LOCUS NC_012581 5230115 bp DNA circular BCT 23-DEC-2012
DEFINITION Bacillus anthracis str. CDC 684 chromosome, complete genome.
ACCESSION NC_012581
VERSION NC_012581.1 GI:227812678
DBLINK Project: 59303
BioProject: PRJNA59303
KEYWORDS .
SOURCE Bacillus anthracis str. CDC 684
ORGANISM Bacillus anthracis str. CDC 684
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus;
Bacillus cereus group.
REFERENCE 1 (bases 1 to 5230115)
AUTHORS Dodson,R.J., Munk,A.C., Brettin,T., Bruce,D., Detter,C., Tapia,R.,
Han,C., Sutton,G. and Sims,D.
TITLE Genome sequence of Bacillus anthracis str. CDC 684
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5230115)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (20-APR-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5230115)
AUTHORS Dodson,R.J., Munk,A.C., Brettin,T., Bruce,D., Detter,C., Tapia,R.,
Han,C., Sutton,G. and Sims,D.
TITLE Direct Submission
JOURNAL Submitted (27-OCT-2008) Los Alamos National Laboratory, Los Alamos,
NM, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP001215.
DNA Source: Karen Hill, khill@lanl.gov.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..5230115
/organism="Bacillus anthracis str. CDC 684"
/mol_type="genomic DNA"
/strain="CDC 684"
/db_xref="taxon:568206"
/note="also known as NRRL 3495 and NRS 234"
gene 281..1621
/gene="dnaA"
/locus_tag="BAMEG_0001"
/db_xref="GeneID:7785766"
CDS 281..1621
/gene="dnaA"
/locus_tag="BAMEG_0001"
/note="binds to the dnaA-box as an ATP-bound complex at
the origin of replication during the initiation of
chromosomal replication; can also affect transcription of
multiple genes including itself."
/codon_start=1
/transl_table=11
/product="chromosomal replication initiation protein"
/protein_id="YP_002812688.1"
/db_xref="GI:227812679"
/db_xref="GeneID:7785766"
/translation="MENISDLWNSALKELEKKVSKPSYETWLKSTTAHNLKKDVLTIT
APNEFARDWLESHYSELISETLYDLTGAKLAIRFIIPQSQAEEEIDLPPAKPNAAQDD
SNHLPQSMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHL
MHAIGHYVIEHNPNAKVVYLSSEKFTNEFINSIRDNKAVDFRNKYRNVDVLLIDDIQF
LAGKEQTQEEFFHTFNALHEESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPP
DLETRIAILRKKAKAEGLDIPNEVMLYIANQIDSNIRELEGALIRVVAYSSLINKDIN
ADLAAEALKDIIPNSKPKIISIYDIQKAVGDVYQVKLEDFKAKKRTKSVAFPRQIAMY
LSRELTDSSLPKIGEEFGGRDHTTVIHAHEKISKLLKTDTQLQKQVEEINDILK"
misc_feature 287..1618
/gene="dnaA"
/locus_tag="BAMEG_0001"
/note="chromosomal replication initiation protein;
Reviewed; Region: dnaA; PRK00149"
/db_xref="CDD:178902"
misc_feature 293..478
/gene="dnaA"
/locus_tag="BAMEG_0001"
/note="DnaA N-terminal domain; Region: DnaA_N; pfam11638"
/db_xref="CDD:204696"
misc_feature 653..1087
/gene="dnaA"
/locus_tag="BAMEG_0001"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 731..754
/gene="dnaA"
/locus_tag="BAMEG_0001"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(734..757,920..922,1019..1021)
/gene="dnaA"
/locus_tag="BAMEG_0001"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 908..925
/gene="dnaA"
/locus_tag="BAMEG_0001"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 1058..1060
/gene="dnaA"
/locus_tag="BAMEG_0001"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 1352..1615
/gene="dnaA"
/locus_tag="BAMEG_0001"
/note="C-terminal domain of bacterial DnaA proteins. The
DNA-binding C-terminal domain of DnaA contains a
helix-turn-helix motif that specifically interacts with
the DnaA box, a 9-mer motif that occurs repetitively in
the replication origin oriC. Multiple...; Region:
Bac_DnaA_C; cd06571"
/db_xref="CDD:119330"
misc_feature order(1415..1417,1439..1444,1463..1465,1481..1489,
1514..1528,1535..1537,1544..1549)
/gene="dnaA"
/locus_tag="BAMEG_0001"
/note="DnaA box-binding interface [nucleotide binding];
other site"
/db_xref="CDD:119330"
gene 1800..2939
/gene="dnaN1"
/locus_tag="BAMEG_0002"
/db_xref="GeneID:7782761"
CDS 1800..2939
/gene="dnaN1"
/locus_tag="BAMEG_0002"
/EC_number="2.7.7.7"
/note="binds the polymerase to DNA and acts as a sliding
clamp"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit beta"
/protein_id="YP_002812689.1"
/db_xref="GI:227812680"
/db_xref="GeneID:7782761"
/translation="MRFSIQKDYLVRSVQDVMKAVSFRTTIPILTGIKVVATEEGVTL
TGSDADISIESFIPVEEDGKEIVEVKQSGSIVLQAKYFSEIVKKLPKETVEISVENHL
MTKITSGKSEFNLNGLDSAEYPLLPQIEEHHVFKIPTDLLKHMIRQTVFAVSTSETRP
ILTGVNWKVYNSELTCIATDSHRLALRKAKIEGIVDEFQANVVIPGKSLNELSKILDE
SEEMVDIVITEYQVLFRTKHLLFFSRLLEGNYPDTTRLIPAESKTDIFVNTKEFLQAI
DRASLLARDGRNNVVKLSTLEQAMLEISSNSPEIGKVVEEVQCEKVDGEELKISFSAK
YMMDALKALDSTEIKISFTGAMRPFLIRTVNDESIIQLILPVRTY"
misc_feature 1800..2933
/gene="dnaN1"
/locus_tag="BAMEG_0002"
/note="DNA polymerase III subunit beta; Validated; Region:
PRK05643"
/db_xref="CDD:180180"
misc_feature 1800..2930
/gene="dnaN1"
/locus_tag="BAMEG_0002"
/note="Beta clamp domain. The beta subunit (processivity
factor) of DNA polymerase III holoenzyme, refered to as
the beta clamp, forms a ring shaped dimer that encircles
dsDNA (sliding clamp) in bacteria. The beta-clamp is
structurally similar to the trimeric...; Region:
beta_clamp; cd00140"
/db_xref="CDD:29053"
misc_feature order(1869..1871,2037..2039,2058..2060,2418..2420)
/gene="dnaN1"
/locus_tag="BAMEG_0002"
/note="putative DNA binding surface [nucleotide binding];
other site"
/db_xref="CDD:29053"
misc_feature order(2040..2042,2049..2051,2127..2129,2133..2135,
2640..2642,2739..2744)
/gene="dnaN1"
/locus_tag="BAMEG_0002"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29053"
misc_feature order(2334..2336,2340..2351,2793..2795,2919..2930)
/gene="dnaN1"
/locus_tag="BAMEG_0002"
/note="beta-clamp/clamp loader binding surface; other
site"
/db_xref="CDD:29053"
misc_feature order(2334..2336,2340..2345,2565..2567,2673..2675,
2715..2720,2802..2804,2919..2930)
/gene="dnaN1"
/locus_tag="BAMEG_0002"
/note="beta-clamp/translesion DNA polymerase binding
surface; other site"
/db_xref="CDD:29053"
gene 3067..3279
/locus_tag="BAMEG_0003"
/db_xref="GeneID:7784757"
CDS 3067..3279
/locus_tag="BAMEG_0003"
/note="identified by match to protein family HMM
TIGR02988"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812690.1"
/db_xref="GI:227812681"
/db_xref="GeneID:7784757"
/translation="MKRIKISTEYITLGQFLKLADVIDTGGAVKWFLQEYEVYVNQEL
ENRRGRKLYANDIIEIPGSGSFQVQS"
misc_feature 3073..3249
/locus_tag="BAMEG_0003"
/note="S4 domain protein YaaA; Region: YaaA_near_RecF;
TIGR02988"
/db_xref="CDD:132033"
gene 3292..4419
/gene="recF"
/locus_tag="BAMEG_0004"
/db_xref="GeneID:7784700"
CDS 3292..4419
/gene="recF"
/locus_tag="BAMEG_0004"
/note="Required for DNA replication; binds preferentially
to single-stranded, linear DNA"
/codon_start=1
/transl_table=11
/product="recombination protein F"
/protein_id="YP_002812691.1"
/db_xref="GI:227812682"
/db_xref="GeneID:7784700"
/translation="MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIY
VLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSSLSLELNISKKGKKAKLNQLEQQ
KLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILRKRFEFLHLLQEWAAPIHRGISRGL
EELEIVYKPSVDVSESMDLSKIKEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNS
KNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLSELDDYRQSHLLNTI
QGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA"
misc_feature 3292..4395
/gene="recF"
/locus_tag="BAMEG_0004"
/note="recombination protein F; Reviewed; Region: recF;
PRK00064"
/db_xref="CDD:178835"
misc_feature 3298..>3786
/gene="recF"
/locus_tag="BAMEG_0004"
/note="ATP-binding cassette domain of RecF; Region:
ABC_RecF; cd03242"
/db_xref="CDD:213209"
misc_feature 3379..3402
/gene="recF"
/locus_tag="BAMEG_0004"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213209"
misc_feature order(3388..3393,3397..3405,3592..3594)
/gene="recF"
/locus_tag="BAMEG_0004"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213209"
misc_feature 3583..3594
/gene="recF"
/locus_tag="BAMEG_0004"
/note="Q-loop/lid; other site"
/db_xref="CDD:213209"
misc_feature <3946..4395
/gene="recF"
/locus_tag="BAMEG_0004"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
misc_feature 4138..4167
/gene="recF"
/locus_tag="BAMEG_0004"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature 4225..4242
/gene="recF"
/locus_tag="BAMEG_0004"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature 4249..4260
/gene="recF"
/locus_tag="BAMEG_0004"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature 4315..4335
/gene="recF"
/locus_tag="BAMEG_0004"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene 4458..6380
/gene="gyrB"
/locus_tag="BAMEG_0005"
/db_xref="GeneID:7782634"
CDS 4458..6380
/gene="gyrB"
/locus_tag="BAMEG_0005"
/EC_number="5.99.1.3"
/note="negatively supercoils closed circular
double-stranded DNA"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit B"
/protein_id="YP_002812692.1"
/db_xref="GI:227812683"
/db_xref="GeneID:7782634"
/translation="MEQKQMQENSYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHL
VWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTV
LHAGGKFGGGGYKVSGGLHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLK
VIGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIEDKREHKQ
KKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQYNEGYTNNIYSFT
NNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHP
NPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAK
KARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAIL
PLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGGDFDIEKARYHKVIIMTDADVDG
AHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAELPA
QPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR
RNFIQENAKYVKNLDI"
misc_feature 4467..6377
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="DNA gyrase subunit B; Validated; Region: gyrB;
PRK05644"
/db_xref="CDD:180181"
misc_feature 4578..>4739
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature 4608..4610
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(4695..4697,4701..4703)
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 5133..5597
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
a ribosomal S5 domain 2-like fold, of the type found in
proteins of the type IIA family of DNA topoisomerases
similar to the B subunits of E. coli DNA gyrase and E.
coli Topoisomerase IV which are; Region:
TopoII_Trans_DNA_gyrase; cd00822"
/db_xref="CDD:48467"
misc_feature 5286..5288
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="anchoring element; other site"
/db_xref="CDD:48467"
misc_feature order(5460..5462,5469..5474,5478..5480)
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48467"
misc_feature order(5478..5480,5484..5486)
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:48467"
misc_feature 5727..6068
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in proteins of the type IIA family of DNA topoisomerases
similar to the Escherichia coli GyrB subunit. TopoIIA
enzymes cut both strands of the...; Region:
TOPRIM_TopoIIA_GyrB; cd03366"
/db_xref="CDD:173786"
misc_feature order(5745..5750,5757..5759,5964..5966,5970..5972,
5976..5978)
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="active site"
/db_xref="CDD:173786"
misc_feature order(5745..5747,5964..5966)
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173786"
misc_feature 6159..6344
/gene="gyrB"
/locus_tag="BAMEG_0005"
/note="DNA gyrase B subunit, carboxyl terminus; Region:
DNA_gyraseB_C; pfam00986"
/db_xref="CDD:201537"
gene 6469..8940
/gene="gyrA"
/locus_tag="BAMEG_0006"
/db_xref="GeneID:7787306"
CDS 6469..8940
/gene="gyrA"
/locus_tag="BAMEG_0006"
/EC_number="5.99.1.3"
/note="negatively supercoils closed circular
double-stranded DNA"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit A"
/protein_id="YP_002812693.1"
/db_xref="GI:227812684"
/db_xref="GeneID:7787306"
/translation="MSDNQQQARIREINISHEMRTSFLDYAMSVIVSRALPDVRDGLK
PVHRRVLYAMNDLGITADKAYKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSQRY
MLVDGHGNFGSVDGDSAAAMRYTEARMSKISMELIRDISKNTIDYQDNYDGSEREPIV
LPARFPNLLVNGTTGIAVGMATNIPPHQLGEVIDGVLALSHNPDITIAELMECIPGPD
FPTAGLILGRSGIRRAYETGRGSIILRAKVEIEEKSNGKQSIIVTELPYQVNKARLIE
KIAELVRDKKIEGITDLRDESDRNGMRIVMEVRRDANANVLLNNLYKHTALQTSFGIN
MLSLVNGEPQVLNLKQNLYHYLEHQKVVIRRRTAYELEKAEARAHILEGLRIALDHLD
EVITLIRSSKTAEIAKQGLMERFGLSEKQAQAILDMRLQRLTGLEREKIEQEYQDLMK
LIAELKAILADEEKVLEIIREELTEVKERFNDKRRTEITIGGMESIEDEDLIPEQNIA
ITLTHNGYIKRLPASTYKTQNRGGRGVQGMGTNDDDFVEHLLTTSTHDHILFFTNKGK
VYRTKGYEIPEYSRTAKGIPIINLLGVDKGEWINAIIPIREFGDDEFLFFTTKQGISK
RTPLSSFANIRTNGLIAISLREEDEVISVRLTSGDKDIIVGTSNGMLIRFNEQDVRSM
GRNAAGVKAITLGEEDQVVGMEIVEEDVNVLIVTKNGYGKRTPIDEYRLQSRGGKGLK
TCNITDKNGKLVAVKSVTGEEDIMLITAAGVIIRMPVDQISQMGRNTQGVRLIRLEDE
QEVATVAKAQKDDEEETSEEVSSEE"
misc_feature 6484..8901
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="DNA gyrase subunit A; Validated; Region: PRK05560"
/db_xref="CDD:180128"
misc_feature 6562..7896
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="DNA Topoisomerase, subtype IIA; domain A';
bacterial DNA topoisomerase IV (C subunit, ParC),
bacterial DNA gyrases (A subunit, GyrA),mammalian DNA
toposiomerases II. DNA topoisomerases are essential
enzymes that regulate the conformational changes in
DNA...; Region: TOP4c; cd00187"
/db_xref="CDD:29149"
misc_feature order(6562..6645,6658..6807,6811..6867,6871..6942,
6949..6951)
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="CAP-like domain; other site"
/db_xref="CDD:29149"
misc_feature 6838..6840
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="active site"
/db_xref="CDD:29149"
misc_feature order(7633..7641,7648..7659,7690..7695,7735..7785)
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="primary dimer interface [polypeptide binding];
other site"
/db_xref="CDD:29149"
misc_feature 7993..8127
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature 8134..8286
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature 8302..8439
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature 8446..8589
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature 8599..8742
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature 8749..8889
/gene="gyrA"
/locus_tag="BAMEG_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
gene 9207..10715
/gene="rrs_1"
/locus_tag="BAMEG_0007"
/db_xref="GeneID:7781987"
rRNA 9207..10715
/gene="rrs_1"
/locus_tag="BAMEG_0007"
/product="16S ribosomal RNA"
/db_xref="GeneID:7781987"
gene 10865..10943
/locus_tag="BAMEG_0008"
/db_xref="GeneID:7785656"
tRNA 10865..10943
/locus_tag="BAMEG_0008"
/product="tRNA-Ile"
/db_xref="GeneID:7785656"
gene 10950..11027
/locus_tag="BAMEG_0009"
/db_xref="GeneID:7785717"
tRNA 10950..11027
/locus_tag="BAMEG_0009"
/product="tRNA-Ala"
/db_xref="GeneID:7785717"
gene 11121..14028
/gene="rrl_1"
/locus_tag="BAMEG_0011"
/db_xref="GeneID:7785740"
rRNA 11121..14028
/gene="rrl_1"
/locus_tag="BAMEG_0011"
/product="23S ribosomal RNA"
/db_xref="GeneID:7785740"
gene 14077..14192
/gene="rrf_1"
/locus_tag="BAMEG_0012"
/db_xref="GeneID:7785639"
rRNA 14077..14192
/gene="rrf_1"
/locus_tag="BAMEG_0012"
/product="5S ribosomal RNA"
/db_xref="GeneID:7785639"
gene complement(14227..15171)
/locus_tag="BAMEG_0013"
/db_xref="GeneID:7785641"
CDS complement(14227..15171)
/locus_tag="BAMEG_0013"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812694.1"
/db_xref="GI:227812685"
/db_xref="GeneID:7785641"
/translation="MYNVILPVVMKNPPYKMLKKSFENCYPFIYYLEHGKNYYELYKV
APFSIQPMLLFYGISQLFKACLLTIDPNYPESTTVLAHGVTTRKRKKQGYQFLEDEVK
VQKNGLFTHVAEQLFHMKHLESEKFNMLDLMGNIPELQNLFRYSQRGATLYKIDSPNT
NELSFSVNILDRLHMTTERFSRYIESICKHLSIQHVPRKTSASNLLFTAPIQSWNPIY
STPLYYEYLADTYYLPLTTDPRNPKPALPELLVHYLLLYNLSMISRYETDWWYDLLGS
YGSEDYPFIYQFLTISAQKVPYYISSFLLAEPGLFHGK"
misc_feature complement(14260..15117)
/locus_tag="BAMEG_0013"
/note="YaaC-like Protein; Region: YaaC; pfam14175"
/db_xref="CDD:206343"
gene 15342..16805
/gene="guaB"
/locus_tag="BAMEG_0014"
/db_xref="GeneID:7787472"
CDS 15342..16805
/gene="guaB"
/locus_tag="BAMEG_0014"
/EC_number="1.1.1.205"
/note="catalyzes the synthesis of xanthosine monophosphate
by the NAD+ dependent oxidation of inosine monophosphate"
/codon_start=1
/transl_table=11
/product="inosine 5'-monophosphate dehydrogenase"
/protein_id="YP_002812695.1"
/db_xref="GI:227812686"
/db_xref="GeneID:7787472"
/translation="MWESKFVKEGLTFDDVLLVPAKSDVLPREVSVKTVLSESLQLNI
PLISAGMDTVTEADMAIAMARQGGLGIIHKNMSIEQQAEQVDKVKRSESGVISDPFFL
TPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQDYSIKISDVMTKE
QLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQ
GRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNI
IAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKH
GIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMG
SVGAMEKGSKDRYFQEGNKKLVPEGIEGRVPYKGPLADTVHQLVGGLRAGMGYCGAQD
LEFLRENAQFIRMSGAGLLESHPHHVQITKEAPNYSL"
misc_feature 15348..16802
/gene="guaB"
/locus_tag="BAMEG_0014"
/note="inosine 5'-monophosphate dehydrogenase; Reviewed;
Region: PRK05567"
/db_xref="CDD:180134"
misc_feature 15369..>15608
/gene="guaB"
/locus_tag="BAMEG_0014"
/note="TIM barrel proteins share a structurally conserved
phosphate binding motif and in general share an eight
beta/alpha closed barrel structure. Specific for this
family is the conserved phosphate binding site at the
edges of strands 7 and 8. The phosphate...; Region:
TIM_phosphate_binding; cl09108"
/db_xref="CDD:214149"
misc_feature 15627..15959
/gene="guaB"
/locus_tag="BAMEG_0014"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains in the
inosine 5' monophosphate dehydrogenase (IMPDH) protein.
IMPDH is an essential enzyme that catalyzes the first step
unique to GTP synthesis, playing a key...; Region:
CBS_pair_IMPDH; cd04601"
/db_xref="CDD:73101"
misc_feature <15993..16730
/gene="guaB"
/locus_tag="BAMEG_0014"
/note="IMPDH: The catalytic domain of the inosine
monophosphate dehydrogenase. IMPDH catalyzes the
NAD-dependent oxidation of inosine 5'-monophosphate (IMP)
to xanthosine 5' monophosphate (XMP). It is a
rate-limiting step in the de novo synthesis of the
guanine...; Region: IMPDH; cd00381"
/db_xref="CDD:73364"
misc_feature order(16257..16265,16362..16364,16368..16370,16431..16436,
16503..16505,16509..16517,16587..16592)
/gene="guaB"
/locus_tag="BAMEG_0014"
/note="active site"
/db_xref="CDD:73364"
gene 16910..18226
/gene="dacA"
/locus_tag="BAMEG_0015"
/db_xref="GeneID:7784623"
CDS 16910..18226
/gene="dacA"
/locus_tag="BAMEG_0015"
/EC_number="3.4.16.4"
/note="identified by match to protein family HMM PF00768;
match to protein family HMM PF07943"
/codon_start=1
/transl_table=11
/product="serine-type D-Ala-D-Ala carboxypeptidase DacA"
/protein_id="YP_002812696.1"
/db_xref="GI:227812687"
/db_xref="GeneID:7784623"
/translation="MKGMFCKRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAA
ILVEANSGKILYQKNADELLSIASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKV
SQDASLSNVALENGGSYTVKELYEAMAIFSANGATIALAEAIAGKEVDFVKMMNDKSK
ELGLKNYKFVNSTGLTNKDLKGMHPEGTTADEENKMSAKDVATLAQHLIKDYPKVLDT
AKIPKKEFRPEKEKFAMSNWNWMLKGLVKEYDGVDGLKTGSTPEAGDCFTGTVERNGM
RFISVVIKTSSHTARFDETKKLYDYGFANFEMKQMYKKGSSVKGQETVRVENAKDKDV
AVQTKQAISLPVPKGSKEVYKTELKESSKGQEAPIKKGAALGQMVITPKDTNDPGFLT
GKSLQVDLVTTSEVEEANWFTRAMRGIGSFFSGIWNSAVDTVKGWF"
misc_feature 16928..18223
/gene="dacA"
/locus_tag="BAMEG_0015"
/note="D-alanyl-D-alanine carboxypeptidase [Cell envelope
biogenesis, outer membrane]; Region: DacC; COG1686"
/db_xref="CDD:31872"
misc_feature 17084..17755
/gene="dacA"
/locus_tag="BAMEG_0015"
/note="Beta-lactamase enzyme family; Region:
Beta-lactamase2; pfam13354"
/db_xref="CDD:205534"
misc_feature 17825..18133
/gene="dacA"
/locus_tag="BAMEG_0015"
/note="Penicillin-binding protein 5, C-terminal domain;
Region: PBP5_C; smart00936"
/db_xref="CDD:198004"
gene 18387..19274
/locus_tag="BAMEG_0016"
/db_xref="GeneID:7783847"
CDS 18387..19274
/locus_tag="BAMEG_0016"
/note="with PdxT forms pyridoxal 5'-phosphate from
glutamine, either ribose 5-phosphate or ribulose
5-phosphate, and either glyceraldehyde 3-phosphate or
dihydroxyacetone phosphate"
/codon_start=1
/transl_table=11
/product="pyridoxal biosynthesis lyase PdxS"
/protein_id="YP_002812697.1"
/db_xref="GI:227812688"
/db_xref="GeneID:7783847"
/translation="MTNVTGTERVKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAIM
ALERVPADIRAAGGVSRMADPTIVEEVMGAVSIPVMAKCRIGHLVEARVLESLGVDYI
DESEVLTPADEVYHLNKRDYTVPFVCGCRDIGEAARRIAEGASMLRTKGEPGTGNIVE
AVRHMRQVNAEIRQVASLREDELMTYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVAT
PADAALMMQLGADGVFVGSGIFKSENPAKFARAIVEATTHYEDYELIASLSKGLGNAM
KGIEISTLLPEQRMQERGW"
misc_feature 18420..19268
/locus_tag="BAMEG_0016"
/note="PdxS is a subunit of the pyridoxal 5'-phosphate
(PLP) synthase, an important enzyme in deoxyxylulose
5-phosphate (DXP)-independent pathway for de novo
biosynthesis of PLP, present in some eubacteria, in
archaea, fungi, plants, plasmodia, and some...; Region:
pdxS; cd04727"
/db_xref="CDD:73389"
misc_feature order(18459..18461,18516..18518,18630..18632,18846..18854,
19029..19031,19086..19088)
/locus_tag="BAMEG_0016"
/note="active site"
/db_xref="CDD:73389"
misc_feature order(18561..18563,18567..18569,18591..18593,18636..18638,
18645..18653,18660..18662,18711..18725,18849..18857,
18861..18863,18870..18875,18882..18884,19035..19037,
19044..19049,19170..19172)
/locus_tag="BAMEG_0016"
/note="multimer interface [polypeptide binding]; other
site"
/db_xref="CDD:73389"
gene 19293..19883
/locus_tag="BAMEG_0017"
/db_xref="GeneID:7785147"
CDS 19293..19883
/locus_tag="BAMEG_0017"
/note="with PdxST is involved in the biosynthesis of
pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of
glutamine to glutamate and ammonia; PdxS utilizes the
ammonia to synthesize pyridoxal 5'-phosphate"
/codon_start=1
/transl_table=11
/product="glutamine amidotransferase subunit PdxT"
/protein_id="YP_002812698.1"
/db_xref="GI:227812689"
/db_xref="GeneID:7785147"
/translation="MVKIGVLGLQGAVREHVKSVEASGAEAVVVKRIEQLEEIDGLIL
PGGESTTMRRLIDKYDFMEPLRTFAKSGKPMFGTCAGMILLAKTLIGYDEAHIGAMDI
TVERNAFGRQKDSFEAALSIKGVGEDFVGVFIRAPYVVDVADDVEVLSTHGDRMVAVK
QGPFLAASFHPELTDDHRVTAYFVEMVKEAKMKKVV"
misc_feature 19302..19841
/locus_tag="BAMEG_0017"
/note="Glutamine Amidotransferase (GATase_I) involved in
pyridoxine biosynthesis; Region: GATase1_PB; cd01749"
/db_xref="CDD:153220"
misc_feature order(19428..19436,19527..19529,19608..19610,19692..19697,
19800..19802,19806..19808)
/locus_tag="BAMEG_0017"
/note="predicted active site [active]"
/db_xref="CDD:153220"
misc_feature order(19527..19529,19800..19802,19806..19808)
/locus_tag="BAMEG_0017"
/note="catalytic triad [active]"
/db_xref="CDD:153220"
gene 20211..21485
/gene="serS"
/locus_tag="BAMEG_0018"
/db_xref="GeneID:7785296"
CDS 20211..21485
/gene="serS"
/locus_tag="BAMEG_0018"
/EC_number="6.1.1.11"
/note="catalyzes a two-step reaction, first charging a
serine molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="seryl-tRNA synthetase"
/protein_id="YP_002812699.1"
/db_xref="GI:227812690"
/db_xref="GeneID:7785296"
/translation="MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQ
TEELKSKRNEVSQQISVLKREKKDAEALILEMREVGEKVKDLDNELRTVEEDLERLML
SIPNIPHESAPVGETEDDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTG
SRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDA
FRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLI
RQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKK
YDIEVWIPSYGTYREISSCSNFEAFQARRANIRFRREPNGKPEHVHTLNGSGLAIGRT
VAAILENYQQEDGTIIIPEVLRPYMGGKTVIK"
misc_feature 20211..21482
/gene="serS"
/locus_tag="BAMEG_0018"
/note="seryl-tRNA synthetase; Provisional; Region:
PRK05431"
/db_xref="CDD:180077"
misc_feature 20211..20534
/gene="serS"
/locus_tag="BAMEG_0018"
/note="Seryl-tRNA synthetase N-terminal domain; Region:
Seryl_tRNA_N; pfam02403"
/db_xref="CDD:202232"
misc_feature 20568..21461
/gene="serS"
/locus_tag="BAMEG_0018"
/note="Seryl-tRNA synthetase (SerRS) class II core
catalytic domain. SerRS is responsible for the attachment
of serine to the 3' OH group of ribose of the appropriate
tRNA. This domain It is primarily responsible for
ATP-dependent formation of the enzyme bound...; Region:
SerRS_core; cd00770"
/db_xref="CDD:29815"
misc_feature order(20670..20687,20694..20714,20724..20726,20730..20732,
20736..20738,20745..20747,20784..20795,20799..20807,
20811..20813,20865..20870,20874..20876,20886..20888,
20913..20915,20925..20927,20937..20939,20985..20987,
21048..21050,21456..21461)
/gene="serS"
/locus_tag="BAMEG_0018"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29815"
misc_feature order(20691..20693,20901..20903,20907..20909,20994..20996,
21000..21002,21018..21020,21027..21029,21036..21038,
21042..21044,21051..21053,21057..21059,21063..21065,
21255..21266,21357..21359,21363..21365,21381..21383)
/gene="serS"
/locus_tag="BAMEG_0018"
/note="active site"
/db_xref="CDD:29815"
misc_feature 20784..20807
/gene="serS"
/locus_tag="BAMEG_0018"
/note="motif 1; other site"
/db_xref="CDD:29815"
misc_feature 20991..21002
/gene="serS"
/locus_tag="BAMEG_0018"
/note="motif 2; other site"
/db_xref="CDD:29815"
misc_feature order(21366..21374,21381..21383)
/gene="serS"
/locus_tag="BAMEG_0018"
/note="motif 3; other site"
/db_xref="CDD:29815"
gene 21642..21734
/locus_tag="BAMEG_0019"
/db_xref="GeneID:7786103"
tRNA 21642..21734
/locus_tag="BAMEG_0019"
/product="tRNA-Ser"
/db_xref="GeneID:7786103"
gene 21901..22293
/locus_tag="BAMEG_0020"
/db_xref="GeneID:7785714"
CDS 21901..22293
/locus_tag="BAMEG_0020"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812700.1"
/db_xref="GI:227812691"
/db_xref="GeneID:7785714"
/translation="MDLIIQTFPLDGKTLYYVQCPVCKNNRILNSGANVSRIISDDTF
RKLCGCTCDVKQTATKVEAPKKVKKEAVKKEAAPKRTGKVLTAVINGKEMTVKEIAEA
YDISTSTVRQRINAGKSESEIIAPTKKK"
misc_feature 21907..22065
/locus_tag="BAMEG_0020"
/note="Domain of unknown function (DUF3797); Region:
DUF3797; pfam12677"
/db_xref="CDD:205012"
misc_feature <22171..22242
/locus_tag="BAMEG_0020"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cl15761"
/db_xref="CDD:214248"
misc_feature order(22183..22188,22216..22218,22222..22227,22231..22239)
/locus_tag="BAMEG_0020"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene complement(22329..22997)
/locus_tag="BAMEG_0021"
/db_xref="GeneID:7787410"
CDS complement(22329..22997)
/locus_tag="BAMEG_0021"
/EC_number="2.7.1.-"
/note="identified by match to protein family HMM PF01712"
/codon_start=1
/transl_table=11
/product="deoxynucleoside kinase family protein"
/protein_id="YP_002812701.1"
/db_xref="GI:227812692"
/db_xref="GeneID:7787410"
/translation="MNLRQKYDIPNDAVITIAGTVGVGKSTMTTALANALGYRTSFEK
VDSNPYLDKFYADFTRWSFHLQVYFLAERFKEQKRIFEYGGGFVQDRSIYEDTGIFAK
MHHEKGTMTETDYETYKGLFDAMVMTPYFPHPDLLIYLEGSFDDIVDRIQERGRPMEQ
QTPIEYWKEMHGRYENWINNFNSCPVLRLNINEYDILKDGDSIEPIIKKIGHFLKQTR
KLVK"
misc_feature complement(22338..22973)
/locus_tag="BAMEG_0021"
/note="Deoxynucleoside kinases [Nucleotide transport and
metabolism]; Region: COG1428"
/db_xref="CDD:31617"
misc_feature complement(22401..22958)
/locus_tag="BAMEG_0021"
/note="Deoxyribonucleoside kinase (dNK) catalyzes the
phosphorylation of deoxyribonucleosides to yield
corresponding monophosphates (dNMPs). This family consists
of various deoxynucleoside kinases including deoxyribo-
cytidine (EC 2.7.1.74), guanosine (EC 2.7.1; Region: dNK;
cd01673"
/db_xref="CDD:30191"
misc_feature complement(order(22521..22523,22536..22538,22698..22700,
22800..22805,22833..22835,22920..22925,22929..22931))
/locus_tag="BAMEG_0021"
/note="Substrate-binding site [chemical binding]; other
site"
/db_xref="CDD:30191"
misc_feature complement(22779..22781)
/locus_tag="BAMEG_0021"
/note="Substrate specificity [chemical binding]; other
site"
/db_xref="CDD:30191"
gene complement(23000..23635)
/locus_tag="BAMEG_0022"
/db_xref="GeneID:7785329"
CDS complement(23000..23635)
/locus_tag="BAMEG_0022"
/EC_number="2.7.1.-"
/note="identified by match to protein family HMM PF01712"
/codon_start=1
/transl_table=11
/product="deoxynucleoside kinase family protein"
/protein_id="YP_002812702.1"
/db_xref="GI:227812693"
/db_xref="GeneID:7785329"
/translation="MTGVPFITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLG
KFYEDIDEWSFQTEMFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKD
SQYDKYMQIYRILTQDMPVPNVIVYLTASLETLQRRIAMRGREFEKNMDPNYLLQLTK
DYETAMDAFKKDHPDIPVLKFNGDDMDFVKNPDDLNVILSALQNTLLKESK"
misc_feature complement(23018..23623)
/locus_tag="BAMEG_0022"
/note="Deoxynucleoside kinases [Nucleotide transport and
metabolism]; Region: COG1428"
/db_xref="CDD:31617"
misc_feature complement(23060..23620)
/locus_tag="BAMEG_0022"
/note="Deoxyribonucleoside kinase (dNK) catalyzes the
phosphorylation of deoxyribonucleosides to yield
corresponding monophosphates (dNMPs). This family consists
of various deoxynucleoside kinases including deoxyribo-
cytidine (EC 2.7.1.74), guanosine (EC 2.7.1; Region: dNK;
cd01673"
/db_xref="CDD:30191"
misc_feature complement(order(23195..23197,23210..23212,23348..23350,
23462..23467,23495..23497,23582..23587,23591..23593))
/locus_tag="BAMEG_0022"
/note="Substrate-binding site [chemical binding]; other
site"
/db_xref="CDD:30191"
misc_feature complement(23441..23443)
/locus_tag="BAMEG_0022"
/note="Substrate specificity [chemical binding]; other
site"
/db_xref="CDD:30191"
gene complement(23761..24300)
/locus_tag="BAMEG_0023"
/db_xref="GeneID:7786623"
CDS complement(23761..24300)
/locus_tag="BAMEG_0023"
/note="identified by match to protein family HMM PF00857"
/codon_start=1
/transl_table=11
/product="isochorismatase family protein"
/protein_id="YP_002812703.1"
/db_xref="GI:227812694"
/db_xref="GeneID:7786623"
/translation="MKNTALLIIDMINDFQFSHGPILAKKCEMITNPILQLKKTMKSF
GYPIIYINDHYQLWRSDIDQLITHCTNEYSENIIHKIAPSSDDYIFIKPHYSAFYETP
LNSLLGYLKIENLILTGVAGNICILFTANDAHMRNYTLYVPQDCIASNHDQDNLHALK
IMETTLKANIVPSSQIKFN"
misc_feature complement(23806..24291)
/locus_tag="BAMEG_0023"
/note="Isochorismatase family; Region: Isochorismatase;
pfam00857"
/db_xref="CDD:201475"
misc_feature complement(23812..24288)
/locus_tag="BAMEG_0023"
/note="Cysteine hydrolases; This family contains
amidohydrolases, like CSHase (N-carbamoylsarcosine
amidohydrolase), involved in creatine metabolism and
nicotinamidase, converting nicotinamide to nicotinic acid
and ammonia in the pyridine nucleotide cycle. It...;
Region: cysteine_hydrolases; cd00431"
/db_xref="CDD:29548"
misc_feature complement(order(23926..23928,24025..24027,24271..24273))
/locus_tag="BAMEG_0023"
/note="catalytic triad [active]"
/db_xref="CDD:29548"
misc_feature complement(23938..23943)
/locus_tag="BAMEG_0023"
/note="conserved cis-peptide bond; other site"
/db_xref="CDD:29548"
gene 24408..24908
/locus_tag="BAMEG_0024"
/db_xref="GeneID:7781958"
CDS 24408..24908
/locus_tag="BAMEG_0024"
/note="identified by match to protein family HMM PF00383"
/codon_start=1
/transl_table=11
/product="cytidine/deoxycytidylate deaminase zinc-binding
domain protein"
/protein_id="YP_002812704.1"
/db_xref="GI:227812695"
/db_xref="GeneID:7781958"
/translation="MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHN
LRETEQRSIAHAELLAIDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVY
GAGDPKGGCAGTLMNLLTDERFNHQCEVVAGVLEEECGTLLTNFFRELRKKRKAIKKL
EKSNEN"
misc_feature 24483..24758
/locus_tag="BAMEG_0024"
/note="Nucleoside deaminases include adenosine, guanine
and cytosine deaminases. These enzymes are Zn dependent
and catalyze the deamination of nucleosides. The zinc ion
in the active site plays a central role in the proposed
catalytic mechanism, activating a...; Region:
nucleoside_deaminase; cd01285"
/db_xref="CDD:29828"
misc_feature order(24489..24491,24537..24539,24570..24578,24660..24662,
24669..24671)
/locus_tag="BAMEG_0024"
/note="nucleoside/Zn binding site; other site"
/db_xref="CDD:29828"
misc_feature order(24564..24566,24579..24581,24591..24593,24663..24668,
24675..24680,24687..24692)
/locus_tag="BAMEG_0024"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29828"
misc_feature order(24570..24578,24657..24662,24669..24671)
/locus_tag="BAMEG_0024"
/note="catalytic motif [active]"
/db_xref="CDD:29828"
gene 25101..25203
/gene="srpB"
/locus_tag="BAMEG_0025"
/db_xref="GeneID:7782585"
ncRNA 25101..25203
/gene="srpB"
/locus_tag="BAMEG_0025"
/ncRNA_class="SRP_RNA"
/product="signal recognition particle RNA"
/db_xref="GeneID:7782585"
gene 25385..27073
/gene="dnaX"
/locus_tag="BAMEG_0026"
/db_xref="GeneID:7785630"
CDS 25385..27073
/gene="dnaX"
/locus_tag="BAMEG_0026"
/EC_number="2.7.7.7"
/note="catalyzes the DNA-template-directed extension of
the 3'-end of a DNA strand the tau chain serves as a
scaffold to help in the dimerizaton of the alpha,epsilon
and theta core complex; the gamma chain seems to interact
with the delta and delta' subunits to transfer the beta
subunit on the DNA"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunits gamma and tau"
/protein_id="YP_002812705.1"
/db_xref="GI:227812696"
/db_xref="GeneID:7785630"
/translation="MSYQALYRTWRPQKFEDVVGQKHVTKTLQNALLQEKVSHAYLFS
GPRGTGKTTIAKVFAKAINCEHAPVAEPCNECPSCLGITQGSISDVLEIDAASNNGVD
EIRDIRDKVKYAPSAVEYKVYIIDEVHMLSMGAFNALLKTLEEPPGHVIFILATTEPH
KIPPTIISRCQRFEFRKISVNDIVERLSTVVTNEGTQVEDEALQIVARAAEGGMRDAL
SLIDQAISYSDERVTTEDVLAVTGSVSQQYLGNLVECIRENDVSRALRIIDEMMGKGK
DPVRFMEDFIYYYRDMLLYQTSPQLEHMLERVMVDEQFRMLSEEMQPEVIYEIIHTLS
KGQQEMKWTNHPRIFLEVVMVQLCQQFMMQANGADRLQAIMNRMQQLEKELEQVKKNG
VPVGVQQEVKETRAAPKPVRTGSMKIPVGRVNEVLKQAKRQDLEQLKAVWGELLGRLK
AYNKVAFAVLLENSEPVAASDDTYVLAFQYEIHCKMASENREAMDTVEQALFELLSKK
LNMIAIPKSEWGKIREDFLKREGGSSEESPEKKEDPLIEEAIKLVGQELIEIKE"
misc_feature 25385..27070
/gene="dnaX"
/locus_tag="BAMEG_0026"
/note="DNA polymerase III subunits gamma and tau;
Validated; Region: PRK05563"
/db_xref="CDD:180131"
misc_feature 25439..25915
/gene="dnaX"
/locus_tag="BAMEG_0026"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 25517..25540
/gene="dnaX"
/locus_tag="BAMEG_0026"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(25520..25543,25760..25762,25853..25855)
/gene="dnaX"
/locus_tag="BAMEG_0026"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 25748..25765
/gene="dnaX"
/locus_tag="BAMEG_0026"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 25889..25891
/gene="dnaX"
/locus_tag="BAMEG_0026"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 26078..26458
/gene="dnaX"
/locus_tag="BAMEG_0026"
/note="DNA polymerase III subunits gamma and tau domain
III; Region: DNA_pol3_gamma3; pfam12169"
/db_xref="CDD:152604"
gene 27096..27425
/locus_tag="BAMEG_0027"
/db_xref="GeneID:7787191"
CDS 27096..27425
/locus_tag="BAMEG_0027"
/note="identified by match to protein family HMM PF02575;
match to protein family HMM TIGR00103"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812706.1"
/db_xref="GI:227812697"
/db_xref="GeneID:7787191"
/translation="MMRGGMGNMNNMMKQMQKMQKEMAKAQEELGEKTVEGTAGGGMI
TVIANGHKQILEVKVKEEVVDPEDIEMLQDLVLAATNDALKKADELSNSTMGKFTKGL
NLPGGMF"
misc_feature 27165..27422
/locus_tag="BAMEG_0027"
/note="hypothetical protein; Validated; Region: PRK00153"
/db_xref="CDD:178904"
gene 27440..28036
/gene="recR"
/locus_tag="BAMEG_0028"
/db_xref="GeneID:7783526"
CDS 27440..28036
/gene="recR"
/locus_tag="BAMEG_0028"
/note="involved in a recombinational process of DNA
repair, independent of the recBC complex"
/codon_start=1
/transl_table=11
/product="recombination protein RecR"
/protein_id="YP_002812707.1"
/db_xref="GI:227812698"
/db_xref="GeneID:7783526"
/translation="MHYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFA
KALVNAKRDLAYCSVCGHITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQG
VYHVLRGAISPMGGIGPEDINIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLL
KPTGIKVTRIAHGLPVGGDLEYADEVTLSKALEGRREV"
misc_feature 27446..28033
/gene="recR"
/locus_tag="BAMEG_0028"
/note="recombination protein RecR; Reviewed; Region: recR;
PRK00076"
/db_xref="CDD:178844"
misc_feature 27551..27673
/gene="recR"
/locus_tag="BAMEG_0028"
/note="RecR protein; Region: RecR; pfam02132"
/db_xref="CDD:202123"
misc_feature 27677..28012
/gene="recR"
/locus_tag="BAMEG_0028"
/note="TOPRIM_recR: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in Escherichia coli RecR. RecR participates in the RecFOR
pathway of homologous recombinational repair in
prokaryotes. This pathway provides a...; Region:
TOPRIM_recR; cd01025"
/db_xref="CDD:173775"
misc_feature order(27695..27700,27707..27709,27869..27871,27875..27877,
27881..27883)
/gene="recR"
/locus_tag="BAMEG_0028"
/note="putative active site [active]"
/db_xref="CDD:173775"
misc_feature order(27695..27697,27869..27871)
/gene="recR"
/locus_tag="BAMEG_0028"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173775"
misc_feature order(27713..27721,27725..27730,27851..27853,27857..27859,
27863..27865,27872..27874,27908..27910,27938..27973,
27977..27979,27992..27994,27998..28000,28004..28012)
/gene="recR"
/locus_tag="BAMEG_0028"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:173775"
gene 28051..28272
/locus_tag="BAMEG_0029"
/db_xref="GeneID:7784467"
CDS 28051..28272
/locus_tag="BAMEG_0029"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812708.1"
/db_xref="GI:227812699"
/db_xref="GeneID:7784467"
/translation="MFFQKKGKLRKEYDDNLIVLLEKVKNEWLRQKRMVEQSVEPSQD
VLCSLKIAEAKYFFLLKEAKRRPVKMEQW"
misc_feature 28051..28263
/locus_tag="BAMEG_0029"
/note="Protein of unknown function (DUF2508); Region:
DUF2508; pfam10704"
/db_xref="CDD:204542"
gene 28487..28756
/gene="bofA"
/locus_tag="BAMEG_0030"
/db_xref="GeneID:7783850"
CDS 28487..28756
/gene="bofA"
/locus_tag="BAMEG_0030"
/note="identified by match to protein family HMM PF07441;
match to protein family HMM TIGR02862"
/codon_start=1
/transl_table=11
/product="sigma-k factor processing regulatory protein
BofA"
/protein_id="YP_002812709.1"
/db_xref="GI:227812700"
/db_xref="GeneID:7783850"
/translation="MNSTIIIVGILALVFIFLVFGVSSKPLRFIGKALFHVTLGVALL
FIVNVVGTYFDFHIPINLGTATITSLLGLPGVAALVVIKLYIMPR"
misc_feature 28496..>28693
/gene="bofA"
/locus_tag="BAMEG_0030"
/note="pro-sigmaK processing inhibitor BofA; Region:
spore_BofA; TIGR02862"
/db_xref="CDD:163046"
gene 29000..30508
/gene="rrs_2"
/locus_tag="BAMEG_0031"
/db_xref="GeneID:7784778"
rRNA 29000..30508
/gene="rrs_2"
/locus_tag="BAMEG_0031"
/product="16S ribosomal RNA"
/db_xref="GeneID:7784778"
gene 30658..30736
/locus_tag="BAMEG_0032"
/db_xref="GeneID:7785640"
tRNA 30658..30736
/locus_tag="BAMEG_0032"
/product="tRNA-Ile"
/db_xref="GeneID:7785640"
gene 30743..30820
/locus_tag="BAMEG_0033"
/db_xref="GeneID:7785736"
tRNA 30743..30820
/locus_tag="BAMEG_0033"
/product="tRNA-Ala"
/db_xref="GeneID:7785736"
gene 30914..33821
/gene="rrl_2"
/locus_tag="BAMEG_0035"
/db_xref="GeneID:7785685"
rRNA 30914..33821
/gene="rrl_2"
/locus_tag="BAMEG_0035"
/product="23S ribosomal RNA"
/db_xref="GeneID:7785685"
gene 33870..33985
/gene="rrf_2"
/locus_tag="BAMEG_0036"
/db_xref="GeneID:7785654"
rRNA 33870..33985
/gene="rrf_2"
/locus_tag="BAMEG_0036"
/product="5S ribosomal RNA"
/db_xref="GeneID:7785654"
gene 34176..34355
/locus_tag="BAMEG_0037"
/db_xref="GeneID:7785633"
CDS 34176..34355
/locus_tag="BAMEG_0037"
/codon_start=1
/transl_table=11
/product="putative csfB protein"
/protein_id="YP_002812710.1"
/db_xref="GI:227812701"
/db_xref="GeneID:7785633"
/translation="MKSQNEVCIVCETERKEGIYVYNNLICYECEKDMVNTETDDPKY
IYYLKQLRKLEVSYF"
misc_feature 34194..34331
/locus_tag="BAMEG_0037"
/note="Inhibitor of sigma-G Gin; Region: Gin; pfam10764"
/db_xref="CDD:204552"
gene 34427..35848
/locus_tag="BAMEG_0038"
/db_xref="GeneID:7785910"
CDS 34427..35848
/locus_tag="BAMEG_0038"
/note="identified by match to protein family HMM PF01276;
match to protein family HMM PF03711"
/codon_start=1
/transl_table=11
/product="Orn/Lys/Arg decarboxylase family protein"
/protein_id="YP_002812711.1"
/db_xref="GI:227812702"
/db_xref="GeneID:7785910"
/translation="MNQNRIPLYEALIEFKERRRLSFHVPGHKNGLNFPQEVVEEFKD
ILSIDVTELSGLDDLHSPFECIDEAQQLLADVYGVNKSYFLINGSTVGNLAMILSCCG
EHDIVLVQRNCHKSIINGLKLAGANPIFLDPWIDEAYNVPVGIHDEIIKEAIEKYPNA
KALILTHPNYYGMGMDLEASIAYAHTHKIPVLVDEAHGAHFCLGGAFPQSALAYGADM
VVHSAHKTLPAMTMGSYLHINSRLVKEEKVSTYLSMLQSSSPSYPIMASLDIARFTIA
RIKEKGHDEIVEFLQEFKEELSTIPQIAILQYPLQDGLKITVQTRCRLSGYELQSVFE
KVGIYTEMADPYNVLFILPLQVNKKYMKAIEMIRVALQYYEVKDKTESIRYTYKGEIS
PLPYTYKQLEEYETKVVPIEEAVGMVAAEMVIPYPPGIPLIMYGERITSGHKEQIMYL
EKAGARFQGSRKYMKVYDIESRF"
misc_feature 34430..35803
/locus_tag="BAMEG_0038"
/note="Arginine/lysine/ornithine decarboxylases [Amino
acid transport and metabolism]; Region: LdcC; COG1982"
/db_xref="CDD:32165"
misc_feature 34445..35323
/locus_tag="BAMEG_0038"
/note="Ornithine decarboxylase family. This family belongs
to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). The major groups in
this CD corresponds to ornithine decarboxylase (ODC),
arginine decarboxylase (ADC) and lysine...; Region:
Orn_deC_like; cd00615"
/db_xref="CDD:99739"
misc_feature order(34571..34573,34583..34585,34607..34609,34682..34690,
34694..34699,34706..34708,34718..34726,34730..34735,
34766..34771,35096..35101,35108..35122,35174..35179,
35183..35191,35195..35197,35216..35218,35225..35227,
35234..35236,35270..35275)
/locus_tag="BAMEG_0038"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99739"
misc_feature order(34688..34696,34766..34768,34772..34774,34922..34924,
35006..35008,35012..35017,35090..35092,35096..35101)
/locus_tag="BAMEG_0038"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99739"
misc_feature 35099..35101
/locus_tag="BAMEG_0038"
/note="catalytic residue [active]"
/db_xref="CDD:99739"
misc_feature <35564..35803
/locus_tag="BAMEG_0038"
/note="Orn/Lys/Arg decarboxylase, C-terminal domain;
Region: OKR_DC_1_C; pfam03711"
/db_xref="CDD:112521"
gene 35850..36476
/gene="tmk"
/locus_tag="BAMEG_0039"
/db_xref="GeneID:7785051"
CDS 35850..36476
/gene="tmk"
/locus_tag="BAMEG_0039"
/EC_number="2.7.4.9"
/note="catalyzes the reversible phosphoryl transfer from
adenosine triphosphate (ATP) to thymidine monophosphate
(dTMP) to form thymidine diphosphate (dTDP)"
/codon_start=1
/transl_table=11
/product="thymidylate kinase"
/protein_id="YP_002812712.1"
/db_xref="GI:227812703"
/db_xref="GeneID:7785051"
/translation="MKGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIA
ISEDIRTILHKQEYTMMEARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSL
AYQGYARGLGMDKVFEINRFATEDCMPSLTIYLDIEPEVGLARIAKDAGREVNRLDME
DISFHKRVREGYLQVVERFSDRIVLVNADQPMEKLIEEVIQVIEDKLL"
misc_feature 35850..36470
/gene="tmk"
/locus_tag="BAMEG_0039"
/note="thymidylate kinase; Validated; Region: tmk;
PRK00698"
/db_xref="CDD:179089"
misc_feature 35859..36464
/gene="tmk"
/locus_tag="BAMEG_0039"
/note="Thymidine monophosphate kinase (TMPK), also known
as thymidylate kinase, catalyzes the phosphorylation of
thymidine monophosphate (TMP) to thymidine diphosphate
(TDP) utilizing ATP as its preferred phophoryl donor. TMPK
represents the rate-limiting step...; Region: TMPK;
cd01672"
/db_xref="CDD:30190"
misc_feature order(35898..35900,36057..36059,36069..36071,36132..36137,
36159..36161,36294..36296)
/gene="tmk"
/locus_tag="BAMEG_0039"
/note="TMP-binding site; other site"
/db_xref="CDD:30190"
misc_feature order(35901..35903,36282..36284,36411..36413)
/gene="tmk"
/locus_tag="BAMEG_0039"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:30190"
gene 36512..37495
/gene="holB"
/locus_tag="BAMEG_0040"
/db_xref="GeneID:7783368"
CDS 36512..37495
/gene="holB"
/locus_tag="BAMEG_0040"
/EC_number="2.7.7.7"
/note="catalyzes the DNA-template-directed extension of
the 3'-end of a DNA strand; the delta' subunit seems to
interact with the gamma subunit to transfer the beta
subunit on the DNA"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit delta'"
/protein_id="YP_002812713.1"
/db_xref="GI:227812704"
/db_xref="GeneID:7783368"
/translation="MTKTWEQLSAIQPIGVKMLMNSIAKERISHAYLLEGEKGTGKFA
TAIQMAKSFLCSQRNRVEPCHVCTNCKRIDSGNHPNLHIVKPDGLSIKKQQIHDLQEE
FSKTGLEANKKVYIIEHADRMTANAANALLKFLEEPSSDTTAILLTEQSHQILNTILS
RCQVVTFRPLPTESLIRRLQDEGITVSLSTLAAQLTNSFDEALTLCNDEWFAQARALV
IKLCEALEKDKASIFFVQEKWGKHFGEKEQLQQGLDMLLLIYKDLLYVQLGEEDRLVF
REQKEMFESFSYAQKRIVSALFNILEAKNRINANVNAQLVFEQLVLRLQEG"
misc_feature 36515..37492
/gene="holB"
/locus_tag="BAMEG_0040"
/note="DNA polymerase III subunit delta'; Validated;
Region: PRK08058"
/db_xref="CDD:181214"
misc_feature 36797..>37015
/gene="holB"
/locus_tag="BAMEG_0040"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
gene 37501..38328
/locus_tag="BAMEG_0041"
/db_xref="GeneID:7783645"
CDS 37501..38328
/locus_tag="BAMEG_0041"
/note="identified by match to protein family HMM PF04468"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812714.1"
/db_xref="GI:227812705"
/db_xref="GeneID:7783645"
/translation="MYDVVGVRFKKAGKVYYFDPNQFDISENEFVIVETVRGIEYGKV
VITKKQVDENDVVLPLKKVIRIANENDRTIVEENKHAAKEAYQVCQQKVVEHNLDMKL
VDVEYTFDRNKIIFYFTADGRIDFRELVKDLAAIFRTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPAKISGLCGRLMCCLKYENDEYEAAKEQ
LPDLDQRIQTPHGTGRVIGLNILERLIQVELVDKERIVEYTLDELVNKGVVSSQTTD"
misc_feature 37501..38292
/locus_tag="BAMEG_0041"
/note="Uncharacterized homolog of PSP1 [Function unknown];
Region: COG1774"
/db_xref="CDD:31960"
gene 38343..38693
/locus_tag="BAMEG_0042"
/db_xref="GeneID:7785420"
CDS 38343..38693
/locus_tag="BAMEG_0042"
/note="in Bacillus subtilis this protein is involved in
the negative regulation of DNA replication initiation;
interacts with DnaN and DnaA"
/codon_start=1
/transl_table=11
/product="DNA replication intiation control protein YabA"
/protein_id="YP_002812715.1"
/db_xref="GI:227812706"
/db_xref="GeneID:7785420"
/translation="MEKKDIFASVSSMEEQIGHLYKQLGELKQHLAELLEENQHIKME
NENLRHRFEEVQIKEKQKTQKRKEVKPKTDIGEGYDNLARLYQEGFHICNLHYGSVRK
EGDCLFCLSFLNKK"
misc_feature 38343..38690
/locus_tag="BAMEG_0042"
/note="DNA replication intiation control protein YabA;
Reviewed; Region: PRK13169"
/db_xref="CDD:183876"
gene 38814..39554
/locus_tag="BAMEG_0043"
/db_xref="GeneID:7784048"
CDS 38814..39554
/locus_tag="BAMEG_0043"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812716.1"
/db_xref="GI:227812707"
/db_xref="GeneID:7784048"
/translation="MNLYEDERLDYLLAQDMKIIQSPSVFNFSLDAVLLADFAWVPIQ
KGNLLDLCTGNAVVPLLLSTRTKGNITGVEIQERLYDMGIRSVQYNKLEERIHLIHGD
LKDMPEKLGRHQYDVVTCNPPYFQTPVTSEKNMNEHLAIARHEIMCTLEDVVSASSQL
VKQGGKVAFVHRPGRLLDIVTLMRKYKIEPKRVRFVYPKAGKEANTLLIEGIKDGNAD
LKILPPLFVYEENNEYTKEIRSILYGEE"
misc_feature 38820..39548
/locus_tag="BAMEG_0043"
/note="Predicted O-methyltransferase [General function
prediction only]; Region: COG4123"
/db_xref="CDD:33880"
misc_feature 38952..>39188
/locus_tag="BAMEG_0043"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(38964..38984,39033..39038,39114..39122,39174..39176)
/locus_tag="BAMEG_0043"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 39541..39831
/locus_tag="BAMEG_0044"
/db_xref="GeneID:7782325"
CDS 39541..39831
/locus_tag="BAMEG_0044"
/note="identified by match to protein family HMM PF01541"
/codon_start=1
/transl_table=11
/product="GIY-YIG nuclease superfamily protein"
/protein_id="YP_002812717.1"
/db_xref="GI:227812708"
/db_xref="GeneID:7782325"
/translation="MEKNKHCFYVVECSDGSYYAGYTNHIEKRIGTHNSGRGAKYTRA
RLPVVLKYVEFHEDKRTAMQAEYYFKQLNRKQKEEYMQKGERYVATKKLSTK"
misc_feature 39556..39756
/locus_tag="BAMEG_0044"
/note="The GIY-YIG domain of uncharacterized protein
family UPF0213 related to structure-specific endonuclease
SLX1; Region: GIY-YIG_UPF0213; cd10456"
/db_xref="CDD:198403"
misc_feature order(39559..39567,39595..39603)
/locus_tag="BAMEG_0044"
/note="GIY-YIG motif/motif A; other site"
/db_xref="CDD:198403"
misc_feature order(39565..39567,39595..39597,39601..39603,39625..39627,
39637..39639,39736..39738)
/locus_tag="BAMEG_0044"
/note="putative active site [active]"
/db_xref="CDD:198403"
misc_feature 39736..39738
/locus_tag="BAMEG_0044"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:198403"
gene 39800..40675
/locus_tag="BAMEG_0045"
/db_xref="GeneID:7786617"
CDS 39800..40675
/locus_tag="BAMEG_0045"
/EC_number="2.1.1.-"
/note="identified by match to protein family HMM PF00590;
match to protein family HMM TIGR00096"
/codon_start=1
/transl_table=11
/product="tetrapyrrole methylase"
/protein_id="YP_002812718.1"
/db_xref="GI:227812709"
/db_xref="GeneID:7786617"
/translation="MWQQKSFQQNEKGVLYLVPTPIGNLEDMTFRAIRILKEADLIAA
EDTRQTKKLCNYFEIETPVMSYHEHNKEVSGKKILEKLDEGKTVALVSDAGMPCISDP
GYDIVVEAVAEQYHVIPLPGANAALTALIASGLQTKQFYFYGFLQRNKKERKMELEKL
RYVQTTMMFYEAPHRLDDTLISMQEVLGNREIVLCRELTKKFEEFIRGTVEEAIEWTK
QNEVRGEFCILVAGSTEEPAPEEQWWESISVYNHIEHYINEKGMNSKEAIKTVAKDRD
LSKRDVYQIYHVDKK"
misc_feature 39833..40660
/locus_tag="BAMEG_0045"
/note="Predicted methyltransferases [General function
prediction only]; Region: COG0313"
/db_xref="CDD:30661"
misc_feature 39842..40495
/locus_tag="BAMEG_0045"
/note="Ribosomal RNA small subunit methyltransferase I,
also known as rRNA (cytidine-2'-O-)-methyltransferase
RsmI; Region: RsmI; cd11648"
/db_xref="CDD:212507"
misc_feature order(39863..39865,40079..40087,40094..40099,40169..40174,
40307..40309,40382..40384,40388..40393,40472..40480)
/locus_tag="BAMEG_0045"
/note="putative SAM binding site [chemical binding]; other
site"
/db_xref="CDD:212507"
misc_feature order(39881..39892,39896..39898,40085..40102,40109..40114,
40118..40123,40154..40156,40160..40171,40175..40180,
40187..40192,40217..40231)
/locus_tag="BAMEG_0045"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:212507"
gene complement(40696..40980)
/gene="abrB"
/locus_tag="BAMEG_0046"
/db_xref="GeneID:7784816"
CDS complement(40696..40980)
/gene="abrB"
/locus_tag="BAMEG_0046"
/note="identified by match to protein family HMM PF04014;
match to protein family HMM TIGR01439"
/codon_start=1
/transl_table=11
/product="transition state transcriptional regulator AbrB"
/protein_id="YP_002812719.1"
/db_xref="GI:227812710"
/db_xref="GeneID:7784816"
/translation="MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKII
LKKYKPNMTCQVTGEVSDGNLFLAEGKIILSKEGAEQILNELQDYIETAK"
misc_feature complement(40711..40980)
/gene="abrB"
/locus_tag="BAMEG_0046"
/note="Regulators of stationary/sporulation gene
expression [Transcription]; Region: AbrB; COG2002"
/db_xref="CDD:32185"
misc_feature complement(40831..40959)
/gene="abrB"
/locus_tag="BAMEG_0046"
/note="SpoVT / AbrB like domain; Region: SpoVT_AbrB;
smart00966"
/db_xref="CDD:198034"
gene 41471..43453
/gene="metS"
/locus_tag="BAMEG_0047"
/db_xref="GeneID:7783017"
CDS 41471..43453
/gene="metS"
/locus_tag="BAMEG_0047"
/EC_number="6.1.1.10"
/note="methionine--tRNA ligase; MetRS; adds methionine to
tRNA(Met) with cleavage of ATP to AMP and diphosphate;
some MetRS enzymes form dimers depending on a C-terminal
domain that is also found in other proteins such as
Trbp111 in Aquifex aeolicus and the cold-shock protein
CsaA from Bacillus subtilis while others do not; four
subfamilies exist based on sequence motifs and zinc
content"
/codon_start=1
/transl_table=11
/product="methionyl-tRNA synthetase"
/protein_id="YP_002812720.1"
/db_xref="GI:227812711"
/db_xref="GeneID:7783017"
/translation="MTEENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKCMQGY
NVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDISCDDFIRTTEDR
HKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDS
GHDVELVREESYFFRMGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVS
RTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIV
RFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVILIDRYGLDALR
YYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKANV
TEFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKYIDETQPWVLAKDED
DREKLASVMAHLAEVLRQTGIMLMPFLTVAPSKMFAQLGLTDEAHTSWGSLSTIGCIP
AGTKVEKGQPIFPRLEMDVEVAYIKEQMKASAPKVEEKKEEEPKAEEITIDDFFKVEL
RVAEVLSAEPVKKADKLLKIQLDLGTEKRQVVSGIAKFYSPEDLKGKKVICVTNLKPV
KLRGELSQGMILAGEENGVLSLASIDQNIPNGTKIK"
misc_feature 41477..43450
/gene="metS"
/locus_tag="BAMEG_0047"
/note="methionyl-tRNA synthetase; Reviewed; Region:
PRK12267"
/db_xref="CDD:183389"
misc_feature 41492..42517
/gene="metS"
/locus_tag="BAMEG_0047"
/note="catalytic core domain of methioninyl-tRNA
synthetases; Region: MetRS_core; cd00814"
/db_xref="CDD:173907"
misc_feature order(41507..41512,41516..41518,41627..41629,42185..42187,
42194..42199,42206..42208,42293..42295,42305..42307)
/gene="metS"
/locus_tag="BAMEG_0047"
/note="active site"
/db_xref="CDD:173907"
misc_feature 41534..41545
/gene="metS"
/locus_tag="BAMEG_0047"
/note="HIGH motif; other site"
/db_xref="CDD:173907"
misc_feature 42398..42412
/gene="metS"
/locus_tag="BAMEG_0047"
/note="KMSKS motif; other site"
/db_xref="CDD:173907"
misc_feature 42542..42934
/gene="metS"
/locus_tag="BAMEG_0047"
/note="Anticodon-binding domain of methionyl tRNA
synthetases; Region: Anticodon_Ia_Met; cd07957"
/db_xref="CDD:153411"
misc_feature order(42545..42547,42566..42571,42578..42583,42590..42595,
42602..42607,42614..42619,42770..42775,42779..42784,
42797..42799)
/gene="metS"
/locus_tag="BAMEG_0047"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153411"
misc_feature order(42566..42568,42578..42583,42590..42595,42602..42607,
42614..42619,42779..42781,42797..42799)
/gene="metS"
/locus_tag="BAMEG_0047"
/note="anticodon binding site; other site"
/db_xref="CDD:153411"
misc_feature 43136..43450
/gene="metS"
/locus_tag="BAMEG_0047"
/note="tRNA-binding-domain-containing Escherichia coli
methionyl-tRNA synthetase (EcMetRS)-like proteins. This
family includes EcMetRS and Aquifex aeolicus Trbp111
(AaTrbp111). This domain has general tRNA binding
properties. MetRS aminoacylates methionine...; Region:
tRNA_bind_EcMetRS_like; cd02800"
/db_xref="CDD:48402"
misc_feature order(43139..43141,43280..43282,43328..43336,43343..43345,
43379..43390,43406..43408,43412..43414,43418..43420,
43427..43429,43439..43450)
/gene="metS"
/locus_tag="BAMEG_0047"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48402"
misc_feature order(43214..43216,43250..43252,43328..43330,43340..43342,
43361..43363,43370..43372)
/gene="metS"
/locus_tag="BAMEG_0047"
/note="putative tRNA-binding site [nucleotide binding];
other site"
/db_xref="CDD:48402"
gene 43619..44386
/locus_tag="BAMEG_0048"
/db_xref="GeneID:7786825"
CDS 43619..44386
/locus_tag="BAMEG_0048"
/note="identified by match to protein family HMM PF01026;
match to protein family HMM TIGR00010"
/codon_start=1
/transl_table=11
/product="TatD family deoxyribonuclease"
/protein_id="YP_002812721.1"
/db_xref="GI:227812712"
/db_xref="GeneID:7786825"
/translation="MLFDTHSHLNAEQFEEDLQEVIARMKEAGVTYTVVVGFDEATIK
KAIELAEAYDFIYAAVGWHPVDAIDMTEEHLAWLEELASHPKVVALGEMGLDYHWDKS
PKEIQKEVFRKQITLAKKVKLPIIIHNRDATQDIVDILEEENAAEVGGIMHCFSGSVE
VAERCVDMNFLISLGGPVTFKNAKKPKEVATEIPLEKLLIETDCPYLTPHPFRGKRNE
PSYVKLVAEEIANLKGISYEEVAEITTKNAKALFGVE"
misc_feature 43619..44380
/locus_tag="BAMEG_0048"
/note="Predicted metal-dependent hydrolases with the
TIM-barrel fold [General function prediction only];
Region: COG1099"
/db_xref="CDD:31296"
misc_feature 43622..44377
/locus_tag="BAMEG_0048"
/note="TatD like proteins; E.coli TatD is a cytoplasmic
protein, shown to have magnesium dependent DNase activity;
Region: TatD_DNAse; cd01310"
/db_xref="CDD:30053"
misc_feature order(43634..43636,43640..43642,44000..44002,44075..44077,
44225..44227)
/locus_tag="BAMEG_0048"
/note="active site"
/db_xref="CDD:30053"
gene 44601..45158
/locus_tag="BAMEG_0049"
/db_xref="GeneID:7784257"
CDS 44601..45158
/locus_tag="BAMEG_0049"
/note="identified by match to protein family HMM PF01751;
match to protein family HMM TIGR00334"
/codon_start=1
/transl_table=11
/product="primase-like protein"
/protein_id="YP_002812722.1"
/db_xref="GI:227812713"
/db_xref="GeneID:7784257"
/translation="MKIKEIIVVEGKDDTVAIKRAVDADTIETNGSAIGDHVIEQVKL
ALQKRGVIIFTDPDYPGERIRKIISDKVPGCKHAFLPKEEALAKRKKGVGIEHASNES
IRRALENIHEEMEAYTSEISWSDLVDAGLVGGEMAKSRRERMGKLLKIGYTNAKQLHK
RLQMFQVSKESFAEAYKQVIQEERK"
misc_feature 44604..45131
/locus_tag="BAMEG_0049"
/note="ribonuclease M5; Region: 5S_RNA_mat_M5; TIGR00334"
/db_xref="CDD:161823"
misc_feature 44607..44840
/locus_tag="BAMEG_0049"
/note="TOPRIM_ RNase M5_like: The topoisomerase-primase
(TOPRIM) nucleotidyl transferase/hydrolase domain found in
Ribonuclease M5: (RNase M5) and other small primase-like
proteins from bacteria and archaea. RNase M5 catalyzes
the maturation of 5S rRNA in low...; Region:
TOPRIM_RNase_M5_like; cd01027"
/db_xref="CDD:173777"
misc_feature order(44628..44633,44640..44642,44766..44768,44772..44774,
44778..44780)
/locus_tag="BAMEG_0049"
/note="putative active site [active]"
/db_xref="CDD:173777"
misc_feature order(44628..44630,44766..44768)
/locus_tag="BAMEG_0049"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:173777"
misc_feature 44874..45131
/locus_tag="BAMEG_0049"
/note="Domain of unknown function (DUF4093); Region:
DUF4093; pfam13331"
/db_xref="CDD:205511"
gene 45155..46033
/gene="ksgA"
/locus_tag="BAMEG_0050"
/db_xref="GeneID:7783491"
CDS 45155..46033
/gene="ksgA"
/locus_tag="BAMEG_0050"
/EC_number="2.1.1.-"
/note="catalyzes the transfer of a total of four methyl
groups from S-adenosyl-l-methionine (S-AdoMet) to two
adjacent adenosine bases A1518 and A1519 in 16S rRNA;
mutations in ksgA causes resistance to the translation
initiation inhibitor kasugamycin"
/codon_start=1
/transl_table=11
/product="dimethyladenosine transferase"
/protein_id="YP_002812723.1"
/db_xref="GI:227812714"
/db_xref="GeneID:7783491"
/translation="MKDIATPNRTKDIVEKYGFSFKKSLGQNFLIDTNVLNRIVDHAE
IGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILDETLAPYGNVTVINKDV
LKADVHEVFSEQFEEGQDVMVVANLPYYITTPILFKLLEEKLPVRGFVVMMQKEVGDR
LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVT
DETFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDKELLDRILTEVGIDPKRRGETLSI
EEFATLSNALVLHKLS"
misc_feature 45170..46012
/gene="ksgA"
/locus_tag="BAMEG_0050"
/note="16S ribosomal RNA methyltransferase KsgA/Dim1
family protein; Reviewed; Region: ksgA; PRK00274"
/db_xref="CDD:178953"
misc_feature 45308..45580
/gene="ksgA"
/locus_tag="BAMEG_0050"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(45314..45334,45380..45385,45467..45475,45530..45532)
/gene="ksgA"
/locus_tag="BAMEG_0050"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 46144..47007
/locus_tag="BAMEG_0051"
/db_xref="GeneID:7782111"
CDS 46144..47007
/locus_tag="BAMEG_0051"
/note="identified by match to protein family HMM PF05582;
match to protein family HMM TIGR02855"
/codon_start=1
/transl_table=11
/product="yabG protein"
/protein_id="YP_002812724.1"
/db_xref="GI:227812715"
/db_xref="GeneID:7782111"
/translation="MALHVGELVERYSHNRDILFRIIEIKGEIAILFGEEIRLVADAP
LEDLISIDQREHKKRAKREKETMERTYRLFQQDYVLMKQRHEHTSTGGYTSEVNYFQM
PGRVLHIDGDPLYLRKCLDLYNKIGVPVQGIHCKETEMHEKVVDLIDHFRPDILVITG
HDAYTKSKGVKGDLAAYRHSRHFVQAVREVRKKYPSLDQLVIFAGACQSHFEALIRAG
ANFASSPSRINIHALDPVYVVGKISFTSFMERVNVWDVVRNTITGEKGLGGIETRGIL
RTGLPFQHYEE"
misc_feature 46153..46989
/locus_tag="BAMEG_0051"
/note="sporulation peptidase YabG; Region: spore_yabG;
TIGR02855"
/db_xref="CDD:163041"
gene 47246..47506
/locus_tag="BAMEG_0052"
/db_xref="GeneID:7787345"
CDS 47246..47506
/locus_tag="BAMEG_0052"
/note="identified by match to protein family HMM PF06257"
/codon_start=1
/transl_table=11
/product="veg protein"
/protein_id="YP_002812725.1"
/db_xref="GI:227812716"
/db_xref="GeneID:7787345"
/translation="MSKRLDEIKSELDHHLGQRLMLKANSGRRKTVEQSGVLAETYRS
VFVVQLDQQEDALQRVSYSYADVLTETVELTFYGEPHNEVIL"
misc_feature 47246..47473
/locus_tag="BAMEG_0052"
/note="Protein of unknown function (DUF1021); Region:
DUF1021; pfam06257"
/db_xref="CDD:148082"
gene 47598..47777
/gene="sspF"
/locus_tag="BAMEG_0053"
/db_xref="GeneID:7786472"
CDS 47598..47777
/gene="sspF"
/locus_tag="BAMEG_0053"
/codon_start=1
/transl_table=11
/product="small, acid-soluble spore protein"
/protein_id="YP_002812726.1"
/db_xref="GI:227812717"
/db_xref="GeneID:7786472"
/translation="MSRRRGVMSNQFKEELAKELGFYDVVQKEGWGGIRAKDAGNMVK
RAIEIAEQQLMKQNQ"
misc_feature 47625..47759
/gene="sspF"
/locus_tag="BAMEG_0053"
/note="Small, acid-soluble spore proteins, alpha/beta
type; Region: SASP; pfam00269"
/db_xref="CDD:144014"
gene 47974..48843
/gene="ipk"
/locus_tag="BAMEG_0054"
/db_xref="GeneID:7785298"
CDS 47974..48843
/gene="ipk"
/locus_tag="BAMEG_0054"
/EC_number="2.7.1.148"
/note="An essential enzyme in the nonmevalonate pathway of
isopentenyl diphosphate and dimethylallyl diphosphate
biosynthesis"
/codon_start=1
/transl_table=11
/product="4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase"
/protein_id="YP_002812727.1"
/db_xref="GI:227812718"
/db_xref="GeneID:7785298"
/translation="MKLLVKAPAKINLSLDVLGKRQDGYHEVKMIMTTIDLADRLELM
ELAEDRIEILSHNRYVPDDQRNLAYQAAKLLKEKFNVKKGVSITIEKTIPVAAGLAGG
SSDAAATLRGLNKLWNLGLTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEHIKT
PPSCWVILAKPHIGVSTADVYGNLKLNRVTHPNVDKMVDVINAGDYKGICDTVGNVLE
DVTFAMHPEVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKGFCEQV
YAVRLLGERETLE"
misc_feature 47974..48831
/gene="ipk"
/locus_tag="BAMEG_0054"
/note="4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;
Provisional; Region: ipk; PRK00128"
/db_xref="CDD:178884"
misc_feature 48229..48405
/gene="ipk"
/locus_tag="BAMEG_0054"
/note="GHMP kinases N terminal domain; Region:
GHMP_kinases_N; pfam00288"
/db_xref="CDD:201132"
misc_feature 48562..48798
/gene="ipk"
/locus_tag="BAMEG_0054"
/note="GHMP kinases C terminal; Region: GHMP_kinases_C;
pfam08544"
/db_xref="CDD:203975"
gene 48898..49746
/gene="purR"
/locus_tag="BAMEG_0055"
/db_xref="GeneID:7782570"
CDS 48898..49746
/gene="purR"
/locus_tag="BAMEG_0055"
/note="identified by match to protein family HMM PF00156;
match to protein family HMM PF09182; match to protein
family HMM TIGR01743"
/codon_start=1
/transl_table=11
/product="pur operon repressor"
/protein_id="YP_002812728.1"
/db_xref="GI:227812719"
/db_xref="GeneID:7782570"
/translation="MKIRRSTRLVDMTYYLLQNPRQLVSLTFFAERYQSAKSSISEDL
VIIKQTFEQQGVGTLQTIPGAAGGVKYIPYISEEEADLIIGELCSLFENPDRILPGGY
LYMTDLLSNPRHINGAGRLFASVFARQPIDAVMTVATKGIPLAYAVANYLDVPVVIAR
KDNKVTEGPTVSINYVSGSSKRIQTMTLAKRSLPEGSNVLIIDDFMKAGGTIQGMMSM
LEEFKANVVGIGVLVESTDIEERLINNFVSLIRLSEVDVKEKAIQVEKGNYSLAPFDE
GIVEAE"
misc_feature 48898..49704
/gene="purR"
/locus_tag="BAMEG_0055"
/note="pur operon repressor; Provisional; Region:
PRK09213"
/db_xref="CDD:181702"
misc_feature 48907..49116
/gene="purR"
/locus_tag="BAMEG_0055"
/note="Bacterial purine repressor, N-terminal; Region:
PuR_N; pfam09182"
/db_xref="CDD:150015"
misc_feature 49249..49599
/gene="purR"
/locus_tag="BAMEG_0055"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(49309..49311,49315..49317,49504..49512,49516..49530)
/gene="purR"
/locus_tag="BAMEG_0055"
/note="active site"
/db_xref="CDD:206754"
gene 49733..49852
/locus_tag="BAMEG_0056"
/db_xref="GeneID:7782005"
CDS 49733..49852
/locus_tag="BAMEG_0056"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812729.1"
/db_xref="GI:227812720"
/db_xref="GeneID:7782005"
/translation="MRLSKKIKQIALSFFILFINYKIDGQTAFRALFLKSKNK"
gene 49869..50243
/locus_tag="BAMEG_0057"
/db_xref="GeneID:7786901"
CDS 49869..50243
/locus_tag="BAMEG_0057"
/note="identified by match to protein family HMM PF01042;
match to protein family HMM TIGR00004"
/codon_start=1
/transl_table=11
/product="putative endoribonuclease L-PSP"
/protein_id="YP_002812730.1"
/db_xref="GI:227812721"
/db_xref="GeneID:7786901"
/translation="MKVVQTNNAPQAIGPYSQGIIVNNMFYSSGQIPLTASGELVAGD
VTVQTEQVFQNLQAVLEEAGASFDTVVKTTVFLKDMDDFNAVNEVYGSYFSAHKPARS
CVQVAKLPKDVSVEIEVIALVK"
misc_feature 49914..50231
/locus_tag="BAMEG_0057"
/note="YjgF, YER057c, and UK114 belong to a large family
of proteins present in bacteria, archaea, and eukaryotes
with no definitive function. The conserved domain is
similar in structure to chorismate mutase but there is no
sequence similarity and no...; Region:
YjgF_YER057c_UK114_family; cd00448"
/db_xref="CDD:100004"
misc_feature order(49914..49919,49926..49928,49932..49934,49941..49943,
49947..49949,49953..49958,50073..50075,50079..50084,
50088..50090,50094..50096,50127..50129,50136..50138,
50163..50186,50214..50216,50220..50222,50226..50228)
/locus_tag="BAMEG_0057"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100004"
misc_feature order(49914..49916,50115..50117,50127..50129,50169..50171,
50214..50216)
/locus_tag="BAMEG_0057"
/note="putative active site [active]"
/db_xref="CDD:100004"
gene 50396..50689
/gene="spoVG"
/locus_tag="BAMEG_0058"
/db_xref="GeneID:7785615"
CDS 50396..50689
/gene="spoVG"
/locus_tag="BAMEG_0058"
/note="stage V sporulation protein G; essential for spore
formation and a negative regulator of asymmetric septation
in Bacillus; involved in methicillin-resistance, biofilm
formation and capsular polysaccharide synthesis in
Staphylococcus"
/codon_start=1
/transl_table=11
/product="regulatory protein SpoVG"
/protein_id="YP_002812731.1"
/db_xref="GI:227812722"
/db_xref="GeneID:7785615"
/translation="MEVTDVRLRRVNTEGRMRAIASITLDHEFVVHDIRVIDGNNGLF
VAMPSKRTPDGEFRDIAHPINSGTRSKIQDAVLTEYHRLGELEEVEFEEAGAS"
misc_feature 50396..50647
/gene="spoVG"
/locus_tag="BAMEG_0058"
/note="regulatory protein SpoVG; Reviewed; Region:
PRK13259"
/db_xref="CDD:183925"
gene 51012..52391
/gene="glmU"
/locus_tag="BAMEG_0059"
/db_xref="GeneID:7782316"
CDS 51012..52391
/gene="glmU"
/locus_tag="BAMEG_0059"
/EC_number="2.3.1.157"
/EC_number="2.7.7.23"
/note="forms a homotrimer; catalyzes the acetylation of
glucosamine-1-phosphate and uridylation of
N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc;
function in cell wall synthesis"
/codon_start=1
/transl_table=11
/product="bifunctional N-acetylglucosamine-1-phosphate
uridyltransferase/glucosamine-1-phosphate
acetyltransferase"
/protein_id="YP_002812732.1"
/db_xref="GI:227812723"
/db_xref="GeneID:7782316"
/translation="MSNRFAVILAAGKGTRMKSKLYKVLHPVCGKPMVQHVVDQVSQL
GLQKLVTVVGHGAEMVQEQLGNVSEFALQAEQLGTAHAVDQAAGVLANEEGTTLVICG
DTPLITAETMEALLQQHKEAGAMATVLTAYIEEPAGYGRIVRNENGHVEKIVEHKDAN
EKELAIKEINTGTYCFDNKALFASLSKVSNDNVQGEYYLPDVIEILKNEGHIVSAYQT
EHFDETLGVNDRVALSQAEIIMKNRINRKNMVNGVTIIDPSNTYISADAIIGSDTVLH
PGTIIEGNTVIGSDCEIGPHTVIRDSEIGDRTTIRQSTVHDSKLGTEVSVGPFAHIRP
DSVIGDEVRVGNFVEIKKTVFGNRSKASHLSYIGDAQVGEDVNLGCGSITVNYDGKNK
FKTVIGNGVFIGCNSNLVAPVTVEDGAYVAAGSTITENVPSKALSVARARQVNKEDYV
DQLLNKKKS"
misc_feature 51018..52388
/gene="glmU"
/locus_tag="BAMEG_0059"
/note="bifunctional N-acetylglucosamine-1-phosphate
uridyltransferase/glucosamine-1-phosphate
acetyltransferase; Provisional; Region: glmU; PRK14354"
/db_xref="CDD:184643"
misc_feature 51027..51710
/gene="glmU"
/locus_tag="BAMEG_0059"
/note="N-terminal domain of bacterial GlmU; Region:
GT2_GlmU_N_bac; cd02540"
/db_xref="CDD:133020"
misc_feature order(51036..51044,51165..51167,51246..51248,51255..51257,
51312..51314,51318..51320)
/gene="glmU"
/locus_tag="BAMEG_0059"
/note="Substrate binding site; other site"
/db_xref="CDD:133020"
misc_feature order(51318..51320,51693..51695)
/gene="glmU"
/locus_tag="BAMEG_0059"
/note="Mg++ binding site; other site"
/db_xref="CDD:133020"
misc_feature 51765..52340
/gene="glmU"
/locus_tag="BAMEG_0059"
/note="N-acetyl-glucosamine-1-phosphate uridyltransferase
(GlmU), C-terminal left-handed beta-helix (LbH)
acetyltransferase domain: GlmU is also known as
UDP-N-acetylglucosamine pyrophosphorylase. It is a
bifunctional bacterial enzyme that catalyzes two...;
Region: LbH_GlmU_C; cd03353"
/db_xref="CDD:100044"
misc_feature order(52008..52010,52056..52058,52062..52064,52098..52100,
52107..52109,52140..52151,52164..52172,52185..52187,
52215..52217,52221..52226,52275..52280,52329..52331)
/gene="glmU"
/locus_tag="BAMEG_0059"
/note="active site"
/db_xref="CDD:100044"
misc_feature order(52008..52010,52056..52058,52062..52064,52098..52100,
52107..52109,52140..52148,52167..52169,52185..52187)
/gene="glmU"
/locus_tag="BAMEG_0059"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100044"
misc_feature order(52149..52151,52164..52166,52170..52172,52221..52226,
52275..52280,52329..52331)
/gene="glmU"
/locus_tag="BAMEG_0059"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:100044"
gene 52410..53363
/gene="prsA"
/locus_tag="BAMEG_0060"
/db_xref="GeneID:7785233"
CDS 52410..53363
/gene="prsA"
/locus_tag="BAMEG_0060"
/EC_number="2.7.6.1"
/note="catalyzes the formation of 5-phospho-alpha-D-ribose
1-phosphate from D-ribose 5-phosphate and ATP"
/codon_start=1
/transl_table=11
/product="ribose-phosphate pyrophosphokinase"
/protein_id="YP_002812733.1"
/db_xref="GI:227812724"
/db_xref="GeneID:7785233"
/translation="MSTQYLNSNLKVFSLNSNKELAEQIAKHIGVGLGKCSVDRFSDG
EVQINIEESIRGCDVFIIQSTSFPVNEHIMELLIMIDALKRASAKTINIVIPYYGYAR
QDRKARSREPITSKLVANLLETAGATRVITLDLHAPQIQGFFDIPIDHLMGVPILSDY
FETKGLKDIVIVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVSEVMNIIGNIEGK
TAILIDDIIDTAGTITLAANALVENGASEVYACCTHPVLSGPAIERIQNSNIKELVVT
NSIVLPEEKKIDKVHELSVAPLIGEAIIRVYEEESVSVLFN"
misc_feature 52437..53360
/gene="prsA"
/locus_tag="BAMEG_0060"
/note="ribose-phosphate pyrophosphokinase; Provisional;
Region: PRK01259"
/db_xref="CDD:179265"
misc_feature 52437..52787
/gene="prsA"
/locus_tag="BAMEG_0060"
/note="N-terminal domain of ribose phosphate
pyrophosphokinase; Region: Pribosyltran_N; pfam13793"
/db_xref="CDD:205966"
misc_feature 52869..53243
/gene="prsA"
/locus_tag="BAMEG_0060"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(52932..52934,52938..52940,53079..53087,53091..53105,
53175..53177)
/gene="prsA"
/locus_tag="BAMEG_0060"
/note="active site"
/db_xref="CDD:206754"
gene 53373..53996
/gene="spoVC"
/locus_tag="BAMEG_0061"
/db_xref="GeneID:7786260"
CDS 53373..53996
/gene="spoVC"
/locus_tag="BAMEG_0061"
/EC_number="3.1.1.29"
/note="Enables the recycling of peptidyl-tRNAs produced at
termination of translation"
/codon_start=1
/transl_table=11
/product="peptidyl-tRNA hydrolase"
/protein_id="YP_002812734.1"
/db_xref="GI:227812725"
/db_xref="GeneID:7786260"
/translation="MRRNQDWLRLFVSKKESSGTRMKLIVGLGNPGREYELTRHNIGF
MAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKI
DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLGTQEFQRIRMGIDRPKNG
MKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS"
misc_feature 53442..53954
/gene="spoVC"
/locus_tag="BAMEG_0061"
/note="Peptidyl-tRNA hydrolase (PTH) is a monomeric
protein that cleaves the ester bond linking the nascent
peptide and tRNA when peptidyl-tRNA is released
prematurely from the ribosome. This ensures the recycling
of peptidyl-tRNAs into tRNAs produced through...; Region:
PTH; cd00462"
/db_xref="CDD:73208"
misc_feature order(53460..53462,53490..53492,53625..53630,53706..53708,
53766..53768)
/gene="spoVC"
/locus_tag="BAMEG_0061"
/note="putative active site [active]"
/db_xref="CDD:73208"
misc_feature 53490..53492
/gene="spoVC"
/locus_tag="BAMEG_0061"
/note="catalytic residue [active]"
/db_xref="CDD:73208"
gene 54067..54291
/locus_tag="BAMEG_0062"
/db_xref="GeneID:7784156"
CDS 54067..54291
/locus_tag="BAMEG_0062"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812735.1"
/db_xref="GI:227812726"
/db_xref="GeneID:7784156"
/translation="MEGYYYCRHCGSNVGSVTAEKVYSDVLFQLTEQEVVEMIHFHEN
GNIYIKTICELCQETLASYPEYYEYEKFLQ"
misc_feature 54067..54288
/locus_tag="BAMEG_0062"
/note="Protein of unknown function (DUF2757); Region:
DUF2757; pfam10955"
/db_xref="CDD:151402"
gene 54397..57927
/gene="mfd"
/locus_tag="BAMEG_0063"
/db_xref="GeneID:7786995"
CDS 54397..57927
/gene="mfd"
/locus_tag="BAMEG_0063"
/EC_number="3.6.1.-"
/note="identified by match to protein family HMM PF00270;
match to protein family HMM PF00271; match to protein
family HMM PF02559; match to protein family HMM PF03461;
match to protein family HMM PF04851; match to protein
family HMM TIGR00580"
/codon_start=1
/transl_table=11
/product="transcription-repair coupling factor"
/protein_id="YP_002812736.1"
/db_xref="GI:227812727"
/db_xref="GeneID:7786995"
/translation="MIGLLEQFYKNEEIQSVINGLEDGLKEQLVSGMATSSRSFLMAA
LYKKTKKSQLIVTHNLYQAQKVHEDLVALLGEKDVWLYPVNELIASELGVASPELKAQ
RIEVLNRLAAGEHGIIVAPVAGLRRFLPMKELWKQRQIEISLGQEIDLDTFLHTLHHI
GYERKSMVEAPGEFSLRGGILDIYPLTEELPFRIEFFDTEVDSIRLFDVDEQRSQDKK
ESVRFGPATEFLFSQEELKSGIKHLEEGLTKTMQKLSDDKLKTTVLETVSHEIEMLKN
GQSIEQMFKYLSIFYNEPASLIDYLPEDGVVILDEISRIQETASHLESEEAEWYISLL
GEGTIIQDLSFSHSFEEFLHHKKRSFVYLTLFLRHIAHTHPQNIVNVTCKTMQDFHGQ
MQLLKTEIDRWNEGHFTTVVLGTDDERVKKLQHILSDYDIDADIVEGTDILLPGRLQI
AVGDLHAGFEMPMQKLVVITEKELFHKKVKKSQRKQKLSNAERIKSYSELKVGDYVVH
VNHGIGKFLGIETLEINGVHKDYLNIKYQGNDKLYVPIEQIDQVQKYVGSEGKDPKVY
KLGGNDWKKVKTKVEKSVQDIADDLIKLYAEREASKGYAYTPDTAEQQEFESSFPYQE
TEDQLRSIEEIKKDMERGRPMDRLLCGDVGYGKTEVAIRAAFKAIMDEKQVAILVPTT
ILAQQHYETIRERFQDYPINIGLLSRFRTRKQQNETIKGLKDGTVDIVIGTHRILSKD
VTYKDLGLLIIDEEQRFGVTHKEKIKQLKANVDVLTLTATPIPRTLHMSMLGVRDLSV
IETPPENRFPVQTYVVEYNPALMREAIERELARGGQVYFLYNRVEDIERKADEISMLV
PDARVTYAHGKMNESELESVMLSFLEGQHDVLVSTTIIETGVDIPNVNTLIVFDADRM
GLSQLYQLRGRVGRSNRVAYAYFAYKRDKVLSEVAEKRLQAIKEFTELGSGFKIAMRD
LSIRGAGNLLGAEQHGFIDSVGFDLYSQMLKDAIEQRRGTDGVENTVNVEIDLEVDAY
LPDAYISDSKQKIMMYKQFRGVSAIEDIEELQEEMIDRFGDYPQEVGYLLQIANIKVL
AMKEQIELIKQNKFEVTILFSEQASQNIDGGKLFMLGNSFGRMIGLGMEGSQLKIVMK
TNGLETSKWLTIAENLLKGLPDVKKEVINA"
misc_feature 54466..57912
/gene="mfd"
/locus_tag="BAMEG_0063"
/note="Transcription-repair coupling factor (superfamily
II helicase) [DNA replication, recombination, and repair /
Transcription]; Region: Mfd; COG1197"
/db_xref="CDD:31390"
misc_feature 55891..56184
/gene="mfd"
/locus_tag="BAMEG_0063"
/note="CarD-like/TRCF domain; Region: CarD_CdnL_TRCF;
pfam02559"
/db_xref="CDD:202283"
misc_feature 56329..56739
/gene="mfd"
/locus_tag="BAMEG_0063"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 56356..56370
/gene="mfd"
/locus_tag="BAMEG_0063"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 56650..56661
/gene="mfd"
/locus_tag="BAMEG_0063"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature 56818..57207
/gene="mfd"
/locus_tag="BAMEG_0063"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(56914..56925,56989..56994,57067..57075)
/gene="mfd"
/locus_tag="BAMEG_0063"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(57091..57093,57157..57159,57169..57171,57178..57180)
/gene="mfd"
/locus_tag="BAMEG_0063"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
misc_feature 57466..57765
/gene="mfd"
/locus_tag="BAMEG_0063"
/note="TRCF domain; Region: TRCF; pfam03461"
/db_xref="CDD:202647"
gene 58063..58599
/gene="spoVT"
/locus_tag="BAMEG_0064"
/db_xref="GeneID:7786130"
CDS 58063..58599
/gene="spoVT"
/locus_tag="BAMEG_0064"
/note="identified by match to protein family HMM PF04014;
match to protein family HMM TIGR01439; match to protein
family HMM TIGR02851"
/codon_start=1
/transl_table=11
/product="stage V sporulation protein T"
/protein_id="YP_002812737.1"
/db_xref="GI:227812728"
/db_xref="GeneID:7786130"
/translation="MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEV
ILKKYSPISELGDFAKEYAEALYDSLGHNVLVCDRDSIIAVSGVSKKEYLNKSVGDLI
EKTMEERKSVIMTDESDVSIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEI
EHKAVNTAASFLAKQMEQ"
misc_feature 58066..58593
/gene="spoVT"
/locus_tag="BAMEG_0064"
/note="stage V sporulation protein T; Region: spore_V_T;
TIGR02851"
/db_xref="CDD:131898"
misc_feature 58084..58224
/gene="spoVT"
/locus_tag="BAMEG_0064"
/note="Antidote-toxin recognition MazE; Region:
Antitoxin-MazE; pfam04014"
/db_xref="CDD:202852"
gene 58830..60431
/locus_tag="BAMEG_0065"
/db_xref="GeneID:7785026"
CDS 58830..60431
/locus_tag="BAMEG_0065"
/note="identified by match to protein family HMM PF01554;
match to protein family HMM PF01943; match to protein
family HMM PF03023"
/codon_start=1
/transl_table=11
/product="polysaccharide synthase family protein"
/protein_id="YP_002812738.1"
/db_xref="GI:227812729"
/db_xref="GeneID:7785026"
/translation="MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFY
IYQQIYPFYGFCLILATYGFPIIISKMVAERLERGKKQEAEEIICVSFWFLLGIGFIG
FFTLFFGAEVIATAMGDIHLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQV
IEQTIRVSIIVFLSLFLIAHEFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIF
FKSVKRIKGKKKIIKILFWQGLAICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKV
LKGVYDRSIPLMQLGTVVTTSFSLSLIPIITAAKERGDLTFIREKVRLAMKITFVIGF
AAAIGLTCIIQPTNIMLFENSDGSDVLSILSLSILFSSLSITTASILQGLGQTLKPAI
FVVFGGCLKLVLNYILMPYFGAKGAAIATLVALIVISVLNSMLLMRAVSESLIDKRNM
LGIVISGFSMGFVLIMFMRVLQMSGLVMDTSHRGVATFEALLGVAIGGLAYMFLILKL
RVFTKAEIGTVMKKEKKEGSLKKSG"
misc_feature 58854..60053
/locus_tag="BAMEG_0065"
/note="stage V sporulation protein B; Region: spore_V_B;
TIGR02900"
/db_xref="CDD:163065"
misc_feature 58854..>59348
/locus_tag="BAMEG_0065"
/note="MatE; Region: MatE; cl10513"
/db_xref="CDD:209159"
gene 60444..61904
/locus_tag="BAMEG_0066"
/db_xref="GeneID:7782839"
CDS 60444..61904
/locus_tag="BAMEG_0066"
/note="identified by match to protein family HMM PF00590;
match to protein family HMM PF03819; match to protein
family HMM TIGR00444"
/codon_start=1
/transl_table=11
/product="tetrapyrrole methylase"
/protein_id="YP_002812739.1"
/db_xref="GI:227812730"
/db_xref="GeneID:7782839"
/translation="MSGIITILGLGAGELDQLTMGVYRKIKEADHMFVRTKEHPVIEE
LEKEGIQYTAFDNVYEAHDTFEIVYETIANTLIEKAEGTEIIYAVPGHPLVAERTVQL
LLEKGEVANIEVRIEGGQSFLDPMFASLKIDPIEGFQLIDATSFERGQLELRQHLIFC
QVYDAFVASDVKLTLMEMLPDDYEVYIVTAAGTSFEQVKKVPLYMLDHETELNNLTSV
YVPPVQERASLYQQFDVLREIIADLRGPNGCPWDKKQTHQSLKKYLIEEAYEVLEAID
EEDDDHLVEELGDILLQVMLHAQIGEDEGWFSIDDIIRTLSEKMVRRHPHVFGNTDVD
NADEVIANWEEIKKQEKGFVKESVLDGVPKSLPQLLRAYEIQKKAGKVGFDWVDVQPM
IEKALEEWQEFQQEVTNMDEAKMLSEFGDLLFAFVNIARHYKIDPEEALHSTNEKFVG
RFLYMEAKVAEMNKEMQDLSLEQLDVLWEEAKQTER"
misc_feature 60444..61901
/locus_tag="BAMEG_0066"
/note="Protein containing tetrapyrrole methyltransferase
domain and MazG-like (predicted pyrophosphatase) domain
[General function prediction only]; Region: COG3956"
/db_xref="CDD:33737"
misc_feature 60456..61112
/locus_tag="BAMEG_0066"
/note="N-terminal S-AdoMet dependent methylase domain of
Bacillus subtilis YabN and related proteins; Region:
YabN_N; cd11723"
/db_xref="CDD:212509"
misc_feature order(60477..60479,60711..60719,60726..60731,60804..60809,
60921..60923,61005..61007,61011..61016,61086..61094)
/locus_tag="BAMEG_0066"
/note="putative SAM binding site [chemical binding]; other
site"
/db_xref="CDD:212509"
misc_feature order(60495..60506,60510..60512,60717..60734,60744..60749,
60753..60758,60789..60791,60795..60806,60810..60815,
60822..60827,60861..60875)
/locus_tag="BAMEG_0066"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:212509"
misc_feature 61149..61484
/locus_tag="BAMEG_0066"
/note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
3.6.1.8) N-terminal tandem-domain of MazG proteins from
Escherichia coli and bacterial homologs; Region:
NTP-PPase_MazG_Nterm; cd11528"
/db_xref="CDD:212135"
misc_feature order(61149..61151,61158..61160,61212..61217,61224..61226,
61233..61238,61245..61250,61257..61259,61266..61268,
61281..61283,61290..61295,61302..61319,61323..61325,
61332..61334,61359..61361,61368..61382,61386..61394,
61398..61403)
/locus_tag="BAMEG_0066"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:212135"
misc_feature order(61242..61244,61251..61253,61299..61301,61308..61310)
/locus_tag="BAMEG_0066"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:212135"
misc_feature 61542..61889
/locus_tag="BAMEG_0066"
/note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
3.6.1.8) C-terminal tandem-domain of MazG proteins from
Escherichia coli and bacterial homologs'; Region:
NTP-PPase_MazG_Cterm; cd11529"
/db_xref="CDD:212136"
misc_feature order(61542..61550,61554..61559,61566..61568,61578..61580,
61587..61595,61629..61634,61650..61655,61686..61694,
61698..61706,61710..61715,61719..61721,61740..61748,
61755..61757,61761..61790,61797..61802,61809..61811,
61854..61856,61863..61865,61875..61877)
/locus_tag="BAMEG_0066"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:212136"
misc_feature order(61593..61601,61626..61628,61638..61640,61647..61649,
61683..61685,61692..61697,61704..61706)
/locus_tag="BAMEG_0066"
/note="active site"
/db_xref="CDD:212136"
misc_feature order(61635..61640,61647..61649,61692..61697,61704..61706)
/locus_tag="BAMEG_0066"
/note="putative chemical substrate binding site [chemical
binding]; other site"
/db_xref="CDD:212136"
misc_feature order(61638..61640,61647..61649,61695..61697,61704..61706)
/locus_tag="BAMEG_0066"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:212136"
gene 61919..62194
/locus_tag="BAMEG_0067"
/db_xref="GeneID:7784595"
CDS 61919..62194
/locus_tag="BAMEG_0067"
/note="identified by match to protein family HMM PF01479"
/codon_start=1
/transl_table=11
/product="S4 domain-containing protein"
/protein_id="YP_002812740.1"
/db_xref="GI:227812731"
/db_xref="GeneID:7784595"
/translation="MRLDKFLKVSRLIKRRTLAKEVADQGRISINGQVAKASSDVKVA
DELTIRFGQKIVTVKINELKETTKKEDAANMYSLVREEKVKAEEGLF"
misc_feature 61919..62095
/locus_tag="BAMEG_0067"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:29105"
misc_feature order(61922..61924,61958..61963,61967..61972,61976..61981,
61988..61993,61997..61999,62018..62023,62024..62038,
62042..62044)
/locus_tag="BAMEG_0067"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:29105"
gene 62253..62561
/gene="yabP"
/locus_tag="BAMEG_0068"
/db_xref="GeneID:7783987"
CDS 62253..62561
/gene="yabP"
/locus_tag="BAMEG_0068"
/note="identified by match to protein family HMM PF07873;
match to protein family HMM TIGR02892"
/codon_start=1
/transl_table=11
/product="sporulation protein YabP"
/protein_id="YP_002812741.1"
/db_xref="GI:227812732"
/db_xref="GeneID:7783987"
/translation="MNNGYSPMSSNQQNVSVEHDIIMRGRRVIDITGVKQVESFDSEE
FLLETVMGFLTIRGQNLQMKNLDVEKGVVSIKGKVHEMLYIDENQGEKTKGFFSKLFK
