LOCUS NC_012586 2430033 bp DNA circular BCT 10-SEP-2012
DEFINITION Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence.
ACCESSION NC_012586
VERSION NC_012586.1 GI:227818258
DBLINK Project: 59081
KEYWORDS .
SOURCE Sinorhizobium fredii NGR234
ORGANISM Sinorhizobium fredii NGR234
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
REFERENCE 1 (bases 1 to 2430033)
AUTHORS Schmeisser,C., Liesegang,H., Krysciak,D., Bakkou,N., Le Quere,A.,
Wollherr,A., Heinemeyer,I., Morgenstern,B., Pommerening-Roser,A.,
Flores,M., Palacios,R., Brenner,S., Gottschalk,G., Schmitz,R.A.,
Broughton,W.J., Perret,X., Strittmatter,A.W. and Streit,W.R.
TITLE Rhizobium sp. strain NGR234 possesses a remarkable number of
secretion systems
JOURNAL Appl. Environ. Microbiol. 75 (12), 4035-4045 (2009)
PUBMED 19376903
REFERENCE 2 (bases 1 to 2430033)
AUTHORS Streit,W.R., Schmitz,R.A., Perret,X., Staehelin,C., Deakin,W.J.,
Raasch,C., Liesegang,H. and Broughton,W.J.
TITLE An evolutionary hot spot: the pNGR234b replicon of Rhizobium sp.
strain NGR234
JOURNAL J. Bacteriol. 186 (2), 535-542 (2004)
PUBMED 14702322
REFERENCE 3 (bases 1 to 2430033)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-APR-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 2430033)
AUTHORS Liesegang,H., Krysziak,D., Schmeisser,C., Bakkou,N., Le Quere,A.,
Strittmatter,A.W., Wollherr,A., Heinemeyer,I., Morgenstern,B.,
Gottschalk,G., Schmitz,R.A., Broughton,W.J., Perret,X. and
Streit,W.R.
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2007) Institute of Microbiology and Genetics,
Goettingen Genomics Laboratory, Grisebachstrasse 8, Goettingen,
Lower Saxony D-37077, Germany
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000874.
Rhizobium sp. NGR234 is available from Prof. Wolfgang Streit,
Biozentrum Klein Flottbek,Mikrobiologie, Ohnhorststr. 18 D-22609
Hamburg, wolfgang.streit@uni-hamburg.de.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..2430033
/organism="Sinorhizobium fredii NGR234"
/mol_type="genomic DNA"
/strain="NGR234"
/db_xref="taxon:394"
/plasmid="pNGR234b"
gene 245..1441
/gene="repA1"
/locus_tag="NGR_b00010"
/db_xref="GeneID:7788910"
CDS 245..1441
/gene="repA1"
/locus_tag="NGR_b00010"
/codon_start=1
/transl_table=11
/product="replication protein A"
/protein_id="YP_002822230.1"
/db_xref="GI:227818259"
/db_xref="GeneID:7788910"
/translation="MLQPRVQSVDEQEHLPSLLSADAQELAHQLQEHQKKIFSPTAQK
TMRLFSPAEAAAFIGIGEGYLRQIASEGHGPQPLSNGRRMYAVEDVERIRRVLDEGAK
TGKYIPHRRPGEKLQVISVMNFKGGSGKTTTSAHLSQYLALRGYRVLAIDLDPQASLS
ALFGHQPELDVGEAETLYGAIRYESPRPIADVVRSTYTTNLHLIPGNLELMEFEHETP
KAMIGGSAETLFFARIGEVLTEIESFYDIVVIDCPPQLGFLTMSALCAATSVLITVHP
QMLDVMSMSQFLSMTSELMAVVEKAGGRTSYDWMRYLVTRFEPNDGPQSQMTGFMRAI
FGNRMLHNAMVKSTAISDAGVTKQTLYEVERSQFIRGTYDRAMDSLSLVNAEIEEMIR
SVWGRK"
misc_feature 290..1435
/gene="repA1"
/locus_tag="NGR_b00010"
/note="plasmid partitioning protein RepA; Region:
partition_RepA; TIGR03453"
/db_xref="CDD:211820"
misc_feature 596..>712
/gene="repA1"
/locus_tag="NGR_b00010"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:73302"
misc_feature 617..637
/gene="repA1"
/locus_tag="NGR_b00010"
/note="P-loop; other site"
/db_xref="CDD:73302"
misc_feature 635..637
/gene="repA1"
/locus_tag="NGR_b00010"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:73302"
misc_feature <977..1114
/gene="repA1"
/locus_tag="NGR_b00010"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:73302"
misc_feature 995..997
/gene="repA1"
/locus_tag="NGR_b00010"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:73302"
gene 1445..2449
/gene="repB1"
/locus_tag="NGR_b00020"
/db_xref="GeneID:7789542"
CDS 1445..2449
/gene="repB1"
/locus_tag="NGR_b00020"
/codon_start=1
/transl_table=11
/product="replication protein B"
/protein_id="YP_002822231.1"
/db_xref="GI:227818260"
/db_xref="GeneID:7789542"
/translation="MARKNLIGISDSPAAPPDGERPAVERPIAGLAPGPRTSALVGGI
TRSLSNITQKVERAEELERQLAQGHAIVELEPSLVDASFIIDRLGVTPETQAALVQQI
RDHGQQVPILVRPHPEAENRYQVAYGHRRLAALREIGGKVKAVIRELSDEQLVISQGQ
ENNARTDLSYIERSLFATRLEDRGFSRETIMSALGVDKAALSKMISVVRRLPVEIIEA
IGAAPSFGRRRWMELADRLEHDGRRAKALAHIRQSPFMEMDSDRRFEKLFVVLAEARG
RAKAEAWLAPDRTRPVRIRDTDTETTLAFSKAAAPGFAEFVRGRLESLYLEYQQETGD
"
misc_feature 1448..2434
/gene="repB1"
/locus_tag="NGR_b00020"
/note="plasmid partitioning protein RepB; Region:
partition_RepB; TIGR03454"
/db_xref="CDD:188325"
misc_feature 1658..1933
/gene="repB1"
/locus_tag="NGR_b00020"
/note="ParB-like nuclease domain; Region: ParB;
smart00470"
/db_xref="CDD:197744"
gene 2455..2501
/locus_tag="NGR_b00030"
/db_xref="GeneID:7789543"
ncRNA 2455..2501
/locus_tag="NGR_b00030"
/ncRNA_class="antisense_RNA"
/product="antisense RNA regulator of RepB translation"
/note="ctRNA, p42d, RF00489"
/db_xref="GeneID:7789543"
gene 2541..2608
/locus_tag="NGR_b00040"
/db_xref="GeneID:7789544"
ncRNA 2541..2608
/locus_tag="NGR_b00040"
/ncRNA_class="antisense_RNA"
/product="negative antisense RNA regulator of RepC"
/note="S-element, RF00490"
/db_xref="GeneID:7789544"
gene 2606..3919
/gene="repC"
/locus_tag="NGR_b00050"
/db_xref="GeneID:7789545"
CDS 2606..3919
/gene="repC"
/locus_tag="NGR_b00050"
/codon_start=1
/transl_table=11
/product="replication initiation protein RepC"
/protein_id="YP_002822232.1"
/db_xref="GI:227818261"
/db_xref="GeneID:7789545"
/translation="MERGNVTTPFGRRAMTLGMLARQIAAGDIPPKQSVDKWKLFRTV
CEAKSAIGVSDRSLAVLNALLSFYPGAELSSENGLVVFPSNAQLSLRTHGMAGTTLRR
HLACLVEAGLIVRRDSPNGKRYARKSRNGAIGEAFGFDLSPLLARTEEFRAAAAKLAA
EKQHLRLVRERLSLCRRDIAKLLDLSRQSNPDADCQAFESAFGQLNAGLPRNAPVGFL
EALLEKLGKLREQLTNRLEILLNSQKTATNDHQNGRHKQNSNPDFQFESEPGLGKDGE
VSLADDCSRTESAGRTGKPHQQRPDETSSRLPDSVSPAPPVDRLRRQIPLPAVLQACP
QIADYGPSGRVANWKDLMTAAIVVRTMLNVSADAFEDACLVLGYENAATLMACILERA
DRINSPGGYLRDLTQRARQQAFSLAPMVGALSQARRQGLRGSQSA"
misc_feature 2606..3907
/gene="repC"
/locus_tag="NGR_b00050"
/note="replication initiation protein RepC; Provisional;
Region: PRK13824"
/db_xref="CDD:184349"
misc_feature 2642..3157
/gene="repC"
/locus_tag="NGR_b00050"
/note="Replication protein C N-terminal domain; Region:
RP-C; pfam03428"
/db_xref="CDD:146192"
misc_feature 3182..3892
/gene="repC"
/locus_tag="NGR_b00050"
/note="Replication protein C C-terminal region; Region:
RP-C_C; pfam11800"
/db_xref="CDD:152236"
gene 4178..5389
/locus_tag="NGR_b00060"
/db_xref="GeneID:7789546"
CDS 4178..5389
/locus_tag="NGR_b00060"
/codon_start=1
/transl_table=11
/product="polysaccharide biosynthesis protein"
/protein_id="YP_002822233.1"
/db_xref="GI:227818262"
/db_xref="GeneID:7789546"
/translation="MRLILVNDVSIIRGGATKVALQCIDASRQAGLNCAILVGDDGEG
LMPRFAGIRTVALGQRPLRDGPTFTDVFEKNYNQHAYDALDGLLKETDEETVVHVHGW
SQILSPSIFYALAKHKAKVIVTAHDFFLSCPNGGLINFQSGAVCDVRPMSAACLTTNC
DKRNYLHKLWRFRRTLTQRGVGEEFWSRVGIVLAHESMEPFLHSGPLQHFITLRTPTE
PLTHTPVEAWRNHRTLFLGRMCWEKGVRTLADALNKTGRTATLIGRGPLLDEMQRALP
HCWVPGWLADEEVTTLAGQARVFIMPSRMPEPYGLVAAEALMSGIPVIISSNALIAAE
VERYDAGLVFRSGDAGSLAESLASTDDDRLMQRLCEGALGLGQRIAPSKAEWGRRMVD
IYTGRSGLFAQ"
misc_feature 4178..5293
/locus_tag="NGR_b00060"
/note="This family is most closely related to the GT1
family of glycosyltransferases and named after YqgM in
Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to...; Region:
GT1_YqgM_like; cd03801"
/db_xref="CDD:99974"
misc_feature 4352..5293
/locus_tag="NGR_b00060"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
gene 5404..6384
/locus_tag="NGR_b00070"
/db_xref="GeneID:7789547"
CDS 5404..6384
/locus_tag="NGR_b00070"
/codon_start=1
/transl_table=11
/product="NAD-dependent epimerase/dehydratase"
/protein_id="YP_002822234.1"
/db_xref="GI:227818263"
/db_xref="GeneID:7789547"
/translation="MARALVTGGCGFVGRHLIKRLLTEGLDVVCVDPLVEGTGARHPD
LWQRFPGSRFAFFEEDCRSFFFRPLEHFDYVFHLAALVGGRVTLEARTLDVAEDLAVD
AELWKWAARAKPGCVVFFSSSAAYPVSLQTLANHRLLSEDMISFEAAIGVPDLSYGWA
KLTGEYLMKLYVERYGNRAVAYRPFSGYGEDQDLAYPFPAICRRLLDERGAAEVCVWG
SGRQCRDFIHIDDCIDFIWQTKELLPDGASLNLSTGRATSFMKLAEIIARQIGWNPVV
NGLRDRPEGVFYRCGDTALQRSYGLAPRVSLEEGIARMLDHLRMEFDTCS"
misc_feature 5410..6372
/locus_tag="NGR_b00070"
/note="Nucleoside-diphosphate-sugar epimerases [Cell
envelope biogenesis, outer membrane / Carbohydrate
transport and metabolism]; Region: WcaG; COG0451"
/db_xref="CDD:30800"
misc_feature 5410..6354
/locus_tag="NGR_b00070"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(5425..5427,5431..5436,5440..5442,5497..5505,
5635..5643,5761..5769,5872..5874,5884..5886,5953..5964)
/locus_tag="NGR_b00070"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(5707..5709,5767..5769,5872..5874,5884..5886)
/locus_tag="NGR_b00070"
/note="active site"
/db_xref="CDD:187535"
gene complement(6983..7819)
/locus_tag="NGR_b00080"
/db_xref="GeneID:7789548"
CDS complement(6983..7819)
/locus_tag="NGR_b00080"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822235.1"
/db_xref="GI:227818264"
/db_xref="GeneID:7789548"
/translation="MASVLAASGGVKQVICISWGTKYGAPFINRLYAMVARNITPPFT
FTCFTDSRENLRPEILCEDLPPLDVEMPTNTKGIWPKARLWGPKLGNLKGPVLFLDLD
VVIVGSLDSFFEAGGPDDVVLAVNQTTPFERLGQTSVFRFPVGKLVPLQEKFRTDPQG
VADEYRFEQRFVTRNAPGGAKFFPRRHVLHFRQDCRWPFPLNYYLAPRLPADARIVLF
PRGLLPQHAIDGQFGYKGRAATPLGHVRGLFSPERRERNPFRYLRHYIRPTGWVAEHW
RE"
gene 8316..9518
/locus_tag="NGR_b00090"
/db_xref="GeneID:7789549"
CDS 8316..9518
/locus_tag="NGR_b00090"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822236.1"
/db_xref="GI:227818265"
/db_xref="GeneID:7789549"
/translation="MLASVSAKGFIFIMRYETPDPLHPALLPGLIAAEDGLARLDERA
ARHAVAEGFRERGQFFDAAAALWVAGELVHVEDLVLHDSHMDARAPSHELTIAHAVLR
ARRRLDLAEPGWALSLSGLNALRGEQGAVPANGGRSEAPDHPPDREEAGEAAVDGEDN
PLANEFAELDAAMARSQQLLDFHAGSLAEAASPLSAERMAPERTAEPTGQLGLLFDED
WDEAARLDAWRGVLAAADQLPACLGAAVLFDAWERIEPLRRQHWLGSLLVGAYLRCRG
KVASHVLGFNTGLKTIRHERRRSKDRSARLNAFLEAMAVTADLGLKELDRLSLSRTQM
EMRIKDRRSNSNLPGLIDLVLSRPIVSTAMIARHLGVTPRGALNLVRELGVREITGRG
RYRGWGVI"
misc_feature 8949..9335
/locus_tag="NGR_b00090"
/note="Protein of unknown function (DUF1612); Region:
DUF1612; pfam07756"
/db_xref="CDD:149040"
misc_feature 9354..9515
/locus_tag="NGR_b00090"
/note="HTH DNA binding domain; Region: HTH_13; pfam11972"
/db_xref="CDD:152407"
gene complement(9548..10048)
/locus_tag="NGR_b00100"
/db_xref="GeneID:7789550"
CDS complement(9548..10048)
/locus_tag="NGR_b00100"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822237.1"
/db_xref="GI:227818266"
/db_xref="GeneID:7789550"
/translation="MTRHLLVAAMLLLFAGTAQADESAFLGSLEGQWTGGGMVRVRVD
RTPINVSCNFDSQATDAALSMRGTCRGLIVVSRSIGADLQFTGVNYSGTYVGPSGRKS
TLTGKRRGSAINLTIHWAREVNGDRRANLTLQKVGENGMKLMTVDVDPRSGNRVVTSE
INLQRK"
gene complement(10347..11210)
/locus_tag="NGR_b00110"
/db_xref="GeneID:7789551"
CDS complement(10347..11210)
/locus_tag="NGR_b00110"
/codon_start=1
/transl_table=11
/product="transmembrane protein"
/protein_id="YP_002822238.1"
/db_xref="GI:227818267"
/db_xref="GeneID:7789551"
/translation="MDRITSGWMNGMAGVLIFSGSLPATRIAVMDFDPVFLTVARATI
AGLLAFCLLVVFREKRPERGDLLPLAIVSLGVVVGFPLLTALALRHVTSAHSIVFVGL
LPLATAIFGVLRGGERPKPAFWLFSGLGSTIVVGFALRQGFAASPVGDLLMLAAILAC
GLGYAEGAKLSRKLGGWQVISWALVLSLPVMLGLALATMPVSFDALRPASWFGLGYVS
VFSMLIGFIFWYRGLAQGGIVAVGQLQLLQPFFGLALAATLLDETVSWPMLAATLAIV
ACVAGAKKFAS"
misc_feature complement(10821..11165)
/locus_tag="NGR_b00110"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:144477"
gene 11328..12725
/locus_tag="NGR_b00120"
/db_xref="GeneID:7789552"
CDS 11328..12725
/locus_tag="NGR_b00120"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_002822239.1"
/db_xref="GI:227818268"
/db_xref="GeneID:7789552"
/translation="MRPQSADADGETLIARVMATVRNRISGRTLTPGARLPSIRASAT
SLKVSKSTVVEAYERLAAEGLIRSRPGSGFFVAAPLAPLSLAEIGPRVEREVDPLWIS
RQALEADGNVLKPGCGWLPASWMPEEGLRRALRAVARGRAATLVEYGPPLGLLALRQL
LARRLAQHGIEASPEQVMLTESGTQAIDLLCRFLVEPGEAVLVDDPCYFNFHALLRAH
QAKIVGIPYTPAGPDIDRFAAALQEHRPRLYITNSALHNPTGATLSPLVAHRLLKLAE
QFGLTIVEDDIFADFEEAAAPRLAAFDGLERVVHIGSFSKSLSAAVRCGFIAAPRGWI
EPLTDLKIATSFGAAGFSAELVLTLLKDGSYRKHMETVRQRLSRAMAGTIARLRQIGI
EPWIEPQAGMFVWCRLPDGIDAAQLARRALAENIVLAPGNVFSQAQTAGNFLRFNVAQ
CEDERLFRELAGLMR"
misc_feature 11355..12722
/locus_tag="NGR_b00120"
/note="Transcriptional regulators containing a DNA-binding
HTH domain and an aminotransferase domain (MocR family)
and their eukaryotic orthologs [Transcription / Amino acid
transport and metabolism]; Region: ARO8; COG1167"
/db_xref="CDD:31361"
misc_feature 11361..11558
/locus_tag="NGR_b00120"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature order(11361..11363,11367..11369,11436..11438,11442..11447,
11469..11483,11487..11492,11499..11501,11529..11534,
11538..11549)
/locus_tag="NGR_b00120"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature 11829..12710
/locus_tag="NGR_b00120"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature order(11871..11879,11949..11951,12096..12098,12189..12191,
12264..12266,12270..12275,12294..12296)
/locus_tag="NGR_b00120"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature order(11880..11882,11979..11981,12168..12170,12288..12296,
12381..12383,12390..12392)
/locus_tag="NGR_b00120"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature 12273..12275
/locus_tag="NGR_b00120"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene complement(12791..13690)
/locus_tag="NGR_b00130"
/db_xref="GeneID:7789553"
CDS complement(12791..13690)
/locus_tag="NGR_b00130"
/note="specific inhibitor of chromosomal initiation of
replication in vitro; binds the three 13-mers in the
origin (oriC) to block initiation of replication; also
controls genes involved in arginine transport"
/codon_start=1
/transl_table=11
/product="chromosome replication initiation inhibitor
protein"
/protein_id="YP_002822240.1"
/db_xref="GI:227818269"
/db_xref="GeneID:7789553"
/translation="MLDYSALRAVSAVVQTGSFEKAAAMLNVTPSAVSQRVKQLEERL
GTVLIARGNPCTATEKGAWLCRHMETVGMLESELFEHLPALTDPGEPKQRVTLHVATS
ADSLGTWFVAAISRFAKGSDYLLNIALDDEDHTAEWLRRGRVIAAVTSLEKPIQGCRR
LSLGALRYHATASPDFVARHFADGVTPESIANAPALTFNQKDRLQSRWIRQALGKDLA
YPTHWLPSTQSFLDASLSGMGWCMNPTQLARQHLDAGRLVELIPDTPLDVPLYWQMNR
LAADRLADFTREVTTVAREQLLR"
misc_feature complement(12800..13690)
/locus_tag="NGR_b00130"
/note="chromosome replication initiation inhibitor
protein; Validated; Region: PRK03635"
/db_xref="CDD:179616"
misc_feature complement(13508..13675)
/locus_tag="NGR_b00130"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(12824..13405)
/locus_tag="NGR_b00130"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature complement(order(12983..12988,12992..12997,13013..13030,
13298..13318,13325..13327,13337..13339,13346..13351,
13355..13360))
/locus_tag="NGR_b00130"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 13793..14401
/locus_tag="NGR_b00140"
/db_xref="GeneID:7789554"
CDS 13793..14401
/locus_tag="NGR_b00140"
/codon_start=1
/transl_table=11
/product="amino acid efflux protein, LysE family"
/protein_id="YP_002822241.1"
/db_xref="GI:227818270"
/db_xref="GeneID:7789554"
/translation="MSFSIYVTGLMMGLSLIVAIGAQNAFVLRQGLRNEHLFAVCLAC
GLSDTLLIVLGVTSFQHIAALLPWLDPVMRYGGAAFLIWYGAKNLYSALRSSGALAAP
EARPSSFRQTLATCLALTWLNPHVYLDTVVLLGTISTRFPGQEFSFTTGAVTASFLFF
FGLGYGATWLRPIFLKPTAWRVLETLIAFTMWMIASKLLRGA"
misc_feature 13799..14392
/locus_tag="NGR_b00140"
/note="Lysine efflux permease [General function prediction
only]; Region: COG1279"
/db_xref="CDD:31470"
gene 14458..15093
/locus_tag="NGR_b00150"
/db_xref="GeneID:7789555"
CDS 14458..15093
/locus_tag="NGR_b00150"
/codon_start=1
/transl_table=11
/product="threonine efflux protein"
/protein_id="YP_002822242.1"
/db_xref="GI:227818271"
/db_xref="GeneID:7789555"
/translation="MLAELNHLLLVYTAYVIAAGSPGPSNMRIMGVAMNNGRRAALVL
AAGVVSGSIFWGTMAATGISAILSRYAEALIVLKIFGGLYLLYLAFKAGRAALASDAE
AARTSSGDETLSGAALYRRGLLMHLTNPKSVLAWIALVTLGLGPGSSWHTLAAILAGC
AVLSVTIFCGYAIIFSTAPMVRLYRRTRRWIEAILAVFFGVAGLRLLLSRA"
misc_feature 14518..15075
/locus_tag="NGR_b00150"
/note="LysE type translocator; Region: LysE; cl00565"
/db_xref="CDD:207111"
gene 15104..15997
/locus_tag="NGR_b00160"
/db_xref="GeneID:7789556"
CDS 15104..15997
/locus_tag="NGR_b00160"
/codon_start=1
/transl_table=11
/product="dihydrodipicolinate synthetase"
/protein_id="YP_002822243.1"
/db_xref="GI:227818272"
/db_xref="GeneID:7789556"
/translation="MTLFTGLAAFPITPTDASGHVDTAALARLLERIRLAGADSIGLL
GSTGGYAFLSRDERRCAVEAAMACVGGRIPVIVGVGALRTDDAQALARDARAAGADGL
LLAPMSYTPLLDEEVYQHFAAVADAGDLPLSIYNNPGTTRFTFSNALIGRLSKVAKVA
AVKMPLPPDGDFKGEMARLRTETAPGFSIGYSGDWGAAAALLSGCDAWYSVVAGLLPA
EAMALTRAARAGDLSEVERLDRAFQPLWSLFKAFGSFRVMYAIAEALGLCRAEPPRPI
LPLPSTEIPRVRSALDRVLLK"
misc_feature 15104..15976
/locus_tag="NGR_b00160"
/note="Dihydrodipicolinate synthase/N-acetylneuraminate
lyase [Amino acid transport and metabolism / Cell envelope
biogenesis, outer membrane]; Region: DapA; COG0329"
/db_xref="CDD:30677"
misc_feature 15128..15976
/locus_tag="NGR_b00160"
/note="Dihydrodipicolinate synthase family; Region:
DHDPS-like; cd00408"
/db_xref="CDD:188630"
misc_feature order(15131..15133,15227..15229,15236..15244,15506..15508,
15590..15592)
/locus_tag="NGR_b00160"
/note="inhibitor site; inhibition site"
/db_xref="CDD:188630"
misc_feature order(15227..15229,15236..15244,15506..15508,15590..15592,
15728..15730)
/locus_tag="NGR_b00160"
/note="active site"
/db_xref="CDD:188630"
misc_feature order(15239..15241,15254..15259,15350..15355,15425..15430,
15449..15451,15461..15463,15923..15928)
/locus_tag="NGR_b00160"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:188630"
misc_feature 15590..15592
/locus_tag="NGR_b00160"
/note="catalytic residue [active]"
/db_xref="CDD:188630"
gene complement(15963..17291)
/locus_tag="NGR_b00170"
/db_xref="GeneID:7789557"
CDS complement(15963..17291)
/locus_tag="NGR_b00170"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822244.1"
/db_xref="GI:227818273"
/db_xref="GeneID:7789557"
/translation="MDFVEALNAAASWLQTFLINEWTLYQSALIVVGYFVCGLLAKRL
EPALEARARMIKGNPDLLRVIIAFMRRLKWLFLIVWLWIADVVLSRYGWPSYRWLVAT
ALTLVAAWFIIAVLTRIIRNQTLARVVAVIGWLYFALYALGLDRPVLTALDSLAVNLG
AVRLSMLLVLKAILLSAAMIWLAVLFGNMSSNWVQKSADLTPSLKVLISKLIKIGLIM
LAGTIALSATGIDLTALTVFSGAVGVGIGFGLQKVVSNFISGIIILLDKSIKPGDTIT
LGETFGSVRDLRSRFVSVITRDGKEYLIPNEDFISKQVVNWSFSSDYVRIDVGFETSP
SSDPHEVARLAIETAKTVPRVASAYAEPVCWLTGFGGSSLGFKLRFWISDPSNGLTNI
RGQVFMALWDAFDAAGISMPDPREIIMKTPAELAGAEEPATSTRRDRARF"
misc_feature complement(15999..16910)
/locus_tag="NGR_b00170"
/note="Small-conductance mechanosensitive channel [Cell
envelope biogenesis, outer membrane]; Region: MscS;
COG0668"
/db_xref="CDD:31012"
misc_feature complement(16059..16661)
/locus_tag="NGR_b00170"
/note="Mechanosensitive ion channel; Region: MS_channel;
pfam00924"
/db_xref="CDD:201506"
gene 17622..18092
/locus_tag="NGR_b00180"
/db_xref="GeneID:7789558"
CDS 17622..18092
/locus_tag="NGR_b00180"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822245.1"
/db_xref="GI:227818274"
/db_xref="GeneID:7789558"
/translation="MRIVSLSAVVCIGLCGIASFASAEDAHTIIAPDDVKWAPAPKIL
PAGAETAVLFGDPSKEGLFALRLKVPSGYAVPPHTHPADEVVTVISGTINLGMGETAD
RSASKALSAGSFFALPPGMAHFAYFDEETVVQITTNGPWGIKYVNPADDPQKSQ"
misc_feature 17802..>18026
/locus_tag="NGR_b00180"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:212615"
gene complement(18196..20085)
/locus_tag="NGR_b00190"
/db_xref="GeneID:7789559"
CDS complement(18196..20085)
/locus_tag="NGR_b00190"
/codon_start=1
/transl_table=11
/product="4-hydroxyphenylpyruvate dioxygenase"
/protein_id="YP_002822246.1"
/db_xref="GI:227818275"
/db_xref="GeneID:7789559"
/translation="MKTSIATVSLSGDLSDKLRAIAKAGFDGVEIFENDFLAFDESPR
EVGRMVRDFGLEISLFQPFRDFEGMPEPLRTRTFDRAERKFDLMQELGTDLVLVCSNV
SPAALGGIDRTAADFRELGERAAKRGLRVGYEALAWGRHISDHRDAWEIVRRADHPNI
GLILDSFHTLSRKIEVNSIRSIPKEKIFIVQLADAPLIDMDLLYWSRHFRNMPGEGDL
PVTDFTRAVAATGYDGYLSLEIFNDQFRGGNANAIAVDGYRSLIYLGDQVKRAEPGIR
LPVPAMPPRVDVKGVAFVEFTASEEEAVELEALIRTIGFRRAARHRTKQVLVYRQGAI
NLVINTEREGFASASYLVHGTSAYAFGLMVDDAAATAERARALGAEPFEQAVGPGELM
VPAIRGVGGGLIYFLDEKSDLSKIWEIEFEPVTDDDTAAPAGLTVIDHVAQTVKYEEL
LTWLLFYTSLLDTRKTPMVDIIDPAGIVRSQVVENDAGTLRLTLNGAENRNTLAGRFI
AETFGSGVQHLAFATDDIFATAAALRANGFRALPISPNYYDDVEARFGLEADLVERLK
AENILYDRDEGGEFFQLYSPTYGEGFFFEIIERRGYRGYGAANAIFRIAALKKHLRPE
GMPKG"
misc_feature complement(19303..20085)
/locus_tag="NGR_b00190"
/note="Sugar phosphate isomerases/epimerases [Carbohydrate
transport and metabolism]; Region: IolE; COG1082"
/db_xref="CDD:31279"
misc_feature complement(18817..19158)
/locus_tag="NGR_b00190"
/note="N-terminal domain of 4-hydroxyphenylpyruvate
dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS);
Region: HPPD_N_like; cd08342"
/db_xref="CDD:176690"
misc_feature complement(18238..18783)
/locus_tag="NGR_b00190"
/note="This domain superfamily is found in a variety of
structurally related metalloproteins, including the type I
extradiol dioxygenases, glyoxalase I and a group of
antibiotic resistance proteins; Region: Glo_EDI_BRP_like;
cl14632"
/db_xref="CDD:211465"
misc_feature complement(order(18301..18303,18307..18309,18334..18336,
18532..18534,18601..18603,18607..18609,18646..18648,
18754..18756,18766..18768))
/locus_tag="NGR_b00190"
/note="active site"
/db_xref="CDD:211348"
misc_feature complement(order(18301..18303,18532..18534,18766..18768))
/locus_tag="NGR_b00190"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:211348"
gene complement(20326..21201)
/locus_tag="NGR_b00200"
/db_xref="GeneID:7789560"
CDS complement(20326..21201)
/locus_tag="NGR_b00200"
/note="AroE; catalyzes the conversion of shikimate to
3-dehydroshikimate"
/codon_start=1
/transl_table=11
/product="shikimate 5-dehydrogenase"
/protein_id="YP_002822247.1"
/db_xref="GI:227818276"
/db_xref="GeneID:7789560"
/translation="MRAENMAETLVRPLKAGLIGAGIQASLTPAMHMAEGAAQGLSYE
YELIDLQALGATEDDLPRLLAEAEARGLAGLNITHPCKQAVIAHLDELAPDARRLGAV
NTVVLKGGRRYGHNTDWWGFAEGFKRGLPGADLSSAVQLGAGGAGVATAYAGLSLGLR
RLAVFDREPERAEALAEMLAPLFPEADIAAGTDLAAAMLDAAGVIHATPTGMAKYPGL
PLDAELLAPHHWVAEIVYFPLETALLKEAKRRGCRTLDGGGMAVFQAVGAFRLFTGLE
PDAGRMLEHFKAMTG"
misc_feature complement(20329..21177)
/locus_tag="NGR_b00200"
/note="shikimate 5-dehydrogenase; Reviewed; Region:
PRK12549"
/db_xref="CDD:183586"
misc_feature complement(20887..21150)
/locus_tag="NGR_b00200"
/note="Shikimate dehydrogenase substrate binding domain;
Region: Shikimate_dh_N; pfam08501"
/db_xref="CDD:149523"
misc_feature complement(20380..20853)
/locus_tag="NGR_b00200"
/note="NAD(P) binding domain of Shikimate dehydrogenase;
Region: NAD_bind_Shikimate_DH; cd01065"
/db_xref="CDD:133443"
misc_feature complement(order(20410..20412,20419..20421,20494..20496,
20848..20850))
/locus_tag="NGR_b00200"
/note="shikimate binding site; other site"
/db_xref="CDD:133443"
misc_feature complement(order(20419..20424,20431..20433,20500..20502,
20575..20583,20701..20706,20764..20766,20773..20775))
/locus_tag="NGR_b00200"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:133443"
gene complement(21269..22282)
/locus_tag="NGR_b00210"
/db_xref="GeneID:7789561"
CDS complement(21269..22282)
/locus_tag="NGR_b00210"
/codon_start=1
/transl_table=11
/product="extracytoplasmic solute receptor of
TRAP-transport system"
/protein_id="YP_002822248.1"
/db_xref="GI:227818277"
/db_xref="GeneID:7789561"
/translation="MLKFTKLALGLALPLALLTAGPTNAEIGEHTLKFASANNKGHPQ
VTGMEKFAELVKEKSGGKIEVKLFPGGTLGGDVQTISALQGGVIEMTVLNAGILSNNV
KQFGAVDLPFLFNSGEEADKVMDGPFGESLLKLLPDTGLVGLGYWELGFRNLTNNRHA
VTKLEDIKGLKIRTIQSPIPLELFNTLGANAVPLPYTELYTALETGTVDGQENPAANI
LNAKFYEVQKYMTLTRHQYNPQIVLVSKKFWDGLNDEEKAVLQSAATEARDFQRKVSR
EKDAEALEEIKKTGMEVSELSPEETQKLRDAVKPVIEKFSAEIGADTVQALFKEIGAA
RGQ"
misc_feature complement(21302..22213)
/locus_tag="NGR_b00210"
/note="TRAP-type C4-dicarboxylate transport system,
periplasmic component [Carbohydrate transport and
metabolism]; Region: DctP; COG1638"
/db_xref="CDD:31825"
misc_feature complement(21329..22183)
/locus_tag="NGR_b00210"
/note="Bacterial extracellular solute-binding protein,
family 7; Region: SBP_bac_7; pfam03480"
/db_xref="CDD:202660"
gene complement(22345..23625)
/locus_tag="NGR_b00220"
/db_xref="GeneID:7789562"
CDS complement(22345..23625)
/locus_tag="NGR_b00220"
/codon_start=1
/transl_table=11
/product="large transmembrane subunit, TRAP-transport
system"
/protein_id="YP_002822249.1"
/db_xref="GI:227818278"
/db_xref="GeneID:7789562"
/translation="MTVSIFIGALLGPMALGVPIAFALILSGVALMLYLGLFDAQIVA
QNVLNGADSFPLMAVPFFLLAGEVMNTGGLSRRIVALAMAMVGHIRGGLGFVAIFAAC
ILSSLSGSAVADAAALGALLLPMMLKSGHDAARAGGLLASASIIGPIIPPSIGFILYG
VVGGVSITKLFLAGIFPGLMIAAALCITWFLVARKEQFELPPKESGAVRLKALADSIW
ALMLPVIIIVGLKFGVFTPTEAGVVAAVYSLFVAMVVYRELPPAQLFHVFVAAAKITA
VVMFLVACAAVSAWLITVADVPGALAALVEPLMDNQTLLLIAIMALVVVVGTAMDMTP
TILVMTPVLMPIIKQAGIDPVYFGVLFIINNSIGLITPPVGTVLNVICGVSKLSMEDL
MKGVMPFLIAELIVLFLLVLFPELVTVPVSWFGH"
misc_feature complement(22429..23625)
/locus_tag="NGR_b00220"
/note="Anion permease ArsB/NhaD. These permeases have
been shown to translocate sodium, arsenate, antimonite,
sulfate and organic anions across biological membranes in
all three kingdoms of life. A typical anion permease
contains 8-13 transmembrane helices...; Region:
ArsB_NhaD_permease; cl15356"
/db_xref="CDD:213135"
misc_feature complement(22429..23607)
/locus_tag="NGR_b00220"
/note="DctM-like transporters; Region: DctM; pfam06808"
/db_xref="CDD:148424"
gene complement(23636..24199)
/locus_tag="NGR_b00230"
/db_xref="GeneID:7789563"
CDS complement(23636..24199)
/locus_tag="NGR_b00230"
/codon_start=1
/transl_table=11
/product="small transmembrane subunit, TRAP-transport
system"
/protein_id="YP_002822250.1"
/db_xref="GI:227818279"
/db_xref="GeneID:7789563"
/translation="MTRIIDFYFFALKVTIALLLAGMVVLVFGNVVLRYAFNQGITVS
EELSRIFFVWLTFLGAVVAMREHGHLGVDTLIKRLPPLGAKVAVLIGHVLMLYATWLM
ISGSWAQTLINLHVGAPATGLSMGFFYGAGLAFGIPAFLILLSDAFAIATGRIDVTTA
ELVRDSEDEVALDEIPSPALGPVSAKH"
misc_feature complement(23675..24199)
/locus_tag="NGR_b00230"
/note="TRAP-type C4-dicarboxylate transport system, small
permease component [Carbohydrate transport and
metabolism]; Region: DctM; COG3090"
/db_xref="CDD:32904"
gene 24593..25258
/locus_tag="NGR_b00240"
/db_xref="GeneID:7789564"
CDS 24593..25258
/locus_tag="NGR_b00240"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_002822251.1"
/db_xref="GI:227818280"
/db_xref="GeneID:7789564"
/translation="MAERQMNGRKNDPARTQEDILEVATEEFSTHGLAGARVDQIAER
TRTSKRMIYYYFGSKEALYLAVLERSYRKIRTLEADLELANLPPEQALRTLIATTFDH
DEANPDFVRLVSIENIHHAAHMLRSEAIRELNVSVIQTIDAIVQRGLADGTFRRRADP
IDIHMLISAFCFFRVSNRYTFGTIFRRDLSEPATIGRHRTMIADAVVSYLKEEEGGGR
GGR"
misc_feature 24599..>25093
/locus_tag="NGR_b00240"
/note="pyrimidine utilization regulatory protein R;
Region: RutR; TIGR03613"
/db_xref="CDD:200300"
misc_feature 24650..24790
/locus_tag="NGR_b00240"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene complement(25347..25841)
/locus_tag="NGR_b00250"
/db_xref="GeneID:7789565"
CDS complement(25347..25841)
/locus_tag="NGR_b00250"
/codon_start=1
/transl_table=11
/product="cytidine/deoxycytidylate deaminase family
protein"
/protein_id="YP_002822252.1"
/db_xref="GI:227818281"
/db_xref="GeneID:7789565"
/translation="MPGTKRPYDESLLRKAFDVARRSREGGDHPFGSILADRDGNVLL
EQCNGYSSEGGDRTAHAERLLATRAGKSYDLDFLAECTMYTSAEPCAMCSGAIYWAGI
GRVVFGLSEREMKQQIGDSKENPTLDLPCDIVFAAGQRPTEVVGPMLADEAAKLHKEY
WSRR"
misc_feature complement(25509..25805)
/locus_tag="NGR_b00250"
/note="Nucleoside deaminases include adenosine, guanine
and cytosine deaminases. These enzymes are Zn dependent
and catalyze the deamination of nucleosides. The zinc ion
in the active site plays a central role in the proposed
catalytic mechanism, activating a...; Region:
nucleoside_deaminase; cd01285"
/db_xref="CDD:29828"
misc_feature complement(order(25563..25565,25572..25574,25656..25664,
25698..25700,25749..25751))
/locus_tag="NGR_b00250"
/note="nucleoside/Zn binding site; other site"
/db_xref="CDD:29828"
misc_feature complement(order(25542..25547,25554..25559,25566..25571,
25641..25643,25653..25655,25668..25670))
/locus_tag="NGR_b00250"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29828"
misc_feature complement(order(25563..25565,25572..25577,25656..25664))
/locus_tag="NGR_b00250"
/note="catalytic motif [active]"
/db_xref="CDD:29828"
gene complement(26074..26880)
/locus_tag="NGR_b00260"
/db_xref="GeneID:7789566"
CDS complement(26074..26880)
/locus_tag="NGR_b00260"
/note="similar to carboxyvinyl-carboxyphosphonate
phosphorylmutase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822253.1"
/db_xref="GI:227818282"
/db_xref="GeneID:7789566"
/translation="MDDKHTLFRKLHDDPGTFIIPNPWDTGTARILAAFPALATTSAG
MAFSLGLPEGRASREQTLAHCRSIVDATPLPVSADLEKGFGDDPESAAETVVAAAGIG
LAGCSLEDHTGDRARPIFDFGLAVERIEAAAQACRSLPHDFLLTARCENFLWGHTDLD
DTIRRLQAFERAGADVLYAPGLPDLDSIRAICEAVTKPVNVVMGMPGLTFGLAELAEA
GAKRISVGSALARLAFGAVVDAAREMRSQGTFRFSEKAMGFAELEGFFRN"
misc_feature complement(26146..26859)
/locus_tag="NGR_b00260"
/note="Phosphoenolpyruvate phosphomutase; Region:
PEP_mutase; pfam13714"
/db_xref="CDD:205889"
misc_feature complement(26152..26859)
/locus_tag="NGR_b00260"
/note="Members of the ICL/PEPM enzyme family catalyze
either P-C or C-C bond formation/cleavage. Known members
are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate
hydrolase (PPH), carboxyPEP mutase (CPEP mutase),
oxaloacetate hydrolase (OAH), isocitrate...; Region:
ICL_PEPM; cd00377"
/db_xref="CDD:119340"
misc_feature complement(order(26155..26163,26167..26175,26179..26187,
26479..26481,26488..26493,26500..26502,26509..26514,
26581..26583,26590..26592,26602..26607,26626..26628,
26668..26673,26680..26685,26689..26694,26701..26706,
26710..26721,26725..26730,26737..26742,26752..26754,
26773..26778,26779..26781,26788..26793,26797..26811,
26815..26826,26830..26832,26851..26853))
/locus_tag="NGR_b00260"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:119340"
misc_feature complement(order(26203..26205,26269..26271,26275..26277,
26341..26343,26437..26439,26554..26556,26638..26640,
26644..26646,26752..26760,26764..26766))
/locus_tag="NGR_b00260"
/note="active site"
/db_xref="CDD:119340"
misc_feature complement(order(26554..26556,26638..26640,26644..26646))
/locus_tag="NGR_b00260"
/note="Mg2+/Mn2+ binding site [ion binding]; other site"
/db_xref="CDD:119340"
gene complement(27085..28278)
/locus_tag="NGR_b00270"
/db_xref="GeneID:7789567"
CDS complement(27085..28278)
/locus_tag="NGR_b00270"
/note="related to major facilitator superfamily"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="YP_002822254.1"
/db_xref="GI:227818283"
/db_xref="GeneID:7789567"
/translation="MFCNHAGMTNIDQSISTLSAERARIPPFAFVLTVCIGVIGSNSL
ALGPIAPEVAKALGADVPAVMTASAAFGLGTAASAVFLGRLIDRNGPRRMLAAALLLL
AAGLAGSAFAPALPLLVAAQLVVGIAAGIALPAIYTLASVIAPAGRESETIGLVLTGW
TLSMVAGVPLSAAIADFAGWRAVYLVVAAATLVACAAVRLATVREGPGGKATSPLAAL
GVSGVAPLLIACAAFMAAFYGVYAYIGDHLHAALGLPVSANGLVAVSYGLGFGGAAFL
DRLIDRFGADRLLPLIFLAVAGVYVLMSAASGSYPAMLAVVFLWGLANHFGLNVLIMR
LTGLDPARRGAIMGLNSGVTYLALFAGTLGFGAAYSGTAFYTLPLAAAALMLAAAASA
ALAPR"
misc_feature complement(27214..28233)
/locus_tag="NGR_b00270"
/note="Arabinose efflux permease [Carbohydrate transport
and metabolism]; Region: AraJ; COG2814"
/db_xref="CDD:32643"
misc_feature complement(<27310..28191)
/locus_tag="NGR_b00270"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(27316..27318,27460..27462,27478..27480,
27490..27492,27502..27504,27544..27546,27553..27558,
27565..27570,27577..27579,27787..27789,27805..27810,
27817..27822,27856..27858,27865..27870,27877..27882,
27889..27894,28030..28035,28039..28044,28054..28056,
28063..28068,28075..28077,28126..28131,28135..28143,
28150..28152))
/locus_tag="NGR_b00270"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 28306..28830
/locus_tag="NGR_b00280"
/db_xref="GeneID:7789568"
CDS 28306..28830
/locus_tag="NGR_b00280"
/codon_start=1
/transl_table=11
/product="AsnC family transcriptional regulator"
/protein_id="YP_002822255.1"
/db_xref="GI:227818284"
/db_xref="GeneID:7789568"
/translation="MDQNTDDVRRKRPPERDLDAMDRKLLGVLVEDATTSYAELGERV
GLSPPAAHERVKRLRRSGAIRRVAALIDPEAVGKTLLAFVHVDTTGWGKTQALLAIEE
YPEVEEIHSVAGDTCMLLKVRTESTHALEGLLARLYDTPGVKATRSYVVLSTYLERPV
QPGTTSEWPAVVKS"
misc_feature 28357..28677
/locus_tag="NGR_b00280"
/note="helix_turn_helix ASNC type; Region: HTH_ASNC;
smart00344"
/db_xref="CDD:197668"
misc_feature 28357..28482
/locus_tag="NGR_b00280"
/note="AsnC-type helix-turn-helix domain; Region:
HTH_AsnC-type; pfam13404"
/db_xref="CDD:205582"
misc_feature order(28363..28371,28408..28410,28414..28419,28444..28455,
28459..28464,28471..28476,28480..28485,28501..28503)
/locus_tag="NGR_b00280"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(28408..28410,28420..28422)
/locus_tag="NGR_b00280"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
misc_feature 28555..28767
/locus_tag="NGR_b00280"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:189815"
gene complement(28832..29245)
/locus_tag="NGR_b00290"
/db_xref="GeneID:7789569"
CDS complement(28832..29245)
/locus_tag="NGR_b00290"
/codon_start=1
/transl_table=11
/product="plasmid stability protein"
/protein_id="YP_002822256.1"
/db_xref="GI:227818285"
/db_xref="GeneID:7789569"
/translation="MIFLDTNVISETLRKSPSETVISWLVRHDAEIALPTVTIAEIAY
AIQKIMPDQRAVRLEQALSDWRRRFAGRIFGLMEEAAIAYGEIMGAASRQGSTMSAPD
GMIAAITQVNRGRLATRNIADFRSTGLDLVSPWEF"
misc_feature complement(28850..29236)
/locus_tag="NGR_b00290"
/note="PIN domain of ribonucleases (toxins), VapC and
FitB, of prokaryotic toxin/antitoxin operons, Pyrococcus
horikoshii protein PH0500, and other similar bacterial and
archaeal homologs; Region: PIN_VapC-FitB; cd09881"
/db_xref="CDD:189051"
misc_feature complement(order(28874..28876,28931..28936,28940..28945,
28949..28951,28970..28972,28979..28984,28991..28996,
29000..29002,29015..29023,29027..29029,29051..29053,
29072..29074,29111..29119,29123..29131,29135..29140,
29150..29152,29171..29173,29180..29182,29204..29212,
29216..29221,29228..29236))
/locus_tag="NGR_b00290"
/note="oligomeric interface; other site"
/db_xref="CDD:189051"
misc_feature complement(order(28886..28888,28940..28942,29123..29125,
29231..29233))
/locus_tag="NGR_b00290"
/note="putative active site [active]"
/db_xref="CDD:189051"
misc_feature complement(order(28937..28939,28943..28948,28979..28984,
28988..28996,29000..29005,29018..29020,29045..29047,
29066..29071,29114..29119,29123..29128,29135..29140))
/locus_tag="NGR_b00290"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:189051"
gene complement(29242..29490)
/locus_tag="NGR_b00300"
/db_xref="GeneID:7789570"
CDS complement(29242..29490)
/locus_tag="NGR_b00300"
/codon_start=1
/transl_table=11
/product="plasmid stability protein"
/protein_id="YP_002822257.1"
/db_xref="GI:227818286"
/db_xref="GeneID:7789570"
/translation="MAEPQLSVRSARARDLAHRLARRENRSIADIVERALEAYEIREA
GREPASAFYARLSDSSGSDIDLEAVIREGRRPHKGPEL"
gene 29695..31926
/locus_tag="NGR_b00310"
/db_xref="GeneID:7789571"
CDS 29695..31926
/locus_tag="NGR_b00310"
/codon_start=1
/transl_table=11
/product="adenylate class-3/4/guanylyl cyclase"
/protein_id="YP_002822258.1"
/db_xref="GI:227818287"
/db_xref="GeneID:7789571"
/translation="MERRLAAVMIADVAGYGLLSQADEEGTRVRFQADLHELFEKRIA
AHGGRLIKTMGDGLLIEFHSVVEAVRCAVEVQRAKSENRGVEQNGLEFRIGINLGDVI
VEGDDIQGDGVIIAERLQSRAEPGGIMISGTAFDQVEKHLDVGFDFLGEQRLKHIEKP
VRTYRLLPCETPVGSTKTAVRRRRRRFGVLAACAAVFAVAAGLIWWQPWRQTTQTASI
ARAELALPDKPSIAVLPFANVSDDPRQEYFADGMTDALVTELAQISGLFVIARNSTFT
YKGRAVTAAQVSGELGVRYILEGSVQRAGEQLRINAQLVDAQSGGHAWAGKFDGTLAD
VFALQDDVTRGIAEALALRLQPGEQMALGRKETTVPAAFDAFLRGWEHHRRMTPEDIA
KAVPYFEEAIALDPAYGRAYAAAAMVYARLYAWRWHYHLGMTRFEARAKASKYLRTAQ
RYKTALAHQVAGLLAEADWQHAQALAELKEAIALEPGDSWSYAMMALTLTSVGRPDEA
IPHIRTAIRLDPHYPSFFMYVLGLTEFSMRNYEAAAEAAESSTKLNSGDENSFLLLAA
AAGHLGQRSAAENAVARFNALSVGRGGTVATISTTPPLDLARHEDRQSLLEGLRLAGV
PESLTSGDFTSINKLTAEEVRSLFFGQRLRGRMLDYGEAHEATFSTEGKGTLSGGWAS
IGGGRMSGVEIRFEGDEVCFLWLDTARLCGLVLRNPGGLNAKENEFVWYHGDIAFTFS
QVK"
misc_feature 29704..30195
/locus_tag="NGR_b00310"
/note="Adenylate cyclase, family 3 (some proteins contain
HAMP domain) [Signal transduction mechanisms]; Region:
CyaA; COG2114"
/db_xref="CDD:32297"
misc_feature 29710..30192
/locus_tag="NGR_b00310"
/note="cyclase homology domain; Region: CHD; cd07302"
/db_xref="CDD:143636"
misc_feature order(29722..29724,29728..29745,29848..29850,29854..29862,
29869..29871,30013..30021,30031..30036,30043..30048,
30157..30159)
/locus_tag="NGR_b00310"
/note="nucleotidyl binding site; other site"
/db_xref="CDD:143636"
misc_feature order(29728..29730,29860..29862)
/locus_tag="NGR_b00310"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143636"
misc_feature order(29743..29745,29779..29781,29788..29793,29800..29802,
29812..29814,29848..29853,29998..30000,30007..30009,
30016..30027,30034..30036,30157..30159)
/locus_tag="NGR_b00310"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143636"
misc_feature 30331..30756
/locus_tag="NGR_b00310"
/note="Predicted integral membrane protein [Function
unknown]; Region: COG5616"
/db_xref="CDD:35175"
misc_feature <31150..31359
/locus_tag="NGR_b00310"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(31171..31176,31180..31185,31192..31197,31273..31278,
31288..31293,31300..31305)
/locus_tag="NGR_b00310"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature order(31180..31182,31216..31218,31228..31230,31237..31239,
31285..31287,31321..31323,31333..31335,31342..31344)
/locus_tag="NGR_b00310"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene 32088..33680
/locus_tag="NGR_b00320"
/db_xref="GeneID:7789572"
CDS 32088..33680
/locus_tag="NGR_b00320"
/codon_start=1
/transl_table=11
/product="gamma-glutamyltranspeptidase"
/protein_id="YP_002822259.1"
/db_xref="GI:227818288"
/db_xref="GeneID:7789572"
/translation="MRNFEDPGRSLAVARHGMAATSHPAATLTAIEVLKAGGNAVDAA
VAAVAVQSVVEAGSTGVGGDCFAMIALEGSTDIRAYNGSGRAPAGLTGEALRAEGVEA
IERSTPHAVTVPGAVDAWCRLLRDFGRMPIAEVLQPAIAMAREGYVLTPRVAADLGLQ
RDLLAGDPTARATFLVEGEAPPVGSIQHQPLLADTLDAIAHEGRDAFYGGAVAADMVD
YLRGLGGRHSLEDFGSAQGDYVTPISTTYRGRTVYECPPNGQGVVALLILNILARFSL
SKDPFAIDDLHVLLEATRLAYAARDAMVADPTGSDKAVEHMLSSTLADRLVSAISVDR
IAEPLPSFDTVEHKDTVYLCVVDRDRNAVSFINSIFSAYGSGLMAPRSGVLFHNRGQS
FSLVAGHPNEVGPRKRPMHTIIPGMVAEAGRVVMPFGVMGGHYQAMGHAHLLSRLYDC
GLDLQTAIDLPRLFPLPATATVEAEAAIRTRLGAELERRGFKIESPRIAIGGAQAIRI
DWERGVLIGASDPRKDGMALGY"
misc_feature 32121..33677
/locus_tag="NGR_b00320"
/note="Gamma-glutamyltransferase [Amino acid transport and
metabolism]; Region: Ggt; COG0405"
/db_xref="CDD:30754"
misc_feature 32259..33662
/locus_tag="NGR_b00320"
/note="Gamma-glutamyltranspeptidase; Region:
G_glu_transpept; pfam01019"
/db_xref="CDD:201554"
gene 33913..34467
/gene="recX"
/locus_tag="NGR_b00330"
/db_xref="GeneID:7789573"
CDS 33913..34467
/gene="recX"
/locus_tag="NGR_b00330"
/note="binds RecA and inhibits RecA-mediated DNA strand
exchange and ATP hydrolysis and coprotease activities"
/codon_start=1
/transl_table=11
/product="recombination regulator RecX"
/protein_id="YP_002822260.1"
/db_xref="GI:227818289"
/db_xref="GeneID:7789573"
/translation="MDEETQQSDTPTPRMFAWARNSAIYRLERRMHTEKQLFDAISRK
ARQEFDKISDAQVKALADSAVKFASDNRALDDTAYAEIKARSGMRGGKSKRAIAQNLS
QKGVAKDTVAAAVAEADDLYAALVLARKRAFGPFRKCDSDEKRRSKELSAFARAGFGF
EIGKTVFEMSVDDAEEALAAGRHF"
misc_feature 33934..34434
/gene="recX"
/locus_tag="NGR_b00330"
/note="recombination regulator RecX; Reviewed; Region:
recX; PRK00117"
/db_xref="CDD:178877"
gene complement(34508..34975)
/locus_tag="NGR_b00340"
/db_xref="GeneID:7789574"
CDS complement(34508..34975)
/locus_tag="NGR_b00340"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822261.1"
/db_xref="GI:227818290"
/db_xref="GeneID:7789574"
/translation="MNNELQGRAAHVAAIRESAEEEMSAIGVDAAFIGTLVDTFYGRV
LAHPELGPVFDARLSGRWPEHMEKMKSFWSAIAFRSGAYGGKPVQAHLGVANMTPELF
PKWLELFAATLEDIAPNNEAKVWFMATAERIARSLTLSLFYNPALDDPALRRA"
misc_feature complement(34556..34903)
/locus_tag="NGR_b00340"
/note="Truncated hemoglobins (trHbs) are a family of
oxygen-binding heme proteins found in cyanobacteria,
eubacteria, unicellular eukaryotes, and plants. The
truncated hemoglobins have a characteristic two-over-two
alpha helical folding pattern that is distinct...; Region:
Trunc_globin; cd00454"
/db_xref="CDD:29978"
misc_feature complement(order(34586..34588,34595..34597,34628..34630,
34637..34639,34649..34651,34658..34660,34745..34747,
34754..34759,34856..34858,34865..34870,34880..34885,
34898..34900))
/locus_tag="NGR_b00340"
/note="apolar tunnel; other site"
/db_xref="CDD:29978"
misc_feature complement(order(34565..34567,34577..34579,34661..34663,
34670..34672,34694..34696,34703..34708,34712..34714,
34718..34720,34727..34729,34757..34762,34769..34771,
34781..34783,34814..34819,34853..34855))
/locus_tag="NGR_b00340"
/note="heme binding site [chemical binding]; other site"
/db_xref="CDD:29978"
misc_feature complement(order(34625..34633,34643..34645,34652..34654,
34835..34840,34847..34849))
/locus_tag="NGR_b00340"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29978"
gene complement(35350..36858)
/locus_tag="NGR_b00350"
/db_xref="GeneID:7789575"
CDS complement(35350..36858)
/locus_tag="NGR_b00350"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822262.1"
/db_xref="GI:227818291"
/db_xref="GeneID:7789575"
/translation="MMDLFSNLALGFATAASPANLLFCLIGVLLGTLIGVLPGIGATA
TIAMLLPITFQLEPVSSLIMLAGIYYGAQYGGSTTAILINMPGESSSAVTAIDGYQMA
RNGRAGTALAVAALGSFFAGTVSTFLVALFAPPLTEIALEFGAAEYFSLMIVGLVSSV
ALAHGSVVKALAMVALGLLLGLVGTDIYTGTPRFTLGIREYADGLNFVALAVGVFGIA
EILRNLESEKTREVLMAKVSELLPTKEDFKRMFAPVVRGTVIGSALGVLPGGGAILAA
FASYTVEKRLSDRPEEFGRGAIAGVAGPESANNAGAQTSFIPLLTLGIPANPVMALMI
GAMIIQGIVPGPNVAVEQPALFWGIIASMWIGNLMLVVLNLPLIGLWVKLLKIPYFVL
FPIIMAFCSIGVYSVNSNVFDLYAVAFFGLIGYLLLKLRCEPAPLLLGFVLGPLLEEN
LRRAMILSRGDPTTFVTRPISAVLLLIAAIVLVVVFLPSVKAKREEVFVEED"
misc_feature complement(35353..36855)
/locus_tag="NGR_b00350"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3333"
/db_xref="CDD:33142"
gene complement(36866..37327)
/locus_tag="NGR_b00360"
/db_xref="GeneID:7789576"
CDS complement(36866..37327)
/locus_tag="NGR_b00360"
/note="similar to transmembrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822263.1"
/db_xref="GI:227818292"
/db_xref="GeneID:7789576"
/translation="MKAISFDATNALCGSILTAVGLFFAWQSFGLELGTAFRMGPGYF
PLLLSVVLTLLGVVILVQSARVNHEPMGPIAIRGMLFILPAPIFFGLTVRGLGFVPAV
FFTALIACFASHRMKPLWALAVSLGLAIFSVAVFSYGLNLPFERFGPWVRF"
misc_feature complement(36896..37300)
/locus_tag="NGR_b00360"
/note="Tripartite tricarboxylate transporter TctB family;
Region: TctB; pfam07331"
/db_xref="CDD:203614"
misc_feature 37580..37658
/note="NGR_b00370; temperature sensor, ROSE, RF00435"
gene complement(37684..38661)
/locus_tag="NGR_b00380"
/db_xref="GeneID:7789577"
CDS complement(37684..38661)
/locus_tag="NGR_b00380"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822264.1"
/db_xref="GI:227818293"
/db_xref="GeneID:7789577"
/translation="MKILNALLGAAAAVSLFAASASAQTYPERSITMVVPFSAGGPTD
TVARLVAESMSKDLGQQIIVENVGGAGGTLGAGRVAQADPDGYTILLHHIGMATSATL
YRKLAYDTLNAFEYVGLVTEVPMTIVARKDFEPTDLKGLIEYAKANKDTVTVANAGIG
AASHLCGMMFMSAIETPLTTVPYKGTGPAMTDLLGGQVDIMCDQTTNTTKQIQGGTIK
AYATTSPKRLKIFPDLPTAEEAGLKGFQVGIWHGVYAPKGTPADVTDRLSKSLQKALK
DENVAARFAELGTEPSSEADATPAALKAKLESEIARWKPVIEAAGQYAD"
misc_feature complement(37690..38592)
/locus_tag="NGR_b00380"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3181"
/db_xref="CDD:32994"
misc_feature complement(37699..38526)
/locus_tag="NGR_b00380"
/note="NMT1-like family; Region: NMT1_2; cl15260"
/db_xref="CDD:212369"
gene complement(38864..39655)
/locus_tag="NGR_b00390"
/db_xref="GeneID:7789578"
CDS complement(38864..39655)
/locus_tag="NGR_b00390"
/codon_start=1
/transl_table=11
/product="ribosomal pseudouridine synthase B"
/protein_id="YP_002822265.1"
/db_xref="GI:227818294"
/db_xref="GeneID:7789578"
/translation="MKQRRPSPDTKRAGTKADDGAAGKRVTLARALSKLGYCSRTQAE
RLIAEGRVSVGGRKTTDLSLWIDIDRDRITVDGTPVAAEARIYLMLNKPRGLVTTRDD
PEGRPTVFDCLGKVDARFMSPVGRLDKASEGLLLFTNDTVLAQRLLDPATHLGKTYHV
QVRGLFDEAAARAMMDGVSEGGEMLKAIDVRRLRSGDKNSWIEVELQEGRNRQIRRML
DALGFECLRLVRVSIGEIRLGDLPKGASRPLSEAEVQYLRRHTGS"
misc_feature complement(38870..39574)
/locus_tag="NGR_b00390"
/note="16S rRNA uridine-516 pseudouridylate synthase and
related pseudouridylate synthases [Translation, ribosomal
structure and biogenesis]; Region: RsuA; COG1187"
/db_xref="CDD:31380"
misc_feature complement(39383..39574)
/locus_tag="NGR_b00390"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:29105"
misc_feature complement(order(39455..39457,39461..39484,39503..39505,
39509..39514,39521..39526,39530..39535,39539..39541))
/locus_tag="NGR_b00390"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:29105"
misc_feature complement(38957..39397)
/locus_tag="NGR_b00390"
/note="Pseudouridine synthases, RsuA subfamily; Region:
PseudoU_synth_RsuA_like; cd02870"
/db_xref="CDD:211347"
misc_feature complement(order(39011..39013,39272..39283))
/locus_tag="NGR_b00390"
/note="active site"
/db_xref="CDD:211347"
gene 39923..41344
/locus_tag="NGR_b00400"
/db_xref="GeneID:7789579"
CDS 39923..41344
/locus_tag="NGR_b00400"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822266.1"
/db_xref="GI:227818295"
/db_xref="GeneID:7789579"
/translation="MHKSVLGGLVALAASSLLQIDGTPLSSAALAQQAAAPSTPAPPA
EQPAAPEPLTDDELEVLVARIALYPDELVALVSAASLFPLQIIEAERFLEARKKNAEL
KPKESWDGSVISLLNYPEIVKMMSEDLEWTQAFGEAIANQQKDVLIAIQQLRDEAVAK
DIIKTDDKMKVVEEGDNIIIQSASPETIYVPQYPPEMLYEPGYMPAPIDYYDDPYPAY
WYPGAAFFAGAVTGAIFGAIVDWDDWGVWGGRWDGDIDVDCNKCFNNIDFDGKLNFND
IDWKNVDRSKLSFDRDQFNKFDRTNIKNNIKARGDNNLRNRAAEINRDRPQARPGGAG
GGQLKDVRKSTLEGLKAQPRRDASARPGTRPGGGQAAARAKAGDLKPSVNRPQGKKSS
VNRPAGKKKMASKAQNRPRKPSGLGNVNSGRREVASSRRGGHSMGGGHRGGGRPQMSR
GGGGRPPMGRGGGGRGGGRGGRR"
misc_feature 40085..>40531
/locus_tag="NGR_b00400"
/note="Protein of unknown function (DUF3300); Region:
DUF3300; pfam11737"
/db_xref="CDD:152173"
gene 41366..42331
/locus_tag="NGR_b00410"
/db_xref="GeneID:7789580"
CDS 41366..42331
/locus_tag="NGR_b00410"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822267.1"
/db_xref="GI:227818296"
/db_xref="GeneID:7789580"
/translation="MSKLFHPLLLGPVLPGLAIGLTLAVASIDLAFAQVKPPENIEDY
AAAEDPPVFDDPAKAVEALKSALAANDFDGVAKLLGLDAAKVRTGEDAMETFAQIREG
AARNVRVRDLEGRKIIEIGDRLWPLPFPITKGEDGKWAFDTYVGLEEIVNRRVGENEL
QAIETARAYVEAQKDYASVDRDADGVLEYAQKLISSPDQTDGLFWPADQGDGESPVGD
AINEAALEKAKAGEGYFGYRYRILTSQGDNIAGGRYDYVINDNMIAGFALIVWPVTYA
ETGVKTFLVNQQGIVYERDLGASTAAIVPFIDRFDPDDTWTVVND"
misc_feature 41513..42322
/locus_tag="NGR_b00410"
/note="Protein of unknown function (DUF2950); Region:
DUF2950; pfam11453"
/db_xref="CDD:151892"
gene 42413..43558
/locus_tag="NGR_b00420"
/db_xref="GeneID:7789581"
CDS 42413..43558
/locus_tag="NGR_b00420"
/codon_start=1
/transl_table=11
/product="cation Ca exchange protein"
/protein_id="YP_002822268.1"
/db_xref="GI:227818297"
/db_xref="GeneID:7789581"
/translation="MHNFEERGAAAPPRSAIGAAIAEFRRTPLLALIVFVPVVILLER
VSPEAHTLLFLLSVVAIVPLAALLSRATEAVAAKTGDAVGGLLNATLGNLTELVISLA
ALQAGQYLLVKASIAGAIVTNTLFMLGGAFLVGGLKHHLQEFNRVNARFQASLLFLAT
IAILVPSLISEVDRAPAAAFSQQLSLGLAILLIIVYALGMLFSLRTHRELFASSGHAE
EEEKPWPLPVGTVVLIVVTLLVAMVSEIFVGSVQVAAQHLGMTPAFVGFIVVALVGGA
AEMTSAFSAARANRLDLSVSIALGSAAQIALFVAPVLVLVSYFVGPAPMSLQFWPGAV
AMMLVATMAATLLSNGGRAAWYAGVMALAVYAIFGLTLFLLPPGAPS"
misc_feature 42479..43540
/locus_tag="NGR_b00420"
/note="Ca2+/H+ antiporter [Inorganic ion transport and
metabolism]; Region: ChaA; COG0387"
/db_xref="CDD:30736"
misc_feature 43133..43516
/locus_tag="NGR_b00420"
/note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
pfam01699"
/db_xref="CDD:190072"
gene complement(43585..44037)
/locus_tag="NGR_b00430"
/db_xref="GeneID:7789582"
CDS complement(43585..44037)
/locus_tag="NGR_b00430"
/note="similar to ion transport 2 domain protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822269.1"
/db_xref="GI:227818298"
/db_xref="GeneID:7789582"
/translation="MILRLAIAGGLIAATVTIQAFFMSAGLRAFRQMEKDRPDFLSHY
PTLVTVAWVIYLIIPILFDVCLWAAFYYLAQALPSFEDALYFSTVTFTTVGYGDIVLD
RDWRQVATFEAINGWIIFGWATALMMAVIQRLYFRTDPQAMDDGDPKG"
misc_feature complement(43657..43860)
/locus_tag="NGR_b00430"
/note="Ion channel; Region: Ion_trans_2; pfam07885"
/db_xref="CDD:203792"
gene complement(44157..45395)
/locus_tag="NGR_b00440"
/db_xref="GeneID:7789583"
CDS complement(44157..45395)
/locus_tag="NGR_b00440"
/codon_start=1
/transl_table=11
/product="integrase"
/protein_id="YP_002822270.1"
/db_xref="GI:227818299"
/db_xref="GeneID:7789583"
/translation="MLLFSATHGFSGMPTRASVAESMINKHRVAASDSQAVHRRAELD
ALDAILPFGRRDQLAGLLTDDDVATLKHLAAEGMGENTLRALASDLGYLEAWCRLATG
TPLPWPAPEALILKFVAHHLWDPVKRAEDPSHGMPAEVEAELRAERLLKTQGPHAPGT
VRRRLTSWSILTRWRGLTGAFGAPSLKSALRLAVKASNRPRQRKSRKAVTVDILAQLL
GTCAGERVVDVRDRALLLTAFASGGRRRSEVAGLRVEDLVDEEPVRADPADKNSPPLP
CLSIRLGRTKTTTRDDSEHVLLIGRPASALKRWLSEAAIKEGPVFRRIDQWGNVDRRP
LTPQSVNLILKRRCRQAGLDPALFSAHGLRSGYLTEAANRGIPLPEAMEQSLHKSVTQ
AASYYNYAERKQGRAARLIV"
misc_feature complement(44163..45158)
/locus_tag="NGR_b00440"
/note="Cre recombinase, C-terminal catalytic domain.
Cre-like recombinases belong to the superfamily of DNA
breaking-rejoining enzymes, which share the same fold in
their catalytic domain and the overall reaction mechanism.
