:218249632"
/db_xref="GeneID:7106138"
/translation="MQEILLKHGLGYFLFDFVLAEYSYKFLILVVDLLIKINSL"
gene 189884..190414
/locus_tag="BbuZS7_0192"
/db_xref="GeneID:7106091"
CDS 189884..190414
/locus_tag="BbuZS7_0192"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374720.1"
/db_xref="GI:218249973"
/db_xref="GeneID:7106091"
/translation="MFSFLYLTKEFILYRSFELDYTSRISLGISIFIKEHLYYYIFPL
LIFIFFFTLNENSLFKKKLTILIYFTFGLIFSKNLEIIILNSKIFGIYEYIELPILNA
IELIFSAIIFEKKIKKCQKYSAKEYKIILSPILFLGLFIATLKTLILTNMSIYALIIL
GLALISITINNKYTEK"
gene 190416..191156
/locus_tag="BbuZS7_0193"
/db_xref="GeneID:7106279"
CDS 190416..191156
/locus_tag="BbuZS7_0193"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_002374721.1"
/db_xref="GI:218249297"
/db_xref="GeneID:7106279"
/translation="MSGPKKLAIIALLVISIQGCKESSIIEKQFNYAIIFSDATEYFF
EIQKTPFIKNEILFINDKNLEIIKDKLKTTKKILLTHKSNNEILNNEILKEKIFYLSK
IKFSLKKSIDFLLNEKSIDLQKTLLFRDKSLNNEDLEYLEKKGKEKNVNITLINEKNI
SYIQTFITSQIKTIILFSLRDNNIILKKILNSPFSKNIKFVLIGNTRKDLKIIKLKYI
ITLKEPDLIKIAKDVEKDFQYEFNIYKQ"
misc_feature 190818..>191042
/locus_tag="BbuZS7_0193"
/note="Type 1 periplasmic binding fold superfamily;
Region: Periplasmic_Binding_Protein_Type_1; cl10011"
/db_xref="CDD:209116"
gene complement(191215..192024)
/locus_tag="BbuZS7_0194"
/db_xref="GeneID:7106507"
CDS complement(191215..192024)
/locus_tag="BbuZS7_0194"
/note="identified by match to protein family HMM PF01026;
match to protein family HMM TIGR00010"
/codon_start=1
/transl_table=11
/product="hydrolase TatD"
/protein_id="YP_002374722.1"
/db_xref="GI:218249768"
/db_xref="GeneID:7106507"
/translation="MMDSLLETEKSIFFDKLIDTHVHFYELKKRSLDVNYIINECFKN
GFSYFLDVGLHPSDFNDRKDLLSPYSNVFLTAGIHPLNLSDHFKDDIKQLEKILISEN
VVAVGEMGLDYFKADNKKFQIKALEEQLYLADKYKRPVILHIRDAYDDVYNIVRSLNF
LNRGILHCYSGTYEHAKKFIDLGFKVSFSGNITFKNAQPLRILVGKLNINDLLIETDS
PFLAPVPLRGKINSPLFLGYVCLEIARIKNCSVNDVAVAVYNSFKDLLLLH"
misc_feature complement(191227..191976)
/locus_tag="BbuZS7_0194"
/note="TatD like proteins; E.coli TatD is a cytoplasmic
protein, shown to have magnesium dependent DNase activity;
Region: TatD_DNAse; cd01310"
/db_xref="CDD:30053"
misc_feature complement(order(191374..191376,191524..191526,
191596..191598,191956..191958,191962..191964))
/locus_tag="BbuZS7_0194"
/note="active site"
/db_xref="CDD:30053"
gene complement(192021..193160)
/locus_tag="BbuZS7_0195"
/db_xref="GeneID:7106941"
CDS complement(192021..193160)
/locus_tag="BbuZS7_0195"
/note="identified by match to protein family HMM PF00515;
match to protein family HMM PF07719"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374723.1"
/db_xref="GI:218249485"
/db_xref="GeneID:7106941"
/translation="MLNEKILDALGDLSSISDDQLLDVTEKSKRGYQLIKEERLSEAE
SLFSDILEKDNENNYALVGLGDIERKKNNYDKAIVYYQKCLVKHPSNNYALFGLGDCY
RNLDNYKKATDIWEEYLKYDPENITVLTRVAASYRKLKNFQKSKQTYLKVMELIPDND
YALVGIGHLYYDFKEYKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYF
FKKALEISPSNFYAVFGLADCYRGNKEYKEALKYWLDIIEKDPKNNLVLTRVGDAYRY
LNDYENSQIYYKKALDVDFDMFAILGLALIQKEQGKYEEALIAIKSLIKNNPKNSALY
VNAAECYEALGQIGNAVDILSSFLQLGMKNIVVIDYLAVLRKKME"
misc_feature complement(192687..192986)
/locus_tag="BbuZS7_0195"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(192744..192749,192756..192761,
192768..192773,192849..192854,192861..192866,
192870..192875,192960..192965,192972..192977,
192981..192986))
/locus_tag="BbuZS7_0195"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(192792..192986)
/locus_tag="BbuZS7_0195"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(order(192705..192707,192714..192716,
192726..192728,192762..192764,192807..192809,
192816..192818,192828..192830,192864..192866,
192909..192911,192918..192920,192930..192932,
192966..192968))
/locus_tag="BbuZS7_0195"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(192690..192884)
/locus_tag="BbuZS7_0195"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(192477..192692)
/locus_tag="BbuZS7_0195"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature complement(192378..192578)
/locus_tag="BbuZS7_0195"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(192279..192569)
/locus_tag="BbuZS7_0195"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(192330..192335,192342..192347,
192354..192359,192435..192440,192447..192452,
192456..192461,192546..192551,192558..192563,
192567..192569))
/locus_tag="BbuZS7_0195"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(192291..192293,192300..192302,
192312..192314,192348..192350,192393..192395,
192402..192404,192414..192416,192450..192452,
192495..192497,192504..192506,192516..192518,
192552..192554))
/locus_tag="BbuZS7_0195"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(192279..192455)
/locus_tag="BbuZS7_0195"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(192081..192365)
/locus_tag="BbuZS7_0195"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(192129..192134,192141..192146,
192153..192158,192234..192239,192246..192251,
192255..192260,192342..192347,192354..192359,
192363..192365))
/locus_tag="BbuZS7_0195"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(192090..192092,192099..192101,
192111..192113,192147..192149,192192..192194,
192201..192203,192213..192215,192249..192251,
192291..192293,192300..192302,192312..192314,
192348..192350))
/locus_tag="BbuZS7_0195"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(192081..192260)
/locus_tag="BbuZS7_0195"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:205610"
gene 193498..194571
/gene="prfA"
/locus_tag="BbuZS7_0196"
/db_xref="GeneID:7106562"
CDS 193498..194571
/gene="prfA"
/locus_tag="BbuZS7_0196"
/note="recognizes the termination signals UAG and UAA
during protein translation a specificity which is
dependent on amino acid residues residing in loops of the
L-shaped tRNA-like molecule of RF1; this protein is
similar to release factor 2"
/codon_start=1
/transl_table=11
/product="peptide chain release factor 1"
/protein_id="YP_002374724.1"
/db_xref="GI:218249543"
/db_xref="GeneID:7106562"
/translation="MLLEKLNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEK
INTKKIEYEKILSQINDTKTILEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLP
QDENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFK
EIIFEIKGKDVFKKLKYESGVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINE
KDLRIDVYRSSGAGGQHVNTTDSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRAR
LYEFEDSKKQEQRSSNRKQQVGSGDRSERIRTYNFPQNRITDHRANITLYKLEEFMQG
ELDPLLDPLMIALQEQELKSNSI"
misc_feature 193498..194565
/gene="prfA"
/locus_tag="BbuZS7_0196"
/note="peptide chain release factor 1; Validated; Region:
prfA; PRK00591"
/db_xref="CDD:179074"
misc_feature 193690..194031
/gene="prfA"
/locus_tag="BbuZS7_0196"
/note="This domain is found in peptide chain release
factors; Region: PCRF; smart00937"
/db_xref="CDD:198005"
misc_feature 194116..194457
/gene="prfA"
/locus_tag="BbuZS7_0196"
/note="RF-1 domain; Region: RF-1; pfam00472"
/db_xref="CDD:201249"
gene 194574..195098
/locus_tag="BbuZS7_0197"
/note="protoporphyrinogen oxidase; this gene contains a
frame shift which may be the result of sequencing error"
/pseudo
/db_xref="GeneID:7106793"
gene 195074..195433
/locus_tag="BbuZS7_0198"
/note="protoporphyrinogen oxidase; this gene contains a
frame shift which may be the result of sequencing error"
/pseudo
/db_xref="GeneID:7106758"
gene 195390..197393
/locus_tag="BbuZS7_0199"
/db_xref="GeneID:7106852"
CDS 195390..197393
/locus_tag="BbuZS7_0199"
/EC_number="3.1.7.2"
/note="identified by match to protein family HMM PF01966;
match to protein family HMM PF02824; match to protein
family HMM PF04607; match to protein family HMM TIGR00691"
/codon_start=1
/transl_table=11
/product="guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase ((ppGpp)ase)"
/protein_id="YP_002374725.1"
/db_xref="GI:218249436"
/db_xref="GeneID:7106852"
/translation="MIQAYEIAHLIKINDLEKARNIFKKTVENTYKDEFERKSIFKAL
EIAEQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNVEKEEI
VKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMFFAMTHDIRIIIIKLADKLHN
MTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHLYPKDYKEIKNF
LSETKIEREKKLYKGKLSIEKELQKSGIEAEITVRSKHFYSIFRKMQTRTNKLTQIFD
TLGIRIICKKQKECYEILEIVHRVWKPIPGRLKDYIASPKENKYQSLHTTVRIPEDNQ
LIEIQIRTEEMDRIANYGVAAHWIYKEQIELKADDLSFINRIKKWQQESANKSQYSMN
DIHKELLNTFIYVYTPEGEVVELPFGSNSIDFAYIIHTDIGDQALYAKINGKISSITK
PLKNEQIVEIFTSKDSKPDVIWLNSVRTKKARSKIRSWLNKNDNTIFVDNNIIAYLVG
ANKEQRKLFSLFKSYTKTKIKRIAIDPECSPTTGEDIIGIIHKDEIIVHNENCQKLKS
YKKPQLIEVEWEATPTRKVHHIILLLKELKGIFSYLENIFTLNDVRLISEKIEDCGNG
HGITNIIVSSNAKNITKIISALKENPNILQIMQIEEDIKNYDN"
misc_feature 195516..197360
/locus_tag="BbuZS7_0199"
/note="(p)ppGpp synthetase, RelA/SpoT family; Region:
spoT_relA; TIGR00691"
/db_xref="CDD:211600"
misc_feature 195516..195968
/locus_tag="BbuZS7_0199"
/note="HD domain; Region: HD_4; pfam13328"
/db_xref="CDD:205508"
misc_feature 196098..196442
/locus_tag="BbuZS7_0199"
/note="Nucleotidyltransferase (NT) domain of RelA- and
SpoT-like ppGpp synthetases and hydrolases; Region:
NT_Rel-Spo_like; cd05399"
/db_xref="CDD:143389"
misc_feature order(196146..196148,196152..196154,196215..196220,
196230..196232,196314..196316,196320..196322,
196335..196337,196341..196343,196347..196349,
196359..196361,196398..196400,196404..196406,
196410..196412,196434..196439)
/locus_tag="BbuZS7_0199"
/note="synthetase active site [active]"
/db_xref="CDD:143389"
misc_feature order(196146..196148,196314..196316,196320..196322,
196335..196337,196341..196343,196347..196349,
196359..196361,196398..196400,196404..196406,
196434..196436)
/locus_tag="BbuZS7_0199"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143389"
misc_feature order(196215..196217,196398..196400)
/locus_tag="BbuZS7_0199"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143389"
misc_feature 196596..196775
/locus_tag="BbuZS7_0199"
/note="TGS_RelA_SpoT: The RelA (SpoT) protein, also
referred to as ppGpp hydrolase/synthetase, is a
ribosome-associated protein that is activated during amino
acid starvation and thought to mediate the stringent
response. RelA contains a TGS domain, named after...;
Region: TGS_RelA_SpoT; cd01668"
/db_xref="CDD:133438"
gene 197383..199647
/locus_tag="BbuZS7_0200"
/db_xref="GeneID:7106430"
CDS 197383..199647
/locus_tag="BbuZS7_0200"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374726.1"
/db_xref="GI:218249835"
/db_xref="GeneID:7106430"
/translation="MTINILLLLLLLSSTGPTIVPNKMEKNAFNSSNKITSIETEKNI
KTHIRKIHQLNERQEKIINTFNYIKKYFNTNEVKYMEYSLQEIGFIGYSQKIIHSKIK
GKNANTYNIITPIKIQKNLKNNLAIGIAIELLNKLKNTNPENNINFFFVEDDSLEQNT
IISSRILLSNKYLGKNTNTIYLMLNENKIKNKIYLENESFITNSKTNLGFLKAIIKTF
EKNKLDFNTAKITEKKSNNLYNLYRDESIPLLIINNNLNPILTQNKNTIFEIYKSIEE
TLTNEYKSKNTDETHYIVIDTPFKKIIINEIALIALIYICYNLIIIVFIRKFKEAGIV
MKKVKNNYYKLVRLFFTLFLSTYISLLLTNKIFAGYENTAIYSITNPKYLITFFATLL
IHNLLSLFTYNFTIYLNYRQLKYLAISTSIIEPIILMFIKIEFILIIIIKSILLLIKP
NKNTIIRKIVILIIWIINFVLITLIQNTTSIKNTLTLSYIISTCLFSSIFINISEHLK
SKLPKIKQNLKKAENLGLVTFFLITTIIISSNIDKKEHEIQIEQTVSFPEKINKIKIE
YPKDKKHPIQIISNDFNLTLQANEKILKTNIEVDDELMNIDLKKIDIAERAVYSIDLV
TQKIANQIELHFKNASKLIIYQSNTPYKILANKIIFTLKNINSKKTTIAFTLKSQDDI
AYEAFANIYIKKNQIKIYNKTNNTEEKNIKINYSYKIKYSGILPKAEKYKNLEYFKLK
DDKEIENLKNLKLN"
gene complement(199662..200747)
/locus_tag="BbuZS7_0201"
/db_xref="GeneID:7106215"
CDS complement(199662..200747)
/locus_tag="BbuZS7_0201"
/EC_number="6.3.2.4"
/note="D-alanine--D-alanine ligase; DdlA; DdlB;
cytoplasmic; catalyzes the formation of D-alanyl-D-alanine
from two D-alanines in peptidoglycan synthesis; there are
two forms of this enzyme in Escherichia coli"
/codon_start=1
/transl_table=11
/product="D-alanyl-alanine synthetase A"
/protein_id="YP_002374727.1"
/db_xref="GI:218249946"
/db_xref="GeneID:7106215"
/translation="MKKNLMLIFGGVSFEHEISCKSAYSIYLALLDLNKYNIYPVYID
KCTGVWYLLDSVSDPPKPINTDVLPIVSLLPGFGIFSNNKNLEIDVVFPVVHGRTGED
GAIQGVLKVMDIPCVGAGIIGSAISSNKYFCKLLLKSFDIPLVPFIGFRQHDYFLDKE
EIKKNVKEVLGYPVIVKPAVLGSSIGINVAYSENQIESFIKEALKYDLTIVIEKFIEA
REIECSIIGNEKMKIFSPGEVVVQDFIFYDYDAKYSVIPGNSIIFNIPAHLETNQLLS
IKEYAFLAYKNLELRGMARVDFFVEKKSGTIYLNEINTIPGFTDISMFAKMCSNDGLQ
FKDLVDNLIDYAFQSYINRKKRIDFEN"
misc_feature complement(199665..200747)
/locus_tag="BbuZS7_0201"
/note="D-alanyl-alanine synthetase A; Provisional; Region:
PRK14570"
/db_xref="CDD:173034"
misc_feature complement(200391..200741)
/locus_tag="BbuZS7_0201"
/note="D-ala D-ala ligase N-terminus; Region:
Dala_Dala_lig_N; pfam01820"
/db_xref="CDD:201991"
misc_feature complement(199716..200342)
/locus_tag="BbuZS7_0201"
/note="D-ala D-ala ligase C-terminus; Region:
Dala_Dala_lig_C; pfam07478"
/db_xref="CDD:203643"
gene complement(200749..202275)
/locus_tag="BbuZS7_0202"
/db_xref="GeneID:7106252"
CDS complement(200749..202275)
/locus_tag="BbuZS7_0202"
/EC_number="6.3.2.13"
/note="identified by match to protein family HMM PF01225;
match to protein family HMM PF02875; match to protein
family HMM PF08245; match to protein family HMM TIGR01085"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
6-diaminopimelate ligase"
/protein_id="YP_002374728.1"
/db_xref="GI:218249248"
/db_xref="GeneID:7106252"
/translation="MNKKLNEVLLKLDQDLIKCVKGSLDLEISGVTYSSKLVLPRFVF
FALPGIHFDGHDFIEIAIQKGSNVVVCSRDVDFYSPNVTYIKVDDFNIRKFMSNFSNI
FYDEPSKKLKVIGVTGTDGKSSVCYYIYLLFKKKGVKVGFISTVFFDDGSGSLIKNPY
RQSTPESTEIHSFLSTMVKNEAQYAILESTSHGLDLETARLIDVNYFAVVFTNIGHEH
LEFHGTIQNYLNVKLGLFRSVSDDAGFGVINLDDLYSSDFKNAVKKSFTYSLKSSKAD
FFVSFIDEKTDSTRFEFYHKGVKYLANVSLLGSFNVENVMAALILVSQILNIDIQDIV
DKLNCIKSLDGRMDSINLGQNFSVIIDYAHTPGAFSKLFPIFKRFATNRLISVFGSAG
ERDVEKRFLQGQIADIYSDLIILCDEDPRGENSMCIIKDIAKGIVNKVENKDLFFIAD
RKQAIEKAISLAKAGDLVVALGKGHESSIIYKNREVFWNEQEVVKNAILSLEKSEKEK
"
misc_feature complement(200803..202203)
/locus_tag="BbuZS7_0202"
/note="UDP-N-acetylmuramyl-tripeptide synthetase; Region:
murE; TIGR01085"
/db_xref="CDD:211623"
misc_feature complement(201964..202197)
/locus_tag="BbuZS7_0202"
/note="Mur ligase family, catalytic domain; Region:
Mur_ligase; pfam01225"
/db_xref="CDD:201670"
misc_feature complement(201340..201927)
/locus_tag="BbuZS7_0202"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature complement(200989..201243)
/locus_tag="BbuZS7_0202"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 202389..202466
/locus_tag="BbuZS7_0203"
/db_xref="GeneID:7106457"
tRNA 202389..202466
/locus_tag="BbuZS7_0203"
/product="tRNA-Cys"
/db_xref="GeneID:7106457"
gene 202547..203785
/locus_tag="BbuZS7_0204"
/db_xref="GeneID:7106302"
CDS 202547..203785
/locus_tag="BbuZS7_0204"
/note="identified by match to protein family HMM PF00571;
match to protein family HMM PF01595; match to protein
family HMM PF03471"
/codon_start=1
/transl_table=11
/product="hemolysin"
/protein_id="YP_002374729.1"
/db_xref="GI:218249425"
/db_xref="GeneID:7106302"
/translation="MLELIIILLFIILSAIFSASETAYTSLSIIQIQDIRKKGKSGIS
VYNLVQSPSKLITTILIGNNISNIVASTLTTKFVLEKYGNSALAISTGLITIIVLIFA
EILPKQIAILNNEIIALSTSFFLKPLIFIFTPLIYIINKIIKKILNLFKVKTSSQMTK
ESIKNMLSLAGSLGILKNDSRIFMQKMLDIDQVRASEIMTHRTGVFSLSSSSKLKDVI
KLIKEEGYSRIPIYKGQSREQIIGILIAKDLIEVNKKDMNKNVSQFIKPAVFVQQNKR
IKDILDIMRKKQKIMAIVIDEYGGFSGILTIEDIVEKIFGAISDEYDIKEEKPLITQI
NDNTYSILGETTFDEIEEAIGISIKHKEYTNTIGGYLIDLLDKIPTKNETVKTNDGEY
FIKEIQNNKIETITFIKSKK"
misc_feature 202610..203782
/locus_tag="BbuZS7_0204"
/note="Hemolysins and related proteins containing CBS
domains [General function prediction only]; Region: TlyC;
COG1253"
/db_xref="CDD:31445"
misc_feature 202610..203083
/locus_tag="BbuZS7_0204"
/note="Domain of unknown function DUF21; Region: DUF21;
pfam01595"
/db_xref="CDD:201879"
misc_feature 203153..203482
/locus_tag="BbuZS7_0204"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains associated
with the CorC_HlyC domain. CorC_HlyC is a transporter
associated domain. This small domain is found in Na+/H+
antiporters, in proteins involved in...; Region:
CBS_pair_CorC_HlyC_assoc; cd04590"
/db_xref="CDD:73090"
misc_feature 203540..203761
/locus_tag="BbuZS7_0204"
/note="Transporter associated domain; Region: CorC_HlyC;
smart01091"
/db_xref="CDD:198159"
gene 203834..204769
/gene="hflK"
/locus_tag="BbuZS7_0205"
/db_xref="GeneID:7106419"
CDS 203834..204769
/gene="hflK"
/locus_tag="BbuZS7_0205"
/note="identified by match to protein family HMM PF01145;
match to protein family HMM TIGR01933"
/codon_start=1
/transl_table=11
/product="HflK protein"
/protein_id="YP_002374730.1"
/db_xref="GI:218249732"
/db_xref="GeneID:7106419"
/translation="MFDIKQIFNKTYEYLIIIITLILISIIVIANIFIVGPSEEAIVL
RLGKLNRTLDSGIHVKIPLIEEKFIVPVKIVQEIKFGFLISPSDIRENDNANDESRII
TGDLNIINIEWLVQYKIRDPYSFKFKVEDPETTIKDIAKSSMNRLIGDNTIFEIINDN
RVGITEGVKSSMNEIIDNYNLGIDVVQVQIRNALPPKGKVYEAFEDVNIAIQDKNKYI
NEGRKEFNQIVPKIKGEALKVIEEARGYKESRINNALADTEIFNAILDAYLKNPDITK
ERLYNETMKEILENKDNIELIDKNFKNFLPFKEVK"
misc_feature 203936..204766
/gene="hflK"
/locus_tag="BbuZS7_0205"
/note="HflK protein; Region: hflK; TIGR01933"
/db_xref="CDD:130988"
misc_feature 203936..204697
/gene="hflK"
/locus_tag="BbuZS7_0205"
/note="Band_7_HflK: The band 7 domain of flotillin
(reggie) like proteins. This group includes proteins
similar to prokaryotic HlfK (High frequency of
lysogenization K). Although many members of the band 7
family are lipid raft associated, prokaryote plasma...;
Region: Band_7_HflK; cd03404"
/db_xref="CDD:48216"
gene 204770..205741
/gene="hflC"
/locus_tag="BbuZS7_0206"
/db_xref="GeneID:7106905"
CDS 204770..205741
/gene="hflC"
/locus_tag="BbuZS7_0206"
/note="identified by match to protein family HMM PF01145;
match to protein family HMM TIGR01932"
/codon_start=1
/transl_table=11
/product="HflC protein"
/protein_id="YP_002374731.1"
/db_xref="GI:218249631"
/db_xref="GeneID:7106905"
/translation="MKFIINLLLSTIKITTFTVIVCLTILSIFQPIYILKENEISITT
RLGKIQRTENLAGLKYKIPLIENVQIFPKIILRWDGEPQRIPTGGEEKQLIWIDTTAR
WKIADINKFYTTIKTMSRAYVRIDAAIEPAVRGVIAKYPLLEIIRSSNDPIQRLSNGI
LTPQETKINGIYKITKGRKIIEKEIIRIANNNTKDIGIEIVDVLIRKVTYDPSLIESV
NNRMISERQQIAEEQRSIGLAEKTEILGSIEKEKLKILSEAKATAAKIKAEGDREAAK
IYSNAYGKNIEFYKFWQALESYKAVLKDKRKIFSTDMDFFQYLHKRN"
misc_feature 204803..205729
/gene="hflC"
/locus_tag="BbuZS7_0206"
/note="HflC protein; Region: hflC; TIGR01932"
/db_xref="CDD:162612"
misc_feature 204863..205675
/gene="hflC"
/locus_tag="BbuZS7_0206"
/note="Band_7_HflC: The band 7 domain of flotillin
(reggie) like proteins. This group includes proteins
similar to prokaryotic HlfC (High frequency of
lysogenization C). Although many members of the band 7
family are lipid raft associated, prokaryote plasma...;
Region: Band_7_HflC; cd03405"
/db_xref="CDD:48217"
gene 206029..206106
/locus_tag="BbuZS7_0207"
/db_xref="GeneID:7106090"
tRNA 206029..206106
/locus_tag="BbuZS7_0207"
/product="tRNA-Phe"
/db_xref="GeneID:7106090"
gene 206124..206201
/locus_tag="BbuZS7_0208"
/db_xref="GeneID:7106304"
tRNA 206124..206201
/locus_tag="BbuZS7_0208"
/product="tRNA-Phe"
/db_xref="GeneID:7106304"
gene 206226..207776
/locus_tag="BbuZS7_0209"
/note="conserved hypothetical protein; this gene contains
a frame shift which may be the result of sequencing error"
/pseudo
/db_xref="GeneID:7106700"
gene complement(207780..208349)
/locus_tag="BbuZS7_0211"
/db_xref="GeneID:7106176"
CDS complement(207780..208349)
/locus_tag="BbuZS7_0211"
/note="identified by match to protein family HMM PF03602;
match to protein family HMM TIGR00095"
/codon_start=1
/transl_table=11
/product="methyltransferase"
/protein_id="YP_002374732.1"
/db_xref="GI:218249780"
/db_xref="GeneID:7106176"
/translation="MFFKIVLKFLFMYVSSGKYKGKKILFPKNGSVRPVMSLVREAFF
SIIFKDIVNSKFLDVFAGTGIMSVEALSRGASLAHLVECNRKIKITLVENFSFVEEFY
KFFFQRAEDFLSKKDLFYDFIYLDPPFNYKNKINLLEIILKGKILNDKVSIIMHYPSN
EDLEINTSKFSVYNLKRYGGSKLIFLKIL"
misc_feature complement(<207957..208187)
/locus_tag="BbuZS7_0211"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(207972..207974,208023..208031,
208101..208106,208155..208175))
/locus_tag="BbuZS7_0211"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 208297..209238
/gene="galU"
/locus_tag="BbuZS7_0210"
/db_xref="GeneID:7106157"
CDS 208297..209238
/gene="galU"
/locus_tag="BbuZS7_0210"
/note="identified by match to protein family HMM PF00483"
/codon_start=1
/transl_table=11
/product="UDP-glucose pyrophosphorylase"
/protein_id="YP_002374733.1"
/db_xref="GI:218249271"
/db_xref="GeneID:7106157"
/translation="MPELTYINKNFKTILKNNEYIKLNFCYNLILREKNMKGIILAAG
YGTRFLPITKTIPKEMLPILNKPAIDYIIQEFIDSGIKDILLISSRRKKVLEDYFDRE
IELENIFLKENKKDELEKIRSKKINISFIRQKEMLGTGNALLYAKPWINREPVVVAYP
DDLCIGNPPLSLQLIKLYEKTGKNIISIIENPENINRYGVIDLYKDEIHVKNIIEKPK
IGSEPSNKASIGRFLYNYEFFEHLEEGFKLHKKGEYYHIYALKKLMDQKKVLYKNIEG
KRIDIGTLEGYLEAIINSAKKDKKLMGIIKKGINEND"
misc_feature 208402..209181
/gene="galU"
/locus_tag="BbuZS7_0210"
/note="Prokaryotic UGPase catalyses the synthesis of
UDP-glucose; Region: UGPase_prokaryotic; cd02541"
/db_xref="CDD:133021"
misc_feature 208402..209166
/gene="galU"
/locus_tag="BbuZS7_0210"
/note="dTDP-glucose pyrophosphorylase [Cell envelope
biogenesis, outer membrane]; Region: RfbA; COG1209"
/db_xref="CDD:31402"
misc_feature order(208417..208428,208468..208473,208693..208695,
208702..208713,208771..208773,208777..208782,
208888..208893,208939..208944,208978..208980,
209065..209067)
/gene="galU"
/locus_tag="BbuZS7_0210"
/note="active site"
/db_xref="CDD:133021"
misc_feature order(208429..208431,208438..208452,208456..208464,
208474..208482,208486..208494,208504..208506,
208576..208578,208582..208590,208594..208596,
208606..208611,208687..208692,208696..208698,
208702..208704,208885..208887,209053..209055,
209125..209127,209143..209151,209155..209163,
209167..209175)
/gene="galU"
/locus_tag="BbuZS7_0210"
/note="tetramer interface; other site"
/db_xref="CDD:133021"
gene 209225..210970
/locus_tag="BbuZS7_0212"
/note="conserved hypothetical protein; this gene contains
a frame shift which may be the result of sequencing error"
/pseudo
/db_xref="GeneID:7106481"
gene 210997..211764
/locus_tag="BbuZS7_0213"
/db_xref="GeneID:7106723"
CDS 210997..211764
/locus_tag="BbuZS7_0213"
/note="identified by match to protein family HMM PF00515"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374734.1"
/db_xref="GI:218249498"
/db_xref="GeneID:7106723"
/translation="MRIYLFLNKNYKIFILFLILILNSKLAYSQRLIRIGKEEMKNKN
YIQAIETLSDAIKKYPKVQLGYYFLSIAYRENNQLTEAEGALLDGIAVGGEIDYILYY
ELGNIMFNRGEGYYPLAIKYYSNSIKSRPNYDSALLNRANAYVQQGKITSKEKEYQKA
WDSYTMAIHDYSQFITLRSKTEKKDSILLIISYLRNEKINLEQLDKSLKGRTEHIVYA
KEDKNQILKDSFKDNLETNSLIELEKLNWQEELYIDE"
misc_feature 211090..211392
/locus_tag="BbuZS7_0213"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cl02429"
/db_xref="CDD:207591"
misc_feature order(211093..211098,211105..211110,211195..211200,
211204..211209,211216..211221,211300..211305,
211312..211317,211324..211329)
/locus_tag="BbuZS7_0213"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature order(211102..211104,211138..211140,211150..211152,
211159..211161,211204..211206,211240..211242,
211252..211254,211261..211263,211309..211311,
211351..211353,211363..211365,211372..211374)
/locus_tag="BbuZS7_0213"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature 211294..211503
/locus_tag="BbuZS7_0213"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
gene 211757..214771
/locus_tag="BbuZS7_0214"
/db_xref="GeneID:7106575"
CDS 211757..214771
/locus_tag="BbuZS7_0214"
/note="identified by match to protein family HMM PF00515;
match to protein family HMM PF01846; match to protein
family HMM PF07719"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374735.1"
/db_xref="GI:218249734"
/db_xref="GeneID:7106575"
/translation="MNKKHTNFSVLLLLIFLLILSFGGFGYYIYQSKLNDKNREIMLN
EVKNSVIDRNYKKAYSVAKLLQDKYPQNEDIAMLTNTLAEIANSSPFESKDLQRDSAN
QILDKIKGQDNTKTNVNENFDIAFNNRYIKDSTITENYSDRNDDIGIEDEDISEFKKS
KIPEKIKPNTNPKEEDQIIQSPNPKLSVNDQKNLFNLEKLKKNLSGKSNSENILNNSQ
KIENDKQNTNLSKEKNSENILKTPDNSKYSNNNNTTSLKKISSNSQKESELSPPSQTI
IGKIYRPYSYLIKKELYEILDDINTGRVTLGKNRLKELIKKGLSNKFQKVNELIENSK
NKEASNLLLTLIKKDIEPNLINIPKDPYKKEIFQLDKEDKKPQYLEDLKSKVHSIKPI
DLENTKSRQQAIKDLNEFLKNNPNDAQASKTLAQANKIQYLEDLKSKVHSIKPIDLEN
TKSRQQAIKDLNEFLKNNPNDAQASKTLAQANKIQYLEDLKSKVHSIKPIDLENTKSR
QQAIKDLNEFLKNNPNDAQASKTLAQANKIQYLEDLKSKVHSIKPIDLENTKSRQQAI
KDLNEFLKNNPNDAQASKTLAQANKIQHLEDLKSKVHSIKPIDLENTKSRQQAIKDLN
EFLKNNPNDAQASKTLAQAYENNGDLLKAENAYEKIIKLTNAQEDHYKLGIIRFKLKK
YEHSIESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESFEKAIQIDKNYGTAYYQ
KGIAEEKNGDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANA
KKPNEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA
ISLYSLVIEKNPENTSAYINLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYK
KEKNYQKAIEIFEKAIINSDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPEAL
HALGIIEYNENNNDQTLRELIKKFPNYKKNEI"
misc_feature 213605..213853
/locus_tag="BbuZS7_0214"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(213611..213613,213623..213625,213632..213634,
213677..213679,213713..213715,213725..213727,
213734..213736,213776..213778,213812..213814,
213824..213826,213833..213835)
/locus_tag="BbuZS7_0214"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature 213650..213850
/locus_tag="BbuZS7_0214"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature order(213668..213673,213677..213682,213689..213694,
213767..213772,213779..213784,213791..213796)
/locus_tag="BbuZS7_0214"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 213758..214057
/locus_tag="BbuZS7_0214"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(213758..213763,213767..213772,213779..213784,
213869..213874,213878..213883,213890..213895,
213971..213976,213983..213988,213995..214000)
/locus_tag="BbuZS7_0214"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 213764..213952
/locus_tag="BbuZS7_0214"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature order(213776..213778,213812..213814,213824..213826,
213833..213835,213878..213880,213914..213916,
213926..213928,213935..213937,213980..213982,
214016..214018,214028..214030,214037..214039)
/locus_tag="BbuZS7_0214"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature 213860..214054
/locus_tag="BbuZS7_0214"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature 214169..214429
/locus_tag="BbuZS7_0214"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(214169..214171,214175..214180,214187..214192,
214277..214282,214286..214291,214298..214303,
214379..214384,214391..214396,214403..214408)
/locus_tag="BbuZS7_0214"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 214175..214369
/locus_tag="BbuZS7_0214"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:205610"
misc_feature order(214184..214186,214220..214222,214232..214234,
214241..214243,214286..214288,214322..214324,
214334..214336,214343..214345,214388..214390,
214424..214426)
/locus_tag="BbuZS7_0214"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature 214493..214738
/locus_tag="BbuZS7_0214"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(214520..214522,214532..214534,214541..214543,
214580..214582,214616..214618,214628..214630,
214637..214639,214682..214684,214718..214720,
214730..214732)
/locus_tag="BbuZS7_0214"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature 214571..214753
/locus_tag="BbuZS7_0214"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:205610"
misc_feature order(214571..214576,214580..214585,214592..214597,
214673..214678,214685..214690,214697..214702)
/locus_tag="BbuZS7_0214"
/note="binding surface"
/db_xref="CDD:29151"
gene 214823..216625
/locus_tag="BbuZS7_0215"
/db_xref="GeneID:7106907"
CDS 214823..216625
/locus_tag="BbuZS7_0215"
/note="identified by match to protein family HMM PF01119;
match to protein family HMM PF02518; match to protein
family HMM PF08676; match to protein family HMM TIGR00585"
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein MutL"
/protein_id="YP_002374736.1"
/db_xref="GI:218249649"
/db_xref="GeneID:7106907"
/translation="MVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLVEGGIQK
ILIIDNGSGISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISIT
SSTTSNESYQIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMC
LKVLEEKIITHPEINFEINLNQKLRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHD
NIKIEIFLAPDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLF
LEINPEYIDFNVHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTED
DHLIEMTNQPENFNKINTYDIPQNNNLETEDVNEPNKNTTQSNIDLRRYNSIIQNRPT
LRENIGNIFSDNFLEFEEPPNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVH
EKIIYEKLRNSKKNVQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQ
LESIPNICSQYENTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFL
INEFFKLEIKHCPHGRKIYYKISKFELEKKVDRA"
misc_feature 214823..216619
/locus_tag="BbuZS7_0215"
/note="DNA mismatch repair enzyme (predicted ATPase) [DNA
replication, recombination, and repair]; Region: MutL;
COG0323"
/db_xref="CDD:30671"
misc_feature 214868..>215047
/locus_tag="BbuZS7_0215"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature 214892..214894
/locus_tag="BbuZS7_0215"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(214973..214975,214979..214981)
/locus_tag="BbuZS7_0215"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 215399..215743
/locus_tag="BbuZS7_0215"
/note="MutL_Trans: transducer domain, having a ribosomal
S5 domain 2-like fold, conserved in the C-terminal domain
of DNA mismatch repair (MutL/MLH1/PMS2) family. This
transducer domain is homologous to the second domain of
the DNA gyrase B subunit, which is...; Region: MutL_Trans;
cd00782"
/db_xref="CDD:48466"
misc_feature 215696..215698
/locus_tag="BbuZS7_0215"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:48466"
misc_feature 216095..216496
/locus_tag="BbuZS7_0215"
/note="MutL C terminal dimerisation domain; Region:
MutL_C; pfam08676"
/db_xref="CDD:192121"
gene 216644..217678
/locus_tag="BbuZS7_0216"
/db_xref="GeneID:7106109"
CDS 216644..217678
/locus_tag="BbuZS7_0216"
/note="identified by match to protein family HMM PF02414"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374737.1"
/db_xref="GI:218249318"
/db_xref="GeneID:7106109"
/translation="MMKKIKSEINLLKIEKDKNLIELGKILKNNNIVELKNLNHYPNL
KLVEKELYQMKSNLSKSEENENILKNLNKKIYILKKEYKSTSKSYKKNLKEIAKTIIE
IYPQNLELISKYNMNFSKLKLEKYKKIELASDHKTKNYLQRIMLEVSSTINNIINMIN
VYKISKEFEKQVFTKYYPSENFESIMNEFSLNKKLNNVIVKEFKIINEIKTNLKNIKE
EIKEIISTSKKEKIYKKNTIKNEINVITKNKENILKKIAEEFIEITKKDKMTAKTNAI
SSIIQKIEKINQKILNLNNDLIKITKQEEIKNIQQKIQALTKEKNKINNKLDALTSKI
EVIQNELDNE"
gene 217706..217782
/locus_tag="BbuZS7_0217"
/db_xref="GeneID:7106612"
tRNA 217706..217782
/locus_tag="BbuZS7_0217"
/product="tRNA-Met"
/db_xref="GeneID:7106612"
gene complement(217791..218444)
/locus_tag="BbuZS7_0218"
/db_xref="GeneID:7106695"
CDS complement(217791..218444)
/locus_tag="BbuZS7_0218"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_002374738.1"
/db_xref="GI:218249550"
/db_xref="GeneID:7106695"
/translation="MQSGLKIKLILFFCCFACSCDINYPEIKELDYKINYYFTENRVD
YSMSFDFAIKVINSKDVFKLSIENKNTNEFIQVINNNYSSFFIDSSLGKDILYCKDLR
FNFFDKTFEDFTSCVRLFDKGMRVYNRELVISLGMSKYDLDDVHNYVYKSKDMEMLNK
LSNSKVFFVKTYKDKLHPVSSVVRIDSIDILEIDKAFDNYISFYYVEKNSNLFFKVG"
gene complement(218422..219000)
/gene="efp"
/locus_tag="BbuZS7_0219"
/db_xref="GeneID:7106800"
CDS complement(218422..219000)
/gene="efp"
/locus_tag="BbuZS7_0219"
/note="identified by match to protein family HMM PF01132;
match to protein family HMM PF08207; match to protein
family HMM PF09285; match to protein family HMM TIGR00038"
/codon_start=1
/transl_table=11
/product="translation elongation factor P"
/protein_id="YP_002374739.1"
/db_xref="GI:218249231"
/db_xref="GeneID:7106800"
/translation="MAVVKSSEIEKGSFLLIKGAPHIVLEREFSKTGRGGAIVRLKLK
NLKNKFVIRETLKGADTAEAIEIYEVSAQYLYKDKDVLVFMDLETYDQVSLDLKESAN
LQDKVPFLQESEIYSLVTFDNVVIDIKLAPKIAFEVVEVEAAVKGDTVTNAMKNITLN
TGLVVKAPLFINVGDKVLINSETKEYAERIKN"
misc_feature complement(218428..218991)
/gene="efp"
/locus_tag="BbuZS7_0219"
/note="elongation factor P; Validated; Region: PRK00529"
/db_xref="CDD:179058"
misc_feature complement(218818..218988)
/gene="efp"
/locus_tag="BbuZS7_0219"
/note="Elongation factor P (EF-P) KOW-like domain; Region:
EFP_N; pfam08207"
/db_xref="CDD:203876"
misc_feature complement(218611..218796)
/gene="efp"
/locus_tag="BbuZS7_0219"
/note="S1_EF-P_repeat_1: Translation elongation factor P
(EF-P), S1-like RNA-binding domain, repeat 1. EF-P
stimulates the peptidyltransferase activity in the
prokaryotic 70S ribosome. EF-P enhances the synthesis of
certain dipeptides with...; Region: S1_EF-P_repeat_1;
cd04470"
/db_xref="CDD:88435"
misc_feature complement(order(218626..218631,218644..218646,
218728..218730))
/gene="efp"
/locus_tag="BbuZS7_0219"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88435"
misc_feature complement(218434..>218565)
/gene="efp"
/locus_tag="BbuZS7_0219"
/note="S1_EF-P_repeat_2: Translation elongation factor P
(EF-P), S1-like RNA-binding domain, repeat 1. EF-P
stimulates the peptidyltransferase activity in the
prokaryotic 70S ribosome. EF-P enhances the synthesis of
certain dipeptides with...; Region: S1_EF-P_repeat_2;
cd05794"
/db_xref="CDD:88469"
misc_feature complement(order(218443..218448,218461..218463,
218512..218514))
/gene="efp"
/locus_tag="BbuZS7_0219"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88469"
gene 219166..220005
/locus_tag="BbuZS7_0220"
/db_xref="GeneID:7106772"
CDS 219166..220005
/locus_tag="BbuZS7_0220"
/note="identified by match to protein family HMM PF01547"
/codon_start=1
/transl_table=11
/product="phosphate ABC transporter substrate-binding
protein"
/protein_id="YP_002374740.1"
/db_xref="GI:218249704"
/db_xref="GeneID:7106772"
/translation="MKKVIILIFMLSTSLLYNCKNQDNEKIVSIGGSTTVSPILDEMI
LRYNKINNNTKVTYDAQGSSVGINGLFNKIYKIAISSRDLTKEEIEQGAKETVFAYDA
LIFITSPEIKITNITEENLAKILNGEIQNWKQVGGPDAKINFINRDSSSGSYSSIKDL
LLNKIFKTHEEAQFRQDGIVVKSNGEVIEKTSLTPHSIGYIGLGYAKNSIEKGLNILS
VNSTYPTKETINSNKYTIKRNLIIVTNNKYEDKSVIQFIDFMTSSTGQDIVEEQGFLG
IKT"
misc_feature 219235..219996
/locus_tag="BbuZS7_0220"
/note="ABC-type phosphate transport system, periplasmic
component [Inorganic ion transport and metabolism];
Region: PstS; COG0226"
/db_xref="CDD:30575"
gene 220095..221003
/gene="pstC"
/locus_tag="BbuZS7_0221"
/db_xref="GeneID:7106877"
CDS 220095..221003
/gene="pstC"
/locus_tag="BbuZS7_0221"
/note="identified by match to protein family HMM PF00528;
match to protein family HMM TIGR02138"
/codon_start=1
/transl_table=11
/product="phosphate ABC transporter permease"
/protein_id="YP_002374741.1"
/db_xref="GI:218249655"
/db_xref="GeneID:7106877"
/translation="MHLSLKTKRKIIEIIFKSFILISAIISSLSILFLGLFILKTGIM
PFLNNKIKILNFLFSTNWDPTSNLQKSYGILAFIINSFLTTLFSILIALPIGLGFAIY
LLEKAKGFYRQFLQTVIELLAGIPSVVYGFFGSTFIAALVKNIFQREDNLGYNLISSS
LILSIMIIPTIISVCYSSLKAVPKSYKFASLALAATDWQTIYNIIIPSASRGILAGTI
LAIGRAIGETVAVLMVGGGSPLFIKNIFSPIRTLTVNIAMDMGYASGVHREALFSTAL
VLLLFSIITNLLKNFILSSNKGLKKK"
misc_feature 220212..220985
/gene="pstC"
/locus_tag="BbuZS7_0221"
/note="phosphate ABC transporter, permease protein PstC;
Region: phosphate_pstC; TIGR02138"
/db_xref="CDD:162724"
misc_feature 220326..220811
/gene="pstC"
/locus_tag="BbuZS7_0221"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(220374..220379,220386..220391,220404..220406,
220437..220448,220452..220481,220488..220493,
220497..220499,220587..220592,220596..220598,
220602..220604,220611..220616,220620..220622,
220632..220637,220644..220646,220695..220697,
220737..220742,220749..220751,220770..220781,
220788..220793)
/gene="pstC"
/locus_tag="BbuZS7_0221"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(220455..220499,220770..220787)
/gene="pstC"
/locus_tag="BbuZS7_0221"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(220497..220499,220572..220574,220788..220790)
/gene="pstC"
/locus_tag="BbuZS7_0221"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(220647..220685,220701..220706,220716..220718)
/gene="pstC"
/locus_tag="BbuZS7_0221"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
misc_feature <220659..220970
/gene="pstC"
/locus_tag="BbuZS7_0221"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cl00427"
/db_xref="CDD:211439"
gene 221108..222544
/locus_tag="BbuZS7_0222"
/db_xref="GeneID:7106115"
CDS 221108..222544
/locus_tag="BbuZS7_0222"
/note="identified by match to protein family HMM PF00528;
match to protein family HMM TIGR00974"
/codon_start=1
/transl_table=11
/product="phosphate ABC transporter permease"
/protein_id="YP_002374742.1"
/db_xref="GI:218249881"
/db_xref="GeneID:7106115"
/translation="MYNSLFYFKKKQTLFLNKTQSFVPFKTEDGKEIQIAFIVNKNIN
TDKISIEDIHNIYNNKISHWGSISDQGIDIIPIASSIDSISNKAILKTLIKNNVFNKR
YIKIEPSTKKILQTINSTIGSVGYLTKKEFESLDFKLYPNIKALKIKTMSVLISKKTL
TKNENEIINTLGVDEVEKLIKGKEKWVNLISKDIKLKIIKYLDQEENIIQTIEKTEGA
LAIVPWHYFQNFKAPFIKMHYVDKSSPLNLNFILSIPRDSGAYGGISYLILNTFYVIL
LTTAISICIGIGTGIMLAEYTSSKIFYKILSMSVDILSSIPAIIFGLFGLIFFVPILG
IGILSGAITSSLMILPMIVKTTEEAFKTIPKSYKYASFALGANKTETIIKVMVPAAIP
GILTGIVLAIGRALGETAVLLFTMGTNLGLATNLNEPSRTLTVHLLMLFQEGHLDKGF
GTASILVIMVLIINLTSKFLINKLYRIK"
misc_feature 221843..222541
/locus_tag="BbuZS7_0222"
/note="ABC-type phosphate transport system, permease
component [Inorganic ion transport and metabolism];
Region: PstA; COG0581"
/db_xref="CDD:30926"
misc_feature 221909..222496
/locus_tag="BbuZS7_0222"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(221957..221962,221969..221974,221987..221989,
222023..222034,222038..222067,222074..222079,
222083..222085,222143..222148,222152..222154,
222158..222160,222167..222172,222176..222178,
222188..222193,222200..222202,222251..222253,
222293..222298,222305..222307,222326..222337,
222344..222349,222413..222418,222446..222451,
222458..222463,222467..222472,222479..222484,
222491..222496)
/locus_tag="BbuZS7_0222"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(222041..222085,222326..222343)
/locus_tag="BbuZS7_0222"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(222083..222085,222128..222130,222344..222346,
222407..222409,222416..222418,222446..222448)
/locus_tag="BbuZS7_0222"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(222203..222241,222257..222262,222272..222274)
/locus_tag="BbuZS7_0222"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 222545..223327
/gene="pstB"
/locus_tag="BbuZS7_0223"
/db_xref="GeneID:7106340"
CDS 222545..223327
/gene="pstB"
/locus_tag="BbuZS7_0223"
/EC_number="3.6.3.27"
/note="ATP-binding protein; PstABCS is an ATP dependent
phosphate uptake system which is responsible for inorganic
phosphate uptake during phosphate starvation"
/codon_start=1
/transl_table=11
/product="phosphate ABC transporter ATP-binding protein"
/protein_id="YP_002374743.1"
/db_xref="GI:218249777"
/db_xref="GeneID:7106340"
/translation="MIKEKDTPKNEVIIETENLNLFYTDFKALNKINIKILKNSITAL
IGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQT
PNPFLMSIYDNISYGPKIHGTKDKRKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGG
QQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQA
GRISDRTAFFLNGCIEEESSTDELFFNPKNTKTEEYISGKFG"
misc_feature 222563..223324
/gene="pstB"
/locus_tag="BbuZS7_0223"
/note="phosphate ABC transporter ATP-binding protein;
Provisional; Region: PRK14273"
/db_xref="CDD:172761"
misc_feature 222584..223270
/gene="pstB"
/locus_tag="BbuZS7_0223"
/note="Phosphate uptake is of fundamental importance in
the cell physiology of bacteria because phosphate is
required as a nutrient. The Pst system of E. coli
comprises four distinct subunits encoded by the pstS,
pstA, pstB, and pstC genes. The PstS protein...; Region:
ABC_PstB_phosphate_transporter; cd03260"
/db_xref="CDD:73019"
misc_feature 222680..222703
/gene="pstB"
/locus_tag="BbuZS7_0223"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73019"
misc_feature order(222689..222694,222698..222706,222845..222847,
223085..223090,223181..223183)
/gene="pstB"
/locus_tag="BbuZS7_0223"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73019"
misc_feature 222836..222847
/gene="pstB"
/locus_tag="BbuZS7_0223"
/note="Q-loop/lid; other site"
/db_xref="CDD:73019"
misc_feature 223013..223042
/gene="pstB"
/locus_tag="BbuZS7_0223"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73019"
misc_feature 223073..223090
/gene="pstB"
/locus_tag="BbuZS7_0223"
/note="Walker B; other site"
/db_xref="CDD:73019"
misc_feature 223097..223108
/gene="pstB"
/locus_tag="BbuZS7_0223"
/note="D-loop; other site"
/db_xref="CDD:73019"
misc_feature 223169..223189
/gene="pstB"
/locus_tag="BbuZS7_0223"
/note="H-loop/switch region; other site"
/db_xref="CDD:73019"
gene complement(223330..224151)
/locus_tag="BbuZS7_0224"
/db_xref="GeneID:7106154"
CDS complement(223330..224151)
/locus_tag="BbuZS7_0224"
/note="identified by match to protein family HMM PF02535"
/codon_start=1
/transl_table=11
/product="zinc ABC transporter permease"
/protein_id="YP_002374744.1"
/db_xref="GI:218249275"
/db_xref="GeneID:7106154"
/translation="MIKSILDYLLTLHPVLLGLLGSTFTWFTTAFGAAAVFFFRKVDN
KIMDAMLGFSAGIMIAASFFSLIQPAIERAEELGYITWVPAVFGFLVGAFFIYIVDVF
VPDLDKLTFIDEDLTKHGKKDFLLFTAVTLHNFPEGLAVGVAFGALASNPDIQTLVGA
MLLTLGIGIQNIPEGAAISLPLRRGNVALAKCFNYGQMSGLVEIVGGLMGAYAVYSFT
RILPFALAFSAGAMIYVSIEQLIPEAKRKDIDNKVPSIFGVIGFTLMMFLDVSLG"
misc_feature complement(223333..224034)
/locus_tag="BbuZS7_0224"
/note="Predicted divalent heavy-metal cations transporter
[Inorganic ion transport and metabolism]; Region: COG0428"
/db_xref="CDD:30777"
misc_feature complement(223345..224034)
/locus_tag="BbuZS7_0224"
/note="ZIP Zinc transporter; Region: Zip; pfam02535"
/db_xref="CDD:202272"
gene complement(224192..225976)
/locus_tag="BbuZS7_0225"
/db_xref="GeneID:7106485"
CDS complement(224192..225976)
/locus_tag="BbuZS7_0225"
/note="catalyzes a two-step reaction, first charging an
alanine molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="alanyl-tRNA synthetase"
/protein_id="YP_002374745.1"
/db_xref="GI:218249169"
/db_xref="GeneID:7106485"
/translation="MTLNKLRKKYIDFFKSKKHFEIMGKSLVPENDPTVLFNTAGMQP
LIPYLLGEVHPSGDMLVNVQKCLRTGDIDEVGDLSHLTFFEMLGNWSLGAYFKEYSVK
CSFEFLTSSDYLNIPKDSLYVSVFEGDQEIPRDTETAKVWESLGISKDRIHYLSKDHN
FWGPVGSKGPCGPDTEIYVDTGKSKCSLDCNITCSCGKYFEIWNNVFMQYNKDENGNY
IELGRKCVDTGMGLERTIAFLQGKSSVYDTDAFMPIIKRIEYISGKIYGQKEDDDRCI
RIISDHVKAACFILADSSVVFPSNLGQGYVLRRLIRRSIRYAKKLGIKSHFLADLVDS
VEAIYRSFYNELTEKKDFIKKELSKEEEKFFKTLSQGEQEFIKITRNLPSKTIPGDIA
FKLYDTYGFPYEVTEELAIEYGFNVDKLGFDEHFKKHQKTSKKGGDKVFKGGLADYTY
ETTKLHTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFIHSEKMTDDEIKKVEEIV
NLQIKNSLSVKKIIMKLSEAREKGAMALFGEKYDDLVSVYEIDGFSLEVCGGPHVENT
NELGTFKIQKEQSSSSGIRRIKAILIDE"
misc_feature complement(224198..225976)
/locus_tag="BbuZS7_0225"
/note="alanyl-tRNA synthetase; Provisional; Region:
PRK01584"
/db_xref="CDD:179306"
misc_feature complement(225251..225970)
/locus_tag="BbuZS7_0225"
/note="Alanyl-tRNA synthetase (AlaRS) class II core
catalytic domain. AlaRS is a homodimer. It is responsible
for the attachment of alanine to the 3' OH group of ribose
of the appropriate tRNA. This domain is primarily
responsible for ATP-dependent formation of...; Region:
AlaRS_core; cd00673"
/db_xref="CDD:29811"
misc_feature complement(225902..225916)
/locus_tag="BbuZS7_0225"
/note="motif 1; other site"
/db_xref="CDD:29811"
misc_feature complement(order(225275..225277,225284..225289,
225299..225304,225359..225361,225371..225376,
225707..225715,225719..225721,225725..225727,
225773..225775,225827..225829,225833..225835))
/locus_tag="BbuZS7_0225"
/note="active site"
/db_xref="CDD:29811"
misc_feature complement(225770..225778)
/locus_tag="BbuZS7_0225"
/note="motif 2; other site"
/db_xref="CDD:29811"
misc_feature complement(225275..225292)
/locus_tag="BbuZS7_0225"
/note="motif 3; other site"
/db_xref="CDD:29811"
misc_feature complement(224216..224344)
/locus_tag="BbuZS7_0225"
/note="Threonyl and Alanyl tRNA synthetase second
additional domain; Region: tRNA_SAD; smart00863"
/db_xref="CDD:197931"
gene complement(225976..227193)
/locus_tag="BbuZS7_0226"
/db_xref="GeneID:7106706"
CDS complement(225976..227193)
/locus_tag="BbuZS7_0226"
/note="identified by match to protein family HMM PF01706"
/codon_start=1
/transl_table=11
/product="flagellar motor switch protein"
/protein_id="YP_002374746.1"
/db_xref="GI:218249280"
/db_xref="GeneID:7106706"
/translation="MQDPRLSKYKNAKNLSKKTVEEIDTLSLNKNFSDSEIQGSMLRS
WISLIKGNKNKTPVEPKSNNINELKPGFIRKESKVTKIAKYFLAIGLEKSAKIMSELD
DSDIILITREISKISYIAPEEKEHIIKEFEELLRNQKRYVKVDDNFAYELLNKTLGKS
KAKSIYKKVTGNDIFIPFDYLSQIEHEQLWALIKDENIKTLVILYNYLNKDQKKYVFS
MLEEEDRRKFVKDLVKPRQLSMETIEAISNKLKDRFKMQGNLKTDKLDGSKILVDILS
YMDFNEEKNLLNNINMRDLNPVVDSEIREKIFDINVILRIMDNDLHNILREFTDKEIA
IIIKDKADEVRDKMLSNVSKRRKEIILDEEAFLGKISKKDLKTMTTAFVNYIKNLTLK
GDLIIYRKNEEFI"
misc_feature complement(225979..226965)
/locus_tag="BbuZS7_0226"
/note="Flagellar motor switch protein [Cell motility and
secretion]; Region: FliG; COG1536"
/db_xref="CDD:31725"
misc_feature complement(226000..226323)
/locus_tag="BbuZS7_0226"
/note="FliG C-terminal domain; Region: FliG_C; pfam01706"
/db_xref="CDD:190075"
gene complement(227180..227887)
/locus_tag="BbuZS7_0227"
/db_xref="GeneID:7106490"
CDS complement(227180..227887)
/locus_tag="BbuZS7_0227"
/EC_number="3.1.1.31"
/codon_start=1
/transl_table=11
/product="6-phosphogluconolactonase"
/protein_id="YP_002374747.1"
/db_xref="GI:218249473"
/db_xref="GeneID:7106490"
/translation="MEFLYSDEENYLKDRFFDFFNMNIDKDKYTSIGICGGRSIVNFL
SVFLKQNFSFRRSHFFLVDERCVPLNDENSNYNLLNKNFFSKMVDKNLISISKFHAFV
YSEIDEATAIHDYNIEFNSRFNIFDFIIVSVGEDGHIASLFPSRKLLFSDVEGYQYEY
NSPKFPSKRISLTPKSLFGSKAVVLLFMGVDKKCALENFLASNSSINECPARLLKEHP
NLLVLTNIKRDESYAGS"
misc_feature complement(227234..227854)
/locus_tag="BbuZS7_0227"
/note="6PGL: 6-Phosphogluconolactonase (6PGL) subfamily;
6PGL catalyzes the second step of the oxidative phase of
the pentose phosphate pathway, the hydrolyzation of
6-phosphoglucono-1,5-lactone (delta form) to
6-phosphogluconate. 6PGL is thought to guard...; Region:
6PGL; cd01400"
/db_xref="CDD:73166"
misc_feature complement(order(227312..227314,227381..227383,
227474..227476,227693..227695,227771..227776))
/locus_tag="BbuZS7_0227"
/note="putative active site [active]"
/db_xref="CDD:73166"
gene complement(227908..228261)
/locus_tag="BbuZS7_0228"
/note="conserved hypothetical protein; this gene contains
a frame shift which may be the result of sequencing error"
/pseudo
/db_xref="GeneID:7106550"
gene complement(228230..228514)
/locus_tag="BbuZS7_0229"
/note="lipoprotein; this gene contains a frame shift which
may be the result of sequencing error"
/pseudo
/db_xref="GeneID:7106684"
gene 228583..229590
/locus_tag="BbuZS7_0230"
/db_xref="GeneID:7106639"
CDS 228583..229590
/locus_tag="BbuZS7_0230"
/note="identified by match to protein family HMM PF01207;
match to protein family HMM TIGR00742"
/codon_start=1
/transl_table=11
/product="tRNA-dihydrouridine synthase A"
/protein_id="YP_002374748.1"
/db_xref="GI:218249426"
/db_xref="GeneID:7106639"
/translation="MLMNRKISIAPMVNITDEHFRYLIRLLSKKVTLYTPMISAKSII
MGDVKKIVKQNPLESPIAIQIATNSKNDALKAIQILEKHFNFDEYNLNVGCPSLKIQN
ANCGACLMGNANQVGEILKTMKENTNKPISIKHRLGIRPLSSDYKNESYSEVKNFVKI
ISDFGIKNFIVHARIAILKGFSPKNNRNIPKLRHEFVYKLKKENKNLFIEINGGINNS
EQIKKHLSFVDSVMIGRSAFENPYFIANASREFLNETDEILTRKDILMQMVEYIKEYE
NYLSINILFKHLMGIVFSKEGAKKFRQNLTAPFPKNLKKHEILLKAIETLPEKILNSN
S"
misc_feature 228595..229566
/locus_tag="BbuZS7_0230"
/note="tRNA dihydrouridine synthase A; Region: yjbN;
TIGR00742"
/db_xref="CDD:129825"
misc_feature 228598..229335
/locus_tag="BbuZS7_0230"
/note="Dihydrouridine synthase-like (DUS-like) FMN-binding
domain. Members of this family catalyze the reduction of
the 5,6-double bond of a uridine residue on tRNA.