"
misc_feature 62307..62558
/gene="yabP"
/locus_tag="BAMEG_0068"
/note="sporulation protein YabP; Region: spore_yabP;
TIGR02892"
/db_xref="CDD:163063"
gene 62594..63211
/gene="yabQ"
/locus_tag="BAMEG_0069"
/db_xref="GeneID:7784593"
CDS 62594..63211
/gene="yabQ"
/locus_tag="BAMEG_0069"
/note="identified by match to protein family HMM PF09578;
match to protein family HMM TIGR02893"
/codon_start=1
/transl_table=11
/product="spore cortex biosynthesis protein YabQ"
/protein_id="YP_002812742.1"
/db_xref="GI:227812733"
/db_xref="GeneID:7784593"
/translation="MIGMGAWIGASLDTYQRFLKRQERKRWLVFIHDILFWIVQALFV
FYVLLLVNEAELRIYVFLALLCGFAAYQSLLKAIYMRLLNFLIYIFVQTTHFFVQIIK
LLMIKPVIIIAQLFIAFILFLFRILLSIGHVLWKMVIWILLFIWKVFFWPVRFIASLI
WKLLPNRVKLFIMKHVGFLQYIAKLKGHIFQLWERIKKKLGGPRK"
misc_feature 62594..62920
/gene="yabQ"
/locus_tag="BAMEG_0069"
/note="spore cortex biosynthesis protein YabQ; Region:
spore_yabQ; TIGR02893"
/db_xref="CDD:131939"
gene 63208..63567
/gene="divIC1"
/locus_tag="BAMEG_0070"
/db_xref="GeneID:7783932"
CDS 63208..63567
/gene="divIC1"
/locus_tag="BAMEG_0070"
/note="identified by match to protein family HMM PF04977"
/codon_start=1
/transl_table=11
/product="cell division protein DivIC"
/protein_id="YP_002812743.1"
/db_xref="GI:227812734"
/db_xref="GeneID:7783932"
/translation="MRELRQRTIEKQSPNPVKEHIIQTDENRKRLYRRLAVFLVFAFT
IIASISVTFYQQNSSIKAKEAKVKDMKKELDSLTNKEKSLKDEVQKLNDEEYVLKIAR
RDYFFSGKGEIIFPVSK"
misc_feature 63310..63564
/gene="divIC1"
/locus_tag="BAMEG_0070"
/note="Septum formation initiator; Region: DivIC;
pfam04977"
/db_xref="CDD:203138"
gene 63655..64137
/locus_tag="BAMEG_0071"
/db_xref="GeneID:7787456"
CDS 63655..64137
/locus_tag="BAMEG_0071"
/note="identified by match to protein family HMM PF00575"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812744.1"
/db_xref="GI:227812735"
/db_xref="GeneID:7787456"
/translation="MSIEVGSKLQGKVTGITNFGAFVELPEGLTGLVHISEVADNYVK
DINDHLKVGDQVEVKVINVEKDGKIGLSIKKAKEREKTEGDRPRGEYQRGGDQQRSGR
PQRNRSFNRDNRGGGNDRAPKETFEQKMARFLKDSEDRLTSLKRNTESKRGGRGARRG
"
misc_feature 63655..64134
/locus_tag="BAMEG_0071"
/note="hypothetical protein; Provisional; Region:
PRK08582"
/db_xref="CDD:181488"
misc_feature 63670..63876
/locus_tag="BAMEG_0071"
/note="S1_RPS1_repeat_hs4: Ribosomal protein S1 (RPS1)
domain. RPS1 is a component of the small ribosomal subunit
thought to be involved in the recognition and binding of
mRNA's during translation initiation. The bacterial RPS1
domain architecture consists of...; Region:
S1_RPS1_repeat_hs4; cd05692"
/db_xref="CDD:88447"
misc_feature order(63694..63696,63718..63720,63748..63750,63754..63756)
/locus_tag="BAMEG_0071"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88447"
gene 64297..64375
/locus_tag="BAMEG_0072"
/db_xref="GeneID:7783516"
tRNA 64297..64375
/locus_tag="BAMEG_0072"
/product="tRNA-Met"
/db_xref="GeneID:7783516"
gene 64385..64459
/locus_tag="BAMEG_0073"
/db_xref="GeneID:7785690"
tRNA 64385..64459
/locus_tag="BAMEG_0073"
/product="tRNA-Glu"
/db_xref="GeneID:7785690"
gene 64716..67187
/gene="spoIIE"
/locus_tag="BAMEG_0074"
/db_xref="GeneID:7785677"
CDS 64716..67187
/gene="spoIIE"
/locus_tag="BAMEG_0074"
/EC_number="3.1.3.16"
/note="identified by match to protein family HMM PF07228;
match to protein family HMM TIGR02865"
/codon_start=1
/transl_table=11
/product="stage II sporulation protein E"
/protein_id="YP_002812745.1"
/db_xref="GI:227812736"
/db_xref="GeneID:7785677"
/translation="MPKAGRNTMNTSALAMNEGQLGGVKWTSKLRMKFEQVFFRWGFI
IVVIGFLLGRAYILTNILPFALPFFAAVYVMKRDKMPLAFLALMGGALSVSIDNLFFT
FASIFTFFIYNIFFSRFTRKTVGLVPFQVFISALTAHLVVVYFAQQTVTMYDLLVSTI
EAGLSFVLTMIFLQSVPLLVERKGKQQALETEEIVCLIILLASVLTGTTDWFVYDASI
QHIFTRYLVLVFAFIAGAATGSTVGVVTGLILSLANVSSLSQLSLLAFSGLLGGLLKE
GKRIGVSLGLLIGTSLITLYVDKQTNIVTTLIESGVAIAFFLLTPKLVMDRIAKFMPG
TQEHSQDQQQYLRRMRDVTANKINQFANVFAALSNSFSVYGYVEEEDKETEADLFLST
ITAKTCQTCFKKDQCWVVNFDKTYDYMKQIMSETEEGTLQHNRKLVREWDKHCVRGKK
VTDLVAGELDHFYEGQKLRKQMKENRRIVAEQLLGVSKVMEDFAKEIQRERENHQVQE
EQILQAFRDFGVEIEHVDIYCLDRGSIDIEMLIPVASNEHGECEKLVAPMLSDILKEN
IVVKHEEKSSYPNGHSLISFGSAKTYSLDTGLATAAKGGGFVSGDSYAMMDLSVGKYA
LAISDGMGNGQRAHMESKETVKLLQKILQSGIDEEIAIKSINSILSLRTTEEMFTTLD
LAMVDLRDASAKFLKIGSTPSFVKRANNILKIEASNLPMGIIEDVEVDVVGEQLKTGD
ILIMMSDGIFEGAQHVENHELWMKRKIKELQTEDPQEIADIIMEEVIRSGDGYINDDM
TIVVAKVKKNMPKWATIPIVGMQAQ"
misc_feature 64842..67133
/gene="spoIIE"
/locus_tag="BAMEG_0074"
/note="stage II sporulation protein E; Region: spore_II_E;
TIGR02865"
/db_xref="CDD:163048"
misc_feature 66576..67133
/gene="spoIIE"
/locus_tag="BAMEG_0074"
/note="Stage II sporulation protein E (SpoIIE); Region:
SpoIIE; pfam07228"
/db_xref="CDD:203597"
gene 67421..68851
/gene="tilS"
/locus_tag="BAMEG_0075"
/db_xref="GeneID:7783043"
CDS 67421..68851
/gene="tilS"
/locus_tag="BAMEG_0075"
/EC_number="6.-.-.-"
/note="identified by match to protein family HMM PF01171;
match to protein family HMM PF06508; match to protein
family HMM TIGR02432; match to protein family HMM
TIGR02433"
/codon_start=1
/transl_table=11
/product="tRNA(Ile)-lysidine synthetase"
/protein_id="YP_002812746.1"
/db_xref="GI:227812737"
/db_xref="GeneID:7783043"
/translation="MKDTFVEKVDDFVRQHDVLKERSTIVVGVSGGPDSLALLYYLLE
KRAAKQFEIVVAHVDHMFRGDESHEDLQFVQDLCKGLGVICETIRINVSQYQKQYGMN
AQVAARECRYAFLERIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKR
PFHNGYLIRPLLGVTKEEIVNYCNELKIIPRIDPSNKKEVYTRNRLRKYVLPHLKEEN
PQVHEKFQKFSMQMQEDEAYLQELAFEKMNKVITKKSDKQISLSIPTFESMSMPLQRR
GIQLILNYLYEYKIPSSLSSIHIDKVIEFFKRTQPSGSLDFPGDLKIVRAYEECSFGF
KQEIVSPFLQDLSVPGTITLSNGDKLVTEVSEDIPSDMNETVFVAKYNDISYPIRIRS
RENGDRMSIQGMNGTKKIKAIFIEAKVPREKREEWPVVCDASGNIIWLPLLKRSAFAI
SKETAKKDKYMIIHYKSKESSGRIMK"
misc_feature 67421..68191
/gene="tilS"
/locus_tag="BAMEG_0075"
/note="tRNA(Ile)-lysidine synthase MesJ [Cell cycle
control, cell division, chromosome partitioning]; Region:
MesJ; COG0037"
/db_xref="CDD:30386"
misc_feature 67490..68056
/gene="tilS"
/locus_tag="BAMEG_0075"
/note="N-terminal domain of predicted ATPase of the
PP-loop faimly implicated in cell cycle control [Cell
division and chromosome partitioning]. This is a subfamily
of Adenine nucleotide alpha hydrolases
superfamily.Adeninosine nucleotide alpha hydrolases...;
Region: PP-ATPase; cd01992"
/db_xref="CDD:30179"
misc_feature order(67502..67510,67514..67525,67589..67591,67595..67597)
/gene="tilS"
/locus_tag="BAMEG_0075"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30179"
misc_feature 68201..68416
/gene="tilS"
/locus_tag="BAMEG_0075"
/note="TilS substrate binding domain; Region: TilS;
pfam09179"
/db_xref="CDD:204159"
misc_feature 68582..68791
/gene="tilS"
/locus_tag="BAMEG_0075"
/note="TilS substrate C-terminal domain; Region: TilS_C;
smart00977"
/db_xref="CDD:198045"
gene 68848..69390
/gene="hpt"
/locus_tag="BAMEG_0076"
/db_xref="GeneID:7782513"
CDS 68848..69390
/gene="hpt"
/locus_tag="BAMEG_0076"
/EC_number="2.4.2.8"
/note="identified by match to protein family HMM PF00156;
match to protein family HMM TIGR01203"
/codon_start=1
/transl_table=11
/product="hypoxanthine phosphoribosyltransferase"
/protein_id="YP_002812747.1"
/db_xref="GI:227812738"
/db_xref="GeneID:7782513"
/translation="MMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKG
AMPFMADLLKRTDTYLEMDFMAVSSYGHSTVSTGEVKILKDLDTSVEGRDILIVEDII
DSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGRKVDLKADYVGFTVPHEFVVGYGLDY
KEQYRNLPYVGVLKPSVYSN"
misc_feature 68911..69288
/gene="hpt"
/locus_tag="BAMEG_0076"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(68971..68973,68977..68979,69142..69150,69154..69168,
69238..69240)
/gene="hpt"
/locus_tag="BAMEG_0076"
/note="active site"
/db_xref="CDD:206754"
gene 69476..71377
/gene="ftsH"
/locus_tag="BAMEG_0077"
/db_xref="GeneID:7782340"
CDS 69476..71377
/gene="ftsH"
/locus_tag="BAMEG_0077"
/EC_number="3.4.24.-"
/note="identified by match to protein family HMM PF00004;
match to protein family HMM PF01434; match to protein
family HMM PF06480; match to protein family HMM PF07728;
match to protein family HMM TIGR01241"
/codon_start=1
/transl_table=11
/product="cell division protein FtsH"
/protein_id="YP_002812748.1"
/db_xref="GI:227812739"
/db_xref="GeneID:7782340"
/translation="MNRIFRNTIFYLLIFLVVIGIVSYFNGSTQKTTSVSYDKFITKL
EKGEVRNVQLQPKNGVFEVKGQFNNSSQGEQFVTYAPNTEELQKKINDKAQGAEVKYQ
PAEETSAWVTFFTSIIPFVIIFILFFFLLNQAQGGGSRVMNFGKSKAKLYNDEKKKVR
FRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGE
AGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGG
GHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDV
NGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDM
SDIDEATDRVIAGPAKKSRVISEKERNIVAFHEAGHTVIGVVLDEADVVHKVTIVPRG
QAGGYAVMLPKEDRYFMTKPELLDKITGLLGGRVAEEIVFGEVSTGAHNDFQRATGIA
RRMVTEFGMSDKLGPMQFGSSQGGQVFLGRDFHSEQNYSDAIAHEIDMEMQTIMKECY
ARAKQILTDNRDKLDLIAKTLLEVETLDAEQINHLCDYGRLPERPTSSADVKVNINMK
KDDEESEDK"
misc_feature 69500..69778
/gene="ftsH"
/locus_tag="BAMEG_0077"
/note="FtsH Extracellular; Region: FtsH_ext; pfam06480"
/db_xref="CDD:203464"
misc_feature 69869..71278
/gene="ftsH"
/locus_tag="BAMEG_0077"
/note="ATP-dependent metalloprotease FtsH; Region:
FtsH_fam; TIGR01241"
/db_xref="CDD:162266"
misc_feature 69968..70465
/gene="ftsH"
/locus_tag="BAMEG_0077"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 70079..70102
/gene="ftsH"
/locus_tag="BAMEG_0077"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(70082..70105,70256..70258,70397..70399)
/gene="ftsH"
/locus_tag="BAMEG_0077"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 70244..70261
/gene="ftsH"
/locus_tag="BAMEG_0077"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 70439..70441
/gene="ftsH"
/locus_tag="BAMEG_0077"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 70646..71278
/gene="ftsH"
/locus_tag="BAMEG_0077"
/note="Peptidase family M41; Region: Peptidase_M41;
pfam01434"
/db_xref="CDD:201796"
gene 71602..72390
/gene="coaX"
/locus_tag="BAMEG_0078"
/db_xref="GeneID:7786454"
CDS 71602..72390
/gene="coaX"
/locus_tag="BAMEG_0078"
/EC_number="2.7.1.33"
/note="type III; catalyzes the formation of
(R)-4'-phosphopantothenate from (R)-pantothenate in
coenzyme A biosynthesis; type III pantothenate kinases are
not subject to feedback inhibition from coenzyme A and
have a high Km for ATP"
/codon_start=1
/transl_table=11
/product="pantothenate kinase"
/protein_id="YP_002812749.1"
/db_xref="GI:227812740"
/db_xref="GeneID:7786454"
/translation="MIFVLDVGNTNAVLGVFEEGELRQHWRMETDRHKTEDEYGMLVK
QLLEHEGLSFEDVKGIIVSSVVPPIMFALERMCEKYFKIKPLVVGPGIKTGLNIKYEN
PREVGADRIVNAVAGIHLYGSPLIIVDFGTATTYCYINEEKHYMGGVITPGIMISAEA
LYSRAAKLPRIEITKPSSVVGKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVI
ATGGLAKLISEESNVIDVVDPFLTLKGLYMLYERNANLQHEKGE"
misc_feature 71602..72372
/gene="coaX"
/locus_tag="BAMEG_0078"
/note="pantothenate kinase; Reviewed; Region: PRK13318"
/db_xref="CDD:183972"
gene 72397..73272
/gene="hslO"
/locus_tag="BAMEG_0079"
/db_xref="GeneID:7783042"
CDS 72397..73272
/gene="hslO"
/locus_tag="BAMEG_0079"
/note="becomes active under oxidative stress; four
conserved cysteines bind a zinc atom when they are in the
reduced state and the enzyme is inactive; oxidative stress
results in oxidized cysteines, release of zinc, and
binding of Hsp33 to aggregation-prone proteins; forms
dimers and higher order oligomers"
/codon_start=1
/transl_table=11
/product="Hsp33-like chaperonin"
/protein_id="YP_002812750.1"
/db_xref="GI:227812741"
/db_xref="GeneID:7783042"
/translation="MKDYLVKALAFDGEVRAYSVRTTNTVSEAQRRHDTWRTASAALG
RSLTAGTMMGAMLKGDQKLTIKVEGNGPIGPILVDAHANGDVRGYVTNPHVDFEGTEQ
GKLRVYQAVGTEGFVTVIKDIGMREPFIGQSPIVSGELGEDFTYYFAVSEQTPSSVGV
GVLVNGDDSILAAGGFILQIMPGAQEETISFIEERLQKIPPVSTLIEQGLSPEELLYA
VLGEDKVKVLETMDVQFNCTCSRERIESVLISLGKTELEQVREEEEETEVHCHFCNER
YKFSKEDITNLIENL"
misc_feature 72397..73269
/gene="hslO"
/locus_tag="BAMEG_0079"
/note="Hsp33-like chaperonin; Reviewed; Region: hslO;
PRK00114"
/db_xref="CDD:178874"
misc_feature 72409..73236
/gene="hslO"
/locus_tag="BAMEG_0079"
/note="Heat shock protein 33 (Hsp33): Cytosolic protein
that acts as a molecular chaperone under oxidative
conditions. In normal (reducing) cytosolic conditions,
four conserved Cys residues are coordinated by a Zn ion.
Under oxidative stress (such as heat...; Region: Hsp33;
cd00498"
/db_xref="CDD:29605"
misc_feature order(72442..72444,72835..72837,72847..72855,72931..72933,
73105..73107)
/gene="hslO"
/locus_tag="BAMEG_0079"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29605"
misc_feature order(72442..72444,72913..72915,72919..72921,72931..72942)
/gene="hslO"
/locus_tag="BAMEG_0079"
/note="domain crossover interface; other site"
/db_xref="CDD:29605"
misc_feature order(73105..73107,73111..73113,73204..73206,73213..73215)
/gene="hslO"
/locus_tag="BAMEG_0079"
/note="redox-dependent activation switch; other site"
/db_xref="CDD:29605"
gene 73377..74300
/gene="cysK1"
/locus_tag="BAMEG_0080"
/db_xref="GeneID:7786637"
CDS 73377..74300
/gene="cysK1"
/locus_tag="BAMEG_0080"
/EC_number="2.5.1.47"
/note="identified by match to protein family HMM PF00291;
match to protein family HMM TIGR01136; match to protein
family HMM TIGR01139"
/codon_start=1
/transl_table=11
/product="cysteine synthase A"
/protein_id="YP_002812751.1"
/db_xref="GI:227812742"
/db_xref="GeneID:7786637"
/translation="MRVAQSVSELIGKTPIVKLNRIVESDSADIYLKLEFMNPGSSVK
DRIALAMIEDAEKKGLLKEGDTIIEPTSGNTGIGLAMVAAAKGYKAILVMPETMSVER
RNLLRAYGAELVLTPGPEGMGGAIRQATELAKEHGYFIPQQFKNQSNPEIHRLTTGPE
IVEQMGDQLDAFIAGIGTGGTITGAGEVLKEAYKDIKIYAVEPADSPVLSGGKPGPHK
IQGIGAGFVPETLDVEVYDEIIQVKTEQAFEYARRVAKEEGILVGISSGAVIYAATEV
AKKLGKGKKVLVIIPSNGERYLSTPLYQFES"
misc_feature 73383..74276
/gene="cysK1"
/locus_tag="BAMEG_0080"
/note="Cysteine synthase [Amino acid transport and
metabolism]; Region: CysK; COG0031"
/db_xref="CDD:30381"
misc_feature 73410..74273
/gene="cysK1"
/locus_tag="BAMEG_0080"
/note="CBS_like: This subgroup includes Cystathionine
beta-synthase (CBS) and Cysteine synthase. CBS is a unique
heme-containing enzyme that catalyzes a pyridoxal
5'-phosphate (PLP)-dependent condensation of serine and
homocysteine to give cystathionine; Region: CBS_like;
cd01561"
/db_xref="CDD:107204"
misc_feature order(73422..73430,73467..73469,73485..73487,73491..73493,
73617..73619,73626..73628,73674..73679,73686..73691,
73698..73703,73863..73868,74139..74147,74151..74159,
74229..74231,74259..74261,74268..74270)
/gene="cysK1"
/locus_tag="BAMEG_0080"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:107204"
misc_feature order(73506..73508,73596..73598,73902..73919,74037..74039,
74169..74171,74247..74252)
/gene="cysK1"
/locus_tag="BAMEG_0080"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:107204"
misc_feature 73506..73508
/gene="cysK1"
/locus_tag="BAMEG_0080"
/note="catalytic residue [active]"
/db_xref="CDD:107204"
gene 74521..75918
/gene="pabB"
/locus_tag="BAMEG_0081"
/db_xref="GeneID:7787222"
CDS 74521..75918
/gene="pabB"
/locus_tag="BAMEG_0081"
/EC_number="2.6.1.85"
/note="identified by match to protein family HMM PF00425;
match to protein family HMM PF04715"
/codon_start=1
/transl_table=11
/product="para-aminobenzoate synthase, component I"
/protein_id="YP_002812752.1"
/db_xref="GI:227812743"
/db_xref="GeneID:7787222"
/translation="MQRRKSLALSIPYQLDFFKQYKFLSKDKPQHILLESGRGGRYNI
VGLNPVAVIRGKGEALHISESGKETIKQGNPLDLMQEYMERWKTDYNPEYPPFQGGAI
GYFSYDCIRYIEKLPSLAEDDINIPDIFFLLFDDVFVYDQKEKVLWIITHYVDKHEEA
KERLNEWKILWATEAPEVTIPFACPEKKNEAVAFTEESFMKAVECIQEYIGAGDVFQV
NLSTRQERTLQTHPLEIYTSLREINPSPYMGYLELGDFQIVSGSPELLIKKQGTEVST
RPIAGTRSRGANEQEDEELARELIENEKERAEHVMLVDLERNDLGRVCKYGTVEVDEF
MVIEKYSHVMHIVSNVRGEVEEDKDAFDLVKAVFPGGTITGAPKIRTMEIIEELEPVR
RGIYTGSIGWIGYSGDTELNIVIRTLLAKDGKAHVQAGAGIVIDSNPENEYKESLKKA
IALWRAKERSEETVR"
misc_feature 74587..75894
/gene="pabB"
/locus_tag="BAMEG_0081"
/note="anthranilate synthase component I,
non-proteobacterial lineages; Region: trpE_most;
TIGR00564"
/db_xref="CDD:161932"
misc_feature 74596..>74883
/gene="pabB"
/locus_tag="BAMEG_0081"
/note="Anthranilate synthase component I, N terminal
region; Region: Anth_synt_I_N; pfam04715"
/db_xref="CDD:203074"
misc_feature 75103..75867
/gene="pabB"
/locus_tag="BAMEG_0081"
/note="chorismate binding enzyme; Region: Chorismate_bind;
pfam00425"
/db_xref="CDD:201219"
gene 75924..76511
/gene="pabA"
/locus_tag="BAMEG_0082"
/db_xref="GeneID:7783982"
CDS 75924..76511
/gene="pabA"
/locus_tag="BAMEG_0082"
/EC_number="4.1.3.27"
/note="amphibolic enzyme subunit from Bacillus subtilis
performs both in anthranilate and para-aminobenzoate
synthesis"
/codon_start=1
/transl_table=11
/product="para-aminobenzoate/anthranilate synthase
glutamine amidotransferase component II"
/protein_id="YP_002812753.1"
/db_xref="GI:227812744"
/db_xref="GeneID:7783982"
/translation="MILMIDNYDSFTFNLVQFLGELGQELVVKRNDEVTISDIENMKP
DFLMISPGPCSPNEAGISMDVIRYFAGKIPIFGVCLGHQSIAQVFGGEVVRAERLMHG
KTSPMHHDGKTIFSDIPNPFTATRYHSLIVKKETLPDCLEVTSWTEEGEIMALRHTTL
PIEGVQFHPESIMTSHGKELLQNFIRKYSPSVTSC"
misc_feature 75924..76484
/gene="pabA"
/locus_tag="BAMEG_0082"
/note="para-aminobenzoate synthase component II;
Provisional; Region: PRK08857"
/db_xref="CDD:181566"
misc_feature 75927..76478
/gene="pabA"
/locus_tag="BAMEG_0082"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in Anthranilate synthase; Region:
GATase1_Anthranilate_Synthase; cd01743"
/db_xref="CDD:153214"
misc_feature order(76074..76079,76083..76085,76158..76163,76170..76172,
76302..76313)
/gene="pabA"
/locus_tag="BAMEG_0082"
/note="glutamine binding [chemical binding]; other site"
/db_xref="CDD:153214"
misc_feature order(76158..76160,76425..76427,76431..76433)
/gene="pabA"
/locus_tag="BAMEG_0082"
/note="catalytic triad [active]"
/db_xref="CDD:153214"
gene 76505..77377
/gene="pabC"
/locus_tag="BAMEG_0083"
/db_xref="GeneID:7783436"
CDS 76505..77377
/gene="pabC"
/locus_tag="BAMEG_0083"
/note="catalyzes the formation of 4-aminobenzoate and
pyruvate from 4-amino-4-deoxychorismate"
/codon_start=1
/transl_table=11
/product="4-amino-4-deoxychorismate lyase"
/protein_id="YP_002812754.1"
/db_xref="GI:227812745"
/db_xref="GeneID:7783436"
/translation="MLIYVNGQYVKSSEARISPYDHGYLYGLGVFETFRIYNGHPFLL
DDHYDRLIDALDTLQIKWTMTKDEVLLILKNLLIKNKLENAYVRFNVSAGIDEIGLQT
EMYEEPSVIVFIKPLAAPGEVAEKEGVVLKQVRNTPEGAARLKSHHYLNNILGKREIG
NVVNKEGIFLTETGYVAEGIVSNLFFVKGDILYTPSLETGILNGITRAFIIKVAEELG
IKVKEGFFTKDELLSADEVFVTNSIQEIVPLNRIEERDFPGKVGMVTKRFINLYEMQR
EKLWSRNELRRGDV"
misc_feature 76508..77356
/gene="pabC"
/locus_tag="BAMEG_0083"
/note="4-amino-4-deoxychorismate lyase; Provisional;
Region: PRK07650"
/db_xref="CDD:181067"
misc_feature order(76571..76576,76580..76585,76589..76591,76595..76597,
76673..76675,76766..76768,76772..76774,76835..76837,
76943..76945,76955..76957,76961..76963,76973..76975,
77015..77017)
/gene="pabC"
/locus_tag="BAMEG_0083"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:29567"
misc_feature order(76595..76597,76652..76654,76937..76939,77036..77038,
77117..77122,77228..77230)
/gene="pabC"
/locus_tag="BAMEG_0083"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:29567"
misc_feature order(76652..76654,76937..76939,77036..77038)
/gene="pabC"
/locus_tag="BAMEG_0083"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:29567"
misc_feature 76937..76939
/gene="pabC"
/locus_tag="BAMEG_0083"
/note="catalytic residue [active]"
/db_xref="CDD:29567"
gene 77379..78212
/gene="folP"
/locus_tag="BAMEG_0084"
/db_xref="GeneID:7787136"
CDS 77379..78212
/gene="folP"
/locus_tag="BAMEG_0084"
/EC_number="2.5.1.15"
/note="identified by match to protein family HMM PF00809;
match to protein family HMM TIGR01496"
/codon_start=1
/transl_table=11
/product="dihydropteroate synthase"
/protein_id="YP_002812755.1"
/db_xref="GI:227812746"
/db_xref="GeneID:7787136"
/translation="MKWDYDLRCGEYTLNLNEKTLIMGILNVTPDSFSDGGSYNEVDA
AVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDT
YKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADM
IADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTS
RKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIGKGV
K"
misc_feature 77436..78185
/gene="folP"
/locus_tag="BAMEG_0084"
/note="DHPS subgroup of Pterin binding enzymes. DHPS
(dihydropteroate synthase), a functional homodimer,
catalyzes the condensation of p-aminobenzoic acid (pABA)
in the de novo biosynthesis of folate, which is an
essential cofactor in both nucleic acid and...; Region:
DHPS; cd00739"
/db_xref="CDD:29545"
misc_feature 77439..78191
/gene="folP"
/locus_tag="BAMEG_0084"
/note="dihydropteroate synthase; Region: DHPS; TIGR01496"
/db_xref="CDD:162390"
misc_feature order(77457..77459,77679..77681,77736..77738,77742..77744,
77811..77813,77928..77930,78024..78026,78036..78038,
78138..78140,78144..78146)
/gene="folP"
/locus_tag="BAMEG_0084"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29545"
misc_feature order(77967..77969,77979..77984,78096..78098,78108..78110,
78120..78122,78165..78170)
/gene="folP"
/locus_tag="BAMEG_0084"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29545"
misc_feature 78030..78038
/gene="folP"
/locus_tag="BAMEG_0084"
/note="inhibitor binding site; inhibition site"
/db_xref="CDD:29545"
gene 78213..78575
/gene="folB"
/locus_tag="BAMEG_0085"
/db_xref="GeneID:7783110"
CDS 78213..78575
/gene="folB"
/locus_tag="BAMEG_0085"
/EC_number="4.1.2.25"
/note="identified by match to protein family HMM PF02152;
match to protein family HMM TIGR00525; match to protein
family HMM TIGR00526"
/codon_start=1
/transl_table=11
/product="dihydroneopterin aldolase"
/protein_id="YP_002812756.1"
/db_xref="GI:227812747"
/db_xref="GeneID:7783110"
/translation="MDKIYIHDMEFYGYHGVFPEENKLGQRFKVDLTVELDLKRAGES
DDLEHSVNYGELFELCRKVVEDRTYKLVESIAENIATDILKQYESISRCTIKVIKPDP
PIPGHYRAVAVEITRERP"
misc_feature 78213..78566
/gene="folB"
/locus_tag="BAMEG_0085"
/note="Dihydroneopterin aldolase (DHNA) and
7,8-dihydroneopterin triphosphate epimerase domain
(DHNTPE); these enzymes have been designated folB and
folX, respectively. Folate derivatives are essential
cofactors in the biosynthesis of purines, pyrimidines,
and...; Region: DHNA_DHNTPE; cd00534"
/db_xref="CDD:29762"
misc_feature order(78216..78248,78264..78290,78513..78518,78531..78557)
/gene="folB"
/locus_tag="BAMEG_0085"
/note="homooctamer interface [polypeptide binding]; other
site"
/db_xref="CDD:29762"
misc_feature order(78258..78266,78273..78275,78420..78431,78507..78509,
78549..78551)
/gene="folB"
/locus_tag="BAMEG_0085"
/note="active site"
/db_xref="CDD:29762"
gene 78572..79087
/gene="folK"
/locus_tag="BAMEG_0086"
/db_xref="GeneID:7786060"
CDS 78572..79087
/gene="folK"
/locus_tag="BAMEG_0086"
/EC_number="2.7.6.3"
/note="identified by match to protein family HMM PF01288;
match to protein family HMM TIGR01498"
/codon_start=1
/transl_table=11
/product="2-amino-4-hydroxy-6-
hydroxymethyldihydropteridine pyrophosphokinase"
/protein_id="YP_002812757.1"
/db_xref="GI:227812748"
/db_xref="GeneID:7786060"
/translation="MNNIAYIALGSNIGERYTYLTEAIQFLNKNPYIKVEDVSSVYET
EPVGYTDQSCFLNLVIKISTNLSPQELLKVTQKVENDLGRKREIRWGPRTIDLDILLY
NQENIEAENLIVPHPRMFERAFVIVPLLEINQDIKQNISRSQVEEMKRREGVTVWKQK
NGEDAFVLFEN"
misc_feature 78584..78967
/gene="folK"
/locus_tag="BAMEG_0086"
/note="7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
(HPPK). Folate derivatives are essential cofactors in the
biosynthesis of purines, pyrimidines, and amino acids as
well as formyl-tRNA. Mammalian cells are able to utilize
pre-formed folates after...; Region: HPPK; cd00483"
/db_xref="CDD:29601"
misc_feature order(78599..78601,78701..78706,78710..78712,78734..78736,
78740..78742,78785..78787,78797..78799,78806..78808,
78821..78823,78827..78829,78839..78841,78848..78850,
78857..78859,78863..78868,78908..78910,78917..78922,
78935..78937,78941..78943)
/gene="folK"
/locus_tag="BAMEG_0086"
/note="catalytic center binding site [active]"
/db_xref="CDD:29601"
misc_feature order(78785..78787,78797..78799,78806..78808,78821..78823,
78827..78829,78848..78850,78863..78868,78908..78910,
78917..78922,78935..78937)
/gene="folK"
/locus_tag="BAMEG_0086"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29601"
gene 79039..79242
/locus_tag="BAMEG_0087"
/db_xref="GeneID:7785817"
CDS 79039..79242
/locus_tag="BAMEG_0087"
/note="identified by match to protein family HMM PF01381"
/codon_start=1
/transl_table=11
/product="DNA-binding protein"
/protein_id="YP_002812758.1"
/db_xref="GI:227812749"
/db_xref="GeneID:7785817"
/translation="MEAEKWGRRIRAFRKLKGYTQEGFAKELGVSVSVLGEVERGNRS
PSQDFVVEVAKALKVSIDELMPK"
misc_feature 79057..>79236
/locus_tag="BAMEG_0087"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:31586"
misc_feature 79057..79230
/locus_tag="BAMEG_0087"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(79069..79071,79081..79083,79156..79158)
/locus_tag="BAMEG_0087"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(79078..79080,79153..79155)
/locus_tag="BAMEG_0087"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(79099..79104,79135..79137,79144..79146,79156..79161)
/locus_tag="BAMEG_0087"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene 79266..80264
/locus_tag="BAMEG_0088"
/db_xref="GeneID:7784936"
CDS 79266..80264
/locus_tag="BAMEG_0088"
/note="identified by match to protein family HMM PF01180;
match to protein family HMM PF01207; match to protein
family HMM TIGR00737"
/codon_start=1
/transl_table=11
/product="putative TIM-barrel protein, NifR3 family"
/protein_id="YP_002812759.1"
/db_xref="GI:227812750"
/db_xref="GeneID:7784936"
/translation="MLKIANIEMKNPVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVS
DKAILLNNKRTLDMLYIDEREKPLSLQIFGGEKETLVDAAKYVDQYTTADIIDINMGC
PVPKIVKCDAGAKWLLDPNKIYEMVAAVVDAVEKPVTVKMRIGWDEDHIFAIENAKAV
ERAGGQVVAVHGRTRVQMYEGKADWDIIKQVKQAVNIPVIGNGDVATPQDAKRMLDEI
GVDGVMIGRAALGDPWMIYRTVKYLETGELMPEPTVREKIDVCMLHLDRLIDLKNESV
AVREMRKHAAWYLKGIRGNANVRNGINACNTREDLANVLGVFVEEVEAKQQTIHVG"
misc_feature 79275..80234
/locus_tag="BAMEG_0088"
/note="putative TIM-barrel protein, nifR3 family; Region:
nifR3_yhdG; TIGR00737"
/db_xref="CDD:129820"
misc_feature 79299..79997
/locus_tag="BAMEG_0088"
/note="Dihydrouridine synthase-like (DUS-like) FMN-binding
domain. Members of this family catalyze the reduction of
the 5,6-double bond of a uridine residue on tRNA.
Dihydrouridine modification of tRNA is widely observed in
prokaryotes and eukaryotes, and also...; Region:
DUS_like_FMN; cd02801"
/db_xref="CDD:73368"
misc_feature order(79311..79319,79389..79391,79476..79478,79560..79562,
79686..79688,79776..79778,79869..79871,79875..79877,
79941..79946)
/locus_tag="BAMEG_0088"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73368"
misc_feature order(79476..79478,79569..79574,79686..79688,79692..79694,
79773..79778,79782..79787,79872..79877,79944..79946)
/locus_tag="BAMEG_0088"
/note="active site"
/db_xref="CDD:73368"
misc_feature order(79569..79571,79692..79694,79776..79778,79782..79784)
/locus_tag="BAMEG_0088"
/note="catalytic residues [active]"
/db_xref="CDD:73368"
misc_feature order(79572..79574,79686..79688,79773..79775,79785..79787,
79872..79877)
/locus_tag="BAMEG_0088"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73368"
gene 80424..81923
/gene="lysS"
/locus_tag="BAMEG_0089"
/db_xref="GeneID:7782596"
CDS 80424..81923
/gene="lysS"
/locus_tag="BAMEG_0089"
/EC_number="6.1.1.6"
/note="class II; LysRS2; catalyzes a two-step reaction,
first charging a lysine molecule by linking its carboxyl
group to the alpha-phosphate of ATP, followed by transfer
of the aminoacyl-adenylate to its tRNA; in Methanosarcina
barkeri, LysRS2 charges both tRNA molecules for lysine
that exist in this organism and in addition can charge the
tRNAPyl with lysine in the presence of LysRS1"
/codon_start=1
/transl_table=11
/product="lysyl-tRNA synthetase"
/protein_id="YP_002812760.1"
/db_xref="GI:227812751"
/db_xref="GeneID:7782596"
/translation="MDNMNHEELNDQLLVRREKLHNLREQGIDPFGKRFERTNATNDL
LSLYGEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDE
EYELFKTADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQR
YRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFI
THHNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYE
AYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSGAD
FWNPMSVEEARELAKEHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISP
LAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMM
DDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD"
misc_feature 80442..81917
/gene="lysS"
/locus_tag="BAMEG_0089"
/note="lysyl-tRNA synthetase; Reviewed; Region: lysS;
PRK00484"
/db_xref="CDD:179044"
misc_feature 80607..80927
/gene="lysS"
/locus_tag="BAMEG_0089"
/note="LysRS_N: N-terminal, anticodon recognition domain
of lysyl-tRNA synthetases (LysRS). These enzymes are
homodimeric class 2b aminoacyl-tRNA synthetases (aaRSs).
This domain is a beta-barrel domain (OB fold) involved in
binding the tRNA anticodon stem-loop; Region: LysRS_N;
cd04322"
/db_xref="CDD:58592"
misc_feature order(80622..80627,80676..80681,80766..80768,80844..80846,
80853..80861)
/gene="lysS"
/locus_tag="BAMEG_0089"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:58592"
misc_feature order(80634..80636,80640..80645,80661..80663,80694..80696,
80700..80702,80754..80756,80796..80798,80814..80816)
/gene="lysS"
/locus_tag="BAMEG_0089"
/note="putative anticodon binding site; other site"
/db_xref="CDD:58592"
misc_feature 80940..81908
/gene="lysS"
/locus_tag="BAMEG_0089"
/note="Lys_tRNA synthetase (LysRS) class II core domain.
Class II LysRS is a dimer which attaches a lysine to the
3' OH group of ribose of the appropriate tRNA. Its
assignment to class II aaRS is based upon its structure
and the presence of three...; Region: LysRS_core; cd00775"
/db_xref="CDD:29820"
misc_feature 81030..81044
/gene="lysS"
/locus_tag="BAMEG_0089"
/note="motif 1; other site"
/db_xref="CDD:29820"
misc_feature order(81126..81128,81192..81194,81198..81200,81216..81218,
81228..81230,81645..81647,81666..81668,81675..81677,
81687..81689,81843..81845)
/gene="lysS"
/locus_tag="BAMEG_0089"
/note="active site"
/db_xref="CDD:29820"
misc_feature 81189..81200
/gene="lysS"
/locus_tag="BAMEG_0089"
/note="motif 2; other site"
/db_xref="CDD:29820"
misc_feature 81834..81845
/gene="lysS"
/locus_tag="BAMEG_0089"
/note="motif 3; other site"
/db_xref="CDD:29820"
gene 82322..83830
/gene="rrs_3"
/locus_tag="BAMEG_0090"
/db_xref="GeneID:7781922"
rRNA 82322..83830
/gene="rrs_3"
/locus_tag="BAMEG_0090"
/product="16S ribosomal RNA"
/db_xref="GeneID:7781922"
gene 84009..86916
/gene="rrl_3"
/locus_tag="BAMEG_0092"
/db_xref="GeneID:7785657"
rRNA 84009..86916
/gene="rrl_3"
/locus_tag="BAMEG_0092"
/product="23S ribosomal RNA"
/db_xref="GeneID:7785657"
gene 86966..87081
/gene="rrf_3"
/locus_tag="BAMEG_0093"
/db_xref="GeneID:7785647"
rRNA 86966..87081
/gene="rrf_3"
/locus_tag="BAMEG_0093"
/product="5S ribosomal RNA"
/db_xref="GeneID:7785647"
gene 87288..87749
/gene="ctsR"
/locus_tag="BAMEG_0094"
/db_xref="GeneID:7785637"
CDS 87288..87749
/gene="ctsR"
/locus_tag="BAMEG_0094"
/note="identified by match to protein family HMM PF05848"
/codon_start=1
/transl_table=11
/product="CtsR family transcriptional regulator"
/protein_id="YP_002812761.1"
/db_xref="GI:227812752"
/db_xref="GeneID:7785637"
/translation="MRNISDIIEQYLKQVIDLSNNNVIEIKRNEIADRFECVPSQINY
VINTRFTLERGFVVESKRGGGGYIRIIKVKLHDDIDIIDQMLHMIDHSVAQGNAESMI
IRLIEEGIITNREVKLMLSVLDRSVLSMDVPSRDELRARILCAMLRTLKYK"
misc_feature 87291..87743
/gene="ctsR"
/locus_tag="BAMEG_0094"
/note="Firmicute transcriptional repressor of class III
stress genes (CtsR); Region: CtsR; pfam05848"
/db_xref="CDD:147806"
gene 87923..88471
/locus_tag="BAMEG_0095"
/db_xref="GeneID:7783903"
CDS 87923..88471
/locus_tag="BAMEG_0095"
/note="identified by match to protein family HMM PF02151"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812762.1"
/db_xref="GI:227812753"
/db_xref="GeneID:7783903"
/translation="MTCQNCNIRPATLHYTKVINEKKAEVHLCEQCAEQSGYTSFFQS
SQSNFSFHDLFAGLLHGESTMFEEGKNGFSNTSILRCPDCKMTYEQFTKVGRFGCASC
YDTFKEHLKPLLKRLHGGHTDHCGKIPERIEGNIHLKKELDELKLILKQYVQKEEFEK
AAEVRDKIRNLENQLSEYREGE"
misc_feature 87923..88450
/locus_tag="BAMEG_0095"
/note="Modulator of heat shock repressor CtsR, McsA
[Signal transduction mechanisms]; Region: COG3880"
/db_xref="CDD:33669"
misc_feature <88373..88444
/locus_tag="BAMEG_0095"
/note="UvrB/uvrC motif; Region: UVR; pfam02151"
/db_xref="CDD:145355"
gene 88476..89540
/locus_tag="BAMEG_0096"
/db_xref="GeneID:7784629"
CDS 88476..89540
/locus_tag="BAMEG_0096"
/note="identified by match to protein family HMM PF00217"
/codon_start=1
/transl_table=11
/product="ATP:guanido phosphotransferase"
/protein_id="YP_002812763.1"
/db_xref="GI:227812754"
/db_xref="GeneID:7784629"
/translation="MSLDKIMNEAISPWMKGDGPDSDIVLSSRIRLARNFKKYQFSTM
QNEEETKQIQELFKKEFINKTVEPFGEFELLKMNELTPLQRRVLVEKHLISPNLAGTE
YGACLLSESEHISVMLNEEDHIRIQCLFSGLQLSEALQSANQIDNWIEKEVEYAFDES
LGYITSCPTNVGTGLRASVMIHLPGLVLTKRISRIIQVIQKLGLVVRGIYGEGSEALG
NIFQVSNQMTLGKSEEDIIADLKSVIQQIIQQEKMARELIVQNSSIELEDKVYRSYGI
LANSRLIQSAEAANCLSDLRLGIDLGYIQGISRNILTELMVLTQPGILQQYAGGPLGP
EERDYRRATLIRERLRIEKN"
misc_feature 88485..89519
/locus_tag="BAMEG_0096"
/note="ATP:guanido phosphotransferase; Provisional;
Region: PRK01059"
/db_xref="CDD:179213"
misc_feature 88539..89237
/locus_tag="BAMEG_0096"
/note="Phosphagen (guanidino) kinases found in bacteria;
Region: bacterial_phosphagen_kinase; cd07930"
/db_xref="CDD:153077"
misc_feature order(88554..88556,88560..88562,88566..88568,88749..88751,
88824..88826,88848..88850,89001..89003,89007..89015,
89094..89096,89100..89102,89106..89111,89139..89141)
/locus_tag="BAMEG_0096"
/note="ADP binding site [chemical binding]; other site"
/db_xref="CDD:153077"
misc_feature order(88836..88838,88974..88976,89112..89117)
/locus_tag="BAMEG_0096"
/note="phosphagen binding site; other site"
/db_xref="CDD:153077"
misc_feature order(89085..89129,89133..89150)
/locus_tag="BAMEG_0096"
/note="substrate specificity loop; other site"
/db_xref="CDD:153077"
gene 89563..91998
/locus_tag="BAMEG_0097"
/db_xref="GeneID:7783513"
CDS 89563..91998
/locus_tag="BAMEG_0097"
/note="identified by match to protein family HMM PF00004;
match to protein family HMM PF02151; match to protein
family HMM PF02861; match to protein family HMM PF07724;
match to protein family HMM PF07728"
/codon_start=1
/transl_table=11
/product="negative regulator of genetic competence
ClpC/MecB"
/protein_id="YP_002812764.1"
/db_xref="GI:227812755"
/db_xref="GeneID:7783513"
/translation="MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEG
IAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHYTPRAKKVIELSMDEARKLGHSY
VGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAI
AEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNII
LFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERR
FQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKA
IDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRL
REKLEDTKRQWKEQQGKENSEVTVEDIANVVSTWTRIPVSKLAQTETDKLLNLESILH
DRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGD
EDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAH
PDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRD
YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNRLKEQEI
ELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVE
GESFVIHSAEKVK"
misc_feature 89566..91974
/locus_tag="BAMEG_0097"
/note="Clp protease ATP binding subunit; Region: clpC;
CHL00095"
/db_xref="CDD:177027"
misc_feature 89611..89769
/locus_tag="BAMEG_0097"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:202433"
misc_feature 89839..89991
/locus_tag="BAMEG_0097"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:202433"
misc_feature 90112..90594
/locus_tag="BAMEG_0097"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 90187..90210
/locus_tag="BAMEG_0097"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(90190..90213,90400..90402,90511..90513)
/locus_tag="BAMEG_0097"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 90388..90405
/locus_tag="BAMEG_0097"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 90562..90564
/locus_tag="BAMEG_0097"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 90814..90921
/locus_tag="BAMEG_0097"
/note="UvrB/uvrC motif; Region: UVR; pfam02151"
/db_xref="CDD:145355"
misc_feature 91171..91569
/locus_tag="BAMEG_0097"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 91198..91221
/locus_tag="BAMEG_0097"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(91201..91224,91414..91416,91540..91542)
/locus_tag="BAMEG_0097"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 91402..91419
/locus_tag="BAMEG_0097"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 91705..91974
/locus_tag="BAMEG_0097"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; smart01086"
/db_xref="CDD:198154"
gene 92095..93471
/gene="radA"
/locus_tag="BAMEG_0098"
/db_xref="GeneID:7787212"
CDS 92095..93471
/gene="radA"
/locus_tag="BAMEG_0098"
/note="Sms; stabilizes the strand-invasion intermediate
during the DNA repair; involved in recombination of donor
DNA and plays an important role in DNA damage repair after
exposure to mutagenic agents"
/codon_start=1
/transl_table=11
/product="DNA repair protein RadA"
/protein_id="YP_002812765.1"
/db_xref="GI:227812756"
/db_xref="GeneID:7787212"
/translation="MAKKKTKFTCQECGYQSPKYMGKCPGCGQWNTLVEEMEPVVSSR
RLNYANAIQTEVTKPRRLTEVETKSEARIETKFQEFNRVLGGGIVDGSLVLIGGDPGI
GKSTLLLQISSQLADSSYDVLYISGEESAKQIKLRADRLHVNGSNLFVVSETDLQRIA
THIEEMNPAFVVIDSIQTIHLPEVTSAPGSVAQVRECTAELMKLAKTKGIPIFIVGHV
TKEGAIAGPRMLEHMVDAVLYFEGDRHHTYRILRAVKNRFGSTNEMGIFEMKELGLAE
VLNPSEIFLEERPVGVAGSTVVASMEGTRPVLVEIQALISPTSFGNPRRMATGIDHNR
VSLIMAVLEKRTGLLLQNQDAYLKVAGGLKLDEPAIDLAVALSIASSFRDKSTAPTDA
VIGEVGLTGEIRRVSRIEQRVQEAAKLGFQRAIIPRKNLGGWTIPDGIEVVGVSNLGE
ALRLTLGG"
misc_feature 92095..93468
/gene="radA"
/locus_tag="BAMEG_0098"
/note="DNA repair protein RadA; Provisional; Region:
PRK11823"
/db_xref="CDD:183326"
misc_feature 92116..93237
/gene="radA"
/locus_tag="BAMEG_0098"
/note="Sms (bacterial radA) DNA repair protein. This
protein is not related to archael radA any more than is to
other RecA-like NTPases. Sms has a role in recombination
and recombinational repair and is responsible for the
stabilization or processing of...; Region: Sms; cd01121"
/db_xref="CDD:29987"
misc_feature 92386..92409
/gene="radA"
/locus_tag="BAMEG_0098"
/note="Walker A motif/ATP binding site; other site"
/db_xref="CDD:29987"
misc_feature order(92389..92391,92401..92409,92464..92466,92470..92472,
92614..92619)
/gene="radA"
/locus_tag="BAMEG_0098"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29987"
misc_feature 92605..92616
/gene="radA"
/locus_tag="BAMEG_0098"
/note="Walker B motif; other site"
/db_xref="CDD:29987"
misc_feature <93175..93384
/gene="radA"
/locus_tag="BAMEG_0098"
/note="Subunit ChlI of Mg-chelatase; Region: ChlI;
cl12214"
/db_xref="CDD:209472"
gene 93475..94548
/locus_tag="BAMEG_0099"
/db_xref="GeneID:7783852"
CDS 93475..94548
/locus_tag="BAMEG_0099"
/note="non-specific DNA-binding; scans chromosomes during
sporulation for DNA-damage; delays initiation of
sporulation; participates in a checkpoint signaling
cascade for cell-cycle progression and DNA repair"
/codon_start=1
/transl_table=11
/product="DNA integrity scanning protein DisA"
/protein_id="YP_002812766.1"
/db_xref="GI:227812757"
/db_xref="GeneID:7783852"
/translation="MEENKQRVKSMINILQLVAPGTPLREGIDNVLRAQTGGLIVLGY
NEQIKSIVDGGFHINCAFSPASLYELAKMDGALILNETGSKILIANAQLVPESSIDSI
ETGMRHRTAERVAKQTGSLVVAISQRRNVITLYQGNLRYTLKDIGVILTKANQAIQTL
EKYKAVWNDGITNLGILEFEEVVTMSEVVHVLHSVEMVLRIKNEILSYIHELGTEGRL
IRLQLTELLADLEAEAALLIKDYYQEKTQDHHQILKKLQELANTQLLEDSDLVKLLGY
PGQTSLEESVTPRGYRITSKISRVPPLIIENLINRFKTLQGVCRATINELDDVEGIGE
VRAKKIREGLKRIQEHLYMSRHN"
misc_feature 93499..94542
/locus_tag="BAMEG_0099"
/note="DNA integrity scanning protein DisA; Provisional;
Region: PRK13482"
/db_xref="CDD:184079"
misc_feature 93544..93897
/locus_tag="BAMEG_0099"
/note="DisA bacterial checkpoint controller
nucleotide-binding; Region: DisA_N; pfam02457"
/db_xref="CDD:190315"
misc_feature 93901..94329
/locus_tag="BAMEG_0099"
/note="DisA bacterial checkpoint controller linker region;
Region: DisA-linker; pfam10635"
/db_xref="CDD:151152"
gene 94709..95818
/locus_tag="BAMEG_0100"
/db_xref="GeneID:7784121"
CDS 94709..95818
/locus_tag="BAMEG_0100"
/note="identified by match to protein family HMM PF01850;
match to protein family HMM PF01938"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812767.1"
/db_xref="GI:227812758"
/db_xref="GeneID:7784121"
/translation="MLKRIVQLFFLVIGGALGIYLIPKVINVLDIGAVPLLEGSYVRA
IIGAIILFLTTFWLVDYIVQLIKHIEEALVKAPVADVLFGTLGLISGLIVAYLILIPI
REFTIPVISTVLQVFFTLLLGYLGFQVGFKKRNELLGLFTLPQRGKKKNNNSENEEPE
NEVEESLAHWKILDTSVIIDGRIADICQTKFLEGTIVIPQFVLEELQHIADSSDALKR
NRGRRGLDILNRIQKEMPIPVEIYEGDFDDIQEVDSKLVKLAKITGGTVVTNDFNLNK
VSELQGVTVLNINDLANAIKPVVLPGEELSVYVVKDGKEQNQGVAYLDDGTMIVVEDG
REYVGSQLDVLVTSVLQTSAGRMIFAKRKLLEKAL"
misc_feature 94709..95800
/locus_tag="BAMEG_0100"
/note="Integral membrane protein (PIN domain superfamily)
[General function prediction only]; Region: COG4956"
/db_xref="CDD:34564"
misc_feature 95219..95599
/locus_tag="BAMEG_0100"
/note="PIN domain of Thermus Thermophilus Hb8,
uncharacterized Bacillus subtilis YacL, and other
bacterial homologs; Region: PIN_YacL; cd09877"
/db_xref="CDD:189047"
misc_feature order(95228..95230,95321..95323,95465..95467,95519..95521)
/locus_tag="BAMEG_0100"
/note="putative active site [active]"
/db_xref="CDD:189047"
gene 95835..96515
/gene="ispD"
/locus_tag="BAMEG_0101"
/db_xref="GeneID:7783154"
CDS 95835..96515
/gene="ispD"
/locus_tag="BAMEG_0101"
/EC_number="2.7.7.60"
/note="4-diphosphocytidyl-2C-methyl-D-erythritol synthase;
MEP cytidylyltransferase; MCT; catalyzes the formation of
4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and
2-C-methyl-D-erythritol 4-phosphate; involved in
isoprenoid and isopentenyl-PP biosynthesis; forms
homodimers"
/codon_start=1
/transl_table=11
/product="2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase"
/protein_id="YP_002812768.1"
/db_xref="GI:227812759"
/db_xref="GeneID:7783154"
/translation="MYTLIIPAAGQGKRMGAGKNKLFLLINEVPIIVHTLRAFEKDKA
CKNIIMAINEEERPYFEELMQKYPVEKPVQFIQGGAERQDSVYNAIQHTTDVEYVLVH
DGARPFVTNKVIQDVLTAAEKYGASICAVPVKDTVKKVEQGVVVETVERSQLKAVQTP
QGFSVSLLLEAHRSAKQSCFLGTDDASLVERIGKQVGVVEGSYYNIKVTTPEDLLIAE
SFLHVQKK"
misc_feature 95838..96485
/gene="ispD"
/locus_tag="BAMEG_0101"
/note="CDP-ME synthetase is involved in
mevalonate-independent isoprenoid production; Region:
CDP-ME_synthetase; cd02516"
/db_xref="CDD:133009"
misc_feature order(95853..95855,95859..95876,95895..95897,96069..96080,
96087..96089,96141..96149,96453..96455)
/gene="ispD"
/locus_tag="BAMEG_0101"
/note="substrate binding site; other site"
/db_xref="CDD:133009"
misc_feature order(96150..96152,96207..96209,96231..96233,96237..96239,
96288..96305,96381..96386,96390..96395,96402..96404,
96417..96428,96438..96443)
/gene="ispD"
/locus_tag="BAMEG_0101"
/note="dimer interface; other site"
/db_xref="CDD:133009"
gene 96630..97106
/gene="ispF"
/locus_tag="BAMEG_0102"
/db_xref="GeneID:7784974"
CDS 96630..97106
/gene="ispF"
/locus_tag="BAMEG_0102"
/EC_number="4.6.1.12"
/note="catalyzes the conversion of
4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate
into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate"
/codon_start=1
/transl_table=11
/product="2-C-methyl-D-erythritol 2,4-cyclo diphosphate
synthase"
/protein_id="YP_002812769.1"
/db_xref="GI:227812760"
/db_xref="GeneID:7784974"
/translation="MFRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHT
IADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQ
KPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK"
misc_feature 96636..97094
/gene="ispF"
/locus_tag="BAMEG_0102"
/note="MECDP_synthase
(2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase),
encoded by the ispF gene, catalyzes the formation of
2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEC) in the
non-mevalonate deoxyxylulose (DOXP) pathway for isoprenoid
biosynthesis; Region: MECDP_synthase; cd00554"
/db_xref="CDD:100025"
misc_feature order(96636..96641,96645..96647,96651..96653,96657..96665,
96675..96677,96780..96782,96786..96791,96795..96800,
96909..96911,96915..96917,96921..96923,96942..96944,
96948..96950,97014..97016,97020..97025,97032..97040,
97077..97079,97083..97085,97089..97091)
/gene="ispF"
/locus_tag="BAMEG_0102"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100025"
misc_feature order(96654..96656,96660..96662,96756..96758)
/gene="ispF"
/locus_tag="BAMEG_0102"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:100025"
misc_feature order(96798..96800,96804..96806,96930..96935,96939..96950,
97023..97031)
/gene="ispF"
/locus_tag="BAMEG_0102"
/note="CDP-binding sites; other site"
/db_xref="CDD:100025"
gene 97178..98653
/gene="gltX"
/locus_tag="BAMEG_0103"
/db_xref="GeneID:7785291"
CDS 97178..98653
/gene="gltX"
/locus_tag="BAMEG_0103"
/EC_number="6.1.1.17"
/note="Charges one glutamine molecule and pairs it to its
corresponding RNA trinucleotide during protein
translation"
/codon_start=1
/transl_table=11
/product="glutamyl-tRNA synthetase"
/protein_id="YP_002812770.1"
/db_xref="GI:227812761"
/db_xref="GeneID:7785291"
/translation="MEGVPIMEKQVRVRYAPSPTGHLHIGNARTALFNYLFARHQDGK
FIIRIEDTDVKRNVAGGEESQLKYLKWLGMDWDEGVDVGGEFGPYRQTERLDIYKKLY
EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEAQVKEFEAEGRIPS
IRFRVPADRDYTFKDIVKDEVAFHSNDFGDFVIVKKDGIPTYNFAVAVDDHLMEITHV
LRGDDHISNTPKQMMIYEAFGWDIPQFGHMTLIVNESRKKLSKRDESIIQFIEQYKEL
GYLPEAIFNFIALLGWSPVGEEEIFSQEEFIKMFDAARLSKSPALFDSQKLKWMNNQY
MKKQDLDTVVELSLPHLVKAGRIGETLSEQEQAWIRDVIALYHEQMSFGAEIVELSEM
FFKDHVDYEEEGQEVLKGEQVPEVLRAFAGQVEALEAMEPAAIKAAIKAVQKETGHKG
KNLFMPIRVATTGQTHGPELPNAIALLGKEKVLNRLQKVIG"
misc_feature 97196..98647
/gene="gltX"
/locus_tag="BAMEG_0103"
/note="glutamyl-tRNA synthetase; Reviewed; Region: gltX;
PRK01406"
/db_xref="CDD:179296"
misc_feature 97208..>97525
/gene="gltX"
/locus_tag="BAMEG_0103"
/note="catalytic core domain of discriminating
glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
/db_xref="CDD:173905"
misc_feature order(97217..97219,97223..97231,97253..97258,97262..97267,
97325..97327,97520..97522)
/gene="gltX"
/locus_tag="BAMEG_0103"
/note="active site"
/db_xref="CDD:173905"
misc_feature 97247..97258
/gene="gltX"
/locus_tag="BAMEG_0103"
/note="HIGH motif; other site"
/db_xref="CDD:173905"
misc_feature <97760..98188
/gene="gltX"
/locus_tag="BAMEG_0103"
/note="catalytic core domain of discriminating
glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
/db_xref="CDD:173905"
misc_feature order(97781..97783,97793..97795,97835..97840,97844..97849,
97922..97927,97949..97954)
/gene="gltX"
/locus_tag="BAMEG_0103"
/note="active site"
/db_xref="CDD:173905"
misc_feature 97949..97963
/gene="gltX"
/locus_tag="BAMEG_0103"
/note="KMSKS motif; other site"
/db_xref="CDD:173905"
gene 99086..99751
/gene="cysE"
/locus_tag="BAMEG_0104"
/db_xref="GeneID:7783186"
CDS 99086..99751
/gene="cysE"
/locus_tag="BAMEG_0104"
/EC_number="2.3.1.30"
/note="identified by match to protein family HMM PF00132;
match to protein family HMM TIGR01172"
/codon_start=1
/transl_table=11
/product="serine O-acetyltransferase"
/protein_id="YP_002812771.1"
/db_xref="GI:227812762"
/db_xref="GeneID:7783186"
/translation="MFKRLREDIEVVFEQDPAARSYFEVILTYSGLHAVWAHRIAHAF
YKKNFFFIARWISQVSRFFTGIEIHPGATIGRRFFIDHGMGVVIGETCEIGDNVTIYQ
GVTLGGTGKEKGKRHPTIQDNVLIATGAKVLGSITVGENSKIGAGSVVLKEVPAHSTV
VGIPGRVVIQNGVKIGQELNHSDLPDPIFDKLKVMEVELDKLKKQLEVKVERKDKNDY
SHL"
misc_feature 99098..99583
/gene="cysE"
/locus_tag="BAMEG_0104"
/note="serine O-acetyltransferase; Region: cysE;
TIGR01172"
/db_xref="CDD:200082"
misc_feature <99101..99190
/gene="cysE"
/locus_tag="BAMEG_0104"
/note="Serine acetyltransferase, N-terminal; Region:
SATase_N; cl05762"
/db_xref="CDD:198859"
misc_feature 99275..99577
/gene="cysE"
/locus_tag="BAMEG_0104"
/note="Serine acetyltransferase (SAT): SAT catalyzes the
CoA-dependent acetylation of the side chain hydroxyl group
of L-serine to form O-acetylserine, as the first step of a
two-step biosynthetic pathway in bacteria and plants
leading to the formation of...; Region: LbH_SAT; cd03354"
/db_xref="CDD:100045"
misc_feature order(99278..99280,99284..99286,99329..99331,99431..99433,
99521..99523,99530..99532,99536..99538)
/gene="cysE"
/locus_tag="BAMEG_0104"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:100045"
misc_feature order(99326..99331,99386..99391,99407..99412,99431..99436,
99467..99469,99512..99514,99518..99523,99530..99532,
99536..99538,99560..99562,99575..99577)
/gene="cysE"
/locus_tag="BAMEG_0104"
/note="active site"
/db_xref="CDD:100045"
misc_feature order(99326..99331,99407..99409,99431..99436)
/gene="cysE"
/locus_tag="BAMEG_0104"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100045"
misc_feature order(99386..99391,99407..99412,99467..99469,99512..99514,
99518..99523,99530..99532,99536..99538,99560..99562,
99575..99577)
/gene="cysE"
/locus_tag="BAMEG_0104"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:100045"
gene 99732..101129
/gene="cysS"
/locus_tag="BAMEG_0105"
/db_xref="GeneID:7786387"
CDS 99732..101129
/gene="cysS"
/locus_tag="BAMEG_0105"
/EC_number="6.1.1.16"
/note="catalyzes a two-step reaction; charges a cysteine
by linking its carboxyl group to the alpha-phosphate of
ATP then transfers the aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="cysteinyl-tRNA synthetase"
/protein_id="YP_002812772.1"
/db_xref="GI:227812763"
/db_xref="GeneID:7786387"
/translation="MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARP
PMVFDTVRRYLEYKGYDVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVT
ALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPI
ADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLG
DTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFIL
VHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESST
DLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVI
EAYVKQLETLFDILGLELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRN
IILEDTAQGTRWKRG"
misc_feature 99732..101126
/gene="cysS"
/locus_tag="BAMEG_0105"
/note="cysteinyl-tRNA synthetase; Validated; Region: cysS;
PRK00260"
/db_xref="CDD:178951"
misc_feature 99741..>100076
/gene="cysS"
/locus_tag="BAMEG_0105"
/note="catalytic core domain of cysteinyl tRNA synthetase;
Region: CysRS_core; cd00672"
/db_xref="CDD:173899"
misc_feature order(99816..99827,99843..99845,99849..99854,99861..99866,
99930..99932,99936..99938)
/gene="cysS"
/locus_tag="BAMEG_0105"
/note="active site"
/db_xref="CDD:173899"
misc_feature 99843..99854
/gene="cysS"
/locus_tag="BAMEG_0105"
/note="HIGH motif; other site"
/db_xref="CDD:173899"
misc_feature <100344..100646
/gene="cysS"
/locus_tag="BAMEG_0105"
/note="catalytic core domain of cysteinyl tRNA synthetase;
Region: CysRS_core; cd00672"
/db_xref="CDD:173899"
misc_feature 100527..100541
/gene="cysS"
/locus_tag="BAMEG_0105"
/note="KMSKS motif; other site"
/db_xref="CDD:173899"
misc_feature 100647..101123
/gene="cysS"
/locus_tag="BAMEG_0105"
/note="Anticodon-binding domain of class Ia aminoacyl tRNA
synthetases and similar domains; Region:
Anticodon_Ia_like; cl12020"
/db_xref="CDD:212339"
misc_feature order(100650..100652,100662..100664,100671..100673,
100680..100682,100692..100697,100701..100706,
100836..100838,100857..100859,100866..100868,
100875..100877)
/gene="cysS"
/locus_tag="BAMEG_0105"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153408"
misc_feature order(100680..100682,100689..100694,100701..100706,
100875..100877)
/gene="cysS"
/locus_tag="BAMEG_0105"
/note="anticodon binding site; other site"
/db_xref="CDD:153408"
gene 101132..101539
/locus_tag="BAMEG_0106"
/db_xref="GeneID:7786178"
CDS 101132..101539
/locus_tag="BAMEG_0106"
/note="identified by match to protein family HMM PF00636"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812773.1"
/db_xref="GI:227812764"
/db_xref="GeneID:7786178"
/translation="MIDAKQLNSLALAYMGDAVYEQYIRYHLLQKGKVRPNQLHRLGT
SFVSAKAQAKVVYHLLETAFLTEEEEAVLRRGRNANSGTVPKNTDVQTYRHSTAFEAL
IGYHHLLNNRERLDEIVYKAIAVLEEKEGGTSS"
misc_feature 101132..101515
/locus_tag="BAMEG_0106"
/note="Ribonuclease III family protein [Replication,
recombination, and repair]; Region: COG1939"
/db_xref="CDD:32122"
misc_feature order(101168..101170,101180..101182,101420..101422,
101429..101431)
/locus_tag="BAMEG_0106"
/note="active site"
/db_xref="CDD:29697"
misc_feature order(101168..101170,101420..101422,101429..101431)
/locus_tag="BAMEG_0106"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:29697"
misc_feature order(101171..101176,101183..101185,101192..101197,
101204..101209,101213..101221,101246..101248,
101450..101452,101477..101479)
/locus_tag="BAMEG_0106"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29697"
gene 101536..102279
/locus_tag="BAMEG_0107"
/db_xref="GeneID:7785090"
CDS 101536..102279
/locus_tag="BAMEG_0107"
/note="identified by match to protein family HMM PF00588;
match to protein family HMM PF08032; match to protein
family HMM TIGR00186"
/codon_start=1
/transl_table=11
/product="TrmH family RNA methyltransferase"
/protein_id="YP_002812774.1"
/db_xref="GI:227812765"
/db_xref="GeneID:7785090"
/translation="MSSEYIIGRNPVIEALRSGRDINKIWIAEGAAKGQVQIVLALAK
ENKIILQHAPKKKLDQLVEGNHQGVIAQVAAYQYAELEDLFKVAEKRNEDPFFLILDE
IEDPHNLGSIMRTADATGAHGIIIPKRRAVGLTASVAKASTGAIEYIPVARVTNLSRT
IDELKERGLWIAGTDAKGKTDYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLITLPM
VGKVTSLNASVAASLLMYEVYRKRNEIGK"
misc_feature 101542..102261
/locus_tag="BAMEG_0107"
/note="rRNA methylase, putative, group 3; Region:
rRNA_methyl_3; TIGR00186"
/db_xref="CDD:129290"
misc_feature 101548..101766
/locus_tag="BAMEG_0107"
/note="RNA 2'-O ribose methyltransferase substrate
binding; Region: SpoU_sub_bind; pfam08032"
/db_xref="CDD:203842"
misc_feature 101818..102243
/locus_tag="BAMEG_0107"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
pfam00588"
/db_xref="CDD:201328"
gene 102283..102795
/locus_tag="BAMEG_0108"
/db_xref="GeneID:7787078"
CDS 102283..102795
/locus_tag="BAMEG_0108"
/note="identified by match to protein family HMM PF05991"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812775.1"
/db_xref="GI:227812766"
/db_xref="GeneID:7787078"
/translation="MNDILIVDGYNIIGAWGDLKKLRDVDLQSSRDALIDKMADYQGY
TGTKVMIVFDAYTVHGIEKKMKQSRVEVIFTRKNQTADEKIEQLAIELRNINTQIYVA
TSDYTEQWVIFAQGALRKSARELELEVQAMEQQVRRRTQDTKEKQPAMRKIFSKDITE
KLEKLRRGER"
misc_feature 102295..102783
/locus_tag="BAMEG_0108"
/note="YacP-like NYN domain; Region: NYN_YacP; pfam05991"
/db_xref="CDD:203367"
gene 102863..103519
/gene="sigH"
/locus_tag="BAMEG_0109"
/db_xref="GeneID:7785516"
CDS 102863..103519
/gene="sigH"
/locus_tag="BAMEG_0109"
/note="DNA-dependent RNA polymerase catalyzes the
transcription of DNA into RNA using the four
ribonucleoside triphosphates as substrates"
/codon_start=1
/transl_table=11
/product="RNA polymerase factor sigma-70"
/protein_id="YP_002812776.1"
/db_xref="GI:227812767"
/db_xref="GeneID:7785516"
/translation="MEAGFVSVGDVTFRDLEDEAIVELVRKGNTDALEYLIHKYKNFV
RAKSRSYFLVGADREDIVQEGMIGLFKAIRDYKEDKLSSFKAFAELCITRQIITAIKT
ATRQKHIPLNSYVSLDKPIYDEESDRTLLDVISEAKVTDPEEMIISQEEYTDIESKIS
ELLSDLERKVLSLYLDGRSYQEISEQLNRHVKSIDNALQRVKRKLERYMEMRESTTSN
"
misc_feature 102899..103507
/gene="sigH"
/locus_tag="BAMEG_0109"
/note="RNA polymerase factor sigma-70; Validated; Region:
PRK08295"
/db_xref="CDD:181361"
misc_feature 102968..103180
/gene="sigH"
/locus_tag="BAMEG_0109"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature 103343..103477
/gene="sigH"
/locus_tag="BAMEG_0109"
/note="Sigma-70, region 4; Region: Sigma70_r4_2;
pfam08281"
/db_xref="CDD:203898"
gene 103830..104009
/gene="secE"
/locus_tag="BAMEG_0110"
/db_xref="GeneID:7787498"
CDS 103830..104009
/gene="secE"
/locus_tag="BAMEG_0110"
/note="forms a complex with SecY and SecG; SecYEG forms a
putative protein-conducting channel to which secA binds
and translocates targeted polypeptides across the
cytoplasmic membrane, a process driven by ATP and a
proton-motive force"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecE"
/protein_id="YP_002812777.1"
/db_xref="GI:227812768"
/db_xref="GeneID:7787498"
/translation="MRLTNFFGDVGREMKKVSWPKKDELLRSTATVIATVVFFAIFFA
VVDMGISSLIRLILG"
misc_feature 103830..104000
/gene="secE"
/locus_tag="BAMEG_0110"
/note="preprotein translocase subunit SecE; Reviewed;
Region: secE; PRK07597"
/db_xref="CDD:181055"
gene 104141..104674
/gene="nusG"
/locus_tag="BAMEG_0111"
/db_xref="GeneID:7783783"
CDS 104141..104674
/gene="nusG"
/locus_tag="BAMEG_0111"
/note="Modulates Rho-dependent transcription termination"
/codon_start=1
/transl_table=11
/product="transcription antitermination protein NusG"
/protein_id="YP_002812778.1"
/db_xref="GI:227812769"
/db_xref="GeneID:7783783"
/translation="MEKSWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEV
EVEMKNGKEKLMKRKVFPGYVLVELIMTDDSWYVVRNTPGVTGFVGSSGSGSKPSPLL
EEEVVTIMKHMGMDNEVVDFDFELHETVRVNEGPFADYTGAIEEIDVEKKKVSVLVDM
FGRETPVELDFHQIEKL"
misc_feature 104141..104671
/gene="nusG"
/locus_tag="BAMEG_0111"
/note="transcription antitermination protein NusG;
Validated; Region: nusG; PRK05609"
/db_xref="CDD:180161"
misc_feature 104153..>104383
/gene="nusG"
/locus_tag="BAMEG_0111"
/note="Bacterial N-Utilization Substance G (NusG)
N-terminal (NGN) domain, subgroup 1; Region: NGN_Bact_1;
cd09891"
/db_xref="CDD:193580"
misc_feature order(104159..104161,104261..104263,104321..104323,
104330..104332,104336..104338)
/gene="nusG"
/locus_tag="BAMEG_0111"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:193580"
gene 104842..105267
/gene="rplK"
/locus_tag="BAMEG_0112"
/db_xref="GeneID:7783560"
CDS 104842..105267
/gene="rplK"
/locus_tag="BAMEG_0112"
/note="binds directly to 23S ribosomal RNA"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L11"
/protein_id="YP_002812779.1"
/db_xref="GI:227812770"
/db_xref="GeneID:7783560"
/translation="MAKKVIKMVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNA
RTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKR
DKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIED"
misc_feature 104842..105264
/gene="rplK"
/locus_tag="BAMEG_0112"
/note="50S ribosomal protein L11; Validated; Region: rplK;
PRK00140"
/db_xref="CDD:178895"
misc_feature 104866..105258
/gene="rplK"
/locus_tag="BAMEG_0112"
/note="Ribosomal protein L11. Ribosomal protein L11,
together with proteins L10 and L7/L12, and 23S rRNA, form
the L7/L12 stalk on the surface of the large subunit of
the ribosome. The homologous eukaryotic cytoplasmic
protein is also called 60S ribosomal...; Region:
Ribosomal_L11; cd00349"
/db_xref="CDD:100101"
misc_feature order(104869..104871,104929..104931,105061..105069,
105079..105081,105100..105102,105175..105177,
105190..105198,105208..105210,105217..105222,
105229..105234,105238..105246)
/gene="rplK"
/locus_tag="BAMEG_0112"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:100101"
misc_feature order(104869..104871,105010..105012,105016..105027,
105037..105039,105043..105048,105178..105183,
105190..105195)
/gene="rplK"
/locus_tag="BAMEG_0112"
/note="L7/L12 interface [polypeptide binding]; other site"
/db_xref="CDD:100101"
misc_feature order(104917..104919,104929..104931)
/gene="rplK"
/locus_tag="BAMEG_0112"
/note="putative thiostrepton binding site; other site"
/db_xref="CDD:100101"
misc_feature order(105118..105120,105127..105129)
/gene="rplK"
/locus_tag="BAMEG_0112"
/note="L25 interface [polypeptide binding]; other site"
/db_xref="CDD:100101"
gene 105445..106137
/gene="rplA"
/locus_tag="BAMEG_0113"
/db_xref="GeneID:7783319"
CDS 105445..106137
/gene="rplA"
/locus_tag="BAMEG_0113"
/note="in Escherichia coli and Methanococcus, this protein
autoregulates expression; the binding site in the mRNA
mimics the binding site in the 23S rRNA"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L1"
/protein_id="YP_002812780.1"
/db_xref="GI:227812771"
/db_xref="GeneID:7783319"
/translation="MAKRGKKYVEAAKLVDRAAAYSATEAVELVKKTNTAKFDATVEA
AFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDADYIG
KIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGK
VEYRVDKAGNIHVPIGKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTM
GPGVRVDVSTLA"
misc_feature 105517..106116
/gene="rplA"
/locus_tag="BAMEG_0113"
/note="Ribosomal protein L1. The L1 protein, located near
the E-site of the ribosome, forms part of the L1 stalk
along with 23S rRNA. In bacteria and archaea, L1
functions both as a ribosomal protein that binds rRNA, and
as a translation repressor that binds...; Region:
Ribosomal_L1; cd00403"
/db_xref="CDD:88601"
misc_feature order(105550..105558,105565..105567,105571..105573,
105577..105579,105583..105585,105946..105948,
105952..105954,105958..105960,106096..106101,
106105..106107)
/gene="rplA"
/locus_tag="BAMEG_0113"
/note="mRNA/rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88601"
misc_feature 106187..106330
/note="Ribosomal protein L10 leader"
gene 106370..106870
/gene="rplJ"
/locus_tag="BAMEG_0115"
/db_xref="GeneID:7786862"
CDS 106370..106870
/gene="rplJ"
/locus_tag="BAMEG_0115"
/note="binds the two ribosomal protein L7/L12 dimers and
anchors them to the large ribosomal subunit"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L10"
/protein_id="YP_002812781.1"
/db_xref="GI:227812772"
/db_xref="GeneID:7786862"
/translation="MSKVIETKQQVVTEIADKLRASKSTIVVDYRGLTVSEATELRKQ
LREAGVEFKVYKNSLTRRAAESAEMAELNEFLTGPNAIAFSNEDVVAPAKVLNDFAKD
HEALEIKAGVIEGKLVTLDEVKAIATLPSREGLLSMLLSVLQAPIRNLALATKAVADQ
KEEQGA"
misc_feature 106382..106849
/gene="rplJ"
/locus_tag="BAMEG_0115"
/note="Ribosomal protein L10 family, L10 subfamily;
composed of bacterial 50S ribosomal protein and eukaryotic
mitochondrial 39S ribosomal protein, L10. L10 occupies the
L7/L12 stalk of the ribosome. The N-terminal domain (NTD)
of L10 interacts with L11 protein...; Region:
Ribosomal_L10; cd05797"
/db_xref="CDD:88597"
misc_feature order(106391..106396,106403..106405,106535..106546,
106553..106555)
/gene="rplJ"
/locus_tag="BAMEG_0115"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88597"
misc_feature order(106637..106639,106706..106708,106715..106717,
106763..106765,106772..106777,106784..106789,
106793..106810,106814..106822,106829..106834,
106838..106843,106847..106849)
/gene="rplJ"
/locus_tag="BAMEG_0115"
/note="Interface with L7/L12 ribosomal proteins
[polypeptide binding]; other site"
/db_xref="CDD:88597"
gene 106938..107297
/gene="rplL"
/locus_tag="BAMEG_0116"
/db_xref="GeneID:7783310"
CDS 106938..107297
/gene="rplL"
/locus_tag="BAMEG_0116"
/note="present in two forms; L12 is normal, while L7 is
aminoacylated at the N-terminal serine; the only multicopy
ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two
L12 dimers bind L10; critically important for translation
efficiency and fidelity; stimulates GTPase activity of
translation factors"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L7/L12"
/protein_id="YP_002812782.1"
/db_xref="GI:227812773"
/db_xref="GeneID:7783310"
/translation="MTKEQIIEAVKSMTVLELNDLVKAIEEEFGVTAAAPVAVAGGAG
EAAAEKTEFDVELTSAGAQKIKVIKVVREITGLGLKEAKELVDNTPKVIKEAAAKEEA
EEIKAKLEEVGAAVEVK"
misc_feature 106938..>107207
/gene="rplL"
/locus_tag="BAMEG_0116"
/note="Ribosomal protein L7/L12. Ribosomal protein L7/L12
refers to the large ribosomal subunit proteins L7 and L12,
which are identical except that L7 is acetylated at the N
terminus. It is a component of the L7/L12 stalk, which is
located at the surface of...; Region: Ribosomal_L7_L12;
cd00387"
/db_xref="CDD:100102"
misc_feature order(106938..106940,106977..106985,106992..106997,
107004..107006,107013..107015,107058..107060,
107067..107072,107076..107081,107088..107093,
107154..107156,107160..107165,107169..107171,
107175..107180)
/gene="rplL"
/locus_tag="BAMEG_0116"
/note="core dimer interface [polypeptide binding]; other
site"
/db_xref="CDD:100102"
misc_feature order(106947..106949,106956..106958,106968..106970,
107007..107009,107022..107024)
/gene="rplL"
/locus_tag="BAMEG_0116"
/note="peripheral dimer interface [polypeptide binding];
other site"
/db_xref="CDD:100102"
misc_feature order(106989..106991,106998..107003,107013..107015,
107022..107024)
/gene="rplL"
/locus_tag="BAMEG_0116"
/note="L10 interface [polypeptide binding]; other site"
/db_xref="CDD:100102"
misc_feature order(107127..107132,107139..107144,107151..107153,
107172..107177,107184..107186)
/gene="rplL"
/locus_tag="BAMEG_0116"
/note="L11 interface [polypeptide binding]; other site"
/db_xref="CDD:100102"
misc_feature order(107130..107132,107142..107144,107151..107153,
107172..107177,107184..107186)
/gene="rplL"
/locus_tag="BAMEG_0116"
/note="putative EF-Tu interaction site [polypeptide
binding]; other site"
/db_xref="CDD:100102"
misc_feature order(107130..107132,107139..107144,107151..107153)
/gene="rplL"
/locus_tag="BAMEG_0116"
/note="putative EF-G interaction site [polypeptide
binding]; other site"
/db_xref="CDD:100102"
gene 107372..107971
/locus_tag="BAMEG_0117"
/db_xref="GeneID:7784269"
CDS 107372..107971
/locus_tag="BAMEG_0117"
/note="identified by match to protein family HMM PF05175;
match to protein family HMM PF08242"
/codon_start=1
/transl_table=11
/product="ybxB protein"
/protein_id="YP_002812783.1"
/db_xref="GI:227812774"
/db_xref="GeneID:7784269"
/translation="MADHYFSNDPSSKSDRKRWEFTLRGSRFTFLSDRGVFSKNEVDF
GSRLLIEAFQVPDIKGDILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENA
ANNRIGNVHIFQSSVYENVDGMYAAILSNPPIRAGKDIVHEILEKAVEHLVPGGELWI
VIQKKQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKKR"
misc_feature <107372..107887
/locus_tag="BAMEG_0117"
/note="16S RNA G1207 methylase RsmC [Translation,
ribosomal structure and biogenesis]; Region: RsmC;
COG2813"
/db_xref="CDD:32642"
misc_feature 107552..107857
/locus_tag="BAMEG_0117"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(107564..107584,107636..107641,107714..107722,
107762..107764)
/locus_tag="BAMEG_0117"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 108264..111797
/gene="rpoB"
/locus_tag="BAMEG_0118"
/db_xref="GeneID:7787095"
CDS 108264..111797
/gene="rpoB"
/locus_tag="BAMEG_0118"
/EC_number="2.7.7.6"
/note="DNA-dependent RNA polymerase catalyzes the
transcription of DNA into RNA using the four
ribonucleoside triphosphates as substrates; beta subunit
is part of the catalytic core which binds with a sigma
factor to produce the holoenzyme"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit beta"
/protein_id="YP_002812784.1"
/db_xref="GI:227812775"
/db_xref="GeneID:7787095"
/translation="MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEG
LREMFQDISPIEDFTGNLSLEFIDYSLGEPKYSVDECKERDVTYAAPLRVKVRLINKE
TGEVKEQDVFMGDFPLMTETGTFVINGAERVIVSQLVRSPSVYYSGKVDKNGKRGFTA
TVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALGFGSDQEITELLGDNEYLS
NTLEKDNTDSTEKALLEIYERLRPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKIN
KKLHIKNRLFNQRLAETLVDPETGEILAAEGTILDRRTLDRILPYLEKNIGFKTAKPM
GGVVEGDVELQSIKIYAPESEGERVINVIGNANITRDVKHITPGDILASISYFFNLLY
KVGDTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNAITPQALINI
RPVIAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFEVRDVHYS
HYGRMCPIETPEGPNIGLINSLSSFAKVNEFGFIETPYRRVDPETGLVTGHVDYLTAD
EEDNYVVAQANMKLSEEGEFLDEDIVARFRGENIVTNKERIDYMDVSPKQVVSAATAC
IPFLENDDSNRALMGANMQRQAVPLMNPESPIVGTGMEYVSAKDSGAAVICKHPGIVE
RVEAREVWVRRYVEVDGQTVKGDLDRYKMQKFIRSNQGTCYNQRPIVSVGNEVVKGEI
LADGPSMELGELALGRNVLVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESEA
RDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDLLVGKVTPKGVTELTAE
ERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDELPPGVNQLVRAYIVQ
KRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPIDIMLNPLGVPSRMNIGQVLE
LHLGMAARYLGIHIATPVFDGAREEDVWGTIEEAGMANDAKTILYDGRTGEPFDNRVS
VGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAA
YTLQEILTVKSDDVIGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMDVKMMSS
DDTEIEMRDTEDDDDHQSADKLNVEVETTKE"
misc_feature 108339..111725
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RNA polymerase beta subunit; Provisional; Region:
rpoB; CHL00207"
/db_xref="CDD:177098"
misc_feature 108348..>108830
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cl04593"
/db_xref="CDD:156170"
misc_feature 108681..109133
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RNA polymerase Rpb2, domain 2; Region:
RNA_pol_Rpb2_2; pfam04561"
/db_xref="CDD:203048"
misc_feature <109398..>109922
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cl04593"
/db_xref="CDD:156170"
misc_feature 109899..110102
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RNA polymerase beta subunit external 1 domain;
Region: RNA_pol_Rpb2_45; pfam10385"
/db_xref="CDD:204469"
misc_feature <110073..>110267
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cl04593"
/db_xref="CDD:156170"
misc_feature <110430..111695
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cd00653"
/db_xref="CDD:73223"
misc_feature order(110436..110441,110532..110534,110538..110540,
110601..110603,110610..110612,111081..111083,
111120..111122,111201..111206,111210..111212,
111303..111305,111354..111356)
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RPB10 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(110547..110558,110565..110567,110571..110579,
111054..111056,111060..111062,111066..111068,
111132..111134,111138..111140,111147..111149,
111156..111158,111171..111173,111183..111185,
111234..111236,111315..111317,111339..111347,
111351..111353,111390..111392,111399..111407,
111411..111416,111477..111485,111495..111497,
111501..111506,111510..111512,111516..111533,
111537..111554,111564..111566,111633..111635,
111645..111647,111651..111653,111657..111662,
111666..111668,111672..111683,111687..111689,
111693..111695)
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RPB1 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(110565..110567,110607..110609,111078..111080,
111321..111323)
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RPB11 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(110607..110612,110622..110624,111000..111002,
111006..111008,111081..111089,111096..111098,
111102..111107,111318..111341,111345..111347)
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RPB3 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(110622..110624,110733..110735,110739..110741,
110751..110759,110763..110765)
/gene="rpoB"
/locus_tag="BAMEG_0118"
/note="RPB12 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
gene 111835..115446
/gene="rpoC"
/locus_tag="BAMEG_0119"
/db_xref="GeneID:7782207"
CDS 111835..115446
/gene="rpoC"
/locus_tag="BAMEG_0119"
/EC_number="2.7.7.6"
/note="DNA-dependent RNA polymerase catalyzes the
transcription of DNA into RNA using the four
ribonucleoside triphosphates as substrates. Subunit beta'
binds to sigma factor allowing it to bind to the -10
region of the promoter"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit beta'"
/protein_id="YP_002812785.1"
/db_xref="GI:227812776"
/db_xref="GeneID:7782207"
/translation="MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKD
GLFCERIFGPQKDWECHCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVS
HIWYFKGIPSRMGLVLDMSPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRD
RYGSTFQAAMGAEAIKKLLQDIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLEAFRN
SGNEPSWMILDVLPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGA
PSIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPNLKMYQCGLPKEMALELFKPFVMKELVEKGLAHNIKSAKRKIER
VQPEVWDVLESVIKEHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVCTAYNADF
DGDQMAVHVPLSSEAQAEARLLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLEREG
AIGEGMVFKDANEALLAYQNGYVHLHTRVAVAASAVNNVTFTEEQKNMLLLTTVGKLI
FNEILPESFPYINEPTNSNLEKETPAKYFVEKGANIKEIIASREEVAPFSKKILGNII
AEVFKRFKITETSRMLDRMKNLGFKYSTKAGITVGVSDILVLGEKDEILHEAQAKVDN
VIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSLNKRNPIFMMSDSGARGNASN
FTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFISTHGARKGLADTALKTADSG
YLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLYDRLVGRFARKTVKHPE
TGEVLVAENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCKKCYGRNLATGTDVE
VGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIFEARNPKGQAVIS
EIDGVIAAINDVKDRQEVVVQGEVEARTYAIPYGARLKVIPGQKISHGKELTEGSIDP
KELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVSDAGETDVL
PGTLLDIHQFTDANAKVLLQGKQPATARPVLLGITKASLETDSFLSAASFQETTRVLT
DAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDDMNVENDEVYVEQ"
misc_feature 111841..115380
/gene="rpoC"
/locus_tag="BAMEG_0119"
/note="DNA-directed RNA polymerase subunit beta';
Provisional; Region: PRK00566"
/db_xref="CDD:179068"
misc_feature 111847..112827
/gene="rpoC"
/locus_tag="BAMEG_0119"
/note="RNA polymerase Rpb1, domain 1; Region:
RNA_pol_Rpb1_1; pfam04997"
/db_xref="CDD:147265"
misc_feature 112504..113334
/gene="rpoC"
/locus_tag="BAMEG_0119"
/note="RNA polymerase I subunit A N-terminus; Region:
RPOLA_N; smart00663"
/db_xref="CDD:197824"
misc_feature 113266..113823
/gene="rpoC"
/locus_tag="BAMEG_0119"
/note="RNA polymerase Rpb1, domain 3; Region:
RNA_pol_Rpb1_3; pfam04983"
/db_xref="CDD:147253"
misc_feature 113908..114138
/gene="rpoC"
/locus_tag="BAMEG_0119"
/note="RNA polymerase Rpb1, domain 4; Region:
RNA_pol_Rpb1_4; pfam05000"
/db_xref="CDD:203147"
misc_feature 114571..115362
/gene="rpoC"
/locus_tag="BAMEG_0119"
/note="Largest subunit (beta') of Bacterial DNA-dependent
RNA polymerase (RNAP), C-terminal domain; Region:
RNAP_beta'_C; cd02655"
/db_xref="CDD:132721"
misc_feature order(114574..114579,114583..114585,115354..115356)
/gene="rpoC"
/locus_tag="BAMEG_0119"
/note="Rpb1 (beta') - Rpb6 (omega) interaction site
[polypeptide binding]; other site"
/db_xref="CDD:132721"
misc_feature order(114595..114597,114607..114609,115294..115296,
115312..115314,115330..115332,115339..115344,
115354..115356)
/gene="rpoC"
/locus_tag="BAMEG_0119"
/note="Rpb1 (beta') - Rpb2 (beta) interaction site
[polypeptide binding]; other site"
/db_xref="CDD:132721"
misc_feature 114640..114666
/gene="rpoC"
/locus_tag="BAMEG_0119"
/note="G-loop; other site"
/db_xref="CDD:132721"
misc_feature order(114721..114723,115204..115206,115249..115254)
/gene="rpoC"
/locus_tag="BAMEG_0119"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:132721"
gene 115560..115808
/locus_tag="BAMEG_0120"
/db_xref="GeneID:7782830"
CDS 115560..115808
/locus_tag="BAMEG_0120"
/note="identified by match to protein family HMM PF01248"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812786.1"
/db_xref="GI:227812777"
/db_xref="GeneID:7782830"
/translation="MSYQKVSNAENVVVGHKRTLEAIKNGIVKEVVIAEDADMRLTHV
IIRTALQHNIPITKVESVRKLGKVAGIQVGASAIGIIS"
misc_feature 115560..115805
/locus_tag="BAMEG_0120"
/note="hypothetical protein; Provisional; Region:
PRK06683"
/db_xref="CDD:136002"
gene 115923..116345
/gene="rpsL"
/locus_tag="BAMEG_0121"
/db_xref="GeneID:7785008"
CDS 115923..116345
/gene="rpsL"
/locus_tag="BAMEG_0121"
/note="interacts with and stabilizes bases of the 16S rRNA
that are involved in tRNA selection in the A site and with
the mRNA backbone; located at the interface of the 30S and
50S subunits, it traverses the body of the 30S subunit
contacting proteins on the other side; mutations in the
S12 gene confer streptomycin resistance"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S12"
/protein_id="YP_002812787.1"
/db_xref="GI:227812778"
/db_xref="GeneID:7785008"
/translation="MPTINQLVRNGRTDKVWKSKSPALNKGFNSLKKKSTDISAPQKR
GVCTRVGTMTPKKPNSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKD
LPGVRYHIVRGALDTAGVDKRMQGRSKYGTKKPKAAKK"
misc_feature 115929..116291
/gene="rpsL"
/locus_tag="BAMEG_0121"
/note="S12-like family, 30S ribosomal protein S12
subfamily; S12 is located at the interface of the large
and small ribosomal subunits of prokaryotes, chloroplasts
and mitochondria, where it plays an important role in both
tRNA and ribosomal subunit...; Region: Ribosomal_S12;
cd03368"
/db_xref="CDD:48341"
misc_feature order(115932..115937,115941..115946,115953..115958)
/gene="rpsL"
/locus_tag="BAMEG_0121"
/note="S17 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:48341"
misc_feature 115932..115934
/gene="rpsL"
/locus_tag="BAMEG_0121"
/note="S8 interaction site; other site"
/db_xref="CDD:48341"
misc_feature order(115956..115964,115998..116000,116043..116048,
116052..116054,116097..116102,116106..116114,
116133..116135,116157..116159,116166..116171,
116208..116213,116223..116228,116289..116291)
/gene="rpsL"
/locus_tag="BAMEG_0121"
/note="16S rRNA interaction site [nucleotide binding];
other site"
/db_xref="CDD:48341"
misc_feature order(116088..116093,116223..116225)
/gene="rpsL"
/locus_tag="BAMEG_0121"
/note="streptomycin interaction site [chemical binding];
other site"
/db_xref="CDD:48341"
misc_feature 116091..116096
/gene="rpsL"
/locus_tag="BAMEG_0121"
/note="23S rRNA interaction site [nucleotide binding];
other site"
/db_xref="CDD:48341"
misc_feature order(116094..116111,116169..116195)
/gene="rpsL"
/locus_tag="BAMEG_0121"
/note="aminoacyl-tRNA interaction site (A-site)
[nucleotide binding]; other site"
/db_xref="CDD:48341"
gene 116375..116845
/gene="rpsG"
/locus_tag="BAMEG_0122"
/db_xref="GeneID:7786976"
CDS 116375..116845
/gene="rpsG"
/locus_tag="BAMEG_0122"
/note="binds directly to 16S rRNA where it nucleates
assembly of the head domain of the 30S subunit"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S7"
/protein_id="YP_002812788.1"
/db_xref="GI:227812779"
/db_xref="GeneID:7786976"
/translation="MPRKGPVAKRDVLPDPMYNSKLVTRLINKMMVDGKKGKSQTILY
NAFDIVSERTGKEPMEVFEQALKNIMPVLEVRARRVGGANYQVPVEVRPERRTTLGLR
WLVNYARLRGEKTMEERLANEILDAANNAGASVKKREDTHKMAEANKAFAHYRW"
misc_feature 116375..116842
/gene="rpsG"
/locus_tag="BAMEG_0122"
/note="30S ribosomal protein S7; Validated; Region:
PRK05302"
/db_xref="CDD:180003"
gene 117053..119131
/gene="fusA"
/locus_tag="BAMEG_0123"
/db_xref="GeneID:7783552"
CDS 117053..119131
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="EF-G; promotes GTP-dependent translocation of the
ribosome during translation; many organisms have multiple
copies of this gene"
/codon_start=1
/transl_table=11
/product="elongation factor G"
/protein_id="YP_002812789.1"
/db_xref="GI:227812780"
/db_xref="GeneID:7783552"
/translation="MAREFSLENTRNIGIMAHIDAGKTTATERILYYTGRIHKIGETH
EGASQMDWMEQEQERGITITSAATTAQWKGHRVNIIDTPGHVDFTVEVERSLRVLDGA
VAVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKIGADFLYSVGTIHDRLQANAH
PIQLPIGAEDEFNGIIDLVEECAYMYGNDLGTDIQRVEIPEEHKELAEEYRGKLIEAV
AELDEEMMMKYLEGEEITVEELKAGIRKATTSVEFFPVICGSAFKNKGVQILLDAVID
YLPSPLDVPAIKGIVPDTDEEVERKSSDEEPFAALAFKIMTDPYVGKLTFFRVYSGVL
NSGSYVKNSTKGKRERVGRILQMHANSREEISTVYAGDIAAAVGLKDTTTGDTLCDEK
SLVILESMEFPEPVISVAIEPKSKADQDKMGTALSKLSEEDPTFRAHTDQETGQTIIA
GMGELHLDIIVDRMRREFKVEANVGAPQVAYRETFRAAAKVEGKFARQSGGRGQFGHV
WIEFEPNEEGKGFEFENKIVGGVVPREYIPAVGAGLEDALKNGVLAGYPVADIKAALV
DGSYHDVDSSEMAFKIAASMALKAAVSKCNPVILEPMMKVEVVIPEEYMGDIMGDVTS
RRGRVEGMEARGNAQVVRAMVPLSEMFGYATSLRSNTQGRGTFSMVFDHYEEVPKSVS
EEIIKKNKGE"
misc_feature 117053..119125
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="elongation factor G; Reviewed; Region: PRK00007"
/db_xref="CDD:178789"
misc_feature 117086..117895
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="Elongation factor G (EF-G) family involved in both
the elongation and ribosome recycling phases of protein
synthesis; Region: EF-G; cd01886"
/db_xref="CDD:206673"
misc_feature 117101..117124
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="G1 box; other site"
/db_xref="CDD:206673"
misc_feature order(117104..117106,117110..117112,117122..117127,
117134..117136,117143..117148,117248..117253,
117305..117310,117377..117382,117488..117490,
117500..117502)
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206673"
misc_feature order(117110..117112,117116..117127,117455..117460,
117464..117466,117830..117838)
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206673"
misc_feature 117191..117250
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="Switch I region; other site"
/db_xref="CDD:206673"
misc_feature 117236..117238
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="G2 box; other site"
/db_xref="CDD:206673"
misc_feature 117293..117304
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="G3 box; other site"
/db_xref="CDD:206673"
misc_feature 117299..117355
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="Switch II region; other site"
/db_xref="CDD:206673"
misc_feature 117455..117466
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="G4 box; other site"
/db_xref="CDD:206673"
misc_feature 117830..117838
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="G5 box; other site"
/db_xref="CDD:206673"
misc_feature 117974..118222
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="EFG_mtEFG_II: this subfamily represents the domain
II of elongation factor G (EF-G) in bacteria and, the
C-terminus of mitochondrial Elongation factor G1 (mtEFG1)
and G2 (mtEFG2)_like proteins found in eukaryotes. During
the process of peptide synthesis...; Region: EFG_mtEFG_II;
cd04088"
/db_xref="CDD:58095"
misc_feature 118493..118840
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="EFG_mtEFG1_IV: domains similar to domain IV of the
bacterial translational elongation factor (EF) EF-G.