The bacteriophage P1 Cre...; Region: INT_Cre; cd00799"
/db_xref="CDD:29500"
misc_feature complement(order(44208..44210,44313..44321,44373..44375,
44379..44381,44421..44429,44655..44663,44706..44708,
44907..44909,44916..44921,45123..45125,45144..45146,
45150..45155))
/locus_tag="NGR_b00440"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29500"
misc_feature complement(order(44163..44168,44172..44180,44283..44285,
44295..44297,44676..44681,44763..44765,44808..44813,
44817..44819,44823..44825,45048..45053,45060..45062))
/locus_tag="NGR_b00440"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29500"
misc_feature complement(order(44208..44210,44235..44237,44304..44306,
44313..44315,44538..44540,44661..44663))
/locus_tag="NGR_b00440"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:29500"
misc_feature complement(order(44208..44210,44304..44306,44313..44315,
44538..44540,44661..44663))
/locus_tag="NGR_b00440"
/note="active site"
/db_xref="CDD:29500"
gene 45400..45678
/locus_tag="NGR_b00450"
/db_xref="GeneID:7789584"
CDS 45400..45678
/locus_tag="NGR_b00450"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822271.1"
/db_xref="GI:227818300"
/db_xref="GeneID:7789584"
/translation="MASTVTEAAVSKNFPAYQDAAEREPVIITENGRPRTVLIAYEDY
LRLSRRDRRVETTADLSDADLAAVEKSEMEPGLEHLNAELLTDKHAAD"
misc_feature 45409..>45540
/locus_tag="NGR_b00450"
/note="Antitoxin Phd_YefM, type II toxin-antitoxin system;
Region: PhdYeFM_antitox; pfam02604"
/db_xref="CDD:202305"
gene complement(45905..46324)
/locus_tag="NGR_b00460"
/db_xref="GeneID:7789585"
CDS complement(45905..46324)
/locus_tag="NGR_b00460"
/codon_start=1
/transl_table=11
/product="nucleic acid-binding protein"
/protein_id="YP_002822272.1"
/db_xref="GI:227818301"
/db_xref="GeneID:7789585"
/translation="MSFVLDASIAASWFLPDEESEAAETLIAALAVAPGLVPALFWFE
VRNLFVMAERRGRVNPGSALAMTLSLRGLPLQDGGFGNDVSVVDLALKHGLSGYDASY
VALAKSTELPLATVDRRMAAAARGEGLKIVGPLEHEH"
misc_feature complement(45932..46315)
/locus_tag="NGR_b00460"
/note="PIN domain of the Pyrobaculum aerophilum Pae0151
and Pae2754 proteins and homologs; Region: PIN_Pae0151;
cd09873"
/db_xref="CDD:189043"
misc_feature complement(order(45974..45976,46028..46030,46193..46195,
46307..46309))
/locus_tag="NGR_b00460"
/note="putative active site [active]"
/db_xref="CDD:189043"
misc_feature complement(order(45956..45958,45968..45979,46022..46024,
46028..46042,46052..46057,46061..46066,46073..46075,
46115..46117,46124..46129,46133..46138,46172..46180,
46184..46201,46211..46219,46301..46303))
/locus_tag="NGR_b00460"
/note="homotetrameric interface [polypeptide binding];
other site"
/db_xref="CDD:189043"
misc_feature complement(45974..45976)
/locus_tag="NGR_b00460"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:189043"
gene complement(46324..46563)
/locus_tag="NGR_b00470"
/db_xref="GeneID:7789586"
CDS complement(46324..46563)
/locus_tag="NGR_b00470"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822273.1"
/db_xref="GI:227818302"
/db_xref="GeneID:7789586"
/translation="MTVTVKVAEAKAHLSELLARVEAGEEVIIARGNDPIAVLSRIRK
ESSIETAIAEIRAMRALAKPVTQEEIRAWRDEGRA"
misc_feature complement(46330..46563)
/locus_tag="NGR_b00470"
/note="Antitoxin Phd_YefM, type II toxin-antitoxin system;
Region: PhdYeFM_antitox; cl09153"
/db_xref="CDD:208990"
gene 46960..47280
/locus_tag="NGR_b00480"
/db_xref="GeneID:7789587"
CDS 46960..47280
/locus_tag="NGR_b00480"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822274.1"
/db_xref="GI:227818303"
/db_xref="GeneID:7789587"
/translation="MHGINLDDLSETELIALHDAVVDRLRFLHQQKTTHALLELAIGE
RVMFEDNSGQTQAGIVIRRNRKTVTVHGDNGRQWNVSPQLLRKEKQAVAAQGGKLVPF
LRKG"
gene 47326..47586
/locus_tag="NGR_b00490"
/db_xref="GeneID:7789588"
CDS 47326..47586
/locus_tag="NGR_b00490"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822275.1"
/db_xref="GI:227818304"
/db_xref="GeneID:7789588"
/translation="MIRRLRDQDNHRDSGETTYATGLHAAEHDVAGNTAVEAVAPQKI
LRLVTKARRSFSEEILNLPFSRGDRVAVNQRTPPTRRRYSIM"
gene complement(47571..48434)
/locus_tag="NGR_b00500"
/db_xref="GeneID:7789589"
CDS complement(47571..48434)
/locus_tag="NGR_b00500"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822276.1"
/db_xref="GI:227818305"
/db_xref="GeneID:7789589"
/translation="MAGWDETSEEITRIRRRLADLDAERAELELVLEELEQKLASGSR
AAERSSFTDAPVTNNSPSIEKIELFRRLFAGRPDVFPVRWENRKAGRSGYSPACSNEW
AKGICGKPKVKCGECPHQAFIPPIADIIEKHLRGGDGRFGDFIAGVYPLLQDETCFER
KDHLDYLQQRFAPFVKNIAVLRGGMSASDRKLANAALRVSDDEERLIIATGRYIGEGF
DDARLDTLFLTMPIAWKGTLAQYVGRLHRLHDGKKDVLVVDYVDDTVPVLARMAAKRR
AGYRALGYMIE"
misc_feature complement(<47961..48281)
/locus_tag="NGR_b00500"
/note="AE_Prim_S_like: primase domain similar to that
found in the small subunit of archaeal and eukaryotic
(A/E) DNA primases. The replication machineries of A/Es
are distinct from that of bacteria. Primases are
DNA-dependent RNA polymerases which synthesis...; Region:
AE_Prim_S_like; cl01287"
/db_xref="CDD:207372"
gene 49066..49578
/locus_tag="NGR_b00510"
/db_xref="GeneID:7789590"
CDS 49066..49578
/locus_tag="NGR_b00510"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822277.1"
/db_xref="GI:227818306"
/db_xref="GeneID:7789590"
/translation="MSRMERDGEVLRLARGLYQLPDAELDANHSLAETAKRVPKAVVC
LVSALAFHGLTDQLPRHVWLAIGRKDWAPKPDGTPIRIVRFTESLLHDGVETHLVEGV
PVKVFRVAKTIADCFRYRSKIGLSVAIEGLQEALRQRKATPGDIANQAERGGVGTVIR
PYLEALTANG"
misc_feature 49069..49416
/locus_tag="NGR_b00510"
/note="Domain of unknown function (DUF4095); Region:
DUF4095; pfam13338"
/db_xref="CDD:205518"
gene 49571..50284
/locus_tag="NGR_b00520"
/db_xref="GeneID:7789591"
CDS 49571..50284
/locus_tag="NGR_b00520"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822278.1"
/db_xref="GI:227818307"
/db_xref="GeneID:7789591"
/translation="MAKEIRNVGASVRARPLQLSKASGQSFDLVLTRFALERLLFRLS
QSPHAGRFVLKGAMLMMSWFEDPHRGTRDLDLLGFGSPEPDLMLGTFREILAQQVDDG
VMFDADTLRVDRIREELEYGGLRLRAVASISGARINLTIDIGFGDALEPGAEMLDYPS
MLDFPAPRLRAYARETVIAEKFQAMVMLGRVNSRMKDFYDIWILSRSFDFDDDRLARA
ITATFERRETPIPEDLPDA"
misc_feature 49682..50278
/locus_tag="NGR_b00520"
/note="Nucleotidyl transferase of unknown function
(DUF1814); Region: DUF1814; pfam08843"
/db_xref="CDD:204082"
gene 50293..50439
/locus_tag="NGR_b00530"
/db_xref="GeneID:7789592"
CDS 50293..50439
/locus_tag="NGR_b00530"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822279.1"
/db_xref="GI:227818308"
/db_xref="GeneID:7789592"
/translation="MAKDEQKQRQWRAFVEGVAHDPGDLTNVIAEIAAFLMPHAIAAA
KLGK"
gene complement(50825..51094)
/locus_tag="NGR_b00540"
/db_xref="GeneID:7789593"
CDS complement(50825..51094)
/locus_tag="NGR_b00540"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822280.1"
/db_xref="GI:227818309"
/db_xref="GeneID:7789593"
/translation="MIEHPASRWGDLFEQAGRIFDQANSELTLIDGWTFGGGTALMLQ
IDHRESFDVDIFLDDPQVLPYLNPKTQATRSTSALSAMSPTDRGH"
misc_feature complement(<50912..51004)
/locus_tag="NGR_b00540"
/note="Nucleotidyl transferase of unknown function
(DUF1814); Region: DUF1814; cl00973"
/db_xref="CDD:207266"
gene complement(51095..51487)
/locus_tag="NGR_b00550"
/db_xref="GeneID:7789594"
CDS complement(51095..51487)
/locus_tag="NGR_b00550"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822281.1"
/db_xref="GI:227818310"
/db_xref="GeneID:7789594"
/translation="MPVGGRRSSTDTVELTSPTRDPCFAVIVAVYKDLRSSAVGKMSV
VAVKVLSTVNAPYGTALSAEQLASKISDPASAVDFDPSAFSFFSEVDEDLQNSFLDEM
HVDPSIAANLAREFSALAGYLLPLARAA"
gene complement(51671..51808)
/locus_tag="NGR_b00560"
/pseudo
/db_xref="GeneID:7789595"
gene complement(51872..52498)
/locus_tag="NGR_b00570"
/pseudo
/db_xref="GeneID:7789596"
gene complement(52495..52815)
/locus_tag="NGR_b00580"
/db_xref="GeneID:7789597"
CDS complement(52495..52815)
/locus_tag="NGR_b00580"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822282.1"
/db_xref="GI:227818311"
/db_xref="GeneID:7789597"
/translation="MKILIEVDEAAERLEELIDLAFRQDVCVPGRAAYSSARRLSQSE
DLLSNESAETLPHTGPASKLVEGGKLGSIDDVWILAAEGKPGREHDMTSAHDDLYDVD
GLPR"
gene complement(52824..53201)
/locus_tag="NGR_b00590"
/db_xref="GeneID:7789598"
CDS complement(52824..53201)
/locus_tag="NGR_b00590"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822283.1"
/db_xref="GI:227818312"
/db_xref="GeneID:7789598"
/translation="MKMLLDSHAVYWWTIGSDRLSLRARSLIEDKANTILVSAVSFYE
LDNKMRLKKLDLKPQELRAAVTASGLQTLAITDLHAELAASFDWDHRDPWDRLLAAQT
RLEHCTFVSLDSAFDGVLHERVW"
misc_feature complement(52851..53192)
/locus_tag="NGR_b00590"
/note="PIN domain of the VapC-like Sll0205 protein and
homologs; Region: PIN_Sll0205; cd09872"
/db_xref="CDD:189042"
misc_feature complement(order(52863..52865,52917..52919,53070..53072,
53184..53186))
/locus_tag="NGR_b00590"
/note="putative active site [active]"
/db_xref="CDD:189042"
gene complement(53198..53488)
/locus_tag="NGR_b00600"
/db_xref="GeneID:7789599"
CDS complement(53198..53488)
/locus_tag="NGR_b00600"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822284.1"
/db_xref="GI:227818313"
/db_xref="GeneID:7789599"
/translation="MPQITYKISEARKHFAEVLERANHGEEIIIMRGNEVYARIGPAD
GGKRPFGLLRQRGLPDDLFDEIDAEQAAIDAGDWNDDVGVWQGKSNDRDPSK"
misc_feature complement(<53312..53488)
/locus_tag="NGR_b00600"
/note="Antitoxin Phd_YefM, type II toxin-antitoxin system;
Region: PhdYeFM_antitox; cl09153"
/db_xref="CDD:208990"
gene 54242..54841
/locus_tag="NGR_b00610"
/db_xref="GeneID:7789600"
CDS 54242..54841
/locus_tag="NGR_b00610"
/codon_start=1
/transl_table=11
/product="osmotically inducible protein Y"
/protein_id="YP_002822285.1"
/db_xref="GI:227818314"
/db_xref="GeneID:7789600"
/translation="MRTDIDIKQDVEGELHMNPDIDATDVAVAVKDGVVTLTGYVRSY
SQKWEAERTGKLAIGVAGVVNDIEVRLPVFAQRPDPEIVCDAVAAIQAELPYSSEHIR
VVVRDGWLTLEGRVDWDYARERAESAVRRVRGVKGVSSLIQVTRVAPSEVKRKIEEAF
RRNAELDANRIKVETDGGVVTLRGTVRSWAEREEAQAQN"
misc_feature 54296..54826
/locus_tag="NGR_b00610"
/note="Predicted periplasmic or secreted lipoprotein
[General function prediction only]; Region: OsmY; COG2823"
/db_xref="CDD:32651"
misc_feature 54296..54451
/locus_tag="NGR_b00610"
/note="BON domain; Region: BON; pfam04972"
/db_xref="CDD:203137"
misc_feature 54731..>54826
/locus_tag="NGR_b00610"
/note="BON domain; Region: BON; pfam04972"
/db_xref="CDD:203137"
gene 55220..55714
/locus_tag="NGR_b00620"
/db_xref="GeneID:7789601"
CDS 55220..55714
/locus_tag="NGR_b00620"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822286.1"
/db_xref="GI:227818315"
/db_xref="GeneID:7789601"
/translation="MTSLPRVTELTRELVSRQFDDLGPEACLAEITECLMRENPELLD
MARKCAADVGDAPKIMVGFGMFYQLLISASLDAADKQIMHPLPCVTAKTRDALVREID
DDGSEAFTLRAIEDLERTNPELMQMAHGFASRYKDYLHVMQGFALLYRSLDVQATTDR
KYLH"
gene complement(56382..56657)
/locus_tag="NGR_b00630"
/db_xref="GeneID:7789602"
CDS complement(56382..56657)
/locus_tag="NGR_b00630"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822287.1"
/db_xref="GI:227818316"
/db_xref="GeneID:7789602"
/translation="MILGAGLAGMTAAPELSAAGYLVVALEYPEQAGGRNWTLAARTP
ELGGPEGSGSLKATISILLGGESLITTTACSITVAAECGARTLHQGQ"
misc_feature complement(<56514..56654)
/locus_tag="NGR_b00630"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene complement(56993..57424)
/locus_tag="NGR_b00640"
/db_xref="GeneID:7789603"
CDS complement(56993..57424)
/locus_tag="NGR_b00640"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822288.1"
/db_xref="GI:227818317"
/db_xref="GeneID:7789603"
/translation="MQQNSASEKYRNFRLALAIGGSMLLMIAILLSSATRPAFSQNVV
VIDVDVKEVAKGYRASELAGADVENNTGEKIGSIDDLIVDREKVLFAILEVGGFLGIG
GFLVAIPYNSLELNENGSKIVLAQGSKEELQKLPEFKYEKK"
misc_feature complement(57029..57256)
/locus_tag="NGR_b00640"
/note="PRC-barrel domain; Region: PRC; pfam05239"
/db_xref="CDD:203221"
gene complement(57563..58105)
/locus_tag="NGR_b00650"
/db_xref="GeneID:7789604"
CDS complement(57563..58105)
/locus_tag="NGR_b00650"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822289.1"
/db_xref="GI:227818318"
/db_xref="GeneID:7789604"
/translation="MSTLKVPINPRDHRRGGTNATVTLVEYGDYQCPVCAIANPVVRS
LENRYGQALSVVFRHFPMIEVHPFAGTAAETAEFAGDHGLFWEMHDAIFSNQHRLSIQ
LLFAIASTLQLSQIGLRDSIARSLHADKIQADFIGGVRSGVNGTPTFFVNGLRHEGGF
TAPELAASIQTAMDVLAPVR"
misc_feature complement(57584..>58105)
/locus_tag="NGR_b00650"
/note="Protein-disulfide isomerase [Posttranslational
modification, protein turnover, chaperones]; Region: DsbG;
COG1651"
/db_xref="CDD:31837"
misc_feature complement(57596..58081)
/locus_tag="NGR_b00650"
/note="Thioredoxin; Region: Thioredoxin_4; pfam13462"
/db_xref="CDD:205640"
gene complement(58071..58583)
/locus_tag="NGR_b00660"
/db_xref="GeneID:7789605"
CDS complement(58071..58583)
/locus_tag="NGR_b00660"
/note="Thioredoxin-dependent peroxide reductase; TPx-Eg"
/codon_start=1
/transl_table=11
/product="thioredoxin peroxidase"
/protein_id="YP_002822290.1"
/db_xref="GI:227818319"
/db_xref="GeneID:7789605"
/translation="MSAILASGTKAPSFTLRVTPDQTLSLSEFAGRRVILAFYPADWS
PVCGDQMTLYNHVLSEFRKKGAELVGISVDGAWCHQAFARDRNLHFPLLADFHPKGEV
SRAYGAYRDDVGESARALFIIDENGTIAWSHLSPVAVNPGADGILDALDQMPNLEQKN
VDAQSSHQSA"
misc_feature complement(58125..58562)
/locus_tag="NGR_b00660"
/note="Peroxiredoxin [Posttranslational modification,
protein turnover, chaperones]; Region: AhpC; COG0450"
/db_xref="CDD:30799"
misc_feature complement(58131..58562)
/locus_tag="NGR_b00660"
/note="Peroxiredoxin (PRX) family, AhpE-like subfamily;
composed of proteins similar to Mycobacterium tuberculosis
AhpE. AhpE is described as a 1-cys PRX because of the
absence of a resolving cysteine. The structure and
sequence of AhpE, however, show greater...; Region:
PRX_AhpE_like; cd03018"
/db_xref="CDD:48567"
misc_feature complement(order(58494..58496,58500..58505))
/locus_tag="NGR_b00660"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48567"
misc_feature complement(order(58230..58232,58443..58445,58452..58454))
/locus_tag="NGR_b00660"
/note="catalytic triad [active]"
/db_xref="CDD:48567"
gene complement(58605..59216)
/locus_tag="NGR_b00670"
/db_xref="GeneID:7789606"
CDS complement(58605..59216)
/locus_tag="NGR_b00670"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822291.1"
/db_xref="GI:227818320"
/db_xref="GeneID:7789606"
/translation="MTSIQSTDSPKTEAMNDMLANNWWAVALRGVVAILFGIAAFAMP
LLMMVSLVVVFAAFSFVDGVFGIIMSVRGARKGERWIWLLLSGILSIVASAVAILWPG
ITVLAFVILVAAWALVSGTFMLISAFRLKIDHGRVWLVIGGIASVVFGILLVISPFIG
ALVLTFWTGAHAVVLGATLLVLAYKLRSHKTGMPSDLATSGTA"
misc_feature complement(58710..59204)
/locus_tag="NGR_b00670"
/note="Uncharacterized conserved protein [Function
unknown]; Region: HdeD; COG3247"
/db_xref="CDD:33058"
gene complement(59250..59900)
/locus_tag="NGR_b00680"
/db_xref="GeneID:7789607"
CDS complement(59250..59900)
/locus_tag="NGR_b00680"
/codon_start=1
/transl_table=11
/product="osmotically inducible protein Y
domain-containing protein"
/protein_id="YP_002822292.1"
/db_xref="GI:227818321"
/db_xref="GeneID:7789607"
/translation="MKSDEDIRTDVESELQWDPALDANDIVPTVKDGAVTLTGFVKSF
NEKWEAEDVAKRVAGVLGVANDLDVRLPSIGQRPDPDIARDAVTTLLYELPDLVDIRV
VVKDGLVRLEGEVETHRQSRHVTRAVRRVRGIKGVINTIKVRSPVSPEDIHQTIAEAL
KRNALLEAANIVVEANGDEVVLKGTVRSWAERKEADEAAWRAPGVLKVDNRITIAS"
misc_feature complement(59256..59849)
/locus_tag="NGR_b00680"
/note="Predicted periplasmic or secreted lipoprotein
[General function prediction only]; Region: OsmY; COG2823"
/db_xref="CDD:32651"
misc_feature complement(59691..59846)
/locus_tag="NGR_b00680"
/note="BON domain; Region: BON; pfam04972"
/db_xref="CDD:203137"
misc_feature complement(59466..59606)
/locus_tag="NGR_b00680"
/note="BON domain; Region: BON; pfam04972"
/db_xref="CDD:203137"
misc_feature complement(59253..59405)
/locus_tag="NGR_b00680"
/note="BON domain; Region: BON; pfam04972"
/db_xref="CDD:203137"
gene 60073..60918
/locus_tag="NGR_b00690"
/db_xref="GeneID:7789608"
CDS 60073..60918
/locus_tag="NGR_b00690"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="YP_002822293.1"
/db_xref="GI:227818322"
/db_xref="GeneID:7789608"
/translation="MPSTIRTTRLPAGDQVPVLGQGTWGMGEKPIRRTDEVAALRLGL
DLGMTLIDTAEMYGDGGAEEVVGEAVCGRRDEVFIVSKVLPIHASRLGVTTACNQSLR
RLRTDRIDLYLLHWRLGTPLAETIAGFEALKAAGKIRHWGVSNFDTADMVEVAGVAEG
KNVQTDQLLYNLRRRGIEYDLLPWCRERGIPVMAYSPVEQGVLADDGRLARVADRYGV
SRSQIALAWVLRQDGVIAIPKASKQDHVRENRAAHDIRLIPADLQELDRSFPPPTAKR
PLEMI"
misc_feature 60109..60873
/locus_tag="NGR_b00690"
/note="Aldo-keto reductases (AKRs) are a superfamily of
soluble NAD(P)(H) oxidoreductases whose chief purpose is
to reduce aldehydes and ketones to primary and secondary
alcohols. AKRs are present in all phyla and are of
importance to both health and industrial...; Region:
Aldo_ket_red; cd06660"
/db_xref="CDD:119408"
misc_feature 60127..60882
/locus_tag="NGR_b00690"
/note="Aldo/keto reductase family; Region: Aldo_ket_red;
pfam00248"
/db_xref="CDD:201112"
misc_feature order(60136..60144,60226..60228,60241..60243,60316..60318,
60415..60420,60502..60507,60571..60573,60655..60672,
60733..60735,60781..60792,60805..60807,60814..60819)
/locus_tag="NGR_b00690"
/note="active site"
/db_xref="CDD:119408"
misc_feature order(60226..60228,60241..60243,60316..60318,60415..60417)
/locus_tag="NGR_b00690"
/note="catalytic tetrad [active]"
/db_xref="CDD:119408"
gene complement(61285..62970)
/locus_tag="NGR_b00700"
/db_xref="GeneID:7789609"
CDS complement(61285..62970)
/locus_tag="NGR_b00700"
/codon_start=1
/transl_table=11
/product="glutathione-regulated potassium-efflux system
protein"
/protein_id="YP_002822294.1"
/db_xref="GI:227818323"
/db_xref="GeneID:7789609"
/translation="MNDFLLARTLILVAASGLTVGILTALRMPAVMGYLVVGVALGPH
GFDLIESAEDTRFLAELGLIFLMFMVGLEFSIPTILGARWDVLVAGSLQVSMTVALVA
TGLVLTGAQAQPAIIMGGAIAMSSTAVTLKQLAEQGEITNRHGRLALGILLFQDVATL
PLLILADAWSSAGAAAPIAILKQMAMAAAALAAAAIIARPLIHFGFSWVLGTRSPDLF
LLWVLITALGTAYAVHLAGLAPPIGAFVAGMVIGESEFRHRVEEDIRPFRDVLVGLFF
ISVGMSIDLSAIARFPGAIILWVLVFVPVKALLVFMTGLLAGAHREASARTAIILAHG
GEFGLLLITLALQSGLVSPDLGQPALIALALTMGLAPLVIQRNHWAEWPFGHRDRRIA
ATEVSIRALSGGLHDHVILCGCGRVGRLVATVLESADIAYIAIELDLTRFRAARRQGH
EVVFGDARHHRILEAAGLDRAQLVILTFDRHGAVERILHQIKTLDPAPASLVSTADDL
NMARFSQLDATAVFPENLAAGLSLADRALLFCGKTQDEAACIVSTVRAELIKR"
misc_feature complement(61849..62943)
/locus_tag="NGR_b00700"
/note="Sodium/hydrogen exchanger family; Region:
Na_H_Exchanger; pfam00999"
/db_xref="CDD:201544"
misc_feature complement(62119..62931)
/locus_tag="NGR_b00700"
/note="transporter, monovalent cation:proton antiporter-2
(CPA2) family; Region: 2a37; TIGR00932"
/db_xref="CDD:162117"
misc_feature complement(<61360..61758)
/locus_tag="NGR_b00700"
/note="Kef-type K+ transport systems, predicted
NAD-binding component [Inorganic ion transport and
metabolism]; Region: Kch; COG1226"
/db_xref="CDD:31419"
misc_feature complement(61405..61746)
/locus_tag="NGR_b00700"
/note="TrkA-N domain; Region: TrkA_N; pfam02254"
/db_xref="CDD:202177"
gene complement(63331..63984)
/locus_tag="NGR_b00710"
/db_xref="GeneID:7789610"
CDS complement(63331..63984)
/locus_tag="NGR_b00710"
/codon_start=1
/transl_table=11
/product="osmotically inducible protein Y"
/protein_id="YP_002822295.1"
/db_xref="GI:227818324"
/db_xref="GeneID:7789610"
/translation="MRIDSDIKRDVESELKWDPDIDASDIGVAVKNGVVTLSGFVRSY
SQKYEAEKATKRVKGVLGVANDIEVRLPSLHEKPDPEIARAAVEAIKSELPYSHENIK
VVVKNGWVTLEGNAEWEYQRYRAEAAVRKVRSVKGISNLVMLKPRVAPSEIKSKIEEA
LKRMAEVDAGRVTVTASGGEVTLTGTVRSWAERQEAERAAWRAPGVTKVENRITISP"
misc_feature complement(63334..63933)
/locus_tag="NGR_b00710"
/note="Predicted periplasmic or secreted lipoprotein
[General function prediction only]; Region: OsmY; COG2823"
/db_xref="CDD:32651"
misc_feature complement(63775..63930)
/locus_tag="NGR_b00710"
/note="BON domain; Region: BON; pfam04972"
/db_xref="CDD:203137"
misc_feature complement(63547..63690)
/locus_tag="NGR_b00710"
/note="BON domain; Region: BON; pfam04972"
/db_xref="CDD:203137"
misc_feature complement(63334..63492)
/locus_tag="NGR_b00710"
/note="BON domain; Region: BON; pfam04972"
/db_xref="CDD:203137"
gene complement(64177..64680)
/locus_tag="NGR_b00720"
/db_xref="GeneID:7789611"
CDS complement(64177..64680)
/locus_tag="NGR_b00720"
/codon_start=1
/transl_table=11
/product="heat shock protein"
/protein_id="YP_002822296.1"
/db_xref="GI:227818325"
/db_xref="GeneID:7789611"
/translation="MKIKDLVPWRGSGRDIASRTAPIDPMRALQLDVDRAFDHFWRAV
PYPFAALGRLEETDTVRVDVVDNDKEVTVTAELPGMSDADVDVSISDGRLTIRGEKKS
DREAEENGVLVRERIYGAVERTVPLPDGVDPDAAKATFRNGVLTIAIPKSEKFQANTK
HVPVQVG"
misc_feature complement(64186..>64476)
/locus_tag="NGR_b00720"
/note="Molecular chaperone (small heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: IbpA; COG0071"
/db_xref="CDD:30420"
misc_feature complement(64228..64476)
/locus_tag="NGR_b00720"
/note="Alpha-crystallin domain (ACD) of
alpha-crystallin-type small(s) heat shock proteins (Hsps).
sHsps are small stress induced proteins with monomeric
masses between 12 -43 kDa, whose common feature is the
Alpha-crystallin domain (ACD). sHsps are generally...;
Region: ACD_sHsps-like; cd06464"
/db_xref="CDD:107221"
misc_feature complement(order(64249..64254,64312..64314,64444..64449,
64453..64455,64459..64461))
/locus_tag="NGR_b00720"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:107221"
gene complement(64694..65074)
/locus_tag="NGR_b00730"
/db_xref="GeneID:7789612"
CDS complement(64694..65074)
/locus_tag="NGR_b00730"
/codon_start=1
/transl_table=11
/product="small class I heat shock protein"
/protein_id="YP_002822297.1"
/db_xref="GI:227818326"
/db_xref="GeneID:7789612"
/translation="MTDHETNGTAQAEATRTAPVYTPPTDIIETTSAVQMVLDMPGAN
PDSLDVTLDNRVLRISAQSASSAPEGYSLLHAEYRDGTYERSFMVSEPIEMDKIEAVF
KDGVLRLTLPKAAPSLAKISVKAA"
misc_feature complement(64700..>65038)
/locus_tag="NGR_b00730"
/note="Molecular chaperone (small heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: IbpA; COG0071"
/db_xref="CDD:30420"
misc_feature complement(64736..64999)
/locus_tag="NGR_b00730"
/note="Alpha-crystallin domain (ACD) of
alpha-crystallin-type small(s) heat shock proteins (Hsps).
sHsps are small stress induced proteins with monomeric
masses between 12 -43 kDa, whose common feature is the
Alpha-crystallin domain (ACD). sHsps are generally...;
Region: ACD_sHsps-like; cd06464"
/db_xref="CDD:107221"
misc_feature complement(order(64757..64762,64820..64822,64949..64954,
64958..64960,64964..64966,64985..64999))
/locus_tag="NGR_b00730"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:107221"
gene complement(65088..65528)
/locus_tag="NGR_b00740"
/db_xref="GeneID:7789613"
CDS complement(65088..65528)
/locus_tag="NGR_b00740"
/codon_start=1
/transl_table=11
/product="heat shock protein, Hsp20 family"
/protein_id="YP_002822298.1"
/db_xref="GI:227818327"
/db_xref="GeneID:7789613"
/translation="MLHHLENTGRWLDPLRQMRFAQRDMSRLLDNLRLAAPPEFPLMN
IWAGTDGAVVTAEIPGVAPEELDIAVHQNMVTLRGSRPAEPLAEDAVIHRQERATGAF
ARNLILPFRVDGDHATAKFRNGLLRLDLPRPKADRPHKINVSRS"
misc_feature complement(65097..65516)
/locus_tag="NGR_b00740"
/note="Molecular chaperone (small heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: IbpA; COG0071"
/db_xref="CDD:30420"
misc_feature complement(65133..65381)
/locus_tag="NGR_b00740"
/note="Alpha-crystallin domain (ACD) of
alpha-crystallin-type small(s) heat shock proteins (Hsps).
sHsps are small stress induced proteins with monomeric
masses between 12 -43 kDa, whose common feature is the
Alpha-crystallin domain (ACD). sHsps are generally...;
Region: ACD_sHsps-like; cd06464"
/db_xref="CDD:107221"
misc_feature complement(order(65154..65159,65217..65219,65349..65354,
65358..65360,65364..65366))
/locus_tag="NGR_b00740"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:107221"
gene 65717..66631
/locus_tag="NGR_b00750"
/db_xref="GeneID:7789614"
CDS 65717..66631
/locus_tag="NGR_b00750"
/codon_start=1
/transl_table=11
/product="DnaJ/CbpA-type protein"
/protein_id="YP_002822299.1"
/db_xref="GI:227818328"
/db_xref="GeneID:7789614"
/translation="MPMNNGDPYEILGIKRDASQKDIQAAYRRRAKKLHPDLNPGNKQ
AEQDFKDLSAAYEILRDEEKRSRFDRGEIDATGAQKPERRYYRDFADAGAGSAYENGA
GFADFGADDIFAEFFSHRGRKGSRMRGTDVRYSMEIDFLEAVNGGTRQVTLSDGETLE
IRIPPGARDGQTLRLRGKGGAGEGGAETGDALIELHVRPHPFYRREGDDIHLNLPISL
AEAVLGGKVTVPTPAGPVMASVPENSSSGRRLRVKGKGVARRNGTRGDVYATLKIVLP
ERPDPELKAFMTNWSAGKRYNPRQGMGV"
misc_feature 65723..66625
/locus_tag="NGR_b00750"
/note="curved DNA-binding protein CbpA; Provisional;
Region: PRK10266"
/db_xref="CDD:182347"
misc_feature 65735..65899
/locus_tag="NGR_b00750"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of Hsp70s; Region: DnaJ;
cd06257"
/db_xref="CDD:99751"
misc_feature order(65819..65827,65852..65854,65861..65866,65873..65878)
/locus_tag="NGR_b00750"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
misc_feature 66107..66550
/locus_tag="NGR_b00750"
/note="C-terminal substrate binding domain of DnaJ and
HSP40; Region: DnaJ_C; cd10747"
/db_xref="CDD:199909"
misc_feature order(66116..66118,66161..66178,66182..66184,66254..66256)
/locus_tag="NGR_b00750"
/note="substrate binding site [polypeptide binding]; other
site"
/db_xref="CDD:199909"
misc_feature order(66368..66373,66380..66385,66443..66454,66539..66550)
/locus_tag="NGR_b00750"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:199909"
gene 66635..66985
/locus_tag="NGR_b00760"
/db_xref="GeneID:7789615"
CDS 66635..66985
/locus_tag="NGR_b00760"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822300.1"
/db_xref="GI:227818329"
/db_xref="GeneID:7789615"
/translation="MDYQEFARDLRIDMERLQVFIDRGWISPAMPEGRPMFRDVDLAR
AALIADLANEMGVNDEGVDLVLDLLDQLYSLRFAFSNLIDALEVQPRDVRRHVVNDAQ
KLNRLTRRGLRSLR"
gene complement(67054..67650)
/locus_tag="NGR_b00770"
/db_xref="GeneID:7789616"
CDS complement(67054..67650)
/locus_tag="NGR_b00770"
/codon_start=1
/transl_table=11
/product="heat shock protein GrpE-like protein"
/protein_id="YP_002822301.1"
/db_xref="GI:227818330"
/db_xref="GeneID:7789616"
/translation="MADERHRQKPGPKAAESGPDAEMPAAETVADQASLTALQAELAE
TKDRLLRAVAEQQNIRLQMQRQCEDAVKFAASQLMGDLLDTLDNLRRAIESVPSEASG
HDVVNPLLKGVEATESNLLATLARHGVQRIDPLGQAFDPHHHHAIFQRPDATAAEGTV
VEVLQPGYMLHGRVLRPAMVGVAVRGSQHGGPPRDDLA"
misc_feature complement(67099..67605)
/locus_tag="NGR_b00770"
/note="GrpE; Region: GrpE; pfam01025"
/db_xref="CDD:201556"
misc_feature complement(67105..67527)
/locus_tag="NGR_b00770"
/note="GrpE is the adenine nucleotide exchange factor of
DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the
ATPase domain of Hsp70 catalyzing the dissociation of ADP,
which enables rebinding of ATP, one step in the Hsp70
reaction cycle in protein folding; Region: GrpE; cd00446"
/db_xref="CDD:73207"
misc_feature complement(order(67270..67272,67303..67305,67312..67314,
67375..67377,67387..67389,67408..67410,67417..67419,
67429..67431,67471..67476,67483..67485,67495..67497,
67504..67509,67516..67521))
/locus_tag="NGR_b00770"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:73207"
misc_feature complement(order(67120..67122,67132..67134,67159..67161,
67207..67221,67228..67230,67468..67470))
/locus_tag="NGR_b00770"
/note="hsp70 (ATPase domain) interactions [polypeptide
binding]; other site"
/db_xref="CDD:73207"
gene complement(67643..69559)
/gene="dnaK1"
/locus_tag="NGR_b00780"
/db_xref="GeneID:7789617"
CDS complement(67643..69559)
/gene="dnaK1"
/locus_tag="NGR_b00780"
/note="Heat shock protein 70"
/codon_start=1
/transl_table=11
/product="chaperone protein DnaK"
/protein_id="YP_002822302.1"
/db_xref="GI:227818331"
/db_xref="GeneID:7789617"
/translation="MASKVIGIDLGTTNSCVAVIEGTQAKIIENAEGGRTTPSVVAFT
KDGEILVGQPAKRQAVTNPENTIFAIKRLIGRRYDDPIVEKDKKLVPYKIVKGNNGDA
WIEVAGKKYSPSQISSHILVKMKETAEAYLGGKVSQAVITVPAYFNDSQRQATKDAGK
IAGLDVLRIINEPTAAALAYGLDKKTAAKIAVYDLGGGTFDISLLDIGDGVFEVKATN
GDTFLGGEDFDKRIVDWLADEFQKDQRIDLRNDRLALQRLREAAEKAKIELSSALETT
VSLPFITADQNGPKHLEIKLRRAKLEDLVDDLIRRTEKPCKAAMKDARVKPGDIDETV
LVGGMTRMPKVQEVVVEIFGKEPNKSVNPDEVVAIGAAIQAGVLRGDVKDVLLLDVTP
LSLGIETLGGVFTRLIERNTTIPAKKSQIFSTAEDNQNAVTIRVFQGEREMAADNKLL
GQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVTAKDKATGKEQQIKIQTSGGLSQSDI
DRMVKEAEANAEADKRRRALVEARNQADAQIAASQKALDEAKDKAPSADRAPVEKAID
ELKSAMTGDSVDEIEAKTKALQIASVNFGAKVHEASGASTSGAGDSSGTSSGDDVVDA
DFEEVDDKDGQRHG"
misc_feature complement(67760..69553)
/gene="dnaK1"
/locus_tag="NGR_b00780"
/note="molecular chaperone DnaK; Provisional; Region:
dnaK; PRK00290"
/db_xref="CDD:178963"
misc_feature complement(68465..69553)
/gene="dnaK1"
/locus_tag="NGR_b00780"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:213144"
misc_feature complement(order(68549..68551,68969..68980,69044..69046,
69512..69514,69518..69520,69524..69535))
/gene="dnaK1"
/locus_tag="NGR_b00780"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
gene complement(69701..70330)
/locus_tag="NGR_b00790"
/db_xref="GeneID:7789618"
CDS complement(69701..70330)
/locus_tag="NGR_b00790"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822303.1"
/db_xref="GI:227818332"
/db_xref="GeneID:7789618"
/translation="MAEGDDVLERLVVREVAAVFHGKEILEDAIQALLHAGFDRGDID
IMGDIETVRQRLGTLYVPSEEIADVPGTPRGAYIARDDIATATAGVAGMLFYLGAATA
AMTVVASGGSLALVAAAAVAAGAVGAGIGASAIRLLGKKQAEELELQLMSGGIVVWVR
TRDPDKEAQAQEILARFGGEAIRVHEIEIDKRLDDLPLSKVKPDPWLGG"
gene complement(70421..71077)
/locus_tag="NGR_b00800"
/db_xref="GeneID:7789619"
CDS complement(70421..71077)
/locus_tag="NGR_b00800"
/codon_start=1
/transl_table=11
/product="FixK family transcriptional regulator"
/protein_id="YP_002822304.1"
/db_xref="GI:227818333"
/db_xref="GeneID:7789619"
/translation="MVDAPAVPFPSQRLSRAPAEPPRLRSIAHLRRFRRDQDIYGQEE
RNDTWYRVISGSARKYLTRADGRRQLVDIYLPGDLFGFTSRVHHRFAVQAVADQTLIA
CYPRWRVEALAEEDSATAREIIVQSFEALERLQEQMLVIGTVTAQEKVRHFLVYFHDR
VSAGKDDSLALPISRYDIADMLGISAETVCRAFTDLRESGVISLQGPRHIKIMRRPSR
"
misc_feature complement(70706..71026)
/locus_tag="NGR_b00800"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
cd00038"
/db_xref="CDD:28920"
misc_feature complement(70433..71011)
/locus_tag="NGR_b00800"
/note="cAMP-binding proteins - catabolite gene activator
and regulatory subunit of cAMP-dependent protein kinases
[Signal transduction mechanisms]; Region: Crp; COG0664"
/db_xref="CDD:31008"
misc_feature complement(order(70808..70816,70835..70837))
/locus_tag="NGR_b00800"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:28920"
misc_feature complement(order(70721..70729,70739..70747))
/locus_tag="NGR_b00800"
/note="flexible hinge region; other site"
/db_xref="CDD:28920"
misc_feature complement(70436..70642)
/locus_tag="NGR_b00800"
/note="helix_turn_helix, cAMP Regulatory protein
C-terminus; DNA binding domain of prokaryotic regulatory
proteins belonging to the catabolite activator protein
family; Region: HTH_CRP; cd00092"
/db_xref="CDD:28976"
misc_feature complement(70628..70633)
/locus_tag="NGR_b00800"
/note="putative switch regulator; other site"
/db_xref="CDD:28976"
misc_feature complement(order(70523..70525,70550..70558,70562..70564))
/locus_tag="NGR_b00800"
/note="non-specific DNA interactions [nucleotide binding];
other site"
/db_xref="CDD:28976"
misc_feature complement(70505..70525)
/locus_tag="NGR_b00800"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:28976"
misc_feature complement(order(70505..70507,70517..70522))
/locus_tag="NGR_b00800"
/note="sequence specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28976"
misc_feature complement(70517..70522)
/locus_tag="NGR_b00800"
/note="putative cAMP binding site [chemical binding];
other site"
/db_xref="CDD:28976"
gene complement(72524..72856)
/locus_tag="NGR_b00810"
/db_xref="GeneID:7789620"
CDS complement(72524..72856)
/locus_tag="NGR_b00810"
/note="cytochrome c554"
/codon_start=1
/transl_table=11
/product="cytochrome c-554"
/protein_id="YP_002822305.1"
/db_xref="GI:227818334"
/db_xref="GeneID:7789620"
/translation="MLRIVVCTLTVMLALETTPPAIAGDPAAGKKIVGQCATCHGQDG
VGRMPDVPNLAGESTIYLTKELNAYRSGERDHPQMSIIAKGLSDEQIADLAAWYAALK
VTVEMPDL"
misc_feature complement(72545..72856)
/locus_tag="NGR_b00810"
/note="Cytochrome c553 [Energy production and conversion];
Region: COG2863"
/db_xref="CDD:32690"
misc_feature complement(72566..72856)
/locus_tag="NGR_b00810"
/note="Cytochrome c, mono- and diheme variants [Energy
production and conversion]; Region: CccA; COG2010"
/db_xref="CDD:32193"
gene complement(72868..74133)
/locus_tag="NGR_b00820"
/db_xref="GeneID:7789621"
CDS complement(72868..74133)
/locus_tag="NGR_b00820"
/codon_start=1
/transl_table=11
/product="glucose/sorbosone dehydrogenase"
/protein_id="YP_002822306.1"
/db_xref="GI:227818335"
/db_xref="GeneID:7789621"
/translation="MTRRFLSSVAIMALGAGPAFGQSDSIGTLRQFGKTGTSSEAFQP
VDQHGDYAGQLKMNLEQITLPPGFAIDLFAVVPDARHIAIGPQGVAVFVGTRKEEVWV
ATDRDKDRQADEVKRFAPSIRFNVPNGPCFSRNGVLYIAEQNRVLAFPAAEFFYESPD
VAVEIVVPQRELIPPEEESFNHTARVCDIGPDDKLYIALGQPYNVPPPEKLETYDRVG
MAGIIRLDRNGANREVYARGIRNSVGMDFRPETTELWFTDNQVDGMGDDTPPGELNRS
TQPGQHFGFPWYGGGLVRTREYQDTEPPADAVPPVLEFEAHAADLGMMFYTGAQFPQK
YRGGIFSAQHGSWNRTVPVGARVMFTPVEADGNAGEPEVFAAGWLMPSGEYMGRPVDV
AQLSDGSILVSDDLAGAVYRISYQPPPAE"
misc_feature complement(72886..73983)
/locus_tag="NGR_b00820"
/note="Glucose/sorbosone dehydrogenases [Carbohydrate
transport and metabolism]; Region: COG2133"
/db_xref="CDD:32316"
gene complement(74251..74730)
/locus_tag="NGR_b00830"
/db_xref="GeneID:7789622"
CDS complement(74251..74730)
/locus_tag="NGR_b00830"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822307.1"
/db_xref="GI:227818336"
/db_xref="GeneID:7789622"
/translation="MLIRNGLRTTRAELLPLSFYERFEYVVVVILTALIAVVVVAAVW
NLTLKILVGLVLSGSLDPSDYTAFQDVFGMIFTVIIALEFKKSLLVVAARRDTVVAIR
SVVVIALLAICRKVIILDLTETDALHILALAAAILALGIVYWLVSDRDRRPVKDSQG"
misc_feature complement(<74356..74517)
/locus_tag="NGR_b00830"
/note="Phosphate-starvation-inducible E; Region: PsiE;
cl01264"
/db_xref="CDD:207366"
gene complement(74875..75972)
/locus_tag="NGR_b00840"
/db_xref="GeneID:7789623"
CDS complement(74875..75972)
/locus_tag="NGR_b00840"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822308.1"
/db_xref="GI:227818337"
/db_xref="GeneID:7789623"
/translation="MPQTERTEIRRLLRALVRLSALPLLWKEMGDEAIAGNLASVLVK
ILDADFAYLFVDADPHTVELAFGPEGRIPAALIPAIRASLHGSSVRRLSRIQSALSGD
LVTVFSTTLGFKAEAILFVASKRSDYPTGFERLVLRMAANEATAAMEQAEGPVVATHL
TTLVSLSSNFIGVANLQGVPLFVNPAGLRLVGMASIQEAQELHVVDFLEFRDRDRARY
EVWPRVLSEGRWAGQLSFLNAKTGMTTPLLVESFRIDARTTEPVAVGTISVDIRKWNR
AERISNDSPALATTREIMLAVARVESLSERERQVLHALVAGCSHKVIAHELGISVRTI
EVHRARMMRRLGVRTLAEAIKLAIISGAVKP"
misc_feature complement(75160..75456)
/locus_tag="NGR_b00840"
/note="PAS domain; Region: PAS_9; pfam13426"
/db_xref="CDD:205604"
misc_feature complement(74887..>75237)
/locus_tag="NGR_b00840"
/note="response regulator FixJ; Provisional; Region: fixJ;
PRK09390"
/db_xref="CDD:181815"
misc_feature complement(74896..75066)
/locus_tag="NGR_b00840"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(74923..74925,74956..74970,74974..74979,
74983..74988,75010..75018,75055..75063))
/locus_tag="NGR_b00840"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(74896..74901,74908..74910,74917..74925,
75016..75018,75022..75024,75028..75030))
/locus_tag="NGR_b00840"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene 76128..76433
/locus_tag="NGR_b00850"
/db_xref="GeneID:7789624"
CDS 76128..76433
/locus_tag="NGR_b00850"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822309.1"
/db_xref="GI:227818338"
/db_xref="GeneID:7789624"
/translation="MVPIDRRRYTVLDDPNSAIENEVIVTVFDWHGKAPVRATVGWNA
HSRKGRDVGSDEGAERDVEAALAQAHRLVERYGFQCIVIVLEHEDLWDPKWGTLIRR"
gene 77059..77892
/locus_tag="NGR_b00860"
/db_xref="GeneID:7789625"
CDS 77059..77892
/locus_tag="NGR_b00860"
/codon_start=1
/transl_table=11
/product="UspA-like protein"
/protein_id="YP_002822310.1"
/db_xref="GI:227818339"
/db_xref="GeneID:7789625"
/translation="MIKVVLVRLDGTSGDEFRLAASESLAKLFDSHLVGLILNTLPEP
ALAESGVSVEFWTRLLQQARERGKELESDLRSRLRAISPSAELRRFDVYAHEQARVAS
RESRAADVFLALRLSDADKTVELHDVVEEILFESGRHLFLVADQKAFGQGFEHAIIAW
NRSREAARAVAEALPYLAKSRAVTVVVIDQGAMSDLPAKEGDELVDYLRHHGISASIH
VARGRGLDTSSALLEVIAEQKADLIVMGGYGHSRLREWLLGGVTFNLLRKSPVSLVIA
H"
misc_feature <77662..77886
/locus_tag="NGR_b00860"
/note="Usp: Universal stress protein family. The universal
stress protein Usp is a small cytoplasmic bacterial
protein whose expression is enhanced when the cell is
exposed to stress agents. Usp enhances the rate of cell
survival during prolonged exposure to...; Region:
USP_Like; cd00293"
/db_xref="CDD:30165"
misc_feature order(77791..77796,77800..77805,77833..77844)
/locus_tag="NGR_b00860"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30165"
gene 77944..78252
/locus_tag="NGR_b00870"
/note="partial transposase/integrase"
/pseudo
/db_xref="GeneID:7789626"
gene 78243..78512
/locus_tag="NGR_b00880"
/db_xref="GeneID:7789627"
CDS 78243..78512
/locus_tag="NGR_b00880"
/codon_start=1
/transl_table=11
/product="transposase number 1 for insertion sequence
NGRIS-4d"
/protein_id="YP_002822311.1"
/db_xref="GI:227818340"
/db_xref="GeneID:7789627"
/translation="MRIEFEVTHPFHPWRGQRFVLSTRKQNWGEDRVMFYDADGRLRS
LLASWTDVAAPDVFIQIAAGRSFVRPDDLATLAALIEQIERSHGG"
gene 78703..79152
/locus_tag="NGR_b00890"
/db_xref="GeneID:7789628"
CDS 78703..79152
/locus_tag="NGR_b00890"
/codon_start=1
/transl_table=11
/product="transposase number 2 for insertion sequence
NGRIS-4d"
/protein_id="YP_002822312.1"
/db_xref="GI:227818341"
/db_xref="GeneID:7789628"
/translation="MPNETKRERLRELGALNARPEAVRAPWFRESTFFDPLDLVQVKY
EMLRHVQEDGVNKADAAALFGLSRPTYYQAEAAFERDGIAGLLPRTRGPKSAHKLTDE
VMQLIEQNQHAGAPLQARSLAELLHSTLGISVHPRSIERAIARKKKR"
misc_feature 78829..78984
/locus_tag="NGR_b00890"
/note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
/db_xref="CDD:205696"
misc_feature 78859..79137
/locus_tag="NGR_b00890"
/note="Winged helix-turn helix; Region: HTH_29; pfam13551"
/db_xref="CDD:205729"
misc_feature 78910..79131
/locus_tag="NGR_b00890"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
gene 79428..81512
/locus_tag="NGR_b00900"
/db_xref="GeneID:7789629"
CDS 79428..81512
/locus_tag="NGR_b00900"
/codon_start=1
/transl_table=11
/product="transposase number 4 for insertion sequence
NGRIS-4d"
/protein_id="YP_002822313.1"
/db_xref="GI:227818342"
/db_xref="GeneID:7789629"
/translation="MSTDIAIKVDADHLRRDAFLYVRQSSLRQVFENTESTKRQYALR
DRAVALGWPIERVHVIDSDLGLSGAQSQDRDGFQHLVSEVAMGHAGIVLGLEVSRLAR
NNADWHRLLELAALSRTLIMDEDGVYDPAYFNDRMLLGLKGTMSEAELHILKSRLQGG
ILNKARRGELEMPLPIGLVYTPDARVVLDPDRQIQDTVRLLFDTFRQTGSACAVVRRL
RGEKILFPRRIRRGIGKGDVLWNEIDHSRVLQILHNPRYAGAFAYGRTRTAYNAKLKP
VQLRVARSDWQVLIPDAHDGYISWAEYERNQAALEQNATGFSPGLRGRMPRQGSGLLQ
GRLLCGRCGARMRVHYEPFEGRLRPYYVCNEAVVRHAGKHCQWVRGAPVDEAVSALLL
EVMAPAAIDVALAVQQEITQRVEQAAALRGTQLQRARYEAELARRRYLKVDPDNRLVA
DALEADWNARLRDLDALQREHERQNEADHSLLDEPAQQRIRALTADFPRIWNDERTGA
VERKRMLGLLIEDVTLLVDDEVNINIRWRGGRTQSLSVARPRPMSVIRKTPAQVVALI
NELLEATNDRQIAARLNELGHRNWRGEPFTPKKVMLVRRTYGLKSRYERLREGGMLTG
EEVAQQLGVCESTVHQLGRKGTLKRHRYASNHRYLYEPPGNVRLEKGAGSRYGGRQPR
LIVAQPLQQGAS"
misc_feature 79473..80186
/locus_tag="NGR_b00900"
/note="Site-specific recombinases, DNA invertase Pin
homologs [DNA replication, recombination, and repair];
Region: PinR; COG1961"
/db_xref="CDD:32144"
misc_feature 79485..79907
/locus_tag="NGR_b00900"
/note="Serine Recombinase family, catalytic domain; a DNA
binding domain may be present either N- or C-terminal to
the catalytic domain. These enzymes perform site-specific
recombination of DNA molecules by a concerted, four-strand
cleavage and rejoining...; Region: Ser_Recombinase;
cd00338"
/db_xref="CDD:58115"
misc_feature order(79494..79496,79500..79502,79719..79724,79731..79733)
/locus_tag="NGR_b00900"
/note="catalytic residues [active]"
/db_xref="CDD:58115"
misc_feature 79500..79502
/locus_tag="NGR_b00900"
/note="catalytic nucleophile [active]"
/db_xref="CDD:58115"
misc_feature 80016..80366
/locus_tag="NGR_b00900"
/note="Recombinase; Region: Recombinase; pfam07508"
/db_xref="CDD:203658"
misc_feature 81288..>81401
/locus_tag="NGR_b00900"
/note="Helix-turn-helix domain; Region: HTH_17; pfam12728"
/db_xref="CDD:205047"
gene complement(81747..81926)
/locus_tag="NGR_b00910"
/note="partial transposase/integrase"
/pseudo
/db_xref="GeneID:7789630"
gene 82920..83684
/locus_tag="NGR_b00920"
/db_xref="GeneID:7789631"
CDS 82920..83684
/locus_tag="NGR_b00920"
/codon_start=1
/transl_table=11
/product="rhomboid family protein"
/protein_id="YP_002822314.1"
/db_xref="GI:227818343"
/db_xref="GeneID:7789631"
/translation="MLPVRDAIPTRYPPTVVWTLIAANILVFLFQISLPPRAEEVFLF
SYGLIPSRYFGELKLSYPPQDLSDYLPFVSNMFLHGGWLHLILNMWTLWVFGPAVEDR
VGLARFAMFYLVCGLVASSVHAIANPNSVIPAVGASGAIAGVIGCYARMFPFARLVMI
VPILFIPLFFEIPALGFAAIWFLMQVIPGVFSLGQLSDVGGVAWWAHIGGFIAGWILA
PVLRRARRTYRKYYPDEGVYGFLPDGRRQEGRGPWG"
misc_feature 82920..83612
/locus_tag="NGR_b00920"
/note="Membrane associated serine protease [Amino acid
transport and metabolism]; Region: COG0705"
/db_xref="CDD:31049"
gene 83675..84502
/locus_tag="NGR_b00930"
/db_xref="GeneID:7789632"
CDS 83675..84502
/locus_tag="NGR_b00930"
/codon_start=1
/transl_table=11
/product="serine protease"
/protein_id="YP_002822315.1"
/db_xref="GI:227818344"
/db_xref="GeneID:7789632"
/translation="MGVMDLLWIFLMITAMQPVLHRRYLEAMRIRKIAQVEKKRESRV
ILLVHRQETMGFLGFPLMRYIDINDSEEVLRAVQMTDDDVPLDLVLHTPGGLVLAALQ
IARAVRNHKGKVTVFVPHYAMSGGTLIALAADEIVMCRHSVLGPIDPQLGQMPAASII
KVAEQKPLAEVDDHTLIMADIGRKAIRQVEAAAAALLSRHMDEDASRTLAAKLASGTW
THDYPISPEEAKVMGLLVSTDIPNEVLELMTLYPQPVRQQRGVEYLPFPRQRELRHR"
misc_feature 83678..84475
/locus_tag="NGR_b00930"
/note="Serine dehydrogenase proteinase; Region: SDH_sah;
pfam01972"
/db_xref="CDD:110924"
misc_feature 83936..>84121
/locus_tag="NGR_b00930"
/note="Caseinolytic protease (ClpP) is an ATP-dependent
protease; Region: Clp_protease_like; cl15763"
/db_xref="CDD:210163"
misc_feature 84044..84046
/locus_tag="NGR_b00930"
/note="active site"
/db_xref="CDD:132923"
gene 84653..85711
/locus_tag="NGR_b00940"
/db_xref="GeneID:7789633"
CDS 84653..85711
/locus_tag="NGR_b00940"
/codon_start=1
/transl_table=11
/product="ATPase"
/protein_id="YP_002822316.1"
/db_xref="GI:227818345"
/db_xref="GeneID:7789633"
/translation="MANGKCDICGMPATVRAQVVSSGRRQNMELCDEHYRQLARQSRG
RSASPLEELFGRSGSLFEDFFGDSLFPGAGFGSEEEGGRTSAPVHRGGRKGPAALADR
LSEQAEKILQEAAHKSVEFGRREVDTEHLLWALADSEVVRTILNQFKVSSDDLRQQIE
KEARRGQAKPDEEESEIGVSPRVKDALSRAFVTSNELGHTYVGPEHLLIGLTEEGEGL
AADLLKRYGLTPQALRQQVTKVVGRGAEEGRVEAPSTTPDLDKYSRDLTKMAREGKLD
PVIGRAKEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVTGEVPEALREKC
ALRKNWTLIPLNPGQQFH"
misc_feature 84956..>85651
/locus_tag="NGR_b00940"
/note="ATP-binding subunits of Clp protease and DnaK/DnaJ
chaperones [Posttranslational modification, protein
turnover, chaperones]; Region: clpA; COG0542"
/db_xref="CDD:30888"
misc_feature 84986..85138
/locus_tag="NGR_b00940"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:202433"
misc_feature 85238..85378
/locus_tag="NGR_b00940"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:202433"
misc_feature 85487..>85633
/locus_tag="NGR_b00940"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 85562..85585
/locus_tag="NGR_b00940"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature 85565..85588
/locus_tag="NGR_b00940"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
gene complement(85758..86549)
/locus_tag="NGR_b00950"
/db_xref="GeneID:7789634"
CDS complement(85758..86549)
/locus_tag="NGR_b00950"
/codon_start=1
/transl_table=11
/product="transposase number 2 for insertion sequence
NGRIS-3d"
/protein_id="YP_002822317.1"
/db_xref="GI:227818346"
/db_xref="GeneID:7789634"
/translation="MKEARMLTNPTLDQMQALGLTGMAAAWRELTEQSGTNELSRDEW
LGLMLDREVTLRADKRIRNRLASAKLRFAQACIEDIDFAAARGLDRRNTMALAQGQWL
TAHEGLIITGHTGTGKSWLACAFGRQAARLGHSVLYVRVPRMFEELALARLDGSFPRL
IDRLTRVQLLILDDFGTHTLSDQQRFHLFEIVEERYQRKSTLITAQVPVASWHDLIAD
STVADAILDRIVHNAHRITLRGESMRKQKSAPLLTGAENGEINQP"
misc_feature complement(85806..86534)
/locus_tag="NGR_b00950"
/note="DNA replication protein [DNA replication,
recombination, and repair]; Region: DnaC; COG1484"
/db_xref="CDD:31673"
misc_feature complement(86382..86468)
/locus_tag="NGR_b00950"
/note="IstB-like ATP binding N-terminal; Region:
IstB_IS21_ATP; pfam08483"
/db_xref="CDD:117060"
misc_feature complement(85941..86267)
/locus_tag="NGR_b00950"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(86193..86216)
/locus_tag="NGR_b00950"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(86031..86033,86190..86213))
/locus_tag="NGR_b00950"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(86028..86045)
/locus_tag="NGR_b00950"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
gene complement(86546..88096)
/locus_tag="NGR_b00960"
/db_xref="GeneID:7789635"
CDS complement(86546..88096)
/locus_tag="NGR_b00960"
/codon_start=1
/transl_table=11
/product="transposase number 1 for insertion sequence
NGRIS-3d"
/protein_id="YP_002822318.1"
/db_xref="GI:227818347"
/db_xref="GeneID:7789635"
/translation="MPRRKQARRTTVRDIRTILRLTHEEGLSVREIAERLKIGKSSVS
TYLLRSREAGLSWPLPIGADEDAKLERRLFGRAGRPPRDLSEPDWALVVRELKRKGVT
LTLLWQEYRASHPDGYGFTWFCEQVAAFRQRTSVAFRNRHAAGAVMQTDYAGPTVPVI
DPATGVIHPAQIFVAVLGASNLTFAHASFSQQLPDWIDGQVRALTFYGGVTKAIVCDN
LKSGVAKALWFEPTLTATFAAMAEHYDTTILPTRSRKPRDKGRVEGAVLIVERWILAR
LRNRTFFSLAALNTAIAELLEDLNNRTMRHVGKSRRELFEEIERPALKPLPAIPFEYA
EWKSAKVHPDYHVEVDKTFYSVPHRLIGCTLQVRLTHRVVEIFHDHQRVASHVRRSQR
SGHVTVNDHMPKAHQRYANTTPANLIGRATQIGPNAAILVERMMRDRPHPEQGYRSAM
GILSLAPRYGSQRLEAACERALTINAITYSSVASILKSGLDRERPQAEHAAPTPAHTN
IRGRSYYQ"
misc_feature complement(87941..>88051)
/locus_tag="NGR_b00960"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(87941..>88051)
/locus_tag="NGR_b00960"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:211770"
misc_feature complement(order(87944..87946,87950..87955,87959..87967,
87971..87976,87980..87982,88010..88015,88031..88033))
/locus_tag="NGR_b00960"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
misc_feature complement(87146..87994)
/locus_tag="NGR_b00960"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG4584"
/db_xref="CDD:34222"
misc_feature complement(87278..87583)
/locus_tag="NGR_b00960"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
misc_feature complement(86552..87316)
/locus_tag="NGR_b00960"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG4584"
/db_xref="CDD:34222"
gene 88309..90096
/locus_tag="NGR_b00970"
/db_xref="GeneID:7789636"
CDS 88309..90096
/locus_tag="NGR_b00970"
/codon_start=1
/transl_table=11
/product="ATPase AAA"
/protein_id="YP_002822319.1"
/db_xref="GI:227818348"
/db_xref="GeneID:7789636"
/translation="MVAGSKYRGEFEERVQQILKEVTDNRNDLVLFIDEIHTIVGAGQ
GGGEGGLDIANVFKPALARGELNLIGATTLNEYQKHIEKDAALERRFQPVLVPEPTVA
QAIMILRGLRDTLEAHHKVTITDEAIIAAVELSDRYVTGRFLPDKGIDLIDQAAARVK
ISATARPVDLQELEAEVQQLKREQDYASSRKHFDKASELKAQVETKQGELDALTETWK
RDRATGSAEVRSEHVAQVVSKLTGIPVTELTVEERERLVRMEEKLHERVIGQEEAIKA
VSDAVRLARAGLREGRKPVATFLFLGPTGVGKTELAKALAEIVYGDEDAMVRLDMSEY
MERHTVARLVGAPPGYVGYEEGGQLTERVRRRPYTVVLLDEIEKAHPDVYNVLLQVFD
DGRLTDGKGRMVDFTNTIIIATSNLGSDIIQRNLRLRGSAAEDPGKLKRELMEVLRGH
FRPEFINRIDEIIVFQSLSREEIKAIVELQLERVKRTAHGQGIELEIDASLIDYLASE
GYRPEFGARELRRLIRSELETELARAMLAGEATDGAKVIARWDSTHDKIAFKIEPAKD
TAAPKSILPETKRRTRTKPESEGSRPSVH"
misc_feature <88309..89994
/locus_tag="NGR_b00970"
/note="ATP-binding subunits of Clp protease and DnaK/DnaJ
chaperones [Posttranslational modification, protein
turnover, chaperones]; Region: clpA; COG0542"
/db_xref="CDD:30888"
misc_feature <88309..88605
/locus_tag="NGR_b00970"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 88396..88413
/locus_tag="NGR_b00970"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 88576..88578
/locus_tag="NGR_b00970"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 89110..89595
/locus_tag="NGR_b00970"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 89212..89235
/locus_tag="NGR_b00970"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(89215..89238,89428..89430,89554..89556)
/locus_tag="NGR_b00970"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 89416..89433
/locus_tag="NGR_b00970"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 89710..89949
/locus_tag="NGR_b00970"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; pfam10431"
/db_xref="CDD:204486"
gene 90349..90996
/locus_tag="NGR_b00980"
/db_xref="GeneID:7789637"
CDS 90349..90996
/locus_tag="NGR_b00980"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822320.1"
/db_xref="GI:227818349"
/db_xref="GeneID:7789637"
/translation="MVARSMGGWGAGGFPNRRREAWHPDQEEENDSLSAPGRNGASSS
GVNAPSAISCSASSLTAIFVLSSPGPSASRERPASRCRCKRQRKPVRQNLLTVEDEKQ
IHRCTSCGFPSDRALEVSTLDLPFERKQRLLDLVETGGPVVLRHAFVGCLVGQVFDPG
PVHQDRALGFEREPQVKDHVHGRGPTFRAGRIVAGCRCVEGAPVAFLKRHEPEPF"
gene complement(90670..91413)
/locus_tag="NGR_b00990"
/db_xref="GeneID:7789638"
CDS complement(90670..91413)
/locus_tag="NGR_b00990"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822321.1"
/db_xref="GI:227818350"
/db_xref="GeneID:7789638"
/translation="MEIVKQVEEARKPQVPGAQPSNDNRHKPLSMMRSFFPSDAVARI
FKPSRSVMTSGKARTNGWRLVFDRRSAPFIEPLMGYTGDRDTLTQVELDFPTRESAIR
YAERQGLTYVVQAPAGQVADQVGRQAGSATHAFSDATLERLGLMSLQESYGRALDTAA
TGNDPSSPESWASPMDVVFDLGLSLEAKRSILMNWAWIEYLPDQATNEGMPENNRPSR
LDEVEQALLALEREVEGRDLQGTIARKAA"
misc_feature complement(<91066..91290)
/locus_tag="NGR_b00990"
/note="ETC complex I subunit conserved region; Region:
ETC_C1_NDUFA4; pfam04800"
/db_xref="CDD:113566"
gene complement(91417..91680)
/locus_tag="NGR_b01000"
/note="truncated heat shock protein"
/pseudo
/db_xref="GeneID:7789639"
gene complement(91905..92423)
/locus_tag="NGR_b01010"
/db_xref="GeneID:7789640"
CDS complement(91905..92423)
/locus_tag="NGR_b01010"
/codon_start=1
/transl_table=11
/product="heat shock protein, hsp20 family"
/protein_id="YP_002822322.1"
/db_xref="GI:227818351"
/db_xref="GeneID:7789640"
/translation="MRTTFNFTPLFRSSIGFDRMLNALEAASRVESIYSWPPYDIAKT
GEDDYRITMAVAGFSQDEMAITQEQYMLMVSGQNADADDGQYLHRGIASRAFQRRFQL
ADHVKVVGASLANGLLTIGLKRELPEEMKPRRIEITTRKALPKVETKQIEAEKQVACT
FPTAQFAHGAGR"
misc_feature complement(92013..92423)
/locus_tag="NGR_b01010"
/note="Molecular chaperone (small heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: IbpA; COG0071"
/db_xref="CDD:30420"
misc_feature complement(92052..92315)
/locus_tag="NGR_b01010"
/note="Alpha-crystallin domain (ACD) found in Escherichia
coli inclusion body-associated proteins IbpA and IbpB, and
similar proteins. IbpA and IbpB are 16 kDa small heat
shock proteins (sHsps). sHsps are molecular chaperones
that suppress protein aggregation...; Region:
ACD_IbpA-B_like; cd06470"
/db_xref="CDD:107227"
misc_feature complement(order(92073..92078,92130..92132,92253..92258,
92262..92264,92268..92270,92295..92309))
/locus_tag="NGR_b01010"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:107227"
misc_feature 92417..92493
/note="NGR_b01020; temperature sensor, ROSE, RF00435"
gene complement(92633..93439)
/locus_tag="NGR_b01030"
/db_xref="GeneID:7789641"
CDS complement(92633..93439)
/locus_tag="NGR_b01030"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_002822323.1"
/db_xref="GI:227818352"
/db_xref="GeneID:7789641"
/translation="MGGNGLNKSLLDTVISSTPKWTSHARVVDQLGKAIVSGEFPVGS
ILPGDPELALRFRVSRTVLREAMKTLAARGMVVPRARIGTRVTPRKEWNLFDADILTW
HFACGVDEDFLYHLIEVRLAFETHAAALAARNATEAEIATMMRLAVAMGDANHTAEAL
AVADLKFHLAVLEASGNSFLRTVGGLIEAALVGVFKLSPPTDEKGGIDEVARNHIRIV
EEIGRRDEVGARQAMEYLIKSGGSACCERSTVHQQHGRRSACHEHSGVRS"
misc_feature complement(92720..93400)
/locus_tag="NGR_b01030"
/note="Transcriptional regulators [Transcription]; Region:
FadR; COG2186"
/db_xref="CDD:32369"
misc_feature complement(93179..93370)
/locus_tag="NGR_b01030"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature complement(order(93188..93199,93203..93208,93236..93238,
93245..93250,93254..93268,93290..93295,93299..93301,
93368..93370))
/locus_tag="NGR_b01030"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(92729..>93010)
/locus_tag="NGR_b01030"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:203742"
gene complement(93523..93750)
/locus_tag="NGR_b01040"
/db_xref="GeneID:7789642"
CDS complement(93523..93750)
/locus_tag="NGR_b01040"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822324.1"
/db_xref="GI:227818353"
/db_xref="GeneID:7789642"
/translation="MLENLARFSHRLDGRGAGRRDACSTLGRSKTNAVGVAAVLGLAM
YPLLLAEGFQAGGIFEPRRQFAPTPMLNSRA"
gene complement(93781..94194)
/locus_tag="NGR_b01050"
/db_xref="GeneID:7789643"
CDS complement(93781..94194)
/locus_tag="NGR_b01050"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822325.1"
/db_xref="GI:227818354"
/db_xref="GeneID:7789643"
/translation="MDPLKIAKQVAELVEQEADRRGISVTFCAIDAHGNLILKHRMPG
ANLISIEMSERKAYTCAALPVIKTADMTLLARPGESLYTFASVAGGRYTVLGGGVPLR
IDGTFVAGIGVSGGTTEQDVEIVEAAVARLGQVNR"
misc_feature complement(93799..94188)
/locus_tag="NGR_b01050"
/note="Domain of unknown function (DUF336); Region:
DUF336; pfam03928"
/db_xref="CDD:202813"
gene 94522..95541
/gene="rbsB"
/locus_tag="NGR_b01060"
/db_xref="GeneID:7789644"
CDS 94522..95541
/gene="rbsB"
/locus_tag="NGR_b01060"
/codon_start=1
/transl_table=11
/product="periplasmic ribose-binding protein"
/protein_id="YP_002822326.1"
/db_xref="GI:227818355"
/db_xref="GeneID:7789644"
/translation="MYQTSMGRRIVLGLIASVALAGSLAVPAQAQEMKTIGWSVAYFD
HPVYQLMMKGAEKVADEAGCKVIFADGKDDPSVQASHIDNFIAQGVDGIILTPTVSDP
LIPAVKKVNDAGIPLVMADRRMQTHGQPIKWEALVSWDMVKSGTIGGEQTVKAIGGKG
NIVVVEGTPGAGSTIDRGNAFYEVIEKYPDIKILAKIPANFNRAKGQEVTENILQRFK
PGEIDAIYYMADEMTFGGLQAIKAAGRLGEFKIISVDGQKEAMDLLRAREIDYEAIFH
PDDQAVAVRILCDIVNGRTPDLANQTYEGRKMDLVEFEGMPWVRPTVYAVDKSNAHLP
ENQGW"
misc_feature 94624..95412
/gene="rbsB"
/locus_tag="NGR_b01060"
/note="Periplasmic sugar-binding domain of active
transport systems that are members of the type I
periplasmic binding protein (PBP1) superfamily; Region:
PBP1_ABC_sugar_binding_like; cd01536"
/db_xref="CDD:107249"
misc_feature 94627..95406
/gene="rbsB"
/locus_tag="NGR_b01060"
/note="Periplasmic binding protein domain; Region:
Peripla_BP_4; pfam13407"
/db_xref="CDD:205585"
misc_feature order(94660..94662,94882..94884,95050..95052,95284..95286,
95344..95346)
/gene="rbsB"
/locus_tag="NGR_b01060"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107249"
gene 95716..97209
/gene="rbsA3"
/locus_tag="NGR_b01070"
/db_xref="GeneID:7789645"
CDS 95716..97209
/gene="rbsA3"
/locus_tag="NGR_b01070"
/EC_number="3.6.3.17"
/codon_start=1
/transl_table=11
/product="ribose/galactose/methyl galactoside import
ATP-bindingprotein"
/protein_id="YP_002822327.1"
/db_xref="GI:227818356"
/db_xref="GeneID:7789645"
/translation="MPAILEMQDIEKNFPGVKALRGVTFTIESGEVHALLGENGAGKS
TLMKILAGAQGKDAGQIRIDGRDVDISGPLHARQLGIAIIYQELSILPHLSVAENIFL
GRLPRMASMPWIVDWKLCCARARELLKQVGLDIDPLIPASRLKVADQQMVEIAKAVSE
NAKIVIMDEPTTSLTNREVETLFKTVRRLQEHGVSIVYVSHRLAEVKEICDRATVLRD
GMKIGTVNVAETTSKDWVKMMVGRDLDQLFPKMPVKRGKEALRVEGVSSQKLKNVSFS
AYEGEILGIAGLIGSGRSTLARTIFGAEARVAGSVNIGGKEAAIASPLEAISQGIALV
PEDRKLQGLVLPMTVRENITLAKLGGISRVGQLNLRRESKVAAEYVQALQISTPHIDQ
KTINLSGGNQQKVVLAKWLYSDARILIIDEPTRGIDVGARAEIYGLLQQFVEKGKSVI
IISSDLPELIGMSDRIIVMHEGRITAELAPSQFNEELIMTYASGMSH"
misc_feature 95716..97197
/gene="rbsA3"
/locus_tag="NGR_b01070"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:31325"
misc_feature 95728..96387
/gene="rbsA3"
/locus_tag="NGR_b01070"
/note="This family represents the domain I of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses...; Region: ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:72975"
misc_feature 95824..95847
/gene="rbsA3"
/locus_tag="NGR_b01070"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72975"
misc_feature order(95833..95838,95842..95850,95971..95973,96217..96222,
96316..96318)
/gene="rbsA3"
/locus_tag="NGR_b01070"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72975"
misc_feature 95962..95973
/gene="rbsA3"
/locus_tag="NGR_b01070"
/note="Q-loop/lid; other site"
/db_xref="CDD:72975"
misc_feature order(95995..96009,96160..96174)
/gene="rbsA3"
/locus_tag="NGR_b01070"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72975"
misc_feature 96205..96222
/gene="rbsA3"