Dihydrouridine modification of tRNA is widely observed in
prokaryotes and eukaryotes, and also...; Region:
DUS_like_FMN; cd02801"
/db_xref="CDD:73368"
misc_feature order(228610..228618,228691..228693,228772..228774,
228856..228858,228982..228984,229096..229098,
229216..229218,229222..229224,229282..229287)
/locus_tag="BbuZS7_0230"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73368"
misc_feature order(228772..228774,228865..228870,228982..228984,
228988..228990,229093..229098,229102..229107,
229219..229224,229285..229287)
/locus_tag="BbuZS7_0230"
/note="active site"
/db_xref="CDD:73368"
misc_feature order(228865..228867,228988..228990,229096..229098,
229102..229104)
/locus_tag="BbuZS7_0230"
/note="catalytic residues [active]"
/db_xref="CDD:73368"
misc_feature order(228868..228870,228982..228984,229093..229095,
229105..229107,229219..229224)
/locus_tag="BbuZS7_0230"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73368"
gene complement(229580..230857)
/gene="serS"
/locus_tag="BbuZS7_0231"
/db_xref="GeneID:7106420"
CDS complement(229580..230857)
/gene="serS"
/locus_tag="BbuZS7_0231"
/EC_number="6.1.1.11"
/note="catalyzes a two-step reaction, first charging a
serine molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="seryl-tRNA synthetase"
/protein_id="YP_002374749.1"
/db_xref="GI:218249339"
/db_xref="GeneID:7106420"
/translation="MLDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITKI
GELNAKRNENSSKMQENLDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKV
PNILSPDVPIGSSEEDNFEIKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSK
FYYLKNEAVFLEIALINFSLNKLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYK
IEDTDKYLVGTSEITLGGYYYNKIIDLTLPIRMAGFSHCFRKEAGAYGQLSKGLYRVH
QFSKVEMFCFCKAEESGVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDI
EAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQNKFAHMVNGTAIATTRVI
ISILENFQDQKGGVRIPKSLVKYTGFDYIPFKN"
misc_feature complement(229610..230857)
/gene="serS"
/locus_tag="BbuZS7_0231"
/note="seryl-tRNA synthetase; Region: serS; TIGR00414"
/db_xref="CDD:161867"
misc_feature complement(230543..230857)
/gene="serS"
/locus_tag="BbuZS7_0231"
/note="Seryl-tRNA synthetase N-terminal domain; Region:
Seryl_tRNA_N; pfam02403"
/db_xref="CDD:202232"
misc_feature complement(229610..230506)
/gene="serS"
/locus_tag="BbuZS7_0231"
/note="Seryl-tRNA synthetase (SerRS) class II core
catalytic domain. SerRS is responsible for the attachment
of serine to the 3' OH group of ribose of the appropriate
tRNA. This domain It is primarily responsible for
ATP-dependent formation of the enzyme bound...; Region:
SerRS_core; cd00770"
/db_xref="CDD:29815"
misc_feature complement(order(229610..229615,230027..230029,
230090..230092,230135..230137,230147..230149,
230159..230161,230186..230188,230198..230200,
230204..230209,230264..230266,230270..230278,
230282..230293,230327..230329,230336..230338,
230342..230344,230348..230350,230360..230380,
230387..230404))
/gene="serS"
/locus_tag="BbuZS7_0231"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29815"
misc_feature complement(order(229688..229690,229706..229708,
229712..229714,229802..229813,230012..230014,
230018..230020,230024..230026,230033..230035,
230039..230041,230048..230050,230057..230059,
230075..230077,230081..230083,230165..230167,
230171..230173,230381..230383))
/gene="serS"
/locus_tag="BbuZS7_0231"
/note="active site"
/db_xref="CDD:29815"
misc_feature complement(230270..230293)
/gene="serS"
/locus_tag="BbuZS7_0231"
/note="motif 1; other site"
/db_xref="CDD:29815"
misc_feature complement(230075..230086)
/gene="serS"
/locus_tag="BbuZS7_0231"
/note="motif 2; other site"
/db_xref="CDD:29815"
misc_feature complement(order(229688..229690,229697..229705))
/gene="serS"
/locus_tag="BbuZS7_0231"
/note="motif 3; other site"
/db_xref="CDD:29815"
gene 230987..231688
/locus_tag="BbuZS7_0232"
/db_xref="GeneID:7106635"
CDS 230987..231688
/locus_tag="BbuZS7_0232"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374750.1"
/db_xref="GI:218249545"
/db_xref="GeneID:7106635"
/translation="MLNPRTIKTTFMLISTLMIFNGCTKKLTKINFKDISLNSNKMNS
LIINSISSKEESQFYEYNIRIPKLIIEGKEKGNLEELNNEINEYVSQIVARLDIVSKE
LKPENKKFSLKTNYEIYHGHNIYTIILIATQEINDSPITNYRSYYIQDKGNYIHNIDD
IIKTDEAFPFFIKKIKEKILPNELLFDLQQAVIYFENKKIIIKFPEYTFKLDDTEELP
NIFEFNESEIAQFVK"
gene 231704..234619
/locus_tag="BbuZS7_0233"
/db_xref="GeneID:7106795"
CDS 231704..234619
/locus_tag="BbuZS7_0233"
/EC_number="3.4.24.-"
/note="identified by match to protein family HMM PF05193;
match to protein family HMM PF08367"
/codon_start=1
/transl_table=11
/product="peptidase M16"
/protein_id="YP_002374751.1"
/db_xref="GI:218249617"
/db_xref="GeneID:7106795"
/translation="MKKKKIFKLISKTYLEEHDAEGYYFKHESGLEVFHLKSDSFKEN
AFCIAFKTIPSNNTGVAHVLEHTIFCGSSKYKIKDPFLYLLKGSLNTFLNAMTFPDKT
IYPAASTIEKDYFNLFNIYADSIFNPLLKKESFMQEGYNINPKDFKVSGIVFNEMKGS
YSNKNSLINEIVSSSLFEEGAYKYDSGGIPTNIIDLTYESFLDFYKKYYTLENCKIFL
CGNTQTEKNLNFIEKYIIRPYKKEKSNVNINIENVKRWEKGKKLTYKIPKENDNSLGV
YTINWLCTEINNIEDSIGLEILSEILLDDSCSFTINILKSGIGEDIAHISGINTDLKE
SIFSFGLQNVVENKEKEFKNLVFSELKNLVKNKIPKELIKGILFGYEFALKEEKGQNF
PIALMIKSFKGWLNGLHPIKTLQTSYYINEITNKLEKGIYYFENLIEKYLIFNNHYTL
ISFIPSHDTEKEMEEEIEKKLMAREIEIKQNPEEFLQFKKDYNQFKKYQNKKDSKADI
AKLPLLKIEDLPKQIEKSLDLNEIKELNLHSFKFKSNNIFNVNLFFKLDFLEKEDYIY
LSLFKRALQDLSTKNYSYININNKIQNTLGQINISESYDEDIDGNILNSFNISFKSFN
NKVKESFELIKEILININFHDYERLKEITLSLKNDFKSLLIPKGHLLAMLRSKSKLKL
NEYLKELQNGITGREFWQKAKTDTESLKEIANKLDNLKNKIISKNNLSALIMGNTDDI
LKNLENEFFNLKESLEESNNYNGLLNLDANSKALREIIIIQSKVAFNAICFPSYKIND
ENYPKANFLEHVLRSGIFWEKIRVMGGAYGASASIANGIFSFASYRDPNFTKTYQAFE
KSLEELANNKMTDDEIYTYLIGLIGTNIYVKTKATEALQSYRRKMLNISDSLRQDIRN
AYFTITPQDIKEISTKILTQIRQHNSIASLVNNQIYEEEKNNLEKLIGKEYSLKKIY"
misc_feature 231740..234616
/locus_tag="BbuZS7_0233"
/note="Predicted Zn-dependent peptidases, insulinase-like
[General function prediction only]; Region: COG1026"
/db_xref="CDD:31229"
misc_feature 231863..>232102
/locus_tag="BbuZS7_0233"
/note="Insulinase (Peptidase family M16); Region:
Peptidase_M16; pfam00675"
/db_xref="CDD:201385"
misc_feature 232286..232831
/locus_tag="BbuZS7_0233"
/note="Peptidase M16 inactive domain; Region:
Peptidase_M16_C; pfam05193"
/db_xref="CDD:203199"
misc_feature 233189..233785
/locus_tag="BbuZS7_0233"
/note="Peptidase M16C associated; Region: M16C_assoc;
pfam08367"
/db_xref="CDD:116948"
misc_feature 233915..234319
/locus_tag="BbuZS7_0233"
/note="Peptidase M16 inactive domain; Region:
Peptidase_M16_C; pfam05193"
/db_xref="CDD:203199"
gene complement(234655..234900)
/gene="rpmE2"
/locus_tag="BbuZS7_0234"
/db_xref="GeneID:7106076"
CDS complement(234655..234900)
/gene="rpmE2"
/locus_tag="BbuZS7_0234"
/note="RpmE2; there appears to be two types of ribosomal
proteins L31 in bacterial genomes; some contain a CxxC
motif while others do not; Bacillus subtilis has both
types; the proteins in this cluster do not have the CXXC
motif; RpmE is found in exponentially growing Bacilli
while YtiA was found after exponential growth; expression
of ytiA is controlled by a zinc-specific transcriptional
repressor; RpmE contains one zinc ion and a CxxC motif is
responsible for this binding; forms an RNP particle along
with proteins L5, L18, and L25 and 5S rRNA; found
crosslinked to L2 and L25 and EF-G; may be near the
peptidyltransferase site of the 50S ribosome"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L31 type B"
/protein_id="YP_002374752.1"
/db_xref="GI:218249589"
/db_xref="GeneID:7106076"
/translation="MRKDIHPKNNLVVFKDGSNGAMFLTKSTLNSKETIKYIDGKEYP
LITVEITSKSHPFYTGQQKFVDAAGRIDKFNKRYKKS"
misc_feature complement(234661..234900)
/gene="rpmE2"
/locus_tag="BbuZS7_0234"
/note="50S ribosomal protein L31 type B; Reviewed; Region:
rpmE2; PRK01678"
/db_xref="CDD:179318"
gene complement(234961..236508)
/gene="rho"
/locus_tag="BbuZS7_0235"
/db_xref="GeneID:7106840"
CDS complement(234961..236508)
/gene="rho"
/locus_tag="BbuZS7_0235"
/note="An RNA-DNA helicase that actively releases nascent
mRNAs from paused transcription complexes"
/codon_start=1
/transl_table=11
/product="transcription termination factor Rho"
/protein_id="YP_002374753.1"
/db_xref="GI:218249760"
/db_xref="GeneID:7106840"
/translation="MDKKNGGFDLESEIRRLDVSKEFKIEDNLKKKVVKVVAKKDSAS
SVTKSADLSGVKDSNGVIFPDFDYDIPSSGLENNIKTLEQSNIIKFFNGKDYVEIEKL
YDKPITEVRKIVEGLGTNHTIAVTMKKTELIFLLVKILSENNIDVLFTGVLDVLSDGY
GFLRTASNSYLSGGNDVYVSPSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSIN
DQDPTFAQNRIPFDNLTPLYPNMKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPK
AGKTTLLQKIANAITTNYSDVILMILLIDERPEEVTDMIRSVKGEVIASNFDEQASRH
VQVAEMVIEKAKRLVENKKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNALHKP
KRFFGSARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKSTGNMELILDRSLADRRLF
PAINIKKSGTRKEELLLSEEERSKILLIRRILGGVDDYEGVEVLIEKMKKSKNNEIFL
KTMSNGN"
misc_feature complement(234970..236220)
/gene="rho"
/locus_tag="BbuZS7_0235"
/note="transcription termination factor Rho; Region: rho;
TIGR00767"
/db_xref="CDD:162030"
misc_feature complement(235861..236064)
/gene="rho"
/locus_tag="BbuZS7_0235"
/note="Rho_CSD: Rho protein cold-shock domain (CSD). Rho
protein is a transcription termination factor in most
bacteria. In bacteria, there are two distinct mechanisms
for mRNA transcription termination. In intrinsic
termination, RNA polymerase and nascent mRNA...; Region:
Rho_CSD; cd04459"
/db_xref="CDD:88425"
misc_feature complement(order(235885..235893,235900..235902,
235975..235977,235981..235983,236017..236019,
236023..236025,236029..236031,236041..236043,
236047..236049))
/gene="rho"
/locus_tag="BbuZS7_0235"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88425"
misc_feature complement(235012..235758)
/gene="rho"
/locus_tag="BbuZS7_0235"
/note="Transcription termination factor rho is a bacterial
ATP-dependent RNA/DNA helicase. It is a homohexamer. Each
monomer consists of an N-terminal domain of the OB fold,
which is responsible for binding to cysteine rich
nucleotides. This alignment is of the...; Region:
rho_factor; cd01128"
/db_xref="CDD:29994"
misc_feature complement(order(235069..235071,235081..235083,
235123..235128,235198..235200,235204..235218,
235222..235227,235300..235302,235309..235311,
235318..235320,235327..235332,235339..235341,
235372..235374,235705..235707))
/gene="rho"
/locus_tag="BbuZS7_0235"
/note="multimer interface [polypeptide binding]; other
site"
/db_xref="CDD:29994"
misc_feature complement(235669..235692)
/gene="rho"
/locus_tag="BbuZS7_0235"
/note="Walker A motif; other site"
/db_xref="CDD:29994"
misc_feature complement(order(235159..235161,235666..235677,
235681..235683))
/gene="rho"
/locus_tag="BbuZS7_0235"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29994"
misc_feature complement(235429..235443)
/gene="rho"
/locus_tag="BbuZS7_0235"
/note="Walker B motif; other site"
/db_xref="CDD:29994"
gene complement(236588..236995)
/locus_tag="BbuZS7_0236"
/db_xref="GeneID:7106933"
CDS complement(236588..236995)
/locus_tag="BbuZS7_0236"
/note="identified by match to protein family HMM PF04519"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374754.1"
/db_xref="GI:218249860"
/db_xref="GeneID:7106933"
/translation="MPVNIVDSYKWDCKLDSSLTFRGKLKFEGTLYLDSSFEGEISSK
GGVLFIGKNSKVITNVVICDTLIVEGILKGNVNAASKVYLNSGCKIYGDVKTKKIFIN
DNIIFDGKCEMIKSNEIVDLFSFTVSQIKDTLQ"
misc_feature complement(236657..236965)
/locus_tag="BbuZS7_0236"
/note="Polymer-forming cytoskeletal; Region: Bactofilin;
pfam04519"
/db_xref="CDD:203037"
gene complement(236996..237322)
/gene="hbb"
/locus_tag="BbuZS7_0237"
/db_xref="GeneID:7106320"
CDS complement(236996..237322)
/gene="hbb"
/locus_tag="BbuZS7_0237"
/note="identified by match to protein family HMM PF00216"
/codon_start=1
/transl_table=11
/product="small DNA-binding protein Hbb"
/protein_id="YP_002374755.1"
/db_xref="GI:218249932"
/db_xref="GeneID:7106320"
/translation="MSFSRRPKVTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEE
LKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKER
VWGIKG"
misc_feature complement(237017..237295)
/gene="hbb"
/locus_tag="BbuZS7_0237"
/note="Integration host factor (IHF) and HU are small
heterodimeric members of the DNABII protein family that
bind and bend DNA, functioning as architectural factors in
many cellular processes including transcription,
site-specific recombination, and...; Region: HU_IHF;
cd00591"
/db_xref="CDD:29683"
misc_feature complement(order(237017..237019,237038..237040,
237044..237046,237056..237061,237128..237130,
237143..237148,237155..237169,237179..237184,
237191..237196,237203..237205,237260..237262,
237272..237274,237281..237283,237290..237295))
/gene="hbb"
/locus_tag="BbuZS7_0237"
/note="IHF dimer interface [polypeptide binding]; other
site"
/db_xref="CDD:29683"
misc_feature complement(order(237032..237034,237041..237043,
237047..237049,237059..237061,237089..237100,
237110..237112,237116..237121,237125..237127,
237137..237139,237146..237151,237155..237157,
237161..237163,237206..237208,237287..237295))
/gene="hbb"
/locus_tag="BbuZS7_0237"
/note="IHF - DNA interface [nucleotide binding]; other
site"
/db_xref="CDD:29683"
gene complement(237335..237592)
/gene="rpsT"
/locus_tag="BbuZS7_0238"
/db_xref="GeneID:7106238"
CDS complement(237335..237592)
/gene="rpsT"
/locus_tag="BbuZS7_0238"
/note="binds directly to the 16S rRNA and is involved in
post-translational inhibition of arginine and ornithine
decarboxylase"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S20"
/protein_id="YP_002374756.1"
/db_xref="GI:218249167"
/db_xref="GeneID:7106238"
/translation="MRKNASALKRSRQNLKRKIRNVSVKSELKTIEKRCINMIKAGKK
DEAIEFFKFVAKKLDTAARKRIIHKNKAARKKSRLNVLLLK"
misc_feature complement(237344..237592)
/gene="rpsT"
/locus_tag="BbuZS7_0238"
/note="30S ribosomal protein S20; Reviewed; Region: rpsT;
PRK00239"
/db_xref="CDD:178943"
gene complement(237667..238494)
/locus_tag="BbuZS7_0239"
/db_xref="GeneID:7106704"
CDS complement(237667..238494)
/locus_tag="BbuZS7_0239"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374757.1"
/db_xref="GI:218249958"
/db_xref="GeneID:7106704"
/translation="MRDLFFNNVKLISLFVFNVVICLLYLGFYDASFFYFVLALLLVN
FFVIFFYLRYFYSISFKGSKIYYKGIFLSYNFDFSDIISFEKRLSDNVLILQLKNKKK
IKVCFWTGNGSSELFKELKIKRKDLFVPKLENFPIRYYLSCTYLFMFLARIMIALFVY
YISLSNMFIFLFICFIDIKVLLEDFSVISNIVLFYEFRKDSICERKIFKSEIYFYEFF
EKIFIAREFEFNNKNYLCFLYKENHQTKKVYILNKKISYSMQKVFEYINQNYCTELT"
gene complement(238510..239616)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/db_xref="GeneID:7106264"
CDS complement(238510..239616)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="translation-associated GTPase; the crystal
structure of the Haemophilus influenzae YchF protein
showed similarity to the yeast structure (PDB: 1NI3);
fluorescence spectroscopy revealed nucleic acid binding;
the yeast protein YBR025c interacts with the translation
elongation factor eEF1"
/codon_start=1
/transl_table=11
/product="GTP-dependent nucleic acid-binding protein EngD"
/protein_id="YP_002374758.1"
/db_xref="GI:218249513"
/db_xref="GeneID:7106264"
/translation="MRLNAGIVGLPNVGKSTLFSSLTSSNVEIANYPFCTIEPNIGIV
EIPDERLLKISECIIPRKIIPAVMEFVDIAGLVKGASTGEGLGNKFLANIREVSLIVH
VIRCFEEKEVIHINDDINPEKDITTINVELCLSDLETVQKSLQKQEKNAKSTDKKISE
SSKAIVLMLKRLEDHLSNMNPAVEFKFDDFEYNFIRSLNLLTFKKVLYVCNVDENSLS
GNKYTDIVKNIALKEGNDFLILCAKIEAELAQIKDISYKNEMLKLFGINDSGLGNLIK
KAYYTLGLRTYFTAGLQEVRAWTFKQGMRAPKAAGIIHSDFERGFIKAEVYSCEDLFK
FQSVQKLKEKGLVRIEGKEYIVRDGDVIFFKFNV"
misc_feature complement(238513..239616)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="GTP-binding protein YchF; Reviewed; Region:
PRK09601"
/db_xref="CDD:181981"
misc_feature complement(238771..239604)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="YchF GTPase; Region: YchF; cd01900"
/db_xref="CDD:206687"
misc_feature complement(239569..239592)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="G1 box; other site"
/db_xref="CDD:206687"
misc_feature complement(order(238888..238896,238975..238977,
238981..238986,239566..239577,239581..239583))
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206687"
misc_feature complement(239500..239523)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="Switch I region; other site"
/db_xref="CDD:206687"
misc_feature complement(239509..239511)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="G2 box; other site"
/db_xref="CDD:206687"
misc_feature complement(order(239329..239358,239377..239406))
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="Switch II region; other site"
/db_xref="CDD:206687"
misc_feature complement(239392..239403)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="G3 box; other site"
/db_xref="CDD:206687"
misc_feature complement(238975..238986)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="G4 box; other site"
/db_xref="CDD:206687"
misc_feature complement(238888..238896)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="G5 box; other site"
/db_xref="CDD:206687"
misc_feature complement(238519..238767)
/gene="ychF"
/locus_tag="BbuZS7_0240"
/note="TGS_YchF_C: This subfamily represents TGS
domain-containing YchF GTP-binding protein, a universally
conserved GTPase whose function is unknown. The N-terminal
domain of the YchF protein belongs to the Obg-like family
of GTPases, and some members of the...; Region:
TGS_YchF_C; cd04867"
/db_xref="CDD:133440"
gene complement(239649..241655)
/locus_tag="BbuZS7_0241"
/db_xref="GeneID:7106590"
CDS complement(239649..241655)
/locus_tag="BbuZS7_0241"
/note="identified by match to protein family HMM PF01436"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374759.1"
/db_xref="GI:218249288"
/db_xref="GeneID:7106590"
/translation="MLIFGFIGLFFLNIFSLHAQGIVTNKDAQEEFKWALNSYNNGIY
DDALLSFKKILSFDPNNLDYHFWTGNVYYRLGYVEEALMEWRNLKDQGYKVPYLRHLI
STIEQRRGIFSNYELNFKKLVKVASLDNSIYKRPHGYQITSLRADKYGGYYAANFVGN
EILYFDVNNNVNALVKDGFSYLKSPYDVIEANNLLYVTLYSSDEIGVYDKVLGVKRKS
IGKKGTKDGELLAPQYMTIDKRNYIYVSEWGNKRVSKFGLEGDFILHFGSRTSGYKGL
LGPTGVTYLNENIYVADSLRNTIEVFDTSGNHLYSVFTSIEGIEGLSSDFVGNNVIVS
SKDGVYKYSIAKKTITKILKADKMNSKISSSILDANNQMIVSDFNNAKVSVYKSDASL
YDSLNVDVRRIIRLGGPKIYVELNVSSKSGLPVVGLKSENFSISNENYYIVNPKVAYN
VNASKDINIAVVFDKSSYMKKYDTDQIVGLNALMELSKNKNFSFINATSVPIIDNIES
LTNSIRNTSSLGPYSTDAVKTDVSLKLAGSGLMSKSSRRAVVYFSGGILNRKAFEKYS
LDTIVSYYKNNDIRFYLILFGNDPINSKLQYLVNETGGAVIPFSSYEGVSKVYDLILE
QKTGTYLLEYYYPGPQEPNKYFNLSVEANINQQTGRGEFAYFIN"
misc_feature complement(241398..241580)
/locus_tag="BbuZS7_0241"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(241410..>241553)
/locus_tag="BbuZS7_0241"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cl02429"
/db_xref="CDD:207591"
misc_feature complement(order(241413..241415,241449..241451,
241494..241496,241503..241505,241515..241517,
241551..241553))
/locus_tag="BbuZS7_0241"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(order(241431..241436,241443..241448,
241455..241460,241536..241541,241548..241553))
/locus_tag="BbuZS7_0241"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(<240630..241199)
/locus_tag="BbuZS7_0241"
/note="3-carboxymuconate cyclase [Carbohydrate transport
and metabolism]; Region: COG2706"
/db_xref="CDD:32605"
misc_feature complement(239697..240419)
/locus_tag="BbuZS7_0241"
/note="VWFA-related Acidobacterial domain; Region:
acidobact_VWFA; TIGR03436"
/db_xref="CDD:163263"
misc_feature complement(239790..240284)
/locus_tag="BbuZS7_0241"
/note="von Willebrand factor type A domain; Region: VWA_2;
pfam13519"
/db_xref="CDD:205697"
gene complement(242985..243239)
/locus_tag="BbuZS7_0242"
/db_xref="GeneID:7106498"
CDS complement(242985..243239)
/locus_tag="BbuZS7_0242"
/note="identified by glimmer"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374760.1"
/db_xref="GI:218249518"
/db_xref="GeneID:7106498"
/translation="MVVNVGDSFTVDNRYPFLKVSNFLMVSPYSLMVAVIPEFVALIV
LIPFSMLLNLATTKCCHSAEFVFDQESFEKFTNILAPWVL"
gene complement(243309..244091)
/locus_tag="BbuZS7_0243"
/db_xref="GeneID:7106595"
CDS complement(243309..244091)
/locus_tag="BbuZS7_0243"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374761.1"
/db_xref="GI:218249381"
/db_xref="GeneID:7106595"
/translation="MEVLMRRLFLLYILCSFVFLNLFAQGSSSYIDKQKELAIFYYEV
GQRYINVGKIKKGKLFQAKALKIYPDLKKGFDIKLAVKELDARIKDDNPKVVMLEDIK
LEEIPGIVHEKIEINDFTNAPKIEYIAQRERSKNQDKIIKFQFGKFARALISRNFDLF
DSVIADKVNVMGQFESKNDFISTLSSASSKADANELEYLSVDDYYDLKSLKISKSNDT
SFAVNVNAKKNDVTKNFPFWKERQTLIFTTEDDNNWFLSSIN"
gene complement(244143..244748)
/locus_tag="BbuZS7_0244"
/db_xref="GeneID:7106678"
CDS complement(244143..244748)
/locus_tag="BbuZS7_0244"
/note="identified by match to protein family HMM PF01712"
/codon_start=1
/transl_table=11
/product="deoxyguanosine/deoxyadenosine kinase"
/protein_id="YP_002374762.1"
/db_xref="GI:218249730"
/db_xref="GeneID:7106678"
/translation="MVIVIEGLIGVGKTTLGNILSKELEVPFYSELNNDFTLAVLDKF
YKDKSRWAFPVQINFLNERFKLIKGVFRTKGGILDRSIYGDCVFASLLNCDGHISDEE
YKIYIDLLDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLEGLNRKY
LKWYDEYNLSSKIKFSYDNINIFSEEDRNKVISLIRDKLVL"
misc_feature complement(244146..244748)
/locus_tag="BbuZS7_0244"
/note="Deoxynucleoside kinases [Nucleotide transport and
metabolism]; Region: COG1428"
/db_xref="CDD:31617"
misc_feature complement(244200..244745)
/locus_tag="BbuZS7_0244"
/note="Deoxyribonucleoside kinase (dNK) catalyzes the
phosphorylation of deoxyribonucleosides to yield
corresponding monophosphates (dNMPs). This family consists
of various deoxynucleoside kinases including deoxyribo-
cytidine (EC 2.7.1.74), guanosine (EC 2.7.1; Region: dNK;
cd01673"
/db_xref="CDD:30191"
misc_feature complement(order(244314..244316,244329..244331,
244482..244484,244581..244586,244614..244616,
244707..244712,244716..244718))
/locus_tag="BbuZS7_0244"
/note="Substrate-binding site [chemical binding]; other
site"
/db_xref="CDD:30191"
misc_feature complement(244560..244562)
/locus_tag="BbuZS7_0244"
/note="Substrate specificity [chemical binding]; other
site"
/db_xref="CDD:30191"
gene 245155..245919
/locus_tag="BbuZS7_0245"
/db_xref="GeneID:7106903"
CDS 245155..245919
/locus_tag="BbuZS7_0245"
/note="identified by match to protein family HMM PF00230;
match to protein family HMM TIGR00861"
/codon_start=1
/transl_table=11
/product="glycerol uptake facilitator"
/protein_id="YP_002374763.1"
/db_xref="GI:218249667"
/db_xref="GeneID:7106903"
/translation="MNYTKFQEFISEFLGTFILLALGTGSVAMTVLFSSSPEIPGEII
KGGYTNIVFGWGLGVTFGIYTAARMSGAHLNPAVSIGLASVGKFPVSKLLHYIVAQIL
GAFTGALMTLVVFYPKWIEMDPGLENTQGIMATFPAVPGFLPGFIDQIFGTFLLMFLI
SVVGDFTKKHSDNPFIPFIVGAVVLSIGISFGGMNGYAINPARDLGPRILLLFAGFKN
HGFNNLSIVIVPIIGPIIGAILGATIYEFTLKNNKD"
misc_feature 245173..245787
/locus_tag="BbuZS7_0245"
/note="Major intrinsic protein (MIP) superfamily. Members
of the MIP superfamily function as membrane channels that
selectively transport water, small neutral molecules, and
ions out of and between cells. The channel proteins share
a common fold: the N-terminal...; Region: MIP; cd00333"
/db_xref="CDD:29423"
misc_feature order(245317..245319,245371..245379,245740..245745,
245752..245754,245761..245763)
/locus_tag="BbuZS7_0245"
/note="amphipathic channel; other site"
/db_xref="CDD:29423"
misc_feature order(245377..245385,245752..245760)
/locus_tag="BbuZS7_0245"
/note="Asn-Pro-Ala signature motifs; other site"
/db_xref="CDD:29423"
gene 245962..247467
/gene="glpK"
/locus_tag="BbuZS7_0246"
/db_xref="GeneID:7106127"
CDS 245962..247467
/gene="glpK"
/locus_tag="BbuZS7_0246"
/EC_number="2.7.1.30"
/note="identified by match to protein family HMM PF00370;
match to protein family HMM PF02782; match to protein
family HMM TIGR01311"
/codon_start=1
/transl_table=11
/product="glycerol kinase"
/protein_id="YP_002374764.1"
/db_xref="GI:218249961"
/db_xref="GeneID:7106127"
/translation="MKYILSIDQGTTSSRAMVFDKNANIKGFAQKEFTQIYPQPSWVE
HDPTEIWGSQLGVITEAMANARILPNEIDAIGITNQRETTVIWEKNTGKPIYNAIVWQ
DRRTAKICDQLKKEGKDKIILEKTGLVLDSYFSGTKIMWILDNVEGARQRAENGELCF
GTIDTWILWNLTQKKEHATDYSNASRTLLLNIKTLEWDDELLSILNVPRAILPELKES
STIYGKTDKALFGAEIPIAGIAGDQFAATFGQACLKKGMAKNTYGTGCFLTVNIGKEP
IISHDKLLTSIAWGRKKSVTYVLEGSVFIGGAVIQWLRDGLEFFRKSSDAEALASSVS
DNGGVYFVPAFVGLGAPHWDSYARGTIIGITRGSTKAHITRAALESIAFQSFDILNTM
KKSIPNFEIQELRVDGGASQNNLLMQFQADLLECKVVRPKITETTALGAAYLAGLATG
YWQSAEEIVSLWQVDKIFEPSMPKNQKEKLLENWNKAVGKAKSWIQNSHSS"
misc_feature 245965..247443
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="glycerol kinase; Provisional; Region: glpK;
PRK00047"
/db_xref="CDD:178821"
misc_feature 245968..247428
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="Escherichia coli glycerol kinase-like proteins;
belongs to the FGGY family of carbohydrate kinases;
Region: FGGY_EcGK_like; cd07786"
/db_xref="CDD:198361"
misc_feature order(245968..245973,245977..245979,245983..245985,
245992..245997,246004..246006,246010..246012,
246016..246021,246028..246030,246034..246036,
246082..246084,246178..246204,246262..246267,
246271..246273,246280..246282,246292..246294,
246328..246330,246337..246348,246352..246354,
246358..246363,246502..246507,246514..246519,
246535..246540,246544..246546,246610..246621,
246670..246675,246691..246696,246751..246753,
246760..246762,246787..246789,246793..246795,
246811..246831,246844..246846,246850..246852,
246859..246861,246865..246867,246871..246876,
246892..246894,246997..246999,247018..247020,
247024..247029,247033..247035,247264..247266,
247270..247278,247282..247287,247291..247308,
247312..247317)
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="N- and C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:198361"
misc_feature order(245983..245985,245989..245997,246004..246006,
246199..246207,246262..246264,246358..246360,
246685..246690,246745..246753,246760..246762,
246880..246885,246889..246894,246928..246933,
246937..246939,247183..247191,247198..247200)
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="active site"
/db_xref="CDD:198361"
misc_feature order(245983..245985,245989..245997,246004..246006,
246745..246753,246880..246885,246889..246894,
246928..246933,246937..246939,247183..247191,
247198..247200)
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="MgATP binding site [chemical binding]; other site"
/db_xref="CDD:198361"
misc_feature order(245983..245985,245992..245994,246685..246687)
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="catalytic site [active]"
/db_xref="CDD:198361"
misc_feature order(245983..245985,246685..246687)
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:198361"
misc_feature order(245992..245994,246199..246207,246262..246264,
246358..246360,246685..246690,246760..246762)
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="glycerol binding site [chemical binding]; other
site"
/db_xref="CDD:198361"
misc_feature order(246052..246054,246103..246105,246112..246117,
246127..246129,246136..246141,246238..246240,
246469..246471,246478..246480,246637..246642)
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:198361"
misc_feature order(246070..246072,246079..246081,246088..246090,
246265..246267,246874..246876,246883..246885,
246892..246897,246904..246906,246973..246975,
246979..246981,246994..246996,247033..247059,
247069..247071,247078..247080)
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:198361"
misc_feature order(246649..246654,246658..246660)
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="FBP binding site [chemical binding]; other site"
/db_xref="CDD:198361"
misc_feature order(247159..247161,247165..247167,247369..247371,
247375..247377,247381..247392,247396..247398)
/gene="glpK"
/locus_tag="BbuZS7_0246"
/note="protein IIAGlc interface [polypeptide binding];
other site"
/db_xref="CDD:198361"
gene 247647..247799
/locus_tag="BbuZS7_0247"
/db_xref="GeneID:7106267"
CDS 247647..247799
/locus_tag="BbuZS7_0247"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374765.1"
/db_xref="GI:218249664"
/db_xref="GeneID:7106267"
/translation="MYSKNKLSKPFEKVKFIGAIQKMINNILNLKKNHKKLKNLPVQL
VYSAIQ"
gene 247892..249454
/locus_tag="BbuZS7_0248"
/db_xref="GeneID:7106124"
CDS 247892..249454
/locus_tag="BbuZS7_0248"
/note="identified by match to protein family HMM PF01266"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate dehydrogenase"
/protein_id="YP_002374766.1"
/db_xref="GI:218249917"
/db_xref="GeneID:7106124"
/translation="MNNNKETKLKDLENQEFDLIIIGGGATGLGIAVDAITRGYKAIL
IEKFDYAKGTSSRSSKLIHGGVRYLAQWNISLVKEALHEKAILEKNAPHLINECALIT
PIYNVLEIPYYYFGLSYYHNLMGKEKTTKYKTKLLSKKSTIEKAPNIKTEGLKCSVLY
YDDSFDDARMAITLLRTFAEKGGIALNYTELKKFNKENGKLSGVLIQNKLSKEQISLK
SKCIINATGIFSDEIRRLDDEKALNIIKPSQGSHLVVKKDKFPKNHAILIPKTSDNRI
LFAIPWYDSVVCGSTDIPIKEIEEEPKRFEEEIDFIINNLNNYLNIKIEKSDVKSVYT
GIRPLIMDPKAQGNTSKISRNEKIFISDSNLITIAGGKYTTYRKMAEKTLLKAIEQNL
IPNRAPTTEDLKLHGYLKKEEAMKIPEPFRAYGSDFEILKNMEGFDKKIHENLDLNEA
QIDFSIKFEQAKTIEDVLARRTRSLPLNPQATIEAAPRVAEIMMEKLNKSEEWKNEQI
KNFLEISKKYLI"
misc_feature 247904..249451
/locus_tag="BbuZS7_0248"
/note="Glycerol-3-phosphate dehydrogenase [Energy
production and conversion]; Region: GlpA; COG0578"
/db_xref="CDD:30923"
gene complement(249541..250035)
/locus_tag="BbuZS7_0249"
/db_xref="GeneID:7106377"
CDS complement(249541..250035)
/locus_tag="BbuZS7_0249"
/note="identified by match to protein family HMM PF03885"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374767.1"
/db_xref="GI:218249584"
/db_xref="GeneID:7106377"
/translation="MKVNNLIAGALNLNSKDYKKSGKKVSFDKNNLFSSIFQAESVKE
DKHFILLENGEFNLDLIKSMLDGINETGERLLSEPSRQNVIFYKKVISEFISIIISSS
VCLKEQKGGNLGDPKRPKYRIIKIINDKLDKLAYSVLQNQMTQIKLLDSIEEIQGLLV
NLLM"
misc_feature complement(249544..250035)
/locus_tag="BbuZS7_0249"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG1728"
/db_xref="CDD:31914"
gene complement(250022..250576)
/locus_tag="BbuZS7_0250"
/db_xref="GeneID:7106835"
CDS complement(250022..250576)
/locus_tag="BbuZS7_0250"
/note="identified by match to protein family HMM PF04519"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374768.1"
/db_xref="GI:218249242"
/db_xref="GeneID:7106835"
/translation="MLNFLTVKKERKAPSLFIFDEIKTIVGVGDFFKGDLVSNNFIRL
DGDFIGTISSTKRVIIGESGRVKSSIDANELVISGMVVGNIYAKSKIKIFASGCVIGN
ISCKSIEVEEGAIIDGYMDIGAEYLRAPERNTFFYTGSYKVNEDLLIEINKVHQEEKK
SFQLLEGKDDKYFSSVVNKIDESK"
misc_feature complement(250178..250576)
/locus_tag="BbuZS7_0250"
/note="Integral membrane protein CcmA involved in cell
shape determination [Cell envelope biogenesis, outer
membrane]; Region: CcmA; COG1664"
/db_xref="CDD:31850"
gene complement(250577..251602)
/locus_tag="BbuZS7_0251"
/db_xref="GeneID:7106451"
CDS complement(250577..251602)
/locus_tag="BbuZS7_0251"
/note="identified by match to protein family HMM PF01551"
/codon_start=1
/transl_table=11
/product="peptidase M23"
/protein_id="YP_002374769.1"
/db_xref="GI:218249345"
/db_xref="GeneID:7106451"
/translation="MKKRIRFKIILGFKGILKFFLAIYNSLFIVLKAIHSFFKQNISF
IVIPHVKGNVKNIKISFLTLFFFSTFFLGGFIGFVLLAVNYVTLSSIVKSTEKNYSLA
ESEIEDFRNTVVEINSVAKNFSKVLDELKTSLKINSNGVDLNKNKLDGDLSDFIDLQI
LEANSIKELSDLKNIKSKIESSIPPLKSIVKVLHAQDKLLNDIPSLWPLAGGSGIITL
HFGPAIEPFTRQWYIHKGIDLGGVRIGTPIVATADGEVVRASYQSAGYGNFVQIKHKY
GLATLYAHMSRLNTSKGSYVKKGQIIGFMGQTGYATGPHVHYEVRVGSQVINPDMYLN
LATGASK"
misc_feature complement(250580..>251020)
/locus_tag="BbuZS7_0251"
/note="Membrane proteins related to metalloendopeptidases
[Cell envelope biogenesis, outer membrane]; Region: NlpD;
COG0739"
/db_xref="CDD:31082"
misc_feature complement(250616..250909)
/locus_tag="BbuZS7_0251"
/note="Peptidase family M23; Region: Peptidase_M23;
pfam01551"
/db_xref="CDD:201854"
gene 251799..252404
/locus_tag="BbuZS7_0252"
/db_xref="GeneID:7106642"
CDS 251799..252404
/locus_tag="BbuZS7_0252"
/note="HAM1-like protein; Rec-dependent growth; RgdB;
yggV; it is suspected that this protein functions to
remove misincorporated bases such as xanthine or
hypoxanthine"
/codon_start=1
/transl_table=11
/product="deoxyribonucleotide triphosphate
pyrophosphatase"
/protein_id="YP_002374770.1"
/db_xref="GI:218249462"
/db_xref="GeneID:7106642"
/translation="MKTLFFATTNENKINEVKNILDIPNLNLIVPQNFNIKETGKTFK
ENSLLKAKALFEILNNNQNVFGEDSGLCIEALNLEPGIYSKRYDTYKLCKKLSTNEKN
QLILDLMKNEKNRKAYFICNISYISKNGQILNFEGIIKGKIALSLNDKKNYGFGYDSI
FLTKNNKKLSDLTLEEKNKISHRGIAFLKFKKFLLKSLFNS"
misc_feature 251808..252356
/locus_tag="BbuZS7_0252"
/note="NTPase/HAM1. This family consists of the HAM1
protein and pyrophosphate-releasing xanthosine/ inosine
triphosphatase. HAM1 protects the cell against mutagenesis
by the base analog 6-N-hydroxylaminopurine (HAP) in E.