Included in this group is a domain of mitochondrial
Elongation factor G1 (mtEFG1) proteins homologous to
domain IV of EF-G. Eukaryotic cells harbor 2...; Region:
EFG_mtEFG1_IV; cd01434"
/db_xref="CDD:58274"
misc_feature 118853..119086
/gene="fusA"
/locus_tag="BAMEG_0123"
/note="EFG_mtEFG_C: domains similar to the C-terminal
domain of the bacterial translational elongation factor
(EF) EF-G. Included in this group is the C-terminus of
mitochondrial Elongation factor G1 (mtEFG1) and G2
(mtEFG2) proteins. Eukaryotic cells harbor 2...; Region:
EFG_mtEFG_C; cd03713"
/db_xref="CDD:58065"
gene 119249..120436
/gene="tuf"
/locus_tag="BAMEG_0124"
/db_xref="GeneID:7787135"
CDS 119249..120436
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="EF-Tu; promotes GTP-dependent binding of
aminoacyl-tRNA to the A-site of ribosomes during protein
biosynthesis; when the tRNA anticodon matches the mRNA
codon, GTP hydrolysis results; the inactive EF-Tu-GDP
leaves the ribosome and release of GDP is promoted by
elongation factor Ts; many prokaryotes have two copies of
the gene encoding EF-Tu"
/codon_start=1
/transl_table=11
/product="elongation factor Tu"
/protein_id="YP_002812790.1"
/db_xref="GI:227812781"
/db_xref="GeneID:7787135"
/translation="MAKAKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEA
RGYDQIDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGG
ILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSE
YGFPGDDIPVIKGSALKALQGEADWEAKIIELMAEVDAYIPTPERETDKPFLMPVEDV
FSITGRGTVATGRVERGIVKVGDVVEIIGLAEENASTTVTGVEMFRKLLDQAQAGDNI
GALLRGVAREDIQRGQVLAKSGSVKAHAKFKAEVFVLSKEEGGRHTPFFANYRPQFYF
RTTDVTGIIQLPEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVAT
IVE"
misc_feature 119249..120433
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="elongation factor Tu; Reviewed; Region: PRK00049"
/db_xref="CDD:178823"
misc_feature 119279..119857
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="Elongation Factor Tu (EF-Tu) GTP-binding proteins;
Region: EF_Tu; cd01884"
/db_xref="CDD:206671"
misc_feature 119303..119326
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="G1 box; other site"
/db_xref="CDD:206671"
misc_feature order(119306..119308,119312..119314,119324..119329,
119336..119338,119345..119350,119360..119362,
119444..119449,119501..119506,119573..119578,
119582..119593,119600..119602,119693..119695,
119705..119707,119783..119788)
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="GEF interaction site [polypeptide binding]; other
site"
/db_xref="CDD:206671"
misc_feature order(119312..119329,119387..119389,119654..119659,
119663..119665,119768..119776)
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206671"
misc_feature 119414..119446
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="Switch I region; other site"
/db_xref="CDD:206671"
misc_feature 119432..119434
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="G2 box; other site"
/db_xref="CDD:206671"
misc_feature 119489..119500
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="G3 box; other site"
/db_xref="CDD:206671"
misc_feature 119495..119551
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="Switch II region; other site"
/db_xref="CDD:206671"
misc_feature 119654..119665
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="G4 box; other site"
/db_xref="CDD:206671"
misc_feature 119768..119776
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="G5 box; other site"
/db_xref="CDD:206671"
misc_feature 119879..120142
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="EFTU_II: Elongation factor Tu domain II. Elongation
factors Tu (EF-Tu) are three-domain GTPases with an
essential function in the elongation phase of mRNA
translation. The GTPase center of EF-Tu is in the
N-terminal domain (domain I), also known as the...;
Region: EFTU_II; cd03697"
/db_xref="CDD:58088"
misc_feature 120149..120418
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="Domain III of elongation factor (EF) Tu. Ef-Tu
consists of three structural domains, designated I, II and
III. Domain III adopts a beta barrel structure. Domain III
is involved in binding to both charged tRNA and binding to
elongation factor Ts (EF-Ts); Region: EFTU_III; cd03707"
/db_xref="CDD:58073"
misc_feature order(120185..120187,120191..120199,120251..120253,
120371..120379,120407..120409)
/gene="tuf"
/locus_tag="BAMEG_0124"
/note="Antibiotic Binding Site [chemical binding]; other
site"
/db_xref="CDD:58073"
gene 120835..121143
/gene="rpsJ"
/locus_tag="BAMEG_0125"
/db_xref="GeneID:7783292"
CDS 120835..121143
/gene="rpsJ"
/locus_tag="BAMEG_0125"
/note="NusE; involved in assembly of the 30S subunit; in
the ribosome, this protein is involved in the binding of
tRNA; in Escherichia coli this protein was also found to
be involved in transcription antitermination; NusB/S10
heterodimers bind boxA sequences in the leader RNA of rrn
operons which is required for antitermination; binding of
NusB/S10 to boxA nucleates assembly of the antitermination
complex"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S10"
/protein_id="YP_002812791.1"
/db_xref="GI:227812782"
/db_xref="GeneID:7783292"
/translation="MAKEKIRIRLKAYDHRILDQSADKIVETAKRSGATVSGPIPLPT
EKTVYTILRAVHKYKDSREQFEMRTHKRLIDIVSPTPQTVDSLMRLDLPSGVDIEIKL
"
misc_feature 120835..121140
/gene="rpsJ"
/locus_tag="BAMEG_0125"
/note="30S ribosomal protein S10; Reviewed; Region: rpsJ;
PRK00596"
/db_xref="CDD:179076"
gene 121178..121810
/gene="rplC"
/locus_tag="BAMEG_0126"
/db_xref="GeneID:7784075"
CDS 121178..121810
/gene="rplC"
/locus_tag="BAMEG_0126"
/note="binds directly near the 3' end of the 23S rRNA,
where it nucleates assembly of the 50S subunit; essential
for peptidyltransferase activity; mutations in this gene
confer resistance to tiamulin"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L3"
/protein_id="YP_002812792.1"
/db_xref="GI:227812783"
/db_xref="GeneID:7784075"
/translation="MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETD
GYNAIQLGFEDKREKLTNKPEQGHTAKASTTPKRFIREIRDADVDGLEVGQEVKVDVF
ATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRVFKGKKL
AGRMGGDQVTIQNLEIVQVDTERNLLLVKGNVPGAKKSLVVVQGAVKVSK"
misc_feature 121178..121807
/gene="rplC"
/locus_tag="BAMEG_0126"
/note="50S ribosomal protein L3; Validated; Region: rplC;
PRK00001"
/db_xref="CDD:178784"
gene 121836..122459
/gene="rplD"
/locus_tag="BAMEG_0127"
/db_xref="GeneID:7785282"
CDS 121836..122459
/gene="rplD"
/locus_tag="BAMEG_0127"
/note="L4 is important during the early stages of 50S
assembly; it initially binds near the 5' end of the 23S
rRNA"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L4"
/protein_id="YP_002812793.1"
/db_xref="GI:227812784"
/db_xref="GeneID:7785282"
/translation="MPKVTVYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASL
RQGTHKVKTRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLP
KKVRRLAIKSALATKVVENNIVVLEDLVLNAPKTKDMLAVLKGLTVEKKALIVTADAN
ESVELSARNIPGVTVITADGVNVLDVLHHDKLIMTKAAVEKVEEVLA"
misc_feature 121839..122456
/gene="rplD"
/locus_tag="BAMEG_0127"
/note="50S ribosomal protein L4; Provisional; Region:
rplD; PRK05319"
/db_xref="CDD:180011"
gene 122459..122749
/gene="rplW"
/locus_tag="BAMEG_0128"
/db_xref="GeneID:7782341"
CDS 122459..122749
/gene="rplW"
/locus_tag="BAMEG_0128"
/note="binds third domain of 23S rRNA and protein L29;
part of exit tunnel"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L23"
/protein_id="YP_002812794.1"
/db_xref="GI:227812785"
/db_xref="GeneID:7782341"
/translation="MRDPRDIIKRPVITERSMEMMAEKKYTFDVDVKSNKTEVKDALE
AIFGVKVEKVNIMNYKPKAKRVGRHAGFTSRRRKAIVKLTADSKEIEIFQGV"
misc_feature 122471..122746
/gene="rplW"
/locus_tag="BAMEG_0128"
/note="50S ribosomal protein L23; Reviewed; Region: rplW;
PRK05738"
/db_xref="CDD:180228"
gene 122778..123608
/gene="rplB"
/locus_tag="BAMEG_0129"
/db_xref="GeneID:7785995"
CDS 122778..123608
/gene="rplB"
/locus_tag="BAMEG_0129"
/note="one of the primary rRNA-binding proteins; required
for association of the 30S and 50S subunits to form the
70S ribosome, for tRNA binding and peptide bond formation"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L2"
/protein_id="YP_002812795.1"
/db_xref="GI:227812786"
/db_xref="GeneID:7785995"
/translation="MGIKKYNPTTNGRRNMTTNDFAEITTDRPEKSLLAPLSKKAGRN
NQGKITVRHQGGGHKRQYRIIDFKRNKDGIPGRVATIEYDPNRSANIALINYVDGEKR
YILAPKNLEVGMEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGT
SAQVLGKEGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRSRWLGKRP
TVRGSVMNPVDHPHGGGEGRSPIGRKSPMSPWGKPTLGFKTRKKNKASDKFIVRRRKK
"
misc_feature 122778..123605
/gene="rplB"
/locus_tag="BAMEG_0129"
/note="50S ribosomal protein L2; Validated; Region: rplB;
PRK09374"
/db_xref="CDD:181807"
misc_feature 122901..123131
/gene="rplB"
/locus_tag="BAMEG_0129"
/note="Ribosomal Proteins L2, RNA binding domain; Region:
Ribosomal_L2; pfam00181"
/db_xref="CDD:109247"
misc_feature 123147..123536
/gene="rplB"
/locus_tag="BAMEG_0129"
/note="Ribosomal Proteins L2, C-terminal domain; Region:
Ribosomal_L2_C; pfam03947"
/db_xref="CDD:202823"
gene 123669..123947
/gene="rpsS"
/locus_tag="BAMEG_0130"
/db_xref="GeneID:7786393"
CDS 123669..123947
/gene="rpsS"
/locus_tag="BAMEG_0130"
/note="protein S19 forms a complex with S13 that binds
strongly to the 16S ribosomal RNA"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S19"
/protein_id="YP_002812796.1"
/db_xref="GI:227812787"
/db_xref="GeneID:7786393"
/translation="MARSLKKGPFVDDHLMSKIAKLNETEQKQVVKTWSRRSTIFPQF
IGHTIAVYDGRKHVPVYVTEDMVGHKLGEFAPTRTYKGHDADDKKTRR"
misc_feature 123669..123944
/gene="rpsS"
/locus_tag="BAMEG_0130"
/note="30S ribosomal protein S19; Reviewed; Region: rpsS;
PRK00357"
/db_xref="CDD:178985"
gene 123965..124306
/gene="rplV"
/locus_tag="BAMEG_0131"
/db_xref="GeneID:7784470"
CDS 123965..124306
/gene="rplV"
/locus_tag="BAMEG_0131"
/note="binds specifically to 23S rRNA during the early
stages of 50S assembly; makes contact with all 6 domains
of the 23S rRNA in the assembled 50S subunit and ribosome;
mutations in this gene result in erythromycin resistance;
located near peptidyl-transferase center"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L22"
/protein_id="YP_002812797.1"
/db_xref="GI:227812788"
/db_xref="GeneID:7784470"
/translation="MQAKAVARTVRIAPRKVRLVVDLIRGKQVGEAIAILNHTPKTAS
PVVEKVLKSAIANAEHNYEMDINSLVVEKVFVDEGPTLKRFRPRAMGRASQINKRTSH
ITVVVSEKKEG"
misc_feature 123971..124285
/gene="rplV"
/locus_tag="BAMEG_0131"
/note="Ribosomal protein L22/L17e. L22 (L17 in
eukaryotes) is a core protein of the large ribosomal
subunit. It is the only ribosomal protein that interacts
with all six domains of 23S rRNA, and is one of the
proteins important for directing the proper...; Region:
Ribosomal_L22; cd00336"
/db_xref="CDD:48343"
misc_feature order(123971..123976,124040..124048,124052..124057,
124061..124066,124127..124144,124169..124186,
124280..124285)
/gene="rplV"
/locus_tag="BAMEG_0131"
/note="putative translocon binding site; other site"
/db_xref="CDD:48343"
misc_feature order(123980..123982,123986..123988,123995..123997,
124001..124009,124016..124018,124028..124030,
124037..124039,124121..124123,124133..124135,
124142..124144,124181..124183,124187..124195,
124199..124201,124208..124210,124244..124261)
/gene="rplV"
/locus_tag="BAMEG_0131"
/note="protein-rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:48343"
gene 124310..124969
/gene="rpsC"
/locus_tag="BAMEG_0132"
/db_xref="GeneID:7783715"
CDS 124310..124969
/gene="rpsC"
/locus_tag="BAMEG_0132"
/note="forms a complex with S10 and S14; binds the lower
part of the 30S subunit head and the mRNA in the complete
ribosome to position it for translation"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S3"
/protein_id="YP_002812798.1"
/db_xref="GI:227812789"
/db_xref="GeneID:7783715"
/translation="MGQKVNPIGLRVGVIRDWESRWFAEKDYATLLHEDIKIREYINV
RLKDSAVAKVEIERAANRVNVTIHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINI
LEVKRADLNAKLVGENIARQLENRVSFRRAQKQVIQRAMRAGAKGIKTQVSGRLGGAD
IARAESYSEGTVPLHTLRADIDYAAVEADTTYGKLGVKVWIYRGEVLPTKKKASEEGG
K"
misc_feature 124310..124966
/gene="rpsC"
/locus_tag="BAMEG_0132"
/note="30S ribosomal protein S3; Reviewed; Region: rpsC;
PRK00310"
/db_xref="CDD:178972"
misc_feature 124313..124630
/gene="rpsC"
/locus_tag="BAMEG_0132"
/note="K homology RNA-binding (KH) domain of the
prokaryotic 30S small ribosomal subunit protein S3. S3 is
part of the head region of the 30S ribosomal subunit and
is believed to interact with mRNA as it threads its way
from the latch into the channel. The KH...; Region:
30S_S3_KH; cd02412"
/db_xref="CDD:48410"
misc_feature 124538..124549
/gene="rpsC"
/locus_tag="BAMEG_0132"
/note="G-X-X-G motif; other site"
/db_xref="CDD:48410"
misc_feature 124661..124912
/gene="rpsC"
/locus_tag="BAMEG_0132"
/note="Ribosomal protein S3, C-terminal domain; Region:
Ribosomal_S3_C; pfam00189"
/db_xref="CDD:201068"
gene 124971..125405
/gene="rplP"
/locus_tag="BAMEG_0133"
/db_xref="GeneID:7784147"
CDS 124971..125405
/gene="rplP"
/locus_tag="BAMEG_0133"
/note="located in the peptidyl transferase center and may
be involved in peptidyl transferase activity; similar to
archaeal L10e"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L16"
/protein_id="YP_002812799.1"
/db_xref="GI:227812790"
/db_xref="GeneID:7784147"
/translation="MLMPKRVKYRREHRGKMRGRAKGGTEIAFGEFGLQAQAASWITN
RQIEAARRAMTRYMKRGGKVWIKIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPGKI
MFEIAGVSEEVAREALRLAAHKLPVKCKFVKREENGGESNEN"
misc_feature 125037..125366
/gene="rplP"
/locus_tag="BAMEG_0133"
/note="Ribosomal_L16_L10e: L16 is an essential protein in
the large ribosomal subunit of bacteria, mitochondria, and
chloroplasts. Large subunits that lack L16 are defective
in peptidyl transferase activity, peptidyl-tRNA hydrolysis
activity, association with...; Region: Ribosomal_L16_L10e;
cd01433"
/db_xref="CDD:88606"
misc_feature order(125037..125039,125043..125048,125055..125057,
125103..125108,125115..125117,125124..125126,
125136..125138,125145..125147,125163..125171,
125175..125177,125181..125183,125193..125198,
125217..125231,125271..125273,125325..125330,
125337..125342)
/gene="rplP"
/locus_tag="BAMEG_0133"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88606"
misc_feature 125082..125087
/gene="rplP"
/locus_tag="BAMEG_0133"
/note="5S rRNA interface [nucleotide binding]; other site"
/db_xref="CDD:88606"
misc_feature order(125118..125126,125133..125138)
/gene="rplP"
/locus_tag="BAMEG_0133"
/note="putative antibiotic binding site [chemical
binding]; other site"
/db_xref="CDD:88606"
misc_feature order(125145..125147,125154..125159,125163..125165,
125289..125291)
/gene="rplP"
/locus_tag="BAMEG_0133"
/note="L25 interface [polypeptide binding]; other site"
/db_xref="CDD:88606"
misc_feature order(125211..125216,125223..125228)
/gene="rplP"
/locus_tag="BAMEG_0133"
/note="L27 interface [polypeptide binding]; other site"
/db_xref="CDD:88606"
gene 125395..125595
/gene="rpmC"
/locus_tag="BAMEG_0134"
/db_xref="GeneID:7784801"
CDS 125395..125595
/gene="rpmC"
/locus_tag="BAMEG_0134"
/note="one of the stabilizing components for the large
ribosomal subunit"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L29"
/protein_id="YP_002812800.1"
/db_xref="GI:227812791"
/db_xref="GeneID:7784801"
/translation="MKTNDIRELTTAEIETKVKALKEELFNLRFQLATGQLENPTRIR
EVRKAIARMKTVVREREIGINR"
misc_feature 125404..125574
/gene="rpmC"
/locus_tag="BAMEG_0134"
/note="Ribosomal L29 protein/HIP. L29 is a protein of the
large ribosomal Subunit. A homolog, called heparin/heparan
sulfate interacting protein (HIP), has also been
identified in mammals. L29 is located on the surface of
the large ribosomal subunit, where it...; Region:
Ribosomal_L29_HIP; cd00427"
/db_xref="CDD:88602"
misc_feature order(125404..125406,125413..125415,125515..125517,
125545..125550,125554..125559,125569..125571)
/gene="rpmC"
/locus_tag="BAMEG_0134"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88602"
misc_feature order(125404..125412,125416..125418,125428..125433,
125437..125442,125449..125454,125461..125466,
125473..125475,125482..125487,125509..125511,
125518..125520,125530..125532,125539..125544,
125551..125556,125563..125565)
/gene="rpmC"
/locus_tag="BAMEG_0134"
/note="putative translocon interaction site; other site"
/db_xref="CDD:88602"
misc_feature order(125452..125454,125464..125466,125473..125475,
125485..125487,125530..125532)
/gene="rpmC"
/locus_tag="BAMEG_0134"
/note="signal recognition particle (SRP54) interaction
site; other site"
/db_xref="CDD:88602"
misc_feature order(125470..125472,125479..125484)
/gene="rpmC"
/locus_tag="BAMEG_0134"
/note="L23 interface [polypeptide binding]; other site"
/db_xref="CDD:88602"
misc_feature 125491..125496
/gene="rpmC"
/locus_tag="BAMEG_0134"
/note="trigger factor interaction site; other site"
/db_xref="CDD:88602"
gene 125616..125879
/gene="rpsQ"
/locus_tag="BAMEG_0135"
/db_xref="GeneID:7782683"
CDS 125616..125879
/gene="rpsQ"
/locus_tag="BAMEG_0135"
/note="primary binding protein; helps mediate assembly;
involved in translation fidelity"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S17"
/protein_id="YP_002812801.1"
/db_xref="GI:227812792"
/db_xref="GeneID:7782683"
/translation="MSERNQRKVYTGRVVSDKMDKTITVLVETYKTHSLYGKRVKYSK
KYKAHDEQNQAKLGDIVKIMETRPLSATKRFRLVEIVEEAVII"
misc_feature 125622..125870
/gene="rpsQ"
/locus_tag="BAMEG_0135"
/note="30S ribosomal protein S17; Reviewed; Region: rpsQ;
PRK05610"
/db_xref="CDD:180162"
gene 125923..126291
/gene="rplN"
/locus_tag="BAMEG_0136"
/db_xref="GeneID:7787500"
CDS 125923..126291
/gene="rplN"
/locus_tag="BAMEG_0136"
/note="binds to the 23S rRNA between the centers for
peptidyl transferase and GTPase"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L14"
/protein_id="YP_002812802.1"
/db_xref="GI:227812793"
/db_xref="GeneID:7787500"
/translation="MIQQESRLKVADNSGARELLTIKVLGGSGRKYANIGDIIVATVK
QATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPV
ARELRDSNFMKIVSLAPEVL"
misc_feature 125923..126288
/gene="rplN"
/locus_tag="BAMEG_0136"
/note="50S ribosomal protein L14; Validated; Region: rplN;
PRK05483"
/db_xref="CDD:180117"
gene 126330..126641
/gene="rplX"
/locus_tag="BAMEG_0137"
/db_xref="GeneID:7784836"
CDS 126330..126641
/gene="rplX"
/locus_tag="BAMEG_0137"
/note="assembly initiator protein; binds to 5' end of 23S
rRNA and nucleates assembly of the 50S; surrounds
polypeptide exit tunnel"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L24"
/protein_id="YP_002812803.1"
/db_xref="GI:227812794"
/db_xref="GeneID:7784836"
/translation="MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKH
SKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKVEDGKKVRIAKKSGELLD
K"
misc_feature 126330..126635
/gene="rplX"
/locus_tag="BAMEG_0137"
/note="50S ribosomal protein L24; Reviewed; Region: rplX;
PRK00004"
/db_xref="CDD:178786"
misc_feature 126330..126533
/gene="rplX"
/locus_tag="BAMEG_0137"
/note="50S ribosomal protein L24; Reviewed; Region: rplX;
PRK12281"
/db_xref="CDD:183399"
gene 126668..127207
/gene="rplE"
/locus_tag="BAMEG_0138"
/db_xref="GeneID:7783206"
CDS 126668..127207
/gene="rplE"
/locus_tag="BAMEG_0138"
/note="part of 50S and 5S/L5/L18/L25 subcomplex; contacts
5S rRNA and P site tRNA; forms a bridge to the 30S subunit
in the ribosome by binding to S13"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L5"
/protein_id="YP_002812804.1"
/db_xref="GI:227812795"
/db_xref="GeneID:7783206"
/translation="MNRLKEKFQKEITPALVSKFNYKSVMQVPKIEKIVINTGVGDAV
SNSKTLDNAVEELTQITGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGEQMYEFFDK
LVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTA
KTDEEARELLTQFGMPFQK"
misc_feature 126668..127204
/gene="rplE"
/locus_tag="BAMEG_0138"
/note="50S ribosomal protein L5; Validated; Region: rplE;
PRK00010"
/db_xref="CDD:178791"
misc_feature 126737..126907
/gene="rplE"
/locus_tag="BAMEG_0138"
/note="Ribosomal protein L5; Region: Ribosomal_L5;
pfam00281"
/db_xref="CDD:109342"
misc_feature 126917..127198
/gene="rplE"
/locus_tag="BAMEG_0138"
/note="ribosomal L5P family C-terminus; Region:
Ribosomal_L5_C; pfam00673"
/db_xref="CDD:201383"
gene 127241..127426
/gene="rpsN"
/locus_tag="BAMEG_0139"
/db_xref="GeneID:7782387"
CDS 127241..127426
/gene="rpsN"
/locus_tag="BAMEG_0139"
/note="located in the peptidyl transferase center and
involved in assembly of 30S ribosome subunit; similar to
what is observed with proteins L31 and L33, some proteins
in this family contain CXXC motifs that are involved in
zinc binding; if two copies are present in a genome, then
the duplicated copy appears to have lost the zinc-binding
motif and is instead regulated by zinc; the proteins in
this group appear to contain the zinc-binding motif"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S14"
/protein_id="YP_002812805.1"
/db_xref="GI:227812796"
/db_xref="GeneID:7782387"
/translation="MAKKSMIAKQKRTPKFKVQEYTRCERCGRPHSVYRKFKLCRICF
RELAYKGQIPGVKKASW"
misc_feature 127241..127423
/gene="rpsN"
/locus_tag="BAMEG_0139"
/note="30S ribosomal protein S14; Reviewed; Region: rpsN;
PRK08061"
/db_xref="CDD:181216"
gene 127456..127854
/gene="rpsH"
/locus_tag="BAMEG_0140"
/db_xref="GeneID:7784190"
CDS 127456..127854
/gene="rpsH"
/locus_tag="BAMEG_0140"
/note="binds directly to 16S rRNA central domain where it
helps coordinate assembly of the platform of the 30S
subunit"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S8"
/protein_id="YP_002812806.1"
/db_xref="GI:227812797"
/db_xref="GeneID:7784190"
/translation="MVMTDPIADMLTRIRNANMVRHEKLEVPASKIKKEIAELLKREG
FIRDVEYIEDNKQGILRIFLKYGANNERVITGLKRISKPGLRVYAKADEVPRVLNGLG
IALVSTSKGVMTDKDARQLQTGGEVVAYVW"
misc_feature 127459..127851
/gene="rpsH"
/locus_tag="BAMEG_0140"
/note="30S ribosomal protein S8; Validated; Region: rpsH;
PRK00136"
/db_xref="CDD:178892"
gene 127887..128426
/gene="rplF"
/locus_tag="BAMEG_0141"
/db_xref="GeneID:7783298"
CDS 127887..128426
/gene="rplF"
/locus_tag="BAMEG_0141"
/note="ribosomal protein L6 appears to have arisen as a
result of an ancient gene duplication as based on
structural comparison of the Bacillus stearothermophilus
protein; RNA-binding appears to be in the C-terminal
domain; mutations in the L6 gene confer resistance to
aminoglycoside antibiotics such as gentamicin and these
occur in truncations of the C-terminal domain; it has been
localized to a region between the base of the L7/L12 stalk
and the central protuberance"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L6"
/protein_id="YP_002812807.1"
/db_xref="GI:227812798"
/db_xref="GeneID:7783298"
/translation="MSRIGKKILEIPAGVTITVAEDNTVTVKGPKGELTRTFNADMLI
KIEENTLTVERPSEQKEHRALHGTTRALIGNMVEGVTEGFARGLELVGVGYRAQKQGD
KLVLSVGYSHPVEMTPEAGLEVEVPAPTKIVIKGIDKQRVGEFAANIRAVRAPEPYKG
KGIRYEGEVVRRKEGKTAK"
misc_feature 127887..128423
/gene="rplF"
/locus_tag="BAMEG_0141"
/note="50S ribosomal protein L6; Validated; Region: rplF;
PRK05498"
/db_xref="CDD:180118"
misc_feature 127917..128135
/gene="rplF"
/locus_tag="BAMEG_0141"
/note="Ribosomal protein L6; Region: Ribosomal_L6;
pfam00347"
/db_xref="CDD:109407"
misc_feature 128157..128381
/gene="rplF"
/locus_tag="BAMEG_0141"
/note="Ribosomal protein L6; Region: Ribosomal_L6;
pfam00347"
/db_xref="CDD:109407"
gene 128458..128820
/gene="rplR"
/locus_tag="BAMEG_0142"
/db_xref="GeneID:7782680"
CDS 128458..128820
/gene="rplR"
/locus_tag="BAMEG_0142"
/note="binds 5S rRNA along with protein L5 and L25"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L18"
/protein_id="YP_002812808.1"
/db_xref="GI:227812799"
/db_xref="GeneID:7782680"
/translation="MITKADKNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQV
IDDVNGVTLVSASTLDKDLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLY
HGRVKALAEAAREAGLQF"
misc_feature 128512..128811
/gene="rplR"
/locus_tag="BAMEG_0142"
/note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal
protein found in the central protuberance (CP) of the
large subunit. L18 binds 5S rRNA and induces a
conformational change that stimulates the binding of L5 to
5S rRNA. Association of 5S rRNA with 23S rRNA...; Region:
Ribosomal_L18_L5e; cd00432"
/db_xref="CDD:88603"
misc_feature order(128515..128517,128521..128526,128530..128532,
128545..128547,128557..128574,128578..128580,
128584..128586,128605..128613,128620..128622,
128737..128739,128770..128772)
/gene="rplR"
/locus_tag="BAMEG_0142"
/note="5S rRNA interface [nucleotide binding]; other site"
/db_xref="CDD:88603"
misc_feature order(128515..128517,128524..128529)
/gene="rplR"
/locus_tag="BAMEG_0142"
/note="L27 interface [polypeptide binding]; other site"
/db_xref="CDD:88603"
misc_feature order(128518..128523,128740..128742,128749..128751,
128797..128799)
/gene="rplR"
/locus_tag="BAMEG_0142"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88603"
misc_feature 128755..128757
/gene="rplR"
/locus_tag="BAMEG_0142"
/note="L5 interface [polypeptide binding]; other site"
/db_xref="CDD:88603"
gene 128842..129342
/gene="rpsE"
/locus_tag="BAMEG_0143"
/db_xref="GeneID:7786110"
CDS 128842..129342
/gene="rpsE"
/locus_tag="BAMEG_0143"
/note="located at the back of the 30S subunit body where
it stabilizes the conformation of the head with respect to
the body; contacts S4 and S8; with S4 and S12 plays a role
in translational accuracy; mutations in this gene result
in spectinomycin resistance"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S5"
/protein_id="YP_002812809.1"
/db_xref="GI:227812800"
/db_xref="GeneID:7786110"
/translation="MHRIDPSKLELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNG
HVGFGTGKAQEVPDAIRKAIEDAKKNLIAVPLVGTTIPHTINGHFGAGEVFLKPAAEG
TGVIAGGPVRAVLELAGVQDILSKSLGSNTPINMIRATVNGLSELKRAEDVAKLRGKS
VEELLG"
misc_feature 128842..129339
/gene="rpsE"
/locus_tag="BAMEG_0143"
/note="30S ribosomal protein S5; Validated; Region: rpsE;
PRK00550"
/db_xref="CDD:179061"
misc_feature 128869..129069
/gene="rpsE"
/locus_tag="BAMEG_0143"
/note="Ribosomal protein S5, N-terminal domain; Region:
Ribosomal_S5; pfam00333"
/db_xref="CDD:144065"
misc_feature 129094..129315
/gene="rpsE"
/locus_tag="BAMEG_0143"
/note="Ribosomal protein S5, C-terminal domain; Region:
Ribosomal_S5_C; pfam03719"
/db_xref="CDD:190724"
gene 129356..129538
/gene="rpmD"
/locus_tag="BAMEG_0144"
/db_xref="GeneID:7782732"
CDS 129356..129538
/gene="rpmD"
/locus_tag="BAMEG_0144"
/note="L30 binds domain II of the 23S rRNA and the 5S
rRNA; similar to eukaryotic protein L7"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L30"
/protein_id="YP_002812810.1"
/db_xref="GI:227812801"
/db_xref="GeneID:7782732"
/translation="MAKKLEITLTRSVIGRPQDQRATVEALGLKKLNSTVVKEETPAI
LGMINKVSHLVTVKEA"
misc_feature 129368..129526
/gene="rpmD"
/locus_tag="BAMEG_0144"
/note="Ribosomal protein L30, which is found in eukaryotes
and prokaryotes but not in archaea, is one of the smallest
ribosomal proteins with a molecular mass of about 7kDa.
L30 binds the 23SrRNA as well as the 5S rRNA and is one of
five ribosomal proteins that...; Region: Ribosomal_L30;
cd01658"
/db_xref="CDD:100100"
misc_feature order(129386..129391,129395..129400,129404..129412,
129419..129424,129431..129439,129443..129445,
129452..129454,129467..129472,129479..129487,
129491..129496)
/gene="rpmD"
/locus_tag="BAMEG_0144"
/note="23S rRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:100100"
gene 129572..130012
/gene="rplO"
/locus_tag="BAMEG_0145"
/db_xref="GeneID:7786420"
CDS 129572..130012
/gene="rplO"
/locus_tag="BAMEG_0145"
/note="late assembly protein"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L15"
/protein_id="YP_002812811.1"
/db_xref="GI:227812802"
/db_xref="GeneID:7786420"
/translation="MKLHELKPAEGSRKVRNRVGRGIGSGNGKTAGKGHKGQNARSGG
GVRLGFEGGQTPLFRRLPKRGFTNINRKEFAIVNLSTLNRFEDGTEVTPELLLETGVI
SKLNDGVKILASGAVEKKLTVKAHKFSSSAKEAIEAAGGSVEVI"
misc_feature 129572..130009
/gene="rplO"
/locus_tag="BAMEG_0145"
/note="50S ribosomal protein L15; Reviewed; Region: rplO;
PRK05592"
/db_xref="CDD:180155"
gene 130012..131313
/gene="secY"
/locus_tag="BAMEG_0146"
/db_xref="GeneID:7785583"
CDS 130012..131313
/gene="secY"
/locus_tag="BAMEG_0146"
/note="forms heterotrimeric complex in the membrane; in
bacteria the complex consists of SecY which forms the
channel pore and SecE and SecG; the SecG subunit is not
essential; in bacteria translocation is driven via the
SecA ATPase"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecY"
/protein_id="YP_002812812.1"
/db_xref="GI:227812803"
/db_xref="GeneID:7785583"
/translation="MFRTISNFMRVAEIRRKILFTLAMLIVFRIGTFIPVPFTNGDVL
KAQDQLNALGILNTFGGGALKNFSIFAMGIMPYITASIIVQLLQMDVVPKFSEWAKQG
EMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNGMVGGQLILNPGWSTYLYIATVLTAGT
AFLMWLGEQITAKGVGNGISILIFGGIAAAIPSVISQVYQQQFQNIGDQLFMSIVKVA
LILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNGGYAGAQNTHLPLKVNSAGVIPV
IFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGMIIYVALIVAFTYFYAFVQVN
PEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGSIFLAAIAILPVIFTKLGN
LPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYKGFIKQ"
misc_feature 130012..131310
/gene="secY"
/locus_tag="BAMEG_0146"
/note="preprotein translocase subunit SecY; Reviewed;
Region: secY; PRK12907"
/db_xref="CDD:183828"
misc_feature 130213..131259
/gene="secY"
/locus_tag="BAMEG_0146"
/note="SecY translocase; Region: SecY; pfam00344"
/db_xref="CDD:201169"
gene 131370..132020
/gene="adk"
/locus_tag="BAMEG_0147"
/db_xref="GeneID:7784830"
CDS 131370..132020
/gene="adk"
/locus_tag="BAMEG_0147"
/EC_number="2.7.4.3"
/note="essential enzyme that recycles AMP in active cells;
converts ATP and AMP to two molecules of ADP"
/codon_start=1
/transl_table=11
/product="adenylate kinase"
/protein_id="YP_002812813.1"
/db_xref="GI:227812804"
/db_xref="GeneID:7784830"
/translation="MNLILMGLPGAGKGTQAEQIVAKYNIPHISTGDMFRAAMKAETE
MGLQAKSFIDKGALVPDEVTIGIVRERLSQEDCVRGFLLDGFPRTVAQASALEEIMKD
LGKKIDYVLNINVDSGLLLKRLTGRRICKECGATYHLEFNAPAKADVCDKCGGELYQR
SDDNEETVANRLDVNIKQTKPLLDFYEELGYLQSINGEQDINKVFADIDVLIGGLA"
misc_feature 131370..132014
/gene="adk"
/locus_tag="BAMEG_0147"
/note="adenylate kinase; Reviewed; Region: adk; PRK00279"
/db_xref="CDD:178957"
misc_feature 131373..131981
/gene="adk"
/locus_tag="BAMEG_0147"
/note="Adenylate kinase (ADK) catalyzes the reversible
phosphoryl transfer from adenosine triphosphates (ATP) to
adenosine monophosphates (AMP) and to yield adenosine
diphosphates (ADP). This enzyme is required for the
biosynthesis of ADP and is essential for...; Region: ADK;
cd01428"
/db_xref="CDD:30189"
misc_feature order(131460..131462,131475..131477,131544..131546,
131619..131624,131628..131633,131643..131645)
/gene="adk"
/locus_tag="BAMEG_0147"
/note="AMP-binding site [chemical binding]; other site"
/db_xref="CDD:30189"
misc_feature order(131475..131477,131619..131621,131631..131633,
131748..131750,131880..131882,131892..131894)
/gene="adk"
/locus_tag="BAMEG_0147"
/note="ATP-AMP (Ap5A)-binding site [chemical binding];
other site"
/db_xref="CDD:30189"
gene 132056..132766
/gene="maP1"
/locus_tag="BAMEG_0148"
/db_xref="GeneID:7783238"
CDS 132056..132766
/gene="maP1"
/locus_tag="BAMEG_0148"
/EC_number="3.4.11.18"
/note="catalyzes the removal of N-terminal amino acids
from peptides and arylamides; generally Co(II) however
activity has been shown for some methionine
aminopeptidases with Zn, Fe, or Mn"
/codon_start=1
/transl_table=11
/product="methionine aminopeptidase"
/protein_id="YP_002812814.1"
/db_xref="GI:227812805"
/db_xref="GeneID:7783238"
/translation="MREAGRIVALTHQELKQHITPGITTKELDQIAEKTIQKYGATPS
FKGYNGFPGSICASVNEELVHGIPGKRKLKEGDIISIDIGAKYNGYHGDSAWTYPVGN
ISESVQKLLDVTEKSLYLGLEQVKPGERLSNISHAVQTHAEENGFSIVREYVGHGIGQ
DLHEDPQIPHYGPPNRGPRLKPGMVICVEPMVNQGRRYVKTLSDDWTVVTVDGKWCAH
FEHTIALTEAGYEILTTL"
misc_feature 132056..132757
/gene="maP1"
/locus_tag="BAMEG_0148"
/note="Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also
known as methionyl aminopeptidase and Peptidase M.
Catalyzes release of N-terminal amino acids,
preferentially methionine, from peptides and arylamides;
Region: MetAP1; cd01086"
/db_xref="CDD:29971"
misc_feature order(132248..132250,132299..132301,132332..132334,
132521..132523,132620..132622,132713..132715)
/gene="maP1"
/locus_tag="BAMEG_0148"
/note="active site"
/db_xref="CDD:29971"
gene 132835..133053
/gene="infA"
/locus_tag="BAMEG_0149"
/db_xref="GeneID:7786805"
CDS 132835..133053
/gene="infA"
/locus_tag="BAMEG_0149"
/note="stimulates the activities of the other two
initiation factors, IF-2 and IF-3"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-1"
/protein_id="YP_002812815.1"
/db_xref="GI:227812806"
/db_xref="GeneID:7786805"
/translation="MAKDDVIEVEGTVLETLPNAMFKVELENGHVVLAHVSGKIRMNF
IRILPGDKVTVELSPYDLNRGRITYRFK"
misc_feature 132853..133044
/gene="infA"
/locus_tag="BAMEG_0149"
/note="S1_IF1: Translation Initiation Factor IF1, S1-like
RNA-binding domain. IF1 contains an S1-like RNA-binding
domain, which is found in a wide variety of RNA-associated
proteins. Translation initiation includes a number of
interrelated steps preceding the...; Region: S1_IF1;
cd04451"
/db_xref="CDD:88417"
misc_feature order(132877..132885,132901..132903,132937..132939,
132946..132951,132964..132975,133024..133026,
133030..133032)
/gene="infA"
/locus_tag="BAMEG_0149"
/note="rRNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88417"
misc_feature order(132937..132939,132949..132951,133042..133044)
/gene="infA"
/locus_tag="BAMEG_0149"
/note="predicted 30S ribosome binding site; other site"
/db_xref="CDD:88417"
gene 133089..133202
/gene="rpmJ"
/locus_tag="BAMEG_0150"
/db_xref="GeneID:7783995"
CDS 133089..133202
/gene="rpmJ"
/locus_tag="BAMEG_0150"
/note="smallest protein in the large subunit; similar to
what is found with protein L31 and L33 several bacterial
genomes contain paralogs which may be regulated by zinc;
the protein from Thermus thermophilus has a zinc-binding
motif and contains a bound zinc ion; the proteins in this
group have the motif"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L36"
/protein_id="YP_002812816.1"
/db_xref="GI:227812807"
/db_xref="GeneID:7783995"
/translation="MKVRPSVKPICEKCKVIRRRGKVMVICENPKHKQKQG"
misc_feature 133089..133199
/gene="rpmJ"
/locus_tag="BAMEG_0150"
/note="50S ribosomal protein L36; Reviewed; Region: rpmJ;
PRK00465"
/db_xref="CDD:179039"
gene 133224..133589
/gene="rpsM"
/locus_tag="BAMEG_0151"
/db_xref="GeneID:7784085"
CDS 133224..133589
/gene="rpsM"
/locus_tag="BAMEG_0151"
/note="located at the top of the head of the 30S subunit,
it contacts several helices of the 16S rRNA; makes contact
with the large subunit via RNA-protein interactions and
via protein-protein interactions with L5; contacts P-site
tRNA"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S13"
/protein_id="YP_002812817.1"
/db_xref="GI:227812808"
/db_xref="GeneID:7784085"
/translation="MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETR
VRDLTEDELGRIRDIIDRIKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNS
KNNARTRKGPRRTVANKKK"
misc_feature 133224..133586
/gene="rpsM"
/locus_tag="BAMEG_0151"
/note="30S ribosomal protein S13; Validated; Region: rpsM;
PRK05179"
/db_xref="CDD:179955"
misc_feature 133230..133565
/gene="rpsM"
/locus_tag="BAMEG_0151"
/note="Ribosomal protein S13/S18; Region: Ribosomal_S13;
cl00331"
/db_xref="CDD:214049"
gene 133614..134003
/gene="rpsK"
/locus_tag="BAMEG_0152"
/db_xref="GeneID:7783640"
CDS 133614..134003
/gene="rpsK"
/locus_tag="BAMEG_0152"
/note="located on the platform of the 30S subunit, it
bridges several disparate RNA helices of the 16S rRNA;
forms part of the Shine-Dalgarno cleft in the 70S
ribosome; interacts with S7 and S18 and IF-3"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S11"
/protein_id="YP_002812818.1"
/db_xref="GI:227812809"
/db_xref="GeneID:7783640"
/translation="MARKTNTRKKRVKKNIEAGVAHIRSTFNNTIVTLTDTHGNALSW
SSAGALGFRGSRKSTPFAAQMAAETAAKAAMEHGLKTLEVTVKGPGAGREAAIRALQA
AGLEVTAIRDVTPVPHNGCRPPKRRRV"
misc_feature 133659..134000
/gene="rpsK"
/locus_tag="BAMEG_0152"
/note="30S ribosomal protein S11; Validated; Region:
PRK05309"
/db_xref="CDD:180007"
gene 134184..135128
/gene="rpoA"
/locus_tag="BAMEG_0153"
/db_xref="GeneID:7784862"
CDS 134184..135128
/gene="rpoA"
/locus_tag="BAMEG_0153"
/EC_number="2.7.7.6"
/note="catalyzes the transcription of DNA into RNA using
the four ribonucleoside triphosphates as substrates.