/locus_tag="NGR_b01070"
/note="Walker B; other site"
/db_xref="CDD:72975"
misc_feature 96229..96240
/gene="rbsA3"
/locus_tag="NGR_b01070"
/note="D-loop; other site"
/db_xref="CDD:72975"
misc_feature 96304..96324
/gene="rbsA3"
/locus_tag="NGR_b01070"
/note="H-loop/switch region; other site"
/db_xref="CDD:72975"
misc_feature 96481..97137
/gene="rbsA3"
/locus_tag="NGR_b01070"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene 97333..98379
/locus_tag="NGR_b01080"
/db_xref="GeneID:7789646"
CDS 97333..98379
/locus_tag="NGR_b01080"
/note="permease"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter"
/protein_id="YP_002822328.1"
/db_xref="GI:227818357"
/db_xref="GeneID:7789646"
/translation="MNKREIHAKGGAADRLSAPAGASHLMGRFGDQLVPAIFLIALVI
TLSLVSPNFLSVGNFLDIARVVSIIGIMAVGMTIVILTGGIDLSVGSTFALASVVAAS
LIPGSFSDAPRILAFVLPVPFAILAGLLVGAAVGFINGFIIAKSRVEPFIVTLATMAF
VRGLTYLFTGGFPTIFRPMPPLFEWFGQGYVFGLPTPTIFFALVVLIGVWITRRTTFG
RSIYAIGGNEEASRLSGIKVQSIKIWAYTLMGALAALSGIILASRVGAAQPTAGLTYE
LDVIAGVVIGGTSLLGGRGSIMSTVLGVFILGVISNGLNIAGVPTYYQYVVKGLLLIS
AVGFDSYLRKMQRN"
misc_feature 97528..98349
/locus_tag="NGR_b01080"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature 98017..98073
/locus_tag="NGR_b01080"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene 98417..99475
/locus_tag="NGR_b01090"
/db_xref="GeneID:7789647"
CDS 98417..99475
/locus_tag="NGR_b01090"
/note="permease"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter"
/protein_id="YP_002822329.1"
/db_xref="GI:227818358"
/db_xref="GeneID:7789647"
/translation="MQAQSKAAAPLAVPQFNGLRSTLLARGGHQLIIIALIIIVGLAI
YWIQPRFLSAYSIDNILRTASIYGIVALGMTLVIITGGIDLSAGSMMALGGALAAGLL
GTAFGAANPLSFPPMVAILIALAVAASIGMLNGLAISALGMAPFVVTLGMMTVVRGLT
FIFADFTVGSVPGSPITFMDSLFSWLGSGSFGPIPTAAALFLTLAVILSIVLRFTPFG
RSIYAIGGDAEIARLAGINVPLVIVGVYALMGMLAGLGGVVQAGRLSSVSPLMGVGYE
LDIITIVVVGGASLAGGRGTVFGTVLAAILISLIDNGLTMMNVPSFYQYLVKGSVLLA
AVILDQWYQRHRAAMATA"
misc_feature 98606..99433
/locus_tag="NGR_b01090"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature 99101..99157
/locus_tag="NGR_b01090"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene 99512..101203
/locus_tag="NGR_b01100"
/db_xref="GeneID:7789648"
CDS 99512..101203
/locus_tag="NGR_b01100"
/codon_start=1
/transl_table=11
/product="gluconate dehydrogenase"
/protein_id="YP_002822330.1"
/db_xref="GI:227818359"
/db_xref="GeneID:7789648"
/translation="MGSGTPSPVDVVIVGTGATGGTAAKVLSERGLNVVGIDRGPYLT
PKDFSGDEIKYVNRNFLVPDVLLNPRTYRQDESETAELSAFSLLPQVVGGGTVHWAGW
FPRPKPSDFIQHSLHGDVPGASLADWPYSYEDLEPFLTKVEWAFGCAGLDAADRNAPY
RSRPYPNPPMPPTKFGRAFYRACQKLDINAHPIPQALVTQPFKGRKPKHLTGFWNLYG
DPSGMRSGTATTFIPEALATGNYELRTDCYVQRIVADRYGNAEGVIYLDADGAQVEQK
ASIVILAAGAIESARLLLLSATERHPDGLANSSGMLGKNATFHEYVYATGVFDREVCE
PFDGYAGHYLSGGSMQFYETDEKRGHICGSIIGASQVGHPINWMLPGRPVWGEAAKRA
DHDYFRHSMKIGMCLHDLAVESNRVDLDPTVKDAWGMPVARITHRSHSNDLALAKWQL
AKNAEILDAAGAKQVTSVSHQRCTGNTFHQHGTARMGFDPSKTVLNEWGEAHDVQNLY
VIDGSGFPTALGVNPTLTMMAHAWRACEFIADYHAKGRKFRLDRRPAARNNAGGA"
misc_feature 99539..101140
/locus_tag="NGR_b01100"
/note="Choline dehydrogenase and related flavoproteins
[Amino acid transport and metabolism]; Region: BetA;
COG2303"
/db_xref="CDD:32458"
misc_feature 100754..101113
/locus_tag="NGR_b01100"
/note="GMC oxidoreductase; Region: GMC_oxred_C; pfam05199"
/db_xref="CDD:203202"
gene 101205..101900
/locus_tag="NGR_b01110"
/db_xref="GeneID:7789649"
CDS 101205..101900
/locus_tag="NGR_b01110"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822331.1"
/db_xref="GI:227818360"
/db_xref="GeneID:7789649"
/translation="MASRAEWQRITRSVTGGPENRLFFTAHEWATIEAATARIYPTDE
TPGAREAMAVRFIDRYLSGLDYIFASADGDAFLQISGKDRDAWRIRIEKLQRRYRDGI
RRLDDVALTEFKTEFRHLDAAQQDRALEILSGSPKPTRIQVAEEGEAHVQNISDDDLD
FFAALTLHTRQGTFCDPVYGGNAGRVGWDAIGFPGPPTLASTQDCSYGHADKFLTDFD
WEDLIPHLKNRVR"
misc_feature 101277..101789
/locus_tag="NGR_b01110"
/note="Gluconate 2-dehydrogenase subunit 3; Region:
Gluconate_2-dh3; pfam13618"
/db_xref="CDD:205796"
gene 101948..102565
/locus_tag="NGR_b01120"
/db_xref="GeneID:7789650"
CDS 101948..102565
/locus_tag="NGR_b01120"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822332.1"
/db_xref="GI:227818361"
/db_xref="GeneID:7789650"
/translation="MTNHSPGNASPPTTGINPDGFMFFNATEARTLDAMTARIMPSEP
DGLGAREAGVVTYLDHAVAGYFRDLQSIYRVGLQRLDSYCLAKAGAVFAGLSVSRQDE
ILRELDAGIDVSAAGADTEGLEGDSVEPILTRFFAIVREHTIQGMFCDPIYGGNRDFV
GWKLIGFPGAQWEYTEEQMRPGFDATTIPILSLADLQRSRVFCHD"
misc_feature 102020..102454
/locus_tag="NGR_b01120"
/note="Gluconate 2-dehydrogenase subunit 3; Region:
Gluconate_2-dh3; pfam13618"
/db_xref="CDD:205796"
gene 102558..104249
/locus_tag="NGR_b01130"
/db_xref="GeneID:7789651"
CDS 102558..104249
/locus_tag="NGR_b01130"
/codon_start=1
/transl_table=11
/product="gluconate dehydrogenase"
/protein_id="YP_002822333.1"
/db_xref="GI:227818362"
/db_xref="GeneID:7789651"
/translation="MTKKKEAIVVGLGASGGIIAAALAKAGVKVTALEKGPHYPEDHF
RDKQDEIRYYTRGALVPHLSNNPITWRARGSQIARLLPWATGPLGTTEPLHLPPSIGT
GGGTLHWGGAVWRHREADFRMRSALIARYGEAAIPEGTSIVDWPFGYDELEPYYDRVE
WELGVSGQAGNINGELVAGGNPFEAPRKRGYPMPPLRSAAANSRFVEAARRLGLHPFP
QAAAIASEDYKNLKGCVYCGFCHGYPCHVNAKQTSHVTSVPEGLASGNLDIIPFARVI
QVNRDGGRVKGVSYIDAVGKVHDIEADIVVLATYSLENTRLLLQSGINANGQVGKHFM
THCFGWSTGVVPEFTNSFMGPLVGAHVVDDYTSELIPDNDLGVVWGSPITSFPGDTQP
IEASHNTPPGMRKWGSEYKEWFASSYRRIFSMHTQTSSLPYAGGYCDLDPNIKDPFGQ
PALRITHDWMPHDINSMKFFTRVKQAIAKEMGMTEFWEEPNPPPYHLSTHEVGTHRMG
LDPETSVVDPYGESHECEKLFVVGGGQFPTLPSYNPTMTIQALAFLTADRIAGKI"
misc_feature 102897..104246
/locus_tag="NGR_b01130"
/note="Choline dehydrogenase and related flavoproteins
[Amino acid transport and metabolism]; Region: BetA;
COG2303"
/db_xref="CDD:32458"
misc_feature 103851..104213
/locus_tag="NGR_b01130"
/note="GMC oxidoreductase; Region: GMC_oxred_C; pfam05199"
/db_xref="CDD:203202"
gene 104279..105001
/locus_tag="NGR_b01140"
/db_xref="GeneID:7789652"
CDS 104279..105001
/locus_tag="NGR_b01140"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_002822334.1"
/db_xref="GI:227818363"
/db_xref="GeneID:7789652"
/translation="MVTTSSVSLKGKVAFVTGASGGIGAAVAQALAAQGAKLGLASRT
GNDLGLADVVALRCDVRDPAQVKAAVAATVERFGRLDIVIANAGLGSYRPVIDTSTEE
IDEMVDVNVKGLIYTAQATIPYLCERGGDFVTLASEAGRRGLPGEAVYVASKFAQVGF
TRSLDHELRGFGIRCSNICPGGVATNFGMGRGLRTPDMPQLSEMMRSEDVAEVVLFNL
TRPPTFRILETAFRSMHEQSWG"
misc_feature 104300..104992
/locus_tag="NGR_b01140"
/note="Short-chain alcohol dehydrogenase of unknown
specificity [General function prediction only]; Region:
COG4221"
/db_xref="CDD:33946"
misc_feature 104318..104926
/locus_tag="NGR_b01140"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(104330..104332,104336..104347,104402..104410,
104450..104458,104534..104542,104603..104605,
104681..104689,104726..104728,104738..104740,
104816..104827,104831..104836)
/locus_tag="NGR_b01140"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(104606..104608,104687..104689,104726..104728,
104738..104740)
/locus_tag="NGR_b01140"
/note="active site"
/db_xref="CDD:212491"
gene 105042..106007
/locus_tag="NGR_b01150"
/db_xref="GeneID:7789653"
CDS 105042..106007
/locus_tag="NGR_b01150"
/codon_start=1
/transl_table=11
/product="sugar kinase"
/protein_id="YP_002822335.1"
/db_xref="GI:227818364"
/db_xref="GeneID:7789653"
/translation="MKKIVTIGEILVEIMAVDRGEGFTQPMSLVGPFPSGAPAIFIDQ
AARFGQPCGMVGCVGADHFGRVNLDRLKRDGVDISGIAVDSEYATGSAFVRYRHDGSR
DFVFNIKHSASGRMSLTDNARALIDGSDHLHVMGTSLFSPRIVEVVLKAVGMIKAKGG
TVSFDPNVRSEMLALPGLREALETILGQCDLFLPSGPELFLFAPGNSEVEAIGQILKK
EIKAVVVKNGSQGANYHDLGSTIRQPAFNVHEVDPTGAGDCFGATFVSCWLRGMTPGD
ALRYAAASGARAVERQGPMEGVSTLAELDTFIADTSAPLIFRSHQ"
misc_feature 105048..105977
/locus_tag="NGR_b01150"
/note="Sugar kinases, ribokinase family [Carbohydrate
transport and metabolism]; Region: RbsK; COG0524"
/db_xref="CDD:30870"
misc_feature 105048..105869
/locus_tag="NGR_b01150"
/note="2-keto-3-deoxygluconate kinase (KdgK)
phosphorylates 2-keto-3-deoxygluconate (KDG) to form
2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the
common intermediate product, that allows organisms to
channel D-glucuronate and/or D-galacturinate into the...;
Region: KdgK; cd01166"
/db_xref="CDD:29350"
misc_feature order(105147..105152,105159..105161,105315..105317,
105357..105359,105363..105365,105450..105452,
105546..105548,105804..105806,105813..105815)
/locus_tag="NGR_b01150"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29350"
misc_feature order(105717..105719,105732..105734,105777..105779,
105804..105812,105819..105821)
/locus_tag="NGR_b01150"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29350"
gene 106004..107287
/locus_tag="NGR_b01160"
/db_xref="GeneID:7789654"
CDS 106004..107287
/locus_tag="NGR_b01160"
/codon_start=1
/transl_table=11
/product="tagatose 6-phosphate kinase agaz"
/protein_id="YP_002822336.1"
/db_xref="GI:227818365"
/db_xref="GeneID:7789654"
/translation="MSKLRIATIARDRIAGDRSGITSVCTAHPIVIEAALLQGKAEGT
EVLIEATCNQVNQEGGYTGMTPAHFRRFVSGIAERVGFDPRRLILGGDHLGPNPWKHL
PAQEAMVRAEAMVDAYVRAGFTKIHLDTSMGCAGESLALANETTAERAARLASVAEAA
SGNTGSSPFYVIGTEVPVPGGALESIDNLEVTGPEAALETVDVHRKSFAAAGVSHAFE
RAVGVVVQPGVEFGNANVITYDREKAADLSAVLSKMPQFVFEAHSTDYQPAEALRALV
EDGFAILKVGPWLTFALRQALYGLDQIAQVLDAKFSEHSLCAAMERLMLREPANWQKY
YHGDATELRIQRHFSYSDRIRYYWPHPEAQAAIKRLLSFLQGRTIPETLISQYLEGLY
PAVASGQVSADAISLQLASVRRVLGIYARACRRSS"
misc_feature 106016..107275
/locus_tag="NGR_b01160"
/note="Tagatose 6 phosphate kinase; Region:
Tagatose_6_P_K; pfam08013"
/db_xref="CDD:203838"
gene 107549..108634
/locus_tag="NGR_b01170"
/db_xref="GeneID:7789655"
CDS 107549..108634
/locus_tag="NGR_b01170"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="YP_002822337.1"
/db_xref="GI:227818366"
/db_xref="GeneID:7789655"
/translation="MIAPYTAVALSTRNYAVKTTKESLENIKRINDFMDVAVMVAATD
GAPVRLIVLPEMAIQGMPMDFRAGNKEQHESAATTIPGPETEALAVKAKQFNAYIAAE
LLWVRDDDFPGHLFNVGFIINPQGEIIYRRAKATSDAYEGGALGTTNPHDIWEEWVEK
KGNGSKLDAFFPVARTEIGNIGYLICHEGAYPETARGLAMNGCEIMIRATLIEPQVMQ
GMWELQNRAHAMFNQMMVISPNLGPQVGKDGGFFDVFGGQSMIVDHKGHVLVKQPGMA
NGDSFVSTVVDVEALRRARIANGVTNWFKDLRTEQYAAIYEQPIYEKNQYLKELPQED
WLAREAKRRAGNIEKLVERGVLVRPTK"
misc_feature 107561..108475
/locus_tag="NGR_b01170"
/note="Uncharacterized subgroup of the nitrilase
superfamily (putative class 13 nitrilases); Region:
nitrilase_4; cd07582"
/db_xref="CDD:143606"
misc_feature 107621..108493
/locus_tag="NGR_b01170"
/note="Predicted amidohydrolase [General function
prediction only]; Region: COG0388"
/db_xref="CDD:30737"
misc_feature order(107711..107713,107948..107950,107960..107962,
108011..108013,108104..108109,108113..108118,
108179..108181)
/locus_tag="NGR_b01170"
/note="putative active site [active]"
/db_xref="CDD:143606"
misc_feature order(107711..107713,107948..107950,108104..108106)
/locus_tag="NGR_b01170"
/note="catalytic triad [active]"
/db_xref="CDD:143606"
misc_feature order(107951..107962,108008..108010,108029..108037,
108107..108109,108113..108127,108134..108139,
108215..108220,108224..108232,108236..108241,
108317..108322,108461..108475)
/locus_tag="NGR_b01170"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:143606"
gene 108744..109787
/gene="adhC1"
/locus_tag="NGR_b01180"
/db_xref="GeneID:7789656"
CDS 108744..109787
/gene="adhC1"
/locus_tag="NGR_b01180"
/EC_number="1.1.1.2"
/codon_start=1
/transl_table=11
/product="NADP-dependent alcohol dehydrogenase C"
/protein_id="YP_002822338.1"
/db_xref="GI:227818367"
/db_xref="GeneID:7789656"
/translation="MFHCYGYAATSSDTPLAPFSFERRDPGPKDVQIEILYCGVCHSD
LHRVRNEWGGTIYPCVPGHEMVGRVTAVGTEVTKYKVGDIAGVGVMVDSCRQCANCRD
GLEQFCDNGNTETYNSYDKHTGGHTLGGYSSHIVVDEHFVLRIPEGLDPAAVAPLLCA
GITTYSPLRRWKVGPGQKVGIVGLGGLGHMGVKIAKALGAHVVLFTTSSGKAKDAERL
GAAEVVLSTDSNAMAQQANSFDFILDTISARHDVAAYLELLRRDGTLTQVGVPVEPQP
IHAGTLVGKRRNYAGSAIGGIAETQEMLDFCAKHNIVSDVELISIDQVNEAFERMLRS
DVKYRFVIDMKTR"
misc_feature 108759..109781
/gene="adhC1"
/locus_tag="NGR_b01180"
/note="Zn-dependent alcohol dehydrogenases [General
function prediction only]; Region: AdhP; COG1064"
/db_xref="CDD:31264"
misc_feature 108759..109772
/gene="adhC1"
/locus_tag="NGR_b01180"
/note="Cinnamyl alcohol dehydrogenases (CAD); Region:
CAD1; cd05283"
/db_xref="CDD:176186"
misc_feature order(108864..108872,108879..108881,109218..109220,
109230..109232,109290..109307,109359..109364,
109374..109376,109419..109421,109476..109481,
109485..109487,109545..109550,109617..109625)
/gene="adhC1"
/locus_tag="NGR_b01180"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176186"
misc_feature order(108864..108866,108870..108872,108930..108932,
109008..109010,109218..109220,109623..109625)
/gene="adhC1"
/locus_tag="NGR_b01180"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:176186"
misc_feature order(108864..108866,108930..108932,109218..109220)
/gene="adhC1"
/locus_tag="NGR_b01180"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176186"
misc_feature order(109023..109025,109032..109034,109041..109043,
109065..109067)
/gene="adhC1"
/locus_tag="NGR_b01180"
/note="structural Zn binding site [ion binding]; other
site"
/db_xref="CDD:176186"
misc_feature order(109062..109064,109239..109241,109251..109253,
109527..109529,109542..109550,109554..109556,
109581..109583,109587..109592,109599..109622)
/gene="adhC1"
/locus_tag="NGR_b01180"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:176186"
gene complement(109989..110852)
/locus_tag="NGR_b01190"
/db_xref="GeneID:7789657"
CDS complement(109989..110852)
/locus_tag="NGR_b01190"
/note="IclR family"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_002822339.1"
/db_xref="GI:227818368"
/db_xref="GeneID:7789657"
/translation="MNLRSDSAAARRQPRARKNHKAEPASPGGNKRPAGLNRSVSRAL
DLLLDIAHNPYPQSFVDLQHQHRVPKATLHKLLFTLEALHFIRRDQETGKYSVGLAAL
EVAAAGAASPADLPFLLKPILEKLVEENNETCHLGILQGGEEIILKRLDPLEQVVRLA
LTVGRRHPAYASSGGLASMALSMTDADLEAFPEALPQLTENTIKSREELRERLAEVRA
KGYSLDMEEAYIGVRCVGVAVAVPNWPVVHISFSLPLQRAPVERLRALAKPLLAAAKE
IEKILSVTPRA"
misc_feature complement(110586..110738)
/locus_tag="NGR_b01190"
/note="IclR helix-turn-helix domain; Region: HTH_IclR;
pfam09339"
/db_xref="CDD:150115"
misc_feature complement(<110136..110390)
/locus_tag="NGR_b01190"
/note="Bacterial transcriptional regulator; Region: IclR;
pfam01614"
/db_xref="CDD:201890"
gene 111363..111914
/locus_tag="NGR_b01200"
/db_xref="GeneID:7789658"
CDS 111363..111914
/locus_tag="NGR_b01200"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822340.1"
/db_xref="GI:227818369"
/db_xref="GeneID:7789658"
/translation="MGSHSTVSQCLRASSAASEALLRWMGPLADIESAHWDLYWRLFC
AWEKVIGEDELRERLAKVRAAAHIKADLGDRPWILTDEPVNVSQVLHETIFPGPATKT
VEYHEATGRAMVWWTSAASGAFQIVQRRQSGWVNWGSNGENECPELPVGVDIKTAYGA
FAERWETVADQLETPPLVRVAAG"
gene complement(111998..113008)
/gene="glmS1"
/locus_tag="NGR_b01210"
/db_xref="GeneID:7789659"
CDS complement(111998..113008)
/gene="glmS1"
/locus_tag="NGR_b01210"
/codon_start=1
/transl_table=11
/product="glutamine-fructose-6-phosphate transaminase"
/protein_id="YP_002822341.1"
/db_xref="GI:227818370"
/db_xref="GeneID:7789659"
/translation="MLGEIKEIPAVVERQIREGAEAYRDEGLRLRRESPRFLVSCARG
SSDQAVTYFKYLVETGVGIPVASVGPSIASVYNATLDFAGGVCLTVSQSGGSPDLVSL
QKRAGDGGARTVALLNVTDSPVGNGAGSVLPMLAGPEKAVAATKSFVASLVALASVAA
NWTEDRALIDALVSLPESLAEALECDWSAAALPIAASQSLFTIGRGPSLGIAGEAALK
FKETCRLHAEAYSAAEVRHGPIALARDRFAALVFVNGDDADTSIRGAVQNLEAAGAKA
FVAGAQMDGGKSLPTVAVRHALLNPICRVVSFYRFVEALAVSLGENPDAPALLRKVTK
TV"
misc_feature complement(112004..113008)
/gene="glmS1"
/locus_tag="NGR_b01210"
/note="Predicted phosphosugar isomerases [Cell envelope
biogenesis, outer membrane]; Region: AgaS; COG2222"
/db_xref="CDD:32404"
misc_feature complement(112565..112900)
/gene="glmS1"
/locus_tag="NGR_b01210"
/note="SIS (Sugar ISomerase) domain repeat 1 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_1; cd05008"
/db_xref="CDD:88405"
misc_feature complement(order(112715..112717,112781..112783,
112790..112792,112805..112807,112811..112813,
112832..112837,112844..112849,112877..112882))
/gene="glmS1"
/locus_tag="NGR_b01210"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88405"
misc_feature complement(order(112730..112738,112871..112876))
/gene="glmS1"
/locus_tag="NGR_b01210"
/note="active site"
/db_xref="CDD:88405"
misc_feature complement(112007..112453)
/gene="glmS1"
/locus_tag="NGR_b01210"
/note="SIS (Sugar ISomerase) domain repeat 2 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_2; cd05009"
/db_xref="CDD:88406"
misc_feature complement(order(112010..112012,112025..112030,
112205..112210,112214..112216,112226..112231,
112280..112291,112295..112303,112307..112309,
112319..112321,112325..112327,112331..112333,
112337..112339,112349..112351,112391..112393))
/gene="glmS1"
/locus_tag="NGR_b01210"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88406"
misc_feature complement(order(112346..112348,112355..112357))
/gene="glmS1"
/locus_tag="NGR_b01210"
/note="active site"
/db_xref="CDD:88406"
gene complement(113080..113841)
/locus_tag="NGR_b01220"
/db_xref="GeneID:7789660"
CDS complement(113080..113841)
/locus_tag="NGR_b01220"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002822342.1"
/db_xref="GI:227818371"
/db_xref="GeneID:7789660"
/translation="MTANVEINRNAPVLELRDIRKTFGGITAIENFSLEVYPGEIVAL
VGDNGAGKSTLIKIISGVHPLTSGAITIEGETVAMSNATMARAHGIEVVYQDLALADQ
QTVYMNMFLGREPVNRFGLLDRRRMIDETEKLVKDLDVRIPSAHATIRDLSGGQRQGV
AIARATHWASKLILLDEPTAALGVAETAKVEEIVQSLKQRNIGVLIISHSLDQVFKLS
DRICVLRRGNQIGIRETAKTDKNEIIAMITGLQQH"
misc_feature complement(113152..113811)
/locus_tag="NGR_b01220"
/note="ABC-type branched-chain amino acid transport
systems, ATPase component [Amino acid transport and
metabolism]; Region: LivG; COG0411"
/db_xref="CDD:30760"
misc_feature complement(113149..113802)
/locus_tag="NGR_b01220"
/note="This family represents the domain I of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses...; Region: ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:72975"
misc_feature complement(113683..113706)
/locus_tag="NGR_b01220"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72975"
misc_feature complement(order(113215..113217,113311..113316,
113557..113559,113680..113688,113692..113697))
/locus_tag="NGR_b01220"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72975"
misc_feature complement(113557..113568)
/locus_tag="NGR_b01220"
/note="Q-loop/lid; other site"
/db_xref="CDD:72975"
misc_feature complement(order(113401..113403,113527..113553))
/locus_tag="NGR_b01220"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72975"
misc_feature complement(113311..113328)
/locus_tag="NGR_b01220"
/note="Walker B; other site"
/db_xref="CDD:72975"
misc_feature complement(113293..113304)
/locus_tag="NGR_b01220"
/note="D-loop; other site"
/db_xref="CDD:72975"
misc_feature complement(113209..113229)
/locus_tag="NGR_b01220"
/note="H-loop/switch region; other site"
/db_xref="CDD:72975"
gene complement(113852..115048)
/locus_tag="NGR_b01230"
/db_xref="GeneID:7789661"
CDS complement(113852..115048)
/locus_tag="NGR_b01230"
/codon_start=1
/transl_table=11
/product="amino acid racemase"
/protein_id="YP_002822343.1"
/db_xref="GI:227818372"
/db_xref="GeneID:7789661"
/translation="MFLDVLRRRNPAFIEAAMALHQQGKIPANAYVLDLDTVERNART
LSEEAHRLGLKIFAMTKQVGRSSSFCQAVKRGGIDRSVAVDMACARATHNAGLKVAHL
GHLQQIARHEAAAAARTFEPEFWTVFNDTKAAEAAAGAKQAGYRQDLLARIRAEGDTF
YRGHEGGFDANDVVAVADRLDALDGGRFAGITTFPALLFDHETRKVLPTHNLATLTKA
AEALARAGRRGVEVNAPGTNSSVMLASLAQAGATQCEPGNGLHGTTALHVMEDLPELP
AILYLTEVSHLSGGKAYCFGGGFYIDPIFPDYHVRAIVGAEPTTTAALRSVEIPPPSA
IDYYAMIDATGPNAPKPGDTAVFGFRGQAFVTRAYVVGVSGISKGTPKVKTIENGFGE
TASWPV"
misc_feature complement(113876..115048)
/locus_tag="NGR_b01230"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzymes; Region: PLPDE_III; cl00261"
/db_xref="CDD:206940"
misc_feature complement(113885..114955)
/locus_tag="NGR_b01230"
/note="Predicted amino acid racemase [Amino acid transport
and metabolism]; Region: COG3457"
/db_xref="CDD:33260"
misc_feature complement(order(114275..114286,114467..114469,
114473..114475,114593..114595,114728..114730,
114866..114868,114872..114874))
/locus_tag="NGR_b01230"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143484"
misc_feature complement(114866..114868)
/locus_tag="NGR_b01230"
/note="catalytic residue [active]"
/db_xref="CDD:143484"
gene complement(115061..115360)
/locus_tag="NGR_b01240"
/db_xref="GeneID:7789662"
CDS complement(115061..115360)
/locus_tag="NGR_b01240"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822344.1"
/db_xref="GI:227818373"
/db_xref="GeneID:7789662"
/translation="MISGGLAGLAGLLYAGRLQAAKYTLGETDLMTVIAAVIVGGTLL
NGGKGSIVGALVGSLMMGMLNNGLILMGLSVSDQMIVRGLIILAAVAVSLREKSR"
misc_feature complement(115082..>115291)
/locus_tag="NGR_b01240"
/note="Transmembrane subunit (TM) of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which are involved in the uptake of
branched-chain amino acids (AAs), as well as TMs of
transporters involved in the uptake of...; Region:
TM_PBP1_branched-chain-AA_like; cl00454"
/db_xref="CDD:200658"
gene 115523..117187
/locus_tag="NGR_b01250"
/db_xref="GeneID:7789663"
CDS 115523..117187
/locus_tag="NGR_b01250"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822345.1"
/db_xref="GI:227818374"
/db_xref="GeneID:7789663"
/translation="MLDIERPQMKKVVLGGGVITCEDGSRPDWQGVVISGDRIERLVR
RDDVAGLDGYQVEDLGDATLMPGFVDVHAHAEVVCRTAFRTIDCRAPECSSVEDVSDA
LIAGATDLDPGEWLVGQANLFFDRKLKEGRLPTRAELDRVSRDRPIALRAGGHITVLN
SEALERAGIGRGFRPPEHSITGKPEVIFGDDGEPTGVIKEMDSLLPLPRPNADELRAC
IASGLRDFFTDFGVTTIGEISETVAGIECMNDLAESGELPTSMRVYLWSPGTLDGLDK
VRNWRHHIRLTTSEKDLRIQGLKLFSDGGFSAKSAAVNCCYVGHPGSSGSIAFDQYFL
RRAFLMTREAGLQLAVHANGDRAQDWLCDMVIKLGGTEPGRSRMRIEHAGNLLPTSET
AHRWARAGIIPVPQPVFLYTFGEYFPDYLGAYGRRGRFPFRSLIEQGWRLSGSSDVWI
GSEREATNPFFSIWCCMKRQTYSGLTIDEDEALDFDTALRMHTIDAAAVLGEEDDKGS
LAPGKMADVIALECDPRKKPVDEIRRLKPTYVMSRGRTEKHAAPRH"
misc_feature 115541..117142
/locus_tag="NGR_b01250"
/note="Predicted metal-dependent hydrolase with the
TIM-barrel fold [General function prediction only];
Region: COG1574"
/db_xref="CDD:31762"
misc_feature 115613..117076
/locus_tag="NGR_b01250"
/note="YtcJ_like metal dependent amidohydrolases. YtcJ is
a Bacillus subtilis ORF of unknown function. The
Arabidopsis homolog LAF3 has been identified as a factor
required for photochrome A signalling; Region: YtcJ_like;
cd01300"
/db_xref="CDD:30043"
misc_feature order(115736..115738,115742..115744,116573..116575,
116666..116668,116861..116863)
/locus_tag="NGR_b01250"
/note="active site"
/db_xref="CDD:30043"
gene 117290..118366
/locus_tag="NGR_b01260"
/db_xref="GeneID:7789664"
CDS 117290..118366
/locus_tag="NGR_b01260"
/note="periplasmic sensory protein associated with the
TorRS two-component regulatory system"
/codon_start=1
/transl_table=11
/product="TMAO reductase system periplasmic protein TorT"
/protein_id="YP_002822346.1"
/db_xref="GI:227818375"
/db_xref="GeneID:7789664"
/translation="MKLNNTLACVAAIACLFAGSALATDKSWFPVDVESWNPPFDMNS
ARTTVQYTPTGKPAAPLNICVSVPHMKDAYWVAVDYGVTQEAKRQSVQMTVLEAGGYT
NLAKQISQIEDCVASGAQAVILGAISADGLNNLIKELSSQGIPVIDFMNGVTSKDVAA
KSLVSFREMGAGAGTYIARKHPTGSGKVKVAWFPGPAGAGWVEAGNQGFLKAVDGSDV
DVVDTRYGDTGKEVQLKLVEDALQANSDLTYIVGTAPTAEAAIEVLKQRGLTDKVKVI
SYYITPSIYEGIVKKEILAAPSDLAVIQARIAVDQAIRILEDKDYIRHAGPKLAVVDQ
ENAASFDLYSSVAPADFKPVFTVE"
misc_feature 117323..118363
/locus_tag="NGR_b01260"
/note="TMAO reductase system periplasmic protein TorT;
Provisional; Region: PRK10936"
/db_xref="CDD:182851"
misc_feature 117476..118276
/locus_tag="NGR_b01260"
/note="TorT-like proteins, a periplasmic binding protein
family that activates induction of the Tor respiratory
system upon trimethylamine N-oxide (TMAO)
electron-acceptor binding in bacteria; Region:
PBP1_TorT-like; cd06306"
/db_xref="CDD:107301"
misc_feature order(117509..117511,117737..117739,117902..117904,
118124..118126,118184..118186)
/locus_tag="NGR_b01260"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107301"
gene 118370..119920
/gene="rbsA2"
/locus_tag="NGR_b01270"
/db_xref="GeneID:7789665"
CDS 118370..119920
/gene="rbsA2"
/locus_tag="NGR_b01270"
/EC_number="3.6.3.17"
/codon_start=1
/transl_table=11
/product="ribose import ATP-binding protein rbsA"
/protein_id="YP_002822347.1"
/db_xref="GI:227818376"
/db_xref="GeneID:7789665"
/translation="MAHQLVATHDPVALAAGPPSLLTTEGLTKRYPGVTALASIDFEL
RHGEVHVLFGENGAGKSTLISLLAGAQQPTEGRIRMCGQEVSFQSVHDARAHGVRAVF
QEFSLVPQLTVEENMFLGQEFRRGPFLDKAMLRRQAREILDRLEFELRPEALVATLSR
ADQQMVEIAKAFTEGVSVLILDEPTASLTERETDRLFALIETAKRNGTGIVYITHRMA
EIRRIGDRITVLRDGRKVASLRADEANDDQLIELMTGRVIDQIYPRIAHRPERVLLEL
DRVTLANRLLRSVSLNVRAGEVVGVAGLVGSGKSNIGRAAFGLEKIEDGRIRFKGRDV
TGFSVSTMMQEGLFYVPSDRRDEGLVMMRGARENMALSALDSPSFARFGILRRSAEVK
RASDLAKHLKLRPMDLERGVEQFSGGNQQKVMIAKALAREIDLFIFDEPTVGVDVATR
TSIYELIGKLCEAGAGILLISSDLPEILNLSNRAYVMYRGELRAELSGAEITQENVLG
HFFERDAK"
misc_feature 118412..119890
/gene="rbsA2"
/locus_tag="NGR_b01270"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:31325"
misc_feature 118433..119083
/gene="rbsA2"
/locus_tag="NGR_b01270"
/note="This family represents the domain I of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses...; Region: ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:72975"
misc_feature 118529..118552
/gene="rbsA2"
/locus_tag="NGR_b01270"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72975"
misc_feature order(118538..118543,118547..118555,118697..118699,
118913..118918,119012..119014)
/gene="rbsA2"
/locus_tag="NGR_b01270"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72975"
misc_feature order(118667..118675,118697..118699)
/gene="rbsA2"
/locus_tag="NGR_b01270"
/note="Q-loop/lid; other site"
/db_xref="CDD:72975"
misc_feature order(118700..118714,118856..118870)
/gene="rbsA2"
/locus_tag="NGR_b01270"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72975"
misc_feature 118901..118918
/gene="rbsA2"
/locus_tag="NGR_b01270"
/note="Walker B; other site"
/db_xref="CDD:72975"
misc_feature 118925..118936
/gene="rbsA2"
/locus_tag="NGR_b01270"
/note="D-loop; other site"
/db_xref="CDD:72975"
misc_feature 119000..119020
/gene="rbsA2"
/locus_tag="NGR_b01270"
/note="H-loop/switch region; other site"
/db_xref="CDD:72975"
misc_feature 119180..119845
/gene="rbsA2"
/locus_tag="NGR_b01270"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene 119917..120954
/locus_tag="NGR_b01280"
/db_xref="GeneID:7789666"
CDS 119917..120954
/locus_tag="NGR_b01280"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822348.1"
/db_xref="GI:227818377"
/db_xref="GeneID:7789666"
/translation="MTSIELTHLDRRTTATAAREVMKRLFVGLGVLPFLMLAAMITFS
LMSDNFLTSRNLINVARQSSYLTIVSLGQMLALISGGIDLSVGTTLAVTSVVSAMAMV
ASLAAMPDMVGLAILIGVFAGLAAGVAMGAINGLGISLFGVNPFMMTLGMSSVGFGLA
LYLTSGIPVQGMPEAFGAILGFGTLFGVPVPIYATAVLIALVYLLLNWTRLGRYIYAV
GGNIKASRLSGIEPKRTLFKTYVLCSALTTIAGLMLTARLATGEANIGGSMPLESIAA
CVIGGVSLSGGSGRVGGVVLGAVFIGLVQNGMNLAHVDSYLQIVAIGAILILAVIADR
VRLRLASEMTN"
misc_feature 120103..120870
/locus_tag="NGR_b01280"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature 120583..120639
/locus_tag="NGR_b01280"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene 121054..122178
/locus_tag="NGR_b01290"
/db_xref="GeneID:7789667"
CDS 121054..122178
/locus_tag="NGR_b01290"
/codon_start=1
/transl_table=11
/product="monooxygenase"
/protein_id="YP_002822349.1"
/db_xref="GI:227818378"
/db_xref="GeneID:7789667"
/translation="MTINGRHAEIAGAGIAGLTTAAALAQKGWSVRVHERGEELREIG
AGIFMWENALRVLEAIGAYDEAIDGGERNQYWEIRDERERLLQSGWMMQGTRLYTILR
SQLHKALANAATRAGVEIVVNSRVSGATEDGQLLLENGQKLKADLIVGADGVNSAVRN
SLGLAKRVVDLQDGCGRYLIPRIPEDAAGRSLEYWNGGRRVGVVPASRDTVYLYVCCP
ASDHVGRLSPPDRKSWTKSFPALASYIDRLTDNGRWASFSDVTCHSWRKGNVAILGDA
AHAMSPNLGQGAGVSMQTGFVLADELSRTPEIRAALASWEARQRPVVDATQKFSRLYG
RVGTRWPRPLLDLRSAFVWGVGKSTRIQRRVNVAAHSDVT"
misc_feature 121129..122142
/locus_tag="NGR_b01290"
/note="2-polyprenyl-6-methoxyphenol hydroxylase and
related FAD-dependent oxidoreductases [Coenzyme metabolism
/ Energy production and conversion]; Region: UbiH;
COG0654"
/db_xref="CDD:30999"
misc_feature 121135..>121530
/locus_tag="NGR_b01290"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature <121855..122061
/locus_tag="NGR_b01290"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene 122240..123277
/locus_tag="NGR_b01300"
/db_xref="GeneID:7789668"
CDS 122240..123277
/locus_tag="NGR_b01300"
/codon_start=1
/transl_table=11
/product="HTH-type transcriptional regulator"
/protein_id="YP_002822350.1"
/db_xref="GI:227818379"
/db_xref="GeneID:7789668"
/translation="MPPLRCVSMRSGMSAIKRSPQTRHASLLRAGSGCEISTSDIELI
RLLQADGRISFVDLAEKLGLTEKTVRRRVGELRALELIEITTVASPRAIGYSSVALVG
IRIVGGSNRLDIAEQLFELNAVDYAVTTFGAYDILVELVCRDNRELGDLLDGAIRGMD
GVREIDIFPYLSLHYQQPAWDRTQVKEGGSRFSSNIVLDKVDREIVRCLSQDGRMPFL
EISRHIGISESQIRKRYARLLEQGAVQVLAMTNPRSIGYRTIAWVCLTVASGASITAV
GDQVSALPSVAYIALCAGKFDIMAEVMCRDPDDLFELLDKRIKSLPGISSVQTILCED
FLYRRITPIEE"
misc_feature 122357..122665
/locus_tag="NGR_b01300"
/note="helix_turn_helix ASNC type; Region: HTH_ASNC;
smart00344"
/db_xref="CDD:197668"
misc_feature 122357..122470
/locus_tag="NGR_b01300"
/note="AsnC-type helix-turn-helix domain; Region:
HTH_AsnC-type; pfam13404"
/db_xref="CDD:205582"
misc_feature 122540..122755
/locus_tag="NGR_b01300"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:189815"
misc_feature 122831..123151
/locus_tag="NGR_b01300"
/note="helix_turn_helix ASNC type; Region: HTH_ASNC;
smart00344"
/db_xref="CDD:197668"
misc_feature 122831..122953
/locus_tag="NGR_b01300"
/note="AsnC-type helix-turn-helix domain; Region:
HTH_AsnC-type; pfam13404"
/db_xref="CDD:205582"
misc_feature 123026..123232
/locus_tag="NGR_b01300"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:189815"
gene 123277..123789
/locus_tag="NGR_b01310"
/pseudo
/db_xref="GeneID:7789669"
gene complement(123959..126235)
/locus_tag="NGR_b01320"
/db_xref="GeneID:7789670"
CDS complement(123959..126235)
/locus_tag="NGR_b01320"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="YP_002822351.1"
/db_xref="GI:227818380"
/db_xref="GeneID:7789670"
/translation="MTETMENRSSENGLVGQSIARIDGPLKVTGRATYAYEHAVNGAA
YGYILGAAIAKGRIVEIDSRKAEQAPGVLHVMTHRNAPAQPEFGPAVTPTVPEVFSRA
RPMLNSDRVRFHDEPVALVLAETFEAARAAAALIDVRYEEERGAFDLPARLADAYAPR
RTNAGFETDSAVGDFDRAFAAASVTVDATYRTPYEHHNPMEPHATLAVWSGDEVTVYT
SAQTLANFQAGLASTLSIPREHVRTVSPFIGGGFGSKLIVHADTVLAALAARVLRRPV
KVALTRQQMFANAGHRAEMVQRVRLGAERDGRLTSIGHVVWSATSGFEEFCEQTAVFG
RSLYAAPNRLTRHQLVPVDLNRGEWMRSPGEAPGMLAFESAMDELAEKLGLDPIELRI
RNEPTADPEQGVPFSTRNLVACMQEGARRFGWERRNPAPGRIREDRKLIGYGMAAAIR
PNYIGAGTARVAIDANGRVTAQLDMTDIGTGTYTILAQIAAESLGVPVAAVKVELGDS
RFPRTAGSGGSWGAASAGSALHHACNALRERIMAASRTSDRSPLRGANDVAPSFADGK
VRVGNRSVSLTDLIARIAPDGIAATGSVAAARDTESYRAYSQHSYGAHFAEVAVDGDT
GEIRMRRMLSVIGAGRILNARTARSQILGGMTWGIGAALMEEAVLDPRSGHFVNHDLA
EYHVPVNGDVAEMEVVFLEEFDDKANPLGAKGLGELGVCGSGAAIANAVYNATGVRVR
EFPITLDRLLPGLPLTAI"
misc_feature complement(123974..126196)
/locus_tag="NGR_b01320"
/note="Aerobic-type carbon monoxide dehydrogenase, large
subunit CoxL/CutL homologs [Energy production and
conversion]; Region: CoxL; COG1529"
/db_xref="CDD:31718"
misc_feature complement(125807..126151)
/locus_tag="NGR_b01320"
/note="Aldehyde oxidase and xanthine dehydrogenase, a/b
hammerhead domain; Region: Ald_Xan_dh_C; smart01008"
/db_xref="CDD:198076"
misc_feature complement(124160..125749)
/locus_tag="NGR_b01320"
/note="Molybdopterin-binding domain of aldehyde
dehydrogenase; Region: Ald_Xan_dh_C2; pfam02738"
/db_xref="CDD:202368"
misc_feature complement(126245..127142)
/note="potential frameshift: common BLAST hit:
gi|150376868|ref|YP_001313464.1| molybdopterin
dehydrogenase FAD-binding"
gene complement(126245..126850)
/locus_tag="NGR_b01330"
/db_xref="GeneID:7789671"
CDS complement(126245..126850)
/locus_tag="NGR_b01330"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822352.1"
/db_xref="GI:227818381"
/db_xref="GeneID:7789671"
/translation="MPCNKRAPGSGCAALQGFNRMHAVLGASETCIAVHPSDMAVAMA
ALDAQIETTLPDGTTRTIAIGDLRRLPSATPHVETALGHGEMITAVTLPPPPPGRQLY
RKVRDRASYAFVLVSVATVVETSGDRIRSARIAIGGVAPKPWRPREAEYVLAGAAAAD
AAFSGAETALAGAVGRGGNDFKIPLAKRTLRQTLAAAAEGA"
misc_feature complement(126260..126547)
/locus_tag="NGR_b01330"
/note="CO dehydrogenase flavoprotein C-terminal domain;
Region: CO_deh_flav_C; smart01092"
/db_xref="CDD:198160"
gene complement(126858..127142)
/locus_tag="NGR_b01340"
/db_xref="GeneID:7789672"
CDS complement(126858..127142)
/locus_tag="NGR_b01340"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822353.1"
/db_xref="GI:227818382"
/db_xref="GeneID:7789672"
/translation="MQPFTYVRPGNVNEAAAAVAAVPEAMFISGGTNLLDLMKLEIER
PTHLVDISRLPLDRIEETPEGGLRIGAQVRNGDLAADPRVRSRYPLPLFL"
misc_feature complement(<126873..127142)
/locus_tag="NGR_b01340"
/note="Aerobic-type carbon monoxide dehydrogenase, middle
subunit CoxM/CutM homologs [Energy production and
conversion]; Region: CoxM; COG1319"
/db_xref="CDD:31510"
misc_feature complement(127147..127801)
/note="potential frameshift: common BLAST hit:
gi|16264661|ref|NP_437453.1| iron-sulfur-binding protein"
gene complement(127147..127500)
/gene="yagT"
/locus_tag="NGR_b01350"
/db_xref="GeneID:7789673"
CDS complement(127147..127500)
/gene="yagT"
/locus_tag="NGR_b01350"
/EC_number="1.1.1.20"
/codon_start=1
/transl_table=11
/product="xanthine dehydrogenase"
/protein_id="YP_002822354.1"
/db_xref="GI:227818383"
/db_xref="GeneID:7789673"
/translation="MNGRRINSCLSLAAQHEGDEITTIEGLADGDRLHPVQAAFVAHD
GFQCGYCTPGQICSAVGMLKEIRAGWPSHASSDVAGPAALTEAEIRERMSGNFCRCAA
YPNIVAAIRDASEEA"
misc_feature complement(127165..127434)
/gene="yagT"
/locus_tag="NGR_b01350"
/note="[2Fe-2S] binding domain; Region: Fer2_2; pfam01799"
/db_xref="CDD:201981"
gene complement(127532..127801)
/locus_tag="NGR_b01360"
/db_xref="GeneID:7789674"
CDS complement(127532..127801)
/locus_tag="NGR_b01360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822355.1"
/db_xref="GI:227818384"
/db_xref="GeneID:7789674"
/translation="MAVTDYRITRRAVLESGAATCLVLASGLPAGAAVTGGPMTAGPV
APPIPRTPMRFRINATEHALELDPRTTLLDALRNHLGLTGSKKRL"
misc_feature complement(<127541..127792)
/locus_tag="NGR_b01360"
/note="aldehyde oxidoreductase 2Fe-2S subunit;
Provisional; Region: PRK11433"
/db_xref="CDD:183134"
misc_feature complement(127935..128818)
/note="potential frameshift: common BLAST hit:
gi|150376866|ref|YP_001313462.1| helix-turn-helix
domain-containing protein"
gene complement(127935..128120)
/locus_tag="NGR_b01370"
/db_xref="GeneID:7789675"
CDS complement(127935..128120)
/locus_tag="NGR_b01370"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822356.1"
/db_xref="GI:227818385"
/db_xref="GeneID:7789675"
/translation="MPISSRNAWGGAELLLRETDLAIGAIAFRLGFSSQSRFTTTFRR
LKGITPRAYRLQFSPES"
misc_feature complement(127959..>128087)
/locus_tag="NGR_b01370"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature complement(127956..128069)
/locus_tag="NGR_b01370"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene complement(128228..128818)
/locus_tag="NGR_b01380"
/db_xref="GeneID:7789676"
CDS complement(128228..128818)
/locus_tag="NGR_b01380"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822357.1"
/db_xref="GI:227818386"
/db_xref="GeneID:7789676"
/translation="MSFKPLLGDGRIRTREEESAPLQTASWIDSSVMFDSRRWACQEA
ELHWTAPHHLIVLTDGGSTSRTSSRTERKIIYDGQDRPGILTFVPAGAERIGFYRDVD
LSYSALWIDPDLALPGLERLRDIPILVNESDAVIGTLLRSLCTEMLFGHRPDTVYVEH
LVSLVGLRTAGLGAATSGRERRPPWPSHVRARPQLH"
gene complement(129408..130121)
/locus_tag="NGR_b01390"
/db_xref="GeneID:7789677"
CDS complement(129408..130121)
/locus_tag="NGR_b01390"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="YP_002822358.1"
/db_xref="GI:227818387"
/db_xref="GeneID:7789677"
/translation="MNDFTGKNVLVLGGSRGIGAAIVRRFAKAGGNVAFTYAGSKDAA
ETLAAETGAEAIQADSANRDRLISTVADRGALDVIVINAGTLVMGDPLTLNSDDIDRM
IDVNVRAPYHASVEAARQMNDDGRIIVIGSVNGDRMPFAGGAAYALTKSAMQGMVRGL
ARDFGGRGITVNSIQPGPTDSDMNPAGGPMADTMHGFMAIKRHARGDEIAELTAYLAG
PHGAMITGSMQTIDGGFGA"
misc_feature complement(129411..130121)
/locus_tag="NGR_b01390"
/note="oxidoreductase; Provisional; Region: PRK12742"
/db_xref="CDD:183714"
misc_feature complement(129426..130097)
/locus_tag="NGR_b01390"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(129576..129581,129585..129596,
129672..129674,129684..129686,129726..129734,
129807..129809,129870..129878,129942..129950,
130011..130013,130068..130079,130083..130085))
/locus_tag="NGR_b01390"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(129672..129674,129684..129686,
129726..129728,129804..129806))
/locus_tag="NGR_b01390"
/note="active site"
/db_xref="CDD:212491"
gene 130354..131259
/locus_tag="NGR_b01400"
/db_xref="GeneID:7789678"
CDS 130354..131259
/locus_tag="NGR_b01400"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002822359.1"
/db_xref="GI:227818388"
/db_xref="GeneID:7789678"
/translation="MIKFDGIAAFVATAEAGSISAASRRLGLAKSVVSERLAELERIL
GTKLIQRTTRKLSLTENGQTFLPRAQRILREADEAAAELAARSGKLAGPLRLSAPVSF
GILHLAPALTKFIQEHPQIEVSVELDDRFVDAAAGGFDAVLRHGAIGDSRLIARRLAT
SRRLLVASPAYLEREGHPASIDELQHHCGILYSMREGDWRFSTEHGWQVVRPKAALRA
NNGLVMREAAMAGLGITLLPTFFIHEAVKSGVLVPIDVGARAEGAELFITYPRDHGAS
AKIRALADSLQRSFGNPPYWDRLAS"
misc_feature 130354..131223
/locus_tag="NGR_b01400"
/note="LysR family transcriptional regulator; Provisional;
Region: PRK14997"
/db_xref="CDD:184959"
misc_feature 130363..130542
/locus_tag="NGR_b01400"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 130627..131211
/locus_tag="NGR_b01400"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulator CrgA and its related
homologs, contains the type 2 periplasmic binding domain;
Region: PBP2_CrgA_like; cd08422"
/db_xref="CDD:176114"
misc_feature order(130657..130659,130669..130671,130786..130788,
130828..130830,130834..130836,131014..131016,
131065..131067,131146..131148)
/locus_tag="NGR_b01400"
/note="putative effector binding pocket; other site"
/db_xref="CDD:176114"
misc_feature order(130660..130665,130675..130680,130684..130689,
130696..130698,130708..130710,130714..130734,
130915..130917,130996..131010,131029..131034,
131041..131043)
/locus_tag="NGR_b01400"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176114"
gene 131548..133332
/locus_tag="NGR_b01410"
/db_xref="GeneID:7789679"
CDS 131548..133332
/locus_tag="NGR_b01410"
/codon_start=1
/transl_table=11
/product="adenylate class-3/4/guanylyl cyclase"
/protein_id="YP_002822360.1"
/db_xref="GI:227818389"
/db_xref="GeneID:7789679"
/translation="MGENRKLAAILAADVVGYSRLASADEDRILARLRALRSDLIDPT
IAVHNGRVIKRTGDGALVEFRSVVDAVRCAVEVQNAMVERNAGVPHDRRIEFRIGIHL
GDVVEESDGDLMGDGVNIASRLEGVAAPGAICMSEDAYRQVKARLDLSVTDLGSTQLK
NIVEPIRIYSLQVGAAAPSKSTAVTYAAAGRAPAASPPALSIAVLPFANMSGDAEQEY
FADGISEDIITALSKLSQLFVIARNSSFTFKGRNVNVQEVGRGLGVRYVLEGSVRKSG
SRVRITAQLIDATSGGHLWAERFDRDLTDIFAVQDDVTQQIVDALALNLREGDQQRLA
AEQTESLEAYDCFLRGREHMWRLTREQNTQARELLQRAIELDAKFVPAYAFLAVTHGL
AYINQWSQSPSKSRELAIEAATRAVALDDQYPYAHWALGVVKLHLRQHDVAIAEAERV
IALAPNLVEGYENLGNALHYAGRSAEALAYFERAMALNPYYPDLFLHFYAQAMFQLGR
YEEAVVILKRRLVRNPDTDVSRVLLAASYGHLGRFEEARGEWVEVFRINPDYSLEHRR
KVLPYKNPADFERIVDGLRKAGLTDCRL"
misc_feature 131548..132087
/locus_tag="NGR_b01410"
/note="Adenylate cyclase, family 3 (some proteins contain
HAMP domain) [Signal transduction mechanisms]; Region:
CyaA; COG2114"
/db_xref="CDD:32297"
misc_feature 131569..132060
/locus_tag="NGR_b01410"
/note="cyclase homology domain; Region: CHD; cd07302"
/db_xref="CDD:143636"
misc_feature order(131581..131583,131587..131604,131707..131709,
131713..131721,131728..131730,131881..131889,
131899..131904,131911..131916,132025..132027)
/locus_tag="NGR_b01410"
/note="nucleotidyl binding site; other site"
/db_xref="CDD:143636"
misc_feature order(131587..131589,131719..131721)
/locus_tag="NGR_b01410"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143636"
misc_feature order(131602..131604,131635..131637,131644..131649,
131656..131658,131671..131673,131707..131712,
131863..131865,131884..131895,131902..131904,
132025..132027)
/locus_tag="NGR_b01410"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143636"
misc_feature <132166..132528
/locus_tag="NGR_b01410"
/note="Predicted integral membrane protein [Function
unknown]; Region: COG5616"
/db_xref="CDD:35175"
misc_feature 132697..132912
/locus_tag="NGR_b01410"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature 132766..133014
/locus_tag="NGR_b01410"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(132772..132774,132784..132786,132793..132795,
132838..132840,132874..132876,132886..132888,
132895..132897,132940..132942,132976..132978,
132988..132990,132997..132999)
/locus_tag="NGR_b01410"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature order(132829..132834,132838..132843,132850..132855,
132931..132936,132943..132948,132955..132960)
/locus_tag="NGR_b01410"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 132832..133023
/locus_tag="NGR_b01410"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:205610"
misc_feature 132922..133224
/locus_tag="NGR_b01410"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(132922..132927,132931..132936,132943..132948,
133033..133038,133045..133050,133057..133062,
133138..133143,133150..133155,133162..133167)
/locus_tag="NGR_b01410"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 132937..133122
/locus_tag="NGR_b01410"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:205610"
misc_feature order(132940..132942,132976..132978,132988..132990,
132997..132999,133045..133047,133081..133083,
133093..133095,133102..133104,133147..133149,
133183..133185,133195..133197,133204..133206)
/locus_tag="NGR_b01410"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene 133490..133645
/locus_tag="NGR_b01420"
/db_xref="GeneID:7789680"
CDS 133490..133645
/locus_tag="NGR_b01420"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822361.1"
/db_xref="GI:227818390"
/db_xref="GeneID:7789680"
/translation="MALKRKAAVFIRPVLVAETEYRAWTQDGKLRHPSFKGIRERVDD
ATIFAMP"
misc_feature <133493..133609
/locus_tag="NGR_b01420"
/note="The Oligonucleotide/oligosaccharide binding
(OB)-fold domain of ATP-dependent DNA ligase LigD is a
DNA-binding module that is part of the catalytic core
unit; Region: OBF_DNA_ligase_LigD; cd07971"
/db_xref="CDD:153440"
gene 133718..133900
/locus_tag="NGR_b01430"
/db_xref="GeneID:7789681"
CDS 133718..133900
/locus_tag="NGR_b01430"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822362.1"
/db_xref="GI:227818391"
/db_xref="GeneID:7789681"
/translation="MEASAGGLNRGDPTADRDDNVYIADLWGAAWGIGGRPAQTEQLA
GGSRSRFPLRLSAAPC"
gene complement(133980..134198)
/locus_tag="NGR_b01440"
/db_xref="GeneID:7789682"
CDS complement(133980..134198)
/locus_tag="NGR_b01440"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822363.1"
/db_xref="GI:227818392"
/db_xref="GeneID:7789682"
/translation="MHTVDAHGGFPPSSAATAVPLWRFIPSNSRAAVFPAALFSSALI
LMGGSMRPAVHFGNAQGGRRTLVRHQQG"
gene complement(134349..136811)
/locus_tag="NGR_b01450"
/db_xref="GeneID:7789683"
CDS complement(134349..136811)
/locus_tag="NGR_b01450"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822364.1"
/db_xref="GI:227818393"
/db_xref="GeneID:7789683"
/translation="MTVGADFEAILNAIPVPIIVKDEQFRFSFLNEAACALVGRRPGD
LIGCTDYDIHPTAEADRIREMDKRVLCTGEEVSIEAEIVVTGGELRTLLTRTCRAELT
RGNTSENVIVATILDFTERRRAESELHASEEHYRSLVELHPQVPWTADPSGQVLEIGP
RWENTGFAPNEALGEGWAKATHPDDLDPVQQAWAKSLETGEPLDIEFRLAAAEGGYSW
YRSRAATRRAEDGSILRWYGTVENIDDRRKALEAAKESEARFRAIADDAPVMIWVTGE
DGADDYHSRLWLETTGQTAEQAAGKGWLNAVHPEDRNAVERAFYQAFERRKSVRMEYR
LKRAGGGSAWVIDIGQPRFATDGKFLGFVGIALDITERRNAEQERLLAQKQIHHMARH
DALTGLPNRQFLREEFERLSDQIAAGTRIAILCLDLDGFKAVNDAYGRATGDLLLRRV
AERLQNCLRQSDILCRLGGDEFVVLRVGINSNAEARLLAQQLIDVIEAPYELAGTHVD
LGVIVGLAAAPKGDQPVDELIKAADVALDRAKSGGRGTYVQYEPEMDAHLQAVQQMRV
SLRQALANGDLEVHYQPLVDLHTGKITTFEALARWPHPERDQVSPAEFIPVAEETGLI
GSLGEWILRQACTEALKWPPHVSVAVNLSPLQFRNQGLAATVGDILEETGLEASRLQL
EITESVLLDDCDGNLQILKAIRRLGVKIAIDDFGTGFSSLGYLRTFPFDKIKVDRSFI
TDLPDGRESLAIVRAVAAIGRSLGIVTTVEGVERQRQFDVIKAEGFDEAQGYLIARPL
PAEQATKLAHSAHVETSTTERG"
misc_feature complement(136428..136793)
/locus_tag="NGR_b01450"
/note="PAS domain S-box; Region: sensory_box; TIGR00229"
/db_xref="CDD:211562"
misc_feature complement(<136548..136772)
/locus_tag="NGR_b01450"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature complement(order(136551..136553,136566..136568,
136644..136655,136692..136694,136710..136712,
136722..136724))
/locus_tag="NGR_b01450"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature complement(order(136614..136619,136626..136628,
136650..136652,136662..136664))
/locus_tag="NGR_b01450"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature complement(136083..136373)
/locus_tag="NGR_b01450"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature complement(136092..136349)
/locus_tag="NGR_b01450"
/note="PAS fold; Region: PAS_3; pfam08447"
/db_xref="CDD:203948"
misc_feature complement(order(136170..136172,136185..136187,
136263..136274,136311..136313,136326..136328,
136338..136340))
/locus_tag="NGR_b01450"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature complement(order(136143..136145,136149..136151,
136233..136238,136245..136247,136269..136271,
136281..136283))
/locus_tag="NGR_b01450"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature complement(135678..136046)
/locus_tag="NGR_b01450"
/note="PAS domain S-box; Region: sensory_box; TIGR00229"
/db_xref="CDD:211562"
misc_feature complement(135705..136013)
/locus_tag="NGR_b01450"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature complement(order(135792..135794,135807..135809,
135885..135896,135933..135935,135951..135953,
135963..135965))
/locus_tag="NGR_b01450"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature complement(order(135765..135767,135771..135773,
135855..135860,135867..135869,135891..135893,
135903..135905))
/locus_tag="NGR_b01450"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature complement(135168..135641)
/locus_tag="NGR_b01450"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(135402..135404,135531..135533))
/locus_tag="NGR_b01450"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(135399..135410,135414..135416,
135480..135482,135492..135494,135504..135509,
135516..135518))
/locus_tag="NGR_b01450"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(135339..135341,135426..135428))
/locus_tag="NGR_b01450"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature complement(134406..135110)
/locus_tag="NGR_b01450"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene 137048..137311
/locus_tag="NGR_b01460"
/db_xref="GeneID:7789684"
CDS 137048..137311
/locus_tag="NGR_b01460"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822365.1"
/db_xref="GI:227818394"
/db_xref="GeneID:7789684"
/translation="MTHGFRSRHGKVLKGASADEGGFVNCVFRSVRTCRSRITKMTGR
VQCSTGSPSGLLKVERYENTVEIPCPTDVAAAIDESAGEFDQA"
gene 137229..137831
/locus_tag="NGR_b01470"
/db_xref="GeneID:7789685"
CDS 137229..137831
/locus_tag="NGR_b01470"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822366.1"
/db_xref="GI:227818395"
/db_xref="GeneID:7789685"
/translation="MKTPWKFLAQLTSRRPSTKAQESSIRRDTDPKAHESDEKHRSAL
RLSLKVAASPPAHEDDVPVDQVSVVSDQAQGEGDVAQALRSPIDAEKAQATTGSEADT
SGGEANCLAPKSVAGTKSQSKPRIKRRERRNRANPQAAAQSAVAPKHQRLQPLSSRDL
FFREATTLDEDIKMLRIQLAQKLHLQNGQLTKMLERFDVP"
gene complement(137988..138140)
/locus_tag="NGR_b01480"
/db_xref="GeneID:7789686"
CDS complement(137988..138140)
/locus_tag="NGR_b01480"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822367.1"
/db_xref="GI:227818396"
/db_xref="GeneID:7789686"
/translation="MIGRAFQDELQRRALSRQTEEAEALAAKLINACQAGVRDDLGLS
IVAGLS"
gene complement(138298..138528)
/locus_tag="NGR_b01490"
/db_xref="GeneID:7789687"
CDS complement(138298..138528)
/locus_tag="NGR_b01490"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822368.1"
/db_xref="GI:227818397"
/db_xref="GeneID:7789687"
/translation="MKIGSTSRSFSGSILASVSGCKGVAMTYDWDGKRTRRLQMLTSV
GALAIAALLFGSAMAALQSTDTDGPAVRTALR"
gene 138809..139285
/locus_tag="NGR_b01500"
/db_xref="GeneID:7789688"
CDS 138809..139285
/locus_tag="NGR_b01500"
/codon_start=1
/transl_table=11
/product="SyrB-like regulator"
/protein_id="YP_002822369.1"
/db_xref="GI:227818398"
/db_xref="GeneID:7789688"
/translation="MADESNAGPVAADVAADAEVKAPAAKKQRSPRSQKAASEPAQSK
TPAAKRRGYSEQEKKEKLKLIETQVSGGSTLKDAIKGAGISEQTYYQWKGAAKPAEPK
AAKSESKDTKSTKPLPAGDELADLVQLEEENQRLRKLLAEKLRKENTELRKRLGLD"
gene 139541..140152
/locus_tag="NGR_b01510"
/db_xref="GeneID:7789689"
CDS 139541..140152
/locus_tag="NGR_b01510"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822370.1"
/db_xref="GI:227818399"
/db_xref="GeneID:7789689"
/translation="MKTPQRRFVVEFKSGRRQPKAQTKSIWGDTDLKALARDVEETAS
HLFNSDEALGTPDSVEPRLADPVDAEPVNGLADDAGVALAAIPIADGAEVEISKHHGA
DHPAEAVVQGREIQPTAQPRTTGTETPRRRAKRAPAQTIAQNSKPGHKDRDAQIGSVD
NPVSRDELAALDADNKRLKRLLAERLREQNLWLNKKLERFNAD"
gene complement(140279..140518)
/locus_tag="NGR_b01520"
/db_xref="GeneID:7789690"
CDS complement(140279..140518)
/locus_tag="NGR_b01520"
/codon_start=1
/transl_table=11
/product="ExsI family transcriptional regulator"
/protein_id="YP_002822371.1"
/db_xref="GI:227818400"
/db_xref="GeneID:7789690"
/translation="MTNAMNNLDVATGRGRVDIGGAVKQSREAMGYSVEDLSLTCGLT
GAEITRIELGTDVDPDRLRRIAAALQVSTSTFHLV"
misc_feature complement(<140291..140467)
/locus_tag="NGR_b01520"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:31586"
misc_feature complement(140291..140461)
/locus_tag="NGR_b01520"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature complement(order(140360..140362,140435..140437,
140447..140449))
/locus_tag="NGR_b01520"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature complement(order(140363..140365,140438..140440))
/locus_tag="NGR_b01520"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature complement(order(140357..140362,140372..140374,
140381..140383,140414..140419))
/locus_tag="NGR_b01520"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene 141075..141893
/locus_tag="NGR_b01530"
/db_xref="GeneID:7789691"
CDS 141075..141893
/locus_tag="NGR_b01530"
/codon_start=1
/transl_table=11
/product="Trm23a-like transposase, amino-terminus"
/protein_id="YP_002822372.1"
/db_xref="GI:227818401"
/db_xref="GeneID:7789691"
/translation="MPAERLKMRRVREILRYRFEEGLGHKSIAVRVGAAPSTVRETLR
RLERARLSWPLGDDVSDAVLEAALYKAAGTKTGHRRSVEPDWAHVHRELKRKHVTLQI
LWDEYIGLHPDGYRYSRYCDLYRAWALKLPVTLRQDHAAGEKLFVDYAGDTVTVVIDR
LSGKTRQAHLFVAVLGASSLSFAHARWSETLPDWIECHLLALEAFGGAPALLVPDNAK
VAVIKACHFDPQVNRTYAGMAAHYGSAVLPTRPRRPRDKERTSRCTLLEWLSDN"
misc_feature 141165..141872
/locus_tag="NGR_b01530"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG4584"
/db_xref="CDD:34222"
misc_feature 141576..141881
/locus_tag="NGR_b01530"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
gene complement(141855..143939)
/locus_tag="NGR_b01540"
/db_xref="GeneID:7789692"
CDS complement(141855..143939)
/locus_tag="NGR_b01540"
/codon_start=1
/transl_table=11
/product="transposase number 4 for insertion sequence
NGRIS-4e"
/protein_id="YP_002822373.1"
/db_xref="GI:227818402"
/db_xref="GeneID:7789692"
/translation="MSTDIAIKVDADHLRRDAFLYVRQSSLRQVFENTESTKRQYALR
DRAVALGWPIERVHVIDSDLGLSGAQSQDRDGFQHLVSEVAMGHAGIVLGLEVSRLAR
NNADWHRLLELAALSRTLIMDEDGVYDPAYFNDRMLLGLKGTMSEAELHILKSRLQGG
ILNKARRGELEMPLPIGLVYTPDARVVLDPDRQIQDTVRLLFDTFRQTGSACAVVRRL
RGEKILFPRRIRRGIGKGDVLWNEIDHSRVLQILHNPRYAGAFAYGRTRTAYNAKLKP
VQLRVARSDWQVLIPDAHDGYISWAEYERNQAALEQNATGFSPGLRGRMPRQGSGLLQ
GRLLCGRCGARMRVHYEPFEGRLRPYYVCNEAVVRHAGKHCQWVRGAPVDEAVSALLL
EVMAPAAIDVALAVQQEITQRVEQAAALRGTQLQRARYEAELARRRYLKVDPDNRLVA
DALEADWNARLRDLDALQREHERQNEADHSLLDEPAQQRIRALTADFPRIWNDERTGA
VERKRMLGLLIEDVTLLVDDEVNINIRWRGGRTQSLSVARPRPMSVIRKTPAQVVALI
NELLEATNDRQIAARLNELGHRNWRGEPFTPKKVMLVRRTYGLKSRYERLREGGMLTG
EEVAQQLGVCESTVHQLGRKGTLKRHRYASNHRYLYEPPGNVRLEKGAGSRYGGRQPR
LIVAQPLQQGAS"
misc_feature complement(143181..143894)
/locus_tag="NGR_b01540"
/note="Site-specific recombinases, DNA invertase Pin
homologs [DNA replication, recombination, and repair];
Region: PinR; COG1961"
/db_xref="CDD:32144"
misc_feature complement(143460..143882)
/locus_tag="NGR_b01540"
/note="Serine Recombinase family, catalytic domain; a DNA
binding domain may be present either N- or C-terminal to
the catalytic domain. These enzymes perform site-specific
recombination of DNA molecules by a concerted, four-strand
cleavage and rejoining...; Region: Ser_Recombinase;
cd00338"
/db_xref="CDD:58115"
misc_feature complement(order(143634..143636,143643..143648,
143865..143867,143871..143873))
/locus_tag="NGR_b01540"
/note="catalytic residues [active]"
/db_xref="CDD:58115"
misc_feature complement(143865..143867)
/locus_tag="NGR_b01540"
/note="catalytic nucleophile [active]"
/db_xref="CDD:58115"
misc_feature complement(143001..143351)
/locus_tag="NGR_b01540"
/note="Recombinase; Region: Recombinase; pfam07508"
/db_xref="CDD:203658"
misc_feature complement(<141966..142079)
/locus_tag="NGR_b01540"
/note="Helix-turn-helix domain; Region: HTH_17; pfam12728"
/db_xref="CDD:205047"
gene complement(144215..144664)
/locus_tag="NGR_b01550"
/db_xref="GeneID:7789693"
CDS complement(144215..144664)
/locus_tag="NGR_b01550"
/codon_start=1
/transl_table=11
/product="transposase number 2 for insertion sequence
NGRIS-4e"
/protein_id="YP_002822374.1"
/db_xref="GI:227818403"
/db_xref="GeneID:7789693"
/translation="MPNETKRERLRELGALNARPEAVRAPWFRESTFFDPLDLVQVKY
EMLRHVQEDGVNKADAAALFGLSRPTYYQAEAAFERDGIAGLLPRTRGPKSAHKLTDE
VMQLIEQNQHAGAPLQARSLAELLHSTLGISVHPRSIERAIARKKKR"
misc_feature complement(144383..144538)
/locus_tag="NGR_b01550"
/note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
/db_xref="CDD:205696"
misc_feature complement(144230..144508)
/locus_tag="NGR_b01550"
/note="Winged helix-turn helix; Region: HTH_29; pfam13551"
/db_xref="CDD:205729"
misc_feature complement(144236..144457)
/locus_tag="NGR_b01550"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
gene complement(144855..145124)
/locus_tag="NGR_b01560"
/db_xref="GeneID:7789694"
CDS complement(144855..145124)
/locus_tag="NGR_b01560"
/codon_start=1
/transl_table=11
/product="transposase number 1 for insertion sequence
NGRIS-4e"
/protein_id="YP_002822375.1"
/db_xref="GI:227818404"
/db_xref="GeneID:7789694"
/translation="MRIEFEVTHPFHPWRGQRFVLSTRKQNWGEDRVMFYDADGRLRS
LLASWTDVAAPDVFIQIAAGRSFVRPDDLATLAALIEQIERSHGG"
gene 145271..145945
/locus_tag="NGR_b01570"
/db_xref="GeneID:7789695"
CDS 145271..145945
/locus_tag="NGR_b01570"
/codon_start=1
/transl_table=11
/product="Trm23a-like transposase, carboxy-terminus"
/protein_id="YP_002822376.1"
/db_xref="GI:227818405"
/db_xref="GeneID:7789695"
/translation="MLVDLNDTRVLRRVGRTRRQLFEEIDHPALRPLPAERYVFAEWR
IRRAGLDYHVDIDKHYYSVPYRFAREQVEARITANTIEIFHKGERIAAHRRSSGNGKH
TTTPEHMPSSHRRFADWTIERISREASAIGSDVALLCERILADRPHPEQGYRACLGII
RLVKAFERERVNAACGRALEIGARTYGSVRSILDNNLDRSPASAGTASPEPIHHSNIR
GPRYYH"
misc_feature <145328..145942
/locus_tag="NGR_b01570"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG4584"
/db_xref="CDD:34222"
gene 145957..146694
/locus_tag="NGR_b01580"
/db_xref="GeneID:7789696"
CDS 145957..146694
/locus_tag="NGR_b01580"
/note="y4pL-like"
/codon_start=1
/transl_table=11
/product="ATP-binding protein of disrupted insertion
sequence"
/protein_id="YP_002822377.1"
/db_xref="GI:227818406"
/db_xref="GeneID:7789696"
/translation="MLAHPTLDKLNAMGLTGMAKAFNELISNGESEQLSHAEWLGLLL
EREWSWRYDRKLAARLRFAKLRHQAVPEDVDYRSERGLDRALFMKLIGGDWIDAHDNL
AICGPSGVGKSWLACALGHKACRDDRSVLYQRVPRLFANLALARGDGRYARLQRTLGH
VQLLILDDWGLEPLNEQARHDLLEILEDRYGRRSTIITSQLPVSAWHEIIGNPTYADA
ILDRLVHNAHRIDLSGESLRQNQRRKS"
misc_feature 145957..146688
/locus_tag="NGR_b01580"
/note="DNA replication protein [DNA replication,
recombination, and repair]; Region: DnaC; COG1484"
/db_xref="CDD:31673"
misc_feature 146023..146112
/locus_tag="NGR_b01580"
/note="IstB-like ATP binding N-terminal; Region:
IstB_IS21_ATP; pfam08483"
/db_xref="CDD:117060"
misc_feature 146197..146562