Coli and S. cerevisiae. A...; Region: HAM1; cd00515"
/db_xref="CDD:29953"
misc_feature order(251826..251828,251832..251837,251844..251846,
252003..252011,252048..252053,252153..252155,
252261..252263,252267..252272,252342..252347)
/locus_tag="BbuZS7_0252"
/note="active site"
/db_xref="CDD:29953"
misc_feature order(251910..251918,252024..252029,252036..252038,
252045..252047,252054..252056)
/locus_tag="BbuZS7_0252"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29953"
gene 252524..254296
/gene="pepF"
/locus_tag="BbuZS7_0253"
/db_xref="GeneID:7106538"
CDS 252524..254296
/gene="pepF"
/locus_tag="BbuZS7_0253"
/EC_number="3.4.24.-"
/note="identified by match to protein family HMM PF01432;
match to protein family HMM PF08439; match to protein
family HMM TIGR00181"
/codon_start=1
/transl_table=11
/product="oligoendopeptidase F"
/protein_id="YP_002374771.1"
/db_xref="GI:218249492"
/db_xref="GeneID:7106538"
/translation="MINRNEINENDKWDLSFLFANEEEYVKAINAIEIKTKEFKKYEK
LELNFDLFKETLNKYYEIMEDLEKVSYYAMLQLETDVTNKDSNKIYSICVNLATKVSN
TTSYFMPKILKTDEKKIQAWINDPELKDKKIAIEKILREKKHILSEQEEKILANYTPL
YSSYQSIFSALTNADMEFGEINKHPLTNSTYTLFLQNEDQKIRKEAFLRFYQKYKNNE
NTLANLIISDFKKNHFIAKTRKFQNTFSMQLFSNNIDKKVYTNLIETVNENLPVLNDY
YEFRKKVLNQEYLYHYDVYVPLTKGIIFKNSFEEACEKILKSLEVLGNEYTKILRNGL
LKERWVDKYENTGKRSGAFSAGSYNGKPYILLNYKDESIRDMFTLAHEAGHSMHSYFS
IKNNPFPHYNYSIFEAEIASIINEQILAEYLLKNETDTNKIKYIKLTQIDDMISTFFR
QTMFAEFEYIIHEMISKEEPVVKETLTETYMNLLKKYFGPSLKFDELSPLECLRIPHF
YSPFYVYQYATGIAAALSIYKGIKENKKDAVENYIKFLKTGGSKYPLDSLNITGVDLT
KKATIENTINIFKCRLEEIKKIFQ"
misc_feature 252533..254287
/gene="pepF"
/locus_tag="BbuZS7_0253"
/note="oligoendopeptidase F; Region: pepF; TIGR00181"
/db_xref="CDD:161749"
misc_feature 252677..254278
/gene="pepF"
/locus_tag="BbuZS7_0253"
/note="Peptidase family M3B Oligopeptidase F (PepF);
Region: M3B_PepF_3; cd09608"
/db_xref="CDD:189015"
misc_feature order(253664..253669,253676..253678,253748..253750,
254042..254044,254060..254062,254072..254074)
/gene="pepF"
/locus_tag="BbuZS7_0253"
/note="active site"
/db_xref="CDD:189015"
misc_feature order(253664..253666,253676..253678,253748..253750)
/gene="pepF"
/locus_tag="BbuZS7_0253"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:189015"
gene 254310..255014
/locus_tag="BbuZS7_0254"
/db_xref="GeneID:7106569"
CDS 254310..255014
/locus_tag="BbuZS7_0254"
/note="identified by match to protein family HMM PF01066"
/codon_start=1
/transl_table=11
/product="phosphatidyltransferase"
/protein_id="YP_002374772.1"
/db_xref="GI:218249719"
/db_xref="GeneID:7106569"
/translation="MKNINLILAWLVHIFTASGLIVGLYSIISIVNGNYSLLLKLTVI
GLIIDGIDGTMARKLKVKELIPEIDGTLLDNITDYINYTFIPVIFFYLGEFIEEKYKV
AICIGILLSSAYQFSRTDAKTNDNYFRGFPSLWNLFVILNIIFKMEQITNLITMSICI
ITSFIPIKFIYPSKTKELRKITIPITIISCLIFVVSIFSELSTTALKMAKTVLILYFA
YLTLASIYLTYKTRNR"
misc_feature 254310..255011
/locus_tag="BbuZS7_0254"
/note="Phosphatidylserine synthase [Lipid metabolism];
Region: PssA; COG1183"
/db_xref="CDD:31376"
misc_feature 254331..254597
/locus_tag="BbuZS7_0254"
/note="CDP-alcohol phosphatidyltransferase; Region:
CDP-OH_P_transf; pfam01066"
/db_xref="CDD:201581"
gene 255011..255625
/locus_tag="BbuZS7_0255"
/db_xref="GeneID:7106892"
CDS 255011..255625
/locus_tag="BbuZS7_0255"
/codon_start=1
/transl_table=11
/product="DedA protein"
/protein_id="YP_002374773.1"
/db_xref="GI:218249396"
/db_xref="GeneID:7106892"
/translation="MTKMYINTIIEYIDSNIAYSPIVFFSLLILAGLNVPISEDAIVL
MGGILSSRKNEYTILIFLGIFWGAYLGDIISFYIGKLMGNKLFKNKKDNNLLDKINYY
YGQYGVLTLFIGRFIPFGVRNAIFMSAGMGNMKSNLFIVSDFFATLLSIVVYFTLSFK
LGQSFEIIFSKIKIIIFAIFIAVIATTIIIYVIKKNKKVDKNLK"
misc_feature 255020..255508
/locus_tag="BbuZS7_0255"
/note="Uncharacterized membrane-associated protein
[Function unknown]; Region: DedA; COG0586"
/db_xref="CDD:30931"
gene 255645..255733
/locus_tag="BbuZS7_0256"
/db_xref="GeneID:7106387"
tRNA 255645..255733
/locus_tag="BbuZS7_0256"
/product="tRNA-Leu"
/db_xref="GeneID:7106387"
gene 255828..258350
/gene="leuS"
/locus_tag="BbuZS7_0257"
/db_xref="GeneID:7106292"
CDS 255828..258350
/gene="leuS"
/locus_tag="BbuZS7_0257"
/EC_number="6.1.1.4"
/note="leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA
synthetase; charges leucine by linking carboxyl group to
alpha-phosphate of ATP and then transfers
aminoacyl-adenylate to its tRNA; due to the large number
of codons that tRNA(Leu) recognizes, the leucyl-tRNA
synthetase does not recognize the anticodon loop of the
tRNA, but instead recognition is dependent on a conserved
discriminator base A37 and a long arm; an editing domain
hydrolyzes misformed products; in Methanothermobacter
thermautotrophicus this enzyme associates with prolyl-tRNA
synthetase"
/codon_start=1
/transl_table=11
/product="leucyl-tRNA synthetase"
/protein_id="YP_002374774.1"
/db_xref="GI:218249906"
/db_xref="GeneID:7106292"
/translation="MSKYEFIKIEKKWQEFWDNNKTYKVEEDPSIPKEKRLYILDMFP
YPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENYAIQTGTHPQK
STEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLAYVKEMPVW
YCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDDLEELEW
PESVKEMQRNWIGKSTGVEIEFEIEGHSDKIKVFTTRPDTIFGITYLVIAPENKLIEK
ITKNNFKQNVLKYVKHEELKSDLNRTSLEKDKSGVFTGSYAFHPITNEKIPIWVGSYV
LGTYGTGAVMGVPAHDERDFQFAKKYQLKILPVISKSGKNEILEKAFVDDGISINSPN
EFNNLKNSEVKDKVIKWLTKNKKGKEKVAYKLRDWIFSRQRYWGEPIPILFDKLGNAI
PLEENDLPLKLPEIANYKPSGTGESPLSRIKDWVNVKDMGFTRETNTMPQWAGSCWYY
LRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEHTVLHLLYSRFWHKVLYDLGYVNTKE
PFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNKFFDKKDNKEVTQVIAKMSKSLKN
VINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGIIGVFRFLNKIWNLREKELSKE
NPPREIISELHKVIKKVTEDTEKLNFNTAISAMMIFINELLKYEKNYLNIFKPFIIIL
SPYAPHLAEELWEYIGELPSLFKNSKWPKFDESLIIKDKKEIVLQINGKIKDKILLNK
ETGEKELKEIAMENSKIKSNLLNKKIVKIIVIKNKLVNIVIK"
misc_feature 255828..258260
/gene="leuS"
/locus_tag="BbuZS7_0257"
/note="leucyl-tRNA synthetase; Validated; Region: leuS;
PRK00390"
/db_xref="CDD:178996"
misc_feature 255933..>256520
/gene="leuS"
/locus_tag="BbuZS7_0257"
/note="catalytic core domain of leucyl-tRNA synthetases;
Region: LeuRS_core; cd00812"
/db_xref="CDD:173906"
misc_feature 255981..255992
/gene="leuS"
/locus_tag="BbuZS7_0257"
/note="HIGH motif; other site"
/db_xref="CDD:173906"
misc_feature 256527..257060
/gene="leuS"
/locus_tag="BbuZS7_0257"
/note="Leucyl-tRNA synthetase, Domain 2; Region:
tRNA-synt_1_2; pfam13603"
/db_xref="CDD:205781"
misc_feature <257007..257795
/gene="leuS"
/locus_tag="BbuZS7_0257"
/note="nucleotidyl transferase superfamily; Region:
nt_trans; cl00015"
/db_xref="CDD:212170"
misc_feature 257682..257693
/gene="leuS"
/locus_tag="BbuZS7_0257"
/note="active site"
/db_xref="CDD:173912"
misc_feature 257682..257693
/gene="leuS"
/locus_tag="BbuZS7_0257"
/note="KMSKS motif; other site"
/db_xref="CDD:173912"
misc_feature 257793..258086
/gene="leuS"
/locus_tag="BbuZS7_0257"
/note="Anticodon-binding domain of bacterial and
eukaryotic mitochondrial leucyl tRNA synthetases; Region:
Anticodon_Ia_Leu_BEm; cd07958"
/db_xref="CDD:153412"
misc_feature order(257802..257804,257811..257816,257823..257825,
257835..257837,257952..257954,257964..257966,
257973..257978,257985..257987,257994..257996,
258006..258008)
/gene="leuS"
/locus_tag="BbuZS7_0257"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153412"
gene 258365..260668
/locus_tag="BbuZS7_0258"
/db_xref="GeneID:7106366"
CDS 258365..260668
/locus_tag="BbuZS7_0258"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374775.1"
/db_xref="GI:218249245"
/db_xref="GeneID:7106366"
/translation="MDFEGLSIRYKGIIFTIFILITIFLGFFLKNLKFDANILKLIPK
TKETESLIDIDKSNSLLSTIVIFQDKKNIFNKKNFETINSVISEITKILKVSPNAVTS
IFSYFPQFKKEIYTDKDIEEIKSKIKSTPFVKNTFLGNSENLIYFIIIPSESDQINFS
RNLKTELDEMEKTIKKYETDDLKLYLTGDLIVREKILNYMVEDFKILGPLATFVVIIS
LYLIIKNLIGALIPIFIALLSLIWTFGIKGFVQSPITVPETSMIVLLISIGCANAVHI
INEIFKLIKKEQLSKESIKATIKKLKTPILLTSFTTAFGFLSLTTSSINAYKTMGIFM
SIGVIISMIISLTVLPGIITLIPFAKKKSFEKEKENKLNKISFLERLAKLNTQITKSI
LKRKYTSSIMVLIILGISFVGLLKIEINFDEKDYFKESTSVKKTLNLMQKEMGGISIF
KIEIEGRPGEFKNAKAMQILDLITDKLDAFSAKTQSSSINGILKFTNFKIKKESPLEY
KLPENKIILNKLINLIDKSDWTKDNKRMYINDDWSLISIIVRIEDNSTEGIKKFEKYA
INTINEYMKNNKYHFSGVYDKVLIAKTMVKEQVINIITTLGSITLLLMFFFKSIKTGI
IIAIPVAWSVFLNFAVMRLFGITLNPATATIASVSMGVGVDYSIHFFNTFILQYQKNQ
IYKTALLESIPNVFNGIFANSISVGIGFLTLTFSSYKIISTLGAIIAFTMLTTSLASL
TLLPLLIYLFKPRVKLASNNNFKKLKQ"
misc_feature 258365..260554
/locus_tag="BbuZS7_0258"
/note="Predicted exporters of the RND superfamily [General
function prediction only]; Region: COG1033"
/db_xref="CDD:31236"
gene complement(260657..263077)
/gene="lon"
/locus_tag="BbuZS7_0259"
/db_xref="GeneID:7106454"
CDS complement(260657..263077)
/gene="lon"
/locus_tag="BbuZS7_0259"
/EC_number="3.4.21.53"
/note="identified by match to protein family HMM PF00004;
match to protein family HMM PF02190; match to protein
family HMM PF05362; match to protein family HMM PF07728;
match to protein family HMM TIGR00763"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease La"
/protein_id="YP_002374776.1"
/db_xref="GI:218249286"
/db_xref="GeneID:7106454"
/translation="MDESKKARSGDKKKEKAVAGILPHSNKPARVPLIAVPSHPVFPG
MFIPIVLISDSDMKAIDYAMKGNGIIALFVLNDKFLEKNNNNAQQKLIIDYSKDIYSV
GVTGKIIKKINLPDGGYNIFVSTFDRIKFIKVVLNDKFPIIEIDYLKQIPVRKDDIQS
KAVYGSILLRTKEIFAHRKMPEVQLNMVNIEDKGKLCDIVASTISSSKNDHQIVLETL
NVKDRLKKVLELIYEELNLIEIQNKIAKGIQERLEKQQKEFFLKEQLKAIKAELGIGD
KKSSDLEKLKTKLKALELKGEPLEVVEKELEKFSLLETSSAEYIVVRNYLELITELPW
RDLKINFDKLDLQKSKKILDKTHYGMNEVKDRIIEYISVLKLRKTQKGAIILLVGPPG
VGKTSIGAAIAKVLRTKFFRFSVGGMRDESEIKGHRRTYVGALPGKIIQGLRITKTNS
PVFLIDEVDKISASSYGDPFSVLLEVLDPEQNVRFRDHYLDLPFDISNVFFILTANSV
ETIPRPLLNRMEIIEISGYIDNEKIEIARKYLIPKVLSENGVDKDSLKFQSSSLVQIA
QEYARDNGVRNFEKYLNKIVRKVARKLIENTEVKSYQISNDNLEEYVGVPVFRKESMP
NAMYSGMVMGLAWTNYGGSTLMIETVKTESKVGGIKLTGRLGDVMKESANIAYTYVNS
IKGDLSISKSFFEKNIIHLHIPEGATPKDGPSAGITIASAFISLALNKVVRPHLAMTG
ELSLTGNVMMIGGLKEKIIAAKRSGVEHIIVPKANRVDLEEIPTNIKSGINFYLVDNM
REVIKLLF"
misc_feature complement(<262847..262990)
/gene="lon"
/locus_tag="BbuZS7_0259"
/note="Found in ATP-dependent protease La (LON); Region:
LON; smart00464"
/db_xref="CDD:197740"
misc_feature complement(260660..262984)
/gene="lon"
/locus_tag="BbuZS7_0259"
/note="ATP-dependent protease La; Region: lon; TIGR00763"
/db_xref="CDD:162028"
misc_feature complement(261512..261988)
/gene="lon"
/locus_tag="BbuZS7_0259"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(261890..261913)
/gene="lon"
/locus_tag="BbuZS7_0259"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(261560..261562,261710..261712,
261887..261910))
/gene="lon"
/locus_tag="BbuZS7_0259"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(261707..261724)
/gene="lon"
/locus_tag="BbuZS7_0259"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(261524..261526)
/gene="lon"
/locus_tag="BbuZS7_0259"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature complement(260660..261271)
/gene="lon"
/locus_tag="BbuZS7_0259"
/note="Subunit ChlI of Mg-chelatase; Region: ChlI;
cl12214"
/db_xref="CDD:209472"
gene 263353..265479
/gene="recJ"
/locus_tag="BbuZS7_0260"
/db_xref="GeneID:7106496"
CDS 263353..265479
/gene="recJ"
/locus_tag="BbuZS7_0260"
/EC_number="3.1.-.-"
/note="identified by match to protein family HMM PF01368;
match to protein family HMM PF02272; match to protein
family HMM TIGR00644"
/codon_start=1
/transl_table=11
/product="single-stranded-DNA-specific exonuclease RecJ"
/protein_id="YP_002374777.1"
/db_xref="GI:218249182"
/db_xref="GeneID:7106496"
/translation="MKIWKQKETNIQAQELTRIAKQYNINTFEATLLINREIKEEDFM
FFLEDSVNLLHNPFLLKNIDKFIKRINKAIKNNENILIFGDKDADGITATIIMYETLK
DFGLNVSYKIPSNGEFYGLSNELINTALEKKISLIITVDNGISSIEEINYANSKGIEI
IITDHHLPGENFKTENIVINPHLKDDKYPFKEIAGCCVSFKACLALSMSFTDLYSKNL
VFLFLEKTKNEIILHAIEINNYILKQYLRLNNKNDPLINSNKLEKFVQNKCIIIFNKE
DQNKLLNKHFAKSININTIDISENFIKKYPNFIKKTLTDLIQATKYFKYKEVEIKDKL
YYIFYNVIFETNKNLLQKCLKRLSFVAIGTIADNMPIINENRIILKVGLKEIALRERM
SINYLLKDANILTKPNITSTDIAYKIAPILNSTGRLEKADIAINFLLTNDINQIENKF
KEIKEINELRKYKEEKAWNSHNKNTIFKNDKFIVCYDNNTPKGISSRIATRLSSYYQK
VAIFLTKQDNIIKGSIRSNNKINSKTLISIIPSHLVINSGGHKAAAGFTLHENLLEDF
IKELEYATTKVEYETTNENESIPIDAILPKNLTKDSLFKTIEIFEPYGYEFREPILLM
KNAYLQELKIIDKNHSSKHINMRIKSQNDYYKAIFFNGTKKIEELDIKEDQYLDIIFT
VNEDFYYPREKILKIIDIKKNAQINV"
misc_feature 263569..263970
/gene="recJ"
/locus_tag="BbuZS7_0260"
/note="DHH family; Region: DHH; pfam01368"
/db_xref="CDD:201752"
misc_feature <264355..265449
/gene="recJ"
/locus_tag="BbuZS7_0260"
/note="single-stranded-DNA-specific exonuclease RecJ;
Region: recJ; TIGR00644"
/db_xref="CDD:161976"
misc_feature 264874..265065
/gene="recJ"
/locus_tag="BbuZS7_0260"
/note="DHHA1 domain; Region: DHHA1; pfam02272"
/db_xref="CDD:202185"
gene 265472..266416
/locus_tag="BbuZS7_0261"
/db_xref="GeneID:7106720"
CDS 265472..266416
/locus_tag="BbuZS7_0261"
/note="identified by match to protein family HMM PF01551"
/codon_start=1
/transl_table=11
/product="peptidase M23"
/protein_id="YP_002374778.1"
/db_xref="GI:218249707"
/db_xref="GeneID:7106720"
/translation="MYRIQKALLILCILGIENINSEIINTIPKVQYKKEAFQGDYIYF
ASNQNFKSLSLLSTNKNPIISSSPFKFTVGSKIYYIALMGITPMIKEGKRKIQIEFEN
KSYIKEIEIKKFHFKKTKISFNKEKAKLITQKKSTKQKEQALVLWNIIGNTGDTTIYH
YDALVKPIKDQYIVTSLYGDLRLYMQGDKKISNYTMHNGIDYAPFKRENTPIFAAGKG
KVVFAQNRELTGNTLIIQHLPGVFTIYLHLSKLGISENKIVSAGEYIGHTGNTGLSTG
PHLHFEVRINGIAINPDFLLNGMLIDKNKIINNIKRIE"
misc_feature <265844..266347
/locus_tag="BbuZS7_0261"
/note="Membrane proteins related to metalloendopeptidases
[Cell envelope biogenesis, outer membrane]; Region: NlpD;
COG0739"
/db_xref="CDD:31082"
misc_feature 266054..266347
/locus_tag="BbuZS7_0261"
/note="Peptidase family M23; Region: Peptidase_M23;
pfam01551"
/db_xref="CDD:201854"
gene 266431..266640
/gene="rpsU"
/locus_tag="BbuZS7_0262"
/db_xref="GeneID:7106880"
CDS 266431..266640
/gene="rpsU"
/locus_tag="BbuZS7_0262"
/note="a small basic protein that is one of the last in
the subunit assembly; omission does not prevent assembly
but the subunit is inactive; binds central domain of 16S
rRNA"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S21"
/protein_id="YP_002374779.1"
/db_xref="GI:218249567"
/db_xref="GeneID:7106880"
/translation="MVTVTVDKNENLEKALKRFKRMIEKEAIIREWKRREYYEKPSTI
RVKKEKAFKRKQAKKVRKLKQKTNR"
misc_feature 266431..>266565
/gene="rpsU"
/locus_tag="BbuZS7_0262"
/note="30S ribosomal protein S21; Reviewed; Region: rpsU;
PRK00270"
/db_xref="CDD:178952"
gene complement(266678..269041)
/locus_tag="BbuZS7_0263"
/db_xref="GeneID:7106817"
CDS complement(266678..269041)
/locus_tag="BbuZS7_0263"
/note="identified by match to protein family HMM PF01580;
match to protein family HMM PF09397"
/codon_start=1
/transl_table=11
/product="DNA translocase FtsK"
/protein_id="YP_002374780.1"
/db_xref="GI:218249620"
/db_xref="GeneID:7106817"
/translation="MKDFYQYFQFLFFFMLSVISFSLFVALTPLSNVFVFFVFNLLGQ
ILLNVFSFLSFYLIVYPIVNWYAYKKHIFTKRFIFNWNYTVILFFTLIFLIKINSNIE
KSYFIKIFLINFGIVLGNFFIFTLLILEFVVWIYLNYVFFKDVNFILDTFKFLEFKIK
ILFENILSYFPFSNSLDVKKDIKVYGDSVDDLKDSQVFDEKKNIINDEEYQALWSFSA
FLRNNKKPSNINLDKTIFEGSDLKEAGSLNKDILNENALNSDKNVDEIDESCEYKYLD
NLEDNKLVISGKVKACEIRTKGIISQVAISHTYNENVALNKKSDSYVIDISVFDQKEI
KNDVEDIEYDKEIQKQSMILQETLKEFNINAKLIDIIKGPVVTMYAVRPDKGIKLSKI
TSISDNIALRLAAIRVRIIAPIPGREAVGIEIPNKRREFILISEIIDSKEFRGDFRIP
FALGKEISGENIVFDLVNSPHLLIAGATGAGKSVCVNSLIASIIFSKSPDEVKLIMID
PKIVELKLFNDIPHLLTPVITDVKRALEALRWCLDEMERRYVLLDNLLVRDISSYNKK
IKDENLNLMILPYLVIIIDEFADLILSARKDLENLISRLAAMARAVGIHLVLATQRPS
VDVITGVIKANFPSRISFMVASSMDSRIILGSSGAEKLLGKGDMLYISSLNPFPQRIQ
GGFLKEREVYRLVEEVKKFGSPNYIDDEIFIDSVKEPDLVALGPSDEPMFDEALEIVK
TTRKASASYLQRRLKIGYNRAARIIEIMEDMGYVGPVNGSKPREVLI"
misc_feature complement(266681..>268435)
/locus_tag="BbuZS7_0263"
/note="DNA segregation ATPase FtsK/SpoIIIE and related
proteins [Cell division and chromosome partitioning];
Region: FtsK; COG1674"
/db_xref="CDD:31860"
misc_feature complement(267167..267736)
/locus_tag="BbuZS7_0263"
/note="FtsK/SpoIIIE family; Region: FtsK_SpoIIIE;
pfam01580"
/db_xref="CDD:190044"
misc_feature complement(266681..266863)
/locus_tag="BbuZS7_0263"
/note="This domain directs oriented DNA translocation and
forms a winged helix structure; Region: Ftsk_gamma;
smart00843"
/db_xref="CDD:197911"
gene complement(269038..269838)
/locus_tag="BbuZS7_0264"
/db_xref="GeneID:7106079"
CDS complement(269038..269838)
/locus_tag="BbuZS7_0264"
/EC_number="2.7.1.66"
/note="BacA; phosphatase activity in Escherichia coli not
kinase; involved in bacitracin resistance as bacitracin
supposedly sequesters UDP disphosphate which reduces the
pool of lipid carrier available to the cell"
/codon_start=1
/transl_table=11
/product="UDP pyrophosphate phosphatase"
/protein_id="YP_002374781.1"
/db_xref="GI:218249679"
/db_xref="GeneID:7106079"
/translation="MTNILSAIILGIIQGITEFLPISSSGHLLLFRHFINLKLSIIFD
IYLHLATVLVIIIYYRKRILELFLTFIRFSLRKTVKSDLTNLKLILLILIITIVTGVV
GTFISKYESMFTLSFVLINFIITGILILMLEFNFLKVDFKGNILLAGIFMGLMQGLGA
LPGISRSGITIFSASVIGFNRKSAFEISFLSLIPIVFGAILLKHKEFYDIFMVLNFFE
INLGALVAFVVGIFSINFFFKMLNNKKLYYFSIYLFALSIIVCYFVRI"
misc_feature complement(269068..269820)
/locus_tag="BbuZS7_0264"
/note="undecaprenyl-diphosphatase UppP; Region:
undec_PP_bacA; TIGR00753"
/db_xref="CDD:129836"
gene complement(269853..272006)
/locus_tag="BbuZS7_0265"
/db_xref="GeneID:7106139"
CDS complement(269853..272006)
/locus_tag="BbuZS7_0265"
/note="identified by match to protein family HMM PF01464"
/codon_start=1
/transl_table=11
/product="transglycosylase"
/protein_id="YP_002374782.1"
/db_xref="GI:218249839"
/db_xref="GeneID:7106139"
/translation="MFNRSSCVLQNFLFLFLFLSLVSCFAKKEISGNNFIKAHSKEFD
LNNLNWLWNFDYTKKNFDKHFNIDPSSYIYVAYLFKKIGFEEKFVEYMKKAIANGDSI
ASQFAGIKLIEYFNSAKEYFASELIGEKLYKKYENNKFIILGYFKSLYWQKKNDKALS
LLNKLDKMKFSDYQENENILLKAVLYLNLSNVSESKIYFNELFENLPANYLHVRAYDY
FIIENKSRYFGANFLNLVRFKYEVANGNFNGAINILNKNGLNDYYDNNIVLSDVYKAF
ISSGKVSNALTFFSKIKSKYKNYYLGILNLREKNNLGLLLLKEYLEGLNLNNEINRLD
LLNTAFSNLIFTKSARDYFAESLPKFYTEGDKKNSTFIKILEEYILESIQLEDYGNLY
KLYSNAQKVISNSVLSKLAFINARLIYHKLIKPNVSGEYKSLLHSAVNYDKWSYSSFM
SRYLLDQNIDEFFTGGSDIKYEQSDYEIFLEGFLKFNLFNYVRGFISEDFRNGYKFSL
DFYRKVYDELLKSENYYDATLVINYLVNQDESALMENDYKRLYPYLYGSLIEYWAKRR
GLEASVVFSLIKAESSFEKNAVSKPGAVGLMQVMPSTANDISKELKYFNYDLKIPKDN
IIIGTYYLKKRISTTGSLYKALASYNGGIGNVRKWEKSYGHLSKELFIEAIPFSQTRN
YIKKILVYSVFYDALYEKKGIDSVIVKIMGEFPKN"
misc_feature complement(269904..>270356)
/locus_tag="BbuZS7_0265"
/note="Soluble lytic murein transglycosylase and related
regulatory proteins (some contain LysM/invasin domains)
[Cell envelope biogenesis, outer membrane]; Region: MltE;
COG0741"
/db_xref="CDD:31084"
misc_feature complement(269937..270296)
/locus_tag="BbuZS7_0265"
/note="Lytic Transglycosylase (LT) and Goose Egg White
Lysozyme (GEWL) domain. Members include the soluble and
insoluble membrane-bound LTs in bacteria, the LTs in
bacteriophage lambda, as well as, the eukaryotic
'goose-type' lysozymes (GEWL). LTs catalyze...; Region:
LT_GEWL; cd00254"
/db_xref="CDD:29556"
misc_feature complement(order(270060..270062,270114..270116,
270207..270209,270267..270269))
/locus_tag="BbuZS7_0265"
/note="N-acetyl-D-glucosamine binding site [chemical
binding]; other site"
/db_xref="CDD:29556"
misc_feature complement(270267..270269)
/locus_tag="BbuZS7_0265"
/note="catalytic residue [active]"
/db_xref="CDD:29556"
gene complement(271999..273015)
/locus_tag="BbuZS7_0266"
/db_xref="GeneID:7106219"
CDS complement(271999..273015)
/locus_tag="BbuZS7_0266"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374783.1"
/db_xref="GI:218249307"
/db_xref="GeneID:7106219"
/translation="MKGFLAIKLSNNEYYPVLNLDDSSVKRIILGKVAGDTSIKLNLY
VSEYEDFLDPFLVGSFFLDNLKKESLSVNVYFKVVDEILYVYGESDGIQDKSKFDLSL
VDFNQNLKGSNRGNPLNDFKSDIGSDLSVEKLGSEFDLNFEEKDDFVKKDVSDVSMPT
INSLDLKTEEDQKIETNVSDFEDFDDNYDDSLVDSKKLNLENKKVEYIDEKSLNLNNF
EFQKLEESSLEEEEDLHDLSVEDIIADIDKELIDTSDEDVELDLREDFENDMVKNNFK
LNSSEGMVHSPMLYLSLISLFLLIFFSLFLVFSKILKPRDFVSYYFEYDKNRIKRYEK
DQYV"
gene 273222..274604
/locus_tag="BbuZS7_0267"
/db_xref="GeneID:7106517"
CDS 273222..274604
/locus_tag="BbuZS7_0267"
/note="identified by match to protein family HMM PF00515;
match to protein family HMM PF07719"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374784.1"
/db_xref="GI:218249477"
/db_xref="GeneID:7106517"
/translation="MLSLFIVISSLTVFILVFLFFKIALKLTIGKNIGKIKKDDERTR
KLIERAISLLKTNPNEIGALEILNNYYYKNKDHENGIKYAKKLCQLIEDNPINQEINT
FKAFLSYGFYNLKRNFNREALEYLRKAFLIKKTDEDANYYLGVAFLKNEMYKEALYYL
KKVHNFNKNNKDVLKHLGITLFNLESYRQAVIIFNNIKKNIQGDIEALLAYAKSLSKM
NQDHLALEIANKIKQKDGMIYEALLITSEIHSKNKELEKLEQNIKEIIKVKPDLPKKT
FLELFYNLGELQISVENYQKATEAFTKVEEIDPNYKNIKEKLEFSKRLNENIALRIYL
RSSKENFEKIANEIILKLYLNKFQIRDSKINEVTTQFIDINFHLANNQWEENLIVRFV
RTEQDTFGELFLKDFISKIKENKIKGLCIAPSKFSLKAKQMIEGRLIDLVEGKKLAQI
LKKINISKYT"
misc_feature 273531..273818
/locus_tag="BbuZS7_0267"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(273531..273536,273540..273545,273552..273557,
273642..273647,273651..273656,273663..273668,
273744..273749,273756..273761,273768..273773)
/locus_tag="BbuZS7_0267"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 273531..273725
/locus_tag="BbuZS7_0267"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature order(273549..273551,273585..273587,273597..273599,
273606..273608,273651..273653,273687..273689,
273699..273701,273708..273710,273753..273755,
273789..273791,273801..273803,273810..273812)
/locus_tag="BbuZS7_0267"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene complement(274611..275864)
/locus_tag="BbuZS7_0268"
/db_xref="GeneID:7106554"
CDS complement(274611..275864)
/locus_tag="BbuZS7_0268"
/note="identified by match to protein family HMM PF01476;
match to protein family HMM PF01551"
/codon_start=1
/transl_table=11
/product="peptidase M23"
/protein_id="YP_002374785.1"
/db_xref="GI:218249217"
/db_xref="GeneID:7106554"
/translation="MIIPKKKQRVEKRKKNFLFNSKKSVNFELKDFANISNIGKRRKK
VFKIKNFFKKKINFFKKVSLFFYKLKIQNINHYEYKYYYKSLRDKVFDIFSVRFDYKL
VFKLNAIIFIFILTFYINIFSYYGSYVFLNRLSLPKDYFIDTFLYYSDQDIAQISSYL
PESNVSANVPGFKKNFVLKVFDHKIKPGETLSHVAARYQITSETLISFNEIKDVRNIK
PNSVIKVPNMKGIVYIVKKNDSISSIASAYNVPKVDILDSNNLDNEVLFLGQKLFIPG
GRLPKDFLKEVLGETFIYPVQGVITSGYGYRPDPFTGVISFHNGIDIANLANTPIKAS
REGVVVTAGFNAGGYGKYIVISHSNGFQTLYAHLNSFAVKVGKKVSRGAVIGYMGSTG
YSTGNHLHFTIFKNGKTENPMKYLR"
misc_feature complement(274614..275321)
/locus_tag="BbuZS7_0268"
/note="Membrane proteins related to metalloendopeptidases
[Cell envelope biogenesis, outer membrane]; Region: NlpD;
COG0739"
/db_xref="CDD:31082"
misc_feature complement(275190..275318)
/locus_tag="BbuZS7_0268"
/note="Lysine Motif is a small domain involved in binding
peptidoglycan; Region: LysM; cd00118"
/db_xref="CDD:212030"
misc_feature complement(275043..275174)
/locus_tag="BbuZS7_0268"
/note="Lysine Motif is a small domain involved in binding
peptidoglycan; Region: LysM; cd00118"
/db_xref="CDD:212030"
misc_feature complement(274629..274919)
/locus_tag="BbuZS7_0268"
/note="Peptidase family M23; Region: Peptidase_M23;
pfam01551"
/db_xref="CDD:201854"
gene 275926..276432
/gene="lepB"
/locus_tag="BbuZS7_0269"
/db_xref="GeneID:7106757"
CDS 275926..276432
/gene="lepB"
/locus_tag="BbuZS7_0269"
/EC_number="3.4.21.89"
/note="identified by match to protein family HMM
TIGR02227"
/codon_start=1
/transl_table=11
/product="signal peptidase I"
/protein_id="YP_002374786.1"
/db_xref="GI:218249779"
/db_xref="GeneID:7106757"
/translation="MRIFKAHKYELASILAACLFLITLIKLFLSFYIVKGESMTPAIF
EKNWIVNHKFAYGLRIKKHQKYLLLWKTPQKNEMVLIKDPITNKIAIKKIFAIPGEKF
KQIEKNTICIHDLNFKIDENILKKNTKKIPEDHYLVIGENKQISLDSRDYGFIKIDNI
LGKIIYYF"
misc_feature 275956..276429
/gene="lepB"
/locus_tag="BbuZS7_0269"
/note="signal peptidase I, bacterial type; Region:
sigpep_I_bact; TIGR02227"
/db_xref="CDD:211726"
misc_feature 276013..276417
/gene="lepB"
/locus_tag="BbuZS7_0269"
/note="The S26 Type I signal peptidase (SPase; LepB;
leader peptidase B; leader peptidase I; EC 3.4.21.89)
family members are essential membrane-bound serine
proteases that function to cleave the amino-terminal
signal peptide extension from proteins that are...;
Region: S26_SPase_I; cd06530"
/db_xref="CDD:119398"
misc_feature order(276037..276039,276199..276201)
/gene="lepB"
/locus_tag="BbuZS7_0269"
/note="Catalytic site [active]"
/db_xref="CDD:119398"
gene complement(276458..277927)
/locus_tag="BbuZS7_0270"
/db_xref="GeneID:7106156"
CDS complement(276458..277927)
/locus_tag="BbuZS7_0270"
/note="identified by match to protein family HMM PF00012"
/codon_start=1
/transl_table=11
/product="heat shock protein 70"
/protein_id="YP_002374787.1"
/db_xref="GI:218249702"
/db_xref="GeneID:7106156"
/translation="MKKWIGIDLGTTNTVASYFDVSSKIILNERGERITPSIVSFSDK
DVLVGSAAKNQILVNPQKTFYNFKTNIGSNNFYKVDGEFYKAEYISAHLLASVKRNAE
KFLDEEIENAVITVPAYFSEIQRRCVVEAANFAGLNCKAILNEPTAAAIAYAFERQID
GIFLIYDLGGGTFDVTLMEKQGDTYTVLSVKGQSRLGGNDFNKIIEKYVLDSFKNKYP
DFNLEDIFLLEQLRERIEEGKKNLSVMEEVDITLLFLDGKHLNYNLKRDEFNSMISEY
IDKTIQLSMECIADSGVDISSVSKIILSGGSTRIPLIEKVLKESFPSATILDALNQDE
VVAIGAGIHAFSLSRNDSVIKFKDVTPYSLGLEIKDNEFFTLIKRNTALPISRSKLFT
TTNDYQDEIEIHILQGEYKKASLNYSIGRFSFGNIQKALKGIPKIEVLFTLNESGILS
VNAKDLETNSSNFIEIKITSSSDNVAKESLSNTFTSIID"
misc_feature complement(276857..277915)
/locus_tag="BbuZS7_0270"
/note="Actin-like ATPase involved in cell morphogenesis
[Cell division and chromosome partitioning]; Region: MreB;
COG1077"
/db_xref="CDD:31275"
misc_feature complement(276893..277915)
/locus_tag="BbuZS7_0270"
/note="Nucleotide-binding domain of the HSP70 family;
Region: HSP70_NBD; cd10170"
/db_xref="CDD:212667"
misc_feature complement(order(276929..276931,276998..277003,
277007..277015,277208..277213,277220..277222,
277331..277336,277406..277408,277412..277429,
277493..277495,277577..277579,277724..277726,
277889..277900,277904..277906))
/locus_tag="BbuZS7_0270"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212667"
misc_feature complement(order(277166..277171,277175..277177,
277217..277219,277229..277231,277238..277243,
277250..277252,277616..277621,277766..277771,
277778..277780,277790..277792,277838..277840))
/locus_tag="BbuZS7_0270"
/note="putative NEF/HSP70 interaction site [polypeptide
binding]; other site"
/db_xref="CDD:212667"
misc_feature complement(order(277364..277375,277496..277498,
277502..277507,277550..277555,277559..277564))
/locus_tag="BbuZS7_0270"
/note="SBD interface [polypeptide binding]; other site"
/db_xref="CDD:212667"
gene complement(277905..278426)
/locus_tag="BbuZS7_0271"
/db_xref="GeneID:7106875"
CDS complement(277905..278426)
/locus_tag="BbuZS7_0271"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374788.1"
/db_xref="GI:218249749"
/db_xref="GeneID:7106875"
/translation="MFIVFYLILIIFIFIYFHVYINLKIKSNSILRKFKSEVDKTIIE
INQATDRNINIIEIKIESLNRIIKEVDERIEILDQRLLGFNNSSIPGNSPSSFGSKSD
GIYKSNLDYSMPTIEKNIIKESYNVRNQIILLHEQGMSFEAIAKKFKLDLGEVELIIS
IHRGGVHEKMDRY"
gene complement(278446..278748)
/locus_tag="BbuZS7_0272"
/db_xref="GeneID:7106922"
CDS complement(278446..278748)
/locus_tag="BbuZS7_0272"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374789.1"
/db_xref="GI:218249641"
/db_xref="GeneID:7106922"
/translation="MDTFEVFKMSVVGSFKARQFLSESEKHKRLKINQNARFRFLRDC
HTDSEVGNVCVVNKVGDNYLLSFLVKKNKNEEKVMLSLYPDKFEDPKIGKNVNIKR"
gene complement(278775..280679)
/locus_tag="BbuZS7_0273"
/db_xref="GeneID:7106101"
CDS complement(278775..280679)
/locus_tag="BbuZS7_0273"
/note="identified by match to protein family HMM PF03961"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374790.1"
/db_xref="GI:218249573"
/db_xref="GeneID:7106101"
/translation="MDDRAINFSELCDKMRSYLERESHVDLMEIEADTLEEALNDASL
ELSVPYKELDYEILLKGSNGILGYGKKKWKIVAYRNSSSKPKVSLDSKNDSGEKEVIS
SDGEFFIRKSSKGVFLKVISPKGQGIPIKYQDVIFKLELHSNIENFNKDIVKGIVENA
SGYYEKIADFESDPSENVTMMVQISENSMSVTIEFTAPGINGAEIFAQDIFNILRKYG
VIDIAILKDKVAKFVDYPVYGEPVELARGLEPVKGKDSYIDFIVDENNRFGEYEVSSI
GFRNVIEGEELARIIPFGKGVDGYTVFGKVLKSESGQDIDFILGENTFRDGYKIRAKC
NGYMSVSDGVISVHNIYLVKGDVGPATGDIVNNGMVLVQGNVLDGYNIMAKSGIEVKG
LVGRCNLKTDGSIIFHSGVNGKGDSKIYARGNVRAKFLENVTLNCGGEVEVLRGIVNS
SVSSKKRVLCIGKKSKIVGSNVCAKEEVRAYSIGSDRSCETCIDVGYDPEIKDLLTRF
TSHLEKIEKRLEVLTKDIVALKKNIVLITDKAEKSLKIDSYNEFVNESKILRMEIKMI
EAKRINLQNELENTKIEGKVSVENIACSGVKLYIKNAFYELSKDYNNVTFIEDDNYIK
VMTYIPFKSR"
misc_feature complement(278778..280367)
/locus_tag="BbuZS7_0273"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1315"
/db_xref="CDD:31506"
gene complement(280682..281161)
/locus_tag="BbuZS7_0274"
/db_xref="GeneID:7106823"
CDS complement(280682..281161)
/locus_tag="BbuZS7_0274"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374791.1"
/db_xref="GI:218249371"
/db_xref="GeneID:7106823"
/translation="MFISRELKYILLTSVSALFISAVLGLFCGLSFFTILVRSLLQFV
FFFVIGLLIEYIFKKYLSNLFSTELSGNMENKPQDDKKSDKDFKENLDFQNKNSLYEN
SQNISSSGDFIEEVKKYKFETEDVSRGSDKNKKMSFIEDNDPKVVADAIKTLMSKKE"
misc_feature complement(<280778..281119)
/locus_tag="BbuZS7_0274"
/note="Integral peroxisomal membrane peroxin; Region:
Pex24p; pfam06398"
/db_xref="CDD:203435"
gene complement(281168..282055)
/locus_tag="BbuZS7_0275"
/db_xref="GeneID:7106668"
CDS complement(281168..282055)
/locus_tag="BbuZS7_0275"
/note="identified by match to protein family HMM PF01656"
/codon_start=1
/transl_table=11
/product="ATP-binding protein"
/protein_id="YP_002374792.1"
/db_xref="GI:218249263"
/db_xref="GeneID:7106668"
/translation="MEDQAQSLRDMMRLNGKFNFSVDEKVQNSKTRFIAVSSGKGGVG
KSNIAIGLALKYSELGKKVLILDADIGMANVNILLGVIPKYSIYHMIAQSRDIREVIT
KTEYNIDLLAGASGTMELLDLSDVDVNKFIKELLKIYEYDIVVIDTSAGISRQVISFL
LSSDDVVIVTTPEPTSITDAYGIIKVLSYKMENLKNLRLIVNRVANVSEAKGVAKKVI
DISGQFLNLNIDYLGHIYEDQNIRSSVFKQKPFVLVNPNSKASYCLDSIVATLEEVSL
DNRKRRGVIGFILRFFGVE"
misc_feature complement(281171..281968)
/locus_tag="BbuZS7_0275"
/note="Antiactivator of flagellar biosynthesis FleN, an
ATPase [Cell motility]; Region: flhG; COG0455"
/db_xref="CDD:30803"
misc_feature complement(<281489..281902)
/locus_tag="BbuZS7_0275"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(281348..>281638)
/locus_tag="BbuZS7_0275"
/note="FleN is a member of the Fer4_NifH superfamily. It
shares the common function as an ATPase, with the
ATP-binding domain at the N-terminus. In Pseudomonas
aeruginosa, FleN gene is involved in regulating the number
of flagella and chemotactic motility by...; Region:
FleN-like; cd02038"
/db_xref="CDD:73301"
gene complement(282067..283233)
/locus_tag="BbuZS7_0276"
/db_xref="GeneID:7106472"
CDS complement(282067..283233)
/locus_tag="BbuZS7_0276"
/note="Positive regulator of class III flagellar genes"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis regulator FlhF"
/protein_id="YP_002374793.1"
/db_xref="GI:218249313"
/db_xref="GeneID:7106472"
/translation="MVQYFTEKGPTYNEVIEIIKKKYGKNARVMTYKTVPHGGILGLF
SKDWVEVSGYVRYDIGNQQINVEDEKRKILQSIKREENSSIEDVLKEVKSLKTELAHK
KENINHPTITKIEDILRENDFSENYIKDINEFIKREFSLSDLDDYERVREDVVLYIAK
TIKCSGSIIDNLKKRVFILVGPTGVGKTTTIAKLAAIYGINGESKSLNIKIITIDNYR
IGAKKQIQTYGDIMGIPVRAIESFKDLKDEITDSKDFDLILVDTIGKSPKDFMKLAEM
KELLNACGRDAEFHLAVSSTTKTSDVKEIFHQFSPFNYKTVIFTKVDETTCVGNLISL
IYEMKKVVSYVTDGQIVPHNISVAEPLTFIRRINGYRISDDAEFIKKIKSKSYY"
misc_feature complement(282070..283233)
/locus_tag="BbuZS7_0276"
/note="flagellar biosynthesis regulator FlhF; Provisional;
Region: PRK12723"
/db_xref="CDD:183702"
misc_feature complement(<282649..282804)
/locus_tag="BbuZS7_0276"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(order(282667..282687,282757..282762))
/locus_tag="BbuZS7_0276"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206746"
misc_feature complement(282754..282762)
/locus_tag="BbuZS7_0276"
/note="G5 box; other site"
/db_xref="CDD:206746"
misc_feature complement(282199..282708)
/locus_tag="BbuZS7_0276"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(282670..282693)
/locus_tag="BbuZS7_0276"
/note="G1 box; other site"
/db_xref="CDD:206746"
gene complement(283237..285327)
/gene="flhA"
/locus_tag="BbuZS7_0277"
/db_xref="GeneID:7106523"
CDS complement(283237..285327)
/gene="flhA"
/locus_tag="BbuZS7_0277"
/note="membrane protein involved in the flagellar export
apparatus"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FlhA"
/protein_id="YP_002374794.1"
/db_xref="GI:218249415"
/db_xref="GeneID:7106523"
/translation="MDARKNSILGYLGLNNKSDLIISVGLIFVVAGFILPLPAVILDV
LITVNLVISLLIILIVLYSKRSLDFSVFPTLLLVMTIFGLVLNISSTRLILTKGINFD
GQMIRTFGTFVVGSSGIQGLVIGFIIFIIIIAVQFIVITKGATRVAEVAARFALDALP
GKQMAIDSAYSSGNLTEEEATRQKNDLQSEVNFYGAMDGASKFVSGNVKVGFLITLIN
ILGGLLVGITLQGLNFNEALNNYVSLTVGDGLVSQLPSLLISTSTGLIVTRSISKNSF
GGEIFDQFTNHLGIYWIVSGFLLFLAFLPGFPTLILMFLSLSIAFLAYSLSGIRQKEE
IDKKMKLEEEQASIYSDKDVSPVVPLDPLALEIGYNLVPIVDDTKTSELLDRIVKIRR
EIAFEFGIVVPKIRIVDNMRLEPNAYSFKLRGVEVGRGEIKLGKFLVINVGIDSGIDG
DLVKDPSFGLPSLWVNDDGRETAEKLGYTVVDPPSIIATHMTELIKRHSYEILTRQDV
QNTLDVFKKDYGAIVEEVLKNFSVGEIQRVLQGLLKEQVSIRNLVTIFETIADFTSIT
KDIFFLIEKCRQSVGRQITSGYLDLNSELNVITLNPSFEQMIIDSRVESNHDLISSID
PNLKTKFIYELFKIVNEVQAEGFYPVVLSSESSRPIIKVITSREIPDLVVMSVLEVPQ
NIKVNVLKTVEVEE"
misc_feature complement(283243..285327)
/gene="flhA"
/locus_tag="BbuZS7_0277"
/note="flagellar biosynthesis protein FlhA; Validated;
Region: flhA; PRK06012"
/db_xref="CDD:180350"
misc_feature complement(283270..285243)
/gene="flhA"
/locus_tag="BbuZS7_0277"
/note="FHIPEP family; Region: FHIPEP; pfam00771"
/db_xref="CDD:201434"
gene complement(285339..286457)
/gene="flhB"
/locus_tag="BbuZS7_0278"
/db_xref="GeneID:7106409"
CDS complement(285339..286457)
/gene="flhB"
/locus_tag="BbuZS7_0278"
/note="membrane protein responsible for substrate
specificity switching from rod/hook-type export to
filament-type export"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FlhB"
/protein_id="YP_002374795.1"
/db_xref="GI:218249479"
/db_xref="GeneID:7106409"
/translation="MIKDEFLIKSWYIPLDFFSADDEGRTELPTDQKKQKAREEGRVL
KSTEINTAVSLLLLFALFFFMLSYFALDLIAVFKEQAIKLPEVMRMSVYTMGFAYIRS
IMGYVVLFFFASLAVNFFVNIIQVGFFITFKSLEPRWDKISFNFSRWAKNSFFSAGAF
FNLFKSLLKVVIICLIYYFIIENNIGKISKLSEYTLQSGISIVLVIAYKICFFSVMFL
AIVGVFDYLFQRSQYIESLKMTKEEVKQERKEMEGDPLLRSRIKERMRVILSTNLRVA
IPQADVVITNPEHFAVAIKWDSETMLAPKVLAKGQDEIALTIKKIARENNVPLMENKL
LARALYANVKVNEEIPREYWEIVSKILVRVYSITKKFN"
misc_feature complement(285348..286388)
/gene="flhB"
/locus_tag="BbuZS7_0278"
/note="flagellar biosynthetic protein FlhB; Region: flhB;
TIGR00328"
/db_xref="CDD:129428"
misc_feature complement(285348..285587)
/gene="flhB"
/locus_tag="BbuZS7_0278"
/note="Uncharacterized homolog of the cytoplasmic domain
of flagellar protein FhlB [Function unknown]; Region:
COG2257"
/db_xref="CDD:32438"
gene complement(286457..287245)
/gene="fliR"
/locus_tag="BbuZS7_0279"
/db_xref="GeneID:7106556"
CDS complement(286457..287245)
/gene="fliR"
/locus_tag="BbuZS7_0279"
/note="identified by match to protein family HMM PF01311;
match to protein family HMM TIGR01400"
/codon_start=1
/transl_table=11
/product="flagellar biosynthetic protein FliR"
/protein_id="YP_002374796.1"
/db_xref="GI:218249562"
/db_xref="GeneID:7106556"
/translation="MNLNFLVLKSFTILPVLVRIFMFLKFSPFFSTIKIGYFNFFFSL
ILSVIVVEKIKIIYPLDNMLSFALILLGEAILGLIQAFFVNIIFNVFHLVGFFFSNQI
GLAYANIFDVFSEEDSMIISQIFAYLFLLLFLSSDFLLRFFVIGIHDSVLNIRVEHLV
NMRNSGFVKLLLMSFGFLFEKALLISFPILSLLLLFYLVLGILSKSSPQINLLIISFS
TSLFLGLLILYIGFPSLAISSKRVIELSLDSLASFLKLFSRVLK"
misc_feature complement(286493..287236)
/gene="fliR"
/locus_tag="BbuZS7_0279"
/note="Bacterial export proteins, family 1; Region:
Bac_export_1; cl00734"
/db_xref="CDD:186167"
gene complement(287278..287541)
/gene="fliQ"
/locus_tag="BbuZS7_0280"
/db_xref="GeneID:7106812"
CDS complement(287278..287541)
/gene="fliQ"
/locus_tag="BbuZS7_0280"
/note="identified by match to protein family HMM PF01313;
match to protein family HMM TIGR01402"
/codon_start=1
/transl_table=11
/product="flagellar biosynthetic protein FliQ"
/protein_id="YP_002374797.1"
/db_xref="GI:218249705"
/db_xref="GeneID:7106812"
/translation="MTAGHILYLIRISIENIIILSAPMLIIALIVGLLISIFQAITSI
QDQTLSFIPKIIVILLVIVIFGPWILNKLMQFTYMIFSQLQNV"
misc_feature complement(287281..>287481)
/gene="fliQ"
/locus_tag="BbuZS7_0280"
/note="flagellar biosynthetic protein FliQ; Region: fliQ;
TIGR01402"
/db_xref="CDD:130469"
gene complement(287550..288314)
/gene="fliP"
/locus_tag="BbuZS7_0281"
/db_xref="GeneID:7106878"
CDS complement(287550..288314)
/gene="fliP"
/locus_tag="BbuZS7_0281"
/note="FliP, with proteins FliQ and FliR, forms the core
of the central channel in the flagella export apparatus"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FliP"
/protein_id="YP_002374798.1"
/db_xref="GI:218249847"
/db_xref="GeneID:7106878"
/translation="MRKCFNFFLFFSVTSLSFAQTKSLQTTNGLNFPFLNFDSIGGSE
IAFSLQLLILLTIITLSPAFLVLMTSFLRISIVLDFIRRALSLQQSPPTQIVMGLALF
LTIFTMWPTFNSIYEQAYLPLKESKINFNEFYNKGIAPLRIFMYKQMSDGRHEEIRLF
MSMSNYDRPKNFSEVPTHVLIAAFILHELKVAFKMGILIFLPFIVLDIIVASVLMAMG
MIMLPPVMISLPFKLILFVMVDGWTLITSGLIKSFM"
misc_feature complement(287553..288221)
/gene="fliP"
/locus_tag="BbuZS7_0281"
/note="flagellar biosynthesis protein FliP; Reviewed;
Region: fliP; PRK05699"
/db_xref="CDD:180209"
gene complement(288325..288951)
/locus_tag="BbuZS7_0282"
/db_xref="GeneID:7106227"
CDS complement(288325..288951)
/locus_tag="BbuZS7_0282"
/note="possible structural component of the flagellum that
anchors the rod to the membrane"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FliZ"
/protein_id="YP_002374799.1"
/db_xref="GI:218249901"
/db_xref="GeneID:7106227"
/translation="MNNKFLFLVFLSFFNFFTYANSQEQVNSASTDLENESSLPIFEE
DKANFVNNDSTQPVSIFNISDLLKIVLFLLIAFFIFFLLKKLIFYSKKSKYEQNSNLI
KELVFYEIDVKNSIRIIKILDNVYIFLVSSNSFTLLKEIKSEEELEDLKLRLSKINDS
DKKDSFQSIFKKMLLKKEEIPSSGNDYVKLEEKIEASLKDKQDRLKKF"
misc_feature complement(288328..288900)
/locus_tag="BbuZS7_0282"
/note="flagellar biosynthesis protein FliZ; Provisional;
Region: PRK13414"
/db_xref="CDD:139556"
gene complement(288944..289285)
/locus_tag="BbuZS7_0283"
/db_xref="GeneID:7106361"
CDS complement(288944..289285)
/locus_tag="BbuZS7_0283"
/note="identified by match to protein family HMM PF01052;
match to protein family HMM TIGR02480"
/codon_start=1
/transl_table=11
/product="flagellar switch protein FliY"
/protein_id="YP_002374800.1"
/db_xref="GI:218249886"
/db_xref="GeneID:7106361"
/translation="MSVDEKSDNGEKPEIKGVKLPDLIDTLPEGVDPSNFGLLMDVSM
QLTVELGRTERKIKDILGMSEGTIITLDKLAGEPVDILVNGKIVAKGEVVVIDENFGV
RITEIIKTKNE"
misc_feature complement(288953..289183)
/locus_tag="BbuZS7_0283"
/note="flagellar motor switch protein FliN; Region: fliN;
TIGR02480"
/db_xref="CDD:131533"
gene complement(289331..290389)
/gene="fliM"
/locus_tag="BbuZS7_0284"
/db_xref="GeneID:7106345"
CDS complement(289331..290389)
/gene="fliM"
/locus_tag="BbuZS7_0284"
/note="with FliG and FliN makes up the switch complex
which is involved in switching the direction of the
flagella rotation"
/codon_start=1
/transl_table=11
/product="flagellar motor switch protein FliM"
/protein_id="YP_002374801.1"
/db_xref="GI:218249869"
/db_xref="GeneID:7106345"
/translation="MANNPGALSQDDIDSLLESINSSESLSLDESLSNVISSPTGKKQ
KVKVYDFKRPDKFSKEQVRTVSSFHEAFARYTTTSLSALLRKMVHVHVASVDQLTYEE
FIRSIPNPTTLAIINMDPLKGSAIFEVDPTIAFAIVDRLFGGDGDTIKDKSRDLTEIE
QSVMESVIIRILANMREAWSQVVDLRPRFGHIEVNPQFAQIVPPTEMIILVTLEVKIG
KVEGLMNFCLPYITIEPIVSKLSTRYWHSLIGVGTTSENLDALREKLENTAMPLVAEI
GEVKLKVREILSLDKGDVLNLESSLINKDLTLKVGTKEKFKCRMGLMGNKVSVQITEK
IGDIKGFDLLKELTEEVE"
misc_feature complement(289352..290287)
/gene="fliM"
/locus_tag="BbuZS7_0284"
/note="Flagellar motor switch protein [Cell motility and
secretion]; Region: FliM; COG1868"
/db_xref="CDD:32053"
misc_feature complement(289379..289609)
/gene="fliM"
/locus_tag="BbuZS7_0284"
/note="Surface presentation of antigens (SPOA); Region:
SpoA; pfam01052"
/db_xref="CDD:201573"
gene complement(290427..290963)
/gene="fliL"
/locus_tag="BbuZS7_0285"
/db_xref="GeneID:7106329"
CDS complement(290427..290963)
/gene="fliL"
/locus_tag="BbuZS7_0285"
/note="interacts with the cytoplasmic MS ring of the basal
body and may act to stabilize the MotAB complexes which
surround the MS ring"
/codon_start=1
/transl_table=11
/product="flagellar basal body-associated protein FliL"
/protein_id="YP_002374802.1"
/db_xref="GI:218249401"
/db_xref="GeneID:7106329"
/translation="MPNKDDDNLDMGDSNVSRKGGLLPDIIIKILQILAIGIFTVAIM
IIVSYFVSKMVVSQSGAPSDFPVFSNEYLGKPPMLIWYESIDEIRGNTLDVPPKTFVV
KLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEIKNESQIKAEIKARINSIL
RNGEIKEIALTQIDIFDM"
misc_feature complement(290430..290963)
/gene="fliL"
/locus_tag="BbuZS7_0285"
/note="flagellar basal body-associated protein FliL;