Dimerization of the alpha subunit is the first step in the
sequential assembly of subunits to form the holoenzyme"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit alpha"
/protein_id="YP_002812819.1"
/db_xref="GI:227812810"
/db_xref="GeneID:7784862"
/translation="MIEIEKPKIETVELNEDAKYGKFVIEPLERGYGTTLGNSLRRIL
LSSLPGAAVTAIQIDGVLHEFSTVEGVVEDVTTIILNLKKLALKIYSEEEKTLEIDVQ
GEGIVTAADITHDSDVEILNPDLHIATLAKDAHFRVRLTAKRGRGYTPADANKSEDQP
IGVIPIDSIYTPVSRVTYQVEKTRVGQVANYDKLTLDVWTDGSIGPKEAISLGAKILT
EHLNIFVGLTDEAQNAEIMVEKEEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQE
LANKTEEDMMKVRNLGRKSLEEVKHKLEELGLGLRKDD"
misc_feature 134187..135119
/gene="rpoA"
/locus_tag="BAMEG_0153"
/note="DNA-directed RNA polymerase subunit alpha;
Provisional; Region: PRK05182"
/db_xref="CDD:179956"
misc_feature 134226..134855
/gene="rpoA"
/locus_tag="BAMEG_0153"
/note="N-terminal domain of the Alpha subunit of Bacterial
RNA polymerase; Region: RNAP_alpha_NTD; cd06928"
/db_xref="CDD:132904"
misc_feature order(134247..134249,134283..134285,134295..134297,
134304..134309,134370..134372,134376..134378,
134382..134384,134388..134399,134412..134414,
134430..134432,134574..134576,134625..134627,
134682..134684,134688..134690,134706..134714,
134718..134729,134757..134759,134766..134768,
134772..134774)
/gene="rpoA"
/locus_tag="BAMEG_0153"
/note="alphaNTD - beta interaction site [polypeptide
binding]; other site"
/db_xref="CDD:132904"
misc_feature order(134256..134258,134265..134267,134271..134279,
134286..134288,134298..134300,134307..134312,
134322..134324,134823..134825,134832..134837,
134841..134846,134850..134855)
/gene="rpoA"
/locus_tag="BAMEG_0153"
/note="alphaNTD homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:132904"
misc_feature order(134376..134378,134412..134414,134421..134423,
134430..134435,134622..134627,134631..134633,
134688..134690,134703..134708,134733..134735)
/gene="rpoA"
/locus_tag="BAMEG_0153"
/note="alphaNTD - beta' interaction site [polypeptide
binding]; other site"
/db_xref="CDD:132904"
misc_feature 134898..135098
/gene="rpoA"
/locus_tag="BAMEG_0153"
/note="Bacterial RNA polymerase, alpha chain C terminal
domain; Region: RNA_pol_A_CTD; pfam03118"
/db_xref="CDD:202541"
gene 135164..135526
/gene="rplQ"
/locus_tag="BAMEG_0154"
/db_xref="GeneID:7782897"
CDS 135164..135526
/gene="rplQ"
/locus_tag="BAMEG_0154"
/note="is a component of the macrolide binding site in the
peptidyl transferase center"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L17"
/protein_id="YP_002812820.1"
/db_xref="GI:227812811"
/db_xref="GeneID:7782897"
/translation="MAYRKLGRTSAQRKAMLRDLATDLIINERIQTTETRAKELRSVV
EKMITLGKRGDLHARRQAAAFIRNEVANAETGQDALQKLFADVAPRYAERQGGYTRIA
KIGPRRGDAAPMVIIELV"
misc_feature 135164..135523
/gene="rplQ"
/locus_tag="BAMEG_0154"
/note="50S ribosomal protein L17; Validated; Region: rplQ;
PRK05591"
/db_xref="CDD:180154"
gene 135630..136472
/gene="cbiO"
/locus_tag="BAMEG_0155"
/db_xref="GeneID:7784713"
CDS 135630..136472
/gene="cbiO"
/locus_tag="BAMEG_0155"
/note="with CbiNQ forms the ABC transporter for cobalt
import; Bacillus spp. have two adjacent copies of this
gene"
/codon_start=1
/transl_table=11
/product="cobalt transporter ATP-binding subunit"
/protein_id="YP_002812821.1"
/db_xref="GI:227812812"
/db_xref="GeneID:7784713"
/translation="MKKEKLRTENISFLYPGAATYALKDVSFSLFEGEWVSVIGQNGS
GKSTLAKLLNGLFLPEAGTITVNDTMILSEETVWDVRKQIGMVFQNPDNQFVGTTVQD
DVVFGLENIGMPREQMVERLNQALRLVRMEDFLNDEPHSLSGGQKQRVAIAGVLALQP
SILILDEATSMLDPQGRREVVETVRQLVNEKGITVLSITHDLEEAAQSDRVIILNKGE
ILEEGTPEQIFKSSHMLQEIGLDVPFSVKIAELLKRNEILLQNTHLTMESLVNELWRL
HSKK"
misc_feature 135630..136469
/gene="cbiO"
/locus_tag="BAMEG_0155"
/note="cobalt transporter ATP-binding subunit;
Provisional; Region: cbiO; PRK13635"
/db_xref="CDD:184195"
misc_feature 135648..136283
/gene="cbiO"
/locus_tag="BAMEG_0155"
/note="Domain I of the ABC component of a cobalt transport
family found in bacteria, archaea, and eukaryota. The
transition metal cobalt is an essential component of many
enzymes and must be transported into cells in appropriate
amounts when needed. This ABC...; Region:
ABC_cobalt_CbiO_domain1; cd03225"
/db_xref="CDD:72984"
misc_feature 135747..135770
/gene="cbiO"
/locus_tag="BAMEG_0155"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72984"
misc_feature order(135756..135761,135765..135773,135894..135896,
136125..136130,136227..136229)
/gene="cbiO"
/locus_tag="BAMEG_0155"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72984"
misc_feature 135885..135896
/gene="cbiO"
/locus_tag="BAMEG_0155"
/note="Q-loop/lid; other site"
/db_xref="CDD:72984"
misc_feature 136053..136082
/gene="cbiO"
/locus_tag="BAMEG_0155"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72984"
misc_feature 136113..136130
/gene="cbiO"
/locus_tag="BAMEG_0155"
/note="Walker B; other site"
/db_xref="CDD:72984"
misc_feature 136137..136148
/gene="cbiO"
/locus_tag="BAMEG_0155"
/note="D-loop; other site"
/db_xref="CDD:72984"
misc_feature 136215..136235
/gene="cbiO"
/locus_tag="BAMEG_0155"
/note="H-loop/switch region; other site"
/db_xref="CDD:72984"
gene 136448..137329
/gene="cbiO"
/locus_tag="BAMEG_0156"
/db_xref="GeneID:7786467"
CDS 136448..137329
/gene="cbiO"
/locus_tag="BAMEG_0156"
/note="with CbiNQ forms the ABC transporter for cobalt
import; Bacillus spp. have two adjacent copies of this
gene"
/codon_start=1
/transl_table=11
/product="cobalt transporter ATP-binding subunit"
/protein_id="YP_002812822.1"
/db_xref="GI:227812813"
/db_xref="GeneID:7786467"
/translation="MEITFQKVEHRYQYKTPFERRALYDVDVSFPSGGYYAIIGHTGS
GKSTMIQHLNGLLQPTNGTVQIGEHFISAGKKEKKLKPLRKKVGVVFQFPEHQLFEET
VEKDICFGPTNFGVSEEAAKQKAREAIELVGLEPELLARSPFELSGGQMRRVAIAGVL
AMEPEVLVLDEPTAGLDPKGQNELMEMFYKLHKEKGLTVILVTHNMEDAAKYAEQIVV
MHKGTVFLQGSAEEVFSHADELEKIGVDLPMSLKYKRAIEEKFGISIPKATLSLEDLT
HEVVQVLRKGGHESCSS"
misc_feature 136448..137317
/gene="cbiO"
/locus_tag="BAMEG_0156"
/note="cobalt transporter ATP-binding subunit;
Provisional; Region: cbiO; PRK13634"
/db_xref="CDD:184194"
misc_feature 136478..137116
/gene="cbiO"
/locus_tag="BAMEG_0156"
/note="First domain of the ATP-binding cassette component
of cobalt transport system; Region:
ABC_cobalt_CbiO_domain1; cd03225"
/db_xref="CDD:213192"
misc_feature 136565..136588
/gene="cbiO"
/locus_tag="BAMEG_0156"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213192"
misc_feature order(136574..136579,136583..136591,136721..136723,
136955..136960,137057..137059)
/gene="cbiO"
/locus_tag="BAMEG_0156"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213192"
misc_feature 136712..136723
/gene="cbiO"
/locus_tag="BAMEG_0156"
/note="Q-loop/lid; other site"
/db_xref="CDD:213192"
misc_feature 136883..136912
/gene="cbiO"
/locus_tag="BAMEG_0156"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213192"
misc_feature 136943..136960
/gene="cbiO"
/locus_tag="BAMEG_0156"
/note="Walker B; other site"
/db_xref="CDD:213192"
misc_feature 136967..136978
/gene="cbiO"
/locus_tag="BAMEG_0156"
/note="D-loop; other site"
/db_xref="CDD:213192"
misc_feature 137045..137065
/gene="cbiO"
/locus_tag="BAMEG_0156"
/note="H-loop/switch region; other site"
/db_xref="CDD:213192"
gene 137317..138111
/locus_tag="BAMEG_0157"
/db_xref="GeneID:7782251"
CDS 137317..138111
/locus_tag="BAMEG_0157"
/note="identified by match to protein family HMM PF02361"
/codon_start=1
/transl_table=11
/product="cobalt transport protein"
/protein_id="YP_002812823.1"
/db_xref="GI:227812814"
/db_xref="GeneID:7782251"
/translation="MQQLIIGRYIPGNSLIHQLDPRTKLLIVFLYVFVVFLANNAISY
GFLFLYALIALFFAKVPIRYVLSGLKPILWIFLFTFFLHIFTNKEGEVLFQLGWFSIH
EKGLEQGIYISIRFFVIILMTTLLTLTTTPIEITDGLETLLKPLKRIKVPVHEIALMM
SISLRFIPTLMDETSKIMKAQSSRGIDFAGGPIKDRMKAIISLLVPLFISAFKRAEDL
AIAMEARGYQSGEGRTKFRQLRWKTSDTVTIISLLCLACILAWVRS"
misc_feature 137326..138060
/locus_tag="BAMEG_0157"
/note="ABC-type cobalt transport system, permease
component CbiQ and related transporters [Inorganic ion
transport and metabolism]; Region: CbiQ; COG0619"
/db_xref="CDD:30964"
gene 138111..138869
/gene="truA"
/locus_tag="BAMEG_0158"
/db_xref="GeneID:7784199"
CDS 138111..138869
/gene="truA"
/locus_tag="BAMEG_0158"
/EC_number="5.4.99.12"
/note="mediates pseudouridylation (positions 38, 39, 40)
at the tRNA anticodon region which contributes to the
structural stability"
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine synthase A"
/protein_id="YP_002812824.1"
/db_xref="GI:227812815"
/db_xref="GeneID:7784199"
/translation="MENREMDRIKCTVAYDGMHFCGYQIQPQHRTVQQEIEKALQKLH
KGELVRVQASGRTDSTVHAKGQVIHFDTPLSLEEWQWSNALNTMLPDDIVITQVEKKT
EEFHARYGVERKEYRYRVLVSKTADVFRRNYVYQYPYPLEVNSIRKAIPYFIGTHDFT
SFCSAKTDKKDKVRTIYEIELIEQDDELIFRFVGNGFLYNMVRIIVGTLLNVGQGKLD
PDSIPEILAKQNRQFAGKMAPGHGLYLWQVNYNN"
misc_feature 138126..138860
/gene="truA"
/locus_tag="BAMEG_0158"
/note="tRNA pseudouridine synthase A; Validated; Region:
truA; PRK00021"
/db_xref="CDD:178798"
misc_feature 138141..138860
/gene="truA"
/locus_tag="BAMEG_0158"
/note="Eukaryotic and bacterial pseudouridine synthases
similar to E. coli TruA; Region: PseudoU_synth_EcTruA;
cd02570"
/db_xref="CDD:211337"
misc_feature order(138150..138152,138366..138368,138375..138398)
/gene="truA"
/locus_tag="BAMEG_0158"
/note="dimerization interface 3.5A [polypeptide binding];
other site"
/db_xref="CDD:211337"
misc_feature order(138273..138284,138717..138719)
/gene="truA"
/locus_tag="BAMEG_0158"
/note="active site"
/db_xref="CDD:211337"
misc_feature 138924..138984
/note="Ribosomal protein L13 leader"
gene 139022..139459
/gene="rplM"
/locus_tag="BAMEG_0160"
/db_xref="GeneID:7786323"
CDS 139022..139459
/gene="rplM"
/locus_tag="BAMEG_0160"
/note="in Escherichia coli this protein is one of the
earliest assembly proteins in the large subunit"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L13"
/protein_id="YP_002812825.1"
/db_xref="GI:227812816"
/db_xref="GeneID:7786323"
/translation="MRTTFMAKANEVERKWYVVDAEGQTLGRLASEVASILRGKNKPT
FTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQML
ELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKPEVYELRG"
misc_feature 139067..139408
/gene="rplM"
/locus_tag="BAMEG_0160"
/note="Ribosomal protein L13. Protein L13, a large
ribosomal subunit protein, is one of five proteins
required for an early folding intermediate of 23S rRNA in
the assembly of the large subunit. L13 is situated on the
bottom of the large subunit, near the...; Region:
Ribosomal_L13; cd00392"
/db_xref="CDD:88313"
misc_feature order(139094..139096,139100..139105,139112..139114,
139121..139123,139133..139135,139217..139219,
139223..139225,139307..139312,139328..139336,
139340..139348,139352..139360,139364..139366,
139370..139372,139382..139384,139391..139396)
/gene="rplM"
/locus_tag="BAMEG_0160"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88313"
misc_feature 139310..139312
/gene="rplM"
/locus_tag="BAMEG_0160"
/note="L3 interface [polypeptide binding]; other site"
/db_xref="CDD:88313"
gene 139481..139873
/gene="rpsI"
/locus_tag="BAMEG_0161"
/db_xref="GeneID:7786698"
CDS 139481..139873
/gene="rpsI"
/locus_tag="BAMEG_0161"
/note="forms a direct contact with the tRNA during
translation"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S9"
/protein_id="YP_002812826.1"
/db_xref="GI:227812817"
/db_xref="GeneID:7786698"
/translation="MAQVQYYGTGRRKSSVARVRLVSGEGRVIINGRDFENYIPFAAL
REVVKQPLVATETLGNYDVLVNVNGGGYTGQAGAIRHGISRALLKADPEYRLTLKRAG
LLTRDARMKERKKYGLKGARRAPQFSKR"
misc_feature 139481..139870
/gene="rpsI"
/locus_tag="BAMEG_0161"
/note="30S ribosomal protein S9; Reviewed; Region: rpsI;
PRK00132"
/db_xref="CDD:178888"
gene 140036..140464
/locus_tag="BAMEG_0162"
/db_xref="GeneID:7781997"
CDS 140036..140464
/locus_tag="BAMEG_0162"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812827.1"
/db_xref="GI:227812818"
/db_xref="GeneID:7781997"
/translation="MNVIVSLQEKQKEKQLKYERKMLRELSLKTLRSNIRDAFQMQEL
HRQYEDYCIELGIESYLLGARYSKFGYYGESFFDVKYRALEEEQQLTETLFQFLTSMT
MREIKLQDEELLFESCQQFIGLWWQEGYEKGERRYRLKLH"
misc_feature 140036..140461
/locus_tag="BAMEG_0162"
/note="Protein of unknown function (DUF2521); Region:
DUF2521; pfam10730"
/db_xref="CDD:151215"
gene 140531..141244
/gene="cwlD"
/locus_tag="BAMEG_0163"
/db_xref="GeneID:7783128"
CDS 140531..141244
/gene="cwlD"
/locus_tag="BAMEG_0163"
/EC_number="3.5.1.28"
/note="identified by match to protein family HMM PF01520;
match to protein family HMM TIGR02883"
/codon_start=1
/transl_table=11
/product="germination-specific N-acetylmuramoyl-L-alanine
amidase"
/protein_id="YP_002812828.1"
/db_xref="GI:227812819"
/db_xref="GeneID:7783128"
/translation="MKRIRIISFALAAVILFFLVKQEFQIIKSWRAWNLPLSGKVIVL
DAGHGGPDGGAVGGKDIVEKDITLEITKKVQDYLQEQGALVILTREGDYDLAQKDTKS
YSRRKAEDLKKRVEIINKPDVDFFASIHLNALTSSGSKGAQTFYYRSSIENERAAKFI
QAELRTSLENTNRSAKTISHVYLLKYAKTPGALIEAGFLSNVNERYMLNSEKYQQKVA
AAVYRGILRYFTEKGNPPE"
misc_feature 140636..141220
/gene="cwlD"
/locus_tag="BAMEG_0163"
/note="N-acetylmuramoyl-L-alanine amidase [Cell envelope
biogenesis, outer membrane]; Region: AmiC; COG0860"
/db_xref="CDD:31201"
misc_feature 140651..141208
/gene="cwlD"
/locus_tag="BAMEG_0163"
/note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA
(also known as peptidoglycan aminohydrolase, NAMLA
amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC
3.5.1.28) is an autolysin that hydrolyzes the amide bond
between N-acetylmuramoyl and L-amino...; Region:
MurNAc-LAA; cd02696"
/db_xref="CDD:119407"
misc_feature order(140672..140674,140717..140719,140918..140920,
141113..141115)
/gene="cwlD"
/locus_tag="BAMEG_0163"
/note="active site"
/db_xref="CDD:119407"
misc_feature order(140672..140674,140717..140719,140918..140920)
/gene="cwlD"
/locus_tag="BAMEG_0163"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:119407"
gene 141389..142453
/locus_tag="BAMEG_0164"
/db_xref="GeneID:7785309"
CDS 141389..142453
/locus_tag="BAMEG_0164"
/note="identified by match to protein family HMM PF01883"
/codon_start=1
/transl_table=11
/product="mrp protein"
/protein_id="YP_002812829.1"
/db_xref="GI:227812820"
/db_xref="GeneID:7785309"
/translation="MVMKEQVVEALEGIVDPFLHKTLKETGAIKEVTVKPEKKHVSVK
IAIVKTGTAEQMQLQSGIVKLVKELGAATVGLRFAEFTEEELAQFAPEQEEQTESLLS
PNSKTTFLAVASGKGGVGKSTVSVNLAIALARLGKKVGIIDADIYGFSVPDMMGIEKR
PVVRGDKIIPVERLGVKVISMGFFVEDNAPVIWRGPMLGKMLNHFFTEVEWGDLDYLV
LDLPPGTGDVALDLHSMLPACKEIIVTTPHPTAAFVAARAGAMALRTEHSILGVVENM
AYFESKTTGEKEYVFGRGGGDKLATELQTEVLGRIPLQQPDWNKEDFAPSVYEDTHTT
GLIYRTIAETVIDKTAFAQK"
misc_feature 141398..>141565
/locus_tag="BAMEG_0164"
/note="Domain of unknown function DUF59; Region: DUF59;
pfam01883"
/db_xref="CDD:202026"
misc_feature 141767..142333
/locus_tag="BAMEG_0164"
/note="MRP (Multiple Resistance and pH adaptation) is a
homologue of the Fer4_NifH superfamily. Like the other
members of the superfamily, MRP contains a ATP-binding
domain at the N-termini. It is found in bacteria as a
membrane-spanning protein and functions...; Region:
MRP-like; cd02037"
/db_xref="CDD:73300"
gene complement(142510..143127)
/gene="gerD"
/locus_tag="BAMEG_0165"
/db_xref="GeneID:7786612"
CDS complement(142510..143127)
/gene="gerD"
/locus_tag="BAMEG_0165"
/codon_start=1
/transl_table=11
/product="spore germination protein GerD"
/protein_id="YP_002812830.1"
/db_xref="GI:227812821"
/db_xref="GeneID:7786612"
/translation="MKRMLLVLTSSFLFLVLVACAQEKEAKSELDYDQTKKMIVDILK
TDQGKKAIQDVLTDEKMKQALILDETVVKKTIEDAMVSDKGQQFWEKLFKDPEFSSKF
AKSMGKEQTALMKTLLKDPEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTET
AESPLFQAKMIDIISKGVQKAEKSGSDKKEAGGEGGSQEGKKEQQ"
gene 143267..143878
/gene="kbaA"
/locus_tag="BAMEG_0166"
/db_xref="GeneID:7785236"
CDS 143267..143878
/gene="kbaA"
/locus_tag="BAMEG_0166"
/codon_start=1
/transl_table=11
/product="kinb signaling pathway activation protein"
/protein_id="YP_002812831.1"
/db_xref="GI:227812822"
/db_xref="GeneID:7785236"
/translation="MNSRKWVRLFFTTLFLGGISTVIIGFVLEWDKYAKFFQNFDGKE
ILAVSFWLMGVGFIFSVISQMGFFAYLTIHRFGLGMFRSSSLWNIVQLFFIAFVLFDF
VYLRSVLIANGEVSLGNNILVAGVLFMFGAIVAYIKSKETNKKAFVPALFFMVVVTIL
EWVPALRINDTDWLYLMVIPLLLCNAYQLLILHRLIGKTSKSA"
misc_feature 143315..143854
/gene="kbaA"
/locus_tag="BAMEG_0166"
/note="KinB-signalling pathway activation in sporulation;
Region: KbaA; pfam14089"
/db_xref="CDD:206259"
gene complement(143983..144747)
/locus_tag="BAMEG_0167"
/db_xref="GeneID:7783887"
CDS complement(143983..144747)
/locus_tag="BAMEG_0167"
/note="identified by match to protein family HMM PF01522;
match to protein family HMM TIGR02764"
/codon_start=1
/transl_table=11
/product="putative polysaccharide deacetylase"
/protein_id="YP_002812832.1"
/db_xref="GI:227812823"
/db_xref="GeneID:7783887"
/translation="MFFFFITSKRNFKHISLIVILSLFTAWLLFLKTYSHESAFSTAT
GPKVIYKGDTSKKQVAFTFDISWGDKKAIPILDTLKERDIKNATFFLSAAWAERHPDV
VERIIKDGHEIGSMGYNYTSYTSLETNEIRRDLLRAQDVFTKLGVKQIKLLRPPSGDF
NKATLKIAESLGYTVVHWSNNSNDWKNPGVNKIVSTVSNNLKGGDIVLLHASDSALQT
NKALPLLLQKLKSDGYEQISVSQLISNTSTKSKDVQ"
misc_feature complement(143992..>144603)
/locus_tag="BAMEG_0167"
/note="Predicted xylanase/chitin deacetylase [Carbohydrate
transport and metabolism]; Region: CDA1; COG0726"
/db_xref="CDD:31070"
misc_feature complement(144013..144588)
/locus_tag="BAMEG_0167"
/note="Putative catalytic NodB homology domain of Bacillus
subtilis putative polysaccharide deacetylase PdaB, and its
bacterial homologs; Region: CE4_BsPdaB_like; cd10949"
/db_xref="CDD:200573"
misc_feature complement(order(144118..144120,144124..144126,
144193..144198,144214..144216,144277..144282,
144286..144288,144385..144402,144553..144564))
/locus_tag="BAMEG_0167"
/note="NodB motif; other site"
/db_xref="CDD:200573"
misc_feature complement(order(144118..144120,144124..144126,
144214..144216,144274..144282,144388..144390,
144400..144402,144553..144558))
/locus_tag="BAMEG_0167"
/note="putative active site [active]"
/db_xref="CDD:200573"
misc_feature complement(order(144118..144120,144196..144198,
144286..144288,144556..144558))
/locus_tag="BAMEG_0167"
/note="putative catalytic site [active]"
/db_xref="CDD:200573"
gene 144918..145136
/locus_tag="BAMEG_0168"
/db_xref="GeneID:7784489"
CDS 144918..145136
/locus_tag="BAMEG_0168"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812833.1"
/db_xref="GI:227812824"
/db_xref="GeneID:7784489"
/translation="MLGFMLTKEEKKEMEYILKRELEELLFDFEDERIHDVVKKAMEE
RYKIIFCLFRRVANAEDCIRYVRKRTFY"
gene 145386..146894
/gene="rrs_4"
/locus_tag="BAMEG_0169"
/db_xref="GeneID:7783522"
rRNA 145386..146894
/gene="rrs_4"
/locus_tag="BAMEG_0169"
/product="16S ribosomal RNA"
/db_xref="GeneID:7783522"
gene 147073..149980
/gene="rrl_4"
/locus_tag="BAMEG_0171"
/db_xref="GeneID:7785663"
rRNA 147073..149980
/gene="rrl_4"
/locus_tag="BAMEG_0171"
/product="23S ribosomal RNA"
/db_xref="GeneID:7785663"
gene 150067..150182
/gene="rrf_4"
/locus_tag="BAMEG_0172"
/db_xref="GeneID:7785665"
rRNA 150067..150182
/gene="rrf_4"
/locus_tag="BAMEG_0172"
/product="5S ribosomal RNA"
/db_xref="GeneID:7785665"
gene 150191..150267
/locus_tag="BAMEG_0173"
/db_xref="GeneID:7785648"
tRNA 150191..150267
/locus_tag="BAMEG_0173"
/product="tRNA-Asn"
/db_xref="GeneID:7785648"
gene 150271..150346
/locus_tag="BAMEG_0174"
/db_xref="GeneID:7785751"
tRNA 150271..150346
/locus_tag="BAMEG_0174"
/product="tRNA-Thr"
/db_xref="GeneID:7785751"
gene 150367..150443
/locus_tag="BAMEG_0175"
/db_xref="GeneID:7785723"
tRNA 150367..150443
/locus_tag="BAMEG_0175"
/product="tRNA-Glu"
/db_xref="GeneID:7785723"
gene 150447..150524
/locus_tag="BAMEG_0176"
/db_xref="GeneID:7785711"
tRNA 150447..150524
/locus_tag="BAMEG_0176"
/product="tRNA-Val"
/db_xref="GeneID:7785711"
gene 150541..150624
/locus_tag="BAMEG_0177"
/db_xref="GeneID:7785700"
tRNA 150541..150624
/locus_tag="BAMEG_0177"
/product="tRNA-Tyr"
/db_xref="GeneID:7785700"
gene 150690..150764
/locus_tag="BAMEG_0178"
/db_xref="GeneID:7785710"
tRNA 150690..150764
/locus_tag="BAMEG_0178"
/product="tRNA-Gln"
/db_xref="GeneID:7785710"
gene 150770..150845
/locus_tag="BAMEG_0179"
/db_xref="GeneID:7785693"
tRNA 150770..150845
/locus_tag="BAMEG_0179"
/product="tRNA-Lys"
/db_xref="GeneID:7785693"
gene 150851..150925
/locus_tag="BAMEG_0180"
/db_xref="GeneID:7785734"
tRNA 150851..150925
/locus_tag="BAMEG_0180"
/product="tRNA-Gly"
/db_xref="GeneID:7785734"
gene 150933..151008
/locus_tag="BAMEG_0181"
/db_xref="GeneID:7785705"
tRNA 150933..151008
/locus_tag="BAMEG_0181"
/product="tRNA-Ala"
/db_xref="GeneID:7785705"
gene 151120..151329
/locus_tag="BAMEG_0182"
/db_xref="GeneID:7785679"
CDS 151120..151329
/locus_tag="BAMEG_0182"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="glycerate kinase"
/protein_id="YP_002812834.1"
/db_xref="GI:227812825"
/db_xref="GeneID:7785679"
/translation="MKVVIASDSYKESLKAIEVCEAIERGFEAIFPKAEYVKIPIGDG
GEGTVDSLVDAARGENYITSCNRAA"
misc_feature 151120..>151302
/locus_tag="BAMEG_0182"
/note="Glycerate kinase family; Region: Gly_kinase;
cl00841"
/db_xref="CDD:186217"
gene 151280..152266
/locus_tag="BAMEG_0183"
/db_xref="GeneID:7781960"
CDS 151280..152266
/locus_tag="BAMEG_0183"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift; identified by match to protein family HMM
PF02595; match to protein family HMM TIGR00045"
/codon_start=1
/transl_table=11
/product="glycerate kinase"
/protein_id="YP_002812835.1"
/db_xref="GI:227812826"
/db_xref="GeneID:7781960"
/translation="MPQGGRIISLHVTGPLRERVQAFYGMSKDKKTAFIEMAAASGLQ
HVPVKKRNPLVTTTKGTGELILHALDEGAEHIILGLGGSATNDGGAGMLSALGVRFIN
GKGEVIDPFGGTLHSIVSIDFSQMDSRLKHIKIEAACDVDNPLVGIRGASFVFGRQKG
ADEEMMKELDENLKHYAHILKQYLYCDVSKIPGAGAAGGMGAAVIAVLKGNLRRGIEI
VLDYTNFDKHIEGADLIITGEGRIDEQTAYGKAPVGVAERAKHFHIPVIAIGGSVSPN
YTAVHEKGIDAVFSITPSPMTLEEAYKVAEENIEMTAKNIAAVWKIASEKHF"
misc_feature 151289..152248
/locus_tag="BAMEG_0183"
/note="glycerate kinase; Region: TIGR00045"
/db_xref="CDD:161679"
gene 152476..153369
/gene="rocF"
/locus_tag="BAMEG_0184"
/db_xref="GeneID:7786943"
CDS 152476..153369
/gene="rocF"
/locus_tag="BAMEG_0184"
/EC_number="3.5.3.1"
/note="identified by match to protein family HMM PF00491;
match to protein family HMM TIGR01229"
/codon_start=1
/transl_table=11
/product="arginase"
/protein_id="YP_002812836.1"
/db_xref="GI:227812827"
/db_xref="GeneID:7786943"
/translation="MKKEISVIGVPMDLGQMRRGVDMGPSAIRYAGVIERIEEIGYDV
KDMGDICIEREKEVDVNTSLRNLTQVATVCNELASKVDHIIEEGRFPLVLGGDHSIAI
GTLAGVAKHYKNLGVIWYDAHGDLNTEETSPSGNIHGMSLAASLGYGHPTLVDLYGAY
PKVKKENVVIIGARALDEGEKDFIRNEGIKVFTMHEIDRMGMTAVMEETIEYLSHTDG
VHLSLDLDGLDPHDAPGVGTPVIGGLSYRESHLAMEMLAEADIVTSAEFVEVNMILDE
RNRTATTAVALMGSLFGEKLK"
misc_feature 152488..153348
/gene="rocF"
/locus_tag="BAMEG_0184"
/note="Arginase family; Region: Arginase; cd09989"
/db_xref="CDD:212515"
misc_feature order(152767..152769,152836..152838,152842..152844,
152848..152850,152854..152856,152887..152892,
153004..153006,153013..153015,153145..153147,
153151..153153,153280..153282)
/gene="rocF"
/locus_tag="BAMEG_0184"
/note="active site"
/db_xref="CDD:212515"
misc_feature order(152767..152769,152836..152838,152842..152844,
152848..152850,153145..153147,153151..153153)
/gene="rocF"
/locus_tag="BAMEG_0184"
/note="Mn binding site [ion binding]; other site"
/db_xref="CDD:212515"
misc_feature order(152995..152997,153001..153003,153016..153018,
153025..153030,153052..153060,153064..153075,
153082..153087,153094..153096,153196..153219,
153235..153237)
/gene="rocF"
/locus_tag="BAMEG_0184"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:212515"
gene 153618..154439
/locus_tag="BAMEG_0185"
/db_xref="GeneID:7784273"
CDS 153618..154439
/locus_tag="BAMEG_0185"
/note="identified by match to protein family HMM PF02457;
match to protein family HMM TIGR00159"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812837.1"
/db_xref="GI:227812828"
/db_xref="GeneID:7784273"
/translation="MPFEDTTILKYLSTALDIAVVWFIIYKLILIIRGTKAVQLLKGI
TVIIVVRMISIFLELRTLYWLTEQVLTWGFLAVIIIFQPELRRALEQLGRGSLFSRTG
THEDDEPEMVATAIAKATEYMGKRRIGALITLSKETGMGDYVETGIPLNANVSSELLI
NIFIPNTPLHDGAVIMQGSTIKAAACYLPLSESPFISKELGTRHRAAMGVSEVTDSIT
VVVSEETGQISLTKNGKLHRDLKTEQLKDMLLAEFSANEKTTSSSLWNWRRKRHG"
misc_feature 153618..154352
/locus_tag="BAMEG_0185"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1624"
/db_xref="CDD:31811"
misc_feature 153963..154328
/locus_tag="BAMEG_0185"
/note="DisA bacterial checkpoint controller
nucleotide-binding; Region: DisA_N; pfam02457"
/db_xref="CDD:190315"
gene 154432..155922
/locus_tag="BAMEG_0186"
/db_xref="GeneID:7784928"
CDS 154432..155922
/locus_tag="BAMEG_0186"
/note="identified by match to protein family HMM PF07949"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812838.1"
/db_xref="GI:227812829"
/db_xref="GeneID:7784928"
/translation="MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDA
KETLTNYAINVKYDEEKYIVSGIPAEGVKVKLEGPKAAVATAKAKKQFDIPVDLRDSE
KGTYEVSLKTNGLPDDVKGTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEK
SSLKPDTVEVVGTKEEIESISSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSP
SKISVTLNVATQATANNTEKTVPIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILD
NIQSIEGVEVDLSQLTESTTFDTSVLLPKGVTSAKPNQVKVSVGVQKTKQTKTRTIDG
ISIQKNGLSKDVTAQLLSPQDGKISVDISGETSIVDKIIANQITAVINLQNVSPGTKD
VAIQVSGPSNISIEPKQKSAKVTIVKKENPDKEVQGNGEQPNSNNNQDNQDNQTEKPK
NPEPEPNPDPYPEKEKEPEQNKDKETSQEPTVDNQKEPEKGANHNG"
misc_feature 154432..155685
/locus_tag="BAMEG_0186"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4856"
/db_xref="CDD:34465"
misc_feature 154585..154827
/locus_tag="BAMEG_0186"
/note="YbbR-like protein; Region: YbbR; pfam07949"
/db_xref="CDD:203816"
misc_feature 154855..155106
/locus_tag="BAMEG_0186"
/note="YbbR-like protein; Region: YbbR; pfam07949"
/db_xref="CDD:203816"
misc_feature 155149..155388
/locus_tag="BAMEG_0186"
/note="YbbR-like protein; Region: YbbR; pfam07949"
/db_xref="CDD:203816"
gene 155915..157261
/gene="glmM"
/locus_tag="BAMEG_0187"
/db_xref="GeneID:7782803"
CDS 155915..157261
/gene="glmM"
/locus_tag="BAMEG_0187"
/EC_number="5.4.2.10"
/note="catalyzes the conversion of glucosamine-6-phosphate
to glucosamine-1-phosphate"
/codon_start=1
/transl_table=11
/product="phosphoglucosamine mutase"
/protein_id="YP_002812839.1"
/db_xref="GI:227812830"
/db_xref="GeneID:7782803"
/translation="MGKYFGTDGVRGVANKELTPELAFKIGRFGGYVLTKDTDRPKVI
IGRDTRISGHMLEGALVAGLLSTGAEVMRLGVISTPGVAYLTKALDAQAGVMISASHN
PVQDNGIKFFGSDGFKLTDEQEAEIEALLDKEVDELPRPTGTNLGQVSDYFEGGQKYL
QYIKQTVEEDFSGLHIALDCAHGATSSLAPYLFADLEADISTMGTSPNGMNINDGVGS
THPEVLAELVKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQIMFICAKYMKETGQLK
HNTVVSTVMSNLGFYKALEANGITSDKTAVGDRYVMEEMKRGGYNLGGEQSGHIILLD
YITTGDGMLSALQLVNIMKMTKKPLSELAGEMTKFPQLLVNVRVTDKKLALENEKIKE
IIRVVEEEMNGDGRILVRPSGTEPLIRVMAEAPTQEVCDAYVHRIVEVVKAEVGAE"
misc_feature 155918..157258
/gene="glmM"
/locus_tag="BAMEG_0187"
/note="phosphoglucosamine mutase; Provisional; Region:
glmM; PRK14316"
/db_xref="CDD:184616"
misc_feature 155924..157228
/gene="glmM"
/locus_tag="BAMEG_0187"
/note="GlmM is a bacterial phosphoglucosamine mutase
(PNGM) that belongs to the alpha-D-phosphohexomutase
superfamily. It is required for the interconversion of
glucosamine-6-phosphate and glucosamine-1-phosphate in the
biosynthetic pathway of...; Region: GlmM; cd05802"
/db_xref="CDD:100095"
misc_feature order(155930..155932,155936..155938,155945..155947,
156212..156220,156242..156244,156632..156634,
156638..156640,156644..156649,156767..156769,
156830..156838,156887..156889,156893..156895,
156899..156901,157142..157144,157148..157156,
157169..157171)
/gene="glmM"
/locus_tag="BAMEG_0187"
/note="active site"
/db_xref="CDD:100095"
misc_feature order(155936..155938,156212..156214,156647..156649,
156767..156769,156830..156832,156836..156838,
156887..156889,156893..156895,156899..156901,
157142..157144,157148..157156,157169..157171)
/gene="glmM"
/locus_tag="BAMEG_0187"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100095"
misc_feature order(156212..156214,156632..156634,156638..156640,
156644..156646)
/gene="glmM"
/locus_tag="BAMEG_0187"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:100095"
gene 157400..157555
/locus_tag="BAMEG_0188"
/db_xref="GeneID:7782759"
ncRNA 157400..157555
/locus_tag="BAMEG_0188"
/ncRNA_class="ribozyme"
/product="glmS glucosamine-6-phosphate activated ribozyme"
/db_xref="GeneID:7782759"
gene 157747..159549
/gene="glmS"
/locus_tag="BAMEG_0189"
/db_xref="GeneID:7785666"
CDS 157747..159549
/gene="glmS"
/locus_tag="BAMEG_0189"
/EC_number="2.6.1.16"
/note="Catalyzes the first step in hexosamine metabolism,
converting fructose-6P into glucosamine-6P using glutamine
as a nitrogen source"
/codon_start=1
/transl_table=11
/product="glucosamine--fructose-6-phosphate
aminotransferase"
/protein_id="YP_002812840.1"
/db_xref="GI:227812831"
/db_xref="GeneID:7785666"
/translation="MCGIVGFIGEQDAKEILLKGLEKLEYRGYDSAGIAVQAENGVVV
YKEKGRIAKLREIVDENVAASVGIGHTRWATHGVPSKVNAHPHQSTSKRFTLVHNGVI
ENYELVKKEYLQDVTFVSETDTEVIVQLMEQQVSTGLSVEEAFRNTLSLLHGSYAIGL
LDAENPNMIYVAKNKSPLLVGVGDNFNVVASDAMAMLQVTDQFIELMDKEIVIVMKES
ITIKNLQGETIERAPFTAELDASDIEKGTYPHFMLKEIDEQPLVIRNIIQKYQDENGE
IELDQDIRNAILDSDRIYIIACGTSYHAGLVGKQFIEKFAKMPVEVHVASEFSYNMPL
LTERPFFIYISQSGETADSRAVLVQTNEMGHKALTITNVPGSTLSREADYTLPLYAGP
EIAVASTKAYTAQLAVLSILAADIAKAKGEVLGFDLTHELGLVANAMIELCDQKEEMD
ALAKQFLATTRNCFFIGRSVDFYVGLEGALKLKEISYIQAEGFAGGELKHGTIALIEN
GTPVIALATQEHVNLGIRGNVKEVVARGANPCIISMKGLEMEGDSFVLPAVHEALAPL
VAVIPLQLISYYAALHRECDVDKPRNLAKSVTVE"
misc_feature 157747..159546
/gene="glmS"
/locus_tag="BAMEG_0189"
/note="glucosamine--fructose-6-phosphate aminotransferase;
Reviewed; Region: PRK00331"
/db_xref="CDD:178980"
misc_feature 157750..158388
/gene="glmS"
/locus_tag="BAMEG_0189"
/note="Glutamine amidotransferases class-II
(Gn-AT)_GFAT-type. This domain is found at the N-terminus
of glucosamine-6P synthase (GlmS, or GFAT in humans). The
glutaminase domain catalyzes amide nitrogen transfer from
glutamine to the appropriate substrate. In...; Region:
GFAT; cd00714"
/db_xref="CDD:48478"
misc_feature order(157750..157752,157825..157827,157960..157965,
157969..157974,157999..158001,158041..158046,
158113..158118)
/gene="glmS"
/locus_tag="BAMEG_0189"
/note="glutaminase active site [active]"
/db_xref="CDD:48478"
misc_feature 158620..158997
/gene="glmS"
/locus_tag="BAMEG_0189"
/note="SIS (Sugar ISomerase) domain repeat 1 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_1; cd05008"
/db_xref="CDD:88405"
misc_feature order(158638..158643,158671..158676,158683..158688,
158707..158709,158713..158715,158725..158727,
158734..158736,158800..158802)
/gene="glmS"
/locus_tag="BAMEG_0189"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88405"
misc_feature order(158644..158649,158779..158787)
/gene="glmS"
/locus_tag="BAMEG_0189"
/note="active site"
/db_xref="CDD:88405"
misc_feature 159085..159540
/gene="glmS"
/locus_tag="BAMEG_0189"
/note="SIS (Sugar ISomerase) domain repeat 2 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_2; cd05009"
/db_xref="CDD:88406"
misc_feature order(159151..159153,159193..159195,159205..159207,
159211..159213,159217..159219,159223..159225,
159235..159237,159241..159249,159253..159264,
159313..159318,159328..159330,159334..159339,
159517..159522,159535..159537)
/gene="glmS"
/locus_tag="BAMEG_0189"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88406"
misc_feature order(159187..159189,159196..159198)
/gene="glmS"
/locus_tag="BAMEG_0189"
/note="active site"
/db_xref="CDD:88406"
gene 159913..160722
/locus_tag="BAMEG_0190"
/db_xref="GeneID:7782309"
CDS 159913..160722
/locus_tag="BAMEG_0190"
/note="identified by match to protein family HMM PF00561"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812841.1"
/db_xref="GI:227812832"
/db_xref="GeneID:7782309"
/translation="MSIVKNGTLQVIGASIYYEVRGSGPILLLIHGGGGDADKFHNIA
DHLAKWYTVVTYDRRGHSRSNLVNKNEDYHVHTHSEDAHRLLANLTKEPAYVFGSSSG
AVIGLDLCIRHPEQVQLLIPHEPVLLQLLSENELKQAINFLEDLKGNHQNEVMKLLSN
IDDSNSEPSKDMLTERLLGNSTYFTEYEIPGILSYTLNIDALKSLLKPASIQVRPAGG
SISRETFPYHCAFNLAEHLGTEFAEFPGHHVGYNTVHHKEFAERLHDVIEN"
misc_feature 160030..>160317
/locus_tag="BAMEG_0190"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:205026"
gene 161129..161860
/gene="gntR"
/locus_tag="BAMEG_0191"
/db_xref="GeneID:7785220"
CDS 161129..161860
/gene="gntR"
/locus_tag="BAMEG_0191"
/note="identified by match to protein family HMM PF00392;
match to protein family HMM PF07729"
/codon_start=1
/transl_table=11
/product="gluconate operon transcriptional repressor"
/protein_id="YP_002812842.1"
/db_xref="GI:227812833"
/db_xref="GeneID:7785220"
/translation="MTKSMEFLYPEKWLSKASTGDRVASELRMRIIAGVIESGTILSE
NKIAADFSVSRSPVREALKLLVSENIIRLERMGAVVIGLTEKEIEEIYDVRLLIETFI
FERLGKMDTNDLVRELNKIMEMMKIAIKYHDSDEFSYQDLLFHETIIRTIEHSYILMI
WNNLKPVMESLILLSMRTRFKEKYEDFERIIKNHELYIKAIESKDRALMIEALHQNFD
DVQGKVEDLWMSQQMLSKGVEQGHE"
misc_feature 161150..161812
/gene="gntR"
/locus_tag="BAMEG_0191"
/note="Transcriptional regulators [Transcription]; Region:
GntR; COG1802"
/db_xref="CDD:31987"
misc_feature 161189..161368
/gene="gntR"
/locus_tag="BAMEG_0191"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature order(161258..161263,161285..161299,161303..161308,
161315..161317,161342..161347,161351..161362)
/gene="gntR"
/locus_tag="BAMEG_0191"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature 161396..161785
/gene="gntR"
/locus_tag="BAMEG_0191"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:203742"
gene 161853..162383
/locus_tag="BAMEG_0192"
/db_xref="GeneID:7786262"
CDS 161853..162383
/locus_tag="BAMEG_0192"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
premature stop; identified by match to protein family HMM
PF00370"
/codon_start=1
/transl_table=11
/product="gluconokinase"
/protein_id="YP_002812843.1"
/db_xref="GI:227812834"
/db_xref="GeneID:7786262"
/translation="MSSYMLGIDIGTTSTKAVLFTEKGEVIQTENIGYPLRTPDISTA
EQDPEEIFQAVLQAISNITKQHSDKKPSFISFSSAMHSVIAMDENDQPLTPCITWADN
RSEAWAHKIKDELNGHAVYRRTGTPIHPMSPLSKITWIVNAHPEIAIRTKKYIGIKEY
IFKKFFDQYVVDHSIA"
misc_feature 161862..>162380
/locus_tag="BAMEG_0192"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:214262"
misc_feature order(161877..161888,161892..161894,161898..161900)
/locus_tag="BAMEG_0192"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
gene 162387..163388
/locus_tag="BAMEG_0193"
/db_xref="GeneID:7784817"
CDS 162387..163388
/locus_tag="BAMEG_0193"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
premature stop; identified by match to protein family HMM
PF02782"
/codon_start=1
/transl_table=11
/product="gluconate kinase"
/protein_id="YP_002812844.1"
/db_xref="GI:227812835"
/db_xref="GeneID:7784817"
/translation="MGMMNLKTLDWDEEALKIAGITSAQLSKLVPTTKIFSNCNPDLA
QKIGIDSQTPFVIGASDGVLSNLGVNAIRKGEIAVTIGTSGAIRTIIDKPQTDKKGRI
FCYALTEKHWVIGGPVNNGGMVLRWIRDELASSEVETAKRLGIDPYDVLTKIAERVRP
GADGLLFHPYLAGERAPLWNPDVRGSFFGLTMSHKKEHMIRAALEGVIYNLYTVFLAL
TECMDGPVTRIQATGGFARSDVWRQMMSDIFASEVVVPKSYESSCLGACILGLYATGK
IDSFEIVSEMVGSTYKHTPKEEATKEYRQLLPIFINLSRALEDDYTRIANYQRNLIK"
misc_feature <162387..163181
/locus_tag="BAMEG_0193"
/note="Gluconate kinases; a subfamily of the FGGY family
of carbohydrate kinases; Region: FGGY_GntK; cd07770"
/db_xref="CDD:212659"
misc_feature order(162405..162407,162411..162413,162570..162590,
162648..162650,162675..162677,162690..162710,
162726..162728,163143..163157,163167..163169,
163173..163175)
/locus_tag="BAMEG_0193"
/note="N- and C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:212659"
misc_feature order(162567..162572,162630..162635,162642..162644,
162648..162650,162693..162695,162699..162701,
162735..162737,162750..162755,162759..162764,
162807..162809,162819..162821,162882..162884,
163056..163064)
/locus_tag="BAMEG_0193"
/note="active site"
/db_xref="CDD:212659"
misc_feature order(162567..162572,162633..162635,162642..162644,
162648..162650,162693..162695,162699..162701,
162735..162737,162882..162884)
/locus_tag="BAMEG_0193"
/note="carbohydrate binding site [chemical binding]; other
site"
/db_xref="CDD:212659"
misc_feature order(162630..162635,162750..162755,162759..162764,
162807..162809,162819..162821,163056..163064)
/locus_tag="BAMEG_0193"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:212659"
gene 163508..164854
/gene="gntP1"
/locus_tag="BAMEG_0194"
/db_xref="GeneID:7782664"
CDS 163508..164854
/gene="gntP1"
/locus_tag="BAMEG_0194"
/note="identified by match to protein family HMM PF02447;
match to protein family HMM PF03600; match to protein
family HMM TIGR00791"
/codon_start=1
/transl_table=11
/product="gluconate permease"
/protein_id="YP_002812845.1"
/db_xref="GI:227812836"
/db_xref="GeneID:7782664"
/translation="MPLVIVAIGILALLLLIMRFKLNTFISLIIVSVGVALALGMPPE
KIFKTIEAGLGGTLGHLALVFGLGAMLGKLLSDSGGAQRIAMTLVKKFGEKNIQWAVV
TASFIIGIALFFEVGLVLLIPIVFAISRELKVSILYLGISMAAALSVTHGFLPPHPGP
TAIAGELHANIGEVLLYGFMIAVPTVVLAGPVFTKLAKKLVPEAFTKTGNIQSLGEQK
VFKLEETPGFGISVFTALLPVLLMAVATIITLLQKTMGFKDNSLLATIEFIGNADTAM
LISLLVAIYTMGLARNIPIKSVMESCTTAISNIGMMLLIIGGGGAFKQVLIDGGVGNY
VAELFKGTSLSPILLAWIIAAILRISLGSATVAALTTVGLVIPMLGQSDVNLALVVLA
TGAGSLIASHVNDAGFWMFKEYFGLSMKETFATWTLLETIVSVAGLGFTLLLSLFV"
misc_feature 163559..164851
/gene="gntP1"
/locus_tag="BAMEG_0194"
/note="Na+-H+ antiporter family; Region: Na_H_antiport_2;
cl15264"
/db_xref="CDD:210060"
misc_feature 163559..164851
/gene="gntP1"
/locus_tag="BAMEG_0194"
/note="gluconate transporter; Region: gntP; TIGR00791"
/db_xref="CDD:129873"
gene 165119..166528
/gene="yqjI"
/locus_tag="BAMEG_0195"
/db_xref="GeneID:7782380"
CDS 165119..166528
/gene="yqjI"
/locus_tag="BAMEG_0195"
/EC_number="1.1.1.44"
/note="catalyzes the formation of D-ribulose 5-phosphate
from 6-phospho-D-gluconate"
/codon_start=1
/transl_table=11
/product="6-phosphogluconate dehydrogenase"
/protein_id="YP_002812846.1"
/db_xref="GI:227812837"
/db_xref="GeneID:7782380"
/translation="MENLQIGVVGVGVMGKSLALNFESKGYSVALYDISKEKVDETIE
ENRGKNLVGTHIVEEFVNSLESPRKILLMVNAGEITDKAIDSLVPHLDKGDILIDGGN
TYFVDTIRRNKRLAEEGINFIGAGVSGGEEGALKGPSIMPGGQKDAYEKVKDMLENIS
AKVNNEPCCSYIGPNGAGHYVKMVHNGIEYGDMQLICEAYFFLKQTLDLTAEEFHEIF
AEWNKGELNSYLIEITADIFKKKDEETGKPLVDVILDTAGQKGTGKWTSQSALDLGIS
LPIITESVFARCISALKEERVNASKVLSGPKDKTAIGVEKAELIEAVRQALYMSKICS
YAQGFTQLKAASEEYNWNLDFGSISMLWRGGCIIRAAFLQNIKEAYETNTDLPNLLLD
PYFKEIVESYQGGLRQIISMAVQQGIPIPAFSAAISYYDSYRTAKLPANLLQAQRDYF
GAHTYKRVDKEGTFHTKWI"
misc_feature 165131..165979
/gene="yqjI"
/locus_tag="BAMEG_0195"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:214164"
misc_feature 165158..166522
/gene="yqjI"
/locus_tag="BAMEG_0195"
/note="6-phosphogluconate dehydrogenase; Validated;
Region: PRK09287"
/db_xref="CDD:181758"
misc_feature 165650..166525
/gene="yqjI"
/locus_tag="BAMEG_0195"
/note="6-phosphogluconate dehydrogenase, C-terminal
domain; Region: 6PGD; pfam00393"
/db_xref="CDD:109451"
gene 166871..168835
/locus_tag="BAMEG_0196"
/db_xref="GeneID:7787531"
CDS 166871..168835
/locus_tag="BAMEG_0196"
/note="identified by match to protein family HMM PF00326;
match to protein family HMM PF07676"
/codon_start=1
/transl_table=11
/product="putative prolyl oligopeptidase family protein"
/protein_id="YP_002812847.1"
/db_xref="GI:227812838"
/db_xref="GeneID:7787531"
/translation="MKVSEKTYLSIEEIISLPTVSSTNISDDGKNVAFVKRTANWEDN
TYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGDGDMKNQIFVKSL
DDYSKVKITDEKEGISNFKWDPTGKGFYYITQSKECEEIKKRKELYGDFQHVGKEHQN
NCLCYIEMEKVIQNDKEEREINGVYQLTGGKDFYIHGFDISDNGKKVVCMATPSLNDH
MNGDLYILDVEARELQQMNVDKLLGGSACFSPEGNKICYSASIREKEYYRNHIQESTL
EIYDMNTGEVIQPLTNFDSMVMPLQWTAKGILIRWQDKTNYFIGLLAEDGTVETLREK
VDGFIMDASITRDGNHITYNKAITNETFEIYLDDKKITNENSLFEGKLKSNREIISWR
SSDGLEIEGVLSTPVEFDANKKYPLLVVIHGGPAWASFPIFSNCFNEKYPIEQFVEKG
FIVLEPNYRGSSGYGNEFLKANYRKQGLADYDDVISGVDELVEKGMVDKDRVGVMGWS
NGGYISAFCSTFSSRFKAISVGGGITNWSTHYVNTDIPYFIRMYLGNTPWNDPDIYKR
TSPMTYIKSACTPTLIQHGEKDARIPITNAYELHQGLKDMEVDTELIIFKGMAYSSDQ
PGVHVAIMKQNLMWFSHYILGESMEDFSTI"
misc_feature 166895..168799
/locus_tag="BAMEG_0196"
/note="Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
[Amino acid transport and metabolism]; Region: DAP2;
COG1506"
/db_xref="CDD:31695"
misc_feature 168206..168808
/locus_tag="BAMEG_0196"
/note="Prolyl oligopeptidase family; Region: Peptidase_S9;
pfam00326"
/db_xref="CDD:201156"
gene 168954..169520
/locus_tag="BAMEG_0197"
/db_xref="GeneID:7782213"
CDS 168954..169520
/locus_tag="BAMEG_0197"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812848.1"
/db_xref="GI:227812839"
/db_xref="GeneID:7782213"
/translation="MTENKNELSVEQREELLKVLQARFEKNMNRHEGLEWAKVETKLA
TNNEKLWTLNEMEVTGGEPDVVGYDEEKDEYTFYDCSKESPKGRRSLCYDLEALESRK
KHKPENNAIDVAAAMGIELLTEQQYRELQKLGDFDMKSSSWVQTPSDIRELGGALFCD
YRFGHVFVYHNGADSYYAARGFRGSLRV"
misc_feature 168999..169517
/locus_tag="BAMEG_0197"
/note="Protein of unknown function (DUF4256); Region:
DUF4256; pfam14066"
/db_xref="CDD:206236"
gene complement(169592..170098)
/locus_tag="BAMEG_0198"
/db_xref="GeneID:7783382"
CDS complement(169592..170098)
/locus_tag="BAMEG_0198"
/note="identified by match to protein family HMM PF04173;
match to protein family HMM PF07681"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812849.1"
/db_xref="GI:227812840"
/db_xref="GeneID:7783382"
/translation="MVINFLRTDKRAAFILLFLRLYIGYTWLAAGIGKVFGQSFDASG
FLKGAIAQASGDHPAVQSWWADFLQHFVLPNADLFSFLVQWGEILVGLGLILGGLTKT
AAFFGIIMNLAFLLSGTVSVNPNLLILTMFILVAGQNAGRIGLDGYVFPKLFRKNSHG
TYKLSKTA"
misc_feature complement(169640..170065)
/locus_tag="BAMEG_0198"
/note="DoxX; Region: DoxX; cl17842"
/db_xref="CDD:248396"
gene complement(170339..171253)
/locus_tag="BAMEG_0199"
/db_xref="GeneID:7784272"
CDS complement(170339..171253)
/locus_tag="BAMEG_0199"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812850.1"
/db_xref="GI:227812841"
/db_xref="GeneID:7784272"
/translation="MDTSLKNALKKAQRKQLLKIIITSILVVIILIPIIYKVGNYFAA
KGSMRLHEQLFLYNSIAEPNVQIDSQVTSSSSMFGGNITSNRSKNINGYVVKWNTLTS
PYNWFRSNIDYNEVIPGTHWGRSNTESYNYDKQTKNKVATFYNPAIKEYYDGVKNELS
AVSKMENYVAEVAISFDQPYTLKEIQTKIPDNLNIVWLYMVSPIRDESGGPAGMPVYG
FEPGTPLEESYKGFFDSLKQYNDGYDKDIQKFLKSNENKPFDQVKILGVMLTGKTENF
KALENQNFIRGASVGVTAQIVPYIKPEK"
misc_feature complement(170966..>171148)
/locus_tag="BAMEG_0199"
/note="Sigma factor regulator N-terminal; Region:
Sigma_reg_N; pfam13800"
/db_xref="CDD:205973"
misc_feature complement(170375..170758)
/locus_tag="BAMEG_0199"
/note="Sigma factor regulator C-terminal; Region:
Sigma_reg_C; pfam13791"
/db_xref="CDD:205964"
gene complement(171253..171744)
/locus_tag="BAMEG_0200"
/db_xref="GeneID:7786078"
CDS complement(171253..171744)
/locus_tag="BAMEG_0200"
/note="identified by match to protein family HMM PF04542;
match to protein family HMM PF04545; match to protein
family HMM PF08281; match to protein family HMM TIGR02937"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-70 factor"
/protein_id="YP_002812851.1"
/db_xref="GI:227812842"
/db_xref="GeneID:7786078"
/translation="MGKENILTSYLINLGEEVFKLLLAKGAIKEDAEDIIQNTFYKVY
TLLDDLTENNIRPWFFRVALNEYIDLKRKKEQQNIYLTEEIYSKLQYTDRELDAVLNK
DEIFYLLKDIKLEYKEAFFLKYYYDFTYEEIALILDIRVNSVKQKLHRARKTIHSTVG
GKP"
misc_feature complement(171268..171696)
/locus_tag="BAMEG_0200"
/note="RNA polymerase sigma factor, SigM family; Region:
SigM_subfam; TIGR02950"
/db_xref="CDD:163082"
misc_feature complement(171523..>171657)
/locus_tag="BAMEG_0200"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature complement(171280..171441)
/locus_tag="BAMEG_0200"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(171289..171291,171295..171300,
171304..171312,171316..171321,171325..171327,
171355..171360,171376..171378,171406..171408))
/locus_tag="BAMEG_0200"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene complement(171885..172847)
/locus_tag="BAMEG_0201"
/db_xref="GeneID:7782951"
CDS complement(171885..172847)
/locus_tag="BAMEG_0201"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="group-specific protein"
/protein_id="YP_002812852.1"
/db_xref="GI:227812843"
/db_xref="GeneID:7782951"
/translation="MNSYTLVELNGFHTDFNIPFNRQTEGGVILVNYSVKNSSAKDIY
YMPALDISFTGAQKVYSNYKDLIPKEDQLPTKLAPTNDYLVKAGETISGYIAYPFGKD
DLAKISSLSTVSVTVPTAQANKGKFDAPIGSPGSFSLSLNKQGAEKVATDKAFYQDKA
TANNMGDKKMLKEKSSINNSQELGAVNVTLDGYQFTQFTPNSVEAPRFANFKNGIVLL
TVKFKLDNKDTQDVSLSPISSTLRVNDGTQYTINEGMLLNYDYNASVKTGTSGELLQV
FILDQEQYEKIWKEKSFEIELGPMRNKEAKDISQGKKAKFTLPK"
gene complement(172844..173185)
/locus_tag="BAMEG_0202"
/db_xref="GeneID:7782769"
CDS complement(172844..173185)
/locus_tag="BAMEG_0202"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="putative lipoprotein"
/protein_id="YP_002812853.1"
/db_xref="GI:227812844"
/db_xref="GeneID:7782769"
/translation="MSKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEK
TDTTKENKPEEKNPKTRKLKIKRRKIPLLAPAIILNLFPTWKKKQAEKQKFFLKIRNH
KSINLKMFQYR"
gene 173598..173726
/locus_tag="BAMEG_0203"
/db_xref="GeneID:7782041"
CDS 173598..173726
/locus_tag="BAMEG_0203"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
premature stop; identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812854.1"
/db_xref="GI:227812845"
/db_xref="GeneID:7782041"
/translation="MRPLKLEEYMMNQLKDKVAVVTGVSRLDGIGAAICKELAEAG"
misc_feature 173637..>173723
/locus_tag="BAMEG_0203"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene 173766..174401
/locus_tag="BAMEG_0204"
/db_xref="GeneID:7786455"
CDS 173766..174401
/locus_tag="BAMEG_0204"
/note="catalyzes the first of the two reduction steps in
the elongation cycle of fatty acid synthesis"
/codon_start=1
/transl_table=11
/product="3-ketoacyl-ACP reductase"
/protein_id="YP_002812855.1"
/db_xref="GI:227812846"
/db_xref="GeneID:7786455"
/translation="MPWGVDQSEQIQLQEELLKNGVKVSSMELDLTQNDAPKELINKV
TEQLGYPHILINNAAYSTNNDFSNLTAEELDKHYMVNIRATTLLSSQFARGFDKKSGG
RIVNMTSGQFQGPMVGELAYATTKGAIDALTSSLSAEVAHLGITVNAINPGPTDTGWM
TEEIKQGLKPMFPFGRIGEPKDAARLIKFLVSEEAEWITGQVIHSEGGFKR"
misc_feature 173820..174377
/locus_tag="BAMEG_0204"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(173850..173858,173934..173942,174003..174005,
174084..174092,174129..174131,174141..174143,
174219..174230,174234..174239)
/locus_tag="BAMEG_0204"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(174006..174008,174090..174092,174129..174131,
174141..174143)
/locus_tag="BAMEG_0204"
/note="active site"
/db_xref="CDD:212491"
gene complement(174439..175107)
/locus_tag="BAMEG_0205"
/db_xref="GeneID:7785414"
CDS complement(174439..175107)
/locus_tag="BAMEG_0205"
/note="identified by match to protein family HMM PF00528"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002812856.1"
/db_xref="GI:227812847"
/db_xref="GeneID:7785414"
/translation="MENKSFLDEWGKVIWEATIQTFQMTSISLFISILIALPLGVTLV
LTRPGGQHENKIIYSILNTIINIIRSLPFIILLFFILPFTKFLMGTSIGVQGVIVPLV
VFTAPYIARLMETALLEVDRGVIEAYQAMGVSTIQIIWHVMVKEARPSLVLGLTIATI
GLIGATAMAGLVGAGGLGDLAYRFGHLRYEPEVMYATVFILIILVQGLQSLGNGIARR
LKKD"
misc_feature complement(<174619..>174837)
/locus_tag="BAMEG_0205"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(174670..174672,174682..174687,
174703..174741))
/locus_tag="BAMEG_0205"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(175082..176122)
/locus_tag="BAMEG_0206"
/db_xref="GeneID:7783888"
CDS complement(175082..176122)
/locus_tag="BAMEG_0206"
/note="identified by match to protein family HMM PF00005;
match to protein family HMM PF09383"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002812857.1"
/db_xref="GI:227812848"
/db_xref="GeneID:7783888"
/translation="MIELKNVSKVFTTKKGNVEALKSTSLQVKKGEVFGIIGYSGAGK
STLIRCVNLLEKPTTGNIIVNEQDLTTLSTKELAKARQKIGMIFQGFNLLKTVTVYEN
IALPLRLAGVPKLEIEKRVEKYLRIVDLFNRKDAYPSELSGGQKQRVAIARALSHEPE
VLLSDEATSALDPETTDSILDLLLKINEEIGITILLITHEMNVIQRICDRVAVMEHGA
VVESGTVKDIFTNPQHVTTKKFVNSAFAAKIPAEVQKELQRTGEIVTLSFIGNSSGEP
ALAVATKRFQVYPNILSGNITQLKHEAYGKLVIHMQGEQNEINHALSFLQEQGIIVEG
GRTDYGKQVLFG"
misc_feature complement(175124..176122)
/locus_tag="BAMEG_0206"
/note="DL-methionine transporter ATP-binding subunit;
Provisional; Region: metN; PRK11153"
/db_xref="CDD:183001"
misc_feature complement(175424..176122)
/locus_tag="BAMEG_0206"
/note="ATP-binding cassette domain of methionine
transporter; Region: ABC_MetN_methionine_transporter;
cd03258"
/db_xref="CDD:213225"
misc_feature complement(175988..176011)
/locus_tag="BAMEG_0206"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213225"
misc_feature complement(order(175526..175528,175625..175630,
175856..175858,175985..175993,175997..176002))
/locus_tag="BAMEG_0206"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213225"
misc_feature complement(175856..175867)
/locus_tag="BAMEG_0206"
/note="Q-loop/lid; other site"
/db_xref="CDD:213225"
misc_feature complement(175673..175702)
/locus_tag="BAMEG_0206"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213225"
misc_feature complement(175625..175642)
/locus_tag="BAMEG_0206"
/note="Walker B; other site"
/db_xref="CDD:213225"
misc_feature complement(175607..175618)
/locus_tag="BAMEG_0206"
/note="D-loop; other site"
/db_xref="CDD:213225"
misc_feature complement(175520..175540)
/locus_tag="BAMEG_0206"
/note="H-loop/switch region; other site"
/db_xref="CDD:213225"
misc_feature complement(175124..175345)
/locus_tag="BAMEG_0206"
/note="NIL domain; Region: NIL; pfam09383"
/db_xref="CDD:204224"
gene complement(176135..176947)
/locus_tag="BAMEG_0207"
/db_xref="GeneID:7786669"
CDS complement(176135..176947)
/locus_tag="BAMEG_0207"
/note="identified by match to protein family HMM PF03180"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_002812858.1"
/db_xref="GI:227812849"
/db_xref="GeneID:7786669"
/translation="MKKVLLSIVSGAVLLLGACSAGSDKEVKALDEKKITVGVTGGPH
EQIFEKVKEVAAKDGLEIDVKVFNDYVAPNVSLDEKSLDVNSYQTKSYLDVFKAERNM
KLTEVFSTVTFPMGVYSKSLKDVKDLKDGDAIAVPNDPTNELRALKLFEKAGVLKVDP
KATEKATAKDVIENPKNLKIVELEASQLPTQLSEVKAAAINTNFALGAKLSPAKDSIF
REGKDSPYVNWVVVRTENKDDAVVNKLKKAYQSKEVKEFIEKKFDGSVLPSW"
misc_feature complement(176138..176947)
/locus_tag="BAMEG_0207"
/note="ABC-type metal ion transport system, periplasmic
component/surface antigen [Inorganic ion transport and
metabolism]; Region: NlpA; COG1464"
/db_xref="CDD:31653"
misc_binding complement(177033..177147)
/note="SAM riboswitch (S box leader)"
/bound_moiety="S-adenosyl methionine"
gene complement(177227..178135)
/locus_tag="BAMEG_0209"
/db_xref="GeneID:7781931"
CDS complement(177227..178135)
/locus_tag="BAMEG_0209"
/note="identified by match to protein family HMM PF00107;
match to protein family HMM PF08240"
/codon_start=1
/transl_table=11
/product="oxidoreductase, zinc-binding dehydrogenase
family"
/protein_id="YP_002812859.1"
/db_xref="GI:227812850"
/db_xref="GeneID:7781931"
/translation="MKAIICTQYGPPNVLQLQNIEKPIPKKNEVLVKIHATSVSTGDC
RIRGFNSPLLFWIPMRLILGLRKPRNPILGVELAGEIEDIGTDVTQFKKGDQIFALTE
LNLGGYAEYTCVHESGLITLKPTNVTYEEAAVIPFGGTSALHFLRKSRIKKGQQVLIY
GASGSVGTAAIQLAKYFGATVTAVCSNSNFELVQSLGADKVIDYTKEDFTKRRERYDI
IFDAVGKHKKSLCKQVLAPNGKYVSVNGMMAKVSKEDMILLKKLTETEHLKPVIDRTY
RLEEIAEAHMYVEIGHKKGNVSITLK"
misc_feature complement(177236..178135)
/locus_tag="BAMEG_0209"
/note="NADPH:quinone reductase and related Zn-dependent
oxidoreductases [Energy production and conversion /
General function prediction only]; Region: Qor; COG0604"
/db_xref="CDD:30949"
misc_feature complement(177239..178126)
/locus_tag="BAMEG_0209"
/note="Medium chain dehydrogenases/reductase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR1; cd08267"
/db_xref="CDD:176228"
misc_feature complement(order(177389..177397,177401..177406,
177467..177472,177524..177526,177569..177571,
177578..177583,177635..177640,177644..177655,
177713..177715,177725..177727,178001..178003,
178010..178018))
/locus_tag="BAMEG_0209"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176228"
gene 178281..179045
/locus_tag="BAMEG_0210"
/db_xref="GeneID:7787314"
CDS 178281..179045
/locus_tag="BAMEG_0210"
/codon_start=1
/transl_table=11
/product="putative lipoprotein"
/protein_id="YP_002812860.1"
/db_xref="GI:227812851"
/db_xref="GeneID:7787314"
/translation="MKKIIFVSSLVLAISLGVGCSNEKTAKTDEPKKESVQKEKELTA
KDVFKKTNEAFKNEEHVTMTYGVGVKAEGTEMDIVKAKMQLEPKTKNSRSEMNISGTD
VVVYTVDGKVAGEVKKPNTGEVITVPEEQLNAGGMKATQDIIDKLEVPEVVLDKMKLE
KSGDKYKLKFTLKGQETESMLTSMDETQKKMLQAQNAKIEEVDAEYIITKDFKYESAK
IDMIMSSNGKDKAHIITNAKYTSYEKFDPIQLPAAK"
gene 179157..180593
/locus_tag="BAMEG_0211"
/db_xref="GeneID:7785994"
CDS 179157..180593
/locus_tag="BAMEG_0211"
/note="identified by match to protein family HMM PF01565"
/codon_start=1
/transl_table=11
/product="oxidoreductase, FAD-binding"
/protein_id="YP_002812861.1"
/db_xref="GI:227812852"
/db_xref="GeneID:7785994"
/translation="MKKGKIAVVTVAYTVLLATSVHTYKKQLDHPIMSDVGKLLPTKI
KRVESATDEHSLIKLVQDANVSGEKISIAGMQHSQGGQTYYPHGTMLDMKGYNKILEF
DPEKKRITVQSGVTWNDIQKKVNPYGLAVQVMQSQNIFTVGGSLSVNVHGRDIRHEAL
IDTVESFRLLMADGIVRNVSREENADLFPYVIGGYGLFGVILDVTLKLTNDELYETHT
KMLDYKEYTSYFKEKVKKDANVRMHLARISVAPNSFLREMYVTDYTLAQNQNMREEYS
ELKEETIIAAPKFLLGLSRYSDWGKNTFWDIQRSYFERTDGKYETRNNVMRSDSTFME
YENPNRTEVLQEYFVPIDSFTEYIDDLRNVLNEEEFNLLNITIRYVEKNENAVLSYAK
DDMFALVLLINQGRSENEIKKTEGVIQKMIDVTLKHNGSYYLPYYSYPTKEQLKRAYP
RIEEFLGKKKEADPKERFVNLFYREYTK"
misc_feature 179277..180560
/locus_tag="BAMEG_0211"
/note="FAD/FMN-containing dehydrogenases [Energy
production and conversion]; Region: GlcD; COG0277"
/db_xref="CDD:30625"
misc_feature 179304..179696
/locus_tag="BAMEG_0211"
/note="FAD binding domain; Region: FAD_binding_4;
pfam01565"
/db_xref="CDD:201863"
gene 180590..181123
/locus_tag="BAMEG_0212"
/db_xref="GeneID:7784035"
CDS 180590..181123
/locus_tag="BAMEG_0212"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812862.1"
/db_xref="GI:227812853"
/db_xref="GeneID:7784035"
/translation="MTYRRFVASQSIIMMAGSMVFPFYILLLRNVGNSFSQFGWAYGL
FALTSALVYPLVGKLSDRVGDQKLLIIYAWTMAILMLCFPIATEVWHVYILQILMGVL
GAVQRNTEKTSLARKVVQENAGYEIGKYHVWTSIGGAVAIIATGYLVDFFTIGTIFYI
ASILYVVSGVVLSSKKI"
misc_feature 180605..>181102
/locus_tag="BAMEG_0212"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature 180623..>181105
/locus_tag="BAMEG_0212"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(180638..180640,180647..180655,180659..180664,
180713..180715,180722..180727,180734..180736,
180746..180751,180755..180760,180896..180901,
180908..180913,180920..180925,180932..180934,
180968..180973,180980..180985,181001..181003)
/locus_tag="BAMEG_0212"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 181202..182923
/locus_tag="BAMEG_0213"
/db_xref="GeneID:7782359"
CDS 181202..182923
/locus_tag="BAMEG_0213"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812863.1"
/db_xref="GI:227812854"
/db_xref="GeneID:7782359"
/translation="MKFLILAILTLFLIPWTRRSGSKLRAVDKKGDEKVVKGKKSSIL
VIPVLFWIGIAIYEYFWLIDDRADSILTHYSVAVAILIGLVLFSQDQIGKLEGTLKGL
LMFVLLASYGYFGYLHDIVISQTKYDSVVKIEKDISEPFTENDQPFTVPPKTAENKMK
KVFGDIPKVAYFELGELTPQMVNGEALYVAPIEVSGFFKARKAETIPGYVTMSGTNPD
AEAKLHLGYKMKYVPSMFFGNNLERVVRQAEPNLIFKGKPKFEVDDKGKPYYTMTYGE
FISGRSGFEIEGVVVVDAQTGEVKRYDKGKAPKFIDGVLNHETASTLNTYFGKYIHGF
WNTKFSQTDMKIPTEWGTKEGVTPIFGKDGTLYYFTDFTSPKEGVDSALGYSLIDART
GKLYYYNGKEVKGIMDGSAASEVVDNSFKREKWHGTMPVIYNVYGKPSWIVPVIDDGG
LVRAHTVIYASNAKIFATGSTQKEALENYKNALSGSGDSFRPTSSSKEAQKEGVVQRV
YKEKTGENTIVYVLLENEQKVFMIPAKKFPYAMFTEVGDPIQITYLDTGEAMSSVSKF
TNSNLNK"
misc_feature 181244..181582
/locus_tag="BAMEG_0213"
/note="Domain of unknown function (DUF3981); Region:
DUF3981; pfam13139"
/db_xref="CDD:205320"
gene 183105..184301
/locus_tag="BAMEG_0214"
/db_xref="GeneID:7785271"
CDS 183105..184301
/locus_tag="BAMEG_0214"
/note="identified by match to protein family HMM PF07690;
match to protein family HMM TIGR00710"
/codon_start=1
/transl_table=11
/product="Bcr/CflA family multidrug resistance
transporter"
/protein_id="YP_002812864.1"
/db_xref="GI:227812855"
/db_xref="GeneID:7785271"
/translation="MILVLGTLTAIGPLSIDMYLPSLPKLTDDLQTGASLAQLTLTAC
LLGLSVGQLFVGSISDIYGRRKPLIIALIIYVASSLLCAVAPSIWTLVLLRFLQGASG
SAGIVISRAMVRDMYSGSEMTKFFSLLMLVNGAAPILAPIIGGQLLQFTTWRGVFIVL
GAISVFMLISATFVLRETLPPEERETGGLSGTLATYGKLLKDRLFMGYALSQGLVTAA
MFAYISGSPFVLQNIYGASPQQFSLFFAINGIGIIIASQVTGRLAGKVNEKTLFVSGI
VIAAVGGLSLLLTILLGIGLIGVLCSLFLVVSSVGVVSTTGFSLAMRNQKQAAGTASA
LLGLLQFISGALVAPLVGIGGSNTALPMGIVIALCEIGAVLCYLFMARRSEKQFELQA
RQNLEV"
misc_feature 183108..184244
/locus_tag="BAMEG_0214"
/note="drug resistance transporter, Bcr/CflA subfamily;
Region: efflux_Bcr_CflA; TIGR00710"
/db_xref="CDD:162006"
misc_feature 183108..>183944
/locus_tag="BAMEG_0214"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(183150..183152,183159..183167,183171..183176,
183225..183227,183234..183239,183246..183248,
183258..183263,183267..183272,183408..183413,
183420..183425,183432..183437,183444..183446,
183480..183485,183492..183497,183513..183515,
183750..183752,183759..183764,183771..183776,
183783..183785,183825..183827,183837..183839,
183849..183851,183858..183860,183870..183872)
/locus_tag="BAMEG_0214"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 184552..185052
/locus_tag="BAMEG_0215"
/db_xref="GeneID:7784741"
CDS 184552..185052
/locus_tag="BAMEG_0215"
/codon_start=1
/transl_table=11
/product="putative lipoprotein"
/protein_id="YP_002812865.1"
/db_xref="GI:227812856"
/db_xref="GeneID:7784741"
/translation="MKKALGIAVMGSMILLAGCNGSKDTKEPKEKVEQSTEQTEEMKE
YRAVHEKYDLKMNKEINNALQLFEVAKEKGGKEITTATYKEDVQKVTTSMLEDIDHIR
KEIRVPKSKEQEHEVYVGFLNESEQAMKKLQKLAKEDSSLIRDIEINFATASTYYKRF
QAETKK"
misc_feature 184627..184935
/locus_tag="BAMEG_0215"
/note="Protein of unknown function (DUF3887); Region:
DUF3887; pfam13026"
/db_xref="CDD:205207"
gene complement(185069..185284)
/locus_tag="BAMEG_0216"
/db_xref="GeneID:7782762"
CDS complement(185069..185284)
/locus_tag="BAMEG_0216"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812866.1"
/db_xref="GI:227812857"
/db_xref="GeneID:7782762"
/translation="MDPLLLATIGLPLTIVILVIIGFYKLFIKKKSITSFYTPFDNIT
GQTISEFHEEQKVLVSEDEDGDGKKKK"
misc_feature complement(185126..185275)
/locus_tag="BAMEG_0216"
/note="Protein of unknown function (DUF3951); Region:
DUF3951; pfam13131"
/db_xref="CDD:205312"
misc_binding 185457..185562
/note="SAM riboswitch (S box leader)"
/bound_moiety="S-adenosyl methionine"
gene 185693..186616
/locus_tag="BAMEG_0218"
/db_xref="GeneID:7785098"
CDS 185693..186616
/locus_tag="BAMEG_0218"
/note="identified by match to protein family HMM PF00528"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter permease"
/protein_id="YP_002812867.1"
/db_xref="GI:227812858"
/db_xref="GeneID:7785098"
/translation="MEVYVIKKLSVMVFTLWVITTVTFLIMHIIPGDPFSSDAKIFPE
EVIQNMRAKYHLDEPLWNQYVAYLDGVVHFDFGESVQSTGQGVSEIITTGFGPSAIIG
LQALIISLLVGIAAGTFAALYHGKVIDYSVSLLAILGISIPSFILAPLFIQVFAIQFE
LLPVASWGTFEHTVLPSFALALGPIAVITRFVRSNMIEVLQSDYIKLARAKGIPIKKI
IIRHALRNAIVPVLTFVGPLMAGLLTGTFVIEKIFSIPGLGKYFVDSIFNRDYPVIMG
TTIFYSALLILCIFITDIIHRIVDPRIRSIT"
misc_feature 185693..186604
/locus_tag="BAMEG_0218"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppB; COG0601"
/db_xref="CDD:30946"
misc_feature 185975..186553
/locus_tag="BAMEG_0218"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(186023..186028,186035..186040,186053..186055,
186086..186097,186101..186130,186137..186142,
186146..186148,186239..186244,186248..186250,
186254..186256,186263..186268,186272..186274,
186284..186289,186296..186298,186347..186349,
186389..186394,186401..186403,186422..186433,
186440..186445,186470..186475,186503..186508,
186515..186520,186524..186529,186536..186541,
186548..186553)
/locus_tag="BAMEG_0218"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(186104..186148,186422..186439)
/locus_tag="BAMEG_0218"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(186146..186148,186224..186226,186440..186442,
186464..186466,186473..186475,186503..186505)
/locus_tag="BAMEG_0218"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(186299..186337,186353..186358,186368..186370)
/locus_tag="BAMEG_0218"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 186633..187637
/locus_tag="BAMEG_0219"
/db_xref="GeneID:7786031"
CDS 186633..187637
/locus_tag="BAMEG_0219"
/note="identified by match to protein family HMM PF00528"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter permease"
/protein_id="YP_002812868.1"
/db_xref="GI:227812859"
/db_xref="GeneID:7786031"
/translation="MGAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIA
VLGSVTLLLIIVFSLIGESLTPFTASEQVKKATNLPPSSEHWFGTDDLGRDIWARTWA
GGKISLTVGLVAAALDIGLGVLIGGFSGYVRGRNCLGTLIDEWIIRGIEVLYGIPYLL
IVILLLIVMKPGLFTIIIALALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKI
IYGHLIPNLTGIIIVNLSFTIPAAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLS
GEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIIKRNRKEKKHGASLIFRKRNISR
"
misc_feature 186711..187574
/locus_tag="BAMEG_0219"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppC; COG1173"
/db_xref="CDD:31366"
misc_feature 186717..186878
/locus_tag="BAMEG_0219"
/note="N-terminal TM domain of oligopeptide transport
permease C; Region: OppC_N; pfam12911"
/db_xref="CDD:205142"
misc_feature 186948..187541
/locus_tag="BAMEG_0219"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(186990..186995,187002..187007,187020..187022,
187068..187079,187083..187103,187104..187106,
187179..187184,187188..187190,187194..187196,
187203..187208,187212..187214,187224..187229,
187236..187238,187287..187289,187329..187334,
187341..187343,187362..187373,187380..187385,
187425..187430,187491..187496,187503..187508,
187512..187517,187524..187529,187536..187541)
/locus_tag="BAMEG_0219"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(187086..187103,187104..187106,187362..187379)
/locus_tag="BAMEG_0219"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(187104..187106,187164..187166,187380..187382,
187419..187421,187428..187430,187491..187493)
/locus_tag="BAMEG_0219"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(187239..187277,187293..187298,187308..187310)
/locus_tag="BAMEG_0219"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 187594..188604
/locus_tag="BAMEG_0220"
/db_xref="GeneID:7786328"
CDS 187594..188604
/locus_tag="BAMEG_0220"
/note="identified by match to protein family HMM PF00005;
match to protein family HMM PF08352; match to protein
family HMM TIGR01727"
/codon_start=1
/transl_table=11
/product="oligopeptide ABC transporter ATP-binding
protein"
/protein_id="YP_002812869.1"
/db_xref="GI:227812860"
/db_xref="GeneID:7786328"
/translation="MAQVLSLENVTLAVEKENSKQAIVKHVSFFINEGEIVALVGESG
SGKSVTAQSIIGLNQESIQFDDGNISFESKDLTNLQESEWNQIRGKDISFIFQDPLSS
LNPTMKVGRQITEVILQHEKKSKKEAKEIAINLLNDLGIHEAEKRFEQYPHQLSGGMR
QRICLAIAFACHPKLVIADEPTTALDVTIQKQIMGLLKERKEKQNTSILLITHDLALV
REVADRVVVMYGGRIVEKGTIQEVIGSPKHPYTKSLLQAIPNMDDAEKVLRAIEGTTP
SIETLNSFGCPFVNRCPVAIQECIHRFPERTTYSAEHSSHCWQHVLEHDRAKSKEKVN
VS"
misc_feature 187603..188547
/locus_tag="BAMEG_0220"
/note="ABC-type dipeptide/oligopeptide/nickel transport
system, ATPase component [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppD; COG0444"
/db_xref="CDD:30793"
misc_feature 187603..188304
/locus_tag="BAMEG_0220"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature 187714..187737
/locus_tag="BAMEG_0220"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(187723..187728,187732..187740,187882..187884,
188128..188133,188230..188232)
/locus_tag="BAMEG_0220"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 187873..187884
/locus_tag="BAMEG_0220"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 188056..188085
/locus_tag="BAMEG_0220"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 188116..188133
/locus_tag="BAMEG_0220"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 188140..188151
/locus_tag="BAMEG_0220"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 188218..188238
/locus_tag="BAMEG_0220"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
misc_feature 188287..188547
/locus_tag="BAMEG_0220"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:214141"
gene 188601..189374
/locus_tag="BAMEG_0221"
/db_xref="GeneID:7784208"
CDS 188601..189374
/locus_tag="BAMEG_0221"
/note="identified by match to protein family HMM PF00005"
/codon_start=1
/transl_table=11
/product="oligopeptide ABC transporter ATP-binding
protein"
/protein_id="YP_002812870.1"
/db_xref="GI:227812861"
/db_xref="GeneID:7784208"
/translation="MTTDLITVKQVTKTYGSKNKEIAALKDISLAIPKGTTLGIIGES
GSGKTTLGKLIAGIESPTSGEIDYNGQVVHKLKAAHKRDFLQKVQFIFQDSTAALNPR
WKVRDSVTEGYISFGLGDKGLKDKVAGDALERVGLDRRYINRYPHEFSGGQRQRIAIA
RALLCEPEVLILDEPISALDVSLQIQIVHLLQKIQREQGYTYLFIAHDLPMVHYLCEK
VAVLYKGELVEFGNTDEVFRNPQHSYTKTLLASTPKISG"
misc_feature 188613..189368
/locus_tag="BAMEG_0221"
/note="ABC-type dipeptide/oligopeptide/nickel transport
system, ATPase component [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppF; COG1124"
/db_xref="CDD:31321"
misc_feature 188613..189293
/locus_tag="BAMEG_0221"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature 188724..188747
/locus_tag="BAMEG_0221"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(188733..188738,188742..188750,188877..188879,
189117..189122,189219..189221)
/locus_tag="BAMEG_0221"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 188868..188879
/locus_tag="BAMEG_0221"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 189045..189074
/locus_tag="BAMEG_0221"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 189105..189122
/locus_tag="BAMEG_0221"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 189129..189140
/locus_tag="BAMEG_0221"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 189207..189227
/locus_tag="BAMEG_0221"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
misc_feature 189282..>189365
/locus_tag="BAMEG_0221"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; pfam08352"
/db_xref="CDD:203916"
gene 189388..190998
/locus_tag="BAMEG_0222"
/db_xref="GeneID:7784513"
CDS 189388..190998
/locus_tag="BAMEG_0222"
/note="identified by match to protein family HMM PF00496"
/codon_start=1
/transl_table=11
/product="oligopeptide ABC transporter
oligopeptide-binding protein"
/protein_id="YP_002812871.1"
/db_xref="GI:227812862"
/db_xref="GeneID:7784513"
/translation="MKKFLLFVIMTVLAITSVACGKKETQKASAGKGEGDRLVTNISS
DPYTLDAAISTDSTSGYVIGHLFSSLYTQDSDGKYQNELAEKEEVNADGTEYTIHLKK
DIKWSDGSPITANDFEFAWKRLLNPKTGSMNATEMYFIKGAEAYNTGKGEEGQVGIQV
VDPQTLKITLEHPVSSIKQKLASSLFIPLSKKSIDDNNKLKTNPKELITNGPFTLKEW
KHNQAITVQKNKEYYDKKVTLKEIEFRIIPDSKTAYQLYKSKELDLLSGLPQEMIEKE
KGNKEYKRVAGFSSYIYSFNVEKEPFTNAKVRKAFSLAVDRKFIVEKLYKNNAQEAYA
FVPEGAKTQGGRDFRKEKGDYVKFDPEEAKKLLEEGMKEQGWSTLPAVTLKFTTDTQH
KKVAEAMQEMFKKNLGVDIKLENKEWKSYIDTYKQSDFQLAYMGWGGSLLDPITKLDL
YAGDGLNNYAKWHNKEFDALVKEAEVEQNEDKRFDLLHKAEDIMFTDSPLIPIIFPSD
SYLQKESVSGLQYYVGSKPDLRYVKIKK"
misc_feature 189388..190995
/locus_tag="BAMEG_0222"
/note="ABC-type oligopeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
OppA; COG4166"
/db_xref="CDD:33908"
misc_feature 189493..190983
/locus_tag="BAMEG_0222"
/note="The substrate-binding component of an ABC-type
oligopetide import system contains the type 2 periplasmic
binding fold; Region: PBP2_OppA; cd08504"
/db_xref="CDD:173869"
misc_feature order(189565..189567,190183..190185,190246..190248,
190639..190641,190687..190689,190693..190707,
190903..190905)
/locus_tag="BAMEG_0222"
/note="peptide binding site [polypeptide binding]; other
site"
/db_xref="CDD:173869"
gene complement(191015..191482)
/locus_tag="BAMEG_0223"
/db_xref="GeneID:7782157"
CDS complement(191015..191482)
/locus_tag="BAMEG_0223"
/codon_start=1
/transl_table=11
/product="putative lipoprotein"
/protein_id="YP_002812872.1"
/db_xref="GI:227812863"
/db_xref="GeneID:7782157"
/translation="MRTLLSVLLALMLVPALTGCKAPAKEDTTSNKKTTEEAKNETPA
DLKLNFNEFSLDADYQDTKKDYEADYKNVAADKKMEAKIEDHKADVNLTGDEAITKLS
PLLQELKFDKGTPDQEVIDQVLNVFKLDKDYQKFELEVVFSDGTKKEYKREIK"
misc_feature complement(191051..191335)
/locus_tag="BAMEG_0223"
/note="YusW-like protein; Region: YusW; pfam14039"
/db_xref="CDD:206209"
gene 191654..192553
/locus_tag="BAMEG_0224"
/db_xref="GeneID:7785208"
CDS 191654..192553
/locus_tag="BAMEG_0224"
/note="identified by match to protein family HMM PF00165"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_002812873.1"
/db_xref="GI:227812864"
/db_xref="GeneID:7785208"
/translation="MHEEYKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIF
QRYIGMSVTDYIRKRRLTHAAQVLVSTERAVIDIAMQYGFSSQEAFTRAFKRMFQLPP
KKYRKYFQSFYIEREGVSMQKGIPKGWILSGSHPAEYEMGLDYEVVHQGKVSAYIKAK
ENVTHGGFSTLMQMFRADKYVGKRLRFTAFVKSENVRDWAGLWMRVDGKETEPFAMDN
MQNRPIKNTNNWQSYSVVLDIKEGALGIAFGVLLSGEGCVWLDSIRFDEVDEKIPTTD
LAENFYETLLEEPVNLQFEEVEK"
misc_feature 191699..191824
/locus_tag="BAMEG_0224"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature 191720..191971
/locus_tag="BAMEG_0224"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature 191861..191974
/locus_tag="BAMEG_0224"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 192626..192763
/locus_tag="BAMEG_0225"
/db_xref="GeneID:7784897"
CDS 192626..192763
/locus_tag="BAMEG_0225"
/codon_start=1
/transl_table=11
/product="putative lipoprotein"
/protein_id="YP_002812874.1"
/db_xref="GI:227812865"
/db_xref="GeneID:7784897"
/translation="MGINYLVSYIWSGHTPSLTWKTYLMFLFIFMMSFSSMQKEGEED
Y"
gene 192760..193107
/locus_tag="BAMEG_0226"
/db_xref="GeneID:7787018"
CDS 192760..193107