/locus_tag="NGR_b01580"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 146272..146295
/locus_tag="NGR_b01580"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(146275..146298,146455..146457,146554..146556)
/locus_tag="NGR_b01580"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 146443..146460
/locus_tag="NGR_b01580"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
gene 147159..147347
/locus_tag="NGR_b01590"
/db_xref="GeneID:7789697"
CDS 147159..147347
/locus_tag="NGR_b01590"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822378.1"
/db_xref="GI:227818407"
/db_xref="GeneID:7789697"
/translation="MFRDACEARATLGIQDRALAVLDALLTLYPDNELCEDRSLVVFP
SNDQLSVRVHGIAGVRTA"
misc_feature 147159..>147332
/locus_tag="NGR_b01590"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
gene complement(147624..148187)
/locus_tag="NGR_b01600"
/db_xref="GeneID:7789698"
CDS complement(147624..148187)
/locus_tag="NGR_b01600"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_002822379.1"
/db_xref="GI:227818408"
/db_xref="GeneID:7789698"
/translation="MPKNRDWAGTELPDHLKPVSAIGPIVSSAHLAEGGSPGLSEVEY
GLILASHAFHRWMVRCMAAAGVAGLSPMEIMVLHTIRHRDRGKKLSDICLVLDIEDTH
VATYAIRKLEAAGLATTGRQGKEKTVRITPKGAEACGRYAQIRERLLVASTAHARPSE
ETLSEIAAVLRFLSGAYEQSARAATTL"
misc_feature complement(147627..148157)
/locus_tag="NGR_b01600"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
gene 148315..151926
/locus_tag="NGR_b01610"
/db_xref="GeneID:7789699"
CDS 148315..151926
/locus_tag="NGR_b01610"
/note="ATP-hydrolyzing"
/codon_start=1
/transl_table=11
/product="5-oxoprolinase"
/protein_id="YP_002822380.1"
/db_xref="GI:227818409"
/db_xref="GeneID:7789699"
/translation="MAGTWNFWVDRGGTFTDVIGRDPDGRLHALKVLSENPGAYRDAA
VHGIRLHLGLAAGAPVPPGLIGEVRMGTTVATNALLERKGEPMALVTTRGFRDALRIG
YQERKKIFATEIIKPEALYSEVVELDERVLADGAVERPLDEDAARSMLEALKAKGYRA
VAIVFMHAYRYPDHEAVVARLAREIDFEQVSVSHEVSPLVKYVGRGDTTVIDAYLSPV
LGRYVAQVSEELDVARSGARLMFMMSSGGLTAADLFQGKDAILSGPAGGVVGLARTGE
AAGFDRVIGFDMGGTSTDVAHFDGEYERAFETEVAGVRVRAPMMLIHTVAAGGGSVLH
FDGERFRVGPDSAGANPGPACYRNGGPLAVTDANVMLGKLMPEFFPALFGPGQNLPLD
VETVRARFAALAAEIGDGRSPEDVADGYIRIAVANMVEAIKKISVQRGYDVTRYALNC
FGGAGGQHACLVADALGMTSILLHPMSGLLSAYGMGLADIRATRQKALGVALDDAAPQ
ALAALGAGLQTDCLAELGAQGITRDRIRTHLRAHIRYAGTDTVLAAEASFPEHDSAPR
LRAEFEHLHKRRFGFIAENKPLVIDAVEVETVGGGAAEMETDGLATTAGDVAVSRQTR
IYSQGAFHDAPVALRSDIKPGQRLTGPAIIVEANQTIIVEDGWQAELTARDHIVLKRI
KPLPERTAIGTRADPVMLEIFNNLFMSIAEQMGVTLQNTAYSVNIKERLDFSCAVFDN
KGNLVANAPHMPVHLGSMDASVATAIRENPVIHPGDVFLINAPYNGGTHLPDLTVCTP
VFDDAGREIRFWVASRGHHADIGGISPGSMSPLATNIEEEGVYIDNFKLIDRGRFSEE
GLERLLNGARYPVRNILQNVNDLKAQVAANEKGVAELKKMISQFGEEVVEAYMGHVQD
NAAESVRRVLDQLSDGEFSYEMDQGCRIVAKISIDRERREATVDFTGTSAQRADNFNA
PEPVTRAAVLYVFRVLVEADIPMNAGCLRPIRIVIPDGTMLTPRYPAAVVAGNVEVSQ
AVTNCLFGAVAAQAAAQGTMNNLTFGNANYQYYETICSGAPAGPGYDGADAVHTHMTN
SRLTDPEILETRFPVVLEDFHIRKGSGGRGKWSAGDGTKRTIRARERLDFAILSGHRR
IRPFGLKGGAPGELGRNRVRRNDGRIEELPGSAHTILEAGEAFTVVTPTGGGYGEAD"
misc_feature 148315..151923
/locus_tag="NGR_b01610"
/note="5-oxoprolinase; Region: PLN02666"
/db_xref="CDD:178271"
misc_feature 148333..148869
/locus_tag="NGR_b01610"
/note="Hydantoinase/oxoprolinase N-terminal region;
Region: Hydant_A_N; pfam05378"
/db_xref="CDD:147519"
misc_feature 148927..149796
/locus_tag="NGR_b01610"
/note="Hydantoinase/oxoprolinase; Region: Hydantoinase_A;
pfam01968"
/db_xref="CDD:202069"
gene 152250..155591
/locus_tag="NGR_b01620"
/db_xref="GeneID:7789700"
CDS 152250..155591
/locus_tag="NGR_b01620"
/codon_start=1
/transl_table=11
/product="outer membrane secretion protein"
/protein_id="YP_002822381.1"
/db_xref="GI:227818410"
/db_xref="GeneID:7789700"
/translation="MPNPSQTNDEWWVNDQTPDNPYGKSEDYESFLDYLGALPRSLTP
EIAAGTLRINVYELNDHPEYKAAAIGALEMWASVTPLKFEIVDDAPFDSTTDWMEVVS
PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLY
NYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETTRWSASTPLMADIEAVIRR
FFSTVDANGVRTYQHIELNTGDNVYGFGSTQYGYQLTSSGMQHDIGFVIHDTGGTDTI
DFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADQTDYYVENGIGSSYDDILIGN
DGANTLDGRGGGDRMAGNGGDDIYFVDSWDDIVREEANGGNDTVILLSRHLKIRKIAN
VENIIYADESTTEPGDGGDETPPSVGDDTMTSIIIGGDGNDTLDGGAGDDTIFGQGGD
DLIVGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGG
DGDDTLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFYSIEN
LIGSDDRIDRFIGTAAANHFWGQGGGDYFNGGDGNDILDGGNDGDILYGEAGDDTIIG
GAGQDYLDGGSGNDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAAIRHDILA
GFENAVGSSFEDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSG
VRLGLSGGRSGGDRYVSIENLAGSGFNDRLTGNDAANVLTGQGGNDAIDGGRGDDTLL
GDFAYQGDAPPRPGMGTGYATLGPDATNNSVATAFDISNNFSLTADPDIFDSTTVLHT
TVNATGNGQGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGG
DPGSTSSRDSSLVFVVQESGPYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPP
APAQPGVAGSDTLNGGGGSDLLDGGLAADTLTGGEGEDAFRFSTELGNGNVDWIRDFR
VIDDTILLDNLIFESVGADGALALGAFYGSAGGVAHDADDRIIYDTDSGVLSYDADGA
GEVAAIQYAQLSTNLRLSAADFIII"
misc_feature 152433..152894
/locus_tag="NGR_b01620"
/note="Zinc-dependent metalloprotease. This super-family
of metalloproteases contains two major branches, the
astacin-like proteases and the adamalysin/reprolysin-like
proteases. Both branches have wide phylogenetic
distribution, and contain sub-families, which...; Region:
ZnMc; cl00064"
/db_xref="CDD:213077"
misc_feature order(152685..152690,152697..152699,152715..152717)
/locus_tag="NGR_b01620"
/note="active site"
/db_xref="CDD:58567"
gene 155718..156119
/locus_tag="NGR_b01630"
/db_xref="GeneID:7789701"
CDS 155718..156119
/locus_tag="NGR_b01630"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822382.1"
/db_xref="GI:227818411"
/db_xref="GeneID:7789701"
/translation="MKRRTDRRTVLMTVGAAAFAVVAGPAAAQSTDIRGTVTFEGGAV
IPEGHLEVYLDEPATQGSTPRRATKTRIKSDGRSKTIAFSLLPPAGSTASPTLRIIAR
LERADGWLVARGSTKVEAGSPVYVTLNTVMY"
gene complement(156184..156756)
/locus_tag="NGR_b01640"
/db_xref="GeneID:7789702"
CDS complement(156184..156756)
/locus_tag="NGR_b01640"
/codon_start=1
/transl_table=11
/product="nuclease inhibitor"
/protein_id="YP_002822383.1"
/db_xref="GI:227818412"
/db_xref="GeneID:7789702"
/translation="MDSTTLPADLICRPYRQLARNARLANARLDRACMALRPGEWEAA
RTSFFPSLKATMVHLLDADRYYIDTLRGDRPGPVNPAGSRATPAEFATERAEVDDWLV
EFCETLTPQALSRQISIPWPDRTLTETVADTLLHVLLHGQHHRGQIHAMLSGTSVPPP
QIDEFILTDNGEARVEDLAALGWNEARLTQ"
misc_feature complement(156235..156660)
/locus_tag="NGR_b01640"
/note="Mycothiol maleylpyruvate isomerase N-terminal
domain; Region: MDMPI_N; cl00986"
/db_xref="CDD:207273"
misc_feature complement(156313..156654)
/locus_tag="NGR_b01640"
/note="DinB superfamily; Region: DinB_2; pfam12867"
/db_xref="CDD:205116"
gene 156755..158662
/locus_tag="NGR_b01650"
/db_xref="GeneID:7789703"
CDS 156755..158662
/locus_tag="NGR_b01650"
/codon_start=1
/transl_table=11
/product="adenylate class-3/4/guanylyl cyclase"
/protein_id="YP_002822384.1"
/db_xref="GI:227818413"
/db_xref="GeneID:7789703"
/translation="MARSPRILGLAFCGGCSGSSQRQGAGRTTIAAETCVDSRLAILY
ILLWEGRVLERRLAAIMAADVVGYSRLIRVDEDGTLAALKSLRDELIGPKIAEHHGRV
VKLMGDGLLAEFPSVVEAVRAASEMQQAIADRNAGLPEGQRIEIRVGINLGDVAIDGD
DIYGDGVNVAARLEAMADPGSVYVSGAVHDQVRDRLELRFEDLGRQQVKNIDRPVRVW
RWLRDAAAPDRGAVLQEASLPDRPSIIVLPFNNMSRDADQEYFSDGITEDVITDLSKV
SGLFVIARNSAFVYKDKTFNVPQVCRELGVKFALEGSIRKAGNRVRVTAQLIDGSSGG
HVWAERYDRDLTDIFEVQDDITQQIVAALKVTLSAAEKSRSAEAGTRDVDAHDLFLRG
REMLRAVKKDRDMFEQATACFRQALALDPNYAAPCAGLGLAYVLDYQNHWSAAPETSL
DAAERFADEAIGKDDQDPFNHFVVSLVAMFRRNYRRWGESADRALALNPNFASALNMR
GVLHLYTGEPKLAIPDIERAMRLDPAVQQQYLHFLGTAYFVDGDYEKAATLFRDRIEV
NPTTDLSRAFLASALGHLGRLDEARRIWGELKDINPKYEHAKHVARLPFRDPSDAGKF
TDGLRKAGLVE"
misc_feature 156905..157441
/locus_tag="NGR_b01650"
/note="Adenylate cyclase, family 3 (some proteins contain
HAMP domain) [Signal transduction mechanisms]; Region:
CyaA; COG2114"
/db_xref="CDD:32297"
misc_feature 156926..157414
/locus_tag="NGR_b01650"
/note="cyclase homology domain; Region: CHD; cd07302"
/db_xref="CDD:143636"
misc_feature order(156938..156940,156944..156961,157064..157066,
157070..157078,157085..157087,157235..157243,
157253..157258,157265..157270,157379..157381)
/locus_tag="NGR_b01650"
/note="nucleotidyl binding site; other site"
/db_xref="CDD:143636"
misc_feature order(156944..156946,157076..157078)
/locus_tag="NGR_b01650"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143636"
misc_feature order(156959..156961,156992..156994,157001..157006,
157013..157015,157025..157027,157064..157069,
157220..157222,157229..157231,157238..157249,
157256..157258,157379..157381)
/locus_tag="NGR_b01650"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143636"
misc_feature 157409..157861
/locus_tag="NGR_b01650"
/note="Predicted integral membrane protein [Function
unknown]; Region: COG5616"
/db_xref="CDD:35175"
misc_feature 157787..158572
/locus_tag="NGR_b01650"
/note="FOG: TPR repeat [General function prediction only];
Region: NrfG; COG0457"
/db_xref="CDD:30805"
misc_feature 158183..158461
/locus_tag="NGR_b01650"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(158183..158185,158270..158275,158279..158284,
158291..158296,158372..158377,158387..158392,
158399..158404)
/locus_tag="NGR_b01650"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature order(158213..158215,158225..158227,158234..158236,
158279..158281,158315..158317,158327..158329,
158336..158338,158384..158386,158420..158422,
158432..158434,158441..158443)
/locus_tag="NGR_b01650"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature 158372..>158575
/locus_tag="NGR_b01650"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(158375..158380,158387..158392,158477..158482,
158486..158491,158498..158503)
/locus_tag="NGR_b01650"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature order(158384..158386,158420..158422,158432..158434,
158441..158443,158486..158488,158522..158524,
158534..158536,158543..158545)
/locus_tag="NGR_b01650"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene complement(158787..159461)
/locus_tag="NGR_b01660"
/db_xref="GeneID:7789704"
CDS complement(158787..159461)
/locus_tag="NGR_b01660"
/codon_start=1
/transl_table=11
/product="methyltransferase"
/protein_id="YP_002822385.1"
/db_xref="GI:227818414"
/db_xref="GeneID:7789704"
/translation="MIKLKQRFERPSKEEIEAIARFSPATLHEAQGRRGALSSRLKPI
DYRMKLCGPAFTVKCAPRDNIMLQVAINYAQPGDIIVVSAGEYEEAGSFGDVLANACL
AKGIGGLVTDTGVRDTLQLRELGFPVFSLSVCIKGTVKETLGATNEPILIGDEIVHPG
DIIVGDADGLVVVRRQEAGEVAKLSQAREDAEAGYIAAYKAGKSVVEVSKLEAVLKAK
GLVVED"
misc_feature complement(158853..159458)
/locus_tag="NGR_b01660"
/note="hypothetical protein; Validated; Region: PRK06201"
/db_xref="CDD:180465"
misc_feature complement(158790..159449)
/locus_tag="NGR_b01660"
/note="Demethylmenaquinone methyltransferase; Region:
Methyltransf_6; cl00480"
/db_xref="CDD:207069"
gene complement(159611..160447)
/locus_tag="NGR_b01670"
/db_xref="GeneID:7789705"
CDS complement(159611..160447)
/locus_tag="NGR_b01670"
/codon_start=1
/transl_table=11
/product="amino acid ABC transporter substrate-binding
protein"
/protein_id="YP_002822386.1"
/db_xref="GI:227818415"
/db_xref="GeneID:7789705"
/translation="MKLKSWTLGAALVATAIAGPAKADKLADITAAKVIRCGTFADVP
PFAAPDPSTREMAGFDVDLCNAIARELGVKAEIKPLSVEARVPEVKLGHVDIAVANLA
YTLSRAEQIQFSHPYYLAKEMLIVKADDPGQKKADFAGVRLASTKGSTSELAIRKNES
KPLTFQDTGSAYLAVQQGKARGLVANTMTTTKIVKESKTKGAEMRMIEEPMLFQPIGI
GMKKDEPALTAKINEILVALDTSGEINKIWEKWLGPNTEYKMTRTDKVVPITELKFEP
IP"
misc_feature complement(159686..160285)
/locus_tag="NGR_b01670"
/note="Bacterial extracellular solute-binding proteins,
family 3; Region: SBP_bac_3; pfam00497"
/db_xref="CDD:201266"
misc_feature complement(159692..160285)
/locus_tag="NGR_b01670"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cd00134"
/db_xref="CDD:29040"
misc_feature complement(order(159890..159892,159998..160000,
160127..160129,160202..160204))
/locus_tag="NGR_b01670"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29040"
misc_feature complement(order(159911..159913,159929..159931,
159941..159943))
/locus_tag="NGR_b01670"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:29040"
misc_feature complement(159791..159808)
/locus_tag="NGR_b01670"
/note="hinge residues; other site"
/db_xref="CDD:29040"
gene complement(160481..161212)
/locus_tag="NGR_b01680"
/db_xref="GeneID:7789706"
CDS complement(160481..161212)
/locus_tag="NGR_b01680"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002822387.1"
/db_xref="GI:227818416"
/db_xref="GeneID:7789706"
/translation="MIALAGVHKSYGSYEVLKGIDAEVARGEVVVICGPSGSGKSTLI
RTVNRLEEIGSGSITCDGNNIHQPMPAKELNRLRSRIGFVFQSFNLFPHLSAIDNIAM
SPIRVKDIQRDVAYAKATKLLERVGLAEKANAYPAQLSGGQQQRVAIARALAMEPPVM
LFDEPTSALDPEMVGEVLSVMKGLAADGMTMMCVTHEMGFARDVADRVWFIDQGQIVE
SAPPEEFFSRPQTARAQRFLSELRH"
misc_feature complement(160487..161212)
/locus_tag="NGR_b01680"
/note="ABC-type polar amino acid transport system, ATPase
component [Amino acid transport and metabolism]; Region:
GlnQ; COG1126"
/db_xref="CDD:31323"
misc_feature complement(160565..161209)
/locus_tag="NGR_b01680"
/note="HisP and GlnQ are the ATP-binding components of the
bacterial periplasmic histidine and glutamine permeases,
repectively. Histidine permease is a multisubunit complex
containing the HisQ and HisM integral membrane subunits
and two copies of HisP. HisP...; Region:
ABC_HisP_GlnQ_permeases; cd03262"
/db_xref="CDD:73021"
misc_feature complement(161090..161113)
/locus_tag="NGR_b01680"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73021"
misc_feature complement(order(160625..160627,160721..160726,
160955..160957,161087..161095,161099..161104))
/locus_tag="NGR_b01680"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73021"
misc_feature complement(160955..160966)
/locus_tag="NGR_b01680"
/note="Q-loop/lid; other site"
/db_xref="CDD:73021"
misc_feature complement(160769..160798)
/locus_tag="NGR_b01680"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73021"
misc_feature complement(160721..160738)
/locus_tag="NGR_b01680"
/note="Walker B; other site"
/db_xref="CDD:73021"
misc_feature complement(160703..160714)
/locus_tag="NGR_b01680"
/note="D-loop; other site"
/db_xref="CDD:73021"
misc_feature complement(160619..160639)
/locus_tag="NGR_b01680"
/note="H-loop/switch region; other site"
/db_xref="CDD:73021"
gene complement(161209..161913)
/locus_tag="NGR_b01690"
/db_xref="GeneID:7789707"
CDS complement(161209..161913)
/locus_tag="NGR_b01690"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822388.1"
/db_xref="GI:227818417"
/db_xref="GeneID:7789707"
/translation="MISDIIAIIRDYWLLLLIGQYPNGPLGGLAATLLLSILAIAFAF
PVSIALALARLSKSPFLNWPVTALVYFTRGVPLLMLILWGYFLVPLATGANVPSFLTM
LVTLVVYQGAFLSEVVRGGIVALGHGQMEASRALGHSYLGAMRYVILPQALYNVIPSI
ISVFVATIKDTTLGYVINVPDLTFAASQINNQLLTQPFQVFFILAAVYYVICWSLSRV
AIVTERRITRPRRIRP"
misc_feature complement(161281..161781)
/locus_tag="NGR_b01690"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(161287..161292,161296..161301,
161308..161313,161341..161346,161386..161391,
161398..161409,161428..161430,161437..161442,
161482..161484,161533..161535,161542..161547,
161557..161559,161563..161568,161575..161577,
161581..161583,161587..161592,161659..161661,
161665..161670,161677..161706,161710..161721,
161749..161751,161764..161769,161776..161781))
/locus_tag="NGR_b01690"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(161392..161409,161659..161703))
/locus_tag="NGR_b01690"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(161311..161313,161341..161343,
161350..161352,161389..161391,161605..161607,
161659..161661))
/locus_tag="NGR_b01690"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(161461..161463,161473..161478,
161494..161532))
/locus_tag="NGR_b01690"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(161910..162617)
/locus_tag="NGR_b01700"
/db_xref="GeneID:7789708"
CDS complement(161910..162617)
/locus_tag="NGR_b01700"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822389.1"
/db_xref="GI:227818418"
/db_xref="GeneID:7789708"
/translation="MSSFDLSEILGNPEYVSMLLLGIKMTFVVAIGSWTLAMTLALLL
LGLRYAPGPLGNAFVTAYVSYHRNVPTLVQLLLWYFGIFTLMPDPVTFWLNDHNAEAI
FAVIGLGLCQAAYFSEDLRSGMRAVSPGQMEAARALGHSYVSAMRFVMVPQGSRNALP
ALINHSVSLFKNSSLAVAIGVAELTYAVKEIENLSFRTFESYLLVTVLYLVFSLMIMA
LGAYVARRADPVRSGRA"
misc_feature complement(161937..162590)
/locus_tag="NGR_b01700"
/note="ABC-type arginine transport system, permease
component [Amino acid transport and metabolism]; Region:
ArtQ; COG4215"
/db_xref="CDD:33942"
misc_feature complement(161967..>162419)
/locus_tag="NGR_b01700"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(161967..161969,161976..161981,
161988..161993,161997..162002,162009..162014,
162042..162047,162084..162089,162096..162107,
162126..162128,162135..162140,162180..162182,
162231..162233,162240..162245,162255..162257,
162261..162266,162273..162275,162279..162281,
162285..162290,162381..162383,162387..162392,
162399..162419))
/locus_tag="NGR_b01700"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(162090..162107,162381..162419))
/locus_tag="NGR_b01700"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(162012..162014,162042..162044,
162051..162053,162087..162089,162303..162305,
162381..162383))
/locus_tag="NGR_b01700"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(162159..162161,162171..162176,
162192..162230))
/locus_tag="NGR_b01700"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(162610..163380)
/locus_tag="NGR_b01710"
/db_xref="GeneID:7789709"
CDS complement(162610..163380)
/locus_tag="NGR_b01710"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase"
/protein_id="YP_002822390.1"
/db_xref="GI:227818419"
/db_xref="GeneID:7789709"
/translation="MPFSDYRTALVTGASSGIGAAIVERFSAEGLEVHAVARSAEPLR
KLAERTGCVAHAIDVTDRAALADLTRRVEFDILVNNAGVDRPKKFLEAEDGDIDLLVD
VNLRAVLHLCRMVVPGMVTRDRGHVINISSIAGIYNFGGNSSYHATKAGVSMLSNQLR
IDAFGKRVRVTEICPGRVATDIFAHVHGDSPEIRERFIDGFELPEARDIANAIAFAVA
APVAVNIGHIEITPTLQVMGGLQTAKPQSPKSGDESRE"
misc_feature complement(162670..163380)
/locus_tag="NGR_b01710"
/note="Short-chain alcohol dehydrogenase of unknown
specificity [General function prediction only]; Region:
COG4221"
/db_xref="CDD:33946"
misc_feature complement(162805..163356)
/locus_tag="NGR_b01710"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(162838..162843,162847..162858,
162934..162936,162946..162948,162985..162993,
163072..163074,163135..163143,163204..163212,
163264..163272,163327..163338,163342..163344))
/locus_tag="NGR_b01710"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(162934..162936,162946..162948,
162985..162987,163069..163071))
/locus_tag="NGR_b01710"
/note="active site"
/db_xref="CDD:212491"
gene 163663..164568
/locus_tag="NGR_b01720"
/db_xref="GeneID:7789710"
CDS 163663..164568
/locus_tag="NGR_b01720"
/note="Nitrogen assimilationcontrol protein"
/codon_start=1
/transl_table=11
/product="Nitrogen assimilation regulatory protein nac"
/protein_id="YP_002822391.1"
/db_xref="GI:227818420"
/db_xref="GeneID:7789710"
/translation="MDTRRFKSFVVIVDTGSITRAADILHIAQPALSQQLAALEEHFG
TKLLTRSQQGVVMTDAGAEVYRHAQIILRQMDQARADVTAAGKHLAGRVSVGLTPFSS
AATLSFELLAETRRRHPGIVLHLTESVGQTYSQMLMNNRLEIALIHGAGPMKGVRFDP
LLREDFYLVAHETFGIEAGDTPVPISALEPLPFLMPPAYNFVRRAVEAAFARSRANLT
VIGEVEVIRTLTRAVGSGLGATIMPKAVADRIVSEGAGPMICRSISPRIEETLSLCVS
EFAPLSEPALAVQELLRELTERLKH"
misc_feature 163663..164547
/locus_tag="NGR_b01720"
/note="nitrogen assimilation transcriptional regulator;
Provisional; Region: PRK11233"
/db_xref="CDD:183045"
misc_feature 163672..163845
/locus_tag="NGR_b01720"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 163936..164538
/locus_tag="NGR_b01720"
/note="The C-teminal substrate binding domain of LysR-like
nitrogen assimilation control (NAC) protein, contains the
type 2 periplasmic binding fold; Region: PBP2_Nac;
cd08433"
/db_xref="CDD:176124"
misc_feature order(163984..163989,163993..163998,164005..164007,
164017..164019,164023..164043,164320..164337,
164353..164358,164362..164367)
/locus_tag="NGR_b01720"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176124"
gene complement(164642..165844)
/locus_tag="NGR_b01730"
/db_xref="GeneID:7789711"
CDS complement(164642..165844)
/locus_tag="NGR_b01730"
/note="catalyzes the formation of oxalozcetate and
L-glutamate from L-aspartate and 2-oxoglutarate"
/codon_start=1
/transl_table=11
/product="aspartate aminotransferase"
/protein_id="YP_002822392.1"
/db_xref="GI:227818421"
/db_xref="GeneID:7789711"
/translation="MPTLADRLKNVSVSASAAMTQRARDLASRGVDVVSLSSGEPDFP
TPSHAIEAAHAAALAGDTKYPPLDGTPALKAAIARKFKRDNNLDYEPGQILVSGGGKQ
VIFNAVLATCNPGDEVVIPSPAWISYADIVRFAGGVPVPVACSHENGFKLRPEDLEAA
ITPRTKWLLLNFPNNPTGAACSRQEMAAIAEVMLRHADVWIMTDDMYEHLVYDDFEFC
TIAEVEPRLYDRVLTVNGASKAYAMTGWRLGFCGGPKALISAISNVNGQNSGGTSTIT
QAAVVAVLDGPQDLLKERAAIYRKRRDFVLENLDGIDGLTCHKPEGAFYLFPSIAGLI
GKTTKAGRRIETDTDFVMALIDEQHVAIVQGAAYGMSPFFRISYATSVEKLADGCARI
AEFCSNLR"
misc_feature complement(164645..165844)
/locus_tag="NGR_b01730"
/note="aspartate aminotransferase; Provisional; Region:
PRK05764"
/db_xref="CDD:180244"
misc_feature complement(164663..165745)
/locus_tag="NGR_b01730"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature complement(order(165104..165106,165128..165133,
165137..165139,165224..165226,165320..165322,
165470..165472,165542..165550))
/locus_tag="NGR_b01730"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature complement(order(165008..165010,165017..165019,
165104..165112,165245..165247,165440..165442,
165539..165541))
/locus_tag="NGR_b01730"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature complement(165128..165130)
/locus_tag="NGR_b01730"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene complement(165902..166669)
/locus_tag="NGR_b01740"
/db_xref="GeneID:7789712"
CDS complement(165902..166669)
/locus_tag="NGR_b01740"
/codon_start=1
/transl_table=11
/product="LamB/YcsF family protein"
/protein_id="YP_002822393.1"
/db_xref="GI:227818422"
/db_xref="GeneID:7789712"
/translation="MKIDLNSDMGEGFGPYRLCDDAALMDVVSSANIACGFHAGDPET
MARMVRLAKARGVGVGAHPGFPDRLGFGRREMPVEADELRQQVLYQLGALTAIARGEG
VPVAHIGFHAAMGNMINRDPALADLIMQAIRTVDPELIVFAMPDSEIERAATRAGLRS
LTLFLADRAYDSKGQLVSRKLPNSVLKDEATVRARVRQFLEYGTVTTIDNRTIEVRAR
SILVHSDTPGSLELARIVRSEIEAAGATIAPAREVLA"
misc_feature complement(165950..166663)
/locus_tag="NGR_b01740"
/note="LamB/YcsF family of lactam utilization protein;
Region: LamB_YcsF_like; cd10787"
/db_xref="CDD:212099"
misc_feature complement(order(166001..166003,166133..166135,
166142..166144,166166..166168,166175..166177,
166322..166324,166334..166339,166343..166345,
166451..166453,166484..166486,166646..166648))
/locus_tag="NGR_b01740"
/note="putative active site [active]"
/db_xref="CDD:212099"
gene complement(166709..167707)
/locus_tag="NGR_b01750"
/db_xref="GeneID:7789713"
CDS complement(166709..167707)
/locus_tag="NGR_b01750"
/codon_start=1
/transl_table=11
/product="allophanate hydrolase subunit 2"
/protein_id="YP_002822394.1"
/db_xref="GI:227818423"
/db_xref="GeneID:7789713"
/translation="MIEVLQTGPLNTVQDLGRFGFRNAGVTSSGAMDRLALSVGNLLV
GNDEGEAALEVQTFPFRLRFGRDMTVAITGADCGARLDGRPLPPWWAIAVSAGQVLEL
DTPRRSARAYLSFAGGIDVAPVMGSRSTSLRGGFGGLDGRFLAANDRLDIGGAGTFAL
PPHGFGAKPPEAALSEHFPASDDGTLLVRAIPAGEHALFGAEEERFWTQTWKISSQSD
RTGYRLSGEPIRLASPVELRSHGVVPGVVQMPPSGEPIVQMSDANTAGGYPKIAGVIE
VDLWRLGQARIGSRIRFVQSSVAEARSAERAVEAYLEDIHHTVPMLAQALAAMARR"
misc_feature complement(166823..167635)
/locus_tag="NGR_b01750"
/note="Allophanate hydrolase subunit 2; Region: AHS2;
smart00797"
/db_xref="CDD:197878"
gene complement(167704..168414)
/locus_tag="NGR_b01760"
/db_xref="GeneID:7789714"
CDS complement(167704..168414)
/locus_tag="NGR_b01760"
/codon_start=1
/transl_table=11
/product="carboxylase"
/protein_id="YP_002822395.1"
/db_xref="GI:227818424"
/db_xref="GeneID:7789714"
/translation="MTYAQSKALSTPASISTASAEQPKISVIGTSAYLIEAPGAFDLL
AQRRIWALAHAVEPWPEIREVVPGVTNLLVILKQTPEEPAQFEARLRHEWDGARSIDL
TGKTVEIPVTYGGEHATDLASVCDYTGLTDREVVRLHWQGNYTVVALGSAPGFGYLHG
LDPRIHMPRKTVPSLRMLKGTVTIGGMQTGVSVLTGPNGWNSIGLAELPMFDPMKDPP
ALLAPGDKVRFVPERIEL"
misc_feature complement(167758..168348)
/locus_tag="NGR_b01760"
/note="Allophanate hydrolase subunit 1; Region: AHS1;
smart00796"
/db_xref="CDD:197877"
misc_feature complement(167710..168342)
/locus_tag="NGR_b01760"
/note="Allophanate hydrolase subunit 1 [Amino acid
transport and metabolism]; Region: DUR1; COG2049"
/db_xref="CDD:32232"
gene complement(168411..168866)
/locus_tag="NGR_b01770"
/db_xref="GeneID:7789715"
CDS complement(168411..168866)
/locus_tag="NGR_b01770"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822396.1"
/db_xref="GI:227818425"
/db_xref="GeneID:7789715"
/translation="MTKGRKRKSAITGQIFDPATLEKIAGWLEDAGVDSIEIETEGGR
LMRIVAGTGAAADGAGEALDASVTQDDARPAKAPIAGHFLPVHPGRDAAEATIGSTVS
PEEIIGFVGIGPLIMPIRAEDAGTLKDCVVEPGSLVGYGDTVFLIEPAQ"
misc_feature complement(168426..168641)
/locus_tag="NGR_b01770"
/note="Biotinyl_lipoyl_domains are present in
biotin-dependent carboxylases/decarboxylases, the
dihydrolipoyl acyltransferase component (E2) of 2-oxo acid
dehydrogenases, and the H-protein of the glycine cleavage
system (GCS). These domains transport CO2, acyl; Region:
Biotinyl_lipoyl_domains; cl11404"
/db_xref="CDD:213122"
misc_feature complement(168525..168527)
/locus_tag="NGR_b01770"
/note="lipoyl-biotinyl attachment site [posttranslational
modification]; other site"
/db_xref="CDD:133456"
gene complement(168863..170248)
/locus_tag="NGR_b01780"
/db_xref="GeneID:7789716"
CDS complement(168863..170248)
/locus_tag="NGR_b01780"
/codon_start=1
/transl_table=11
/product="acetyl-CoA carboxylase"
/protein_id="YP_002822397.1"
/db_xref="GI:227818426"
/db_xref="GeneID:7789716"
/translation="MIAAVEKGEIGRRFDTVLIANRGEIALRVQRACRELGLRTVMVC
SDADRDAPYRATADAFVCIGPAAPGQSYLNQAAVLLAARSAGAGAIHPGYGFLSENAG
FAEAAEAAGLVFVGPPASAIRTMGDKIAAKRAMIETGVPCVPGPDEALPDDIASITAI
ADGIGYPVIIKAAGGGGGRGMRVVHDASALKDAVSVTREEARRAFGTPELYMEKFLQH
PRHVEIQVLCDDHGNAVWLGHRDCSMQRRHQKVVEEAPAPGIPAEIAAAVGKRCADAC
QQIGYRGVGTFEFLFENGEFYFIEMNTRLQVEHPVTEMTSGIDIVCEQLRVAQGLPLT
LAQADVRAHGHAFECRINAEDPFTFAASPGRITAAEFPSGPGIRVDTHVTTGYKVSPH
YDSLIAKLIVHAPTRDQAIRRMRLALADTRIEGISTNLALHRALFEDPAFCAGETDIH
HLEKWLDERKQ"
misc_feature complement(168866..170209)
/locus_tag="NGR_b01780"
/note="acetyl-CoA carboxylase biotin carboxylase subunit;
Validated; Region: PRK08591"
/db_xref="CDD:181492"
misc_feature complement(169886..170209)
/locus_tag="NGR_b01780"
/note="Carbamoyl-phosphate synthase L chain, N-terminal
domain; Region: CPSase_L_chain; pfam00289"
/db_xref="CDD:201133"
misc_feature complement(169334..169870)
/locus_tag="NGR_b01780"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl03087"
/db_xref="CDD:207834"
misc_feature complement(168890..169207)
/locus_tag="NGR_b01780"
/note="Biotin carboxylase C-terminal domain; Region:
Biotin_carb_C; smart00878"
/db_xref="CDD:197946"
gene complement(170245..170688)
/locus_tag="NGR_b01790"
/db_xref="GeneID:7789717"
CDS complement(170245..170688)
/locus_tag="NGR_b01790"
/codon_start=1
/transl_table=11
/product="acetyl-CoA carboxylase"
/protein_id="YP_002822398.1"
/db_xref="GI:227818427"
/db_xref="GeneID:7789717"
/translation="MDLETIRTLIEFVGRSRVSELVVGENGTIVRISRDRSKRTPADP
KPQRGRQAEAPPAVDRSDRPEIQPADGRTVKAPVFGVLHRSPNPGARPFVEVGDTVEV
GQSLCIVEAMKVFNTVSAHRAGSITRIFAGDGQEVEAGEPLMEIG"
misc_feature complement(170248..170688)
/locus_tag="NGR_b01790"
/note="acetyl-CoA carboxylase biotin carboxyl carrier
protein subunit; Validated; Region: PRK06302"
/db_xref="CDD:180522"
misc_feature complement(170251..170472)
/locus_tag="NGR_b01790"
/note="The biotinyl-domain or biotin carboxyl carrier
protein (BCCP) domain is present in all biotin-dependent
enzymes, such as acetyl-CoA carboxylase, pyruvate
carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
carboxylase, geranyl-CoA carboxylase; Region:
biotinyl_domain; cd06850"
/db_xref="CDD:133459"
misc_feature complement(order(170326..170328,170347..170355,
170380..170382))
/locus_tag="NGR_b01790"
/note="carboxyltransferase (CT) interaction site; other
site"
/db_xref="CDD:133459"
misc_feature complement(170350..170352)
/locus_tag="NGR_b01790"
/note="biotinylation site [posttranslational
modification]; other site"
/db_xref="CDD:133459"
gene 170922..172031
/locus_tag="NGR_b01800"
/db_xref="GeneID:7789718"
CDS 170922..172031
/locus_tag="NGR_b01800"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822399.1"
/db_xref="GI:227818428"
/db_xref="GeneID:7789718"
/translation="MSKRSETKSSPEMLEPRTGTPSPRLTQSEFRRRFLSRFPDRAFD
GLRSELDKIAAAAWDAYEHQRKAPHTRKAGAAFKDPDYELSVDWLAARDAIHAAQQRH
VDPDGPARILLISGSSRSEHTCPGEMSKSYRLTRIAQETMDQTTGVKTTVLELHRLAS
EYGRMIHPCKACFSTSPALCHWPCSCYPNYSLGQVDDWMNEIYPMWVEAHGIMIVTPV
NWYQVSSPIKLMMDRLVCADGGNPDPTSTEGKDARLAKALELEGWNYPRHLAGRVFSI
VVHGDVEGVENVRRSLSDWLRYMHLEPAGPLAELDRYIGYWKPYAQSHAELDADEAVQ
EEVRNAARTVVEAVTLKRAGKQVSAGRELSQPRQK"
misc_feature 171249..171977
/locus_tag="NGR_b01800"
/note="Multimeric flavodoxin WrbA [General function
prediction only]; Region: WrbA; COG0655"
/db_xref="CDD:31000"
gene complement(172260..173144)
/locus_tag="NGR_b01810"
/db_xref="GeneID:7789719"
CDS complement(172260..173144)
/locus_tag="NGR_b01810"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822400.1"
/db_xref="GI:227818429"
/db_xref="GeneID:7789719"
/translation="MTSMTETLTIFEPHPGVFAYYDGRVEGRRLYSTEPNWLDDGAYE
LGIASYAIVDAGEALVYDTHVSLAHGQAVRRHVEGLGAKSIRVVLSHWHDDHIAGNAV
FADCEIIALKLTADALEAHREQLAAGTPPISPLVMPNRLFERRLDLQVGNRRVELHHF
DIHSADGNVLWLPDDRILLAGDTLEDTITYVSEAQNTATHIRELARLATWPIDRILPN
HGAPDRIAAGGYDTRFIDANRRYLERLMDAVQQGGQTAAVAPLTDFIAPELARGAVSY
FEPYEAVHRKNIAALSAI"
misc_feature complement(172407..173024)
/locus_tag="NGR_b01810"
/note="Zn-dependent hydrolases, including glyoxylases
[General function prediction only]; Region: GloB; COG0491"
/db_xref="CDD:30837"
misc_feature complement(172488..173000)
/locus_tag="NGR_b01810"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; smart00849"
/db_xref="CDD:197917"
gene complement(173282..173917)
/locus_tag="NGR_b01820"
/db_xref="GeneID:7789720"
CDS complement(173282..173917)
/locus_tag="NGR_b01820"
/codon_start=1
/transl_table=11
/product="NADPH-dependent FMN reductase family protein"
/protein_id="YP_002822401.1"
/db_xref="GI:227818430"
/db_xref="GeneID:7789720"
/translation="MFGEPTEKNSVAPLIVGLGGTTRDGSSTELALRYALNEAEQAGA
RTMLFNGQALMMPMYAPEVPHRTAEAQAFIAALRAADGIIIASPAYHGSISGLVKNAL
DYTEDMRNDAAAYLDGRAVGCITCAYGPQAAGTTLVALRSIVHALRGWPTPLGVGINS
ATCRFSPEGEPSETAIADQLKIMATQVAKGAFAMRAGLAAARKPDRLIAVA"
misc_feature complement(173450..173875)
/locus_tag="NGR_b01820"
/note="NADPH-dependent FMN reductase; Region: FMN_red;
pfam03358"
/db_xref="CDD:202604"
gene complement(174027..174938)
/locus_tag="NGR_b01830"
/db_xref="GeneID:7789721"
CDS complement(174027..174938)
/locus_tag="NGR_b01830"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002822402.1"
/db_xref="GI:227818431"
/db_xref="GeneID:7789721"
/translation="MIQLRHIKAFLAVADTGSIRTAALRLNVSQPALSKTIQELEEIL
SAPLYTRSAHGSMPTEFGRAFLHRARIIDTEFSRAQEEISQMVGAKGGKVAVGLSAIA
SMLMASQALERFWKKNPNVNVRISDGLLDRLVGGVRQGEFDFAVGGVPPSSLGHDLTI
EPLFENRIVPVVRVGHPLADARSLKDLARANWLYTNDQPAFMALMNQHFVDHGVPPPR
VLLTCESFSAVLDILPSTDLVAALPRSCLTHPLVRARMVGLALDGGGSHTMVGLVTRA
GVPLTPLAASLAKAFRQIGMRYNNLAR"
misc_feature complement(174060..174935)
/locus_tag="NGR_b01830"
/note="putative DNA-binding transcriptional regulator;
Provisional; Region: PRK09791"
/db_xref="CDD:182077"
misc_feature complement(174750..174929)
/locus_tag="NGR_b01830"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(174078..174641)
/locus_tag="NGR_b01830"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature complement(order(174234..174239,174243..174248,
174264..174281,174558..174578,174582..174584,
174594..174596,174603..174608,174612..174614,
174618..174620))
/locus_tag="NGR_b01830"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene complement(175025..175897)
/locus_tag="NGR_b01840"
/db_xref="GeneID:7789722"
CDS complement(175025..175897)
/locus_tag="NGR_b01840"
/note="similar to lipase/esterase; lipQ protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822403.1"
/db_xref="GI:227818432"
/db_xref="GeneID:7789722"
/translation="MNAHTQEQSGRYAVEATALDYVARDGTPLSGTFYRPRAKSELPT
LVAVHGGGWRLAPKGNYQHIGPYLAAQGYAVFAPTYRLAKGELPSYPAAVHDVRAAVQ
FVRAEAENLGLDANRLALLGDSSGAHLAALVALAGDLPLFKDGSPNGGLDRWSAGVKA
CIPVYGIFDLAAQWQHDQAVRFDDHIVERFLGERLVDDRRPYFDASPLSHVSATRKET
AFLVAWGINDDVVDPASQSEAFVLALKQAGIFVRSLPVPSAPHYWISDPLDEAGSFSG
FFAPRLLRFLEAKL"
misc_feature complement(175592..175822)
/locus_tag="NGR_b01840"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature complement(175115..175765)
/locus_tag="NGR_b01840"
/note="alpha/beta hydrolase fold; Region: Abhydrolase_3;
pfam07859"
/db_xref="CDD:203783"
misc_feature complement(175028..175699)
/locus_tag="NGR_b01840"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene 176170..176979
/locus_tag="NGR_b01850"
/db_xref="GeneID:7789723"
CDS 176170..176979
/locus_tag="NGR_b01850"
/note="similar to alpha/beta hydrolase superfamily"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822404.1"
/db_xref="GI:227818433"
/db_xref="GeneID:7789723"
/translation="MKHHFLHTGDVELEWHETGEGAPILYLHGGQGFFPDDAFVAELA
RTRRVIVPSHPGFGKSSLPDWLDCVSDIAHVHLALLDYLGLDEVDVVGCSIGGWIAAE
MGTMSPERFGRIVLAAPVGIKVGPVDRLDVPDIFALSQEQVTGLFYHDAAKFRFDASA
HSDDRLTIIVRNRETLTLLTWEPYMHNPKLRHRLQRVTAPTLILRGGSDGFVSADYAN
AYARLIPNASVETIEAAGHNIAEERPEALAARVEAFLADPQTTKTLWRNAG"
misc_feature 176239..176919
/locus_tag="NGR_b01850"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:205026"
misc_feature <176374..>176523
/locus_tag="NGR_b01850"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene 176976..178172
/locus_tag="NGR_b01860"
/db_xref="GeneID:7789724"
CDS 176976..178172
/locus_tag="NGR_b01860"
/codon_start=1
/transl_table=11
/product="monooxygenase"
/protein_id="YP_002822405.1"
/db_xref="GI:227818434"
/db_xref="GeneID:7789724"
/translation="MRAWFFSENAYPDLPPETEYDSIRVTLPNSLYDPKKGAALYDRY
IDEWLVAEEEGLDIMLNEHHQTPTCVDPAAPLVLAALARLTSKARLLLLGNPISNRRD
PVRVAEEMALADILSHGRLEVGFVRGVPYELAAANSNPVRTNERHWEALDLILKAWTT
RDGPFSHEGQFFHHRNVNIWPRPYQDPHPPVWVSATSPGGAARVGSRGFVQATFLTGF
GGTPRVYESYRQGWREAGRGAVTPVNRLAYAPLLYTSPDPARARAGAEQLLWYLKANK
VPVHYKNPPGYVPVDVNVRFLRGAMPQLAASIKDLNVEKAIEAGIMFAGTPDQVFEQV
KHFYGKVGGFGHMLLMGQAGFLDHEDTVHGIRTFARDVYPRLKEAFPDDAASGADEER
VQAVAG"
misc_feature 177072..178112
/locus_tag="NGR_b01860"
/note="Coenzyme F420-dependent N5,N10-methylene
tetrahydromethanopterin reductase and related
flavin-dependent oxidoreductases [Energy production and
conversion]; Region: COG2141"
/db_xref="CDD:32324"
misc_feature 177099..>177566
/locus_tag="NGR_b01860"
/note="Flavin-utilizing monoxygenases; Region:
Flavin_utilizing_monoxygenases; cl07892"
/db_xref="CDD:213112"
gene 178215..179186
/locus_tag="NGR_b01870"
/db_xref="GeneID:7789725"
CDS 178215..179186
/locus_tag="NGR_b01870"
/note="similar to ABC transporter substrate-binding
protein"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_002822406.1"
/db_xref="GI:227818435"
/db_xref="GeneID:7789725"
/translation="MKHILRSLAAGVVVLAGIGTADAADAWRHGVVEAKGDAGIQFMP
SKFAEKFNLDLETVEFASSTVPVKALLAGEIDSYATTPLTAIAAMAEGASLKFLGCNW
PGMTYDLYAKGDIKTIKDLKGRSVGISGPGGAPDLFAREALRWGGLDPSEVTFANAGG
GGDRFRAVVAGVVDATATSSEFEPEAAERGVNVIARAPEATPNLLRICVVTSDKVIAE
KHDQLVRFLAAQMVGHKYAVENPKETADYAREVAKLPPDDKSPEFIFEEVVKYDAVKP
DLPIMADKLQWNVDMMHRNGRIKESYDIKNFIDEGPRQEALKLAATN"
misc_feature 178332..>178664
/locus_tag="NGR_b01870"
/note="NMT1-like family; Region: NMT1_2; cl15260"
/db_xref="CDD:212369"
misc_feature 178353..179141
/locus_tag="NGR_b01870"
/note="ABC transporter, substrate-binding protein,
aliphatic sulfonates family; Region: SsuA_fam; TIGR01728"
/db_xref="CDD:130789"
gene 179204..179995
/locus_tag="NGR_b01880"
/db_xref="GeneID:7789726"
CDS 179204..179995
/locus_tag="NGR_b01880"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002822407.1"
/db_xref="GI:227818436"
/db_xref="GeneID:7789726"
/translation="MGHVELLNVSKTFPLKVKGVQRHARALDNLSFSVNKGEIVALAG
PSGCGKTTALRIIMGLESASSGSVTVAGRQINGCGFDRGMVFQHAELLPWRSAVENIK
FGLEMKNLAQKEIDERAERFINLVGLGHAKDHRPHQLSGGMKQRVGIARALAIDPEVL
LMDEPFGALDSQTRETLQMELLDIHQRTEKTIIFVTHDLDEAVLLADRVVVMVGGHLR
EIIPVELERPRSDMRRIRSASEFTRKRTMIWEALHEPAKPHELAA"
misc_feature 179204..179968
/locus_tag="NGR_b01880"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
system, ATPase component [Inorganic ion transport and
metabolism]; Region: TauB; COG1116"
/db_xref="CDD:31313"
misc_feature 179213..179878
/locus_tag="NGR_b01880"
/note="NrtD and SsuB are the ATP-binding subunits of the
bacterial ABC-type nitrate and sulfonate transport
systems, respectively. ABC transporters are a large
family of proteins involved in the transport of a wide
variety of different compounds, like sugars; Region:
ABC_NrtD_SsuB_transporters; cd03293"
/db_xref="CDD:73052"
misc_feature 179333..179356
/locus_tag="NGR_b01880"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73052"
misc_feature order(179342..179347,179351..179359,179462..179464,
179690..179695,179792..179794)
/locus_tag="NGR_b01880"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73052"
misc_feature 179453..179464
/locus_tag="NGR_b01880"
/note="Q-loop/lid; other site"
/db_xref="CDD:73052"
misc_feature 179618..179647
/locus_tag="NGR_b01880"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73052"
misc_feature 179678..179695
/locus_tag="NGR_b01880"
/note="Walker B; other site"
/db_xref="CDD:73052"
misc_feature 179702..179713
/locus_tag="NGR_b01880"
/note="D-loop; other site"
/db_xref="CDD:73052"
misc_feature 179780..179800
/locus_tag="NGR_b01880"
/note="H-loop/switch region; other site"
/db_xref="CDD:73052"
gene 180005..180841
/locus_tag="NGR_b01890"
/db_xref="GeneID:7789727"
CDS 180005..180841
/locus_tag="NGR_b01890"
/codon_start=1
/transl_table=11
/product="amino acid ABC transporter permease"
/protein_id="YP_002822408.1"
/db_xref="GI:227818437"
/db_xref="GeneID:7789727"
/translation="MSITETTARAKTGKEQASVAAEKAWSMPDWAITTISLLILVGVW
QAAAPFIDPLFGSYPSQIFSSFLVMMESGTLARAFWQSIQPFFAGYLLAAAIGVPAGL
LLGRYRVAEAALGIYVMAGYATPLIALVPLLMVWFGLGFAVKMVIIFLLAFFPICINT
WVGVKAVPRTLVEVGTAFCAPQSRIMRQIVLPATLPYIMAGLRLAIGKAVIAMIIAEF
LTAISGLGGIIINAANSFRTAEMFVPIICVMILAVVLDRLVAWLERKVAPWQSEIAGD
HA"
misc_feature 180083..180811
/locus_tag="NGR_b01890"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
system, permease component [Inorganic ion transport and
metabolism]; Region: TauC; COG0600"
/db_xref="CDD:30945"
misc_feature 180239..180778
/locus_tag="NGR_b01890"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(180287..180292,180299..180304,180317..180319,
180344..180355,180359..180388,180395..180400,
180404..180406,180452..180457,180461..180463,
180467..180469,180476..180481,180485..180487,
180497..180502,180509..180511,180560..180562,
180602..180607,180614..180616,180635..180646,
180653..180658,180695..180700,180728..180733,
180740..180745,180749..180754,180761..180766,
180773..180778)
/locus_tag="NGR_b01890"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(180362..180406,180635..180652)
/locus_tag="NGR_b01890"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(180404..180406,180437..180439,180653..180655,
180689..180691,180698..180700,180728..180730)
/locus_tag="NGR_b01890"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(180512..180550,180566..180571,180581..180583)
/locus_tag="NGR_b01890"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 180834..181601
/locus_tag="NGR_b01900"
/db_xref="GeneID:7789728"
CDS 180834..181601
/locus_tag="NGR_b01900"
/EC_number="3.5.1.59"
/note="N-carbamoylsarcosineamidohydrolase; CSHASE"
/codon_start=1
/transl_table=11
/product="N-carbamoylsarcosine amidase"
/protein_id="YP_002822409.1"
/db_xref="GI:227818438"
/db_xref="GeneID:7789728"
/translation="MREGSKAENQGARVWDRFLTERDREVVGIAGYGARQGFGTRPAV
LVVDVNYAFCGDRREPVQDSILRWRQSGGEEAWDALPTLSGLIGLARSKGLPLIYTTG
AEREDKWDRGSWLWKNSRSRERPKAVELDGNTIMPQIAPAPQDVVIHKQKPSAFHGTN
LLDYLFLFKCDSLIVMGTATSGCVRATVVDAFSHNLRVTVVEDGCFERCQASHAMSLF
DMNSKYADVLPSGEVRTFMEGLEAGLFDLPAGSRGKA"
misc_feature 180957..181517
/locus_tag="NGR_b01900"
/note="Isochorismatase family; Region: Isochorismatase;
pfam00857"
/db_xref="CDD:201475"
misc_feature 181020..181532
/locus_tag="NGR_b01900"
/note="Cysteine hydrolases; This family contains
amidohydrolases, like CSHase (N-carbamoylsarcosine
amidohydrolase), involved in creatine metabolism and
nicotinamidase, converting nicotinamide to nicotinic acid
and ammonia in the pyridine nucleotide cycle. It...;
Region: cysteine_hydrolases; cl00220"
/db_xref="CDD:185838"
misc_feature order(181020..181022,181281..181283,181380..181382)
/locus_tag="NGR_b01900"
/note="catalytic triad [active]"
/db_xref="CDD:29548"
misc_feature 181365..181370
/locus_tag="NGR_b01900"
/note="conserved cis-peptide bond; other site"
/db_xref="CDD:29548"
gene 181769..182857
/locus_tag="NGR_b01910"
/db_xref="GeneID:7789729"
CDS 181769..182857
/locus_tag="NGR_b01910"
/note="similar to ammonia monooxygenase"
/codon_start=1
/transl_table=11
/product="monooxygenase"
/protein_id="YP_002822410.1"
/db_xref="GI:227818439"
/db_xref="GeneID:7789729"
/translation="MRRYLGRFAPSKFPYRKLLLALAIGFIGGCIFFYFHLPLPWMLG
SLVACLVASLFNMPVAVPGIVRPPMLMLVGVVLGSGFTPAMAGSMIDWLPGLGILMVF
VVLTAGCSYVYFRRVGGFDHWTAFFSGMPGGLVEMTALGDAYGANTRAIALVHSSRIM
LVVLTLPFVLTVVGGQTLAGISRSGASVLEAPISAELWLFGTGLCGAVLGRLLSMPSP
FLMGPMLASAAVHLTGLSAFHAPWEIIAFAQLVLGSALGCSFAGVKKSSILHILRLSV
GSTAFLVAASTSCALLVSHLTGSPILSLLLAYSPGGLTETSLMALSLHVDVAFVATHH
VLRVFFVAVSATFLARLLRRGRLANKDG"
misc_feature 181868..182248
/locus_tag="NGR_b01910"
/note="membrane protein AbrB duplication; Region:
Gneg_AbrB_dup; TIGR03082"
/db_xref="CDD:200241"
misc_feature 181889..182791
/locus_tag="NGR_b01910"
/note="Putative ammonia monooxygenase; Region: AmoA;
pfam05145"
/db_xref="CDD:113899"
misc_feature 182357..182809
/locus_tag="NGR_b01910"
/note="membrane protein AbrB duplication; Region:
Gneg_AbrB_dup; TIGR03082"
/db_xref="CDD:200241"
gene 183209..183463
/locus_tag="NGR_b01920"
/db_xref="GeneID:7789730"
CDS 183209..183463
/locus_tag="NGR_b01920"
/codon_start=1
/transl_table=11
/product="transmembrane protein"
/protein_id="YP_002822411.1"
/db_xref="GI:227818440"
/db_xref="GeneID:7789730"
/translation="MRKLVIAVGMIGTLASCTQTERATAIGAGTGAIIGGVVSDSWGG
AAIGAVAGGVMGNLIGRSRERDGYCIYRDRYGRRYEARCR"
gene complement(183598..184419)
/locus_tag="NGR_b01930"
/db_xref="GeneID:7789731"
CDS complement(183598..184419)
/locus_tag="NGR_b01930"
/codon_start=1
/transl_table=11
/product="lactone hydrolase"
/protein_id="YP_002822412.1"
/db_xref="GI:227818441"
/db_xref="GeneID:7789731"
/translation="MSDNTDSIAVSRDGTRISYRLVRGNGQGRVVLVHSLAMDKTFWQ
PTVSALDGFADALIFDCRGHGASDKPAALYSVELFADDVADLMDHAGWRSAVVAGASM
GGCVALAFAANYPERVEALGLFDTTAWYGENAPKAWAERADKALAEGMAALVGFQKTR
WFSDGFREANPDVVERAIGVFLENELPAYAATCAMLGNADLRAALPRFDFPCRVAVGT
EDYATPPEMARYMADNIPGASLFILEGVRHFTPLEIPSIIAGHLKELVKAGAPGS"
misc_feature complement(183631..184374)
/locus_tag="NGR_b01930"
/note="3-oxoadipate enol-lactonase; Region: protocat_pcaD;
TIGR02427"
/db_xref="CDD:131480"
misc_feature complement(<184036..>184179)
/locus_tag="NGR_b01930"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene complement(184512..185462)
/locus_tag="NGR_b01940"
/db_xref="GeneID:7789732"
CDS complement(184512..185462)
/locus_tag="NGR_b01940"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002822413.1"
/db_xref="GI:227818442"
/db_xref="GeneID:7789732"
/translation="MPMNLANIDLKLLVVFDAMMAEGSVSRAAARLGMSQPALSNALN
RLRLLLNDRLFLRTAEGMRPTPRAIEISGPIQSAMRQIEEALEPTAFEPHDPDWTFSL
AVSDHASVVLLPLLIEHIARVAPRVTLNIQSRPNEELPALLDNGEIDLAVGVIPNLPR
RFKHMAVFEDKYLCMMRQGHPLAGRPITLEEFLAADQLSVKPGISDISRVDRLLAEAG
LKRRVATTVHQFLAAPAIVSRSDLIVLVFEKMVPIFDPSRFYFCSVPVPNMQVAATAV
WGDVHSELPAHKWLRRQLAAAARQLAAESGGDVRPLSAAG"
misc_feature complement(184596..185441)
/locus_tag="NGR_b01940"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(185259..185435)
/locus_tag="NGR_b01940"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(184596..185168)
/locus_tag="NGR_b01940"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulators that involved in the
catabolism of nitroaromatic/naphthalene compounds and that
of related regulators; contains the type 2 periplasmic
binding fold; Region: PBP2_Nitroaromatics_like; cd08417"
/db_xref="CDD:176109"
misc_feature complement(order(184644..184646,184842..184844,
184953..184955,185127..185129,185139..185144,
185148..185150))
/locus_tag="NGR_b01940"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:176109"
misc_feature complement(order(184746..184748,184755..184760,
184767..184772,184779..184793,184875..184877,
185064..185066,185070..185084,185088..185093,
185100..185105,185109..185114,185121..185126,
185133..185138,185145..185147))
/locus_tag="NGR_b01940"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176109"
gene 185664..187739
/locus_tag="NGR_b01950"
/db_xref="GeneID:7789733"
CDS 185664..187739
/locus_tag="NGR_b01950"
/codon_start=1
/transl_table=11
/product="transmembrane protein"
/protein_id="YP_002822414.1"
/db_xref="GI:227818443"
/db_xref="GeneID:7789733"
/translation="MHLFEQAMMAFTVIFDPIRFMIIMLGCVLGLFIGVIPGIGGLAG
MALLLPFTYTMDPYTALAFLIGMWAVTPTADTIPSILIGVPGAAGSAATVMDGYPMAR
RGEAGRALGASYTASLIGGIFGAILLGLAIPILRPFMMAFGTPELLALCILGLTLVAA
VSQGNMMKGLVAACFGVVIASVGDEAQTGELRWTFDSLYLWEGVPLEALVLGLFAVPE
LLELGAARQAVAMHKSESILRDQFRGVKDAIQNIRLVFQSSWLGAILGSVPGLGGPAI
DWIAYGSAAKSVKDGTKTFGTGDVRGVIACEAANNSREGGALIPTLAFGIPASATMAI
LLGAFMMHGIQPGPKLLTEQLDITYTIVWSLMIANIVGVLICFAFVSQLAKLALVPAA
ILVPTVLAIVFIGAYSATRDIGDIIVLLIFSVIGWAMKRFGWARAPVLLGLVLGDLVE
QYLFISTSRYGSDWLYRPGVIFILMIPVVFFIYSALRFVMKRRGAVPVAVGAAVSEPA
APREPTGPVSAVDRIMLPGMWVLAAILFATALVTSTEWAFAAKLMPQTVSAVGLIVVA
CAGVGVFMRQRAGEVIIKPRRAHEADPLEAMSDGALYKRMGGMAAWVLSVYIGTLLIG
LLPTLLLFMIAYMRFEGKQPWVRTLVISIVIWVAMVVLFDRLLVMPWPQSYLGDALPQ
VRTLVSDLI"
misc_feature 185721..186977
/locus_tag="NGR_b01950"
/note="Tripartite tricarboxylate transporter TctA family;
Region: TctA; pfam01970"
/db_xref="CDD:145250"
gene 188103..189083
/locus_tag="NGR_b01960"
/db_xref="GeneID:7789734"
CDS 188103..189083
/locus_tag="NGR_b01960"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_002822415.1"
/db_xref="GI:227818444"
/db_xref="GeneID:7789734"
/translation="MLDRSSQSPTHIPTDALSEVLQDFRLSGVNYGRCELRHPWSIAF
PQQQLLRFHFVSEGPCWVHTEAQGWQELRDGDLVLLPQGVEHRLASKPDVVGDSLKSC
HVTKLGGNVCEVVQQGTGATSTLFCGSMALGANALNPLIALMPPIIRGCDVAGNDPIV
GPLLAAMTAEASQPQIGSATVLSRMADVLVARLIRCWVNCSGASTSGWLAAIRDPHIG
RALAAMHRDPGHDWTLETLAGVAGQSRSIFAERFSAILGEGAARYLARLRMQLARELL
GQNMSVAEVASQLGYESEASFARAFKRITSVSPGVVRRTISGRTDMEFGL"
misc_feature 188145..188696
/locus_tag="NGR_b01960"
/note="Cupin; Region: Cupin_6; pfam12852"
/db_xref="CDD:205108"
misc_feature 188793..189041
/locus_tag="NGR_b01960"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature 188919..189029
/locus_tag="NGR_b01960"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 189143..190351
/locus_tag="NGR_b01970"
/db_xref="GeneID:7789735"
CDS 189143..190351
/locus_tag="NGR_b01970"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822416.1"
/db_xref="GI:227818445"
/db_xref="GeneID:7789735"
/translation="MTDTTSQLDGPAIGLDSADPSAWSPTTWLAVISMAATSFALVSA
EFLPAGLLTPMARDLGISEGTAGQVVTATASVGAVTALLSNVLIGKLNRKTVLVGLSA
LAIGSNLLAAFATDFWLLLLGRAGLGVALSGFWALSVAVVARLVGTNATGRGMAIVTL
GVSVATIAAPSMGALISDWLGWRAATGMTAGLAAIAMLLQTLSLPSLPASTSNSLSDV
FRLTKRRTVQLGMLAILLLMTGHFSGSVYVRPFLEQVTLLGTGPIALALLGFGIAAVI
GNVAGGRLADTNIHMALAVTGVLMAFAALALVLWGAHSGIAFALVTLWGLAFGMAPVV
LPTNLSRGAGNALEAAGSLMVVSFQVAISMGAVFGGYIVDHHGASGPLIITAVLAAST
IVLALLQPRS"
misc_feature 189191..190348
/locus_tag="NGR_b01970"
/note="Arabinose efflux permease [Carbohydrate transport
and metabolism]; Region: AraJ; COG2814"
/db_xref="CDD:32643"
misc_feature 189233..190336
/locus_tag="NGR_b01970"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(189275..189277,189284..189292,189296..189301,
189350..189352,189359..189364,189371..189373,
189383..189388,189392..189397,189533..189538,
189545..189550,189557..189562,189569..189571,
189605..189610,189617..189622,189638..189640,
189854..189856,189863..189868,189875..189880,
189887..189889,189929..189931,189941..189943,
189953..189955,189962..189964,189974..189976,
190115..190117,190124..190129,190136..190138,
190148..190153,190160..190162,190190..190195,
190202..190207,190214..190219,190226..190228)
/locus_tag="NGR_b01970"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(190779..192548)
/locus_tag="NGR_b01980"
/db_xref="GeneID:7789736"
CDS complement(190779..192548)
/locus_tag="NGR_b01980"
/codon_start=1
/transl_table=11
/product="thiamine pyrophosphate"
/protein_id="YP_002822417.1"
/db_xref="GI:227818446"
/db_xref="GeneID:7789736"
/translation="MDHQGTKRFVPVETGAPRYGSDLIAAAIREQGFPYICLNPGASY
RHLHDSLVNYLGNEKPKILLCMHEEHAIGIAQGWAKITDRPLAAAVHSNVGLMHATMG
IFDAWCDRVPLVVIGATGPLDATKRRPWIEWIHCTIDQGGLVRDFTKWDDEPASPEAA
VESIRRAAMLATARPSGPTYVNLDVTVQEMELEEVPALHDISRFRAPADPEPPRRELE
AAIEILAKAKRPVILSGRTSRSEDGWAERVKLAELIGAKVLTHVKLATSFPTTHPLFI
GETGWKLSKNLLKHLTEADAVLSLDWLDLAGTINQVFPAGGPSAPIISVSNDFNIHRG
WNMDYQGLPAVDVNIPTVPETAVSRLLEALETRLSAPRTYERRRLDAEPSRTSGPISL
MDLARVFNRVTRDLDVSLTSRPLGWPTNANELEHPHDYLGHNGGGGVGSGPSIGIGAA
LALRDMKSPRVPIAIVGDGDFTMGNTALWSAASQGIPLLYVISNNNSYFNDEHHQAQV
AVQRGRPPENAWVGQRLQDPVPDLLMLAKAQGIDGEGPITDITELSGALERGIEKVRA
GQPWVIDVRVPPEYCRDPMVELA"
misc_feature complement(190815..192491)
/locus_tag="NGR_b01980"
/note="acetolactate synthase catalytic subunit; Validated;
Region: PRK08327"
/db_xref="CDD:181391"
misc_feature complement(192000..192485)
/locus_tag="NGR_b01980"
/note="Pyrimidine (PYR) binding domain of POX and related
proteins; Region: TPP_PYR_POX_like; cd07035"
/db_xref="CDD:132918"
misc_feature complement(order(192222..192227,192234..192236,
192246..192248,192267..192269,192303..192311,
192315..192320,192327..192332,192339..192341,
192348..192368,192402..192404,192414..192416,
192426..192431,192444..192446))
/locus_tag="NGR_b01980"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132918"
misc_feature complement(order(192111..192113,192120..192122,
192237..192239,192246..192251,192255..192260,
192267..192269,192342..192344,192348..192359,
192363..192365,192402..192404,192414..192416,
192423..192431))
/locus_tag="NGR_b01980"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132918"
misc_feature complement(order(192255..192257,192267..192269,
192345..192347,192429..192431))
/locus_tag="NGR_b01980"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132918"
misc_feature complement(191565..191861)
/locus_tag="NGR_b01980"
/note="Thiamine pyrophosphate enzyme, central domain;
Region: TPP_enzyme_M; pfam00205"
/db_xref="CDD:201080"
misc_feature complement(190821..191381)
/locus_tag="NGR_b01980"
/note="Thiamine pyrophosphate (TPP) enzyme family,
TPP-binding module; found in many key metabolic enzymes
which use TPP (also known as thiamine diphosphate) as a
cofactor. These enzymes include, among others, the E1
components of the pyruvate, the acetoin and...; Region:
TPP_enzymes; cl01629"
/db_xref="CDD:207466"
misc_feature complement(order(191058..191060,191064..191066,
191139..191150,191235..191237))
/locus_tag="NGR_b01980"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:48162"
gene complement(192637..193683)
/locus_tag="NGR_b01990"
/db_xref="GeneID:7789737"
CDS complement(192637..193683)
/locus_tag="NGR_b01990"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822418.1"
/db_xref="GI:227818447"
/db_xref="GeneID:7789737"
/translation="MKLKSIRLLAAAAATACATMSGAATAQADAVSDFYSGKTVTILI
GHPPGGSYDLYAQLIAQHFGKHIPGQPTVIVQGMPGGGGSLAAAHFYAKAPRDGTIVA
LLPESLAQDQVLEPKKSRWDVSKMRFIGRVSDVTSVMMARKDSPVKSIEDSLRAEANV
SCSGRTTSSAQTGAVLKSLIGSKFNMVCGYDSATASALAVFRGEADLTTTVWANWSVN
YAQQLSAGDVVPVVQFSEKRLAALPDTPTAVELTNDPAKKQAIEFFGAGGDIGRALMT
PPETPEDRVAGLSAAFDGLMKDPEFLADAKARSIPIAPITGKEVDAIVERIISTSPEV
VATLKQAINDGFNN"
misc_feature complement(192664..193590)
/locus_tag="NGR_b01990"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3181"
/db_xref="CDD:32994"
misc_feature complement(192781..193518)
/locus_tag="NGR_b01990"
/note="NMT1-like family; Region: NMT1_2; cl15260"
/db_xref="CDD:212369"
gene 193900..194403
/locus_tag="NGR_b02000"
/db_xref="GeneID:7789738"
CDS 193900..194403
/locus_tag="NGR_b02000"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822419.1"
/db_xref="GI:227818448"
/db_xref="GeneID:7789738"
/translation="MATGRQGLWDFALRLYGAPGVGDACLVLQDESGVDVPVLLFAAW
LSKHSVALTEAELVRIDQIVADWRNEVVKPLRAVRRRLKGGPYPAPAETTETLRNGVK
GVELSSEKIELAVLEAEGEALLAVGASAVNATGNLAVVLRHFRGADPDATAAEALATV
GKALAAL"
misc_feature 193921..194232
/locus_tag="NGR_b02000"
/note="Protein of unknown function (DUF2390); Region:
DUF2390; pfam09523"
/db_xref="CDD:204262"
gene complement(194407..194991)
/gene="ubiX"
/locus_tag="NGR_b02010"
/db_xref="GeneID:7789739"
CDS complement(194407..194991)
/gene="ubiX"
/locus_tag="NGR_b02010"
/EC_number="4.1.1.-"
/note="polyprenylp-hydroxybenzoate decarboxylase"
/codon_start=1
/transl_table=11
/product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase"
/protein_id="YP_002822420.1"
/db_xref="GI:227818449"
/db_xref="GeneID:7789739"
/translation="MRRIIIAITGASGIIYGVRALQLLRELEDVETHAVISPAAFRTA
TDEIDMSADEIKGLADVLYNYRDIGAAISSGSFRTAGMLVAPCSVRTLSGIANCYNEE
LIVRAADVCLKERRRVVLLFRETPLHAGHIALMDQATRNGAIVMPPVPAFYSKPKTLD
DMVTQTVGRALDLFDIHLPMVKRWKEGPGSPGQH"
misc_feature complement(194437..194991)
/gene="ubiX"
/locus_tag="NGR_b02010"
/note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase;
Provisional; Region: PRK06029"
/db_xref="CDD:180355"
misc_feature complement(194593..194940)
/gene="ubiX"
/locus_tag="NGR_b02010"
/note="Flavoprotein; Region: Flavoprotein; pfam02441"
/db_xref="CDD:202241"
gene complement(195007..195693)
/locus_tag="NGR_b02020"
/db_xref="GeneID:7789740"
CDS complement(195007..195693)
/locus_tag="NGR_b02020"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_002822421.1"
/db_xref="GI:227818450"
/db_xref="GeneID:7789740"
/translation="MANSLAESLNPLVHEPAPLRNKIMNSLRRAIETGALEPGTRLVE
KDLCEKLNVSRTSLREALRQLQAEGILTDLNNRGLTVVTVTRADAENIYRIRGVLEPL
IVEQFIENAPDNEIKALKTQSDVLKKAYLSGNAEEIVATKRDFYDRICTGARNPIAFD
LLKKLTLLTSPLRRSSVVRKERRSQSIAEIDAIVAAIVNRDKAAAKAAAEKHVANSAV
SAFSNAFDAS"
misc_feature complement(<195214..195651)
/locus_tag="NGR_b02020"
/note="Transcriptional regulators [Transcription]; Region:
GntR; COG1802"
/db_xref="CDD:31987"
misc_feature complement(195445..195642)
/locus_tag="NGR_b02020"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature complement(order(195454..195456,195460..195468,
195472..195477,195505..195507,195514..195519,
195523..195537,195559..195564,195565..195567,
195634..195636,195640..195642))
/locus_tag="NGR_b02020"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(<195226..195420)
/locus_tag="NGR_b02020"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:203742"
gene complement(195805..198093)
/gene="coxL1"
/locus_tag="NGR_b02030"
/db_xref="GeneID:7789741"
CDS complement(195805..198093)
/gene="coxL1"
/locus_tag="NGR_b02030"
/EC_number="1.2.99.2"
/note="COdehydrogenase subunit L; CO-DH L"
/codon_start=1
/transl_table=11
/product="carbon monoxide dehydrogenase"
/protein_id="YP_002822422.1"
/db_xref="GI:227818451"
/db_xref="GeneID:7789741"
/translation="MRFEDDALITGRGRYVNDLTGKGEAAAVFVRSQVASGRIALLDT
EAAAAMPEVLAILTGPDLKAAGLAPIEPRGRHPGPDGGAMRVPLFYPLAIDHVRYVGD
PVAIVVAETRSAALAAAEAMVVEIDERPVVVDPLEAVSAGAPRVWDEFPDNRCFTYEK
GDKAGVDAAIASAHTVVRQRLRISRVVAAPIETRGAIASYDPAADQYRLELGTQAPHR
VSGDVAPVLGVAPDKVHVVVSDCGGSFGMKNAGYPEYPALLFAARKTGRTLRWTADRL
EAFQSDAHARDMWADAALALDADGMFLALDVHVRANLGAYLGPATVHPPVANLGGIAG
VYRTPKIYAKVDGVFTNTQQTAPYRGAGRPEATYIIERMIDLAACEIGLDRAELRRRN
LVPKEAMPYASGFIFTYDSGDFPGVLDKALEMADWAGFEARRSEARARGKLRGIGIAN
PIEIAGGPVARPNPEFARVEISPAGKVRIHVGSMDSGQGHGTAFRQIIADRLGLGAED