Reviewed; Region: fliL; PRK06654"
/db_xref="CDD:180646"
gene complement(291012..291794)
/gene="motB"
/locus_tag="BbuZS7_0286"
/db_xref="GeneID:7106393"
CDS complement(291012..291794)
/gene="motB"
/locus_tag="BbuZS7_0286"
/note="with MotA forms the ion channels that couple
flagellar rotation to proton/sodium motive force across
the membrane and forms the stator elements of the rotary
flagellar machine"
/codon_start=1
/transl_table=11
/product="flagellar motor protein MotB"
/protein_id="YP_002374803.1"
/db_xref="GI:218249216"
/db_xref="GeneID:7106393"
/translation="MALRIKKPSKCDEGSPDYMLTYGDMVTLLLVFFVTMFSLNDIIF
QENVIRIMSASFTGAGFFKGGKTLDFSKLSYLSNSFMSLPSTVRNKQASQTAKNKSMI
EFIEKIQSKNIVVRQEERGIVISLAADAFFDSASADVKLEENRDSIQKIASFIGFLSP
RGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQSDVKRIENNFEV
SGFGGSRPIATDDTPEGRAYNRRIDILITTDASLSFPKEIKQ"
misc_feature complement(291015..291794)
/gene="motB"
/locus_tag="BbuZS7_0286"
/note="flagellar motor protein MotB; Validated; Region:
motB; PRK06667"
/db_xref="CDD:180652"
misc_feature complement(<291669..291785)
/gene="motB"
/locus_tag="BbuZS7_0286"
/note="Membrane MotB of proton-channel complex MotA/MotB;
Region: MotB_plug; pfam13677"
/db_xref="CDD:205853"
misc_feature complement(291057..291371)
/gene="motB"
/locus_tag="BbuZS7_0286"
/note="Peptidoglycan binding domains similar to the
C-terminal domain of outer-membrane protein OmpA; Region:
OmpA_C-like; cd07185"
/db_xref="CDD:143586"
misc_feature complement(order(291075..291077,291087..291089,
291231..291233,291240..291245,291255..291257,
291279..291284))
/gene="motB"
/locus_tag="BbuZS7_0286"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:143586"
gene complement(291794..292576)
/locus_tag="BbuZS7_0287"
/db_xref="GeneID:7106756"
CDS complement(291794..292576)
/locus_tag="BbuZS7_0287"
/note="identified by match to protein family HMM PF01618"
/codon_start=1
/transl_table=11
/product="chemotaxis protein MotA"
/protein_id="YP_002374804.1"
/db_xref="GI:218249470"
/db_xref="GeneID:7106756"
/translation="MNLASIIGWGVGFGAILISMAFTPTGLGVFWDLSSVFITVVGSF
SALMASSEVVAVKKIPTYLGFFFRRNSYAKVSIIKILVELSEKARKEGLLSLDDELEQ
INDPFFKSGMRLVVDGADPEVIRTMLYLELDQMQERHKVGSDLFKTWAKLAPAFGMTG
TLIGLVALLGNLEDKSALGSSMAVALITTLYGTIMANLMFTPVQLKLEKIDTEEAAVK
TMIIEGVLSIQSGDNPRILEQKLMTFLTPKDRSQLNSSIGGE"
misc_feature complement(291797..292576)
/locus_tag="BbuZS7_0287"
/note="Flagellar motor component [Cell motility and
secretion]; Region: MotA; COG1291"
/db_xref="CDD:31482"
misc_feature complement(291827..292576)
/locus_tag="BbuZS7_0287"
/note="MotA/TolQ/ExbB proton channel family; Region:
MotA_ExbB; cl00568"
/db_xref="CDD:212236"
gene complement(292573..292797)
/locus_tag="BbuZS7_0288"
/db_xref="GeneID:7106547"
CDS complement(292573..292797)
/locus_tag="BbuZS7_0288"
/note="identified by match to protein family HMM PF06289"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374805.1"
/db_xref="GI:218249850"
/db_xref="GeneID:7106547"
/translation="MIFVTKLNGDGYYLNPYHIESIEANPDTTILLMNGKKLIVKEKV
EEVVNRIKLYRKEVASLEKILGEGNGGVEL"
misc_feature complement(292597..292797)
/locus_tag="BbuZS7_0288"
/note="Uncharacterized protein, possibly involved in
motility [Cell motility and secretion]; Region: FlgEa;
COG1582"
/db_xref="CDD:31770"
gene complement(292820..294148)
/gene="flgE"
/locus_tag="BbuZS7_0289"
/db_xref="GeneID:7106310"
CDS complement(292820..294148)
/gene="flgE"
/locus_tag="BbuZS7_0289"
/note="the hook connects flagellar basal body to the
flagellar filament"
/codon_start=1
/transl_table=11
/product="flagellar hook protein FlgE"
/protein_id="YP_002374806.1"
/db_xref="GI:218249383"
/db_xref="GeneID:7106310"
/translation="MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDM
ISQSISGASRPTDARGGTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFF
ILKEGKNLFYTRAGAFDVDSDRHLVNPANGMRIQGWMARDLEGEKVINTASDIEDLII
PIGDKEGAKSTKNVTFACNLDKRLPLIQEGANPADIARGTWVVNKSLYDSFGNVGVLE
LRVVKDLNTPNLWNATVLINGEQNSNFTLGFDNEGALASLNGQPGQKGDILQIPITFN
VLGANVGEVGEQQTVNLKLGTVGSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQ
NGVIVGIYSNGIRRDLGKIALASFMNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLG
DIRSGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLKN"
misc_feature complement(292826..294142)
/gene="flgE"
/locus_tag="BbuZS7_0289"
/note="flagellar hook protein FlgE; Validated; Region:
flgE; PRK05682"
/db_xref="CDD:180198"
misc_feature complement(294044..294136)
/gene="flgE"
/locus_tag="BbuZS7_0289"
/note="Flagella basal body rod protein; Region:
Flg_bb_rod; pfam00460"
/db_xref="CDD:109515"
misc_feature complement(293183..293578)
/gene="flgE"
/locus_tag="BbuZS7_0289"
/note="Flagellar basal body protein FlaE; Region: FlaE;
pfam07559"
/db_xref="CDD:203683"
misc_feature complement(292829..293062)
/gene="flgE"
/locus_tag="BbuZS7_0289"
/note="Flagellar basal body rod FlgEFG protein C-terminal;
Region: Flg_bbr_C; pfam06429"
/db_xref="CDD:203447"
gene complement(294153..294596)
/gene="flgD"
/locus_tag="BbuZS7_0290"
/db_xref="GeneID:7106680"
CDS complement(294153..294596)
/gene="flgD"
/locus_tag="BbuZS7_0290"
/note="acts as a scaffold for the assembly of hook
proteins onto the flagellar basal body rod"
/codon_start=1
/transl_table=11
/product="flagellar basal body rod modification protein"
/protein_id="YP_002374807.1"
/db_xref="GI:218249522"
/db_xref="GeneID:7106680"
/translation="MNKINGVENVFNLNISNKVKKKTDFNVDNISNKVNLGKDDFLKL
LITQLRYQDPTNPMKDKEFIAQMAQFSALEQMANMSRSFEKLSSSLEIRKDLDLLGKV
IKFQHGDGEIVEGRVTNIKTGAIPQVMVNGNYYVYKNILSVGLEE"
misc_feature complement(294156..294593)
/gene="flgD"
/locus_tag="BbuZS7_0290"
/note="flagellar basal body rod modification protein;
Provisional; Region: flgD; PRK09618"
/db_xref="CDD:181995"
misc_feature complement(294339..>294506)
/gene="flgD"
/locus_tag="BbuZS7_0290"
/note="Flagellar hook capping protein - N-terminal region;
Region: FlgD; pfam03963"
/db_xref="CDD:202834"
gene complement(294610..295788)
/locus_tag="BbuZS7_0291"
/db_xref="GeneID:7106599"
CDS complement(294610..295788)
/locus_tag="BbuZS7_0291"
/note="identified by match to protein family HMM PF02120"
/codon_start=1
/transl_table=11
/product="flagellar protein"
/protein_id="YP_002374808.1"
/db_xref="GI:218249321"
/db_xref="GeneID:7106599"
/translation="MSNLLNLSKAYGNKLNLLNTIEGLNLNVSKMESKGNASSFLNVM
SSESKKLAKAKFMIFDFLNFFKDNGLIAKNLKKSPLNKSFFLKKLENEDFVSDLKSLI
ARMNVFLDFEGLNSIKEDLSSNFDFLGKEKFFEKIEKLCLAFNDLSSFLGFDFLTALI
DDYYNQISLNDKKEEKNVINIDVKNFKKNNSDHNDFVFSKFSLNAIDGQNFVDRYKVK
EISNNSLKGFVEEFANYNIKSSKDVGGFDFVSSLKPEWNLKINKNIVDKAKVVLKSNN
TGEIKLVLKPKELGSIRINLNLDSNNNLLGKIVVDNQNVKMLFDQNMHSLNKMLGESG
FNASLNLFLAGENLNSFTGDFKDDSKDQNLHFGYNKFFKIEEEVEFSYDVDKNVNLIV
"
misc_feature complement(294781..294990)
/locus_tag="BbuZS7_0291"
/note="Flagellar hook-length control protein FliK; Region:
Flg_hook; pfam02120"
/db_xref="CDD:202116"
gene complement(295796..296413)
/locus_tag="BbuZS7_0292"
/db_xref="GeneID:7106615"
CDS complement(295796..296413)
/locus_tag="BbuZS7_0292"
/codon_start=1
/transl_table=11
/product="flagellar protein"
/protein_id="YP_002374809.1"
/db_xref="GI:218249394"
/db_xref="GeneID:7106615"
/translation="MNNFLSFFFRAFFLLFLIVILFFFVLFFIDFIGMYNTKRYFPEF
VRTKLLGETSLVFDHNSNIILDEARLVKEREAIDIKNQQIEKLKEDLKLKEDSLNKLE
FELKQKQKDLDLKQKVIDDIINKYNDEEANILQTAVYLMNMPPEDAVKRLEDLNPELA
ISYMRKIEELSKKEGRLSIVPYWLSLMDSKKAAILIRKMSVSSLE"
gene complement(296406..296837)
/locus_tag="BbuZS7_0293"
/db_xref="GeneID:7106692"
CDS complement(296406..296837)
/locus_tag="BbuZS7_0293"
/codon_start=1
/transl_table=11
/product="flagellar protein"
/protein_id="YP_002374810.1"
/db_xref="GI:218249532"
/db_xref="GeneID:7106692"
/translation="MNDLNFRKQKLNRILTIRTYFRKLSERDLMNINKKISKINQFSD
GIPNILKNLNGFNDLYIRGYIDCLNYKKTQNFKILEELRKHYNKCYDVYVDKYRQEKK
IKILIKNLNNSIIKNREKKESLLLDEHVNYKVCQNLRNESE"
gene complement(296834..298144)
/gene="fliI"
/locus_tag="BbuZS7_0294"
/db_xref="GeneID:7106609"
CDS complement(296834..298144)
/gene="fliI"
/locus_tag="BbuZS7_0294"
/EC_number="3.6.3.14"
/note="identified by match to protein family HMM PF00006;
match to protein family HMM PF02874; match to protein
family HMM TIGR01026; match to protein family HMM
TIGR03498"
/codon_start=1
/transl_table=11
/product="flagellar protein export ATPase FliI"
/protein_id="YP_002374811.1"
/db_xref="GI:218249447"
/db_xref="GeneID:7106609"
/translation="MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAIGDL
CLIDQRNGKKVCAEVLGFNGPYVSLMAYEGFNGIEVGNKVYSLNKGLEINLSDELLGR
VIDSLGRPIDNKGSFLNNSYKELIFEKINPINRSIFEDQILTGVKVLDGFLPVAKGQR
VGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLV
VSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLSLGEPPV
AKGYPPSVFVEIPILLERSGFNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHII
LDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIY
LKGSNKDVDFAISKYPKIINFISQGINETFDFENLEDEIKEILS"
misc_feature complement(296837..298144)
/gene="fliI"
/locus_tag="BbuZS7_0294"
/note="ATPase FliI/YscN family; Region: fliI_yscN;
TIGR01026"
/db_xref="CDD:162162"
misc_feature complement(297881..298075)
/gene="fliI"
/locus_tag="BbuZS7_0294"
/note="ATP synthase alpha/beta family, beta-barrel domain;
Region: ATP-synt_ab_N; cl15275"
/db_xref="CDD:210065"
misc_feature complement(296897..297877)
/gene="fliI"
/locus_tag="BbuZS7_0294"
/note="Flagellum-specific ATPase/type III secretory
pathway virulence-related protein. This group of ATPases
are responsible for the export of flagellum and
virulence-related proteins. The bacterial flagellar motor
is similar to the F0F1-ATPase, in that they...; Region:
ATPase_flagellum-secretory_path_III; cd01136"
/db_xref="CDD:30002"
misc_feature complement(297629..297649)
/gene="fliI"
/locus_tag="BbuZS7_0294"
/note="Walker A motif/ATP binding site; other site"
/db_xref="CDD:30002"
misc_feature complement(297380..297394)
/gene="fliI"
/locus_tag="BbuZS7_0294"
/note="Walker B motif; other site"
/db_xref="CDD:30002"
gene complement(298163..299083)
/gene="fliH"
/locus_tag="BbuZS7_0295"
/db_xref="GeneID:7106441"
CDS complement(298163..299083)
/gene="fliH"
/locus_tag="BbuZS7_0295"
/note="binds to and inhibits the function of flagella
specific ATPase FliI"
/codon_start=1
/transl_table=11
/product="flagellar assembly protein H"
/protein_id="YP_002374812.1"
/db_xref="GI:218249656"
/db_xref="GeneID:7106441"
/translation="MPKVLYKSSEVDNLVKFEFVEIAKPVFESLEIKEKESKVYDIES
QISNLKEELQLLRDEKLQLEEELAKRQELAKEEVQIESKRLIEEAKAKANEVLEAAKQ
EADLLQKEAIYKKESIETESNAEIERLAREYEEKLKTDLDIAIAKGREEGYSKGYESG
FEDFDKVMRKLHAIIASLIAERKGILESSSGQIVSLVMQIAIKVIKRITDSQKDIVLE
NVNEVLKRVKDKTQITIRVNLDDLDIVRHKKSDFISRFDIIENLEIIEDPNIGKGGCI
IETNFGEIDARISSQLDKIEEKFKNFSLLS"
misc_feature complement(298175..299083)
/gene="fliH"
/locus_tag="BbuZS7_0295"
/note="flagellar assembly protein H; Validated; Region:
fliH; PRK06669"
/db_xref="CDD:180653"
misc_feature complement(298664..>298843)
/gene="fliH"
/locus_tag="BbuZS7_0295"
/note="The band 7 domain of flotillin (reggie) like
proteins. This group contains proteins similar to
stomatin, prohibitin, flotillin, HlfK/C and podicin. Many
of these band 7 domain-containing proteins are lipid
raft-associated. Individual proteins of this...; Region:
Band_7; cl02525"
/db_xref="CDD:207629"
misc_feature complement(298199..298591)
/gene="fliH"
/locus_tag="BbuZS7_0295"
/note="Flagellar assembly protein FliH; Region: FliH;
pfam02108"
/db_xref="CDD:111047"
gene complement(299098..300132)
/gene="fliG"
/locus_tag="BbuZS7_0296"
/db_xref="GeneID:7106116"
CDS complement(299098..300132)
/gene="fliG"
/locus_tag="BbuZS7_0296"
/note="One of three proteins involved in switching the
direction of the flagellar rotation"
/codon_start=1
/transl_table=11
/product="flagellar motor switch protein G"
/protein_id="YP_002374813.1"
/db_xref="GI:218249728"
/db_xref="GeneID:7106116"
/translation="MEEKKEKEILDVSALTGKQKAAILLVSIGSEISSKVFKYLSQEE
IESLTFEIAKLETITSELKDNVLLEFKELMMAQEFIQKGGIDYARELLEKSLGTQKAV
DIINNLGSALQSRPFEFVRRADPANILNFIQQEHPQTIALILSYLDPQKASFILSSLP
TEVQTNVARRIALMDRTSPEVVREVERVLEKKLASLSSEDYTSAGGVDNVVEIINMAD
RKTEKFIIESLEEEDPELAEEIKKKMFVFEDIVLLDDRSIQRVLREIDGQELAKALKS
VDIPVQEKIFKNMSKRAASMLKEDMEFLGPTRRKDVEESQQKIVSLIRKLEEQGEIVI
SRGGEEDVLV"
misc_feature complement(299101..300102)
/gene="fliG"
/locus_tag="BbuZS7_0296"
/note="flagellar motor switch protein FliG; Region: fliG;
TIGR00207"
/db_xref="CDD:161765"
misc_feature complement(299131..299412)
/gene="fliG"
/locus_tag="BbuZS7_0296"
/note="FliG C-terminal domain; Region: FliG_C; pfam01706"
/db_xref="CDD:190075"
gene complement(300148..301857)
/gene="fliF"
/locus_tag="BbuZS7_0297"
/db_xref="GeneID:7106901"
CDS complement(300148..301857)
/gene="fliF"
/locus_tag="BbuZS7_0297"
/note="the MS-ring anchors the flagellum to the
cytoplasmic membrane; part of the flagellar basal body
which consists of four rings L, P, S, and M mounted on a
central rod"
/codon_start=1
/transl_table=11
/product="flagellar MS-ring protein"
/protein_id="YP_002374814.1"
/db_xref="GI:218249820"
/db_xref="GeneID:7106901"
/translation="MSKFFTNFFVSAKGIFKKASTVQKIALGLIIFFVILALVFLIGF
STKSQSIALFGVEIKDQYLLDRISQRLDRENVKYFLSSDGRIYLDDEKLAKKMRAILV
REELVPVHMDPWALFDIDRWTITDFERSINLRRSITRAVEQHIVALDDVDAVSVNLVM
PEKALFKESQEPVKASVRITPRPGSDIITNRKKVEGLVKLIQYAIEGLESDNIAIVDN
SGTILNDFSNLDGIDRIDLAEKERKLKLKYEAMLRGEIDSALSKVLSVDRFMIARVNV
KLDTSKETTESKEYAPIELQSQDPKASYNTRKVSDSTIISSQTQKKEYQGQGYSPWGP
PGQEGNTPPEYQDLSDITGKYNESQEIKNVALNEKKSTSEKEPARIVGVSLGIFVDGI
WNFVYDEKGDFVIENGMRKREYKPMALEEIKNIEDVLQSSFEYKPERGDSITVRNISF
DRMNEFREIDENYFASERFKYFLFIASIVFSLLILVFTIFFAISRELERRRRLREEEL
AKQAHLRRQQALMDGGDDIGVDDVVGGIREGDELQSNAELLAREKPEDVAKLIRTWLL
KNA"
misc_feature complement(300151..301857)
/gene="fliF"
/locus_tag="BbuZS7_0297"
/note="flagellar basal-body M-ring protein/flagellar
hook-basal body protein (fliF); Region: fliF; TIGR00206"
/db_xref="CDD:129310"
misc_feature complement(301183..301788)
/gene="fliF"
/locus_tag="BbuZS7_0297"
/note="Secretory protein of YscJ/FliF family; Region:
YscJ_FliF; cl01907"
/db_xref="CDD:199376"
misc_feature complement(300508..301080)
/gene="fliF"
/locus_tag="BbuZS7_0297"
/note="Flagellar M-ring protein C-terminal; Region:
YscJ_FliF_C; pfam08345"
/db_xref="CDD:192009"
gene complement(301872..302207)
/gene="fliE"
/locus_tag="BbuZS7_0298"
/db_xref="GeneID:7106200"
CDS complement(301872..302207)
/gene="fliE"
/locus_tag="BbuZS7_0298"
/note="forms a junction between the M-ring and FlgB during
flagella biosynthesis"
/codon_start=1
/transl_table=11
/product="flagellar hook-basal body protein FliE"
/protein_id="YP_002374815.1"
/db_xref="GI:218249375"
/db_xref="GeneID:7106200"
/translation="MVRTDAFFTENNINLVKKNPLHFDVNLFSSKSNAKDNDIKTFKD
VLINSITDVNKSQLNVSKVTEQAILKPSSIDVHDVVIAMSKANMNLSILKAVVERGVK
AYQDIINIR"
misc_feature complement(301875..302198)
/gene="fliE"
/locus_tag="BbuZS7_0298"
/note="flagellar hook-basal body protein FliE; Reviewed;
Region: fliE; PRK01482"
/db_xref="CDD:134562"
gene complement(302219..302677)
/gene="flgC"
/locus_tag="BbuZS7_0299"
/db_xref="GeneID:7106672"
CDS complement(302219..302677)
/gene="flgC"
/locus_tag="BbuZS7_0299"
/note="with FlgF and B makes up the proximal portion of
the flagellar basal body rod"
/codon_start=1
/transl_table=11
/product="flagellar basal body rod protein FlgC"
/protein_id="YP_002374816.1"
/db_xref="GI:218249308"
/db_xref="GeneID:7106672"
/translation="MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRR
QRIIFAPRVNNPYWKGPFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSG
DKKGYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQG"
misc_feature complement(302222..302677)
/gene="flgC"
/locus_tag="BbuZS7_0299"
/note="flagellar basal body rod protein FlgC; Reviewed;
Region: flgC; PRK05681"
/db_xref="CDD:180197"
misc_feature complement(302579..302659)
/gene="flgC"
/locus_tag="BbuZS7_0299"
/note="Flagella basal body rod protein; Region:
Flg_bb_rod; pfam00460"
/db_xref="CDD:109515"
misc_feature complement(302231..>302362)
/gene="flgC"
/locus_tag="BbuZS7_0299"
/note="Flagellar basal body rod FlgEFG protein C-terminal;
Region: Flg_bbr_C; pfam06429"
/db_xref="CDD:203447"
gene complement(302701..303108)
/gene="flgB"
/locus_tag="BbuZS7_0300"
/db_xref="GeneID:7106518"
CDS complement(302701..303108)
/gene="flgB"
/locus_tag="BbuZS7_0300"
/note="with FlgF and C makes up the proximal portion of
the flagellar basal body rod"
/codon_start=1
/transl_table=11
/product="flagellar basal body rod protein FlgB"
/protein_id="YP_002374817.1"
/db_xref="GI:218249205"
/db_xref="GeneID:7106518"
/translation="MNDFERSVDFSHRYLDVLSLRQSVISDNIANVDTPNFKRSKISF
ESELEKAFLNEDKNDLNLIKSSDKHLSGFKNLKYSDVKPHRVLDHFSTMNNNGNNVDI
DSEVKALVQNQMMYHLMTNVQAHYFKSINIVLK"
misc_feature complement(302704..303108)
/gene="flgB"
/locus_tag="BbuZS7_0300"
/note="flagellar basal body rod protein FlgB; Provisional;
Region: flgB; PRK12622"
/db_xref="CDD:183629"
misc_feature complement(302995..>303066)
/gene="flgB"
/locus_tag="BbuZS7_0300"
/note="Flagella basal body rod protein; Region:
Flg_bb_rod; cl16922"
/db_xref="CDD:211518"
gene complement(303142..304488)
/gene="hslU"
/locus_tag="BbuZS7_0301"
/db_xref="GeneID:7106744"
CDS complement(303142..304488)
/gene="hslU"
/locus_tag="BbuZS7_0301"
/note="heat shock protein involved in degradation of
misfolded proteins"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease ATP-binding subunit HslU"
/protein_id="YP_002374818.1"
/db_xref="GI:218249642"
/db_xref="GeneID:7106744"
/translation="MNKLEEHYIIPKDVVAELDKYIIGQDEAKKLVSIALVNRYIRSR
LPKEIKDEVMPKNIIMIGSTGIGKTEIARRLSKLIKAPFIKVEATKYTEVGYVGRDVE
SMVRDLMGIAVNMVKEEMYSTVREDALIKTEERIVESLFKGSGNSENIDPNEIKAEEK
VKEKLRKKLRAGELDDTTIEIQISSKMPFSTIEIFTGGNFEEIDMGIGGLLGNIFDRK
KKRELKIKKAKEIILAEELEKLVDHENISDIAKSKVENMGIIFIDEIDKIAAKNRSGN
DVSREGVQRDILPIIEGSKVNTKYGIVDTSHILFIAAGAFNLAKPSDLIPELQGRFPI
KVELKSLSIDDLKKILKQTKNSLIKQYVAMFKVYDLDLKFSEEAIDRIAELTFNMNLE
SENLGARRLHGVMEIVLADLFFEVPGSKLKKFEINLDYVNKKIQINEQKDLNYYII"
misc_feature complement(303148..304458)
/gene="hslU"
/locus_tag="BbuZS7_0301"
/note="ATP-dependent protease ATP-binding subunit HslU;
Provisional; Region: hslU; PRK05201"
/db_xref="CDD:179962"
misc_feature complement(<304138..304350)
/gene="hslU"
/locus_tag="BbuZS7_0301"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(304282..304305)
/gene="hslU"
/locus_tag="BbuZS7_0301"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(304279..304302)
/gene="hslU"
/locus_tag="BbuZS7_0301"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(303487..>303717)
/gene="hslU"
/locus_tag="BbuZS7_0301"
/note="AAA domain (Cdc48 subfamily); Region: AAA_2;
pfam07724"
/db_xref="CDD:203740"
misc_feature complement(303697..303714)
/gene="hslU"
/locus_tag="BbuZS7_0301"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(303496..303498)
/gene="hslU"
/locus_tag="BbuZS7_0301"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature complement(303178..303468)
/gene="hslU"
/locus_tag="BbuZS7_0301"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; smart01086"
/db_xref="CDD:198154"
gene complement(304481..305029)
/locus_tag="BbuZS7_0302"
/db_xref="GeneID:7106102"
CDS complement(304481..305029)
/locus_tag="BbuZS7_0302"
/EC_number="3.4.25.1"
/note="heat shock protein involved in degradation of
misfolded proteins"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease peptidase subunit"
/protein_id="YP_002374819.1"
/db_xref="GI:218249363"
/db_xref="GeneID:7106102"
/translation="MSFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLN
GKILAGFAGSTSDAITLFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAM
MLVADSNNILLISGTGDVVEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSL
KIAARVCIYTNSNIVLEEIENE"
misc_feature complement(304493..305014)
/locus_tag="BbuZS7_0302"
/note="Protease HslV and the ATPase/chaperone HslU are
part of an ATP-dependent proteolytic system that is the
prokaryotic homolog of the proteasome. HslV is a dimer of
hexamers (a dodecamer) that forms a central proteolytic
chamber with active sites on the...; Region:
protease_HslV; cd01913"
/db_xref="CDD:48442"
misc_feature complement(order(304634..304636,304916..304918,
304958..304960,304964..304966,305012..305014))
/locus_tag="BbuZS7_0302"
/note="active site"
/db_xref="CDD:48442"
misc_feature complement(order(304526..304528,304532..304537,
304544..304546,304556..304558,304589..304591,
304613..304615,304622..304627,304664..304666,
304676..304678,304757..304759,304937..304945))
/locus_tag="BbuZS7_0302"
/note="HslU subunit interaction site [polypeptide
binding]; other site"
/db_xref="CDD:48442"
gene complement(305038..305982)
/locus_tag="BbuZS7_0303"
/db_xref="GeneID:7106660"
CDS complement(305038..305982)
/locus_tag="BbuZS7_0303"
/note="identified by match to protein family HMM PF02481;
match to protein family HMM TIGR00732"
/codon_start=1
/transl_table=11
/product="protein smf"
/protein_id="YP_002374820.1"
/db_xref="GI:218249856"
/db_xref="GeneID:7106660"
/translation="MKLLYIDNLKFLKGKEKLKLFNNFDFNNVIKLTQKDIESYFLKS
FRRLFKLPDLKLVELQEKVIQRTKAKVAILGSKSYPNKLKRIYDPPFAIYYKGNLPDC
SLLSWAVVGSRKISKTLAERTREFSSHLAKNGVEIISGFAIGADIEAHIAAINENKRT
FAVIPTDIDNIYPRQNRKYVSKLLEQGGGIITETLPFDKIQNYFFAKRNRLVSGLSDA
IFITYAPLKSGALITAELGLDLGLDVYVYDLDFCGDGAVKLHDFGAQEIKTVKDLYAL
LNIKYVDSNNIKDDSKECCDCKNVSDVLIGELLKEVYK"
misc_feature complement(305041..305892)
/locus_tag="BbuZS7_0303"
/note="Predicted Rossmann fold nucleotide-binding protein
involved in DNA uptake [DNA replication, recombination,
and repair / Intracellular trafficking and secretion];
Region: Smf; COG0758"
/db_xref="CDD:31101"
misc_feature complement(305152..305802)
/locus_tag="BbuZS7_0303"
/note="DNA protecting protein DprA; Region: dprA;
TIGR00732"
/db_xref="CDD:129815"
gene complement(305992..306684)
/locus_tag="BbuZS7_0304"
/db_xref="GeneID:7106316"
CDS complement(305992..306684)
/locus_tag="BbuZS7_0304"
/note="identified by match to protein family HMM PF00515;
match to protein family HMM PF07719"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374821.1"
/db_xref="GI:218249595"
/db_xref="GeneID:7106316"
/translation="MKILWLIILVNLFLSCGNESKEKSNLGLRLRELEISGGGSESKI
EVYKEFIEKEDKNILKIVNSIDKKARFFNLIGLEFFKLGQYGPAIEYFAKNLEINPNN
YLSHFYIGVASYNLAKNLRVKDEVEKYIILAENSFLKSLSIRDDFKDSLFAISNMYVY
DLDKQLEAKNYLNKLGDMGEDYFEFLMLRGANYYSLGDLGNAILFYDKASKKASTEEQ
KEGVSRIMSNLK"
misc_feature complement(<306328..306486)
/locus_tag="BbuZS7_0304"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(306379..306480)
/locus_tag="BbuZS7_0304"
/note="Tetratricopeptide repeat; Region: TPR_1; pfam00515"
/db_xref="CDD:201277"
misc_feature complement(order(306199..306204,306214..306219,
306226..306231,306340..306345,306352..306357,
306361..306366,306451..306456,306463..306468))
/locus_tag="BbuZS7_0304"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(306169..306171,306181..306183,
306220..306222,306265..306267,306274..306276,
306286..306288,306355..306357,306400..306402,
306409..306411,306421..306423,306457..306459))
/locus_tag="BbuZS7_0304"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene complement(306685..307884)
/gene="ftsZ"
/locus_tag="BbuZS7_0305"
/db_xref="GeneID:7106846"
CDS complement(306685..307884)
/gene="ftsZ"
/locus_tag="BbuZS7_0305"
/note="GTPase; similar structure to tubulin; forms
ring-shaped polymers at the site of cell division; other
proteins such as FtsA, ZipA, and ZapA, interact with and
regulate FtsZ function"
/codon_start=1
/transl_table=11
/product="cell division protein FtsZ"
/protein_id="YP_002374822.1"
/db_xref="GI:218249250"
/db_xref="GeneID:7106846"
/translation="MKDYNMIDSHTRRFDSTTNPTILKVIGAGGGGSNAVNRMIEYGV
RDVEFIVANTDLQALQTSIAPIKIALGAKVTAGLGAGGKPEIGQAAAEEDIDVIRNHL
SGADMVFITAGMGGGTGTGAAPVIAQVAKELGILTVGVVTKPFKFEGPKKLRLAEQGI
NNLRKSVDTLIIIPNQKLLTVVDKRTTIKDAFKRADDVLRMGVQGIAGLIIEHGEVNI
DFADVKSIMQGQGDALMGIGYGKGENRAVDAATSAISNPLLEEVRIEGSKGLLVNVTG
GDDFSLLELEEIMGIITVSVDDEATVIYGHAINSNLEDEIYVTVVATGFASKKQKEIS
SAPENNTLSSKEFDTLMSGNQNAPSGSYEQQDSSFAAKSKNVNYFDDDIDVPTFLRNL
NKKSSDD"
misc_feature complement(306703..307842)
/gene="ftsZ"
/locus_tag="BbuZS7_0305"
/note="cell division protein FtsZ; Validated; Region:
PRK09330"
/db_xref="CDD:181781"
misc_feature complement(306913..307824)
/gene="ftsZ"
/locus_tag="BbuZS7_0305"
/note="FtsZ is a GTPase that is similar to the eukaryotic
tubulins and is essential for cell division in
prokaryotes. FtsZ is capable of polymerizing in a
GTP-driven process into structures similar to those formed
by tubulin. FtsZ forms a ring-shaped septum at...; Region:
FtsZ_type1; cd02201"
/db_xref="CDD:100021"
misc_feature complement(order(307288..307290,307297..307302,
307309..307311,307360..307362,307429..307431,
307450..307455,307528..307548,307711..307713,
307783..307785,307792..307800))
/gene="ftsZ"
/locus_tag="BbuZS7_0305"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:100021"
misc_feature complement(order(307030..307032,307039..307050,
307228..307230,307234..307239))
/gene="ftsZ"
/locus_tag="BbuZS7_0305"
/note="SulA interaction site; other site"
/db_xref="CDD:100021"
gene complement(307906..309147)
/gene="ftsA"
/locus_tag="BbuZS7_0306"
/db_xref="GeneID:7106459"
CDS complement(307906..309147)
/gene="ftsA"
/locus_tag="BbuZS7_0306"
/note="identified by match to protein family HMM PF02491;
match to protein family HMM TIGR01174"
/codon_start=1
/transl_table=11
/product="cell division protein FtsA"
/protein_id="YP_002374823.1"
/db_xref="GI:218249807"
/db_xref="GeneID:7106459"
/translation="MSRNLIVGLDVGTSKICTVVAEVNLNDQLEIVGIGTSISRGVRK
GVLINIEAALDSISNSIEAAELISGCDITSLSVSMSGSSVEGTNSRGVVAINSKTREI
NEEDVERVIEAAKAIVIPMDREILHVIPQEFIVDGIPHIKNPIDMMGIRLEGEVHIIT
GSSSSSQNLVRCVNRAGFAVDEVVLGSLASSYATLSKEEREMGVLFIDMGKGTTDIIL
YIDGSPYYTGVIPIGVNRVTLDIAQVWKVPEDVAENIKITAGIAHPSILESQMETVII
PNLGTRPPQEKSRKELSVIINSRLREIFEMMKAEILKRGLYNKINGGIVLTGGGALFP
GISNLIEEVFNYPARIGLPMSINGIGEEHIDPKFSSALGLVLYKHEQQKFNKLKKVSS
KVKRKNKISSKLKGWFLKEWF"
misc_feature complement(308017..309135)
/gene="ftsA"
/locus_tag="BbuZS7_0306"
/note="cell division protein FtsA; Region: ftsA;
TIGR01174"
/db_xref="CDD:162236"
misc_feature complement(308566..309132)
/gene="ftsA"
/locus_tag="BbuZS7_0306"
/note="Cell division protein FtsA; Region: FtsA;
smart00842"
/db_xref="CDD:197910"
misc_feature complement(308095..308538)
/gene="ftsA"
/locus_tag="BbuZS7_0306"
/note="Cell division protein FtsA; Region: FtsA;
pfam14450"
/db_xref="CDD:206616"
gene complement(309147..309890)
/locus_tag="BbuZS7_0307"
/db_xref="GeneID:7106186"
CDS complement(309147..309890)
/locus_tag="BbuZS7_0307"
/note="identified by match to protein family HMM PF08478"
/codon_start=1
/transl_table=11
/product="DivIB"
/protein_id="YP_002374824.1"
/db_xref="GI:218249428"
/db_xref="GeneID:7106186"
/translation="MIFERKFLIKYIYFLTSLIFFEIIIIIFASPYFLIRYISINNDI
SLSKEDIIKISGIKPNTYYHNANVRIYEENLKKDLRVKNVKVDLKFPNKINIKIEKRI
PIAVALENVNGNITYYCIASDGVILEKSKHLIYDLPVISGLVLNDNNVGDFLEDRMLN
IVRGLDYLKINQKYLYNLISEVNFLKLNFYDYNVILYIKSIYNKILITVDMNLMDVMH
KVFLAVNLLKGKPGVIDLRSGDIILLGES"
misc_feature complement(309150..309890)
/locus_tag="BbuZS7_0307"
/note="Cell division septal protein [Cell envelope
biogenesis, outer membrane]; Region: FtsQ; COG1589"
/db_xref="CDD:31777"
misc_feature complement(309588..309788)
/locus_tag="BbuZS7_0307"
/note="POTRA domain, FtsQ-type; Region: POTRA_1;
pfam08478"
/db_xref="CDD:149506"
gene complement(309926..310984)
/gene="ftsW"
/locus_tag="BbuZS7_0308"
/db_xref="GeneID:7106422"
CDS complement(309926..310984)
/gene="ftsW"
/locus_tag="BbuZS7_0308"
/note="identified by match to protein family HMM PF01098;
match to protein family HMM TIGR02614"
/codon_start=1
/transl_table=11
/product="cell division protein FtsW"
/protein_id="YP_002374825.1"
/db_xref="GI:218249635"
/db_xref="GeneID:7106422"
/translation="MLVLLLLVAYGLVVFYTSSFFLSLELTGNPNFLFFTRLNYLFLS
FMVFLVFERISLNFLKKSIFPVLIITLFLIMATFLSPSISGAKRWIFFQGVSIQPSEI
FKISFTIYLSAYLSKFDPRKNNGISYWIKPMLIFAIFWVLIILQNDYSTAIYFAILFF
IVLFVSNMAFSYVFAIVVTFLPVSAIFLMLEPYRVSRIFAFLNPYDDPSGKGYQIIAS
LNALKSGGILGKGLGMGEVKLGKLPEANSDFIFSVLGEELGFLGVLFAISLFFLFFYF
GYFIAIHSNSRFKFFIAFISSLAIFLQSMMNILIAIGLLPPTGINLPFFSSGGSSIIV
TMALSGLISNVSKNLSNN"
misc_feature complement(309932..310942)
/gene="ftsW"
/locus_tag="BbuZS7_0308"
/note="Cell cycle protein; Region: FTSW_RODA_SPOVE;
pfam01098"
/db_xref="CDD:110122"
gene complement(311027..312082)
/gene="mraY"
/locus_tag="BbuZS7_0309"
/db_xref="GeneID:7106094"
CDS complement(311027..312082)
/gene="mraY"
/locus_tag="BbuZS7_0309"
/EC_number="2.7.8.13"
/note="First step of the lipid cycle reactions in the
biosynthesis of the cell wall peptidoglycan"
/codon_start=1
/transl_table=11
/product="phospho-N-acetylmuramoyl-pentapeptide-
transferase"
/protein_id="YP_002374826.1"
/db_xref="GI:218249637"
/db_xref="GeneID:7106094"
/translation="MFYLLGLRLLKYITFRMAYATIFAFLLSLIVGPYIILKLKKLRA
DQILREDGPKRHLSEKAGIPTMGGILIFFCVFISLVFWSNILNVYFLIMVFVMLGFAF
LGFIDDFLKIKKKTSDGLKARFKIYGQIIFSFFSVGILYYFGGEHVSVIYFPFIKSFQ
IDLGLFYIPFGMFILISASNSFNLTDGLDGLAIGLSIVITGALIIIAYLTSRADFAAY
LHIPNIKGSEELVIFLGALLGGSFGFLWFNAYPAKIMMGDTGSLALGAILGMAALILK
SEILFSILAGVFIIETMSVIIQVLVYKKTKKRVFKMAPLHHHFEELGWSEMQVVIRFW
IIGLIFAIIALSTIKIR"
misc_feature complement(311030..312001)
/gene="mraY"
/locus_tag="BbuZS7_0309"
/note="phospho-N-acetylmuramoyl-pentapeptide-transferase;
Region: mraY; TIGR00445"
/db_xref="CDD:161884"
misc_feature complement(311042..311929)
/gene="mraY"
/locus_tag="BbuZS7_0309"
/note="Phospho-N-acetylmuramoyl-pentapeptide-transferase
(mraY) is an enzyme responsible for the formation of the
first lipid intermediate in the synthesis of bacterial
cell wall peptidoglycan. It catalyzes the formation of...;
Region: GT_MraY; cd06852"
/db_xref="CDD:133462"
misc_feature complement(311759..311764)
/gene="mraY"
/locus_tag="BbuZS7_0309"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:133462"
misc_feature complement(311309..311320)
/gene="mraY"
/locus_tag="BbuZS7_0309"
/note="putative catalytic motif [active]"
/db_xref="CDD:133462"
misc_feature complement(order(311129..311143,311159..311161))
/gene="mraY"
/locus_tag="BbuZS7_0309"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:133462"
gene complement(312100..313491)
/locus_tag="BbuZS7_0310"
/db_xref="GeneID:7106096"
CDS complement(312100..313491)
/locus_tag="BbuZS7_0310"
/EC_number="6.3.2.10"
/note="identified by match to protein family HMM PF02875;
match to protein family HMM PF08245; match to protein
family HMM TIGR01143"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
alanine ligase"
/protein_id="YP_002374827.1"
/db_xref="GI:218249487"
/db_xref="GeneID:7106096"
/translation="MRIKIKDILISSKDVKFVGNIKNIERVVSFYSLDSREIKDDNIN
DSLYFAYKGNKVDGFSFVKYLIDLGVKCFACSREHESECIKYLNDNEGLVFLLTSNVI
KLLQALASFLIEKTSFKRIAITGSNGKTTTKEMLYSILSKKYKTYKTWGNLNSDIGLP
LSILRVEGNEEYAVFEVGVSYVGEMDLLSQILKPEIVIITNISYAHMQAFKELQAIAF
EKSKIIGKNIEIFVVNEMNDYCVYLEKRAKIANPNVKIVYFDFENLSIKSFSFLDGKF
SFDFVYKGFEYSILLLGRHNIFNAIGCINLALFLGMREKEIKEGLIETAFQKGRAEIL
TKNGYLILNDSYNGNMGSFMALKNMILDLNIQNKKFIVLGAFKELGELAYKTHKDLIQ
EAISMNFDKIFLIGEEFLDVRDSENLVEKCLYYFSEFDKFIDFFLKSLEPSVFIVIKG
SRFNRLERILNYI"
misc_feature complement(313159..313413)
/locus_tag="BbuZS7_0310"
/note="Mur ligase family, catalytic domain; Region:
Mur_ligase; pfam01225"
/db_xref="CDD:201670"
misc_feature complement(312106..313395)
/locus_tag="BbuZS7_0310"
/note="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
ligase; Region: murF; TIGR01143"
/db_xref="CDD:200077"
misc_feature complement(312601..313122)
/locus_tag="BbuZS7_0310"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature complement(312238..312510)
/locus_tag="BbuZS7_0310"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene complement(313514..313729)
/locus_tag="BbuZS7_0311"
/db_xref="GeneID:7106564"
CDS complement(313514..313729)
/locus_tag="BbuZS7_0311"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374828.1"
/db_xref="GI:218249439"
/db_xref="GeneID:7106564"
/translation="MCFNIYLNFRYVVKLREFNHLDNEQENIIDDNLRLLTVIYELEN
IDRIESFCFGELNLEKKANEDINIFVE"
gene complement(313792..314682)
/gene="mraW"
/locus_tag="BbuZS7_0312"
/db_xref="GeneID:7106433"
CDS complement(313792..314682)
/gene="mraW"
/locus_tag="BbuZS7_0312"
/EC_number="2.1.1.-"
/note="identified by match to protein family HMM PF01795;
match to protein family HMM TIGR00006"
/codon_start=1
/transl_table=11
/product="S-adenosyl-methyltransferase MraW"
/protein_id="YP_002374829.1"
/db_xref="GI:218249331"
/db_xref="GeneID:7106433"
/translation="MNNNAFHFPVLLDAICKLIEDLPVKSDLIYIDSTLGEGVHAKAI
LEKYDFLSLVGIERDPQILERARQFLSIFEERITYFNDWFDNFFVNYPLNVKANFILV
DLGISMFHYKGSKKGFSFLEDEPLDMRLCSSSCKISAAEIVNTYSKYDLEALIYDLSN
EHYSRRISKAIVEYRKIKKIETTKELQSIISKVYPFSKVKINPATKTFQALRIYVNDE
LARLKRSLPFWVENLAKDGILAIITFHSIEDRIVKDFFRSLSCDLYAKISKKPIMPSF
DEIKKNKPSRSAKLRVIKKL"
misc_feature complement(313795..314682)
/gene="mraW"
/locus_tag="BbuZS7_0312"
/note="Predicted S-adenosylmethionine-dependent
methyltransferase involved in cell envelope biogenesis
[Cell envelope biogenesis, outer membrane]; Region:
COG0275"
/db_xref="CDD:30623"
misc_feature complement(313795..314673)
/gene="mraW"
/locus_tag="BbuZS7_0312"
/note="S-adenosyl-methyltransferase MraW; Region:
TIGR00006"
/db_xref="CDD:161660"
gene complement(314675..315511)
/locus_tag="BbuZS7_0313"
/db_xref="GeneID:7106626"
CDS complement(314675..315511)
/locus_tag="BbuZS7_0313"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374830.1"
/db_xref="GI:218249276"
/db_xref="GeneID:7106626"
/translation="MILIVFIFFFNILDLYSFLEFRNDEKFALVKDFGVLDNNKLNIS
LRLRPLEKTVSVFSNNYKILYSKNSLNRDGSILIIFDNDLNLNLEVFGGFLYKLGKIF
LKDEKSVIDLVVNDPSAKKIINPLFIIKNRNNVVAETVYTLGRVFLKGKGDDERLELS
KNINLNVDSGQYSLLLYFHTQKVESFENSLKGIYYFEAILNNKSILRSDFQNIFLIND
THTLAQEKNYGLDILNIKKDGGCLKINDLNFVKGKNELKIKYGDVYGNEKKIIYRFKL
NE"
gene complement(315508..316584)
/locus_tag="BbuZS7_0314"
/db_xref="GeneID:7106486"
CDS complement(315508..316584)
/locus_tag="BbuZS7_0314"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374831.1"
/db_xref="GI:218249927"
/db_xref="GeneID:7106486"
/translation="MSFNVEEGTIKFKKLKFFLILSLFLLFIILIDFFIRSTMNVSNF
YDFKNFENKSDCKNINLSKNVFVSNKVLSLNFGESCYSLLSDSLISYSDYYYVLFNSG
EDYSVFSVKNNKFLFTLKLKDFVFAINNLIFTLNNLYKTLEVYDSSGNNILMLNFLSS
ILSVDYNNEVLVLGLSNGEIYIYKQGKIIYMENFLERKFPTCFVKLSSDNKYLVSLKG
SSEYFLEIIDLENNYKKILELNNLTINSFETFIKIDDYHNLFIEGKNSLAVINIKSGR
IFKVENKNSILRASYDYFQNIYRVYFYSESEKIINIKTYSANSFKLFDNIFIKDEISS
FVEFGKGLLYFNSNNDLKYLGLAQ"
gene complement(316615..317373)
/locus_tag="BbuZS7_0315"
/db_xref="GeneID:7106231"
CDS complement(316615..317373)
/locus_tag="BbuZS7_0315"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374832.1"
/db_xref="GI:218249808"
/db_xref="GeneID:7106231"
/translation="MDLIDNENYKKIVYINNLVLRTLNDIAAIKETGEFTSNAKLSFN
LIDFNLNVLSYISSLNYFYTRPRLKVNYSIKKILSGLISDFSLVISPVLSITPRELIE
MPQALNLNPEERFLIIKKLGYLIDLAKIFSKKDSKTLVFLEDMYLKFIVFSKNIIDFR
DFSKNLKLESPYYKFQFEHLIKVLELLEEGAFILRGKYEISGSHEFGLHSLGYLEAGR
ALATIASQKEAAEKFSRFHGVWSSKFSSDLIKVK"
gene complement(317645..318484)
/locus_tag="BbuZS7_0316"
/db_xref="GeneID:7106187"
CDS complement(317645..318484)
/locus_tag="BbuZS7_0316"
/note="identified by match to protein family HMM PF01513"
/codon_start=1
/transl_table=11
/product="inorganic polyphosphate/ATP-NAD kinase
(Poly(P)/ATP NAD kinase)"
/protein_id="YP_002374833.1"
/db_xref="GI:218249708"
/db_xref="GeneID:7106187"
/translation="MKNKVLLCINTLKSGASILGNDVKVYLETKYFVEVVLIDVGRPL
FSFPKENFLFLITLGGDGTVLLAVNLLLENENIDIPIISINMGNVGFLADIKIEDFKK
VIDRFFNNSLVINKKFLLHVTVSQHGKDLISKYALNDIIIRSSVLNKMIYVDLMVNSE
SFLSYKSDGIIVSTPTGSTGYSFSAGGPILEADLEGFLLTPISPHSVYNRSFVFSKLS
KLSISFSKEYFIAAASIFLDGINFGSFGVDVVFEFKISSQSLNFVSFCTDTFVKRLKN
KLL"
misc_feature complement(317690..318475)
/locus_tag="BbuZS7_0316"
/note="ATP-NAD kinase; Region: NAD_kinase; pfam01513"
/db_xref="CDD:144927"
gene complement(318474..319004)
/locus_tag="BbuZS7_0317"
/db_xref="GeneID:7106881"
CDS complement(318474..319004)
/locus_tag="BbuZS7_0317"
/note="identified by match to protein family HMM PF01584"
/codon_start=1
/transl_table=11
/product="chemnotaxis protein CheW"
/protein_id="YP_002374834.1"
/db_xref="GI:218249723"
/db_xref="GeneID:7106881"
/translation="MFRKESSKDSRSQLQVAGFKIGKESYGVSIEHIREIIKVPSEGV
YAIPNVPEYIIGIYNLRGSIIPLINLNIKFGVPSISVTEEDMLLTGYLIVKIKNKLLG
IFVDRVLKVISFDDSRVQEPPATLQTLDRKYISGVVKLDEADNLESEYLVLIDIAKIF
DKCEFDDIPYKDQYEE"
misc_feature complement(318513..318968)
/locus_tag="BbuZS7_0317"
/note="CheW, a small regulator protein, unique to the
chemotaxis signalling in prokaryotes and archea. CheW
interacts with the histidine kinase CheA, most likely with
the related regulatory domain of CheA. CheW is proposed to
form signalling arrays together...; Region: CheW; cd00732"
/db_xref="CDD:29682"
misc_feature complement(order(318513..318536,318711..318713,
318717..318719,318813..318830))
/locus_tag="BbuZS7_0317"
/note="putative CheA interaction surface; other site"
/db_xref="CDD:29682"
gene complement(319048..319626)
/gene="rrmJ"
/locus_tag="BbuZS7_0318"
/db_xref="GeneID:7106896"
CDS complement(319048..319626)
/gene="rrmJ"
/locus_tag="BbuZS7_0318"
/EC_number="2.1.1.-"
/note="identified by match to protein family HMM PF01728"
/codon_start=1
/transl_table=11
/product="ribosomal RNA large subunit methyltransferase J"
/protein_id="YP_002374835.1"
/db_xref="GI:218249912"
/db_xref="GeneID:7106896"
/translation="MYRLDDEYSKKAKREGYLARSVYKLIEINEKFSLFSSGNVLDIG
ASPGSFSQYAYKKLKRGILVSVDINDIGLRYDDNFYFIKGDIFLDDTVFKINTFKPYS
LVISDVAPKTTGNRLVDTSNSFNLSMRIIDLSLEVLLKKGNLLVKVFQGGDEMQIFKK
FEKYFKFVKKIRPKAVRKNSFEIYFLGKSFGK"
misc_feature complement(319051..319626)
/gene="rrmJ"
/locus_tag="BbuZS7_0318"
/note="23S rRNA methylase [Translation, ribosomal
structure and biogenesis]; Region: FtsJ; COG0293"
/db_xref="CDD:30641"
misc_feature complement(319057..319578)
/gene="rrmJ"
/locus_tag="BbuZS7_0318"
/note="FtsJ-like methyltransferase; Region: FtsJ;
pfam01728"
/db_xref="CDD:201939"
gene 319677..320720
/locus_tag="BbuZS7_0319"
/db_xref="GeneID:7106372"
CDS 319677..320720
/locus_tag="BbuZS7_0319"
/note="identified by match to protein family HMM PF00348"
/codon_start=1
/transl_table=11
/product="octaprenyl-diphosphate synthase"
/protein_id="YP_002374836.1"
/db_xref="GI:218249896"
/db_xref="GeneID:7106372"
/translation="MQNKLFLKNIEKNINKIFSTTNFLNLFKDNDLKFTFKIKKKTLD
YIKAPAIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDD
IEDNSLKRRGASAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTT
LSNLHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKI
YSTFLKLGVYFQIIDDIKNIKNKINGKEFGDDLLEGKKSLPIIYFLQEKKFEPKIISK
FNQIKNTKTTKARKEIFKLTEMINSSKSIKNSTIVALKYLNEFKNELNLYPLTNRYKN
LLIDTIEQIKEGI"
misc_feature 319812..320711
/locus_tag="BbuZS7_0319"
/note="Geranylgeranyl pyrophosphate synthase [Coenzyme
metabolism]; Region: IspA; COG0142"
/db_xref="CDD:30491"
misc_feature 319812..320477
/locus_tag="BbuZS7_0319"
/note="Trans-Isoprenyl Diphosphate Synthases,
head-to-tail; Region: Trans_IPPS_HT; cd00685"
/db_xref="CDD:173833"
misc_feature order(319953..319955,319962..319970,319974..319982,
319986..319991,320004..320009,320178..320180,
320187..320189,320253..320258,320265..320267,
320367..320372,320379..320381,320409..320411,
320424..320426,320439..320441)
/locus_tag="BbuZS7_0319"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:173833"
misc_feature 319962..319991
/locus_tag="BbuZS7_0319"
/note="chain length determination region; other site"
/db_xref="CDD:173833"
misc_feature order(319977..319982,319989..319991,320004..320009,
320187..320189,320253..320255,320367..320372,
320379..320381,320409..320411,320424..320426,
320439..320441)
/locus_tag="BbuZS7_0319"
/note="substrate-Mg2+ binding site; other site"
/db_xref="CDD:173833"
misc_feature order(319977..319982,319989..319991,320004..320009,
320253..320255,320367..320372)
/locus_tag="BbuZS7_0319"
/note="catalytic residues [active]"
/db_xref="CDD:173833"
misc_feature order(319977..319982,319989..319991,320004..320009,
320187..320189,320253..320255)
/locus_tag="BbuZS7_0319"
/note="aspartate-rich region 1; other site"
/db_xref="CDD:173833"
misc_feature order(319995..320039,320388..320393,320409..320426,
320433..320447)
/locus_tag="BbuZS7_0319"
/note="active site lid residues [active]"
/db_xref="CDD:173833"
misc_feature order(320367..320372,320379..320381,320409..320411,
320424..320426,320439..320441)
/locus_tag="BbuZS7_0319"
/note="aspartate-rich region 2; other site"
/db_xref="CDD:173833"