/locus_tag="BAMEG_0226"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812875.1"
/db_xref="GI:227812866"
/db_xref="GeneID:7787018"
/translation="MTIVFFAFLSLTQMFLTVFGNAGMIFNIISLSLQLVSSGVIVPH
EMLSKTYQTIGELFPATYAANGYYTIIFGGVSLERNIISLLVIVLVTQSVAVMTLAIK
GIVKGRSSVVKEA"
misc_feature <192760..193059
/locus_tag="BAMEG_0226"
/note="YhgE/Pip C-terminal domain; Region: pip_yhgE_Cterm;
TIGR03062"
/db_xref="CDD:163121"
gene complement(193152..194792)
/locus_tag="BAMEG_0227"
/db_xref="GeneID:7786062"
CDS complement(193152..194792)
/locus_tag="BAMEG_0227"
/note="identified by match to protein family HMM PF00496"
/codon_start=1
/transl_table=11
/product="putative oligopeptide ABC transporter
oligopeptide-binding protein"
/protein_id="YP_002812876.1"
/db_xref="GI:227812867"
/db_xref="GeneID:7786062"
/translation="MKKKVVPVVASVLGASLLLTACGGNKDNASGAKANDKAPDKQAI
NLSFASEIPTMDVAKATDGESMNVMRNVFEGLYAMGEDNKPIPGVAESVDVSADKTKY
TFHLRDSKWSNGTPVTAKDFVFAWQRAVNPDTAAEYAFLFFDIKNAKQINQKQLPVDQ
LGIKAVDDKTLEVQLDRPVPYFLSLTTFSTFLPINEEYLKSQGDKYGLETNHLIYNGA
FTLDNWKHEQSFQLKKNPNYWDAKTVKLEEINFNVVKDKSTEVNLYDSGQIDRVALTA
EFVDKYKGDPNFKERAEVGIQFLRLNQKNETLKNQHARLAINGAMNKKAYVETILNNG
AVPAEGMIPAKFAKSPDGNDFRKENGNLVKDDVKTAKENWKKAKQELGTDKVTIELLT
SDNALAKKTGEYLKGELEKNLDGLTVNLKPQPRKQQLKLLLSGDYEIGIDGWGPDFAD
PITFLDLFTTDSAYNFDKYSNKEYDELIHKVKTDLAGDEKARFEAMKQAEKILLQDGA
VAPLYQQGRSYLQRSFIKGLVTTDFGGEFNYKWTEVAK"
misc_feature complement(193155..194708)
/locus_tag="BAMEG_0227"
/note="ABC-type oligopeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
OppA; COG4166"
/db_xref="CDD:33908"
misc_feature complement(193170..194669)
/locus_tag="BAMEG_0227"
/note="The substrate-binding component of an ABC-type
oligopetide import system contains the type 2 periplasmic
binding fold; Region: PBP2_OppA; cd08504"
/db_xref="CDD:173869"
misc_feature complement(order(193248..193250,193452..193466,
193470..193472,193518..193520,193914..193916,
193974..193976,194595..194597))
/locus_tag="BAMEG_0227"
/note="peptide binding site [polypeptide binding]; other
site"
/db_xref="CDD:173869"
gene complement(195180..196820)
/locus_tag="BAMEG_0228"
/db_xref="GeneID:7786873"
CDS complement(195180..196820)
/locus_tag="BAMEG_0228"
/note="identified by match to protein family HMM PF00496"
/codon_start=1
/transl_table=11
/product="putative oligopeptide ABC transporter
oligopeptide-binding protein"
/protein_id="YP_002812877.1"
/db_xref="GI:227812868"
/db_xref="GeneID:7786873"
/translation="MKKKFVPGIASVVGVSILLTGCGSYKNEASGANAKDEAPSKQVL
NLSSPTEIRTMDTARATDTDSGQVMRNVFEGLYNLGEGNKPIPGVAKSHEVSGDKTKY
TFHLRDSKWSNGTPVTAKDFVFAWQRAVDPATASEYAFLFFDIKNATKINNKELPADQ
LGVKAVDDHTFEVELERPVPYFISLTAFPTFLPINEEFFKAQGDKYALEDNTILYNGA
FTLSDWKHEQSFKFKKNPTYWDKDTVKLEEINFNVVKEKSTEVNLFESKQLDRIKLTS
DFVDKYKKYANFKERPNVGVQFLRMNQQNKVLQNVSARQAIDQTIDRKSFVNTLLNDG
STPTFGLVPKNFAKGPDGKDFRTINGDLTKVDTKSAQELWKKAKQELGSEKITLELLT
SDADLDKKTGEFLKGQLEKNLDGLTVNVKPQPRKQQVSLLLKGDYEIGIDGWSPDFAD
PITFLELFTTNNPYNLDHYSNKEFDKTIEKVKTTLAGDEKARWEALLASEKILFKDSV
IAPLYQKGESYLERSYVKGIVQVDFAGQLNFKWAQIEK"
misc_feature complement(195183..196820)
/locus_tag="BAMEG_0228"
/note="ABC-type oligopeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
OppA; COG4166"
/db_xref="CDD:33908"
misc_feature complement(195195..196697)
/locus_tag="BAMEG_0228"
/note="The substrate-binding component of an ABC-type
oligopetide import system contains the type 2 periplasmic
binding fold; Region: PBP2_OppA; cd08504"
/db_xref="CDD:173869"
misc_feature complement(order(195276..195278,195480..195494,
195498..195500,195546..195548,195942..195944,
196002..196004,196623..196625))
/locus_tag="BAMEG_0228"
/note="peptide binding site [polypeptide binding]; other
site"
/db_xref="CDD:173869"
misc_binding complement(196953..197059)
/note="SAM riboswitch (S box leader)"
/bound_moiety="S-adenosyl methionine"
gene complement(197212..198045)
/locus_tag="BAMEG_0230"
/db_xref="GeneID:7783911"
CDS complement(197212..198045)
/locus_tag="BAMEG_0230"
/note="identified by match to protein family HMM PF00248"
/codon_start=1
/transl_table=11
/product="oxidoreductase, aldo/keto reductase family"
/protein_id="YP_002812878.1"
/db_xref="GI:227812869"
/db_xref="GeneID:7783911"
/translation="MSLTSLKDYTTLHNGVKMPWFGLGVFKVEDGSQVIDSVKAAIKN
GYRSIDTAAIYQNEEGVGQAIRESGVSREELFITSKVWNSDQGYETTLQAFETTLEKL
GLEYLDLYLVHWPVKGKYTESWKALEKLYKDGRVRAIGVSNFHIHHLQDVFEIAEIKP
MVNQVEYHPRLAQEELHAFCKEHNIQLEAWSPLMQGQLLDNPTLQDIAKKYNKSTAQI
ILRWDLQNEVVTIPKSIKEHRIIENANIFDFELSSDDMKAIQALNEDHRVGPDPDNFN
F"
misc_feature complement(197260..198021)
/locus_tag="BAMEG_0230"
/note="Aldo-keto reductases (AKRs) are a superfamily of
soluble NAD(P)(H) oxidoreductases whose chief purpose is
to reduce aldehydes and ketones to primary and secondary
alcohols. AKRs are present in all phyla and are of
importance to both health and industrial...; Region:
Aldo_ket_red; cd06660"
/db_xref="CDD:119408"
misc_feature complement(197254..197994)
/locus_tag="BAMEG_0230"
/note="Aldo/keto reductase family; Region: Aldo_ket_red;
pfam00248"
/db_xref="CDD:201112"
misc_feature complement(order(197317..197322,197329..197331,
197344..197355,197398..197400,197461..197478,
197554..197556,197617..197622,197704..197709,
197806..197808,197881..197883,197896..197898,
197968..197976))
/locus_tag="BAMEG_0230"
/note="active site"
/db_xref="CDD:119408"
misc_feature complement(order(197707..197709,197806..197808,
197881..197883,197896..197898))
/locus_tag="BAMEG_0230"
/note="catalytic tetrad [active]"
/db_xref="CDD:119408"
gene complement(198113..198850)
/locus_tag="BAMEG_0231"
/db_xref="GeneID:7783907"
CDS complement(198113..198850)
/locus_tag="BAMEG_0231"
/note="catalyzes the formation of L-proline from
pyrroline-5-carboxylate"
/codon_start=1
/transl_table=11
/product="pyrroline-5-carboxylate reductase"
/protein_id="YP_002812879.1"
/db_xref="GI:227812870"
/db_xref="GeneID:7783907"
/translation="MLTKHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEK
LDQLRARYNVSTTTDWKQHVTSVDTIVLAMPPSAHEELLAELSPLLSNQLVVTVAAGI
SPSYLEERLPGGTPVAWIMPNTAAEIGKSISLYTMGQFVNETHQETLQLLLRGIGTSQ
LCTEEEVHQLTAVTGSAPAFLYYFAESLIEATKSYGVDEATAKHLVIQMISGSASMLE
QTQDPANLREQVTTPGGSTAEGLKALY"
misc_feature complement(198116..198850)
/locus_tag="BAMEG_0231"
/note="pyrroline-5-carboxylate reductase; Reviewed;
Region: PRK07634"
/db_xref="CDD:181063"
misc_feature complement(198119..198838)
/locus_tag="BAMEG_0231"
/note="Pyrroline-5-carboxylate reductase [Amino acid
transport and metabolism]; Region: ProC; COG0345"
/db_xref="CDD:30693"
gene 199038..199688
/locus_tag="BAMEG_0232"
/db_xref="GeneID:7787491"
CDS 199038..199688
/locus_tag="BAMEG_0232"
/note="identified by match to protein family HMM PF04973;
match to protein family HMM TIGR01528"
/codon_start=1
/transl_table=11
/product="nucleoside transporter, PnuC family"
/protein_id="YP_002812880.1"
/db_xref="GI:227812871"
/db_xref="GeneID:7787491"
/translation="MIRSPLFLLITSIICVLVGLYIQSSYIEIFASVMGIINVWLLAR
EKVSNFLFGMITVAVFLYIFITQGLYAMAVLAAFQFIFNVYGWYHWIARSGEEEVKAT
VRLDLKGWIFYIIFILVAWIGWGYYQVHYLESTSPYLDALNAVLGLVAQFMLSRKILE
NWHLWILYNVVSISIYISTGLYVMLILAVINLFICVAGLLEWKNNYKGQKHTNNYI"
misc_feature 199110..199655
/locus_tag="BAMEG_0232"
/note="Nicotinamide mononucleotide transporter; Region:
NMN_transporter; pfam04973"
/db_xref="CDD:147247"
gene complement(199756..200607)
/locus_tag="BAMEG_0233"
/db_xref="GeneID:7782078"
CDS complement(199756..200607)
/locus_tag="BAMEG_0233"
/note="identified by match to protein family HMM PF06800"
/codon_start=1
/transl_table=11
/product="putative transporter"
/protein_id="YP_002812881.1"
/db_xref="GI:227812872"
/db_xref="GeneID:7782078"
/translation="MDILLALLPAIAWGNILLVSVKMGGGAYSQTVGMTIGALFFATI
MYVFTQPALTMTILIVGFISGLFWALGQVNQLKTVEKLGVSTTVTISTGMQLVATSIF
GVIAFREWTTTTTIILGTIAILLIVVGVVFTSLDDKENAQPPGQLKKGLLTLIVSTFG
YLVYVIIIRWYNIDGWSAILPQAVGMFVGAVVLTSKHKPFNKYAIRNALSGLLWGTGN
LFLLLSLPRVGVATSFPLSQTGIVISTFGAIVFLGEKKTKRQLIFIALGSVLIIGGAV
LLGMTKA"
misc_feature complement(199774..200562)
/locus_tag="BAMEG_0233"
/note="Sugar transport protein; Region: Sugar_transport;
pfam06800"
/db_xref="CDD:115457"
gene complement(200894..201583)
/gene="modB"
/locus_tag="BAMEG_0234"
/db_xref="GeneID:7782544"
CDS complement(200894..201583)
/gene="modB"
/locus_tag="BAMEG_0234"
/note="identified by match to protein family HMM PF00528;
match to protein family HMM TIGR02141"
/codon_start=1
/transl_table=11
/product="molybdenum ABC transporter permease"
/protein_id="YP_002812882.1"
/db_xref="GI:227812873"
/db_xref="GeneID:7782544"
/translation="MSFDIILSPIFLSLRVAACATIIVTILGTIIGRALARSSWRYKV
ILETIFLLPMVLPPTVIGFFLIIIFGNNSPIGMWIESIFQQSIMFTSTAAIIASTVVA
FPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRAL
GEFGATLMFAGNIPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLIN
KRITNSSGSFF"
misc_feature complement(200906..201568)
/gene="modB"
/locus_tag="BAMEG_0234"
/note="ABC-type sulfate transport system, permease
component [Posttranslational modification, protein
turnover, chaperones]; Region: CysU; COG0555"
/db_xref="CDD:30901"
misc_feature complement(200960..201556)
/gene="modB"
/locus_tag="BAMEG_0234"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(200960..200965,200972..200977,
200984..200989,200993..200998,201005..201010,
201038..201043,201080..201085,201092..201103,
201122..201124,201131..201136,201176..201178,
201227..201229,201236..201241,201251..201253,
201257..201262,201269..201271,201275..201277,
201281..201286,201359..201361,201392..201397,
201404..201433,201437..201448,201476..201478,
201491..201496,201503..201508))
/gene="modB"
/locus_tag="BAMEG_0234"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(201086..201103,201359..201361,
201389..201430))
/gene="modB"
/locus_tag="BAMEG_0234"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(201008..201010,201038..201040,
201047..201049,201083..201085,201299..201301,
201359..201361))
/gene="modB"
/locus_tag="BAMEG_0234"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(201155..201157,201167..201172,
201188..201226))
/gene="modB"
/locus_tag="BAMEG_0234"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(201589..201834)
/locus_tag="BAMEG_0235"
/db_xref="GeneID:7782555"
CDS complement(201589..201834)
/locus_tag="BAMEG_0235"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="molybdate-binding protein"
/protein_id="YP_002812883.1"
/db_xref="GI:227812874"
/db_xref="GeneID:7782555"
/translation="MLTYVETGNVDAGIVYKTDALISDKVKIGETAATTSHEPIHYPL
GVIKESKHKKEATSFYEYLQSKDAQSIFKKYGFTVLP"
misc_feature complement(201592..>201831)
/locus_tag="BAMEG_0235"
/note="ABC-type molybdate transport system, periplasmic
component [Inorganic ion transport and metabolism];
Region: ModA; COG0725"
/db_xref="CDD:31069"
misc_feature complement(201607..>201831)
/locus_tag="BAMEG_0235"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
gene complement(201828..202394)
/gene="modA"
/locus_tag="BAMEG_0236"
/db_xref="GeneID:7785477"
CDS complement(201828..202394)
/gene="modA"
/locus_tag="BAMEG_0236"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift; identified by match to protein family HMM
TIGR01256"
/codon_start=1
/transl_table=11
/product="molybdenum ABC transporter periplasmic
molybdate-binding protein"
/protein_id="YP_002812884.1"
/db_xref="GI:227812875"
/db_xref="GeneID:7785477"
/translation="MNKFTLRSIGALILSFLLIFSVACTSGDKKEKSTATEGKTVELT
ISAAASLQDALKEIETKYKEKEPNIKLSFNFGASGALQQQIEQGAPADLFFSAAEDKF
QTLVKKGFINEKEGKNLLGNELVLVVPKDSSLTKIQDLKDEKIKKSHLAHLNLYLREN
TQKLLSHMKIFGMTFKIKSYLQKMCAKC"
misc_feature complement(<201954..202379)
/gene="modA"
/locus_tag="BAMEG_0236"
/note="ABC-type molybdate transport system, periplasmic
component [Inorganic ion transport and metabolism];
Region: ModA; COG0725"
/db_xref="CDD:31069"
misc_feature complement(<201942..202253)
/gene="modA"
/locus_tag="BAMEG_0236"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature complement(order(202170..202190,202194..202196,
202206..202208,202215..202220,202224..202229))
/gene="modA"
/locus_tag="BAMEG_0236"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 202556..203476
/locus_tag="BAMEG_0237"
/db_xref="GeneID:7786613"
CDS 202556..203476
/locus_tag="BAMEG_0237"
/note="identified by match to protein family HMM PF05930;
match to protein family HMM TIGR01764"
/codon_start=1
/transl_table=11
/product="putative molybdopterin biosynthesis protein"
/protein_id="YP_002812885.1"
/db_xref="GI:227812876"
/db_xref="GeneID:7786613"
/translation="MDHHSYTTEEVAKRLKVSKLTVYDLIKKGELPSYRVGRQMRIDA
ADLEQYIKQMKTGKVQVTPVKNDSNSISNTCIISGQELTLDMLAKRIENRLPSSNILR
AYQGSLTSLVKMYQGEGSIVSLHLFDGETGTYNVPYVKRILVGQPCTMINLLSRNVGF
YVQKGNPKNIKTWADLSQSSIRFVNREKGSGIRVLVDEQLRIQNLNKERISGYEWEES
NHLGVATQVANEKADVGVGSEKFSQIVNVDFIPIMKEQYDLVILKNKENEELIEVVKD
ILQSEEFHNELKAIGGYDMTKTGQIIYEIK"
misc_feature 202571..202714
/locus_tag="BAMEG_0237"
/note="DNA binding domain, excisionase family; Region:
excise; TIGR01764"
/db_xref="CDD:200128"
misc_feature order(202574..202582,202622..202624,202667..202675)
/locus_tag="BAMEG_0237"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:133389"
misc_feature 202817..203392
/locus_tag="BAMEG_0237"
/note="PBP superfamily domain; Region: PBP_like;
pfam12727"
/db_xref="CDD:205046"
gene complement(204049..204915)
/locus_tag="BAMEG_0238"
/db_xref="GeneID:7784676"
CDS complement(204049..204915)
/locus_tag="BAMEG_0238"
/note="identified by match to protein family HMM PF00126;
match to protein family HMM PF03466"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002812886.1"
/db_xref="GI:227812877"
/db_xref="GeneID:7784676"
/translation="MELRDLQIFQSVADQGSVSSAAKELNYVQSNVTARIKQLENELK
TPLFYRHKRGMTLTAEGRKMLVYVNKILQDVDELKQVFLDSETPSGILKIGTVETVST
LPTILSSYYKSYPNVDLSLQAGLTEELIREVLDHQLDGAFISGPIKHPLIEQYDVSTE
KLMLVTQNKTFHIEEFTTTPLLVFNQGCGYRSKLERWLKDEGLLPKRIMEFNILETLL
NSVALGLGITLVPQSAVHHLSKAGKVHCHAIPEKYGSISTVFIRRKDSYMTNSMRSFL
KTIEEHHHINML"
misc_feature complement(204070..204915)
/locus_tag="BAMEG_0238"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(204730..204909)
/locus_tag="BAMEG_0238"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(204079..204642)
/locus_tag="BAMEG_0238"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulators, YofA and SoxR,
contains the type 2 periplasmic binding fold; Region:
PBP2_YofA_SoxR_like; cd08442"
/db_xref="CDD:176133"
misc_feature complement(order(204247..204252,204256..204261,
204277..204294,204547..204567,204571..204573,
204583..204585,204592..204597,204601..204606))
/locus_tag="BAMEG_0238"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176133"
gene 205058..206011
/locus_tag="BAMEG_0239"
/db_xref="GeneID:7783107"
CDS 205058..206011
/locus_tag="BAMEG_0239"
/note="identified by match to protein family HMM PF00892"
/codon_start=1
/transl_table=11
/product="transporter, EamA family"
/protein_id="YP_002812887.1"
/db_xref="GI:227812878"
/db_xref="GeneID:7783107"
/translation="MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAI
MLIILLLMKEGKQAFRLEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGVMVASIME
ALMPMISICILWGYKHVKPKKYMITSMLIAFIGAVFVITKGDMSFFLTLKDNMFSLAC
IFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPNMGT
ISIVKYDLLFMMTLPGIVALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQIT
MFDIVGTLLVIAALIRNNVCQRKEENINKRILEKEQLRQAV"
misc_feature 205058..205930
/locus_tag="BAMEG_0239"
/note="Permeases of the drug/metabolite transporter (DMT)
superfamily [Carbohydrate transport and metabolism / Amino
acid transport and metabolism / General function
prediction only]; Region: RhaT; COG0697"
/db_xref="CDD:31041"
misc_feature 205094..205480
/locus_tag="BAMEG_0239"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:144477"
gene 206033..206173
/locus_tag="BAMEG_0240"
/db_xref="GeneID:7785115"
CDS 206033..206173
/locus_tag="BAMEG_0240"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812888.1"
/db_xref="GI:227812879"
/db_xref="GeneID:7785115"
/translation="MLESLLFFFAVGVACELAAINRNGRKKIKQQAEMIELLKELKER
NI"
misc_feature 206033..206170
/locus_tag="BAMEG_0240"
/note="YrzO-like protein; Region: YrzO; pfam14142"
/db_xref="CDD:206311"
gene 206541..207146
/locus_tag="BAMEG_0241"
/db_xref="GeneID:7786854"
CDS 206541..207146
/locus_tag="BAMEG_0241"
/note="identified by match to protein family HMM PF01553;
match to protein family HMM TIGR00530"
/codon_start=1
/transl_table=11
/product="putative 1-acyl-sn-glycerol-3-phosphate
acyltransferase"
/protein_id="YP_002812889.1"
/db_xref="GI:227812880"
/db_xref="GeneID:7786854"
/translation="MYKPITFSLKYIFKTAGKVEVQGREKLPEGGPYVVACTHTSFMD
VLMLATGMYPTEIHYMAKKELFEGKFKNWFFKNVNAFPVDRANPGPSTLKIPSRLLKE
GKVVGIFPSGTRSTEDVSLKAGAVTIAMRSNVPLIPAAYIGPSSVKELIKGKRAQLIF
GDPIQIDAEEQIDRKTAMKMMTDQLNEKFEGLKEALQSNQK"
misc_feature 206541..207101
/locus_tag="BAMEG_0241"
/note="1-acyl-sn-glycerol-3-phosphate acyltransferase
[Lipid metabolism]; Region: PlsC; COG0204"
/db_xref="CDD:30553"
misc_feature 206565..207110
/locus_tag="BAMEG_0241"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: AGPAT-like; Region:
LPLAT_AGPAT-like; cd07989"
/db_xref="CDD:153251"
misc_feature order(206655..206657,206664..206666,206670..206672,
206721..206732,206874..206882)
/locus_tag="BAMEG_0241"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153251"
gene 207305..207433
/locus_tag="BAMEG_0242"
/db_xref="GeneID:7786220"
CDS 207305..207433
/locus_tag="BAMEG_0242"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
premature stop"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812890.1"
/db_xref="GI:227812881"
/db_xref="GeneID:7786220"
/translation="MLFIAYSPYLFNVEATAFASIRVENIMPIVFKKLFDFILSII"
gene 207621..208598
/locus_tag="BAMEG_0243"
/db_xref="GeneID:7784182"
CDS 207621..208598
/locus_tag="BAMEG_0243"
/note="identified by match to protein family HMM PF00356;
match to protein family HMM PF00532"
/codon_start=1
/transl_table=11
/product="sugar-binding transcriptional regulator, LacI
family"
/protein_id="YP_002812891.1"
/db_xref="GI:227812882"
/db_xref="GeneID:7784182"
/translation="MANIKDIAKMAGVSVTTVSRVLNDHPYVSEEKRKAVIEIVEKLN
YSQNANAVHLSKGKTNIVGVILPYINHPSFDAMVGGMMEGALTHNYRVLLCQTNYNKK
EEMKSLHMLKTKQLDGLIICSRANDWEIIEPYASYGTIIACEDNDISNISSVYTNHSA
AFQLGMNHLIEKGYKKIGYCTGRKLGPSSQKRFDVYKQQLQSIDEEVNEEWIFTECFT
LEDGVRVAHKLKGMQNLPEALIVAGDEVAIGVMTEVGKLGIQVPEDLAIIGLDNQPIS
QVLQLTTIDQNLKEIGKTAFEMFYRHISDKSSKQEKVEIPYELVERSTV"
misc_feature 207624..208595
/locus_tag="BAMEG_0243"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:31797"
misc_feature 207633..207788
/locus_tag="BAMEG_0243"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature order(207633..207635,207657..207671,207675..207680,
207687..207689,207702..207707,207714..207716,
207753..207755,207762..207764,207771..207776,
207780..207785)
/locus_tag="BAMEG_0243"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature 207753..207782
/locus_tag="BAMEG_0243"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature 207804..208586
/locus_tag="BAMEG_0243"
/note="Ligand-binding domain of a novel transcription
factor implicated in catabolite repression in Bacillus and
Clostridium species; Region: PBP1_CcpB_like; cd06286"
/db_xref="CDD:107281"
misc_feature order(207837..207842,207849..207851,207984..207986,
208050..208052,208086..208088,208194..208196,
208269..208271,208431..208433,208476..208478)
/locus_tag="BAMEG_0243"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107281"
misc_feature order(207840..207848,207855..207860,207864..207869,
207888..207902,207906..207908,207939..207941,
207948..207950,207957..207965,208278..208280,
208362..208364,208374..208376,208383..208388)
/locus_tag="BAMEG_0243"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:107281"
gene 209195..210031
/locus_tag="BAMEG_0244"
/db_xref="GeneID:7783403"
CDS 209195..210031
/locus_tag="BAMEG_0244"
/note="identified by match to protein family HMM PF02588"
/codon_start=1
/transl_table=11
/product="yitT family protein"
/protein_id="YP_002812892.1"
/db_xref="GI:227812883"
/db_xref="GeneID:7783403"
/translation="MVNQRIKEITLITIGSLLFAIGINYFAIPNRLSEGGIIGLTVVT
YYLFDWSPGIVNFAINAILLAIGYKFFDKKTMVYTILGIVETSLFLYVTEHIEYHVNS
DTLLAALFAGLFVGIGLGCMFKAGGTSGGSAILAQLANQYLGWSVGKGVLIIDIVVIA
GSVFIIGQEKAMYTLVAVFIGAKVIDFIVEGMDTKTAVTIISNQPDLIREAITKNMTR
GVTVLEGRGGYTGKNKEVLYVVINKQELVKLKQVISRVDEDAFVVIHDVRDVLGGGFK
AS"
misc_feature 209195..210022
/locus_tag="BAMEG_0244"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1284"
/db_xref="CDD:31475"
misc_feature 209216..209464
/locus_tag="BAMEG_0244"
/note="Uncharacterized BCR, YitT family COG1284; Region:
DUF161; pfam02588"
/db_xref="CDD:202297"
misc_feature <209558..209749
/locus_tag="BAMEG_0244"
/note="Uncharacterized BCR, YitT family COG1284; Region:
DUF161; pfam02588"
/db_xref="CDD:202297"
misc_feature 209846..210010
/locus_tag="BAMEG_0244"
/note="Uncharacterized protein conserved in bacteria
(DUF2179); Region: DUF2179; pfam10035"
/db_xref="CDD:204383"
gene 210169..210525
/locus_tag="BAMEG_0245"
/db_xref="GeneID:7784518"
CDS 210169..210525
/locus_tag="BAMEG_0245"
/note="identified by match to protein family HMM PF06486;
match to protein family HMM TIGR01655"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812893.1"
/db_xref="GI:227812884"
/db_xref="GeneID:7784518"
/translation="MKKKMITTIIAMLVIVVMLLPTKLGPVIDKYNPFYKTKEYYTVV
NTIGQHVGDEWYEYEFIAFDERGKEQKIKKTVKHMLKRDEMLKVYAKGRYGELIEEIE
AVNIPINAKSKLLSMR"
misc_feature 210262..210483
/locus_tag="BAMEG_0245"
/note="Protein of unknown function (DUF1093); Region:
DUF1093; pfam06486"
/db_xref="CDD:148225"
gene 211097..211210
/locus_tag="BAMEG_0246"
/db_xref="GeneID:7782339"
CDS 211097..211210
/locus_tag="BAMEG_0246"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812894.1"
/db_xref="GI:227812885"
/db_xref="GeneID:7782339"
/translation="MRKEEVVKFPIKDFCSYFTVAVVCIGLFDIITNLIVK"
gene 211269..212033
/locus_tag="BAMEG_0247"
/db_xref="GeneID:7786491"
CDS 211269..212033
/locus_tag="BAMEG_0247"
/note="identified by match to protein family HMM PF01026"
/codon_start=1
/transl_table=11
/product="deoxyribonuclease TatD"
/protein_id="YP_002812895.1"
/db_xref="GI:227812886"
/db_xref="GeneID:7786491"
/translation="MKWIDSHIHVDQYKDEEKSRLLKDVENSKEIQGLIAVSMNYQSS
KEILSLAKRYSFVHPAVGFHPEQPIHKEECEKIYKLIEDHVEDIVAIGEVGLPYYLRK
EDEHIAINSYISVLQRFVELASKYDLPIVLHAVYEDADVVCDLLEKHKVSRAHFHWFK
GSETTMERMMRNGYYISITPDVLHKEKIRKIVSYYPLEYMMVETDGPWGFQEGVMTHP
GMIREVLKEISVIKNVAVDKVAETIYENTIQFYLKG"
misc_feature 211275..212021
/locus_tag="BAMEG_0247"
/note="TatD like proteins; E.coli TatD is a cytoplasmic
protein, shown to have magnesium dependent DNase activity;
Region: TatD_DNAse; cd01310"
/db_xref="CDD:30053"
misc_feature 211278..212021
/locus_tag="BAMEG_0247"
/note="Predicted metal-dependent hydrolases with the
TIM-barrel fold [General function prediction only];
Region: COG1099"
/db_xref="CDD:31296"
misc_feature order(211287..211289,211293..211295,211665..211667,
211737..211739,211881..211883)
/locus_tag="BAMEG_0247"
/note="active site"
/db_xref="CDD:30053"
gene complement(212136..213785)
/locus_tag="BAMEG_0248"
/db_xref="GeneID:7785463"
CDS complement(212136..213785)
/locus_tag="BAMEG_0248"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812896.1"
/db_xref="GI:227812887"
/db_xref="GeneID:7785463"
/translation="MKKWLLLLFSLLLLIPVPISAQKNENPKVLILYSSSDDQITSDT
QILNTQVGHFTNNITIKSIKQLAEITDKSSYTHVIYIGEKQEELPTETKEFLENFSGP
LLVLGQNIEKLSKRFSFITLKNEDINSDTIEYPTRKLKNTLEDERSIKILDTNGTILA
NALKGKNTYPLIVQQNNSYYVATPNLFDWMSHYIGEVLFSYFGQKPTNNKVEAYLRLE
DVHPAADINQLKEIAELLKEKKMPYMITVIPVYTDPETGKTLHLKDKPELVDLLRSMQ
DDGATIIMHGYTHQFYDSETGEGFEFWDVKTDQPIRQPKHEKPKTKDDFPNIEAYNTY
VKKGEEFEEKYTTDHIEKGIQELVDAKLYPVAFEAPHYTMSQKGYEILSRYFSTYVGQ
LQLSDTTWKSMHSPAYRSTPSFLNGMKLMPETVGFIEEDKPHAIAKMKANAVSVAKLS
DGVIGAFYHPYLGVKPLKEVLKDLESIPNIEWIDLQKETNEVKMKDIHITTNKDGIHV
EKPTSASDVMDYIKQYGFFLILGFLVIVFLLLLRRAKKLES"
misc_feature complement(212364..213152)
/locus_tag="BAMEG_0248"
/note="Uncharacterized protein conserved in bacteria
(DUF2334); Region: DUF2334; pfam10096"
/db_xref="CDD:150736"
misc_feature complement(212328..213149)
/locus_tag="BAMEG_0248"
/note="Catalytic NodB homology domain of the carbohydrate
esterase 4 superfamily; Region: CE4_SF; cl15692"
/db_xref="CDD:213138"
gene 214036..214569
/locus_tag="BAMEG_0249"
/db_xref="GeneID:7781937"
CDS 214036..214569
/locus_tag="BAMEG_0249"
/note="identified by match to protein family HMM PF01464"
/codon_start=1
/transl_table=11
/product="invasion protein IagB domain protein"
/protein_id="YP_002812897.1"
/db_xref="GI:227812888"
/db_xref="GeneID:7781937"
/translation="MKKFFVGFLVVLGVYLYFQGKSEGMGKLVNETSYVDSEEAKQMK
QIIIEEAKKVNLPEWIPLTIAEHESRLNPRSVGDNGTSFGLFQLHRGGGLAPDHLTDD
ELKDPRTNAQIAMPHLMKGYKRGVQKGLTDFALLKYIANTSGWPGNLGPEWTDNNMKY
NVGLEDVYYRNKGIIKE"
misc_feature 214219..214551
/locus_tag="BAMEG_0249"
/note="Lytic Transglycosylase (LT) and Goose Egg White
Lysozyme (GEWL) domain. Members include the soluble and
insoluble membrane-bound LTs in bacteria, the LTs in
bacteriophage lambda, as well as, the eukaryotic
'goose-type' lysozymes (GEWL). LTs catalyze...; Region:
LT_GEWL; cd00254"
/db_xref="CDD:29556"
misc_feature order(214237..214239,214300..214302,214384..214386,
214447..214449)
/locus_tag="BAMEG_0249"
/note="N-acetyl-D-glucosamine binding site [chemical
binding]; other site"
/db_xref="CDD:29556"
misc_feature 214237..214239
/locus_tag="BAMEG_0249"
/note="catalytic residue [active]"
/db_xref="CDD:29556"
gene complement(214585..215367)
/locus_tag="BAMEG_0250"
/db_xref="GeneID:7784278"
CDS complement(214585..215367)
/locus_tag="BAMEG_0250"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812898.1"
/db_xref="GI:227812889"
/db_xref="GeneID:7784278"
/translation="MDTQQLYFLNDIGKQKPESIRNRSAACPFCDRENLTDILATEGP
IIWLKNKFPTLKDTFQTVLIETDNCEDHIATYTEEHMRSLIRFSVKHWLDLQKNEEFK
SVILYKNHGPFSGGSLHHAHMQIIGMKYVNYLDNVEQDNFQGVIVQKNKNIELNISDR
PIIGFTEFNIIVKDIECIDEMANYIQQTVRYILTDFHKGCSSYNLFFYHVSGKIICKV
VPRFVVSPLYVGYKIPQVSTKLEDVKIQLAEYFTKRHDDPQK"
misc_feature complement(214594..215337)
/locus_tag="BAMEG_0250"
/note="Galactose-1-phosphate uridylyltransferase [Energy
production and conversion]; Region: GalT; COG1085"
/db_xref="CDD:31282"
misc_feature complement(<214975..215328)
/locus_tag="BAMEG_0250"
/note="HIT family: HIT (Histidine triad) proteins, named
for a motif related to the sequence HxHxH/Qxx (x, a
hydrophobic amino acid), are a superfamily of nucleotide
hydrolases and transferases, which act on the
alpha-phosphate of ribonucleotides. On the basis...;
Region: HIT_like; cl00228"
/db_xref="CDD:206916"
misc_feature complement(order(214996..214998,215002..215004,
215014..215016,215041..215043,215182..215184,
215218..215220,215224..215226))
/locus_tag="BAMEG_0250"
/note="nucleotide binding site/active site [active]"
/db_xref="CDD:29586"
misc_feature complement(order(214990..214998,215002..215004,
215008..215010))
/locus_tag="BAMEG_0250"
/note="HIT family signature motif; other site"
/db_xref="CDD:29586"
misc_feature complement(215002..215004)
/locus_tag="BAMEG_0250"
/note="catalytic residue [active]"
/db_xref="CDD:29586"
gene complement(215502..215624)
/locus_tag="BAMEG_0251"
/db_xref="GeneID:7782448"
CDS complement(215502..215624)
/locus_tag="BAMEG_0251"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812899.1"
/db_xref="GI:227812890"
/db_xref="GeneID:7782448"
/translation="MKKAIIVIASTAIALYTIKNRKKKHNKNDLYYPYTLLKKK"
gene 215994..216185
/locus_tag="BAMEG_0252"
/db_xref="GeneID:7786481"
CDS 215994..216185
/locus_tag="BAMEG_0252"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812900.1"
/db_xref="GI:227812891"
/db_xref="GeneID:7786481"
/translation="MGKYNKEVSIKFRTKEVNEMKRSLAARAKFLDFIYFCRAIFHDV
VVNGIRLSFFNNCIVAIER"
gene complement(216231..216359)
/locus_tag="BAMEG_0253"
/db_xref="GeneID:7784833"
CDS complement(216231..216359)
/locus_tag="BAMEG_0253"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812901.1"
/db_xref="GI:227812892"
/db_xref="GeneID:7784833"
/translation="MFPPKDFVTLFTLQIVIFRTPFNIKNHGKETFPMVFDIEKGS"
gene 216310..218190
/locus_tag="BAMEG_0254"
/db_xref="GeneID:7782784"
CDS 216310..218190
/locus_tag="BAMEG_0254"
/note="identified by match to protein family HMM PF00005"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002812902.1"
/db_xref="GI:227812893"
/db_xref="GeneID:7782784"
/translation="MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTT
IFQLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDESMTVYEVLSSAFKIEKELEREMR
TLEKDMAEEQESSVLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSF
LELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHD
RYFLDEVVTKIFDLEDGEIHVYHTNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAI
KRLREWANQANPPNEGLHKRARSMERALERMQKLKKPILERKQIGLQFEGQDRSGKDV
VVIKEVSKGFADHPLFNEVNLHVRFQERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIR
IGSSVKIGYLSQHAYGNMKSDVLEAFREYVAVTEGEARHILAKFLFYGPAVFKKVTQL
SGGEKMRLRLAQLMYQDINFLILDEPTNHLDIESREVLEEALEQYNGTILAVSHDRYF
LNKLFEKTYWIDEHKLFEFAGNYAWARQKWEERLETQVIKQQRQGRKSIETAPVKKKE
ARNIEEIETELMHVEEDIYTLECTMEHVVDIKRLEQLYEEKTKKELLRAELYNELENI
VE"
misc_feature 216310..217932
/locus_tag="BAMEG_0254"
/note="ATPase components of ABC transporters with
duplicated ATPase domains [General function prediction
only]; Region: Uup; COG0488"
/db_xref="CDD:30834"
misc_feature 216322..>216528
/locus_tag="BAMEG_0254"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
misc_feature <216787..217017
/locus_tag="BAMEG_0254"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
misc_feature 216997..217269
/locus_tag="BAMEG_0254"
/note="ABC transporter; Region: ABC_tran_2; pfam12848"
/db_xref="CDD:205105"
misc_feature 217312..217878
/locus_tag="BAMEG_0254"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
gene complement(218432..218629)
/locus_tag="BAMEG_0255"
/db_xref="GeneID:7787043"
CDS complement(218432..218629)
/locus_tag="BAMEG_0255"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812903.1"
/db_xref="GI:227812894"
/db_xref="GeneID:7787043"
/translation="MDNLFQYVLHYVLLTIMIVGALLLFPFFPKFVLFLAFFIMLGVA
IIISTREDTTQKENRVQRVKL"
gene 218730..218849
/locus_tag="BAMEG_0256"
/db_xref="GeneID:7784694"
CDS 218730..218849
/locus_tag="BAMEG_0256"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812904.1"
/db_xref="GI:227812895"
/db_xref="GeneID:7784694"
/translation="MIDMFNSKVVSAHHARIQGLQEDNYNGILLSLPKLKIEQ"
gene 219147..220838
/locus_tag="BAMEG_0257"
/db_xref="GeneID:7784018"
CDS 219147..220838
/locus_tag="BAMEG_0257"
/note="identified by match to protein family HMM PF00496"
/codon_start=1
/transl_table=11
/product="putative oligopeptide ABC transporter
oligopeptide-binding protein"
/protein_id="YP_002812905.1"
/db_xref="GI:227812896"
/db_xref="GeneID:7784018"
/translation="MLSACGGQEDTASTEPVKKQDLKDAKIESIPATDKKKSPEKANQ
RKDTFITAISKPGGVFLPYFQENGWDGNVTSVIFASLVTTDKQSKPIPDLAEKWDISA
DQLTYTFHLRKNLKFSDGSPLTADDVAFTLTLLHDKAYEGGLDIAQYAVKGGKEYKEG
KTTSIEGIQVVDPQTIKITTEKVNSQALTNLGGPVLSKAYYGKDYKQNTSLDYLKALY
GQPIAAGPYKFEKYVPGQEVRFVSNEHYYAGKPKIKNFIYKITSGDTGFQLFQTGELD
YSGFRANPENIDQLKGLEFANINLESSSDIAYIYVNNKKSYLKDKKVRQALTYGLDRK
KYVDTALQGYGSVANVPIAPVSWAYTEEGINKYPHDVEKAKKLLDEAGWKVGSDGVRE
KDGQKLKLTYYASNTGKTNDIFIPIAKESYKEIGVELNPELMDFNTMLSKVGKGDYDL
AAVSTPGISDPSEVVSEYLSTNPKSDTGYNNPKVDELIVKGIGTTDIEKRKAIYKELY
KELYKELYKELSDDPPVILLNYRKLLYAHNARIKGIDPEKYDSISSNLPVLSIEQ"
misc_feature 219288..220778
/locus_tag="BAMEG_0257"
/note="The substrate-binding domain of an ABC-type
nickel/oligopeptide-like import system contains the type 2
periplasmic binding fold; Region:
PBP2_NikA_DppA_OppA_like; cd00995"
/db_xref="CDD:173853"
misc_feature 219411..220574
/locus_tag="BAMEG_0257"
/note="Bacterial extracellular solute-binding proteins,
family 5 Middle; Region: SBP_bac_5; pfam00496"
/db_xref="CDD:201265"
gene 220947..221903
/locus_tag="BAMEG_0258"
/db_xref="GeneID:7783288"
CDS 220947..221903
/locus_tag="BAMEG_0258"
/note="identified by match to protein family HMM PF00528"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter permease"
/protein_id="YP_002812906.1"
/db_xref="GI:227812897"
/db_xref="GeneID:7783288"
/translation="MKTYIIRRFLQMIPTLFGTSIIIFFLFALLPGDYIDSNPKLTPE
RAQELRELYGLNKPIIERYFHWLVNALHGDFGFSLQYQEPVTSLLNKFIWNTFIVAVA
ALFFTWIIALIIGVISATKQHSWFDRLVTIGVFAAMSFPSFFIGLFLIKLLAVDLKLL
PIGGMIDIGSNSTGIAYILEVLRHMILPVFILTLLGVGSLTRYFRTGMLDVIRQDYIR
TARAKGLKERTVIYKHALKNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGSIQLE
ALNFRDYTVLMAFTMFLSCLTIMANFLADIVYAFVDPRIRLK"
misc_feature 220947..221897
/locus_tag="BAMEG_0258"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppB; COG0601"
/db_xref="CDD:30946"
misc_feature 221223..221840
/locus_tag="BAMEG_0258"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(221271..221276,221283..221288,221301..221303,
221334..221345,221349..221378,221427..221432,
221436..221438,221529..221534,221538..221540,
221544..221546,221553..221558,221562..221564,
221574..221579,221586..221588,221637..221639,
221679..221684,221691..221693,221712..221723,
221730..221735,221760..221765,221793..221798,
221805..221810,221814..221819,221826..221831,
221838..221840)
/locus_tag="BAMEG_0258"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(221352..221384,221427..221438,221712..221729)
/locus_tag="BAMEG_0258"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(221436..221438,221514..221516,221730..221732,
221754..221756,221763..221765,221793..221795)
/locus_tag="BAMEG_0258"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(221589..221627,221643..221648,221658..221660)
/locus_tag="BAMEG_0258"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 221916..222839
/locus_tag="BAMEG_0259"
/db_xref="GeneID:7783621"
CDS 221916..222839
/locus_tag="BAMEG_0259"
/note="identified by match to protein family HMM PF00528"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter permease"
/protein_id="YP_002812907.1"
/db_xref="GI:227812898"
/db_xref="GeneID:7783621"
/translation="METITPIIEKKKERKKRNESSPWRQAYKKIKKNKMALCGLYVLI
FMFLFSFIGPIFSPYADGKVQVTQINKPPSLSHWLGTDQLGRDILTRLMQAGRISLTI
GLASMLLSVILGALLGAIAGFYRGVVDHLIMRVADVLMSIPGLPLLIIMGAILSEWKL
PSEYRLYVVMIILSLVGWPGLARLVRGQILTLREQAFMQAADVLGLKDSRKIIHHLIP
NVFPLLIVVATLGVAGSILSESALSYLGLGVVPPTPPWGNMISAANSLIDFQKRPWLW
IPPGFAIFITVVSINLLGDALRDALDPKMRR"
misc_feature 221967..222836
/locus_tag="BAMEG_0259"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppC; COG1173"
/db_xref="CDD:31366"
misc_feature 221976..222137
/locus_tag="BAMEG_0259"
/note="N-terminal TM domain of oligopeptide transport
permease C; Region: OppC_N; pfam12911"
/db_xref="CDD:205142"
misc_feature 222204..222806
/locus_tag="BAMEG_0259"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(222249..222254,222261..222266,222279..222281,
222309..222320,222324..222353,222360..222365,
222369..222371,222441..222446,222450..222452,
222456..222458,222465..222470,222474..222476,
222486..222491,222498..222500,222549..222551,
222591..222596,222603..222605,222624..222635,
222642..222647,222687..222692,222756..222761,
222768..222773,222777..222782,222789..222794,
222801..222806)
/locus_tag="BAMEG_0259"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(222327..222371,222624..222641)
/locus_tag="BAMEG_0259"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(222369..222371,222426..222428,222642..222644,
222681..222683,222690..222692,222756..222758)
/locus_tag="BAMEG_0259"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(222501..222539,222555..222560,222570..222572)
/locus_tag="BAMEG_0259"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 222850..223830
/locus_tag="BAMEG_0260"
/db_xref="GeneID:7781906"
CDS 222850..223830
/locus_tag="BAMEG_0260"
/note="identified by match to protein family HMM PF00005;
match to protein family HMM PF08352; match to protein
family HMM TIGR01727"
/codon_start=1
/transl_table=11
/product="oligopeptide ABC transporter ATP-binding
protein"
/protein_id="YP_002812908.1"
/db_xref="GI:227812899"
/db_xref="GeneID:7781906"
/translation="MSKAVVELKDLQTHFQTEEGTVKAVNHVSFSVREGETVCVVGES
GCGKSVTALSIMGLIAESGSVVGGDILYEGKSLLGMKEKELRSLRGNDIAMIFQEPMT
SLNPVFTVGEQIVETLREHELLSKNEAYKKAIELIRKVGIARADEIVHSYPHELSGGM
LQRIMIAVALSCNPKLLIADEPTTALDVTIQAQILDLLRQIKREFKTSILLITHDLGV
VAEMADYVVVMYGGKVIEEAPVLEIFQNPKHPYTKGLLKSKPVMGKRIDKLYSIPGQV
PNLVGLDEFCYFSGRCEHCMEICKEEAPNLNVHDENHKVACWLYEERAGQ"
misc_feature 222862..223812
/locus_tag="BAMEG_0260"
/note="ABC-type dipeptide/oligopeptide/nickel transport
system, ATPase component [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppD; COG0444"
/db_xref="CDD:30793"
misc_feature 222862..223563
/locus_tag="BAMEG_0260"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature 222973..222996
/locus_tag="BAMEG_0260"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(222982..222987,222991..222999,223141..223143,
223387..223392,223489..223491)
/locus_tag="BAMEG_0260"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 223132..223143
/locus_tag="BAMEG_0260"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 223315..223344
/locus_tag="BAMEG_0260"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 223375..223392
/locus_tag="BAMEG_0260"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 223399..223410
/locus_tag="BAMEG_0260"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 223477..223497
/locus_tag="BAMEG_0260"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
misc_feature 223546..223806
/locus_tag="BAMEG_0260"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:214141"
gene 223827..224792
/locus_tag="BAMEG_0261"
/db_xref="GeneID:7783710"
CDS 223827..224792
/locus_tag="BAMEG_0261"
/note="identified by match to protein family HMM PF00005;
match to protein family HMM PF08352; match to protein
family HMM TIGR01727"
/codon_start=1
/transl_table=11
/product="oligopeptide ABC transporter ATP-binding
protein"
/protein_id="YP_002812909.1"
/db_xref="GI:227812900"
/db_xref="GeneID:7783710"
/translation="MSEPLLEVKNLKTYFPIKGGIFSRTVGHVKAVDGVSFTIKKGEV
FGLVGESGSGKTTIGKTILRLVQKTEGEVKFKGHDVHSLSKEELRKHRPNMQLVFQDP
FSSLNPRMRIGEALGEPMLAHGLATKENVREKVTEVLELCGLAPYHIDRYPHEFSGGQ
RQRIVIARAMVLNPEFIVADEPVAALDVSIQAQIINLFSELQEKKGLSYLFISHDLSV
VEHLCTKIGIMYLGTIVETAPRDELFTNPLHPYTKALLSAVPIPDPTVKRERIILEGD
IPSPANPPSGCCFHTRCPFATDICKQTVPEFRNVGEEHFVACHHV"
misc_feature 223827..224789
/locus_tag="BAMEG_0261"
/note="dipeptide transporter ATP-binding subunit;
Provisional; Region: dppF; PRK11308"
/db_xref="CDD:183084"
misc_feature 223839..224540
/locus_tag="BAMEG_0261"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature 223971..223994
/locus_tag="BAMEG_0261"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(223980..223985,223989..223997,224124..224126,
224364..224369,224466..224468)
/locus_tag="BAMEG_0261"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 224115..224126
/locus_tag="BAMEG_0261"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 224292..224321
/locus_tag="BAMEG_0261"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 224352..224369
/locus_tag="BAMEG_0261"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 224376..224387
/locus_tag="BAMEG_0261"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 224454..224474
/locus_tag="BAMEG_0261"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
misc_feature 224526..224783
/locus_tag="BAMEG_0261"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:214141"
gene complement(224831..225511)
/locus_tag="BAMEG_0262"
/db_xref="GeneID:7786965"
CDS complement(224831..225511)
/locus_tag="BAMEG_0262"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift; identified by match to protein family HMM
PF08282"
/codon_start=1
/transl_table=11
/product="HAD-superfamily hydrolase"
/protein_id="YP_002812910.1"
/db_xref="GI:227812901"
/db_xref="GeneID:7786965"
/translation="MGAIVYVDGKVINSRCLQNDKVYKLAKLLESEGFPYKLYTNKGV
YSPYTWQDQVMQAFEENKHALDVTLEELERITEKQKKSNLITDFQKIEDVVNNPELEI
SKFFILTFNAGHRAQLLSMLQEDTDIMVTASAPTNLEIMDKNGHKGNGLKQMAAHFNI
PIEDTVAIGDNFNDVPMLEAAGLSVAMGNAEEDVKKLCDVVTLTNNEHGVAHAIEQFV
LKQTSSSK"
misc_feature complement(224870..>225508)
/locus_tag="BAMEG_0262"
/note="haloacid dehalogenase-like hydrolase; Region:
Hydrolase_3; pfam08282"
/db_xref="CDD:203899"
misc_feature complement(224951..225364)
/locus_tag="BAMEG_0262"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature complement(225266..225268)
/locus_tag="BAMEG_0262"
/note="motif II; other site"
/db_xref="CDD:119389"
gene complement(225474..225704)
/locus_tag="BAMEG_0263"
/db_xref="GeneID:7786505"
CDS complement(225474..225704)
/locus_tag="BAMEG_0263"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="haloacid dehalogenase-like family hydrolase"
/protein_id="YP_002812911.1"
/db_xref="GI:227812902"
/db_xref="GeneID:7786505"
/translation="MKLIALDMDGTLLSSNLEISKENLQAIQTAKEAGHIVMICSGRA
KEDALKLLEEYKLSLPVGASNGGNCLCGWKSN"
misc_feature complement(<225504..225698)
/locus_tag="BAMEG_0263"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature complement(order(225579..225584,225678..225686))
/locus_tag="BAMEG_0263"
/note="active site"
/db_xref="CDD:119389"
misc_feature complement(225669..225686)
/locus_tag="BAMEG_0263"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature complement(225582..225584)
/locus_tag="BAMEG_0263"
/note="motif II; other site"
/db_xref="CDD:119389"
gene 225830..226006
/locus_tag="BAMEG_0264"
/db_xref="GeneID:7784485"
CDS 225830..226006
/locus_tag="BAMEG_0264"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812912.1"
/db_xref="GI:227812903"
/db_xref="GeneID:7784485"
/translation="MKDLSYFVTKVEGGMGMFRYMTVILHECYKRGFSRKCIKSRFLK
VFIKKRKKSVIKFT"
gene complement(226109..226378)
/locus_tag="BAMEG_0265"
/db_xref="GeneID:7785973"
CDS complement(226109..226378)
/locus_tag="BAMEG_0265"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812913.1"
/db_xref="GI:227812904"
/db_xref="GeneID:7785973"
/translation="MLLILLLHLPILRNHLLLLVILALSFCILLSFSFLQNFYYTNTL
DRNTINAVNTTAPLADPTKSPFVTCNTCSFILCILLFNKLSICNF"
gene 226446..226562
/locus_tag="BAMEG_0266"
/db_xref="GeneID:7786363"
CDS 226446..226562
/locus_tag="BAMEG_0266"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812914.1"
/db_xref="GI:227812905"
/db_xref="GeneID:7786363"
/translation="MKNMKEQVLQVTKGDFVGSASGAVVLTALIVFLSSVLV"
misc_feature 226458..226556
/locus_tag="BAMEG_0266"
/note="Protein of unknown function (DUF3948); Region:
DUF3948; pfam13134"
/db_xref="CDD:205315"
gene 226598..226714
/locus_tag="BAMEG_0267"
/db_xref="GeneID:7781899"
CDS 226598..226714
/locus_tag="BAMEG_0267"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812915.1"
/db_xref="GI:227812906"
/db_xref="GeneID:7781899"
/translation="MKNMKEQVLQVTKGDFVGSASGAVVLTALIVFLSSVLV"
misc_feature 226610..226708
/locus_tag="BAMEG_0267"
/note="Protein of unknown function (DUF3948); Region:
DUF3948; pfam13134"
/db_xref="CDD:205315"
gene 226748..226867
/locus_tag="BAMEG_0268"
/db_xref="GeneID:7785061"
CDS 226748..226867
/locus_tag="BAMEG_0268"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812916.1"
/db_xref="GI:227812907"
/db_xref="GeneID:7785061"
/translation="MRNMNSEQVLQVTKTDLLGSLGGAVVLTSFILFLANVLV"
misc_feature 226757..226861
/locus_tag="BAMEG_0268"
/note="Protein of unknown function (DUF3948); Region:
DUF3948; pfam13134"
/db_xref="CDD:205315"
gene 227178..228296
/gene="hppD"
/locus_tag="BAMEG_0269"
/db_xref="GeneID:7783077"
CDS 227178..228296
/gene="hppD"
/locus_tag="BAMEG_0269"
/EC_number="1.13.11.27"
/note="identified by match to protein family HMM PF00903;
match to protein family HMM TIGR01263"
/codon_start=1
/transl_table=11
/product="4-hydroxyphenylpyruvate dioxygenase"
/protein_id="YP_002812917.1"
/db_xref="GI:227812908"
/db_xref="GeneID:7783077"
/translation="MKQKSMDTLAAQMEDFFPVRDVDHLEFYVGNAKQSSYYLARAFG
FKIVAYSGLETGNREKVSYVLVQKNMRFVVSGALSSDNRIAEFVKTHGDGVKDVALLV
DDVDKAYSEAVKRGAVAIAPPVELTDENGTLKKAVIGTYGDTIHTLVERKNYKGTFMP
GFQKAEFDIPFEESGLIAVDHVVGNVEKMEEWVSYYENVMGFKQMIHFDDDDISTEYS
ALMSKVMTNGSRIKFPINEPADGKRKSQIQEYLEFYNGAGVQHLALLTNDIVKTVEAL
RANGVEFLDTPDTYYDELTARVGKIDEEIDKLKELKILVDRDDEGYLLQIFTKPIVDR
PTLFIEIIQRKGSRGFGEGNFKALFESIEREQERRGNL"
misc_feature 227235..228293
/gene="hppD"
/locus_tag="BAMEG_0269"
/note="4-hydroxyphenylpyruvate dioxygenase; Region: 4HPPD;
TIGR01263"
/db_xref="CDD:162275"
misc_feature 227241..227669
/gene="hppD"
/locus_tag="BAMEG_0269"
/note="N-terminal domain of 4-hydroxyphenylpyruvate
dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS);
Region: HPPD_N_like; cd08342"
/db_xref="CDD:176690"
misc_feature order(227274..227282,227286..227291,227358..227360,
227364..227366,227454..227456)
/gene="hppD"
/locus_tag="BAMEG_0269"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:176690"
misc_feature 227703..228269
/gene="hppD"
/locus_tag="BAMEG_0269"
/note="C-terminal domain of 4-hydroxyphenylpyruvate
dioxygenase (HppD) and hydroxymandelate Synthase (HmaS);
Region: HPPD_C_like; cd07250"
/db_xref="CDD:176673"
misc_feature order(227718..227720,227841..227843,227877..227879,
227883..227885,227913..227915,227958..227960,
228156..228158,228195..228197,228225..228227,
228237..228242)
/gene="hppD"
/locus_tag="BAMEG_0269"
/note="active site"
/db_xref="CDD:176673"
misc_feature order(227718..227720,227958..227960,228195..228197)
/gene="hppD"
/locus_tag="BAMEG_0269"
/note="Fe binding site [ion binding]; other site"
/db_xref="CDD:176673"
gene 228360..229319
/locus_tag="BAMEG_0270"
/db_xref="GeneID:7784766"
CDS 228360..229319
/locus_tag="BAMEG_0270"
/note="identified by match to protein family HMM PF01557"
/codon_start=1
/transl_table=11
/product="fumarylacetoacetate hydrolase family protein"
/protein_id="YP_002812918.1"
/db_xref="GI:227812909"
/db_xref="GeneID:7784766"
/translation="MMKFVTFRLPSKEMRAGWLEGDKVIDMNLASDGKLPSSMFAFLE
KADEYVEVLRNIKNPEKGIYSLEEVQLAAAIPNPSSIRDFYAFEQHVKTARGRRGLDV
VPEWYDIPVFYFTNHRAVIGPNDVVIGPKKSEKIDYELEIACVIGKEGRNISREQAEE
YIFGYCIMNDWSARDLQATEMKVGLGPAKGKDFATSLGAHLVTKEELDVYRNGDRYEL
EMTAHVNGKLLSKGNFQDIYYTFAEMIERASEDVTLYPGDVIGSGTVGTGCILELGTE
EWLQDGDVVELTITGLGTLRNTVKKEKEAGDEHVLSSHGGATS"
misc_feature 228417..229268
/locus_tag="BAMEG_0270"
/note="2-keto-4-pentenoate
hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
(catechol pathway) [Secondary metabolites biosynthesis,
transport, and catabolism]; Region: MhpD; COG0179"
/db_xref="CDD:30528"
misc_feature 228600..229256
/locus_tag="BAMEG_0270"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; pfam01557"
/db_xref="CDD:201859"
gene 229285..230457
/locus_tag="BAMEG_0271"
/db_xref="GeneID:7784695"
CDS 229285..230457
/locus_tag="BAMEG_0271"
/note="identified by match to protein family HMM PF04209"
/codon_start=1
/transl_table=11
/product="putative homogentisate 1,2-dioxygenase"
/protein_id="YP_002812919.1"
/db_xref="GI:227812910"
/db_xref="GeneID:7784695"
/translation="MFYRHMGELPHKRHVQFRKKDGSLYREQVMGTKGFSGTQSILYH
HYMPTEVGHAALSHSCQLQYEEDVVLSHRHFRTKENKKSGDAVSGRNFILGNEDLLIG
VVTPTEKMNYFYRNGDGDEMLFVHYGTGKIETMFGTIHYRKGDYVTIPIGTIYRVIPD
EGETKFLVVEANSQITTPRRYRNEYGQLLEHSPFCERDIRGPEKLETYDEKGEFVVMT
KSRGYMHKHVLGHHPLDVVGWDGYLYPWVFNVEDFEPITGRIHQPPPVHQTFEGHNFV
ICSFVPRLYDYHPESIPAPYYHSNVNSDEVLYYVEGNFMSRKGVEEGSITLHPSGIPH
GPHPGKTEASIGKKETLELAVMIDTFRPLRIVKQAHETEDEKYMYSWIEEGSYTVK"
misc_feature 229288..230427
/locus_tag="BAMEG_0271"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:214151"
gene 230691..231923
/locus_tag="BAMEG_0272"
/db_xref="GeneID:7786881"
CDS 230691..231923
/locus_tag="BAMEG_0272"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift; identified by match to protein family HMM
PF07690"
/codon_start=1
/transl_table=11
/product="major facilitator family transporter"
/protein_id="YP_002812920.1"
/db_xref="GI:227812911"
/db_xref="GeneID:7786881"
/translation="MKNTWRELREMDRNVWIRFIGETLNGIAMMMLMPFFALYLKDKV
DSLLQVGVIMALSPIAASFGSIIGGRIADIYGRKPIMIFSMTSNALLMLGFLFIEGFI
PYAILSVFLGLSNSLFHPAASAMVADVTAPEKRTEAYGLLRMGHNIGAAIGPIMGASV
VMLSKNLVFIIASSTMLFYALLVFVLIQETMPKSANKEEDNEKESGVVWKIVLRDKAL
MIYLLAGIIISMGFSQTEGMLPLHFDNEMKDIFGTNNPYPYLMALNGLLVVLFQFQIS
KWATDKPVGKTMLYGACLFGIGLFFIGWLPKWFGGLDTNATIILIMLLFVYAIYTLGE
MIMSPVQMTFVANLAPEHLRGTYMGAASLQWITGNAFGPLLGGVFIRSITWSLPIYNF
SYRMCSCRCCIYFFRSSR"
misc_feature 230733..231860
/locus_tag="BAMEG_0272"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 230745..231809
/locus_tag="BAMEG_0272"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature order(230775..230777,230784..230792,230796..230801,
230850..230852,230859..230864,230871..230873,
230883..230888,230892..230897,231033..231038,
231045..231050,231057..231062,231069..231071,
231105..231110,231117..231122,231138..231140,
231375..231377,231384..231389,231396..231401,
231408..231410,231459..231461,231471..231473,
231483..231485,231492..231494,231504..231506,
231681..231683,231690..231695,231702..231704,
231714..231719,231726..231728,231759..231764,
231771..231776,231783..231788,231795..231797)
/locus_tag="BAMEG_0272"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 232346..232822
/locus_tag="BAMEG_0273"
/db_xref="GeneID:7784123"
CDS 232346..232822
/locus_tag="BAMEG_0273"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift; identified by match to protein family HMM
PF01820"
/codon_start=1
/transl_table=11
/product="putative D-ala D-ala ligase"
/protein_id="YP_002812921.1"
/db_xref="GI:227812912"
/db_xref="GeneID:7784123"
/translation="MTKIKLGLLYGGKSAEHQVSLQTALAAIKALNQDKFEIHPIYIT
EQGQWIRGERIEGEVANVEVLKMSGAENAISPLSLSTEIIPSANAEENAIDVIFPLLH
GPNGEDGTVQGLLELMNIPYVGNGVLASAAGMDKVVMKNIFAEAGLKTSEICIIHS"
misc_feature 232355..232720
/locus_tag="BAMEG_0273"
/note="D-ala D-ala ligase N-terminus; Region:
Dala_Dala_lig_N; pfam01820"
/db_xref="CDD:201991"
gene 233157..233432
/locus_tag="BAMEG_0274"
/db_xref="GeneID:7785324"
CDS 233157..233432
/locus_tag="BAMEG_0274"
/codon_start=1
/transl_table=11
/product="D-alanine--D-alanine ligase"
/protein_id="YP_002812922.1"
/db_xref="GI:227812913"
/db_xref="GeneID:7785324"
/translation="MTEEESNVIKRDAIVAFQSLDGAGLTRADFFLTKDGEVYINEVN
TMPGFTPFSMFPLLWQHTGLPYPELIEELIRLAMERHEEKQKIKYTI"
misc_feature <233160..233378
/locus_tag="BAMEG_0274"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl03087"
/db_xref="CDD:207834"
gene 233493..234869
/gene="murF"
/locus_tag="BAMEG_0275"
/db_xref="GeneID:7785232"
CDS 233493..234869
/gene="murF"
/locus_tag="BAMEG_0275"
/EC_number="6.3.2.10"
/note="identified by match to protein family HMM PF01225;
match to protein family HMM PF02875; match to protein
family HMM PF08245; match to protein family HMM TIGR01143"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
alanine ligase"
/protein_id="YP_002812923.1"
/db_xref="GI:227812914"
/db_xref="GeneID:7785232"
/translation="MINRTLKQVEQMINGTGLAEQYEGITIQGVSIDTRKIEKGNLYV
PIQGERFDGHAFVDKAVENGAVATLWVKDVANPPENLPVIFVEDTLSALQMLAKNYRD
QLDVKVIGVTGSNGKTSTKDIVTSLLATKFKVQKTEGNFNNHIGLPLTILNLEENTEV
AVLEMGMSSRGEIEFLSKLARPNAAIITNIGEAHLMDLGSREAIAEAKLEIVTGLQEG
GVFVYNGDEPLLTNRVPEMNLIAETVTFGDARANDYYPTTVTLQATGTHFKMNREENI
SFYLPVLGKHNVYNTLASMAIAKYFGVTWEEMKEGLVTLQMTGMRMEIVKTDSGLTII
NDAYNASPTAMEAAFHLMNGLDGFSKKIVVLGDMLELGDQEVQFHYEVGKLIDPAKIS
YVFTYGKLGAQIAEGAKINFPNERVKAYDNKEELVKELQAVVDTKDVVLVKASRGMKL
EEVITMLK"
misc_feature 233496..234866
/gene="murF"
/locus_tag="BAMEG_0275"
/note="UDP-N-acetylmuramyl pentapeptide synthase [Cell
envelope biogenesis, outer membrane]; Region: MurF;
COG0770"
/db_xref="CDD:31113"
misc_feature 233568..233795
/gene="murF"
/locus_tag="BAMEG_0275"
/note="Mur ligase family, catalytic domain; Region:
Mur_ligase; pfam01225"
/db_xref="CDD:201670"
misc_feature 233826..234356
/gene="murF"
/locus_tag="BAMEG_0275"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature 234444..234722
/gene="murF"
/locus_tag="BAMEG_0275"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 235174..236760
/locus_tag="BAMEG_0276"
/db_xref="GeneID:7782321"
CDS 235174..236760
/locus_tag="BAMEG_0276"
/note="identified by match to protein family HMM PF00270;
match to protein family HMM PF00271"
/codon_start=1
/transl_table=11
/product="ATP-dependent RNA helicase"
/protein_id="YP_002812924.1"
/db_xref="GI:227812915"
/db_xref="GeneID:7782321"
/translation="MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIG
QAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRIL
PIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMG
FIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQF
YLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQ
AKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA
GKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIEN
ENLAYYKRIAEEMLEENDSVTVVAAALKMMTKEPDTTPIALTSEPPVVSRGGGSKKRG
GNGGGYRDGNRNRSRDGRGGDGRNRDRNRDGRNRDGNRDRNREGSRDGNRGRRGEGQG
RPGSSNGRGERKHHSRKPQA"
misc_feature 235180..236289
/locus_tag="BAMEG_0276"
/note="helicase 45; Provisional; Region: PTZ00424"
/db_xref="CDD:185609"
misc_feature 235183..235785
/locus_tag="BAMEG_0276"
/note="DEAD-box helicases. A diverse family of proteins
involved in ATP-dependent RNA unwinding, needed in a
variety of cellular processes including splicing, ribosome
biogenesis and RNA degradation. The name derives from the
sequence of the Walker B motif; Region: DEADc; cd00268"
/db_xref="CDD:28928"
misc_feature 235318..235332
/locus_tag="BAMEG_0276"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28928"
misc_feature 235624..235635
/locus_tag="BAMEG_0276"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:28928"
misc_feature 235717..235725
/locus_tag="BAMEG_0276"
/note="motif III; other site"
/db_xref="CDD:28928"
misc_feature 235813..236202
/locus_tag="BAMEG_0276"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(235915..235926,235984..235989,236062..236070)
/locus_tag="BAMEG_0276"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(236086..236088,236149..236151,236161..236163,
236170..236172)
/locus_tag="BAMEG_0276"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
gene 236857..237819
/gene="uvsE"
/locus_tag="BAMEG_0278"
/db_xref="GeneID:7784956"
CDS 236857..237819
/gene="uvsE"
/locus_tag="BAMEG_0278"
/note="identified by match to protein family HMM PF03851;
match to protein family HMM TIGR00629"
/codon_start=1
/transl_table=11
/product="putative UV damage endonuclease"
/protein_id="YP_002812925.1"
/db_xref="GI:227812916"
/db_xref="GeneID:7784956"
/translation="MLVRLGHVAMSVHLKNASPSQTMTYAQFQKIDDREAAIRKLERI
ANSNLENCLRLLKHNKGHDISFFRLSSKLIPLANHEELLEWNYIRPLKENLKVLGDYA
IRMNMRIDFHPDHFVVLNSPEENIFKQSVKTLQMHRKLLKGMGIEHKQRCVMHVGGGY
KDKELALERFIENWSNVPRGIQEMIMLENDDTTFTLEDTLYLGEKLDIPVVFDLHHHM
MNHDREDWHEDWARVVHTWESSLLPVKMHISSPREGKDPRAHADFIDVDTFLSFLKKI
KGSVPQIDCMIEAKMKDESLFQLMRDLSEQTDVEIIDGASFYIK"
misc_feature 236857..237813
/gene="uvsE"
/locus_tag="BAMEG_0278"
/note="putative UV damage endonuclease; Provisional;
Region: uvsE; PRK02308"
/db_xref="CDD:179412"
gene complement(237812..238384)
/locus_tag="BAMEG_0277"
/db_xref="GeneID:7783503"
CDS complement(237812..238384)
/locus_tag="BAMEG_0277"
/note="identified by match to protein family HMM PF01694"
/codon_start=1
/transl_table=11
/product="rhomboid family protein"
/protein_id="YP_002812926.1"
/db_xref="GI:227812917"
/db_xref="GeneID:7783503"
/translation="MLIPSARISLQPIAISLLLIQFIMIMLGDFFLFPMAAYHEYIAN
GEWWRLITSLFVHVDLQHFLSNSICLFVLGSSIEKQLGRFSFIIIFFLSGILGNIFSY
LIMPHEYIHAGASGGIFGLLGAQLFLLYSRYRSSNPKDIAIFSIMICILLLFTFFNPS
ANPISHLTGLVIGGICTPLLIKKLDGAELI"
misc_feature complement(237830..238261)
/locus_tag="BAMEG_0277"
/note="Rhomboid family; Region: Rhomboid; pfam01694"
/db_xref="CDD:201925"
gene 238477..238836
/gene="acpS"
/locus_tag="BAMEG_0279"
/db_xref="GeneID:7785840"
CDS 238477..238836
/gene="acpS"
/locus_tag="BAMEG_0279"
/EC_number="2.7.8.7"
/note="Catalyzes the formation of holo-ACP, which mediates
the essential transfer of acyl fatty acid intermediates
during the biosynthesis of fatty acids and lipids"
/codon_start=1
/transl_table=11
/product="4'-phosphopantetheinyl transferase"
/protein_id="YP_002812927.1"
/db_xref="GI:227812918"
/db_xref="GeneID:7785840"
/translation="MIVGIGIDIIELNRIEKMLDGKLKFMERILTENERNVAKGLKGS
RLTEFVAGRFAAKEAYSKAVGTGIGKEVSFLDIEVRNDDRGKPILITSTEHIVHLSIS
HSKEFAVAQVVLESSSS"
misc_feature 238477..238827
/gene="acpS"
/locus_tag="BAMEG_0279"
/note="4'-phosphopantetheinyl transferase; Provisional;
Region: acpS; PRK00070"
/db_xref="CDD:178838"
gene 238930..239943
/locus_tag="BAMEG_0280"
/db_xref="GeneID:7785253"
CDS 238930..239943
/locus_tag="BAMEG_0280"
/codon_start=1
/transl_table=11
/product="putative lipoprotein"
/protein_id="YP_002812928.1"
/db_xref="GI:227812919"
/db_xref="GeneID:7785253"
/translation="MKRRLFLVLVGLLTVFVLAGCMEKKQDDVVRDLEAKVKGLKSYQ
AEAKLSIKTGNEPQEYKVEIWHKEPSFYRVNLQNAKKDQSQIILRNEEGVFVLTPALN
KSFRFQSDWPQNSSQAYLYESLVRDILQDKKNLTFEKTDKHYIFKTKTNYQHQNMLPR
QEITLKKSDLTPVSVKLMDNDQNVLVKVDFSKVKFDAKFDKGAFDTKQNMSRAQVDVQ
TTAKEDKPFAILYPRDTPQGMTLKDEKELKTDSGKRAILTYTGSKKSFTLIQEKAKVA
EASSAISVSGELVDLGFTIGALTKDSLTWSHNGVEYMLVSKGLEPKELLMVARSVTEK
QVK"
misc_feature 239005..239541
/locus_tag="BAMEG_0280"
/note="Outer membrane lipoprotein-sorting protein [Cell
envelope biogenesis, outer membrane]; Region: LolA;
COG2834"
/db_xref="CDD:32662"
misc_feature <239554..239922
/locus_tag="BAMEG_0280"
/note="Domain of unknown function (DUF4367); Region:
DUF4367; pfam14285"
/db_xref="CDD:206453"
gene 240062..241231
/gene="dal1"
/locus_tag="BAMEG_0281"
/db_xref="GeneID:7787352"
CDS 240062..241231
/gene="dal1"
/locus_tag="BAMEG_0281"
/EC_number="5.1.1.1"
/note="identified by match to protein family HMM PF00842;
match to protein family HMM PF01168; match to protein
family HMM TIGR00492"
/codon_start=1
/transl_table=11
/product="alanine racemase"
/protein_id="YP_002812929.1"
/db_xref="GI:227812920"
/db_xref="GeneID:7787352"
/translation="MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNA
YGHDYVPVAKIALEAGATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAEND
VALTVFQKEWVDEAIKLWDGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFL
ELEGVYTHFATADEVETSYFDKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGI
TFNAVRIGIAMYGLSPSVEIRPFLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRT
KTEEWIATVAIGYADGWLRRLQGFEVLVNGKRVPIVGRVTMDQFMIHLPCEVPLGTKV
TLIGRQGDEYISATEVAEYSGTINYEIITTISFRVPRIFIRNGKVVEVINYLNDI"
misc_feature 240086..241183
/gene="dal1"
/locus_tag="BAMEG_0281"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme Alanine Racemase; Region: PLPDE_III_AR; cd00430"
/db_xref="CDD:143481"
misc_feature 240089..241183
/gene="dal1"
/locus_tag="BAMEG_0281"
/note="alanine racemase; Reviewed; Region: alr; PRK00053"
/db_xref="CDD:178827"
misc_feature order(240176..240178,240182..240184,240194..240196,
240320..240322,240452..240454,240473..240475,
240563..240565,240683..240688,240731..240742,
240869..240871,240926..240928,241007..241012,
241136..241138)
/gene="dal1"
/locus_tag="BAMEG_0281"
/note="active site"
/db_xref="CDD:143481"
misc_feature order(240176..240178,240182..240184,240194..240196,
240320..240322,240473..240475,240563..240565,
240683..240688,240731..240742,241136..241138)
/gene="dal1"
/locus_tag="BAMEG_0281"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143481"
misc_feature order(240182..240187,240260..240262,240269..240274,
240383..240388,240467..240478,240563..240565,
240569..240571,240830..240841,240845..240847,
240857..240862,240866..240874,240911..240913,
240926..240928,240944..240946,241013..241018,
241124..241129,241136..241141,241163..241165)
/gene="dal1"
/locus_tag="BAMEG_0281"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143481"
misc_feature order(240182..240184,240194..240196,240473..240475,
240563..240565,240869..240871,240926..240928,
241007..241012,241136..241138)
/gene="dal1"
/locus_tag="BAMEG_0281"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143481"
misc_feature order(240182..240184,240869..240871)
/gene="dal1"
/locus_tag="BAMEG_0281"
/note="catalytic residues [active]"
/db_xref="CDD:143481"
gene 241541..241828
/locus_tag="BAMEG_0282"
/db_xref="GeneID:7782115"
CDS 241541..241828
/locus_tag="BAMEG_0282"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812930.1"
/db_xref="GI:227812921"
/db_xref="GeneID:7782115"
/translation="MSESSVTTEIVVRLPKQMVTELDGIGKQENKNRHELICQATQLL
LRQHKTKKRYQHESMRRGYIEMGKINLGIASEAFLAEYEAAHTVERLVSGG"
misc_feature 241550..>241822
/locus_tag="BAMEG_0282"
/note="Predicted transcriptional regulators containing the
CopG/Arc/MetJ DNA-binding domain and a metal-binding
domain [Transcription]; Region: NikR; COG0864"
/db_xref="CDD:31204"
gene 241833..242183
/locus_tag="BAMEG_0283"
/db_xref="GeneID:7783446"
CDS 241833..242183
/locus_tag="BAMEG_0283"
/note="identified by match to protein family HMM PF02452"
/codon_start=1
/transl_table=11
/product="PemK family transcriptional regulator"
/protein_id="YP_002812931.1"
/db_xref="GI:227812922"
/db_xref="GeneID:7783446"
/translation="MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTVIV
AAITAQIQKAKLPTHVEIDAKKYGFERDSVILLEQIRTIDKQRLTDKITHLDEVMMIR
VDEALQISLGLIDF"
misc_feature 241842..242165
/locus_tag="BAMEG_0283"
/note="PemK-like protein; Region: PemK; pfam02452"
/db_xref="CDD:202245"
gene 242251..244419
/locus_tag="BAMEG_0284"
/db_xref="GeneID:7784177"
CDS 242251..244419
/locus_tag="BAMEG_0284"
/note="identified by match to protein family HMM PF00575;
match to protein family HMM PF09371"
/codon_start=1
/transl_table=11
/product="S1 RNA binding domain-containing protein"
/protein_id="YP_002812932.1"
/db_xref="GI:227812923"
/db_xref="GeneID:7784177"
/translation="MEMVDNRQALMKMLVKELGFTEKQVRHVIQLTEEGNTVPFIARY
RKEWTGSLDEVQIRTILERWQYIMQLEDRKEEVLRLIDEKGKLTGELRQQILKATKLQ
EVEDLYRPYKEKRRTKATIAKEKGLEPLAEWLLLYTKEDPNQKAMEFINAEKEVQSAE
EALQGAQDIIAEIVSDEAAYRSWIRNVTFRKGVMSSVVKDEEKDEKNIYEMYYDYEEP
LQKVVPHRVLAMNRGEKEDILRVSVVPPVDEIVTFLYKKVIRDNDSKSAQYVKLAIED
GYKRLIQSSIEREIRKELTETAEEQAIHIFSENLRNLLLQPPMKGKVVLAVDPAYRTG
CKLAIVDDTGKVLYIDVIYPHPPVRKYEDAKAKVLSIIDKYQVEMIAIGNGTASRESE
EFIVDVLQNVKREVFYIIVNEAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPL
AELVKIDPKSVGVGQYQHDVSQKRLNESLTFVVETAVNQVGVNVNTASVALLQYVSGL
SKTVAKNIVAKREEEGKFTKRTDLKKIPRLGAKTYEQCIGFLRILEGANPLDRTGIHP
EQYKNVELLLKSLGLSKDDVGQPQLQKSLEEVEISKLSEETGIGEPTLVDIIDALISP
ERDMRDELPKPLLKKGILKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKL
SKQYVKHPLDVVSVGQIVKVWVDDIDTKKGRVALSMLPIE"
misc_feature 242251..244407
/locus_tag="BAMEG_0284"
/note="Transcriptional accessory protein [Transcription];
Region: Tex; COG2183"
/db_xref="CDD:32366"
misc_feature 242290..242868
/locus_tag="BAMEG_0284"
/note="Tex-like protein N-terminal domain; Region: Tex_N;
pfam09371"
/db_xref="CDD:150144"
misc_feature 243214..243510
/locus_tag="BAMEG_0284"
/note="Likely ribonuclease with RNase H fold; Region:
YqgFc; smart00732"
/db_xref="CDD:128971"
misc_feature 244198..244401
/locus_tag="BAMEG_0284"
/note="S1_Tex: The C-terminal S1 domain of a transcription
accessory factor called Tex, which has been characterized
in Bordetella pertussis and Pseudomonas aeruginosa. The
tex gene is essential in Bortella pertusis and is named
for its role in toxin expression; Region: S1_Tex; cd05685"
/db_xref="CDD:88440"
misc_feature order(244222..244224,244246..244248,244276..244278,
244282..244284)
/locus_tag="BAMEG_0284"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88440"
gene 244789..245247
/locus_tag="BAMEG_0285"
/db_xref="GeneID:7784271"
CDS 244789..245247
/locus_tag="BAMEG_0285"
/note="identified by match to protein family HMM PF03926"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812933.1"
/db_xref="GI:227812924"
/db_xref="GeneID:7784271"
/translation="MDEQEIQRLVEEVSLQYFGMPFLHKAMFNSRLRTTGGRYLLNTH
NIELNYRYYEMYGKEELVGIVKHELCHYHLHITGRGYKHRDKDFRELLKAVDAPRFCK
RMVNAEKEKRVYVYECMECLLQYVRRRQINTKRYVCGKCKGKLNLIKKTS"
misc_feature 244789..245244
/locus_tag="BAMEG_0285"
/note="hypothetical protein; Provisional; Region:
PRK04351"
/db_xref="CDD:179836"
misc_feature 244789..245235
/locus_tag="BAMEG_0285"
/note="SprT homologues; Region: SprT; cl01182"
/db_xref="CDD:207338"
gene 245361..245437
/locus_tag="BAMEG_0286"
/db_xref="GeneID:7786066"
tRNA 245361..245437
/locus_tag="BAMEG_0286"
/product="tRNA-Asn"
/db_xref="GeneID:7786066"
gene 245439..245531
/locus_tag="BAMEG_0287"
/db_xref="GeneID:7785715"
tRNA 245439..245531
/locus_tag="BAMEG_0287"
/product="tRNA-Ser"
/db_xref="GeneID:7785715"
gene 245538..245614
/locus_tag="BAMEG_0288"
/db_xref="GeneID:7785743"
tRNA 245538..245614
/locus_tag="BAMEG_0288"
/product="tRNA-Glu"
/db_xref="GeneID:7785743"
gene 245618..245693
/locus_tag="BAMEG_0289"
/db_xref="GeneID:7785702"
tRNA 245618..245693
/locus_tag="BAMEG_0289"
/product="tRNA-Val"
/db_xref="GeneID:7785702"
gene 245739..245816
/locus_tag="BAMEG_0290"
/db_xref="GeneID:7785716"
tRNA 245739..245816
/locus_tag="BAMEG_0290"
/product="tRNA-Asp"
/db_xref="GeneID:7785716"
gene 245904..245978
/locus_tag="BAMEG_0291"
/db_xref="GeneID:7785727"
tRNA 245904..245978
/locus_tag="BAMEG_0291"
/product="tRNA-Gln"
/db_xref="GeneID:7785727"
gene 245984..246059
/locus_tag="BAMEG_0292"
/db_xref="GeneID:7785706"
tRNA 245984..246059
/locus_tag="BAMEG_0292"
/product="tRNA-Lys"
/db_xref="GeneID:7785706"
gene 246074..246159
/locus_tag="BAMEG_0293"
/db_xref="GeneID:7785721"
tRNA 246074..246159
/locus_tag="BAMEG_0293"
/product="tRNA-Leu"
/db_xref="GeneID:7785721"
gene 246255..246331
/locus_tag="BAMEG_0294"
/db_xref="GeneID:7785747"
tRNA 246255..246331
/locus_tag="BAMEG_0294"
/product="tRNA-Arg"
/db_xref="GeneID:7785747"
gene 246336..246412
/locus_tag="BAMEG_0295"
/db_xref="GeneID:7785754"
tRNA 246336..246412
/locus_tag="BAMEG_0295"
/product="tRNA-Pro"
/db_xref="GeneID:7785754"
gene 246414..246487
/locus_tag="BAMEG_0296"
/db_xref="GeneID:7785752"
tRNA 246414..246487
/locus_tag="BAMEG_0296"
/product="tRNA-Gly"
/db_xref="GeneID:7785752"
gene 246586..248094
/gene="rrs_5"
/locus_tag="BAMEG_0297"
/db_xref="GeneID:7785673"
rRNA 246586..248094
/gene="rrs_5"
/locus_tag="BAMEG_0297"
/product="16S ribosomal RNA"
/db_xref="GeneID:7785673"
gene 248273..251180
/gene="rrl_5"
/locus_tag="BAMEG_0299"
/db_xref="GeneID:7785664"
rRNA 248273..251180
/gene="rrl_5"
/locus_tag="BAMEG_0299"
/product="23S ribosomal RNA"
/db_xref="GeneID:7785664"
gene 251230..251345
/gene="rrf_5"
/locus_tag="BAMEG_0300"
/db_xref="GeneID:7785635"
rRNA 251230..251345
/gene="rrf_5"
/locus_tag="BAMEG_0300"
/product="5S ribosomal RNA"
/db_xref="GeneID:7785635"
gene 251357..251435
/locus_tag="BAMEG_0301"
/db_xref="GeneID:7785650"
tRNA 251357..251435
/locus_tag="BAMEG_0301"
/product="tRNA-Met"
/db_xref="GeneID:7785650"
gene 251437..251514
/locus_tag="BAMEG_0302"
/db_xref="GeneID:7785765"
tRNA 251437..251514
/locus_tag="BAMEG_0302"
/product="tRNA-Asp"
/db_xref="GeneID:7785765"
gene 251688..252161
/locus_tag="BAMEG_0303"
/db_xref="GeneID:7785687"
CDS 251688..252161
/locus_tag="BAMEG_0303"
/note="identified by match to protein family HMM PF02367;
match to protein family HMM TIGR00150"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812934.1"
/db_xref="GI:227812925"
/db_xref="GeneID:7785687"
/translation="MSKYEITTKSSEETQKLSEKLGELVRAQDVIILEGDLGAGKTTF
TKGLAKGLGVKRVVNSPTFNIIKEYKGRLPLYHMDVYRLAESEEDLGFDEYFYGEGIT
VVEWAHLIEAYLPNEKLQISLFHAGDDTRNIVLEPIGNRYIRLCEELLQDESTSN"
misc_feature 251700..252134
/locus_tag="BAMEG_0303"
/note="Predicted ATPase or kinase [General function
prediction only]; Region: COG0802"
/db_xref="CDD:31145"
gene 252142..252834
/locus_tag="BAMEG_0304"
/db_xref="GeneID:7781902"
CDS 252142..252834
/locus_tag="BAMEG_0304"
/note="identified by match to protein family HMM PF00814"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812935.1"
/db_xref="GI:227812926"
/db_xref="GeneID:7781902"
/translation="MKVLAIDTSNYVMGVSLIEEGNVIGEIITNLTKNHSVRLMPAVE
QLLKECGVKPKELTKIVVAAGPGSYTGVRIGVTAAKTLAWSLQIPIVGVSSLEVVAAN
GANFNGLISPLFDGRRGQIYTGLYTYEGEDLTSIEEDRIILIVDWLQMLKDKGKPVLF
IGNDVKLHKETIIEHLGDQAVFAPVTKNNPRPSELAFLGLQKEEQDVHSFVPSYLRLA
EAETKWLESQNK"
misc_feature 252145..252813
/locus_tag="BAMEG_0304"
/note="Glycoprotease family; Region: Peptidase_M22;
pfam00814"
/db_xref="CDD:201456"
misc_feature 252148..252789
/locus_tag="BAMEG_0304"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:214262"
gene 252848..253291
/gene="rimI"
/locus_tag="BAMEG_0305"
/db_xref="GeneID:7785054"
CDS 252848..253291
/gene="rimI"
/locus_tag="BAMEG_0305"
/EC_number="2.3.1.128"
/note="identified by match to protein family HMM PF00583;
match to protein family HMM TIGR01575"
/codon_start=1
/transl_table=11
/product="ribosomal-protein-alanine acetyltransferase"
/protein_id="YP_002812936.1"
/db_xref="GI:227812927"
/db_xref="GeneID:7785054"
/translation="MDMIFRKMELDDIAQIVAIEEASFSTPWTADAFHRELTMNEHAH
YVVLEKDGRVIGYCGLWIIIDESHITNIAILPEYRGLKLGDALLKEVISEAKTLGVKT
MTLEVRVSNEVAKQLYRKYGFQNGGIRKRYYADNQEDGLVMWVNI"
misc_feature 252881..253276
/gene="rimI"
/locus_tag="BAMEG_0305"
/note="ribosomal-protein-alanine acetyltransferase;
Region: rimI; TIGR01575"
/db_xref="CDD:162430"
misc_feature 252980..253165
/gene="rimI"
/locus_tag="BAMEG_0305"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(253061..253069,253097..253102)
/gene="rimI"
/locus_tag="BAMEG_0305"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 253291..254307