MEIVTGDTHAVPQGTGTFGSRTLAAAGGAIWTATETIIDRLKDQAADRLEADRSDILF
ERGEYRIAGTDRAVSFAQVISEETAPVAAENFIGNDGATFPNGCHICELEIDPETGHV
DLLAYSVVDDVGQMVNPLLVKGQITGGVAQGLGQALTENAVYDPNSGQLLSATFMDYA
MPRAHDVPDVDIVDRSVPTRQNPLGVKGVGEAGTVGALSAVMSAVADALRPLGVRHVD
MPATPDRIWRCLKMQPAKEPAP"
misc_feature complement(195835..198093)
/gene="coxL1"
/locus_tag="NGR_b02030"
/note="Aerobic-type carbon monoxide dehydrogenase, large
subunit CoxL/CutL homologs [Energy production and
conversion]; Region: CoxL; COG1529"
/db_xref="CDD:31718"
misc_feature complement(<197776..198066)
/gene="coxL1"
/locus_tag="NGR_b02030"
/note="Aldehyde oxidase and xanthine dehydrogenase, a/b
hammerhead domain; Region: Ald_Xan_dh_C; smart01008"
/db_xref="CDD:198076"
misc_feature complement(196024..197652)
/gene="coxL1"
/locus_tag="NGR_b02030"
/note="Molybdopterin-binding domain of aldehyde
dehydrogenase; Region: Ald_Xan_dh_C2; pfam02738"
/db_xref="CDD:202368"
gene complement(198268..199899)
/locus_tag="NGR_b02040"
/db_xref="GeneID:7789742"
CDS complement(198268..199899)
/locus_tag="NGR_b02040"
/codon_start=1
/transl_table=11
/product="carboxylase/decarboxylase family protein"
/protein_id="YP_002822423.1"
/db_xref="GI:227818452"
/db_xref="GeneID:7789742"
/translation="MTPFARKAPLDLQEHLQRLEELGLLTKIQVPIDKDSELHPLARW
QFQGGLPDEQRRGFLFTDVKGAKGETYDIPVAVGVLAASPAIYAAGLGVSEEEIGDVW
VRAMEQPIDPVTVTEAPCQEVVVTGDALKQEGKGLGSLPVPISTPGFDSAPYFTATLC
VTRDPENGIRNMGTYRAALKAEDRLGVRMASRLSGAGGYQHWLKYQKMGKPMPCAIVI
GCAPAVLFTGPQKLPIDQDELGVAGGLIGEPIRIVKCKTIDLEVPADAEIVIEGLIDP
VLLEPEGPFGESHGHVALEDFNMSMQVTAITRKRKPVLVSIVSQVTPSESSVLKRVAY
EPLFLNHLKKVLNVKGLKRVVMHEPLTNIRKVIFLEFDRSAPQSEVWRGLQGAATLQA
QCGKIIIAVSDDIDSRNADAVFWSLAYRANMIDDVHVTPYRSGGHGPKSGSKSAEGTL
LIDATLKAPMPPLALPAEPYMVRARQIWEDLQLPRLTPQPPWHGYSLGDWTDRWTEFA
DDAVNGDWRRTGENTLARRKGGMKPETPTRDIEKD"
misc_feature complement(198607..199854)
/locus_tag="NGR_b02040"
/note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase;
Region: UbiD; pfam01977"
/db_xref="CDD:202073"
gene 200131..202587
/gene="coxL2"
/locus_tag="NGR_b02050"
/db_xref="GeneID:7789743"
CDS 200131..202587
/gene="coxL2"
/locus_tag="NGR_b02050"
/EC_number="1.2.99.2"
/codon_start=1
/transl_table=11
/product="carbon-monoxide dehydrogenase large subunit"
/protein_id="YP_002822424.1"
/db_xref="GI:227818453"
/db_xref="GeneID:7789743"
/translation="MFSKRRGVMTSPLKTAATEVIMHPLKQSKSPSAELSPEMKLVQE
ALFKHVGKPIPRKEDGRLITGKGRFSDDFSLPGQTYAAIVRSPYPHARILGIDKAEAL
ASPGVLLVLTGEDVLADGLKDIPHNPVPSTNFDMKLRAKDGSHAFTGPHHLLPADKAR
HVGEAVAIVVAETAAQAADGAEKVLVDWEELPYVTDTAKAAEPGAPTIWDEVPDNVFI
DTTFGDREGTDAAFARADHVVKAEFHIHRVTAVTMEPRASLGHYDPETKRYTLYAGSG
GAVRQKNELSKVLGIEPKDLRVLSFDVGGNFGARNRVYVEFGLVLWASRKLGRPVKYT
ATRSEAFLTDYQGRDLVTKVELALRKDGRFLAMRADNLSNVGGRAVSLSPLSKGSGLI
TGSYDIPYATLRARAVFSNTMCTQAYRSSGRPEVTYAIERMVELAADQLGFDKLELRR
MNLIPPSAMPYTNAVGSVYDSGEYEKNMDRALEISEWATFDARKAEAAKRGKLLGRGF
ANYVESSIGTPKERAEIEIKDDGNIEVVIGTQPSGQGHETSFAQVVADMIQVPVEKVW
IVLGDTDIVSVGGGSHSGRSMRHAGTVMAMASADLLAEGRKRAAELLGSAADEIDFEG
GVFKLRNTNRTIDIFELGRRTRQTHGALRVVKDNEMHTPVYPNGAAVCEVEVDRETGH
VEIVRYATIDDVGRCINPLIVHGQTHGGIAQGVGQAMWELCAIDPGSGQPLAGSLMDY
GMPRSDTMPSFKCEIAEVISPTNPLGIKAGGEGGTTPALATVVNAVVDALQEFGVKDI
QMPVTPANVWRAMNNGRKAS"
misc_feature 200263..202566
/gene="coxL2"
/locus_tag="NGR_b02050"
/note="Aerobic-type carbon monoxide dehydrogenase, large
subunit CoxL/CutL homologs [Energy production and
conversion]; Region: CoxL; COG1529"
/db_xref="CDD:31718"
misc_feature 200320..200706
/gene="coxL2"
/locus_tag="NGR_b02050"
/note="Aldehyde oxidase and xanthine dehydrogenase, a/b
hammerhead domain; Region: Ald_Xan_dh_C; smart01008"
/db_xref="CDD:198076"
misc_feature 200794..202377
/gene="coxL2"
/locus_tag="NGR_b02050"
/note="Molybdopterin-binding domain of aldehyde
dehydrogenase; Region: Ald_Xan_dh_C2; pfam02738"
/db_xref="CDD:202368"
gene 202598..203530
/locus_tag="NGR_b02060"
/db_xref="GeneID:7789744"
CDS 202598..203530
/locus_tag="NGR_b02060"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_002822425.1"
/db_xref="GI:227818454"
/db_xref="GeneID:7789744"
/translation="MSDLKTVRVIAFPGAPNLPTFAAIEQGFFAEEGIEVELALTPSS
VAQAEKTAAGEFDIVFTAYDNVVAYGEGQGATAAGVNPDYVVLMGATQLELAIVTAPD
VRTYEDLKGRSIALDALTTGFAFVLFEMMAKNGLKRDDVSFAAVGATPQRWQSVKAGE
HAATLTIEPFTSIARRADFNVLDVSSNHFDSYQGGVVASRRSYAAENPETVEAFLRGY
FKGLEWTLDAKSRDAAAELLKSRMPDIQPAAVPSIMASLLSPRSGLTPGSKILPDGMR
TVLDLRSRYGKGSKLTDISKYLDLSFFEAVTGAK"
misc_feature 202604..203311
/locus_tag="NGR_b02060"
/note="NMT1-like family; Region: NMT1_2; cl15260"
/db_xref="CDD:212369"
misc_feature 202652..203509
/locus_tag="NGR_b02060"
/note="ABC transporter, substrate-binding protein,
aliphatic sulfonates family; Region: SsuA_fam; TIGR01728"
/db_xref="CDD:130789"
gene 203552..204214
/locus_tag="NGR_b02070"
/db_xref="GeneID:7789745"
CDS 203552..204214
/locus_tag="NGR_b02070"
/codon_start=1
/transl_table=11
/product="carbon monoxide dehydrogenase subunit G protein"
/protein_id="YP_002822426.1"
/db_xref="GI:227818455"
/db_xref="GeneID:7789745"
/translation="MDMKGEYRIAAPREHVWALINDSAVLKDCIPGCDSLEGTPETGY
AARVTTKIGPVKATFAGEVMLSNVQAPESLTISGEGKGGVAGFAKGGADVQLFVDGSE
TVLTYIAKAQVGGKLAQLGARLIDSTAKKLADEFFEKLATRAASEAADAGVTERAAAT
IVPVKQAKSAETARAASATVEAAAPATAQAVSTAKPPRRFPFVAFGLVAVTVVIIAAL
AV"
misc_feature 203552..203986
/locus_tag="NGR_b02070"
/note="Carbon monoxide dehydrogenase subunit G (CoxG);
Region: CoxG; cd05018"
/db_xref="CDD:176853"
misc_feature order(203558..203560,203564..203566,203570..203572,
203597..203605,203609..203614,203627..203629,
203639..203641,203657..203659,203675..203677,
203681..203683,203687..203689,203693..203695,
203699..203701,203714..203716,203726..203728,
203738..203746,203753..203755,203771..203773,
203777..203779,203786..203788,203819..203827,
203831..203833,203837..203839,203864..203866,
203870..203872,203876..203878,203882..203884,
203924..203938,203942..203950,203954..203962,
203969..203971)
/locus_tag="NGR_b02070"
/note="putative hydrophobic ligand binding site [chemical
binding]; other site"
/db_xref="CDD:176853"
gene 204236..204727
/gene="coxS"
/locus_tag="NGR_b02080"
/db_xref="GeneID:7789746"
CDS 204236..204727
/gene="coxS"
/locus_tag="NGR_b02080"
/codon_start=1
/transl_table=11
/product="carbon-monoxide dehydrogenase small subunit"
/protein_id="YP_002822427.1"
/db_xref="GI:227818456"
/db_xref="GeneID:7789746"
/translation="MSRITITINGKAETREVEDRTLLVQFIREHVGLTGTHVGCDTTQ
CGACTIHLDGEAVKSCTVLAAAADGCEVTTIEGLADGPKLHPVQQAFHEHHGLQCGYC
TPGMIMASVDMIRRHDGVLDEQTVRHELEGNICRCTGYHNIVKAVLDAAEKHRAAHAV
AAE"
misc_feature 204236..204682
/gene="coxS"
/locus_tag="NGR_b02080"
/note="Aerobic-type carbon monoxide dehydrogenase, small
subunit CoxS/CutS homologs [Energy production and
conversion]; Region: CoxS; COG2080"
/db_xref="CDD:32263"
misc_feature 204455..204682
/gene="coxS"
/locus_tag="NGR_b02080"
/note="[2Fe-2S] binding domain; Region: Fer2_2; pfam01799"
/db_xref="CDD:201981"
gene 204738..205553
/locus_tag="NGR_b02090"
/db_xref="GeneID:7789747"
CDS 204738..205553
/locus_tag="NGR_b02090"
/codon_start=1
/transl_table=11
/product="carbon monoxide dehydrogenase medium subunit"
/protein_id="YP_002822428.1"
/db_xref="GI:227818457"
/db_xref="GeneID:7789747"
/translation="MYATTYHKPRTLAEAVSFYEASEEPSYISGGHTLIPTLKNRLAA
PQHLIDLRSIPELSGIAVTPDKVIIGSATKHAVVAASKEVKAAIPALAGLAGSIGDVQ
VRHMGTIGGSTANNDPAADYPSAVLSLDAIIHTDRREIPADEYFQGLYTTALEPGEIL
VRIEFRIPEIAGYAKFRNPASRYSMAAAFVSKHRDGHVRVAITGAGNEGVFRWTEAEE
RLTESLTPAALAGLAIDPSRMMGDMHAPADYRAHLVSVMTRRAVENLGGTHIL"
misc_feature 204738..205544
/locus_tag="NGR_b02090"
/note="Aerobic-type carbon monoxide dehydrogenase, middle
subunit CoxM/CutM homologs [Energy production and
conversion]; Region: CoxM; COG1319"
/db_xref="CDD:31510"
misc_feature 205251..205532
/locus_tag="NGR_b02090"
/note="CO dehydrogenase flavoprotein C-terminal domain;
Region: CO_deh_flav_C; smart01092"
/db_xref="CDD:198160"
gene 205630..207009
/locus_tag="NGR_b02100"
/db_xref="GeneID:7789748"
CDS 205630..207009
/locus_tag="NGR_b02100"
/codon_start=1
/transl_table=11
/product="DAHP synthetase"
/protein_id="YP_002822429.1"
/db_xref="GI:227818458"
/db_xref="GeneID:7789748"
/translation="MAQNWTPSSWRQKLIEQVPDYPDQAALAATEAQLATFPPLVFAG
EARRLKKQLASVAEGNAFLLQGGDCAESFVEHGADNIRDFFRSFLQMAVVLTYGAQLP
VVKVGRIAGQFAKPRSNSHETQDGRTLLTYRGDIINGTDFTEEARTPDPERQLDAYRQ
SAATLNLLRSFAMGGYANLENVHKWMLGFVKESPQSERYRTLADRISEAMNFMRAIGI
TTENNPSLRETDFFTSHEALLLGYEEALTRIDSTSGDWYATSSHMIWIGDRTRQLGHA
HVEYFRGIKNPIGLKCGPSLEPDSLIELIDALNPMNEAGRLTLICRFGSDKIADRLPK
LIRAVEREGRKVVWSCDPMHGNTVTLSGYKTRPFERILSEVESFFQIHRAEGTHPGGI
HVEMTGKDVTECTGGARAVTASDLQDRYHTHCDPRLNADQALELAFLLAERMKSRRDE
KRTGVWKAV"
misc_feature 205639..206952
/locus_tag="NGR_b02100"
/note="Class-II DAHP synthetase family; Region:
DAHP_synth_2; pfam01474"
/db_xref="CDD:144897"
gene 207053..207994
/locus_tag="NGR_b02110"
/db_xref="GeneID:7789749"
CDS 207053..207994
/locus_tag="NGR_b02110"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_002822430.1"
/db_xref="GI:227818459"
/db_xref="GeneID:7789749"
/translation="MQQRGRPMLRKLDEELPVPQPAVLTDDAAEILAFARDALRSGSR
CALVTLVEIRGGAARSLGAHMAVREDGMFCGFVSGGCVEPAVAAEALEAIRAGCDGML
VLGQGSKFFDIVLPCGGAITLAIHVLRRNDPLEAVLAALAARKRAGLRYDAAAQSLEF
INAATEPGWEEGRFFTSYRPATRVVLCGRSIELRTTISLAEAVGYDVVAVEGAAELRP
EQLDADSAVAFLHHDLDREMALLEIALASPAFYIGALGSERTHRRRCDELRRRGFPEA
SIARIKAPIGLFAKARDAGSLALSVLADIAACRAAGR"
misc_feature 207140..207988
/locus_tag="NGR_b02110"
/note="Xanthine and CO dehydrogenases maturation factor,
XdhC/CoxF family [Posttranslational modification, protein
turnover, chaperones]; Region: XdhC; COG1975"
/db_xref="CDD:32158"
misc_feature 207158..>207298
/locus_tag="NGR_b02110"
/note="XdhC and CoxI family; Region: XdhC_CoxI; pfam02625"
/db_xref="CDD:202317"
misc_feature 207602..207967
/locus_tag="NGR_b02110"
/note="XdhC Rossmann domain; Region: XdhC_C; pfam13478"
/db_xref="CDD:205656"
gene complement(208055..208309)
/locus_tag="NGR_b02120"
/db_xref="GeneID:7789750"
CDS complement(208055..208309)
/locus_tag="NGR_b02120"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822431.1"
/db_xref="GI:227818460"
/db_xref="GeneID:7789750"
/translation="MSIDAELRKVDAEYAIEYLQEHPESGLCCDDRHCWITPNANETD
RQALLLDAVEAERLKDNPRLRLVSGIAHAGRSLWVVRRMT"
gene 208451..208864
/gene="fumA"
/locus_tag="NGR_b02130"
/db_xref="GeneID:7789751"
CDS 208451..208864
/gene="fumA"
/locus_tag="NGR_b02130"
/EC_number="4.2.1.2"
/codon_start=1
/transl_table=11
/product="fumarate hydratase"
/protein_id="YP_002822432.1"
/db_xref="GI:227818461"
/db_xref="GeneID:7789751"
/translation="MSFKDRVVYYVGPVGPVGDEPVGPAGPTTATRMDKYTDMMLELG
LLGKVGKAERGPAADASITAHRRAYLMAVGGAAYLVSKAIRSSRVVAFEDLGMKAIFE
FDVKDMPVTVAVAADGENVHASGPSYWRQRLPLNR"
misc_feature <208532..208828
/gene="fumA"
/locus_tag="NGR_b02130"
/note="Fumarase C-terminus; Region: Fumerase_C; cl00795"
/db_xref="CDD:186192"
gene complement(208939..210261)
/locus_tag="NGR_b02140"
/db_xref="GeneID:7789752"
CDS complement(208939..210261)
/locus_tag="NGR_b02140"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822433.1"
/db_xref="GI:227818462"
/db_xref="GeneID:7789752"
/translation="MIKVLTAMQRLLKDQSGNFGLMTALLVPVLFLSGSVALNIANAT
REASKMQDALDAAAIKAVRSYGEGESENAVRTEANRLFFANFQTPSATDGYNSASPES
PAVEFTFSETGQETRASASYAAQYNPVFWGLQPFVISRRSVAARLTDREACILALHPT
ASRAIEVSGSAAVDTSNCTITSNSDDAQSIYLSGTATLSAECLYATGKVYATLAHLEL
ACGQAREGVSRTPDPFKKKAVPTAGNWVNLSGCGQGFVGNGGGNGDCNGTGKTPNKVP
DGYSVTLKPGTYGELEIKGKVTLQPGNYIIDGGVLKFASQSAVSGEGVTFFLLNGAEI
DLHGGSNFHVTAATSGEWAGFVIVSARNNTEPAVINGNSNSSLSGIIYMPASQEIQYS
GNGSSGGECVRIIAQEITMIGNSGFAIDCKSELADNKILNPGAIRLVQ"
misc_feature complement(<209881..210243)
/locus_tag="NGR_b02140"
/note="Flp pilus assembly protein TadG [Intracellular
trafficking and secretion]; Region: TadG; COG4961"
/db_xref="CDD:34568"
misc_feature complement(210070..210213)
/locus_tag="NGR_b02140"
/note="Putative Flp pilus-assembly TadE/G-like; Region:
Tad; pfam13400"
/db_xref="CDD:205578"
gene complement(210554..211537)
/locus_tag="NGR_b02150"
/db_xref="GeneID:7789753"
CDS complement(210554..211537)
/locus_tag="NGR_b02150"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822434.1"
/db_xref="GI:227818463"
/db_xref="GeneID:7789753"
/translation="MCSRQNDRSSLRARMSVHPIDKLERWLPRSRGAKEGAPVEAFEA
SIQTSNPPVAVDGPYGPVRLKWHKLRTHLAEAPFKLSNLALGWQLGASLEVDILATAD
ERFAVLHDPTLGPSTTGRGRVARMPIASMRGLFHRNADGAPDPDAPVLALAELVDPLR
RLPRAPSANLQLDLKLLEGHTLADSAVTDAAAAVAGLADAIVVGSHHLDDARRLAAAI
PGARLGYDPMLAISRQRDLRDPQRLLRHIERRMTGVSLAYLRYDAIVAAENQGFPLVA
CLLDLGIETDAWTVNPGRDIDDSILRTLVGARVRQITTDVPSEIFRLIRSL"
misc_feature complement(<211136..211279)
/locus_tag="NGR_b02150"
/note="Catalytic domain of phosphoinositide-specific
phospholipase C-like phosphodiesterases superfamily;
Region: PI-PLCc_GDPD_SF; cl14615"
/db_xref="CDD:213131"
misc_feature complement(211211..211213)
/locus_tag="NGR_b02150"
/note="catalytic site [active]"
/db_xref="CDD:176498"
gene complement(211476..212540)
/locus_tag="NGR_b02160"
/db_xref="GeneID:7789754"
CDS complement(211476..212540)
/locus_tag="NGR_b02160"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002822435.1"
/db_xref="GI:227818464"
/db_xref="GeneID:7789754"
/translation="MAKIEFRNVVKRFGAVEVIPDMNLVIEDGEFVALLGPSGCGKST
SLFMLAGIYLPSGGELLFDGHVVNEVEARDRNVGIVFQSYALYPHMSVRDNISFPLRF
KKTPRDEALAKVKAAAELVRVAELLDRRPAELSGGQQQRVALARALVKEPQLLLLDEP
LSNLDASLRLSMRTEIKSLHEQLGVTTVLVTHDQIEATTMADRIICMHAGRIEQVGTP
DDLYLRPSSLFVAGFIGSPPINLIAGEAQHGTLTVNGARFPVEGASGLLTVGLRPEHL
RFGDTGFAGRIAQIEPMGREILYVVETGLGAVRVLEQGSSAAHSTGEEVRIGFLPEDS
LVFETERQKLIAGAHVRAPD"
misc_feature complement(211521..212540)
/locus_tag="NGR_b02160"
/note="ABC-type sugar transport systems, ATPase components
[Carbohydrate transport and metabolism]; Region: MalK;
COG3839"
/db_xref="CDD:33631"
misc_feature complement(211893..212531)
/locus_tag="NGR_b02160"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(212412..212435)
/locus_tag="NGR_b02160"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(211965..211967,212064..212069,
212295..212297,212409..212417,212421..212426))
/locus_tag="NGR_b02160"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(212295..212306)
/locus_tag="NGR_b02160"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(212112..212141)
/locus_tag="NGR_b02160"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(212064..212081)
/locus_tag="NGR_b02160"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(212046..212057)
/locus_tag="NGR_b02160"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(211959..211979)
/locus_tag="NGR_b02160"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
misc_feature complement(211530..211736)
/locus_tag="NGR_b02160"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:203932"
gene complement(212546..213646)
/locus_tag="NGR_b02170"
/db_xref="GeneID:7789755"
CDS complement(212546..213646)
/locus_tag="NGR_b02170"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822436.1"
/db_xref="GI:227818465"
/db_xref="GeneID:7789755"
/translation="MAEQVIPMGSTAASRRGADWDALAARARAVRHAKAVVLYAFLIA
VSLPIILPYLWLVTIAFSARTGVAETAVLWRSMAVVVPAIVAFWLTAALAQSRRQVWI
GIAAVAAIAAFAFALLVGPDLHVGNFIFLWEPDFASVVRSRIGEVKGAVQFPNVWHAF
GNSILIAGAQTAIVVTVASLAAYYLSRFQFPGRSSMLRSLLVLHAFPVLTLIVPMFLM
LYWIGLLDTLSGVILVLVAFELPFAIFIMKGFFDAVPWDIEMSALTDGASRRQAFVSV
VLPQVRNGILAIAVFTFIRGWEEYIFVFTFLIRNSNWTMSLYMYWVRDDVMGVDYGVV
SAVGVFYLVPSLILYMAAQRYLMQMSIGGVKG"
misc_feature complement(212552..>213193)
/locus_tag="NGR_b02170"
/note="ABC-type sugar transport system, permease component
[Carbohydrate transport and metabolism]; Region: UgpE;
COG0395"
/db_xref="CDD:30744"
misc_feature complement(212609..213169)
/locus_tag="NGR_b02170"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(212609..212614,212621..212626,
212633..212638,212642..212647,212654..212659,
212687..212692,212729..212731,212735..212737,
212744..212755,212774..212776,212783..212788,
212828..212830,212879..212881,212888..212893,
212903..212905,212909..212914,212921..212923,
212927..212929,212933..212938,212999..213001,
213005..213010,213017..213046,213050..213061,
213089..213091,213104..213109,213116..213121))
/locus_tag="NGR_b02170"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(212738..212755,212999..213043))
/locus_tag="NGR_b02170"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(212657..212659,212687..212689,
212696..212698,212735..212737,212951..212953,
212999..213001))
/locus_tag="NGR_b02170"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(212807..212809,212819..212824,
212840..212878))
/locus_tag="NGR_b02170"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(213648..214601)
/locus_tag="NGR_b02180"
/db_xref="GeneID:7789756"
CDS complement(213648..214601)
/locus_tag="NGR_b02180"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822437.1"
/db_xref="GI:227818466"
/db_xref="GeneID:7789756"
/translation="MTTIADELTIERRGHQGSAARRRTNFVIFLGPAIILTVLFFVVP
VIIDITVSFTDLSRSLRISEFTTEQYEKVFRTDRRLSQVIGLTFIYVFGTLAIFNVTF
GLILAITTTAIRNVSGSFFRGVWLLPRMSPSVLYILLWLWAVSPTEAGLVNQVLMQAF
GLDAPLDLLTSAPIALIIISNGFIGASMGMIIFTAAIRGIPEHLFHAAAVDGAGTFAT
IRFITLPALRWPISFVTIYQTLSLLVSFEYILLLTKGGPFYDTTVYALYVYRRAFESG
QYGYGAALALFLIVIGVIVALIGWRFFDMERLLQRPRIEVH"
misc_feature complement(213792..214352)
/locus_tag="NGR_b02180"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(213807..213812,213849..213854,
213861..213872,213891..213893,213900..213905,
213945..213947,213996..213998,214005..214010,
214020..214022,214026..214031,214038..214040,
214044..214046,214050..214055,214179..214181,
214185..214190,214197..214226,214230..214241,
214269..214271,214284..214289,214296..214301))
/locus_tag="NGR_b02180"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(213855..213872,214179..214223))
/locus_tag="NGR_b02180"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(213807..213809,213816..213818,
213852..213854,214074..214076,214179..214181))
/locus_tag="NGR_b02180"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(213924..213926,213936..213941,
213957..213995))
/locus_tag="NGR_b02180"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(214678..216480)
/locus_tag="NGR_b02190"
/db_xref="GeneID:7789757"
CDS complement(214678..216480)
/locus_tag="NGR_b02190"
/codon_start=1
/transl_table=11
/product="sugar ABC transporter substrate-binding protein"
/protein_id="YP_002822438.1"
/db_xref="GI:227818467"
/db_xref="GeneID:7789757"
/translation="MIAGMLERSIKACERAAIIWARNGASASEVTSPTSRLRLARSPR
ARSLTWYPSAAAASRTRASVAGAMLAPGVKARETADRDTPASSATAWALTKRPWLLSL
LSDTRSTPLDFPHSAFIIVLHSIATINDDTMKTYRCWEKTKMTHWKIGTAALLGAALS
VGSAALLAATPLFAQETVKLELWSRQDPSGPLRPGNVVKAAERLNKELEAEGSPKRVE
VAVRESPAKGFDDDALQLLKVFGIGEGPDIFIAAHEWICAFQEDGFVLKLDDYIAKYP
QHFGTIFPSLWSSAKCPDGTYAIPQDAEARMFFYNKKLLREAGYDAAFVDAMPERALS
GDLAMDEVLEIAKKVVDKTKAQYGVLHRPNKGPDYIMVFQAYGSDFADPETGKLLLER
DKLAAAFGWFERGVKEKVIPANNTAMEFDALRKEFYTGNAAFWMYGIWDLGSVAFPTY
GLPQDEKAFFADWGWITGPAPQKGGKPVSLTHPIVYAIAADTKEPELAVRLLGHASAA
DLNTDHAVTTTHLGIKPEQLEDPRYAKAWPLARATELLKITKFLPNNSQFGDLNGIIF
AGIQGIESGRLSAQQAADFVIEEASSTLEDVIVK"
misc_feature complement(214696..215961)
/locus_tag="NGR_b02190"
/note="ABC-type sugar transport system, periplasmic
component [Carbohydrate transport and metabolism]; Region:
UgpB; COG1653"
/db_xref="CDD:31839"
misc_feature complement(214975..>215520)
/locus_tag="NGR_b02190"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_1; pfam01547"
/db_xref="CDD:201851"
gene 216107..217186
/locus_tag="NGR_b02200"
/db_xref="GeneID:7789758"
CDS 216107..217186
/locus_tag="NGR_b02200"
/codon_start=1
/transl_table=11
/product="LacI family transcriptional regulator"
/protein_id="YP_002822439.1"
/db_xref="GI:227818468"
/db_xref="GeneID:7789758"
/translation="MLCNTIMNALWGKSSGVERVSDSRDNNQGRFVSAQAVAELAGVS
RSAVSRAFTPGASIAPATLARVREAAAALGYQVNDLARGLLANRSRLVGLVTSDADAP
FRAQMIAALSHALIERSNIPAIISIGPTADDIANASRQLLRYRAEATVFLSGSPPASL
VDLTRRNGQPLILINRAETGLDSVHCDDRDGAQQAFEALCMAGATRFAVVNSASPSPS
LSAREHAFAEFAAASGFEARIVRAGRSDYGGGQEAARQLLSNGPAPDAVFCVNDLMAF
GTLDHLRDAGLRVPHDVSVIGFDDVPIAAWSSYRLTTLRQDPWRIARDVVSILDRRLA
DPDSPPISVYVPVELVVRETVMARR"
misc_feature 216215..217183
/locus_tag="NGR_b02200"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:31797"
misc_feature 216215..216358
/locus_tag="NGR_b02200"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature order(216233..216247,216251..216256,216263..216265,
216278..216283,216290..216292,216329..216331,
216338..216340,216347..216352,216356..216358)
/locus_tag="NGR_b02200"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature 216329..216358
/locus_tag="NGR_b02200"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature 216377..217168
/locus_tag="NGR_b02200"
/note="Ligand-binding domain of uncharacterized
DNA-binding regulatory proteins that are members of the
LacI-GalR family of bacterial transcription repressors;
Region: PBP1_LacI_like_2; cd06278"
/db_xref="CDD:107273"
misc_feature order(216377..216379,216416..216424,216431..216436,
216440..216445,216464..216478,216482..216484,
216515..216517,216524..216526,216533..216541,
216848..216850,216932..216934,216944..216946,
216953..216958)
/locus_tag="NGR_b02200"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:107273"
misc_feature order(216413..216418,216425..216427,216560..216562,
216629..216631,216662..216664,216770..216772,
216839..216841,217001..217003,217052..217054)
/locus_tag="NGR_b02200"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107273"
gene 217219..218028
/locus_tag="NGR_b02210"
/db_xref="GeneID:7789759"
CDS 217219..218028
/locus_tag="NGR_b02210"
/codon_start=1
/transl_table=11
/product="glycerophosphoryl diester phosphodiesterase"
/protein_id="YP_002822440.1"
/db_xref="GI:227818469"
/db_xref="GeneID:7789759"
/translation="MAFSFFAHEQGRVHVCGHRGYSLHYPENTLPAFEAAKAAGATTV
EIDVVLTADGEPIILHDLTVDRTTDGRGFAADLCLEQIRSLDAGGRFHPAFAGTKIPT
VAEALDWVKADDMGVVLEIKEAERPDIAVDRVAALLRSTGTVDRVIVISFDHVVLKRA
VERHPDLRTEAITHARHADLVGVLKACRASSVSIELDMFRPDDARALHEAGFSNRVHV
PRPDVLAEFWRSGRDPLPDLVQWIADGLIDTISGDDVPFIAMLVGRAGRAG"
misc_feature 217267..217917
/locus_tag="NGR_b02210"
/note="Catalytic domain of phosphoinositide-specific
phospholipase C-like phosphodiesterases superfamily;
Region: PI-PLCc_GDPD_SF; cl14615"
/db_xref="CDD:213131"
misc_feature order(217270..217272,217351..217353,217357..217359,
217576..217578,217672..217674,217867..217869)
/locus_tag="NGR_b02210"
/note="active site"
/db_xref="CDD:176498"
misc_feature order(217270..217272,217396..217398)
/locus_tag="NGR_b02210"
/note="catalytic site [active]"
/db_xref="CDD:176498"
gene 218221..219738
/locus_tag="NGR_b02220"
/db_xref="GeneID:7789760"
CDS 218221..219738
/locus_tag="NGR_b02220"
/codon_start=1
/transl_table=11
/product="sulfatase"
/protein_id="YP_002822441.1"
/db_xref="GI:227818470"
/db_xref="GeneID:7789760"
/translation="MKAVFVLFDSLNRHVLAPYGGRRVPTPNFTRLAERAATFDRHYV
GSLPCMPARRDLQTGRLDFLHRSWGPLEPFDNSFPELLHRAGFYSHLVTDHFHYFEDG
GATYHTRYDSYDFIRGQEGDPWKAMVQPPWERLRQMYHERQFSQSARDKFRRNIVNRE
FIKDESAFPSVRCFSAGLEFLERNRTADNWLLQIETFDPHEPFTAPERFREAFRTGWN
GPVRDWPRYGRVDELPEECEELRANYYAVMALCDFLVGQLLDYFDRHDLWRDTALVVT
TDHGFLLGEHDFWAKNRMNMYEEIVHIPLFLRDPRRPGSAGTRRSALTQTIDLAPTFL
DLFDVPAAAEIEGHSLLPLLDADRSLRQGALFGYFGGAINVTDGRYTYHRFPPDLRSQ
ELYQYTLMPTHIWEPFTPEELAGASLAQPMSFTKGAPVLKIPVIERSPMFDNYGPGAL
LESETRLYDLADDPGQNTPLYSPEIEEAMTRLMRDLMRSNDAPPEAFARIGIEAQ"
misc_feature 218221..>219294
/locus_tag="NGR_b02220"
/note="Arylsulfatase A and related enzymes [Inorganic ion
transport and metabolism]; Region: AslA; COG3119"
/db_xref="CDD:32933"
misc_feature 218230..219300
/locus_tag="NGR_b02220"
/note="Sulfatase; Region: Sulfatase; pfam00884"
/db_xref="CDD:201490"
gene 220070..220867
/locus_tag="NGR_b02230"
/db_xref="GeneID:7789761"
CDS 220070..220867
/locus_tag="NGR_b02230"
/EC_number="3.1.3.25"
/note="IMPase; Inositol-1-phosphatase; I-1-Pase"
/codon_start=1
/transl_table=11
/product="Inositol-1-monophosphatase"
/protein_id="YP_002822442.1"
/db_xref="GI:227818471"
/db_xref="GeneID:7789761"
/translation="MSMHEAGLDRRFALAKSIAEEAGALALDYFNKRDTLVIETKRDP
QDVVSIADRNVETLIRERVAAELPEDGFLGEEFSPVEGASGYTWVVDPIDGTAPFVNG
MSTWCVSIAVLHGGVPVIGVIHAPCDGEVYASAAGKGASLNGRKLSLDPSRTIQNAIT
GIGCNTHVEPERVGQIIATLLGMGGNFIRNGSGALMLAYVAAGRLVGYYEPHMHAWDC
MAGYCLVKEAGGDHLSFPAEGEALLKGHPVLASNPTAYADLLAIHGR"
misc_feature 220103..220831
/locus_tag="NGR_b02230"
/note="Bacterial family of Mg++ dependent phosphatases,
related to inositol monophosphatases. These enzymes may
dephosphorylate inositol monophosphate or similar
substrates; Region: Bacterial_IMPase_like_2; cd01643"
/db_xref="CDD:30141"
misc_feature order(220223..220225,220292..220297,220340..220351,
220355..220357,220715..220720)
/locus_tag="NGR_b02230"
/note="active site"
/db_xref="CDD:30141"
gene 220899..221174
/locus_tag="NGR_b02240"
/db_xref="GeneID:7789762"
CDS 220899..221174
/locus_tag="NGR_b02240"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822443.1"
/db_xref="GI:227818472"
/db_xref="GeneID:7789762"
/translation="MPIFANAAIVICMGTMNISLPDHLKSFVDEQVAGGGYGSTSEYI
RELIRRDQDRLALRRLLLDGASSAQTEPVDEHYFTSLRDRVHGQRTT"
misc_feature 220941..>221042
/locus_tag="NGR_b02240"
/note="putative addiction module antidote protein, CC2985
family; Region: antidote_CC2985; TIGR02606"
/db_xref="CDD:162947"
gene 221298..221495
/locus_tag="NGR_b02250"
/db_xref="GeneID:7789763"
CDS 221298..221495
/locus_tag="NGR_b02250"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822444.1"
/db_xref="GI:227818473"
/db_xref="GeneID:7789763"
/translation="MIASHPGSGSLRYAYELGLPDLRTVSLKRYPYLVFYRDQPGHVD
VWRVLHAKRDIPQWMQEPNSH"
misc_feature <221298..221480
/locus_tag="NGR_b02250"
/note="Plasmid stabilization system protein [General
function prediction only]; Region: ParE; COG3668"
/db_xref="CDD:33466"
gene 222054..222845
/locus_tag="NGR_b02260"
/db_xref="GeneID:7789764"
CDS 222054..222845
/locus_tag="NGR_b02260"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_002822445.1"
/db_xref="GI:227818474"
/db_xref="GeneID:7789764"
/translation="MYLTNSTMSNIEDCNKVLPKSKIVMLAKTDLFAECLTQAISARF
QDQDIVSLADADGLLDHNLIDVSLVILYSLPAAEFPSIMRTIHEFHPKAAVGVMVQNA
DELDSSIADLVDEGLVHGVLPLNLNLDVCLTAIDLLMKGGEHFPAALLRRLAPGGLAG
SGVLGQKPASSEDVDMERKTDFAQGLLRMREIQILDLICVGTPNKIIAHRLGLSENTV
KVHVRNIYKKMNVHNRTEAASRCFRSDADLASLPRSCADAPEVSA"
misc_feature 222117..222782
/locus_tag="NGR_b02260"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:32379"
misc_feature 222621..222782
/locus_tag="NGR_b02260"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(222621..222623,222660..222668,222690..222695,
222699..222704,222708..222722,222753..222755)
/locus_tag="NGR_b02260"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(222648..222650,222654..222656,222660..222662,
222753..222761,222768..222770,222777..222782)
/locus_tag="NGR_b02260"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(223044..223349)
/locus_tag="NGR_b02270"
/db_xref="GeneID:7789765"
CDS complement(223044..223349)
/locus_tag="NGR_b02270"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822446.1"
/db_xref="GI:227818475"
/db_xref="GeneID:7789765"
/translation="MAEPDRWRHMASAPKNGSRILVTIRPSEQGAAEVDLAYWSNGDQ
FGAEGWRASDSSPGRIIEYAEPELKCWMPMPSANLNRITMPSPWEGDDDQELNGSGI"
gene complement(223445..224449)
/locus_tag="NGR_b02280"
/db_xref="GeneID:7789766"
CDS complement(223445..224449)
/locus_tag="NGR_b02280"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_002822447.1"
/db_xref="GI:227818476"
/db_xref="GeneID:7789766"
/translation="MQIIQNRRTFVAGAAAAGAVSFFGKATKAWAEPPAETTRITLVR
IPSICQAPQYVAEELLRSEGFTDVRYLQKEGTADIAPALASGEADLNGHFAAPLLLHL
EAGDPIVILAGLHVGCFELFGTDRVQAIRDLKGKTVAVPTLDSSRYVFLASITAYVGL
DLHKDIHFVTHPGPESIRLLSEGKIDAYLGFPPEPQEMRERQIGHVVISSTVDRPWSQ
YFCCMLAGNREFVRAYPVATKRALRAILKAADFCASEPEQSAQFMVEQGYAKRYDHAL
QVVKALPYGWREYSAEDTLRFYALRLHEVGMLKSSPEKLLAQGTDWRFLNELKKELKS
"
misc_feature complement(223679..224350)
/locus_tag="NGR_b02280"
/note="NMT1-like family; Region: NMT1_2; pfam13379"
/db_xref="CDD:205558"
misc_feature complement(223673..224299)
/locus_tag="NGR_b02280"
/note="NMT1/THI5 like; Region: NMT1; pfam09084"
/db_xref="CDD:192206"
gene complement(224581..225072)
/locus_tag="NGR_b02290"
/db_xref="GeneID:7789767"
CDS complement(224581..225072)
/locus_tag="NGR_b02290"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822448.1"
/db_xref="GI:227818477"
/db_xref="GeneID:7789767"
/translation="MLVTNTCGVEPRPCTEPPLFFDARSGSRRRWISRQDGRIVENDK
NAVAENGAQHALGGYRVVPNEGKPFGTQQRSRDIPGGDRDRECASVPGGRLEKSSEGL
RQTQRSNLRRAYPFAFPAGISRASDKSGMRKNVCGFPPASRSNLLESITLMILGRSGL
KSS"
gene 225081..225353
/locus_tag="NGR_b02300"
/db_xref="GeneID:7789768"
CDS 225081..225353
/locus_tag="NGR_b02300"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822449.1"
/db_xref="GI:227818478"
/db_xref="GeneID:7789768"
/translation="MSGLTGLRGRLLSSRELDHDVSSAKKAAKSGSVIITSRGKPSHV
LMTYDEFERLRGRHRSLVDALAMPGLSAIDFEPHRVEIRPRDVDLS"
misc_feature <225177..225323
/locus_tag="NGR_b02300"
/note="Antitoxin Phd_YefM, type II toxin-antitoxin system;
Region: PhdYeFM_antitox; pfam02604"
/db_xref="CDD:202305"
gene complement(225526..226155)
/locus_tag="NGR_b02310"
/db_xref="GeneID:7789769"
CDS complement(225526..226155)
/locus_tag="NGR_b02310"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822450.1"
/db_xref="GI:227818479"
/db_xref="GeneID:7789769"
/translation="MSSGEFSKPEGGLVPAMQRKSPRDGRPSEGTFSAASPFPVARGP
CQPGSPVRSASTLPTFRKGLSMSSLTLRDIARKLKKIDFCMMATKASSGAIANRPMSN
NGDVEYDGDSWFFSFEDTHKVSDIIRDPRITLAFAEPPSLLGKPGIFISIEGAATLIR
DKAQFQEHWVADLERWFAQGVETPGLVLIKVHGDRIQYWDSEDNGVIHV"
misc_feature complement(225541..225960)
/locus_tag="NGR_b02310"
/note="Uncharacterized stress protein (general stress
protein 26) [General function prediction only]; Region:
COG3871"
/db_xref="CDD:33661"
misc_feature complement(225667..225924)
/locus_tag="NGR_b02310"
/note="Pyridoxamine 5'-phosphate oxidase; Region:
Pyridox_oxidase; pfam01243"
/db_xref="CDD:201681"
gene 226299..226979
/locus_tag="NGR_b02320"
/db_xref="GeneID:7789770"
CDS 226299..226979
/locus_tag="NGR_b02320"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822451.1"
/db_xref="GI:227818480"
/db_xref="GeneID:7789770"
/translation="METSLYLPIKGFLEKAGYVVKGEVGGCDLVGLSDDDPPVVVICE
LKLSFNLELILQAVDRAAIADEVWIAARVSAKGKGREADKRYRDLCRRLGIGMLGISD
AGEVSVIVGSVSPMPRTNPKRRSRLMREHQRRRGDPAVGGSTRTPVMTAYRQQALGCA
AALASGPLRVREIRCRVPDAGKILLSNVYGWFERLDRGVYGLTDAGREALQRWPQQDV
PATIAVPA"
misc_feature 226302..226976
/locus_tag="NGR_b02320"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG5482"
/db_xref="CDD:35041"
gene complement(227176..228117)
/locus_tag="NGR_b02330"
/db_xref="GeneID:7789771"
CDS complement(227176..228117)
/locus_tag="NGR_b02330"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter permease"
/protein_id="YP_002822452.1"
/db_xref="GI:227818481"
/db_xref="GeneID:7789771"
/translation="MDALEILFTASFWVAAIRIASPLIFATMGELICERAGVLNLGIE
GIMTAGAFAGWFTVYSGGDLWAGLLVAALVGAMFGLLHATLTVPLGLSQHVVGIGVTL
LATSLTYFIYRLALPEVTSPPKIEPFQPLPLPGLSSIPVVGEALFTQTPLTYLAFVSV
AAVAWILYRTPIGLAVRAAGENPSAVEAQGISVTGIRMGAVAVGSALMAVGGAFLTTS
AFNSFFFQMINGRGWICIALVVFGSWRPGKALIGAILFAAFDAYQVRLQQISGGIVPY
QAFLMMPYALSILALILVARRATYPKALMIPYQKGER"
misc_feature complement(227245..228060)
/locus_tag="NGR_b02330"
/note="Transmembrane subunit (TM) of Treponema pallidum
(Tp) RbsC-1, RbsC-2 and related proteins. This is a
functionally uncharacterized subgroup of TMs which belong
to a larger group of TMs of Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette; Region:
TM_PBP1_transp_TpRbsC_like; cd06580"
/db_xref="CDD:119322"
misc_feature complement(227512..227568)
/locus_tag="NGR_b02330"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119322"
gene complement(228119..229168)
/locus_tag="NGR_b02340"
/db_xref="GeneID:7789772"
CDS complement(228119..229168)
/locus_tag="NGR_b02340"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter permease"
/protein_id="YP_002822453.1"
/db_xref="GI:227818482"
/db_xref="GeneID:7789772"
/translation="MRLEPKPAPSLAVTLLFPLAAIATTLMLTSILVLAAGASPLSVF
YLVAKGAAGSQFALLETLTRATPLIFTGLAIAVAFRAKLWNIGAEAQLYIGGVVTVVL
GTGALPLPSAILIPVIIVAVMAAGALLLLGPAVLKTRFGVDEVVTTLLLNFIVLLFVS
MLLEGVLKDPMGLGWPQSQKVIAEAQLPRLIQGKRLHCGFVIALASAVLVWVVMKKTV
LGYEMRAVGLNPEGARFVGIPVNRALMKTALLSGGLAALAGFSEVSGLKGNLTLDLSP
GYGYTGIVVAMLAMLNPLGVIASAIFVAGIFVGADAMSRAAKVPSYIADVMVATSLLT
MVVAILLTRFWIRWR"
misc_feature complement(228155..228976)
/locus_tag="NGR_b02340"
/note="Transmembrane subunit (TM) of Treponema pallidum
(Tp) RbsC-1, RbsC-2 and related proteins. This is a
functionally uncharacterized subgroup of TMs which belong
to a larger group of TMs of Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette; Region:
TM_PBP1_transp_TpRbsC_like; cd06580"
/db_xref="CDD:119322"
misc_feature complement(228422..228478)
/locus_tag="NGR_b02340"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119322"
gene complement(229158..230687)
/locus_tag="NGR_b02350"
/db_xref="GeneID:7789773"
CDS complement(229158..230687)
/locus_tag="NGR_b02350"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002822454.1"
/db_xref="GI:227818483"
/db_xref="GeneID:7789773"
/translation="MSSNPALRLSRISKRFGPLRANEAISFDLKRGEVIALLGENGAG
KTTLMNILFGHYVADEGTVEAFGKPLPPGDPGAALDAGIGMVHQHFTLADNMTVQENI
ALGTQRLWRMRLDRAAVRRRIEQLSADFGLAVDPAATVSTLSVGERQRVEILKALYRE
ARILILDEPTAVLTPAETDALFRTLKLLVAKGLSIIFISHKLHEVMAVSDRVLVLRSG
QLVGERETGSTDRKELAALMVGREIKPAEVSPLKLGAPLLALERISTTPYNGAGLDEV
SLTLTAGEITGIAGVAGNGQAVLAALIAGIRHPTSGSISIAGREVADWSPRAALAHGV
ARIPEDRHAVGSIGDMSVAENVIAERYRSPRFSRMGFLNWKEAGRFAEKLIADYDVKC
PSPEARMRLLSGGNMQKLILGRALDPDPAVILASQPTRGLDVGAVAYVHRMLLEARDR
GAAILLISEDLEEILALSDRIIVMSKGRFSTPSSRGERTIPELGELMAGHSGEHSDHA
A"
misc_feature complement(229191..230681)
/locus_tag="NGR_b02350"
/note="ABC-type uncharacterized transport systems, ATPase
components [General function prediction only]; Region:
COG3845"
/db_xref="CDD:33636"
misc_feature complement(230019..230669)
/locus_tag="NGR_b02350"
/note="This family represents the domain I of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses...; Region: ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:72975"
misc_feature complement(230550..230573)
/locus_tag="NGR_b02350"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72975"
misc_feature complement(order(230088..230090,230184..230189,
230424..230426,230547..230555,230559..230564))
/locus_tag="NGR_b02350"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72975"
misc_feature complement(230424..230435)
/locus_tag="NGR_b02350"
/note="Q-loop/lid; other site"
/db_xref="CDD:72975"
misc_feature complement(order(230232..230237,230361..230384))
/locus_tag="NGR_b02350"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72975"
misc_feature complement(230184..230201)
/locus_tag="NGR_b02350"
/note="Walker B; other site"
/db_xref="CDD:72975"
misc_feature complement(230166..230177)
/locus_tag="NGR_b02350"
/note="D-loop; other site"
/db_xref="CDD:72975"
misc_feature complement(230082..230102)
/locus_tag="NGR_b02350"
/note="H-loop/switch region; other site"
/db_xref="CDD:72975"
misc_feature complement(229251..229928)
/locus_tag="NGR_b02350"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene complement(230820..231845)
/locus_tag="NGR_b02360"
/db_xref="GeneID:7789774"
CDS complement(230820..231845)
/locus_tag="NGR_b02360"
/codon_start=1
/transl_table=11
/product="lipoprotein periplasmic protein"
/protein_id="YP_002822455.1"
/db_xref="GI:227818484"
/db_xref="GeneID:7789774"
/translation="MHSDSFKFAISRRALIKTAGASALVAAAGLPSRLFAADPIKVAA
IYTVPVEQQWVSRIHKAANAAKERGDIEYVYSENTANNDYERVMREYCEAGHKLVLGE
VFGVEDAARAVAKDYPDVAFLMGSSFKPDAAVPNFSVFDNYIQDASYLSGLIAGAMTK
SKNIGMVGGYPIPEVNRLMNAFMAGVKEVAPDTKFQVAFIGSWFDPPKAKETAFAQID
GGADLLYAERFGVSDAAKERKILAIGNVIDTQADYPDTVVASALWHFEPTLDKAIAEV
KAGTFKADDYGVYSFMKNGGCSLAPLGTFDGKVPDDIKAKVAEKEKMIKGGSFTVEIN
DAEPKSS"
misc_feature complement(230829..231740)
/locus_tag="NGR_b02360"
/note="Uncharacterized ABC-type transport system,
periplasmic component/surface lipoprotein [General
function prediction only]; Region: Med; COG1744"
/db_xref="CDD:31930"
misc_feature complement(230988..231725)
/locus_tag="NGR_b02360"
/note="Periplasmic binding domain of the basic membrane
lipoprotein Med in Bacillus and its close homologs from
other bacteria and Archaea; Region: PBP1_BmpA_Med_like;
cd06353"
/db_xref="CDD:107348"
misc_feature complement(order(231057..231059,231108..231110,
231237..231239,231321..231323,231468..231470,
231681..231683,231702..231707))
/locus_tag="NGR_b02360"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107348"
gene 231937..232230
/locus_tag="NGR_b02370"
/db_xref="GeneID:7789775"
CDS 231937..232230
/locus_tag="NGR_b02370"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822456.1"
/db_xref="GI:227818485"
/db_xref="GeneID:7789775"
/translation="MRRKVHRAFKGGSRRFGVLGIADNPDNAIFSHHGLLEGQDYDYP
GLVDVEKIRDEILLENADICGPVPFMRMQHDQLLGLGIPEAHIHYGIRPEFIC"
misc_feature <232051..232203
/locus_tag="NGR_b02370"
/note="Ferredoxin reductase (FNR), an FAD and NAD(P)
binding protein, was intially identified as a chloroplast
reductase activity, catalyzing the electron transfer from
reduced iron-sulfur protein ferredoxin to NADP+ as the
final step in the electron transport...; Region: FNR_like;
cl06868"
/db_xref="CDD:208564"
gene complement(232413..233219)
/locus_tag="NGR_b02380"
/db_xref="GeneID:7789776"
CDS complement(232413..233219)
/locus_tag="NGR_b02380"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822457.1"
/db_xref="GI:227818486"
/db_xref="GeneID:7789776"
/translation="MERTLLKIAATAMLLLAPAIAQAAEGYATANVNMRAGPSTAYPA
ITVIPAGESIEIYGCLADVPWCDVEFYDGRGWVHGRYIQALYQQRRVYVGPQYYGRLG
IPVVVFSFSSYWDRHYRDRDFYRDRARWRRGPEFYRGPDRRAAPGRASRGPDFERPAP
PPEFERRLERSPDFSRTPERRRDFDDRPDRVPDFDRTPNRRPNVDRQPDFDRDLPSGN
RSRRNLERGGDDGNRVIRRGDDNRSRSGGDNERRRPQRRVCQPGDPECPN"
misc_feature complement(<232884..233219)
/locus_tag="NGR_b02380"
/note="Uncharacterized protein with a bacterial SH3 domain
homologue [Function unknown]; Region: COG4991"
/db_xref="CDD:34596"
misc_feature complement(232971..233132)
/locus_tag="NGR_b02380"
/note="Bacterial SH3 domain; Region: SH3_3; pfam08239"
/db_xref="CDD:116824"
gene 233680..235437
/locus_tag="NGR_b02390"
/db_xref="GeneID:7789777"
CDS 233680..235437
/locus_tag="NGR_b02390"
/codon_start=1
/transl_table=11
/product="cytochrome biogenesis protein"
/protein_id="YP_002822458.1"
/db_xref="GI:227818487"
/db_xref="GeneID:7789777"
/translation="MILFTIAYIAGVLTIVSPCILPVLPFVFSRAGQPFTRSILPMLI
GKVVTFAAVATLVAIGGDWAVHANEAGRYAAIAVLAVFSVMLLSPQFAAVVTRPAVTL
GDRLSQRAAGQKTSVGASLLLGVATGLLWAPCAGPVLGLVLTGAALHGANVGTTLLLT
AYAAGAATSLALAVLAGGRIFAAMKRSLGIGERLRQGLGIAVLAGVAAIALGLDTGLL
ARLSFAGTTDLEQSLLNRLVSDSPEAALSQSATPAVGGQQQAYRSNLPVEGIFPPLDG
AVEWLNSKPLTVEELRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYRDQGLVVIGVHA
PEFAFEKRIDNVRKAVRDFEIGYPVAIDNDFSIWRAFGNSYWPAHYFIDAEGRIRHRH
FGEGDYDQSERVIQELLAETAGSRRGDGLVKPDTKGTEAAPDLANLQSGEDYLGYVRA
GNFVSPEGVAADKARDYSVGRPRLNRWGLTGNWTVGAEQATLNRTGGSITYRFNARDL
HLVLGPGAGGRQVRFQVKVDGVAPGADSGSDIDPGGNGTVSETRLYQLVRQSGEVRER
TFEIRFLDPGVEAFVFTFG"
misc_feature 233680..>234138
/locus_tag="NGR_b02390"
/note="Cytochrome c biogenesis protein [Posttranslational
modification, protein turnover, chaperones]; Region: CcdA;
COG0785"
/db_xref="CDD:31128"
misc_feature 234493..234867
/locus_tag="NGR_b02390"
/note="TlpA-like family, DipZ-like subfamily; composed
uncharacterized proteins containing a TlpA-like TRX
domain. Some members show domain architectures similar to
that of E. coli DipZ protein (also known as DsbD). The
only eukaryotic members of the TlpA...; Region:
TlpA_like_DipZ_like; cd03012"
/db_xref="CDD:48561"
misc_feature order(234592..234594,234601..234603)
/locus_tag="NGR_b02390"
/note="catalytic residues [active]"
/db_xref="CDD:48561"
gene 235778..236581
/locus_tag="NGR_b02400"
/db_xref="GeneID:7789778"
CDS 235778..236581
/locus_tag="NGR_b02400"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase"
/protein_id="YP_002822459.1"
/db_xref="GI:227818488"
/db_xref="GeneID:7789778"
/translation="MTQKSKGTALITGASSGIGAIYADRLARRGYDLILVARNQSRLN
ELAKRLADETERAIEVVAADLGNKPDLGRVEQILRTDASITLLVNNAGVGATGPLLTS
DVDKMEEMITLNVNALTRLTYAVVPGLVARGTGAIINIASIVGIAPEVLNGVYGASKA
FVLAFTLSLQKELADRNIRIQAVLPGATATDFWDIAGTPLEHVPSEIVMPAEVMVDAA
LAGFDLGEQITIPSLPEAADWEAYEAARQTLMPNLSLRTPAARYRSAAF"
misc_feature 235778..236566
/locus_tag="NGR_b02400"
/note="Short-chain dehydrogenases of various substrate
specificities [General function prediction only]; Region:
DltE; COG0300"
/db_xref="CDD:30648"
misc_feature 235802..236464
/locus_tag="NGR_b02400"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(235814..235816,235820..235825,235829..235831,
235886..235894,236045..236053,236195..236203,
236240..236242,236252..236254,236330..236341)
/locus_tag="NGR_b02400"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(236117..236119,236201..236203,236240..236242,
236252..236254)
/locus_tag="NGR_b02400"
/note="active site"
/db_xref="CDD:187535"
gene 236639..238228
/locus_tag="NGR_b02410"
/db_xref="GeneID:7789779"
CDS 236639..238228
/locus_tag="NGR_b02410"
/codon_start=1
/transl_table=11
/product="EmrB/QacA subfamily drug resistance transporter"
/protein_id="YP_002822460.1"
/db_xref="GI:227818489"
/db_xref="GeneID:7789779"
/translation="MSTPPLTRQNLLFLATGLAGSFLVNLSAQFTSANISDIQQGLLA
GADEGSWITTAYTMGSCVGIVTSGLLIGALSIGRYLVVSSILFAAAALAGASTSELGA
MVALRSLQGFAAGGFGPAAFVAVFMVAGGPRLAHAVIILAFALLFSGTAGAAIAGYVS
DSFGWRGLFAVQAAIGAALALAACLWVPHKALNWSALRADWRSIILLSLALASLMLVL
NQGARRFWFANEIIVWGTALTAAAWASFIFVSRSSPVPIVAPRLLLTQKFGLPIGLNF
LLRAGLAVSSYLVPQFLATVEGYRPLDVSELMLWAAAAQLLALPLVWWFLHLCDLRVA
MAIGVVLLLSGIILMGSEATTSAREYFHYGLAIYAAGQLLLLTPAMIVGTGSLKPADL
PTASLTFNISNLAGTTLGVGILSSFVAERQKFHSDALTEAASLYRASDGEWVSGLVGA
VAGRVASDAGATVRAAAQIGSAARRQAWALAFGDGFLVVALMLVLGIVAVVAIGRSPP
IPRPVKFFRREKPLETENHVA"
misc_feature 236672..>237544
/locus_tag="NGR_b02410"
/note="drug resistance transporter, EmrB/QacA subfamily;
Region: efflux_EmrB; TIGR00711"
/db_xref="CDD:129794"
gene 238251..239336
/locus_tag="NGR_b02420"
/db_xref="GeneID:7789780"
CDS 238251..239336
/locus_tag="NGR_b02420"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_002822461.1"
/db_xref="GI:227818490"
/db_xref="GeneID:7789780"
/translation="MCTKAKCVTQNFPDRDALQARIGETAWQFASSRNIVSRKNPARK
LPPMHRVGFVVFPRFQLMGFAAVTAFEMANSAIGGPAYGIELLSEAGGEVKSSAGFGV
LTKSFDDTPYETVIFGAGATIEPITPGLIAFARHALETSRRVAAPCTGAFVLAEAGLL
DGRRATTHWAFARQLQERFPAVKVEDDRIFIVDGSVWTSAGMTASIDLALAMIEKDHG
QDVARCVARKLVVYHRRAGGQSQFSALLELEPKSDRIQKSIDYAKANLRGALSVEDLA
DAAGLSPRQFSRAFRSETGQSPAKAVENLRVEAARLMMEQGRHSMDVIAVETGFADPD
RMRRAFLRTLGQPPQTIRRNARDRVSA"
misc_feature 238371..239324
/locus_tag="NGR_b02420"
/note="Transcriptional regulator containing an amidase
domain and an AraC-type DNA-binding HTH domain
[Transcription]; Region: COG4977"
/db_xref="CDD:34583"
misc_feature 238401..238946
/locus_tag="NGR_b02420"
/note="AraC transcriptional regulators having a Type 1
glutamine amidotransferase (GATase1)-like domain; Region:
GATase1_AraC_1; cd03137"
/db_xref="CDD:153231"
misc_feature 238692..238694
/locus_tag="NGR_b02420"
/note="conserved cys residue [active]"
/db_xref="CDD:153231"
misc_feature 239037..239144
/locus_tag="NGR_b02420"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 239481..240527
/locus_tag="NGR_b02430"
/db_xref="GeneID:7789781"
CDS 239481..240527
/locus_tag="NGR_b02430"
/codon_start=1
/transl_table=11
/product="epoxide hydrolase"
/protein_id="YP_002822462.1"
/db_xref="GI:227818491"
/db_xref="GeneID:7789781"
/translation="MTGEINSQRRRFVGAAALTLAAAQLGMTSLAAAKSASEAGIPAI
TPGTNTSFTSFKQIEAGVLNVGYAELGAGDAPVVILLHGWPYDIHTYVDVAPLLAEAG
YRVIVPYLRGYGTTRFISEDTPRNGQQSAIAADTVALMDALGIGKAIIGGCDWGARTA
NILAALWPERCKALVSVSGYLIGSREANKMPLPPGAEHAWWYQFYFATERGRAGYERN
RKEFARLIWQLASPKWNFDDVTFDRSAAALENPDHVDITIHNYRWRISLADGEPKYDN
LEERLAKLPLIGVPTITLEGDANGAPHPKPAAYAKKFSGKYEHRLITGGIGHNLPQEA
PRAFAKAVIDVDRF"
misc_feature 239652..240521
/locus_tag="NGR_b02430"
/note="Predicted hydrolases or acyltransferases
(alpha/beta hydrolase superfamily) [General function
prediction only]; Region: MhpC; COG0596"
/db_xref="CDD:30941"
gene 240937..241353
/locus_tag="NGR_b02440"
/db_xref="GeneID:7789782"
CDS 240937..241353
/locus_tag="NGR_b02440"
/codon_start=1
/transl_table=11
/product="OsmC-like protein"
/protein_id="YP_002822463.1"
/db_xref="GI:227818492"
/db_xref="GeneID:7789782"
/translation="MTETEKVLYTGKTRTTGGREGASRSSDGRLDVKLSLPGSSKPGT
NPEQLFAAGWSACFIGAIGKAASERKVTLPVDLAVDAEVDLFHDAGAYSLQARLNVNM
PGIERDTAQALVERAHQTCPYSKATRGNIDVAISIV"
misc_feature 240958..241347
/locus_tag="NGR_b02440"
/note="peroxiredoxin, Ohr subfamily; Region:
organ_hyd_perox; TIGR03561"
/db_xref="CDD:211839"
gene 241492..242157
/locus_tag="NGR_b02450"
/db_xref="GeneID:7789783"
CDS 241492..242157
/locus_tag="NGR_b02450"
/codon_start=1
/transl_table=11
/product="glyoxalase"
/protein_id="YP_002822464.1"
/db_xref="GI:227818493"
/db_xref="GeneID:7789783"
/translation="MTTATNSERARPLDMKLEVIVVPVTNVDRAKEFYASLGWRLDAD
FADGEAFRVIQFTPPGSGASVIFGTNVTDAAPGSARGLYLIVSDIEAARDDLRRRGVD
VSEVFHAGDVHAGDDEPYLFGRLRVGGADPERRSYRSYASFSDPDGNGWLFQEVTARL
PGRVDASTTTFASAADLASAFRRAEAAHGDYEKQLGHRDEDWPTWYADYMVREQTSAP
QPS"
misc_feature 241546..241956
/locus_tag="NGR_b02450"
/note="This conserved domain belongs to a superfamily
including the bleomycin resistance protein, glyoxalase I,
and type I ring-cleaving dioxygenases; Region:
Glo_EDI_BRP_like_16; cd07263"
/db_xref="CDD:211353"
misc_feature 241549..241950
/locus_tag="NGR_b02450"
/note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily; Region: Glyoxalase; pfam00903"
/db_xref="CDD:201499"
gene 242188..243396
/locus_tag="NGR_b02460"
/db_xref="GeneID:7789784"
CDS 242188..243396
/locus_tag="NGR_b02460"
/codon_start=1
/transl_table=11
/product="oxidoreductase FAD/FMN-binding protein"
/protein_id="YP_002822465.1"
/db_xref="GI:227818494"
/db_xref="GeneID:7789784"
/translation="MQHRGTLFEPLQLPCGLTLKNRIAKSAMSDSLGDGTGHPTAEQT
RLYQRWAEGGLAVSIIGEVQLTGCYAENPGNLVLNEASNLDRFRELARHGSENGTKLW
LQLGHAGALAYAPTSNPKGPSALDLPGLRCVEVTLDEMRQLPLEFARTAWLAQQAGFG
GVEIHAAHGFLLSQFLSPLFNKRSDEYGGAIANRMRPLLEAIEATRAAVGPDFPIAVK
LNSSDQLEGGFDKEDALKVVAALDRSSVDLIDISGGTYFPGAKSASDGMGRGPYFLEF
AKRARAVTTKPLMLTGGFKTRAQAEDAVASGAVDIVGLARALVLEPSLPDLWKAERKP
EPFFPRFSDAPEGGITAWYTMRLTEIGADKETPVFGDLGQAIRDYEARNQSRTGIWLR
HFANDVVRQT"
misc_feature 242206..243177
/locus_tag="NGR_b02460"
/note="Old yellow enzyme (OYE)-related FMN binding domain,
group 2. Each monomer of OYE contains FMN as a
non-covalently bound cofactor, uses NADPH as a reducing
agent with oxygens, quinones, and alpha,beta-unsaturated
aldehydes and ketones, and can act as...; Region:
OYE_like_2_FMN; cd04733"
/db_xref="CDD:73395"
misc_feature order(242266..242268,242272..242274,242371..242373,
242497..242499,242695..242697,242851..242853,
243130..243135)
/locus_tag="NGR_b02460"
/note="putative active site [active]"
/db_xref="CDD:73395"
misc_feature order(242266..242268,242272..242274,242371..242373,
242497..242499,242851..242853,243130..243135)
/locus_tag="NGR_b02460"
/note="putative FMN binding site [chemical binding]; other
site"
/db_xref="CDD:73395"
misc_feature order(242689..242691,242695..242697)
/locus_tag="NGR_b02460"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:73395"
misc_feature 242695..242697
/locus_tag="NGR_b02460"
/note="putative catalytic residue [active]"
/db_xref="CDD:73395"
gene complement(243584..244906)
/gene="envZ"
/locus_tag="NGR_b02470"
/db_xref="GeneID:7789785"
CDS complement(243584..244906)
/gene="envZ"
/locus_tag="NGR_b02470"
/EC_number="2.7.3.-"
/codon_start=1
/transl_table=11
/product="osmolarity sensor protein EnvZ"
/protein_id="YP_002822466.1"
/db_xref="GI:227818495"
/db_xref="GeneID:7789785"
/translation="MATPAVLKGIRLWPRTLRARLFIILLAGLAIAHAMSFAALFSER
YFAARSVMFNTLENDVATSIAILDRLPAAERAGWLDQLARGSYRFVLGPGIPGNPVLE
PDDAEVASKIQAAIGAKYPVEVQSIPGAGRHLQAHLRLNDGEPLTIDVTPRGVMPVAD
WLPYVLVAQLSLLVLCSWFAMRQAIRPLANLAKAADTLDPNSNTPRLSETGPTEVANA
ATAFNAMRDRIAQYLEERVQILAAISHDLQTPITRMKLRAEMAEDSVDKDKLVQDLGE
VERLVKEGVAYARSAHGKEENASRVDLASFIESLACDYQDTGKAVTIGELSDGAIVTR
PHALRRVLTNLIDNALKFAGGAEIEVQRHDGTVLITVLDRGPGIPDGQLQAVLQPFFR
LEQSRNRDTGGTGLGLAIALQLATAIGATLTLRNRDGGGLAAEIALRQ"
misc_feature complement(244214..244354)
/gene="envZ"
/locus_tag="NGR_b02470"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(244220..244225,244232..244237,
244241..244246,244253..244258,244262..244267,
244313..244315,244319..244324,244331..244336,
244340..244345,244352..244354))
/gene="envZ"
/locus_tag="NGR_b02470"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(244061..244210)
/gene="envZ"
/locus_tag="NGR_b02470"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(244067..244069,244079..244081,
244085..244087,244136..244138,244145..244147,
244157..244159,244166..244168,244178..244180,
244190..244192))
/gene="envZ"
/locus_tag="NGR_b02470"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(244172..244174)
/gene="envZ"
/locus_tag="NGR_b02470"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(<243713..243895)
/gene="envZ"
/locus_tag="NGR_b02470"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(243863..243865)
/gene="envZ"
/locus_tag="NGR_b02470"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(243776..243778,243782..243784))
/gene="envZ"
/locus_tag="NGR_b02470"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(244906..245643)
/locus_tag="NGR_b02480"
/db_xref="GeneID:7789786"
CDS complement(244906..245643)
/locus_tag="NGR_b02480"
/codon_start=1
/transl_table=11
/product="two-component response regulator protein"
/protein_id="YP_002822467.1"
/db_xref="GI:227818496"
/db_xref="GeneID:7789786"
/translation="MEHIDHILIVDDDREIRELVSSYLKKNGLRATAVADGRQMRAFL
DGNTVDLIILDLMMPGDDGLVLSRELRVGRHKATPIVMLTARSDEMDRIIGLEMGADD
YLAKPFSARELLARIKAVLRRARMLPPNLQISEAGQLLGFGEWRLDTTARHLIDADGT
VIALSGAEYRLLRVFVDHPQRVLNRDQLLNLTQGREAELFDRSIDLLVSRVRQRLGDD
ARDPTYIKTVRSEGYVFSMPVEILEPR"
misc_feature complement(244939..245643)
/locus_tag="NGR_b02480"
/note="osmolarity response regulator; Provisional; Region:
ompR; PRK09468"
/db_xref="CDD:181883"
misc_feature complement(245281..245622)
/locus_tag="NGR_b02480"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(245323..245328,245335..245337,
245392..245394,245455..245457,245479..245481,
245608..245613))
/locus_tag="NGR_b02480"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(245479..245481)
/locus_tag="NGR_b02480"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(245455..245463,245467..245472))
/locus_tag="NGR_b02480"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(245320..245328)
/locus_tag="NGR_b02480"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(244939..245226)
/locus_tag="NGR_b02480"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature complement(order(244948..244950,244963..244965,
244999..245004,245026..245028,245035..245037,
245089..245094,245149..245151))
/locus_tag="NGR_b02480"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene complement(245837..246238)
/locus_tag="NGR_b02490"
/db_xref="GeneID:7789787"
CDS complement(245837..246238)
/locus_tag="NGR_b02490"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822468.1"
/db_xref="GI:227818497"
/db_xref="GeneID:7789787"
/translation="MRTSRIMTTALLIVGSGLALHGAKAQQAGIQRTDLVQRDLGVPG
REAVQVRVDFEPGAVSIKHSHPGEEVAYVLEGSLQYQLEGRAPVTLHAGETLFIPAGV
AHLAKNVGDGRASELATYIVEKGTPLVVPVK"
misc_feature complement(245879..246091)
/locus_tag="NGR_b02490"
/note="Cupin domain; Region: Cupin_2; pfam07883"
/db_xref="CDD:203791"
misc_binding 246627..246859
/note="NGR_b02500; B12 riboswitch, Cobalamin, RF00174"
/bound_moiety="B12"
gene 247050..248084
/locus_tag="NGR_b02510"
/db_xref="GeneID:7789788"
CDS 247050..248084
/locus_tag="NGR_b02510"
/codon_start=1
/transl_table=11
/product="Fe III ABC transporter periplasmic-binding
protein"
/protein_id="YP_002822469.1"
/db_xref="GI:227818498"
/db_xref="GeneID:7789788"
/translation="MKSIFAKSHRGIACAAAVLLAAIGVEAQAAETSYPLTLTNCGHQ
VIFQKAPDRAVSIGQSSTEILYLLGLQDRMVGTAVWIGPVINGYEEANAKVERLADND
PSFESVVARKPDLVTAQFQWHVGPEGIVARPEQFEELGVPVYTSPADCVGKDNSGGGD
GVRHTVFTMDLIYQEITELVQIFNVQERGEKLVAELKAREEAAKKKIASADGRLSAVF
WFSSAELDIDPYVAGKNGAPGYIMRSLGIRNVVDSEEEWPTVGWETIAKSGPTLVVAG
KMERRRFPADDIAVKHKFLESDPVTSLMPAVKEGHVVEMDAQAMNPTIRTIEGIEVLA
DAVEKSGLNK"
misc_feature 247149..248051
/locus_tag="NGR_b02510"
/note="Metal binding protein TroA_a. These proteins are
predicted to function as initial receptors in ABC
transport of metal ions in eubacteria. They belong to the
TroA superfamily of helical backbone metal receptor
proteins that share a distinct fold and...; Region:
TroA_a; cd01148"
/db_xref="CDD:29751"
misc_feature 247152..248060
/locus_tag="NGR_b02510"
/note="proposed F420-0 ABC transporter, periplasmic F420-0
binding protein; Region: F420-O_ABCperi; TIGR03868"
/db_xref="CDD:163580"
misc_feature 247311..247313
/locus_tag="NGR_b02510"
/note="putative ligand binding residues [chemical
binding]; other site"
/db_xref="CDD:29751"
gene 247817..249109
/locus_tag="NGR_b02520"
/db_xref="GeneID:7789789"
CDS 247817..249109
/locus_tag="NGR_b02520"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822470.1"
/db_xref="GI:227818499"
/db_xref="GeneID:7789789"
/translation="MADGRLGNHCQVRTDACRRRQDGAPPLPCRRHCRQAQVPGVRPG
HQPHACRQGGSRRRDGRPGDEPDDPDHRGHRGARRCRREIRPEQVIGITPSLSRTSAG
LLALVVLLVALWLGAAIGETAIPMGVVAKTVANRLWDAGYGLDALDEGIIWNYRVSRA
IVAACCGSALALSGVVLQSLLRNPLADPYILGISAGASTGAVAVAVLGIGAGLLTLPV
GAFVGALLAFGLVSLLAMRAGRGHGAIILAGVAGSQLFNALTSFIVTKAANAEQARAI
MFWLLGNLSGVRWPDVWVAVPVAAVGLIVCLWHARALDAFTFGSESAASLGIPVRRVY
GVLIGVTAMMTAAMVSMVGSIGFVGLVIPHVSRMIVGVRHGLLLPGSALIGAVFMIAA
DIVSRIIIPGQVLPIGVVTALVGAPAFAVILSQRRTVR"
misc_feature <248183..249097
/locus_tag="NGR_b02520"
/note="iron-hydroxamate transporter permease subunit;
Provisional; Region: PRK10577"
/db_xref="CDD:182563"
misc_feature 248297..249085
/locus_tag="NGR_b02520"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cd06550"
/db_xref="CDD:119348"
misc_feature order(248348..248350,248360..248368,248735..248740,
248744..248752,248756..248761,248765..248782,
248786..248794,248915..248917,248936..248938)
/locus_tag="NGR_b02520"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
misc_feature order(248363..248365,248369..248371,248384..248386,
248546..248548,248552..248557,248564..248569,
248576..248581,248588..248590,248597..248602,
248606..248608,248645..248650,248657..248659,
248885..248887,249041..249043,249050..249055,
249062..249064,249071..249076,249083..249085)
/locus_tag="NGR_b02520"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature order(248606..248608,248687..248689,248861..248863,
248873..248875,249005..249007,249032..249034)
/locus_tag="NGR_b02520"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
gene 249106..249909
/locus_tag="NGR_b02530"
/db_xref="GeneID:7789790"
CDS 249106..249909
/locus_tag="NGR_b02530"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002822471.1"
/db_xref="GI:227818500"
/db_xref="GeneID:7789790"
/translation="MTLAACNVSWSTGGVSILRDVSLDVVPGEFLGIVGPNGSGKTSL
MSLLAGLRRPRSGRVLLDGDAVEKLGRKDIARRIALVEQQAETSERISARRAVELGRT
PHLGPFTPWSARDDAIVDEAIRNVGMAELAARLWHTLSGGERQRLHIARALAQQPQIL
LLDEPTNHLDVGHQIGLLHLVRQQKLTAVAALHDLNHAATFCDRVALMSGGRIVASGR
PNEVLTEERIRGVFGVDADVEFHGEGRCHIRYRAPGSPAAERPMLKRIS"
misc_feature 249106..249849
/locus_tag="NGR_b02530"
/note="ABC-type cobalamin/Fe3+-siderophores transport
systems, ATPase components [Inorganic ion transport and
metabolism / Coenzyme metabolism]; Region: FepC; COG1120"
/db_xref="CDD:31317"
misc_feature 249124..249756
/locus_tag="NGR_b02530"
/note="ABC transporters, involved in the uptake of
siderophores, heme, and vitamin B12, are widely conserved
in bacteria and archaea. Only very few species lack
representatives of the siderophore family transporters.