gene 320720..321406
/locus_tag="BbuZS7_0320"
/db_xref="GeneID:7106356"
CDS 320720..321406
/locus_tag="BbuZS7_0320"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374837.1"
/db_xref="GI:218249786"
/db_xref="GeneID:7106356"
/translation="MRKITIMILFYGLIINVCPTTTTSILKLNKKANKHTIEKLYQKS
MLLKDSKKYNKAIESLTKIINMDQNQADAHLLLSELEYLNKNWKKAIIKSQDYLKIID
FKDKKNFLDISWAYFLIGEVKNSMDYIIKFFQSGKELFRENIFIAIDALFKKSIYHFT
NNENAAFNAILSSTFQLALNDDTLFIIFLNNLEIIKQIPFYHFNRKKLEELYLQISTL
KTIQNTTCRT"
misc_feature 320831..321112
/locus_tag="BbuZS7_0320"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cl02429"
/db_xref="CDD:207591"
misc_feature order(320831..320836,320840..320845,320852..320857,
320942..320947,320951..320956,320963..320968,
321047..321052,321059..321064,321071..321076)
/locus_tag="BbuZS7_0320"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 320831..321025
/locus_tag="BbuZS7_0320"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature order(320849..320851,320885..320887,320897..320899,
320906..320908,320951..320953,320987..320989,
321008..321010,321017..321019,321056..321058,
321092..321094,321104..321106)
/locus_tag="BbuZS7_0320"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene complement(321408..322214)
/locus_tag="BbuZS7_0321"
/db_xref="GeneID:7106163"
CDS complement(321408..322214)
/locus_tag="BbuZS7_0321"
/note="identified by match to protein family HMM PF02653"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002374838.1"
/db_xref="GI:218249226"
/db_xref="GeneID:7106163"
/translation="MFSIFEQAIVFSYLALGVLYTEKIGFLNVSIEGISYLSIFLTSF
FIYLGYGIFMSTIFTLFISFLFGFFLSFVVKKNYDIFIAGIGINIFCYFFVDYLMKSN
FNFIPGFTLNLSGNFEIFVFIAVFFIFLFITVYVISYSRIRAVFEFISSGSYEDILGE
KISSRFKSFAIFVSIFTASLAGSFIAVSLNAYSYNLGLNNGWLAICILYIAFSNPLLI
FPISFLIVFFEYQFFRTQEYVNSYFSLSFQFYVAIIINILVSLIKRKDRS"
misc_feature complement(321411..322214)
/locus_tag="BbuZS7_0321"
/note="Uncharacterized ABC-type transport system, permease
component [General function prediction only]; Region:
COG1079"
/db_xref="CDD:31277"
gene complement(322215..323147)
/locus_tag="BbuZS7_0322"
/db_xref="GeneID:7106767"
CDS complement(322215..323147)
/locus_tag="BbuZS7_0322"
/note="identified by match to protein family HMM PF02653"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374839.1"
/db_xref="GI:218249546"
/db_xref="GeneID:7106767"
/translation="MNFFRNSFMALIFSFSILSISYFFGDFFQFSYIKMISWRFILFL
IMATGIATCAKSNSLNLGNEGQIYFGAFLVYIFSSFFGLTYFNFVFLILLSSFFVGLL
GLIPFFITFFFGLNKALTGLLISYGNQRLVDGFILNMLKTGSFSNQTKRINSLFALDS
SLIYLFLFGVSVWFFYVFIHKKTIYGLQLEILSNKKKIDIFFNINEFKYKFFAVFGSA
FLNGLAGSMFVVFFRPYLVLGLTSGLGWSSLIVAVISGFNYVYVLFFSLLFSILIEFN
NFLNINYDFKYEFIGLCQSIAIFISLFLIKARKK"
misc_feature complement(322242..323030)
/locus_tag="BbuZS7_0322"
/note="Transmembrane subunit (TM) of Treponema pallidum
(Tp) RbsC-1, RbsC-2 and related proteins. This is a
functionally uncharacterized subgroup of TMs which belong
to a larger group of TMs of Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette; Region:
TM_PBP1_transp_TpRbsC_like; cd06580"
/db_xref="CDD:119322"
misc_feature complement(322503..322559)
/locus_tag="BbuZS7_0322"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119322"
gene complement(323144..324604)
/locus_tag="BbuZS7_0323"
/db_xref="GeneID:7106796"
CDS complement(323144..324604)
/locus_tag="BbuZS7_0323"
/note="identified by match to protein family HMM PF00005"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002374840.1"
/db_xref="GI:218249463"
/db_xref="GeneID:7106796"
/translation="MVEFKNIVKYFPDIDKPILDSINLKIGEVKIFTVVGKNGEGKST
LAKIIAGLIEFDEGEILVNGIKQKNWNVDKAKNNGIYLVSQVPNLKMNLRVWEYLSIY
WFGYEFFMPMNKSKTYKYYRWLMQFYKISFDLDKKIKDLNIKEIYFLLIIAALKENAK
IIIFDESAAYFSQKEAQAFIKLLVLLKKSGVASLFITHSEITDAIKFSDEFIILKDGK
CFRTVNKESILSKLESSSDKVFVANINCNKFEKDPIKFNLFFEDFWKYDVSFSLNKRG
VLGIIGEEAVIKTWEKLFLGELIFVGCIKIDGIRYERINIFECKAGFLPLGIGNLFPD
NSSILDNFLAKFMNFENKIFIRQSYINQIKDFFKKKMEFYSEEKIYRILYSKSLAFSG
GTLKKFALYREMYIAKSFLICFSPLSNLDHKAYNEMSVAIRNYSKEKPVLLITSNLDE
LLLLSDNILAMKMGEVLLNVSREKISKEKLKELLFL"
misc_feature complement(323189..324604)
/locus_tag="BbuZS7_0323"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:31325"
misc_feature complement(323951..324598)
/locus_tag="BbuZS7_0323"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(324476..324499)
/locus_tag="BbuZS7_0323"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(324011..324013,324107..324112,
324350..324352,324473..324481,324485..324490))
/locus_tag="BbuZS7_0323"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(324350..324361)
/locus_tag="BbuZS7_0323"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(324155..324184)
/locus_tag="BbuZS7_0323"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(324107..324124)
/locus_tag="BbuZS7_0323"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(324089..324100)
/locus_tag="BbuZS7_0323"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(324002..324007,324011..324025))
/locus_tag="BbuZS7_0323"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
misc_feature complement(<323303..323806)
/locus_tag="BbuZS7_0323"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(323738..323761)
/locus_tag="BbuZS7_0323"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(323360..323365,323603..323605,
323729..323731,323738..323743,323747..323752))
/locus_tag="BbuZS7_0323"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(order(323603..323608,323612..323617))
/locus_tag="BbuZS7_0323"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(323408..323437)
/locus_tag="BbuZS7_0323"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(323360..323377)
/locus_tag="BbuZS7_0323"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(323342..323353)
/locus_tag="BbuZS7_0323"
/note="D-loop; other site"
/db_xref="CDD:72971"
gene complement(324604..325656)
/locus_tag="BbuZS7_0324"
/db_xref="GeneID:7106539"
CDS complement(324604..325656)
/locus_tag="BbuZS7_0324"
/note="identified by match to protein family HMM PF02608"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374841.1"
/db_xref="GI:218249755"
/db_xref="GeneID:7106539"
/translation="MSKKVFFKGFWILFTIFHLYLFVYLIFFKKRKVDISNKTNIALF
IPGVISGSPSYKEMYDSLFEFKKNHENLEIKVLEAGFNQSEWIEMLEKLLTSKKYDFL
ITTNNAMQDIVDSVSSNYPYTKFLIFDSLVKNTNKQVYSVSYNVAEEAYILGYYVGLF
LKEFIKSGFGNAALIAGQNYPVMNDYIYRYFKKGILDTGMRSEVYYRVLGNWHDSNLA
KLLSDSLIKDSGALVILPIVGPAVEGVLSSVRENNISAVLFDSEDYLDNKENIIGSGI
TNQKYYVSHILDKALKSEINYGNSDIFGIKHKGVLFNVSNVFYLERTSQKLKEDLLKK
IEEVSANGIKINLEQN"
misc_feature complement(324607..325653)
/locus_tag="BbuZS7_0324"
/note="Uncharacterized ABC-type transport system,
periplasmic component/surface lipoprotein [General
function prediction only]; Region: Med; COG1744"
/db_xref="CDD:31930"
misc_feature complement(324682..325545)
/locus_tag="BbuZS7_0324"
/note="Basic membrane protein; Region: Bmp; pfam02608"
/db_xref="CDD:202307"
gene complement(326067..327125)
/locus_tag="BbuZS7_0325"
/db_xref="GeneID:7106928"
CDS complement(326067..327125)
/locus_tag="BbuZS7_0325"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374842.1"
/db_xref="GI:218249879"
/db_xref="GeneID:7106928"
/translation="MLSSRTLFSQVAVVKEIEGRVSVVRNTFPVKLDLDDEIFEYDFI
EVGENSKLKINLYEINGISVDLIFYSNTNSFVFYSSLKDLQDAKIYLFRGSVDAIIHS
IVKGSSFSVIIDNNLFKAENTSKFYVNSDYFNNCFINVYKGSIRHINKTEYLIFPNTS
LLLFNGNSFLHKVNEGTLKGVNQNFIRMAKDNFMSLNKRFLYFFVLKYIEDSFRFNFM
YNYLMKDFKFNSIYSKWSLEDKNYKFGNRVDMIKNVNYLKGRIGVLFNNFVDLANRFY
FVDDVLKYFSTFFDNSTTVNGPISKFLKDYKANKNLLKNKFFKTIHSLKMYLRRSNDD
ITSNLNVNELYLLRPREF"
gene 327400..328533
/locus_tag="BbuZS7_0326"
/db_xref="GeneID:7106338"
CDS 327400..328533
/locus_tag="BbuZS7_0326"
/note="identified by match to protein family HMM PF01476"
/codon_start=1
/transl_table=11
/product="LysM domain protein"
/protein_id="YP_002374843.1"
/db_xref="GI:218249796"
/db_xref="GeneID:7106338"
/translation="MNIKNKLISLLIVVAISFIACKTPPESRESKNAKIAQPDNKNFQ
LRDIKDIKNELIRERGHLFYSKEFNEAERLEEAMKQSFSKKKAIEGNEIALKVLERYK
TIIRETREKKEKTNYLKENIEKYLNDAEANEAYIWIPLEIDEVNNLYFEATRKYKNYD
LDNALDMYSKAFNRAQQAAKNAKEAKALKETDERMYKQLKALEAASNLPIYSNNKLIK
PSPWNGRAFIKERNSHLNLLNTNKDTYLLGEAEISIPIVLAYEEKVEIAKNSKPQEQF
KTLELIERSRTLWEKGVEAKNVKNFRLANELFLESARYLEAYQSNASSELYVIKIGNT
LWGISKKLYNDPYLWPKIWFANRQKIQNPDLIHSNWKIIIPAK"
misc_feature <328342..328530
/locus_tag="BbuZS7_0326"
/note="Uncharacterized protein containing LysM domain
[Function unknown]; Region: XkdP; COG1652"
/db_xref="CDD:31838"
gene complement(328497..328613)
/locus_tag="BbuZS7_0327"
/db_xref="GeneID:7106173"
CDS complement(328497..328613)
/locus_tag="BbuZS7_0327"
/note="identified by glimmer"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374844.1"
/db_xref="GI:218249812"
/db_xref="GeneID:7106173"
/translation="MFLLFNFIRYKIRKQGFLKPCFMIVFAYLAGIIIFQLE"
gene 328630..329007
/locus_tag="BbuZS7_0328"
/db_xref="GeneID:7106191"
CDS 328630..329007
/locus_tag="BbuZS7_0328"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374845.1"
/db_xref="GI:218249311"
/db_xref="GeneID:7106191"
/translation="MKKLILLNLIFISCYTINLEKLTKETPYGVYLREAQKAVNVNDY
NSALKAYEKMIQNFAHNSNIVATGKYEIAFIYYITNKTEKAKKIFEELIGNNMEMPKW
IKPLAKKILNKIENNNLRNKNFY"
misc_feature 328723..328929
/locus_tag="BbuZS7_0328"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:222123"
gene complement(329001..330110)
/locus_tag="BbuZS7_0329"
/db_xref="GeneID:7106521"
CDS complement(329001..330110)
/locus_tag="BbuZS7_0329"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374846.1"
/db_xref="GI:218249583"
/db_xref="GeneID:7106521"
/translation="MKKIFLFLFVSFYLFGFEDSSLKIGIDDVYVEAHEEGFHLFIRK
KPAIKSVILTESFEIPDKKKDVATYSFRTLSYNKVNGDEIRILNGRVIKNKELLSLTS
STPVPNKKFGEAFHILIPKKLKYGFPNFSTRSGDIDLEVLKSKKEPFWFSIRSFEKKY
NDYLGRYQDNAYELLFKDDQNQGKIEFNELKDTFTKFSDEVVIANNGIDIVDKINKIL
KNSEDSVYDLDLVLVVDVTDSMKSNIEILKEHLFSIIEPQLQKFKSYRIGLVFYKDYL
EDFLTKAFDFNTIPYLNNILKYVNVGGGGDYPEAVFEGIDAAVTQFDWRAERRFIIVI
GDAPPHEYPRGSIVYKDVINSAKEKDITIYGIIFQ"
misc_feature complement(329013..329390)
/locus_tag="BbuZS7_0329"
/note="Von Willebrand factor type A (vWA) domain was
originally found in the blood coagulation protein von
Willebrand factor (vWF). Typically, the vWA domain is made
up of approximately 200 amino acid residues folded into a
classic a/b para-rossmann type of...; Region: vWFA;
cd00198"
/db_xref="CDD:29222"
misc_feature complement(order(329103..329105,329193..329195))
/locus_tag="BbuZS7_0329"
/note="metal ion-dependent adhesion site (MIDAS); other
site"
/db_xref="CDD:29222"
gene complement(330161..332956)
/locus_tag="BbuZS7_0330"
/db_xref="GeneID:7106834"
CDS complement(330161..332956)
/locus_tag="BbuZS7_0330"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374847.1"
/db_xref="GI:218249953"
/db_xref="GeneID:7106834"
/translation="MPDVDKIIQFKREILDNLSNERLSKESFGLSMDVKLPEPGESIV
PWIVEDLALDETDDELDLNFMLDALENEDKLSYSDIFNDNLPLSGSNLRVDVDSELST
LNNDFDVSSSDSFENNIDKVLDDNSIDLEIASKLDFDNLINSPELSSEELINSQGNNN
FFEANNNSSVLGDSNFLQSNEFNIDDAVNGKNQTDEQSEMFVGDSLNLSADEDDFENV
IDDFKFLEYDQNANFKRFEFKVNYPLFLKHLNSYPRNLRIAIAEALTKENVSRFKLEA
LIDLVEKNKKRLKFIAKFVGDIVGRSIKLPVIYFKAEEFSKLQQKLSYRVSRALLPLI
KIASFFVVLVLVSLYLIVDVIFFYVASESKYKEGIESIYANKRDLAKSIFRDAYYIRP
DDKWFINYAKAFEDVRDFDSAEEKYEELFTIEPFSKNSTNRRRKKFNKEGYISYASMK
IGLGEHSEANSILDEVISYDLYDYDALVLKGDNYFKWAKTNSNYYKDSINSYTVVLSK
YGQKKEILFKLFNAYIEANLDTESDNVNNFIKSNEILDIDEVVYTKYAKKLVDKYISF
VTYNQRANNLAINLNYLNGQTNLLNKEFSDFKRNDGRTIFKLDNNVNMNSEIEYILRK
ILNKNPNYDKALFESGRYSYYIGDFKKAEVYLLKALNSFRHKNSIEDAGDKILAYKIL
ADIYEKTRDSLRASNIIGLALSDYSFYKKHNLIKGSKEISSIYEKQGDILRSLNDFKS
AISSYKLAINEGVDYPDVYYKVGLLSYRENNYDDALKYLFKVESMAGFSSSNEVLNTI
ALTLYKIGDFLASRSYYLRVMQNLELEKANVLNFNPKENDYHKTLLLKEIETYNNLGV
VEVMASFSSIRDTKLFNSGVSNLSESAKIFDILNRDEDMVKSVKKDLASLNLRNIFKN
SFSKSNVLFYENLSEKL"
misc_feature complement(330599..330799)
/locus_tag="BbuZS7_0330"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature complement(330497..330787)
/locus_tag="BbuZS7_0330"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(330542..330547,330554..330559,
330566..330571,330653..330658,330665..330670,
330674..330679,330764..330769,330776..330781,
330785..330787))
/locus_tag="BbuZS7_0330"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(330503..330505,330512..330514,
330524..330526,330560..330562,330611..330613,
330620..330622,330632..330634,330668..330670,
330713..330715,330722..330724,330734..330736,
330770..330772))
/locus_tag="BbuZS7_0330"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene complement(332977..333873)
/locus_tag="BbuZS7_0331"
/db_xref="GeneID:7106259"
CDS complement(332977..333873)
/locus_tag="BbuZS7_0331"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate O-acyltransferase"
/protein_id="YP_002374848.1"
/db_xref="GI:218249515"
/db_xref="GeneID:7106259"
/translation="MFVQNESFDKYFKDMESDFVSQFKSVENVNYLDKSYRNADSKSR
RLADRMIERLLESGSTIVGIQNILELYQKTKSGKSSIILMEHYSNFDFPCFQFLLYKM
GYHDIADHIIPIAGVKLFRDNLFVKTLSLGYNAILVYPPHAFVGVGLEHARQRRVFNT
NSMKYIYEKKNSGYIILIFPTATRYRKGRPETKKIILEIGNYFKIFDYYLMIGVNGNV
LEVSEDGDMSHDVFKRDSLIYNADKVISIAEYRDEILNTLKDSQTEITKEVLGLKIAE
DLENRFNVLHAKGHEFYKKSFL"
misc_feature complement(<333304..333633)
/locus_tag="BbuZS7_0331"
/note="Phosphate acyltransferases; Region: PlsC;
smart00563"
/db_xref="CDD:197792"
misc_feature complement(order(333322..333330,333520..333531,
333601..333603,333607..333609,333616..333618))
/locus_tag="BbuZS7_0331"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153244"
gene 334295..335866
/locus_tag="BbuZS7_0332"
/db_xref="GeneID:7106592"
CDS 334295..335866
/locus_tag="BbuZS7_0332"
/note="identified by match to protein family HMM PF00496"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter substrate-binding
protein"
/protein_id="YP_002374849.1"
/db_xref="GI:218249446"
/db_xref="GeneID:7106592"
/translation="MKYIKIALMLIIFSLIACISNAKKEKIVFRVSNLSEPSSLDPQL
STDLYGSNIITNLFLGLAVKDSQTGKYKPGLAKSWNISEDGIIYTFNLREDIVWSDGV
AITAEEIKKSYLRILNKKTAAMYANLIKSTIKNAQEYFDETVPESELGIKAIDSKTLE
ITLTSPKPYFPDMLTHSAYIPVPMHIVEKYGENWTNPENIVVSGAYKLKERSINDKIV
IEKNEKYYNVKNVEIDEVIFYPIDGSVAYNMYINGELDFLQAAEKNNLEEIKIRDDYY
SGLKNAMAYMVFNTTLKPLDNLKVRQALSLAIDRESLSKIVLKGSSEPTRNLTPKFDN
YSYGKQLTLFDPENAKKLLAEAGYPDGKGFPTLKYKISGGTQTVPEFLQEQFKKILNI
NIEIENEEWTTFLGSRRTGNYQMSSVGWIGDYFDPLTFLDSLFTTENHFFGAYQYSNK
EYDALIKKSHLEFDPIKRQDILREAEAIIVEKDFPVAPLYIPKSHYLFRNDKWTGWVP
NISESYLYEDIKTKK"
misc_feature 334313..335863
/locus_tag="BbuZS7_0332"
/note="ABC-type oligopeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
OppA; COG4166"
/db_xref="CDD:33908"
misc_feature 334376..335848
/locus_tag="BbuZS7_0332"
/note="The substrate-binding component of an ABC-type
oligopetide import system contains the type 2 periplasmic
binding fold; Region: PBP2_OppA; cd08504"
/db_xref="CDD:173869"
misc_feature order(334445..334447,335069..335071,335132..335134,
335495..335497,335543..335545,335549..335563,
335768..335770)
/locus_tag="BbuZS7_0332"
/note="peptide binding site [polypeptide binding]; other
site"
/db_xref="CDD:173869"
gene 335965..337551
/locus_tag="BbuZS7_0333"
/db_xref="GeneID:7106440"
CDS 335965..337551
/locus_tag="BbuZS7_0333"
/note="identified by match to protein family HMM PF00496"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter substrate-binding
protein"
/protein_id="YP_002374850.1"
/db_xref="GI:218249558"
/db_xref="GeneID:7106440"
/translation="MKLQKLLFLIIFFLTFLCCNKEEKKEGVSFKISLGAEPSSLDPQ
LADDNVGSKMIDTMFKGLITGNPNTGGNKPGLAKGWDISSDGTVYTFNLREKITWSDG
VAITAEGIRKSYLRILNKETGSKYVEMVKSVIKNGQKYFDGQVTDSELGIRAIDEKTL
EITLESPKPYFIDMLVHQSFIPVPVHVTEKYGQNWTSPENMVTSGPFKLKERIPNEKY
VFEKNNKYYDSNEVELEEITFYTTNDSSTAYKMYENEELDAIFGSIPPDLIKNLKLRS
DYYSSAVNAIYFYAFNTHIKPLDNVKIRKALTLAIDRETLTYKVLDNGTTPTRRATPN
FSSYSYAKSLELFNPEIAKTLLAEAGYPNGNGFPILKLKYNTNEANKKICEFIQNQWK
KNLNIDVELENEEWTTYLNTKANGNYEIARAGWIGDYADPLTFLSIFTQGYTQFSSHN
YSNPEYNELIKKSDLELDPIKRQDILRQAEEIIIEKDFPIAPIYIYGNSYLFRNDKWT
GWNTNILERFDLSQLKLKNK"
misc_feature 336037..337545
/locus_tag="BbuZS7_0333"
/note="ABC-type oligopeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
OppA; COG4166"
/db_xref="CDD:33908"
misc_feature 336049..337527
/locus_tag="BbuZS7_0333"
/note="The substrate-binding component of an ABC-type
oligopetide import system contains the type 2 periplasmic
binding fold; Region: PBP2_OppA; cd08504"
/db_xref="CDD:173869"
misc_feature order(336118..336120,336745..336747,336811..336813,
337180..337182,337228..337230,337234..337248,
337450..337452)
/locus_tag="BbuZS7_0333"
/note="peptide binding site [polypeptide binding]; other
site"
/db_xref="CDD:173869"
gene 337694..339319
/locus_tag="BbuZS7_0334"
/db_xref="GeneID:7106808"
CDS 337694..339319
/locus_tag="BbuZS7_0334"
/note="identified by match to protein family HMM PF00496"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter substrate-binding
protein"
/protein_id="YP_002374851.1"
/db_xref="GI:218249638"
/db_xref="GeneID:7106808"
/translation="MSFNKTKKIGKKIKIVTLLMLAVSLIACNNNSEKEKLAFKVYIG
GAPSSLDPHLVDETIGARILEQIFSGLLTLNTKTGKLKPGLAKNWEASKDKKTYQFYL
RDNLFWSDGVEITAEGIRKSFLRILNKETGSTNVDMLKSIIKNGQEYFDGKVSDSELG
IKAIDSKTLEITLTAPKPYFLELLLHYAFMPVPIHVIEKYKGNWTSPENMVTSGPFKL
KKRLPNEKIIFEKNERYYNAKEVELDELVYITSDNDLTVYNMYKNNEIDAIFNSIPPD
IVNEIKLQKDYYQHKSNAIYLYSFNTKIKPLDDARVREALTLAIDRETLTYKVLNDGT
VPTREITPDLENYNYGKKLALFDPEKSKKLLADAGYPNGKGFPMLTLKYNTNETHKKI
AAFIQNQWKKILNINLMLTNENWPVLTNSRNTGNFEIIRVGRIGEYLDPHTYFTIFTR
ENSQLASYGYSNLEFDKLIRESDLEKDPIKRKQLLRKAESIIIEKDFPAAPIYIYSGH
YLFRNDKWTGWSPNVSEVYYLSELKPIKNAKHN"
misc_feature 337739..339301
/locus_tag="BbuZS7_0334"
/note="ABC-type oligopeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
OppA; COG4166"
/db_xref="CDD:33908"
misc_feature 337808..339289
/locus_tag="BbuZS7_0334"
/note="The substrate-binding component of an ABC-type
oligopetide import system contains the type 2 periplasmic
binding fold; Region: PBP2_OppA; cd08504"
/db_xref="CDD:173869"
misc_feature order(337874..337876,338501..338503,338567..338569,
338936..338938,338984..338986,338990..339004,
339206..339208)
/locus_tag="BbuZS7_0334"
/note="peptide binding site [polypeptide binding]; other
site"
/db_xref="CDD:173869"
gene complement(339398..339553)
/locus_tag="BbuZS7_0335"
/db_xref="GeneID:7106097"
CDS complement(339398..339553)
/locus_tag="BbuZS7_0335"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374852.1"
/db_xref="GI:218249770"
/db_xref="GeneID:7106097"
/translation="MNNFIFNKMYFLFLIFYLKFYSLDLRRIFLCKILSKIIIESYTL
FMYFCFK"
gene 339677..340597
/locus_tag="BbuZS7_0336"
/db_xref="GeneID:7106943"
CDS 339677..340597
/locus_tag="BbuZS7_0336"
/note="identified by match to protein family HMM PF00528"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002374853.1"
/db_xref="GI:218249905"
/db_xref="GeneID:7106943"
/translation="MLKFTLKKILGIIPTLLVIIFLCFFVMRMAPGSPFDSEKPIDPQ
VKARLMEKYHLDKPFYIQAFYYITNALRGDLGPSLKKKDLTVSQYIKLGFPKSLTLGV
ISLIISLSIGIPIGILAAIYKNTYVDYIITSIAILGISIPLFVIGPILQYFFAIKWGL
LYTSGWITERGGFSNLILPIITLSMPNVAIFARIIRGSMLEIIQSDFIRTARAKGLSF
KKIVIKHMLRGAMLPVVSYIGPAFAAIISGSVVIEKIFRIAGMGMFITESALNRDYPV
LMGGLLVYSIILLISILISDIIYKILDPRV"
misc_feature 339677..340513
/locus_tag="BbuZS7_0336"
/note="oligopeptide transporter permease; Reviewed;
Region: oppB; PRK09471"
/db_xref="CDD:181886"
misc_feature <340100..>340444
/locus_tag="BbuZS7_0336"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(340100..340111,340118..340123,340127..340129,
340232..340237,340241..340243,340247..340249,
340256..340261,340265..340267,340277..340282,
340289..340291,340340..340342,340382..340387,
340394..340396,340415..340426,340433..340438)
/locus_tag="BbuZS7_0336"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(340100..340129,340415..340432)
/locus_tag="BbuZS7_0336"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(340127..340129,340217..340219,340433..340435)
/locus_tag="BbuZS7_0336"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(340292..340330,340346..340351,340361..340363)
/locus_tag="BbuZS7_0336"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 340610..341659
/locus_tag="BbuZS7_0337"
/db_xref="GeneID:7106365"
CDS 340610..341659
/locus_tag="BbuZS7_0337"
/note="identified by match to protein family HMM PF00528"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter permease"
/protein_id="YP_002374854.1"
/db_xref="GI:218249781"
/db_xref="GeneID:7106365"
/translation="MNSLEKQNEENNSKLERRAWSRFKENKLAFGSLFVIGFYISIAI
LQPILPIYKYHTQIVEHSDLPPSFQAAGELWYNKEKKFIEKLAKKEKREINEEELKKL
EDIKRKIENEVQIIDKKEVKIHKRVYLLGTDNLGRDLLARLIQGSQISLSVGFIGAFL
SMIIGTILGSIAGFFGGLPDKIITKTIEILYALPYLLIVIILMAIMERSIIGLFIALA
FVSWLTVARVVRGQVQSLSSSEFIQAAKTLGATNQRIILKHLIPNSIGMIVIFTTIRV
PSFIMAEAFLSFLGLGISAPMTSWGELVQNGIATFVEYPWKVFIPAIVMTIFLLFMNF
LGDGLRDAFDPKDSI"
misc_feature 340646..341653
/locus_tag="BbuZS7_0337"
/note="ABC-type uncharacterized transport system, permease
component [General function prediction only]; Region:
COG4239"
/db_xref="CDD:33962"
misc_feature 340658..340810
/locus_tag="BbuZS7_0337"
/note="N-terminal TM domain of oligopeptide transport
permease C; Region: OppC_N; pfam12911"
/db_xref="CDD:205142"
misc_feature 341054..341596
/locus_tag="BbuZS7_0337"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(341096..341101,341108..341113,341126..341128,
341156..341167,341171..341200,341207..341212,
341216..341218,341267..341272,341276..341278,
341282..341284,341291..341296,341300..341302,
341312..341317,341324..341326,341375..341377,
341417..341422,341429..341431,341450..341461,
341468..341473,341513..341518,341546..341551,
341558..341563,341567..341572,341579..341584,
341591..341596)
/locus_tag="BbuZS7_0337"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(341174..341218,341450..341467)
/locus_tag="BbuZS7_0337"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(341216..341218,341252..341254,341468..341470,
341507..341509,341516..341518,341546..341548)
/locus_tag="BbuZS7_0337"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(341327..341365,341381..341386,341396..341398)
/locus_tag="BbuZS7_0337"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 341671..342543
/locus_tag="BbuZS7_0338"
/db_xref="GeneID:7106158"
CDS 341671..342543
/locus_tag="BbuZS7_0338"
/note="identified by match to protein family HMM PF00005;
match to protein family HMM PF08352"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter ATP-binding protein"
/protein_id="YP_002374855.1"
/db_xref="GI:218249931"
/db_xref="GeneID:7106158"
/translation="MEKENILEIKNLTIEFRLKHTTIHPVSNVNLSVKRGEIRAIVGE
SGSGKSVTSMAILKLLPELTTVYKSGEILFENQDLLKLSEKELLKIRGNKISMIFQDP
MTSLNPFLRISTQLEETIILHQGLGKKEAKEKAIEMLKTVGVVNAEERIKHFPHQFSG
GMRQRVMIAMALSCHPSLLIADEPTTALDVTIQEQILLLIKNLSKKFNTSTIFITHDL
AVVAEICDTVSVMYQGKIVEEGTVEEIFNNPKHPYTIGLLKSILTLEHDPNKKLYSTK
ENPMKITKTSTEEF"
misc_feature 341686..342390
/locus_tag="BbuZS7_0338"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature 341746..342444
/locus_tag="BbuZS7_0338"
/note="nickel import ATP-binding protein NikD; Region:
nickel_nikD; TIGR02770"
/db_xref="CDD:131817"
misc_feature 341797..341820
/locus_tag="BbuZS7_0338"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature order(341806..341811,341815..341823,341968..341970,
342214..342219,342316..342318)
/locus_tag="BbuZS7_0338"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature 341959..341970
/locus_tag="BbuZS7_0338"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature 342142..342171
/locus_tag="BbuZS7_0338"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature 342202..342219
/locus_tag="BbuZS7_0338"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature 342226..342237
/locus_tag="BbuZS7_0338"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature 342304..342324
/locus_tag="BbuZS7_0338"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature 342379..>342507
/locus_tag="BbuZS7_0338"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; pfam08352"
/db_xref="CDD:203916"
gene 342544..343515
/locus_tag="BbuZS7_0339"
/note="OppF; this gene contains a premature stop which may
be the result of sequencing error; identified by match to
protein family HMM PF00005; match to protein family HMM
PF08352"
/pseudo
/db_xref="GeneID:7106235"
gene complement(343528..344259)
/locus_tag="BbuZS7_0340"
/db_xref="GeneID:7106074"
CDS complement(343528..344259)
/locus_tag="BbuZS7_0340"
/codon_start=1
/transl_table=11
/product="P26"
/protein_id="YP_002374856.1"
/db_xref="GI:218249683"
/db_xref="GeneID:7106074"
/translation="MVFVALCVNNLFSDDYLIYDFDLSLNEFLEVSTRKDNLEPMVDS
NRILLFYPPKKEIRKIFAAFDFDQYSKKYLFKKNEHGVFFVKVNIPHGTSSIKYRLIV
DGVWTNDEYNKNVVYNEDLIPFSKIEIAKEKSSYISLRNPIQSYDNNEIEIFYIGRPG
QIVTIAGSFNNFNPFLNRLIEKEDNKGIYTIKLKNLPKDRIYYYFIDSGNKVIDKNNV
NRINLYFVEGIDNKIDFEVSYFDHK"
misc_feature complement(343912..>344067)
/locus_tag="BbuZS7_0340"
/note="Early set domain associated with the catalytic
domain of sugar utilizing enzymes at either the N or C
terminus; Region: E_set; cl09101"
/db_xref="CDD:211508"
misc_feature complement(343615..>343773)
/locus_tag="BbuZS7_0340"
/note="Early set domain associated with the catalytic
domain of sugar utilizing enzymes at either the N or C
terminus; Region: E_set; cl09101"
/db_xref="CDD:211508"
gene 344399..345700
/gene="eno"
/locus_tag="BbuZS7_0341"
/db_xref="GeneID:7106143"
CDS 344399..345700
/gene="eno"
/locus_tag="BbuZS7_0341"
/EC_number="4.2.1.11"
/note="enolase; catalyzes the formation of
phosphoenolpyruvate from 2-phospho-D-glycerate in
glycolysis"
/codon_start=1
/transl_table=11
/product="phosphopyruvate hydratase"
/protein_id="YP_002374857.1"
/db_xref="GI:218249639"
/db_xref="GeneID:7106143"
/translation="MGFHIYEIKARQIIDSRGNPTVEADVILEDGTYGRAAVPSGAST
GINEAVELRDGDKSVYMGKGVLKAIENIKNIIAPELEGMSALNQVAIDRKMLELDGTP
TKEKLGANAILAVSMATAKAAAKYLGLRPYQYLGAYKANILPTPMCNIINGGAHSDNS
VDFQEFMIMPIGAKTFSEAIRMAAEVFHTLKGILSGKGYATSVGDEGGFAPNLKSNEE
ACEVIIEAIKKAGYEPGKDIAIALDPATSELYDPKTKKYVLKWSTKEELTSEQMVEYW
AKWVEKYPIISIEDGMAEEDWDGWKKLTDKIGNKIQLVGDDLFVTNTSFLKKGIEMGV
ANSILIKVNQIGTLTETFEAVEMAKKAGYTAIVSHRSGETEDTTIADLVVALGTGQIK
TGSLSRTDRIAKYNQLIRIEEELETTAEYHGKSVFYSIKQK"
misc_feature 344411..345691
/gene="eno"
/locus_tag="BbuZS7_0341"
/note="enolase; Provisional; Region: eno; PRK00077"
/db_xref="CDD:178845"
misc_feature 344417..345640
/gene="eno"
/locus_tag="BbuZS7_0341"
/note="Enolase: Enolases are homodimeric enzymes that
catalyse the reversible dehydration of
2-phospho-D-glycerate to phosphoenolpyruvate as part of
the glycolytic and gluconeogenesis pathways. The reaction
is facilitated by the presence of metal ions; Region:
enolase; cd03313"
/db_xref="CDD:48188"
misc_feature order(344423..344425,344429..344455,344465..344467,
344501..344503,344867..344875,344936..344941,
344948..344953,344960..344965,345002..345007,
345026..345028,345032..345034,345515..345523,
345590..345598,345602..345607,345614..345616,
345623..345628,345635..345637)
/gene="eno"
/locus_tag="BbuZS7_0341"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48188"
misc_feature order(344525..344527,345125..345127,345263..345265,
345344..345346)
/gene="eno"
/locus_tag="BbuZS7_0341"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:48188"
misc_feature order(344864..344866,345014..345016,345419..345421,
345503..345511,345572..345574)
/gene="eno"
/locus_tag="BbuZS7_0341"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:48188"
gene complement(345767..346177)
/gene="rpsI"
/locus_tag="BbuZS7_0342"
/db_xref="GeneID:7106099"
CDS complement(345767..346177)
/gene="rpsI"
/locus_tag="BbuZS7_0342"
/note="forms a direct contact with the tRNA during
translation"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S9"
/protein_id="YP_002374858.1"
/db_xref="GI:218249544"
/db_xref="GeneID:7106099"
/translation="MKKSNFSNVNLSMGTGRRKSSVARVYIREGSGNIKVNNRDFDSY
IQLENLRTMALSPLVLTNTLGKYDLYINVYGGGISGQSGAIRHGISRALFKLDESNKM
ILRSNGFLTRDSRKVERKKFGQKKARKSFQFSKR"
misc_feature complement(345770..346141)
/gene="rpsI"
/locus_tag="BbuZS7_0342"
/note="30S ribosomal protein S9; Reviewed; Region: rpsI;
PRK00132"
/db_xref="CDD:178888"
gene complement(346197..346637)
/gene="rplM"
/locus_tag="BbuZS7_0343"
/db_xref="GeneID:7106794"
CDS complement(346197..346637)
/gene="rplM"
/locus_tag="BbuZS7_0343"
/note="in Escherichia coli this protein is one of the
earliest assembly proteins in the large subunit"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L13"
/protein_id="YP_002374859.1"
/db_xref="GI:218249829"
/db_xref="GeneID:7106794"
/translation="MNKITNNDTIWIKPKTVEKKWYVIDAADRILGKVAVDVVKILRG
KHKAYYTPHQDLGDNVIIINASKVKLTGKKYQQKLYYRHSRYPGGLYSDTFRTLSERK
PCAPLEIAIKGMLPKGPLGRNLFRNLKVFSGSEHTLKAQNPIKL"
misc_feature complement(346236..346577)
/gene="rplM"
/locus_tag="BbuZS7_0343"
/note="Ribosomal protein L13. Protein L13, a large
ribosomal subunit protein, is one of five proteins
required for an early folding intermediate of 23S rRNA in
the assembly of the large subunit. L13 is situated on the
bottom of the large subunit, near the...; Region:
Ribosomal_L13; cd00392"
/db_xref="CDD:88313"
misc_feature complement(order(346248..346253,346260..346262,
346272..346274,346278..346280,346284..346292,
346296..346304,346308..346316,346332..346337,
346419..346421,346425..346427,346509..346511,
346521..346523,346530..346532,346539..346544,
346548..346550))
/gene="rplM"
/locus_tag="BbuZS7_0343"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88313"
misc_feature complement(346332..346334)
/gene="rplM"
/locus_tag="BbuZS7_0343"
/note="L3 interface [polypeptide binding]; other site"
/db_xref="CDD:88313"
gene complement(346687..347496)
/locus_tag="BbuZS7_0344"
/db_xref="GeneID:7106209"
CDS complement(346687..347496)
/locus_tag="BbuZS7_0344"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374860.1"
/db_xref="GI:218249735"
/db_xref="GeneID:7106209"
/translation="MYDLPLIDNLPVIKRARFFYLYDIHGKRYLDLYLNGGRNFLGYR
VQGLNRLFKQTMSRGLISPYPSVFKNQFINLVFTFFKEAGSVYIFKLEKDAKEFLLYL
TGKNKFFMPWEKEEGIYEFRVGFSNIKYPMIFNIPLPDFMSVSIVVMDNLSRKIEFKD
NFDAVTLSLARHTLSKLLFYKKNIDIDFNSFATPLFRIADRYMLPLYDACYHAEIFNE
FLKFGYLISPNFSIPSIVPLKFSKGDLDNFKKLCFALKNKFIDGLDSDPYK"
misc_feature complement(<347365..347466)
/locus_tag="BbuZS7_0344"
/note="Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the...; Region: AAT_I;
cl00321"
/db_xref="CDD:213094"
gene complement(347489..348946)
/gene="gatB"
/locus_tag="BbuZS7_0345"
/db_xref="GeneID:7106908"
CDS complement(347489..348946)
/gene="gatB"
/locus_tag="BbuZS7_0345"
/note="allows the formation of correctly charged
Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
which lack either or both of asparaginyl-tRNA or
glutaminyl-tRNA synthetases; reaction takes place in the
presence of glutamine and ATP through an activated
phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA"
/codon_start=1
/transl_table=11
/product="aspartyl/glutamyl-tRNA amidotransferase subunit
B"
/protein_id="YP_002374861.1"
/db_xref="GI:218249291"
/db_xref="GeneID:7106908"
/translation="MEYKLVIGLEIHVQLGLKTKAFCGCKNEFGGVPNSRVCPICLGL
PGSLPSVNVELINSAILAGHATNSKIRNVVKFDRKHYYYPDLPKGYQISQNDKPICEG
GSLLIETPSGPKKINIIRIHMEEDSGKSLHLLDSENQSYVDFNRSGAPLLEIVSAPDI
NSGDEAVAFLSSLREIFRYLDLSECNMENGSFRCDVNVNLIVKENGVEHKTPIAEIKN
LNSFKSIKAAIEYEELRQQQEWIQFKKTLNSCGKHTRGFDDRSGVTVIQRNKETVSDY
RYFQEPDLPLIEIDDSYIDNIKNLKLIELPFHARIRLKGQYGLSDFDVITLTADKHLL
KYFEEAVINSSDPKKVANWILSEVLSVLNDKGISVLEFNLLPSYITELVEFIVAGKIS
GKMAKRVFSEMMTRGVSASVVISENQLEQVSDKFVIKQIVLEVLDENPKSIELYKKGK
DHAIKFMMGQIMKKSSGKINPILANEILLESLSNV"
misc_feature complement(347501..348946)
/gene="gatB"
/locus_tag="BbuZS7_0345"
/note="aspartyl/glutamyl-tRNA amidotransferase subunit B;
Validated; Region: gatB; PRK05477"
/db_xref="CDD:180111"
misc_feature complement(348056..348937)
/gene="gatB"
/locus_tag="BbuZS7_0345"
/note="GatB/GatE catalytic domain; Region: GatB_N;
pfam02934"
/db_xref="CDD:202476"
misc_feature complement(347501..347941)
/gene="gatB"
/locus_tag="BbuZS7_0345"
/note="GatB domain; Region: GatB_Yqey; pfam02637"
/db_xref="CDD:202327"
gene complement(348936..350384)
/gene="gatA"
/locus_tag="BbuZS7_0346"
/db_xref="GeneID:7106501"
CDS complement(348936..350384)
/gene="gatA"
/locus_tag="BbuZS7_0346"
/EC_number="6.3.5.-"
/note="allows the formation of correctly charged
Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
which lack either or both of asparaginyl-tRNA or
glutaminyl-tRNA synthetases; reaction takes place in the
presence of glutamine and ATP through an activated
phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA"
/codon_start=1
/transl_table=11
/product="aspartyl/glutamyl-tRNA amidotransferase subunit
A"
/protein_id="YP_002374862.1"
/db_xref="GI:218249200"
/db_xref="GeneID:7106501"
/translation="MLDLSNLTLTKIQELVLTRKCKIYDILLAYKNNYELNKDINGYI
EFFDDSLEIAKRYDDCLKNCELEDLPLIGMLIAVKDNISIQDKSLTCASEILKGYISP
YDATVIKRLKNKGAILIGRTNMDEFAMGSTCEFSYYGATLNPLNREYVIGGSSGGSAA
VVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFSH
SIEDIALILKHTCGSDKMDSTSVDIFDDFYPLKIESLQGKNLAVIKELGEDLMDKNVA
NSFAKFKLDLLSKGINIKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYGKRISE
GLSLNDFYFKHRSNFLSEEVKRRIVLGNYLLSERYDSKYYAKACEILQNLIIPKFNKL
FESCDFIITPTSFVKPFRLGLDFDDPVKMYYSDICTVIANLIGAPAISLPYSKDEEGL
SIGMQIIGRSKKDFELLSFSKNVIRELGLNGI"
misc_feature complement(348951..350384)
/gene="gatA"
/locus_tag="BbuZS7_0346"
/note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
and related amidases [Translation, ribosomal structure and
biogenesis]; Region: GatA; COG0154"
/db_xref="CDD:30503"
misc_feature complement(348957..350351)
/gene="gatA"
/locus_tag="BbuZS7_0346"
/note="aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A
subunit; Region: gatA; TIGR00132"
/db_xref="CDD:211553"
gene complement(350392..350667)
/gene="gatC"
/locus_tag="BbuZS7_0347"
/db_xref="GeneID:7106739"
CDS complement(350392..350667)
/gene="gatC"
/locus_tag="BbuZS7_0347"
/EC_number="6.3.5.-"
/note="allows the formation of correctly charged
Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
which lack either or both of asparaginyl-tRNA or
glutaminyl-tRNA synthetases; reaction takes place in the
presence of glutamine and ATP through an activated
phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma
proteins contain an N-terminal fusion to an unknown
domain"
/codon_start=1
/transl_table=11
/product="aspartyl/glutamyl-tRNA amidotransferase subunit
C"
/protein_id="YP_002374863.1"
/db_xref="GI:218249356"
/db_xref="GeneID:7106739"
/translation="MKDIHLKNSLKLSLVTLSRESEDKFISKFEKVIKLVNKISNFEV
QINFNANKKKISTLREDKVEFSLSIEAIKKLSNSFLDGYFSSPKILE"
misc_feature complement(350395..350667)
/gene="gatC"
/locus_tag="BbuZS7_0347"
/note="aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C
subunit; Region: gatC; TIGR00135"
/db_xref="CDD:129241"
gene complement(350677..352773)
/locus_tag="BbuZS7_0348"
/db_xref="GeneID:7106653"
CDS complement(350677..352773)
/locus_tag="BbuZS7_0348"
/note="identified by match to protein family HMM PF00580"
/codon_start=1
/transl_table=11
/product="DNA helicase"
/protein_id="YP_002374864.1"
/db_xref="GI:218249690"
/db_xref="GeneID:7106653"
/translation="MDKIKKFFSSLNTSQEKIVFSKSKNPMLVLAGPGSGKTRVIIAK
IVYLIKYMNIDPNEILALTFTNKAANEMNDRINDLLKFDKKLHIQTFHSFGSWLLRVY
YKDFNENYDSNFTIWDTNDVVKFVKQIDLAPNLEMAKHIAALILKDKENFFLEKFIQF
TEKEYEYIKIYEEEKAKNNAFDFSDLIIKPILMLRQSKSLKESIQSRFKVIFVDEYQD
TNYSQFLFLKELYLDGMYFMVVGDEDQSIYSFRGARIENILEFEKTFDNVIKFYLVQN
YRSNSNIVGIANEVISKNKNRYEKQITTQNSSNKRMKFLVFQSTSDEAEYFSNLLISN
DIKTAILYRFNSQSFHFETSFLKKNIPYKVLGSIKFYDREEIKDIICLLRLFINKKDK
ISFLRMINKPSRGIGKTTLDKIISSLNDEDVNFNLFCASKKTLGLLKNRAKESLLLFL
NVYEELGKKLFEDNYINLSAFIEDVVIRFGLLDYYRKFDKDEKLRNIDELINSGIEYS
GTFEGLAIFLENSSLSPLISGDFKSNILLSSIHGVKGLEFDRVVISGLEKGLLPAEIE
ELTEDRLEEERRLFYVAITRAKSELIVTLNLRRAFRGSYKGTLPSVFFQDIDKNSYDI
IFIPEYLKENFNNFFINNKRDIGFNIGDYIIYNGEKGIVVDSWYQSNLQFVKISLRNG
KKAILSPEYIKKIIKV"
misc_feature complement(350884..352749)
/locus_tag="BbuZS7_0348"
/note="Superfamily I DNA and RNA helicases [DNA
replication, recombination, and repair]; Region: UvrD;
COG0210"
/db_xref="CDD:30559"
misc_feature complement(352489..352707)
/locus_tag="BbuZS7_0348"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:205425"
misc_feature complement(350992..>351177)
/locus_tag="BbuZS7_0348"
/note="Family description; Region: UvrD_C_2; cl15862"
/db_xref="CDD:210262"
gene complement(352776..353972)
/locus_tag="BbuZS7_0349"
/db_xref="GeneID:7106529"
CDS complement(352776..353972)
/locus_tag="BbuZS7_0349"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374865.1"
/db_xref="GI:218249577"
/db_xref="GeneID:7106529"
/translation="MKENDFIKFGSYLRKVRDSKNLTLEMVAEDIKISIKYLKALEES
NIEIFPNEVLAVGFLRTYSEYLDIDSRLISTLFKDYKSRLNNSYIGIKSEDKISNLGF
LSDNKVSEKKIFFFSLESLSIFKVFLGIVGVLLLFVFLYFREVEGYFKKFFNLSQDEK
IISNIHEVSFDKKNFWNVSLKEGDFLSLTYSDDIAKYRASFIGDDLVIVDESKKSKNI
LNLGEFKEINLDDNIRVKIIYENYYYDKLKIAHVSLESFALNVKYVSETNIDNRFNIL
NWQFDVKGTEKLPSSNYLTLYSSQKLSNVDLKIDFLNDTFFRYADENNLYGKSLFASK
GIPINLAFEKSLILFFSRLSDVNIILNDRDITPFLKEQGKEIFAVQFFWVKTPSGFDL
KVSEVY"
misc_feature complement(352923..353957)
/locus_tag="BbuZS7_0349"
/note="Predicted transcriptional regulator contains
Xre-like HTH domain [Function unknown]; Region: COG1426"
/db_xref="CDD:31615"
misc_feature complement(353754..353939)
/locus_tag="BbuZS7_0349"
/note="Helix-turn-helix domain; Region: HTH_25; pfam13413"
/db_xref="CDD:205591"
gene complement(353984..354634)
/locus_tag="BbuZS7_0350"
/db_xref="GeneID:7106827"
CDS complement(353984..354634)
/locus_tag="BbuZS7_0350"
/codon_start=1
/transl_table=11
/product="export chaperone"
/protein_id="YP_002374866.1"
/db_xref="GI:218249967"
/db_xref="GeneID:7106827"
/translation="MIKTILLLVLYPVVVFSQISANQYFEGIYAKYQNIEDMQATINF
TLKGLKQTGVLLYKFPDKFIINLDSNNQVFVSDGEFLTVYVPSLGTSFNQQLLKGSSG
GGLMKVLNSEYSVSYTNSPNLEDLDSSEPGKYIKLTFSRKLYKGAATINSFIIAFAPD
GIIRRITAFPTSGGREIVIDLTAVKFNVGILDSKFKYDPPKSSNKVDNFLYDIKKN"
misc_feature complement(354008..354634)
/locus_tag="BbuZS7_0350"
/note="Outer membrane lipoprotein-sorting protein [Cell
envelope biogenesis, outer membrane]; Region: LolA;
COG2834"
/db_xref="CDD:32662"
gene 354827..356245
/locus_tag="BbuZS7_0351"
/db_xref="GeneID:7106273"
CDS 354827..356245
/locus_tag="BbuZS7_0351"
/note="identified by match to protein family HMM PF05670;
match to protein family HMM PF05833"
/codon_start=1
/transl_table=11
/product="fibronectin/fibrinogen-binding protein"
/protein_id="YP_002374867.1"
/db_xref="GI:218249194"
/db_xref="GeneID:7106273"
/translation="MSLNYTEINTLIKEIPFTNSLITKIIQPDYKSLVLEIYNKIDNK
KFKILICLNPNTTRFHITKKNFKKNALKLRFSDFLKSKIQNGKIIKAFQMKNERIISL
EILQKDMIILFIKLWPSSPNIIATNSNFKILDAYYRRPKIKETTGEIFLKAKEIHESN
KMSDKKIMELKEEYNNTSYTSYSEFLENYYESLNDQIKKTNIKELLIEKYKKELIVLE
KRIDSLKQQIKLLENIENEKEKGELILLNINKIQKGIKEINLLNYKEEKIKISLNQSL
SPKENALQYFKAYKKGKNSFKTIQNQLKDNLDKFNLIQSKITMLKVENLIPEEEYNQE
KTAIKEKEKTPKIGLHFTYCGFEILIGRNAKENDELLRHCVKGNDYWLHTRDYPGAYV
FIKNQKNKTPSLDVLLGAGNLCVFYTKLAKKSGKADLYYTQVKNLRRVKNKKLGLVIP
KAEKNLHIKLDENLIKKIKNQT"
misc_feature <355571..356242
/locus_tag="BbuZS7_0351"
/note="Predicted RNA-binding protein homologous to
eukaryotic snRNP [Transcription]; Region: COG1293"
/db_xref="CDD:31484"
misc_feature 355874..356143
/locus_tag="BbuZS7_0351"
/note="Domain of unknown function (DUF814); Region:
DUF814; pfam05670"
/db_xref="CDD:203303"
gene 356343..357776
/gene="pyk"
/locus_tag="BbuZS7_0352"
/db_xref="GeneID:7106733"
CDS 356343..357776
/gene="pyk"
/locus_tag="BbuZS7_0352"
/EC_number="2.7.1.40"
/note="catalyzes the formation of phosphoenolpyruvate from
pyruvate"
/codon_start=1
/transl_table=11
/product="pyruvate kinase"
/protein_id="YP_002374868.1"
/db_xref="GI:218249282"
/db_xref="GeneID:7106733"
/translation="MISKLTKIVATISDLRCEPEHIKDLHDAGVNVIRLNTAHQSHED
TIKVIDNVRKISNKIALMIDTKGPEVRTANIKNPIIVKTGDRVIISTSPINEPNNFQT
NYDGFVKEVPQGSKVLIDDGELEMTVVAKLPDRLICEIKNDGQIKNKKSINTPGISLK
LQSVTEKDKGFIELAAKYNVDFIAHSFVRHSKDVQDVQEILTASGNPDVKIISKIENQ
EGIDNIEEIAKASYGIMVARGDMGVEIPAEDVPIAQLKITQTCIKYGIPVITATQMLH
TMIENPRPTRAEVSDIANAILNGTDAIMLSGETAYGKYPIEAVKMMTSIAKKVEKHRK
MTLYKDELFYDKSITRNYIIKCAIDATKLMDIKAIIVDSLKGKTARIMATYRASVPLF
ITTNSERLARELALSYGVYSNLVDNNFKRTTEFVVTSLKMLKEQGVVNDKDTVIIISG
NPNRNIEKGTEFMEINTVEDAIKGRNI"
misc_feature 356352..357737
/gene="pyk"
/locus_tag="BbuZS7_0352"
/note="pyruvate kinase; Region: pyruv_kin; TIGR01064"
/db_xref="CDD:162184"
misc_feature 356352..357698
/gene="pyk"
/locus_tag="BbuZS7_0352"
/note="Pyruvate kinase (PK): Large allosteric enzyme that
regulates glycolysis through binding of the substrate,
phosphoenolpyruvate, and one or more allosteric effectors.