/locus_tag="BAMEG_0306"
/db_xref="GeneID:7785063"
CDS 253291..254307
/locus_tag="BAMEG_0306"
/EC_number="3.4.24.57"
/note="in most organisms, only the N-terminal domain is
present in a single polypeptide; in some archaea this
domain is fused to a kinase domain; this gene is essential
for growth in Escherichia coli and Bacillus subtilis; the
secreted glycoprotease from Pasteurella haemolytica showed
specificity for O-sialoglycosylated proteins; the
Pyrococcus structure shows DNA-binding properties,
iron-binding, ATP-binding, and AP endonuclease activity"
/codon_start=1
/transl_table=11
/product="putative DNA-binding/iron metalloprotein/AP
endonuclease"
/protein_id="YP_002812937.1"
/db_xref="GI:227812928"
/db_xref="GeneID:7785063"
/translation="MEKNTIILGIETSCDETAVAVVKNGTEIIANVVASQIESHKRFG
GVVPEIASRHHVEEITVVLEEALKEANITFDDIDAIAVTEGPGLVGALLIGVNAAKAV
AFAHDIPLVGVHHIAGHIYANRLVKEVQFPLLSLVVSGGHTELVYMKEHGSFEVIGET
RDDAAGEAYDKVARTLSMPYPGGPHIDRLAHEGKPTIDLPRAWLEPDSYDFSFSGLKS
AVINTVHNAKQRGIEIAPEDLAASFQESVIDVLVTKASRAADAYNVKQVLLAGGVAAN
KGLRARLETEFAQKENVELIIPPLSLCTDNAAMIAAAGTIAYEQGKRATLALNANPGL
DIEA"
misc_feature 253303..254301
/locus_tag="BAMEG_0306"
/note="UGMP family protein; Validated; Region: PRK09604"
/db_xref="CDD:181984"
misc_feature 253309..>253629
/locus_tag="BAMEG_0306"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:214262"
misc_feature order(253321..253332,253336..253338,253342..253344,
253633..253635,253699..253710)
/locus_tag="BAMEG_0306"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
misc_feature <253834..254187
/locus_tag="BAMEG_0306"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:214262"
gene complement(254789..256711)
/locus_tag="BAMEG_0307"
/db_xref="GeneID:7787217"
CDS complement(254789..256711)
/locus_tag="BAMEG_0307"
/note="identified by match to protein family HMM PF00005"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002812938.1"
/db_xref="GI:227812929"
/db_xref="GeneID:7787217"
/translation="MILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKST
LLKIIAGELSHDGGEIIKPKDVSMGYLAQNTGLETSLTIWDEMLTVFTHLQQMETKLR
RLEQEMGKEENFSNEATYERLLADYDQLQLDYKDQGGYQYEADIRSILSGLGFPVETH
QTTISTLSGGQKTRLALGKLLLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILI
VSHDRYFLDKLVTQVYEISNKESRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKL
EDFVQKNIARASTTKRAQSRRKQLDRMELLTRPLGDSKSASFHFDIEKQSGNDVLQVK
DATIGYDKDPIIEHVTMRLTRGDSVALVGPNGIGKSTLLKSIVNKLPLLHGDVSFGSN
VSVGYYDQEQANLTSSKRVLNELWDEYPLQPEKEIRTILGNFLFTGDDVLKPVSSLSG
GQKARLALAKLMMQKSNLLILDEPTNHLDLNSKEILENALIDYPGTLLFVSHDRYFIN
RVTTTVIELSTEGAQEYLGDYDYYVEKKNEMIERAELEQEDETPVQKTVAQEKLNYLE
EKERKKLERQRTRKIEELEQNIVQFEEEIATLEDQLCLPEIYADYEKASEITTKKQTL
QEQLDACMAEWEELHV"
misc_feature complement(255098..256711)
/locus_tag="BAMEG_0307"
/note="ATPase components of ABC transporters with
duplicated ATPase domains [General function prediction
only]; Region: Uup; COG0488"
/db_xref="CDD:30834"
misc_feature complement(<256493..256702)
/locus_tag="BAMEG_0307"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
misc_feature complement(255992..>256213)
/locus_tag="BAMEG_0307"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
misc_feature complement(255758..256012)
/locus_tag="BAMEG_0307"
/note="ABC transporter; Region: ABC_tran_2; pfam12848"
/db_xref="CDD:205105"
misc_feature complement(255158..255721)
/locus_tag="BAMEG_0307"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
gene 256899..257528
/locus_tag="BAMEG_0308"
/db_xref="GeneID:7782240"
CDS 256899..257528
/locus_tag="BAMEG_0308"
/note="modulates transcription in response to the
NADH/NAD(+) redox state"
/codon_start=1
/transl_table=11
/product="redox-sensing transcriptional repressor Rex"
/protein_id="YP_002812939.1"
/db_xref="GI:227812930"
/db_xref="GeneID:7782240"
/translation="MEQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVD
SATIRRDFSYFGALGKKGYGYNVNYLLSFFRETLDQDDITRVALIGVGNLGTAFLHYN
FTKNNNTKIEMAFDVSEEKVGTEIGGIPVYHLDELEERLSSDIQVAILTVPATVAQSV
ADRLAETNVHGILNFTPARLNVSDNIRIHHIDLAVELQTLVYFLKNYPQ"
misc_feature 256899..257525
/locus_tag="BAMEG_0308"
/note="redox-sensing transcriptional repressor Rex;
Provisional; Region: PRK05472"
/db_xref="CDD:180107"
misc_feature 256911..257057
/locus_tag="BAMEG_0308"
/note="Putative DNA-binding protein N-terminus; Region:
Put_DNA-bind_N; pfam06971"
/db_xref="CDD:203556"
misc_feature 257139..257429
/locus_tag="BAMEG_0308"
/note="CoA binding domain; Region: CoA_binding; pfam02629"
/db_xref="CDD:202320"
gene complement(257558..257749)
/locus_tag="BAMEG_0309"
/db_xref="GeneID:7784202"
CDS complement(257558..257749)
/locus_tag="BAMEG_0309"
/codon_start=1
/transl_table=11
/product="putative lipoprotein"
/protein_id="YP_002812940.1"
/db_xref="GI:227812931"
/db_xref="GeneID:7784202"
/translation="MRNSPLFMAALYFLLGCIFTHLAIRNVTDTIWNMWTILFAVMAT
IDFNLALRLILVKFTKKKQ"
misc_feature complement(257588..257701)
/locus_tag="BAMEG_0309"
/note="Domain of unknown function (DUF4305); Region:
DUF4305; pfam14146"
/db_xref="CDD:206315"
gene complement(257746..258495)
/locus_tag="BAMEG_0310"
/db_xref="GeneID:7783434"
CDS complement(257746..258495)
/locus_tag="BAMEG_0310"
/note="identified by match to protein family HMM PF02517"
/codon_start=1
/transl_table=11
/product="CAAX amino terminal protease family protein"
/protein_id="YP_002812941.1"
/db_xref="GI:227812932"
/db_xref="GeneID:7783434"
/translation="MKKQYWWVIVTYILMQLSSIAGLPLLLKTGLYDNRGFTREEKFQ
LITGHWAIISFFIALCIVLWLLRTDIRDRHLDTKRSTVPATIGWIFIGFFLAFFSQSI
AGMIEMYVLGIKPGSENTARLMDIARTTPWFLIVISIIGPILEEIVFRKILFGTLYKK
FNFFIAAIISSLVFAAIHFDFTHLLVYTAMGLVFAFLYVKTKRIIVPIAAHVAMNTLV
AIAQVLVSNEQIQEMIKEAEKMQGFIGGFLV"
misc_feature complement(257845..258105)
/locus_tag="BAMEG_0310"
/note="CAAX protease self-immunity; Region: Abi;
pfam02517"
/db_xref="CDD:202269"
gene 258896..259180
/gene="groES"
/locus_tag="BAMEG_0311"
/db_xref="GeneID:7786537"
CDS 258896..259180
/gene="groES"
/locus_tag="BAMEG_0311"
/note="10 kDa chaperonin; Cpn10; GroES; forms
homoheptameric ring; binds to one or both ends of the
GroEL double barrel in the presence of adenine nucleotides
capping it; folding of unfolded substrates initiates in a
GroEL-substrate bound and capped by GroES; release of the
folded substrate is dependent on ATP binding and
hydrolysis in the trans ring"
/codon_start=1
/transl_table=11
/product="co-chaperonin GroES"
/protein_id="YP_002812942.1"
/db_xref="GI:227812933"
/db_xref="GeneID:7786537"
/translation="MLKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGT
GRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVIG"
misc_feature 258896..259174
/gene="groES"
/locus_tag="BAMEG_0311"
/note="Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10
cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase,
to assist the folding and assembly of proteins and is
found in eubacterial cytosol, as well as in the matrix of
mitochondria and chloroplasts. It...; Region: cpn10;
cd00320"
/db_xref="CDD:73192"
misc_feature order(258896..258898,258902..258904,258908..258910,
258917..258919,258998..259003,259064..259066,
259094..259096,259109..259111,259115..259117,
259163..259171)
/gene="groES"
/locus_tag="BAMEG_0311"
/note="oligomerisation interface [polypeptide binding];
other site"
/db_xref="CDD:73192"
misc_feature 258944..258985
/gene="groES"
/locus_tag="BAMEG_0311"
/note="mobile loop; other site"
/db_xref="CDD:73192"
misc_feature order(259025..259027,259058..259060)
/gene="groES"
/locus_tag="BAMEG_0311"
/note="roof hairpin; other site"
/db_xref="CDD:73192"
gene 259219..260853
/gene="groEL"
/locus_tag="BAMEG_0312"
/db_xref="GeneID:7786114"
CDS 259219..260853
/gene="groEL"
/locus_tag="BAMEG_0312"
/note="60 kDa chaperone family; promotes refolding of
misfolded polypeptides especially under stressful
conditions; forms two stacked rings of heptamers to form a
barrel-shaped 14mer; ends can be capped by GroES;
misfolded proteins enter the barrel where they are
refolded when GroES binds; many bacteria have multiple
copies of the groEL gene which are active under different
environmental conditions; the B.japonicum protein in this
cluster is expressed constitutively; in Rhodobacter,
Corynebacterium and Rhizobium this protein is essential
for growth"
/codon_start=1
/transl_table=11
/product="chaperonin GroEL"
/protein_id="YP_002812943.1"
/db_xref="GI:227812934"
/db_xref="GeneID:7786114"
/translation="MAKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFG
SPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREG
LKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAADEEVGQLI
AEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYI
LITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKA
PGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGV
GSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLVGGVAVIKVGAATETELKERKL
RIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASIVAEGDEATGINIVLRALEEPVRQ
IAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVA
AMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMGGMM"
misc_feature 259219..260805
/gene="groEL"
/locus_tag="BAMEG_0312"
/note="chaperonin GroEL; Reviewed; Region: groEL;
PRK12849"
/db_xref="CDD:183791"
misc_feature 259225..260778
/gene="groEL"
/locus_tag="BAMEG_0312"
/note="GroEL_like type I chaperonin. Chaperonins are
involved in productive folding of proteins. They share a
common general morphology, a double toroid of 2 stacked
rings, each composed of 7-9 subunits. The symmetry of type
I is seven-fold and they are found...; Region: GroEL;
cd03344"
/db_xref="CDD:48161"
misc_feature order(259225..259227,259237..259239,259288..259290,
259321..259332,259336..259338,259351..259356,
259360..259362,259390..259392,259396..259398,
259420..259422,259432..259434,259441..259443,
259801..259803,259897..259899,259981..259983,
260362..260364,260368..260370,260584..260586,
260746..260748,260755..260775)
/gene="groEL"
/locus_tag="BAMEG_0312"
/note="ring oligomerisation interface [polypeptide
binding]; other site"
/db_xref="CDD:48161"
misc_feature order(259306..259314,259474..259476,259486..259488,
259663..259665,260404..260406,260455..260457,
260569..260571,260686..260688,260692..260694)
/gene="groEL"
/locus_tag="BAMEG_0312"
/note="ATP/Mg binding site [chemical binding]; other site"
/db_xref="CDD:48161"
misc_feature order(259540..259542,260509..260511,260563..260565,
260590..260592,260596..260601,260608..260610)
/gene="groEL"
/locus_tag="BAMEG_0312"
/note="stacking interactions; other site"
/db_xref="CDD:48161"
misc_feature order(259636..259638,259768..259770,259789..259791,
260335..260337,260437..260442)
/gene="groEL"
/locus_tag="BAMEG_0312"
/note="hinge regions; other site"
/db_xref="CDD:48161"
misc_binding 260994..261096
/note="Purine riboswitch"
/bound_moiety="guanine and/or adenine"
gene 261252..262799
/gene="guaA"
/locus_tag="BAMEG_0314"
/db_xref="GeneID:7784821"
CDS 261252..262799
/gene="guaA"
/locus_tag="BAMEG_0314"
/EC_number="6.3.5.2"
/note="contains glutamine-hydrolyzing domain and glutamine
amidotransferase; GMP-binding domain; functions to produce
GMP from XMP in the IMP pathway"
/codon_start=1
/transl_table=11
/product="GMP synthase"
/protein_id="YP_002812944.1"
/db_xref="GI:227812935"
/db_xref="GeneID:7784821"
/translation="MIILKKQHDTIIVLDFGSQYNQLIARRIREFGVYSELHPHTITA
EEIKAMNPKGIIFSGGPNSVYGEGALHCDEKIFDLGLPIFGICYGMQLMTQQFGGTVE
RANHREYGKAVLKVENESKLYANLPEEQVVWMSHGDLVTGLPEGFVVDATSESCPIAG
MSNEAKNLYGVQFHPEVRHSEHGNDLIKNFVFGVCGCSEGWNMENFIEVELEKIRETV
GDKKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAEGVMKTFSEGFHM
NVIKVDAKERFMNKLKGVEDPEQKRKIIGNEFIYVFDDEASKLEGMDFLAQGTLYTDI
VESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSELGIPDEIVWRQP
FPGPGLGIRVLGEITEEKLEIVRESDAILREEIIKAGLDREIWQYFTALPGMRSVGVM
GDERTYDYTVGIRAVTSIDGMTADWARIPWDVLEKISVRIVNEVKHVNRIVYDVTSKP
PATIEWE"
misc_feature 261267..262796
/gene="guaA"
/locus_tag="BAMEG_0314"
/note="GMP synthase; Reviewed; Region: guaA; PRK00074"
/db_xref="CDD:178842"
misc_feature 261282..261824
/gene="guaA"
/locus_tag="BAMEG_0314"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in GMP synthetase; Region: GATase1_GMP_Synthase;
cd01742"
/db_xref="CDD:153213"
misc_feature order(261303..261308,261426..261434,261510..261515,
261654..261656,261771..261773)
/gene="guaA"
/locus_tag="BAMEG_0314"
/note="AMP/PPi binding site [chemical binding]; other
site"
/db_xref="CDD:153213"
misc_feature order(261429..261431,261513..261515)
/gene="guaA"
/locus_tag="BAMEG_0314"
/note="candidate oxyanion hole; other site"
/db_xref="CDD:153213"
misc_feature order(261510..261512,261771..261773,261777..261779)
/gene="guaA"
/locus_tag="BAMEG_0314"
/note="catalytic triad [active]"
/db_xref="CDD:153213"
misc_feature order(261522..261524,261657..261659,261765..261767)
/gene="guaA"
/locus_tag="BAMEG_0314"
/note="potential glutamine specificity residues [chemical
binding]; other site"
/db_xref="CDD:153213"
misc_feature 261915..262793
/gene="guaA"
/locus_tag="BAMEG_0314"
/note="The C-terminal domain of GMP synthetase. It
contains two subdomains; the ATP pyrophosphatase domain
which closes to the N-termial and the dimerization domain
at C-terminal end. The ATP-PPase is a twisted,
five-stranded parallel beta-sheet sandwiched...; Region:
GMP_synthase_C; cd01997"
/db_xref="CDD:30184"
misc_feature order(261915..261989,261993..262025,262029..262061,
262092..262205,262221..262265,262287..262316,
262329..262403,262419..262463)
/gene="guaA"
/locus_tag="BAMEG_0314"
/note="ATP Binding subdomain [chemical binding]; other
site"
/db_xref="CDD:30184"
misc_feature order(261927..261935,261939..261950,262002..262004,
262008..262010,262362..262364)
/gene="guaA"
/locus_tag="BAMEG_0314"
/note="Ligand Binding sites [chemical binding]; other
site"
/db_xref="CDD:30184"
misc_feature order(262488..262526,262551..262580,262587..262619,
262629..262676,262695..262721,262725..262793)
/gene="guaA"
/locus_tag="BAMEG_0314"
/note="Dimerization subdomain; other site"
/db_xref="CDD:30184"
misc_binding 262954..263056
/note="Purine riboswitch"
/bound_moiety="guanine and/or adenine"
gene 263184..264509
/locus_tag="BAMEG_0316"
/db_xref="GeneID:7782827"
CDS 263184..264509
/locus_tag="BAMEG_0316"
/note="identified by match to protein family HMM PF00860"
/codon_start=1
/transl_table=11
/product="xanthine/uracil permease family protein"
/protein_id="YP_002812945.1"
/db_xref="GI:227812936"
/db_xref="GeneID:7782827"
/translation="MKRYFQFDELGTNYKTEFIAGLTTFLSMAYVLFVNPATLSLGNV
KGLPAGTGMDPGAVFVATALAAAIGSLIMGIFAKYPIALAPGMGINAFFAYTAVLTMG
IPWQTAIAGTLMSGIIFIILTASGIREKIINAIPSELKFAVAAGIGLFIAFLGFQNAG
IIVKNDAVLVGLGDLTKGTTLLAIFGVVTTIIFMIKKVNGAVFYGMILTAILGVATGL
IDTPKAVVGAIPSLEPTFGAALTHFGDIFTVQMGIVIITFFFIDFFDTAGTLVAVANQ
AGLMKNNKLPRAGKALFADAIATVIGAILGTSTTTSYIESSAGVAAGGRSGFTAVVTA
GFFLLALFFSPLLSVVTPAVTAPALIIVGILMVSSLGEIDWKKFEIAVPAFFTIISMP
LTYSIATGIAIGFIFYPITMVVSGRRKEIHPIMYVMGVLFVLYFIYVRK"
misc_feature 263184..264500
/locus_tag="BAMEG_0316"
/note="Xanthine/uracil/vitamin C permease [Nucleotide
transport and metabolism]; Region: COG2252"
/db_xref="CDD:32433"
gene 264654..265355
/locus_tag="BAMEG_0317"
/db_xref="GeneID:7785584"
CDS 264654..265355
/locus_tag="BAMEG_0317"
/note="identified by match to protein family HMM PF00072;
match to protein family HMM PF00486"
/codon_start=1
/transl_table=11
/product="DNA-binding response regulator"
/protein_id="YP_002812946.1"
/db_xref="GI:227812937"
/db_xref="GeneID:7785584"
/translation="MAHETILVVDDEKEIRNLITIYLKNEGYKVLQAGDGEEGLRLLE
ENEVHLVVLDIMMPKVDGIHMCMKIREEKEMPIIMLSAKTQDMDKILGLTTGADDYVT
KPFNPLELIARIKSQLRRYMKMNGFAIQNEDELEIGEMKINISTHKVIVEGEEVKLTP
REFSILELLARNPGMVFSAEQIYEKVWNERSFQSDNTVMVHIRKVREKIEENPRKPRY
IKTVWGVGYKIEKDI"
misc_feature 264669..265349
/locus_tag="BAMEG_0317"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature 264672..265007
/locus_tag="BAMEG_0317"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(264681..264686,264813..264815,264837..264839,
264894..264896,264951..264953,264960..264965)
/locus_tag="BAMEG_0317"
/note="active site"
/db_xref="CDD:29071"
misc_feature 264813..264815
/locus_tag="BAMEG_0317"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(264822..264827,264831..264839)
/locus_tag="BAMEG_0317"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 264960..264968
/locus_tag="BAMEG_0317"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 265056..265340
/locus_tag="BAMEG_0317"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature order(265128..265130,265185..265190,265242..265244,
265251..265253,265275..265280,265314..265316,
265329..265331)
/locus_tag="BAMEG_0317"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 265387..266844
/locus_tag="BAMEG_0318"
/db_xref="GeneID:7784634"
CDS 265387..266844
/locus_tag="BAMEG_0318"
/EC_number="2.7.13.3"
/note="identified by match to protein family HMM PF00512;
match to protein family HMM PF00672; match to protein
family HMM PF02518"
/codon_start=1
/transl_table=11
/product="sensor histidine kinase"
/protein_id="YP_002812947.1"
/db_xref="GI:227812938"
/db_xref="GeneID:7784634"
/translation="MIEKLVKGVRKSIRIQLITTFAACALLGVFFAKGAAPFFENANR
QATIDYRAGMEQINHEAQRAANSSVHENKLEAISNMIEMENQNLERGSRALKILVTDE
SGKVLYKTKQAQEEQIDLHNTIRNAASFAINYSNGRDVFENTRKEFIAFSPITIEDKN
LYMFVSGIPDGVVMYDTQEGPFPFLIGVLVFIFSFFYITKRKMKQIEAMAEGVKEIEK
GNLAYRIEKKGEDEIASLTENINNMAEELMNNIEKERKLEKQKNELITNVSHDLRTPL
TSIMGYLRLLRDSKYENKEQHDEYTRIAFAKSEQLKNLIEDLFEYTKLTNEQVVLEKQ
EVCVNELLEQLIEELVPQAEEHGLTFVKKFPEERAYAAIDSEKMVRVFDNLLMNAIKY
SKDDGEIKVSLQRQRWEIQIVIANHSEEFTREELASLFERFYKKDQSRSRVTEGSGLG
LAIAKSIVELQGGSIRAECKDGIIQFIVSLPIIER"
misc_feature 265993..266127
/locus_tag="BAMEG_0318"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature order(265993..265995,266002..266007,266011..266016,
266023..266028,266032..266034,266080..266085,
266089..266094,266101..266106,266110..266115,
266122..266127)
/locus_tag="BAMEG_0318"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature 266158..266355
/locus_tag="BAMEG_0318"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(266176..266178,266188..266190,266200..266202,
266209..266211,266221..266223,266230..266232,
266284..266286,266296..266298,266305..266307,
266317..266319,266326..266328,266338..266340)
/locus_tag="BAMEG_0318"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 266194..266196
/locus_tag="BAMEG_0318"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 266518..266802
/locus_tag="BAMEG_0318"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(266536..266538,266548..266550,266557..266559,
266626..266628,266632..266634,266638..266640,
266644..266649,266728..266739,266785..266787,
266791..266793)
/locus_tag="BAMEG_0318"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 266548..266550
/locus_tag="BAMEG_0318"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(266638..266640,266644..266646,266728..266730,
266734..266736)
/locus_tag="BAMEG_0318"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 267165..268673
/gene="rrs_6"
/locus_tag="BAMEG_0319"
/db_xref="GeneID:7786071"
rRNA 267165..268673
/gene="rrs_6"
/locus_tag="BAMEG_0319"
/product="16S ribosomal RNA"
/db_xref="GeneID:7786071"
gene 268852..271759
/gene="rrl_6"
/locus_tag="BAMEG_0321"
/db_xref="GeneID:7785659"
rRNA 268852..271759
/gene="rrl_6"
/locus_tag="BAMEG_0321"
/product="23S ribosomal RNA"
/db_xref="GeneID:7785659"
gene 271809..271924
/gene="rrf_6"
/locus_tag="BAMEG_0322"
/db_xref="GeneID:7785638"
rRNA 271809..271924
/gene="rrf_6"
/locus_tag="BAMEG_0322"
/product="5S ribosomal RNA"
/db_xref="GeneID:7785638"
gene complement(272062..273015)
/locus_tag="BAMEG_0323"
/db_xref="GeneID:7785658"
CDS complement(272062..273015)
/locus_tag="BAMEG_0323"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
premature stop"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812948.1"
/db_xref="GI:227812939"
/db_xref="GeneID:7785658"
/translation="MKIIAFYLPQFHQIKENDRWWGKGFTEWTNTKSARPLFSKHYQP
REPYQDFYYDLTDPSVRKWQAEIAKAHGIYGFCYYHYWFKGKRLLETPFNEVLKTGEP
DFPFCLSWANEPWTKTWDGLDSHILMPQNYGELSDWKEHFDYLLQAFQDERYIRIDDK
PLFIIYRPGHIPDCEQMLNYWNILAQENGLKGIYFVETLNSFPLPNIHGFDASIQFEP
FYTIAHDSSSDINKTIYESGKQINAWDYDKVWMYILKRSPSEKKTFPGAFVDWDNTAR
RKDLNSSIFLGSTPEKFTIYLSKQIYRTYSLYNSEFLFMNA"
misc_feature complement(272065..273015)
/locus_tag="BAMEG_0323"
/note="Glycosyl hydrolase family 99-like domain of
WbsX-like glycosyltransferases; Region: Glyco_tran_WbsX;
cd11579"
/db_xref="CDD:211420"
misc_feature complement(order(272203..272205,272368..272370,
272518..272520,272683..272685,272773..272775,
272935..272937,272944..272946,272986..272988,
272992..272994))
/locus_tag="BAMEG_0323"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:211420"
gene complement(273248..273877)
/locus_tag="BAMEG_0324"
/db_xref="GeneID:7785035"
CDS complement(273248..273877)
/locus_tag="BAMEG_0324"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift; identified by match to protein family HMM
PF08241; match to protein family HMM PF08242"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812949.1"
/db_xref="GI:227812940"
/db_xref="GeneID:7785035"
/translation="MNKERKILDFGCGWGRIIRFFFKDIRDENLLGIDVDPAMINICN
ETLGRGIYKTANPQPPVEFISDNSLDIIFAYSVFSHLSEETAEHWIKEFSRILRPGGI
FIATTQARYFLDYCQQFKEHPEFIQTGWHKTLSQAFPDINRAISDYESGNFVHSPTGA
GNVRNSRFYGETVIPRTYIKNHYEKYLKLRDFFDDVNRLPQALFVLQKD"
misc_feature complement(273560..273862)
/locus_tag="BAMEG_0324"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(273653..273655,273773..273778,
273830..273850))
/locus_tag="BAMEG_0324"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(274148..274870)
/locus_tag="BAMEG_0325"
/db_xref="GeneID:7787206"
CDS complement(274148..274870)
/locus_tag="BAMEG_0325"
/note="identified by match to protein family HMM PF08241"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812950.1"
/db_xref="GI:227812941"
/db_xref="GeneID:7787206"
/translation="MEGNLKHNNGYCVICEKEATFIEHNDWLRDHYLCSTCHSIPRQR
ALVHVLNTLFPKWDSYHIHESSPGGITTQLLIKNCKNYTYSQYFKNYPLGQYFQGIRC
ENLENMTFQNESFDLFITQDVFEHVMEPEKAFKEIERVLKPGGAHVFTVPWYPTLPKT
LQRARNNKDGIEYMEEPIYHGNPIDEKGALVTFDWGQDMIEYIYTHANMYTIVYLQKD
RSLGLDAEFLHVFISKKHEHNF"
misc_feature complement(274409..274678)
/locus_tag="BAMEG_0325"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(274508..274510,274559..274567,
274664..274678))
/locus_tag="BAMEG_0325"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(275174..275968)
/locus_tag="BAMEG_0326"
/db_xref="GeneID:7783938"
CDS complement(275174..275968)
/locus_tag="BAMEG_0326"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812951.1"
/db_xref="GI:227812942"
/db_xref="GeneID:7783938"
/translation="MKNINQKFLEYIILHKDRIPHFHKDFPLILFWSHRSGCTALANW
FFFQIGLFPEAKKYNDFIHYYEFWVYKNNPNYIQAVHSGLLEAKKHVCKLVRNPYTRA
VSSFLLLADNPYASPQWDSIRKCFYNDKHSKQGISFKQFLYYVQTLGSNSQVIDMHFS
QQYVQGEEAFIQSYIPLEDFNKQIPKTENEYGLIKSDLTKLTSSGHHRAHKMVYTGSY
AELSITDEAFPRFPTYASFYDKETMDLVTEIYAKDFEMYPYTKGIF"
misc_feature complement(275192..>275689)
/locus_tag="BAMEG_0326"
/note="Sulfotransferase family; Region: Sulfotransfer_2;
pfam03567"
/db_xref="CDD:202686"
gene 276400..277173
/locus_tag="BAMEG_0327"
/db_xref="GeneID:7783356"
CDS 276400..277173
/locus_tag="BAMEG_0327"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift; identified by match to protein family HMM
PF01370"
/codon_start=1
/transl_table=11
/product="UDP-glucose 4-epimerase"
/protein_id="YP_002812952.1"
/db_xref="GI:227812943"
/db_xref="GeneID:7783356"
/translation="MLKIYIALANVDIIIYLAATSNVATSIEDVFGDINSSFFFLNFM
ESVKNFPIKKIVLASSGGTVYGEPEYLPIDEDHPLKPLSPYGITKVSLENYLYFYKKK
YGIDYVVCRYSNPYGKYQNPLKKVGAINCFLYQHLSNERINIYGNPQEIIRDYIYIDD
LVEITIQLSQLNRLKSCVYNIGSGKGLSLKRIIVELEKLTERKVDFICYKQKQENVQK
IILNIDRVRRECNWEPKVDFKSGIRLNKLWIEEFLYSKK"
misc_feature 276409..277146
/locus_tag="BAMEG_0327"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:214164"
misc_feature <276433..277164
/locus_tag="BAMEG_0327"
/note="Nucleoside-diphosphate-sugar epimerases [Cell
envelope biogenesis, outer membrane / Carbohydrate
transport and metabolism]; Region: WcaG; COG0451"
/db_xref="CDD:30800"
misc_feature order(276448..276456,276571..276579,276652..276654,
276664..276666,276733..276744)
/locus_tag="BAMEG_0327"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(276496..276498,276577..276579,276652..276654,
276664..276666)
/locus_tag="BAMEG_0327"
/note="active site"
/db_xref="CDD:187535"
gene complement(277214..277987)
/locus_tag="BAMEG_0328"
/db_xref="GeneID:7783623"
CDS complement(277214..277987)
/locus_tag="BAMEG_0328"
/note="identified by match to protein family HMM PF08241;
match to protein family HMM PF08242"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812953.1"
/db_xref="GI:227812944"
/db_xref="GeneID:7783623"
/translation="MKEFIETNKDLISQIAQNYNVNASIHPEDHIFQFLVTNPVFPSK
KEAIDYYFKDGRKSAETLLDLMTSFYPPVDTPIKLLEFASGYGCVTRHLLNLQTNLRI
TACDIHEEAITFLERTLHTSSILSHPEPEQIKLSSTYDIVFGLSFFSHMPDTTWFRWL
QTLYNAVSPGGLFIFTTHGYQSKKYFGFPDLNKQGYWFLPSSEQLDLDVHQYGQTIVS
PSYVCDKIKLLPYNPIIKKYTEGFWWEHQDLWVIQKEIK"
misc_feature complement(277349..277825)
/locus_tag="BAMEG_0328"
/note="Methyltransferase domain; Region: Methyltransf_23;
pfam13489"
/db_xref="CDD:205667"
misc_feature complement(277460..277756)
/locus_tag="BAMEG_0328"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(277553..277555,277616..277624,
277667..277672,277724..277744))
/locus_tag="BAMEG_0328"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(278055..278489)
/locus_tag="BAMEG_0329"
/db_xref="GeneID:7786135"
CDS complement(278055..278489)
/locus_tag="BAMEG_0329"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
premature stop"
/codon_start=1
/transl_table=11
/product="family 2 glycosyl transferase"
/protein_id="YP_002812954.1"
/db_xref="GI:227812945"
/db_xref="GeneID:7786135"
/translation="MANHYLDYTNDIDKEKWQSSYVRKGIDEIQDTLLIKNTIPNVSS
VVFKNIDIKTTAKQLEKFKIASDWFFYVSILKEGNIYFNPKPLNYHRRHKNSVTRAED
SYSHYSEVVQMQNFIKETFTIDDISKKKMYAYRKYLKAYLKV"
misc_feature complement(278196..>278468)
/locus_tag="BAMEG_0329"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:214173"
misc_feature complement(278655..279985)
/note="potential frameshift: common BLAST hit:
gi|49183297|ref|YP_026549.1| glycosyl transferase, group 1
family protein"
gene complement(278655..279398)
/locus_tag="BAMEG_0330"
/db_xref="GeneID:7782616"
CDS complement(278655..279398)
/locus_tag="BAMEG_0330"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain
one or more premature stops and/or frameshifts; identified
by match to protein family HMM PF00534"
/codon_start=1
/transl_table=11
/product="glycoside hydrolase family protein"
/protein_id="YP_002812955.1"
/db_xref="GI:227812946"
/db_xref="GeneID:7782616"
/translation="MGVGFADHRKGIDLFSLIAYSVRKIHKNIHFIWVGKTDVHFLNT
LSQRYTAHFTLVEPTPDIGLYNAGADLYLLTSREDPFPNVVLEALDTKVPVIGFKNAG
GFGDVVTEQTGALVDYLNLPMMLEKIYEFIGDEDLRLQKGTFGQELIEKNFNFLHYIY
QLLNLLEHNYKKISVIVPNYNYEKYLSERVKSILNQTYPLYELIFLDDASTDNSVSIF
EKLLSNENKHHLKIQQIINDKNSGSVFKQ"
misc_feature complement(278898..>279392)
/locus_tag="BAMEG_0330"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region:
Glycosyltransferase_GTB_type; cl10013"
/db_xref="CDD:212618"
misc_feature complement(278898..>279392)
/locus_tag="BAMEG_0330"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature complement(<278673..278894)
/locus_tag="BAMEG_0330"
/note="Glycosyltransferases involved in cell wall
biogenesis [Cell envelope biogenesis, outer membrane];
Region: WcaA; COG0463"
/db_xref="CDD:30811"
misc_feature complement(<278673..278876)
/locus_tag="BAMEG_0330"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cd00761"
/db_xref="CDD:132997"
misc_feature complement(order(278781..278783,278859..278861,
278865..278867))
/locus_tag="BAMEG_0330"
/note="active site"
/db_xref="CDD:132997"
gene complement(279413..279985)
/locus_tag="BAMEG_0331"
/db_xref="GeneID:7784546"
CDS complement(279413..279985)
/locus_tag="BAMEG_0331"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="glycoside hydrolase family protein"
/protein_id="YP_002812956.1"
/db_xref="GI:227812947"
/db_xref="GeneID:7784546"
/translation="MHVNKKIIYVSHDAHFHGAQLLSLHTIKALKENFHYSVAIISIR
TGILIHDFQKYGPVYCLEEDYPTENKVESLIKKLLSQDYTIAICSTVISGDIVALLAK
HNIKVISLIHELPHLIQQYSAEGKARKIAESAHKIVFPSQYVYEKFHTITQLDHQKCH
ILPQGLFNHNPYKNNIAKARNELRKNTTCL"
misc_feature complement(<279437..279970)
/locus_tag="BAMEG_0331"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region:
Glycosyltransferase_GTB_type; cl10013"
/db_xref="CDD:212618"
gene 280463..281971
/gene="rrs_7"
/locus_tag="BAMEG_0332"
/db_xref="GeneID:7783950"
rRNA 280463..281971
/gene="rrs_7"
/locus_tag="BAMEG_0332"
/product="16S ribosomal RNA"
/db_xref="GeneID:7783950"
gene 282150..285057
/gene="rrl_7"
/locus_tag="BAMEG_0334"
/db_xref="GeneID:7785660"
rRNA 282150..285057
/gene="rrl_7"
/locus_tag="BAMEG_0334"
/product="23S ribosomal RNA"
/db_xref="GeneID:7785660"
gene 285108..285223
/gene="rrf_7"
/locus_tag="BAMEG_0335"
/db_xref="GeneID:7785636"
rRNA 285108..285223
/gene="rrf_7"
/locus_tag="BAMEG_0335"
/product="5S ribosomal RNA"
/db_xref="GeneID:7785636"
gene complement(285674..286471)
/gene="bacA1"
/locus_tag="BAMEG_0336"
/db_xref="GeneID:7785643"
CDS complement(285674..286471)
/gene="bacA1"
/locus_tag="BAMEG_0336"
/EC_number="2.7.1.66"
/note="BacA; phosphatase activity in Escherichia coli not
kinase; involved in bacitracin resistance as bacitracin
supposedly sequesters undecaprenyl disphosphate which
reduces the pool of lipid carrier available to the cell"
/codon_start=1
/transl_table=11
/product="UDP pyrophosphate phosphatase"
/protein_id="YP_002812957.1"
/db_xref="GI:227812948"
/db_xref="GeneID:7785643"
/translation="MSDIITAFILGIVEGLAEFLPISSTGHLILVGHLLGFEGERAKT
FEIVIQLGAILAIAILYHKRLVSLCNLKPLLRKEKKFNAFHVFLGVFPAVVAGLLLHD
VIKTYLFQPYTVVIGLVAGAILMIFAEVKKQEATSYSLDDLTYRQALTIGLFQCLAVY
PGFSRAGSTISGGLLAKVNYKTASEFSFLIALPVMVGATGLDLLKSWTYLSVDDIPMF
AVGFITSFIVAMLAVVTFLKLLEKIGLKPFAYYRILLAILFTVFVLL"
misc_feature complement(285677..286471)
/gene="bacA1"
/locus_tag="BAMEG_0336"
/note="undecaprenyl pyrophosphate phosphatase; Reviewed;
Region: PRK00281"
/db_xref="CDD:178958"
gene complement(286489..287226)
/locus_tag="BAMEG_0337"
/db_xref="GeneID:7783587"
CDS complement(286489..287226)
/locus_tag="BAMEG_0337"
/codon_start=1
/transl_table=11
/product="putative bacitracin ABC transporter, permease
protein"
/protein_id="YP_002812958.1"
/db_xref="GI:227812949"
/db_xref="GeneID:7783587"
/translation="MVNLFYTELLKLKRSNMFLISIIGAGVAPFLVVVASYIHIKTKQ
PTPTIWFHQLFTEVNLYTTLVIGFPLYGVVVAYLFTREYAEDTLKNLLTIPVSRISFI
ISKFIILFLWIMMLTLVAWSLTLILGLLGNFPGFNTTLLLGSFLKFLICGGLLFLLSS
PIVLLTLVMKSYVPPIILTVIITMTNLMLVNSKHKDLFPWTATLDIANNELQPTYPPE
YSYIIIVTTAIFGFIATLFYFKRVDIH"
misc_feature complement(286510..287205)
/locus_tag="BAMEG_0337"
/note="ABC-2 family transporter protein; Region:
ABC2_membrane_4; pfam12730"
/db_xref="CDD:205048"
gene complement(287219..288148)
/locus_tag="BAMEG_0338"
/db_xref="GeneID:7787322"
CDS complement(287219..288148)
/locus_tag="BAMEG_0338"
/note="identified by match to protein family HMM PF00005"
/codon_start=1
/transl_table=11
/product="putative bacitracin ABC transporter, ATP-binding
protein"
/protein_id="YP_002812959.1"
/db_xref="GI:227812950"
/db_xref="GeneID:7787322"
/translation="MSPINTIIKTTNLTKVYGKQKSVDNLNINVQQGEIYGFIGRNGA
GKTTTIRMLLGLIKPTSGTIEIFGEDLFQNQKDILSRIGSIVEVPGFYENLTAKENLL
INAKIIGVYKKNAIEDTLEIVGLQHETKKLVGKYSLGMKQRLGIARALLHYPELLILD
EPTNGLDPIGIKEMRKLIHSLAQERNITILISSHILAEVEQLVDRIGIIHEGRLLEEV
SLDKLRKANRKYIEFQVNNENKAAMLLENQFQIFDYEVHDEGNIRIYSHFGQQGYINR
TFVLNDIEVLKMMISEDRLEDYFTKLVGGGTIG"
misc_feature complement(287498..288100)
/locus_tag="BAMEG_0338"
/note="ATP-binding cassette domain of the
bacitracin-resistance transporter; Region:
ABC_BcrA_bacitracin_resist; cd03268"
/db_xref="CDD:213235"
misc_feature complement(287234..288097)
/locus_tag="BAMEG_0338"
/note="ABC-type multidrug transport system, ATPase
component [Defense mechanisms]; Region: CcmA; COG1131"
/db_xref="CDD:31326"
misc_feature complement(288008..288031)
/locus_tag="BAMEG_0338"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213235"
misc_feature complement(order(287567..287569,287666..287671,
287888..287890,288005..288013,288017..288022))
/locus_tag="BAMEG_0338"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213235"
misc_feature complement(287888..287899)
/locus_tag="BAMEG_0338"
/note="Q-loop/lid; other site"
/db_xref="CDD:213235"
misc_feature complement(287714..287743)
/locus_tag="BAMEG_0338"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213235"
misc_feature complement(287666..287683)
/locus_tag="BAMEG_0338"
/note="Walker B; other site"
/db_xref="CDD:213235"
misc_feature complement(287648..287659)
/locus_tag="BAMEG_0338"
/note="D-loop; other site"
/db_xref="CDD:213235"
misc_feature complement(287561..287581)
/locus_tag="BAMEG_0338"
/note="H-loop/switch region; other site"
/db_xref="CDD:213235"
gene complement(288217..289230)
/locus_tag="BAMEG_0339"
/db_xref="GeneID:7782020"
CDS complement(288217..289230)
/locus_tag="BAMEG_0339"
/note="identified by match to protein family HMM PF00512;
match to protein family HMM PF02518"
/codon_start=1
/transl_table=11
/product="putative sensor histidine kinase"
/protein_id="YP_002812960.1"
/db_xref="GI:227812951"
/db_xref="GeneID:7782020"
/translation="MKIDKILFLISLQLIIYGLLHIQMDPKVKISLFITLILITMYLF
FSRIQFIQNHKSIDTKLSRALKGNLQTRLFTSNDQSLHNIVFSINELITELEKVRIKA
NRSEESRKQLLSSISHDIRTPLTSIIGYIDALKDGVAASEIEKQEYLKILYMKSNNLK
HLVDEIFNMAKLDANEFPLKEEKLDFSEVTREVLIDFLPEISKHNIKLQVLMPESTCP
IIADHLSLMRIIGNLMKNAIYYGKDGKTIGVELLETDAAYELLIWDKGPGIPKHDLQN
VFERMYRSEQSRNSSFGGSGLGLSISKALVEKNGGHIWVESIPWERTTFGFSIPKHNT
FKK"
misc_feature complement(288232..289197)
/locus_tag="BAMEG_0339"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature complement(288718..288915)
/locus_tag="BAMEG_0339"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(288733..288735,288745..288747,
288754..288756,288766..288768,288775..288777,
288787..288789,288841..288843,288850..288852,
288862..288864,288871..288873,288883..288885,
288895..288897))
/locus_tag="BAMEG_0339"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(288877..288879)
/locus_tag="BAMEG_0339"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(288244..288555)
/locus_tag="BAMEG_0339"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(288256..288258,288262..288267,
288280..288282,288286..288288,288334..288345,
288424..288429,288433..288435,288439..288441,
288445..288447,288514..288516,288523..288525,
288535..288537))
/locus_tag="BAMEG_0339"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(288523..288525)
/locus_tag="BAMEG_0339"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(288337..288339,288343..288345,
288427..288429,288433..288435))
/locus_tag="BAMEG_0339"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(289220..289933)
/locus_tag="BAMEG_0340"
/db_xref="GeneID:7785068"
CDS complement(289220..289933)
/locus_tag="BAMEG_0340"
/note="identified by match to protein family HMM PF00072;
match to protein family HMM PF00486"
/codon_start=1
/transl_table=11
/product="DNA-binding response regulator"
/protein_id="YP_002812961.1"
/db_xref="GI:227812952"
/db_xref="GeneID:7785068"
/translation="MKDIRILIADDDKEIRNLLKIYLERELYMVDTAIDGEVALQLFN
QNNYSIVILDLMMPKVDGIEVCRKLRDKTNVPILMLTAKDHEVDKILGLSIGADDYIT
KPFSIHEVVARVKALIRRFLVLGSNINVQEKTTLAFKGLTINLNTYTVHTNKEEISLT
GKELELLKFFTSNPGQVFTKTQLFRNVWDDNYIEDDNTVMVHIRKLRKKIEIDPSNPK
FIQTVWGIGYKFVGEKLED"
misc_feature complement(289232..289921)
/locus_tag="BAMEG_0340"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature complement(289580..289915)
/locus_tag="BAMEG_0340"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(289622..289627,289634..289636,
289691..289693,289748..289750,289772..289774,
289901..289906))
/locus_tag="BAMEG_0340"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(289772..289774)
/locus_tag="BAMEG_0340"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(289748..289756,289760..289765))
/locus_tag="BAMEG_0340"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(289619..289627)
/locus_tag="BAMEG_0340"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(289244..289528)
/locus_tag="BAMEG_0340"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature complement(order(289253..289255,289268..289270,
289304..289309,289331..289333,289340..289342,
289394..289399,289454..289456))
/locus_tag="BAMEG_0340"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 290436..291944
/gene="rrs_8"
/locus_tag="BAMEG_0341"
/db_xref="GeneID:7787564"
rRNA 290436..291944
/gene="rrs_8"
/locus_tag="BAMEG_0341"
/product="16S ribosomal RNA"
/db_xref="GeneID:7787564"
gene 292123..295030
/gene="rrl_8"
/locus_tag="BAMEG_0343"
/db_xref="GeneID:7785645"
rRNA 292123..295030
/gene="rrl_8"
/locus_tag="BAMEG_0343"
/product="23S ribosomal RNA"
/db_xref="GeneID:7785645"
gene 295081..295196
/gene="rrf_8"
/locus_tag="BAMEG_0344"
/db_xref="GeneID:7785644"
rRNA 295081..295196
/gene="rrf_8"
/locus_tag="BAMEG_0344"
/product="5S ribosomal RNA"
/db_xref="GeneID:7785644"
misc_binding 295684..295786
/note="Purine riboswitch"
/bound_moiety="guanine and/or adenine"
gene 295895..296380
/gene="purE"
/locus_tag="BAMEG_0346"
/db_xref="GeneID:7785655"
CDS 295895..296380
/gene="purE"
/locus_tag="BAMEG_0346"
/EC_number="4.1.1.21"
/note="identified by match to protein family HMM PF00731;
match to protein family HMM TIGR01162"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole carboxylase
catalytic subunit"
/protein_id="YP_002812962.1"
/db_xref="GI:227812953"
/db_xref="GeneID:7785655"
/translation="MKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPD
YMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSI
VQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREAIEKDVREGSEL
V"
misc_feature 295904..296356
/gene="purE"
/locus_tag="BAMEG_0346"
/note="AIR carboxylase; Region: AIRC; pfam00731"
/db_xref="CDD:144362"
gene 296377..297528
/gene="purK"
/locus_tag="BAMEG_0347"
/db_xref="GeneID:7785968"
CDS 296377..297528
/gene="purK"
/locus_tag="BAMEG_0347"
/EC_number="4.1.1.21"
/note="With PurE catalyzes the conversion of
aminoimidazole ribonucleotide to carboxyaminoimidazole
ribonucleotide in the de novo purine nucleotide
biosynthetic pathway"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole carboxylase ATPase
subunit"
/protein_id="YP_002812963.1"
/db_xref="GI:227812954"
/db_xref="GeneID:7785968"
/translation="MTRIILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSP
CAQVADIEIVASYDDLKAIQHLAEISDVVTYEFENIDYRCLQWLEKHAYLPQGSQLLS
KTQNRFTEKNAIEKAGLPVATYRLVQNQEQLTEAIAELSYPSVLKTTTGGYDGKGQVV
LRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAENIHVNNIL
HESIVPARITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINELAPRPHNS
GHYTQDACETSQFGQHIRAICNLPLGETNLLKPVVMVNILGEHIEGVLRQVNRLTGCY
LHLYGKEEAKAQRKMGHVNILNDNIEVALEKAKSLHIWDHQEQLLEGKR"
misc_feature 296392..>296598
/gene="purK"
/locus_tag="BAMEG_0347"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:214164"
misc_feature 296395..297483
/gene="purK"
/locus_tag="BAMEG_0347"
/note="phosphoribosylaminoimidazole carboxylase ATPase
subunit; Reviewed; Region: PRK06019"
/db_xref="CDD:180352"
misc_feature 296716..297228
/gene="purK"
/locus_tag="BAMEG_0347"
/note="ATP-grasp domain; Region: ATP-grasp; pfam02222"
/db_xref="CDD:202164"
gene 297525..298832
/gene="purB"
/locus_tag="BAMEG_0348"
/db_xref="GeneID:7783254"
CDS 297525..298832
/gene="purB"
/locus_tag="BAMEG_0348"
/EC_number="4.3.2.2"
/note="Catalyzes two discrete reactions in the de novo
synthesis of purines: the cleavage of adenylosuccinate and
succinylaminoimidazole carboxamide ribotide"
/codon_start=1
/transl_table=11
/product="adenylosuccinate lyase"
/protein_id="YP_002812964.1"
/db_xref="GI:227812955"
/db_xref="GeneID:7783254"
/translation="MISRYTRPEMGAIWTEENKFKAWLEVEILACEAWAELGDIPKED
VKKIREHASFDIDRIYEIEKETRHDVVAFTRAVSETPALGEERKWVHYGLTSTDVVDT
ALSYILKQANEIILKDLENFVSILANKAKEHKYTIMMGRTHGVHAEPTTFGLKLGLWY
EEMKRNVERFKQAANTVRVGKLSGAVGTYANIDPFVEKYVCENLGLEAAPISTQTLQR
DRHAHYMSTLALIATSIEKMAVEIRGLQKSETREVEEAFAKGQKGSSAMPHKRNPIGS
ENMTGLARVIRGYMMTAYENVPLWHERDISHSSAERVILPDATIALNYMLNRFGNIVK
NLTVYPENMKRNMTRTYGLIYSQRVMLTLIDKGMVREEAYDIVQPKAMEAWETQVQFK
ELVEADERITSKLTQEEINECFNYEHHMQHVDTIFERLGLNEA"
misc_feature 297525..298811
/gene="purB"
/locus_tag="BAMEG_0348"
/note="adenylosuccinate lyase; Provisional; Region:
PRK07492"
/db_xref="CDD:181000"
misc_feature 297534..298811
/gene="purB"
/locus_tag="BAMEG_0348"
/note="Adenylsuccinate lyase (ASL)_subgroup 1; Region:
Adenylsuccinate_lyase_1; cd01360"
/db_xref="CDD:176464"
misc_feature order(297567..297572,297729..297731,297756..297758,
297789..297794,297798..297803,297945..297962,
297966..297968,297984..297989,297996..297998,
298005..298010,298026..298031,298047..298049,
298077..298088,298095..298097,298101..298103,
298149..298151,298155..298160,298179..298181,
298191..298193,298212..298214,298233..298235,
298245..298247,298251..298256,298260..298265,
298335..298340,298353..298355,298365..298367,
298374..298379,298383..298388,298395..298400,
298407..298415,298419..298442,298449..298454,
298458..298463,298473..298475,298593..298595,
298605..298607,298614..298619,298632..298637,
298782..298784,298788..298790,298800..298802)
/gene="purB"
/locus_tag="BAMEG_0348"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176464"
misc_feature order(297726..297728,297795..297797,297951..297953,
298164..298166,298332..298334,298338..298340,
298353..298355)
/gene="purB"
/locus_tag="BAMEG_0348"
/note="active site"
/db_xref="CDD:176464"
gene 298921..299640
/gene="purC"
/locus_tag="BAMEG_0349"
/db_xref="GeneID:7784053"
CDS 298921..299640
/gene="purC"
/locus_tag="BAMEG_0349"
/EC_number="6.3.2.6"
/note="catalyzes the formation of
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-
carboxamido)succinate from
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and
L-aspartate in purine biosynthesis; SAICAR synthase"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazolesuccinocarboxamide
synthase"
/protein_id="YP_002812965.1"
/db_xref="GI:227812956"
/db_xref="GeneID:7784053"
/translation="MQKLELLYEGKAKRIYRTESADMVWVEYKDSATAFNGEKKETIT
GKGRLNNEITTLLFRKLQEVGIKTHFVEKLSETEQLVKKVSIIPLEVVTRNVIAGSLS
KRLGMEEGTVLAEPIVEFYFKDDDLGDPLVTEDHIRVLNVASPEQVSVLRDMALQINQ
VLIDHFASCRVRLVDFKLEFGVTDEGAIILADEISPDTCRLWDETSNEKFDKDVFRRD
LGNLTDAYEEILKRLGGISHV"
misc_feature 298921..299628
/gene="purC"
/locus_tag="BAMEG_0349"
/note="phosphoribosylaminoimidazole-succinocarboxamide
synthase; Reviewed; Region: PRK09362"
/db_xref="CDD:181800"
misc_feature 298936..299625
/gene="purC"
/locus_tag="BAMEG_0349"
/note="bacterial and archaeal
5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide
(SAICAR) synthase; Region: SAICAR_synt_PurC; cd01415"
/db_xref="CDD:133470"
misc_feature order(298939..298944,298948..298953,298957..298959,
298963..298968,298990..298992,298996..298998,
299125..299127,299164..299166,299170..299172,
299176..299178,299287..299289,299455..299457,
299491..299496)
/gene="purC"
/locus_tag="BAMEG_0349"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:133470"
misc_feature order(298942..298944,298948..298959,298963..298965,
298990..298992,299026..299028,299128..299130,
299161..299172,299176..299178,299188..299190,
299194..299196,299200..299202,299212..299220,
299281..299283,299287..299289,299305..299307,
299443..299451,299455..299457,299494..299496,
299509..299520)
/gene="purC"
/locus_tag="BAMEG_0349"
/note="active site"
/db_xref="CDD:133470"
misc_feature order(299026..299028,299188..299190,299194..299196,
299200..299202,299212..299220,299281..299283,
299305..299307,299443..299451,299509..299520)
/gene="purC"
/locus_tag="BAMEG_0349"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133470"
gene 299633..299887
/gene="purS"
/locus_tag="BAMEG_0350"
/db_xref="GeneID:7786345"
CDS 299633..299887
/gene="purS"
/locus_tag="BAMEG_0350"
/note="With PurL and PurQ catalyzes the conversion of
formylglycinamide ribonucleotide, ATP, and glutamine to
formylglycinamidine ribonucleotide, ADP, and glutamate in
the fourth step of the purine biosynthetic pathway"
/codon_start=1
/transl_table=11
/product="phosphoribosylformylglycinamidine synthase
subunit PurS"
/protein_id="YP_002812966.1"
/db_xref="GI:227812957"
/db_xref="GeneID:7786345"
/translation="MYKVKVYVTLRESVLDPQGTAVKGALHSLSFTEVQDVRIGKYME
LTIDKSVSDLDAKVKEMCEKLLANVVMEDFRYEVEEVVAQ"
misc_feature 299636..299872
/gene="purS"
/locus_tag="BAMEG_0350"
/note="phosphoribosylformylglycinamidine synthase subunit
PurS; Reviewed; Region: PRK05974"
/db_xref="CDD:180332"
gene 299884..300567
/gene="purQ"
/locus_tag="BAMEG_0351"
/db_xref="GeneID:7787163"
CDS 299884..300567
/gene="purQ"
/locus_tag="BAMEG_0351"
/EC_number="6.3.5.3"
/note="catalyzes the formation of
2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from
N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and
L-glutamine in purine biosynthesis"
/codon_start=1
/transl_table=11
/product="phosphoribosylformylglycinamidine synthase I"
/protein_id="YP_002812967.1"
/db_xref="GI:227812958"
/db_xref="GeneID:7787163"
/translation="MKFAVIVFPGSNCDVDMFHAIKDELGEEVDYVWHDTENLDEYDA
ILLPGGFSYGDYLRCGAISRFANAMKAVQKAAEQGKPILGVCNGFQILVESGLLPGAL
MRNENLKFMCRTVQLRVENNETMFTSQYEKDEVINIPIAHGEGNYYCDEETLKQLEEN
NQIAFRYVENPNGSVSDIAGIVNEKGNVLGMMPHPERAVDELLGGAEGLKVFQSILKQ
WRETYVVNA"
misc_feature 299884..300534
/gene="purQ"
/locus_tag="BAMEG_0351"
/note="phosphoribosylformylglycinamidine synthase I;
Provisional; Region: PRK03619"
/db_xref="CDD:179609"
misc_feature 299890..300531
/gene="purQ"
/locus_tag="BAMEG_0351"
/note="Type 1 glutamine amidotransferase (GATase1)-like
domain found in Formylglycinamide ribonucleotide
amidotransferase; Region: GATase1_FGAR_AT; cd01740"
/db_xref="CDD:153211"
misc_feature order(300031..300036,300046..300048,300139..300141,
300151..300153,300304..300309,300457..300459,
300463..300474)
/gene="purQ"
/locus_tag="BAMEG_0351"
/note="putative active site [active]"
/db_xref="CDD:153211"
misc_feature order(300139..300141,300463..300465,300469..300471)
/gene="purQ"
/locus_tag="BAMEG_0351"
/note="catalytic triad [active]"
/db_xref="CDD:153211"
gene 300551..302770
/gene="purL"
/locus_tag="BAMEG_0352"
/db_xref="GeneID:7782775"
CDS 300551..302770
/gene="purL"
/locus_tag="BAMEG_0352"
/EC_number="6.3.5.3"
/note="catalyzes the formation of
2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from
N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and
L-glutamine in purine biosynthesis"
/codon_start=1
/transl_table=11
/product="phosphoribosylformylglycinamidine synthase II"
/protein_id="YP_002812968.1"
/db_xref="GI:227812959"
/db_xref="GeneID:7782775"
/translation="MSLMLEPNPTQIKEERIYAEMGLTDEEFAMVEKILGRLPNYTET
GLFSVMWSEHCSYKNSKPVLRKFPTTGERVLQGPGEGAGIVDIGDNQAVVFKMESHNH
PSAIEPYQGAATGVGGIIRDVFSMGARPVALLNSLRFGELQSPRVKYLFEEVVAGIAG
YGNCIGIPTVGGEVQFDPCYEGNPLVNAMCVGLINHEDIKKGQAHGAGNTVMYVGAST
GRDGIHGATFASEELSESSEAKRPAVQVGDPFMEKLLIEACLELIQSDALVGIQDMGA
AGLTSSSAEMASKAGMGIEMYLDDVPQRETGMTPYEMMLSESQERMLIVVKKGREQEI
VDLFEKYGLAAVTMGKVTEDKMLRLFHKGEMVAEVPADALAEEAPIYHKPSKEAAYFA
EFQQMKMETPKVENYKETLFALLQQPTIASKEWVYDQYDYQVRTSTVVTPGSDAAVVR
VRGTEKGLAMTTDCNSRYIYLDPEVGGKIAVAEAARNIVCSGGEPLAITDCLNFGNPE
KPEIFWQIEKSVDGMSEACRTLQTPVIGGNVSMYNERSGEAVYPTPTVGMVGLVHDLK
HVTTQEFKQAGDLVYVIGETKAEFGGSELQKMLHGKIFGQSPSIDLDVELKRQKQVLA
AIQAGLVQSAHDVAEGGLAVAISESAIGANGLGATVKLDGEATAALFAESQSRFVITV
KRENKEAFEKAVEAIQVGEVTNTNEVTIHNEENEVLLTANVDEMRKAWKGAIPCLLK"
misc_feature 300581..302767
/gene="purL"
/locus_tag="BAMEG_0352"
/note="phosphoribosylformylglycinamidine synthase II;
Provisional; Region: PRK01213"
/db_xref="CDD:179249"
misc_feature 300677..301657
/gene="purL"
/locus_tag="BAMEG_0352"
/note="PurL subunit of the formylglycinamide
ribonucleotide amidotransferase (FGAR-AT), first repeat.
FGAR-AT catalyzes the ATP-dependent conversion of
formylglycinamide ribonucleotide (FGAR) and glutamine to
formylglycinamidine ribonucleotide (FGAM), ADP; Region:
PurL_repeat1; cd02203"
/db_xref="CDD:100034"
misc_feature order(300824..300835,300839..300841,300914..300916,
300944..300946,300953..300955,300962..300964,
301067..301069,301100..301105,301115..301117)
/gene="purL"
/locus_tag="BAMEG_0352"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100034"
misc_feature order(300902..300904,300914..300916,301061..301069)
/gene="purL"
/locus_tag="BAMEG_0352"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100034"
misc_feature 301883..302656
/gene="purL"
/locus_tag="BAMEG_0352"
/note="PurL subunit of the formylglycinamide
ribonucleotide amidotransferase (FGAR-AT), second repeat.
FGAR-AT catalyzes the ATP-dependent conversion of
formylglycinamide ribonucleotide (FGAR) and glutamine to
formylglycinamidine ribonucleotide (FGAM), ADP; Region:
PurL_repeat2; cd02204"
/db_xref="CDD:100035"
misc_feature order(301919..301930,301934..301936,302009..302011,
302045..302047,302054..302056,302063..302065,
302162..302164,302204..302209,302219..302221)
/gene="purL"
/locus_tag="BAMEG_0352"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100035"
misc_feature order(301997..301999,302009..302011,302156..302164)
/gene="purL"
/locus_tag="BAMEG_0352"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100035"
gene 302755..304170
/gene="purF"
/locus_tag="BAMEG_0353"
/db_xref="GeneID:7784940"
CDS 302755..304170
/gene="purF"
/locus_tag="BAMEG_0353"
/EC_number="2.4.2.14"
/note="Catalyzes first step of the de novo purine
nucleotide biosynthetic pathway"
/codon_start=1
/transl_table=11
/product="amidophosphoribosyltransferase"
/protein_id="YP_002812969.1"
/db_xref="GI:227812960"
/db_xref="GeneID:7784940"
/translation="MLAEIKGLNEECGVFGIWGHENAAQVSYYGLHSLQHRGQEGAGI
VVNNGEKIVGHKGLGLISEVFSRGELEGLNGKSAIGHVRYATAGGSEVANVQPLLFRF
SDHSMALAHNGNLINAKMLRRELEAEGSIFQTSSDTEVLLHLIKRSTKDSLIESVKEA
LNKVKGAFAYLLLTGNEMIVALDPNGFRPLSIGKMGDAYVVASETCAFDVVGATYIRD
VEPGELLIINDEGIHVDRFTNEVDHAICSMEYIYFARPDSNIAGINVHAARKNMGKRL
AAEAPIEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQELREQG
VKMKLSAVRGVVEGKRVVMIDDSIVRGTTSKRIVRMLREAGATEVHVRIASPPLKYPC
FYGIDIQTRKELIAANHTVEEIREMIGADSLTFLSEDGLVDAIGRPYEGKYGGLCMAY
FNGDYPTALYDYEQELLESMK"
misc_feature 302755..304167
/gene="purF"
/locus_tag="BAMEG_0353"
/note="amidophosphoribosyltransferase; Provisional;
Region: PRK06781"
/db_xref="CDD:136048"
misc_feature 302788..303534
/gene="purF"
/locus_tag="BAMEG_0353"
/note="Glutamine amidotransferases class-II (GN-AT)_GPAT-
type. This domain is found at the N-terminus of glutamine
phosphoribosylpyrophosphate (Prpp) amidotransferase
(GPATase) . The glutaminase domain catalyzes amide
nitrogen transfer from glutamine to the...; Region:
GPATase_N; cd00715"
/db_xref="CDD:48479"
misc_feature order(302788..302790,302863..302868,303001..303003,
303088..303093,303163..303165)
/gene="purF"
/locus_tag="BAMEG_0353"
/note="active site"
/db_xref="CDD:48479"
misc_feature order(302836..302841,302848..302850,302869..302871,
303052..303054,303169..303171,303178..303183,
303190..303195)
/gene="purF"
/locus_tag="BAMEG_0353"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:48479"
misc_feature 303568..303906
/gene="purF"
/locus_tag="BAMEG_0353"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(303625..303627,303631..303633,303817..303825,
303829..303843)
/gene="purF"
/locus_tag="BAMEG_0353"
/note="active site"
/db_xref="CDD:206754"
gene 304277..305317
/gene="purM"
/locus_tag="BAMEG_0354"
/db_xref="GeneID:7785242"
CDS 304277..305317
/gene="purM"
/locus_tag="BAMEG_0354"
/EC_number="6.3.3.1"
/note="catalyzes the formation of
1-(5-phosphoribosyl)-5-aminoimidazole from
2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in
purine biosynthesis"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole synthetase"
/protein_id="YP_002812970.1"
/db_xref="GI:227812961"
/db_xref="GeneID:7785242"
/translation="MANAYKQAGVDIEAGYEAVSRMKKHVQTTMRKEVLGGLGGFGGM
FDLSKFALEEPVLVSGTDGVGTKLMLAFMADKHDTIGIDAVAMCVNDIVVQGAEPLFF
LDYIACGKAEPSKIENIVKGISEGCRQAGCALIGGETAEMPGMYSTEEYDLAGFTVGI
VDKKKIVTGEKIEAGHVLIGLASSGIHSNGYSLVRKVLLEDGELSLDRIYGRLELPLG
EELLKPTKIYVKPILELLKNHEVYGMAHITGGGFIENIPRMLPEGIGAEIELGSWKIQ
PIFSLLQEVGKLEEKEMFNIFNMGIGMVVAVKEEDAKDIVRLLEEQGETARIIGRTVQ
GAGVTFNGGKAL"
misc_feature 304283..305269
/gene="purM"
/locus_tag="BAMEG_0354"
/note="phosphoribosylaminoimidazole synthetase;
Provisional; Region: PRK05385"
/db_xref="CDD:180049"
misc_feature 304406..305275
/gene="purM"
/locus_tag="BAMEG_0354"
/note="PurM (Aminoimidazole Ribonucleotide [AIR]
synthetase), one of eleven enzymes required for purine
biosynthesis, catalyzes the conversion of
formylglycinamide ribonucleotide (FGAM) and ATP to AIR,
ADP, and Pi, the fifth step in de novo purine
biosynthesis; Region: PurM; cd02196"
/db_xref="CDD:100032"
misc_feature order(304406..304411,304442..304453,304457..304459,
304463..304465,304481..304483,304547..304549,
304559..304561,304577..304579,304586..304588,
304595..304597,304688..304690,304700..304702,
304706..304708,304727..304732,304742..304744,
305048..305050)
/gene="purM"
/locus_tag="BAMEG_0354"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100032"
misc_feature order(304547..304549,304682..304690)
/gene="purM"
/locus_tag="BAMEG_0354"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:100032"
gene 305314..305901
/gene="purN"
/locus_tag="BAMEG_0355"
/db_xref="GeneID:7783157"
CDS 305314..305901
/gene="purN"
/locus_tag="BAMEG_0355"
/EC_number="2.1.2.2"
/note="glycinamide ribonucleotide transformylase; GAR
Tfase; catalyzes the synthesis of
5'-phosphoribosylformylglycinamide from
5'-phosphoribosylglycinamide and
10-formyltetrahydrofolate; PurN requires formyl folate for
the reaction unlike PurT which uses formate"
/codon_start=1
/transl_table=11
/product="phosphoribosylglycinamide formyltransferase"
/protein_id="YP_002812971.1"
/db_xref="GI:227812962"
/db_xref="GeneID:7783157"
/translation="MSRLAVFASGSGSNFQSLVNAVEEKRLDAEISLLVCDKPEARAV
GRANYHHIPCFAFSAKAYESKEAFEKEILNKLEEYEIDYVILAGYMRLIGPTLLEAYG
GRIINIHPSLLPSFPGKDAVGQALEAGVKVTGVTIHYVDAGMDTGPIIAQEAVVVSEG
DTRESLQKKIQQVEHKLYVNTVNQIVQSTKEPTVN"
misc_feature 305314..305874
/gene="purN"
/locus_tag="BAMEG_0355"
/note="phosphoribosylglycinamide formyltransferase;
Reviewed; Region: purN; PRK05647"
/db_xref="CDD:180182"
misc_feature 305320..305868
/gene="purN"
/locus_tag="BAMEG_0355"
/note="Phosphoribosylglycinamide formyltransferase (GAR
transformylase, GART); Region: FMT_core_GART; cd08645"
/db_xref="CDD:187714"
misc_feature order(305335..305337,305350..305358,305569..305592,
305605..305607,305632..305643,305665..305667,
305725..305727,305731..305736,305743..305748,
305833..305835)
/gene="purN"
/locus_tag="BAMEG_0355"
/note="active site"
/db_xref="CDD:187714"
misc_feature order(305350..305355,305572..305577,305635..305637,
305641..305643,305833..305835)
/gene="purN"
/locus_tag="BAMEG_0355"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187714"
misc_feature order(305569..305571,305578..305580,305584..305592,
305605..305607,305632..305634,305731..305736,
305743..305748)
/gene="purN"
/locus_tag="BAMEG_0355"
/note="cosubstrate binding site; other site"
/db_xref="CDD:187714"
misc_feature order(305632..305634,305638..305640,305746..305748)
/gene="purN"
/locus_tag="BAMEG_0355"
/note="catalytic site [active]"
/db_xref="CDD:187714"
gene 305926..307461
/gene="purH"
/locus_tag="BAMEG_0356"
/db_xref="GeneID:7783656"
CDS 305926..307461
/gene="purH"
/locus_tag="BAMEG_0356"
/EC_number="2.1.2.3"
/EC_number="3.5.4.10"
/note="involved in de novo purine biosynthesis"
/codon_start=1
/transl_table=11
/product="bifunctional
phosphoribosylaminoimidazolecarboxamide
formyltransferase/IMP cyclohydrolase"
/protein_id="YP_002812972.1"
/db_xref="GI:227812963"
/db_xref="GeneID:7783656"
/translation="MKKRALVSVSDKTGVVEFVKGLLEQGIEVISTGGTKKLLEENGL
QVIGISEVTGFPEIMDGRVKTLHPNIHGGLLAVRDNETHVAQMNELGMEPIDFVVVNL
YPFKETIAKPDVTFADAIENIDIGGPTMIRSAAKNHKFVSVIVDPVDYDVVLAELKEN
GEVAEETKRKLAAKVFRHTAAYDALISNYLTEQMGEESPETLTVTFEKKQDLRYGENP
HQKATFYKAPFAATSSVAYAEQLHGKELSYNNINDADAALSIVKEFTEPAVVAVKHMN
PCGVGVGTDIHEAYTRAYEADPVSIFGGIIAANREIDKATAEKLHEIFLEIIIAPSFS
KEALEVLQSKKNLRLLTVNIEKATSASKKLTSVQGGLLVQEEDTLSLDESTISIPTKR
EPSEQEWKDLKLAWKVVKHVKSNAIVLAKDDMTIGVGAGQMNRVGSAKIAITQAGEKA
QGSALASDAFFPMPDTVEEAAKAGITAIIQPGGSIRDEDSIKVADTYGIAMVFTGVRH
FKH"
misc_feature 305926..307458
/gene="purH"
/locus_tag="BAMEG_0356"
/note="bifunctional
phosphoribosylaminoimidazolecarboxamide
formyltransferase/IMP cyclohydrolase; Provisional; Region:
purH; PRK00881"
/db_xref="CDD:179152"
misc_feature 305932..306495
/gene="purH"
/locus_tag="BAMEG_0356"
/note="Inosine monophosphate cyclohydrolase domain. This
is the N-terminal domain in the purine biosynthesis
pathway protein ATIC (purH). The bifunctional ATIC protein
contains a C-terminal ATIC formylase domain that
formylates...; Region: IMPCH; cd01421"
/db_xref="CDD:29633"
misc_feature order(305953..305955,305959..305961,306019..306021,
306028..306030,306115..306120,306226..306228,
306295..306297)
/gene="purH"
/locus_tag="BAMEG_0356"
/note="purine monophosphate binding site [chemical
binding]; other site"
/db_xref="CDD:29633"
misc_feature order(306088..306090,306097..306102,306109..306114,
306121..306129,306136..306141,306148..306150,
306292..306300,306307..306309,306319..306324,
306331..306333,306430..306432,306439..306447,
306469..306477,306481..306486,306493..306495)
/gene="purH"
/locus_tag="BAMEG_0356"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29633"
misc_feature order(306115..306117,306295..306297)
/gene="purH"
/locus_tag="BAMEG_0356"
/note="putative catalytic residues [active]"
/db_xref="CDD:29633"
misc_feature 306325..307263
/gene="purH"
/locus_tag="BAMEG_0356"
/note="AICARFT/IMPCHase bienzyme; Region: AICARFT_IMPCHas;
smart00798"
/db_xref="CDD:197879"
misc_feature <307114..307458
/gene="purH"
/locus_tag="BAMEG_0356"
/note="AICARFT/IMPCHase bienzyme; Region: AICARFT_IMPCHas;
cl03362"
/db_xref="CDD:198815"
gene 307583..308854
/gene="purD"
/locus_tag="BAMEG_0357"
/db_xref="GeneID:7782718"
CDS 307583..308854
/gene="purD"
/locus_tag="BAMEG_0357"
/EC_number="6.3.4.13"
/note="catalyzes the formation of
N(1)-(5-phospho-D-ribosyl)glycinamide from
5-phospho-D-ribosylamine and glycine in purine
biosynthesis"
/codon_start=1
/transl_table=11
/product="phosphoribosylamine--glycine ligase"
/protein_id="YP_002812973.1"
/db_xref="GI:227812964"
/db_xref="GeneID:7782718"
/translation="MNVLVIGRGGREHALAWKFAQSEKVEKVYVAPGNEGMRDVATPI
DIDENDFDALVLFAKENHVELTFVGPEIPLMNGIVDRFKEEGLRVFGPNKAAAVIEGS
KAFTKELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPIVIKADGLAAGKGVTVAMTLE
EALQAAKEMLQDVKFGEASKKVVIEEFLDGQEFSLMAFVNGTTVHPMVIAQDHKRAFD
GDKGPNTGGMGAYSPVPQISESAVQEAIETVLYPTAKAMIQENRSFTGILYAGLILTN
DGPKVIEFNARFGDPETEVVLPRLENDLVDVCNAVLDESELTLQWSDEAVIGVVLAAK
GYPEAYKKGDIIKGLDALQDVIVFHAGTAMKRGDFVTNGGRVLFVACKANSLQEAKDK
VYKEIGKIESDVLFYRSDIGYRAIGHEMTRS"
misc_feature 307583..308830
/gene="purD"
/locus_tag="BAMEG_0357"
/note="phosphoribosylamine--glycine ligase; Provisional;
Region: PRK00885"
/db_xref="CDD:179154"
misc_feature 307583..307882
/gene="purD"
/locus_tag="BAMEG_0357"
/note="Phosphoribosylglycinamide synthetase, N domain;
Region: GARS_N; pfam02844"
/db_xref="CDD:202429"
misc_feature 307883..308461
/gene="purD"
/locus_tag="BAMEG_0357"
/note="Phosphoribosylglycinamide synthetase, ATP-grasp (A)
domain; Region: GARS_A; pfam01071"
/db_xref="CDD:201585"
misc_feature 308555..308830
/gene="purD"
/locus_tag="BAMEG_0357"
/note="Phosphoribosylglycinamide synthetase, C domain;
Region: GARS_C; pfam02843"
/db_xref="CDD:202428"
gene complement(308890..309054)
/locus_tag="BAMEG_0358"
/db_xref="GeneID:7785461"
CDS complement(308890..309054)
/locus_tag="BAMEG_0358"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812974.1"
/db_xref="GI:227812965"
/db_xref="GeneID:7785461"
/translation="MAKKKSFPLRIDPELHAVIEKWANDEFRSVNAHIEYLLREMAKQ
KGKLKKDKDA"
misc_feature complement(<308935..309051)
/locus_tag="BAMEG_0358"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4877"
/db_xref="CDD:34486"
gene complement(309071..309916)
/locus_tag="BAMEG_0359"
/db_xref="GeneID:7782362"
CDS complement(309071..309916)
/locus_tag="BAMEG_0359"
/note="identified by match to protein family HMM PF01145"
/codon_start=1
/transl_table=11
/product="SPFH domain/band 7 family protein"
/protein_id="YP_002812975.1"
/db_xref="GI:227812966"
/db_xref="GeneID:7782362"
/translation="MKEKQVFYVNGFLGIIGILILAAIGVFFLIQEIFIGAALTIILA
AVLATGIGIVQPNQAKVITFFGNYLGTIRQNGLFLTIPFAFRQTVSLRVENFNSKKLK
VNDVDGNPIEIAAVIVYKVVDSAKAMFGVEHYDRFVEIQSETAIRHVATKYPYDNFQD
ETCITLRGNTEEISEELKRELEARLEIAGVEVLETRLTHLAYATEIAHAMLQRQQAKA
VLAARKEIVEGAVKMAKDSIHMLDEEGVLELDDERKANMVNNLLVAIVSDKGAQPVIN
TGSLY"
misc_feature complement(309110..309757)
/locus_tag="BAMEG_0359"
/note="A subgroup of the band 7 domain of flotillin
(reggie) like proteins. This subgroup contains proteins
similar to stomatin, prohibitin, flotillin, HlfK/C and
podicin. Many of these band 7 domain-containing proteins
are lipid raft-associated. Individual...; Region:
Band_7_2; cd03402"
/db_xref="CDD:48214"
misc_feature complement(<309230..309757)
/locus_tag="BAMEG_0359"
/note="Membrane protease subunits, stomatin/prohibitin
homologs [Posttranslational modification, protein
turnover, chaperones]; Region: HflC; COG0330"
/db_xref="CDD:30678"
gene complement(310126..310503)
/locus_tag="BAMEG_0360"
/db_xref="GeneID:7781930"
CDS complement(310126..310503)
/locus_tag="BAMEG_0360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812976.1"
/db_xref="GI:227812967"
/db_xref="GeneID:7781930"
/translation="MKQNIGTINALIRITLGLVLFGCSATKLVRKPWCTWSNILLWIG
AMKVAEGIVRFCPVVEMWKFGKYMNMGAFKMPSMNFAEKGHTKEEVNQTSNHDKPQSN
GSYDASDKEIESAIEDIILAKPL"
misc_feature complement(310321..310503)
/locus_tag="BAMEG_0360"
/note="Protein of unknown function (DUF2892); Region:
DUF2892; pfam11127"
/db_xref="CDD:204593"
gene 310838..311527
/locus_tag="BAMEG_0361"
/db_xref="GeneID:7782593"
CDS 310838..311527
/locus_tag="BAMEG_0361"
/note="PcrB-like protein; GGGP synthase; member of
prenyltransferases that transfer isoprenoid groups to
nonisoprenoid acceptors; functions in form GGGP from
glycerol-1-phosphate (G-1-P) and geranylgeranyl
pyrophosphate (GGPP); important in lipid metabolism and
especially important as the ether linkages in archaea are
different than those in bacteria; GGGP synthase lies at
the branch point for membrane lipid biosynthesis;
cytosolic; T acidophilum protein acts as a homodimer while
M thermoautotrophicum protein has been reported to
function as a pentamer"
/codon_start=1
/transl_table=11
/product="geranylgeranylglyceryl phosphate synthase"
/protein_id="YP_002812977.1"
/db_xref="GI:227812968"
/db_xref="GeneID:7782593"
/translation="MYDISGWKHVFKLDPNKELSDEHLEMICESGTDAVIVGGSDGVT
IDNVLHMLVSIRRYAVPCVLEVSDVEAITPGFDFYYIPSVLNSRKVEWVTGVHHEALK
EFGDIMDWDEIFMEGYCVLNPEAKVAQLTDAKCDVTEDDVIAYARLADKLLRLPIFYL
EYSGTYGDVELVKNVKAELKQAKLYYGGGISNAEQAKEMAQHADTVVVGNIIYDDIKA
ALKTVKAVKGE"
misc_feature 310841..311518
/locus_tag="BAMEG_0361"
/note="PcrB family; Region: PcrB; pfam01884"
/db_xref="CDD:202027"
misc_feature 310859..311506
/locus_tag="BAMEG_0361"
/note="PcrB_like proteins. One member of this family, a
protein from Archaeoglobus fulgidus, has been
characterized as a (S)-3-O-geranylgeranylglyceryl
phosphate synthase (AfGGGPS). AfGGGPS catalyzes the
formation of an ether linkage between...; Region:
PcrB_like; cd02812"
/db_xref="CDD:73374"
misc_feature order(310871..310873,311312..311314,311318..311320,
311327..311329,311396..311404,311465..311467)
/locus_tag="BAMEG_0361"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73374"
misc_feature order(310877..310879,310955..310957,311312..311314,
311318..311320,311324..311326)
/locus_tag="BAMEG_0361"
/note="putative active site [active]"
/db_xref="CDD:73374"
misc_feature order(311090..311092,311105..311107,311117..311119,
311129..311131,311141..311143,311255..311257,
311264..311269,311279..311281,311288..311290,
311357..311359)
/locus_tag="BAMEG_0361"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:73374"
gene 311528..313783
/gene="pcrA"
/locus_tag="BAMEG_0362"
/db_xref="GeneID:7781977"
CDS 311528..313783
/gene="pcrA"
/locus_tag="BAMEG_0362"
/EC_number="3.6.1.-"
/note="identified by match to protein family HMM PF00580;
match to protein family HMM TIGR01073"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase PcrA"
/protein_id="YP_002812978.1"
/db_xref="GI:227812969"
/db_xref="GeneID:7781977"
/translation="MQAYMSMTDRLLNGLNPQQQKAVQTTNGPLLLMAGAGSGKTRVL
THRIAYLLGEKGVAPWNVLAITFTNKAAREMRERIDTLVGPEAEDIWISTFHSMCVRI
LRRDIDHIGINRNFTILDSGDQLTVVKKIMKERNIDPKKFEPRSILAGISNAKNELLS
ADKYAKKITIADPYEKLTSDVYTEYQKRLLKNNSLDFDDLIMTTIQLFERVPEVLEFY
QRKFQYIHVDEYQDTNKAQYLLVKHLAARFKNLCVVGDSDQSIYRWRGADISNILSFE
KDYENAQVILLEQNYRSSQNILNAANAVIERNTNRKPKKLWTDNEVGSKISYYRAATE
KDEAYFVAKKIRDDIQMGKRKYTDFAVLYRTNAQSRMVEEIFLKSNIPYKIVGGTKFY
DRKEIKDILAYLRLIGNPDDEISFARIINVPKRGIGATSIDKIINYGVQNGISLTAVF
DEIEHVGVSAKVTKAVKEFAGLLHNWVNMQEYLSVTELVEEVIEKTGYRDMLKNERTL
EAEGRLENLDEFLSVTQTFESQSEDKSLVAFLTDLALVADIDRVDEDPTAGEEVILMT
MHSAKGLEFPVVFIVGLEEGIFPHTRSLMEEDEMQEERRLAYVGITRAEEELYLSNAQ
MRTLFGRTSMNAASRFITEIPTELVESLNETAPKRETSFGAKGRVASSSKTTTTTRSR
SAFARPAAKTTGGEQIGWAVGDKASHQKWGVGTVISVKGEGDAKELDIAFPSPIGVKR
LLAKFAPVTKQ"
misc_feature 311558..313771
/gene="pcrA"
/locus_tag="BAMEG_0362"
/note="ATP-dependent DNA helicase PcrA; Region: pcrA;
TIGR01073"
/db_xref="CDD:162191"
misc_feature 311591..311824
/gene="pcrA"
/locus_tag="BAMEG_0362"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:205425"
misc_feature 313094..313387
/gene="pcrA"
/locus_tag="BAMEG_0362"
/note="Family description; Region: UvrD_C_2; pfam13538"
/db_xref="CDD:205716"
gene 313799..315808
/gene="ligA"
/locus_tag="BAMEG_0363"
/db_xref="GeneID:7782635"
CDS 313799..315808
/gene="ligA"
/locus_tag="BAMEG_0363"
/EC_number="6.5.1.2"
/note="this protein catalyzes the formation of
phosphodiester linkages between 5'-phosphoryl and
3'-hydroxyl groups in double-stranded DNA using NAD as a
coenzyme and as the energy source for the reaction;
essential for DNA replication and repair of damaged DNA;
similar to ligase LigB"
/codon_start=1
/transl_table=11
/product="NAD-dependent DNA ligase LigA"
/protein_id="YP_002812979.1"
/db_xref="GI:227812970"
/db_xref="GeneID:7782635"
/translation="MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQEL
IKLEAENPEFMSEDSPSIRVGGTVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQ
GIDDANVRYICELKIDGLAVSLHYEKGRFIQGATRGDGVTGEDITQNLKTIKAIPLRL
NEEVTLEARGEAYMPKRSFVKLNEEKEQNGEDVFANPRNAAAGSIRQLDPKIAAKRNL
SMFVYGLANVEEKTIPSHSESLDYLGELGFKTNPNRRTCETIEEVIAYVEEWQEKRPH
LDYEIDGIVIKVDDVALQESLGTTAKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVV
TPTAELEPVRVAGTIVRRASLHNEDLIREKDIRIGDYVVVKKAGDIIPEVVNVIFDKR
TGGEEEYHMPTHCPACESELVRLEEEVALRCINPTCPAQIREGLIHFVSRNAMNIDGL
GERVITQLFDADYIRTFADLYSLTKEQLLQLERFGEKSATNLVQAIENSKENSLERLL
FGLGIRHVGAKAARTFAEHFETMDALVKATEEELKAINEIGEKMAQSVVAYFDNEDVL
ELLQQFKEYGVNMTYKGIKIADLQNVESYFAGKTVVLTGKLEVMGRSEAKKKIEALGG
KVTGSVSKSTDLVVAGEAAGSKLAQAEKHNVEVWNEERFLQELNK"
misc_feature 313802..315805
/gene="ligA"
/locus_tag="BAMEG_0363"
/note="NAD-dependent DNA ligase LigA; Validated; Region:
ligA; PRK07956"
/db_xref="CDD:181181"
misc_feature 313820..314740
/gene="ligA"
/locus_tag="BAMEG_0363"
/note="NAD+ dependent DNA ligase adenylation domain. DNA
ligases catalyze the crucial step of joining the breaks in
duplex DNA during DNA replication, repair and
recombination, utilizing either ATP or NAD(+) as a
cofactor, but using the same basic reaction...; Region:
LIGANc; cd00114"
/db_xref="CDD:29013"
misc_feature order(314048..314050,314138..314140,314144..314146,
314207..314209,314309..314311,314465..314467,
314651..314653,314657..314659)
/gene="ligA"
/locus_tag="BAMEG_0363"
/note="nucleotide binding pocket [chemical binding]; other
site"
/db_xref="CDD:29013"
misc_feature order(314144..314146,314150..314155)
/gene="ligA"
/locus_tag="BAMEG_0363"
/note="K-X-D-G motif; other site"
/db_xref="CDD:29013"
misc_feature 314144..314146
/gene="ligA"
/locus_tag="BAMEG_0363"
/note="catalytic site [active]"
/db_xref="CDD:29013"
misc_feature 314747..314992
/gene="ligA"
/locus_tag="BAMEG_0363"
/note="NAD-dependent DNA ligase OB-fold domain; Region:
DNA_ligase_OB; pfam03120"
/db_xref="CDD:145978"
misc_feature 315386..315475
/gene="ligA"
/locus_tag="BAMEG_0363"
/note="endonuclease III; includes endonuclease III
(DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA
glycosidases (Alka-family) and other DNA glycosidases;
Region: ENDO3c; cl14786"
/db_xref="CDD:209897"
misc_feature 315590..315781
/gene="ligA"
/locus_tag="BAMEG_0363"
/note="Breast Cancer Suppressor Protein (BRCA1),
carboxy-terminal domain. The BRCT domain is found within
many DNA damage repair and cell cycle checkpoint proteins.