The E. coli BtuCD protein is an ABC...; Region:
ABC_Iron-Siderophores_B12_Hemin; cd03214"
/db_xref="CDD:72973"
misc_feature 249208..249231
/locus_tag="NGR_b02530"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72973"
misc_feature order(249217..249222,249226..249234,249352..249354,
249592..249597,249682..249684)
/locus_tag="NGR_b02530"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72973"
misc_feature 249343..249354
/locus_tag="NGR_b02530"
/note="Q-loop/lid; other site"
/db_xref="CDD:72973"
misc_feature 249520..249549
/locus_tag="NGR_b02530"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72973"
misc_feature 249580..249597
/locus_tag="NGR_b02530"
/note="Walker B; other site"
/db_xref="CDD:72973"
misc_feature 249604..249615
/locus_tag="NGR_b02530"
/note="D-loop; other site"
/db_xref="CDD:72973"
misc_feature 249670..249690
/locus_tag="NGR_b02530"
/note="H-loop/switch region; other site"
/db_xref="CDD:72973"
gene 249906..250361
/locus_tag="NGR_b02540"
/db_xref="GeneID:7789791"
CDS 249906..250361
/locus_tag="NGR_b02540"
/codon_start=1
/transl_table=11
/product="pseudoazurin"
/protein_id="YP_002822472.1"
/db_xref="GI:227818501"
/db_xref="GeneID:7789791"
/translation="MIKPARLLLTTIVALSTPALAGAETVEVKMLNRGEKGSMVFEPD
FLGLQAGDSVKFIATSKSHNAATIDGMVPDGHAGFKGKINKEILVTFDQPGFYGIKCS
PHFGMGMVMLIKVGDVELPQSYRAIEVPARAKPRFDALCAAAQAEVAGK"
misc_feature 249993..250337
/locus_tag="NGR_b02540"
/note="pseudoazurin; Region: pseudoazurin; TIGR02375"
/db_xref="CDD:131428"
gene 250682..250873
/locus_tag="NGR_b02550"
/db_xref="GeneID:7789792"
CDS 250682..250873
/locus_tag="NGR_b02550"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822473.1"
/db_xref="GI:227818502"
/db_xref="GeneID:7789792"
/translation="MSEDAFNMSIRKFLKEVGITSQRKIEETVREGQTGGKKLKVRMT
LTAEGTGLNHVVDGEIELP"
gene 251217..252242
/locus_tag="NGR_b02560"
/db_xref="GeneID:7789793"
CDS 251217..252242
/locus_tag="NGR_b02560"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter ribose-binding protein"
/protein_id="YP_002822474.1"
/db_xref="GI:227818503"
/db_xref="GeneID:7789793"
/translation="MTKFIAFALGTVASIVVSASAVNAETFKIGLSNGWVGSEWRTQM
IDEAKEAAAKWKDKGVDVEVSVQSANVDVPGQIAHIRNFIAEGVNAIIVNPNSPTAFD
PIFAQAKEAGILVIATDAEVSSPDAVYVGIDQTAWGAAGAKWLAETLDGKGKVVAING
VAGHPANEMRVAGYKSVLKDFPDIQIVNEVNANWDQAQGQQAMQNILATYPDINGVVV
QDGMAAGAWKSIMDAGKKDQIAATGEIRKDFIDLWIKDKLNSGATVNPPGVMASALNV
AVLMLQGKELKEPAKAGQYGNALYLPIPFIDSKNVEKAAKQLEGKPGYYSYTSSLSIS
DAEALFK"
misc_feature 251298..252134
/locus_tag="NGR_b02560"
/note="Periplasmic sugar-binding component of
uncharacterized ABC-type transport systems that are
members of the pentose/hexose sugar-binding protein family
of the type I periplasmic binding protein superfamily;
Region: PBP1_ABC_sugar_binding_like_1; cd06300"
/db_xref="CDD:107295"
misc_feature 251301..252071
/locus_tag="NGR_b02560"
/note="Periplasmic binding protein domain; Region:
Peripla_BP_4; pfam13407"
/db_xref="CDD:205585"
misc_feature order(251334..251336,251571..251573,251724..251726,
251946..251948,252006..252008)
/locus_tag="NGR_b02560"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107295"
gene 252315..253820
/gene="rbsA1"
/locus_tag="NGR_b02570"
/db_xref="GeneID:7789794"
CDS 252315..253820
/gene="rbsA1"
/locus_tag="NGR_b02570"
/EC_number="3.6.3.17"
/codon_start=1
/transl_table=11
/product="ribose/galactose/methyl galactoside import
ATP-bindingprotein 3"
/protein_id="YP_002822475.1"
/db_xref="GI:227818504"
/db_xref="GeneID:7789794"
/translation="MSKLKLNGVSKAYGATLALRRGDLEVMAGEVHVLMGSNGSGKST
LCKIIAGSVRPDDGRILIDDTPVTITGPRSARAQGIGIFYQELSLAAHRTVEENICLA
ALPAKARLFVDRTALKERAARYIALFDGVSGDGFSADALVGNLRPDQRQLVEIMKALA
SEAPLLIFDEPTSALDRAQVERFFEILRDLKRRGRGIIFISHRMDEIKAIGDRVTIIR
DGETITTLSLGETDAGTVIRLMVGGAGDMPASQSSAPAIVDAKDGAALTVRNLSGAGF
RNVSFEVARGEILGFGGLHGQGQSALLRAIFGAGSIASGEILIGNDRFDAASPRDAIR
RGCAYVSGDRGRDGVISGRPIIENVTPIHYLRDRLMIARPSKLSDRVAPALESMHTKF
ASLFHPINSLSGGNQQKVIIARWLIDRPDVLLLDDPTKGIDLSAKADLFALIRQLAAD
GLGIILYSSEDAELLGNANRILVFNGGSVSRELTGPERTRYNLYQAAYEAA"
misc_feature 252324..253808
/gene="rbsA1"
/locus_tag="NGR_b02570"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:31325"
misc_feature 252324..252983
/gene="rbsA1"
/locus_tag="NGR_b02570"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 252420..252443
/gene="rbsA1"
/locus_tag="NGR_b02570"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(252429..252434,252438..252446,252567..252569,
252819..252824,252918..252920)
/gene="rbsA1"
/locus_tag="NGR_b02570"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 252558..252569
/gene="rbsA1"
/locus_tag="NGR_b02570"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature 252747..252776
/gene="rbsA1"
/locus_tag="NGR_b02570"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 252807..252824
/gene="rbsA1"
/locus_tag="NGR_b02570"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 252831..252842
/gene="rbsA1"
/locus_tag="NGR_b02570"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 252906..252926
/gene="rbsA1"
/locus_tag="NGR_b02570"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
misc_feature 253104..253751
/gene="rbsA1"
/locus_tag="NGR_b02570"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene 253820..254812
/locus_tag="NGR_b02580"
/db_xref="GeneID:7789795"
CDS 253820..254812
/locus_tag="NGR_b02580"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter permease"
/protein_id="YP_002822476.1"
/db_xref="GI:227818505"
/db_xref="GeneID:7789795"
/translation="MAEIATSPTYRRAGGIRRLLERYPFLPALAIVLVLLALNGFFSP
NSLSYRSLTGLLSTYMALILLAIAQTYVVYAGDIDLSAGSILSLVNVAIVVLMERWGG
GAGAVLLALALGLLLGLACGLVNGLVVAALRLQAIVATFATSIFFTGLALYILPVAGT
PAPTIFWRTYGGRLLGLPFVFYILAGLVLLLLVLGRTRLTTQLLAVGDDQQAAFQTGL
PVVSIRIRGYLLCGLFSALAAFCITGDTASGDPLVGGKMTLFSVAAVVLGGSALSGGW
GTVVGSLLGALTIGLISSVVFFMGTPSEWQNFVQGLAILVVLMAGVLAGRRARP"
misc_feature 254003..254779
/locus_tag="NGR_b02580"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature 254450..254506
/locus_tag="NGR_b02580"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene 254809..255765
/locus_tag="NGR_b02590"
/db_xref="GeneID:7789796"
CDS 254809..255765
/locus_tag="NGR_b02590"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter permease"
/protein_id="YP_002822477.1"
/db_xref="GI:227818506"
/db_xref="GeneID:7789796"
/translation="MSSVVSFLRQPIVVALVLIVLLLYLGELLSPGFASGAQILRLMI
VASLLGIVAAGQNVVILGGREGIDLSVGGVVSLSAIIAGNVMQGADIGIVPAIAACLL
AGAFFGLLNGLGVTLLRIPPLVMTLGMLGVLQGLLVVIRMGIPSGQAAPALSRFVTQP
LFFGVPGIIWLWVAIGILMAFMLNRTVFGHRIYAIGSNEHAAYMAGVPVRLMRIALFM
ISGMFAAVAGLCLLGYSGSSFANVGEQYTLTSIIAVVFGGTSLAGGKGGYTGTMAGAF
LLVILQGILTTVNIDESGRQMVFGATLLILMMFYGRGRAMRA"
misc_feature 254944..255738
/locus_tag="NGR_b02590"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature 255406..255462
/locus_tag="NGR_b02590"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene 255321..256781
/locus_tag="NGR_b02600"
/db_xref="GeneID:7789797"
CDS 255321..256781
/locus_tag="NGR_b02600"
/codon_start=1
/transl_table=11
/product="LacI family transcriptional regulator"
/protein_id="YP_002822478.1"
/db_xref="GI:227818507"
/db_xref="GeneID:7789797"
/translation="MGRDRHPHGLHAQPHRLRPPHLRDRLERARRLYGGRAGPVDAHR
ALHDLRHVRGGRRPLPARLFRLVLRQCRRAIYTDLDHRRRLRRHIARRRQGRLYRHHG
RRLPARHPAGHPHHGEHRRIRPADGIRGDPAHPHDVLWPGSGDARMRDRPKIKDIAEK
AGVSVATVSRALSDSALVTAETRQRIHDLARELNYRPNVSARNLRTRKSMAVLLVVRD
VGNPFYLDILKGVEATAREAGYAVLMGNTENDPLREIEYFNMLRDGHADGMILMTGKL
PPAGGNRAGGWNHLPVVVALEMIEGSGLPHVQVDNVGAARAAVEHLISLGHRRIAHIS
GPVPEPMSVYRREGYRLAMREAGLAIPDGYEVRGNFLLESGQECCRELLALPEPPTAL
FVANDEMAYGAAHELRRTGRDVPGEVSVVGFDDLYLSKAFYPPLTTVSQPRAEIGRTA
MGLLLSILSGGSVGGDEPIVLPTALNIRGSTAPPRG"
misc_feature 255774..256775
/locus_tag="NGR_b02600"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:31797"
misc_feature 255783..255938
/locus_tag="NGR_b02600"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature order(255783..255785,255807..255821,255825..255830,
255837..255839,255852..255857,255864..255866,
255903..255905,255912..255914,255921..255926,
255930..255935)
/locus_tag="NGR_b02600"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature 255903..255932
/locus_tag="NGR_b02600"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature 255951..256760
/locus_tag="NGR_b02600"
/note="Ligand-binding domain of an uncharacterized
transcription regulator from Actinobacillus succinogenes
and its close homologs from other bacteria; Region:
PBP1_LacI_like_6; cd06284"
/db_xref="CDD:107279"
misc_feature order(255951..255953,256014..256016,256041..256043,
256050..256052,256056..256058,256113..256115,
256434..256436,256533..256535)
/locus_tag="NGR_b02600"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107279"
misc_feature order(255981..255983,256353..256355,256590..256592,
256641..256643)
/locus_tag="NGR_b02600"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107279"
gene 256800..258044
/locus_tag="NGR_b02610"
/db_xref="GeneID:7789798"
CDS 256800..258044
/locus_tag="NGR_b02610"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="YP_002822479.1"
/db_xref="GI:227818508"
/db_xref="GeneID:7789798"
/translation="MTALPRQTLRIGFVGTGFIARFHLQSLIGVRNVEVTGVYSRKAE
NRERFAEAVRELELGICRPHGSLDHLLSAGDVDAIWILSPNYTRLEVMRTLHAEIKAG
RSQVFAVACEKPLARTVAEAREMLHLAQDAGLNHGYLENQVFCTPVLRGKEIIWRRAA
LTTGRPYLARAAEEHSGPHEPWFWQGDKQGGGVLSDMMCHSVEVARHLLTAPGAARNS
LKVKAVNGTVANLKWTRPAYADQLRQRYGNEVDYRNRPSEDFARATVTLEDEEGRELM
IEATTSWAYVGAGLRIQLELLGPEYALEYNSLGTGLKIFLSRAVKGSEGEDLVEKQNA
EQGLMPVLEDETGVYGYTDENRHMVECFRKGVKPLETFEDGLAVVEILMGLYRSAEIG
ATLHFPAPELETYVPLVARTGV"
misc_feature 256818..257996
/locus_tag="NGR_b02610"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature 256824..257201
/locus_tag="NGR_b02610"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
gene 258165..259091
/locus_tag="NGR_b02620"
/db_xref="GeneID:7789799"
CDS 258165..259091
/locus_tag="NGR_b02620"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase"
/protein_id="YP_002822480.1"
/db_xref="GI:227818509"
/db_xref="GeneID:7789799"
/translation="MQVDRSAVVGEIRRFNRFYTRTIGLLDETLTESAFTLTEARVLF
ELGHRESPAASEIATELRLDPAYLARILRRFAANGLAKARADGADRRRRILSLTEKGR
SALAELQAAADEDVARLVDDLSDEKLRELDIALRRTMELLRRSPMETPVITLRPHRIG
DIGWVVQRQAVLYAEEYGWDITYEALAAEIGAAFLRNFREGRDFCWVAERDGTPVGAV
FLVWEDDETARLRLLHVETEARGLGIGKRLVDACIDQARVSGYRRVVLWTNDVLVAAR
TLYERAGFRLIGEEGHHSFGKDLVGQTWELAL"
misc_feature 258267..>258404
/locus_tag="NGR_b02620"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
misc_feature 258270..258548
/locus_tag="NGR_b02620"
/note="helix_turn_helix multiple antibiotic resistance
protein; Region: HTH_MARR; smart00347"
/db_xref="CDD:197670"
misc_feature 258687..259016
/locus_tag="NGR_b02620"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_10; pfam13673"
/db_xref="CDD:205850"
misc_feature 258777..258965
/locus_tag="NGR_b02620"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(258861..258869,258897..258902)
/locus_tag="NGR_b02620"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 259218..260000
/locus_tag="NGR_b02630"
/db_xref="GeneID:7789800"
CDS 259218..260000
/locus_tag="NGR_b02630"
/EC_number="1.1.1.35"
/note="3-hydroxyacyl-CoA dehydrogenase type II; Type II
HADH; 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; Scully
protein"
/codon_start=1
/transl_table=11
/product="3-hydroxyacyl-CoA dehydrogenase"
/protein_id="YP_002822481.1"
/db_xref="GI:227818510"
/db_xref="GeneID:7789800"
/translation="MRSTAMLILDKVFLVTGGGSGLGAAVARMFVADGAHVIIADVNV
DAGTAIAAELGARARFVRTDVTSEADGAAAVQAALDSFGHLHGLINCAGIAPGEKVLG
RDGPHRLDSFSRAIGINLIGTFNMIRLAAAAIAREEPDLEGGRGVIVNTASVAAFDGQ
IGQAAYAAAKGGVVAMTLPIARELARSGIRVVSIAPGIFETPMMAGMPQEVQDSLGKS
VPFPPRLGRPGEYAALVRHICENDMLNGEVIRLDGALRMGAR"
misc_feature 259233..259988
/locus_tag="NGR_b02630"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature 259245..259988
/locus_tag="NGR_b02630"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(259266..259268,259272..259277,259281..259283,
259338..259346,259488..259496,259668..259676,
259713..259715,259725..259727,259803..259814)
/locus_tag="NGR_b02630"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(259572..259574,259674..259676,259713..259715,
259725..259727)
/locus_tag="NGR_b02630"
/note="active site"
/db_xref="CDD:187535"
gene complement(260011..260436)
/locus_tag="NGR_b02640"
/db_xref="GeneID:7789801"
CDS complement(260011..260436)
/locus_tag="NGR_b02640"
/codon_start=1
/transl_table=11
/product="plasmid stability protein"
/protein_id="YP_002822482.1"
/db_xref="GI:227818511"
/db_xref="GeneID:7789801"
/translation="MIILDTNVLSDLLAPAPSVSVEAWLAGQPPAVIFTTTVTEAEIL
YGVRLMPDGRPRRELEAAIALIFREDLSGRVLAFDSDAADAYASIATRRRKSGRPISQ
FDAQIAAIALSRGAALATRNVVDFADTGVVIVNPWDHRP"
misc_feature complement(260035..260430)
/locus_tag="NGR_b02640"
/note="PIN domain of ribonucleases (toxins), VapC and
FitB, of prokaryotic toxin/antitoxin operons, Pyrococcus
horikoshii protein PH0500, and other similar bacterial and
archaeal homologs; Region: PIN_VapC-FitB; cd09881"
/db_xref="CDD:189051"
misc_feature complement(order(260059..260061,260116..260121,
260125..260130,260134..260136,260155..260157,
260164..260169,260176..260181,260185..260187,
260200..260208,260212..260214,260254..260256,
260263..260265,260299..260307,260311..260319,
260323..260328,260338..260340,260362..260364,
260371..260373,260395..260403,260407..260412,
260419..260427))
/locus_tag="NGR_b02640"
/note="oligomeric interface; other site"
/db_xref="CDD:189051"
misc_feature complement(order(260071..260073,260125..260127,
260311..260313,260422..260424))
/locus_tag="NGR_b02640"
/note="putative active site [active]"
/db_xref="CDD:189051"
misc_feature complement(order(260122..260124,260128..260133,
260164..260169,260173..260181,260185..260190,
260203..260205,260248..260250,260257..260262,
260302..260307,260311..260316,260323..260328))
/locus_tag="NGR_b02640"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:189051"
gene complement(260433..260681)
/locus_tag="NGR_b02650"
/db_xref="GeneID:7789802"
CDS complement(260433..260681)
/locus_tag="NGR_b02650"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822483.1"
/db_xref="GI:227818512"
/db_xref="GeneID:7789802"
/translation="MASMTIRNLDDALKQRLRVRAAAHGRSMEDEARDILRAALSTGE
GRPRNLAAAIRDRIAPLGGVALELPAREPIREAPDFSA"
misc_feature complement(<260517..260681)
/locus_tag="NGR_b02650"
/note="Plasmid stability protein [General function
prediction only]; Region: StbC; COG4691"
/db_xref="CDD:34307"
gene complement(260711..261838)
/locus_tag="NGR_b02660"
/db_xref="GeneID:7789803"
CDS complement(260711..261838)
/locus_tag="NGR_b02660"
/codon_start=1
/transl_table=11
/product="lactose ABC transporter ATP-binding protein"
/protein_id="YP_002822484.1"
/db_xref="GI:227818513"
/db_xref="GeneID:7789803"
/translation="MSELQLNGVRKSYGGFEVIKGVDLEIKSGEFVVFVGPSGCGKST
LLRMIAGLEEITSGDLTIDDVLMNDVDPSKRGIAMVFQSYALYPHMTVRENMGFALRF
AGVPKAEIQKRVMEAANILELGSLLDRKPKQLSGGQRQRVAIGRAIVRHPKIFLFDEP
LSNLDAELRVHMRIEIARLHKQLAATIVYVTHDQVEAMTMADKIVVMRGGVVEQVGSP
LDLYDDPANLFVAGFIGSPKMNFLKGVIETVDGEVYARLPDYADTKIPVGLKGAPSGM
PVTVGIRPEHFKEQGSAALDLTIDMLEHLGGETFAYARHGNGELVVIETKNGRDLRSG
DRIAARFDPGCALVFDEGGKRLRLLEPRSEQAHLAMPAIDD"
misc_feature complement(260771..261838)
/locus_tag="NGR_b02660"
/note="glycerol-3-phosphate transporter ATP-binding
subunit; Provisional; Region: ugpC; PRK11650"
/db_xref="CDD:183258"
misc_feature complement(261191..261829)
/locus_tag="NGR_b02660"
/note="The N-terminal ATPase domain of the maltose
transporter, MalK. ATP binding cassette (ABC) proteins
function from bacteria to human, mediating the
translocation of substances into and out of cells or
organelles. ABC transporters contain two...; Region:
ABC_MalK_N; cd03301"
/db_xref="CDD:73060"
misc_feature complement(261710..261733)
/locus_tag="NGR_b02660"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(order(261263..261265,261362..261367,
261593..261595,261707..261715,261719..261724))
/locus_tag="NGR_b02660"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73060"
misc_feature complement(261593..261604)
/locus_tag="NGR_b02660"
/note="Q-loop/lid; other site"
/db_xref="CDD:73060"
misc_feature complement(261410..261439)
/locus_tag="NGR_b02660"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73060"
misc_feature complement(261362..261379)
/locus_tag="NGR_b02660"
/note="Walker B; other site"
/db_xref="CDD:73060"
misc_feature complement(261344..261355)
/locus_tag="NGR_b02660"
/note="D-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(261257..261277)
/locus_tag="NGR_b02660"
/note="H-loop/switch region; other site"
/db_xref="CDD:73060"
misc_feature complement(260792..261001)
/locus_tag="NGR_b02660"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:203932"
gene complement(261835..264099)
/gene="lacZ"
/locus_tag="NGR_b02670"
/db_xref="GeneID:7789804"
CDS complement(261835..264099)
/gene="lacZ"
/locus_tag="NGR_b02670"
/EC_number="3.2.1.23"
/note="Lactase"
/codon_start=1
/transl_table=11
/product="beta-galactosidase"
/protein_id="YP_002822485.1"
/db_xref="GI:227818514"
/db_xref="GeneID:7789804"
/translation="MRSVTSFNDSWVFSEGFNAADAGMLQAGDPVSLPHNAVELPFNY
FDETSYQRAFTYQKVIAWRPDFAGREISIVFDAAMADAVVYLNGEEIIAHKDGYTPFE
ARLTGRLRESDNLITVKIDGSENPEIPPFGGRIDYLTYAGIYRDVWLKITDPVAIANI
KIEPRDVLSDTKSVSVRCDLANPQGLAVAGTVTALLRDANGEVLAEAVGETSGESVTL
DMTGLKGLSLWDIDAPVLYQVDVQLRTDHGRDRLASHFGFRTAEFTVDGFRLNGRPLK
IRGLNRHQAFPYVGYAMGRSAQERDAELLKHKLHCNLVRTSHYPQSKWFLDHCDRIGL
LVFEEIPGWQHIGGEAWKQEAIQNVARMIERDWNHPSIVIWGVRINESQDSHDFYVET
NRLARELDPTRQTGGVRYITDSEFLEDVYTMNDFILGNEELPGSNRPRTALRPQQECT
GLSRKVPYLITEFGGHMYPTKIYDQEQRQAEHVRRHLEVLNAAHGDPSISGAIGWCMF
DYNTHKDFGSGDRICYHGVMDMFREPKFAAYVYASQCAPSEEVVMKPVTFWARGERNI
GGVLPLIVLTNCDEIELKYGSLTKRVGPDRETFPHLPHAPVVIDHRHFTKDELGVWGM
KWESAEFTGFIGGKAVAHLRMVADPLPTTLEVEADSKTLRAEGRDSVRVVVRALDQVG
NVLPFLNDAVDIAVEGPARLIGPNRLVFQGGSTGFWLGSTGAAGNISVTVTSSRVGTT
KLDLSATSEGAARV"
misc_feature complement(261922..264099)
/gene="lacZ"
/locus_tag="NGR_b02670"
/note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
transport and metabolism]; Region: LacZ; COG3250"
/db_xref="CDD:33061"
misc_feature complement(263641..264099)
/gene="lacZ"
/locus_tag="NGR_b02670"
/note="Glycosyl hydrolases family 2, sugar binding domain;
Region: Glyco_hydro_2_N; pfam02837"
/db_xref="CDD:202424"
misc_feature complement(263323..263637)
/gene="lacZ"
/locus_tag="NGR_b02670"
/note="Glycosyl hydrolases family 2; Region:
Glyco_hydro_2; pfam00703"
/db_xref="CDD:201405"
misc_feature complement(262459..263319)
/gene="lacZ"
/locus_tag="NGR_b02670"
/note="Glycosyl hydrolases family 2, TIM barrel domain;
Region: Glyco_hydro_2_C; cl15381"
/db_xref="CDD:212627"
gene complement(264108..264929)
/gene="lacG"
/locus_tag="NGR_b02680"
/db_xref="GeneID:7789805"
CDS complement(264108..264929)
/gene="lacG"
/locus_tag="NGR_b02680"
/codon_start=1
/transl_table=11
/product="lactose ABC transporter permease"
/protein_id="YP_002822486.1"
/db_xref="GI:227818515"
/db_xref="GeneID:7789805"
/translation="MRTNPSNIASAVLTYGFVGLMAFLSIFPFIWMALGATNSSIDII
KGRLLPGEALTTNIANFFTLVNLPLVFWNSAKVTIFATVLTLAVSSLAGYGFEIFRSR
HRERLYRAMLLTLMIPFAALMIPLFIMMGKMGLINTHIAVVLPTIGSAFIVFYFRQST
KAFPSELRDAAKVDGLKEWQIFFYIYVPVMRSTYAAAFIIVFMTAWNNYLWPLIVLQS
NETKTITLVISSLASAYYPDYGVVMVGTILATLPTLAVFFFMQRQFVQGMLGSVK"
misc_feature complement(264111..264929)
/gene="lacG"
/locus_tag="NGR_b02680"
/note="ABC-type sugar transport system, permease component
[Carbohydrate transport and metabolism]; Region: UgpE;
COG0395"
/db_xref="CDD:30744"
misc_feature complement(264168..264719)
/gene="lacG"
/locus_tag="NGR_b02680"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(264168..264173,264180..264185,
264192..264197,264201..264206,264213..264218,
264246..264251,264288..264293,264300..264311,
264330..264332,264339..264344,264384..264386,
264435..264437,264444..264449,264459..264461,
264465..264470,264477..264479,264483..264485,
264489..264494,264549..264551,264555..264560,
264567..264596,264600..264611,264639..264641,
264654..264659,264666..264671))
/gene="lacG"
/locus_tag="NGR_b02680"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(264294..264311,264549..264593))
/gene="lacG"
/locus_tag="NGR_b02680"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(264216..264218,264246..264248,
264255..264257,264291..264293,264507..264509,
264549..264551))
/gene="lacG"
/locus_tag="NGR_b02680"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(264363..264365,264375..264380,
264396..264434))
/gene="lacG"
/locus_tag="NGR_b02680"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(264926..265825)
/gene="lacF"
/locus_tag="NGR_b02690"
/db_xref="GeneID:7789806"
CDS complement(264926..265825)
/gene="lacF"
/locus_tag="NGR_b02690"
/codon_start=1
/transl_table=11
/product="lactose ABC transporter permease"
/protein_id="YP_002822487.1"
/db_xref="GI:227818516"
/db_xref="GeneID:7789806"
/translation="MALARRGGIGRYYDINGWLFVAPALGLIALFMVYPIVWSLWMSF
QSGRGMMMKFAGFANIARLWNDPVFIKALTNTMTYFVVQVPIMILLALILASLLNNPR
LVGRAFFRTAIFLPCVTSLVAYSVLFKGMFAFDGIVNSTLQAIGIIASPIPWQTHPFW
AKALVIIAITWRWTGYNMIFYLAALQNIDRSIYEVARIDGVPAWARFTHITIPLLKPV
ILFTTVISTIGTLQLFDEVYNLTEGKGGPSNATLTLSLYIYNLTFRFMPNFGYAATVS
YVIVVLVALLAFLQFFLAREREK"
misc_feature complement(265046..265771)
/gene="lacF"
/locus_tag="NGR_b02690"
/note="ABC-type polysaccharide transport system, permease
component [Carbohydrate transport and metabolism]; Region:
LplB; COG4209"
/db_xref="CDD:33938"
misc_feature complement(265019..>265393)
/gene="lacF"
/locus_tag="NGR_b02690"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(265019..265021,265049..265051,
265058..265060,265112..265114,265331..265333,
265391..265393))
/gene="lacF"
/locus_tag="NGR_b02690"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(265184..265186,265196..265201,
265217..265255))
/gene="lacF"
/locus_tag="NGR_b02690"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(265944..267218)
/gene="lacE"
/locus_tag="NGR_b02700"
/db_xref="GeneID:7789807"
CDS complement(265944..267218)
/gene="lacE"
/locus_tag="NGR_b02700"
/note="LBP"
/codon_start=1
/transl_table=11
/product="Lactose-binding protein"
/protein_id="YP_002822488.1"
/db_xref="GI:227818517"
/db_xref="GeneID:7789807"
/translation="MDNFARAHLPRIAALALASASLLAVTAAEAKEITIWCWDPNFNV
AIMKEAGARYTKTHPDVTFNVVDFAKTDVEQKLQTGLASGTADALPDIVLIEDYGAQK
YLQSFPGAFAPLSGTVDYSGFAPYKVEVMTVDGQVYGMPFDSGVTGLYYRKDYLEQAG
FKPEDMQNLTWDRFIEIGKEVEAKTGKKMMGLDPNDGGLVRIIMQSAGQWYFDKEGKP
NITGNPALKAAVETVGKIMSANIYKPANGWSDWVGTFTSGDVASVVTGVWITGTVKAQ
PDQAGKWGVAPIPALSIEGATHASNLGGSSWYVLESSAEKAEAIDFLNEIYGKDIDFY
QKILQDRGAVGSLLAARGGAAYEAADPFFGGEKVWQNFSDWLVKVPSVNYGVFTNEAD
LAVTAQLPALTQGMPVDDALKAIETEISGHIQ"
misc_feature complement(265962..267125)
/gene="lacE"
/locus_tag="NGR_b02700"
/note="ABC-type sugar transport system, periplasmic
component [Carbohydrate transport and metabolism]; Region:
UgpB; COG1653"
/db_xref="CDD:31839"
misc_feature complement(266229..267086)
/gene="lacE"
/locus_tag="NGR_b02700"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_1; pfam01547"
/db_xref="CDD:201851"
gene complement(267344..267781)
/locus_tag="NGR_b02710"
/db_xref="GeneID:7789808"
CDS complement(267344..267781)
/locus_tag="NGR_b02710"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822489.1"
/db_xref="GI:227818518"
/db_xref="GeneID:7789808"
/translation="MFLDASAIVAILGDEEDADLLIAKIENAATPIYYSSLSIFEAVI
SLARNKRDGALGNQVPIPPHLIDLAQQHVEAFIETIGAKELTIDSAMHRTAIDACRTY
GGVVAHPARLNFGDCFSYACAKTYRLPLLFKGDDFSQTDLEPA"
misc_feature complement(267347..267781)
/locus_tag="NGR_b02710"
/note="PIN domain of the VapC-like UPF0110 protein Mb0640
and homologs; Region: PIN_UPF0110; cd09871"
/db_xref="CDD:189041"
misc_feature complement(order(267434..267436,267659..267661,
267770..267772))
/locus_tag="NGR_b02710"
/note="putative active site [active]"
/db_xref="CDD:189041"
gene complement(267781..268026)
/locus_tag="NGR_b02720"
/db_xref="GeneID:7789809"
CDS complement(267781..268026)
/locus_tag="NGR_b02720"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822490.1"
/db_xref="GI:227818519"
/db_xref="GeneID:7789809"
/translation="MSLYIRDGAVDELAKQVQQAINAPNKTEAVRRALLNELERARQA
VPLKDRIKRLQNEVRAMGPDDPDFDMKKFADEQWGNI"
misc_feature complement(267790..268026)
/locus_tag="NGR_b02720"
/note="Rv0623-like transcription factor; Region:
PSK_trans_fac; cl01834"
/db_xref="CDD:207487"
gene complement(268152..269222)
/locus_tag="NGR_b02730"
/db_xref="GeneID:7789810"
CDS complement(268152..269222)
/locus_tag="NGR_b02730"
/codon_start=1
/transl_table=11
/product="LacI family transcriptional regulator"
/protein_id="YP_002822491.1"
/db_xref="GI:227818520"
/db_xref="GeneID:7789810"
/translation="MVTIKEIAAAVGVSSATVSRVLNYDPTLSISTRKRQAIIETAEA
LNYATPRNRGRAAAQGVGAGQKIALVHFLEPAQELADPYYVGVRLGIESRCQAMKSEI
VKVVPTGSPPEAAILEGASGVVAVGHYYGEALEWLRRHSRHLVFADYAPAGDADDSVL
SDVAMAMTRLLEAVHRMGYRRIGFIGWIDAFHEPENIHSERRCRTFIDWMVKAGLYDP
ELCLVERMTPDSGYALTKAMLSKPNPPKVLITCNDNMALGAYRAIQEMGLRIPEDIAV
ASFNDIPVAQFLGPPLSTVKIPAELIGETAVDLLLERLSGRDVAKKVVLGTEMVWRGS
TPQPVDREPGRSMAAREELRSV"
misc_feature complement(268218..269222)
/locus_tag="NGR_b02730"
/note="DNA-binding transcriptional repressor EbgR;
Provisional; Region: PRK10339"
/db_xref="CDD:182389"
misc_feature complement(268221..269027)
/locus_tag="NGR_b02730"
/note="Ligand-binding domain of DNA transcription
repressor GalR which is one of two regulatory proteins
involved in galactose transport and metabolism; Region:
PBP1_GalR; cd01544"
/db_xref="CDD:107257"
misc_feature complement(order(268428..268433,268440..268442,
268452..268454,268536..268538,268866..268874,
268887..268889,268896..268898,268911..268913,
268917..268931,268944..268949,268953..268958,
268965..268973,269025..269027))
/locus_tag="NGR_b02730"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:107257"
misc_feature complement(order(268332..268334,268383..268385,
268545..268547,268617..268619,268740..268742,
268779..268781,268845..268847,268962..268964,
268971..268976))
/locus_tag="NGR_b02730"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107257"
gene complement(269292..270227)
/locus_tag="NGR_b02740"
/db_xref="GeneID:7789811"
CDS complement(269292..270227)
/locus_tag="NGR_b02740"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_002822492.1"
/db_xref="GI:227818521"
/db_xref="GeneID:7789811"
/translation="MGNSVLQQLIDRGPVMRTVSLPRGRQSLHTMPTSTGYEIRTDGG
YDWDGRKRGQTPFTVLQHTIGGAGNLRYEHRSYRLREGDTLLLLVPHNHRYWLEEAGR
WEFFWISMNGEEALRIHRAILAVTGPVLKLQPETVEHLADCSLRLITGGEMPGSASAI
AYEAAMALYDDVFGSHPVISEEYRKMQHVIDHILSNLEKPLPVEELARVSGLSRAHFS
RIFAASEGMPPAEFVLQKRLQRAVKLLTKTADLPVKEVAILSGFDDPNYFAKVFRRVF
GASPTEFRTTGMYASVPAKTPKISESVTTLAAACD"
misc_feature complement(269781..270122)
/locus_tag="NGR_b02740"
/note="AraC-like ligand binding domain; Region:
AraC_binding; pfam02311"
/db_xref="CDD:145456"
misc_feature complement(269376..269630)
/locus_tag="NGR_b02740"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature complement(269373..269486)
/locus_tag="NGR_b02740"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 270426..271898
/gene="agaL1"
/locus_tag="NGR_b02750"
/db_xref="GeneID:7789812"
CDS 270426..271898
/gene="agaL1"
/locus_tag="NGR_b02750"
/EC_number="3.2.1.22"
/note="Melibiase"
/codon_start=1
/transl_table=11
/product="alpha-galactosidase"
/protein_id="YP_002822493.1"
/db_xref="GI:227818522"
/db_xref="GeneID:7789812"
/translation="MASFKIAIIGAGSVGFTKKLFTDILSVPELRDVEFALTDLSEHN
LGMIKSILDRIVGSNNLPTRVTATTDRRKAIEGARYIISCVRVGGLEAYADDIRIPLK
YGVDQCVGDTICAGGILYGQRNIPVILDFCKDIREVAEPGAKFLNYANPMAMNTWAAI
EYGKVDTVGLCHGVQHGAEQIAQILGAKDGELDYVCSGINHQTWFIDVRLNGRRIGKD
ELVAAFEAHPVFSKQEKLRIDVLKRFGVYSTESNGHLSEYLPWYRKRPDEITKWIDMS
DWIHGETGGYLRYSTETRNWFETEYPRFLEEAGRPLSTIKRSNEHASHILEALETGRV
YRGHFNVKNDGVITNLPADAIIESPGFVDRFGINMVSGITIPEACAATCNASINVQRM
SVHAAITGDIDLLKLAVLHDPLVGAICTPEEVWQMVDEMVVAQAEWLPQYAHAVDAAK
DRLARSTVKTREWTGAARREVRSIEEIRAEKDAAKLRAAG"
misc_feature 270432..271754
/gene="agaL1"
/locus_tag="NGR_b02750"
/note="alpha-galactosidase; Provisional; Region: PRK15076"
/db_xref="CDD:185035"
misc_feature 270435..271721
/gene="agaL1"
/locus_tag="NGR_b02750"
/note="Glycoside Hydrolases Family 4; Alpha-glucosidases
and alpha-galactosidases; Region:
GH4_alpha_glucosidase_galactosidase; cd05297"
/db_xref="CDD:133433"
misc_feature order(270459..270464,270540..270545,270555..270557,
270675..270683,270690..270695,270765..270767,
270804..270806,270867..270869,270873..270875,
270933..270935)
/gene="agaL1"
/locus_tag="NGR_b02750"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:133433"
misc_feature order(270765..270767,270873..270875,270936..270938,
271026..271028,271176..271178,271185..271187)
/gene="agaL1"
/locus_tag="NGR_b02750"
/note="sugar binding site [chemical binding]; other site"
/db_xref="CDD:133433"
misc_feature order(270936..270938,271026..271028)
/gene="agaL1"
/locus_tag="NGR_b02750"
/note="divalent metal binding site [ion binding]; other
site"
/db_xref="CDD:133433"
misc_feature order(270993..270995,271002..271004,271050..271052,
271059..271061,271419..271421,271455..271457,
271512..271517,271521..271523,271527..271538)
/gene="agaL1"
/locus_tag="NGR_b02750"
/note="putative tetramer (dimer of dimers) interface
[polypeptide binding]; other site"
/db_xref="CDD:133433"
misc_feature order(271155..271157,271191..271193,271551..271556,
271566..271568,271575..271577,271587..271589,
271596..271598,271608..271610,271626..271628,
271632..271634,271641..271646,271653..271658,
271671..271673,271677..271679,271683..271685,
271689..271691)
/gene="agaL1"
/locus_tag="NGR_b02750"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133433"
gene 272230..274311
/locus_tag="NGR_b02760"
/db_xref="GeneID:7789813"
CDS 272230..274311
/locus_tag="NGR_b02760"
/codon_start=1
/transl_table=11
/product="periplasmic alpha-galactoside-binding protein"
/protein_id="YP_002822494.1"
/db_xref="GI:227818523"
/db_xref="GeneID:7789813"
/translation="MKTHRLTTTASLLIGISAFAVQAFASEPTVVPEQPPVPAQGKIT
YVPRDSILEFKALPEYHEPEWVTEKFVKAGKLPPVAERLPKEPMVFKTGNMPDGAGVY
GDVMRHVIGGRPEGWNYSAGQTQGWGGIDIGMSECLTRTAPLYQVEASDVEPLPNLAR
SWEWSEDGHKLTMHLIEGAKWSDGDPFDADDVMFYWDDNVVDPNVSPLNGATPETFGE
GTTLKKIDQNTVEWTFKEAFPRQHLYAMAYGTFCPGPSHILKTKHPKYAGTTYDQYKN
GFPPEYMNIPVMGAWVPVAYRPDDIIVLRRNPYYWKVDEAGNQLPYLNEVHYKLSTWA
DRDVQAIAGSGDFSNLEQPENFVESLKRAANEAAPARLAFGPRVIGYNLRLNYSANGW
GEPDERAQAVRELNRNLDFRKAVTMAVDRKKLGEALVKGPFTAIYPGGLSSGTSFYDR
NSTIYYPFDLDGAKALLEKAGLKDTDGNGIVNFPEGTAGGADVQIVMLVNSDYGTDRN
LAEGLVGQMEKLGLKVVLNSVDGTKRDATQYAGKFDWLIRRNDQELTSVVQNTTQLAP
TGPRTSWHHRAPESGKVDLLPHEQELVDIVNKFIASNDNEARADLMKQFQKVSTENVD
TVGLTEYPGALIINKRFSNIPPGAPIFMFNWAEDTIIRERVFVPADKQGDYELYAEQL
PGKPGDSGPSN"
misc_feature 272479..274161
/locus_tag="NGR_b02760"
/note="The substrate-binding component of an
uncharacterized ABC-type
nickel/dipeptide/oligopeptide-like import system contains
the type 2 periplasmic binding fold; Region:
PBP2_NikA_DppA_OppA_like_4; cd08500"
/db_xref="CDD:173865"
misc_feature 272686..273861
/locus_tag="NGR_b02760"
/note="Bacterial extracellular solute-binding proteins,
family 5 Middle; Region: SBP_bac_5; pfam00496"
/db_xref="CDD:201265"
gene 274421..275434
/locus_tag="NGR_b02770"
/db_xref="GeneID:7789814"
CDS 274421..275434
/locus_tag="NGR_b02770"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter permease"
/protein_id="YP_002822495.1"
/db_xref="GI:227818524"
/db_xref="GeneID:7789814"
/translation="MFRFLLVRIASAIPVLFVLSVVTFAIIQAPPGDYSDYIRSQLIN
QGGASFEEADAQAQAYRKEHGLDKPLPIQYANWVTGIVTRGDFGHSLYYNKPVADVVG
ERLPRTLALALVCHILASVIGIGFGILAATRQYSWVDSLLSTVSFLGMTVPRFLMALI
IVYVLVFHFNVSEINSFHSARYGGAPWSWDKFVDLVKHVWPVVAIATFGGLAYNMRVM
RGNLLDTLNAQYVETARAKGLSEGAVVMRHAVPNALHPLIMYQGVVLPYMLTGEIETA
IIFALPTVGPAIVGSMWVGDVYVTATFMLVLSATLIVGNIIADMLLAALDPRVRMGGG
AYA"
misc_feature 274421..275419
/locus_tag="NGR_b02770"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppB; COG0601"
/db_xref="CDD:30946"
misc_feature 274733..275371
/locus_tag="NGR_b02770"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(274781..274786,274793..274798,274811..274813,
274844..274855,274859..274888,274895..274900,
274904..274906,275042..275047,275051..275053,
275057..275059,275066..275071,275075..275077,
275090..275095,275102..275104,275153..275155,
275195..275200,275207..275209,275228..275239,
275246..275251,275288..275293,275321..275326,
275333..275338,275342..275347,275354..275359,
275366..275371)
/locus_tag="NGR_b02770"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(274862..274906,275228..275245)
/locus_tag="NGR_b02770"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(274904..274906,275027..275029,275246..275248,
275282..275284,275291..275293,275321..275323)
/locus_tag="NGR_b02770"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(275105..275143,275159..275164,275174..275176)
/locus_tag="NGR_b02770"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 275431..276558
/locus_tag="NGR_b02780"
/db_xref="GeneID:7789815"
CDS 275431..276558
/locus_tag="NGR_b02780"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822496.1"
/db_xref="GI:227818525"
/db_xref="GeneID:7789815"
/translation="MTIEAHSTVPVAMQPEEKHHHESYTALVWRRLKRSWTGLLGLIL
VSLLILMAIFADFLSPVDPKATGVAFAPPQAISFTDKDGNFVFSPRSYPVRETEELDP
ITFQPVIGPDYENPQILGFFVQGAPYRLLGLIPAERHFFGAVDGTPVHLLGTDKFGRD
VLSRILYGSRISLIIALTVVSIVTVVGTTVGMVSGYFGGRFDAWMQRFVELVLAFPQL
PLYLALASLIPVTAPTNVFLAFVVIVMSALGWAQMSREVRGKTLALARIDYVRAAIAI
GATDRRIIFQHIFPNVMSHVIVAVTLAIPQVVLLESFLGFLGFAVKPPLISWGLMLQD
TANYSAIGSYPWILSPVAFVLVTVFAFNALGDGLRDAIDPY"
misc_feature <275866..276552
/locus_tag="NGR_b02780"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppC; COG1173"
/db_xref="CDD:31366"
misc_feature 276016..276534
/locus_tag="NGR_b02780"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(276043..276054,276058..276087,276094..276099,
276103..276105,276172..276177,276181..276183,
276187..276189,276196..276201,276205..276207,
276217..276222,276229..276231,276280..276282,
276322..276327,276334..276336,276355..276366,
276373..276378,276418..276423,276484..276489,
276496..276501,276505..276510,276517..276522,
276529..276534)
/locus_tag="NGR_b02780"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(276061..276105,276355..276372)
/locus_tag="NGR_b02780"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(276103..276105,276157..276159,276373..276375,
276412..276414,276421..276423,276484..276486)
/locus_tag="NGR_b02780"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(276232..276270,276286..276291,276301..276303)
/locus_tag="NGR_b02780"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 276570..278240
/locus_tag="NGR_b02790"
/db_xref="GeneID:7789816"
CDS 276570..278240
/locus_tag="NGR_b02790"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_002822497.1"
/db_xref="GI:227818526"
/db_xref="GeneID:7789816"
/translation="MATIESIVPAPEERTDRHTKETRPVIDARKVAVNFKVENGTVEA
VKDVSFQLYRGETVAIVGESGSGKSVTARTIMGLLSKRATIASHSRIEYDGRDVLKFS
KRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRRMSRRAAAARALELLQH
VQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDSDVLIADEPTTALDVTVQAQILNL
IRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTAALFANPQHVYTRRL
LASEPSGSAKPLPDNAPIVLDGRNVRVSFMLKKGGFFKPELKELVAVDSLSLNLRRHE
TLGLVGESGSGKTTFGQALIRLINTDAGEIFFEGEPIHGKDRKGMRPLRSRIQIVFQD
PFASLNPRMSIGQIIEEGLIVNGIGENRKDRLARVQDALISAGMPANILSRFPHEFSG
GQRQRIAIARAIALEPEFILLDEPTSALDLSVQAQIIELLRKLQDERGLSYLFISHDL
KVVRALCHRVVVMQHGKIVEEGPVSEILSNPKTAYTERLVRAAFEVAA"
misc_feature 276633..278234
/locus_tag="NGR_b02790"
/note="ABC-type uncharacterized transport system,
duplicated ATPase component [General function prediction
only]; Region: COG4172"
/db_xref="CDD:33913"
misc_feature 276642..277346
/locus_tag="NGR_b02790"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature 276753..276776
/locus_tag="NGR_b02790"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature order(276762..276767,276771..276779,276924..276926,
277170..277175,277272..277274)
/locus_tag="NGR_b02790"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature 276915..276926
/locus_tag="NGR_b02790"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature 277098..277127
/locus_tag="NGR_b02790"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature 277158..277175
/locus_tag="NGR_b02790"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature 277182..277193
/locus_tag="NGR_b02790"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature 277260..277280
/locus_tag="NGR_b02790"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature 277347..>277469
/locus_tag="NGR_b02790"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:212282"
misc_feature 277452..278159
/locus_tag="NGR_b02790"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature 277587..277610
/locus_tag="NGR_b02790"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature order(277596..277601,277605..277613,277740..277742,
277983..277988,278085..278087)
/locus_tag="NGR_b02790"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature 277731..277742
/locus_tag="NGR_b02790"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature 277911..277940
/locus_tag="NGR_b02790"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature 277971..277988
/locus_tag="NGR_b02790"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature 277995..278006
/locus_tag="NGR_b02790"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature 278073..278093
/locus_tag="NGR_b02790"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature 278148..>278231
/locus_tag="NGR_b02790"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:212282"
gene 278264..279637
/gene="agaL2"
/locus_tag="NGR_b02800"
/db_xref="GeneID:7789817"
CDS 278264..279637
/gene="agaL2"
/locus_tag="NGR_b02800"
/codon_start=1
/transl_table=11
/product="alpha-galactosidase"
/protein_id="YP_002822498.1"
/db_xref="GI:227818527"
/db_xref="GeneID:7789817"
/translation="MTRQPKITFIGAGSTVFMKNIIGDVLQRPALSAATIALMDLNPE
RLAESEIVAGKLVRTLGVKAKVETYSNQLKALEGADFVVVAFQIGGYEPCTVTDFEVP
KKYGLRQTIADTLGVGGIMRGLRTVPHLWKICEDMLKVCPEAILLQYVNPMAINTWAI
AEKYPTIRQVGLCHSVQGTAFELARDLDIPLEEIRYRAAGINHMAFYLKFEHRQKDGS
YRDLYPDLIRGYREGRFPKPSHWNPRCPNKVRYEMLTRLGYFVTESSEHFAEYTPYFI
KDGRPDLIEKFGIPLDEYPKRCIEQIERWKGQAAAFKEAETIEVAESHEYASSIMNSV
WTGEPSVIYGNLRNNGCITSLPENCAAEVPCLVDASGIQPTYIGALPPQLTALIRTNI
NVQELTVQALVTENREHLYHAAMMDPHTAAELDLDQIWSLVDDLLVAHRDWIPEWARV
SKKVQAA"
misc_feature 278276..279607
/gene="agaL2"
/locus_tag="NGR_b02800"
/note="alpha-galactosidase; Provisional; Region: PRK15076"
/db_xref="CDD:185035"
misc_feature 278276..279574
/gene="agaL2"
/locus_tag="NGR_b02800"
/note="Glycoside Hydrolases Family 4; Alpha-glucosidases
and alpha-galactosidases; Region:
GH4_alpha_glucosidase_galactosidase; cd05297"
/db_xref="CDD:133433"
misc_feature order(278300..278305,278381..278386,278396..278398,
278516..278524,278531..278536,278609..278611,
278648..278650,278708..278710,278714..278716,
278777..278779)
/gene="agaL2"
/locus_tag="NGR_b02800"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:133433"
misc_feature order(278609..278611,278714..278716,278780..278782,
278870..278872,279053..279055,279062..279064)
/gene="agaL2"
/locus_tag="NGR_b02800"
/note="sugar binding site [chemical binding]; other site"
/db_xref="CDD:133433"
misc_feature order(278780..278782,278870..278872)
/gene="agaL2"
/locus_tag="NGR_b02800"
/note="divalent metal binding site [ion binding]; other
site"
/db_xref="CDD:133433"
misc_feature order(278837..278839,278846..278848,278894..278896,
278918..278920,279272..279274,279308..279310,
279365..279370,279374..279376,279380..279391)
/gene="agaL2"
/locus_tag="NGR_b02800"
/note="putative tetramer (dimer of dimers) interface
[polypeptide binding]; other site"
/db_xref="CDD:133433"
misc_feature order(279032..279034,279068..279070,279404..279409,
279419..279421,279428..279430,279440..279442,
279449..279451,279461..279463,279479..279481,
279485..279487,279494..279499,279506..279511,
279524..279526,279530..279532,279536..279538,
279542..279544)
/gene="agaL2"
/locus_tag="NGR_b02800"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133433"
gene complement(279808..279996)
/locus_tag="NGR_b02810"
/db_xref="GeneID:7789818"
CDS complement(279808..279996)
/locus_tag="NGR_b02810"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822499.1"
/db_xref="GI:227818528"
/db_xref="GeneID:7789818"
/translation="MTFVPYTCRIYARTLRVISGFGHFGSLARMRTPYMRFLFVRPAL
CLQLSFRPRLATTPLLFG"
gene 280450..280635
/locus_tag="NGR_b02820"
/db_xref="GeneID:7789819"
CDS 280450..280635
/locus_tag="NGR_b02820"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822500.1"
/db_xref="GI:227818529"
/db_xref="GeneID:7789819"
/translation="MEKKPDRPKNKGESGTARKNQPGHVGGDQARKAQEWDGGSKGSK
GPVTEKDKHNPNSSAKT"
gene complement(280895..281620)
/locus_tag="NGR_b02830"
/db_xref="GeneID:7789820"
CDS complement(280895..281620)
/locus_tag="NGR_b02830"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822501.1"
/db_xref="GI:227818530"
/db_xref="GeneID:7789820"
/translation="MPDFDRDGRTAAAQGTSTMTAFFDSRRDAEAAVERLHKAELGAA
SVQLVLGIGERCSDFEREGIWSAIENFFFPDEDREIYAEGLARGGYLVTVSGIDDQSY
AAVRDILDDEGTIDLDERADLWRSEGWSGWQGGGVAPNALPTGSTEDTFDAPRPAAAT
RDHVRSSGTVRTYRTESASAPVSVHETPPRGIYEPQPHSPNSGAWPQAEADASGGFRQ
EQDGRSQSQQIGSGWSQSQKCGS"
gene complement(281759..283105)
/locus_tag="NGR_b02840"
/db_xref="GeneID:7789821"
CDS complement(281759..283105)
/locus_tag="NGR_b02840"
/codon_start=1
/transl_table=11
/product="dicarboxylate carrier protein"
/protein_id="YP_002822502.1"
/db_xref="GI:227818531"
/db_xref="GeneID:7789821"
/translation="MGIEILSILLLVGMFIIATIQPINMGALAFGCTFLLGSLIIGMK
ANDIFAGFPSDLFLTLVAVTYLFAIAQINCTIDWLVECAVRLVRGHVVWIPWVMFLVA
AVITGFGALGPAAVAILAPVALSFAVQYRIHPAMMGLMVIHGAQAGGFSPISVYGGIT
NQIVVKAGLPFAPTSLFLSSFFFNLAIAVLVFFVFGGAKIMRQRPATAGPLPELHPEG
VSASIRGHGGTPAKPIREHAYGTAADTLQTLRLTPEMIFTLGGLTALGIGALVFKFNV
GLVAITVAVVLALISPKTQKAAIDKVSWSTVLLITGIITYVGVMEKAGTIDYVASGIS
SLGMPLLVALLLCFTGAIVSAFASSTALLGAIIPLAVPFLLQGHISAIGVVAAIAIST
TIVDTSPFSTNGALVVANAPDEKREHVLRQLLIYSALIAIIGPVVAWLVFVVPGLV"
misc_feature complement(282659..283105)
/locus_tag="NGR_b02840"
/note="Dicarboxylate carrier protein MatC N-terminus;
Region: MatC_N; pfam07158"
/db_xref="CDD:115789"
misc_feature complement(281987..>282205)
/locus_tag="NGR_b02840"
/note="Anion permease ArsB/NhaD. These permeases have
been shown to translocate sodium, arsenate, antimonite,
sulfate and organic anions across biological membranes in
all three kingdoms of life. A typical anion permease
contains 8-13 transmembrane helices...; Region:
ArsB_NhaD_permease; cl15356"
/db_xref="CDD:213135"
gene complement(283203..284717)
/locus_tag="NGR_b02850"
/db_xref="GeneID:7789822"
CDS complement(283203..284717)
/locus_tag="NGR_b02850"
/note="catalyzes the formation of malonyl-CoA from
malonate and CoA"
/codon_start=1
/transl_table=11
/product="malonyl-CoA synthase"
/protein_id="YP_002822503.1"
/db_xref="GI:227818532"
/db_xref="GeneID:7789822"
/translation="MSNHLFDAIRTAATGDAPFIRINGGRTWTYDDALDLSGRIASAI
DALGIRPGDRVAVQVEKSAEALILYLACLRSGAVYLPLNTAYTLAELDYFIGDAEPRL
VVVSPAAREGVRTIAEPHGAIVETLDADGTGSLLDLARDEPAGFVDASRSADDLAAIL
YTSGTTGRSKGAMLTHGNLLSNATTLRDSWRITAADRLIHALPLFHTHGLFVATNVTL
LAGASLFLLPKFDPDEILSLMPEATLLMGVPTFYVRLLQSPRLDRQAVASMRLFISGS
APLLAETHVEFRKRTGHAILERYGMTETNMNTSNPYDGERIAGTVGFPLPGVTVRVTD
PTTGAPLPPEETGMIEIRGANVFKGYWRMPEKTAAEFTADGFFISGDLGKIDRDGYVH
IVGRSKDLVISGGYNIYPKEVEGEIDQLEGVAESAVIGVPHPDFGEGVTAIVVRKPEA
AIDESAILGALNDRLARYKQPKRIIFADDLPRNTMGKVQKNVLRQQYADLYGKR"
misc_feature complement(283212..284717)
/locus_tag="NGR_b02850"
/note="malonyl-CoA synthase; Validated; Region: PRK07514"
/db_xref="CDD:181011"
misc_feature complement(283434..284633)
/locus_tag="NGR_b02850"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
misc_feature complement(<283227..283316)
/locus_tag="NGR_b02850"
/note="Domain of unknown function (DUF4009); Region:
DUF4009; pfam13193"
/db_xref="CDD:205374"
gene complement(284714..286135)
/locus_tag="NGR_b02860"
/db_xref="GeneID:7789823"
CDS complement(284714..286135)
/locus_tag="NGR_b02860"
/codon_start=1
/transl_table=11
/product="MCD, Malonyl-CoA decarboxylase MCD"
/protein_id="YP_002822504.1"
/db_xref="GI:227818533"
/db_xref="GeneID:7789823"
/translation="MPGTSFFSDMLQGITERGRKLLFAGSRAADVAAEANLETLCEML
LSSRGEASGMAIAAEILARWSKLDSDGVEAFLHVLSEKFGADTVKLDKAVDRYRTEKS
PSAIIALHGAAEPRRQELLRRLNHAPGGTAKLVRIRQQLLASKDRSDEFRAVDSDFAH
LFSSWFNRGFLTLRPIDWSTPAHILEKIIKYEAVHEIAGWEELRRRLAPADRRCFAFF
HPRLTDEPLVFVEVALARSVPGAIRDVLDEGREQIDPDQATTAVFYSISNCQEGLRGI
SFGNFLIKQVVEDLRRDLPGLRNFVTLSPVPGFARWLARARTSEAEPLLTEEDRKVLG
LLDDPAWVDDANAANEIERVLLPLAAHYFLIERTPEGRPVDPVARFHLGNGARLDRLN
FLGDRSAKAMQQGHGLMVNYLYKLEDIEANHEALAQRGEVTASPAVKSLLGRNGESRR
GGRSEISRPFAQVMNDRTGGGRK"
misc_feature complement(284891..285901)
/locus_tag="NGR_b02860"
/note="Malonyl-CoA decarboxylase (MCD); Region: MCD;
pfam05292"
/db_xref="CDD:114040"
gene 286305..286955
/locus_tag="NGR_b02870"
/db_xref="GeneID:7789824"
CDS 286305..286955
/locus_tag="NGR_b02870"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_002822505.1"
/db_xref="GI:227818534"
/db_xref="GeneID:7789824"
/translation="MSENVGRWLRDEIENAILSNEFAPGERLDEMVLASRFGVSRTPV
REALMQLNAIGLIEIRPRRGAVVIDPGPHRIYEMFEVMAELEGLAGSLAARRLDERSR
QAITAAHERCEHSAEAGDSDAYYYDNEEFHRAIYAASRSDFLEEQCTQLHRRLRPYRR
LQLRVRNRLTTSFSEHCGIVDAIFAGDGDEARRLLRSHVGIQGERFSDLVASMAAR"
misc_feature 286329..286505
/locus_tag="NGR_b02870"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature 286335..286952
/locus_tag="NGR_b02870"
/note="Transcriptional regulators [Transcription]; Region:
FadR; COG2186"
/db_xref="CDD:32369"
misc_feature order(286389..286391,286392..286397,286419..286433,
286437..286442,286449..286451,286479..286484,
286488..286499)
/locus_tag="NGR_b02870"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature 286533..286901
/locus_tag="NGR_b02870"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:203742"
gene 287068..287370
/locus_tag="NGR_b02880"
/db_xref="GeneID:7789825"
CDS 287068..287370
/locus_tag="NGR_b02880"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822506.1"
/db_xref="GI:227818535"
/db_xref="GeneID:7789825"
/translation="MGKNADLTKLKKARRQNAAGWWKLEDAKARFSEVVRHAREDGPQ
RVTVRGRDAVVIMSAEEFDRLVPEKPRAPFIEFMESLHLAELDLEREMDRGRDIEL"
misc_feature 287131..287262
/locus_tag="NGR_b02880"
/note="prevent-host-death family protein; Region: phd_fam;
TIGR01552"
/db_xref="CDD:200116"
gene 287367..287831
/locus_tag="NGR_b02890"
/db_xref="GeneID:7789826"
CDS 287367..287831
/locus_tag="NGR_b02890"
/codon_start=1
/transl_table=11
/product="plasmid stability protein"
/protein_id="YP_002822507.1"
/db_xref="GI:227818536"
/db_xref="GeneID:7789826"
/translation="MKGWLLDTNVVAALINPRGAPSVKTWAADQDEEAIYISILTLAE
YDKGIHNLPEDHTDRPRYMAARDALAERFGRRVLSLDDVVVRRWGRISGEVKRDSGHA
PPVIDTMLAATAIEHDLYLVTRNVKDARPSGATIFDPWNDDAEKFPLSPRGR"
misc_feature 287379..287750
/locus_tag="NGR_b02890"
/note="PIN domain of ribonucleases (toxins), VapC and
FitB, of prokaryotic toxin/antitoxin operons, Pyrococcus
horikoshii protein PH0500, and other similar bacterial and
archaeal homologs; Region: PIN_VapC-FitB; cd09881"
/db_xref="CDD:189051"
misc_feature order(287382..287390,287397..287402,287406..287414,
287436..287438,287445..287447,287469..287471,
287481..287486,287490..287498,287502..287510,
287556..287558,287565..287567,287595..287597,
287601..287609,287622..287624,287628..287633,
287640..287645,287652..287654,287676..287678,
287682..287687,287691..287696)
/locus_tag="NGR_b02890"
/note="oligomeric interface; other site"
/db_xref="CDD:189051"
misc_feature order(287385..287387,287496..287498,287685..287687,
287739..287741)
/locus_tag="NGR_b02890"
/note="putative active site [active]"
/db_xref="CDD:189051"
misc_feature order(287481..287486,287493..287498,287502..287507,
287559..287564,287571..287573,287604..287606,
287619..287624,287628..287636,287640..287645,
287679..287684,287688..287690)
/locus_tag="NGR_b02890"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:189051"
gene complement(288022..288627)
/gene="thiE"
/locus_tag="NGR_b02900"
/db_xref="GeneID:7789827"
CDS complement(288022..288627)
/gene="thiE"
/locus_tag="NGR_b02900"
/note="Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole
monophosphate and 4-amino-5-hydroxymethyl pyrimidine
pyrophosphate to form thiamine monophosphate"
/codon_start=1
/transl_table=11
/product="thiamine-phosphate pyrophosphorylase"
/protein_id="YP_002822508.1"
/db_xref="GI:227818537"
/db_xref="GeneID:7789827"
/translation="MTLDPFYLIVDSARWIERLVPLGVKLVQLRIKERSDEDIRNQIR
IAKSICTAHRCQLIVNDFWRLAIEEGCDFVHLGQEDLAEADLGAIRAAGLKLGLSTHD
EAELEAALAAAPDYVALGPIYPTILKKMKWAPQGLARLSAWRERVHPLPLVAIGGLNP
ERIDGVFAHGADSAAVVTDITLNADPEARTREWIRKTEAWR"
misc_feature complement(288043..288612)
/gene="thiE"
/locus_tag="NGR_b02900"
/note="Thiamine monophosphate synthase (TMP
synthase)/TenI. TMP synthase catalyzes an important step
in the thiamine biosynthesis pathway, the substitution of
the pyrophosphate of 2-methyl-4-amino-5-
hydroxymethylpyrimidine pyrophosphate by 4-methyl-5-;
Region: TMP_TenI; cd00564"
/db_xref="CDD:73367"
misc_feature complement(order(288094..288105,288157..288159,
288169..288171,288247..288249,288253..288255,
288274..288276,288280..288282,288331..288333,
288403..288405,288538..288540,288544..288546,
288601..288603,288607..288609))
/gene="thiE"
/locus_tag="NGR_b02900"
/note="thiamine phosphate binding site [chemical binding];
other site"
/db_xref="CDD:73367"
misc_feature complement(order(288094..288099,288157..288159,
288244..288249,288253..288255,288331..288333,
288388..288390,288445..288450,288532..288534,
288538..288540,288544..288546))
/gene="thiE"
/locus_tag="NGR_b02900"
/note="active site"
/db_xref="CDD:73367"
misc_feature complement(order(288244..288246,288331..288333,
288388..288390,288397..288399,288445..288450,
288532..288534,288538..288540))
/gene="thiE"
/locus_tag="NGR_b02900"
/note="pyrophosphate binding site [ion binding]; other
site"
/db_xref="CDD:73367"
gene complement(288624..289397)
/gene="thiG"
/locus_tag="NGR_b02910"
/db_xref="GeneID:7789828"
CDS complement(288624..289397)
/gene="thiG"
/locus_tag="NGR_b02910"
/note="functions in thiamine (vitamin B1) biosynthesis; in
Bacillus subtilis this enzyme catalyzes the formation of
thiazole from dehydroxyglycine and
1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate"
/codon_start=1
/transl_table=11
/product="thiazole synthase"
/protein_id="YP_002822509.1"
/db_xref="GI:227818538"
/db_xref="GeneID:7789828"
/translation="MPQFYGTDMRSRLLLGTARYPSPAILAEAVRRSRTDIVTVSLRR
ETAGGRQGGAFFELIRELGVRVLPNTAGCHSVSEAVLTAKMAREVFATDWIKLEVIGH
HDTLQPDVFGLVEAARILTGEGFEVFPYTTDDLVVAERLLAAGCQVLMPWCAPIGSAM
GPQNLAALRAMRAEFPDVPLIVDAGIGRPSHAATVMELGYDAVLLNTAVAGADDPAAM
AEAFAAAIEAGHMAHGAGMLEPRDMAVPSTPVIGKAVFS"
misc_feature complement(288648..289385)
/gene="thiG"
/locus_tag="NGR_b02910"
/note="Thiazole synthase (ThiG) is the tetrameric enzyme
that is involved in the formation of the thiazole moiety
of thiamin pyrophosphate, an essential ubiquitous cofactor
that plays an important role in carbohydrate and amino
acid metabolism. ThiG catalyzes...; Region: ThiG; cd04728"
/db_xref="CDD:73390"
misc_feature complement(order(289227..289229,289236..289238,
289275..289277))
/gene="thiG"
/locus_tag="NGR_b02910"
/note="ThiS interaction site; other site"
/db_xref="CDD:73390"
misc_feature complement(order(288849..288851,289104..289106,
289110..289112))
/gene="thiG"
/locus_tag="NGR_b02910"
/note="putative active site [active]"
/db_xref="CDD:73390"
misc_feature complement(order(288651..288653,288657..288665,
288669..288671,288675..288680,288684..288698,
288702..288707,288714..288716,288735..288737,
288744..288749,288756..288764,288777..288779,
288804..288809,288816..288818,288828..288836,
288879..288881,288891..288893,288909..288911,
288918..288926,288978..288983,288990..288998,
289002..289004,289071..289079,289086..289088,
289095..289097))
/gene="thiG"
/locus_tag="NGR_b02910"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:73390"
gene complement(289400..290776)
/locus_tag="NGR_b02920"
/db_xref="GeneID:7789829"
CDS complement(289400..290776)
/locus_tag="NGR_b02920"
/codon_start=1
/transl_table=11
/product="thiamine biosynthesis oxidoreductase ThiO"
/protein_id="YP_002822510.1"
/db_xref="GI:227818539"
/db_xref="GeneID:7789829"
/translation="MRVLIKGAGVAGLTSAHELVARGAEVMVSDPSPGFASAASWYAG
GMLAPWCERESAEEAVLTRGIGAADWWEAVLPAGSVHRNGTLVVAPPRDAAELKRFAS
RTSGFRWIGAEEIGALEPALAGRFRQALFFAEEAHLDPRLALSTLRQGLEAQGVVFSG
GPIDEGRFDLTIDCTGAAQIGDIEGLRGVRGEMLYLQTEEVALSRPVRLLHPRIPLYI
VPRSGGLFMCGATMIESDDAGPMTARSLMEILNGAYTLHPAFAEARLVETGTGVRPAY
ADNLPRVSRHESTITVNGLYRHGFLLSPALAEEVAALALGQPCGRPLPNPPPQGGGAK
QPLRSPAIFDHRARCKGRDRGGGNAAEEAPPPCGEGLGRGEIRRVWRGMRKGFSERKC
PMKFTINGEEHELPATTVADLLLLLEYEGEWLATAVNGELVHGADRARHRLSESDRIE
ILSPMQGG"
misc_feature complement(289877..290728)
/locus_tag="NGR_b02920"
/note="glycine oxidase ThiO; Region: thiamin_ThiO;
TIGR02352"
/db_xref="CDD:162817"
misc_feature complement(289403..289594)
/locus_tag="NGR_b02920"
/note="ThiaminS ubiquitin-like sulfur carrier protein;
Region: ThiS; cd00565"
/db_xref="CDD:176353"
misc_feature complement(order(289421..289429,289481..289483))
/locus_tag="NGR_b02920"
/note="thiS-thiF/thiG interaction site; other site"
/db_xref="CDD:176353"
gene complement(290778..292610)
/gene="thiC"
/locus_tag="NGR_b02930"
/db_xref="GeneID:7789830"
CDS complement(290778..292610)
/gene="thiC"
/locus_tag="NGR_b02930"
/note="required for the synthesis of the
hydromethylpyrimidine moiety of thiamine"
/codon_start=1
/transl_table=11
/product="thiamine biosynthesis protein ThiC"
/protein_id="YP_002822511.1"
/db_xref="GI:227818540"
/db_xref="GeneID:7789830"
/translation="MNVFKPLAAAPSVTQGPLPASRKVYKPGEIHAGIRVPMREIALH
PTSGEPAVTVYDASGPYTLENADIRIDAGLPRLRRDWILARGDVDSYEGRTVKAEDNG
FATGERLTPEFPVRHQPLKAKPGQAVTQLAYARAGIITPEMEFIAIRENLGRKAAKEA
LARDGESFGAAVPDFVTPEFVRQEVASGRAIIPANINHPESEPMIIGRNFLVKINANI
GNSAVTSSMAEEVEKMVWATRWGADTVMDLSTGRNIHNIREWIIRNSPVPIGTVPLYQ
ALEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVRLHYIPLTVSRVTGIVSRGG
SIMAKWCLHHHRESFLYEHFEEICDICRAYDVSFSLGDGLRPGSIADANDAAQFAELE
TLGELTRIAWAKDCQVMIEGPGHVPMHKIKENMDKQLAVCGEAPFYTLGPLTTDIAPG
YDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPDRNDVKVGVITYKIAAHAADLAKGH
PAARIRDDALSRARFEFRWEDQFNLSLDPETARNFHDETLPKEAHKVAHFCSMCGPKF
CSMRISHDIRAEAQKEGLEAMAAKYRDGGDLYMPLPGAAEPAGE"
misc_feature complement(290808..292589)
/gene="thiC"
/locus_tag="NGR_b02930"
/note="thiamine biosynthesis protein ThiC; Provisional;
Region: PRK09284"
/db_xref="CDD:181756"
misc_feature complement(292347..292565)
/gene="thiC"
/locus_tag="NGR_b02930"
/note="ThiC-associated domain; Region: ThiC-associated;
pfam13667"
/db_xref="CDD:205844"
misc_feature complement(290883..292226)
/gene="thiC"
/locus_tag="NGR_b02930"
/note="ThiC family; Region: ThiC; pfam01964"
/db_xref="CDD:202065"
misc_binding 292708..292819
/note="NGR_b02940; TPP Riboswitch, TPP, RF00059"
/bound_moiety="TPP"
gene 293042..293230
/locus_tag="NGR_b02950"
/db_xref="GeneID:7789831"
CDS 293042..293230
/locus_tag="NGR_b02950"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822512.1"
/db_xref="GI:227818541"
/db_xref="GeneID:7789831"
/translation="MAYSYRCKDYPGMETCPASFTAETEAELWKHIELHGETAHQEEP
NKWSSEDRQQIKNLVHET"
gene 293269..293877
/locus_tag="NGR_b02960"
/db_xref="GeneID:7789832"
CDS 293269..293877
/locus_tag="NGR_b02960"
/codon_start=1
/transl_table=11
/product="methyltransferase"
/protein_id="YP_002822513.1"
/db_xref="GI:227818542"
/db_xref="GeneID:7789832"
/translation="MGIYSDVILPKLCDLSMRNERLHPYRERVVGAAEGRVLEIGSGS
GLNLPFYRSVREILALEPDPALLAMARRVPHSEMPVNFIEASAEAIPLEDKSIDTVVT
TWTLCTIPRAATALAEMRRVLRPQGKLLFVEHGLSPDGGVRWWQNRLTPVWRRIGGGC
HLNRPIRSMIEDGGFRIDRIETGYMRGPKPTTFMYEGGATPN"
misc_feature 293374..293664
/locus_tag="NGR_b02960"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(293386..293406,293449..293454,293521..293529,
293575..293577)
/locus_tag="NGR_b02960"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(293951..295180)
/locus_tag="NGR_b02970"
/db_xref="GeneID:7789833"
CDS complement(293951..295180)
/locus_tag="NGR_b02970"
/codon_start=1
/transl_table=11
/product="MFS permease"
/protein_id="YP_002822514.1"
/db_xref="GI:227818543"
/db_xref="GeneID:7789833"
/translation="MISSVKSKGGCDDQSRHASSGLLARERPGTVQTASVMVMTVGGL
AGSKIAPSPALTTMPIAAMFLGTAIATLPASMWMSRVGRRPGFVLGALLGVAGGATAA
LGVWVADLLLLSFGTMLVGVYQAFAQFYRFAASEVATEAFRPRAISLVLGGGIVAAFA
GPMIGRFGGPLLGPEYLGSFLLLSLVSLLSAGILLGLRIPAATAANSIVEGRDWKAIV
SQPAYLVALFGAATGYGIMILAMTATPIAMVHHRHDLSTAASVIQLHVLGMFLPSFFT
GSLIARFGVLQIMFIGVLILSGHVLMTLTGTGFGSFAAALVLLGVGWNFLYIGGTALL
TTTYTQEEKGRAQAINDMTIFAVGLACSFGTGALLQRLGWQMLNLALLPWLAVAAAAL
AWLGYRRRRGLEPAHAA"
misc_feature complement(294101..295027)
/locus_tag="NGR_b02970"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature complement(<294053..294514)
/locus_tag="NGR_b02970"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(294107..294109,294125..294130,
294137..294142,294176..294178,294185..294190,
294197..294202,294209..294214,294350..294355,
294359..294364,294374..294376,294383..294388,
294395..294397,294449..294454,294458..294466,
294473..294475))
/locus_tag="NGR_b02970"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 295225..295893
/locus_tag="NGR_b02980"
/db_xref="GeneID:7789834"
CDS 295225..295893
/locus_tag="NGR_b02980"
/codon_start=1
/transl_table=11
/product="ArsR family transcriptional regulator"
/protein_id="YP_002822515.1"
/db_xref="GI:227818544"
/db_xref="GeneID:7789834"
/translation="MSSPKVQIYEQLAELAKMLGSAHRLELIEYVSQGERSVERLAEL
TGLTVANTSQHLQLLRRGGYVRSRRDGKRVLYRLGDGPILELLASLHCYAERNSAEVR
EIVGDYFGKLDHLEPVTREELLGRLDDEDVTLLDVRPEDEFNLGHLPGALNVPLGELE
RHLAELPRDHEIVAYCRGPYCVLSFEAVAALRAKGYHVRRLKDGFPEWKAAGYAVEVA
SSGM"
misc_feature 295270..295485
/locus_tag="NGR_b02980"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature order(295270..295275,295279..295281,295288..295290,
295297..295302,295309..295314,295321..295323,
295411..295413,295471..295476,295480..295485)
/locus_tag="NGR_b02980"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:28974"
misc_feature order(295273..295278,295288..295296,295333..295341,
295366..295377,295381..295386,295393..295398,
295402..295407,295423..295431,295444..295452)
/locus_tag="NGR_b02980"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(295333..295335,295342..295344,295471..295473)
/locus_tag="NGR_b02980"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
misc_feature 295588..295851
/locus_tag="NGR_b02980"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cd00158"
/db_xref="CDD:29073"
misc_feature 295750..295752
/locus_tag="NGR_b02980"
/note="active site residue [active]"
/db_xref="CDD:29073"
gene 295896..297155
/locus_tag="NGR_b02990"
/db_xref="GeneID:7789835"
CDS 295896..297155
/locus_tag="NGR_b02990"
/codon_start=1
/transl_table=11
/product="major facilitator family transporter"
/protein_id="YP_002822516.1"
/db_xref="GI:227818545"
/db_xref="GeneID:7789835"
/translation="MAGESAAEPPSSIRLGLRENWSQFALLVLINAFVGGMVGIERTV
VPLIGSEEFHLASTTLVVSFIASFGVVKAFANLVSGQMADVWGRKRVLVLGWLFGLPV
PFMVIWAPSWAWVIAANALLGINQGLAWSMTVIMKVDLVGPKSRGLAVGLNEFAGYLA
VGLTAFITGYLASEYGLRPMPIYIGIAYALFGTVLSILLVRDSRDHVRLEASARPEQS
PSIGFREVFAMTSFKDRNLFAASQAGLVNNLNDGMSWGIFPLFFASFGLGVERIGILK
AVYPATWGILQIATGPLSDRWGRKGLIVSGMWVQSFGLFLTALTRSFEWWLVASLFIG
LGTAMVYPTLIAAVSDAAHPTWRARALSVYRFWRDLGYAIGAVSAGLIADRFGLAWAV
ASVAALTFVSGSIVAFAMQERPSSEPK"
misc_feature 295965..297119
/locus_tag="NGR_b02990"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 295974..297023
/locus_tag="NGR_b02990"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature order(296007..296009,296016..296024,296028..296033,
296088..296090,296097..296102,296109..296111,