Like other allosteric enzymes, PK has a high substrate
affinity R state and a low...; Region: Pyruvate_Kinase;
cl09155"
/db_xref="CDD:208991"
misc_feature order(356355..356360,356520..356522,356544..356555,
356796..356801,356817..356819,356826..356840,
356883..356885,356907..356909,356928..356930,
356964..356966,357072..357074,357126..357131,
357141..357143,357237..357239,357243..357245,
357330..357332,357336..357341,357492..357494,
357498..357500,357504..357506,357537..357539,
357546..357551,357555..357557,357561..357569)
/gene="pyk"
/locus_tag="BbuZS7_0352"
/note="domain interfaces; other site"
/db_xref="CDD:29370"
misc_feature order(356442..356444,356448..356450,356532..356534,
356901..356903,356982..356984,356988..356990,
357060..357062,357156..357158)
/gene="pyk"
/locus_tag="BbuZS7_0352"
/note="active site"
/db_xref="CDD:29370"
gene 357794..358534
/locus_tag="BbuZS7_0353"
/db_xref="GeneID:7106492"
CDS 357794..358534
/locus_tag="BbuZS7_0353"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374869.1"
/db_xref="GI:218249480"
/db_xref="GeneID:7106492"
/translation="MVENIFYSDNTNDLSFKLEEKKTHKALLTSYGSYEFFLKNECLF
KKIISNQTNNVFIISEAKSNFLINISNHNVWKIFNKNIKVNLKILKLLKTLNFINIDD
KLIENDHKIEITLNFISNIKENIKIIPIIFGKTCNKHLLKFCEFLKPFINREENSFIF
LSCFISKSTNIKKALKFEENLKHILLEKKLPNLNLILENYKSKKIFPENINAIMTISS
LFKHFEFTDSKITFNSPEYLISNSILIR"
gene complement(358553..358831)
/gene="rpmB"
/locus_tag="BbuZS7_0354"
/db_xref="GeneID:7106557"
CDS complement(358553..358831)
/gene="rpmB"
/locus_tag="BbuZS7_0354"
/note="required for 70S ribosome assembly"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L28"
/protein_id="YP_002374870.1"
/db_xref="GI:218249319"
/db_xref="GeneID:7106557"
/translation="MARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKV
NLINKKFFIPNLGRSVSIKVSANALRSISKIGLDAFLKKNCKKIENFL"
misc_feature complement(358565..358831)
/gene="rpmB"
/locus_tag="BbuZS7_0354"
/note="50S ribosomal protein L28; Reviewed; Region: rpmB;
PRK00359"
/db_xref="CDD:178987"
gene complement(358849..360414)
/locus_tag="BbuZS7_0355"
/db_xref="GeneID:7106613"
CDS complement(358849..360414)
/locus_tag="BbuZS7_0355"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374871.1"
/db_xref="GI:218249691"
/db_xref="GeneID:7106613"
/translation="MNLGLFDFILSMFSINKELTSEQIKQKRLKEVKVSLGRVSNFFN
ASKIQALPQFSRFLYNFYKIFSPLRPFAQRYKNSNKIVHFVVEKYLNENQKKSLDYIY
SFSASDNINFASDLPKNLHNNLSYLFKNITQEQIKLIDETYEALHNFFDLVLYQYHLV
LKNFDNLLPEDDFVYRPRFSSIGCGVIIDDLKDLLECISCIKNISIWKNLYDIILEIY
GNKEDFPIKSNVWIKVISSILDINKSKEILYLIRYVSGDPDYFPISVGQKPNPIARMF
FNDLTKHVATEIEKIKVLQKNNKSKILAEQLFPGISFLNLDNYNEKMNEKIVSKIMST
TGYIYCELLVYLRTYTIYFVKKDLNDIINLLIIKGQWKLIELSREMSNDMHALINIYA
SLIDFDSNLGEQGGYGNRINALLHRASLGDKSSEKLLLNIIADVNKKAFAISSEYYSK
IYSIEQRLQDCLSDYSKVSLERELIYNWKELDMDLAKSYGNNLNFGGMMKNILGSLAL
FLKLMDLYLEKKS"
gene 360524..361657
/locus_tag="BbuZS7_0356"
/db_xref="GeneID:7106530"
CDS 360524..361657
/locus_tag="BbuZS7_0356"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374872.1"
/db_xref="GI:218249882"
/db_xref="GeneID:7106530"
/translation="MNNFMRIKNLILIAILLISPSCSTNKNIVVLTDNKTIPFYINQF
NIENKANFIIKFRNNIDLQTIEKENAQIIISKNIGNTNIANHFKSVKINYNPDYPILK
HIFKQFNYKIIPLGFDIPILIYKNTHHIKKYINTKYLKEEYENFIKDGKFFISPYVSE
NLFYVISQINNVRFSFEKNKLNYNENQILKMLEYFSSFLNTKQMDLQKDFFNKYGYLK
LNKILLNKKSLLIAGLSDITFYNSLSEQEKSQIKFSYLINDNNEIVISNPNFIGILET
SVLTKKFINWILDKKTQKTLIGFNNQSQSNICFGFANGFTPYKELNLKIKHSIDGISP
FIIDETQINSHSYVLSKKTIEKENLLINEWFFSKANNLKKNKN"
gene complement(361654..363453)
/locus_tag="BbuZS7_0357"
/db_xref="GeneID:7106341"
CDS complement(361654..363453)
/locus_tag="BbuZS7_0357"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374873.1"
/db_xref="GI:218249557"
/db_xref="GeneID:7106341"
/translation="MKREIYAFLSNFIIFMCFFLGLLFSYSYFFGENFLEKHKLIATF
FDSILLFYKYFFGFFIFIVCIYFAFFVQQEIKIHLKSHNGYLFSRLYAFLLLFFIIGL
FFTFIFNLILPYIIAQRNEYKFSYDRYNLLESEANEISLKIKHIDISLAANRFFLSSD
LTDSMKQKRKHLENLIRIYDKMRIIYVNNEELLTNYYLVKSEYSKIPSYDVDLEKVKK
TFSKYPLQSLKKQDFFNIVNEFISKNDYYTANYFAYIAYVATKDDNFVVLLNLTLKFI
NENRNFEKEKMQLISEEKQKNFLFLNTEKFKLAYYGFSNLYKLLPSDNEILNYKNKSL
EKLRKRYLFFDEIEKYFEYYGINDVFLLQPDSKRGFYDYIYMQKVVAFNNHSKIIKNF
ELIRFNNTGNVILHIKIPFATLKGNSVYQNILDKDNEQSEITLTKVFVSTDSFDTNVL
EVVKINENVENLALFSNFTEFGFFLKIQNLPSAFHRVAILNLKLINTFSLSLVLLISP
ISLVLIGAFFISLFSKIEFNFNSKAMIFLVSLMIAIFSGITCLFVNYFLIVFTSLLIY
VFNSVYVSLAILSALLFFLIFKIITLNYKERLI"
gene complement(363466..364416)
/locus_tag="BbuZS7_0358"
/db_xref="GeneID:7106807"
CDS complement(363466..364416)
/locus_tag="BbuZS7_0358"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374874.1"
/db_xref="GI:218249552"
/db_xref="GeneID:7106807"
/translation="MFDSLRLIFLIICRFILIFCLFSLMFICTFYLKYKFLYFNFSIF
SYSLYYNAYIYSFPLSLVVTFMRISCPFYGIVLNSSRESFYFYCIIFVLILLFSYLGF
LVSHSFHSYYINSNRNDNFILKDEIVHFLNDKIIFSSNRPRIYGFNGVLIVSENDKGD
KGFSYQSNISNSSKIDFVENNFLEQKIYNNFVDFLFRDLKILNNFLLSLNYLNLIFNI
LGISLLLFAFSYVFNLIFSNSFAIFLYPIFIILFLKIYNVYSIEFPKIYNVIIGKSMI
SDFIPFIFCVLTFFSTYLFGFVSEYIKISKDLDNNLYKGS"
gene complement(364451..364939)
/locus_tag="BbuZS7_0359"
/db_xref="GeneID:7106802"
CDS complement(364451..364939)
/locus_tag="BbuZS7_0359"
/note="identified by match to protein family HMM PF02559"
/codon_start=1
/transl_table=11
/product="transcription factor"
/protein_id="YP_002374875.1"
/db_xref="GI:218249763"
/db_xref="GeneID:7106802"
/translation="MAFLLNQSVVYPMHGVGTIKDIRTKEFNGEIIDYYEIHFPFNDM
IFMVPVAKVDDFGIRALVSREKVEEVFDVIKEFEGQIDSKKIKDGGHEFYKKSDILDT
AKLYKFLYKKSTQKELPFYEKRILNDFELILEHEISLALQISFEEAKKKIKNILVDNK
KA"
misc_feature complement(364454..364939)
/locus_tag="BbuZS7_0359"
/note="Transcriptional regulators, similar to M. xanthus
CarD [Transcription]; Region: COG1329"
/db_xref="CDD:31520"
gene complement(364979..365572)
/locus_tag="BbuZS7_0360"
/db_xref="GeneID:7106936"
CDS complement(364979..365572)
/locus_tag="BbuZS7_0360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374876.1"
/db_xref="GI:218249599"
/db_xref="GeneID:7106936"
/translation="MANLKDIYSKPDRFYFLGVPIDVFDSRSKLISRFVYLSGHPYHS
IVIFIGLKAFLKALIFKKFRNHIKNSSLVFLNSKIVRFFYRVFKRVNIDCYDSNIVLL
ILMEILENAHKTCYIIDKDKVISKKKFLRLKESHKEISFIGYYDLKAVKRNKEMFFAN
INKLTPSVIISFCNDRYLENLFYENKFNIRTNLSVFL"
gene complement(365565..366296)
/locus_tag="BbuZS7_0361"
/db_xref="GeneID:7106850"
CDS complement(365565..366296)
/locus_tag="BbuZS7_0361"
/EC_number="2.1.1.-"
/note="in Escherichia coli RsmE methylates the N3 position
of the U1498 base in 16S rRNA; cells lacking this function
can grow, but are outcompeted by wild-type; SAM-dependent
m(3)U1498 methyltransferase"
/codon_start=1
/transl_table=11
/product="16S ribosomal RNA methyltransferase RsmE"
/protein_id="YP_002374877.1"
/db_xref="GI:218249900"
/db_xref="GeneID:7106850"
/translation="MKQIVLDENCLAGNFIIVKDAKIYHHLINVRRLKKGDKLNILLK
DKELRVSEIVKIGSNFIKFTTNKIDKIEKNNFEISIFISSLKGRKIDLVLRQIVEIGV
SEINIINADRSVSKIDISNASAKILRFSKIIDEALKQSGNKIVPKINFYNNFFYLPYS
FCTTRYYVAHPSGMILSKNESFDNFGKIGIIIGPEGCFSESEIVFFKEKGFNFVRFNT
PILRADTAIIYSLAYFKALLEDYNG"
misc_feature complement(365574..366296)
/locus_tag="BbuZS7_0361"
/note="RNA methyltransferase, RsmE family; Region:
TIGR00046"
/db_xref="CDD:129157"
misc_feature complement(365577..366296)
/locus_tag="BbuZS7_0361"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG1385"
/db_xref="CDD:31575"
gene complement(366300..367727)
/locus_tag="BbuZS7_0362"
/db_xref="GeneID:7106360"
CDS complement(366300..367727)
/locus_tag="BbuZS7_0362"
/note="identified by match to protein family HMM PF00595;
match to protein family HMM PF03572; match to protein
family HMM TIGR00225"
/codon_start=1
/transl_table=11
/product="carboxyl- protease"
/protein_id="YP_002374878.1"
/db_xref="GI:218249805"
/db_xref="GeneID:7106360"
/translation="MKNKFLICVYFLLTLGISSLVIVESIFAFDESNNKLSRSNYEQM
MIQAFEFVKENYVDPVSDEVIFEGALKGIFQSLGDPYSQYLTKKDLEEISKTTVGDYV
GIGISIIKKMHSQDKQDKAKDFDPNSACVSIVTPFEGGPAYKAGIKSGDCITAVDGKS
VYSMEVDQVVDLLKGKEGTKVKVSILRGKNLTLDFELTREKIEIQTIKYDVINSDIGY
IRIVSFNPHTSVDFRKALDNLKNKNIKSLILDLRLNTGGYFQAAIKMADDILSKGIIV
STKSRNSSKPIDYKASSKQVLPSNIKIVALIDRSSASASEVFVGALKDNKRAYIIGEK
SYGKGLIQHVVPFYTGGFKITSSKYYTPSGKSIHKVGIEPDLEIKSPDFSEEEALIYK
EIFDKKLIEGFLKGKKSITEQEIDFFVENLVKENPKYKIDKEFLGKYVFFNYYQDNNK
ELPIYNLHYDKVLKTACEYLSKLGN"
misc_feature complement(<367467..367601)
/locus_tag="BbuZS7_0362"
/note="C-terminal processing peptidase family S41; Region:
Peptidase_S41; cl02526"
/db_xref="CDD:207630"
misc_feature complement(366540..367571)
/locus_tag="BbuZS7_0362"
/note="C-terminal peptidase (prc); Region: prc; TIGR00225"
/db_xref="CDD:161775"
misc_feature complement(367125..367361)
/locus_tag="BbuZS7_0362"
/note="PDZ domain of C-terminal processing-,
tail-specific-, and tricorn proteases, which function in
posttranslational protein processing, maturation, and
disassembly or degradation, in Bacteria, Archaea, and
plant chloroplasts. May be responsible for...; Region:
PDZ_CTP_protease; cd00988"
/db_xref="CDD:29045"
misc_feature complement(order(367206..367211,367218..367223,
367356..367358))
/locus_tag="BbuZS7_0362"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29045"
misc_feature complement(366591..>367082)
/locus_tag="BbuZS7_0362"
/note="C-terminal processing peptidase; serine protease
family S41; Region: Peptidase_S41_CPP; cd07560"
/db_xref="CDD:143476"
misc_feature complement(order(366714..366716,366789..366791))
/locus_tag="BbuZS7_0362"
/note="Catalytic dyad [active]"
/db_xref="CDD:143476"
gene 368221..369363
/locus_tag="BbuZS7_0363"
/db_xref="GeneID:7106184"
CDS 368221..369363
/locus_tag="BbuZS7_0363"
/note="identified by match to protein family HMM PF01656"
/codon_start=1
/transl_table=11
/product="ATP-binding protein"
/protein_id="YP_002374879.1"
/db_xref="GI:218249941"
/db_xref="GeneID:7106184"
/translation="MIIIPVASGKGGVGKSLFSTNIAICLANEGKSVLLVDLDLGASN
LHSMLNIIPKKSIGTFLKTRINFSDIIIQSGIKNLNFIAGDSDIPELANIAASQKKII
IKNLKSLKYDYLVIDLGAGTAFNIIDFFLMSKRGVIVTTPTVTATMNAYLFLKNIIFR
LLSSVFKRGTKGNEILRTIKQNSIDLQRVYIPNLLLKLESEDPENYSKFNKLFRTISP
FMIFNMLKAPKDIEKTEKIIKSAKNYLSINLQSIGAIYKDEIVDQALNSKIPITIYKP
TSSTSKSIKKIAKKLIEIEDLTNDAELLNEEDLNESYDFVLREAQEEYIEKIEYLESL
IKNKTIESSEIIDIIKSQKREIETLRKQNMLFKKKLVEKLEKAKEV"
misc_feature 368227..368988
/locus_tag="BbuZS7_0363"
/note="FleN is a member of the Fer4_NifH superfamily. It
shares the common function as an ATPase, with the
ATP-binding domain at the N-terminus. In Pseudomonas
aeruginosa, FleN gene is involved in regulating the number
of flagella and chemotactic motility by...; Region:
FleN-like; cd02038"
/db_xref="CDD:73301"
misc_feature 368230..368826
/locus_tag="BbuZS7_0363"
/note="CobQ/CobB/MinD/ParA nucleotide binding domain;
Region: CbiA; pfam01656"
/db_xref="CDD:201907"
misc_feature order(368245..368265,368278..368280)
/locus_tag="BbuZS7_0363"
/note="P-loop; other site"
/db_xref="CDD:73301"
gene 369363..370349
/gene="lgt"
/locus_tag="BbuZS7_0364"
/db_xref="GeneID:7106247"
CDS 369363..370349
/gene="lgt"
/locus_tag="BbuZS7_0364"
/EC_number="2.4.99.-"
/note="transfers the N-acyl diglyceride moiety to the
prospective N-terminal cysteine in prolipoprotein"
/codon_start=1
/transl_table=11
/product="prolipoprotein diacylglyceryl transferase"
/protein_id="YP_002374880.1"
/db_xref="GI:218249853"
/db_xref="GeneID:7106247"
/translation="MPNYINYPSWLHPEVIQGIPITWYSLSYILIILISYKFIWYQIQ
SDNVDIKKEDYEIFMFSLVLGAILGGRLASTLVYDKSGIYYSNPWLILLPFDQHWNFT
GFRGMAIHGGFLGAIIAPLITINTKLKNTNVQKYFLKLTDYGSIAFSSGYILGRLANF
ANAELYGRVMKGGIIFPNAEPFDTNIPGVKEFASSVGLEISPHDLLINLPRIPSQLIE
GFFEGPVTFLLLWFLFKKIKKYDGFIFGVYVMLYAFFRFFIEYLREPDKELGFIITYK
PITSLSEFSFLNISMGQILSLTLMLSGLIWIIVTKKIADKKIKNNTNLAYKN"
misc_feature 369363..370328
/gene="lgt"
/locus_tag="BbuZS7_0364"
/note="prolipoprotein diacylglyceryl transferase; Region:
lgt; TIGR00544"
/db_xref="CDD:161919"
gene 370370..372382
/locus_tag="BbuZS7_0365"
/db_xref="GeneID:7106313"
CDS 370370..372382
/locus_tag="BbuZS7_0365"
/note="identified by match to protein family HMM PF00563"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374881.1"
/db_xref="GI:218249350"
/db_xref="GeneID:7106313"
/translation="MNKVNNYQNINSVIISKKEVGLRDLIKLKSIFNLIQIVKSEKAL
YSEYVKQNNIKFAIIYNYEKPIDFSINIANELKNANKIHSIIISKEKFDEEYLKLDHI
EIIKDISELEYKQSLIHQKKLFCDNKNTTLDFFLNLSELIKEIVIITNTKNEIIYINE
KGSKNLNLPMKTSGNIIKVTDIDIRDWEKLEKINLSYHTNSIPEFKNILITDCLLTLK
NNKKLHVDIFISTIAQNNIDKLITIKEISNSNKIENYKYLEIIDSQDEIQNAKEIEKL
LVNHMDIYKKKSIYLLNLDVSLTAEYEYKEDQEKLNAKILKIMYSKIMSLYSEYIFKL
KHNNLIVIISTSGGEKRIISIAKKIKKTIALAFKKEDIIIFKFNIGIIEVNLKENLEF
KIPKLMMATKISSEYKESNPTIYKEELPEAVILKNQNKIFQYILKAIKNDFFTLYYQK
INPLKKNLKPKIEILTRLFDHMGKPIPNNQIFNLIDKYNLTVEVDTLVVKKALREYKS
FVSKNGIHIFSINISPYSLKSQNFRIFLRDTLLKSQIPLQNICLEITETGILENFEII
NKYFQELKSFGIKLALDDFGSGHTSLSYIKTLPIDLLKIDGSFIKAINSSEIDFVIIK
SIKKIADTKNIKIIAEFVYNEEILKKIIELEIDYGQGFLWHKPEPI"
misc_feature 371672..372379
/locus_tag="BbuZS7_0365"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene 372476..372856
/gene="mgsA"
/locus_tag="BbuZS7_0366"
/db_xref="GeneID:7106647"
CDS 372476..372856
/gene="mgsA"
/locus_tag="BbuZS7_0366"
/EC_number="4.2.3.3"
/note="catalyzes the formation of methylglyoxal from
glycerone phosphate"
/codon_start=1
/transl_table=11
/product="methylglyoxal synthase"
/protein_id="YP_002374882.1"
/db_xref="GI:218249489"
/db_xref="GeneID:7106647"
/translation="MEKKIALIAHDKKKEDLVNFVKQNYLFLSKFKLIATGTTGSKIQ
QATDLTIFKYKSGPMGGDQQIGAEVAEGNILAIFFFRDPLTSQPHEPDVSALIRLCDV
HKIPLATNVKTAEILIKGLESLIF"
misc_feature 372485..372829
/gene="mgsA"
/locus_tag="BbuZS7_0366"
/note="Methylglyoxal synthase catalyzes the enolization of
dihydroxyacetone phosphate (DHAP) to produce
methylglyoxal. The first part of the catalytic mechanism
is believed to be similar to TIM (triosephosphate
isomerase) in that both enzymes utilize DHAP to...;
Region: MGS; cd01422"
/db_xref="CDD:29634"
misc_feature order(372497..372499,372515..372517,372581..372583,
372587..372592,372641..372646,372659..372661,
372740..372742)
/gene="mgsA"
/locus_tag="BbuZS7_0366"
/note="active site"
/db_xref="CDD:29634"
misc_feature order(372506..372508,372587..372589,372638..372643,
372647..372652,372662..372667,372683..372685,
372722..372724,372749..372751,372758..372760,
372767..372775,372779..372796,372803..372814,
372821..372823)
/gene="mgsA"
/locus_tag="BbuZS7_0366"
/note="dimer interfaces [polypeptide binding]; other site"
/db_xref="CDD:29634"
misc_feature order(372659..372661,372740..372742)
/gene="mgsA"
/locus_tag="BbuZS7_0366"
/note="catalytic residues [active]"
/db_xref="CDD:29634"
gene complement(372903..373487)
/locus_tag="BbuZS7_0367"
/db_xref="GeneID:7106566"
CDS complement(372903..373487)
/locus_tag="BbuZS7_0367"
/codon_start=1
/transl_table=11
/product="outer surface 22 kda lipoprotein (antigen
IpLA7)"
/protein_id="YP_002374883.1"
/db_xref="GI:218249536"
/db_xref="GeneID:7106566"
/translation="MYKNGFFKNYLSLFLIFLVIACTSKDSSNEYVEEQEAENSSKPD
DSKIDEHTIGHVFHAMGVVHSKKDRKSLGKNIKVFYFSEEDGHFQTIPSKENAKLIVY
FYDNVYAGEAPISISGKEAFIFVGITPDFKKIINSNLHGAKSDLIGTFKDLNIKNSKL
EITVDENNSDAKTFLESVNYIIDGVEKISPMLTN"
gene 373613..374989
/locus_tag="BbuZS7_0368"
/db_xref="GeneID:7106784"
CDS 373613..374989
/locus_tag="BbuZS7_0368"
/EC_number="3.4.11.1"
/note="catalyzes the removal of amino acids from the N
termini of peptides"
/codon_start=1
/transl_table=11
/product="aminopeptidase 1"
/protein_id="YP_002374884.1"
/db_xref="GI:218249643"
/db_xref="GeneID:7106784"
/translation="MKKQNPWIYLNEEEKNQILNFSESYKKFISKFKTEREVTAYALD
KAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMNFIVSHTDSPRLD
AKPSPISEENELTFIKTNYYGGIKKYQWLSTPLSIRGVVFLKNGEKVEINIGDNENDP
VFVIPDILPHLDRKIQRNKKSDEIVEGENLKILIGSLPIETKEKNKVKLATLQLIKEK
YKIEEEDFVSSEIEIVPAGTAKDVGFDKALIGAYGQDDKICVFTSLESIFDLEETPNK
TAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKALWNSKSISA
DVCAAINPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKN
NIAWQVATLGKVEEGGGGTVAKFLAGYGIRTIDMGPAVISMHSPMEITSKFDLYNAYL
AYKAFYRE"
misc_feature 373649..374983
/locus_tag="BbuZS7_0368"
/note="M18 Peptidase Aminopeptidase I; Region: M18_API;
cd05659"
/db_xref="CDD:193535"
misc_feature 373694..374980
/locus_tag="BbuZS7_0368"
/note="Aminopeptidase I zinc metalloprotease (M18);
Region: Peptidase_M18; pfam02127"
/db_xref="CDD:202119"
misc_feature order(373718..373720,373823..373825,373829..373831,
373916..373918,373922..373930,373934..373939,
373943..373945,373952..373954,373961..373984,
373988..373999,374006..374008,374012..374014,
374036..374044,374069..374074,374078..374083,
374087..374101,374105..374131,374171..374179,
374183..374185,374189..374203,374234..374236,
374240..374242,374252..374257,374279..374287,
374291..374302,374321..374323,374330..374356,
374471..374476,374483..374494,374501..374509,
374519..374521,374528..374533,374570..374572,
374576..374581,374588..374593,374624..374626,
374630..374647,374666..374668,374675..374677,
374702..374707,374720..374731,374741..374752,
374756..374761,374768..374773,374780..374782,
374798..374800,374804..374806,374813..374827,
374834..374836,374852..374854,374861..374863,
374870..374878,374903..374917,374921..374923,
374927..374929)
/locus_tag="BbuZS7_0368"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:193535"
misc_feature order(373895..373897,374375..374380,374468..374473,
374615..374620,374624..374626,374699..374701,
374735..374737,374837..374842,374909..374914)
/locus_tag="BbuZS7_0368"
/note="putative active site [active]"
/db_xref="CDD:193535"
misc_feature order(373895..373897,374375..374377,374468..374473,
374615..374617,374912..374914)
/locus_tag="BbuZS7_0368"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193535"
gene 374997..375275
/locus_tag="BbuZS7_0369"
/note="phosphotransferase enzyme IIb component; this gene
contains a premature stop which may be the result of
sequencing error"
/pseudo
/db_xref="GeneID:7106103"
gene complement(375297..376355)
/gene="gpsA"
/locus_tag="BbuZS7_0370"
/db_xref="GeneID:7106384"
CDS complement(375297..376355)
/gene="gpsA"
/locus_tag="BbuZS7_0370"
/EC_number="1.1.1.94"
/note="catalyzes the NAD(P)H-dependent reduction of
glycerol 3-phosphate to glycerone phosphate"
/codon_start=1
/transl_table=11
/product="NAD(P)H-dependent glycerol-3-phosphate
dehydrogenase"
/protein_id="YP_002374885.1"
/db_xref="GI:218249253"
/db_xref="GeneID:7106384"
/translation="MKISVIGAGAWGTAISKSLADKFDFNIFLWVFEEDVKNDINNDN
VNTKYLKGIKLPKNLVASSDLFEVVTMSDYIFIATPSLFTVDILKKLDQFLHSLEIKP
KLAILTKGFITFDGKTQTVIEAAERIMKGYKDEITYIVGPSHAEEVGLGVITGLVAAS
NNRENAYLFINLFSKTPISLFYSNDVFGVQIAAALKNVFAIAFGILDAYKLNYPNLIG
NNTESFLFSISLNNIKDIAMELGGRNIETFLFLSGSGDLDVTCRSMFGRNRRFGNEIV
SKNILESFLSIDDLISNIEKIGYLPEGVLAAKSIFFFFKQLNRDLNPNSLLSVIYKIL
NKELEPKSVIEYMRDVRQ"
misc_feature complement(375315..376355)
/gene="gpsA"
/locus_tag="BbuZS7_0370"
/note="NAD(P)H-dependent glycerol-3-phosphate
dehydrogenase; Validated; Region: gpsA; PRK00094"
/db_xref="CDD:178859"
misc_feature complement(375858..376352)
/gene="gpsA"
/locus_tag="BbuZS7_0370"
/note="NAD-dependent glycerol-3-phosphate dehydrogenase
N-terminus; Region: NAD_Gly3P_dh_N; pfam01210"
/db_xref="CDD:201664"
misc_feature complement(375315..375806)
/gene="gpsA"
/locus_tag="BbuZS7_0370"
/note="NAD-dependent glycerol-3-phosphate dehydrogenase
C-terminus; Region: NAD_Gly3P_dh_C; pfam07479"
/db_xref="CDD:116100"
gene complement(376375..378666)
/locus_tag="BbuZS7_0371"
/db_xref="GeneID:7106462"
CDS complement(376375..378666)
/locus_tag="BbuZS7_0371"
/note="identified by match to protein family HMM PF00004"
/codon_start=1
/transl_table=11
/product="ATP-dependent Clp protease subunit A"
/protein_id="YP_002374886.1"
/db_xref="GI:218249724"
/db_xref="GeneID:7106462"
/translation="MYDRRALNCLFFNTFLFFMESRHLVFTEEHIFYGLIKSDKVKEL
LNLCAIDFYKLNKQLEEFFSKLPLRGNYIPDYVSSMDYLYDDIISVLFFYKKPYKIQE
KDLLWVLVKKRKNSILDALLSSGFNLTIFDKLIEAHDYLAVNTKSASGDSELIAEYIH
NNAPKRKGGFHIFDDKRDELDQNNIFLESKDSIGNFLTNVIDTLDLKYNPLIGRSQEL
SRLIQVILRKHKSNPILFGEPGVGKTVLIQGLAYKIKIENVPKDLIGYEIYSLDIGRL
VSGTKYRGDLESRVNRVLDFLSSRKKVMLFIDEIHMIVGAGATSFGSMDISNLLKPIL
TLGKIKFIGATTEYEYRKFFLKDKALMRRFQSIELKEPNFEDAYNILQEIKKDYERYH
NVEYTDEAIQACILMSQKYIKDRFLPDKAFDILDELGSKFKLENIKRIITKDDVCDLI
KSIVGSNIFNFEEYDGELLINLENRIKKELIMHDNLVLDLILNIKLLKFNLLANRSTI
GIFAFIGASGSGKCKLMDILSEEFKIPKFSLNMGEYNDFNSLDRLIGPVLSNEGYYES
TRFFKFLNKSSNSIIFLSDFDKCNKRVLDFFLEGFKTGKLFDGLGKKVSLSESLIVIS
INAESKELNSIGFRNKMAGENDFNFILKKRLPNEFLELIDHVFVFKSIDELDFEKIIF
NELNYFARILRDRKFDVFFEKSVVDYIREKIYGKGYSLKSVRKFIFKELGKLLIDEIL
FKKIENSGKIKIYLDETIKYEFL"
misc_feature complement(376399..378612)
/locus_tag="BbuZS7_0371"
/note="ATP-binding subunits of Clp protease and DnaK/DnaJ
chaperones [Posttranslational modification, protein
turnover, chaperones]; Region: clpA; COG0542"
/db_xref="CDD:30888"
misc_feature complement(377566..378033)
/locus_tag="BbuZS7_0371"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(377935..377958)
/locus_tag="BbuZS7_0371"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(377629..377631,377743..377745,
377932..377955))
/locus_tag="BbuZS7_0371"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(377740..377757)
/locus_tag="BbuZS7_0371"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(377578..377580)
/locus_tag="BbuZS7_0371"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature complement(376687..377145)
/locus_tag="BbuZS7_0371"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(376411..376635)
/locus_tag="BbuZS7_0371"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; cl11083"
/db_xref="CDD:209247"
gene complement(378677..379894)
/gene="tyrS"
/locus_tag="BbuZS7_0372"
/db_xref="GeneID:7106897"
CDS complement(378677..379894)
/gene="tyrS"
/locus_tag="BbuZS7_0372"
/EC_number="6.1.1.1"
/note="identified by match to protein family HMM PF00579;
match to protein family HMM PF01479; match to protein
family HMM TIGR00234"
/codon_start=1
/transl_table=11
/product="tyrosyl-tRNA synthetase"
/protein_id="YP_002374887.1"
/db_xref="GI:218249813"
/db_xref="GeneID:7106897"
/translation="MNLALSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSS
LHIGHLIPFLAMMHLRQHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLI
KNQLQRITKFTSECFIHNSNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRMDFGLS
FIEFNYQLLQSYDYYMLNKIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPL
ITRSDGKKMGKSEKGAVYLDSNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIEL
ISNFKGNSLNKAKEILAFEITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFS
SLKEEILLVDLMLDSKIVPSKSEGRRLIDSGGVYINGKRVESQSHLLTKKDFNNNEVE
LRVGKKKFLRIVI"
misc_feature complement(378680..379894)
/gene="tyrS"
/locus_tag="BbuZS7_0372"
/note="tyrosyl-tRNA synthetase; Validated; Region:
PRK05912"
/db_xref="CDD:180311"
misc_feature complement(378998..379801)
/gene="tyrS"
/locus_tag="BbuZS7_0372"
/note="catalytic core domain of tyrosinyl-tRNA synthetase;
Region: TyrRS_core; cd00805"
/db_xref="CDD:173902"
misc_feature complement(order(379208..379219,379238..379243,
379319..379321,379328..379333,379337..379339,
379376..379378,379385..379387,379397..379399,
379748..379753,379757..379759,379778..379786,
379790..379792))
/gene="tyrS"
/locus_tag="BbuZS7_0372"
/note="active site"
/db_xref="CDD:173902"
misc_feature complement(379748..379759)
/gene="tyrS"
/locus_tag="BbuZS7_0372"
/note="HIGH motif; other site"
/db_xref="CDD:173902"
misc_feature complement(order(379388..379393,379400..379405,
379409..379411,379457..379462,379466..379477,
379481..379486,379493..379501,379505..379510,
379664..379669,379676..379678))
/gene="tyrS"
/locus_tag="BbuZS7_0372"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:173902"
misc_feature complement(379205..379219)
/gene="tyrS"
/locus_tag="BbuZS7_0372"
/note="KMSKS motif; other site"
/db_xref="CDD:173902"
misc_feature complement(378680..378871)
/gene="tyrS"
/locus_tag="BbuZS7_0372"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:29105"
misc_feature complement(order(378749..378751,378755..378778,
378797..378799,378803..378808,378815..378820,
378824..378829,378833..378838))
/gene="tyrS"
/locus_tag="BbuZS7_0372"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:29105"
gene complement(379891..381228)
/gene="glyS"
/locus_tag="BbuZS7_0373"
/db_xref="GeneID:7106192"
CDS complement(379891..381228)
/gene="glyS"
/locus_tag="BbuZS7_0373"
/EC_number="6.1.1.14"
/note="Catalyzes a two-step reaction, first charging a
glycine molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="glycyl-tRNA synthetase"
/protein_id="YP_002374888.1"
/db_xref="GI:218249531"
/db_xref="GeneID:7106192"
/translation="MVRMEDIISLAKRKGFVFQSSEVYGGLSGAWDYGPLGVELKKNI
KKEWWKSMVYLHENIVGLDSAIFMRPEIWRASGHVDGFSDSMVDCKDCKSRFRADFID
LSKNCPNCKVGNNFTSPRSFNLMFKTHIGVVEDSSSEVYLRPETAQGIFVNFRNVLDS
SRLKIPFGIAQVGKAFRNEIVTKNFIFRTCEFEQMEMQFFVHPKQIDEWFCYWQQNRM
NFFIETLKISPDRLRFKAHDSTQLAHYAKAAFDIEYEFPFGFQEVEGIHNRGNYDLTQ
HAKFSNKPKVFEYHDLLTKEKYVPYVIETSAGLTRSVLMTLCDAYSEEELSDGDKRIV
LRLHPKLAPYKIAIFPLVKKVELTEIARRIYMELCDDFHIFYDDSGTIGKRYRRQDEI
GTPYCVTIDYNTIEDETVTVRERNNMTQKRIFINDLYSYIKTEILNYKEDFNK"
misc_feature complement(379921..381228)
/gene="glyS"
/locus_tag="BbuZS7_0373"
/note="glycyl-tRNA synthetase; Provisional; Region:
PRK04173"
/db_xref="CDD:179765"
misc_feature complement(380278..381210)
/gene="glyS"
/locus_tag="BbuZS7_0373"
/note="Glycyl-tRNA synthetase (GlyRS)-like class II core
catalytic domain. GlyRS functions as a homodimer in
eukaryotes, archaea and some bacteria and as a
heterotetramer in the remainder of prokaryotes. It is
responsible for the attachment of glycine to the 3'...;
Region: GlyRS-like_core; cd00774"
/db_xref="CDD:73227"
misc_feature complement(order(380401..380403,380656..380658,
380749..380751,380761..380763,380842..380853,
381022..381024,381028..381036,381043..381048,
381064..381066,381082..381084,381106..381108,
381184..381186))
/gene="glyS"
/locus_tag="BbuZS7_0373"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:73227"
misc_feature complement(381028..381051)
/gene="glyS"
/locus_tag="BbuZS7_0373"
/note="motif 1; other site"
/db_xref="CDD:73227"
misc_feature complement(order(380296..380298,380305..380307,
380311..380313,380317..380319,380422..380424,
380440..380445,380641..380643,380647..380649,
380653..380655,380662..380670,380692..380694,
380698..380700,380788..380790,380794..380796))
/gene="glyS"
/locus_tag="BbuZS7_0373"
/note="active site"
/db_xref="CDD:73227"
misc_feature complement(380692..380703)
/gene="glyS"
/locus_tag="BbuZS7_0373"
/note="motif 2; other site"
/db_xref="CDD:73227"
misc_feature complement(380296..380307)
/gene="glyS"
/locus_tag="BbuZS7_0373"
/note="motif 3; other site"
/db_xref="CDD:73227"
misc_feature complement(379921..380280)
/gene="glyS"
/locus_tag="BbuZS7_0373"
/note="GlyRS Glycyl-anticodon binding domain. GlyRS
belongs to class II aminoacyl-tRNA synthetases (aaRS).
This alignment contains the anticodon binding domain,
which is responsible for specificity in tRNA-binding, so
that the activated amino acid is...; Region:
GlyRS_anticodon; cd00858"
/db_xref="CDD:29798"
misc_feature complement(order(379990..379992,379996..379998,
380026..380028,380050..380052,380068..380070,
380173..380178))
/gene="glyS"
/locus_tag="BbuZS7_0373"
/note="anticodon binding site; other site"
/db_xref="CDD:29798"
gene complement(381246..382718)
/gene="gltX"
/locus_tag="BbuZS7_0374"
/db_xref="GeneID:7106608"
CDS complement(381246..382718)
/gene="gltX"
/locus_tag="BbuZS7_0374"
/EC_number="6.1.1.17"
/note="Charges one glutamine molecule and pairs it to its
corresponding RNA trinucleotide during protein
translation"
/codon_start=1
/transl_table=11
/product="glutamyl-tRNA synthetase"
/protein_id="YP_002374889.1"
/db_xref="GI:218249627"
/db_xref="GeneID:7106608"
/translation="MSTRVRYAPSPTGLQHIGGIRTALFNYFFAKSCGGKFLLRIEDT
DQSRYSPEAENDLYSSLKWLGISFDEGPVVGGDYAPYVQSQRSAIYKQYAKYLIESGH
AYYCYCSPERLERIKKIQNINKMPPGYDRHCRNLSNEEVENALIKKIKPVVRFKIPLE
GDTSFDDILLGRITWANKDISPDPVILKSDGLPTYHLANVVDDYLMKITHVLRAQEWV
SSGPLHVLLYKAFKWKPPIYCHLPMVMGNDGQKLSKRHGSTALRQFIEDGYLPEAIIN
YVTLLGWSYDDKREFFSKNDLEQFFSIEKINKSPAIFDYHKLDFFNSYYIREKKDEDL
FNLLLPFFQKKGYVSKPSTLEENQKLKLLIPLIKSRIKKLSDALNMTKFFYEDIKSWN
LDEFLSRKKTAKEVCSILELIKPILEGFEKRSSEENDKIFYDFAESNGFKLGEILLPI
RIAALGSKVSPPLFDSLKLIGKSKVFERIKLAQEFLRINE"
misc_feature complement(381255..382715)
/gene="gltX"
/locus_tag="BbuZS7_0374"
/note="glutamyl-tRNA synthetase, bacterial family; Region:
gltX_bact; TIGR00464"
/db_xref="CDD:161891"
misc_feature complement(<382398..382709)
/gene="gltX"
/locus_tag="BbuZS7_0374"
/note="catalytic core domain of discriminating
glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
/db_xref="CDD:173905"
misc_feature complement(order(382398..382400,382593..382595,
382653..382658,382662..382667,382689..382697,
382701..382703))
/gene="gltX"
/locus_tag="BbuZS7_0374"
/note="active site"
/db_xref="CDD:173905"
misc_feature complement(382662..382673)
/gene="gltX"
/locus_tag="BbuZS7_0374"
/note="HIGH motif; other site"
/db_xref="CDD:173905"
misc_feature complement(381735..>382157)
/gene="gltX"
/locus_tag="BbuZS7_0374"
/note="catalytic core domain of discriminating
glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
/db_xref="CDD:173905"
misc_feature complement(order(381963..381968,381990..381995,
382068..382073,382077..382082,382122..382124,
382134..382136))
/gene="gltX"
/locus_tag="BbuZS7_0374"
/note="active site"
/db_xref="CDD:173905"
misc_feature complement(381954..381968)
/gene="gltX"
/locus_tag="BbuZS7_0374"
/note="KMSKS motif; other site"
/db_xref="CDD:173905"
gene complement(382731..383498)
/locus_tag="BbuZS7_0375"
/db_xref="GeneID:7106086"
CDS complement(382731..383498)
/locus_tag="BbuZS7_0375"
/codon_start=1
/transl_table=11
/product="P31-23"
/protein_id="YP_002374890.1"
/db_xref="GI:218249337"
/db_xref="GeneID:7106086"
/translation="MVEKIRLGFNIIFLGLFIYFLAILRFQMKLSFILFNYQFIVVYF
LLVIVFNVIYSQYFFPRLYFILNGMEDTFTFLKLKMVRKKLKSVFEISILLRFILIKQ
DKKSLDELYFYLKDTRLRHKTIIELYSVLISFREKEKASSLILNYKYSRNKWVKYCEA
LSMLSFEEHSKLKELVNFLDKFFLKNDIFTIYFYYLLRKSKTSFDLLESKKIEIRNRY
YKFKNRIDSKHTKLLGSNLFFVVFYYIYDFSKKDVFY"
gene 383623..384762
/locus_tag="BbuZS7_0376"
/db_xref="GeneID:7106633"
CDS 383623..384762
/locus_tag="BbuZS7_0376"
/note="identified by match to protein family HMM PF01966"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374891.1"
/db_xref="GI:218249382"
/db_xref="GeneID:7106633"
/translation="MQNSESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWNL
KSYIKERKNFFSDDSVKKEYEEIHKKFNEEAISSYHVIISNLEEIYENCKRNKKIYYQ
DIMPTVKKVIEFYKKQKKIFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYK
TVELCSIALLHKIGFLFIPSKISEKKEALTEEELEIIKKYPIISYKIASTSNLSRSIC
LTLLTHKENLDGTGYPKGLTSENISIESNIIGAASAYSAIILDKAYKKSFNSGASIIE
LIKDADKKFDKRVLKLIINAISSCPLDFIVELNDNSIAKIVDIDESNPNLPYINYIIK
NGKVIDKNEQSSVQSIPNTNTGIKKILNQNEIELIKNKYSLIDII"
misc_feature 383668..384612
/locus_tag="BbuZS7_0376"
/note="c-di-GMP phosphodiesterase class II (HD-GYP domain)
[Signal transduction mechanisms]; Region: COG2206"
/db_xref="CDD:32388"
gene 384785..385498
/locus_tag="BbuZS7_0377"
/db_xref="GeneID:7106679"
CDS 384785..385498
/locus_tag="BbuZS7_0377"
/note="identified by match to protein family HMM PF01048;
match to protein family HMM TIGR01704"
/codon_start=1
/transl_table=11
/product="nucleosidase, Pfs protein"
/protein_id="YP_002374892.1"
/db_xref="GI:218249937"
/db_xref="GeneID:7106679"
/translation="MILIISAMQEESEEINKILDNKEEIVLNNYLENKKIYKGKILGK
DVISLTTGIGKVNAATWSSQIISKYKITHIINSGSSGGIKENSNLKILDIIVSSETAY
YDFDLTKFGHKIGQVPNLPQKFKADEELLKKVANIVDNKLLNIDIHIGLILTGDQFVD
NEKNLETIKKNFKDALAVDMEGAAIAQVAHIFKIPFIIIRSISDLPNNKDNHIDFNKF
LKTSSINSSKMTKELIRLI"
misc_feature 384785..385495
/locus_tag="BbuZS7_0377"
/note="5'-methylthioadenosine/S-adenosylhomocysteine
nucleosidase; Validated; Region: PRK05584"
/db_xref="CDD:180148"
misc_feature 384788..385495
/locus_tag="BbuZS7_0377"
/note="5'-methylthioadenosine/S-adenosylhomocysteine
nucleosidase; Region: MTA/SAH-Nsdase; TIGR01704"
/db_xref="CDD:130765"
gene 385495..386673
/gene="metK"
/locus_tag="BbuZS7_0378"
/db_xref="GeneID:7106243"
CDS 385495..386673
/gene="metK"
/locus_tag="BbuZS7_0378"
/EC_number="2.5.1.6"
/note="catalyzes the formation of S-adenosylmethionine
from methionine and ATP; methionine adenosyltransferase"
/codon_start=1
/transl_table=11
/product="S-adenosylmethionine synthetase"
/protein_id="YP_002374893.1"
/db_xref="GI:218249569"
/db_xref="GeneID:7106243"
/translation="MNKIIAANQTLTSEAVSEGHPDKIADQISDAILDEILKEDKNAK
VACEVIIAQNLVVIAGEINSPVKKNIDIKEVAKNIIKDIGYTNIDYGLDYKTITVIDA
IGNQSRDIINAIEKKGSNALGAGDQGIIFGYACDETKNFLPAPYELANSILKKASNLR
KSGAIKWLRPDSKSQVTIEYDKNRNPVKIKNIIVSHQHHPNISQKLIQQTIIEEIIKP
TVQDKSMLDENTAYCINPSGNFVIGGPTGDTGLTGRKIIADSYGGFARHGGGAYSGKD
ATKVDRSAAYMARYIAKNMVAAGISKEFELQLAYAIGIKNPISIQITGGINDPKYANK
ILNFIVNNFDLTPNGIIEKLKLKQPIYLKTCTYGHFGKNEFEWEKLDFVKKIQTALKK
"
misc_feature 385522..386664
/gene="metK"
/locus_tag="BbuZS7_0378"
/note="S-adenosylmethionine synthetase; Region: metK;
TIGR01034"
/db_xref="CDD:162167"
misc_feature 385528..385815
/gene="metK"
/locus_tag="BbuZS7_0378"
/note="S-adenosylmethionine synthetase, N-terminal domain;
Region: S-AdoMet_synt_N; pfam00438"
/db_xref="CDD:201226"
misc_feature 385858..386214
/gene="metK"
/locus_tag="BbuZS7_0378"
/note="S-adenosylmethionine synthetase, central domain;
Region: S-AdoMet_synt_M; pfam02772"
/db_xref="CDD:202384"
misc_feature 386218..386631
/gene="metK"
/locus_tag="BbuZS7_0378"
/note="S-adenosylmethionine synthetase, C-terminal domain;
Region: S-AdoMet_synt_C; pfam02773"
/db_xref="CDD:111646"
gene 386670..387143
/gene="luxS"
/locus_tag="BbuZS7_0379"
/db_xref="GeneID:7106819"
CDS 386670..387143
/gene="luxS"
/locus_tag="BbuZS7_0379"
/EC_number="4.4.1.21"
/note="catalyzes the hydrolysis of S-ribosylhomocysteine
to homocysteine and autoinducer-2"
/codon_start=1
/transl_table=11
/product="S-ribosylhomocysteinase"
/protein_id="YP_002374894.1"
/db_xref="GI:218249592"
/db_xref="GeneID:7106819"
/translation="MKKITSFTIDHTKLNPGIYVSRKDTFENVIFTTIDIRIKAPNIE
PIIENAAIHTIEHIGATLLRNNEVWTEKIVYFGPMGCRTGFYLIIFGDYESKDLVDLV
SWLFSEIVNFSEPIPGASDKECGNYKEHNLDMAKYESSKYLQILNNIKEENLKYP"
misc_feature 386673..387140
/gene="luxS"
/locus_tag="BbuZS7_0379"
/note="S-Ribosylhomocysteinase (LuxS); Region: LuxS;
pfam02664"
/db_xref="CDD:202337"
gene complement(387154..387816)
/locus_tag="BbuZS7_0380"
/db_xref="GeneID:7106843"
CDS complement(387154..387816)
/locus_tag="BbuZS7_0380"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374895.1"
/db_xref="GI:218249476"
/db_xref="GeneID:7106843"
/translation="MRRNFLFFFVFMLNTFRIYSGIPSYLNVYNGVGLGVDNFTQDLF
FYERLKYQFFSGAGVNVSQNLAFGGEFNLDIKFLPSHTPYTNEIIFMLDDQAYLKHSL
NYFIIKDVSFSLRMYGNYFFLSYTPMFSLIFFTGLKFSYIGAKICFVDSRDWVLLDNF
VLGIDIGARINVDFIFLEYTISPIFYNKPLLLNQMHKITLGFILQFDVATKNESEILS
IL"
gene complement(387843..388262)
/locus_tag="BbuZS7_0381"
/db_xref="GeneID:7106553"
CDS complement(387843..388262)
/locus_tag="BbuZS7_0381"
/note="identified by match to protein family HMM PF01230"
/codon_start=1
/transl_table=11
/product="protein kinase C1 inhibitor"
/protein_id="YP_002374896.1"
/db_xref="GI:218249844"
/db_xref="GeneID:7106553"
/translation="MYDCIFCKIINKELPSYKVYEDDLVLAFLDINPLTVGHTLVIPK
EHSESLLNMDDKFNERVLKVCKKISNALKRINSSIYGGINIYSALGAGAGQEVFHTHF
HVIPRFKNDGFGFKRGNKLNLEVEKFKELSMQISMNI"
misc_feature complement(387942..388256)
/locus_tag="BbuZS7_0381"
/note="HINT (histidine triad nucleotide-binding protein)
subgroup: Members of this CD belong to the superfamily of
histidine triad hydrolases that act on alpha-phosphate of
ribonucleotides. This subgroup includes members from all
three forms of cellular life; Region: HINT_subgroup;
cd01277"
/db_xref="CDD:29590"
misc_feature complement(order(387948..387956,387960..387962,
387966..387968))
/locus_tag="BbuZS7_0381"
/note="HIT family signature motif; other site"
/db_xref="CDD:29590"
misc_feature complement(387960..387962)
/locus_tag="BbuZS7_0381"
/note="catalytic residue [active]"
/db_xref="CDD:29590"
gene complement(388313..389677)
/gene="mgtE"
/locus_tag="BbuZS7_0382"
/db_xref="GeneID:7106224"
CDS complement(388313..389677)
/gene="mgtE"
/locus_tag="BbuZS7_0382"
/note="identified by match to protein family HMM PF00571;
match to protein family HMM PF01769; match to protein
family HMM PF03448; match to protein family HMM TIGR00400"
/codon_start=1
/transl_table=11
/product="magnesium transporter"
/protein_id="YP_002374897.1"
/db_xref="GI:218249709"
/db_xref="GeneID:7106224"
/translation="MIDIDELRIFLKEKSYSKIKEKFLKHDSFDIAEALKRLNGTELI
LLYRFLPKKIAVETFSNFDQSTKNKLANSFTNKEISEMIDELNLDDVIDLLEEVPANV
VQRFLASSTEENREIINKFLSYSDDSAGSIVTIEYVELKEDFTVGKALDYIRRVAKTK
EDIYTYYITDDEKHLKGVIKIEDLILAKDDVILSSIMRSSGFYIVGVNDEKEDVALLF
QKHDITSVPVVDNEGRMIGVIIIDDILEVIQSVNTEDFQMIAAVKPLDTSYLDTSILV
MTKNRIIWLLVLMVSSTFTATIISNYQNLMLSLVVLASFIPLLMDTSGNAGSQASALI
IRELALGTVKVKDFFKVFLKEICVSILVGAILASVNFLRIVFFVAPHHSDKLKIAFVV
SSCLMVSLTVAKILGGLLPIVAKLLKLDPALMAGPLITTIADAITLIAYFNIAKWVLV
SYAV"
misc_feature complement(388325..389677)
/gene="mgtE"
/locus_tag="BbuZS7_0382"
/note="Mg2+ transporter (mgtE); Region: mgtE; TIGR00400"
/db_xref="CDD:129495"
misc_feature complement(389297..389590)
/gene="mgtE"
/locus_tag="BbuZS7_0382"
/note="MgtE intracellular N domain; Region: MgtE_N;
pfam03448"
/db_xref="CDD:146204"
misc_feature complement(388934..389260)
/gene="mgtE"
/locus_tag="BbuZS7_0382"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domain in the
magnesium transporter, MgtE. MgtE and its homologs are
found in eubacteria, archaebacteria, and eukaryota.