The unique diversity of this domain superfamily allows
BRCT modules to interact forming homo...; Region: BRCT;
cd00027"
/db_xref="CDD:28909"
misc_feature order(315635..315637,315647..315649,315656..315658,
315665..315667,315671..315673)
/gene="ligA"
/locus_tag="BAMEG_0363"
/note="Dimer interface [polypeptide binding]; other site"
/db_xref="CDD:28909"
gene 315825..317018
/locus_tag="BAMEG_0364"
/db_xref="GeneID:7783923"
CDS 315825..317018
/locus_tag="BAMEG_0364"
/note="identified by match to protein family HMM PF07537"
/codon_start=1
/transl_table=11
/product="putative lipoprotein"
/protein_id="YP_002812980.1"
/db_xref="GI:227812971"
/db_xref="GeneID:7783923"
/translation="MKKIALAVLSLGLLVSGCSAGADKDEKVVEKSGKAKEQVIVPNY
SISDEYYKTTIPFEGGNARGLVVQGVSNRLDIDEFETGLMRIAKESFSTKDNVLKGGK
SLTTQYIQMLVKRKRTDAEQKELEDTLKKDAVKFPNIGLNPALGAGSESLEAKNKKNP
IYISNILEHDYYVNKDKKDERSGIVVGLAMNSVHYYEEEHGYPREVTISNEKMLAEGK
KMVPEILKVMHQQDPETKNLPITFAIYRQAPKSSLVPGNFVSYGNVEKGSETVEDWKQ
INEKYYLFPSEQAKTDNKREDLARVSNFKAKLSDYFQGDYTAVIGTGMYRDDELREIK
LDIPVQFNGKAEIIGFTQYVAGLVMEYFPNYMKVQVTIKSVERPEAIIIREAKQDEPY
VKILD"
misc_feature 315990..317003
/locus_tag="BAMEG_0364"
/note="CamS sex pheromone cAM373 precursor; Region: CamS;
pfam07537"
/db_xref="CDD:191776"
gene 317114..317884
/locus_tag="BAMEG_0365"
/db_xref="GeneID:7785859"
CDS 317114..317884
/locus_tag="BAMEG_0365"
/note="identified by match to protein family HMM PF01925"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812981.1"
/db_xref="GI:227812972"
/db_xref="GeneID:7785859"
/translation="MDELSFQVIILLIAFGFLAAFIDSVVGGGGLISLPALMFVGLPP
ASAIATNKLAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVAGALVVKFIPPDI
LRPLVLVMLVFIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTG
SFLIFAFLLIGLDFIQAAASGKLLNFVSNIVSLITFLFLDVIHFEYGIIMGLSMIFGA
YFGSKFAVQKGVGYVRALFLLVTILLISKNVLEYTHIL"
misc_feature 317123..317854
/locus_tag="BAMEG_0365"
/note="Predicted permeases [General function prediction
only]; Region: COG0730; cl00498"
/db_xref="CDD:186038"
misc_feature 317147..317854
/locus_tag="BAMEG_0365"
/note="Sulfite exporter TauE/SafE; Region: TauE;
pfam01925"
/db_xref="CDD:202049"
gene 318038..319585
/locus_tag="BAMEG_0366"
/db_xref="GeneID:7786475"
CDS 318038..319585
/locus_tag="BAMEG_0366"
/note="catalyzes the conversion of 1-proline-5-carboxylate
dehydrogenase to L-glutamate"
/codon_start=1
/transl_table=11
/product="1-pyrroline-5-carboxylate dehydrogenase"
/protein_id="YP_002812982.1"
/db_xref="GI:227812973"
/db_xref="GeneID:7786475"
/translation="MVVAYKHEPFTDFSVEANKLAFEEGLKKVESYLGQDYPLIIGGE
KITTEDKIVSVNPANKEELVGRVSKASRELAEKAMQVADETFQTWRKSKPEMRADILF
RAAAIVRRRKHEFSAILVKEAGKPWNEADADTAEAIDFMEYYGRQMLKLKDGIPVESR
PIEYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFM
EVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPG
QIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYD
HVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRILAGGEGDD
SKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVIS
NNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAGGPDYLALHMQA
KTTSETL"
misc_feature 318038..319582
/locus_tag="BAMEG_0366"
/note="1-pyrroline-5-carboxylate dehydrogenase;
Provisional; Region: PRK03137"
/db_xref="CDD:179543"
misc_feature 318050..319576
/locus_tag="BAMEG_0366"
/note="Delta(1)-pyrroline-5-carboxylate dehydrogenase,
RocA; Region: ALDH_PutA-P5CDH-RocA; cd07124"
/db_xref="CDD:143442"
misc_feature order(318443..318445,318581..318586,318596..318598,
318893..318895,318989..319000,319442..319444,
319457..319459,319463..319468,319487..319489)
/locus_tag="BAMEG_0366"
/note="Glutamate binding site [chemical binding]; other
site"
/db_xref="CDD:143442"
misc_feature order(318509..318511,318515..318517,318530..318538,
318542..318544,318836..318841,318848..318850,
318878..318880,319394..319396,319415..319417,
319424..319426,319430..319447,319451..319453,
319469..319471,319475..319486,319496..319501,
319514..319516,319520..319522,319535..319537,
319544..319546,319556..319576)
/locus_tag="BAMEG_0366"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:143442"
misc_feature order(318569..318574,318650..318652,318656..318661,
318749..318751,318803..318805,318812..318814,
318821..318823)
/locus_tag="BAMEG_0366"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:143442"
misc_feature order(318581..318583,318893..318895,318986..318988,
318995..318997)
/locus_tag="BAMEG_0366"
/note="catalytic residues [active]"
/db_xref="CDD:143442"
gene 319771..319920
/locus_tag="BAMEG_0367"
/db_xref="GeneID:7784653"
CDS 319771..319920
/locus_tag="BAMEG_0367"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812983.1"
/db_xref="GI:227812974"
/db_xref="GeneID:7784653"
/translation="MGKYQLDYKGQVAVAKFHEKQTPVKFDKKQQIEKLRAEYLKKKQ
KQTDK"
gene complement(320152..320715)
/locus_tag="BAMEG_0368"
/db_xref="GeneID:7782008"
CDS complement(320152..320715)
/locus_tag="BAMEG_0368"
/note="identified by match to protein family HMM PF00857"
/codon_start=1
/transl_table=11
/product="isochorismatase family protein"
/protein_id="YP_002812984.1"
/db_xref="GI:227812975"
/db_xref="GeneID:7782008"
/translation="MKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNE
PIFHIQHISIKEDATFFLPNTEGVHIHESVRPLREESVILKHYPNSFRETDLLKQLQR
LAIEHVVICGMMTHMCIDATVRAAFDFGLQCTVIHDACATKDLSFKNATIPAVYIHNT
ILASLNGVYANVMSTEEFLATKKHSLQ"
misc_feature complement(320185..320709)
/locus_tag="BAMEG_0368"
/note="Isochorismatase family; Region: Isochorismatase;
pfam00857"
/db_xref="CDD:201475"
misc_feature complement(320242..320706)
/locus_tag="BAMEG_0368"
/note="Nicotinamidase_ related amidohydrolases. Cysteine
hydrolases of unknown function that share the catalytic
triad with other amidohydrolases, like nicotinamidase,
which converts nicotinamide to nicotinic acid and ammonia;
Region: nicotinamidase_related; cd01014"
/db_xref="CDD:29552"
misc_feature complement(order(320362..320364,320461..320463,
320689..320691))
/locus_tag="BAMEG_0368"
/note="catalytic triad [active]"
/db_xref="CDD:29552"
misc_feature complement(320374..320379)
/locus_tag="BAMEG_0368"
/note="conserved cis-peptide bond; other site"
/db_xref="CDD:29552"
misc_binding 320958..321064
/note="SAM riboswitch (S box leader)"
/bound_moiety="S-adenosyl methionine"
gene 321188..322207
/locus_tag="BAMEG_0370"
/db_xref="GeneID:7784725"
CDS 321188..322207
/locus_tag="BAMEG_0370"
/note="identified by match to protein family HMM PF00005;
match to protein family HMM PF09383"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002812985.1"
/db_xref="GI:227812976"
/db_xref="GeneID:7784725"
/translation="MISFNNVSKVYESGGQSVHAVEDVTLSVEKGEIFGIIGFSGAGK
STLLRLVNMLERPTAGTISIDDKDITSLSTKELRKLRQRIGMIFQSFNLFNSRTVFGN
IAYPLKLAKVPKNEIKERVNELLKFVGLEDKANNYPEQLSGGQKQRVGIARALATSPD
ILICDEATSALDPETTTEILNLLKKVNREYNLTILLITHEMHVVKEICHRVAVMEKGK
VIEEGKLFDVFTQPKTTTTQNFVRSVINDHLPESVLAKIQNGGQIYRLTFTGEETGQP
VLSYIAKNYNVDVNVLYGNIIELQNVLFGNLLVELQGEQREIQKALQHLRLQVQLKEV
EAHAS"
misc_feature 321188..322165
/locus_tag="BAMEG_0370"
/note="DL-methionine transporter ATP-binding subunit;
Provisional; Region: metN; PRK11153"
/db_xref="CDD:183001"
misc_feature 321188..321886
/locus_tag="BAMEG_0370"
/note="ATP-binding cassette domain of methionine
transporter; Region: ABC_MetN_methionine_transporter;
cd03258"
/db_xref="CDD:213225"
misc_feature 321299..321322
/locus_tag="BAMEG_0370"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213225"
misc_feature order(321308..321313,321317..321325,321452..321454,
321680..321685,321782..321784)
/locus_tag="BAMEG_0370"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213225"
misc_feature 321443..321454
/locus_tag="BAMEG_0370"
/note="Q-loop/lid; other site"
/db_xref="CDD:213225"
misc_feature 321608..321637
/locus_tag="BAMEG_0370"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213225"
misc_feature 321668..321685
/locus_tag="BAMEG_0370"
/note="Walker B; other site"
/db_xref="CDD:213225"
misc_feature 321692..321703
/locus_tag="BAMEG_0370"
/note="D-loop; other site"
/db_xref="CDD:213225"
misc_feature 321770..321790
/locus_tag="BAMEG_0370"
/note="H-loop/switch region; other site"
/db_xref="CDD:213225"
misc_feature 321965..322171
/locus_tag="BAMEG_0370"
/note="NIL domain; Region: NIL; pfam09383"
/db_xref="CDD:204224"
gene 322197..322862
/locus_tag="BAMEG_0371"
/db_xref="GeneID:7786120"
CDS 322197..322862
/locus_tag="BAMEG_0371"
/note="identified by match to protein family HMM PF00528"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002812986.1"
/db_xref="GI:227812977"
/db_xref="GeneID:7786120"
/translation="MRVDWSIFWPRILDATGDTLLMVIVTLIFATILGIPLGLLLYVT
RKGNFLENKWVFSILNIIINTIRPIPFIIFLVALSPLTRSVIGTTIGTAAAIFPMTLV
ASIGIARMVETNLVSVPKGVIEAAQAMGASPIRIVFEILVPEALAPLILGVTFMTVGL
IEFSAVAGLVGGGGLGDLAMTYGYQRFDTSVMFVTVVLLIILVQLAQNLGNYFAKVFL
RRS"
misc_feature 322251..>322679
/locus_tag="BAMEG_0371"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(322290..322295,322302..322307,322320..322322,
322359..322370,322374..322403,322410..322415,
322419..322421,322494..322499,322503..322505,
322509..322511,322521..322526,322530..322532,
322542..322547,322554..322556,322605..322607,
322647..322652,322659..322661)
/locus_tag="BAMEG_0371"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature 322377..322421
/locus_tag="BAMEG_0371"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(322557..322595,322611..322616,322626..322628)
/locus_tag="BAMEG_0371"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 322884..323738
/locus_tag="BAMEG_0372"
/db_xref="GeneID:7787138"
CDS 322884..323738
/locus_tag="BAMEG_0372"
/note="identified by match to protein family HMM PF03180"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_002812987.1"
/db_xref="GI:227812978"
/db_xref="GeneID:7787138"
/translation="MKKILAFALSAIVGVSALSGCSSGDTGAGAKEKVVRVGVTGTDG
DAWEILKRKAEKEGIKIKLVEFSDYTTPNKALADGDIELNSFQHIAFLEQFKKEHKLD
ITAVGTTQIAPMGLYSEKHKKANEIPDGSEIAIPNDPTNQARALKLLDAAGLLKLKKD
FGLFGDPSGIAENPKKLKITPVIAQQTPRVLKDVAASVINNGVAGQAGLDPAKDPIFL
EDPKNENAKPYINIFAARTKDKDDPTLKKVIELYHSKEVTDAIKKETNDGSISVDLSL
DELEKIVK"
misc_feature 323022..323699
/locus_tag="BAMEG_0372"
/note="NLPA lipoprotein; Region: Lipoprotein_9; pfam03180"
/db_xref="CDD:146017"
gene complement(323905..324375)
/locus_tag="BAMEG_0373"
/db_xref="GeneID:7786003"
CDS complement(323905..324375)
/locus_tag="BAMEG_0373"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812988.1"
/db_xref="GI:227812979"
/db_xref="GeneID:7786003"
/translation="MLKRISTIIFWIIPLLFFIHNLEESFQMPQYLANQFSITFISSQ
HFFIAISVLTLFVLVIIFLYQLNFLSSIYWIIFIQGAIFFNSVQHIILFFIYRSYNPG
VISAVFIVIFSIFFFSSQKHLIHKKQFVITLVFSLFSYPIIIWITLLLASYFHS"
misc_feature complement(324070..324318)
/locus_tag="BAMEG_0373"
/note="Protein of unknown function with HXXEE motif;
Region: HXXEE; pfam13787"
/db_xref="CDD:205960"
gene complement(324434..324625)
/locus_tag="BAMEG_0374"
/db_xref="GeneID:7786414"
CDS complement(324434..324625)
/locus_tag="BAMEG_0374"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812989.1"
/db_xref="GI:227812980"
/db_xref="GeneID:7786414"
/translation="MHEELLRKIIRTKIKVGMHILEELPAPIQQSAKQMLNILQEELS
SYPNEQGHHKNNLKNIIIE"
misc_feature complement(324443..324574)
/locus_tag="BAMEG_0374"
/note="Protein of unknown function (DUF3926); Region:
DUF3926; pfam13080"
/db_xref="CDD:205261"
gene complement(324670..325248)
/locus_tag="BAMEG_0375"
/db_xref="GeneID:7784523"
CDS complement(324670..325248)
/locus_tag="BAMEG_0375"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="arsenite-activated ATPase ArsA"
/protein_id="YP_002812990.1"
/db_xref="GI:227812981"
/db_xref="GeneID:7784523"
/translation="MDELTNTLEQLGEMRDILSNREVTSIRIVVNPEKMVIKEAQRSF
TYLNLYDYNVDAIMINRVIPNTVTDPYFQAWKDTQKKYKTLIQDSFDPLPIYEAPMFE
QEVVGLPMLERVGDALFKTEPCPTEVKFNGRTQYVKKDGDEYIFVLSIPFSNKSELTL
NQKGDELIIRAGSVKRNITLPKTLTHLSIQGG"
misc_feature complement(324955..>325209)
/locus_tag="BAMEG_0375"
/note="ArsA ATPase functionas as an efflux pump located on
the inner membrane of the cell. This ATP-driven oxyanion
pump catalyzes the extrusion of arsenite, antimonite and
arsenate. Maintenance of a low intracellular concentration
of oxyanion produces...; Region: ArsA; cd02035"
/db_xref="CDD:73298"
gene complement(325290..325799)
/locus_tag="BAMEG_0376"
/db_xref="GeneID:7783736"
CDS complement(325290..325799)
/locus_tag="BAMEG_0376"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift; identified by match to protein family HMM
PF02374"
/codon_start=1
/transl_table=11
/product="arsenite-activated ATPase ArsA"
/protein_id="YP_002812991.1"
/db_xref="GI:227812982"
/db_xref="GeneID:7783736"
/translation="MMRIILYTGKGGVGKTSISAATAIQSAKQGLKTLVMSTDPAHSL
GDSFGVKLSSEPLEIRENLWAQEINTIYEMEKGWGKLQKYITLLFTSKAADDITTEEL
TMFPGMEDLISLLRVLDYYKQNTYDVIIIDCAPTGETLAMLSFPDMLGWWMEKLFPIK
RKVLKLFAL"
misc_feature complement(<325371..325790)
/locus_tag="BAMEG_0376"
/note="ArsA ATPase functionas as an efflux pump located on
the inner membrane of the cell. This ATP-driven oxyanion
pump catalyzes the extrusion of arsenite, antimonite and
arsenate. Maintenance of a low intracellular concentration
of oxyanion produces...; Region: ArsA; cd02035"
/db_xref="CDD:73298"
misc_feature complement(325749..325775)
/locus_tag="BAMEG_0376"
/note="P loop; other site"
/db_xref="CDD:73298"
misc_feature complement(order(325404..325406,325683..325685,
325749..325760,325764..325766))
/locus_tag="BAMEG_0376"
/note="Nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:73298"
misc_feature complement(order(325383..325406,325677..325685))
/locus_tag="BAMEG_0376"
/note="DTAP/Switch II; other site"
/db_xref="CDD:73298"
misc_feature complement(325677..325685)
/locus_tag="BAMEG_0376"
/note="Switch I; other site"
/db_xref="CDD:73298"
gene complement(325876..326358)
/locus_tag="BAMEG_0377"
/db_xref="GeneID:7782605"
CDS complement(325876..326358)
/locus_tag="BAMEG_0377"
/note="identified by match to protein family HMM PF01047"
/codon_start=1
/transl_table=11
/product="MarR family transcriptional regulator"
/protein_id="YP_002812992.1"
/db_xref="GI:227812983"
/db_xref="GeneID:7782605"
/translation="MLQYEHFLDLLLDNAKKLFYPEEWVSLDLTLSKTEVFCLLWMER
NTDITMTKIADLLDIPMSTTTGVVNRLVKKGYIERYRDENDRRIVLIRLTENGVTLVQ
EVKQNAAHYFNLVTEALSEEEKAFLLQIFQKIMNHIATSQQKTEEKVSTPKMKNIPIE
"
misc_feature complement(325987..326295)
/locus_tag="BAMEG_0377"
/note="helix_turn_helix multiple antibiotic resistance
protein; Region: HTH_MARR; smart00347"
/db_xref="CDD:197670"
misc_feature complement(326092..326268)
/locus_tag="BAMEG_0377"
/note="MarR family; Region: MarR; pfam01047"
/db_xref="CDD:201571"
misc_feature complement(325945..>326166)
/locus_tag="BAMEG_0377"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:214025"
gene 326590..326772
/locus_tag="BAMEG_0378"
/db_xref="GeneID:7787207"
CDS 326590..326772
/locus_tag="BAMEG_0378"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift; identified by match to protein family HMM
PF05360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002812993.1"
/db_xref="GI:227812984"
/db_xref="GeneID:7787207"
/translation="MRRRNTQAFTFLAWTSFVCALSGMLIGIYTLDETLSVKGYYLIG
TLFLTMSCFVLQKNNS"
misc_feature 326614..326763
/locus_tag="BAMEG_0378"
/note="yiaA/B two helix domain; Region: YiaAB; pfam05360"
/db_xref="CDD:114102"
gene 326969..327259
/gene="gatC"
/locus_tag="BAMEG_0379"
/db_xref="GeneID:7786954"
CDS 326969..327259
/gene="gatC"
/locus_tag="BAMEG_0379"
/EC_number="6.3.5.-"
/note="allows the formation of correctly charged
Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
which lack either or both of asparaginyl-tRNA or
glutaminyl-tRNA synthetases; reaction takes place in the
presence of glutamine and ATP through an activated
phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma
proteins contain an N-terminal fusion to an unknown
domain"
/codon_start=1
/transl_table=11
/product="aspartyl/glutamyl-tRNA amidotransferase subunit
C"
/protein_id="YP_002812994.1"
/db_xref="GI:227812985"
/db_xref="GeneID:7786954"
/translation="MSRISVENVKHVAHLARLAITDQEAEKFQKQLDAIVTFAEQLNE
LDTTDVKPTTHVLTMKNVMREDVPEKGLPVEEVLKNAPDHKDNQIRVPAVLE"
misc_feature 326972..327256
/gene="gatC"
/locus_tag="BAMEG_0379"
/note="aspartyl/glutamyl-tRNA amidotransferase subunit C;
Reviewed; Region: gatC; PRK00034"
/db_xref="CDD:178810"
gene 327275..328732
/gene="gatA"
/locus_tag="BAMEG_0380"
/db_xref="GeneID:7784759"
CDS 327275..328732
/gene="gatA"
/locus_tag="BAMEG_0380"
/EC_number="6.3.5.-"
/note="allows the formation of correctly charged
Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
which lack either or both of asparaginyl-tRNA or
glutaminyl-tRNA synthetases; reaction takes place in the
presence of glutamine and ATP through an activated
phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA"
/codon_start=1
/transl_table=11
/product="aspartyl/glutamyl-tRNA amidotransferase subunit
A"
/protein_id="YP_002812995.1"
/db_xref="GI:227812986"
/db_xref="GeneID:7784759"
/translation="MSLFDHSVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFL
TLDEENARAKAKELDAKIGAEDNGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIY
DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAA
VAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRT
VEDNAYLLQAISGLDRMDATSANVEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEAR
ESVLAALKVLEGMGATWEEVSLPHSKYALATYYLLSSSEASANLSRFDGVRYGVRSDN
VNNLMDLYKNTRSEGFGDEVKRRIMLGTFALSSGYYDAYYKKAQQVRTLIKNDFENVF
ANYDVIIGPTTPTPAFKVGEKVDDPMTMYANDILTIPVNLAGVPAISVPCGFGANNMP
LGLQIIGKHFDEATIYRVAHAFEQATDHHTKKASL"
misc_feature 327275..328723
/gene="gatA"
/locus_tag="BAMEG_0380"
/note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
and related amidases [Translation, ribosomal structure and
biogenesis]; Region: GatA; COG0154"
/db_xref="CDD:30503"
misc_feature 327317..328693
/gene="gatA"
/locus_tag="BAMEG_0380"
/note="aspartyl/glutamyl-tRNA amidotransferase subunit A;
Reviewed; Region: gatA; PRK00012"
/db_xref="CDD:178793"
gene 328747..330174
/gene="gatB"
/locus_tag="BAMEG_0381"
/db_xref="GeneID:7784494"
CDS 328747..330174
/gene="gatB"
/locus_tag="BAMEG_0381"
/EC_number="6.3.5.-"
/note="allows the formation of correctly charged
Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
which lack either or both of asparaginyl-tRNA or
glutaminyl-tRNA synthetases; reaction takes place in the
presence of glutamine and ATP through an activated
phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA"
/codon_start=1
/transl_table=11
/product="aspartyl/glutamyl-tRNA amidotransferase subunit
B"
/protein_id="YP_002812996.1"
/db_xref="GI:227812987"
/db_xref="GeneID:7784494"
/translation="MNLETIIGLEVHVELKTNSKIFSASPTEFGAEPNTQTSVIDLGY
PGVLPTLNKEAVNFAMKAAMALNCEIATETKFDRKNYFYPDNPKAYQISQFDKPIGEN
GWIEIEVDGKKKRIGITRLHLEEDAGKSTHTADGSLVDYNRQGMPLIEIVSEPDMRTP
EEAYAYLEKLKSIIQYTGVSDCKMEEGSLRCDANISLRPVGQEKFGTKAELKNLNSFT
YVQKGLEHEQVRQEKELLSGGIIQQETRRYDEATKKTILMRVKEGSDDYRYFPEPDLV
ELYIDDAWKEEVRASIPELPDARKARYVAEIGLPAYDAHVLTLTKEMSDFFEAAIADG
ADAKLTSNWLMGEVLAYLNKQQKELKDVALTPAGLSKMVQLIEKGTISSKIAKKVFNE
LIEKGGDPEEIVKAKGLVQISDEGTLRKVVTEILDNNEQSIEDFKNGKDRAIGFLVGQ
IMKATKGQANPPLVNKILLEEINKR"
misc_feature 328747..330162
/gene="gatB"
/locus_tag="BAMEG_0381"
/note="aspartyl/glutamyl-tRNA amidotransferase subunit B;
Validated; Region: gatB; PRK05477"
/db_xref="CDD:180111"
misc_feature 328756..329610
/gene="gatB"
/locus_tag="BAMEG_0381"
/note="GatB/GatE catalytic domain; Region: GatB_N;
pfam02934"
/db_xref="CDD:202476"
misc_feature 329719..330162
/gene="gatB"
/locus_tag="BAMEG_0381"
/note="GatB domain; Region: GatB_Yqey; pfam02637"
/db_xref="CDD:202327"
gene 330645..331550
/locus_tag="BAMEG_0382"
/db_xref="GeneID:7782350"
CDS 330645..331550
/locus_tag="BAMEG_0382"
/note="similar to YegS from E. coli"
/codon_start=1
/transl_table=11
/product="putative lipid kinase"
/protein_id="YP_002812997.1"
/db_xref="GI:227812988"
/db_xref="GeneID:7782350"
/translation="MMKRARIIYNPTSGRELFKKSLPEVLQKLEQAGYEASCHATTGP
GDATVAARQAADRKFDVVIAAGGDGTLNEVVNGLVGHEHRPKFGIIPVGTTNDFARAI
GVPRSIEEAADIICEGKTVPLDLGRANDTYFINIAGGGRITELTYEVPSKLKTVLGQL
AYYLKGIEMLPSLHPTYVEIEYDGKLLQEEITMFLITNTRSVGGFEKVAPYASINDGL
FDLLVLKKGSIADLIKAATQAQRGEHINNPKVLYTQANRIKVHSPDKLMINLDGEYGG
DAPMEFENIYHCLELFVPEHQEDAL"
misc_feature 330648..331547
/locus_tag="BAMEG_0382"
/note="putative lipid kinase; Reviewed; Region: PRK13337"
/db_xref="CDD:183982"
misc_feature 330654..331031
/locus_tag="BAMEG_0382"
/note="Diacylglycerol kinase catalytic domain; Region:
DAGK_cat; pfam00781"
/db_xref="CDD:201440"
gene 331690..332433
/locus_tag="BAMEG_0383"
/db_xref="GeneID:7786416"
CDS 331690..332433
/locus_tag="BAMEG_0383"
/note="identified by match to protein family HMM PF00702;
match to protein family HMM TIGR01549"
/codon_start=1
/transl_table=11
/product="haloacid dehalogenase/epoxide hydrolase family
protein"
/protein_id="YP_002812998.1"
/db_xref="GI:227812989"
/db_xref="GeneID:7786416"
/translation="MEKVKAILFDKDGTLMDFHSIWIKVAEELVAECINLYELPKSMQ
PTLLKEIGVEGVFVNPRSAIAAGTSLDVAKGLCKYITSSKEEEMHEWVSEKLFSLMYE
HRSYMKMTADLPRILQSLKDRGFILGVVTADDFAPTELFLKQYQLESFFDYVVASDTF
PAQKPDKRIVESFCDKFHLDACEVAVVGDTPTDLHLAKNGDCYAIGVLSGTGDRQTLE
PLADLVVQSVEDFISHSGEFIWERGKSNV"
misc_feature 331690..332403
/locus_tag="BAMEG_0383"
/note="Predicted phosphatases [General function prediction
only]; Region: Gph; COG0546"
/db_xref="CDD:30892"
misc_feature <332038..332310
/locus_tag="BAMEG_0383"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature 332080..332082
/locus_tag="BAMEG_0383"
/note="motif II; other site"
/db_xref="CDD:119389"
gene 332516..333952
/gene="gabT"
/locus_tag="BAMEG_0384"
/db_xref="GeneID:7786002"
CDS 332516..333952
/gene="gabT"
/locus_tag="BAMEG_0384"
/EC_number="2.6.1.19"
/note="catalyzes the formation of succinate semialdehyde
and glutamate from 4-aminobutanoate and 2-oxoglutarate"
/codon_start=1
/transl_table=11
/product="4-aminobutyrate aminotransferase"
/protein_id="YP_002812999.1"
/db_xref="GI:227812990"
/db_xref="GeneID:7786002"
/translation="MEKNVGIHFAIKRENNVKKRMGYVMNTKKFAKVNEQIPGPKAAS
LLERRQNIVPKGVSNGIPTFVQSANGALVTDVDGNQYIDFAGAIGTINVGHCHPAVKE
ALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKQVLFLNSGAEAVENAVKIA
RKYTKRPGIIAFSKGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRCPEG
LTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFAQEVRNICSE
HGILFVADEIQTGFSRTGKYFAIDHYDVVPDLITVSKSLGAGVPISGVIGRKEIMNES
APGELGGTYAGSPLGCAAALAVLDVIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGD
VRGLGAMCAFELVQDRKTKTPDKTLTANLCTEANKRGLLLLSAGTYGNVIRVLMPLVI
TDEQLEEGLTIIEESLQICYEKANTARV"
misc_feature 332591..333943
/gene="gabT"
/locus_tag="BAMEG_0384"
/note="4-aminobutyrate aminotransferase; Reviewed; Region:
PRK06918"
/db_xref="CDD:180748"
misc_feature 332648..333913
/gene="gabT"
/locus_tag="BAMEG_0384"
/note="Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The major
groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase;
Region: OAT_like; cd00610"
/db_xref="CDD:99735"
misc_feature order(332957..332965,333041..333046,333050..333052,
333266..333268,333365..333367,333371..333376,
333452..333454)
/gene="gabT"
/locus_tag="BAMEG_0384"
/note="inhibitor-cofactor binding pocket; inhibition site"
/db_xref="CDD:99735"
misc_feature order(332960..332965,333041..333046,333266..333268,
333365..333367,333374..333376,333452..333454)
/gene="gabT"
/locus_tag="BAMEG_0384"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature 333452..333454
/gene="gabT"
/locus_tag="BAMEG_0384"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene 334065..335432
/locus_tag="BAMEG_0385"
/db_xref="GeneID:7785119"
CDS 334065..335432
/locus_tag="BAMEG_0385"
/note="identified by match to protein family HMM PF00158;
match to protein family HMM PF07728; match to protein
family HMM PF08448; match to protein family HMM TIGR00229"
/codon_start=1
/transl_table=11
/product="sensory box sigma-54 dependent DNA-binding
response regulator"
/protein_id="YP_002813000.1"
/db_xref="GI:227812991"
/db_xref="GeneID:7785119"
/translation="MVAEKERVLMDLQDVFEYAFDEIFVTDDKGIVVRVNSTCERHYQ
IAAKELVGKHVKELQKDGIFYPSATLEVIEKKRPIELVQTTKSGEYLHVRTRPVFDDE
GNLRRVISYSRDLTELYQLRQKVEEMDNQLKTYKKELRETYEHEGLIFKSIAMQKIIE
TIKKVSVVDSTVLVLGETGVGKSRLVRHLHEMSNRKNESFYEINCAALPTNLIESELF
GYSGGSFTGANREGKKGLLESAHKGTLFLDEIGEMPLEIQAKLLQVLQEKTFRPIGGR
ELKKVDVRIVAATNRDLSMMVKQGTFRKDLYYRLNVIPILIPPLRERTEDILPLIYHY
LQHFNEKYGRNVKLAPSTLQMFVGYPWEGNNREIENVIERIVITADDIVTIEDLPIAM
QESTVEQSGQSLYKMLEEVERNIILKAYKTYGSSYKVAEFLKISQSAATRKIKKLIEE
EENIG"
misc_feature 334131..334415
/locus_tag="BAMEG_0385"
/note="PAS domain; Region: PAS_9; pfam13426"
/db_xref="CDD:205604"
misc_feature 334131..334409
/locus_tag="BAMEG_0385"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(334167..334169,334179..334181,334197..334199,
334236..334247,334311..334313,334326..334328)
/locus_tag="BAMEG_0385"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(334227..334229,334239..334241,334263..334265,
334347..334349)
/locus_tag="BAMEG_0385"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature <334404..335390
/locus_tag="BAMEG_0385"
/note="Response regulator containing CheY-like receiver,
AAA-type ATPase, and DNA-binding domains [Signal
transduction mechanisms]; Region: AtoC; COG2204"
/db_xref="CDD:32386"
misc_feature 334521..335021
/locus_tag="BAMEG_0385"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 334590..334613
/locus_tag="BAMEG_0385"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(334593..334616,334806..334808,334932..334934)
/locus_tag="BAMEG_0385"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 334794..334811
/locus_tag="BAMEG_0385"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 334989..334991
/locus_tag="BAMEG_0385"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene 335425..336876
/gene="gabD"
/locus_tag="BAMEG_0386"
/db_xref="GeneID:7781913"
CDS 335425..336876
/gene="gabD"
/locus_tag="BAMEG_0386"
/EC_number="1.2.1.16"
/note="identified by match to protein family HMM PF00171;
match to protein family HMM TIGR01780"
/codon_start=1
/transl_table=11
/product="succinate-semialdehyde dehydrogenase"
/protein_id="YP_002813001.1"
/db_xref="GI:227812992"
/db_xref="GeneID:7781913"
/translation="MDKKATFVNVEKKAMYINGEWITLQEQIEVNNPATKEIFATVPK
GGVTEAKQAVDAAHEAFKSWSKLTAADRAAKLKKWFTLIDENKEEIAAIMTKEQGKPF
AEALGEVNYANSFVEWYAEEGKRVYGEMIPASHPNKRILVMKQPVGVMAAITPWNFPA
AMITRKVAPALAAGCTAVVKPASQTPLTALKLAELAHEADIPKGVINIVTGSAKAIAD
TWMEDGRVRKVSFTGSTEIGKELMASAAQTMKKVSLELGGHAPFIVMNDADLDKAVEA
VIGSKFRNAGQTCICTNRVFVQEEVYEAFVEKFEKAVGQLKVGDGFGDGTTVGPLIDE
NAVSKVQEHIEDAIQKGGTVLYGGQKVAELDGHFMQPTVIGLANDTMLCMNEETFGPV
APVAKFKTVEEVIERANHTPYGLAAYIFTKDISQAFQISEALEYGIIGLNDGLPSVAQ
APFGGFKESGIGREGGHFGIEEYLEIKYISLGL"
misc_feature 335473..336870
/gene="gabD"
/locus_tag="BAMEG_0386"
/note="succinic semialdehyde dehydrogenase; Region:
PLN02278"
/db_xref="CDD:177917"
misc_feature 335512..336867
/gene="gabD"
/locus_tag="BAMEG_0386"
/note="Mitochondrial succinate-semialdehyde dehydrogenase
and ALDH family members 5A1 and 5F1-like; Region:
ALDH_F5_SSADH_GabD; cd07103"
/db_xref="CDD:143421"
misc_feature order(335626..335628,335653..335655,335776..335778,
335785..335790,335794..335820,335836..335844,
335857..335859,336103..336105,336139..336141,
336151..336153,336160..336162,336331..336333,
336343..336345,336481..336483,336688..336690,
336694..336699,336709..336711,336715..336717,
336724..336726,336730..336750,336766..336768,
336775..336780,336796..336798,336811..336813,
336847..336867)
/gene="gabD"
/locus_tag="BAMEG_0386"
/note="tetramerization interface [polypeptide binding];
other site"
/db_xref="CDD:143421"
misc_feature order(335881..335895,335917..335919,335962..335964,
335968..335973,336115..336126,336133..336135,
336142..336147,336187..336195,336289..336291,
336583..336585,336589..336591,336667..336669,
336781..336783)
/gene="gabD"
/locus_tag="BAMEG_0386"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:143421"
misc_feature order(335893..335895,336187..336189,336280..336282,
336289..336291)
/gene="gabD"
/locus_tag="BAMEG_0386"
/note="catalytic residues [active]"
/db_xref="CDD:143421"
gene 336924..337247
/locus_tag="BAMEG_0387"
/db_xref="GeneID:7785613"
CDS 336924..337247
/locus_tag="BAMEG_0387"
/note="identified by match to protein family HMM PF00893"
/codon_start=1
/transl_table=11
/product="multidrug resistance protein, Smr family"
/protein_id="YP_002813002.1"
/db_xref="GI:227812993"
/db_xref="GeneID:7785613"
/translation="MVYWLLLLVTIIFEVAGTIAMKLSNGLTKLVPSVLIFVFYGICF
SVFAIVVKKIHLSIAYAIWSGVGTLLITIISVYFFKEHISLFQACCILFIVLGVIGLK
VSSAS"
misc_feature 336924..337238
/locus_tag="BAMEG_0387"
/note="Membrane transporters of cations and cationic drugs
[Inorganic ion transport and metabolism]; Region: EmrE;
COG2076"
/db_xref="CDD:32259"
gene complement(337287..338516)
/gene="ampS"
/locus_tag="BAMEG_0388"
/db_xref="GeneID:7782771"
CDS complement(337287..338516)
/gene="ampS"
/locus_tag="BAMEG_0388"
/EC_number="3.4.11.-"
/note="identified by match to protein family HMM PF02073"
/codon_start=1
/transl_table=11
/product="aminopeptidase AmpS"
/protein_id="YP_002813003.1"
/db_xref="GI:227812994"
/db_xref="GeneID:7782771"
/translation="MSFEQTLEKYAALAVNVGVNIQPGQTLSISAPLEAVQFVRLVTE
KAYKSGAKHVYVDWNDETLTRLKFDLAPEEAFAEFPSWKANAREELAKEGAAFMSIYA
ENPDLLKGVDSTRIATAHKVAGEAMKVYRDYVQADKVSWCVISVPTKEWAAKVFPDAA
PEEQEAKLWDAIFKATRADLENPVEAWKEHDKTLHTKVDYLNEKHYKALHYTGPGTDL
TIELPEKHVWAGAGSLNEKNVPFMANIPTEEVFTMPLKTGVNGQVSSTKPLAFAGNII
DNFTLTFENGRIVDYKAEVGEEALKHLVETDEGSHFLGEVALVPHDSPISNTNILFYN
TLFDENASCHLAIGSAYAFNLVGGKTMSKEELAENGANTSITHNDFMIGSAKLDIDGI
TADGRHEPIFRKGNWAF"
misc_feature complement(337296..338513)
/gene="ampS"
/locus_tag="BAMEG_0388"
/note="Thermophilic metalloprotease (M29); Region:
Peptidase_M29; pfam02073"
/db_xref="CDD:145308"
gene complement(338633..339715)
/locus_tag="BAMEG_0389"
/db_xref="GeneID:7786523"
CDS complement(338633..339715)
/locus_tag="BAMEG_0389"
/note="identified by match to protein family HMM PF01522"
/codon_start=1
/transl_table=11
/product="polysaccharide deacetylase-like protein"
/protein_id="YP_002813004.1"
/db_xref="GI:227812995"
/db_xref="GeneID:7786523"
/translation="MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQ
EQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIWRTADGKETAKSLSSKEKEKQFS
LPFDTKEFEGKRGEFQIEAIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGI
KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVL
QKLKDDTFKPVATEYMIVNNVDAEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITN
YEEELKESKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQFATTTKPGKFITKGE
PDELLKMKRVRIHHTTTVEQFASSIK"
misc_feature complement(338660..339223)
/locus_tag="BAMEG_0389"
/note="Predicted xylanase/chitin deacetylase [Carbohydrate
transport and metabolism]; Region: CDA1; COG0726"
/db_xref="CDD:31070"
misc_feature complement(338669..339121)
/locus_tag="BAMEG_0389"
/note="Putative catalytic NodB homology domain of PgaB,
IcaB, and similar proteins which consist of a deformed
(beta/alpha)8 barrel fold with 5- or 6-strands; Region:
CE4_NodB_like_5s_6s; cd10918"
/db_xref="CDD:213023"
misc_feature complement(order(338804..338812,338912..338914,
338924..338926,339098..339103))
/locus_tag="BAMEG_0389"
/note="putative active site [active]"
/db_xref="CDD:213023"
misc_feature complement(order(338912..338914,338924..338926,
339098..339100))
/locus_tag="BAMEG_0389"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:213023"
gene complement(339867..340970)
/locus_tag="BAMEG_0390"
/db_xref="GeneID:7786708"
CDS complement(339867..340970)
/locus_tag="BAMEG_0390"
/note="identified by match to protein family HMM PF01522"
/codon_start=1
/transl_table=11
/product="polysaccharide deacetylase"
/protein_id="YP_002813005.1"
/db_xref="GI:227812996"
/db_xref="GeneID:7786708"
/translation="MKKYTYIALLSSAILVGCNTSSASDKQIQETTAKQAVEQKKAKA
VELPLTQGVITWDPYEYNAQNTTLYTKDLRDSFKEVRYNIWRTADGPESKQTFTSQEK
DRDFALPLHLKTFHLKRGEFQIETVGIKEDNTETNLVTSKITFQQHVPVLMYHAIEKF
PGPSDGDYGLYVPPEQFEKHMQYLKDNGYTMLTFERWNDINRVNKPIFITMDDGRKNN
MNALHILQKLKDDTFQPAATEFLTANEIDKPNRLSTDDIKQMMDSGIFSIQSHTANHT
MMAHSNNYDEELRGSKEKIEALTGKKVIALAYPVGSYNDPAVEETKKYYEFAVTTDHG
NHITKGMPNEQYLIKRHFVGPNTSMEKFISLIK"
misc_feature complement(<339999..340523)
/locus_tag="BAMEG_0390"
/note="Predicted xylanase/chitin deacetylase [Carbohydrate
transport and metabolism]; Region: CDA1; COG0726"
/db_xref="CDD:31070"
misc_feature complement(339903..340355)
/locus_tag="BAMEG_0390"
/note="Putative catalytic NodB homology domain of PgaB,
IcaB, and similar proteins which consist of a deformed
(beta/alpha)8 barrel fold with 5- or 6-strands; Region:
CE4_NodB_like_5s_6s; cd10918"
/db_xref="CDD:213023"
misc_feature complement(order(340038..340046,340146..340148,
340158..340160,340332..340337))
/locus_tag="BAMEG_0390"
/note="putative active site [active]"
/db_xref="CDD:213023"
misc_feature complement(order(340146..340148,340158..340160,
340332..340334))
/locus_tag="BAMEG_0390"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:213023"
gene complement(341210..342406)
/locus_tag="BAMEG_0391"
/db_xref="GeneID:7783218"
CDS complement(341210..342406)
/locus_tag="BAMEG_0391"
/note="identified by match to protein family HMM PF01773;
match to protein family HMM PF07662; match to protein
family HMM PF07670"
/codon_start=1
/transl_table=11
/product="nucleoside transporter, NupC family"
/protein_id="YP_002813006.1"
/db_xref="GI:227812997"
/db_xref="GeneID:7783218"
/translation="MQYVMSIIGILVVLGLCFALSNNKSKINFRAIAIMIGFQILIGW
FMFGTKIGQQIIIFISKVFNKLIKLGTTGVDFLFNGIQRDFVFFLNVLLIIVFFSALL
SIFSYLGVLPFIVRVVGGAISKVTGLPRVESFHAVNSVFFGSSEALIVIKNDLQHFNK
NRMFIICCSAMSSVSASVTASYVMMLDAKYVLAALPLNLFSSLIVCSLLTPVDTKKED
EVVQKFDRTVFGDSFIGAMINGALDGLKVAGIVAALMIAFIGVMEVVNYVISAASGAM
GHAVTLQQIFGYVLAPFAFLMGIPAQDIIPAGGIMGTKIVLNEFVAILDLKGVAATLS
PRTVGIVTVFLISFASISQIGAIVGTIRALSEKQGSIVSKFGWKMLFASTLASILSAT
IAGLFI"
misc_feature complement(341213..342406)
/locus_tag="BAMEG_0391"
/note="Nucleoside permease [Nucleotide transport and
metabolism]; Region: NupC; COG1972"
/db_xref="CDD:32155"
misc_feature complement(342164..342385)
/locus_tag="BAMEG_0391"
/note="Na+ dependent nucleoside transporter N-terminus;
Region: Nucleos_tra2_N; pfam01773"
/db_xref="CDD:201962"
misc_feature complement(341213..341839)
/locus_tag="BAMEG_0391"
/note="Na+ dependent nucleoside transporter C-terminus;
Region: Nucleos_tra2_C; pfam07662"
/db_xref="CDD:203714"
misc_binding complement(342608..342710)
/note="Purine riboswitch"
/bound_moiety="guanine and/or adenine"
gene 342832..344208
/locus_tag="BAMEG_0393"
/db_xref="GeneID:7784170"
CDS 342832..344208
/locus_tag="BAMEG_0393"
/note="identified by match to protein family HMM PF01938;
match to protein family HMM PF02475; match to protein
family HMM PF05958; match to protein family HMM TIGR00479"
/codon_start=1
/transl_table=11
/product="TrmA family RNA methyltransferase"
/protein_id="YP_002813007.1"
/db_xref="GI:227812998"
/db_xref="GeneID:7784170"
/translation="MSTKMTPPVEKNEFIDVVFEDLTHDGAGVAKVKGYPIFVKNGLP
GEEAQIKIVKVKKNFAFGRLMKLHTESPYRKDAECPVYNQCGGCQLQHLTYEGQLQAK
EKQVRDVMQRIGGLGDVPVHPVLGMKNPWVYRNKAQVPIGEREGGLVAGFYRQGTHDI
INMESCLIQAEENDTLIQEVKRICEKHGISAYNEERNKGTLRHVMARYGQVTGEIMLV
FITRTAELPNKKAIIEEIAAKFPEVKSIVQNVNPKRTNVIFGDKTTVLYGSEYIYDFI
GDIKFAISARSFYQVNPEQTKVLYDKTLEYAKLDGNETVIDAYCGIGSISLFLAQKAK
KVYGVEIVPEAIEDAKRNAALNNMTNAEFGVGEAEVVIPKWYKEGVIADTMVVDPPRK
GCDEALLNTIIDMKPKRVVYVSCNPATLARDLKVLEEGGYKTQEVQLVDMFPHTTHVE
CVAWLKLV"
misc_feature 342835..343023
/locus_tag="BAMEG_0393"
/note="Predicted RNA-binding protein, contains TRAM domain
[General function prediction only]; Region: COG3269"
/db_xref="CDD:33080"
misc_feature 342895..344181
/locus_tag="BAMEG_0393"
/note="23S rRNA (uracil-5-)-methyltransferase RumA;
Region: rumA; TIGR00479"
/db_xref="CDD:129571"
misc_feature 343771..>344001
/locus_tag="BAMEG_0393"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(343783..343803,343849..343854,343927..343935,
343993..343995)
/locus_tag="BAMEG_0393"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 344305..345294
/locus_tag="BAMEG_0394"
/db_xref="GeneID:7786942"
CDS 344305..345294
/locus_tag="BAMEG_0394"
/note="identified by match to protein family HMM PF01207"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813008.1"
/db_xref="GI:227812999"
/db_xref="GeneID:7786942"
/translation="MIDNFWRDLPRPFFVLAPMEDVTDVVFRHVVSEAGRPDVFFTEF
TNSDSYCHPEGMKSVRGRLIFTEDEQPMVAHIWGDNPEYFRQMSIGMAELGFKGIDIN
MGCPVPNVASRGKGSGLILRPDVAAELIQAAKAGGLPVSVKTRLGFKELSEWEDWLTH
IFKQDIANLSIHLRTREEMSQVDAHWELIPEIKKLRDRIAPNTLLTINGDIPDRKTGL
ELAEKYGIDGVMIGRGIFKNPFAFEKEPREHSSKEHLDLLRLQLDLQDQYAEVLPRSI
TGLHRFFKIYVKGFPGAAELRNQLMSTKSTDEVRALLNKFEESVNVVEGSETV"
misc_feature 344314..345264
/locus_tag="BAMEG_0394"
/note="tRNA-dihydrouridine synthase [Translation,
ribosomal structure and biogenesis]; Region: COG0042"
/db_xref="CDD:30391"
misc_feature 344344..345051
/locus_tag="BAMEG_0394"
/note="Dihydrouridine synthase-like (DUS-like) FMN-binding
domain. Members of this family catalyze the reduction of
the 5,6-double bond of a uridine residue on tRNA.
Dihydrouridine modification of tRNA is widely observed in
prokaryotes and eukaryotes, and also...; Region:
DUS_like_FMN; cd02801"
/db_xref="CDD:73368"
misc_feature order(344353..344361,344434..344436,344527..344529,
344608..344610,344731..344733,344818..344820,
344926..344928,344932..344934,344998..345003)
/locus_tag="BAMEG_0394"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73368"
misc_feature order(344527..344529,344617..344622,344731..344733,
344737..344739,344815..344820,344824..344829,
344929..344934,345001..345003)
/locus_tag="BAMEG_0394"
/note="active site"
/db_xref="CDD:73368"
misc_feature order(344617..344619,344737..344739,344818..344820,
344824..344826)
/locus_tag="BAMEG_0394"
/note="catalytic residues [active]"
/db_xref="CDD:73368"
misc_feature order(344620..344622,344731..344733,344815..344817,
344827..344829,344929..344934)
/locus_tag="BAMEG_0394"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73368"
gene 345555..346124
/locus_tag="BAMEG_0395"
/db_xref="GeneID:7784359"
CDS 345555..346124
/locus_tag="BAMEG_0395"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813009.1"
/db_xref="GI:227813000"
/db_xref="GeneID:7784359"
/translation="MGKVEVKKKKKLSVMKFLIYMLIAIVVINWIYKTPEEKKADLEE
KVASYEEFESHCITYEDWNVDKGGNKNLNTLYNDPQECLEKELFIWRNDGTELTRGVA
KLVFHNTDYYFTEEELKDDIQTEAENKYKLLEEIQRECKSTLLGGFSYDYYTDGYDYI
IEDTSGEKSKMNEKIFNSLFEITKTYKNN"
gene 346397..346915
/locus_tag="BAMEG_0396"
/db_xref="GeneID:7784847"
CDS 346397..346915
/locus_tag="BAMEG_0396"
/note="identified by match to protein family HMM PF07308"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813010.1"
/db_xref="GI:227813001"
/db_xref="GeneID:7784847"
/translation="MAMSNNDILKRVRYALDIRDIDMVEIFKLGGIEVTKEDVVDMLT
KIKRAPQYEPENPDVEEDEYVKTCDMMMLEAFFNGFITLKRGKQDPKPGQPAPVQSKE
SANNLLLKKMKIALSLTSEDVLDILDSVGVKVTKGELGALLRKKGHKNYKECGDRYAR
NFIKGLAVKYRG"
misc_feature 346403..346912
/locus_tag="BAMEG_0396"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4807"
/db_xref="CDD:34416"
misc_feature 346409..346654
/locus_tag="BAMEG_0396"
/note="Protein of unknown function (DUF1456); Region:
DUF1456; pfam07308"
/db_xref="CDD:203609"
misc_feature 346709..346912
/locus_tag="BAMEG_0396"
/note="Protein of unknown function (DUF1456); Region:
DUF1456; pfam07308"
/db_xref="CDD:203609"
gene 347010..347717
/locus_tag="BAMEG_0397"
/db_xref="GeneID:7787513"
CDS 347010..347717
/locus_tag="BAMEG_0397"
/note="identified by match to protein family HMM PF01863"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813011.1"
/db_xref="GI:227813002"
/db_xref="GeneID:7787513"
/translation="MIHTYLGETINFHITYKKKKSVRLFVDSYGNVEVQAPKGTPVEY
LIQLLEEKWDWIQTTRKEMAERARGPQEKDYDQGEGFLYLGNTYPIQISQDASIEQDN
AIFEGDKLHIYVKELKDEKIQQALKRFYYKQCKSLVGKSIKAHQSNFKTKPRSIRITD
SSRTWGTCDSNLQLTFNWKLAMAPQRVIDYVVVHEMCHMVHLNHDRSFWRLVGKIMPD
YKEMENWLALSSWKMTV"
misc_feature 347067..347687
/locus_tag="BAMEG_0397"
/note="Protein of unknown function DUF45; Region: DUF45;
pfam01863"
/db_xref="CDD:145171"
gene complement(347917..348612)
/locus_tag="BAMEG_0398"
/db_xref="GeneID:7782981"
CDS complement(347917..348612)
/locus_tag="BAMEG_0398"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813012.1"
/db_xref="GI:227813003"
/db_xref="GeneID:7782981"
/translation="MTVLYEGRLKQNNERFHVTLLSLEYIEQILLLQNVVVEALEDKS
RLQPLSQEEFQYILEGNGMMIGAFIENELIAFRALLVPPIDDEHLGLDIGLPESELHR
VIYQEISNVHPNCRGNGMQKILATVIMDELQKEDSKYDYVCCTVAPFNIPSLKDKFAQ
GMKIAALKEKYGGSMRYVFVKELREDNERDWTDIKSIPMNNAGGQQALLSEGYRGYKM
EKVDEDFVVKFGR"
gene complement(348627..349736)
/locus_tag="BAMEG_0399"
/db_xref="GeneID:7783073"
CDS complement(348627..349736)
/locus_tag="BAMEG_0399"
/note="identified by match to protein family HMM PF01188;
match to protein family HMM PF02746"
/codon_start=1
/transl_table=11
/product="mandelate racemase/muconate lactonizing protein"
/protein_id="YP_002813013.1"
/db_xref="GI:227813004"
/db_xref="GeneID:7783073"
/translation="MKITAIHLYAIRLPLRDPFVISYGSYSDMPSIIVKMETDEGIIG
YGEGVADDHVTGESWESTFHILKHTLAPALIGQNPMNIEKIHDMMDNTIYGVPTAKAA
IDIACFDIMGKKLNQPVYQLIGGRYHEEFPITHVLSIADPEEMAEEAASMIQKGYQSF
KMKVGTNVKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLMALRSLGHLNIDWIE
QPVIADDIDAMAHIRSKTDLPLMIDEGLKGSREMRQIINLDAADKVNIKLMKCGGIYP
AVKLAHQAEMAGIECQVGSMVESSVASSAGFHVAFSKKIITSVELTGPLKFTKDIGNL
HYDVPFIRLNEKPGLGIEINEDTLRELTVFQDIVR"
misc_feature complement(348648..349736)
/locus_tag="BAMEG_0399"
/note="L-alanine-DL-glutamate epimerase and related
enzymes of enolase superfamily [Cell envelope biogenesis,
outer membrane / General function prediction only];
Region: COG4948"
/db_xref="CDD:34556"
misc_feature complement(348756..349724)
/locus_tag="BAMEG_0399"
/note="L-Ala-D/L-Glu epimerase catalyzes the epimerization
of L-Ala-D/L-Glu and other dipeptides. The genomic context
and the substrate specificity of characterized members of
this family from E.coli and B.subtilis indicates a
possible role in the metabolism of...; Region:
L-Ala-DL-Glu_epimerase; cd03319"
/db_xref="CDD:48194"
misc_feature complement(order(348771..348773,348777..348779,
348846..348848,348852..348854,349008..349010,
349083..349085,349164..349166,349248..349250,
349254..349256,349329..349331,349665..349667))
/locus_tag="BAMEG_0399"
/note="active site"
/db_xref="CDD:48194"
gene 349829..351100
/locus_tag="BAMEG_0401"
/db_xref="GeneID:7787177"
CDS 349829..351100
/locus_tag="BAMEG_0401"
/codon_start=1
/transl_table=11
/product="transcriptional regulator domain-containing
protein"
/protein_id="YP_002813014.1"
/db_xref="GI:227813005"
/db_xref="GeneID:7787177"
/translation="MMIKIAVVGSKEFMETLLPIAHKLEEIEIDPYVYLHPAESSELL
KRLKPCDFIFFSGALPYYMAKEIREQLRIPSTYLQQDETTVASSILSVMYHQGIQPHK
ISIDLVDRSFIINVFHDIGIKESPQVFDYENMLWSKDEINRVIDFHVAKYQSGKAHLA
LTSIHAVYDELQKIGIPSERMIDLKQSIIHGLKDAKIKAELARSHSATVGACIISSLE
LRDGLLEQLDVISKELRGSFKTIDEMTFILYTTRGDIESIIKTNIINNLFASIEGMIA
IGFGYGKTVKEAEQNAKIAQGFAKNNPIDHCFYILTSDKELFGPFPKEQRVQSLKNDN
PELMKIAKETKLSPANLSKIIQFSQSHPSLKFTAADLSEYLQVTRRSTERLLKKLVDY
GYVHICGEEMPYQQGRPRAIYELNLPLSLSF"
gene complement(351089..352510)
/gene="nhaC1"
/locus_tag="BAMEG_0400"
/db_xref="GeneID:7784420"
CDS complement(351089..352510)
/gene="nhaC1"
/locus_tag="BAMEG_0400"
/note="identified by match to protein family HMM PF03553;
match to protein family HMM PF03600; match to protein
family HMM TIGR00931"
/codon_start=1
/transl_table=11
/product="Na+/H+ antiporter NhaC"
/protein_id="YP_002813015.1"
/db_xref="GI:227813006"
/db_xref="GeneID:7784420"
/translation="MKKEIPFGVAMIPIIITVAVMMVTIVVLKQSPHVPLIIGTTVAS
IVAWRYGYKWNDIEEAMYKGIHLALPAIVIIILVGLTIGAWIGGGIVATMIYYGLNLL
TPSLFLVSITIICSIVALAIGSSWSTMGTIGVAGMGIGLSMGIPAPMVAGAIISGSYF
GDKMSPLSDTTNLAAGLTNTDLFTHIRHMLFTTIPGLIITLIVYAFLGRSFGANNIDA
KSIEQTLQVLQQNFVISPFLLIIPVVVMVLVAKKVPAIPAILVGIILGFLSQVFIQGG
SVSASVGALQAGFVIDTGNKLVDELFNRGGLDSMMNTVSMTIVAMTFGGVLEHTGILR
SIVNQILKLAKSAKGLIASTIASCFATNLTCSEQYISIVVPSRMYANAYTEKGLHSKN
LSRALEDGGTLTSVFVPWNTCGVFILATLGVGAFEYAPYAILNFIVPIISIIYGITGL
TITKLSDIEKAELLKKQNAQLEA"
misc_feature complement(351146..352429)
/gene="nhaC1"
/locus_tag="BAMEG_0400"
/note="Na+/H+ antiporter NhaC; Region: antiport_nhaC;
TIGR00931"
/db_xref="CDD:188097"
gene 352790..353905
/gene="amhX"
/locus_tag="BAMEG_0402"
/db_xref="GeneID:7786045"
CDS 352790..353905
/gene="amhX"
/locus_tag="BAMEG_0402"
/EC_number="3.5.1.-"
/note="identified by match to protein family HMM PF01546;
match to protein family HMM PF07687; match to protein
family HMM TIGR01891"
/codon_start=1
/transl_table=11
/product="amidohydrolase amhX"
/protein_id="YP_002813016.1"
/db_xref="GI:227813007"
/db_xref="GeneID:7786045"
/translation="MKTLELQERLTEIFQHLHENPEVSWKEYETTAYITNFLKEEGIS
YKTFDDCPGVIAEIGNGNPVVAIRADMDALWQEVNGEFKANHSCGHDAHMTIVMGLIL
QLKNMRWKSGTVRFIFQPAEEKGNGALKMVEKGAVDDADFLFGVHLRPIEELSLKQAA
SSIRHGAAGFLEGTIHGEDAHGARPHQGINAIDVISMINIGLKNIWLRPQSSYSVKMT
RCQAGGDNLNIIPGNGHFSLDVRAENNTLLEELKKRIEHVIESAASMGSKTSYEWIDL
APGAEVSEEAERFMRKGILEVYGEDKCTGPLYTTGSDDFHYYTVKRPYLKAVMLGLGA
DLQPGLHHPYMKFDHSCIMDGVEILKQTVLKVLEDRG"
misc_feature 352802..353884
/gene="amhX"
/locus_tag="BAMEG_0402"
/note="M20 Peptidase Aminoacylase 1 amhX_like subfamily;
Region: M20_Acy1_amhX_like; cd08018"
/db_xref="CDD:193565"
misc_feature 352817..353845
/gene="amhX"
/locus_tag="BAMEG_0402"
/note="amidohydrolase; Region: amidohydrolases; TIGR01891"
/db_xref="CDD:162584"
misc_feature order(353051..353053,353057..353059,353156..353158,
353228..353230,353810..353812)
/gene="amhX"
/locus_tag="BAMEG_0402"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193565"
misc_feature order(353297..353299,353363..353368,353378..353380,
353387..353389,353396..353398,353438..353458,
353471..353476,353480..353482,353498..353506)
/gene="amhX"
/locus_tag="BAMEG_0402"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:193565"
gene 354057..354665
/locus_tag="BAMEG_0403"
/db_xref="GeneID:7783355"
CDS 354057..354665
/locus_tag="BAMEG_0403"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813017.1"
/db_xref="GI:227813008"
/db_xref="GeneID:7783355"
/translation="MNEQYYDAVLNIKTVGEQKGFNKSMHYHRYEPTPYSGLDELLNQ
YEIKRSDRVVDFGCGKGRLNFYMHHKCGASAVGIEMNEEFYKEALDNLDRYARKVRDS
KDKIRFECCLAQEYEINPCDNRFYFFNPFSVQVFMNVVNNILLSVEETGREVDIILYY
PSEDYIFFLENQTTFELKREVRLPGAYEKNGNERFLVYTLGL"
misc_feature 354210..>354422
/locus_tag="BAMEG_0403"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(354222..354242,354291..354296,354387..354389)
/locus_tag="BAMEG_0403"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(354710..356236)
/gene="ahpF"
/locus_tag="BAMEG_0404"
/db_xref="GeneID:7784636"
CDS complement(354710..356236)
/gene="ahpF"
/locus_tag="BAMEG_0404"
/note="identified by match to protein family HMM PF00070;
match to protein family HMM PF01134; match to protein
family HMM PF07992; match to protein family HMM TIGR03140"
/codon_start=1
/transl_table=11
/product="alkyl hydroperoxide reductase"
/protein_id="YP_002813018.1"
/db_xref="GI:227813009"
/db_xref="GeneID:7784636"
/translation="MILDADIKTQLSQYLQLMENDILLKVSAGNDDVSKDMLALVDEL
ATMSSKITVEKVELERTPSFSVNRPGEDTGVVFAGIPLGHEFTSLVLALLQVSGRAPK
VEQKLIDQIKNIQGEYHFESYISLSCHNCPDVVQALNVMSVLNSGITHTMIDGAAFKE
EVESKDIMAVPTVFLNGESFGSGRMTLEEILAKMGNGPDASELSDKDPYDVLVVGGGP
AGASAAIYAARKGIRTGIVAERFGGQVMDTMGIENFISVKRTEGPKLVASLEEHVKEY
DIDVMNLQRAKRLEKKELIEVELENGAILKSKSVIVSTGARWRNVGVPGEAEFKNKGV
AYCPHCDGPLFTGKDVAVIGGGNSGIEAAIDLAGIVKHVTVLEFMPELKADAVLQERL
NSLPNVTVLKNVQTKEITGTDKVNGISYIDRETEEVHHVELQGVFVQIGLVPNTDWLG
ETVERVRGEIVTDKHGATNVPGVFAAGDCTNNPYKQIIISMGSGANAALGAFDYLIRN
"
misc_feature complement(354713..356233)
/gene="ahpF"
/locus_tag="BAMEG_0404"
/note="alkyl hydroperoxide reductase subunit F;
Provisional; Region: PRK15317"
/db_xref="CDD:185217"
misc_feature complement(355955..356233)
/gene="ahpF"
/locus_tag="BAMEG_0404"
/note="Alkyl hydroperoxide reductase F subunit (AhpF)
N-terminal domain (NTD) family, N-terminal TRX-fold
subdomain; AhpF is a homodimeric flavoenzyme which
catalyzes the NADH-dependent reduction of the
peroxiredoxin AhpC, which in turn catalyzes the
reduction...; Region: AhpF_NTD_N; cd02974"
/db_xref="CDD:48523"
misc_feature complement(355982..355984)
/gene="ahpF"
/locus_tag="BAMEG_0404"
/note="catalytic residue [active]"
/db_xref="CDD:48523"
misc_feature complement(355658..355924)
/gene="ahpF"
/locus_tag="BAMEG_0404"
/note="TRX-GRX-like family, Alkyl hydroperoxide reductase
F subunit (AhpF) N-terminal domain (NTD) subfamily,
C-terminal TRX-fold subdomain; AhpF is a homodimeric
flavoenzyme which catalyzes the NADH-dependent reduction
of the peroxiredoxin AhpC, which then...; Region:
AhpF_NTD_C; cd03026"
/db_xref="CDD:48575"
misc_feature complement(order(355844..355846,355853..355855))
/gene="ahpF"
/locus_tag="BAMEG_0404"
/note="catalytic residues [active]"
/db_xref="CDD:48575"
misc_feature complement(354983..355189)
/gene="ahpF"
/locus_tag="BAMEG_0404"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
gene complement(356251..356814)
/gene="ahpC"
/locus_tag="BAMEG_0405"
/db_xref="GeneID:7784029"
CDS complement(356251..356814)
/gene="ahpC"
/locus_tag="BAMEG_0405"
/EC_number="1.11.1.15"
/note="identified by match to protein family HMM PF00578;
match to protein family HMM PF08534; match to protein
family HMM TIGR03137"
/codon_start=1
/transl_table=11
/product="peroxiredoxin"
/protein_id="YP_002813019.1"
/db_xref="GI:227813010"
/db_xref="GeneID:7784029"
/translation="MLLIGTEVKPFKANAYHNGEFIQVTDESLKGKWSVVCFYPADFT
FVCPTELEDLQNQYATLKELGVEVYSVSTDTHFTHKAWHDSSETIGKIEYIMIGDPTR
TITTNFNVLMEEEGLAARGTFIIDPDGVIQSMEINADGIGRDASILVNKIKAAQYVRN
NPGEVCPAKWQEGSATLKPSLDLVGKI"
misc_feature complement(356254..356814)
/gene="ahpC"
/locus_tag="BAMEG_0405"
/note="peroxiredoxin; Region: AhpC; TIGR03137"
/db_xref="CDD:211789"
misc_feature complement(356296..356805)
/gene="ahpC"
/locus_tag="BAMEG_0405"
/note="Peroxiredoxin (PRX) family, Typical 2-Cys PRX
subfamily; PRXs are thiol-specific antioxidant (TSA)
proteins, which confer a protective role in cells through
its peroxidase activity by reducing hydrogen peroxide,
peroxynitrite, and organic hydroperoxides; Region:
PRX_Typ2cys; cd03015"
/db_xref="CDD:48564"
misc_feature complement(order(356308..356319,356365..356367,
356386..356391,356401..356409,356413..356421,
356458..356460,356488..356490,356668..356670,
356677..356682,356803..356805))
/gene="ahpC"
/locus_tag="BAMEG_0405"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48564"
misc_feature complement(order(356473..356475,356509..356511,
356515..356517,356581..356586,356686..356688))
/gene="ahpC"
/locus_tag="BAMEG_0405"
/note="decamer (pentamer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:48564"
misc_feature complement(order(356455..356457,356674..356676,
356683..356685))
/gene="ahpC"
/locus_tag="BAMEG_0405"
/note="catalytic triad [active]"
/db_xref="CDD:48564"
misc_feature complement(order(356317..356319,356674..356676))
/gene="ahpC"
/locus_tag="BAMEG_0405"
/note="peroxidatic and resolving cysteines [active]"
/db_xref="CDD:48564"
gene 357405..358634
/locus_tag="BAMEG_0406"
/db_xref="GeneID:7785789"
CDS 357405..358634
/locus_tag="BAMEG_0406"
/note="related protein from Bacillus subtilis functions as
methylribose kinase and functions in salvage pathway"
/codon_start=1
/transl_table=11
/product="5-methylribose kinase"
/protein_id="YP_002813020.1"
/db_xref="GI:227813011"
/db_xref="GeneID:7785789"
/translation="MSKFTKYFLMEANDVIVYVKEKLCKFEHAKGLQCKEIGDGNLNY
VFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL
FDSVMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNHKEKK
ELVKNYINPELCEITEDLVYAEPFTNHNKRNELFPLNEGWIREHIYSDKELRIEVAKL
KFSFMTNAQALIHGDLHTGSVFVKNDSTKVIDPEFAFYGPMGYDIGNVMANLMFAWVN
ADATMSAGAKKDTYMDWLQSTMVEVIDLFKKKFLDAWNIHVTEIMAKEEGFNEIYLQS
VLEDTAAVTGLELIRRIVGLAKVKDITCIENEEARARAERICLQVAKKFILRANQYKT
GTSFVETLKEQSMHYAK"
misc_feature 357405..358631
/locus_tag="BAMEG_0406"
/note="5-methylribose kinase; Reviewed; Region: PRK12396"
/db_xref="CDD:183499"
misc_feature 357504..358289
/locus_tag="BAMEG_0406"
/note="Phosphotransferase enzyme family; Region: APH;
pfam01636"
/db_xref="CDD:201896"
gene 358644..359690
/gene="mtnA"
/locus_tag="BAMEG_0407"
/db_xref="GeneID:7783326"
CDS 358644..359690
/gene="mtnA"
/locus_tag="BAMEG_0407"
/EC_number="5.3.1.23"
/note="isomerizes methylthioribose-1-phosphate into
methylthioribulose-1-phosphate; involved in methionine
salvage pathway"
/codon_start=1
/transl_table=11
/product="methylthioribose-1-phosphate isomerase"
/protein_id="YP_002813021.1"
/db_xref="GI:227813012"
/db_xref="GeneID:7783326"
/translation="MMEEQLIPIQWKDDALVLLDQTLLPNEVVYESFNTAEGVWDAIQ
VMKVRGAPAIGVSAAYGVYLGVKEFVESTEAEFIDEVKRVCAYLATSRPTAVNLFWAL
ERMESVATDHTHLSITQLKDRLLEEAKEIHREDEEINRQIGEHALTLFHDGMGVLTHC
NAGALATTKYGTATAPMYLAKEKGWDLKIYSDETRPRLQGSTLTALELQRAGIDVTVI
TDNMAAMVMSQGKIDAVIVGCDRVAANGDVANKIGTLGVSILAKYYNIPFYVAAPTPT
IDLKTPTGKEIPIEERDASEVINRFGQYSAPKESKVYNPAFDVTPHENVTAIITEKGI
VKAPFTENLKKLFQ"
misc_feature 358653..359684
/gene="mtnA"
/locus_tag="BAMEG_0407"
/note="methylthioribose-1-phosphate isomerase; Reviewed;
Region: mtnA; PRK05720"
/db_xref="CDD:180221"
misc_feature 358665..359654
/gene="mtnA"
/locus_tag="BAMEG_0407"
/note="S-methyl-5-thioribose-1-phosphate isomerase;
Region: salvage_mtnA; TIGR00512"
/db_xref="CDD:161908"
gene 359745..360386
/locus_tag="BAMEG_0408"
/db_xref="GeneID:7782139"
CDS 359745..360386
/locus_tag="BAMEG_0408"
/note="catalyzes the formation of glycerone phosphate and
(S)-lactaldehyde from L-fuculose 1-phosphate"
/codon_start=1
/transl_table=11
/product="L-fuculose phosphate aldolase"
/protein_id="YP_002813022.1"
/db_xref="GI:227813013"
/db_xref="GeneID:7782139"
/translation="MLLQKEREEIVAYGKKMISSGLTKGTGGNISIFNREQGLVAISP
SGLDYYETKPEDVVILNLDGEVVEGERKPSSELDMHLIYYRNREDINALVHTHSPYAK
TIASLGWELPAVSYLIAFAGPNVRCAPYETFGTKQLAEAAFEGMIDRRAVLLANHGLI
AGANHIKMAFTVAEEIEFCAQIYYQTKSIGEPKLLPEDEMENLAKKFEGYGQQ"
misc_feature 359745..360383
/locus_tag="BAMEG_0408"
/note="L-fuculose phosphate aldolase; Provisional; Region:
PRK06833"
/db_xref="CDD:180717"
misc_feature order(359778..359780,359790..359792,359814..359816,
359886..359888,359892..359897,360033..360035,
360039..360044,360057..360065,360084..360086,
360090..360095,360132..360134,360210..360212,
360243..360245,360264..360266,360276..360278,
360297..360299,360354..360356)
/locus_tag="BAMEG_0408"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:29521"
misc_feature order(359829..359831,359877..359882,359964..359972,
360027..360029,360033..360035,360213..360215)
/locus_tag="BAMEG_0408"
/note="active site"
/db_xref="CDD:29521"
misc_feature order(360027..360029,360033..360035,360213..360215)
/locus_tag="BAMEG_0408"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:29521"
gene complement(360427..361434)
/locus_tag="BAMEG_0409"
/db_xref="GeneID:7786944"
CDS complement(360427..361434)
/locus_tag="BAMEG_0409"
/note="identified by match to protein family HMM PF01032"
/codon_start=1
/transl_table=11
/product="iron compound ABC transporter permease"
/protein_id="YP_002813023.1"
/db_xref="GI:227813014"
/db_xref="GeneID:7786944"
/translation="MIPSILRKQRLIILALLILTITTIVIGMGLGSASLSYDRLLPIL
MGQGTFKEEFVLYSLRLPRIIITLLAGMALALSGAILQGITRNDLAEPGILGINSGAG
VAVAIFFLYFPIDVGSFLYLLPVVGFIGAFLTAVLIYVFSYSKSSGLQPVRLTLTGIG
FAFALSGMMIVLISSADRMKVDFISKWIAGNIWGDDWIFIFAMLPWLIVLIPFVFYKA
NRLNILALNEPVAIGVGIEIEKERRYLLVAAVALAAAAVSVTGGISFIGLMAPHIAKS
LVGPRHQIFMPIALLIGGWLLLLADTIGRNIVEPNGIPAGIVVALIGAPYFMYLLLKK
A"
misc_feature complement(360436..>361269)
/locus_tag="BAMEG_0409"
/note="iron-hydroxamate transporter permease subunit;
Provisional; Region: PRK10577"
/db_xref="CDD:182563"
misc_feature complement(360442..361191)
/locus_tag="BAMEG_0409"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cd06550"
/db_xref="CDD:119348"
misc_feature complement(order(360589..360591,360610..360612,
360733..360741,360745..360762,360766..360771,
360775..360783,360787..360792,361171..361179,
361189..361191))
/locus_tag="BAMEG_0409"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
misc_feature complement(order(360442..360444,360451..360456,
360463..360465,360472..360477,360484..360486,
360640..360642,360868..360870,360877..360882,
360916..360918,360922..360927,360934..360936,
360943..360948,360955..360960,360967..360972,
360976..360978,361153..361155,361168..361170,
361174..361176))
/locus_tag="BAMEG_0409"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature complement(order(360493..360495,360520..360522,
360652..360654,360664..360666,360838..360840,
360916..360918))
/locus_tag="BAMEG_0409"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
gene complement(361431..362471)
/locus_tag="BAMEG_0410"
/db_xref="GeneID:7786189"
CDS complement(361431..362471)
/locus_tag="BAMEG_0410"
/note="identified by match to protein family HMM PF01032"
/codon_start=1
/transl_table=11
/product="iron compound ABC transporter permease"
/protein_id="YP_002813024.1"
/db_xref="GI:227813015"
/db_xref="GeneID:7786189"
/translation="MKRKDVKRMTKEHDNTRSIAFTYKLILSIIAFFLIFMVAMVLGA
ADTSIKDVWLALTSSAKGDKISIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLA
EPGLLGLSGGANAALALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIGMVKKGGLSP
LRIVLAGAAVSAFLLAISEGVGIYFKISQDVSLWTAGGVIGTTWSQLKVIIPVISISI
FIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGASVALVGNMAFIGLM
VPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFF
LFIVRKGGKTFS"
misc_feature complement(361440..>362288)
/locus_tag="BAMEG_0410"
/note="iron-hydroxamate transporter permease subunit;
Provisional; Region: PRK10577"
/db_xref="CDD:182563"
misc_feature complement(361458..362243)
/locus_tag="BAMEG_0410"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cd06550"
/db_xref="CDD:119348"
misc_feature complement(order(361605..361607,361626..361628,
361749..361757,361761..361778,361782..361787,
361791..361799,361803..361808,362172..362180,
362190..362192))
/locus_tag="BAMEG_0410"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
misc_feature complement(order(361458..361460,361467..361472,
361479..361481,361488..361493,361500..361502,
361656..361658,361884..361886,361893..361898,
361926..361928,361932..361937,361944..361946,
361953..361958,361965..361970,361977..361982,
361986..361988,362154..362156,362169..362171,
362175..362177))
/locus_tag="BAMEG_0410"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature complement(order(361509..361511,361536..361538,
361668..361670,361680..361682,361854..361856,
361926..361928))
/locus_tag="BAMEG_0410"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
gene complement(362520..363437)
/locus_tag="BAMEG_0411"
/db_xref="GeneID:7784052"
CDS complement(362520..363437)
/locus_tag="BAMEG_0411"
/note="identified by match to protein family HMM PF01497"
/codon_start=1
/transl_table=11
/product="iron compound ABC transporter substrate-binding
protein"
/protein_id="YP_002813025.1"
/db_xref="GI:227813016"
/db_xref="GeneID:7784052"
/translation="MKKLFISLTVLFVLVMSACSNGSTDKKNDAKGSKSETITYQSEN
GKVEVPANPKRVVVLSSFAGNVMSLGVNLVGVDSWSKQNPRFDSKLKDVAEVSDENVE
KIAELNPDLIIGLSNIKNVDKLKKIAPTVTYTYGKVDYLTQHLEIGKLLNKEKEAKTW
VDDFKKRAQDAGKEIKAKIGEDATVSVVENFNKQLYVYGENWGRGTEILYQEMKLKMP
EKVKEKALKEGYYALSTEVLPEFAGDYLIVSKNKDTDNSFQETESYKNIPAVKNNRVY
EANMMEFYFNDPLTLDFQLDFFKKSFLGK"
misc_feature complement(362523..363434)
/locus_tag="BAMEG_0411"
/note="ABC-type Fe3+-hydroxamate transport system,
periplasmic component [Inorganic ion transport and
metabolism]; Region: FepB; COG0614"
/db_xref="CDD:30959"
misc_feature complement(362574..363305)
/locus_tag="BAMEG_0411"
/note="Periplasmic binding protein FeuA. These proteins
have predicted to function as initial receptors in ABC
transport of metal ions in some eubacterial species. They
belong to the TroA superfamily of periplasmic metal
binding proteins that share a distinct...; Region: FeuA;
cd01138"
/db_xref="CDD:29741"
misc_feature complement(order(362748..362750,362850..362852,
363087..363089,363093..363095,363150..363152,
363201..363203,363252..363257))
/locus_tag="BAMEG_0411"
/note="putative ligand binding residues [chemical
binding]; other site"
/db_xref="CDD:29741"
gene 363770..364819
/locus_tag="BAMEG_0412"
/db_xref="GeneID:7782441"
CDS 363770..364819
/locus_tag="BAMEG_0412"
/note="identified by match to protein family HMM PF00070;
match to protein family HMM PF01134; match to protein
family HMM PF03486; match to protein family HMM PF07992"
/codon_start=1
/transl_table=11
/product="pyridine nucleotide-disulfide oxidoreductase
family protein"
/protein_id="YP_002813026.1"
/db_xref="GI:227813017"
/db_xref="GeneID:7782441"
/translation="MNREELFDVTVIGGGPAGLYSAFYSGLREMKTKIIEFQPQLGGK
IHVYPEKMIWDIGGLLPVTGEKLIEQLVQQGLTFQPEVVLNTKIESIIRNKDGIFTLK
TSTGEEHFSKTVIVATGSGILNPQKLSIEGAERFEVSNLNYTVKSLKRFKNKTVIISG
GGNSAIDWANELEPIAKKVYLTYRKEELSGHEAQVKQLMNSSAECFFNTSITTLIAGD
NHEAIEYVELTNHETGEVSQLAIDEVIINHGYERDITLLENSELDVAIIDNYYIAGNA
NSESSVDGLYAAGDILKHEGKLHLIAGAFQDAGNAVNKAKQFIQPDASEYGMVSSHNE
VFKKRNRELIKQMMK"
misc_feature 363779..364738
/locus_tag="BAMEG_0412"
/note="Thioredoxin reductase [Posttranslational
modification, protein turnover, chaperones]; Region: TrxB;
COG0492"
/db_xref="CDD:30838"
misc_feature 363800..363991
/locus_tag="BAMEG_0412"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:214164"
gene complement(365016..365384)
/locus_tag="BAMEG_0413"
/db_xref="GeneID:7787549"
CDS complement(365016..365384)
/locus_tag="BAMEG_0413"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813027.1"
/db_xref="GI:227813018"
/db_xref="GeneID:7787549"
/translation="MATRHIITMLEKTLQVETENTISHLTTSLSDRILSQSAAIQENN
CYHTIGEWYKNHFLFQQDDFLWAKYVFYDAYCEEIKKQGHLTKRVRQILESLARMHGK
QYIASILNMPFPKKRAKGTA"
gene 365566..365805
/locus_tag="BAMEG_0414"
/db_xref="GeneID:7783475"
CDS 365566..365805
/locus_tag="BAMEG_0414"
/note="identified by match to protein family HMM
TIGR01764"
/codon_start=1
/transl_table=11
/product="excisionase family DNA binding domain"
/protein_id="YP_002813028.1"
/db_xref="GI:227813019"
/db_xref="GeneID:7783475"
/translation="MNALYITVEEAAEYLNLPKSYIEELIQQKKIRALFDGEQYLLNK
EQFNTHLEQMEKYKQLVEEILNEPIPEDMDVKDED"
misc_feature 365578..365724
/locus_tag="BAMEG_0414"
/note="DNA binding domain, excisionase family; Region:
excise; TIGR01764"
/db_xref="CDD:200128"
gene 366041..366562
/locus_tag="BAMEG_0415"
/db_xref="GeneID:7784187"
CDS 366041..366562
/locus_tag="BAMEG_0415"
/codon_start=1
/transl_table=11
/product="spore coat protein B"
/protein_id="YP_002813029.1"
/db_xref="GI:227813020"
/db_xref="GeneID:7784187"
/translation="MSLFHCDFLKDLIGSFVRVNRGGPESQRGTIISVCPDYFVLQNE
KGELYYYQLSHLKSITKSAKECGSSDCEWEDCACAEDFEALLESFKYRWVKINRGGPE
KVEGILQDVSCDFVTLIVKEEIILIAIKHIKSVNYNALACGESDESDDSSSKESSNNS
GRARAQRQSSRGR"
gene 366583..367032
/locus_tag="BAMEG_0416"
/db_xref="GeneID:7784849"
CDS 366583..367032
/locus_tag="BAMEG_0416"
/codon_start=1
/transl_table=11
/product="putative spore coat protein B"
/protein_id="YP_002813030.1"
/db_xref="GI:227813021"
/db_xref="GeneID:7784849"
/translation="MENVLCCDQIKCLVGETVKVNLRGPESRVGELVSLGKDYLTLQL
PHGELVYYQLKHVKSLVKKVKESKCGDCYSSCFCSDEDTFLDILKDLKYKWVKINRGG
PECMDGLLSEVHHGCITLVNCDEVIYVINSHIKSVSQVVKCKKNEDE"
gene 367195..367863
/locus_tag="BAMEG_0417"
/db_xref="GeneID:7787235"
CDS 367195..367863
/locus_tag="BAMEG_0417"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813031.1"
/db_xref="GI:227813022"
/db_xref="GeneID:7787235"
/translation="MNELNKSIGENIYVKLIGEKRFKGVLIDVGNDIVVLYNGQDYVY
ISLYHVQYYKILRTYDEEISKPDVDSVIKRESPSISLRKVLSTSKGIFTEIYVAGNAP
IHGYVTSIMNDYIVFYSPVYKTVYISLKHLKWLIPYKENQVPYALNKNELPVNPLNIT
LARTFEEQLIKMSGKIMVFDLGEESNKIGKMAKIDEGHIEILKARDAKMYVNIQHVKS
VHCP"
misc_feature 367210..>367302
/locus_tag="BAMEG_0417"
/note="Sm and related proteins; Region: Sm_like; cl00259"
/db_xref="CDD:214036"
misc_feature order(367228..367242,367252..367284,367291..367302)
/locus_tag="BAMEG_0417"
/note="Sm1 motif; other site"
/db_xref="CDD:212462"
misc_feature 367288..367293
/locus_tag="BAMEG_0417"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:212462"
gene 368100..369365
/locus_tag="BAMEG_0418"
/db_xref="GeneID:7786551"
CDS 368100..369365
/locus_tag="BAMEG_0418"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813032.1"
/db_xref="GI:227813023"
/db_xref="GeneID:7786551"
/translation="MEQFPNSLSITLLGSAGGAAKAVLAILNQAIVNEKDPIYEVIKS
VTFHLVDIKQKDRTYYDELFPNLKDQLFLSEIDLQDVVTFKKHLKESSTSVVIDVSGA
DTIRVLSCCNELGICYINSALENEAVDQDDSLIGFQLTERYTRFEKEKEKFTNTKAII
GSGMNPGVVQWMVVELMKERPNEKPRACYIVEHDTSFLNDTALIKPHTLYASWAVERF
LDEAIWSYPMYMSHHRPLYFYEDVYASEYKVKLGEKEFYGCLMPHEEVLILGKNFNME
VGFLYRINEYTTNIIRQNLNKVEDLWNWNRKVFNPAEEEIAGEDLVGVLLVYENSEAY
MYNVMNSSQVFHKYKTNATYFQVGCGIYAGLCSLLFDEFKQGAYYVEELLLNTESKYG
EYLNLYMKDFVVGENDFTDGLLHDRVRWI"
misc_feature 368322..>368762
/locus_tag="BAMEG_0418"
/note="Saccharopine dehydrogenase; Region: Saccharop_dh;
pfam03435"
/db_xref="CDD:202629"
gene 369487..369603
/locus_tag="BAMEG_0419"
/db_xref="GeneID:7782816"
CDS 369487..369603
/locus_tag="BAMEG_0419"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_002813033.1"
/db_xref="GI:227813024"
/db_xref="GeneID:7782816"
/translation="MRSIYMNKFKSLIYEEREALKVFKKINGFVRETKANKL"
gene 369647..369763
/locus_tag="BAMEG_0420"
/db_xref="GeneID:7783070"
CDS 369647..369763
/locus_tag="BAMEG_0420"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain
one or more premature stops and/or frameshifts"
/codon_start=1
/transl_table=11
/product="sporulation kinase"
/protein_id="YP_002813034.1"
/db_xref="GI:227813025"
/db_xref="GeneID:7783070"
/translation="MESYAAQYRVKFHWKINGDASPVNGDDKQLKQLLLKMG"
gene 369825..370019
/locus_tag="BAMEG_0421"
/db_xref="GeneID:7784937"
CDS 369825..370019
/locus_tag="BAMEG_0421"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain
one or more premature stops and/or frameshifts"
/codon_start=1
/transl_table=11
/product="sensor histidine kinase domain protein"
/protein_id="YP_002813035.1"
/db_xref="GI:227813026"
/db_xref="GeneID:7784937"
/translation="MHLYIGMENEKLDKIGKAFYSTKQNGTGLRLAITYKIIEEYQGN
VAIQSSVEIGTKVEIFLMIV"
misc_feature <369837..370007
/locus_tag="BAMEG_0421"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(369840..369845,369906..369917,369963..369965,
369969..369971,369984..369989,369993..369995)
/locus_tag="BAMEG_0421"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature order(369840..369842,369906..369908,369912..369914)
/locus_tag="BAMEG_0421"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 370243..370623
/locus_tag="BAMEG_0422"
/db_xref="GeneID:7787380"
CDS 370243..370623
/locus_tag="BAMEG_0422"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813036.1"
/db_xref="GI:227813027"
/db_xref="GeneID:7787380"
/translation="MELTLNSTVCLHTIQFRKEQKNYIVKDTITGEKYEMPPLWIDAL
AMMRDGFLLGEIEEKLKEEYPAEEINMLAFTRQLLELELVEMVDGEEIACTKKKEKDY
LAWVRPRVEQFFLSLNKKYRSKGQ"
gene complement(370652..371284)
/locus_tag="BAMEG_0423"
/db_xref="GeneID:7782182"
CDS complement(370652..371284)
/locus_tag="BAMEG_0423"
/note="identified by match to protein family HMM PF04199"
/codon_start=1
/transl_table=11
/product="putative cyclase"
/protein_id="YP_002813037.1"
/db_xref="GI:227813028"
/db_xref="GeneID:7782182"
/translation="MKVIDLSQTFENNMSQFPGTPKINLEAITSVEETGYQVTDFHSV
VHVGTHCDAPAHFISGATTIDQLPLDQFVGEAVLIDVTHVQERKLRKEVLHNADIKEG
DIVIFHSNLSTKWNTEAYEQEAFYLSEELAEELVQLKVKSVGLDFISPDEVTTETSPI
HHILLGNNIYLIENLTNLDAIKTKRFFFSAAPLKIKDSDGAFARAFAVIF"
misc_feature complement(370658..371284)
/locus_tag="BAMEG_0423"
/note="Kynurenine formamidase [Amino acid transport and
metabolism]; Region: COG1878"
/db_xref="CDD:32062"
misc_binding complement(371371..371483)
/note="SAM riboswitch (S box leader)"
/bound_moiety="S-adenosyl methionine"
gene 371633..372742
/locus_tag="BAMEG_0425"
/db_xref="GeneID:7785145"
CDS 371633..372742
/locus_tag="BAMEG_0425"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813038.1"
/db_xref="GI:227813029"
/db_xref="GeneID:7785145"
/translation="MTGNVLNYFAGGNTARGFHNLYEENLKGLNRLFILKGGPGTGKS
SLIKAIGRDWVEKGYDIEFLHCSSDNKSVDGVIIPKLKVGIVDGTSPHVIEPKMPGVV
EEYINLGGAWDSDKLREQKVEIERFVSEASKAFQAAYARFNEALIIHDEWEKIYIDNI
DFNKANELTDQLIQKLFADKGGKQSLVKHRFLGAATPKGAVDFVPNLTEGLLHRYFIK
GRPGSGKSTMLKKLAKAAEEKGFEVEVYHCGFDPNSLDMVIVRELGFAIFDSTAPHEY
FPSREGDEIIDMYALIVTPGTDEKYAEEIRHVSIQYKTKMNEAMSFLAKAKSVRDKLE
RIYIAAMDFSKVDAYKEEIQKEFERIAISVTEKNK"
misc_feature 371633..372724
/locus_tag="BAMEG_0425"
/note="hypothetical protein; Provisional; Region:
PRK06851"
/db_xref="CDD:180730"
misc_feature 371729..>371914
/locus_tag="BAMEG_0425"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
misc_feature 371741..371764
/locus_tag="BAMEG_0425"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature 371744..371767
/locus_tag="BAMEG_0425"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 372257..372739
/locus_tag="BAMEG_0425"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
gene 372865..373647
/locus_tag="BAMEG_0426"
/db_xref="GeneID:7781896"
CDS 372865..373647
/locus_tag="BAMEG_0426"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813039.1"
/db_xref="GI:227813030"
/db_xref="GeneID:7781896"
/translation="MREKIKLELERIEKEKDVKILFAVESGSRAWGFPSKDSDYDVRF
VYMHPVEWYLSIHDKRDVIEYPISDDLDISGWDIKKALQLFAKSNPALLEWIRSPIFY
SKNSNFPEQLQQMSEKNFDPKATIYHYLHMASKNYREFLQGENVKLKKYFYVLRPILA
CKWLEEKTTLPPVEFDRLITELLLERSVLDEIEQLLIKKKAGTELDVGLKIEVLNQFL
EEQIHYYQQYVKGIEKGSGIDIESLNTLFRDMLFEVYKKEHE"
misc_feature 372913..373611
/locus_tag="BAMEG_0426"
/note="Predicted nucleotidyltransferase; Region:
Nuc-transf; pfam10127"
/db_xref="CDD:150764"
gene complement(373662..374963)
/locus_tag="BAMEG_0427"
/db_xref="GeneID:7786916"
CDS complement(373662..374963)
/locus_tag="BAMEG_0427"
/note="identified by match to protein family HMM PF00083;
match to protein family HMM PF07690"
/codon_start=1
/transl_table=11
/product="putative benzoate transport protein"
/protein_id="YP_002813040.1"
/db_xref="GI:227813031"
/db_xref="GeneID:7786916"
/translation="MQPSAPPHLESTKTIFSNSITKLVVFICWLAILADGYDLGIYGA
VLPKLLEDNSWALSPAHAGTIASYALFGMFIGAILVGTITDLIGRKWTLICCLALFSI
TMGLAALAPSPELFGLWRFIGGIGLGGVIPTASALTVEYSPKKRQSFIYALMFTGYPL
GIVLGAILSMFMLEDFGWRIMFGIGMIPLLLIPFIIRYLPESIQFLLSRNRQEEVDKI
LNRFQIEFYAKDETHQAPSNIRKKNGFLTLFSKEYIKATLLFWITYIMGMFLIYGLNT
WLPQMMRQAGYPLGSSLSFLLMLNITAAIGALFAGAIADRIGAKIVISISYLMAAICI
GLLTIKPSVSIIYLLIGLAGIGSVGITQILNAYVTQYFPSHIRATSLGWGLGLGRVGA
IAGPILVGIIMTMQYDLAWNFYLFSFAGLLAAISVFFIPTK"
misc_feature complement(373755..374915)
/locus_tag="BAMEG_0427"
/note="benzoate transport; Region: 2A0115; TIGR00895"
/db_xref="CDD:213568"
misc_feature complement(<374364..374891)
/locus_tag="BAMEG_0427"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(374478..374480,374496..374501,
374508..374513,374547..374549,374556..374561,
374568..374573,374580..374585,374721..374726,
374730..374735,374745..374747,374754..374759,
374766..374768,374823..374828,374832..374840,
374847..374849))
/locus_tag="BAMEG_0427"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature complement(373671..>374207)
/locus_tag="BAMEG_0427"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(375107..376633)
/locus_tag="BAMEG_0428"
/db_xref="GeneID:7782106"
CDS complement(375107..376633)
/locus_tag="BAMEG_0428"
/note="identified by match to protein family HMM PF00355;
match to protein family HMM PF01266"
/codon_start=1
/transl_table=11
/product="putative Rieske 2Fe-2S iron-sulfur protein"
/protein_id="YP_002813041.1"
/db_xref="GI:227813032"
/db_xref="GeneID:7782106"
/translation="MTSDTFPQFPSSYWIESTQIPTFPPLSENIKTKVAIIGAGITGI
TTAYLLAKEGIDVVLIDSGLILNGTTGHTTAKITAQHDLIYDELINHFGMEKAGLYYE
ANNHALQFINKTVQTYKIDCNFLNEDSYLYTTTDNGLRTLSKEYEAYQKLNIPCDFVQ
SLSIPIPVQSALVMKNQAQFHPLLYLKTLLEKFVEMGGKVYEQTTAIDVEKGDYPQVI
TKGGHRITCEYVVSCSHFPFYDATSFFFTRMYAERSYALAIKAKTDYPGGMYLSIDDP
KRSLRYTTNNGEKLILIGGESHKTGQGINTMLHYEALYSFAEATFGVDEVPYRWSAQD
LITLDKVPYIGHINESNPNIFVATGYRKWGMTTGTAAAHLLKDSILKVHSPYKELYTP
SRFHANPDIKTFLSQNIDVAKHLIEGKIETALRKPEDLEVGEGSVVHVNGKRAGAYKD
KEGKLHIVDTTCTHLGCEVEWNNGDCTWDCPCHGSRFSIEGDVIEGPADQPLKRVDNE
"
misc_feature complement(375554..376600)
/locus_tag="BAMEG_0428"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:214164"
misc_feature complement(375443..376492)
/locus_tag="BAMEG_0428"
/note="Glycine/D-amino acid oxidases (deaminating) [Amino
acid transport and metabolism]; Region: DadA; COG0665"
/db_xref="CDD:31009"
misc_feature complement(375119..375472)
/locus_tag="BAMEG_0428"
/note="Rieske Fe-S protein [Energy production and
conversion]; Region: QcrA; COG0723"
/db_xref="CDD:31067"
misc_feature complement(375110..375358)
/locus_tag="BAMEG_0428"
/note="YhfW family, C-terminal Rieske domain; YhfW is a
protein of unknown function with an N-terminal DadA-like
(glycine/D-amino acid dehydrogenase) domain and a
C-terminal Rieske domain. The Rieske domain is a [2Fe-2S]
cluster binding domain involved in...; Region:
Rieske_YhfW_C; cd03477"
/db_xref="CDD:58547"
misc_feature complement(order(375179..375181,375185..375187,
375194..375196,375239..375244,375248..375250))
/locus_tag="BAMEG_0428"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:58547"
gene 377216..378301
/locus_tag="BAMEG_0429"
/db_xref="GeneID:7786810"
CDS 377216..378301
/locus_tag="BAMEG_0429"
/note="identified by match to protein family HMM PF00487"
/codon_start=1
/transl_table=11
/product="fatty acid desaturase"
/protein_id="YP_002813042.1"
/db_xref="GI:227813033"
/db_xref="GeneID:7786810"
/translation="MKELHTFGWYAARVSPHLPKKAFKPVPTRLFGGLAYLLVALAGL
ISIGVFELNVWANLGIAIVLGLCFASLGFLGHEILHGTVVRKAWLRDFLGAIAFMPLS
TGPKLWRKWHNATHHVHTQHEENDPDAWPTLEKLKKSKFLSWVYRMPLHVRSFFSFLS
LTIQFTLHSTRMFFHFIKEFKSSNQKSVWLQLLLPWTVWISLLFIMGPGKWLFAYVIP
LLIANFIVMAYIATNHRLNPIVPVNDPLANCLSVTVPRWVDVLHFNFSYHTEHHLFPA
MSSKYYPLVKEKIKEMWPERYHEMPMTKALAALWNTPRVYYQGSELVDPHREHFYGSL
GNGLDPHNISYREEHIEEEESIKKVNQ"
misc_feature 377369..378115
/locus_tag="BAMEG_0429"
/note="Fatty acid desaturase; Region: FA_desaturase;
pfam00487"
/db_xref="CDD:201259"
misc_feature 377387..378106
/locus_tag="BAMEG_0429"
/note="The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like
CD includes the integral-membrane enzymes: delta-4,
delta-5, delta-6, delta-8, delta-8-sphingolipid, and
delta-11 desaturases found in vertebrates, higher plants,
fungi, and bacteria. These desaturases...; Region:
Delta6-FADS-like; cd03506"
/db_xref="CDD:58172"
misc_feature order(377441..377443,377453..377455,377549..377551,
377561..377566,378017..378019,378026..378031)
/locus_tag="BAMEG_0429"
/note="putative di-iron ligands [ion binding]; other site"
/db_xref="CDD:58172"
gene complement(378354..379046)
/locus_tag="BAMEG_0430"
/db_xref="GeneID:7782515"
CDS complement(378354..379046)
/locus_tag="BAMEG_0430"
/note="identified by match to protein family HMM PF00528;
match to protein family HMM TIGR01726"
/codon_start=1
/transl_table=11
/product="amino acid ABC transporter permease"
/protein_id="YP_002813043.1"
/db_xref="GI:227813034"
/db_xref="GeneID:7782515"
/translation="MFEIFMSTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFFRISN
NKVLNSIAHVYIAIIRGTPLIVQIAILYFGITSVVVFTPFWAGAIALAIHNGAYITEI
FRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVA
YVGMAELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKETNSV
QVSAKKKKEVSL"
misc_feature complement(378480..378938)
/locus_tag="BAMEG_0430"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(378480..378482,378489..378494,
378522..378527,378564..378569,378576..378587,
378606..378608,378615..378620,378660..378662,
378711..378713,378720..378725,378735..378737,
378741..378746,378753..378755,378759..378761,
378765..378770,378831..378833,378837..378842,
378849..378878,378882..378893,378921..378923,
378936..378938))
/locus_tag="BAMEG_0430"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(378570..378587,378831..378875))
/locus_tag="BAMEG_0430"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(378492..378494,378522..378524,
378531..378533,378567..378569,378783..378785,
378831..378833))
/locus_tag="BAMEG_0430"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(378639..378641,378651..378656,
378672..378710))
/locus_tag="BAMEG_0430"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(379141..379935)
/locus_tag="BAMEG_0431"
/db_xref="GeneID:7783749"
CDS complement(379141..379935)
/locus_tag="BAMEG_0431"
/note="identified by match to protein family HMM PF00497"
/codon_start=1
/transl_table=11
/product="putative amino acid ABC transporter, amino
acid-binding protein"
/protein_id="YP_002813044.1"
/db_xref="GI:227813035"
/db_xref="GeneID:7783749"
/translation="MKRKLLTIVASITLCTSFILGACSKESATTSSNGKKEFRYAMSG
LYKPFNYKENDGKLVGFDVEIGEALAKKMNMKPTPITNPWETLIQGLKAKKYDVILGS
MAITEERLKAVNFSNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVAK
HTDQITEYDSDITALMDLEPGRIDAVITDQMVGLRMIKEGKSNIKEAGKPLNLDEMGI
AIRKDDKEMVEKVNKALDEIIKDGTYEKISKKWFGRNILGEEENTK"
misc_feature complement(379177..379821)
/locus_tag="BAMEG_0431"
/note="Bacterial extracellular solute-binding proteins,
family 3; Region: SBP_bac_3; pfam00497"
/db_xref="CDD:201266"
misc_feature complement(379180..379815)
/locus_tag="BAMEG_0431"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cd00134"
/db_xref="CDD:29040"
misc_feature complement(order(379369..379371,379477..379479,
379609..379611,379684..379686,379798..379800))
/locus_tag="BAMEG_0431"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29040"
misc_feature complement(order(379390..379392,379408..379410,
379420..379422))
/locus_tag="BAMEG_0431"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:29040"
misc_feature complement(order(379285..379293,379294..379296))
/locus_tag="BAMEG_0431"
/note="hinge residues; other site"
/db_xref="CDD:29040"
gene complement(380057..380779)
/locus_tag="BAMEG_0432"
/db_xref="GeneID:7785871"
CDS complement(380057..380779)
/locus_tag="BAMEG_0432"
/note="identified by match to protein family HMM PF00005"
/codon_start=1
/transl_table=11
/product="amino acid ABC transporter ATP-binding protein"
/protein_id="YP_002813045.1"
/db_xref="GI:227813036"
/db_xref="GeneID:7785871"
/translation="MIQVRNLVKSFGSLDVLKGIDLEVNEKEVVVLIGASGSGKSTLL
RCLNFLEMYDEGEIHLQGERIDPKHSNLNKVRENVGMVFQHFNLFPHMTSLENIIEAP
IHVKKLETANAKEIGNQLLQKVGLQDKADVTPHLLSGGQKQRIAIARALAMNPKIMLF
DEPTSALDPELVGEVLQVMKELAEEGMTMVIVTHEMNFARDVADRVIFMDDGKIVEDA
PPAQFFSTPSHERAKQFLRNVL"
misc_feature complement(380060..380779)
/locus_tag="BAMEG_0432"
/note="ABC-type polar amino acid transport system, ATPase
component [Amino acid transport and metabolism]; Region:
GlnQ; COG1126"
/db_xref="CDD:31323"
misc_feature complement(380138..380776)
/locus_tag="BAMEG_0432"
/note="ATP-binding cassette domain of the histidine and
glutamine transporters; Region: ABC_HisP_GlnQ; cd03262"
/db_xref="CDD:213229"
misc_feature complement(380657..380680)
/locus_tag="BAMEG_0432"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213229"
misc_feature complement(order(380198..380200,380294..380299,
380528..380530,380654..380662,380666..380671))
/locus_tag="BAMEG_0432"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213229"
misc_feature complement(380528..380539)
/locus_tag="BAMEG_0432"
/note="Q-loop/lid; other site"
/db_xref="CDD:213229"
misc_feature complement(380342..380371)
/locus_tag="BAMEG_0432"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213229"
misc_feature complement(380294..380311)
/locus_tag="BAMEG_0432"
/note="Walker B; other site"
/db_xref="CDD:213229"
misc_feature complement(380276..380287)
/locus_tag="BAMEG_0432"
/note="D-loop; other site"
/db_xref="CDD:213229"
misc_feature complement(380192..380212)
/locus_tag="BAMEG_0432"
/note="H-loop/switch region; other site"
/db_xref="CDD:213229"
gene complement(380949..382673)
/locus_tag="BAMEG_0433"
/db_xref="GeneID:7783066"
CDS complement(380949..382673)
/locus_tag="BAMEG_0433"
/note="identified by match to protein family HMM PF00015;
match to protein family HMM PF00672"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis protein"
/protein_id="YP_002813046.1"
/db_xref="GI:227813037"
/db_xref="GeneID:7783066"
/translation="MLKILYLLNVINRLILLIAVPIISILIISVVNYMNLQQMHKQLQ
TVYVDRLQPIKWLGSIESSLYQEFSYVKELIITEDENRRTTILNKLNDTNKETEKLQA
QYENTYITGEEKKLLSQYKEKLENYKKHRAQMLDFIKENKLNQAYSFYLTTVEHNLSA
TVGALKNLSDYNEKLAEGLYNDSEHSYKQVISITIILFITCLVLCILISLFTAKSIIN
PINSLRSIMNTAGKGDLTIAVPKQYHHEFGHMFNSFDQMISNLQQIIKNVIQTSVQVK
SSTNHIVETATVSSSTMDNIANTMKQLSHHINDQSANIKDSSTAMDEIANGVQSIAES
STTISNLAISTSDKANVGTEIIENSISQMTTIHTVMDEIYKVVDQLVIRTQDIDKALQ
TITYISEQTNLLSLNAAIESARAGEHGKGFAVVSEEVRKLAEQSKQAATDITKLNLLV
QNDTKDVVNVMGKGQQEIQEGIHAVQNAKLAFHNIVNHINEVTDQIQDITASAEEMSA
SSEEINSALINISSISQNIVSETNHTSQSSQAQSVSIQDITNMSLQMQKLVDELEKSA
TQFKIKNL"
misc_feature complement(382113..382577)
/locus_tag="BAMEG_0433"
/note="Four helix bundle sensory module for signal
transduction; Region: 4HB_MCP_1; pfam12729"
/db_xref="CDD:193205"
misc_feature complement(381885..382028)
/locus_tag="BAMEG_0433"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(381891..381896,381903..381908,
381912..381917,381924..381929,381933..381938,
381984..381986,381990..381995,382002..382007,
382011..382016,382023..382028))
/locus_tag="BAMEG_0433"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(381657..>381908)
/locus_tag="BAMEG_0433"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature complement(<381174..381791)
/locus_tag="BAMEG_0433"
/note="Methyl-accepting chemotaxis-like domains
(chemotaxis sensory transducer); Region: MA; smart00283"
/db_xref="CDD:197627"
misc_feature complement(381174..381710)
/locus_tag="BAMEG_0433"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature complement(order(381177..381182,381186..381191,
381198..381200,381207..381212,381219..381221,
381228..381233,381240..381245,381249..381254,
381261..381263,381270..381275,381282..381284,
381291..381296,381333..381338,381345..381350,
381354..381359,381366..381371,381378..381380,
381387..381392,381399..381401,381408..381410,
381420..381422,381441..381443,381450..381452,
381462..381464,381471..381476,381483..381485,
381492..381494,381501..381506,381513..381518,
381525..381527,381534..381539,381543..381545,
381555..381560,381564..381569,381576..381578,
381585..381590,381597..381602,381609..381611,
381618..381623,381630..381632,381639..381644,
381648..381653,381660..381662,381669..381674,
381681..381686))
/locus_tag="BAMEG_0433"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature complement(381375..381476)
/locus_tag="BAMEG_0433"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene 382881..384173
/locus_tag="BAMEG_0434"
/db_xref="GeneID:7785199"
CDS 382881..384173
/locus_tag="BAMEG_0434"
/note="identified by match to protein family HMM PF00015;
match to protein family HMM PF00672"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis protein"
/protein_id="YP_002813047.1"
/db_xref="GI:227813038"
/db_xref="GeneID:7785199"
/translation="MEKERKAFSFGLRTQLMLFTTVLALITYSTSIFFIYVIYDYFQS
YVSQTAYNIIVMLLGVVWSGILAYGAAVFLIKPLRKLEEAARKAAEGDIREDVPLPKT
DDEIKSLSVAFNMMLGNLRGMVKNIDTTFSYTYNQVQQIRKQTGEATKQAQGVSETLA
EISSGAEQSAASIQAIVSAVDTTTSIASEVEEKAKQSDELSSEMVQALGHSTRVFTSL
IQGIQTLAKENEDSMQNVQKLEERMKQVEHIVSVVSEIASQTNLLALNASIEAARAGE
HGRGFAVVAEEVRKLADESDHSARNISQLLRNMQEEVQQVAMKMTEQVKIAKEEARRG
EATELILKEMSSSVMEVADATKQISSYMNEQVSHIHQTGAQTKAVAAIAEETSAGSQE
VACVTVQQSKNMVVIDQLLKDLEKQAADLKQTIERFSM"
misc_feature 382923..384125
/locus_tag="BAMEG_0434"
/note="Methyl-accepting chemotaxis protein [Cell motility
and secretion / Signal transduction mechanisms]; Region:
Tar; COG0840"
/db_xref="CDD:31182"
misc_feature 383037..383243
/locus_tag="BAMEG_0434"
/note="HAMP domain; Region: HAMP; pfam00672"
/db_xref="CDD:189662"
misc_feature 383439..384062
/locus_tag="BAMEG_0434"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature order(383445..383450,383457..383462,383469..383471,
383478..383483,383487..383492,383499..383501,
383508..383513,383520..383522,383529..383534,
383541..383546,383553..383555,383562..383567,
383571..383576,383586..383588,383592..383597,
383604..383606,383613..383618,383625..383630,
383637..383639,383646..383648,383655..383660,
383667..383669,383679..383681,383688..383690,
383709..383711,383721..383723,383730..383732,
383739..383744,383751..383753,383760..383765,
383772..383777,383781..383786,383793..383798,
383847..383852,383859..383861,383868..383873,
383880..383882,383889..383891,383922..383924,
383928..383933,383940..383945,383952..383954,
383961..383966,383973..383975,383982..383987,
383991..383996,384003..384008,384012..384017,
384024..384026,384033..384038,384045..384047,
384054..384059)
/locus_tag="BAMEG_0434"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature 383655..383756
/locus_tag="BAMEG_0434"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene 384410..386074
/locus_tag="BAMEG_0435"
/db_xref="GeneID:7787146"
CDS 384410..386074
/locus_tag="BAMEG_0435"
/note="identified by match to protein family HMM PF00128"
/codon_start=1
/transl_table=11
/product="glycosyl hydrolase family protein"
/protein_id="YP_002813048.1"
/db_xref="GI:227813039"
/db_xref="GeneID:7787146"
/translation="MNKTWWKEAVAYQIYPRSFMDSNGDGIGDLQGIIAKLDYLKDLG
IDVIWICPMYKSPNDDNGYDISDYQDIMDEFGTMEDFDALLDEVHKRDMKLIIDLVIN
HTSDEHPWFIESRSSKDNPKRDWYIWHDGKDGAEPNNWESIFNGSAWEYDEVTGQYYL
HLFSRKQPDLNWENKEVREVLYDTVNWWLDKGIDGFRVDAISHIKKEDGFKDMPNPKG
LKYVPSFDKHMNVDGIQPLLEELKENTFSKYDIMTVGEANGVKIEDAELWVGEEQGKF
NMVFQFEHLSLWDAEKKKDLDVVGLKKVLTKWQKGLENKGWNALYIENHDKPRIVSTW
GDDKQYWRESATALGAMYFFMHGTPFIYQGQEIGMTNVQFPNIEDYDDVAIKNLYREK
IAEGVSHQDMMEIIWASCRDNSRTPMHWDDEINAGFTTGTPWFGMNQNYKEINVAKQK
NEENSIFNFYKKMIALKKEHDVLNYGTYDLLLEDDPQIYAYTRTLNDEKIVVISNISK
EEAVYNEDLFALERKRLLLNNYEVAEHEQLTTITLKPYETRVYRIS"
misc_feature 384422..386068
/locus_tag="BAMEG_0435"
/note="alpha,alpha-phosphotrehalase; Region:
trehalose_treC; TIGR02403"
/db_xref="CDD:162843"
misc_feature 384428..385816
/locus_tag="BAMEG_0435"
/note="Alpha amylase catalytic domain found in Sucrose
isomerases, oligo-1,6-glucosidase (also called isomaltase;
sucrase-isomaltase; alpha-limit dextrinase), dextran
glucosidase (also called glucan 1,6-alpha-glucosidase),
and related proteins; Region: AmyAc_SI_OligoGlu_DGase;
cd11333"
/db_xref="CDD:200472"
misc_feature order(384470..384472,384476..384478,384482..384484,
384494..384496)
/locus_tag="BAMEG_0435"
/note="Ca binding site [ion binding]; other site"
/db_xref="CDD:200472"
misc_feature order(384587..384589,384596..384598,384707..384709,
384716..384718,384839..384841,384896..384898,
384908..384910,385004..385006,385175..385177,
385640..385642)
/locus_tag="BAMEG_0435"
/note="active site"
/db_xref="CDD:200472"
misc_feature order(385004..385006,385175..385177,385385..385387)
/locus_tag="BAMEG_0435"
/note="catalytic site [active]"
/db_xref="CDD:200472"
gene 386246..387883
/locus_tag="BAMEG_0436"
/db_xref="GeneID:7784688"
CDS 386246..387883
/locus_tag="BAMEG_0436"
/note="identified by match to protein family HMM PF00367;
match to protein family HMM PF02378; match to protein
family HMM TIGR00826; match to protein family HMM
TIGR02003"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIBC"
/protein_id="YP_002813049.1"
/db_xref="GI:227813040"
/db_xref="GeneID:7784688"
/translation="MKITSFDFWQKFGKALLVVVAVMPAVGLMISIGKLIGMSAGDIN
AVHTIARVMEDIGWAIITNLHILFAVAIGGSWAKDRAGGAFAALLAFVLTNRITGAIF
GVNAEMLADSKAKVSSVLAGDLIVKDYFTSVLGAPALNMGVFVGIITGFLGATLYNKY
YNYNKLPQALAFFNGKRFVPFVVIVWSTVTAIVLSLLWPFIQSGLNEFGRWIAASKDS
APVVAPFVYGTLERLLLPFGLHHMLTIPMNYTELGGTYTMLTGSKIGQVVAGQDPLWL
AWITDLNNLLANGDTKAYNDLLNNVVPARFKAGQVIGSTAALMGIAFAMFRNVDKEKR
AKYKPMFLSAALAVFLTGVTEPIEFMFMFIAPVLYVVYAITTGLAFALADLINLRVHA
FGFIELITRTPMMVNAGLTRDLINFVIVSLVFFGLNFTLFNFLIKKFNLPTPGRAGNY
IDNEDEASEGTGNVQEGSLATKVIDLLGGKENIADVDACMTRLRVTVKDLDVVAPEAQ
WKQNGALGLIVKDKGVQAVYGPKADVLKSDIQDMLGA"
misc_feature 386246..387616
/locus_tag="BAMEG_0436"
/note="Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
transport and metabolism]; Region: PtsG; COG1263"
/db_xref="CDD:31455"
misc_feature 386249..387880
/locus_tag="BAMEG_0436"
/note="PTS system, IIBC component; Region: PTS-II-BC-unk1;
TIGR02003"
/db_xref="CDD:131058"
misc_feature 387650..387874
/locus_tag="BAMEG_0436"
/note="PTS_IIB, PTS system, glucose/sucrose specific IIB
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIB_glc; cd00212"
/db_xref="CDD:29267"
misc_feature 387707..387727
/locus_tag="BAMEG_0436"
/note="active site turn [active]"
/db_xref="CDD:29267"
misc_feature 387710..387712
/locus_tag="BAMEG_0436"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29267"
gene 387888..388679
/locus_tag="BAMEG_0437"
/db_xref="GeneID:7787234"
CDS 387888..388679
/locus_tag="BAMEG_0437"
/note="identified by match to protein family HMM PF03372"
/codon_start=1
/transl_table=11
/product="endonuclease/exonuclease/phosphatase family
protein"
/protein_id="YP_002813050.1"
/db_xref="GI:227813041"
/db_xref="GeneID:7787234"
/translation="MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSI
GAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVK
EDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSCHLGWWNDEEELFKGQVNRLME
RVDSNELSFLMGDFNNNARLQGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDE
NKHNLRIDLILCNRSEKIRSSKVVFNGTNRKIISDHFGVEVQVDI"
misc_feature 387894..388670
/locus_tag="BAMEG_0437"
/note="Streptococcus agalactiae RgfB, part of a putative
two component signal transduction system, and related
proteins; Region: RgfB-like; cd09079"
/db_xref="CDD:197313"
misc_feature order(387906..387908,388002..388004,388305..388307,
388404..388406,388410..388412,388563..388565,
388644..388649)
/locus_tag="BAMEG_0437"
/note="putative catalytic site [active]"
/db_xref="CDD:197313"
misc_feature order(388002..388004,388644..388646)
/locus_tag="BAMEG_0437"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:197313"
misc_feature order(388305..388307,388410..388412,388647..388649)
/locus_tag="BAMEG_0437"
/note="putative phosphate binding site [ion binding];
other site"
/db_xref="CDD:197313"
gene 388698..388853
/locus_tag="BAMEG_0438"
/db_xref="GeneID:7784805"
CDS 388698..388853
/locus_tag="BAMEG_0438"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813051.1"
/db_xref="GI:227813042"
/db_xref="GeneID:7784805"
/translation="MMKSCEDFFEEYKYFQEKILVFFMTFPIYLLLLNVKPIWSFCIH
TLTYFVI"
gene 388985..391810
/locus_tag="BAMEG_0439"
/db_xref="GeneID:7783193"
CDS 388985..391810
/locus_tag="BAMEG_0439"
/note="identified by match to protein family HMM PF01061;
match to protein family HMM TIGR03061; match to protein
family HMM TIGR03062"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813052.1"
/db_xref="GI:227813043"
/db_xref="GeneID:7783193"
/translation="MKQIWRIYKTDLRNVAKHWAAIVIVVGLMILPSLYAWFNIKASW
DPYGNTKEVPIAVSNQDAGSNLRGKDINIGNEIVDSLKKNKNLGWKFVDEKQAIYGVE
RGDYYASITIPKDFSEKIATVLDENPQKPELDYYVNEKVNAIAPKITAKGASGITEEI
SKNFVKTANGEIFKIFNDLGIDLETNLPSIEKVKDLVFKLEAQFPEMNTLMDKALDDA
TRAEDLVKVAQKELPVVESVINDGQEALTNLDKFFANNDQTLQNAPGTIRNHLTAAKN
VMDKANAFTDFLMHPGIDFSGMKGLPEFPARPDLSKLNDEGYKNIARNINQTVNNVLN
SARAGTTYGKSVVNGLQNGQFDPEKAKQDLNAVSENLQGRTDSIAYLINVFTELQKSA
TTDFGQSFFQGRVDRLTKLKSGMENANNGIKDIVNVIGTGQEVKKDVTDVANQKLDAA
NGLIDQAEKDYNETFVADYKKAVSTVDQAKADANEAYDSVKNEYDKFKNGVEDAKANI
SNKGVTDLEWAKVSLNDLNGQLQATNNLIGDAIPVLESTNKVLADVNSGKNLNGGIAK
LNKIQNSVQKGIDATNKATTLINNGQKPTKEVVESINEATQNASAQLGDFLATYDSEI
VPNFNTAIERTKRMSKNTSQILKEADKKLPDVKKLLEDSSKGLVDGRKKLADIKAEMP
ATEKKIKELADKIRDFESEEDLKDIIRLLKNDVEKQSDYFANPVNLKENKLFAMPNYG
SAMSPFYTVLALWVGALLMVSLLTVEVHEEGANYKSHEIYFGRLLTFLTMGLSQAFIV
SMGDIFLLGTYVVDKFWFVLFSLFIGGVFVCIVYSLVSIFGNVGKSMAIILLVLQVAG
SGGTFPIQMTPAFFQAIYPFLPFTYAISAIRETVGGMLWDIVTRDLLVLSAFVVVMIV
AALLLKTPINKSSEKFVENAKGSKIIH"
misc_feature 388997..>390856
/locus_tag="BAMEG_0439"
/note="Predicted membrane protein [Function unknown];
Region: COG1511"
/db_xref="CDD:31700"
misc_feature 389012..389503
/locus_tag="BAMEG_0439"
/note="YhgE/Pip N-terminal domain; Region: pip_yhgE_Nterm;
TIGR03061"
/db_xref="CDD:132105"
misc_feature 391148..391747
/locus_tag="BAMEG_0439"
/note="YhgE/Pip C-terminal domain; Region: pip_yhgE_Cterm;
TIGR03062"
/db_xref="CDD:163121"
misc_feature <391229..391741
/locus_tag="BAMEG_0439"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(391851..394040)
/gene="topB1"
/locus_tag="BAMEG_0440"
/db_xref="GeneID:7782433"
CDS complement(391851..394040)
/gene="topB1"
/locus_tag="BAMEG_0440"
/EC_number="5.99.1.2"
/note="decatenates replicating daughter chromosomes"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase III"
/protein_id="YP_002813053.1"
/db_xref="GI:227813044"
/db_xref="GeneID:7782433"
/translation="MAKSVVIAEKPSVARDIARVLKCDKKGNGYLEGSKYIVTWALGH
LVTLADPESYDVKYKKWNLEDLPMLPERLKLTVIKQTGKQFNAVKSQLLRKDVNEIIV
ATDAGREGELVARWIIDKVRINKPIKRLWISSVTDKAIKDGFANLKPGKAYDNLYASA
VARSEADWYIGLNATRALTTRFNAQLNCGRVQTPTVAMIANREDEIKNFKAQTYYGIE
AQTTNQLKLTWQDANGNSRSFNKEKIDGIVKGLDKHNATVLEIDKKQKKSFSPGLYDL
TELQRDANKKFGYSAKETLNIMQKLYEQHKVLTYPRTDSRYISSDIVGTLPERLKACG
VGEYRPLAHKVLQKPIKANKSFVDDSKVSDHHAIIPTEGYVNFSAFTDKERKIYDLVV
KRFLAVLFPAFEYEQLTLRTKVGNETFIARGKTILHAGWKEVYENRFEDDDVTDDVKE
QLLPRIEKGDTLTVKLIMQTSGQTKAPARFNEATLLSAMENPTKYMDTQNKQLADTLK
STGGLGTVATRADIIDKLFNSFLIEKRGKDIHITSKGRQLLDLVPEELKSPTLTGEWE
QKLEAIAKGKLKKEVFISEMKNYTKEIVSEIKSSDKKYKHDNISTKSCPDCGKPMLEV
NGKKGKMLVCQDRECGHRKNVSRTTNARCPQCKKKLELRGEGAGQIFACKCGYREKLS
TFQERRKKESGNKADKRDVQKYMKQQKKEEEPLNNPFAEALKKLKFD"
misc_feature complement(392064..394034)
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="DNA topoisomerase III; Provisional; Region:
PRK07726"
/db_xref="CDD:181093"
misc_feature complement(393600..394034)
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="TOPRIM_TopoIA_TopoIII: The topoisomerase-primase
(TORPIM) domain found in members of the type IA family of
DNA topoisomerases (Topo IA) similar to topoisomerase III.