296121..296126,296130..296135,296271..296276,
296283..296288,296295..296300,296307..296309,
296343..296348,296355..296360,296376..296378,
296634..296636,296643..296648,296655..296660,
296667..296669,296709..296711,296721..296723,
296733..296735,296742..296744,296754..296756,
296895..296897,296904..296909,296916..296918,
296928..296933,296940..296942,296973..296978,
296985..296990,296997..297002,297009..297011)
/locus_tag="NGR_b02990"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(297452..298192)
/locus_tag="NGR_b03000"
/db_xref="GeneID:7789836"
CDS complement(297452..298192)
/locus_tag="NGR_b03000"
/codon_start=1
/transl_table=11
/product="short-chain type dehydrogenase/reductase y4eK"
/protein_id="YP_002822517.1"
/db_xref="GI:227818546"
/db_xref="GeneID:7789836"
/translation="MSDAYRTALVTGVTSGIGRATVFKLCAMGLTVLAVGRNEEALAA
LSTECGALPIKADVRDTRVIAEEIGDREIDILVNNAGILSTRASFQEIDPDEIDAMID
INLKAPMHLTRLVLPGMVARRRGHLIYLGSSGGLAPFPSMGAYGPSKAGLSLFCDNLR
CDLLGTSIRVSEIVPGRVQTDLYRTALGAEQARSALYDGYRPIQPEHIASLIGTVIDL
PAFVDVARIEVFPTDQATGGGLMVKFDG"
misc_feature complement(297488..298180)
/locus_tag="NGR_b03000"
/note="Short-chain alcohol dehydrogenase of unknown
specificity [General function prediction only]; Region:
COG4221"
/db_xref="CDD:33946"
misc_feature complement(297479..298174)
/locus_tag="NGR_b03000"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(order(297659..297670,297746..297748,
297758..297760,297797..297805,297950..297958,
298079..298087,298142..298144,298148..298153,
298157..298159))
/locus_tag="NGR_b03000"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(297746..297748,297758..297760,
297797..297799,297881..297883))
/locus_tag="NGR_b03000"
/note="active site"
/db_xref="CDD:187535"
gene complement(298185..298934)
/locus_tag="NGR_b03010"
/db_xref="GeneID:7789837"
CDS complement(298185..298934)
/locus_tag="NGR_b03010"
/codon_start=1
/transl_table=11
/product="short-chain type dehydrogenase/reductase y4eL"
/protein_id="YP_002822518.1"
/db_xref="GI:227818547"
/db_xref="GeneID:7789837"
/translation="MKGQTAVIVGGASGLGLTTAKLMVERSAAKIGLIDKNEERLAEA
ARILADLGAEVAIASGDISVRESAHAAFEDLAGRLGRIHALVNSAAIYPRKAIFEITD
AEWDLENAINIKGTYHMMVAAVLHMRRFVNAPDVTGRIVNVTSVDAFKAHPQNAHYAA
TKAAVVSLTKSFAQECAKDQILVNSVAPAGFATDRAKELGFLPELAKASALGRAAEPV
EMAEWIVMMASSRNTYATGENVVISGGYIYV"
misc_feature complement(298200..298934)
/locus_tag="NGR_b03010"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(298209..298919)
/locus_tag="NGR_b03010"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(298353..298358,298362..298373,
298449..298451,298461..298463,298500..298508,
298602..298604,298665..298673,298749..298757,
298824..298832,298890..298901,298905..298907))
/locus_tag="NGR_b03010"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(298449..298451,298461..298463,
298500..298502,298599..298601))
/locus_tag="NGR_b03010"
/note="active site"
/db_xref="CDD:212491"
gene 299025..302093
/locus_tag="NGR_b03020"
/db_xref="GeneID:7789838"
CDS 299025..302093
/locus_tag="NGR_b03020"
/codon_start=1
/transl_table=11
/product="FAD linked oxidase-like protein"
/protein_id="YP_002822519.1"
/db_xref="GI:227818548"
/db_xref="GeneID:7789838"
/translation="MIPALAARPKMGRQYTDYLDALRQANFAGDMEASAGSTTVFATD
NSIYQLRPQAVLFPRGRADLVLIARLASEPRFRGVCFAVRGGGTGTNGQSLTDGIVID
MSRHMNRILSIDPAGRTAVVEAGVVKDQLNKALKPYGLFFAPELSTSNRATIGGMINT
DACGQGSCIYGKTSNHVLALNAVLMDGTEWLSRPLAPEALKDVLERPDRVGEIHRLAD
AIERENRDLIGATFPKLNRFLTGYDLAHLRTEDGGLNLNAVLCGAEGTLAMIAEAELN
LLPIPRFAALINIRYDDFDMALRDARFLVELKVASVETIDAKVLSLARSDIVWEEVGQ
FFADNRAGDVAGINIVEVLADDEEGLQAKLDQVTSALSADGRPGRRGFTLAPDKRDVE
AIWAMRKRAVGLLGNVEGPRRPVAFVEDTAVPPEHLADYIGEFRALLDAEGLDYGMFG
HVDAGVLHVRPALDLTDERQEPLVRRVSDAVAKLTRKYGGVFWGEHGKGVRSEYAPDF
FGPLYPELQRLKAAFDPHNQLNPGKIATPGHGALTRIDELPLRGALDRRIDPETRQAF
DNAAYCNGNGACFDFNTDSAMCPSFKGTGDRRFSPKGRASLIREWLRLLAERGVDPKA
EAERLRRRPVWRGFLPRLIASLGRTTKGDFSDQVREAMDTCLACKACAGQCPVKVNVP
AFRSKFLELYYGRYLRPLKDPLIASIEHLLPVMAKVGGLYNLVAGSRPGQVLMGRVGL
TALPLLPSQSLPAELRRRGVALARPAELAALSASEKERSLILVQDCFTSYFEPALLLD
VIDLLLALGFRPFVAPLMANGKALHVHGYLGAFERVAERNARHLSRLAASGVPLVGLD
PSMTLCYRSEYPGALGAERTPTVLLPQEWLGARLDRLANRKFDRPETQYVLLPHCTER
TNAADSVRSWGAIFEAFGLKLTIEDAGCCGMAGTFGHERRNRALSETIYRLSWQQKFE
GAGPHRVLMATGYSCRSQVKLMGAPGLPHPLQLLKALVCSDADFHNSHDM"
misc_feature 299073..300635
/locus_tag="NGR_b03020"
/note="FAD/FMN-containing dehydrogenases [Energy
production and conversion]; Region: GlcD; COG0277"
/db_xref="CDD:30625"
misc_feature 299178..299588
/locus_tag="NGR_b03020"
/note="FAD binding domain; Region: FAD_binding_4;
pfam01565"
/db_xref="CDD:201863"
misc_feature 300708..302054
/locus_tag="NGR_b03020"
/note="Fe-S oxidoreductase [Energy production and
conversion]; Region: GlpC; COG0247"
/db_xref="CDD:30596"
gene 302090..302869
/locus_tag="NGR_b03030"
/db_xref="GeneID:7789839"
CDS 302090..302869
/locus_tag="NGR_b03030"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_002822520.1"
/db_xref="GI:227818549"
/db_xref="GeneID:7789839"
/translation="MICETIDPKDPKESGPDVSVITQRGNLAEIVVAQLASRIDSGLY
GPGDKLPSSAQLCEEFGVSRTVIREALTSLKVAGRVTARQGAGVFVTEKDAKTLNFEI
SRIDDIRSAMQIIELRLGVELQSVALAASRRTPEALAEIARAYDQLESLDTTDAEIEA
EADFDFHLAIAKATRNPHFPRFLEAVRGEISLDLVLKHRQSAGGYQAYLKKINKEHAA
ILAAITQGDVKGAKNALALHLEESLNRYRAMLDEPATVAEE"
misc_feature 302141..302854
/locus_tag="NGR_b03030"
/note="Transcriptional regulators [Transcription]; Region:
FadR; COG2186"
/db_xref="CDD:32369"
misc_feature 302168..302362
/locus_tag="NGR_b03030"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature order(302171..302173,302240..302242,302246..302251,
302273..302287,302291..302296,302303..302305,
302333..302338,302342..302353)
/locus_tag="NGR_b03030"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature 302426..302812
/locus_tag="NGR_b03030"
/note="This entry represents the C-terminal ligand binding
domain of many members of the GntR family; Region: FCD;
smart00895"
/db_xref="CDD:197963"
gene 303220..304131
/locus_tag="NGR_b03040"
/db_xref="GeneID:7789840"
CDS 303220..304131
/locus_tag="NGR_b03040"
/codon_start=1
/transl_table=11
/product="nucleotidyltransferase"
/protein_id="YP_002822521.1"
/db_xref="GI:227818550"
/db_xref="GeneID:7789840"
/translation="MKTSLEHLPEKKQRELARVVAIIHEEFADALEGSSSAFKKRGRI
LKIILFGSYARGSFVDEPHTMKGYRSDYDILVIVNSKRLAEREYWDKATDRLMWDKGV
STPVGLIVHGAREVNNFLADGQYFFVDILREGVVLYELDDRPLAEPRRLSPADAFRFA
KQYFDDRIPHARVFLKTAKFCVREHDLKEAAFLLHQAIEQLYAASLLVLTNYSPPSHN
LKFLRGLAEDRDQRLVEAWPRNQHRYIAWYNILNEAYVKARYSKHFEISEEALAWLLE
RTEHLHRLVETVCQERLAELKRAAGAT"
misc_feature 303292..303630
/locus_tag="NGR_b03040"
/note="Nucleotidyltransferase (NT) domain of
Staphylococcus aureus kanamycin nucleotidyltransferase,
and similar proteins; Region: NT_KNTase_like; cd05403"
/db_xref="CDD:143393"
misc_feature order(303367..303375,303382..303384,303427..303432,
303436..303438,303532..303534,303538..303540)
/locus_tag="NGR_b03040"
/note="active site"
/db_xref="CDD:143393"
misc_feature order(303367..303375,303382..303384,303427..303432,
303436..303438)
/locus_tag="NGR_b03040"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143393"
misc_feature order(303430..303432,303436..303438,303538..303540)
/locus_tag="NGR_b03040"
/note="metal binding triad [ion binding]; metal-binding
site"
/db_xref="CDD:143393"
misc_feature order(303532..303534,303538..303540)
/locus_tag="NGR_b03040"
/note="antibiotic binding site [chemical binding]; other
site"
/db_xref="CDD:143393"
misc_feature 303721..304083
/locus_tag="NGR_b03040"
/note="Higher Eukarytoes and Prokaryotes
Nucleotide-binding domain; Region: HEPN; smart00748"
/db_xref="CDD:128987"
gene complement(304254..305939)
/locus_tag="NGR_b03050"
/db_xref="GeneID:7789841"
CDS complement(304254..305939)
/locus_tag="NGR_b03050"
/codon_start=1
/transl_table=11
/product="thiamine pyrophosphate protein"
/protein_id="YP_002822522.1"
/db_xref="GI:227818551"
/db_xref="GeneID:7789841"
/translation="MTTGTKGRNGGQILIDALRIHGVERAFCVPGESYLAALDALHEA
KDDIELVVCRQEGGAAYMAEAYGKLTGKPGICFVTRGPGATNASVGVHTAFQDSTPTI
LFIGQVARDQVEREAFQEVDYRRMFGQMAKWVVQIDDAARIPELVSQAFHRAVNGRPG
PIVVALPEDMLIDCVDVADAPAYKTVEMHAGQAQLDELRSRLEQAERPIVIVGGAGWT
EDAVADIRSFSEAMRLPVAASFRCQDLFDNTHPNYAGDLGLAAGPKLIQRIKDSDLLI
VIGARLGEMTTGGYSLIDIPVPKQTLVHVHAGAEELGRVYHADLPINASAAAFARQAA
GLAPIAEPRWAEWTRGANADYRENLEHPAVPGPVQMGDIMAWLRDHLPADAILTTGAG
NYSAWAHRFYQYRTFRTQLGPTNGSMGYGVPAAIAAKLSAPERPVIAFAGDGCFLMNG
QELATAMQYDARVIVLVINNGMYGTIRMHQERHYPGRVSGTQLTNPDFAALARAYGLH
GETVETTEDFAPAFERAEQSGKPALIEVRIDPEALTPKMSLTQIRDQALAQGT"
misc_feature complement(304266..305939)
/locus_tag="NGR_b03050"
/note="thiamine pyrophosphate protein; Validated; Region:
PRK08199"
/db_xref="CDD:181285"
misc_feature complement(305436..305906)
/locus_tag="NGR_b03050"
/note="Pyrimidine (PYR) binding domain of POX and related
proteins; Region: TPP_PYR_POX_like; cd07035"
/db_xref="CDD:132918"
misc_feature complement(order(305649..305654,305661..305663,
305673..305675,305694..305696,305730..305738,
305742..305747,305754..305759,305766..305768,
305775..305795,305823..305825,305835..305837,
305847..305852,305865..305867))
/locus_tag="NGR_b03050"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132918"
misc_feature complement(order(305553..305555,305562..305564,
305664..305666,305673..305678,305682..305687,
305694..305696,305769..305771,305775..305786,
305790..305792,305823..305825,305835..305837,
305844..305852))
/locus_tag="NGR_b03050"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132918"
misc_feature complement(order(305682..305684,305694..305696,
305772..305774,305850..305852))
/locus_tag="NGR_b03050"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132918"
misc_feature complement(304974..305357)
/locus_tag="NGR_b03050"
/note="Thiamine pyrophosphate enzyme, central domain;
Region: TPP_enzyme_M; pfam00205"
/db_xref="CDD:201080"
misc_feature complement(304326..304826)
/locus_tag="NGR_b03050"
/note="Thiamine pyrophosphate (TPP) enzyme family,
TPP-binding module; found in many key metabolic enzymes
which use TPP (also known as thiamine diphosphate) as a
cofactor. These enzymes include, among others, the E1
components of the pyruvate, the acetoin and...; Region:
TPP_enzymes; cd00568"
/db_xref="CDD:48162"
misc_feature complement(order(304524..304526,304530..304532,
304605..304616,304686..304688))
/locus_tag="NGR_b03050"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:48162"
gene complement(305969..307162)
/locus_tag="NGR_b03060"
/db_xref="GeneID:7789842"
CDS complement(305969..307162)
/locus_tag="NGR_b03060"
/codon_start=1
/transl_table=11
/product="FAD dependent oxidoreductase"
/protein_id="YP_002822523.1"
/db_xref="GI:227818552"
/db_xref="GeneID:7789842"
/translation="MQASKTSYDVVIVGGAVVGSSAAYFLATNPDFTGSVLVIEKDWT
YQRCATALSSSSIRHQFSNAINVQVSQFGTEFIRDFKKHVAVDDDTPEIGFHEAGYLF
LAGDERGEQVLRRNHENQVACGAEVTLLDVEALGRRFPWLNLEGLVLGSTGERGEGWF
DSVGLMQGFRKKARSLGVEYVEDEVVAVNREDDRIVSVTTRSGQTIGCGTMVNTSGTN
GKKVARLAGLDIPVEPRRRSLFVVDCRTPLEGRVGLTIDPTGVFFRPEGKFYLMGTYP
KHDPEVDPNDFDVMHDEFDEEIWPILANRVPAFEALKVVNCWAGHYDYCTLDHNVILG
PHTEVRNFLFANGFSGHGLQQSPAMGRGLSELIAYGGFRTLDLSPFGYERVVANRPFL
EDAVI"
misc_feature complement(305996..307093)
/locus_tag="NGR_b03060"
/note="Glycine/D-amino acid oxidases (deaminating) [Amino
acid transport and metabolism]; Region: DadA; COG0665"
/db_xref="CDD:31009"
misc_feature complement(306011..306877)
/locus_tag="NGR_b03060"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene complement(307172..307984)
/locus_tag="NGR_b03070"
/db_xref="GeneID:7789843"
CDS complement(307172..307984)
/locus_tag="NGR_b03070"
/codon_start=1
/transl_table=11
/product="dTDP-glucose 4,6-dehydratase"
/protein_id="YP_002822524.1"
/db_xref="GI:227818553"
/db_xref="GeneID:7789843"
/translation="MSDYQRVLLTGAAGALGSELRKSGTRLGKVVRLSARGPCENLAP
HEEDFPLDLADFDAVSAAVKGCDAIVHMGGQALEGPWQTILDSNIVGGYNIYEAARRH
GVKRIVYASSVHAIGYYERTQTIDGNVPTRPDSLYGVSKTFVENLARYYFDKFGIETV
CLRIGSSFPEPTDRRHLITWLSYRDCRQLVEKSLSAPRVGFMIAYGMSNNSEAFWDNR
TAAVLGYKPEDSADDYRDKVFAKTTQGDPNDPAVRFQGGSFCAAGHFEDENK"
misc_feature complement(<307385..307969)
/locus_tag="NGR_b03070"
/note="Nucleoside-diphosphate-sugar epimerases [Cell
envelope biogenesis, outer membrane / Carbohydrate
transport and metabolism]; Region: WcaG; COG0451"
/db_xref="CDD:30800"
misc_feature complement(<307496..307969)
/locus_tag="NGR_b03070"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(order(307562..307564,307574..307576,
307649..307657,307763..307771,307886..307888,
307937..307939,307943..307948,307952..307954))
/locus_tag="NGR_b03070"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(307562..307564,307574..307576,
307649..307651,307721..307723))
/locus_tag="NGR_b03070"
/note="active site"
/db_xref="CDD:187535"
gene complement(307998..309200)
/gene="aatA1"
/locus_tag="NGR_b03080"
/db_xref="GeneID:7789844"
CDS complement(307998..309200)
/gene="aatA1"
/locus_tag="NGR_b03080"
/EC_number="2.6.1.1"
/note="Transaminase A; AspAT"
/codon_start=1
/transl_table=11
/product="Aspartate aminotransferase B"
/protein_id="YP_002822525.1"
/db_xref="GI:227818554"
/db_xref="GeneID:7789844"
/translation="MNFESRRAGSIKSSPSMAVSLAAKAMRAKGESVVDLSLGEPDFE
TPDFIVEAAIAAMRGGKTRYTGPDGTEELRAAIVAKFKRENRLDYAMDEISIGNGAKQ
ILFNAFLGTLEAGDEVIVPAPYWVSYTDIVILHGGVPRIIACGVEDDFKLTPERLEHA
ITPKTRWVLFNSPSNPTGAIYTSAELAALGEVLERHPHVLVMSDEIYEHIVADDVPFT
SFANACPQVRERTLIINGVSKAYAMTGWRLGYAAGPKSLTRVLNKMQSQSTTCPSSIS
QAAAAAALNGPQNFVAEAVAEYKARGELVTRGFSAIPGLEVRAPDGAFYLFPKCAGYI
GKTAPDGTVIENDTALASFLLTAGKVATVPGAAFGVEPYIRLSFATSRENLHIAIERI
GEALAKLR"
misc_feature complement(308001..309200)
/gene="aatA1"
/locus_tag="NGR_b03080"
/note="aspartate aminotransferase; Provisional; Region:
PRK05764"
/db_xref="CDD:180244"
misc_feature complement(308019..309101)
/gene="aatA1"
/locus_tag="NGR_b03080"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature complement(order(308460..308462,308484..308489,
308493..308495,308580..308582,308676..308678,
308826..308828,308898..308906))
/gene="aatA1"
/locus_tag="NGR_b03080"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature complement(order(308364..308366,308373..308375,
308460..308468,308601..308603,308796..308798,
308895..308897))
/gene="aatA1"
/locus_tag="NGR_b03080"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature complement(308484..308486)
/gene="aatA1"
/locus_tag="NGR_b03080"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene complement(309221..310873)
/locus_tag="NGR_b03090"
/db_xref="GeneID:7789845"
CDS complement(309221..310873)
/locus_tag="NGR_b03090"
/EC_number="3.5.2.14"
/codon_start=1
/transl_table=11
/product="N-methylhydantoinase B"
/protein_id="YP_002822526.1"
/db_xref="GI:227818555"
/db_xref="GeneID:7789845"
/translation="MSEPLIDIHMQVMWNRLISVVEEQAQTLIRTAFSTSVREAGDLS
AGIFDLEGRMLAQAVTGTPGHVNAMAESVAHFINDIGPENIFEGDVYITNDPWKGTGH
LHDITVVTPSFHHGKLVGYFASTAHVVDVGGRGFGPDAREVYEEGLFIPIMKFFDRGE
VNRTLIHIVRNNVRENDKVVGDFYALAACNETGHRRLVDMLTEFNLEDLGTIGSFILK
HSREATLERLRNLPHGSWSYSLDLDGYDEPVHLAAQLTISPDGVLVDFDGTSGMSRFG
INVPLVYAKAYACYGIKCVVAPEIPNNTASLAPFDVVAPEGCILNAKRPAPVAVRHVL
GHFVPDLVLGALHQALPGKVPAEGASALWNLHMSVRPVSDEIGGKGAEILMFNSGGTG
ARPSLDGLSATAFPSGVHTMPIEATENVGPIIVWRKELREGSGGAGEQRGGLGQVIEI
AAAEGYAFRFSAMFDRLGHPARGRDGGGDGAAGSVSLDDGTTFKGKGLQFVPAGRKLV
LHLPGGGGYGDAAKRPAAAIDADIANGYITKDQAAADYGRKK"
misc_feature complement(309233..310852)
/locus_tag="NGR_b03090"
/note="N-methylhydantoinase B/acetone carboxylase, alpha
subunit [Amino acid transport and metabolism / Secondary
metabolites biosynthesis, transport, and catabolism];
Region: HyuB; COG0146"
/db_xref="CDD:30495"
gene complement(310887..312968)
/locus_tag="NGR_b03100"
/db_xref="GeneID:7789846"
CDS complement(310887..312968)
/locus_tag="NGR_b03100"
/EC_number="3.5.2.14"
/codon_start=1
/transl_table=11
/product="N-methylhydantoinase A"
/protein_id="YP_002822527.1"
/db_xref="GI:227818556"
/db_xref="GeneID:7789846"
/translation="MTSASRNCRVGVDIGGTFTDIALDLDGTLHSTKVLTDYTAPERA
ILKGVKAVAETAGIALSDIDILIHGTTLATNALIERRGAKTAFVTTEGFRDVLEMRTE
NRFEQYDLNISLPPALIQRADRFTVRERMNAVGEVLQPLDAASVAAVVDQVAKGEYES
VAVGFIHAYANGAHEAAVRDALLKRLPQISVSVSSEVSPQMREFERFNTVCANAYVKP
AIKSYLDRLVVSLKEIGVGCPVYMIHSGGGIVSVESAAEFPVRLVESGPAGGAIFAAD
IARRHGLDTVLSFDMGGTTAKICLIENQVPKTAKTFEVARTYRFRKGSGMPISIPVVE
MVEIGAGGGSIASVDVMRQIRVGPHSAASEPGPACYQRGGLKPTVTDADLLLGKLDPD
NFAGGAIPLSVAASRDAMDREIGPGLGLDAEGAAYGTCEMVDENMANAGRVHTVENGK
DISDFTMITFGGAGPLHAARLCEKMGISTFLVPPGAGVGSAIGFLRAPFGYESVRSAV
FNLSRFDVDGANRLMAAMKSEALSFVAGGLDTADPVIERTVFMRYAGQGWDIPVALPF
EHFDAASAEQIRALFEGAYARFFGRAIEGLDIEIVSWAVKASSPLPEVARVEAVGRSR
EAEPGKRRRLFDVGQRSFLEAGIHEREMLVPGDVVSGPAVIAERETSTVLTSSFVATV
QVDGCLLVTRR"
misc_feature complement(310890..312947)
/locus_tag="NGR_b03100"
/note="N-methylhydantoinase A/acetone carboxylase, beta
subunit [Amino acid transport and metabolism / Secondary
metabolites biosynthesis, transport, and catabolism];
Region: HyuA; COG0145"
/db_xref="CDD:30494"
misc_feature complement(312411..312944)
/locus_tag="NGR_b03100"
/note="Hydantoinase/oxoprolinase N-terminal region;
Region: Hydant_A_N; pfam05378"
/db_xref="CDD:147519"
misc_feature complement(311478..312353)
/locus_tag="NGR_b03100"
/note="Hydantoinase/oxoprolinase; Region: Hydantoinase_A;
pfam01968"
/db_xref="CDD:202069"
gene complement(313279..314262)
/locus_tag="NGR_b03110"
/db_xref="GeneID:7789847"
CDS complement(313279..314262)
/locus_tag="NGR_b03110"
/codon_start=1
/transl_table=11
/product="exported ErfK/YbiS/YhnG family protein"
/protein_id="YP_002822528.1"
/db_xref="GI:227818557"
/db_xref="GeneID:7789847"
/translation="MVMKSVAIFAASLTLGLSGSVSAQELQPEAVNAASMASIPSERP
SKASPRPEPAIVRLQVLLDRAGASPGVIDGYYGENVTKAVAGFEAMQGLPVDGKPDPE
VTERLSGGKPVIEPYVISEDDAKGLVDSIPEDYAEQAEMEHLGYTSVEEKLSERFHMD
IDLLKALNPGSAFAVGATVSVAMPGTAKEGTVKRIEARRRAGQVLAFAEDGSVLAVYP
ATIGSEESPSPSGTHKVKGVARMPVYVYNPKVNFQQGDNSEVLELPKGPNGPVGSVWI
DLTEPTYGIHGTPEPSLVDKAGSHGCIRLTNWDAEELAAMVKPGVVVAFTD"
misc_feature complement(<313819..314235)
/locus_tag="NGR_b03110"
/note="Putative peptidoglycan-binding domain-containing
protein [Cell envelope biogenesis, outer membrane];
Region: COG3409"
/db_xref="CDD:33215"
misc_feature complement(313942..314112)
/locus_tag="NGR_b03110"
/note="Putative peptidoglycan binding domain; Region:
PG_binding_1; pfam01471"
/db_xref="CDD:201815"
misc_feature complement(313282..313923)
/locus_tag="NGR_b03110"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: ErfK; COG1376"
/db_xref="CDD:31566"
misc_feature complement(313294..313686)
/locus_tag="NGR_b03110"
/note="L,D-transpeptidase catalytic domain; Region: YkuD;
pfam03734"
/db_xref="CDD:202749"
gene complement(314374..315276)
/locus_tag="NGR_b03120"
/db_xref="GeneID:7789848"
CDS complement(314374..315276)
/locus_tag="NGR_b03120"
/codon_start=1
/transl_table=11
/product="amino acid ABC transporter substrate-binding
protein"
/protein_id="YP_002822529.1"
/db_xref="GI:227818558"
/db_xref="GeneID:7789848"
/translation="MRAPRSVVLSALACLVLPGVAFARCEGHVPQPKPQNTFPQDVGR
SFDRILEEGWIEFAVYEDFPPWSIEEKGEAHGVDVEIGKLVAAALGVEPRFRLVQAGE
TLDADLINYVWKGAVVGGHVSDVMLHVPYDSDYACRIEQVTFTGQYAREAIAIAYDKA
GYPDKGPTPSYFRFDTVAVENDSISDFHLTSLLGPVDKIRRYRSTALAVEALAGGETM
AAMGPRAQLQAGIAAHPVAALAVHEPPLVGMARGKWTLGVAVNFQHKDLAYAVDDALA
AALADGRIAAIFQAYGLTFEPPPR"
misc_feature complement(314518..315114)
/locus_tag="NGR_b03120"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cd00134"
/db_xref="CDD:29040"
misc_feature complement(order(314608..314610,314725..314727,
314863..314865,314977..314979,315088..315090))
/locus_tag="NGR_b03120"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29040"
misc_feature complement(order(314629..314631,314647..314649,
314659..314661))
/locus_tag="NGR_b03120"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:29040"
misc_feature complement(314533..314550)
/locus_tag="NGR_b03120"
/note="hinge residues; other site"
/db_xref="CDD:29040"
gene complement(315280..315966)
/locus_tag="NGR_b03130"
/db_xref="GeneID:7789849"
CDS complement(315280..315966)
/locus_tag="NGR_b03130"
/codon_start=1
/transl_table=11
/product="cytochrome c550"
/protein_id="YP_002822530.1"
/db_xref="GI:227818559"
/db_xref="GeneID:7789849"
/translation="MSTNRIRAGLAALALLGTATIVAAHGDVAPQPVNTDALPEVGEE
WLTENPYREEKVGRDTWLKAVEIGASGFNQNCARCHGLGAVSGGLAPDLRLLEAEEYG
DEWFIERFRLGYTQDGTTKMPAFGDILGQKAAWAIRTYIETRPEDGALDAHSDRLHEV
RNELASSKVSDPKALKAELEKIAAEVKTASGAPVADSVAYEAARVLTDTPESWKKASD
ILTVGLSASE"
misc_feature complement(315544..315777)
/locus_tag="NGR_b03130"
/note="Cytochrome C oxidase, cbb3-type, subunit III;
Region: Cytochrome_CBB3; pfam13442"
/db_xref="CDD:205620"
gene 316125..317312
/locus_tag="NGR_b03140"
/db_xref="GeneID:7789850"
CDS 316125..317312
/locus_tag="NGR_b03140"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822531.1"
/db_xref="GI:227818560"
/db_xref="GeneID:7789850"
/translation="MPKRRISWKISACLLVALAGSSGPARAEITVAMTYLRQEVQAPP
VLSNLDPIPADLGIAGAEVALADTETTGSFLGHHYTLKVISVAPGGDIAAAAKAALAA
SSVLLIDAPAESLLNVADLAEAGGALLFNVASGARALRDADCRANLLHTIPEDAMRAD
ALMQMLKARRWTRTAMIVGPRPEDAAYAATLRAAAEKFGVEILADKVWSFDTDLRRAA
GKEVPLFTQDLPDHDVLLVADEADDFARYVVDNTWLARPVAGSDGLRGEGWAPVLEQW
GAVQLQNRFEGAAKREMRTRDYAAWAALRSVGEAVTRTNSADPAELRAYILSDAFALD
GFKGRSLTYRRWNGQLRQPMPVVNARALVELTPIDGYLHQENDMDTLGLDRAESACKA
FGG"
misc_feature <316464..317069
/locus_tag="NGR_b03140"
/note="Periplasmic binding domain of ATP-binding cassette
transporter-like systems that belong to the type I
periplasmic binding fold protein superfamily; Region:
PBP1_ABC_transporter_LIVBP_like; cd06268"
/db_xref="CDD:107263"
misc_feature 316521..316526
/locus_tag="NGR_b03140"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107263"
gene 317314..318276
/locus_tag="NGR_b03150"
/db_xref="GeneID:7789851"
CDS 317314..318276
/locus_tag="NGR_b03150"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822532.1"
/db_xref="GI:227818561"
/db_xref="GeneID:7789851"
/translation="MRRICLFLAAVAAFPLAATAGEIWVTNEKDDNISVIDIATLEVI
RTIPTGERPRGITFNSDHSRAYICASDSDAVEVMDPATGEILHELPSGEDPEQFVLAP
DDKHLWIANEDDAVTTVVDVDRREVVAQINVGIEPEGMAVSADGKIVVATSETTNMAH
WIDTATMKIVANTLVDSRPRHAEFTSDGKELWVSSEIGGSVTVFDVATRSEKAKIRFA
ITGVNDDLVQPVGFKFTPDGKTAFVALGPANHLAVIDMKTFAVEGYILVGRRVWHMAF
SPNHSQLFTTNGVSGDVTVIDVAERQPLKSIKVGRFPWGAATRP"
misc_feature 317374..318273
/locus_tag="NGR_b03150"
/note="PQQ-dependent catabolism-associated beta-propeller
protein; Region: PQQ_ABC_repeats; TIGR03866"
/db_xref="CDD:188396"
misc_feature 317380..317490
/locus_tag="NGR_b03150"
/note="40-residue YVTN family beta-propeller repeat;
Region: beta_rpt_yvtn; TIGR02276"
/db_xref="CDD:211728"
misc_feature 318145..318264
/locus_tag="NGR_b03150"
/note="40-residue YVTN family beta-propeller repeat;
Region: beta_rpt_yvtn; TIGR02276"
/db_xref="CDD:211728"
gene 318304..318759
/locus_tag="NGR_b03160"
/db_xref="GeneID:7789852"
CDS 318304..318759
/locus_tag="NGR_b03160"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822533.1"
/db_xref="GI:227818562"
/db_xref="GeneID:7789852"
/translation="MRHRIVFAALLALALPNGVALADEESETPETGLAGLLSAPNRKE
LPKLTLAAGAALAAEPMRLKSGSYYKLTVEADGSQELALEGAGFFRAIWMNEIVVEGI
EIRPLGVASLEFDEAGEAEISFVAVVPGSYELKVPGTSGDLQKVAITIE"
gene 318770..319483
/locus_tag="NGR_b03170"
/db_xref="GeneID:7789853"
CDS 318770..319483
/locus_tag="NGR_b03170"
/note="ATP-binding cassette; transporter
nucleotide-binding domai"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_002822534.1"
/db_xref="GI:227818563"
/db_xref="GeneID:7789853"
/translation="MDGLAVEAITHDWGARRALDAVSFSVARGQFCALLGPNGAGKST
LYGLLTRLFTPRAGAIVIAGHDLARNPRAALARIGVVFQQPTIDLDLTVRRNLLYFAA
LHGLFGRQAEARVAAALERLGMADRAGEKAAALNGGHRRRMEIARALVHGPSVLLLDE
PTVGLDAAARAAIVDHVHRLAAEDGLTVLWATHLVDEVRPRDRLVVLHRGRVLAAGEA
GDIGGADLTGRFLALTGGA"
misc_feature 318779..319408
/locus_tag="NGR_b03170"
/note="ABC-type cobalt transport system, ATPase component
[Inorganic ion transport and metabolism]; Region: CbiO;
COG1122"
/db_xref="CDD:31319"
misc_feature 318785..319408
/locus_tag="NGR_b03170"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 318875..318898
/locus_tag="NGR_b03170"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(318884..318889,318893..318901,319016..319018,
319244..319249,319346..319348)
/locus_tag="NGR_b03170"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 319007..319018
/locus_tag="NGR_b03170"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature 319172..319201
/locus_tag="NGR_b03170"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 319232..319249
/locus_tag="NGR_b03170"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 319256..319267
/locus_tag="NGR_b03170"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 319334..319354
/locus_tag="NGR_b03170"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 319483..320376
/locus_tag="NGR_b03180"
/db_xref="GeneID:7789854"
CDS 319483..320376
/locus_tag="NGR_b03180"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822535.1"
/db_xref="GI:227818564"
/db_xref="GeneID:7789854"
/translation="MTHAEECNDLEPRRFDVVTVTRSRTLESSAADTLLNRALVALSS
ILCREALRFLGQRGRLLAALVRPLVWLIVFAAGFRAALGLSITPPYQTYITYEIYITP
GLVGMILLFNGMQSSLSLVYDREMGSMRLLLTAPLPRWWLLTCKLIAGSLISVIQAYV
FLAAAAAWGIRFTLTGYLCALPAIMLAALMVGALGLVLSSFIRQLENFAGVMNFVIFP
VFFLSTALYPLWRMAEASPLLRNICAVNPFTHAVELVRFALHAQVEPLALAVTVAALA
VFGAGALWGYDPARGLAARKV"
misc_feature 319597..320268
/locus_tag="NGR_b03180"
/note="ABC-2 type transporter; Region: ABC2_membrane;
cl11417"
/db_xref="CDD:213123"
misc_feature <319801..320250
/locus_tag="NGR_b03180"
/note="ABC-2 family transporter protein; Region:
ABC2_membrane_3; pfam12698"
/db_xref="CDD:205027"
gene complement(320466..320690)
/locus_tag="NGR_b03190"
/db_xref="GeneID:7789855"
CDS complement(320466..320690)
/locus_tag="NGR_b03190"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822536.1"
/db_xref="GI:227818565"
/db_xref="GeneID:7789855"
/translation="MVHIVISEIECRRGGLRFPSWLVLDEYNRVELDEAYDFSTTTPS
GAFSPAFVRKIAILIKQAATQRRLRAVVRK"
gene complement(320859..321110)
/locus_tag="NGR_b03200"
/db_xref="GeneID:7789856"
CDS complement(320859..321110)
/locus_tag="NGR_b03200"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822537.1"
/db_xref="GI:227818566"
/db_xref="GeneID:7789856"
/translation="MKQFTFSDMNRASGEILETALIEPVALTKRGKEKLVILSATDYH
KLVGRPRVEAYTLADAPDDVHEELIAGLDAIIAGDDDHG"
misc_feature complement(<320973..321110)
/locus_tag="NGR_b03200"
/note="Antitoxin Phd_YefM, type II toxin-antitoxin system;
Region: PhdYeFM_antitox; pfam02604"
/db_xref="CDD:202305"
gene complement(321261..321695)
/locus_tag="NGR_b03210"
/db_xref="GeneID:7789857"
CDS complement(321261..321695)
/locus_tag="NGR_b03210"
/codon_start=1
/transl_table=11
/product="Pseudoazurin"
/protein_id="YP_002822538.1"
/db_xref="GI:227818567"
/db_xref="GeneID:7789857"
/translation="MLRRMGIVAAMVLMAGAAIAAEHEVKMLNKGESGTMIFEPAFVK
AAAGDTIRFVPVDKGHNVESIKGMLPDGVDKFKSKVNEEYVMTPTVPGLYGVKCSPHF
AMGMVALIQVGEVPPNVEAVKAVKLPKKADERIKEALAASFR"
misc_feature complement(321273..321617)
/locus_tag="NGR_b03210"
/note="pseudoazurin; Region: pseudoazurin; TIGR02375"
/db_xref="CDD:131428"
gene complement(321858..324062)
/locus_tag="NGR_b03220"
/db_xref="GeneID:7789858"
CDS complement(321858..324062)
/locus_tag="NGR_b03220"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_002822539.1"
/db_xref="GI:227818568"
/db_xref="GeneID:7789858"
/translation="MTRISDWLIDPADNPERNTAKLLTIAEVLMRQVEQASGERGVAY
EQFQRAALLEDRVRQRTSDLESTLKILNETNARLAEANRATERARRNLADAIEAVEEG
FALFDASEILVMYNSRFCCDLEDVRATLRPGLSFADYIEACSRSRFLALPKGGGPADW
MATRMQRHRTRSVFQVALAGDRWLQVSEQPTSDGGTVVLQTDVTEIIRMERSERGRML
DDQARLIHATLEHINQGICIFDAAGRLVGWNERLRLLLDIPVTVLRTGTGFDTLQRWM
QRDGELLSSITPPELFSWAVQQTQRPPLFLEIRRTSGVMLVVFAEETPDRGFVMSFSD
VTRERLAIQAMQRANASLEARVAARTEDLRAALADAERANSTRARFVAAASHDLLQPL
SAAKLFVASARDETEDERAGGTLDKAHKALASVEAILGALLDISRLDEAVVEISPVRL
APLFAQLTDEFAPMAERKGLQLAILPCALTVFSDPAYLRRILQNLISNAIRYTRTGRV
LVGPRRLPGGVRIEVHDTGPGIAPEDQRAIFREFHRLNASASASEGLGLGLAIVERAC
ALLGHRLTLNSTPGRGTCFAIELEQAPARAVASYPCGEAIEDGATDDVGDRIALLVEN
DEELRHAISLVLERRGVTVLEVASGEEALELVDEMGIVPDLYLVDQQLGDGLTGIETL
TALKQRHGDRPARIITADRTPSVRDACAAAEIEIIYKPLDPEVLDAFVTRGG"
misc_feature complement(323430..323777)
/locus_tag="NGR_b03220"
/note="PAS fold; Region: PAS_7; pfam12860"
/db_xref="CDD:205113"
misc_feature complement(323034..323378)
/locus_tag="NGR_b03220"
/note="PAS fold; Region: PAS_7; pfam12860"
/db_xref="CDD:205113"
misc_feature complement(322269..>322943)
/locus_tag="NGR_b03220"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature complement(322752..322943)
/locus_tag="NGR_b03220"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(322767..322769,322779..322781,
322788..322790,322800..322802,322809..322811,
322821..322823,322869..322871,322878..322880,
322890..322892,322899..322901,322911..322913,
322923..322925))
/locus_tag="NGR_b03220"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(322905..322907)
/locus_tag="NGR_b03220"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(322296..322601)
/locus_tag="NGR_b03220"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(322308..322310,322314..322319,
322332..322334,322338..322340,322386..322397,
322473..322478,322482..322484,322488..322490,
322494..322496,322560..322562,322569..322571,
322581..322583))
/locus_tag="NGR_b03220"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(322569..322571)
/locus_tag="NGR_b03220"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(322389..322391,322395..322397,
322476..322478,322482..322484))
/locus_tag="NGR_b03220"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature complement(321885..322205)
/locus_tag="NGR_b03220"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(321885..322205)
/locus_tag="NGR_b03220"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(order(321903..321908,321915..321917,
321969..321971,322029..322031,322056..322058,
322191..322196))
/locus_tag="NGR_b03220"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(322056..322058)
/locus_tag="NGR_b03220"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(322029..322037,322044..322049))
/locus_tag="NGR_b03220"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(321900..321908)
/locus_tag="NGR_b03220"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(324059..325240)
/locus_tag="NGR_b03230"
/db_xref="GeneID:7789859"
CDS complement(324059..325240)
/locus_tag="NGR_b03230"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822540.1"
/db_xref="GI:227818569"
/db_xref="GeneID:7789859"
/translation="MRIFGGSGVVRDAIVPSASTAANDPNAAETLSRQLGPGPFSLIM
LFLSPAADLERLPAEAARVFVDVPIVGCTTAGEISGAGYDEGTVVALALPSEFFRVDT
VTIPDLMRLDPPALAAAVVRKRVAMARQYPELAHEFALLLVDGLSQKEDELTSALAAG
LGAMPMLGGSAGDGTRYARTFVLDGGRLSRNAAVLALVRTECPVRVFNFDHLMPTERR
MVVTEADPRRRVVRQINAEPAAHEYARLVGKDPQQLSPFTFAAHPVAVRMGTRHHVRA
IRQVMDNGDLVFFSAIDEGVVLTITEPADMVGQLKRELAGLCMPERPTAILAFDCILR
RLEAEEKQVIGRVSGLLRRHGVVGFSTYGEQFGPMHVNQTMTGVAIYPPGTVLPEKVP
E"
misc_feature complement(324101..325186)
/locus_tag="NGR_b03230"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG3287"
/db_xref="CDD:33097"
misc_feature complement(324527..325126)
/locus_tag="NGR_b03230"
/note="FIST N domain; Region: FIST; pfam08495"
/db_xref="CDD:149518"
misc_feature complement(324140..324526)
/locus_tag="NGR_b03230"
/note="FIST C domain; Region: FIST_C; pfam10442"
/db_xref="CDD:204491"
gene complement(325314..326036)
/locus_tag="NGR_b03240"
/db_xref="GeneID:7789860"
CDS complement(325314..326036)
/locus_tag="NGR_b03240"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_002822541.1"
/db_xref="GI:227818570"
/db_xref="GeneID:7789860"
/translation="MIIIRNSFQTPRTISPVQPLFKPVELRSALIVDDHPLFCDALAM
TLSGLVGIQSIESVGTLDAALARLDQDGPPDVVVLDLNLPDVNGLDGVVRLRQAAPQI
PIVVVSSLDELRVIRALLKAGINGFVPKHAARDEFRAAFAAIARGEIHAPQMALEPGS
PSLSDEAVARLGLLTRQQAKILQLVCAGLMNKQIAYELSIAETTVKAHVTAIMRKLGV
QTRMQAVLFAQEARFTALAPED"
misc_feature complement(325338..325949)
/locus_tag="NGR_b03240"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:32379"
misc_feature complement(325647..325949)
/locus_tag="NGR_b03240"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(325647..325649,325656..325658,
325713..325715,325776..325778,325800..325802,
325935..325940))
/locus_tag="NGR_b03240"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(325800..325802)
/locus_tag="NGR_b03240"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(325776..325784,325788..325793))
/locus_tag="NGR_b03240"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(325347..325517)
/locus_tag="NGR_b03240"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(325374..325376,325407..325421,
325425..325430,325434..325439,325461..325469,
325506..325514))
/locus_tag="NGR_b03240"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(325347..325352,325359..325361,
325368..325376,325467..325469,325473..325475,
325479..325481))
/locus_tag="NGR_b03240"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(326127..327893)
/locus_tag="NGR_b03250"
/db_xref="GeneID:7789861"
CDS complement(326127..327893)
/locus_tag="NGR_b03250"
/note="acceptor"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase"
/protein_id="YP_002822542.1"
/db_xref="GI:227818571"
/db_xref="GeneID:7789861"
/translation="MQRLMLTAVTLLSLAGLASAEVTEEDLAKDATTVGDVLTNGMGR
GLQRYSPLETLNKTNVKNLLPAWGFSLGGEKQRGQESQPIVYDGVMYITASYSRLYAI
DIKTGKELWQFDARLPEGILPCCDVINRGAAIYGDNIYFGTLDARLVALNRKTGDVVW
NKKIANYKEGYSYTAAPLIVNGLIITGNSGGEFGIVGEVQARDAKTGELVWTRPVIEG
HVGSYKGKDSSMTGTLNATWPGDLWKTGGGATWLGGSYDADTDTLVFGTGNPAPWNSH
LRNAGKPVEGNKGDNLYAASRLGINPENGEIKWHFQTTPREGWDFDGVNEVVPFISKD
GTKRFATADRNGFFYVLNREDGKFVAAYPFVKNITWAKGIDETGRPIYAEENRPGDPS
SAADGGKGQQVFSVPSFLGGKNWMPMAYSQKSELFYVPSNEWGMDIWNEPISYKKGAA
YLGAGFTIKPLFEDYIGSLKAIDPNSGEIKWEYKNAAPLWGGVMATAGGLVFVGTPEG
EFKALDDETGEELWSFQTGSGVVGQPITWEQDGEQYVSVISGWGGAVPLWGGEVAKKV
NYLNQGGMVWTFRLPKQLALAK"
misc_feature complement(326235..327842)
/locus_tag="NGR_b03250"
/note="PQQ-dependent dehydrogenase, methanol/ethanol
family; Region: PQQ_enz_alc_DH; TIGR03075"
/db_xref="CDD:211785"
misc_feature complement(326154..327815)
/locus_tag="NGR_b03250"
/note="Ethanol dehydrogenase, a bacterial quinoprotein
(PQQ-dependent type I alcohol dehydrogenase); Region:
PQQ_ADH_I; cd10277"
/db_xref="CDD:199835"
misc_feature complement(order(326166..326168,326178..326186,
326313..326324,327567..327569,327606..327608,
327663..327668,327678..327680,327684..327704,
327708..327713))
/locus_tag="NGR_b03250"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:199835"
misc_feature complement(order(326157..326159,326163..326165,
326328..326330,326337..326345,326352..326354,
326358..326360,326451..326453,326460..326468,
326475..326477,326481..326483,326814..326816,
326823..326831,326838..326840,326844..326846,
326967..326969,326976..326984,326991..326993,
326997..326999,327261..327263,327270..327278,
327285..327287,327291..327293,327414..327416,
327423..327431,327438..327440,327444..327446,
327561..327563,327570..327578,327585..327587,
327591..327593,327693..327695,327702..327710))
/locus_tag="NGR_b03250"
/note="Trp docking motif [polypeptide binding]; other
site"
/db_xref="CDD:199835"
misc_feature complement(order(326424..326426,326862..326864,
326934..326936,327087..327089,327141..327143,
327321..327326,327372..327374,327504..327506,
327519..327524,327654..327656))
/locus_tag="NGR_b03250"
/note="active site"
/db_xref="CDD:199835"
gene 328113..328475
/locus_tag="NGR_b03260"
/db_xref="GeneID:7789862"
CDS 328113..328475
/locus_tag="NGR_b03260"
/note="pyrroloquinoline quinonesynthesis protein A"
/codon_start=1
/transl_table=11
/product="coenzyme PQQ synthesis protein A"
/protein_id="YP_002822543.1"
/db_xref="GI:227818572"
/db_xref="GeneID:7789862"
/translation="MPAPTWLLPSARTTGFRSADQFDLNYDHRCEKARRQRRCRVLPV
RQKADPAPHPSGVPTNTACSVLDPAATAPARAGPGTKPPEANGENMSWHAPKFIDVSC
AMEITRYAPADGSEPVLF"
misc_feature 328380..328439
/locus_tag="NGR_b03260"
/note="PqqA family; Region: PqqA; pfam08042"
/db_xref="CDD:149237"
gene 328521..329432
/locus_tag="NGR_b03270"
/db_xref="GeneID:7789863"
CDS 328521..329432
/locus_tag="NGR_b03270"
/note="possibly involved in transport of pyrroloquinoline
quinone transport"
/codon_start=1
/transl_table=11
/product="pyrroloquinoline quinone biosynthesis protein
PqqB"
/protein_id="YP_002822544.1"
/db_xref="GI:227818573"
/db_xref="GeneID:7789863"
/translation="MKNASDLRVVVLGAAAGGGLPQWNCGCRNCAAAREPGSSLRPQT
QSSLAVSLDGEAWAIFNASPDIRQQIQVNAALQPHRLRHSPIKAVVLTNGDIDHLAGL
LVLREKQPFTVFSTGAVAEVIADNPVFGVLDPGLVSKSVVAIEEPFSPLPGLEARLFA
VPGKVPLFLEDGDPELGLEGEQTVGLELRADGKRVYYIPGCGALSGSLVARLEGADAL
FFDGTLFSDDEMIAAGVGQKTGRRMGHMPIAGEDGSLKALGPLKIPRKIYVHINNTNP
IWQAGPERECAEAHGFEVGFDGMEVRP"
misc_feature 328581..329426
/locus_tag="NGR_b03270"
/note="pyrroloquinoline quinone biosynthesis protein PqqB;
Provisional; Region: PRK05184"
/db_xref="CDD:179958"
gene 329429..330196
/locus_tag="NGR_b03280"
/db_xref="GeneID:7789864"
CDS 329429..330196
/locus_tag="NGR_b03280"
/EC_number="1.3.3.11"
/note="Required in the synthesis of PPQ, but its exact
function is unknown"
/codon_start=1
/transl_table=11
/product="pyrroloquinoline quinone biosynthesis protein
PqqC"
/protein_id="YP_002822545.1"
/db_xref="GI:227818574"
/db_xref="GeneID:7789864"
/translation="MTIAADKQAFHARLLSIGSDRYHDKHPFHVMLHGGRCTMTQVRA
WVLNRYYYQTRIPMKDAAFLSRCDDPQMRRAWRSRIEDHDGGHDEGGGIRRWLRLAEA
VGLDADFVASTKGVLPATRFAVDAYVAFVRQQPLLEAVASSLTELFAPKIHSERIAGL
LEHYAFADDAALAYFRQRLVEAPQDVKFGLAYVLDHADTAEKQNAAVAALTFKTEVLW
SQLDALYGAYVAPGLIPPGGWDGREGVTAAAAAEAAE"
misc_feature 329429..330160
/locus_tag="NGR_b03280"
/note="pyrroloquinoline quinone biosynthesis protein PqqC;
Provisional; Region: PRK05157"
/db_xref="CDD:179947"
gene 330193..330486
/locus_tag="NGR_b03290"
/db_xref="GeneID:7789865"
CDS 330193..330486
/locus_tag="NGR_b03290"
/note="Pyrroloquinoline quinonebiosynthesis protein D"
/codon_start=1
/transl_table=11
/product="coenzyme PQQ synthesis protein D"
/protein_id="YP_002822546.1"
/db_xref="GI:227818575"
/db_xref="GeneID:7789865"
/translation="MTEAPAISSSSVVKLARGVRLRDDAVRGQLVLLAPERAMALDEI
AARIVQALDGERTLDRIAADFAAEFEAPAEEIANDITIFIQQLAARRMLEIAE"
misc_feature 330232..330474
/locus_tag="NGR_b03290"
/note="Coenzyme PQQ synthesis protein D (PqqD); Region:
PqqD; pfam05402"
/db_xref="CDD:147537"
gene 330483..331607
/locus_tag="NGR_b03300"
/db_xref="GeneID:7789866"
CDS 330483..331607
/locus_tag="NGR_b03300"
/note="Pyrroloquinoline quinonebiosynthesis protein E"
/codon_start=1
/transl_table=11
/product="pyrroloquinoline quinone biosynthesis protein
PqqE"
/protein_id="YP_002822547.1"
/db_xref="GI:227818576"
/db_xref="GeneID:7789866"
/translation="MSKPITVGSDAARHARPVPPPMAMLAELTHRCPLACPYCSNPID
LTHADGELSTGEWIGVFEQAAKLGVLHLHLSGGEPAARRDLAELTRAAASFGLYTNLI
TSGVGLTEARIGELADAGLDHVQLSLQGVSPEGADRISGYRGGYDRKMAVAGWVTAAT
IPLTVNAVCHRQNMDQIDAMIDLAIGLRARRIEIATVQFHGWAERNKAALLPTRVQVE
RATSTVAEARRKYEGVIEIDYVPADYHSNYPKACMGGWGRVGLNVTPSGRVLPCHAAE
TIPSLSFDNVRDGSLARIWYEGDAFNAYRGDTWMPELCRSCERKNVDFGGCRCQAMAL
AGDASAMDPVCVRSPLRGGLTEDTDRLLALSSAELVFRGR"
misc_feature 330501..331604
/locus_tag="NGR_b03300"
/note="pyrroloquinoline quinone biosynthesis protein PqqE;
Provisional; Region: PRK05301"
/db_xref="CDD:180002"
misc_feature 330561..331139
/locus_tag="NGR_b03300"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature order(330576..330578,330582..330584,330588..330590,
330594..330602,330705..330707,330711..330716,
330786..330794,330861..330863,330984..330986,
331077..331082)
/locus_tag="NGR_b03300"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
misc_feature 331263..331517
/locus_tag="NGR_b03300"
/note="radical SAM additional 4Fe4S-binding SPASM domain;
Region: rSAM_more_4Fe4S; TIGR04085"
/db_xref="CDD:188600"
gene 331872..332903
/locus_tag="NGR_b03310"
/db_xref="GeneID:7789867"
CDS 331872..332903
/locus_tag="NGR_b03310"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_002822548.1"
/db_xref="GI:227818577"
/db_xref="GeneID:7789867"
/translation="MPENSTAHASFQFRGSSFDSMIETLGGAFGTFDAEPISQARDFR
WGIDLSACDSAVLITGFHQTDFQFHIEPTADTTEYLSIVVPRSGGMGVTYGPRTAEAG
QGELLLYNNFEPNSVIMRGEENVVDELLINWSVVLQTLGQTFEAPFDGSLDLVPQVSL
ATPAGQLIGNLTETIMGGIRNDGPLLQSPIAMAHVTQALADVVVRLVPHRLSHLLDKK
PCLIAPRHVRRAIEFMQANISRPITMPMVAEAAGVSVRALETGFRAFRDTTPAAYLLR
LRLRAARQDLLDPDNNQPMRKICLKWGFFHFGRFSAVYRSTYGENPSDTRRRVGSSTA
PYVFSDAQR"
misc_feature 332610..332855
/locus_tag="NGR_b03310"
/note="Helix-turn-helix domain; Region: HTH_18; pfam12833"
/db_xref="CDD:205096"
gene 333174..334151
/locus_tag="NGR_b03320"
/db_xref="GeneID:7789868"
CDS 333174..334151
/locus_tag="NGR_b03320"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_002822549.1"
/db_xref="GI:227818578"
/db_xref="GeneID:7789868"
/translation="MALGDPANRPDWVTFEGSDPDRLAATLTSWTSNVVVRPLSRERI
SYKCAWANAGIVSIGSTHFDGQILFESEGAGGQLVLIVPRRGGVDLRMGRQAFCTSPG
RGAVIEGNQRIAARSLSSREHMFVAIDQAALYRRLCDVVEMPASGALEFSPEIDLLSG
PGTAIASIAATLRAGLDGEAPLRRSPLALTNLSEALIQVILDTLPHRFSEKMRRAASP
VPRHVKKAVEFMMANLSKPITLVEVAAVCGVSSRTLQQGFRQFKMTTPMSYLQDLRLK
ALREELTQARPGQSIADIAFKWGFTHMGRLATDYRNRFGELPSQTLRSC"
misc_feature 333882..334139
/locus_tag="NGR_b03320"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
gene 334236..334742
/locus_tag="NGR_b03330"
/db_xref="GeneID:7789869"
CDS 334236..334742
/locus_tag="NGR_b03330"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822550.1"
/db_xref="GI:227818579"
/db_xref="GeneID:7789869"
/translation="MREPETISFQPSEWVPNHPRLPVLVYRQALPSVERDVAAEFERR
FAEAGWQGLWRNGVFSYQHYHIGAHEVLGIARGIARLLIGGSEGAVLEVGPGDSLVLP
AGTGHMNLGASDGFLVVGGYPPGQTADIQTKAASRSALQTIADLPLPPADPLYGANGP
LTRLWHSA"
misc_feature 334239..334730
/locus_tag="NGR_b03330"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:212615"
gene 334952..335125
/locus_tag="NGR_b03340"
/db_xref="GeneID:7789870"
CDS 334952..335125
/locus_tag="NGR_b03340"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822551.1"
/db_xref="GI:227818580"
/db_xref="GeneID:7789870"
/translation="MTVTLDQAIAKMEATGDWEFDEDTLWSDKDIADYEAETGLLKGA
DLPGRTTRASPAA"
gene complement(335100..336164)
/locus_tag="NGR_b03350"
/db_xref="GeneID:7789871"
CDS complement(335100..336164)
/locus_tag="NGR_b03350"
/codon_start=1
/transl_table=11
/product="adenylate class-3/4/guanylyl cyclase"
/protein_id="YP_002822552.1"
/db_xref="GI:227818581"
/db_xref="GeneID:7789871"
/translation="MDLPTPLAWLVDEAGASPGPDRFLADLGGRLLADRLPLAGGALT
LAVPHPIIARRTWLWRAESGAVIESLGFAGGPPSQAERDWLAALGPVLEDRIGAAPDK
PVLAWAGTRGFDDDEAGRLRQAARFAAAPLAALSEKAALSALLEAYLGRRSAARVQAG
ALTRGTGETIRAALLYADLRNFTALSEATEPTEMIAALDAWFDRVAGAIHAFGGEVLK
FIGDGLLAIFPVTGWAPEACEAALRAVVAARAGMAHLDAVRQAQGLPPLPFGTALHLG
DVLWGNIGAVDRLDFTAIGPAVNLVSRLEGLCRPLGQSVLISGAVAAEASSPLVPLGE
HVLRGIQAPCPVFTLPATRA"
misc_feature complement(335115..335705)
/locus_tag="NGR_b03350"
/note="Adenylate cyclase, family 3 (some proteins contain
HAMP domain) [Signal transduction mechanisms]; Region:
CyaA; COG2114"
/db_xref="CDD:32297"
misc_feature complement(335118..335654)
/locus_tag="NGR_b03350"
/note="cyclase homology domain; Region: CHD; cd07302"
/db_xref="CDD:143636"
misc_feature complement(order(335151..335153,335256..335261,
335268..335273,335283..335291,335490..335492,
335499..335507,335511..335513,335616..335633,
335637..335639))
/locus_tag="NGR_b03350"
/note="nucleotidyl binding site; other site"
/db_xref="CDD:143636"
misc_feature complement(order(335499..335501,335631..335633))
/locus_tag="NGR_b03350"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143636"
misc_feature complement(order(335151..335153,335268..335270,
335277..335288,335319..335321,335328..335330,
335508..335513,335547..335549,335559..335561,
335568..335573,335580..335582,335616..335618))
/locus_tag="NGR_b03350"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143636"
gene 336402..336857
/locus_tag="NGR_b03360"
/db_xref="GeneID:7789872"
CDS 336402..336857
/locus_tag="NGR_b03360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822553.1"
/db_xref="GI:227818582"
/db_xref="GeneID:7789872"
/translation="MQESLVVRRETHIAAPPAAVFALLTDPEKILRWMGTEAEIEPQP
EGLYLVNVTGARFARGAFREVVPVHRLAYSFGWEGSEVVPPGSSLVEIDLIEQPDGTL
LRLTHTGLPSAEQCAGHAEGWAHYLDRLGEAAAGRDPGPDPWHGRTGSD"
misc_feature 336420..336809
/locus_tag="NGR_b03360"
/note="Putative hydrophobic ligand-binding SRPBCC domain
of Micromonospora echinospora CalC, human Aha1, and
related proteins; Region: SRPBCC_CalC_Aha1-like; cd07814"
/db_xref="CDD:176856"
misc_feature order(336420..336422,336426..336428,336432..336434,
336459..336467,336471..336476,336489..336491,
336513..336515,336537..336539,336543..336545,
336549..336551,336555..336557,336576..336581,
336585..336587,336594..336596,336612..336614,
336618..336623,336666..336671,336675..336677,
336681..336683,336711..336713,336717..336719,
336723..336725,336729..336731,336744..336770,
336774..336782,336789..336791)
/locus_tag="NGR_b03360"
/note="putative hydrophobic ligand binding site [chemical
binding]; other site"
/db_xref="CDD:176856"
gene complement(337138..338229)
/locus_tag="NGR_b03370"
/db_xref="GeneID:7789873"
CDS complement(337138..338229)
/locus_tag="NGR_b03370"
/note="3-hydroxybutyrate; depolymerase Lpq"
/codon_start=1
/transl_table=11
/product="LpqC, Poly"
/protein_id="YP_002822554.1"
/db_xref="GI:227818583"
/db_xref="GeneID:7789873"
/translation="MRTISDTLARTTRLKPGKAEPVHPRSRLLTLTDFGSNPGGLKAK
YYLPKSLAKKPALVVVLHGCTQIPADYDAGSGWSKMADEHGFALLYPQQLRDNNGNLC
FNWFLPDDFGREKGEALSIRQMIAAMVSRHKLASERIYVTGLSAGGAMANVVLATYPE
VFAGGAIIAGLPYATASTVSEAFDRMRGHGIPQARELRTILRAASGHTGPWPTLSVWH
GTNDGTVSEANARAIVEQWRGAHGLGSTPDVTETVDGQARNVWKGIDGRDRIALYSIR
DMGHGLPLDVASGYGKSGPYMLDVGISSTAHIAHSWGLTRKPARRRQNRSAAKPPSVR
VTPADRPFSLGEKIRTVIGYALRTTRLKP"
misc_feature complement(337465..338103)
/locus_tag="NGR_b03370"
/note="esterase, PHB depolymerase family; Region:
esterase_phb; TIGR01840"
/db_xref="CDD:162554"
misc_feature complement(337501..338061)
/locus_tag="NGR_b03370"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene 338610..338804
/locus_tag="NGR_b03380"
/db_xref="GeneID:7789874"
CDS 338610..338804
/locus_tag="NGR_b03380"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822555.1"
/db_xref="GI:227818584"
/db_xref="GeneID:7789874"
/translation="MRYRISAYPEREARSGIPVALMLALIAVLSAYLFVGDMLTEPRQ
QTRVYPPDAVTMVENAKKTP"
gene 339277..339747
/locus_tag="NGR_b03390"
/db_xref="GeneID:7789875"
CDS 339277..339747
/locus_tag="NGR_b03390"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822556.1"
/db_xref="GI:227818585"
/db_xref="GeneID:7789875"
/translation="MIFVRSNARTNGQKFVAVLCTVTISFVLASLPYKATLTDSALEL
SLQSAFAKNGGNGGNGNGGGGNGNGGGNGNGGGNGNGKGGSNSSSSSSSSTGAKAKGT
TVGTFGSILKIRHVEGISEEIRNGRYIMKDGRGRTIVNRRATSADQKRLLSLID"
gene complement(339737..340390)
/locus_tag="NGR_b03400"
/db_xref="GeneID:7789876"
CDS complement(339737..340390)
/locus_tag="NGR_b03400"
/codon_start=1
/transl_table=11
/product="CitB, response regulator containing a CheY-like
receiver domain and an HTH DNA-binding domain CitB"
/protein_id="YP_002822557.1"
/db_xref="GI:227818586"
/db_xref="GeneID:7789876"
/translation="MTAAIRVAVIDDHPLFREGVTRSLSEIDGFEIVAEGGSRDDALR
IAENLAPDVMLLDISMPGSGLEAVPLILQIAPSQKIVMLTVSEAGDDVKAALQGGAKG
YVLKGIGSRALADVIRSVASGESYVAPTLSAKLLSNSAPTPGSKFDGIGELTTREREV
LKLVASGMSNKQVARNLNLHEKTIKHHMTQIMAKLDVANRTEAAMVLRDALDRPLSQ"
misc_feature complement(339764..340378)
/locus_tag="NGR_b03400"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:32379"
misc_feature complement(340028..340366)
/locus_tag="NGR_b03400"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(340070..340075,340082..340084,
340139..340141,340199..340201,340220..340222,
340355..340360))
/locus_tag="NGR_b03400"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(340220..340222)
/locus_tag="NGR_b03400"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(340199..340204,340208..340213))
/locus_tag="NGR_b03400"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(340067..340075)
/locus_tag="NGR_b03400"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(339779..339934)
/locus_tag="NGR_b03400"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(339791..339793,339824..339838,
339842..339847,339851..339856,339878..339886,
339923..339931))
/locus_tag="NGR_b03400"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(339785..339793,339884..339886,
339890..339892,339896..339898))
/locus_tag="NGR_b03400"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(340387..341877)
/locus_tag="NGR_b03410"
/db_xref="GeneID:7789877"
CDS complement(340387..341877)
/locus_tag="NGR_b03410"
/codon_start=1
/transl_table=11
/product="sensor protein kinase"
/protein_id="YP_002822558.1"
/db_xref="GI:227818587"
/db_xref="GeneID:7789877"
/translation="MTHLPEAVVISASNQTMCRQRIERTGPRFVVRAKNLITRWNAQP
LAKQFLTAGGIVATVAMLVVGAFVTSLIEEAVTRNSAATTALYVDSVIAPLLPDMQTT
EVLDDTVSRALDETLGQGALGNRLLAFRLWRADGTILYANEEAMVGKRFELSPELQAA
FDGQVGAQFKPVDELDNETERAANKPLLEIYNPVLQPWSGQVVAVSEFHEIANDFELS
LHRARLMTWFAVAGFTLAFFIVLSAIVMRGGRTIEKQRLALKQRIDELSASLSQNETL
RGRLQQASQRTTALNEQMLRRIGADLHDGPAQLLAYASLRLDSDAVMNPLVPAEKRER
EVASIKASLDEAMHEIRTLCNGLVLPQIETASLPEILERCIHAHKQRTGSAVDLSLSR
PPDRLSPSAKICIYRFVQEALNNAYRHGGGVGQRVVQSIDGNRIRIEVADGGPGFDPN
KVTPTSLGLAGLRERIESLGGTFELNAAAPGTVVRMSLGIEEIAQI"
misc_feature complement(340408..341517)
/locus_tag="NGR_b03410"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG4585"
/db_xref="CDD:34223"
misc_feature complement(340807..340992)
/locus_tag="NGR_b03410"
/note="Histidine kinase; Region: HisKA_3; pfam07730"
/db_xref="CDD:203743"
misc_feature complement(340414..340665)
/locus_tag="NGR_b03410"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(340426..340428,340432..340437,
340450..340452,340453..340455,340501..340512,
340537..340542,340546..340548,340552..340554,
340558..340560,340624..340626,340633..340635,
340645..340647))
/locus_tag="NGR_b03410"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(340633..340635)
/locus_tag="NGR_b03410"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(340504..340506,340510..340512,
340540..340542,340546..340548))
/locus_tag="NGR_b03410"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 342058..343200
/locus_tag="NGR_b03420"
/db_xref="GeneID:7789878"
CDS 342058..343200
/locus_tag="NGR_b03420"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822559.1"
/db_xref="GI:227818588"
/db_xref="GeneID:7789878"
/translation="MAISRTIGRSVVALSIAVAPLAAVTFGATETAFAKSGNGGGNGG
GNGGGNGGGNGKGNGNGGSHGGGQSKSHSGSGKQGTTRAGKSNGDNLLKSLFSRGTKS
KKTIKAAKPAKTGNVAKIKTKSVDPETPGLRPAFSSLNRNYHAYLNSNDPRMAAIAAY
ALSYAEFEAENGTDAIPSDPALSDEALREALESFSKDGVVTDSDLLEAKEILGVGPAY
GKIDEIRGTLPDTSDVSDVSDTSDDGLDTSDDGLDTAEDTSEDIPDELPEVDGHRPGF
NSLNRNYHAYLNSNDPRMAGISDYAVAYAEFEAENGTDAVPTDPALSDEALREALESF
SKDGFVTDEDLLEAKAILGVGPTFGKIDEIRGTLPETTTDDLGVAE"
gene 343269..344078
/locus_tag="NGR_b03430"
/db_xref="GeneID:7789879"
CDS 343269..344078
/locus_tag="NGR_b03430"
/codon_start=1
/transl_table=11
/product="signal transduction protein"
/protein_id="YP_002822560.1"
/db_xref="GI:227818589"
/db_xref="GeneID:7789879"
/translation="MNLETRDDAIGGAVRAMQHGRIGFSLQKINAVDDPSTILYSECL
GRFVEPDGTVRTRGEFSAFPEASQVDLAFGPDLLGLAFEWLACHPSYVLGCDISAENM
ADERTCTVLYDLLSRHRALATRMVLEVTENLRPNGLSVAADLLKGARAIGYRIAIDKF
GTGNSRLSIPADAVKIDACFAQHRRGDAAPILRDMVALASCAATTVVVEGIETYDQLE
AARIAGATHVQGFLLSEPTLPPIYSRSVRAFRRRHRPVSPRSQPLQPSWPL"
misc_feature 343311..343976
/locus_tag="NGR_b03430"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene complement(344064..345191)
/locus_tag="NGR_b03440"
/db_xref="GeneID:7789880"
CDS complement(344064..345191)
/locus_tag="NGR_b03440"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002822561.1"
/db_xref="GI:227818590"
/db_xref="GeneID:7789880"
/translation="MERERLTSFHRTETVRPVAASAVSCEDDVIVASLQKCQATDRSS
PDMAEDARSALHSCIERYIEFVLSSAMPHPDLNLLVTLDVLLAEGSVARAARRLRLSP
SAMSRQLARLRETTGDPLLVRAGRGLVLTPRALELSERVGHLVEEAGAMLRPAEQLDL
RRLAGTFTLRASDGFVENFGPALIDSVGAEAPGVRLRFVPKLDKDSTPLRDGSVDLET
GVVGGSQGPEVRAQALFRDRFVGVVRVGHELCQGEVTPVRYAAGRHILVARHRLDKGP
IDDALEMLGLEREIAATVGGFSPALALARNSDMIATVPERHTGNLRAGLFSFTLPIPI
AEITVSMLWHPRLDADPAHRWLRECVRAMCVKPLASPLQRP"
misc_feature complement(344100..344870)
/locus_tag="NGR_b03440"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(344790..>344870)
/locus_tag="NGR_b03440"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(344100..344696)
/locus_tag="NGR_b03440"
/note="The C-terminal substrate binding domain of an
uncharacterized LysR-type transcriptional regulator
similar to DntR, which is involved in the catabolism of
dinitrotoluene; contains the type 2 periplasmic binding
fold; Region: PBP2_DntR_like_1; cd08460"
/db_xref="CDD:176149"
misc_feature complement(order(344175..344177,344370..344372,
344481..344483,344655..344657,344667..344672,
344676..344678))
/locus_tag="NGR_b03440"
/note="putative substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:176149"
misc_feature complement(order(344232..344234,344274..344276,
344283..344288,344295..344300,344307..344321,
344403..344405,344592..344594,344598..344612,
344616..344621,344628..344633,344637..344642,
344649..344654,344661..344666,344673..344675))
/locus_tag="NGR_b03440"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176149"
gene 345103..346560
/locus_tag="NGR_b03450"
/db_xref="GeneID:7789881"
CDS 345103..346560
/locus_tag="NGR_b03450"
/codon_start=1
/transl_table=11
/product="transmembrane efflux protein"
/protein_id="YP_002822562.1"
/db_xref="GI:227818591"
/db_xref="GeneID:7789881"
/translation="MTSSSQDTADAATGRTVSVRWKLVSLSLSMLLASLGTSIANVGL
PTLAETFSASFQQVQWVVLAYLLAVTTLIVSIGRLGDIVGRRRLLLAGIALFTLASAC
CGSAPHLVWLVAARAVQGLGAAVMLALAVALVSETVPKEKTGSAMGLLGTMSAIGTAL
GPSLGGALIAGFGWWAMFLVTVPVGLLVLFLAYHALPADRPASKAGRSGFDAIGTLVL
ALTLGAYALAMTIGHGAIGTTNLALMLAALLGIFLFLFVETRAASPLVELAMLRETPL
RSGLITSMLVATVMMTTLVVGPFYLSRGLGLDAALVGLVMSAGPVVSALAGVPAGRLV
DRFGVRHVSVAGLGAMATGCLALSVVPQLFGVAGYLLPLVILTAGYALFQAANTTGVM
KDALPEQRGIVSGLLNLSRNLGLITGASVMGAIFSLAAASEAVTASPAAAAAGMAATF
AVATALVVLAAAIAAASRAPAVRPTAPEAQQAGGG"
misc_feature 345217..>346299
/locus_tag="NGR_b03450"
/note="drug resistance transporter, EmrB/QacA subfamily;
Region: efflux_EmrB; TIGR00711"
/db_xref="CDD:129794"
misc_feature 345217..>345696
/locus_tag="NGR_b03450"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(346821..347729)
/locus_tag="NGR_b03460"
/db_xref="GeneID:7789882"
CDS complement(346821..347729)
/locus_tag="NGR_b03460"
/note="S-methylmethionine-dependent; MHT"
/codon_start=1
/transl_table=11
/product="MHT1, Homocysteine/selenocysteine methylase"
/protein_id="YP_002822563.1"
/db_xref="GI:227818592"
/db_xref="GeneID:7789882"
/translation="MNQIRILDGGMSRELSRLGAELRQPEWSALALMENPEIVGQVHR
EFIEAGADVITTNSYALVPFHIGEERFRSEGPSLTELAGKLAREAADGSADRKVLVAG
SLPPIFGSYEPERFDPSRVQDYLKVLVEGLAPYVDVWLGETLSLIAEGDAVRAAVAAT
GKPFWVSFTLADDAEALASDMPKLRSGESVAAAADWAAGSGAEALLFNCSRPEVMAGA
VAAAAATFRQRQANIGIGVYANAFEAEETDGAANETLHHTRADLTADRYSRFACDWVE
AGASIVGGCCGIGARHIHNLAYSLKG"
misc_feature complement(346827..347729)
/locus_tag="NGR_b03460"
/note="Homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Amino acid transport and
metabolism]; Region: MHT1; COG2040"
/db_xref="CDD:32223"
misc_feature complement(346824..347720)
/locus_tag="NGR_b03460"
/note="Methionine synthase I (cobalamin-dependent),
methyltransferase domain [Amino acid transport and
metabolism]; Region: MetH; cl14105"
/db_xref="CDD:213130"
gene complement(347844..349121)
/gene="metB"
/locus_tag="NGR_b03470"
/db_xref="GeneID:7789883"
CDS complement(347844..349121)
/gene="metB"
/locus_tag="NGR_b03470"
/EC_number="2.5.1.48"
/note="CGS; O-succinylhomoserine (Thiol)-lyase"
/codon_start=1
/transl_table=11
/product="cystathionine gamma-synthase"
/protein_id="YP_002822564.1"
/db_xref="GI:227818593"
/db_xref="GeneID:7789883"
/translation="MPSKLAGPLAKAESRSPTMARPHTAGHPSLAWETLALDGGLTID
PATKAIAPNISMSVNNLLVPGDGAFSADGVEDLTALPFLYARWTNPTVRQLELRMAAL
EGADDALATATGVAAIAATFLTCLKRGDHLIISDVCYAGANELARRMLPDYGIEVTAV
NMSRLDEVAAAFRPNTRLVHCESPCNPILRLTDLSAVAALAHRHGALVSVDSTLATPV
ATRPLALGVDLVIHSLTKFINGHGDALGGIVCGRKELVEKIRSRAGVYLGASLSAQNA
WLIMRGIDTLFPRLKAMSDSAMRIAHFLRDHPGVRSVTYPGLETHPQHALARRQMRIF
GGIVTFQTDDPQKIALRLAERLRVVHYAFSLGHQRSIVVLLDTKEMMNSTYGLEGPQL
DDYRAFAGDGVFRLSVGLESVDDIIADLDRALR"
misc_feature complement(347850..349025)
/gene="metB"
/locus_tag="NGR_b03470"
/note="Cys/Met metabolism PLP-dependent enzyme; Region:
Cys_Met_Meta_PP; pfam01053"
/db_xref="CDD:201574"
misc_feature complement(347847..348881)
/gene="metB"
/locus_tag="NGR_b03470"
/note="Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the...; Region: AAT_I;
cl00321"
/db_xref="CDD:213094"
misc_feature complement(order(348414..348416,348423..348425,
348480..348482,348489..348491,348576..348578,
348768..348770,348777..348782))
/gene="metB"
/locus_tag="NGR_b03470"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99742"
misc_feature complement(348414..348416)
/gene="metB"
/locus_tag="NGR_b03470"
/note="catalytic residue [active]"
/db_xref="CDD:99742"
gene complement(349263..349952)
/locus_tag="NGR_b03480"
/db_xref="GeneID:7789884"
CDS complement(349263..349952)
/locus_tag="NGR_b03480"
/codon_start=1
/transl_table=11
/product="ArtM, ABC-type arginine/histidine transport
system, permease component ArtM"
/protein_id="YP_002822565.1"
/db_xref="GI:227818594"
/db_xref="GeneID:7789884"
/translation="MDFSWIFSYWPLLAAGAVQTVLLLVISVGCGFILAIGLALAQVV
GPRWLKLFARGYCTCLRGTPLLIQLWLLYYGVGSLLPMIPGLRASFLWPILREGFFFA
AVSFTLNYAAYEAEVLRGALLAVPKGELEAGRSFGMSSSTLFRRIWLPRAIRIALPTI
AGEVVLQLKATPLAFTVTVMDLYAVAYKVRQDTLLVYEPLMVVTVFYVCLTLIITRAF
KIVEAQVPVRR"
misc_feature complement(349284..349928)
/locus_tag="NGR_b03480"
/note="ABC-type arginine transport system, permease
component [Amino acid transport and metabolism]; Region:
ArtQ; COG4215"
/db_xref="CDD:33942"
misc_feature complement(349308..349895)
/locus_tag="NGR_b03480"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(349308..349310,349317..349322,
349329..349334,349338..349343,349350..349355,
349383..349388,349425..349430,349437..349448,
349467..349469,349476..349481,349521..349523,
349572..349574,349581..349586,349596..349598,
349602..349607,349614..349616,349620..349622,
349626..349631,349734..349736,349740..349745,
349752..349781,349785..349796,349824..349826,
349839..349844,349851..349856))
/locus_tag="NGR_b03480"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(349431..349448,349734..349778))
/locus_tag="NGR_b03480"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(349353..349355,349383..349385,
349392..349394,349428..349430,349644..349646,
349734..349736))
/locus_tag="NGR_b03480"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(349500..349502,349512..349517,
349533..349571))
/locus_tag="NGR_b03480"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(349962..350684)
/locus_tag="NGR_b03490"
/db_xref="GeneID:7789885"
CDS complement(349962..350684)
/locus_tag="NGR_b03490"
/codon_start=1
/transl_table=11
/product="ArtQ, ABC-type arginine transport system,
permease component ArtQ"
/protein_id="YP_002822566.1"
/db_xref="GI:227818595"
/db_xref="GeneID:7789885"
/translation="MSSSQSLLELLSPYPPGWGGVLLAGALSTVLISLGAYLVGIAIG
LAGAIGKLKGNRPVRFVLDLYTTAIRAIPELILIIGLYYAGTDGLNRILAVLGLPAVE
INGFVAAVAVLGIVQGAYMTEVFRGAILAIPVGQIEAAAAFGMRPSLRFRRIVLPALM
PNALPGLANLWMCVTKDSALIAVVGYQELALATRIAAGNTKHYFLFFLASAALYLAIT
LISNVVFSALETRFRRGQPKTA"
misc_feature complement(349971..350648)
/locus_tag="NGR_b03490"
/note="ABC-type arginine transport system, permease
component [Amino acid transport and metabolism]; Region:
ArtQ; COG4215"
/db_xref="CDD:33942"
misc_feature complement(<350130..350522)
/locus_tag="NGR_b03490"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(350136..350141,350148..350159,
350178..350180,350187..350192,350232..350234,
350283..350285,350292..350297,350307..350309,
350313..350318,350325..350327,350331..350333,
350337..350342,350439..350441,350445..350450,
350457..350486,350490..350501))