Members of this family transport Mg2+ or other...; Region:
CBS_pair_Mg_transporter; cd04606"
/db_xref="CDD:73106"
misc_feature complement(388343..388735)
/gene="mgtE"
/locus_tag="BbuZS7_0382"
/note="Divalent cation transporter; Region: MgtE;
pfam01769"
/db_xref="CDD:110745"
gene complement(389731..391155)
/locus_tag="BbuZS7_0383"
/db_xref="GeneID:7106882"
CDS complement(389731..391155)
/locus_tag="BbuZS7_0383"
/EC_number="3.2.1.28"
/codon_start=1
/transl_table=11
/product="trehalase"
/protein_id="YP_002374898.1"
/db_xref="GI:218249239"
/db_xref="GeneID:7106882"
/translation="MNKKMFPKIYYYDQDFIDIYNKSLSWIQDKVILQKVADRGKKDK
NYYSENCDYIDQMQACMSSFFLVYSNGEYSSTSAIDKFYQLQEESGAIRARYDNNNAI
IDLDENEENIGFPIFAWAEYNLYHKTGNKKRISEVLPILDKYYKWIESKFLKENGLYS
IDVNKIFYKNSPRVDAYYPIDFNSLQVHNAYCISKLADILNDKNLSLEYKKRFFSLKV
KINSLMWSEKDGFYYDLDVNENILEIKTIVGFFPMLSEIPSEDRIERMIFYLKSTNHF
GTPNPFPTLSVSEPGFSEDGNGYYGSVYTYMNFFVIKGLEYCGRANIAREFTIRHLYY
ILDTLMPFNKIKGHIWEAYRPMQEGPAYFDSNKKTYTEKGLICYLALFSISLMIENII
GLTISLPDKTVYWNIPTLEIMGIESLSLKKNQTTIICNKGKRGWEIKMESEKLYYFTI
NILNKKEKTLPIPSGRCSMLLDKL"
misc_feature complement(389734..391002)
/locus_tag="BbuZS7_0383"
/note="Neutral trehalase [Carbohydrate transport and
metabolism]; Region: TreA; COG1626"
/db_xref="CDD:31813"
misc_feature complement(390097..>390621)
/locus_tag="BbuZS7_0383"
/note="Bacterial alpha-L-rhamnosidase; Region:
Bac_rhamnosid; cl01801"
/db_xref="CDD:207482"
gene complement(391268..392293)
/gene="bmpB"
/locus_tag="BbuZS7_0384"
/db_xref="GeneID:7106780"
CDS complement(391268..392293)
/gene="bmpB"
/locus_tag="BbuZS7_0384"
/note="identified by match to protein family HMM PF02608"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374899.1"
/db_xref="GI:218249971"
/db_xref="GeneID:7106780"
/translation="MRIVIFIFGILLTSCFSRNGIESSSKKIKISMLVDGVLDDKSFN
ASANEALLRLKKDFPENIEEVFSCAISGVYSSYVSDLDNLKRNGSDLIWLVGYMLTDA
SLLVSSENPKISYGIIDPIYGDDVQIPENLIAVVFRVEQGAFLAGYIAAKKSFSGKIG
FIGGMKGNIVDAFRYGYESGAKYANKDIEIISEYSNSFSDVDIGRTIASKMYSKGIDV
IHFAAGLAGIGVIEAAKNLGDGYYVIGADQDQSYLAPKNFITSVIKNIGDALYLITGE
YIKNNNVWEGGKVVQMGLRAGVIGLPNANEFEYIKVLERKIINKEIIVPCNQEEYEIF
IKQILKL"
misc_feature complement(391292..392293)
/gene="bmpB"
/locus_tag="BbuZS7_0384"
/note="Uncharacterized ABC-type transport system,
periplasmic component/surface lipoprotein [General
function prediction only]; Region: Med; COG1744"
/db_xref="CDD:31930"
misc_feature complement(391391..392200)
/gene="bmpB"
/locus_tag="BbuZS7_0384"
/note="Periplasmic binding domain of basic membrane
lipoprotein, PnrA, in Treponema pallidum and its homologs
from other bacteria and Archaea; Region:
PBP1_BmpA_PnrA_like; cd06354"
/db_xref="CDD:107349"
misc_feature complement(order(391502..391504,391553..391555,
391622..391624,391700..391702,391784..391786,
391937..391939,392162..392164,392189..392191))
/gene="bmpB"
/locus_tag="BbuZS7_0384"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107349"
gene complement(392380..393399)
/gene="bmpA"
/locus_tag="BbuZS7_0385"
/db_xref="GeneID:7106277"
CDS complement(392380..393399)
/gene="bmpA"
/locus_tag="BbuZS7_0385"
/note="identified by match to protein family HMM PF02608"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374900.1"
/db_xref="GI:218249180"
/db_xref="GeneID:7106277"
/translation="MNKILLLILLESIVFLSCSGKGSLGSEIPKVSLIIDGTFDDKSF
NESALNGVKKVKEEFKIELVLKESSSNSYLSDLEGLKDAGSDLIWLIGYRFSDMAKVA
ALQNPDMKYAIIDPIYSNDPIPANLVGMTFRAQEGAFLTGYIAARLSKTGKIGFLGGI
EGEIVDAFRYGYEAGAKYANKDIKISTQYIGSFADLEAGRSVATRMYSDEIDIIHHAA
GLGGIGAIEVAKELGSGHYIIGVDEDQAYLAPDNVITSTTKDVGRALNIFTSNHLKTN
TFEGGKLINYGLKEGVVGFVRNPKMISFELEKEIDNLSSKIINKEIIVPSNKESYEKF
LKEFI"
misc_feature complement(392395..393366)
/gene="bmpA"
/locus_tag="BbuZS7_0385"
/note="Uncharacterized ABC-type transport system,
periplasmic component/surface lipoprotein [General
function prediction only]; Region: Med; COG1744"
/db_xref="CDD:31930"
misc_feature complement(392515..393312)
/gene="bmpA"
/locus_tag="BbuZS7_0385"
/note="Periplasmic binding domain of basic membrane
lipoprotein, PnrA, in Treponema pallidum and its homologs
from other bacteria and Archaea; Region:
PBP1_BmpA_PnrA_like; cd06354"
/db_xref="CDD:107349"
misc_feature complement(order(392623..392625,392674..392676,
392743..392745,392821..392823,392905..392907,
393055..393057,393265..393267,393292..393294))
/gene="bmpA"
/locus_tag="BbuZS7_0385"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107349"
gene complement(393441..394502)
/gene="bmpC"
/locus_tag="BbuZS7_0386"
/db_xref="GeneID:7106717"
CDS complement(393441..394502)
/gene="bmpC"
/locus_tag="BbuZS7_0386"
/note="identified by match to protein family HMM PF02608"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374901.1"
/db_xref="GI:218249354"
/db_xref="GeneID:7106717"
/translation="MFKRFIFITLSLLVFACFKSNKKSIKSDKVVVGVLAHGSFYDKG
YNQSVHDGVVKLRDNFGIKLITKSLRPYPIEGKRLLTVDEAMTEDAYEVQKNPLNLFW
LIGYRFSDLSVKLSYERPDIYYGIIDAFDYGDIQVPKNSLAIKFRNEEAAFLAGYIAA
KMSRKEKIGFLTGPMSEHVKDFKFGFKAGIFYANPKLRLVSKKAPSLFDKEKGKAMAL
FMYKEDKVGVIFPIAGITGLGVYDAAKELGPKYYVIGLNQDQSYIAPQNVITSIIKDI
GKVIYSISSEYINNRVFKGGIIIDRGLKEGVIEIVKDPDVLNNRLVDEVIDLENKIIS
GEIIVPDSEYAFDLFKSKL"
misc_feature complement(393453..394502)
/gene="bmpC"
/locus_tag="BbuZS7_0386"
/note="Uncharacterized ABC-type transport system,
periplasmic component/surface lipoprotein [General
function prediction only]; Region: Med; COG1744"
/db_xref="CDD:31930"
misc_feature complement(393573..394391)
/gene="bmpC"
/locus_tag="BbuZS7_0386"
/note="Periplasmic binding domain of basic membrane
lipoprotein, PnrA, in Treponema pallidum and its homologs
from other bacteria and Archaea; Region:
PBP1_BmpA_PnrA_like; cd06354"
/db_xref="CDD:107349"
misc_feature complement(order(393681..393683,393732..393734,
393801..393803,393882..393884,393966..393968,
394119..394121,394365..394367))
/gene="bmpC"
/locus_tag="BbuZS7_0386"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107349"
gene complement(394819..395844)
/gene="bmpD"
/locus_tag="BbuZS7_0387"
/db_xref="GeneID:7106651"
CDS complement(394819..395844)
/gene="bmpD"
/locus_tag="BbuZS7_0387"
/note="identified by match to protein family HMM PF02608"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374902.1"
/db_xref="GI:218249448"
/db_xref="GeneID:7106651"
/translation="MLKKVYYFLIFLFIVACSSSDDGKSEAKTVSLIVDGAFDDKGFN
ESSSKAIRKLKADLNINIIEKASTGNSYLGDIANLEDGNSNLIWGIGFRLSDILFQRA
SENVSVNYAIIEGVYDEIQIPKNLLNISFRSEEVAFLAGYFASKASKTGKIGFVGGVR
GKVLESFMYGYEAGAKYANSNIKVVSQYVGTFGDFGLGRSTASNMYRDGVDIIFAAAG
LSGIGVIEAAKELGPDHYIIGVDQDQSYLAPNNVIVSAVKKVDSLMYSLTKKYLETGV
LDGGKTMFLGLKEDGLGLVLNENLKSNYSEIYNKSLKIGQSIMNGIIKVPYDKVSYDN
FVLQMEN"
misc_feature complement(394840..395844)
/gene="bmpD"
/locus_tag="BbuZS7_0387"
/note="Uncharacterized ABC-type transport system,
periplasmic component/surface lipoprotein [General
function prediction only]; Region: Med; COG1744"
/db_xref="CDD:31930"
misc_feature complement(394963..395760)
/gene="bmpD"
/locus_tag="BbuZS7_0387"
/note="Periplasmic binding domain of basic membrane
lipoprotein, PnrA, in Treponema pallidum and its homologs
from other bacteria and Archaea; Region:
PBP1_BmpA_PnrA_like; cd06354"
/db_xref="CDD:107349"
misc_feature complement(order(395071..395073,395122..395124,
395191..395193,395269..395271,395353..395355,
395503..395505,395713..395715,395737..395742))
/gene="bmpD"
/locus_tag="BbuZS7_0387"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107349"
gene complement(395942..396415)
/gene="rpsG"
/locus_tag="BbuZS7_0388"
/db_xref="GeneID:7106442"
CDS complement(395942..396415)
/gene="rpsG"
/locus_tag="BbuZS7_0388"
/note="binds directly to 16S rRNA where it nucleates
assembly of the head domain of the 30S subunit"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S7"
/protein_id="YP_002374903.1"
/db_xref="GI:218249195"
/db_xref="GeneID:7106442"
/translation="MSRKNKKIKKKVFVDTRYNSRIVAKFANRMMYDGKKSISESILY
SSIDLLADKLEESDKMAVFYKALDNIKPLVEVRSRRVGGATYQVPVEVREERREALAM
KWIIFAARKSSGRSMKEKLSNELLNAYNSTGAAFKKKEDTHRMAEANKAFTHYRW"
misc_feature complement(395945..396415)
/gene="rpsG"
/locus_tag="BbuZS7_0388"
/note="30S ribosomal protein S7; Validated; Region:
PRK05302"
/db_xref="CDD:180003"
gene complement(396440..396814)
/gene="rpsL"
/locus_tag="BbuZS7_0389"
/db_xref="GeneID:7106734"
CDS complement(396440..396814)
/gene="rpsL"
/locus_tag="BbuZS7_0389"
/note="interacts with and stabilizes bases of the 16S rRNA
that are involved in tRNA selection in the A site and with
the mRNA backbone; located at the interface of the 30S and
50S subunits, it traverses the body of the 30S subunit
contacting proteins on the other side; mutations in the
S12 gene confer streptomycin resistance"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S12"
/protein_id="YP_002374904.1"
/db_xref="GI:218249247"
/db_xref="GeneID:7106734"
/translation="MPTINQLIRKPRKSQTEKTASPALQNCPQRRGICTRVMTVTPKK
PNSALRKVARVRLSNGFEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGAK
DTLGVNNRKKGRSKYGTKKPKA"
misc_feature complement(396485..396808)
/gene="rpsL"
/locus_tag="BbuZS7_0389"
/note="S12-like family, 30S ribosomal protein S12
subfamily; S12 is located at the interface of the large
and small ribosomal subunits of prokaryotes, chloroplasts
and mitochondria, where it plays an important role in both
tRNA and ribosomal subunit...; Region: Ribosomal_S12;
cd03368"
/db_xref="CDD:48341"
misc_feature complement(order(396779..396784,396791..396796,
396800..396805))
/gene="rpsL"
/locus_tag="BbuZS7_0389"
/note="S17 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:48341"
misc_feature complement(396803..396805)
/gene="rpsL"
/locus_tag="BbuZS7_0389"
/note="S8 interaction site; other site"
/db_xref="CDD:48341"
misc_feature complement(order(396485..396487,396548..396553,
396563..396568,396605..396610,396617..396619,
396641..396643,396662..396670,396674..396679,
396722..396724,396728..396733,396737..396739,
396773..396781))
/gene="rpsL"
/locus_tag="BbuZS7_0389"
/note="16S rRNA interaction site [nucleotide binding];
other site"
/db_xref="CDD:48341"
misc_feature complement(order(396551..396553,396683..396688))
/gene="rpsL"
/locus_tag="BbuZS7_0389"
/note="streptomycin interaction site [chemical binding];
other site"
/db_xref="CDD:48341"
misc_feature complement(396680..396685)
/gene="rpsL"
/locus_tag="BbuZS7_0389"
/note="23S rRNA interaction site [nucleotide binding];
other site"
/db_xref="CDD:48341"
misc_feature complement(order(396581..396607,396665..396682))
/gene="rpsL"
/locus_tag="BbuZS7_0389"
/note="aminoacyl-tRNA interaction site (A-site)
[nucleotide binding]; other site"
/db_xref="CDD:48341"
gene complement(396882..401015)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/db_xref="GeneID:7106456"
CDS complement(396882..401015)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/EC_number="2.7.7.6"
/note="DNA-dependent RNA polymerase catalyzes the
transcription of DNA into RNA using the four
ribonucleoside triphosphates as substrates. Subunit beta'
binds to sigma factor allowing it to bind to the -10
region of the promoter"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit beta'"
/protein_id="YP_002374905.1"
/db_xref="GI:218249575"
/db_xref="GeneID:7106456"
/translation="MKEIKDFERIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKD
GLFCERIFGTTKEWECYCGKFKSVRYKGIICDRCNVEVTHFKVRRERMGHIELAAPVA
HIWYYKYIPSRIGLLLDITASSLNSILYYEKYVVIEPGDTDLKKMQLLNEDEYIEARE
RYGMSFNASMGAEAIKTLLENLDLDELSSKLRIQMIDKDDKTDKKLLRRLEIIENFKI
SGNKPEWMIMEVLPVIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLRKLLLLNA
PEIIVRNEKRMLQESVDSLFDNSHKRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGK
RVDYSGRSVIVVGPELKLHQCGLPAKMALELFKPFVIRRLIESEAVFNIKRAKNLIEQ
EVDEVWQILDLVIKEHPILLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADF
DGDQMAVHVPLTPAAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLYYLTMEKKN
VIGEGKKFLNFNNVILAINNRSLDYNASIYVKIDGEYKKTTAGRVIFNEALPKGIEFV
NKTLSDLELQILISKVYVVHGSSTVIEMLDIIKELGFRYATKFGCTISMSDIIVPDEK
RTYVERANKEIAKIQNDYAKGVITGEERYNNVVSVWLKTNEELTNKMMEILKKDRDGF
NVIYMMADSGARGSRNQIRQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTN
GARKGLADTALKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVETVKNGEEILESL
KEKAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGIEKLVIRSVLTCEAEHG
VCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHIGGVAQAGSEDDKIS
LKNAFILNGIEGFNVRVDNGILFTRKGTLKIINVFYEEKIKNIKEIKVLDSQRVIKGI
PLFIDKKGSEILSSYIGYVKLRDDNFFIVSEEQEVSLKAGTKLEIEVGDYVESGKVIG
TFDPFAEPIIAEVKGKIKFKDIILGTTLKEEINTETGNVEKRITDNVFESLDPRIFII
DSSGMEVASYVLPGDAYLQVEDGQSINIGDIIAKLSKGSEKTQDITGGLPRVNDLFET
RIPKNLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGDVVKA
GDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKHIGVIIKQMMKKV
KIVAVGDTNFVYGQKVDKHTFYEQNRKVIKQGGEPAIASPILIGVTKTSLNIDSFISA
ASFQETTKVLTDASIAGKIDDLRGLKENVVIGHLIPTGTGMGLYKKIKVSENIDSEV"
misc_feature complement(398568..401015)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="DNA-directed RNA polymerase, beta' subunit/160 kD
subunit [Transcription]; Region: RpoC; COG0086"
/db_xref="CDD:30435"
misc_feature complement(400023..401006)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="RNA polymerase Rpb1, domain 1; Region:
RNA_pol_Rpb1_1; pfam04997"
/db_xref="CDD:147265"
misc_feature complement(399516..400346)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="RNA polymerase I subunit A N-terminus; Region:
RPOLA_N; smart00663"
/db_xref="CDD:197824"
misc_feature complement(399162..399584)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="RNA polymerase Rpb1, domain 3; Region:
RNA_pol_Rpb1_3; pfam04983"
/db_xref="CDD:147253"
misc_feature complement(398835..399077)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="RNA polymerase Rpb1, domain 4; Region:
RNA_pol_Rpb1_4; pfam05000"
/db_xref="CDD:203147"
misc_feature complement(397836..398831)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="RNA polymerase Rpb1, domain 5; Region:
RNA_pol_Rpb1_5; pfam04998"
/db_xref="CDD:147266"
misc_feature complement(<398301..398408)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="Largest subunit of RNA polymerase (RNAP),
C-terminal domain; Region: RNAP_largest_subunit_C;
cl11429"
/db_xref="CDD:142634"
misc_feature complement(398388..398390)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="Rpb1 - Rpb6 interaction site [polypeptide binding];
other site"
/db_xref="CDD:132719"
misc_feature complement(<397476..397676)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="Largest subunit of RNA polymerase (RNAP),
C-terminal domain; Region: RNAP_largest_subunit_C;
cl11429"
/db_xref="CDD:142634"
misc_feature complement(order(397476..397496,397500..397526,
397527..397532,397533..397541,397551..397571,
397575..397610,397623..397661,397662..397667))
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="cleft; other site"
/db_xref="CDD:132719"
misc_feature complement(397662..397664)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="Rpb1 - Rpb6 interaction site [polypeptide binding];
other site"
/db_xref="CDD:132719"
misc_feature complement(order(397482..397484,397527..397529,
397533..397541,397551..397556))
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="Rpb1 - Rpb5 interaction site [polypeptide binding];
other site"
/db_xref="CDD:132719"
misc_feature complement(<397392..397550)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="Apocytochrome F, C-terminal; Region:
Apocytochr_F_C; cl03168"
/db_xref="CDD:213110"
misc_feature complement(396933..>397382)
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="Largest subunit (beta') of Bacterial DNA-dependent
RNA polymerase (RNAP), C-terminal domain; Region:
RNAP_beta'_C; cd02655"
/db_xref="CDD:132721"
misc_feature complement(order(397041..397046,397089..397091))
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:132721"
misc_feature complement(order(396939..396941,396951..396956,
396963..396965,396981..396983,396999..397001))
/gene="rpoC"
/locus_tag="BbuZS7_0390"
/note="Rpb1 (beta') - Rpb2 (beta) interaction site
[polypeptide binding]; other site"
/db_xref="CDD:132721"
gene complement(401031..404498)
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/db_xref="GeneID:7106825"
CDS complement(401031..404498)
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/EC_number="2.7.7.6"
/note="DNA-dependent RNA polymerase catalyzes the
transcription of DNA into RNA using the four
ribonucleoside triphosphates as substrates; beta subunit
is part of the catalytic core which binds with a sigma
factor to produce the holoenzyme"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit beta"
/protein_id="YP_002374906.1"
/db_xref="GI:218249452"
/db_xref="GeneID:7106825"
/translation="MIKRVHLGQGRADEILDLPNLIEIQLNSYEKFLQLDKLKSKKPL
LNEGLESVFRNIFPIKSGNGDVALEYERYYIENDALNFTEKECKRKGQSYEAVLKVRL
NLQFLTTGEIRQKDVYMGTIPLMTERGTFIINGAERVVVSQIHRSPGVVFYKEKDLYS
ARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILITLFLRALGFDTREKIIETFYNIKK
IKVEDGTKRDLPGQYLAKSINIRENMYYRAGDKITLQDVEDFLQNGVNEIELVDFDGY
DDISGKRFVSSNVILNCLEKEDAFFALKDGSKELPKESVMLAVYSSLFPGEPISIDNA
ENDLKTIFFSERRYDLGRVGRYKLSKKFGFDDLTTSVLTMDDIVNTISHLLRIYEGHD
ILDDIDHLGNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPI
VSAVKEFFATSQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDRAGFEVRDVHYTHYG
RMCPIETPEGPNIGLIVSLATYSRVNDYGFLETPYRKVVNGEVTDQLEYLSAIDEEKK
CIAQANAAFNSNGKYLEDLVSVRISGDYTTTSPTNIDYMDVSPRQLISVSSALIPFLE
HNDANRALMGSNMQRQAVPLLFPKPPIVGTGMESVVAKDSGVVVKAKRSGEVILATSS
KIVVKPFEAENAKDLDEYHIVKYERTNQDTCFNQSVLVKEGQKVERGEIIADGPATRY
GELALGNNLLLGVIPWNGFNYEDAILISDRIVKEDLYTSIHIKEFSIEVRETKLGPEK
VTGDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKSEGDITPEFRLLTSIFG
EKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILKVYVAKKRKLKEGDK
MAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQLMESQLGLAGKY
LGESYNVPVFESATNEQIQEKLKTAGFNPTSKEILYDGYTGEPFENEVMVGVIYMLKL
HHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTV
KSDDMSGRVKIYENIVKGVPTNVSGIPESFNVLMQELRGLGLDLSIYDDAGNQVPLTE
KEEELINKS"
misc_feature complement(401076..404492)
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/note="DNA-directed RNA polymerase subunit beta; Reviewed;
Region: rpoB; PRK00405"
/db_xref="CDD:179007"
misc_feature complement(<403794..404438)
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cl04593"
/db_xref="CDD:156170"
misc_feature complement(403281..>403619)
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/note="RNA polymerase Rpb2, domain 2; Region:
RNA_pol_Rpb2_2; pfam04561"
/db_xref="CDD:203048"
misc_feature complement(<402510..>403379)
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cd00653"
/db_xref="CDD:73223"
misc_feature complement(401094..>402287)
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cd00653"
/db_xref="CDD:73223"
misc_feature complement(order(401433..401435,401484..401486,
401577..401579,401583..401588,401667..401669,
401706..401708,402177..402179,402186..402188,
402249..402251,402255..402257))
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/note="RPB10 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature complement(order(401094..401096,401100..401102,
401106..401117,401121..401123,401127..401132,
401136..401138,401142..401144,401154..401156,
401223..401225,401235..401252,401256..401273,
401277..401279,401283..401288,401292..401294,
401304..401312,401373..401378,401382..401390,
401397..401399,401436..401438,401442..401450,
401472..401474,401553..401555,401604..401606,
401616..401618,401631..401633,401640..401642,
401649..401651,401655..401657,401721..401723,
401727..401729,401733..401735,402210..402218,
402222..402224,402231..402242))
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/note="RPB1 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature complement(order(401466..401468,401709..401711,
402180..402182,402222..402224))
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/note="RPB11 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature complement(order(401442..401444,401448..401471,
401682..401687,401691..401693,401700..401708,
401781..401783,401787..401789,402165..402167,
402177..402182))
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/note="RPB3 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature complement(order(402024..402026,402030..402038,
402048..402050,402054..402056,402165..402167))
/gene="rpoB"
/locus_tag="BbuZS7_0391"
/note="RPB12 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
gene complement(404581..404955)
/gene="rplL"
/locus_tag="BbuZS7_0392"
/db_xref="GeneID:7106446"
CDS complement(404581..404955)
/gene="rplL"
/locus_tag="BbuZS7_0392"
/note="present in two forms; L12 is normal, while L7 is
aminoacylated at the N-terminal serine; the only multicopy
ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two
L12 dimers bind L10; critically important for translation
efficiency and fidelity; stimulates GTPase activity of
translation factors"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L7/L12"
/protein_id="YP_002374907.1"
/db_xref="GI:218249764"
/db_xref="GeneID:7106446"
/translation="MALNKEDILTWLEGAKTMEVVDLVTAIEEKFGVTAAVAAGVGGA
VSAGSADSEEQTEFDVILMSFGDSKINVIKEVRAITGLGLGEAKALVEAAPKAIKEGL
SKSDAEELKKKLEAVGAKVEVK"
misc_feature complement(404587..404949)
/gene="rplL"
/locus_tag="BbuZS7_0392"
/note="Ribosomal protein L7/L12. Ribosomal protein L7/L12
refers to the large ribosomal subunit proteins L7 and L12,
which are identical except that L7 is acetylated at the N
terminus. It is a component of the L7/L12 stalk, which is
located at the surface of...; Region: Ribosomal_L7_L12;
cd00387"
/db_xref="CDD:100102"
misc_feature complement(order(404638..404640,404647..404649,
404653..404658,404698..404703,404707..404709,
404713..404718,404722..404724,404785..404790,
404806..404811,404815..404820,404827..404829,
404872..404874,404881..404883,404890..404895,
404902..404910,404947..404949))
/gene="rplL"
/locus_tag="BbuZS7_0392"
/note="core dimer interface [polypeptide binding]; other
site"
/db_xref="CDD:100102"
misc_feature complement(order(404863..404865,404878..404880,
404917..404919,404929..404931,404938..404940))
/gene="rplL"
/locus_tag="BbuZS7_0392"
/note="peripheral dimer interface [polypeptide binding];
other site"
/db_xref="CDD:100102"
misc_feature complement(order(404863..404865,404872..404874,
404884..404889,404896..404898))
/gene="rplL"
/locus_tag="BbuZS7_0392"
/note="L10 interface [polypeptide binding]; other site"
/db_xref="CDD:100102"
misc_feature complement(order(404692..404694,404701..404706,
404725..404727,404734..404739,404746..404751))
/gene="rplL"
/locus_tag="BbuZS7_0392"
/note="L11 interface [polypeptide binding]; other site"
/db_xref="CDD:100102"
misc_feature complement(order(404692..404694,404701..404706,
404725..404727,404734..404736,404746..404748))
/gene="rplL"
/locus_tag="BbuZS7_0392"
/note="putative EF-Tu interaction site [polypeptide
binding]; other site"
/db_xref="CDD:100102"
misc_feature complement(order(404725..404727,404734..404739,
404746..404748))
/gene="rplL"
/locus_tag="BbuZS7_0392"
/note="putative EF-G interaction site [polypeptide
binding]; other site"
/db_xref="CDD:100102"
gene complement(405026..405514)
/gene="rplJ"
/locus_tag="BbuZS7_0393"
/db_xref="GeneID:7106937"
CDS complement(405026..405514)
/gene="rplJ"
/locus_tag="BbuZS7_0393"
/note="binds the two ribosomal protein L7/L12 dimers and
anchors them to the large ribosomal subunit"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L10"
/protein_id="YP_002374908.1"
/db_xref="GI:218249751"
/db_xref="GeneID:7106937"
/translation="MSAKINAKKLEMFDLLKQFIDSKQNLFFLDYRGLNVAQLTELRN
KIEGEHGSLKVVKNNIMKMVLKEKNINVVDSCLVGPTVVVTALEEANVIAKIFYDFVK
SSTLKVKGGFVLGEFYDEAKVQAYSKLPTKKESISLFASVLKAPVSKLARTLKALADV
KN"
misc_feature complement(405038..405502)
/gene="rplJ"
/locus_tag="BbuZS7_0393"
/note="Ribosomal protein L10 family, L10 subfamily;
composed of bacterial 50S ribosomal protein and eukaryotic
mitochondrial 39S ribosomal protein, L10. L10 occupies the
L7/L12 stalk of the ribosome. The N-terminal domain (NTD)
of L10 interacts with L11 protein...; Region:
Ribosomal_L10; cd05797"
/db_xref="CDD:88597"
misc_feature complement(order(405326..405328,405335..405346,
405476..405478,405485..405490))
/gene="rplJ"
/locus_tag="BbuZS7_0393"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88597"
misc_feature complement(order(405041..405046,405050..405055,
405062..405070,405074..405091,405095..405100,
405107..405112,405119..405121,405167..405169,
405176..405178,405242..405244))
/gene="rplJ"
/locus_tag="BbuZS7_0393"
/note="Interface with L7/L12 ribosomal proteins
[polypeptide binding]; other site"
/db_xref="CDD:88597"
gene complement(405519..406199)
/gene="rplA"
/locus_tag="BbuZS7_0394"
/db_xref="GeneID:7106924"
CDS complement(405519..406199)
/gene="rplA"
/locus_tag="BbuZS7_0394"
/note="in Escherichia coli and Methanococcus, this protein
autoregulates expression; the binding site in the mRNA
mimics the binding site in the 23S rRNA"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L1"
/protein_id="YP_002374909.1"
/db_xref="GI:218249653"
/db_xref="GeneID:7106924"
/translation="MSKKGKKYIEAFSKVDKNKFYNIEDAILLLKEIKFAKFDETIDI
SINLNLKKNHTVRDTIVLPNQFMKPKRILVFAKGDRADEARAFGATHVGDDDLINKIK
SGWDEFDVVVATPDMMKDVGRLGPILGKRGLMPNPKTQTVTNNLKDAINSLKKGRTEF
RANKNGVISFSFGKSSMDNEKIKENYEEFVKEVVKKRPSDLKGAFIDSIYISSTMGPS
IKVNFVWR"
misc_feature complement(405537..406133)
/gene="rplA"
/locus_tag="BbuZS7_0394"
/note="Ribosomal protein L1. The L1 protein, located near
the E-site of the ribosome, forms part of the L1 stalk
along with 23S rRNA. In bacteria and archaea, L1
functions both as a ribosomal protein that binds rRNA, and
as a translation repressor that binds...; Region:
Ribosomal_L1; cd00403"
/db_xref="CDD:88601"
misc_feature complement(order(405546..405548,405552..405557,
405693..405695,405699..405701,405705..405707,
406059..406061,406065..406067,406071..406073,
406077..406079,406086..406094))
/gene="rplA"
/locus_tag="BbuZS7_0394"
/note="mRNA/rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88601"
gene complement(406199..406630)
/gene="rplK"
/locus_tag="BbuZS7_0395"
/db_xref="GeneID:7106113"
CDS complement(406199..406630)
/gene="rplK"
/locus_tag="BbuZS7_0395"
/note="binds directly to 23S ribosomal RNA"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L11"
/protein_id="YP_002374910.1"
/db_xref="GI:218249360"
/db_xref="GeneID:7106113"
/translation="MAKKKAISWIKLQVPAAQAAPGAKIGQALGPHGVSGPQFVKEFN
ERTAKMDPGIVVPVIITVYSDKSFSFIVKTPPASILIKKAIGIESGSKKSNTDKVGTI
SKEKLMEIARIKMSDLNAKSESAAFKIIAGSARSMGVEVEK"
misc_feature complement(406205..406627)
/gene="rplK"
/locus_tag="BbuZS7_0395"
/note="50S ribosomal protein L11; Validated; Region: rplK;
PRK00140"
/db_xref="CDD:178895"
misc_feature complement(406208..406603)
/gene="rplK"
/locus_tag="BbuZS7_0395"
/note="Ribosomal protein L11. Ribosomal protein L11,
together with proteins L10 and L7/L12, and 23S rRNA, form
the L7/L12 stalk on the surface of the large subunit of
the ribosome. The homologous eukaryotic cytoplasmic
protein is also called 60S ribosomal...; Region:
Ribosomal_L11; cd00349"
/db_xref="CDD:100101"
misc_feature complement(order(406220..406228,406232..406237,
406244..406249,406256..406258,406268..406276,
406289..406291,406364..406366,406385..406387,
406397..406405,406538..406540,406598..406600))
/gene="rplK"
/locus_tag="BbuZS7_0395"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:100101"
misc_feature complement(order(406271..406276,406283..406288,
406418..406423,406427..406429,406439..406450,
406454..406456,406598..406600))
/gene="rplK"
/locus_tag="BbuZS7_0395"
/note="L7/L12 interface [polypeptide binding]; other site"
/db_xref="CDD:100101"
misc_feature complement(order(406538..406540,406550..406552))
/gene="rplK"
/locus_tag="BbuZS7_0395"
/note="putative thiostrepton binding site; other site"
/db_xref="CDD:100101"
misc_feature complement(order(406337..406339,406346..406348))
/gene="rplK"
/locus_tag="BbuZS7_0395"
/note="L25 interface [polypeptide binding]; other site"
/db_xref="CDD:100101"
gene complement(406682..407236)
/gene="nusG"
/locus_tag="BbuZS7_0396"
/db_xref="GeneID:7106657"
CDS complement(406682..407236)
/gene="nusG"
/locus_tag="BbuZS7_0396"
/note="identified by match to protein family HMM PF00467;
match to protein family HMM PF02357; match to protein
family HMM TIGR00922"
/codon_start=1
/transl_table=11
/product="transcription termination/antitermination factor
NusG"
/protein_id="YP_002374911.1"
/db_xref="GI:218249824"
/db_xref="GeneID:7106657"
/translation="MSRAWYVVQTYSQYEKKIEQDIRLLINEGVFGGVVLDVKAPIEK
VEEIRNGKKRIRERKIWPGYILIELDLPEVGWKDIIANIIKVQGVINFVGVSKGQRPI
PINDEEVKSVFMLTGEIKANKSIFMLYDFEEGERVRIKGGPFDSFEGLISSIDYERKK
LKVAVQIFGRSTPVEVDFQHIEKI"
misc_feature complement(406688..407224)
/gene="nusG"
/locus_tag="BbuZS7_0396"
/note="transcription termination/antitermination factor
NusG; Region: nusG; TIGR00922"
/db_xref="CDD:162110"
misc_feature complement(406898..407224)
/gene="nusG"
/locus_tag="BbuZS7_0396"
/note="Bacterial N-Utilization Substance G (NusG)
N-terminal (NGN) domain, subgroup 1; Region: NGN_Bact_1;
cd09891"
/db_xref="CDD:193580"
misc_feature complement(order(406901..406903,406925..406927,
407039..407041,407045..407047,407054..407056,
407114..407116,407216..407218))
/gene="nusG"
/locus_tag="BbuZS7_0396"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:193580"
misc_feature complement(406766..406849)
/gene="nusG"
/locus_tag="BbuZS7_0396"
/note="KOW motif; Region: KOW; cl00354"
/db_xref="CDD:199293"
gene complement(407454..407531)
/locus_tag="BbuZS7_0397"
/db_xref="GeneID:7106204"
tRNA complement(407454..407531)
/locus_tag="BbuZS7_0397"
/product="tRNA-Trp"
/db_xref="GeneID:7106204"
gene complement(407539..407718)
/gene="rpmG"
/locus_tag="BbuZS7_0398"
/db_xref="GeneID:7106291"
CDS complement(407539..407718)
/gene="rpmG"
/locus_tag="BbuZS7_0398"
/note="in Escherichia coli BM108, a mutation that results
in lack of L33 synthesis had no effect on ribosome
synthesis or function; there are paralogous genes in
several bacterial genomes, and a CXXC motif for zinc
binding and an upstream regulation region of the paralog
lacking this motif that are regulated by zinc similar to
other ribosomal proteins like L31; the proteins in this
group lack the CXXC motif"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L33"
/protein_id="YP_002374912.1"
/db_xref="GI:218249230"
/db_xref="GeneID:7106291"
/translation="MGKKKGKGAVELISLICEETGIRNYTTTKNRRNKQEKLELMKYC
PKLRKHTLHKEGKIK"
misc_feature complement(407548..407706)
/gene="rpmG"
/locus_tag="BbuZS7_0398"
/note="50S ribosomal protein L33; Validated; Region: rpmG;
PRK00595"
/db_xref="CDD:179075"
gene complement(407743..407818)
/locus_tag="BbuZS7_0399"
/db_xref="GeneID:7106771"
tRNA complement(407743..407818)
/locus_tag="BbuZS7_0399"
/product="tRNA-Thr"
/db_xref="GeneID:7106771"
gene complement(407892..408740)
/locus_tag="BbuZS7_0400"
/db_xref="GeneID:7106303"
CDS complement(407892..408740)
/locus_tag="BbuZS7_0400"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374913.1"
/db_xref="GI:218249789"
/db_xref="GeneID:7106303"
/translation="MHFLKFLFSYLFLLYSNVSIIKDEAAETSVHRIIDWDRKVICFD
IVKEINENEFRPVGLNTASKLIATINDFKDTLIRESLFKIIMDSENTFKNYFDLNPSL
ILNFSGPNSILKRSYIKYSEDLRSLTVRYELSLFPDFINLFFSHETPYKAFYPLVNSD
IDKTDYTGIVIYVGEVYNNTSGSKKLEDSFFIKIYDENIRPYFDKRMVSSEALKKWGM
LEYSNDVLYNNKNRVGHRPLKLVAKSIYGKNNTDIILDEYSINKLFSNSNNIKLLQDG
KLVVIK"
gene complement(408754..409785)
/locus_tag="BbuZS7_0401"
/db_xref="GeneID:7106166"
CDS complement(408754..409785)
/locus_tag="BbuZS7_0401"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_002374914.1"
/db_xref="GI:218249838"
/db_xref="GeneID:7106166"
/translation="MNLLVKIAKFILILFLFTSCNQKQSEIQNLTHLLKSSNKNRLDK
FLIIDRVVNIYIANKNYEDALEIVNNGIIDDESREYYPLYLYLMGNIYDSMGEDFVAF
NIYKRVVDNFDDYVYENHSMKTRVAKKIVNLNIDSIDKINYYKFILNMGIDNLNNEEK
GNYFYNLALSLEDVQDYDESYFYYKKFLSIPRAHLKIDSRDYFNVVTKINYFNNPEFV
VYRNLGDLIQDVKNFVLSGNTSKLLNIRDKNNFFIQSWDQKGGKSNSINTNSFLTTMI
RLGGRRKNGIQFAKHLEADSSDDISYLESRGWDHIHEWYFVFKRIVYPKDPEINNGWT
WIGVYLGKK"
gene 410143..410784
/locus_tag="BbuZS7_0402"
/db_xref="GeneID:7106218"
CDS 410143..410784
/locus_tag="BbuZS7_0402"
/note="identified by match to protein family HMM PF00023"
/codon_start=1
/transl_table=11
/product="ankyrin"
/protein_id="YP_002374915.1"
/db_xref="GI:218249607"
/db_xref="GeneID:7106218"
/translation="MLLLLLQTIMNLNSINTNISTSIVKELQKNLYVFNSKEYQKDKD
TLNEFINSININDKEILQSLEKIKNELFIISVFFNNKKGILIALNLGAEINFKYKISP
ISISIINNEFEITKILIDYGISLNQIDDTGYSPIFWAIYTNNEKIFEFLKESGADLSF
TLKNRKTPMQAAIETENIKLIKSLEKKKIYIDDNFKKELKKLKNKEIVRILVK"
misc_feature 410356..410619
/locus_tag="BbuZS7_0402"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:205076"
misc_feature 410362..410673
/locus_tag="BbuZS7_0402"
/note="ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can range
from 2 to over 20 (ankyrins, for example). ANK repeats may
occur in combinations with other...; Region: ANK; cd00204"
/db_xref="CDD:29261"
gene complement(410794..412344)
/locus_tag="BbuZS7_0403"
/note="conserved hypothetical protein; this gene contains
a frame shift which may be the result of sequencing error"
/pseudo
/db_xref="GeneID:7106859"
gene 412451..413653
/locus_tag="BbuZS7_0404"
/db_xref="GeneID:7106871"
CDS 412451..413653
/locus_tag="BbuZS7_0404"
/codon_start=1
/transl_table=11
/product="glutamate transporter"
/protein_id="YP_002374916.1"
/db_xref="GI:218249368"
/db_xref="GeneID:7106871"
/translation="MNIKINFFFTLPIGIFLGLFFPLGIYSSLSHAFIRLSYLSLIPF
LIFSIPLGIENIIENKNFKKLFGKTIYYGILTNLSGVAVSIIAATIYLPQRIPILEKT
IQNTCFFEKEALLETFFPKNIFKIFTSSNPNLLSIYMISIIIGTSFYYAKQKGRIARE
LMLSASNLFYHANGFIVNILNIGIIFITANYAANLKNFKDYPNYTNSITFFLAWTIII
LFVILPTISYRLTKSFKMIYKGIFVSFQNIIFSGLAKDSYSPYVILIEDIKNERINIK
KSIIINIPLINFVSKFGTIFVSVISFFIILKSYSSLPISIYEISYMSTLSFVFVFAFP
HIPNSLIYIITMLCSTYTKGIELNVSNITPMLPILISLALLIDFAFNIAIIHIINFKE
LKDQEKIN"
misc_feature 412451..413575
/locus_tag="BbuZS7_0404"
/note="Na+/H+-dicarboxylate symporters [Energy production
and conversion]; Region: GltP; COG1301"
/db_xref="CDD:31492"
misc_feature 412487..>412957
/locus_tag="BbuZS7_0404"
/note="Sodium:dicarboxylate symporter family; Region: SDF;
cl00573"
/db_xref="CDD:207114"
gene complement(413665..415131)
/gene="proS"
/locus_tag="BbuZS7_0405"
/db_xref="GeneID:7106665"
CDS complement(413665..415131)
/gene="proS"
/locus_tag="BbuZS7_0405"
/EC_number="6.1.1.15"
/note="catalyzes the formation of prolyl-tRNA(Pro) from
proline and tRNA(Pro)"
/codon_start=1
/transl_table=11
/product="prolyl-tRNA synthetase"
/protein_id="YP_002374917.1"
/db_xref="GI:218249438"
/db_xref="GeneID:7106665"
/translation="MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVIMPYGYSI
WSKIQSILDKKFKETGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAE
PLVLRPTSETIIWNMYSKWIKSYRDLPLKINQWANVVRWEKRTRPFLRTTEFLWQEGH
TAHATEEEALEETLLILDVYKRFIEDYLAIPVFCGKKSEKEKFAGAVSTYSIEALMQD
KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRHVFASSWGVSTRLIGALIMVHSDEKG
LVLPPRIAPIEIIVIPIFKKEDEINKKILDYCDCVVDALKKAGFRVEIDKDVRSSPGF
RFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQISLDSLVSKVKVELDLMQ
KDLFQRALNFRILNTKEIFRSSKDSYETFKAYVNDYSGFVLSCWCGSLNCENIIKNET
KATIRCIPDDFKARDLTGMTCIYCSSKAKYFVLFAKSY"
misc_feature complement(413668..415131)
/gene="proS"
/locus_tag="BbuZS7_0405"
/note="prolyl-tRNA synthetase; Provisional; Region:
PRK08661"
/db_xref="CDD:181528"
misc_feature complement(414322..415101)
/gene="proS"
/locus_tag="BbuZS7_0405"
/note="Prolyl-tRNA synthetase (ProRS) class II core
catalytic domain. ProRS is a homodimer. It is responsible
for the attachment of proline to the 3' OH group of ribose
of the appropriate tRNA. This domain is primarily
responsible for ATP-dependent formation of...; Region:
ProRS_core_arch_euk; cd00778"
/db_xref="CDD:29823"
misc_feature complement(order(414673..414675,414721..414723,
414781..414783,414847..414861,414865..414867,
414928..414933,414937..414945,414994..414996,
415015..415026,415048..415053))
/gene="proS"
/locus_tag="BbuZS7_0405"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29823"
misc_feature complement(414928..414951)
/gene="proS"
/locus_tag="BbuZS7_0405"
/note="motif 1; other site"
/db_xref="CDD:29823"
misc_feature complement(order(414346..414348,414352..414354,
414358..414366,414448..414450,414454..414459,
414463..414465,414658..414660,414664..414666,
414670..414672,414679..414687,414706..414708,
414712..414714,414799..414801,414805..414807))
/gene="proS"
/locus_tag="BbuZS7_0405"
/note="active site"
/db_xref="CDD:29823"
misc_feature complement(414706..414717)
/gene="proS"
/locus_tag="BbuZS7_0405"
/note="motif 2; other site"
/db_xref="CDD:29823"
misc_feature complement(414346..414360)
/gene="proS"
/locus_tag="BbuZS7_0405"
/note="motif 3; other site"
/db_xref="CDD:29823"
misc_feature complement(413668..414306)
/gene="proS"
/locus_tag="BbuZS7_0405"
/note="ProRS Prolyl-anticodon binding domain, long version
found predominantly in eukaryotes and archaea. ProRS
belongs to class II aminoacyl-tRNA synthetases (aaRS).
This alignment contains the anticodon binding domain,
which is responsible for specificity in...; Region:
ProRS_anticodon_zinc; cd00862"
/db_xref="CDD:29802"
misc_feature complement(order(414043..414045,414049..414051,
414079..414081,414103..414105,414121..414123,
414250..414255))
/gene="proS"
/locus_tag="BbuZS7_0405"
/note="anticodon binding site; other site"
/db_xref="CDD:29802"
misc_feature complement(order(413710..413712,413719..413721,
413806..413808,413821..413823))
/gene="proS"
/locus_tag="BbuZS7_0405"
/note="zinc-binding site [ion binding]; other site"
/db_xref="CDD:29802"
gene complement(415184..415816)
/locus_tag="BbuZS7_0406"
/db_xref="GeneID:7106432"
CDS complement(415184..415816)
/locus_tag="BbuZS7_0406"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374918.1"
/db_xref="GI:218249742"
/db_xref="GeneID:7106432"
/translation="MGFPENIFFKNLGFSNNDRYFMFGEYGFENGYYYSAAYFVDVVK
NNFANSGVHSKTFKEHIGYSDSYDKSLYELLKMINFKVKEFKINHLRRGREIYFYVKS
EIPETDFLNFVDFKTGNEYQVFVNKDINSQELSSSFNIFLSVRYCNSTLEKHLTVGRG
NYYRKNVIDYRIREIVLFPNEDGIVFVLEKIMLNSYGNRYKRFMVEVKKY"
misc_feature complement(415187..415810)
/locus_tag="BbuZS7_0406"
/note="Predicted secreted protein [Function unknown];
Region: COG5497"
/db_xref="CDD:35056"
gene 416027..416443
/locus_tag="BbuZS7_0407"
/db_xref="GeneID:7106915"
CDS 416027..416443
/locus_tag="BbuZS7_0407"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374919.1"
/db_xref="GI:218249624"
/db_xref="GeneID:7106915"
/translation="MKKRINGLKLASKSLRQIKFFCHSFIIKHCKKTYLLQIHKFIFF
SKAKKSKQKYLPKNPLQTNKININIQSSSIIIAVFVIKNFLITKTLINKAIKNSTIKF
CYQNKQININIFNFLCFIKNIVKIISKIENKKGEFQ"
gene 416440..417051
/locus_tag="BbuZS7_0408"
/db_xref="GeneID:7106083"
CDS 416440..417051
/locus_tag="BbuZS7_0408"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374920.1"
/db_xref="GI:218249933"
/db_xref="GeneID:7106083"
/translation="MRMLLATIILILTTGLLAAQSKSKSMTEDDFDFDKLLAKEESVR
RLFGIGFGVGYPLANITISVPYVDIDLGYGGFVGLKPNNFLPYVVMGVDLLFKDEIHK
NTMISGGIGIGADWSKGSPEKSNEKLEEEEENEAQQVASLQNRIGVVIRLPLVIEYSF
LKNIVIGFKAVATIGTTMLLGSPMSFEGARFNFLGTGFIKIYI"
misc_feature 416548..417042
/locus_tag="BbuZS7_0408"
/note="Protein of unknown function (DUF3996); Region:
DUF3996; pfam13161"
/db_xref="CDD:205342"
gene 417062..417673
/locus_tag="BbuZS7_0409"
/db_xref="GeneID:7106239"
CDS 417062..417673
/locus_tag="BbuZS7_0409"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374921.1"
/db_xref="GI:218249942"
/db_xref="GeneID:7106239"
/translation="MIKIFKKIYILTLVLGMAHLSFASDNYMVRCSKEEDSTTCIAKL
KEIKEKKNYDLFSMGIGIGDPIANIMITIPYINIDFGYGGFIGLKSNNFENYLNGGID
VIFKKQIGQYMKIGGGIGIGADWSKTSLIPPNEEEETDYERIGAVIRIPFIMEYNFAK
NLSLGFKIYPAVGPTILLTKPSILFEGIKFNFFGFGFIKFAFN"
misc_feature 417194..417607
/locus_tag="BbuZS7_0409"
/note="Protein of unknown function (DUF3996); Region:
DUF3996; pfam13161"
/db_xref="CDD:205342"
gene complement(417726..418844)
/gene="manA"
/locus_tag="BbuZS7_0410"
/db_xref="GeneID:7106248"
CDS complement(417726..418844)
/gene="manA"
/locus_tag="BbuZS7_0410"
/EC_number="5.3.1.8"
/note="identified by match to protein family HMM PF01238;
match to protein family HMM TIGR00218"
/codon_start=1
/transl_table=11
/product="mannose-6-phosphate isomerase, class I"
/protein_id="YP_002374922.1"
/db_xref="GI:218249894"
/db_xref="GeneID:7106248"
/translation="MNNEDNIFLMKNNIKEYDWGGINFIPNLLGDKIDGKPKAEMWLG
AHKTFSSKILYKNEYVLLSDFLEDHKELLGCNDEFPFLLKVLSANKPLSIQIHPSKDI
ALKGYESENNKGIDINDPKRTYKDKNPKIELIYALSDFYALKGFLPLDEIKKIYEILE
LNFDFQSHKDFVKTIFDLQMYELEKIIEKILKNLDLIDNFRGYWFNEIYNIYGIDVGL
LVFLGMNILKLKPGEVVYTNSQEVHAYLKGDCIELMTNSDNVIRAGLTTKYIDKDEML
RVGQFEEGKLSFLNPDFQDNFSVFRLPNTNLKLIQKKINENICINRNSAMVLLVLNGC
VSINKSLNLKKGESIFIGKKAENLFIDGDGEAFIAGFN"
misc_feature complement(417735..418835)
/gene="manA"
/locus_tag="BbuZS7_0410"
/note="mannose-6-phosphate isomerase, class I; Region:
manA; TIGR00218"
/db_xref="CDD:200004"
misc_feature complement(417738..418832)
/gene="manA"
/locus_tag="BbuZS7_0410"
/note="Phosphomannose isomerase [Carbohydrate transport
and metabolism]; Region: ManA; COG1482"
/db_xref="CDD:31671"
gene complement(418841..420718)
/locus_tag="BbuZS7_0411"
/db_xref="GeneID:7106353"
CDS complement(418841..420718)
/locus_tag="BbuZS7_0411"
/note="identified by match to protein family HMM PF00359;
match to protein family HMM PF02378; match to protein
family HMM PF02379; match to protein family HMM TIGR00829;
match to protein family HMM TIGR00848; match to protein
family HMM TIGR01427"
/codon_start=1
/transl_table=11
/product="PTS system subunit IIABC"
/protein_id="YP_002374923.1"
/db_xref="GI:218249424"
/db_xref="GeneID:7106353"
/translation="MFFNFLKKDLVFVLPEVNSKEDVIDFLIEKINDKGYIDNKKEFL
QGILDREKIGDTSWENGVAIPHFIGDVVKTSFISLLYIKGSGVKWSEENPPVNLIFLI
CMSKKQQGNEHLKAIAFIAKLFEDDAFQNALRGFVTTDDIYYYIENVQRKAKEEVFGA
TKAEKIVAVTACPVGVAHTYIAAKKIENEAKKQGYSIRVETQGSIGIENALTEEEIKN
ASVVILAVDKDIDEKRFEGKRVYKVSTVKAINNTENIIKESFNAPVFKSKDSGTNSDT
KASVATGKGSFYKYLMSGVSPMIPVVASGGILIALSIAFVGIGPDGPNFAEHPFYKQI
ADIGSIAFGMMLPVLAGFIAMAIADKPGLTPGLVGGVMSGNVKAGFLGAIFAGFLAGY
VARFLARRSVPEWLRPVMPIFVIPLISTIIVGFFMLYFGVYIGKFMGVLESGLKSLQS
NSETFGVLGKIFLGLVLGSMITVDMGGPFNKVAFLFGVGLIPQVPEIMGMVAAAIPVP
PMAMGLATFLAPKLFENEEKESGKIAFLISFIGISEGAIPFAASDPGRVIPSIVVGGA
VSSIIAAFLGVANHAPHGGPIVLPVIDNKFGFIIAIAVGVAVATALVIFLKSLKLKES
E"
misc_feature complement(420281..420703)
/locus_tag="BbuZS7_0411"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cd00211"
/db_xref="CDD:29266"
misc_feature complement(418964..420697)
/locus_tag="BbuZS7_0411"
/note="PTS system 2-O-a-mannosyl-D-glycerate specific
transporter subunit IIABC; Provisional; Region: PRK09765"
/db_xref="CDD:182066"
misc_feature complement(order(420521..420523,420569..420571))
/locus_tag="BbuZS7_0411"
/note="active site"
/db_xref="CDD:29266"
misc_feature complement(420521..420523)
/locus_tag="BbuZS7_0411"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29266"
misc_feature complement(419936..420223)
/locus_tag="BbuZS7_0411"
/note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of
the fructose-specific phosphoenolpyruvate:carbohydrate
phosphotransferase system (PTS). In this system, EII (also
referred to as FruAB) is a fructose-specific permease made
up of two proteins (FruA and...; Region: PTS_IIB_fructose;
cd05569"
/db_xref="CDD:99911"
misc_feature complement(order(420182..420190,420194..420205))
/locus_tag="BbuZS7_0411"
/note="P-loop; other site"
/db_xref="CDD:99911"
misc_feature complement(order(420182..420187,420194..420199,
420203..420205))
/locus_tag="BbuZS7_0411"
/note="active site"
/db_xref="CDD:99911"
misc_feature complement(420203..420205)
/locus_tag="BbuZS7_0411"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99911"
misc_feature complement(418925..419860)
/locus_tag="BbuZS7_0411"
/note="Phosphotransferase system, fructose-specific IIC
component [Carbohydrate transport and metabolism]; Region:
FruA; COG1299"
/db_xref="CDD:31490"
gene 420892..421521
/locus_tag="BbuZS7_0412"
/db_xref="GeneID:7106418"
CDS 420892..421521
/locus_tag="BbuZS7_0412"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374924.1"
/db_xref="GI:218249304"
/db_xref="GeneID:7106418"
/translation="MKKTPNTCIFLTLLIISNLNALANEEGNTNEKNDQPKQISNFFS
PERGFIYSTGIGIGVGFFLNSNIKHLIFRPYYTFSNNTFDFLIVAMILTRESLNIPKK
MQYFKSYIGGGINWHIANLIKKTKYFSATIGIGGRFYLSTNFIEDIRFYEKLPYVIEP
YMFIEISSKKAIPLMGLDFKIDFLFLDTFNISFNFTIRYNFKDKNEMET"
gene 421518..422399
/locus_tag="BbuZS7_0413"
/db_xref="GeneID:7106514"
CDS 421518..422399
/locus_tag="BbuZS7_0413"
/note="identified by match to protein family HMM PF01223"
/codon_start=1
/transl_table=11
/product="DNA/RNA non-specific endonuclease"
/protein_id="YP_002374925.1"
/db_xref="GI:218249618"
/db_xref="GeneID:7106514"
/translation="MKKRSKFFLYCYILCLTGFLFFSLNPKALKQIKHKIYDYLEIIE
NKYTDITKSIPIKEAQLIPKGYLTTQIISKKHYTLGYAESARQSEWTAYPLKREMVEL
ALTLLKSKKIKRSTKFFEDTNIKGAFPKLEDYFKSGYDRGHIVSSADMSFSENAMKDT
YFLSNMSPQKSEFNSGIWLKLEKLVREWAISKGYIYIISAGILTENKGFIGKNKILIP
KNFYKIVLAINNNNYYDIISFIIPNEKAKDLDLENYVVSVDLIEKKTKIDFFEKLDSK
IKKNIKKIKNTHSWKFK"
misc_feature 421692..422339
/locus_tag="BbuZS7_0413"
/note="DNA/RNA non-specific endonuclease; prokaryotic and
eukaryotic double- and single-stranded DNA and RNA
endonucleases also present in phosphodiesterases. They
exists as monomers and homodimers; Region: NUC; cd00091"
/db_xref="CDD:28975"
misc_feature 421737..422339
/locus_tag="BbuZS7_0413"
/note="DNA/RNA non-specific endonuclease; Region:
Endonuclease_NS; smart00892"
/db_xref="CDD:197960"
misc_feature order(421935..421940,421944..421946,422037..422039,
422061..422063,422073..422075)
/locus_tag="BbuZS7_0413"
/note="active site"
/db_xref="CDD:28975"
misc_feature order(421935..421940,422073..422075)
/locus_tag="BbuZS7_0413"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:28975"
misc_feature 422037..422039
/locus_tag="BbuZS7_0413"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28975"
gene 422396..423175
/locus_tag="BbuZS7_0414"
/db_xref="GeneID:7106077"
CDS 422396..423175
/locus_tag="BbuZS7_0414"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374926.1"
/db_xref="GI:218249392"
/db_xref="GeneID:7106077"
/translation="MKSIFAKLNASINLFLFIIFILATIVILTFSYKIKYNENYQNYI
LEIYNNNFIILVNKLTIFIAGIIGSLWSYINYKRTNNIQFIFFYCFISSYTLDPILIS
EDFFLKNNLNSSYYLFTKFILFVNTFSLLNLFFLSLYICDFKIKSIHYTIYIILIFAC
IYSYTMPINSYENSQNHGILKIENTKFYIDAFLLLILTNFIVAFLRKKSFDYFFLFVS
MLLILSGIYLNLLKMPYAFLPISIGIPIYLKKSGKIFFYWL"
gene complement(423163..423783)
/locus_tag="BbuZS7_0415"
/db_xref="GeneID:7106690"
CDS complement(423163..423783)
/locus_tag="BbuZS7_0415"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374927.1"
/db_xref="GI:218249738"
/db_xref="GeneID:7106690"
/translation="MFDEFKRTILREDIKYEIFRKFFHIFSLIVLVFYRINFWIGLFS
NILFMILYLSSEIFRITEKKILFFKNISNIILKSRKILPNKVSFSPVFLFLGILISYC
LSMHPFNYIGIFSVCLGDGFASLIGKLIPSFKLVNGKTISGSLVVFCVTFFSYYYFFP
YLTVALILGILAVLVELFDAANYDNLFLPLVVSASSYFLTSFFYSQ"
misc_feature complement(423184..423783)
/locus_tag="BbuZS7_0415"
/note="Dolichol kinase [Lipid metabolism]; Region: SEC59;
COG0170"
/db_xref="CDD:30519"
gene 424034..424891
/locus_tag="BbuZS7_0416"
/db_xref="GeneID:7106911"
CDS 424034..424891
/locus_tag="BbuZS7_0416"
/note="identified by match to protein family HMM PF01739;
match to protein family HMM PF03705"
/codon_start=1
/transl_table=11
/product="chemotaxis protein methyltransferase"
/protein_id="YP_002374928.1"
/db_xref="GI:218249621"
/db_xref="GeneID:7106911"
/translation="MLEIEDKLFLKFCDFIYNNSGIRFDEKNKFVLQSRVNDAVRALA
LENPSQLYNLIISEKLKKEYFLDLVTTNLTRFFRNSLHFQTFEKFVIPNLINIKNIEK
KNRIIIWSAGCSTGEEPYSLAFVLKSKLPKEIDFVIIASDLSLKSLMIAKEGYYSSNK
CENIPKEYRHYIYSHSNGYKIKNEIKNHIRFDYHNLNFESNFSEIDVVFCRNVLIYFD
EKSKIKVLKKFYNNMSKNSYLFIGHSESLFGLNLPFKFLKTPWAIIYEKKDTGCQKEK
FKSQNKYKL"
misc_feature 424046..424210
/locus_tag="BbuZS7_0416"
/note="CheR methyltransferase, all-alpha domain; Region:
CheR_N; pfam03705"
/db_xref="CDD:202731"
misc_feature 424049..424834
/locus_tag="BbuZS7_0416"
/note="Methyltransferase, chemotaxis proteins; Region:
MeTrc; smart00138"
/db_xref="CDD:197535"
misc_feature 424247..424825
/locus_tag="BbuZS7_0416"
/note="CheR methyltransferase, SAM binding domain; Region:
CheR; pfam01739"
/db_xref="CDD:201947"
gene 424924..426051
/locus_tag="BbuZS7_0417"
/db_xref="GeneID:7106080"
CDS 424924..426051
/locus_tag="BbuZS7_0417"
/note="identified by match to protein family HMM PF01339"
/codon_start=1
/transl_table=11
/product="protein-glutamate methylesterase"
/protein_id="YP_002374929.1"
/db_xref="GI:218249821"
/db_xref="GeneID:7106080"
/translation="METKISVLIIEYFAVKRKLISDLINSSPKLQVIATASNSKFATN
KLKKHKPEVILMNLEENNIKDILFLEEKNSLNKTIPIVVTSSNQNLINIAASKGADDL
ILVSKNKKSHEIKKEQIINSLLAYGSISIKNKIACNKDMKTKNYERANFILNHKNDIS
SLNQLEEHAKEKTLNEKEIKKLKLRKFDIIAIGVSAGGPVALKSILPEIPESFPPIII
VQHMPKGFTEEFAKNLNNLCKISVKETTNNEILKQGYAYISSGGYHTKIKKIDGNYQI
KTLDGKHINGHKPSIGVLFQSIAEIAKDKAIAIIMTGMGNDGSREIGDIKKAGGLTIA
QDKESSMVFGMPKIAIKENNIDYIVPLSHMVKLLKAILINS"
misc_feature 424933..426039
/locus_tag="BbuZS7_0417"
/note="Chemotaxis response regulator containing a
CheY-like receiver domain and a methylesterase domain
[Cell motility and secretion / Signal transduction
mechanisms]; Region: CheB; COG2201"
/db_xref="CDD:32383"
misc_feature 424945..425235
/locus_tag="BbuZS7_0417"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(424954..424959,425092..425094,425116..425118,
425227..425229)
/locus_tag="BbuZS7_0417"
/note="active site"
/db_xref="CDD:29071"
misc_feature 425092..425094
/locus_tag="BbuZS7_0417"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(425101..425106,425110..425118)
/locus_tag="BbuZS7_0417"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 425488..426036
/locus_tag="BbuZS7_0417"
/note="CheB methylesterase; Region: CheB_methylest;
pfam01339"
/db_xref="CDD:144802"
gene 426076..427290
/locus_tag="BbuZS7_0418"
/db_xref="GeneID:7106201"
CDS 426076..427290
/locus_tag="BbuZS7_0418"
/note="identified by match to protein family HMM PF01963;
match to protein family HMM TIGR00261"
/codon_start=1
/transl_table=11