Type IA DNA topoisomerases remove (relax) negative
supercoils in the DNA by: cleaving...; Region:
TOPRIM_TopoIA_TopoIII; cd03362"
/db_xref="CDD:173782"
misc_feature complement(order(393714..393716,393720..393722,
393726..393728,394002..394004,394011..394016))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="active site"
/db_xref="CDD:173782"
misc_feature complement(order(393684..393689,393693..393698,
393717..393719,393723..393725,393993..393995))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="putative interdomain interaction site [polypeptide
binding]; other site"
/db_xref="CDD:173782"
misc_feature complement(order(393720..393722,393726..393728))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173782"
misc_feature complement(393717..393719)
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="putative nucleotide binding site [chemical
binding]; other site"
/db_xref="CDD:173782"
misc_feature complement(392259..393578)
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="DNA Topoisomerase, subtype IA; DNA-binding,
ATP-binding and catalytic domain of bacterial DNA
topoisomerases I and III, and eukaryotic DNA topoisomerase
III and eubacterial and archael reverse gyrases.
Topoisomerases clevage single or double stranded DNA...;
Region: TOP1Ac; cd00186"
/db_xref="CDD:73184"
misc_feature complement(order(393423..393485,393498..393578))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="domain I; other site"
/db_xref="CDD:73184"
misc_feature complement(order(392454..392459,392469..392471,
392475..392480,392487..392492,393105..393107,
393132..393134,393144..393146,393516..393518,
393528..393530,393540..393542,393549..393554))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="DNA binding groove [nucleotide binding]"
/db_xref="CDD:73184"
misc_feature complement(order(392382..392384,393438..393440,
393450..393452))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="phosphate binding site [ion binding]; other site"
/db_xref="CDD:73184"
misc_feature complement(order(392616..392648,392736..392792,
392796..392840,393234..393275,393384..393410))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="domain II; other site"
/db_xref="CDD:73184"
misc_feature complement(order(392841..392903,392928..392951,
393039..393116,393120..393209,393213..393233))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="domain III; other site"
/db_xref="CDD:73184"
misc_feature complement(order(392424..392426,392490..392492,
392496..392498,392862..392864,392874..392876,
392883..392885,392946..392948,393180..393188,
393198..393200))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:73184"
misc_feature complement(order(392946..392948,393105..393107,
393111..393113))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="catalytic site [active]"
/db_xref="CDD:73184"
misc_feature complement(order(392259..392375,392382..392426,
392436..392507,392565..392615))
/gene="topB1"
/locus_tag="BAMEG_0440"
/note="domain IV; other site"
/db_xref="CDD:73184"
misc_binding 394267..394376
/note="TPP riboswitch (THI element)"
/bound_moiety="thiamin/thiamin pyrophosphate"
gene 394449..395255
/gene="thiM"
/locus_tag="BAMEG_0442"
/db_xref="GeneID:7783127"
CDS 394449..395255
/gene="thiM"
/locus_tag="BAMEG_0442"
/EC_number="2.7.1.50"
/note="catalyzes the formation of
4-methyl-5-(2-phosphoethyl)-thiazole and ADP from
4-methyl-5-(2-hydroxyethyl)-thiazole and ATP"
/codon_start=1
/transl_table=11
/product="hydroxyethylthiazole kinase"
/protein_id="YP_002813054.1"
/db_xref="GI:227813045"
/db_xref="GeneID:7783127"
/translation="MNTKEISKVVDLVRESNPLVHNITNVVVTNFTANGLLALGASPV
MAYAKEEVAEMASIAGALVLNMGTLRPDEVEAMLLAGKSANRNDVPVLFDPVGAGATS
YRTEVARHIPAEIELAIIRGNAAEIANVINEKWEIKGVDAGAGNGNVVSIAKQAADEL
NTVAVITGKEDVVTDGERTIVIRNGHSILTKITGTGCLLTSVIGAFVAVEKDYVKAAV
AALTFYGVAAELAAAKTVEKGPGSFQIEFLNQLANTTSGDIEKYGKIEVI"
misc_feature 394485..395204
/gene="thiM"
/locus_tag="BAMEG_0442"
/note="4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase
catalyzes the phosphorylation of the hydroxylgroup of Thz.
A reaction that allows cells to recycle Thz into the
thiamine biosynthesis pathway, as an alternative to its
synthesis from cysteine, tyrosine...; Region: THZ_kinase;
cd01170"
/db_xref="CDD:29354"
misc_feature order(394521..394523,394527..394529,394545..394547,
394557..394559,394575..394577,394581..394583,
394641..394643,394647..394652)
/gene="thiM"
/locus_tag="BAMEG_0442"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29354"
misc_feature order(394524..394541,394545..394550,394557..394559,
394581..394592,394596..394601,394608..394613,
394647..394658,394755..394760,395016..395027,
395169..395174,395178..395186,395190..395195,
395202..395204)
/gene="thiM"
/locus_tag="BAMEG_0442"
/note="multimerization interface [polypeptide binding];
other site"
/db_xref="CDD:29354"
misc_feature order(394728..394730,394809..394811,394815..394817,
394824..394826,394947..394949,394953..394955,
394959..394961,395013..395015,395031..395033,
395037..395039)
/gene="thiM"
/locus_tag="BAMEG_0442"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29354"
gene 395272..395931
/gene="thiE"
/locus_tag="BAMEG_0443"
/db_xref="GeneID:7783918"
CDS 395272..395931
/gene="thiE"
/locus_tag="BAMEG_0443"
/EC_number="2.5.1.3"
/note="Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole
monophosphate and 4-amino-5-hydroxymethyl pyrimidine
pyrophosphate to form thiamine monophosphate"
/codon_start=1
/transl_table=11
/product="thiamine-phosphate pyrophosphorylase"
/protein_id="YP_002813055.1"
/db_xref="GI:227813046"
/db_xref="GeneID:7783918"
/translation="MSRISKAEMSKLLSVYFIMGSNNCTKDPLQVLREALEGFITIFQ
FREKGEGALTGEERICFAKELQAICKEYGVPFIVNDDVELALELDADGVHVGQDDEGI
TSVREKMGDKIVGVSTHTIEEARWVIENGADYLGVGPIFPTSTKKDTKAVQGTKGLAH
FREQGITIPIVGIGGISIENTASVIEAGADGVSVISAISLAESAYESTKKLVEEVSRS
L"
misc_feature 395314..395910
/gene="thiE"
/locus_tag="BAMEG_0443"
/note="Thiamine monophosphate synthase (TMP
synthase)/TenI. TMP synthase catalyzes an important step
in the thiamine biosynthesis pathway, the substitution of
the pyrophosphate of 2-methyl-4-amino-5-
hydroxymethylpyrimidine pyrophosphate by 4-methyl-5-;
Region: TMP_TenI; cd00564"
/db_xref="CDD:73367"
misc_feature order(395317..395319,395323..395325,395401..395403,
395407..395409,395551..395553,395620..395622,
395671..395673,395677..395679,395698..395700,
395704..395706,395782..395784,395794..395796,
395848..395859)
/gene="thiE"
/locus_tag="BAMEG_0443"
/note="thiamine phosphate binding site [chemical binding];
other site"
/db_xref="CDD:73367"
misc_feature order(395401..395403,395407..395409,395413..395415,
395506..395511,395566..395568,395620..395622,
395698..395700,395704..395709,395794..395796,
395854..395859)
/gene="thiE"
/locus_tag="BAMEG_0443"
/note="active site"
/db_xref="CDD:73367"
misc_feature order(395407..395409,395413..395415,395506..395511,
395557..395559,395566..395568,395620..395622,
395707..395709)
/gene="thiE"
/locus_tag="BAMEG_0443"
/note="pyrophosphate binding site [ion binding]; other
site"
/db_xref="CDD:73367"
gene complement(396047..397360)
/locus_tag="BAMEG_0444"
/db_xref="GeneID:7784680"
CDS complement(396047..397360)
/locus_tag="BAMEG_0444"
/note="functions in anaerobic transport of
C4-dicarboxylate compounds such as fumarate; similar to
dcuB"
/codon_start=1
/transl_table=11
/product="anaerobic C4-dicarboxylate transporter"
/protein_id="YP_002813056.1"
/db_xref="GI:227813047"
/db_xref="GeneID:7784680"
/translation="MFWLQFLTLLLCIFIGARLGGVGLGVMGGVGMAILVFVFHLQPT
APPIDVMLMILAVITAAGALQAAGGMDYLVHLAEKALRKNPKRITFFAPIVTYLFTLC
AGTGHVAYSVLPVIAEVSRESGIRPERPMSIAVIASQQAITASPISAATVALLAMLAD
YKITLLDILKVSIPSTFIACMIAAFVASKMGKELNEDPEYLKRLKEGMIPKIEEKKEF
VGVKGAKLSVILFLVGTFLVVLLGSFEALRPGWIVDGKLARLSMPNTIEMVMLTIAAL
IIIFCKPNVESIVSGNVFKAGATAVVAIFGIAWMGDTFFNGNLNMIQGSIQHLVTSAP
WLFAIALFILSILLYSQAATVRALMPLGLSLGIPPALLIAMFPAVNGYFFIPNYGTIV
AAINFDRTGTTGIGKYVLNHSFMIPGLIATFTSIGIGMLLISIMF"
misc_feature complement(396050..397360)
/locus_tag="BAMEG_0444"
/note="anaerobic C4-dicarboxylate transporter; Reviewed;
Region: PRK09412"
/db_xref="CDD:181832"
gene 397871..399610
/locus_tag="BAMEG_0445"
/db_xref="GeneID:7786887"
CDS 397871..399610
/locus_tag="BAMEG_0445"
/note="identified by match to protein family HMM PF00015;
match to protein family HMM PF00672"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis protein"
/protein_id="YP_002813057.1"
/db_xref="GI:227813048"
/db_xref="GeneID:7786887"
/translation="MKKYWHKLSFLQKNVLLTVLVILTLVGTMGALSFNMFQNSMMSI
FERHSFETGDTVLHKLDEEIVRDVTKDPVAQREKREKLTEKLDEATEELNSVGQTYIV
GAKKNEKGELLIVDLSTDLANVVEVRPGEYYKQLDLWMEAYDKVMSTKKANMTVVYED
LLGTWVTILEPIKDGEGNIVAIVAADVDASIVPSTKEKFIIQGLMFICISVLIATVIQ
FLIVRNALAPLRDLREGLRRVGEGDLNIKLEERSDDIGIINSYFNNTIEKFKGIIDKV
KQTAEQVSSSSQELSVSTKENSMAVQEIVSSMVELRAGAQLQETSVPQYLGIVYEVED
KMEEITNAAKQMEKVSEGIEHHSVKGNGVTKQAINQMNIIQNAVQDLSSIIYSLEVRS
KEISDIVTVITSISNQTNSLALHATIEASRAEETGEGFAVVADEVRKLAEQMEASAKD
IANLIRETQAGTEEAVVSIRKASKEVESGMKLVEMNGAFFEEISKSAQSVTNQVRVVS
SNSSDILQNSQNIVRVVNELSLIANTYTNSSSNVEESMKEQEMSVQDIAELASSLSWL
SQELQELIGEFKS"
misc_feature 398480..398674
/locus_tag="BAMEG_0445"
/note="HAMP domain; Region: HAMP; pfam00672"
/db_xref="CDD:189662"
misc_feature order(398546..398548,398555..398560,398564..398569,
398576..398581,398585..398587,398633..398635,
398639..398644,398651..398656,398660..398665,
398672..398674)
/locus_tag="BAMEG_0445"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature 398777..399538
/locus_tag="BAMEG_0445"
/note="Methyl-accepting chemotaxis-like domains
(chemotaxis sensory transducer); Region: MA; smart00283"
/db_xref="CDD:197627"
misc_feature 398861..399457
/locus_tag="BAMEG_0445"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature order(398882..398887,398894..398899,398906..398908,
398915..398920,398924..398929,398936..398938,
398945..398950,398957..398959,398966..398971,
398978..398983,398990..398992,398999..399004,
399008..399013,399023..399025,399029..399034,
399041..399043,399050..399055,399062..399067,
399074..399076,399083..399085,399092..399097,
399104..399106,399116..399118,399125..399127,
399146..399148,399158..399160,399167..399169,
399176..399181,399188..399190,399197..399202,
399209..399214,399218..399223,399230..399235,
399272..399277,399284..399286,399293..399298,
399305..399307,399314..399319,399323..399328,
399335..399340,399347..399349,399356..399361,
399368..399370,399377..399382,399386..399391,
399398..399403,399407..399412,399419..399421,
399428..399433,399440..399442,399449..399454)
/locus_tag="BAMEG_0445"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature 399092..399193
/locus_tag="BAMEG_0445"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
misc_binding 399672..399773
/note="TPP riboswitch (THI element)"
/bound_moiety="thiamin/thiamin pyrophosphate"
gene 399874..400194
/locus_tag="BAMEG_0447"
/db_xref="GeneID:7782369"
CDS 399874..400194
/locus_tag="BAMEG_0447"
/note="identified by match to protein family HMM PF01910"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813058.1"
/db_xref="GI:227813049"
/db_xref="GeneID:7782369"
/translation="MSQQVTMSFSVVPQAKTKDVYSVVDKAIEVVQQSGVRYEVGAME
TTLEGELDVLLDVVKRAQQACVDAGAEEVITSIKIHYRPSTGVTIDEKVWKYRDEYAK
PEAI"
misc_feature 399892..400164
/locus_tag="BAMEG_0447"
/note="Domain of unknown function DUF77; Region: DUF77;
pfam01910"
/db_xref="CDD:202041"
gene 400247..400939
/locus_tag="BAMEG_0448"
/db_xref="GeneID:7785263"
CDS 400247..400939
/locus_tag="BAMEG_0448"
/note="identified by match to protein family HMM PF00528"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002813059.1"
/db_xref="GI:227813050"
/db_xref="GeneID:7785263"
/translation="MSLFKIEPWILPKPSAIVQELIGMKDLLLPNTMQTLQEVIIGLF
FAILIGTSIAILMDVIPLFRILINPLLVISQTIPIVVLAPLFIIWFGYGMLPKVMVVI
LVCFFPIALSILEGFQTVDKNMLKLLQTMKATKWQVYQKVKFPAVLPYFFSGLKIAVT
YSVMGAIIGEWLGASEGLGVMLTRATKSFLTARVFGVAAIIVMVTLCLYFIVEFMARI
TAPWIYRKDGRK"
misc_feature 400250..400912
/locus_tag="BAMEG_0448"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
system, permease component [Inorganic ion transport and
metabolism]; Region: TauC; COG0600"
/db_xref="CDD:30945"
misc_feature 400343..400870
/locus_tag="BAMEG_0448"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(400388..400393,400400..400405,400418..400420,
400445..400456,400460..400489,400496..400501,
400505..400507,400553..400558,400562..400564,
400568..400570,400577..400582,400586..400588,
400598..400603,400610..400612,400661..400663,
400703..400708,400715..400717,400736..400747,
400754..400759,400796..400801,400829..400834,
400841..400846,400850..400855,400862..400867)
/locus_tag="BAMEG_0448"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(400463..400507,400736..400753)
/locus_tag="BAMEG_0448"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(400505..400507,400538..400540,400754..400756,
400790..400792,400799..400801,400829..400831)
/locus_tag="BAMEG_0448"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(400613..400651,400667..400672,400682..400684)
/locus_tag="BAMEG_0448"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 400936..401058
/locus_tag="BAMEG_0449"
/db_xref="GeneID:7784748"
CDS 400936..401058
/locus_tag="BAMEG_0449"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
premature stop"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_002813060.1"
/db_xref="GI:227813051"
/db_xref="GeneID:7784748"
/translation="MKKGLKVMLAALLAVGVAGCNPAKKEESASKDQKVKVVLD"
gene 401158..401934
/locus_tag="BAMEG_0450"
/db_xref="GeneID:7782809"
CDS 401158..401934
/locus_tag="BAMEG_0450"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
premature stop; identified by match to protein family HMM
PF09084"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_002813061.1"
/db_xref="GI:227813052"
/db_xref="GeneID:7782809"
/translation="MTAEQMIASGKADFAISAQENVTLARVEGIPVVSVGAIIQHNTS
AFASLKKDNMTSPKDFEGKRYGGWGGPAEEATLKTIMDKHQADFNKVEKIILGQTDFF
KSIGRDADFEWIYYGWDGIEAKRQGKELNTIMVKDLDPALDFYSPVMITSEKHTKQDK
DFVKKFMSATTEGYNFAIKEPKEAADILIKAVPDVNKDLVQESQKWLSTKYQDDAKAW
GVQKEEVWTNYMNFLYDNKVIKKKIDVKDAFTNEFLPSEK"
misc_feature 401164..401709
/locus_tag="BAMEG_0450"
/note="NMT1/THI5 like; Region: NMT1; pfam09084"
/db_xref="CDD:192206"
gene 401931..402680
/locus_tag="BAMEG_0451"
/db_xref="GeneID:7782428"
CDS 401931..402680
/locus_tag="BAMEG_0451"
/note="identified by match to protein family HMM PF00005"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002813062.1"
/db_xref="GI:227813053"
/db_xref="GeneID:7782428"
/translation="MRGLQIKDIVKSFDGNNVLANISASIREGEFVSFVGPSGCGKST
LLNMIANVENPTSGSVTYNDKHIQEQDVVSYMPQQDLLLPWRSALQNIVLPLEIEGKP
KKQRLTEGMEALKQFELDEYADHYPDELSGGMRQRISFLRTYLCEKPIMLLDEPFGKL
DAFTKMEVHSWLLNSWHQEKQTIVMVTHDLDEAILLSDRVFILSQRPASIVGEVQVKL
PRPRTMDMLTSIELKKDKEEILRVLAPYMKK"
misc_feature 401931..402653
/locus_tag="BAMEG_0451"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
system, ATPase component [Inorganic ion transport and
metabolism]; Region: TauB; COG1116"
/db_xref="CDD:31313"
misc_feature 401940..402584
/locus_tag="BAMEG_0451"
/note="ATP-binding cassette domain of the nitrate and
sulfonate transporters; Region:
ABC_NrtD_SsuB_transporters; cd03293"
/db_xref="CDD:213260"
misc_feature 402036..402059
/locus_tag="BAMEG_0451"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213260"
misc_feature order(402045..402050,402054..402062,402162..402164,
402390..402395,402492..402494)
/locus_tag="BAMEG_0451"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213260"
misc_feature 402153..402164
/locus_tag="BAMEG_0451"
/note="Q-loop/lid; other site"
/db_xref="CDD:213260"
misc_feature 402318..402347
/locus_tag="BAMEG_0451"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213260"
misc_feature 402378..402395
/locus_tag="BAMEG_0451"
/note="Walker B; other site"
/db_xref="CDD:213260"
misc_feature 402402..402413
/locus_tag="BAMEG_0451"
/note="D-loop; other site"
/db_xref="CDD:213260"
misc_feature 402480..402500
/locus_tag="BAMEG_0451"
/note="H-loop/switch region; other site"
/db_xref="CDD:213260"
gene 403068..404612
/locus_tag="BAMEG_0452"
/db_xref="GeneID:7783062"
CDS 403068..404612
/locus_tag="BAMEG_0452"
/note="identified by match to protein family HMM PF00005"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002813063.1"
/db_xref="GI:227813054"
/db_xref="GeneID:7783062"
/translation="MSILTVENLSHSYGEKTILYNACFRLLKGEHVGVVGGNGIGKST
LLRILTGELIHDDGNIEWFPHVKIGFLQQHMDLQEGMTIEGYLQSAFADLYAIECEML
KIAEEMNGAGEVEKLLVKYGELQTILESSNFYHIHAEVEEVAIGLGLFEIGLKKDVSK
LSGGQRTKLLLGKLLLEKADVLLLDEPTNYLDTAHIEWLQSYLRLYEKAYVIISHDEL
FLNSITNVIFHLEGGKVKRYVGNYEKFVQSYQVQKKQLQSAYVKQQKEISQLETFIQK
NKIRKAKQAKSREKVLEKMQRIEKIHPVPRSRFDFNVYEEPVSRILQAEKLRIGYSDP
LCPELNLQVKKGEKIAIIGHNGIGKTTMLKTLLGQIKPLSGSISVGERVNPAYFAQEE
FASETTPLEKVWAERPDMTKKEVRQALAKCGLKEEHVLKPIRLLSGGEQTKVRLCELI
VTRSNVLILDEPTNHLDIETKKSLQEALQQYKGTVLLVSHEPSFYEAWITKVWNIEEW
NAEQYE"
misc_feature 403068..404588
/locus_tag="BAMEG_0452"
/note="ATPase components of ABC transporters with
duplicated ATPase domains [General function prediction
only]; Region: Uup; COG0488"
/db_xref="CDD:30834"
misc_feature 403083..403769
/locus_tag="BAMEG_0452"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
misc_feature 403173..403196
/locus_tag="BAMEG_0452"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature order(403182..403187,403191..403199,403284..403286,
403620..403625,403710..403712)
/locus_tag="BAMEG_0452"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature 403275..403286
/locus_tag="BAMEG_0452"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature 403548..403577
/locus_tag="BAMEG_0452"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature 403608..403625
/locus_tag="BAMEG_0452"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature 403632..403643
/locus_tag="BAMEG_0452"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature 403698..403718
/locus_tag="BAMEG_0452"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
misc_feature 403749..404000
/locus_tag="BAMEG_0452"
/note="ABC transporter; Region: ABC_tran_2; pfam12848"
/db_xref="CDD:205105"
misc_feature 404031..404588
/locus_tag="BAMEG_0452"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
gene complement(405073..407097)
/locus_tag="BAMEG_0453"
/db_xref="GeneID:7787492"
CDS complement(405073..407097)
/locus_tag="BAMEG_0453"
/note="identified by match to protein family HMM PF00041;
match to protein family HMM PF00553; match to protein
family HMM PF00704"
/codon_start=1
/transl_table=11
/product="chitinase B"
/protein_id="YP_002813064.1"
/db_xref="GI:227813055"
/db_xref="GeneID:7787492"
/translation="MKSKKFTLLLLSLLLFLPLFLTNFITPNVVLADSQKQDQKIVGY
FPSWGIYGRNYQVADIDASKLTHLNYAFADICWNGKHGNPSTHPDNPNKQTWNCKESG
VPLQNKEVPNGTLVLGEPWADVTKSYPGSGTTWEDCDKYARCGNFGELKRLKAKYPHL
KTIISVGGWTWSNRFSDMAADEKTRKVFADSTVDFLREYGFDGVDLDWEYPGVETIPG
GSYRPEDKQNFTLLLQDVRNALTKAGAEDGKQYLLTIASGASQRYADHTELKKISQIL
DWINIMTYDFHGGWEATSNHNAALYKDPNDPAADTKFYVDGAIDIYTNEGVPADKLVL
GVPFYGRGWKSCGKENNGQYQPCKPGSDGKLASKGTWDDYSTGDTGVYDYGDLAANYV
NKNGFVRGWNDVAKVPYLYNATTGTFISYDDNESMKYKTDYIKTKGLSGAMFWELSGD
CRTSPKYSCSGPKLLDTLVKELLGGPITQKDIEPPTNVKNIAVTNKNSNSVQLNWTAS
TDNVGVTEYEITAGEEKWSTTTNSIAIKNLKPNTEYTFSILAKDAAGNKSQPTSILVK
TDDANTTPPGGNSNATFSVTSNWGSGYNFSIVIKNSGTTPIKNWKLEFDYNGNLTQVW
DSKISSKINNHYVITNAGWNGEIPPGGSITIGGAGTGTPAELVNASISEN"
misc_feature complement(405748..406980)
/locus_tag="BAMEG_0453"
/note="Glyco_18 domain; Region: Glyco_18; smart00636"
/db_xref="CDD:197811"
misc_feature complement(405748..406977)
/locus_tag="BAMEG_0453"
/note="The GH18 (glycosyl hydrolases, family 18) type II
chitinases hydrolyze chitin, an abundant polymer of
N-acetylglucosamine and have been identified in bacteria,
fungi, insects, plants, viruses, and protozoan parasites.
The structure of this domain is an...; Region:
GH18_chitinase; cd06548"
/db_xref="CDD:119365"
misc_feature complement(order(405763..405765,406081..406083,
406243..406248,406252..406254,406471..406473,
406477..406479,406483..406485,406882..406884,
406966..406968))
/locus_tag="BAMEG_0453"
/note="active site"
/db_xref="CDD:119365"
misc_feature complement(<405352..405657)
/locus_tag="BAMEG_0453"
/note="Uncharacterized protein contain chitin-binding
domain type 3 [General function prediction only]; Region:
COG3979"
/db_xref="CDD:33759"
misc_feature complement(405397..405645)
/locus_tag="BAMEG_0453"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; Region: FN3; cd00063"
/db_xref="CDD:28945"
misc_feature complement(order(405433..405435,405478..405480,
405643..405645))
/locus_tag="BAMEG_0453"
/note="Interdomain contacts; other site"
/db_xref="CDD:28945"
misc_feature complement(order(405418..405423,405427..405432))
/locus_tag="BAMEG_0453"
/note="Cytokine receptor motif; other site"
/db_xref="CDD:28945"
misc_feature complement(<405166..405342)
/locus_tag="BAMEG_0453"
/note="CBD_II domain; Region: CBD_II; smart00637"
/db_xref="CDD:197812"
gene 407469..407840
/locus_tag="BAMEG_0454"
/db_xref="GeneID:7783648"
CDS 407469..407840
/locus_tag="BAMEG_0454"
/note="identified by match to protein family HMM PF09350"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813065.1"
/db_xref="GI:227813056"
/db_xref="GeneID:7783648"
/translation="MDVFLNIAEEKIRQAIRNGDLDNIPGKGKPLQLEDLSMVPPELR
MSYKILKNAGMIPPEMELQKDILKIEDLIACCYDEEERKKLQQELTAKTLRFQQVMEK
RKIKDSSAFRMYQDKVFHKLR"
misc_feature 407487..407696
/locus_tag="BAMEG_0454"
/note="Domain of unknown function (DUF1992); Region:
DUF1992; pfam09350"
/db_xref="CDD:192260"
gene 407851..408165
/locus_tag="BAMEG_0455"
/db_xref="GeneID:7781871"
CDS 407851..408165
/locus_tag="BAMEG_0455"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813066.1"
/db_xref="GI:227813057"
/db_xref="GeneID:7781871"
/translation="MKKFETIEELATYIEEQQLVLLFIKTENCGVCDVMLRNVNYVLE
NYDYVEKIEILLQDMQEVAGRYAVFTGPTILLFHNGKEILRESRFISLENLERTIQLF
EE"
misc_feature 407872..408150
/locus_tag="BAMEG_0455"
/note="TRX family; composed of two groups: Group I, which
includes proteins that exclusively encode a TRX domain;
and Group II, which are composed of fusion proteins of TRX
and additional domains. Group I TRX is a small ancient
protein that alter the redox...; Region: TRX_family;
cd02947"
/db_xref="CDD:48496"
misc_feature order(407935..407937,407944..407946)
/locus_tag="BAMEG_0455"
/note="catalytic residues [active]"
/db_xref="CDD:48496"
gene 408179..408430
/locus_tag="BAMEG_0456"
/db_xref="GeneID:7782500"
CDS 408179..408430
/locus_tag="BAMEG_0456"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813067.1"
/db_xref="GI:227813058"
/db_xref="GeneID:7782500"
/translation="MEFIIFILLFVVIGIIVTAVRSNKKKVNLMKQNNIHNSSNSSSP
LFFFAGSDNDSSHGGSHDCGGSFGGDSGGSCDGGGGGGD"
gene 408713..409294
/locus_tag="BAMEG_0457"
/db_xref="GeneID:7786272"
CDS 408713..409294
/locus_tag="BAMEG_0457"
/note="identified by match to protein family HMM PF00440;
match to protein family HMM PF08360"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_002813068.1"
/db_xref="GI:227813059"
/db_xref="GeneID:7786272"
/translation="MRRSAEEIKKEIAYKAEILFSQKGYAATSMEEICEITERSKGSI
YYHFKSKEELFLFVVKQHTYDWLEKWNEKEKLYSTSTEKLYALAEYHVEDIQQPISNA
IEEFSMSQVVSKEILDEMLALTRESYVMFETLIEAGIQSGEFREDNTRDLMYIVNGLL
SGLGVLYYELDYKELKRIYKKAIDVLLKGMAAE"
misc_feature 408767..409288
/locus_tag="BAMEG_0457"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature 408767..408880
/locus_tag="BAMEG_0457"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
misc_feature 408896..409288
/locus_tag="BAMEG_0457"
/note="QacR-like protein, C-terminal region; Region:
TetR_C_5; pfam08360"
/db_xref="CDD:203917"
gene 409361..410593
/locus_tag="BAMEG_0458"
/db_xref="GeneID:7787280"
CDS 409361..410593
/locus_tag="BAMEG_0458"
/note="identified by match to protein family HMM PF07690"
/codon_start=1
/transl_table=11
/product="major facilitator family transporter"
/protein_id="YP_002813069.1"
/db_xref="GI:227813060"
/db_xref="GeneID:7787280"
/translation="MNALFKNRAFMLVMASDILQQFAIWIRNMALLYFIMERTNNDPV
SVSLLSVMEYAPIFIFSFIGGALADRWNPKRTMVAGDVLSVLSIIGIVLLLKLDYWQA
IFFATLISAIVGQFSQPSSSRIFKRYVKEEQVANAIAFNQTLQSLFMIFGPVVGSLVY
TQLGLFTSLYSLIILFLLSAIALSFLPKWVEQEQVARDSLKNDIKEGWKYVLHTKNLR
MITITFTIMGLAVGLTNPLEVFLVIERLGMEKEAVQYLAAADGIGMLIGGIVAAVFAS
KVNPKKMFVFGMSILAMSFLVEGLSTSFWITSFMRFGTGICLACVNIVVGTLMIQLVP
ENMVGRVNGTILPLFMGAMLIGTALAGGLKEMTSLVIVFCIAMALILLAIGPVLRMQI
KKEDVTTKEELTNSLASK"
misc_feature 409388..410449
/locus_tag="BAMEG_0458"
/note="H+ Antiporter protein; Region: 2A0121; TIGR00900"
/db_xref="CDD:162098"
misc_feature 409445..410530
/locus_tag="BAMEG_0458"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(409445..409450,409454..409459,409508..409510,
409517..409522,409529..409531,409541..409546,
409550..409555,409700..409705,409712..409717,
409724..409729,409736..409738,409772..409777,
409784..409789,409805..409807,410042..410044,
410051..410056,410063..410068,410075..410077,
410117..410119,410129..410131,410141..410143,
410150..410152,410162..410164,410303..410305,
410312..410317,410324..410326,410336..410341,
410348..410350,410381..410386,410393..410398,
410405..410410,410417..410419)
/locus_tag="BAMEG_0458"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 410707..410901
/locus_tag="BAMEG_0459"
/db_xref="GeneID:7782739"
CDS 410707..410901
/locus_tag="BAMEG_0459"
/note="identified by match to protein family HMM PF01381"
/codon_start=1
/transl_table=11
/product="DNA-binding protein"
/protein_id="YP_002813070.1"
/db_xref="GI:227813061"
/db_xref="GeneID:7782739"
/translation="MKNQIYELRTENNISQGALADKCKVSRQTINAIENNKYDPSLAL
AFRLAEVLGTTVDKLFLYKQ"
misc_feature 410713..410883
/locus_tag="BAMEG_0459"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(410722..410724,410734..410736,410809..410811)
/locus_tag="BAMEG_0459"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(410731..410733,410806..410808)
/locus_tag="BAMEG_0459"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(410752..410757,410788..410790,410797..410799,
410809..410814)
/locus_tag="BAMEG_0459"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene 410914..411306
/locus_tag="BAMEG_0460"
/db_xref="GeneID:7784733"
CDS 410914..411306
/locus_tag="BAMEG_0460"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813071.1"
/db_xref="GI:227813062"
/db_xref="GeneID:7784733"
/translation="MGKEKISLFVTILVAIGTLLYALYYWLTELQVNWYALFICSIAL
HYLFKSSASHSVEGETEENQDLEKHVLKTSANVTYYVLVVFIFGLFFASVGFNRWIDF
HNIPLLFALCAAIVVKPAVEFLIVRRYR"
gene complement(411333..412616)
/locus_tag="BAMEG_0461"
/db_xref="GeneID:7783672"
CDS complement(411333..412616)
/locus_tag="BAMEG_0461"
/note="identified by match to protein family HMM PF07690"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813072.1"
/db_xref="GI:227813063"
/db_xref="GeneID:7783672"
/translation="MKKMSRQEKSWILYDWANSVYSLVITTALFPIYFKAAAKEAGLS
GATSTAYWGYANSFATLLISILAPILGTVADYKGFKKRFFTFFFGLGIVFTSMLAVVP
TSQWYLLLGCYMLALVGFAGANIFYDAFLVDVTSEDRMDRISTRGFALGYIGSTIPFI
GCIALIILAQKGTIPLSVGIASQISFAITALWWGLFTIPMLKNVEQTHYIERHPKPIA
MSFKRLADTFKNIKEYKTVFMFLIAYFFYIDGVDTIITMSTAYGTDLGISATNLLIIL
FVTQIVACPFALLYGKLSTTFTGKKMLYVGIIIYIIICIYAYFLKTTLDFWILAMLVA
TSQGGIQALSRSYFAKLVPKESANEFFGFYNIFGKFAAIMGPVLVGVTTQLTGKTNAG
VLSIIVLFIIGGFLLTRVPENNTSVTPPNPKTKTL"
misc_feature complement(411444..412616)
/locus_tag="BAMEG_0461"
/note="Permeases of the major facilitator superfamily
[General function prediction only]; Region: COG2270"
/db_xref="CDD:32451"
misc_feature complement(<411456..411908)
/locus_tag="BAMEG_0461"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(411501..411503,411519..411524,
411531..411536,411570..411572,411579..411584,
411591..411596,411603..411608,411744..411749,
411753..411758,411768..411770,411777..411782,
411789..411791,411840..411845,411849..411857,
411864..411866))
/locus_tag="BAMEG_0461"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(412725..414038)
/locus_tag="BAMEG_0462"
/db_xref="GeneID:7787577"
CDS complement(412725..414038)
/locus_tag="BAMEG_0462"
/note="identified by match to protein family HMM PF01663"
/codon_start=1
/transl_table=11
/product="type I phosphodiesterase/nucleotide
pyrophosphatase family protein"
/protein_id="YP_002813073.1"
/db_xref="GI:227813064"
/db_xref="GeneID:7787577"
/translation="MDKALTNRVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKV
EPIYPSVTYPSHSTIVTGNYPNKHGVVSNTLLQPGRESPDWHWYRKSIKGTTLYDEAH
KANLTTAALLWPVTGRANIDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHI
RNGLSQPELDDFVLASAVHTIQTKKPNVMFVHFTDLDTQRHYHGFESKETIAAIHRHD
ERLGQIIQALKDSDLYEESTIIALGDHSALSENKAIQLNVLFHQKGLISVNSKGNLVD
WKVYCQSCDGSAYVYVKDKNDTDTIREVQLLLEELLQHKQNGIEFILHDEDAKECGAD
GNCLFMLEAREGYYFTENYTGDFIKEITEKDVTPSKKYTFGTHGYSPTKPNYETIFIA
AGKGIKSGVTIPYMRLIDESPTIARLLGLHLGETDGSIVEDLLQL"
misc_feature complement(<413211..414017)
/locus_tag="BAMEG_0462"
/note="Sulfatase; Region: Sulfatase; cl10460"
/db_xref="CDD:213119"
misc_feature complement(412899..414014)
/locus_tag="BAMEG_0462"
/note="Type I phosphodiesterase / nucleotide
pyrophosphatase; Region: Phosphodiest; pfam01663"
/db_xref="CDD:201911"
gene 414192..414485
/locus_tag="BAMEG_0463"
/db_xref="GeneID:7786575"
CDS 414192..414485
/locus_tag="BAMEG_0463"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813074.1"
/db_xref="GI:227813065"
/db_xref="GeneID:7786575"
/translation="MDWLDGFGIFYIIGGITIILVFAISYLLKKRFPDKQFDIIFALS
LILLCLASFPVTMMVIGGWEGMGYGFIGFFVLLGTLIGMIAHQLVKISRKSYV"
misc_feature 414264..414461
/locus_tag="BAMEG_0463"
/note="YesK-like protein; Region: YesK; pfam14150"
/db_xref="CDD:206319"
gene 414833..416359
/gene="proS1"
/locus_tag="BAMEG_0464"
/db_xref="GeneID:7785791"
CDS 414833..416359
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="catalyzes the formation of prolyl-tRNA(Pro) from
proline and tRNA(Pro)"
/codon_start=1
/transl_table=11
/product="prolyl-tRNA synthetase"
/protein_id="YP_002813075.1"
/db_xref="GI:227813066"
/db_xref="GeneID:7785791"
/translation="MAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPY
GYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDE
KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLW
QEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATYTIES
LMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGVSTRMIGGLIMVHS
DNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVARVKIDASNKTPGWKF
NEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEEIHNSLF
NKAKVFRDENTYSVTNFEEMKKLADEKQGFIKAMWCGELACEEKLKEEVASRCMPFEQ
EHLAEECVCCVNKWCIGEKRINALLDRKDEKDFGLHNKCNPKSFLVLQFVSCIFKMEG
"
misc_feature 414839..416212
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="prolyl-tRNA synthetase; Provisional; Region:
PRK08661"
/db_xref="CDD:181528"
misc_feature 414875..415654
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="Prolyl-tRNA synthetase (ProRS) class II core
catalytic domain. ProRS is a homodimer. It is responsible
for the attachment of proline to the 3' OH group of ribose
of the appropriate tRNA. This domain is primarily
responsible for ATP-dependent formation of...; Region:
ProRS_core_arch_euk; cd00778"
/db_xref="CDD:29823"
misc_feature order(414923..414928,414950..414961,414980..414982,
415031..415039,415043..415048,415109..415111,
415115..415129,415193..415195,415253..415255,
415301..415303)
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29823"
misc_feature 415025..415048
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="motif 1; other site"
/db_xref="CDD:29823"
misc_feature order(415169..415171,415175..415177,415262..415264,
415268..415270,415289..415297,415304..415306,
415310..415312,415316..415318,415511..415513,
415517..415522,415526..415528,415610..415618,
415622..415624,415628..415630)
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="active site"
/db_xref="CDD:29823"
misc_feature 415259..415270
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="motif 2; other site"
/db_xref="CDD:29823"
misc_feature 415616..415630
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="motif 3; other site"
/db_xref="CDD:29823"
misc_feature 415670..416221
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="ProRS Prolyl-anticodon binding domain, long version
found predominantly in eukaryotes and archaea. ProRS
belongs to class II aminoacyl-tRNA synthetases (aaRS).
This alignment contains the anticodon binding domain,
which is responsible for specificity in...; Region:
ProRS_anticodon_zinc; cd00862"
/db_xref="CDD:29802"
misc_feature order(415721..415726,415835..415837,415853..415855,
415877..415879,415907..415909,415913..415915)
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="anticodon binding site; other site"
/db_xref="CDD:29802"
misc_feature order(416114..416116,416129..416131,416201..416203,
416210..416212)
/gene="proS1"
/locus_tag="BAMEG_0464"
/note="zinc-binding site [ion binding]; other site"
/db_xref="CDD:29802"
gene complement(416364..417197)
/locus_tag="BAMEG_0465"
/db_xref="GeneID:7783680"
CDS complement(416364..417197)
/locus_tag="BAMEG_0465"
/note="identified by match to protein family HMM
TIGR01167"
/codon_start=1
/transl_table=11
/product="lpxtg-motif cell wall anchor domain-containing
protein"
/protein_id="YP_002813076.1"
/db_xref="GI:227813067"
/db_xref="GeneID:7783680"
/translation="MTKIFILASTLSLSFFSGLNIGNAATENFSPITNAIVQNNDYFV
EGNSKDNNKPPGNGGSQDDSGSDGNGSDGSGSGDNGSGDNGSGGNGSGGNGSGENGSG
GNGSGSSGSGDNGSGGNGSGGNGSGENGSGGNGSGSSGSGENGSGGNGSGSSGSGENG
SGGNGSGGNGSGGNSSGGSGSGGSGSGDNSSGGSGSGGSGSGDNGSGGSGSQGGNRVK
GDSSSQGGNGSQGGNVKDNAKKQGDKLPNTATHYPASILMGLSTFLIGMLLFIRRKNA
K"
gene 417400..418278
/locus_tag="BAMEG_0466"
/db_xref="GeneID:7787281"
CDS 417400..418278
/locus_tag="BAMEG_0466"
/note="identified by match to protein family HMM PF00480"
/codon_start=1
/transl_table=11
/product="ROK family protein"
/protein_id="YP_002813077.1"
/db_xref="GI:227813068"
/db_xref="GeneID:7787281"
/translation="MKEYIAFDIGGTQIKYGIVSETGIVLKHKTVPTEIHLGGEQIIQ
KLILLSKKLMSEHTISGIGISTAGIVDVNRGVVTGGADHIPGYSTIPIINRLQEVLKV
PVSIENDVNCAALGEKWNGIGREKENFIMLTLGTGIGGAIFIDRELYRGHSYSAGEWG
NMLIEGKTFEEVASISGLIHLVRNYKGKGNWNGKTIFELYDKGDREVTQAVEVFFKHL
AIGISNLAYIFNPETIIIGGGITDRGNQFLKEVKEEVGRYLNKEIYSDCEIELAQNGN
RAGMIGAIYHFLHHHK"
misc_feature 417400..418275
/locus_tag="BAMEG_0466"
/note="Transcriptional regulator/sugar kinase
[Transcription / Carbohydrate transport and metabolism];
Region: NagC; COG1940"
/db_xref="CDD:32123"
misc_feature 417412..417879
/locus_tag="BAMEG_0466"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cd00012"
/db_xref="CDD:212657"
misc_feature order(417421..417432,417436..417438,417442..417444,
417724..417726,417796..417807)
/locus_tag="BAMEG_0466"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
gene 418407..419003
/locus_tag="BAMEG_0467"
/db_xref="GeneID:7786099"
CDS 418407..419003
/locus_tag="BAMEG_0467"
/note="identified by match to protein family HMM PF02342"
/codon_start=1
/transl_table=11
/product="putative tellurium resistance protein"
/protein_id="YP_002813078.1"
/db_xref="GI:227813069"
/db_xref="GeneID:7786099"
/translation="MPIILEKGQKIDLTKGQPKVAKLQVGLGWDPIGQSGGFLSSLFG
SKPNVDCDASVVMLEGDRFLNKNDLVYFGNKLSTCGSIIHSGDNLTGEGAGDDETIFV
ELHKVPSRINRLVFVVNIYDCVNRRQDFGMIRNAYIRIQNPQTGEELARYNLSDNYAG
KTTLIAGEMYRHGSEWKFSAVGEGTQDKNLSEIVSRYQ"
misc_feature 418410..419000
/locus_tag="BAMEG_0467"
/note="Uncharacterized proteins involved in stress
response, homologs of TerZ and putative cAMP-binding
protein CABP1 [Signal transduction mechanisms]; Region:
TerZ; COG2310"
/db_xref="CDD:32464"
misc_feature 418470..418997
/locus_tag="BAMEG_0467"
/note="Uncharacterized proteins involved in stress
response, similar to tellurium resistance terD; Region:
TerD_like; cd06974"
/db_xref="CDD:132992"
misc_feature order(418554..418556,418560..418562,418698..418700)
/locus_tag="BAMEG_0467"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:132992"
gene 419027..419611
/locus_tag="BAMEG_0468"
/db_xref="GeneID:7783616"
CDS 419027..419611
/locus_tag="BAMEG_0468"
/note="identified by match to protein family HMM PF02342"
/codon_start=1
/transl_table=11
/product="tellurium resistance protein"
/protein_id="YP_002813079.1"
/db_xref="GI:227813070"
/db_xref="GeneID:7783616"
/translation="MASISLKKGQKVDLTKTNPGLSKVLVGLGWDTNRYDGQNDFDLD
VSIFLVGANGKVSGAEDFVFYNNPKGANGAVEHLGDNRTGEGEGDDESIKVDLKNVPA
HIERICFTITIYDGEGRSQNFGQVSNSFVRILDEEKNAELIRYDLGEDFSIETAVVVG
ELYRHAGEWKFNAIGSGFQGGLASLCNNFGLDVE"
misc_feature 419033..419596
/locus_tag="BAMEG_0468"
/note="Uncharacterized proteins involved in stress
response, homologs of TerZ and putative cAMP-binding
protein CABP1 [Signal transduction mechanisms]; Region:
TerZ; COG2310"
/db_xref="CDD:32464"
misc_feature 419087..419596
/locus_tag="BAMEG_0468"
/note="Uncharacterized proteins involved in stress
response, similar to tellurium resistance terD; Region:
TerD_like; cd06974"
/db_xref="CDD:132992"
misc_feature order(419150..419152,419156..419158,419297..419299)
/locus_tag="BAMEG_0468"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:132992"
gene 419692..420276
/locus_tag="BAMEG_0469"
/db_xref="GeneID:7784379"
CDS 419692..420276
/locus_tag="BAMEG_0469"
/note="identified by match to protein family HMM PF02342"
/codon_start=1
/transl_table=11
/product="tellurium resistance protein"
/protein_id="YP_002813080.1"
/db_xref="GI:227813071"
/db_xref="GeneID:7784379"
/translation="MVIQLQKGQKIDLGKTSPGLTKAVIGLGWDIKSYDGGSDFDLDA
SAFLLDANGKCTKETDFIFYNNLQSPCGSVLHTGDNRTGEGEGEGDDEQLVVDLKKVP
ADVHRIAITVTIYDAEGRSQNFGQVGNAFVRLANEETNEEVLRFDLGEDFSIETAVVF
CELYRHNGQWKFNAVGSGFQGGLGALVRAYGLDA"
misc_feature 419698..420264
/locus_tag="BAMEG_0469"
/note="Uncharacterized proteins involved in stress
response, homologs of TerZ and putative cAMP-binding
protein CABP1 [Signal transduction mechanisms]; Region:
TerZ; COG2310"
/db_xref="CDD:32464"
misc_feature 419749..420264
/locus_tag="BAMEG_0469"
/note="Uncharacterized proteins involved in stress
response, similar to tellurium resistance terD; Region:
TerD_like; cd06974"
/db_xref="CDD:132992"
misc_feature order(419806..419808,419812..419814,419956..419958)
/locus_tag="BAMEG_0469"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:132992"
gene 420350..421141
/locus_tag="BAMEG_0470"
/db_xref="GeneID:7783414"
CDS 420350..421141
/locus_tag="BAMEG_0470"
/note="identified by match to protein family HMM PF03741"
/codon_start=1
/transl_table=11
/product="putative tellurium resistance protein"
/protein_id="YP_002813081.1"
/db_xref="GI:227813072"
/db_xref="GeneID:7783414"
/translation="MSILQGILDTYAQFFDLDMWIKVLQDPVSWGLIGTLVVLEGLLS
ADNALVLAVMVKHLPEEKRKKALFYGLIGAYVFRFIAIGIGMFLIKLAWVKVLGALYL
AWLSVKYFIDKRKGNAEEEEAHGMNQNSILFRMFGVFWGTVAMVELMDIAFSVDSVLA
AFGVSNEVWILLLGGMLGILMMRGIAGVFLKLLERIPELETTAYILILIIAAKMLLSV
IHIEVSHTLFFIILVVAFGATFILHYVKNSGQAKEEVAATKNNHK"
misc_feature 420458..421087
/locus_tag="BAMEG_0470"
/note="integral membrane protein, YkoY family; Region:
R_switched_YkoY; TIGR03716"
/db_xref="CDD:163428"
misc_feature 421251..422881
/note="potential frameshift: common BLAST hit:
gi|49480821|ref|YP_034730.1| tellurium resistance protein"
gene 421251..422402
/locus_tag="BAMEG_0471"
/db_xref="GeneID:7782186"
CDS 421251..422402
/locus_tag="BAMEG_0471"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813082.1"
/db_xref="GI:227813073"
/db_xref="GeneID:7782186"
/translation="MFSRFTLQPYALKDESDLKHFETLLEKRPQYELTENEMKFSYIA
CRILGVPNDVDEYFNELFDYSEAKGIEVLHEQNLNKVIDSEKLRHIQEVFGLHQEAPN
GLTVNRLVAHLSGKQLLPKVDNPDLQHYIHTTFISVLKLYEKQHNQSLKTEGFRRFLI
DMIKLSENYVAKWFSTINYKKQMPRIIWYGDAQESRIYFLYFLIMLGCDVLYYHPEGK
DGFENIDEEARTFVVSHSSRISLEPFPDRRRERVATVAYQASKEIEQVLHHDNSLLYK
PWQFRSYTPVARTLKTTYDELFLITKEKAFVRPTFFVENKHIYIPSLFAKISGVSKND
KEYFQRLKAVTSFDNSLLINTFPFTKEQKANFQYHYRDALDRGGNYIQI"
misc_feature 421353..>422387
/locus_tag="BAMEG_0471"
/note="Domain of unknown function (DUF4356); Region:
DUF4356; pfam14266"
/db_xref="CDD:206434"
gene 422405..422881
/locus_tag="BAMEG_0472"
/db_xref="GeneID:7787385"
CDS 422405..422881
/locus_tag="BAMEG_0472"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813083.1"
/db_xref="GI:227813074"
/db_xref="GeneID:7787385"
/translation="MNSHWWPHKRLPEGLQHGIAEAIIHTCESEMCKPIAKETKQDVA
LYVFAQLSQIPPNILEQLEKFDYSQDVPKIVIFNNEKSGELTRSDAVLLLFLNQIGVD
VFHFNPTGRNDIEPYIEAGAFDSHWLEEVNFDFEFHGSSAYKNLSQTIKGLFRPFL"
misc_feature <422405..422866
/locus_tag="BAMEG_0472"
/note="Domain of unknown function (DUF4356); Region:
DUF4356; pfam14266"
/db_xref="CDD:206434"
gene 422900..423982
/locus_tag="BAMEG_0473"
/db_xref="GeneID:7786404"
CDS 422900..423982
/locus_tag="BAMEG_0473"
/note="identified by match to protein family HMM PF05816"
/codon_start=1
/transl_table=11
/product="putative tellurite resistance protein"
/protein_id="YP_002813084.1"
/db_xref="GI:227813075"
/db_xref="GeneID:7786404"
/translation="MNNPVVLDSKTELNEQTAQDVRLQLRQDADVQRIYNAVDIKDQL
ELIELGKEPSMEISRFADQILHTMSLSKIEDSGELLKQLGKIMDRFDSKDFAEEKSGF
FSRMFKKADKMIEQIFSKYQTMGREIDKVYVEITKYQDEMKKSIGTLDGLYEQNLKYY
LDLEKYVVAGEMLLERLNTELVPMYEERVRNNDQLAGIELESLKNSVEILEQRIDDLE
KARMVALLTAPQIRMIQRGNNKLIGKINTAFITTIPIFKNGIIQAVNAKRQKLVADSM
AELDRRTNELLKKNAQNIATQSVEVARLSGSSSIKMETLEETWNIISRGMQETQQIEE
QNKREREESRKRMATLTENIKKELQG"
misc_feature 422987..423973
/locus_tag="BAMEG_0473"
/note="Toxic anion resistance protein (TelA); Region:
TelA; pfam05816"
/db_xref="CDD:147781"
gene complement(424018..426684)
/locus_tag="BAMEG_0474"
/db_xref="GeneID:7784137"
CDS complement(424018..426684)
/locus_tag="BAMEG_0474"
/note="identified by match to protein family HMM PF00122;
match to protein family HMM PF00689; match to protein
family HMM PF00690; match to protein family HMM PF00702;
match to protein family HMM TIGR01494"
/codon_start=1
/transl_table=11
/product="cation-transporting ATPase"
/protein_id="YP_002813085.1"
/db_xref="GI:227813076"
/db_xref="GeneID:7784137"
/translation="MSNWYSKTKDQTLIDLETNEQHGLTEEIVNERLTQYGANELATK
QKRSLWQRIFAQINDVLVYVLIIAALISAFVGEWADASIIALVVVLNAVIGVVQESKA
EQALEALKKMATPKAIVKRDGELKEIPSEHVVPGDIVMLDAGRYIPCDLRLIETANLK
VEESALTGESVPVDKDAIYHPSMQSDEQVPLGDQKNMAFMSTLVTYGRGVGVAVETGM
NSQIGKIATLLHEADDDMTPLQKSLAQVGKYLGFVAVAICIVMFLIGFLQGRDTLEMF
MTAISLAVAAIPEGLPAIVSIVLAIGVQRMIKQNVIIRKLPAVEALGSVTIICSDKTG
TLTQNKMTVTHFYSDNTYDQLERLNVNNDTQRLLLENMVLCNDASYNNESQTGDPTEI
ALLVAGSTFNMQKDHLEKIHERVNELPFDSDRKMMSTVHTYDESYYSMTKGAIDKLLP
LCTHIFKNGKIEGLTEDDKNQILEAAEVMSQEALRVLSFAFKQYNSSDVDIDHLEENL
IFIGLVGMIDPPRTEVKDSISECKKAGIRTVMITGDHKDTAFAIAKELGIAEEISEIM
IGTELDNISDTELANKINHLHVFARVSPEHKVKIVKALRAKGNIVSMTGDGVNDAPSL
KQADVGVAMGITGTDVAKGAADVVLTDDNFSSIVKAVEEGRNIYRNIKKSILFLLSCN
FGEIIALFLAILLGWATPLRPIHILWVNLITDTLPALSLGVDPEDPDVMKEKPRHAKE
SLFSGSVPFLIFNGFVIGLLTLIAFIAGAKFYTGDTNLFPLFPERIDEDALLHAQTMA
FVVLSFSQLVHSFNLRSRTKSIFSIGIFTNKYLVFSLLIGVLMQVCIISIPPLANIFG
VHALTMRDWGFVLLLSIIPLVVNEFIKLVKRN"
misc_feature complement(426463..426681)
/locus_tag="BAMEG_0474"
/note="Cation transporter/ATPase, N-terminus; Region:
Cation_ATPase_N; smart00831"
/db_xref="CDD:197900"
misc_feature complement(424021..426669)
/locus_tag="BAMEG_0474"
/note="Cation transport ATPase [Inorganic ion transport
and metabolism]; Region: MgtA; COG0474"
/db_xref="CDD:30822"
misc_feature complement(425722..426495)
/locus_tag="BAMEG_0474"
/note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
/db_xref="CDD:201018"
misc_feature complement(425320..425568)
/locus_tag="BAMEG_0474"
/note="Putative hydrolase of sodium-potassium ATPase alpha
subunit; Region: Hydrolase_like2; pfam13246"
/db_xref="CDD:205426"
misc_feature complement(424810..425295)
/locus_tag="BAMEG_0474"
/note="haloacid dehalogenase-like hydrolase; Region: HAD;
pfam12710"
/db_xref="CDD:205034"
misc_feature complement(425059..425061)
/locus_tag="BAMEG_0474"
/note="motif II; other site"
/db_xref="CDD:119389"
misc_feature complement(424030..424587)
/locus_tag="BAMEG_0474"
/note="Cation transporting ATPase, C-terminus; Region:
Cation_ATPase_C; pfam00689"
/db_xref="CDD:201396"
gene complement(426876..427100)
/locus_tag="BAMEG_0475"
/db_xref="GeneID:7786046"
CDS complement(426876..427100)
/locus_tag="BAMEG_0475"
/note="identified by match to protein family HMM PF06569"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813086.1"
/db_xref="GI:227813077"
/db_xref="GeneID:7786046"
/translation="MDLSVKSEENVEYMVEAIKEKLRMVNAGAMRAASFNEEMYEDLR
DIYEHVMKRETFSISEMQAITEELGTLIKK"
misc_feature complement(426882..427094)
/locus_tag="BAMEG_0475"
/note="Protein of unknown function (DUF1128); Region:
DUF1128; pfam06569"
/db_xref="CDD:148273"
gene 427275..427739
/locus_tag="BAMEG_0476"
/db_xref="GeneID:7787332"
CDS 427275..427739
/locus_tag="BAMEG_0476"
/note="identified by match to protein family HMM PF01451"
/codon_start=1
/transl_table=11
/product="low molecular weight phosphotyrosine protein
phosphatase family protein"
/protein_id="YP_002813087.1"
/db_xref="GI:227813078"
/db_xref="GeneID:7787332"
/translation="MVQVLFVCLGNICRSPMAEAIFRDLVVKEGLEEKIVIDSAGTGD
WHVGHPPHKGTQKILKENAVTFEGIKARQVEKEDLTKFDYIIAMDNKNIADLKSLGKT
GGYIGRLSDFVPDGGWTDVPDPYYTGNFQEVYDLVTEGCAKLLAFIRNEQGI"
misc_feature 427284..427712
/locus_tag="BAMEG_0476"
/note="Low molecular weight phosphatase family; Region:
LMWPc; cd00115"
/db_xref="CDD:29014"
misc_feature 427284..427709
/locus_tag="BAMEG_0476"
/note="Low molecular weight phosphotyrosine protein
phosphatase; Region: LMWPc; pfam01451"
/db_xref="CDD:201802"
misc_feature order(427296..427298,427302..427307,427311..427319)
/locus_tag="BAMEG_0476"
/note="active site"
/db_xref="CDD:29014"
gene 427793..428275
/locus_tag="BAMEG_0477"
/db_xref="GeneID:7784274"
CDS 427793..428275
/locus_tag="BAMEG_0477"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813088.1"
/db_xref="GI:227813079"
/db_xref="GeneID:7784274"
/translation="MAKKNNIARNIAIGVAAGVAVSMLKKENREKVKNTAEKAKTKMI
EIGENAKIKEKVQTVTDKGRELADLNVVKAKVAEIKKLTPSVVETLKETKEIFSKKKV
EPAEKPETIEIQAVSPKVDELKVEEEPVVAEDGGMKESRELFMKDSNVEEKKLKRTLS
"
misc_feature 428063..>428254
/locus_tag="BAMEG_0477"
/note="Domain of unknown function (DUF4075); Region:
DUF4075; pfam13294"
/db_xref="CDD:205474"
gene 428314..429183
/gene="yihY"
/locus_tag="BAMEG_0478"
/db_xref="GeneID:7785369"
CDS 428314..429183
/gene="yihY"
/locus_tag="BAMEG_0478"
/note="identified by match to protein family HMM PF03631;
match to protein family HMM TIGR00765"
/codon_start=1
/transl_table=11
/product="YihY family protein"
/protein_id="YP_002813089.1"
/db_xref="GI:227813080"
/db_xref="GeneID:7785369"
/translation="MRKILEKVRRNRTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAI
FPGLVFLITLLGFIDLQTESVLNLLEPYVPEDAMSLIEVNVDKVVNEQNGGLLSFGLL
SMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRALSIVFTLAIIFMIVFALIVPVFGQ
VIGAAVFKAIGLSDSFSYVWSITRLVASFFVLFALFSFLYTFAPDRKLKRREVISGAT
FATVGWIVVSYSFAYYVDKFANYANTYGGLGGIIILMLWFYLTGWVILLGGEINGLLH
HYRTGDNNSRNEK"
misc_feature 428449..429150
/gene="yihY"
/locus_tag="BAMEG_0478"
/note="Virulence factor BrkB; Region: Virul_fac_BrkB;
pfam03631"
/db_xref="CDD:202708"
gene complement(429369..431294)
/locus_tag="BAMEG_0479"
/db_xref="GeneID:7783625"
CDS complement(429369..431294)
/locus_tag="BAMEG_0479"
/note="identified by match to protein family HMM PF00122;
match to protein family HMM PF00702; match to protein
family HMM TIGR01494; match to protein family HMM
TIGR01512; match to protein family HMM TIGR01525"
/codon_start=1
/transl_table=11
/product="heavy metal-transporting ATPase"
/protein_id="YP_002813090.1"
/db_xref="GI:227813081"
/db_xref="GeneID:7783625"
/translation="MNSEVKTLQVQKSISHPSLWDTLKKHYELIFAITSGIFILAGWL
FTKNDVMNVGITCYILAYIVGGYAKAKEGIEDTIEEKELNVEMLMLIAAIGAAMIGYW
AEGAILIFIFALSGAMESYTLSKSQKEISALLDLQPEEALRISNGTEERVPVGRLQIN
DIILIKPGERVPADGTIHSGETNIDEAAITGEPIPNEKKHGDEVFAGTVNLRGAIEVK
ITKPSDQTLFQKIIRLVQSAQSEKSPSQLFIEKFEGTYVKGVLLVVTLMMFVPHFLLD
WSWNETFYRAMILLVVASPCALVAAITPATLSAISNGARNGILFKGGIHLERLASVKA
IAFDKTGTLTEGKPTVTDVYVRENMTEKEVLSITAAIESHSTHPLAESIVKYAQHTYD
ITLKKPENVEDVTGFGLKGIFESKAYKIGKADFIGEETKTFHNGVSASLEKEGKTVVY
ISDEEGILGLIALKDTLRQETIAAIRELQSIGVEAIMITGDNEETAKAIASESNIKEY
YASCLPETKVETIKKLKEKYGTVAMVGDGINDAPALATASIGVAMGEGTDVALETADV
VLMKNELSRLSQAIRLSKRMNRIVKQNVIFSLAVIAMLICSNFLQFLALPFGVIGHEG
STILVILNGLRLLKGNN"
misc_feature complement(429387..430994)
/locus_tag="BAMEG_0479"
/note="heavy metal translocating P-type ATPase; Region:
ATPase-IB_hvy; TIGR01525"
/db_xref="CDD:211666"
misc_feature complement(430311..430976)
/locus_tag="BAMEG_0479"
/note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
/db_xref="CDD:201018"
misc_feature complement(429591..429926)
/locus_tag="BAMEG_0479"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:214172"
gene 431565..432515
/locus_tag="BAMEG_0480"
/db_xref="GeneID:7783315"
CDS 431565..432515
/locus_tag="BAMEG_0480"
/note="identified by match to protein family HMM PF00892"
/codon_start=1
/transl_table=11
/product="transporter, EamA family"
/protein_id="YP_002813091.1"
/db_xref="GI:227813082"
/db_xref="GeneID:7783315"
/translation="MKTEKFFTHPIGVFIAAIVATFLWGSAFPFIKLSYAELGIQPKE
VGEQILFAGYRFFLSGVMLLFFFKLLGKDMNFKKGTGKQLVQIGLFQTFLQYICFYIG
MSYSSGIEGAIISGTSSFFQIILAHFLYKDDALNMRKIIGVSIGFCGVVLVNVPSDGS
LSFHFGIGSLLLLSAAMLYSYGNILAKEGSKTLDVGYMTAYQMIFGSIGLLCIGALQV
GIMPFTFSVHAILMLIYLSFLSAAGFCIWNTIMKYNKVGKVSMYMFFIPVFGVLLSSM
ILGEAIHSFVLFGLACVAAGIIVVNRTPAKQKIEQEKQVA"
misc_feature 431628..432029
/locus_tag="BAMEG_0480"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:144477"
misc_feature 431634..432458
/locus_tag="BAMEG_0480"
/note="Carboxylate/Amino Acid/Amine Transporter; Region:
2A78; TIGR00950"
/db_xref="CDD:162128"
misc_feature 432114..432470
/locus_tag="BAMEG_0480"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:144477"
gene 432638..433318
/locus_tag="BAMEG_0481"
/db_xref="GeneID:7782660"
CDS 432638..433318
/locus_tag="BAMEG_0481"
/note="identified by match to protein family HMM PF07947"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813092.1"
/db_xref="GI:227813083"
/db_xref="GeneID:7782660"
/translation="MNLLYMVLIGQIILFLIGAIYAIGQTKKTTNNIPLPLAVRLILS
FSLTASAIWIWLQDPSVEYSTWVALGMTLSTVGDLFMAGLIPIGHRLIGGMITFALAH
CFYVKAFLQTGISWNGFWIGLLVYGLFLIIGWFFFIRNEKQDKLFTIGALIYGLWVGG
MACFAFALYYENTGIWWIPAFGGLLFVISDFIIGVTDIGGRKLKYEPLWIWFTYVAAQ
MCIVYVGL"
misc_feature 432788..433306
/locus_tag="BAMEG_0481"
/note="YhhN-like protein; Region: YhhN; pfam07947"
/db_xref="CDD:203815"
gene 433551..433904
/gene="lepB_1"
/locus_tag="BAMEG_0482"
/db_xref="GeneID:7784825"
CDS 433551..433904
/gene="lepB_1"
/locus_tag="BAMEG_0482"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift; identified by match to protein family HMM
PF00717; match to protein family HMM TIGR02227"
/codon_start=1
/transl_table=11
/product="signal peptidase I"
/protein_id="YP_002813093.1"
/db_xref="GI:227813084"
/db_xref="GeneID:7784825"
/translation="MQKKKRWREFFGTIAIACLLVFLAKIFVFFPTTVKGASMKPTLQ
DGDKVIVNKLAKQFESYGREDIIVVKTDNFYVKRVIGLPGDVIEVRNDQLYVNHEVIE
EAYLQSNKKQAEKNL"
misc_feature 433638..>433796
/gene="lepB_1"
/locus_tag="BAMEG_0482"
/note="The S26 Type I signal peptidase (SPase; LepB;
leader peptidase B; leader peptidase I; EC 3.4.21.89)
family members are essential membrane-bound serine
proteases that function to cleave the amino-terminal
signal peptide extension from proteins that are...;
Region: S26_SPase_I; cd06530"
/db_xref="CDD:119398"
misc_feature order(433662..433664,433779..433781)
/gene="lepB_1"
/locus_tag="BAMEG_0482"
/note="Catalytic site [active]"
/db_xref="CDD:119398"
gene 433901..434083
/gene="sipS1"
/locus_tag="BAMEG_0483"
/db_xref="GeneID:7782584"
CDS 433901..434083
/gene="sipS1"
/locus_tag="BAMEG_0483"
/note="an automated process has identified a potential
problem with this gene model; the current end5 and/or the
end3 may need to extended or the current gene model may
need to be merged with a neighboring gene model; the
current gene model (or a revised gene model) may contain a
frame shift"
/codon_start=1
/transl_table=11
/product="signal peptidase I S"
/protein_id="YP_002813094.1"
/db_xref="GI:227813085"
/db_xref="GeneID:7782584"
/translation="MNLTEDFGPITVPKNKIFVMGDNRLISRDSRNGLGLIDKADVLG
ELAAIYYPFEHMKIIN"
misc_feature <433949..434032
/gene="sipS1"
/locus_tag="BAMEG_0483"
/note="The S26 Type I signal peptidase (SPase; LepB;
leader peptidase B; leader peptidase I; EC 3.4.21.89)
family members are essential membrane-bound serine
proteases that function to cleave the amino-terminal
signal peptide extension from proteins that are...;
Region: S26_SPase_I; cd06530"
/db_xref="CDD:119398"
gene complement(434127..436889)
/locus_tag="BAMEG_0484"
/db_xref="GeneID:7786086"
CDS complement(434127..436889)
/locus_tag="BAMEG_0484"
/note="identified by glimmer; putative"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002813095.1"
/db_xref="GI:227813086"
/db_xref="GeneID:7786086"
/translation="MTIENQFIQKVYYKTFLTEETSTPVSDVLGEAYINESTNEFSNI
SNIRFAQGELYYQNKDFEAAIFKWEKVNNELALWATKNIADAYFELGFLPKAEEMYQS
IQTEDTTLTMEVSLQLLSLYIEQDRLGLAFKTISEAVAFQPDYPNITSIARSFYEKQE
DWNNAIELAVQEGVRTKSLHWFDTLINYVNQGFTKQIKPEYFYESLKALYAIDQVQFK
ELVITLWNSYQNEKLHLPWIETINHLFLHIETDNNDDWHEIVERYQDTYFELITGEHF
MHEMQGLVPDLLTNWFSLTRAKDALFVSAAVLAWNEVSPTTLESLLVKSAGALLSNST
AETNVNMETVSHLFETIAVWAEKNDVDLSHQFTLLVHELCDLNVTQLLIAGTSDHDKL
SFVNSILGENILTETITTPILFKDDSQTEITEFTALDVHNIPNFDEFHQIMATSDQSE
LENKCIEIKLPSRFLRKNKFAFLVTPSVQGQVDKNSSYFEYLQAADSLIYVLNSASPL
HGKELDTLLYLREQVPNLQIHFVLHTNSADKNEKLMSKIKVHFPNAQFFPYSPSQESS
QQLGDVTESILSNLATRDIEQERIEKLIWFTQKTIAYLVNERVELENTLVKSVRWNKH
ISVKLNGFINNLTALEKDKIRSITESYLLTKEEITRDIHSQIPELLQSCSDLVQEDSD
FKLVHEELNTAMNERIQKHVQQVLLPKFTGFIQEWIETAHNEFIQAQSYLDEMSETFN
KLYKEERMKLPCDFKLLDDWHRDVVRMTNRITVSNINILLRFTPTQFFLKSAGKLFGN
MQKNQSMLANKYKQYIETEDYTEIAQTISKQFFLQFEVFEGALERDIMMFFKDPLSIL
KQNVEAAQLEIQEDEQTLATLRSNPETYHDPLAFFKLQLLQHKFILSTHKNNEDIYEF
NESPTI"
misc_feature complement(436386..436655)
/locus_tag="BAMEG_0484"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(436413..436418,436425..436430,
436437..436442,436518..436523,436530..436535,
436539..436544,436632..436637,436644..436649,
436653..436655))
/locus_tag="BAMEG_0484"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(436395..436397,436431..436433,
436476..436478,436485..436487,436497..436499,
436533..436535,436581..436583,436590..436592,
436602..436604,436638..436640))
/locus_tag="BAMEG_0484"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene 437364..437954
/locus_tag="BAMEG_0485"
/db_xref="GeneID:7782786"
CDS 437364..437954
/locus_tag="BAMEG_0485"
/note="identified by match to protein family HMM PF09335"
/codon_start=1
/transl_table=11
/product="dedA family protein"
/protein_id="YP_002813096.1"
/db_xref="GI:227813087"
/db_xref="GeneID:7782786"
/translation="MEQHIGELIAHYGYFGIIIALAGGIVGLPIPDEFLLTFVGYNVS
KGVMSGTAAFLSGMAGAMLGITLSYILGLKLGLPVLKKYGPKIRIKEHHIEKTHILFE
KYGPFLLMIGYFIPGVRHLTAYFAGMSNLTIWRFCLYAYGGALIWISVFIGLGWKLGE
KWRFVEYSLHHYGIWILSISVVVTCVVWFYIKKNRE"
misc_feature 437454..437948
/locus_tag="BAMEG_0485"
/note="Uncharacterized membrane-associated protein
[Function unknown]; Region: DedA; COG0586"
/db_xref="CDD:30931"
misc_feature 437454..437831
/locus_tag="BAMEG_0485"
/note="SNARE associated Golgi protein; Region:
SNARE_assoc; pfam09335"
/db_xref="CDD 