/product="pheromone shutdown protein"
/protein_id="YP_002374930.1"
/db_xref="GI:218249773"
/db_xref="GeneID:7106201"
/translation="MDNKKENTETEDCFSHVSKFNIHNKTIYILGTAHVSKKSSEDTA
NLIEILKPDYIAVELDEARYHSILNTNENEKWRNLDIDKALKQGKAFFLIINIILSNF
QKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRAWISIPIFEKAKIIS
SLFSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVLIDERDEFITNKILEGE
GIILAIVGAGHVSGIMRTLKEISQNKKIINVEELEKIPKKHFSFSKVLSYLIAISIIL
LIVSSFYFKGFDFAYKNLKLWIISNSLFSGIASILLKSHPLTILTAIIGSPIFSLIPF
IGTGMVAGLVEAYINKPKVKDFENLQEELSTIKGYFKNKVTRILLIVLFVNLGSTIGT
IVGLKFLLNVFK"
misc_feature 426139..427287
/locus_tag="BbuZS7_0418"
/note="pheromone shutdown-related protein TraB; Region:
traB; TIGR00261"
/db_xref="CDD:129363"
gene 427327..427962
/locus_tag="BbuZS7_0419"
/db_xref="GeneID:7106150"
CDS 427327..427962
/locus_tag="BbuZS7_0419"
/EC_number="2.7.4.3"
/note="essential enzyme that recycles AMP in active cells;
converts ATP and AMP to two molecules of ADP"
/codon_start=1
/transl_table=11
/product="adenylate kinase"
/protein_id="YP_002374931.1"
/db_xref="GI:218249221"
/db_xref="GeneID:7106150"
/translation="MGLVFLGPPGSGKGTISKIISNEFKYQHISTGDLFRENILNSTA
LGQEIKKIVERGELVPDLITIKIVEDKIKAIKKNKDFILDGFPRNICQAEALDKFLPN
VKIINFLIDEELVIKRLSGRRICKSCNNIFNIYTLTTKKNGICDVCGGDLYQREDDKE
ECLKTRLKEYKLQTKPLIEFYSKCSRLNNVDASVKIDEIKKKIIKIMLKKN"
misc_feature 427327..427908
/locus_tag="BbuZS7_0419"
/note="adenylate kinase; Provisional; Region: PRK14526"
/db_xref="CDD:172992"
misc_feature 427333..427905
/locus_tag="BbuZS7_0419"
/note="Adenylate kinase (ADK) catalyzes the reversible
phosphoryl transfer from adenosine triphosphates (ATP) to
adenosine monophosphates (AMP) and to yield adenosine
diphosphates (ADP). This enzyme is required for the
biosynthesis of ADP and is essential for...; Region: ADK;
cd01428"
/db_xref="CDD:30189"
misc_feature order(427417..427419,427432..427434,427501..427503,
427576..427581,427585..427590,427600..427602)
/locus_tag="BbuZS7_0419"
/note="AMP-binding site [chemical binding]; other site"
/db_xref="CDD:30189"
misc_feature order(427432..427434,427576..427578,427588..427590,
427690..427692,427822..427824,427834..427836)
/locus_tag="BbuZS7_0419"
/note="ATP-AMP (Ap5A)-binding site [chemical binding];
other site"
/db_xref="CDD:30189"
gene 427986..429014
/locus_tag="BbuZS7_0420"
/db_xref="GeneID:7106762"
CDS 427986..429014
/locus_tag="BbuZS7_0420"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374932.1"
/db_xref="GI:218249465"
/db_xref="GeneID:7106762"
/translation="MLIKKICFCLLLLQAKIILSQDQQNLEFNNEYFYFNFQSAYYPP
HELGTNGSGFSQSFKHPNFQNIDPSLKIPVNYWGGIKLISYLGYYKNFKALNNPNSIF
FKNNGIDIDLNIGLSPVIVSFKSTVSFTPISFLNLYASNELGIGWQAFGFKGVGVHIE
NGKYSNAVEFYSEITAGGRFQFDLNAIFQGEWTHIITVIGNDFTYLINPHAKKDQLWK
YKADDGKNINGILIKPYALLAYKMPIPLNTIGILYEGKTQIGKERNISSWKNKGWGSD
IFYHNISIVANFEIIKPLTLGLQFKLSTNPTYTSNTAGLADISKRIATGNSYFYYDSI
GMSITYKY"
gene complement(429033..429950)
/locus_tag="BbuZS7_0421"
/db_xref="GeneID:7106542"
CDS complement(429033..429950)
/locus_tag="BbuZS7_0421"
/note="identified by match to protein family HMM PF00072;
match to protein family HMM PF00990; match to protein
family HMM TIGR00254"
/codon_start=1
/transl_table=11
/product="response regulatory protein"
/protein_id="YP_002374933.1"
/db_xref="GI:218249909"
/db_xref="GeneID:7106542"
/translation="MIIKDKAFEAENQKLLIVDDSPHNLDLLVNILQGAYEIEVATNG
LDALKQVEKDSPDLILLDIGLPDINGYEVCRKLKSDPDTKEIPVIFISSRSSTDAQLE
GFNVGGVDYILKPFNSRIIDARVKTHLELKRLRDYFKSLSRIDGLTQIPNRRFFMDKF
SKSWMKALESKEIIIVGMLDIDNFKNYNDNYGHTNGDECLKSIAKALYKVSLKYKIDV
ARYGGEEFIFFSVNKSLNEMINIIKTMINDIKRLRIVHEHSSVSSIVTVSIGLAQEVP
IDNNFTNIIKLADRKLYEAKVSGRNQFRY"
misc_feature complement(429573..429908)
/locus_tag="BbuZS7_0421"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(429564..429905)
/locus_tag="BbuZS7_0421"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(429606..429611,429618..429620,
429675..429677,429741..429743,429765..429767,
429891..429896))
/locus_tag="BbuZS7_0421"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(429765..429767)
/locus_tag="BbuZS7_0421"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(429741..429749,429753..429758))
/locus_tag="BbuZS7_0421"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(429603..429611)
/locus_tag="BbuZS7_0421"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(429039..429524)
/locus_tag="BbuZS7_0421"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(429279..429281,429411..429413))
/locus_tag="BbuZS7_0421"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(429276..429287,429291..429293,
429360..429362,429372..429374,429384..429389,
429396..429398))
/locus_tag="BbuZS7_0421"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(429219..429221,429306..429308))
/locus_tag="BbuZS7_0421"
/note="I-site; other site"
/db_xref="CDD:143635"
gene complement(429959..434443)
/locus_tag="BbuZS7_0422"
/db_xref="GeneID:7106369"
CDS complement(429959..434443)
/locus_tag="BbuZS7_0422"
/note="identified by match to protein family HMM PF00072;
match to protein family HMM PF00512; match to protein
family HMM PF02518"
/codon_start=1
/transl_table=11
/product="sensory transduction histidine kinase"
/protein_id="YP_002374934.1"
/db_xref="GI:218249593"
/db_xref="GeneID:7106369"
/translation="MKKANFLSTNFLILLLVCFVNVNLFSKDIFKFKLVDQFFPFYYK
NNKGEYEGLIFSILDKWAKDNNADIMVEHIDNLNESEIEDEAIYLGLTYNVKLNDFFY
FKSELARSISILFFKNSNKKYKNTHSTFLSNFNIGVIKNTIYEDILRLKNVNTIFLAD
NSQELVLALKNDKVDYIYGDCKTLHYIANNFLSEDLVIFTGDVFYSIKNRVAISRNAP
EIVKNLNLDLFSYLMKMPEELVFSFLDSNAKGSFVDVGLYNDYPPLSFINSQGKLSGI
LVDLWNLLSRQHIFKPIFKGFSKEDIKKSLDGKSVGIFGGIISNDSVLENVNYVVSKP
IYPLNFKFYSKDLSNDAGPINSQFIDFNFNNIQLNKNKDIVNNFIDIVNNSYGFIENS
ITTKYLLKLNGYNGRLKSYDSIFNKNRFLVLAIDNRIYKVIKYILNSIFDDISFESLL
QIDKNWLDKEEINSSRINSYKIMNKVKFNIEEKIWLSKNNKLNLAVKNWYPIDYVEAN
NYKGINQFLLDKIRMFSGLRFNIIKVHSSLDLKKLIKSGKIDMLNTNATDSNLDNVFN
IKLNSRIPLYIFSNKKRVLPSRSLEKFAILDFLYSKNLASNIKSKLILVSSFNEALLL
LYKGKVDGIISDEYTAAAVFEELNIDDVEKIPTFRDLAFDLSLAIYNQDYILKEIIQK
VVMRSNVDSQMYLNDWKFDIYYKSRSIRFKNFKFLVITFIIFYFTFLGFVIIFMFRLS
FEQKRRYSFVMNEKKIAEAANAAKTIFIANVSHDIRTPINGIMAATELLDTTILTDVQ
KDYVRMINYSSDSLLSLIDDILYLSKIDVNELYVESQEIDLESEMEMVLKAFQSQCAK
KNIDLFSYSKSIFNNYIKGDIVKIKQVLINLIGNAFKFTDDGVIVLNYEEVCRTRTDG
NRVLVTVEFKVIDTGKGIEKENFSKIFEIFKQEDDSSSRVHEGAGLGLSISRELIRLM
GGLGIAVDSKVGEGTTFSFMLPFLLGSELKSKKLSINRFQSVNGDNKVLNVLLSQKSI
KIFEHCSILLGCSSNVRYVASFEDAYKVFKKYPSYNFVYINVNNDNIQEGIRLANNIE
RLNSDVQIIFLFYYLDNKALKNLKYGYVKKPLMGLGICSILYKKEFNPEMDFEDLVPI
DSALRIKEPINVLIAEDNQVNQKVLKDILVVIGINENFIDVVDDGVKALKSLKDKKYT
ISFIDIRMPRYDGFSVAKEIRKFEKAKNLKPCVLVAVTAHALQEYKDKCLASGMNDYI
SKPIHISSIKTILKKYLQFEVDDIGENEDLNQLVKFPNLDVNRALKELNLSYVSYSEL
CRGLVDFISINIIDLEKAFDEEDLSLIKDISHSISGALSNMRSELYKDFQKIETSKDS
ISELKKMYSFVKDDLFQLISDIKENILFESEIVSENKLYFKNNDQFLNLLNKLLIGIK
TRKPREYKEILESINKYVLDDNIQVLFSDLRRNLRLYRFAESSKILEEIIEMLNNKRY
"
misc_feature complement(433769..434338)
/locus_tag="BbuZS7_0422"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cl15306"
/db_xref="CDD:199164"
misc_feature complement(order(433904..433906,434015..434017,
434153..434155,434330..434332))
/locus_tag="BbuZS7_0422"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29040"
misc_feature complement(order(433925..433927,433943..433945,
433955..433957))
/locus_tag="BbuZS7_0422"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:29040"
misc_feature complement(433814..433831)
/locus_tag="BbuZS7_0422"
/note="hinge residues; other site"
/db_xref="CDD:29040"
misc_feature complement(<432029..432133)
/locus_tag="BbuZS7_0422"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(432029..432031,432041..432043,
432089..432091,432098..432100,432110..432112,
432119..432121,432131..432133))
/locus_tag="BbuZS7_0422"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(432125..432127)
/locus_tag="BbuZS7_0422"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(431465..431806)
/locus_tag="BbuZS7_0422"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(431477..431479,431483..431488,
431501..431503,431507..431509,431558..431569,
431648..431653,431657..431659,431663..431665,
431681..431683,431765..431767,431774..431776,
431786..431788))
/locus_tag="BbuZS7_0422"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(431774..431776)
/locus_tag="BbuZS7_0422"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(431561..431563,431567..431569,
431651..431653,431657..431659))
/locus_tag="BbuZS7_0422"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature complement(430616..430972)
/locus_tag="BbuZS7_0422"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(430607..430969)
/locus_tag="BbuZS7_0422"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(430649..430654,430661..430663,
430718..430720,430793..430795,430817..430819,
430955..430960))
/locus_tag="BbuZS7_0422"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(430817..430819)
/locus_tag="BbuZS7_0422"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(430793..430801,430805..430810))
/locus_tag="BbuZS7_0422"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(430646..430654)
/locus_tag="BbuZS7_0422"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(434541..434651)
/gene="rrf"
/locus_tag="BbuZS7_0423"
/db_xref="GeneID:7106844"
rRNA complement(434541..434651)
/gene="rrf"
/locus_tag="BbuZS7_0423"
/product="5S ribosomal RNA"
/db_xref="GeneID:7106844"
gene complement(434674..437607)
/gene="rrl"
/locus_tag="BbuZS7_0426"
/db_xref="GeneID:7106283"
rRNA complement(434674..437607)
/gene="rrl"
/locus_tag="BbuZS7_0426"
/product="23S ribosomal RNA"
/db_xref="GeneID:7106283"
gene complement(437808..438647)
/locus_tag="BbuZS7_0427"
/db_xref="GeneID:7106281"
CDS complement(437808..438647)
/locus_tag="BbuZS7_0427"
/note="identified by match to protein family HMM PF00702;
match to protein family HMM PF05116; match to protein
family HMM PF08282; match to protein family HMM TIGR00099;
match to protein family HMM TIGR01484"
/codon_start=1
/transl_table=11
/product="haloacid dehalogenase"
/protein_id="YP_002374935.1"
/db_xref="GI:218249395"
/db_xref="GeneID:7106281"
/translation="MNSNYKRYKMLVFDLDGTLLNNNHEIAFLTLEVLLALKEDFKII
IATGRRLSEVKNIRSQLKEISINENYLVTANGAEVFLQENLIFRYAMNYDLAKEILKI
NTDNVDVNLYTFDTWYSNADVKSPIMKHFIKDLGLNVIIGDLTKLNVDSVSKIVYYCD
DLAILNKLDTEIKSKDFQDTRVFFSSKDLLEVTNINANKYNAIKNIAFLESIPLCDVL
AFGDNNNDYEMLKNLGKGVLMKNANEFLKINLAKNEITRFSNNEDGVARFLIDFFKLN
IKY"
misc_feature complement(437841..438617)
/locus_tag="BbuZS7_0427"
/note="haloacid dehalogenase-like hydrolase; Region:
Hydrolase_3; pfam08282"
/db_xref="CDD:203899"
misc_feature complement(<438357..438617)
/locus_tag="BbuZS7_0427"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature complement(order(438504..438509,438600..438608))
/locus_tag="BbuZS7_0427"
/note="active site"
/db_xref="CDD:119389"
misc_feature complement(438591..438608)
/locus_tag="BbuZS7_0427"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature complement(438507..438509)
/locus_tag="BbuZS7_0427"
/note="motif II; other site"
/db_xref="CDD:119389"
gene complement(438783..439343)
/locus_tag="BbuZS7_0428"
/db_xref="GeneID:7106386"
CDS complement(438783..439343)
/locus_tag="BbuZS7_0428"
/EC_number="3.2.2.-"
/note="identified by match to protein family HMM PF02245;
match to protein family HMM TIGR00567"
/codon_start=1
/transl_table=11
/product="DNA-3-methyladenine glycosylase"
/protein_id="YP_002374936.1"
/db_xref="GI:218249493"
/db_xref="GeneID:7106386"
/translation="MDRYFFLQDATTVAKLLLGNLLIRKIDKEEIVTRIVETEAYMGI
TDSACHSYGGKITNRTSAMYRIGGYSYVYIIYGMHYMFNVVTADKNNPQAVLIRSVEP
ISPLLGEKSILTNGPGKLTKFLNIDLTFNKVDLIGNNELFLQRGLNLDFNIVCSKRIN
INYAQESDINKLWRFYIKDNKFVSRR"
misc_feature complement(438792..439331)
/locus_tag="BbuZS7_0428"
/note="Alkyladenine DNA glycosylase catalyzes the first
step in base excision repair; Region: AAG; cd00540"
/db_xref="CDD:187726"
misc_feature complement(order(438867..438869,439050..439052,
439056..439058,439095..439097,439116..439118,
439131..439133,439194..439196,439221..439223,
439227..439229))
/locus_tag="BbuZS7_0428"
/note="active site"
/db_xref="CDD:187726"
misc_feature complement(order(438864..438869,438960..438962,
438987..438998,439050..439052,439056..439058,
439095..439097,439107..439109,439116..439118,
439125..439127,439164..439166,439173..439175,
439179..439181,439194..439196,439200..439202,
439221..439223))
/locus_tag="BbuZS7_0428"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:187726"
gene 439717..439793
/locus_tag="BbuZS7_0429"
/db_xref="GeneID:7106570"
tRNA 439717..439793
/locus_tag="BbuZS7_0429"
/product="tRNA-Ile"
/db_xref="GeneID:7106570"
gene 440244..440393
/locus_tag="BbuZS7_0430"
/db_xref="GeneID:7106300"
CDS 440244..440393
/locus_tag="BbuZS7_0430"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374937.1"
/db_xref="GI:218249923"
/db_xref="GeneID:7106300"
/translation="MHFSETTSGFIESLLLLLDIFLNINRSQLNPEILTSCVSHSNNY
FNKVT"
gene complement(440426..440504)
/locus_tag="BbuZS7_0431"
/db_xref="GeneID:7106383"
tRNA complement(440426..440504)
/locus_tag="BbuZS7_0431"
/product="tRNA-Ala"
/db_xref="GeneID:7106383"
gene complement(440675..442212)
/gene="rrs"
/locus_tag="BbuZS7_0432"
/db_xref="GeneID:7106295"
rRNA complement(440675..442212)
/gene="rrs"
/locus_tag="BbuZS7_0432"
/product="16S ribosomal RNA"
/db_xref="GeneID:7106295"
gene complement(442421..442969)
/locus_tag="BbuZS7_0433"
/db_xref="GeneID:7106282"
CDS complement(442421..442969)
/locus_tag="BbuZS7_0433"
/note="identified by match to protein family HMM PF05014"
/codon_start=1
/transl_table=11
/product="nucleoside 2-deoxyribosyltransferase"
/protein_id="YP_002374938.1"
/db_xref="GI:218249830"
/db_xref="GeneID:7106282"
/translation="MKIYLASPFFKEEEIKLRDEVLKFLEEFNLEVFSPEHHAVKKMG
LLEKVDYKFVNRDIREKIREIDLKELVSSDIVLALVNYVDSGTAYERGFAFAKKIPSI
DFFKDKQDSDFYNLMYSDCAAAFSNYKDLREGILTFKELWIKFKGDNENFRTFFDYLK
AKLGNKLKKIFTTLPVNEKCGC"
misc_feature complement(442436..442969)
/locus_tag="BbuZS7_0433"
/note="Nucleoside 2-deoxyribosyltransferase [Nucleotide
transport and metabolism]; Region: COG3613"
/db_xref="CDD:33412"
gene complement(443064..443780)
/locus_tag="BbuZS7_0434"
/db_xref="GeneID:7106210"
CDS complement(443064..443780)
/locus_tag="BbuZS7_0434"
/note="identified by match to protein family HMM PF00590;
match to protein family HMM TIGR00096"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374939.1"
/db_xref="GI:218249384"
/db_xref="GeneID:7106210"
/translation="MFYLFLVLEELKGAVLYIVGTPIGNLEDITYRAIDVLKSVNVIF
AEDTRVTSKLLSRYKINKKMISCNAVTENKKISLLLDYLAKGNSVAFVSDAGTPGLSD
PGSLLVAAAFREGYKVCPIPGVSSFNTIVSVNPFRDKSVFFEGFLPNKGLKRFKRIAE
LYKRGDAFVLLESGHRILKLLVEISSVSLDAKVLIGREMTKIYEEYQIGKPLELKKYF
ESSKDKVKGEFTILVSRSRS"
misc_feature complement(443079..443735)
/locus_tag="BbuZS7_0434"
/note="Ribosomal RNA small subunit methyltransferase I,
also known as rRNA (cytidine-2'-O-)-methyltransferase
RsmI; Region: RsmI; cd11648"
/db_xref="CDD:212507"
misc_feature complement(443139..443735)
/locus_tag="BbuZS7_0434"
/note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region:
TP_methylase; pfam00590"
/db_xref="CDD:201330"
misc_feature complement(order(443091..443099,443184..443189,
443193..443195,443268..443270,443403..443408,
443478..443483,443490..443498,443712..443714))
/locus_tag="BbuZS7_0434"
/note="putative SAM binding site [chemical binding]; other
site"
/db_xref="CDD:212507"
misc_feature complement(order(443346..443360,443385..443390,
443397..443402,443406..443417,443421..443423,
443454..443459,443463..443468,443475..443492,
443679..443681,443685..443696))
/locus_tag="BbuZS7_0434"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:212507"
gene 443950..444267
/locus_tag="BbuZS7_0435"
/db_xref="GeneID:7106681"
CDS 443950..444267
/locus_tag="BbuZS7_0435"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374940.1"
/db_xref="GI:218249647"
/db_xref="GeneID:7106681"
/translation="MFALIRKIFMIYFLCITLAGFAMIFIDSKFTEQPNVKENQSKIN
QHTIEPNLIMFTSSIGGFLGVYVGIWIFNYDKSNFYLNWGNLIILIYNIALIITVYSK
SHS"
gene complement(444297..444686)
/locus_tag="BbuZS7_0436"
/db_xref="GeneID:7106107"
CDS complement(444297..444686)
/locus_tag="BbuZS7_0436"
/note="identified by match to protein family HMM PF08973"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374941.1"
/db_xref="GI:218249537"
/db_xref="GeneID:7106107"
/translation="MISGLNPTLRLFKDHKILYSNMERGLKPLLEVDNFINKYIQNKE
GLEIYDKVVGKAAAVIIYNIGLQNVQAGVVSQPAKDFLESRGIKVAYKKLVEKINDRA
ESLIESLENPEEVYKYMIKRGIIVNNL"
misc_feature complement(444324..444683)
/locus_tag="BbuZS7_0436"
/note="Domain of unknown function (DUF1893); Region:
TM1506; pfam08973"
/db_xref="CDD:149897"
gene 444800..445405
/locus_tag="BbuZS7_0437"
/db_xref="GeneID:7106787"
CDS 444800..445405
/locus_tag="BbuZS7_0437"
/note="identified by match to protein family HMM PF01205;
match to protein family HMM TIGR00257"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374942.1"
/db_xref="GI:218249433"
/db_xref="GeneID:7106787"
/translation="MIFVPKNNSNSKIEIKNSIFVSYIFNIEKKDDINKTIKKYKIKF
KNATHVVYGFRIGNKNSFLNGMSDDREPNLTAGKPTLDAIIHNNLTDTLIITLRYFGG
TLLGRGGLIKAYYKSAKEVINNTSIMEKEELEILSLNLTYNQYNSLLKMKNKLEIEII
DSNFSNKINTSIKFKTKNKQKISEFFIENGLIQEILKFNKE"
misc_feature 444806..445402
/locus_tag="BbuZS7_0437"
/note="uncharacterized protein, YigZ family; Region:
IMPACT_YIGZ; TIGR00257"
/db_xref="CDD:129359"
misc_feature 444857..445168
/locus_tag="BbuZS7_0437"
/note="Uncharacterized protein family UPF0029; Region:
UPF0029; pfam01205"
/db_xref="CDD:201661"
gene 445514..446266
/locus_tag="BbuZS7_0438"
/db_xref="GeneID:7106427"
CDS 445514..446266
/locus_tag="BbuZS7_0438"
/note="identified by match to protein family HMM PF01656"
/codon_start=1
/transl_table=11
/product="chromosome segregation protein ParA"
/protein_id="YP_002374943.1"
/db_xref="GI:218249317"
/db_xref="GeneID:7106427"
/translation="MKIISVINQKGGVGKTTSAINISYSMTLLNKKILLIDIDSQGNS
TSGTNTSKHIAEKSSYELINKKIKVKPLNHFGLDIIPSSIKLALLEKELINELSRENF
LKNALTLYEKDKYDFIIIDCPPTLSILTINALIASNYLLIPIETEFFAFEGINQLIDT
ITTVKQINKNLEIAGVFINKYDIRNKSKEKYVSSLKKVFKEKLLNTKIRKNITISKSQ
EAKMPVYEYDKESNAAKDFLELSKEIINKIKE"
misc_feature 445514..446263
/locus_tag="BbuZS7_0438"
/note="ATPases involved in chromosome partitioning [Cell
division and chromosome partitioning]; Region: Soj;
COG1192"
/db_xref="CDD:31385"
misc_feature 445520..>445585
/locus_tag="BbuZS7_0438"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:73302"
misc_feature 445541..445561
/locus_tag="BbuZS7_0438"
/note="P-loop; other site"
/db_xref="CDD:73302"
misc_feature 445559..445561
/locus_tag="BbuZS7_0438"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:73302"
misc_feature <445856..446050
/locus_tag="BbuZS7_0438"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:73302"
misc_feature 445874..445876
/locus_tag="BbuZS7_0438"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:73302"
misc_feature <446054..446251
/locus_tag="BbuZS7_0438"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
gene 446269..446982
/locus_tag="BbuZS7_0439"
/db_xref="GeneID:7106527"
CDS 446269..446982
/locus_tag="BbuZS7_0439"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374944.1"
/db_xref="GI:218249814"
/db_xref="GeneID:7106527"
/translation="MSDNLETLMFLMGKKLETSSNNSENTEKKEIISIERKNFDYNKL
DKDISDFLKKKQYEIFNIFNNTYTKIGKILKDAQDKLKGNNQYNGLFYQWFKSMGFKK
DKVYALISRYNLLVENSDKQLTIEKLPLSLSYEISKKSCPPILKTEVLNGKINSLKEF
KIVYKKSFDLKDTRKPLLKKNEKYENDIKEVLDFILKNIKEFKNIEFNKLRQENLKLF
FNSILEIKKKIKYIKNNSI"
gene complement(447234..448016)
/gene="spo0J"
/locus_tag="BbuZS7_0440"
/db_xref="GeneID:7106193"
CDS complement(447234..448016)
/gene="spo0J"
/locus_tag="BbuZS7_0440"
/note="identified by match to protein family HMM PF02195;
match to protein family HMM TIGR00180"
/codon_start=1
/transl_table=11
/product="stage 0 sporulation protein J"
/protein_id="YP_002374945.1"
/db_xref="GI:218249938"
/db_xref="GeneID:7106193"
/translation="MDGVFKMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQP
LIVCKANDRYKIIVGERRFRAAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTP
VEEAYAYKNIMNKYSLTQKDLSEKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGH
AKVILSLKDRQDRYNLYLIILKKKFSVRDAEKYVKNFSKSIVKKRELEQDPFLNNIKE
FLFDKIQTKIDIKGNQNKGKIEIEYFTAGDLKRIVSLFGHSS"
misc_feature complement(447474..448016)
/gene="spo0J"
/locus_tag="BbuZS7_0440"
/note="ParB-like partition proteins; Region: parB_part;
TIGR00180"
/db_xref="CDD:161748"
misc_feature complement(447732..448001)
/gene="spo0J"
/locus_tag="BbuZS7_0440"
/note="ParB-like nuclease domain; Region: ParB;
smart00470"
/db_xref="CDD:197744"
misc_feature complement(<447600..447689)
/gene="spo0J"
/locus_tag="BbuZS7_0440"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cl15761"
/db_xref="CDD:210161"
gene complement(448135..450567)
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/db_xref="GeneID:7106244"
CDS complement(448135..450567)
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/EC_number="5.99.1.3"
/note="identified by match to protein family HMM PF00521;
match to protein family HMM PF03989; match to protein
family HMM TIGR01063"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit A"
/protein_id="YP_002374946.1"
/db_xref="GI:218249915"
/db_xref="GeneID:7106244"
/translation="MAVGENKEQILNVRIEDEIKTSYLNYAMSVIVSRALPDVRDGLK
PVHRRILYSMYEMGLRSDKAFKKAGRIVGDVLGKYHPHGDQSIYDALVRLAQDFSLRY
PVIRGQGNFGSIDGDPPAAMRYTEAKMEKITEYIVKDIDKETVNFKSNYDDSLSEPEI
MPSSFPFLLVNGSSGIAVGMATNMAPHNLREICDAIVYMLDNENASIFDLLKIVKGPD
FPTFGEIVYNDNLIKAYKTGKGSVVIRARYHIEERAEDRNAIIVTEIPYTVNKSALLM
KVALLAKEEKLEGLLDIRDESDREGIRIVLEVKRGFDPHVIMNLLYEYTEFKKHFSIN
NLALVNGIPKQLNLEELLFEFIEHRKNIIERRIEFDLRKAKEKAHVLEGLNIALNNID
EVIKIIKSSKLAKDARERLVSNFGLSEIQANSVLDMRLQKLTALEIFKLEEELNILLS
LIKDYEDILLNPVRIINIIREETINLGLKFGDERRTKIIYDEEVLKTSMSDLMQKENI
VVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEG
KLYLINAYEIKDSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKI
ARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRL
TNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGATGY
TSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVAGKVSEQGKDARGIQVLFLD
NDSLVSVSKFIK"
misc_feature complement(448138..450540)
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/note="DNA gyrase, A subunit; Region: gyrA; TIGR01063"
/db_xref="CDD:162183"
misc_feature complement(449182..450474)
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/note="DNA Topoisomerase, subtype IIA; domain A';
bacterial DNA topoisomerase IV (C subunit, ParC),
bacterial DNA gyrases (A subunit, GyrA),mammalian DNA
toposiomerases II. DNA topoisomerases are essential
enzymes that regulate the conformational changes in
DNA...; Region: TOP4c; cd00187"
/db_xref="CDD:29149"
misc_feature complement(order(450085..450087,450094..450165,
450169..450225,450229..450378,450391..450474))
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/note="CAP-like domain; other site"
/db_xref="CDD:29149"
misc_feature complement(450196..450198)
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/note="active site"
/db_xref="CDD:29149"
misc_feature complement(order(449251..449301,449350..449355,
449377..449388,449395..449403))
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/note="primary dimer interface [polypeptide binding];
other site"
/db_xref="CDD:29149"
misc_feature complement(448906..449043)
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature complement(448759..448899)
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature complement(448444..448587)
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature complement(448288..448434)
/gene="gyrA"
/locus_tag="BbuZS7_0441"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
gene complement(450579..452483)
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/db_xref="GeneID:7106375"
CDS complement(450579..452483)
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/EC_number="5.99.1.3"
/note="identified by match to protein family HMM PF00204;
match to protein family HMM PF00986; match to protein
family HMM PF01751; match to protein family HMM PF02518;
match to protein family HMM TIGR01059"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit B"
/protein_id="YP_002374947.1"
/db_xref="GI:218249329"
/db_xref="GeneID:7106375"
/translation="MNYVASNIQVLKGLEAVRKRPGMYIGSVSINGLHHLVYEVVDNS
IDEALAGFCDRIDVIINLDNTITVIDNGRGIPTDIHEEEGISALELVLTKLHSGGKFN
KGTYKVSGGLHGVGISVVNALSSFLEVYVNRDGKIFRQTFSKGIPTSKVEVVGESSVT
GTKVTFLADSEIFETLDYNFDVLEKRLKELAFLNDKIYISIEDKRIGKEKSSKFYFEG
GIKSFVDYLTNDSKAFQSEPYYIDGFINDVIVNVGLKWTESYSDNILSFVNNINTREG
GTHVMGFRSGLTKAMNEAFKNSKISKKDIPNLTGDDFKEGLTAVISVKVPEPQFEGQT
KSKLGNSEIRKIVEVVVYEHLLEIINLNPLEIDTILGKAIKAARAREAARKARESERK
KNAFESLALPGKLADCASKNPLEREIYIVEGDSAGGSAKMGRNRFFQAILPLWGKMLN
VEKTREDKVITNDKLIPIIASLGAGVGKTFDITKLRYHKIIIMADADVDGSHIRTLLL
AFFFRYMRDLIENGYIYIAMPPLYKIKYDNRIYYFYEEKEKEKFLDSIETKNRNSISL
QRYKGLGEMNPTQLWETTMDPARRKMRLMNIDDAIEAEKIFVTLMGDLVEPRKEFIEQ
NALNVINLDV"
misc_feature complement(450582..452483)
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="DNA gyrase subunit B; Validated; Region: gyrB;
PRK05644"
/db_xref="CDD:180181"
misc_feature complement(<452112..452387)
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(452133..452144,452259..452264,
452268..452270,452274..452276,452280..452282,
452346..452348,452355..452357,452367..452369))
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(452355..452357)
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(452136..452138,452142..452144,
452262..452264,452268..452270))
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature complement(<451422..451832)
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
a ribosomal S5 domain 2-like fold, of the type found in
proteins of the type IIA family of DNA topoisomerases
similar to the B subunits of E. coli DNA gyrase and E.
coli Topoisomerase IV which are; Region:
TopoII_Trans_DNA_gyrase; cd00822"
/db_xref="CDD:48467"
misc_feature complement(451677..451679)
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="anchoring element; other site"
/db_xref="CDD:48467"
misc_feature complement(order(451485..451487,451491..451496,
451503..451505))
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48467"
misc_feature complement(order(451479..451481,451485..451487))
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:48467"
misc_feature complement(450897..451238)
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in proteins of the type IIA family of DNA topoisomerases
similar to the Escherichia coli GyrB subunit. TopoIIA
enzymes cut both strands of the...; Region:
TOPRIM_TopoIIA_GyrB; cd03366"
/db_xref="CDD:173786"
misc_feature complement(order(450987..450989,450993..450995,
450999..451001,451206..451208,451215..451220))
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="active site"
/db_xref="CDD:173786"
misc_feature complement(order(450999..451001,451218..451220))
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173786"
misc_feature complement(450615..450809)
/gene="gyrB"
/locus_tag="BbuZS7_0442"
/note="DNA gyrase B subunit, carboxyl terminus; Region:
DNA_gyraseB_C; pfam00986"
/db_xref="CDD:201537"
gene 452671..454134
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/db_xref="GeneID:7106624"
CDS 452671..454134
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/note="identified by match to protein family HMM PF00308;
match to protein family HMM PF08299; match to protein
family HMM TIGR00362"
/codon_start=1
/transl_table=11
/product="chromosomal replication initiator protein DnaA"
/protein_id="YP_002374948.1"
/db_xref="GI:218249778"
/db_xref="GeneID:7106624"
/translation="MEKSKNIWSLILTEIKKELSEEEFYVWFENLCFLESIGDNIKIS
TPNLFHKNQIEKRFTKKIKEILIKNGYNNIVIVFTNQPPKTHSNKQETKNPALNETFS
KFDKLKEKTTSKEAIQNIQDRIKMYIKKEEEEEPTNFKNPFLKKRYTFENFIIGPNNK
LAYNASLSISKNPGKKYNPCLIYGGVGLGKTHLLQSIGNKTEELHHNLKILYVTAENF
LNEFVESIKTHETKKFKKKYRYLDMLLIDDIHDLQKKEGIQEELFHTFNALYEDNKQL
VFTCDRSPSELTNFTDRLKSRFTRGLNVDISKPNFELRAAIVEKKAEEDGINVPKNIL
NLVAQKVTTNVRDLEAAVTKLKAYIDLDNIEIDIEIVEKIIKEIIIYEKETTNEPNNK
INIENIKKILLRELKITHKDIEGHSKKPEITKARHIYAYLLRNFTELSTVEIGKIIGG
KTHSTVLYSINKIDRDRNNDKEINNLITELMNKIKKN"
misc_feature 452683..454128
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/note="chromosomal replication initiation protein;
Reviewed; Region: dnaA; PRK00149"
/db_xref="CDD:178902"
misc_feature 452683..452868
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/note="DnaA N-terminal domain; Region: DnaA_N; pfam11638"
/db_xref="CDD:204696"
misc_feature 453145..453567
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 453220..453243
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(453223..453246,453406..453408,453508..453510)
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 453394..453411
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 453547..453549
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 453880..454122
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/note="C-terminal domain of bacterial DnaA proteins. The
DNA-binding C-terminal domain of DnaA contains a
helix-turn-helix motif that specifically interacts with
the DnaA box, a 9-mer motif that occurs repetitively in
the replication origin oriC. Multiple...; Region:
Bac_DnaA_C; cd06571"
/db_xref="CDD:119330"
misc_feature order(453922..453924,453946..453951,453970..453972,
453988..453996,454021..454035,454042..454044,
454051..454056)
/gene="dnaA"
/locus_tag="BbuZS7_0443"
/note="DnaA box-binding interface [nucleotide binding];
other site"
/db_xref="CDD:119330"
gene 454375..455532
/gene="dnaN"
/locus_tag="BbuZS7_0444"
/db_xref="GeneID:7106155"
CDS 454375..455532
/gene="dnaN"
/locus_tag="BbuZS7_0444"
/EC_number="2.7.7.7"
/note="identified by match to protein family HMM PF00712;
match to protein family HMM PF02767; match to protein
family HMM PF02768; match to protein family HMM TIGR00663"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit beta"
/protein_id="YP_002374949.1"
/db_xref="GI:218249720"
/db_xref="GeneID:7106155"
/translation="MLHNTFFICETNQIMNEIEKAKGIILNRNMNDIWSALLIEVKKS
NLIIKSTDRNIFFESTISIVSETDFKVLINASNFYDAVKAFNFYKKIKIVFNENNSKL
EIMGELNDKKEEYEDHLKEPTFSYEEIENYNYDMVNEDYTFGIEIKQKSFKKVINRIA
FSAHLDESKNVLNGVYFSKDEDSKLLLVSTNGHRMSICKTEVIVEEDVNFIVPVKIFN
FLKHLMSGEGMVKIKFSDKKFYVEFDNYKIACSLINGNYPDYKSIIPKEQKNKSLVSL
GILKDRLARVNLYVDKSRKLVLTFSELQLKLLGEDLITGRKGEFFIKDPNYLYDGADE
VMAINISYFVEAISVFETSKIEIQFNSGNVLKLSEPENFNFTHLIMPMSLG"
misc_feature 454387..455526
/gene="dnaN"
/locus_tag="BbuZS7_0444"
/note="DNA polymerase III, beta subunit; Region: dnan;
TIGR00663"
/db_xref="CDD:161984"
misc_feature 454393..455520
/gene="dnaN"
/locus_tag="BbuZS7_0444"
/note="Beta clamp domain. The beta subunit (processivity
factor) of DNA polymerase III holoenzyme, refered to as
the beta clamp, forms a ring shaped dimer that encircles
dsDNA (sliding clamp) in bacteria. The beta-clamp is
structurally similar to the trimeric...; Region:
beta_clamp; cd00140"
/db_xref="CDD:29053"
misc_feature order(454456..454458,454600..454602,454621..454623,
455017..455019)
/gene="dnaN"
/locus_tag="BbuZS7_0444"
/note="putative DNA binding surface [nucleotide binding];
other site"
/db_xref="CDD:29053"
misc_feature order(454603..454605,454612..454614,454720..454722,
454726..454728,455236..455238,455326..455331)
/gene="dnaN"
/locus_tag="BbuZS7_0444"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29053"
misc_feature order(454942..454944,454948..454959,455389..455391,
455512..455520)
/gene="dnaN"
/locus_tag="BbuZS7_0444"
/note="beta-clamp/clamp loader binding surface; other
site"
/db_xref="CDD:29053"
misc_feature order(454942..454944,454948..454953,455161..455163,
455263..455265,455302..455307,455398..455400,
455512..455520)
/gene="dnaN"
/locus_tag="BbuZS7_0444"
/note="beta-clamp/translesion DNA polymerase binding
surface; other site"
/db_xref="CDD:29053"
gene 455623..455922
/locus_tag="BbuZS7_0445"
/db_xref="GeneID:7106893"
CDS 455623..455922
/locus_tag="BbuZS7_0445"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374950.1"
/db_xref="GI:218249587"
/db_xref="GeneID:7106893"
/translation="MNDSAFKKIGNVLKDYLESNLLVNKKISSKLLIADKWNQIFEAL
SDDVKFLDFKNEQILFLEVSNSSILCSIAINKSKIINSVKELTGIKIIDIKVLVR"
gene 456014..456169
/gene="rpmH"
/locus_tag="BbuZS7_0446"
/db_xref="GeneID:7106838"
CDS 456014..456169
/gene="rpmH"
/locus_tag="BbuZS7_0446"
/note="in Escherichia coli transcription of this gene is
enhanced by polyamines"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L34"
/protein_id="YP_002374951.1"
/db_xref="GI:218249694"
/db_xref="GeneID:7106838"
/translation="MKRTYQPSRVKRNRKFGFRARMKTKGGRLILSRRRAKGRMKLTV
SDEKKKY"
misc_feature 456014..456145
/gene="rpmH"
/locus_tag="BbuZS7_0446"
/note="50S ribosomal protein L34; Reviewed; Region: rpmH;
PRK00399"
/db_xref="CDD:179004"
gene 456150..456509
/gene="rnpA"
/locus_tag="BbuZS7_0447"
/db_xref="GeneID:7106866"
CDS 456150..456509
/gene="rnpA"
/locus_tag="BbuZS7_0447"
/EC_number="3.1.26.5"
/note="identified by match to protein family HMM
TIGR00188"
/codon_start=1
/transl_table=11
/product="ribonuclease P"
/protein_id="YP_002374952.1"
/db_xref="GI:218249336"
/db_xref="GeneID:7106866"
/translation="MRKRNISLKSKIEIQKIFKEGKLIRFSNLNLKMFYKSNHLVYSR
ILVTFSKGFRGSVKRNRIRRLFKEAFRKRLELLEGIALDIIFVVSYSKLTLTYFSIES
LMKGLVLRCERGIGESK"
misc_feature 456150..456494
/gene="rnpA"
/locus_tag="BbuZS7_0447"
/note="Ribonuclease P; Region: Ribonuclease_P; cl00457"
/db_xref="CDD:212221"
gene 456496..458130
/locus_tag="BbuZS7_0448"
/db_xref="GeneID:7106631"
CDS 456496..458130
/locus_tag="BbuZS7_0448"
/note="functions to insert inner membrane proteins into
the IM in Escherichia coli; interacts with transmembrane
segments; functions in both Sec-dependent and -independent
membrane insertion; similar to Oxa1p in mitochondria"
/codon_start=1
/transl_table=11
/product="inner membrane protein translocase component
YidC"
/protein_id="YP_002374953.1"
/db_xref="GI:218249421"
/db_xref="GeneID:7106631"
/translation="MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQF
DLNKSFDDNEISSVKSNSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNHLNLE
KNPTDLINIDRKNETFFDISFDYFVDDLFLYKKIDDFNHEFKAYFKNNGKTYEYVKKY
TFSKKDEYLMKFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIY
YDNKLKYGKDGLRINNPRWIGSSTKYFGVLVSKENMEVEFKKERGTLKSFIINNVRNK
KNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQ
VFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKK
LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSI
GDSVYHFGYKLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI
MFFFILYNMPSGLLIYWITTNIFTILQQYYIKMHLS"
misc_feature 456499..458127
/locus_tag="BbuZS7_0448"
/note="membrane protein insertase; Provisional; Region:
PRK01318"
/db_xref="CDD:179279"
misc_feature 457519..458118
/locus_tag="BbuZS7_0448"
/note="membrane protein insertase, YidC/Oxa1 family,
C-terminal domain; Region: yidC_oxa1_cterm; TIGR03592"
/db_xref="CDD:211846"
gene 458143..458871
/locus_tag="BbuZS7_0449"
/db_xref="GeneID:7106415"
CDS 458143..458871
/locus_tag="BbuZS7_0449"
/note="identified by match to protein family HMM PF01424"
/codon_start=1
/transl_table=11
/product="spoiiij-associtated protein"
/protein_id="YP_002374954.1"
/db_xref="GI:218249883"
/db_xref="GeneID:7106415"
/translation="MSYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKK
EMIKIRVSPHVKEVKKDGFEIKIGDEICDKILEFVKEMLIKMGYSVHLTIEPKEGGYV
KISIETDSPNILIGREGKNLDSLQLLTNVYASKLIGENGAFNRVILDIGDYRERFKSR
FINLAINSFHKVKRTRRSILLPSMNPFERRIVHTTLNRYSDIKTESEGDGNIKRIRVS
YVRNNRYGINNSRGYQKRDIGFKK"
misc_feature 458146..458802
/locus_tag="BbuZS7_0449"
/note="Predicted RNA-binding protein [General function
prediction only]; Region: Jag; COG1847"
/db_xref="CDD:32032"
misc_feature 458371..458610
/locus_tag="BbuZS7_0449"
/note="jag_K homology RNA-binding domain. The KH domain is
found in proteins homologous to the Bacillus subtilis
protein Jag, which is associated with SpoIIIJ and is
necessary for the third stage of sporulation. The KH
motif is a beta-alpha-alpha-beta-beta...; Region: jag_KH;
cd02414"
/db_xref="CDD:48412"
misc_feature 458488..458499
/locus_tag="BbuZS7_0449"
/note="G-X-X-G motif; other site"
/db_xref="CDD:48412"
misc_feature 458602..458802
/locus_tag="BbuZS7_0449"
/note="R3H domain found in proteins homologous to Bacillus
subtilus Jag, which is associated with SpoIIIJ. SpoIIIJ is
necessary for the third stage of sporulation. The name of
the R3H domain comes from the characteristic spacing of
the most conserved arginine...; Region: R3H_jag; cd02644"
/db_xref="CDD:100073"
misc_feature order(458707..458709,458719..458721)
/locus_tag="BbuZS7_0449"
/note="RxxxH motif; other site"
/db_xref="CDD:100073"
gene 458917..459984
/locus_tag="BbuZS7_0450"
/db_xref="GeneID:7106342"
CDS 458917..459984
/locus_tag="BbuZS7_0450"
/note="identified by match to protein family HMM PF01073;
match to protein family HMM PF01370; match to protein
family HMM PF04321; match to protein family HMM PF07993"
/codon_start=1
/transl_table=11
/product="WbnF"
/protein_id="YP_002374955.1"
/db_xref="GI:218249175"
/db_xref="GeneID:7106342"
/translation="MKIFLTGIAGFIGFHVAKKLVEKGHEVLGIDVLNDYYELKFKHE
RLEALGFCSKDVKTHKIIKSEKYNNLSFAYLDILNKDKLLELFKDHKFTHVCHLAAQA
GIRDSLENPDSYVSINIVGFFNVLDVCRVYKENIEHFVYASTSSVYGINENMPSSEDS
ITDHPLNLYAASKKSNEMMAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIK
NGKAINIFNNGNMARDFTYVDDIADGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIY
NIGTGHATKLLDFISELEANFDKKALKNYMPMQKADVVESCCDILKLKNDVGYEAKVS
IKEGIKEFSQWYKMLESTKKT"
misc_feature 458917..459966
/locus_tag="BbuZS7_0450"
/note="Nucleoside-diphosphate-sugar epimerases [Cell
envelope biogenesis, outer membrane / Carbohydrate
transport and metabolism]; Region: WcaG; COG0451"
/db_xref="CDD:30800"
misc_feature 458917..459960
/locus_tag="BbuZS7_0450"
/note="UDP glucuronic acid epimerase, extended (e) SDRs;
Region: UDP_GE_SDE_e; cd05253"
/db_xref="CDD:187563"
misc_feature order(458935..458937,458941..458952,459007..459015,
459208..459216,459265..459267,459340..459348,
459421..459423,459433..459435,459502..459513)
/locus_tag="BbuZS7_0450"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187563"
misc_feature order(459268..459270,459346..459348,459421..459423,
459433..459435)
/locus_tag="BbuZS7_0450"
/note="active site"
/db_xref="CDD:187563"
misc_feature order(459346..459348,459421..459423,459508..459510,
459553..459555,459589..459591,459613..459615)
/locus_tag="BbuZS7_0450"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:187563"
gene 460151..461230
/gene="fbaA"
/locus_tag="BbuZS7_0451"
/db_xref="GeneID:7106712"
CDS 460151..461230
/gene="fbaA"
/locus_tag="BbuZS7_0451"
/EC_number="4.1.2.13"
/note="catalyzes the formation of glycerone phosphate and
glyceraldehyde 3-phosphate from fructose 1,6,
bisphosphate"
/codon_start=1
/transl_table=11
/product="fructose-bisphosphate aldolase"
/protein_id="YP_002374956.1"
/db_xref="GI:218249891"
/db_xref="GeneID:7106712"
/translation="MGVLDKIKPGVVYGKELHFLYEICKKEGFAIPSINCIGTNSINA
VLEAAKEINSPIMIQFSNSGSAFISGKGLKMEKPQGVSIVGAISGAMHVHLMAEHYGV
PVVLHTDHCAKNLLPWVEGLLEYGEKYYSQHKKPLFSSHMLDLSEEPIKENIEISKKF
LERMAKIEMFLEIELGITGGEEDGVDNSDRALHELFSTPEDIYYGYSELLKVSPNFQI
AAAFGNVHGVYKPGNVKLTPKVLKDGQDYVISKTGVNMAKPVSYVFHGGSGSTIDEIN
EALSYGVVKMNIDTDTQWAAWEGVLNYYKKNESRLQGQLGDGKDIDIPNKKFYDPRVW
LREAEVSMKDRVKIACKNLNNINRN"
misc_feature 460175..461227
/gene="fbaA"
/locus_tag="BbuZS7_0451"
/note="fructose-bisphosphate aldolase; Provisional;
Region: PRK09197"
/db_xref="CDD:181692"
misc_feature 460190..461227
/gene="fbaA"
/locus_tag="BbuZS7_0451"
/note="Class II Type A, Fructose-1,6-bisphosphate (FBP)
aldolases. The enzyme catalyses the zinc-dependent,
reversible aldol condensation of dihydroxyacetone
phosphate with glyceraldehyde-3-phosphate to form
fructose-1,6-bisphosphate. FBP aldolase is...; Region:
FBP_aldolase_IIA; cd00946"
/db_xref="CDD:29572"
misc_feature order(460253..460255,460475..460480,460580..460582,
460670..460672,460676..460678,460685..460696,
460823..460831,460835..460837,460943..460948,
460952..460954,461009..461011,461015..461020)
/gene="fbaA"
/locus_tag="BbuZS7_0451"
/note="active site"
/db_xref="CDD:29572"
misc_feature order(460262..460270,460277..460279,460340..460342,
460349..460357,460412..460414,460424..460426,
460433..460438,460694..460696,461018..461023,
461027..461032,461039..461041,461051..461053,
461060..461062)
/gene="fbaA"
/locus_tag="BbuZS7_0451"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:29572"
misc_feature order(460478..460480,460580..460582,460670..460672,
460691..460693,460826..460828,460943..460945)
/gene="fbaA"
/locus_tag="BbuZS7_0451"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:29572"
misc_feature order(460823..460825,460829..460831,460835..460837,
460946..460948,460952..460954)
/gene="fbaA"
/locus_tag="BbuZS7_0451"
/note="Na+ binding site [ion binding]; other site"
/db_xref="CDD:29572"
gene complement(461342..461554)
/locus_tag="BbuZS7_0452"
/db_xref="GeneID:7106350"
CDS complement(461342..461554)
/locus_tag="BbuZS7_0452"
/note="identified by glimmer"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374957.1"
/db_xref="GI:218249748"
/db_xref="GeneID:7106350"
/translation="MEFFKILLFFQEIKSQNLKQNAFLKFKKILLINYFFNQNSLINT
AFNNNFKNKLIYYSGFEKINKKIPDK"
gene complement(461616..463376)
/gene="aspS"
/locus_tag="BbuZS7_0453"
/db_xref="GeneID:7106921"
CDS complement(461616..463376)
/gene="aspS"
/locus_tag="BbuZS7_0453"
/EC_number="6.1.1.12"
/note="catalyzes a two-step reaction, first charging an
aspartate molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA; contains discriminating
and non-discriminating subtypes"
/codon_start=1
/transl_table=11
/product="aspartyl-tRNA synthetase"
/protein_id="YP_002374958.1"
/db_xref="GI:218249506"
/db_xref="GeneID:7106921"
/translation="MFKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYE
KAQVLVNEEKLLKIAEKIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIIS
KCNELPFMIEDDNNASENSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLE
LETPTFVKSTPEGARDFVIPSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYR
DEDSRGDRQPEFTQLDLEMSFVKKENIFKLIENMLFLIFKNCININLPKKFKKITYKK
AMNKYGSDKPDTRFELELQDISRNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRA
KINNLEEIAKLYKTQGLYFTKIENNKFSGGIAKFLKTEEQELIKTYSLENNDIIFFTA
NNNWETACKAMGQIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFS
LPKKQYIANLEKNPKKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKS
EDRFGFFLKALEYGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSP
SKISNEQLKELGINIVDGDN"
misc_feature complement(461631..463376)
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="aspartyl-tRNA synthetase; Validated; Region: aspS;
PRK00476"
/db_xref="CDD:179042"
misc_feature complement(462972..463358)
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="EcAspRS_like_N: N-terminal, anticodon recognition
domain of the type found in Escherichia coli aspartyl-tRNA
synthetase (AspRS), the human mitochondrial (mt) AspRS-2,
the discriminating (D) Thermus thermophilus AspRS-1, and
the nondiscriminating (ND)...; Region: EcAspRS_like_N;
cd04317"
/db_xref="CDD:58587"
misc_feature complement(order(463062..463067,463071..463073,
463251..463253,463305..463307))
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:58587"
misc_feature complement(order(463053..463055,463101..463103,
463128..463130,463146..463148,463182..463184,
463236..463238,463269..463271,463284..463292,
463296..463298))
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="anticodon binding site; other site"
/db_xref="CDD:58587"
misc_feature complement(<462531..462962)
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="Asp tRNA synthetase (aspRS) class II core domain.
Class II assignment is based upon its structure and the
presence of three characteristic sequence motifs. AspRS is
a homodimer, which attaches a specific amino acid to the
3' OH group of ribose of the...; Region: AspRS_core;
cd00777"
/db_xref="CDD:73228"
misc_feature complement(order(462645..462647,462660..462662,
462690..462692,462720..462722,462732..462734,
462750..462755,462762..462767,462810..462821,
462831..462845,462852..462854,462873..462893,
462897..462908,462915..462917,462924..462929,
462936..462938,462945..462953))
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:73228"
misc_feature complement(462873..462887)
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="motif 1; other site"
/db_xref="CDD:73228"
misc_feature complement(order(462681..462683,462687..462689,
462696..462704,462717..462719,462723..462725,
462780..462782,462789..462791,462795..462797,
462855..462863))
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="active site"
/db_xref="CDD:73228"
misc_feature complement(462717..462728)
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="motif 2; other site"
/db_xref="CDD:73228"
misc_feature complement(462168..462452)
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="GAD domain; Region: GAD; pfam02938"
/db_xref="CDD:145868"
misc_feature complement(461709..>462113)
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="Asp tRNA synthetase (aspRS) class II core domain.
Class II assignment is based upon its structure and the
presence of three characteristic sequence motifs. AspRS is
a homodimer, which attaches a specific amino acid to the
3' OH group of ribose of the...; Region: AspRS_core;
cd00777"
/db_xref="CDD:73228"
misc_feature complement(461772..461783)
/gene="aspS"
/locus_tag="BbuZS7_0453"
/note="motif 3; other site"
/db_xref="CDD:73228"
gene complement(463380..465485)
/locus_tag="BbuZS7_0454"
/db_xref="GeneID:7106583"
CDS complement(463380..465485)
/locus_tag="BbuZS7_0454"
/note="identified by match to protein family HMM PF00999"
/codon_start=1
/transl_table=11
/product="Na+/H+ antiporter"
/protein_id="YP_002374959.1"
/db_xref="GI:218249614"
/db_xref="GeneID:7106583"
/translation="MNKKIFYITILLHLPNLLFSYSTRYDIEVKMSAFVMSLAIIVIS
SISIGNLVAKLGIPKVIGQITAGIILSPNAFGKIQIPLLFPLGITQIGENYLINEKIF
AISTIASIILLFTAGLETDLKLFIKFLPRGGIIGITEVVGTFTSFVLMASIIFNVPLI
SPTSLFIGIIGTPTSAGIAASILSAKKKMSTSEGVTIISTSIIDDVLSMLMLTSVITI
SRSISDLDIASSIKAIVQNIVIWLCLTFSLIYISETLSRLLKKLNSVTLATVITLSLA
LTIASIFQNLGMSFVVGAYVFGLAMSKTDIVYVIQDKLTIFERFFIPIFFTSIGLMSD
INEILSKEVLILGLAISAIAIITKSIFCFIPALFLGFNKLGALKIATGMVPRGEVSLI
MANVALSSGFISQKIFGIIIIMVFLPTIIATPIINFLFKINKSGLKKELPIDQNTHIC
VSFEYDNLAKILIWDFKNELRKEGFFTQQIKNDSSQYINARKNNISFSIKREGSKITF
ECPNNHLIIIQDLFRETILNLEKITKEVETVSLRAKKLDYSINYDKILSNINLNKRIK
KENIILELKSSNKADVIRELLSVINIEIDKERIFQDLMEREKLITTALKEGFAIPHLK
TNLISKIHIAIGISHEGIDFNALDKNLSHVFILILCPAKDYVSYPRILASVVGKVDLY
KKEILNAKTDKEIYNIIVS"
misc_feature complement(464163..465395)
/locus_tag="BbuZS7_0454"
/note="Kef-type K+ transport systems, membrane components
[Inorganic ion transport and metabolism]; Region: KefB;
COG0475"
/db_xref="CDD:30823"
misc_feature complement(464208..465341)
/locus_tag="BbuZS7_0454"
/note="Sodium/hydrogen exchanger family; Region:
Na_H_Exchanger; pfam00999"
/db_xref="CDD:201544"
misc_feature complement(463785..464108)
/locus_tag="BbuZS7_0454"
/note="Sexual stage antigen s48/45 domain; Region: s48_45;
smart00970"
/db_xref="CDD:198038"
misc_feature complement(463389..463793)
/locus_tag="BbuZS7_0454"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cd00211"
/db_xref="CDD:29266"
misc_feature complement(order(463620..463622,463668..463670))
/locus_tag="BbuZS7_0454"
/note="active site"
/db_xref="CDD:29266"
misc_feature complement(463620..463622)
/locus_tag="BbuZS7_0454"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29266"
gene complement(465488..465763)
/locus_tag="BbuZS7_0455"
/db_xref="GeneID:7106072"
CDS complement(465488..465763)
/locus_tag="BbuZS7_0455"
/note="identified by match to protein family HMM PF00381;
match to protein family HMM TIGR01003"
/codon_start=1
/transl_table=11
/product="phosphocarrier protein HPr"
/protein_id="YP_002374960.1"
/db_xref="GI:218249571"
/db_xref="GeneID:7106072"
/translation="MQEVEIEIINKDGIHSRSANIIAELANKHSSCDIKITTKDGRKA
DAKSTIEIIILGIIYKEKIKITVVGKKEKLAIKNLLNLLKYNFSKEL"
misc_feature complement(<465620..465751)
/locus_tag="BbuZS7_0455"
/note="Histidine-containing phosphocarrier protein
(HPr)-like proteins. HPr is a central component of the
bacterial phosphoenolpyruvate sugar phosphotransferase
system (PTS). The PTS catalyses the phosphorylation of
sugar substrates during their translocation...; Region:
PTS-HPr_like; cd00367"
/db_xref="CDD:29444"
misc_feature complement(465740..465751)
/locus_tag="BbuZS7_0455"
/note="dimerization domain swap beta strand [polypeptide
binding]; other site"
/db_xref="CDD:29444"
misc_feature complement(order(465620..465625,465683..465685,
465692..465694,465704..465709,465713..465718,
465722..465724))
/locus_tag="BbuZS7_0455"
/note="regulatory protein interface [polypeptide binding];
other site"
/db_xref="CDD:29444"
misc_feature complement(465719..465721)
/locus_tag="BbuZS7_0455"
/note="active site"
/db_xref="CDD:29444"
misc_feature complement(465620..465622)
/locus_tag="BbuZS7_0455"
/note="regulatory phosphorylation site [posttranslational
modification]; other site"
/db_xref="CDD:29444"
gene complement(465776..466069)
/locus_tag="BbuZS7_0456"
/db_xref="GeneID:7106821"
CDS complement(465776..466069)
/locus_tag="BbuZS7_0456"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002374961.1"
/db_xref="GI:218249236"
/db_xref="GeneID:7106821"
/translation="MEPKIQTVNYSLNENEKNFILKKLEKFDTHIKKHIDNLKITIKK
EHELFKLDAHIHFNWGKIIHIREDGKILLNLIDSAIARLYKTATKEKEKKNNK"
misc_feature complement(<465818..466069)
/locus_tag="BbuZS7_0456"
/note="Ribosome-associated protein Y (PSrp-1)
[Translation, ribosomal structure and biogenesis]; Region:
COG1544"
/db_xref="CDD:31733"
gene complement(466059..467318)
/gene="rpoN"
/locus_tag="BbuZS7_0457"
/db_xref="GeneID:7106777"
CDS complement(466059..467318)
/gene="rpoN"
/locus_tag="BbuZS7_0457"
/note="identified by match to protein family HMM PF00309;
match to protein family HMM PF04552; match to protein
family HMM PF04963; match to protein family HMM TIGR02395"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma-54 facto 