/locus_tag="NGR_b03490"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(350142..350159,350439..350483))
/locus_tag="NGR_b03490"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(350139..350141,350355..350357,
350439..350441))
/locus_tag="NGR_b03490"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(350211..350213,350223..350228,
350244..350282))
/locus_tag="NGR_b03490"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(350761..351528)
/locus_tag="NGR_b03500"
/db_xref="GeneID:7789886"
CDS complement(350761..351528)
/locus_tag="NGR_b03500"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein"
/protein_id="YP_002822567.1"
/db_xref="GI:227818596"
/db_xref="GeneID:7789886"
/translation="MKLMSILMAGVALSLASAASAEVRFGVMNEAYPPFFTKDPSGKW
VGWEIELMDAVCAEMKETCSIVDMSWDGLIPGLEAKKFDVIWSSMSITDERKKTIDFT
DKYYNTPSKLIGAKDGKAGAAPDDVADKTIGIQVSTIQSEYYKKYFADKASEQSYATL
DEAFQDLAAGRIDYVFGDAIPLAEFLKSDFGKDCCEDKGNVKDDPAILGTGIGGGLRK
DDAALRDKLNAAIAAVRASGKYAEISKKYFDFDPYGE"
misc_feature complement(350785..351462)
/locus_tag="NGR_b03500"
/note="Bacterial extracellular solute-binding proteins,
family 3; Region: SBP_bac_3; pfam00497"
/db_xref="CDD:201266"
misc_feature complement(350785..351438)
/locus_tag="NGR_b03500"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cd00134"
/db_xref="CDD:29040"
misc_feature complement(order(350995..350997,351112..351114,
351244..351246,351319..351321,351433..351435))
/locus_tag="NGR_b03500"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29040"
misc_feature complement(order(351016..351018,351034..351036,
351046..351048))
/locus_tag="NGR_b03500"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:29040"
misc_feature complement(350890..350907)
/locus_tag="NGR_b03500"
/note="hinge residues; other site"
/db_xref="CDD:29040"
gene complement(351568..352344)
/locus_tag="NGR_b03510"
/db_xref="GeneID:7789887"
CDS complement(351568..352344)
/locus_tag="NGR_b03510"
/codon_start=1
/transl_table=11
/product="HisP, ABC-type histidine transport system,
ATPase component HisP"
/protein_id="YP_002822568.1"
/db_xref="GI:227818597"
/db_xref="GeneID:7789887"
/translation="MTRTAAALQVEDVHKRFGHHHVLKGVSLSAKKGDVISLIGSSGS
GKSTFLRCINFLEIADRGRFVINGEEIRMKPGREGRAHPANWRQIERIRTGLAMVFQS
FNLWAHMTVLENVTEAPIHVLGTSRKEATEQAEALLSKVGLYDKRHAYPAFLSGGQQQ
RASIARALCVDPGVMLFDEPTSALDPELVGEVLKVIRELAEEGRTMLIVTHEMKFARD
VSSRVMFLDQGRVEEEGPPAQVFGAPLSARCRAFTGSLSH"
misc_feature complement(351577..352335)
/locus_tag="NGR_b03510"
/note="ABC-type histidine transport system, ATPase
component [Amino acid transport and metabolism]; Region:
HisP; COG4598"
/db_xref="CDD:34233"
misc_feature complement(351652..352323)
/locus_tag="NGR_b03510"
/note="HisP and GlnQ are the ATP-binding components of the
bacterial periplasmic histidine and glutamine permeases,
repectively. Histidine permease is a multisubunit complex
containing the HisQ and HisM integral membrane subunits
and two copies of HisP. HisP...; Region:
ABC_HisP_GlnQ_permeases; cd03262"
/db_xref="CDD:73021"
misc_feature complement(352204..352227)
/locus_tag="NGR_b03510"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73021"
misc_feature complement(order(351712..351714,351808..351813,
352042..352044,352201..352209,352213..352218))
/locus_tag="NGR_b03510"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73021"
misc_feature complement(352042..352053)
/locus_tag="NGR_b03510"
/note="Q-loop/lid; other site"
/db_xref="CDD:73021"
misc_feature complement(351856..351885)
/locus_tag="NGR_b03510"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73021"
misc_feature complement(351808..351825)
/locus_tag="NGR_b03510"
/note="Walker B; other site"
/db_xref="CDD:73021"
misc_feature complement(351790..351801)
/locus_tag="NGR_b03510"
/note="D-loop; other site"
/db_xref="CDD:73021"
misc_feature complement(351706..351726)
/locus_tag="NGR_b03510"
/note="H-loop/switch region; other site"
/db_xref="CDD:73021"
gene 352955..353386
/locus_tag="NGR_b03520"
/db_xref="GeneID:7789888"
CDS 352955..353386
/locus_tag="NGR_b03520"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822569.1"
/db_xref="GI:227818598"
/db_xref="GeneID:7789888"
/translation="MEFCLLSPAQLIPTEEVNLDRVDALQTQILQAGSWTAPITVEKD
ELFVMDGHHRLTVAHRLRLAMVPVVLLDYDSVRVESWRPDENITPSEIFAMARSGRKF
PYKTTRHIFAQGLPRCDVPLELLSSPSPMDVAPVHSAGALS"
misc_feature 352967..>353176
/locus_tag="NGR_b03520"
/note="Stage 0 sporulation protein J (antagonist of Soj)
containing ParB-like nuclease domain [Transcription];
Region: Spo0J; COG1475"
/db_xref="CDD:31664"
misc_feature 352970..353215
/locus_tag="NGR_b03520"
/note="ParB-like nuclease domain; Region: ParBc;
pfam02195"
/db_xref="CDD:145381"
gene 353383..354756
/locus_tag="NGR_b03530"
/db_xref="GeneID:7789889"
CDS 353383..354756
/locus_tag="NGR_b03530"
/codon_start=1
/transl_table=11
/product="LysA, diaminopimelate decarboxylase LysA"
/protein_id="YP_002822570.1"
/db_xref="GI:227818599"
/db_xref="GeneID:7789889"
/translation="MTLHGHKIGFGLPPILRSATADLLTRHGPLLLDWVTCYGSPLNL
VWPDALQKNLAALKGVLTERRVGHAVYYGVKVNKSLGLMRAALSAGAGLDVSSLCELR
DARRLGAEGVRLVATGPAKTSAFHKELIDCSALISVDSPEELEDLIDGLPADAGPQPI
LLRLRPRDQSKSRFGMPGDAVVHCLARLTAENRLRFDGLHFHLSGYRWETRVAALSEA
ADLITKARRMGFSPRMIDIGGGLPIQYVDQVKYRAHLAAQAPEDYRTGKIPDSFYPYG
GTLSPADWLHRLLEAEMSQGQSVAGYLAREGLTLAMEPGRALTDQAAITVFRISRVKA
LGPDSHVIFVEGSSFSACETWFASEFLVDPILVPVTRPAAQSPPIRAYLAGHSCLDED
VISNRWLTFPIAPQAGDLLVYANTGGYQMDLLENEFHRHPMPARLCVIDDAEGRATLV
PDTIGEV"
misc_feature 353452..354699
/locus_tag="NGR_b03530"
/note="Diaminopimelate decarboxylase [Amino acid transport
and metabolism]; Region: LysA; COG0019"
/db_xref="CDD:30369"
misc_feature 353473..354699
/locus_tag="NGR_b03530"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme Y4yA; Region: PLPDE_III_Y4yA_like; cd06842"
/db_xref="CDD:143509"
misc_feature order(353500..353502,353605..353607,353668..353673,
353677..353682,353746..353748,353797..353799,
353806..353808,353818..353820,353896..353907,
354370..354381,354403..354405,354409..354411,
354415..354417,354424..354426,354535..354537,
354541..354549,354556..354558,354646..354654,
354664..354672)
/locus_tag="NGR_b03530"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143509"
misc_feature order(353599..353601,353605..353607,353662..353664,
353731..353733,353869..353871,353986..353988,
353995..353997,354097..354102,354319..354330,
354544..354549,354637..354639,354649..354651,
354664..354666)
/locus_tag="NGR_b03530"
/note="active site"
/db_xref="CDD:143509"
misc_feature order(353599..353601,353605..353607,353662..353664,
353731..353733,353869..353871,353986..353988,
353995..353997,354097..354102,354319..354330,
354544..354546,354637..354639)
/locus_tag="NGR_b03530"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143509"
misc_feature order(353605..353607,354544..354546)
/locus_tag="NGR_b03530"
/note="catalytic residues [active]"
/db_xref="CDD:143509"
misc_feature order(353995..353997,354328..354330,354544..354549,
354637..354639,354649..354651,354664..354666)
/locus_tag="NGR_b03530"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143509"
gene 354757..355767
/locus_tag="NGR_b03540"
/db_xref="GeneID:7789890"
CDS 354757..355767
/locus_tag="NGR_b03540"
/codon_start=1
/transl_table=11
/product="CysK, Cysteine synthase CysK"
/protein_id="YP_002822571.1"
/db_xref="GI:227818600"
/db_xref="GeneID:7789890"
/translation="MLHTTVTQLIGQTPVMSIDVPERDATLVLKIEKNNPGGSMKDRM
ARSMVVAALEDGRLAPGGTIVESSSGNTGTGLALAALEFGLRFIAVVDHHAAPDKIRM
MRALGAEIRYVEGDFAEDQVAVVERQRLAAQLGAQLPGAMFMNQSDNPANPDGYAGLV
DELIAQLPGGIDAFVGCVGTGGSMTGIAQRLKRHNPAVRTIAVEPAGSIVFGKPGHPY
YQSGTGTPAGDEVGKVLDYGCIDEGVQVTDVQAFETARYIARRKGLLVGGSTGGAIFK
ALEFIVEGKLTGTVVTTVADGGEKYLGTIFDDEWMAKRRLLEPAIAAQLDGWLAGRAR
AA"
misc_feature 354760..355662
/locus_tag="NGR_b03540"
/note="Cysteine synthase [Amino acid transport and
metabolism]; Region: CysK; COG0031"
/db_xref="CDD:30381"
misc_feature 354787..355662
/locus_tag="NGR_b03540"
/note="CBS_like: This subgroup includes Cystathionine
beta-synthase (CBS) and Cysteine synthase. CBS is a unique
heme-containing enzyme that catalyzes a pyridoxal
5'-phosphate (PLP)-dependent condensation of serine and
homocysteine to give cystathionine; Region: CBS_like;
cd01561"
/db_xref="CDD:107204"
misc_feature order(354799..354807,354838..354840,354856..354858,
354862..354864,354988..354990,354997..354999,
355045..355050,355057..355062,355069..355074,
355249..355254,355531..355539,355543..355551,
355621..355623,355651..355653,355660..355662)
/locus_tag="NGR_b03540"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:107204"
misc_feature order(354877..354879,354967..354969,355288..355305,
355420..355422,355561..355563,355639..355644)
/locus_tag="NGR_b03540"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:107204"
misc_feature 354877..354879
/locus_tag="NGR_b03540"
/note="catalytic residue [active]"
/db_xref="CDD:107204"
gene 355764..356903
/locus_tag="NGR_b03550"
/db_xref="GeneID:7789891"
CDS 355764..356903
/locus_tag="NGR_b03550"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822572.1"
/db_xref="GI:227818601"
/db_xref="GeneID:7789891"
/translation="MKVTICGAGRTGHLNAVLFKQRPGIEVSVLTSSTEVAEAWADGD
GLWYAQTPNDQLLSARPDHVGTDPGMALERADVVVITQPAQARPALLSQMAPHLPRDR
SVYVGAIPGFCGFDWLAAGALEGRDNVVVWGMKDVPHTAFDLVPGQRVRMGGGKAELF
AALHRRESAESAAALGAMLNRLYDAPVTMLDDYLEITLTPGNPLMHPAVLYALIGPGA
PFEDRPFAEPICWWSDCPLAGAELLEALDAENQAIRRASEARLGIDLSSVKPLRQELI
EAYGDQIGDDRTMYSLLRTNRAYAGIQAPLVPNPDGPGLVIDRESRTFHEDIAFGQAL
LVSIAARLGVAVPTISKTYNWARHYHGQLAGGAPDYVPTGWPEAQ"
misc_feature 355767..>356099
/locus_tag="NGR_b03550"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 356322..356846
/locus_tag="NGR_b03550"
/note="NAD/NADP octopine/nopaline dehydrogenase,
alpha-helical domain; Region: Octopine_DH; pfam02317"
/db_xref="CDD:202202"
gene 356900..358789
/locus_tag="NGR_b03560"
/db_xref="GeneID:7789892"
CDS 356900..358789
/locus_tag="NGR_b03560"
/codon_start=1
/transl_table=11
/product="siderophore biosynthesis protein"
/protein_id="YP_002822573.1"
/db_xref="GI:227818602"
/db_xref="GeneID:7789892"
/translation="MMDDRTSFAADPVSGDDLALLSNASRNAINRLVRCLFAERLLDP
DALLWARDGRQAWFPLWASRRVLHFTDLRLAPAGTLRNRGQIEVLDAANGRQRIDDPA
ALMREVAPSLTFTPAPDGIEHLLRDIDNSMSNDILARRARESWSATLRQQIAVAGARG
FLAYLEEALPTHLAAMTLDQWGALEGHPFYPTWKAKPGLAPKDVAALSPEFGARVPLR
IAALRSDWAYVEKMPQVGSYLEWFAANFPDLWYEWAEGLKARGKAPEDWLPLPIHGWH
LENFVRREFAAEIESGVLDPQGPEIVTLPAMSFRTMLPETEAPRPFIKLPVAIWMTSE
QRTLQGKSIHMGPRLSTLISDILSKEDDLRLGLEIFTEELGAILRHPETGDEHPGRFL
SVVYRNVDALARQDRMLPVTVAALLTAGPLDGRPLICELIARAGSESEATVTAFFRAY
ARTVVRPALAMYLLYGIAFEAHQQNSTVLFDDHGMPQKLLIRDFGDARSFTPLFKELG
YDLKPFSRKGILPTTFDDDISPVRSFVIDACFVCHLHEIALCLTGEYSLTGDSLWRIL
REETESAFEALRPRMQSDAFWIEEREAFLERPWPTRSVLRMHLERYRDYRVEHHLPNP
LASAQ"
misc_feature 357428..358159
/locus_tag="NGR_b03560"
/note="IucA / IucC family; Region: IucA_IucC; pfam04183"
/db_xref="CDD:202920"
misc_feature 358232..358750
/locus_tag="NGR_b03560"
/note="Ferric iron reductase FhuF-like transporter;
Region: FhuF; pfam06276"
/db_xref="CDD:191486"
gene 358786..360015
/locus_tag="NGR_b03570"
/db_xref="GeneID:7789893"
CDS 358786..360015
/locus_tag="NGR_b03570"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="YP_002822574.1"
/db_xref="GI:227818603"
/db_xref="GeneID:7789893"
/translation="MTGAVAVLRGFGPVFALLFALQFISMGAMEMSGPFWPIQIRALS
PSEGVFALAGIGVYVCPMLGVSLTSAFWGRMGDRFGNRLMMVRALAGLAVTQLLVAFA
QDVWTILALRFLQGACAGYIAPAQAYGVQVTGGRDRAALFAWLQVATNVGSLGGAFLG
GLILDALPFAAVNLTAGVICALCAGVAWASLPVPPQGTGGVGPAKATAASGAVSTGIS
VSGLLVLMGLLLTSRMVLQVPFALYMSEVYGAQHWIAGLSYGLLALGFVVGAPVWARI
FAWRAPAFVLGWSVLIVAGCLLVTGLAGSTRNIGLFAVLYLAWGALLGGTTPVLLSLV
SAATLSDRQGSILGLAQTCQQGASVVGIIAGVVATQRFGLEVAFPLVASLYGLSFLVA
LALWLKSRRSFDKGEIS"
misc_feature 358828..359973
/locus_tag="NGR_b03570"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 358837..359859
/locus_tag="NGR_b03570"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature order(358870..358872,358879..358887,358891..358896,
358957..358959,358966..358971,358978..358980,
358990..358995,358999..359004,359137..359142,
359149..359154,359161..359166,359173..359175,
359209..359214,359221..359226,359242..359244,
359473..359475,359482..359487,359494..359499,
359506..359508,359548..359550,359560..359562,
359572..359574,359581..359583,359593..359595,
359743..359745,359752..359757,359764..359766,
359776..359781,359788..359790,359821..359826,
359833..359838,359845..359850,359857..359859)
/locus_tag="NGR_b03570"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 360012..361178
/locus_tag="NGR_b03580"
/db_xref="GeneID:7789894"
CDS 360012..361178
/locus_tag="NGR_b03580"
/codon_start=1
/transl_table=11
/product="iron ABC transporter substrate-binding protein"
/protein_id="YP_002822575.1"
/db_xref="GI:227818604"
/db_xref="GeneID:7789894"
/translation="MRRIRSAFLAVGAMLALWMPAPAFAEEQAATEGQAPITVTDIAG
REVTVNAPVKRILLGEGRHLYLIASLDTEDPLSRVVAWRNDLIEADPATYAQYLQAFP
KLAKLPASPGQENGLIEIESTIVQKPDVVLLNLEAMRANEDAKYIEKLAELKIPVLYI
DFRHYPLKNTEPTIRLLGKIMGREARAEEIIEFRHKAMARVTDVLALAKPERPRVFVE
RIGGYADDCCLSFGAENFGKYVELAGGHNIGSDILPTTFGQLNPEQVIAANPEHVVVT
SADWEAYVPGGHWIPLGPGADPRVTRQKLEWFTSRSAYTDIAAEKTRNFHGIWHQFYN
SPYEFFAVQQLAKWFHPDLFADLDPDATFAEYHRRFLPIPYRPGYAISLADSTE"
misc_feature 360024..361160
/locus_tag="NGR_b03580"
/note="ferrichrome/ferrioxamine B periplasmic transporter;
Provisional; Region: PRK14048"
/db_xref="CDD:172540"
misc_feature 360120..361148
/locus_tag="NGR_b03580"
/note="Periplasmic binding protein TroA_f. These proteins
are predicted to function as initial receptors in the ABC
metal ion uptake in eubacteria and archaea. They belong
to the TroA superfamily of helical backbone metal receptor
proteins that share a...; Region: TroA_f; cd01139"
/db_xref="CDD:29742"
misc_feature order(360192..360197,360267..360269,360351..360353,
360408..360410,360414..360416,360627..360629,
360735..360737)
/locus_tag="NGR_b03580"
/note="putative ligand binding residues [chemical
binding]; other site"
/db_xref="CDD:29742"
gene complement(361479..363620)
/locus_tag="NGR_b03590"
/db_xref="GeneID:7789895"
CDS complement(361479..363620)
/locus_tag="NGR_b03590"
/codon_start=1
/transl_table=11
/product="TonB dependent/Ligand-Gated channel TonB"
/protein_id="YP_002822576.1"
/db_xref="GI:227818605"
/db_xref="GeneID:7789895"
/translation="MELRVGLLAVLLATVSRVALAQDATALERLEVRASNANATIGTA
VEDYAGGQVARGGRVGFLGNRDFMDTPFNITSYTAATIENQNAKTVADVLANDPSVRS
THASGGMLDSFYIRGFPLNEGNFGEVAFDGVYGVAPTYRLFTDYIERVEVLKGPTALL
YGISPNSSVGGTVNIVPKRASDVDLTRVTTDYASDLYGGGHLDVSRRFGDQRQFGVRF
NGSYHGGDTAIDNHSLDVAVGALALDYEGEDFRATLDVVGQRQDIDAPLRPFFPFGSF
EIPDAPAGRSNIQEPWEWARTDDLSWLGRVEYDVSDAVTVFAAVGGGNSRVERLFGTP
LLLNSAGDVSVTPQNFVFDVDRLTAEAGVRAEFETAAIDHSVTFQVSGLQQSLARGSN
SGTAQLTNIFDPLPRPEQDVPQPTHVPRVSENIFHGFALSDTMSMFDERVQLTLGGRW
QHIDTENYSPVTGDVSSSSDESALTPLAGIVVKPWENVAFYANYVEGLSVGDTAPTTA
VNSGETLAPYRSRQYEVGTKVDLGRVAVTVSAFQIEKPFGVLEARGSDLVFVEGGEQR
NRGVELNVFGEVTPEIRVLGGVTFIHGEITKTNDDATRGNTPIGVPSLQVNLGAEWDT
PFLTGLTLTGNVIHTDEQFVNTANTQEIPSWTRLDLGARYLTEISERPVTLRANVENV
FDLDYWSGVASFGTISQGAPLTVKVSMTTDF"
misc_feature complement(361482..363416)
/locus_tag="NGR_b03590"
/note="TonB-dependent siderophore receptor; Region:
TonB-siderophor; TIGR01783"
/db_xref="CDD:162535"
misc_feature complement(361482..363404)
/locus_tag="NGR_b03590"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(363090..363116,363159..363182,
363216..363239,363267..363284,363318..363347,
363375..363404))
/locus_tag="NGR_b03590"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(362565..362567,362640..362642))
/locus_tag="NGR_b03590"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene complement(364023..364784)
/locus_tag="NGR_b03600"
/db_xref="GeneID:7789896"
CDS complement(364023..364784)
/locus_tag="NGR_b03600"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase/reductase family
oxidoreductase"
/protein_id="YP_002822577.1"
/db_xref="GI:227818606"
/db_xref="GeneID:7789896"
/translation="MILKDRIAIVTGAGSGIGQAGAAIMAREGAHVVVVDRSAKAAVE
TVTSIAAKGGSAEALAIDVTNDEALAGGIADVAARHGRIDILHNHAGAQVAGDLEQVE
VAGFDRSWNLNVRAHFMAARFVMPAMKAAGRGVIVNTSSSSGVLYDREMIAYTTTKHA
VIAMTRQMAGDYAKYGVRVNALCPGWVDTPFNEPFINQMGGRSAIDAYIRKKVPLGRW
ASVDEIAESILFLVSDRSSYMTGQILVVDGGETVV"
misc_feature complement(364038..364784)
/locus_tag="NGR_b03600"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(364044..364763)
/locus_tag="NGR_b03600"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(364215..364220,364224..364235,
364311..364313,364323..364325,364362..364370,
364449..364451,364512..364520,364596..364604,
364671..364679,364734..364745,364749..364751))
/locus_tag="NGR_b03600"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(364311..364313,364323..364325,
364362..364364,364446..364448))
/locus_tag="NGR_b03600"
/note="active site"
/db_xref="CDD:212491"
gene complement(364789..365607)
/locus_tag="NGR_b03610"
/db_xref="GeneID:7789897"
CDS complement(364789..365607)
/locus_tag="NGR_b03610"
/codon_start=1
/transl_table=11
/product="PotC, ABC-type spermidine/putrescine transport
system, permease component II PotC"
/protein_id="YP_002822578.1"
/db_xref="GI:227818607"
/db_xref="GeneID:7789897"
/translation="MRALVSSVYLFLYAPIVLVVLFSFNAGRNASEFTGFSTAWYGKA
LGNTFLVSALQNSLMIAFTSAALAAVFGTMAALGMERLGIRTRAVFDALFAAAIVVPG
VVIGIATLVALVAVFSFVNPALATIWPGDHPPQLGLGYGSIIAAHGLFSMALVAMIVK
ARIASLGRDIVEASSDLYATPLTTFRLIVLPQILPSILAGFLLAFTFSFDDFIIAFFV
AGSKTTLPIYVFASIRRGVTPEINAIATLVLVASLLLILTARLLMREKKSKSGE"
misc_feature complement(364882..365607)
/locus_tag="NGR_b03610"
/note="ABC-type spermidine/putrescine transport system,
permease component II [Amino acid transport and
metabolism]; Region: PotC; COG1177"
/db_xref="CDD:31370"
misc_feature complement(364930..365448)
/locus_tag="NGR_b03610"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(364957..364962,364969..364980,
364999..365001,365008..365013,365053..365055,
365104..365106,365113..365118,365128..365130,
365134..365139,365146..365148,365152..365154,
365158..365163,365260..365262,365266..365271,
365278..365280,365299..365325,365329..365340,
365368..365370,365383..365388,365395..365400))
/locus_tag="NGR_b03610"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(364963..364980,365260..365280,
365299..365322))
/locus_tag="NGR_b03610"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(364960..364962,365179..365181,
365260..365262))
/locus_tag="NGR_b03610"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(365032..365034,365044..365049,
365065..365103))
/locus_tag="NGR_b03610"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(365607..366572)
/locus_tag="NGR_b03620"
/db_xref="GeneID:7789898"
CDS complement(365607..366572)
/locus_tag="NGR_b03620"
/codon_start=1
/transl_table=11
/product="PotB, ABC-type spermidine/putrescine transport
system, permease component I PotB"
/protein_id="YP_002822579.1"
/db_xref="GI:227818608"
/db_xref="GeneID:7789898"
/translation="MMGEGTGGCRECPSPCCRRRWGPGSRAFLTDHSMRKAMKTKRNL
VTAALVAPAAAWLTVFLVLPFIAMLVFAFGERAPEGGYQAAFTFAQFANLPTRAAAFW
NTLLLAPAGALLCLLVAYPVAYYLALKANPRFRLILVSLVVVPFWTSLLVRTYAWMYI
LGSRGIPHLLAMIGIEDVRLLNTPGAVLLGIVYGYLPLMIMPIYVSLEKLDRRLLEAS
ADLGAKPVSSFFGVTLPLSLPGVMTGVALVTILLLGEYLIPQLLGGGKVFFIGNALVD
LFLQSRNWPFGSAIAVTLVAVVVIVLMVAMRIAWKVAGTRQVDLV"
misc_feature complement(365709..366395)
/locus_tag="NGR_b03620"
/note="ABC-type spermidine/putrescine transport system,
permease component I [Amino acid transport and
metabolism]; Region: PotB; COG1176"
/db_xref="CDD:31369"
misc_feature complement(365739..366212)
/locus_tag="NGR_b03620"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(365748..365753,365790..365795,
365802..365813,365832..365834,365841..365846,
365886..365888,365937..365939,365946..365951,
365961..365963,365967..365972,365979..365981,
365985..365987,365991..365996,366099..366101,
366105..366110,366117..366146,366150..366161,
366192..366194,366207..366212))
/locus_tag="NGR_b03620"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(365796..365813,366099..366143))
/locus_tag="NGR_b03620"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(365748..365750,365757..365759,
365793..365795,366009..366011,366099..366101))
/locus_tag="NGR_b03620"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(365865..365867,365877..365882,
365898..365936))
/locus_tag="NGR_b03620"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(366621..367781)
/locus_tag="NGR_b03630"
/db_xref="GeneID:7789899"
CDS complement(366621..367781)
/locus_tag="NGR_b03630"
/codon_start=1
/transl_table=11
/product="PotD, Spermidine/putrescine-binding periplasmic
protein PotD"
/protein_id="YP_002822580.1"
/db_xref="GI:227818609"
/db_xref="GeneID:7789899"
/translation="MTKWYRKNAPITADKLADELMRLKRGSVTRRHFLGVTGLGLATA
VLARQPGIFNATAFAEDLGTQMSIATWPNYHDPATFEAFKAATGVAVEVNVFGSNEEM
LAKLQAGGTGWDLFVPTNYTISTYVKLGLIDELDMSKLPNYDASTENPRFTNEGIVDG
KTYALPKNWGTTGIALNSDKIKKPVTSWKDFFEVAMAEADGRAMVHDYQLTTIGNALV
SLGFSFNSIKPDELAKAEEVLIKVKPHLYAINSDYQPAMRATDAWMTMCWTNDGAQLN
RDMPEIKFVLGKDGGEIWSDFYAIPKSAANKAAGYALLNYLMAPENAVKEHIANGAPT
TDSRVLKLLPAEVTSNKIVYPDEAALTPLEFGAAVTLTDPGRAELMARFKAA"
misc_feature complement(366687..367697)
/locus_tag="NGR_b03630"
/note="Spermidine/putrescine-binding periplasmic protein
[Amino acid transport and metabolism]; Region: PotD;
COG0687"
/db_xref="CDD:31031"
misc_feature complement(366819..367442)
/locus_tag="NGR_b03630"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
gene complement(367833..368912)
/locus_tag="NGR_b03640"
/db_xref="GeneID:7789900"
CDS complement(367833..368912)
/locus_tag="NGR_b03640"
/codon_start=1
/transl_table=11
/product="PotA, ABC-type spermidine/putrescine transport
system, ATPase component PotA"
/protein_id="YP_002822581.1"
/db_xref="GI:227818610"
/db_xref="GeneID:7789900"
/translation="MTSASTNDIEFRSVTKRYGSVTAVSDINLTVPRGAFVALLGPSG
CGKTTCLRMIGGFEQPSEGAVYIGGDPMNGVPAYRRPVNMVFQQYALFPHLDVEQNVA
YGLKQMRPRIAPVEIARRTQEALELVRLGGYDKRRIHELSGGQQQRVALARAIVNKPK
VLLLDEPLAALDKKLRTAMQIELQSLQRELGITFVLVTHDQEEALSMSDLVCVMSTGR
IVQIGPPQEIYDRPASLFVADFVGKTNRIAATIEPDASAIRFANGVSLQKPSRANGTV
GPALVALRPEAISIVRAGDATLQGIVTHRIFLGSSVEYSVEVDGLGDFLVTADRRSLD
ESALAEPGERIGLVFDPNAMHVFPA"
misc_feature complement(367836..368903)
/locus_tag="NGR_b03640"
/note="ABC-type spermidine/putrescine transport systems,
ATPase components [Amino acid transport and metabolism];
Region: PotA; COG3842"
/db_xref="CDD:33633"
misc_feature complement(368187..368888)
/locus_tag="NGR_b03640"
/note="PotA is an ABC-type transporter and the ATPase
component of the spermidine/putrescine-preferential uptake
system consisting of PotA, -B, -C, and -D. PotA has two
domains with the N-terminal domain containing the ATPase
activity and the residues required...; Region: ABC_PotA_N;
cd03300"
/db_xref="CDD:73059"
misc_feature complement(368769..368792)
/locus_tag="NGR_b03640"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73059"
misc_feature complement(order(368316..368318,368415..368420,
368652..368654,368766..368774,368778..368783))
/locus_tag="NGR_b03640"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73059"
misc_feature complement(368652..368663)
/locus_tag="NGR_b03640"
/note="Q-loop/lid; other site"
/db_xref="CDD:73059"
misc_feature complement(368463..368492)
/locus_tag="NGR_b03640"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73059"
misc_feature complement(368415..368432)
/locus_tag="NGR_b03640"
/note="Walker B; other site"
/db_xref="CDD:73059"
misc_feature complement(368397..368408)
/locus_tag="NGR_b03640"
/note="D-loop; other site"
/db_xref="CDD:73059"
misc_feature complement(368310..368330)
/locus_tag="NGR_b03640"
/note="H-loop/switch region; other site"
/db_xref="CDD:73059"
misc_feature complement(367842..368072)
/locus_tag="NGR_b03640"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:203932"
gene 369086..369889
/locus_tag="NGR_b03650"
/db_xref="GeneID:7789901"
CDS 369086..369889
/locus_tag="NGR_b03650"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_002822582.1"
/db_xref="GI:227818611"
/db_xref="GeneID:7789901"
/translation="MGIDLEKLFEILAPLINGTPMNDEAVGSTFRRLMSALMTFDYVV
VFAYRGKERPLDLYSTFDAKDHVLFVSLYQAGPYLLDPFYHAACAPKPGVWRMRELAP
DRFFSSEYYRTYYVRTGLAEEVGFFVTVSEQVTVVLSLMRREATGVFGPAEFALLKKA
EPMVAALVRHHWADLDRRFDAALANMGRSRRKAVHPPADGVWQHLNLTEREAAIIELV
LQGHSSESIGLKLGISTGTVKVHRRNVYRKLGISSQTQLLSLYIKNLGQ"
misc_feature <369647..369877
/locus_tag="NGR_b03650"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:32379"
misc_feature 369704..369865
/locus_tag="NGR_b03650"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(369707..369715,369752..369760,369782..369787,
369791..369796,369800..369814,369845..369847)
/locus_tag="NGR_b03650"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(369740..369742,369746..369748,369752..369754,
369845..369853,369860..369862)
/locus_tag="NGR_b03650"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(370317..371612)
/locus_tag="NGR_b03660"
/db_xref="GeneID:7789902"
CDS complement(370317..371612)
/locus_tag="NGR_b03660"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822583.1"
/db_xref="GI:227818612"
/db_xref="GeneID:7789902"
/translation="MSRENYVTKVEKTSPRLRRRAHCLLKDDAGAVAVVAAIVFPVLV
GAMGLGAESGYWYMEQRKLQHAADVSAHAAAIRHRAGDPKPALENTALRIASASGYSP
GTMTVSTKPGLSAGSSKITVELTETHPRLFSSIFVGEPVTLSARAVAEVKGGSKACVL
ALSGSASGAVTVTGSTQVQLSGCSVVSNSSAADAFLMRNGSAVMSTDCVYTVGEAVTT
TGLTMTGCSEPIERVPPTPDPFASVAEPDRLQVQLLPCRTLDHVSNSSYVLDHLLSGV
PAIRFCGGLDIKGTITLKPGLYIIDGGDFTVTAGAKLSGEGVTFYFTNSATAKLLGNG
DIDLTAPTTGPYAGLLFFGSRRDAGVVHQVTGNSESTLEGNIYIPTGRIEFTGNSTVS
GGCTQIVANEITFTGNSAMETCASRTDEIIVGKTVMLVE"
misc_feature complement(371166..371384)
/locus_tag="NGR_b03660"
/note="Putative Tad-like Flp pilus-assembly; Region:
Tad_C; pfam09977"
/db_xref="CDD:204362"
gene 371818..372330
/gene="cpaA2"
/locus_tag="NGR_b03670"
/db_xref="GeneID:7789903"
CDS 371818..372330
/gene="cpaA2"
/locus_tag="NGR_b03670"
/codon_start=1
/transl_table=11
/product="CpaA2 pilus assembly protein"
/protein_id="YP_002822584.1"
/db_xref="GI:227818613"
/db_xref="GeneID:7789903"
/translation="MISTTATWLAFLLFAGTMTYAGIKDVMTMTISNRLVGFLLVAFA
VLAPLAGVDLPMIWSSILVASAVLAFTFTFFALGWIGGGDAKLLPVAVLWLGAGLALP
FVVCASVLGAVLTLSLMQFRKMPLPVLLQKRAWSSRLHTPQTGIPYGAAMAPAALLLL
PESHWFAALL"
misc_feature 371824..372264
/gene="cpaA2"
/locus_tag="NGR_b03670"
/note="Type IV leader peptidase family; Region:
Peptidase_A24; cl02077"
/db_xref="CDD:154734"
gene 372365..373156
/gene="cpaB2"
/locus_tag="NGR_b03680"
/db_xref="GeneID:7789904"
CDS 372365..373156
/gene="cpaB2"
/locus_tag="NGR_b03680"
/codon_start=1
/transl_table=11
/product="CpaB2, Flp pilus assembly protein CpaB"
/protein_id="YP_002822585.1"
/db_xref="GI:227818614"
/db_xref="GeneID:7789904"
/translation="MIRLVILLFALASGGAASWLALGFADQPTVEAAEVQQSPSQEVL
VAAQELARGTTLEEPHLRWQAWEGEIPPVFISRSARPDAKESLKGLLAQSSFVAGEPI
REDKLAQRGAGFLSSMLPSGKRAIAVRVTAESTAGGFILPNDHVDVIHTVARPDSSGK
DGKVVSRAVLSNIRVLAVDQTISEGADGTSVVGKTATLEADPGQIDIIAAAEASGTVS
LALRAVADNLEAPVVETEGSRPGVVRIVSGGRLSMIEVPSRSGGS"
misc_feature 372488..372685
/gene="cpaB2"
/locus_tag="NGR_b03680"
/note="SAF domains of the flagella basal body P-ring
formation protein FlgA and the flp pilus assembly CpaB;
Region: SAF_CpaB_FlgA_like; cd11614"
/db_xref="CDD:212159"
gene 373182..374924
/gene="cpaE2"
/locus_tag="NGR_b03690"
/db_xref="GeneID:7789905"
CDS 373182..374924
/gene="cpaE2"
/locus_tag="NGR_b03690"
/codon_start=1
/transl_table=11
/product="CpaE2 pilus assembly protein"
/protein_id="YP_002822586.1"
/db_xref="GI:227818615"
/db_xref="GeneID:7789905"
/translation="MKQLGKIIQEAPREPVAPLLSIPKVDIAVFCRSEALMGTVRTAA
IDRRMARATVTINEGGIEEAAALYGGVTSPNLVVVESGDEEDRLMRALEDLAMECITG
TKVIVVGRSNDVGLYKRLLDAGVSDYLVTPLDPMDFVAAVHRCFRDSVDGKLGRIVAF
IGAKGGTGSSTLAHNVALAMSKRIASDVLVADLDLQFGTLGLDFDVEAVQGMTDVLSS
PDRLDDVLLRRLTVPYTEHLHLLPTTTDLNRFFYLKEEHVDHLLDVARSSSWQIVVDL
PHIWMQWTRKILLEADEVVITATPDLASMRNVKNLVDLLKKARPNDPPPRLVLNRTDT
PKLAEIKPKDFVAAVGLEESISVPFDPQLFGKAANNGQLVIESAPESKAGQAIVSLAW
RVGGTRERRTRKKGLAGLVQRYMQQRKQKAAAGLRNKAQDLKKSEAGASAVEFALFAP
VLALGLVAMADVALALHERMTIDHVLRAGAQAAMADPGATQVDKVLQSTLAQSAKPAN
VTLAPVKRYCACPENADVKPEAAPQCGTTPCADAVQQLVFYRLEAAKYYQPMSLPEVL
PPFQLNSSMQVQVR"
misc_feature 373647..374354
/gene="cpaE2"
/locus_tag="NGR_b03690"
/note="ATPases involved in chromosome partitioning [Cell
division and chromosome partitioning]; Region: Soj;
COG1192"
/db_xref="CDD:31385"
misc_feature 373650..>373778
/gene="cpaE2"
/locus_tag="NGR_b03690"
/note="This protein family consists of proteins similar to
the cpaE protein of the Caulobacter pilus assembly and the
orf4 protein of Actinobacillus pilus formation gene
cluster. The function of these proteins are unkown. The
Caulobacter pilus assembly contains...; Region: CpaE_like;
cd03111"
/db_xref="CDD:73340"
misc_feature <373989..374174
/gene="cpaE2"
/locus_tag="NGR_b03690"
/note="This protein family consists of proteins similar to
the cpaE protein of the Caulobacter pilus assembly and the
orf4 protein of Actinobacillus pilus formation gene
cluster. The function of these proteins are unkown. The
Caulobacter pilus assembly contains...; Region: CpaE_like;
cd03111"
/db_xref="CDD:73340"
misc_feature 374436..374918
/gene="cpaE2"
/locus_tag="NGR_b03690"
/note="Flp pilus assembly protein TadG [Intracellular
trafficking and secretion]; Region: TadG; COG4961"
/db_xref="CDD:34568"
misc_feature 374496..374612
/gene="cpaE2"
/locus_tag="NGR_b03690"
/note="TadE-like protein; Region: TadE; pfam07811"
/db_xref="CDD:203769"
gene 374921..375343
/gene="tadE2"
/locus_tag="NGR_b03700"
/db_xref="GeneID:7789906"
CDS 374921..375343
/gene="tadE2"
/locus_tag="NGR_b03700"
/codon_start=1
/transl_table=11
/product="type IV pilus associated TadE family protein"
/protein_id="YP_002822587.1"
/db_xref="GI:227818616"
/db_xref="GeneID:7789906"
/translation="MTLSLFLRRAWRSQSGATAVEFALVCFPLLLLVLGVIEFGRAFY
VRNDMSYAADVAAREVLIGKIARDAPDSEAQAKLASAVRDSFDSGDPARLEIAVTKQT
VDGIDFRVLSIRYPLEFLLPGMTETSFSLALSRRIPIG"
misc_feature 374927..>375148
/gene="tadE2"
/locus_tag="NGR_b03700"
/note="Flp pilus assembly protein TadG [Intracellular
trafficking and secretion]; Region: TadG; COG4961"
/db_xref="CDD:34568"
misc_feature 374966..375094
/gene="tadE2"
/locus_tag="NGR_b03700"
/note="TadE-like protein; Region: TadE; cl10688"
/db_xref="CDD:209182"
gene complement(375362..375880)
/gene="pilQ2"
/locus_tag="NGR_b03710"
/db_xref="GeneID:7789907"
CDS complement(375362..375880)
/gene="pilQ2"
/locus_tag="NGR_b03710"
/codon_start=1
/transl_table=11
/product="type IV pilus protein PilQ1"
/protein_id="YP_002822588.1"
/db_xref="GI:227818617"
/db_xref="GeneID:7789907"
/translation="MRVVPRHVVPGHIGAGWLVPALLACTLFGAAQAAEDRPPTTALE
PTRQTEGVVRVIVDFARPLILARPASTLIIGNPTIAQATLSDDKTVILTGKTPGSTNL
IVMDAAGAEVANIILDVAAAGGRLITVDGGSGRATYSCTERCDPVQSNDETTAPPPPA
SPAPPINEGGEP"
misc_feature complement(375521..375733)
/gene="pilQ2"
/locus_tag="NGR_b03710"
/note="Pilus formation protein N terminal region; Region:
T2SS-T3SS_pil_N; pfam13629"
/db_xref="CDD:205806"
gene 376149..376310
/gene="pilA2"
/locus_tag="NGR_b03720"
/db_xref="GeneID:7789908"
CDS 376149..376310
/gene="pilA2"
/locus_tag="NGR_b03720"
/codon_start=1
/transl_table=11
/product="PilA2 pilus assembly protein"
/protein_id="YP_002822589.1"
/db_xref="GI:227818618"
/db_xref="GeneID:7789908"
/translation="MKNLLVRFVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGA
KFTAISTAL"
misc_feature 376170..376307
/gene="pilA2"
/locus_tag="NGR_b03720"
/note="Flp/Fap pilin component; Region: Flp_Fap;
pfam04964"
/db_xref="CDD:203132"
gene 376494..377837
/gene="cpaF1"
/locus_tag="NGR_b03730"
/db_xref="GeneID:7789909"
CDS 376494..377837
/gene="cpaF1"
/locus_tag="NGR_b03730"
/codon_start=1
/transl_table=11
/product="CpaF protein secretory protein kinase"
/protein_id="YP_002822590.1"
/db_xref="GI:227818619"
/db_xref="GeneID:7789909"
/translation="MPREVPKPAVVPAAAKAEKADQYYSFKKEIFSALIATIDVAALS
TMDGDEARTEIGAIVNDIVAAKKAGISMAEQNELLRDICNDILGYGPLEPLLARDDIA
DIMVNGADQVFIEVGGRVQQTGIRFRDNEQLLNICQRIVSQVGRRVDEASPICDARLA
DGSRVNVIAPPLAIDGPSLTIRKFKKEKLNLDQLVRFGSISPEGAEILKIIGRVRCNV
LISGGTGSGKTTLLNCLTGYIDDGERIITCEDAAELQLQQPHVVRLETRPPNIEGQGE
ITMRSLVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSPREAISRV
EAMITMGGHSLPGKAIREMLVSSVDVIVQAARLRDGSRRITHITEVLGMEGDVVTTQD
LFVYDILGEDGKGNIIGRHRSTGIGRPAFWDRARYYGEEARLAAALDAAEIKAAA"
misc_feature 376620..377699
/gene="cpaF1"
/locus_tag="NGR_b03730"
/note="Flp pilus assembly protein, ATPase CpaF
[Intracellular trafficking and secretion]; Region: CpaF;
COG4962"
/db_xref="CDD:34569"
misc_feature 377064..377621
/gene="cpaF1"
/locus_tag="NGR_b03730"
/note="Type IV secretory pathway component VirB11, and
related ATPases. The homohexamer, VirB11 is one of eleven
Vir proteins, which are required for T-pilus biogenesis
and virulence in the transfer of T-DNA from the Ti
(tumor-inducing) plasmid of bacterial to...; Region:
VirB11-like_ATPase; cd01130"
/db_xref="CDD:29996"
misc_feature order(377073..377075,377166..377183,377598..377600)
/gene="cpaF1"
/locus_tag="NGR_b03730"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29996"
misc_feature order(377157..377162,377172..377180)
/gene="cpaF1"
/locus_tag="NGR_b03730"
/note="Walker A motif; other site"
/db_xref="CDD:29996"
misc_feature order(377163..377168,377223..377225,377247..377249,
377268..377279,377283..377288,377355..377363,
377367..377369,377406..377408,377418..377420,
377427..377432,377460..377468,377478..377480,
377487..377489,377589..377591)
/gene="cpaF1"
/locus_tag="NGR_b03730"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:29996"
misc_feature 377370..377387
/gene="cpaF1"
/locus_tag="NGR_b03730"
/note="Walker B motif; other site"
/db_xref="CDD:29996"
gene 377882..378880
/gene="tadB1"
/locus_tag="NGR_b03740"
/db_xref="GeneID:7789910"
CDS 377882..378880
/gene="tadB1"
/locus_tag="NGR_b03740"
/codon_start=1
/transl_table=11
/product="pilus assembly protein TadB"
/protein_id="YP_002822591.1"
/db_xref="GI:227818620"
/db_xref="GeneID:7789910"
/translation="MLSASLFPVLIFFLASSFVGGLMLAAFYPRTVKASAYRQRFERV
AGHTQINRTGSADESRDRRRSVEKTLRDIEEQQKAHVRKGRKPKLEARLRQAGLGWST
RAYWVACAGTGLAIYVLVALLGLGAFAALGFATAGGLYLPHFHVNTTRNRRLKRFTAE
FPNAVDVIVRGLKAGLPMTDCLRVIAAEAQEPVKGEFLTIAHDQTLGLPVDEAVERLC
ERMPLPEARFFAIVITIQSRTGGSLSEALGNLSKVLRERKKMKAKIKAMSAEAKSSAG
IIGALPFFVAGAVYLTSPDYMSLLFTTMTGKMVLVGSALWMGIGTLLMRKMINFDF"
misc_feature 377900..378877
/gene="tadB1"
/locus_tag="NGR_b03740"
/note="Flp pilus assembly protein TadB [Intracellular
trafficking and secretion]; Region: TadB; COG4965"
/db_xref="CDD:34572"
misc_feature 378371..378754
/gene="tadB1"
/locus_tag="NGR_b03740"
/note="Type II secretion system (T2SS), protein F; Region:
T2SF; pfam00482"
/db_xref="CDD:201255"
gene 378889..379860
/gene="tadC2"
/locus_tag="NGR_b03750"
/db_xref="GeneID:7789911"
CDS 378889..379860
/gene="tadC2"
/locus_tag="NGR_b03750"
/codon_start=1
/transl_table=11
/product="type IV pilus protein TadC"
/protein_id="YP_002822592.1"
/db_xref="GI:227818621"
/db_xref="GeneID:7789911"
/translation="MNLGAHIPDPDQLSAMLTGIAAFSAVVAVSWPYVFRNTLAERMR
KVESERERIRQRERTRLNAEKSKVALRAEPRRFFQAIVDRFNLAKQAENSDILRQLSM
AGYRGYAPVTTFLAFRLIAPIVLFAACLLYILLVLRPQAPLLAVIAMAGAMGSLGYFA
PAIFIRNRITKRQQAIRRAWPEALDLLLITVESGMGIESAFRKVGEEIGAQSPEVAEE
ILLTTAELSYLQDRRQAFENLGQRTGVEGVRAVVTSLIQAEKYGTPLGQALRVMAQEN
RDMRMSEAEKKAAALPPKLTVPMIVFFLPVLFAVIVTPAAIQISGIQ"
misc_feature 379090..379851
/gene="tadC2"
/locus_tag="NGR_b03750"
/note="Flp pilus assembly protein TadC [Cell motility and
secretion / Intracellular trafficking and secretion];
Region: TadC; COG2064"
/db_xref="CDD:32247"
misc_feature <379255..>379728
/gene="tadC2"
/locus_tag="NGR_b03750"
/note="Flp pilus assembly protein TadB [Intracellular
trafficking and secretion]; Region: TadB; COG4965"
/db_xref="CDD:34572"
gene complement(380015..381061)
/gene="cheB1"
/locus_tag="NGR_b03760"
/db_xref="GeneID:7789912"
CDS complement(380015..381061)
/gene="cheB1"
/locus_tag="NGR_b03760"
/codon_start=1
/transl_table=11
/product="CheB, chemotaxis response regulator containing a
CheY-like receiver domain and a methylesterase domain
CheB"
/protein_id="YP_002822593.1"
/db_xref="GI:227818622"
/db_xref="GeneID:7789912"
/translation="MVRILLATSRVDLQELVERAVRSDASAELLGVARSFAEAVTMAR
QLSPDIVTMELRLGEHDSVEAVREIMVSAPAPIVMVSRVEELGSVAARALDAGALAVI
PAPPPVDGRLEKAATEKFLSTIKAMAHVKVVRQWRKKSGGDGRNDQGDLAAAHAPIGI
VGIAASTGGPAAIRSILMNVSSKFPAPILIVQHMSSGFIDRVAASLDATVPLNVKVAT
DGERLRAGMVYLAPDGRQLGVSGRSRIRVVNDAPVDGFKPSGSYLFGSIARAFKGEAL
AVILTGMGNDGTEGLRALREAGGKAIAQDEESSVVFGMPKSAIGAGLVDFVLPLESIG
GKIVALAEGRESGT"
misc_feature complement(380030..381016)
/gene="cheB1"
/locus_tag="NGR_b03760"
/note="chemotaxis-specific methylesterase; Provisional;
Region: PRK00742"
/db_xref="CDD:179106"
misc_feature complement(<380819..>380974)
/gene="cheB1"
/locus_tag="NGR_b03760"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cl09944"
/db_xref="CDD:209106"
misc_feature complement(380900..380902)
/gene="cheB1"
/locus_tag="NGR_b03760"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(380876..380884,380888..380893))
/gene="cheB1"
/locus_tag="NGR_b03760"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(380042..380584)
/gene="cheB1"
/locus_tag="NGR_b03760"
/note="CheB methylesterase; Region: CheB_methylest;
pfam01339"
/db_xref="CDD:144802"
gene complement(381070..383196)
/gene="cheA1"
/locus_tag="NGR_b03770"
/db_xref="GeneID:7789913"
CDS complement(381070..383196)
/gene="cheA1"
/locus_tag="NGR_b03770"
/EC_number="2.7.3.-"
/codon_start=1
/transl_table=11
/product="chemotaxis protein CheA"
/protein_id="YP_002822594.1"
/db_xref="GI:227818623"
/db_xref="GeneID:7789913"
/translation="MKAEELDRQLLTIFAREVRLRSSDMARILIGIDEAGDAEDKRRL
QDELLRMAHSLKGAAGLVEVRGIESICHWMEEVLMRASKEQSALSRLELDVLLRAADA
IKEAGRLLAGGEMPSSAKTGSVVRELEATVTPGVAYGNMPPGPPPPSAEHQVPVRSTD
LDGSMRVSADRLDALLHRSGELLAFDAVVRTHAERASDLREQAGRLRTVGSFSETDAA
GIENGLRELAASLHSNGRLLHSAVTALSHEVRRARTQPFAAACKGLERIVRDMAAHVN
KSATLEIRGGEIDIDRSILAGLQDSLRHLVRNAVAHGIQSPEERRLAGKPEKGRIVVS
ASVSGDRVQVVVKDDGRGLDMASLRKLADRAPIASEDEGDLLQRVFEPGISTSASVDR
LAGRGIGLDIVRRAVEDMRGTAAVAQVPEGGAAFTLTLPLTLATVRALVVHVAGHVLT
IDTSCVERVIRVSAENIGFEQERQVVTTEVGTFSLVDLAHWLGLRAAGEPISREARPA
IIIRAGGREAAVLVDEIAAEQELLARSLGPRLEKVRRYCGAMVLPDGRIALLLNTSLL
CAPAPESFAASIPDAAQFRKPKRRKVLVVDDSKYIRTLVRLILQAAGYDVAMASDGQE
ALQHLHHQEVDVVVADVDMPSMNGFELTQAIRRSERLAGLPIILVTGREAPEDKAHGL
ELGANAYVAKNQFDAHQFLETVSQVV"
misc_feature complement(382879..383178)
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="Histidine Phosphotransfer domain, involved in
signalling through a two part component systems in which
an autophosphorylating histidine protein kinase serves as
a phosphoryl donor to a response regulator protein; the
response regulator protein is...; Region: HPT; cd00088"
/db_xref="CDD:28972"
misc_feature complement(order(382972..382974,382981..382983,
383026..383031,383038..383040))
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="putative binding surface; other site"
/db_xref="CDD:28972"
misc_feature complement(383038..383040)
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="active site"
/db_xref="CDD:28972"
misc_feature complement(381499..>382743)
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="Chemotaxis protein histidine kinase and related
kinases [Cell motility and secretion / Signal transduction
mechanisms]; Region: CheA; COG0643"
/db_xref="CDD:30988"
misc_feature complement(381928..382305)
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(381928..381930,381943..381945,
381949..381951,381997..382008,382138..382143,
382147..382149,382153..382155,382159..382161,
382264..382266,382273..382275,382285..382287))
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(382273..382275)
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(382000..382002,382006..382008,
382141..382143,382147..382149))
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature complement(381511..>381639)
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="CheW-like domain. CheW proteins are part of the
chemotaxis signalling mechanism in bacteria. CheW
interacts with the methyl accepting chemotaxis proteins
(MCPs) and relays signals to CheY, which affects flageller
rotation. This family includes CheW and...; Region:
CheW_like; cl00256"
/db_xref="CDD:206936"
misc_feature complement(381073..381438)
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="FOG: CheY-like receiver [Signal transduction
mechanisms]; Region: CheY; COG0784"
/db_xref="CDD:31127"
misc_feature complement(381073..381420)
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(381115..381117,381121..381123,
381130..381132,381187..381189,381253..381255,
381277..381279,381406..381411))
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(381277..381279)
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(381253..381261,381265..381270))
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(order(381112..381117,381121..381123))
/gene="cheA1"
/locus_tag="NGR_b03770"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(383193..384827)
/locus_tag="NGR_b03780"
/db_xref="GeneID:7789914"
CDS complement(383193..384827)
/locus_tag="NGR_b03780"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis protein"
/protein_id="YP_002822595.1"
/db_xref="GI:227818624"
/db_xref="GeneID:7789914"
/translation="MKLLRTKSLYGMLGLAMLLFAVASALLVGSSFIALERVRADLAA
ASSLSKERIFYQMLYRVGRLPGPNDPNRPAAVSELRDLMQRNEQMLARLAGGDEALGF
ALEANPEAIAQLEQLRQLWQHQVKPALERTISQAPPSQAVLEELDRHIRTYAARINEK
IDGIEQTAATRLYRSQMLQLGLSALAIVLLFLVLRVVRHYAGRVRILVDVAKGVSAGN
LDQRAIVTGYDELSVLGASFNGMTAKLAGMIENERAARERLEDLLATISETSQHLSSS
AAEILAGTTQQVEGMRDQSTAVAETVTSVDDVLQTSEQAAQRAQQVAASYETAVKVSS
EGRTALDNTVTTMNAVNARTGAIAGNILLLAENSLEIGEIVSVVAEIADQTNLLALNA
AIEASRAGEHGRGFSVVASEIRTLADQSKTATTRVRRILMEIQKSTNAAVVGAEEGSK
SVGRALETVKEAGETIRQLEAIIGDSARSVAQIAASAGQQKAGMKQIHDAMHYIQQAS
SQNLSAIRQAEEAAKDLNELGSRLRDMLADHSNGRR"
misc_feature complement(384387..>384665)
/locus_tag="NGR_b03780"
/note="Type IV pili methyl-accepting chemotaxis transducer
N-term; Region: PilJ; pfam13675"
/db_xref="CDD:205851"
misc_feature complement(384078..384221)
/locus_tag="NGR_b03780"
/note="HAMP (Histidine kinases, Adenylyl cyclases, Methyl
binding proteins, Phosphatases) domain; Region: HAMP;
smart00304"
/db_xref="CDD:197640"
misc_feature complement(order(384093..384098,384105..384110,
384114..384119,384126..384131,384135..384140,
384186..384188,384192..384197,384204..384209,
384213..384218))
/locus_tag="NGR_b03780"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(383217..384014)
/locus_tag="NGR_b03780"
/note="Methyl-accepting chemotaxis-like domains
(chemotaxis sensory transducer); Region: MA; smart00283"
/db_xref="CDD:197627"
misc_feature complement(383313..383954)
/locus_tag="NGR_b03780"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature complement(order(383316..383321,383328..383330,
383337..383342,383349..383351,383358..383363,
383367..383372,383379..383384,383388..383393,
383400..383402,383409..383414,383421..383423,
383430..383435,383442..383447,383451..383456,
383463..383465,383472..383477,383484..383486,
383493..383498,383535..383540,383547..383552,
383556..383561,383568..383573,383580..383582,
383589..383594,383601..383603,383610..383612,
383622..383624,383643..383645,383652..383654,
383664..383666,383673..383678,383685..383687,
383694..383696,383703..383708,383715..383720,
383727..383729,383736..383741,383745..383747,
383757..383762,383766..383771,383778..383780,
383787..383792,383799..383804,383811..383813,
383820..383825,383832..383834,383841..383846,
383892..383897,383904..383906,383913..383918,
383925..383930))
/locus_tag="NGR_b03780"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature complement(383577..383678)
/locus_tag="NGR_b03780"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene complement(384824..385462)
/locus_tag="NGR_b03790"
/db_xref="GeneID:7789915"
CDS complement(384824..385462)
/locus_tag="NGR_b03790"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822596.1"
/db_xref="GI:227818625"
/db_xref="GeneID:7789915"
/translation="MIALDRKIRPDWADVKRRIAMALEETEALLGSAAQDAEAAGQQN
FPLTRSDVEMGEEPEGSARFVSFVLSGRRLALEVRYVCEIVSMARVTPLPGMPTYVRG
IFDLRGQLLPVFDLRSLLHLPDALSPDSDWVIVCGEMQAELLIVAEGMPEISRVFAPD
SASFGNEDGPEWASATASQDTIVLDGALLLSDRRFFLESEQPVGEIAGDERP"
misc_feature complement(<384995..385324)
/locus_tag="NGR_b03790"
/note="Chemotaxis signal transduction protein [Cell
motility and secretion / Signal transduction mechanisms];
Region: CheW; COG0835"
/db_xref="CDD:31177"
gene complement(385449..386387)
/locus_tag="NGR_b03800"
/db_xref="GeneID:7789916"
CDS complement(385449..386387)
/locus_tag="NGR_b03800"
/codon_start=1
/transl_table=11
/product="CheR, methylase of chemotaxis methyl-accepting
proteins CheR"
/protein_id="YP_002822597.1"
/db_xref="GI:227818626"
/db_xref="GeneID:7789916"
/translation="MRRAPAKARSTRASLPPSRSVKDEDVENMSGAMLLQAGALAGRI
ADRIGLSIAASRKEAAVSAIGRVMARRGLNHVSDLLGQIDADEDLKEEFIDELTVGET
HFFRGAAQFDLIRDTILPERCRSRLIGSPLRIWSLGCASGEEPYSLAILCEADNLSSR
VEITASDISRKALSDAAEAEYGEWSLRNTGECWRQRYFLRSGSRYRVRPDLARRVTLT
KVALGADVLPAPQIGLADFDLILCRNVLVYLDAAAVHRIARQLFTCLVKGGWLMTAPT
DPPLWKYAPFETSITSAGAVYRRAVSGRERPADDRP"
misc_feature complement(385491..386258)
/locus_tag="NGR_b03800"
/note="Methylase of chemotaxis methyl-accepting proteins
[Cell motility and secretion / Signal transduction
mechanisms]; Region: CheR; COG1352"
/db_xref="CDD:31543"
misc_feature complement(385569..385991)
/locus_tag="NGR_b03800"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(385659..385661,385710..385718,
385884..385889,385959..385979))
/locus_tag="NGR_b03800"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(386495..387178)
/locus_tag="NGR_b03810"
/db_xref="GeneID:7789917"
CDS complement(386495..387178)
/locus_tag="NGR_b03810"
/codon_start=1
/transl_table=11
/product="CitB, response regulator containing a CheY-like
receiver domain and an HTH DNA-binding domain CitB"
/protein_id="YP_002822598.1"
/db_xref="GI:227818627"
/db_xref="GeneID:7789917"
/translation="MNAFGVALVADDDEFFRIALAAILKTKLGFSDVVETGSLDEAIE
RLADRDDVSLALFDLTMPGMESAASLGAVREVHPDVKVAVVSASSRRNDILASLAAGI
HGYVPKSLGASDLAAALRVILNGAIYVPPSLAGCTPRSAESEPPPAATGHSDEPSRRT
IDFLTPRQREVLLLLVEGLSNKEIARKLRLGEGTVKIHMAALFRSLRVRNRQEAAAAG
ARLLPIAQR"
misc_feature complement(386540..387157)
/locus_tag="NGR_b03810"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:32379"
misc_feature complement(386810..387157)
/locus_tag="NGR_b03810"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(386852..386857,386864..386866,
386921..386923,386981..386983,387005..387007,
387143..387148))
/locus_tag="NGR_b03810"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(387005..387007)
/locus_tag="NGR_b03810"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(386981..386989,386993..386998))
/locus_tag="NGR_b03810"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(386849..386857)
/locus_tag="NGR_b03810"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(386540..386689)
/locus_tag="NGR_b03810"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(386546..386548,386579..386593,
386597..386602,386606..386611,386633..386641,
386678..386686))
/locus_tag="NGR_b03810"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(386540..386548,386639..386641,
386645..386647,386651..386653))
/locus_tag="NGR_b03810"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene 387181..387348
/locus_tag="NGR_b03820"
/db_xref="GeneID:7789918"
CDS 387181..387348
/locus_tag="NGR_b03820"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822599.1"
/db_xref="GI:227818628"
/db_xref="GeneID:7789918"
/translation="MLPQVQVDRISASMEKVGPPMKVTNVLQLTIVPAARFPLSACTV
NFFREFLSQLF"
gene complement(387737..388198)
/locus_tag="NGR_b03830"
/db_xref="GeneID:7789919"
CDS complement(387737..388198)
/locus_tag="NGR_b03830"
/codon_start=1
/transl_table=11
/product="fic family protein"
/protein_id="YP_002822600.1"
/db_xref="GI:227818629"
/db_xref="GeneID:7789919"
/translation="MLRQLLLNLSLYFKSRRPDYYRLLQEVREYGTWEAWLEFFLDGV
AETADQTFETASRIARLLDDDRGRIVRESERTGSVLQIHDIMRTSPYLTAASAAKRSA
LTVPTVNAALDQLQRLGIVEEATGRRRGRVFVYRAYMDILSDGAGTDAARS"
misc_feature complement(387794..>388183)
/locus_tag="NGR_b03830"
/note="Fic family protein [Function unknown]; Region:
COG3177"
/db_xref="CDD:32990"
gene complement(388255..388647)
/locus_tag="NGR_b03840"
/db_xref="GeneID:7789920"
CDS complement(388255..388647)
/locus_tag="NGR_b03840"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822601.1"
/db_xref="GI:227818630"
/db_xref="GeneID:7789920"
/translation="MPLSISCFTGDSSSSRAWLSALLVLRPWTKRFGGHQAARDAGSL
IRLYLTGLLLNISNPRMPISYLALLPGVLGTRPLTVYHTAELLVIIAPIEVIVVGGHT
LIGYGAETVLADQRPASSTSSLKPFIPS"
gene complement(388675..389262)
/locus_tag="NGR_b03850"
/db_xref="GeneID:7789921"
CDS complement(388675..389262)
/locus_tag="NGR_b03850"
/codon_start=1
/transl_table=11
/product="[NiFe]-hydrogenase/urease accessory protein"
/protein_id="YP_002822602.1"
/db_xref="GI:227818631"
/db_xref="GeneID:7789921"
/translation="MNFKTLTALAIITASLPGQALAHSGNDHVHGVASGLLHPFSGVD
HLLAMIAVGLIAGRLGGSALFRLPLAFVSAMVAGAAYVLTGVTVPLVEAAVITSVILL
GAALIANANIPATLAITGAATFGFFHGFAHGTEGPAAAPLGHILGFIGGTVILHITGM
TVWHALARRGTGPMPAHRIIGTGIIGAGIGLAFIA"
misc_feature complement(388753..389232)
/locus_tag="NGR_b03850"
/note="HupE / UreJ protein; Region: HupE_UreJ; pfam04955"
/db_xref="CDD:147231"
gene complement(389288..389821)
/locus_tag="NGR_b03860"
/db_xref="GeneID:7789922"
CDS complement(389288..389821)
/locus_tag="NGR_b03860"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822603.1"
/db_xref="GI:227818632"
/db_xref="GeneID:7789922"
/translation="MHGGHHHHHGAHSHHRDHDHDHDHHGHQHAGPGHNRQRGTVQWQ
VPHRPTRKDLSPPHERDLDLVEASFVENFARASDATSFLRLAGIPFVGIDASGKALHL
LRVEIADRTDIGAVVPLLGGNGVRYDVLPARMTSRRHDLSFLYHDGEAVVRLSFAEAR
KLEDRTDASHFDIEPTE"
gene complement(389832..391037)
/locus_tag="NGR_b03870"
/db_xref="GeneID:7789923"
CDS complement(389832..391037)
/locus_tag="NGR_b03870"
/codon_start=1
/transl_table=11
/product="SpeB, Arginase/agmatinase/formimionoglutamate
hydrolase, arginase family"
/protein_id="YP_002822604.1"
/db_xref="GI:227818633"
/db_xref="GeneID:7789923"
/translation="MREPPSRQARRAGAMHAPVRERRHHPDFNMLDSQGWKALEAEAK
LSGKGWGREKQWALEMGLPGSESLTDKSIPTFARGELPHFAGINTFLKAPYVENVRDV
GKYDAAVLGIPFDSGTTYRPGTRFGPQGIRRISALYTPYNYEMGVDLREQMTLCDAGD
VFTIPANLEKSFDQITRGVSHVFSSGALPIMLGGDHSIGFPCVRGIAECTSKRIGIIH
FDRHIDIQQKDLDERMHTTPWYWATNLPNVSPKNLVQLGIGGWQVPRDGVKVARERGT
NVLTIDDIEKLGPEKTAEIALELAWKDADAVYISFDVDSIDCGFVPGTGWPEPGGFLP
REALKILGLVAAEGLCGLEVVEVSPPYDTSDITALFGVRVVVEALGSMLAHGKLGSHK
HLIDKPVSF"
misc_feature complement(390855..>390947)
/locus_tag="NGR_b03870"
/note="Peptidase; Region: DUF3663; pfam12404"
/db_xref="CDD:152839"
misc_feature complement(389901..390719)
/locus_tag="NGR_b03870"
/note="Agmatinase-like family; Region: Agmatinase-like;
cd09990"
/db_xref="CDD:212516"
misc_feature complement(order(389970..389972,390096..390098,
390102..390104,390330..390335,390366..390374,
390378..390380,390450..390452))
/locus_tag="NGR_b03870"
/note="active site"
/db_xref="CDD:212516"
misc_feature complement(order(389970..389972,390096..390098,
390102..390104,390330..390335,390366..390374,
390378..390380,390450..390452))
/locus_tag="NGR_b03870"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:212516"
misc_feature complement(order(390096..390098,390102..390104,
390366..390368,390372..390374,390378..390380,
390450..390452))
/locus_tag="NGR_b03870"
/note="Mn binding site [ion binding]; other site"
/db_xref="CDD:212516"
gene complement(391030..391836)
/locus_tag="NGR_b03880"
/db_xref="GeneID:7789924"
CDS complement(391030..391836)
/locus_tag="NGR_b03880"
/codon_start=1
/transl_table=11
/product="TauB, ABC-type nitrate/sulfonate/bicarbonate
transport system, ATPase component TauB"
/protein_id="YP_002822605.1"
/db_xref="GI:227818634"
/db_xref="GeneID:7789924"
/translation="MSEIRVHNVWMEYGDQIVLEGVSLDIAPGAFVSVVGPSGCGKST
FLRMILGQERPTRGIITLDGAGLPGEPGSDRGVVFQRYSVFPHLNVLQNVLIAYEFAE
SPFLAKLFGAKRKAASEKAEALLQAVGLSEHAWKYPSALSGGQQQRLAIAQALAKEPK
VLLLDEPFGALDPGTRAQMHALIKPLWRERGMTVIMVTHDLKEAFGLGTRLLAFDKPR
IDPQAPERYGARIIYDLDLSRDGPVPILGFSRPIEPNTMSQETKRSMPHA"
misc_feature complement(391105..391836)
/locus_tag="NGR_b03880"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
system, ATPase component [Inorganic ion transport and
metabolism]; Region: TauB; COG1116"
/db_xref="CDD:31313"
misc_feature complement(391132..391827)
/locus_tag="NGR_b03880"
/note="NrtD and SsuB are the ATP-binding subunits of the
bacterial ABC-type nitrate and sulfonate transport
systems, respectively. ABC transporters are a large
family of proteins involved in the transport of a wide
variety of different compounds, like sugars; Region:
ABC_NrtD_SsuB_transporters; cd03293"
/db_xref="CDD:73052"
misc_feature complement(391708..391731)
/locus_tag="NGR_b03880"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73052"
misc_feature complement(order(391240..391242,391339..391344,
391597..391599,391705..391713,391717..391722))
/locus_tag="NGR_b03880"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73052"
misc_feature complement(391597..391608)
/locus_tag="NGR_b03880"
/note="Q-loop/lid; other site"
/db_xref="CDD:73052"
misc_feature complement(391387..391416)
/locus_tag="NGR_b03880"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73052"
misc_feature complement(391339..391356)
/locus_tag="NGR_b03880"
/note="Walker B; other site"
/db_xref="CDD:73052"
misc_feature complement(391321..391332)
/locus_tag="NGR_b03880"
/note="D-loop; other site"
/db_xref="CDD:73052"
misc_feature complement(391234..391254)
/locus_tag="NGR_b03880"
/note="H-loop/switch region; other site"
/db_xref="CDD:73052"
gene complement(391833..392657)
/locus_tag="NGR_b03890"
/db_xref="GeneID:7789925"
CDS complement(391833..392657)
/locus_tag="NGR_b03890"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822606.1"
/db_xref="GI:227818635"
/db_xref="GeneID:7789925"
/translation="MRRAINIVPGSGTRILLALLPFLLIACLYVVVSAERRAANPGDK
LLPPIAEMATSMDRLATEPDRRSGDLTLWSDTTASLQRLFIGLGAAAAIGLVLGLTLG
LLPVASAGLSPLVAVISMVPPMAILPVLFIILGLGELSKVVLIVIGIAPFLVRDLAMT
VAAIPSEQIVKAQTLGASTWQVMLRVALPQAMPRLIEAMRLSLGPAFLFLISAEAIAA
ESGLGYRIFLVRRYLAMDVILPYVAWITLIAYVLDWLLARIARRGFPWAYAQEARR"
misc_feature complement(391845..>392456)
/locus_tag="NGR_b03890"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
system, permease component [Inorganic ion transport and
metabolism]; Region: TauC; COG0600"
/db_xref="CDD:30945"
misc_feature complement(391899..392327)
/locus_tag="NGR_b03890"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(391905..391910,391917..391922,
391926..391931,391938..391943,391971..391976,
392013..392018,392025..392036,392055..392057,
392064..392069,392109..392111,392160..392162,
392169..392174,392184..392186,392190..392195,
392202..392204,392208..392210,392214..392219,
392265..392267,392271..392276,392283..392312,
392316..392327))
/locus_tag="NGR_b03890"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(392019..392036,392265..392309))
/locus_tag="NGR_b03890"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(391941..391943,391971..391973,
391980..391982,392016..392018,392232..392234,
392265..392267))
/locus_tag="NGR_b03890"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(392088..392090,392100..392105,
392121..392159))
/locus_tag="NGR_b03890"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(392738..393820)
/locus_tag="NGR_b03900"
/db_xref="GeneID:7789926"
CDS complement(392738..393820)
/locus_tag="NGR_b03900"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_002822607.1"
/db_xref="GI:227818636"
/db_xref="GeneID:7789926"
/translation="MRFGNGRFGFRALSVALGLSLTLLASGTRAEPKKEFNIAWTIYV
GWMPWPYAADAGIVKKWADKYGITINVKQVNDYIESINQYTAGSFDGVTATNMDGLTI
PAAGGVDTTILIVGDFSNGNDGIVSKTAKTPAHLKGESINLVELSVSHYLLARALETA
GLSERDVTIVNTSDADMVAAFKSPETSTVVTWNPLLAEVKAEPGSAALFDSTQIPGEI
IDTMMVNTEVLKDNPNFGKALAGIWYEIMSVLTDPGEKGKTARTAMGTMSGTDLAGFE
AQLAATKLFATPQEAVSFTESEDLVRTMELVRTFSFDHGLLGDGAADKDVVGIAFPGG
QVLGSADNVKLRFDASYMKLAADGSL"
misc_feature complement(392945..393736)
/locus_tag="NGR_b03900"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
systems, periplasmic components [Inorganic ion transport
and metabolism]; Region: TauA; COG0715"
/db_xref="CDD:31059"
misc_feature complement(392741..393724)
/locus_tag="NGR_b03900"
/note="ABC transporter periplasmic binding protein, urea
carboxylase region; Region: ABC_peri_uca; TIGR03427"
/db_xref="CDD:211819"
misc_feature 393914..394021
/note="NGR_b03910; cis acting element, ykkC-yxkD, RF00442"
gene complement(394280..396085)
/locus_tag="NGR_b03920"
/db_xref="GeneID:7789927"
CDS complement(394280..396085)
/locus_tag="NGR_b03920"
/note="catalyzes the hydrolysis of allophanate"
/codon_start=1
/transl_table=11
/product="allophanate hydrolase"
/protein_id="YP_002822608.1"
/db_xref="GI:227818637"
/db_xref="GeneID:7789927"
/translation="MKDGQAFDIASLHAAYRSGWSVAETIKTVFERIAAVDDLGIFLH
LADRSELLDEAAALGAFDPVAKPLWGIPFAVKDNIDVAGMPTTAACPDYAYLAERDAT
VVRLLREAGALVVGKTNLDQFATGLVGVRTPYPAPRNAIDPALVPGGSSSGSAVATAH
GIVSFALGTDTAGSGRIPAGLNNIVGLKPSIGALSTTGVVPACRTLDCVSIFALAVAD
AYQIFQVAARPDATDSYSRDIAPRGGLSLPPVLKVGVPATADRRFFGDVLMESAYADA
LQMLRSLGHQIVELPFADFYATAALLYEGAWVSERYAAVKDFFDANETSFHPVTREIY
GGAKALSAADAFEGFYALQALKRKVAPLIASVDMICVPTAPTHFTRMEVEAEPIRENA
RLGIYTNFVNLLDMCGMAVPTGHRSDGRPASVTLLAPAGKDHLTASLAAELHRLSALP
LGATGWPQPANYLPAATDEGQMIELVVVGAHLSGMPLNAQLRDLGARFSRRALTAKCY
RLYALSSTEPAKPGLVRCQESEGASIEVEVWKLGAEAFGLFVAAVPSPLAIGTVQLAD
GTACKGFLVEPAGLAGAADISRYGGWRAYIASLAA"
misc_feature complement(394283..396085)
/locus_tag="NGR_b03920"
/note="allophanate hydrolase; Provisional; Region:
PRK08186"
/db_xref="CDD:181276"
misc_feature complement(394778..396016)
/locus_tag="NGR_b03920"
/note="Amidase; Region: Amidase; cl11426"
/db_xref="CDD:212316"
gene complement(396090..396437)
/locus_tag="NGR_b03930"
/db_xref="GeneID:7789928"
CDS complement(396090..396437)
/locus_tag="NGR_b03930"
/codon_start=1
/transl_table=11
/product="allophanate hydrolase"
/protein_id="YP_002822609.1"
/db_xref="GI:227818638"
/db_xref="GeneID:7789928"
/translation="MPETTRESLTQGSWRDLEFEPFRDGVMIHWIRHFDGGQPGVALL
RYEAGASVPRHRHDGLETILVLTGTQSDESGDYGVGTYIVNAAGTEHSVWSDTGCVVL
IQWYRPVTMLEGN"
misc_feature complement(396129..396341)
/locus_tag="NGR_b03930"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:212615"
gene complement(396430..397098)
/locus_tag="NGR_b03940"
/db_xref="GeneID:7789929"
CDS complement(396430..397098)
/locus_tag="NGR_b03940"
/codon_start=1
/transl_table=11
/product="cysteine hydrolase"
/protein_id="YP_002822610.1"
/db_xref="GI:227818639"
/db_xref="GeneID:7789929"
/translation="MAEIKAEPFPFRLDRDAVALIVIDMQRDFTEEGGFGESLGNDVA
RVAKIVPDVKRLIEGFRAAGLPVIHTMECHRPDLSDLPRAKRERGRPHFRIGDEGPMG
RILIAGEPGTAILPELAPAVGETVIEKPGKGAFYATPLDYILKERDIGQLVFAGVTTE
VCVQTTMREANDRGYECLLVEEATESYFPEFKSATLAMIRAQGAIVGWTAHLADVLRG
IAHA"
misc_feature complement(396481..397044)
/locus_tag="NGR_b03940"
/note="Isochorismatase family; Region: Isochorismatase;
pfam00857"
/db_xref="CDD:201475"
misc_feature complement(396499..397044)
/locus_tag="NGR_b03940"
/note="Cysteine hydrolases; This family contains
amidohydrolases, like CSHase (N-carbamoylsarcosine
amidohydrolase), involved in creatine metabolism and
nicotinamidase, converting nicotinamide to nicotinic acid
and ammonia in the pyridine nucleotide cycle. It...;
Region: cysteine_hydrolases; cd00431"
/db_xref="CDD:29548"
misc_feature complement(order(396613..396615,396712..396714,
397027..397029))
/locus_tag="NGR_b03940"
/note="catalytic triad [active]"
/db_xref="CDD:29548"
misc_feature complement(396625..396630)
/locus_tag="NGR_b03940"
/note="conserved cis-peptide bond; other site"
/db_xref="CDD:29548"
gene complement(397098..398642)
/locus_tag="NGR_b03950"
/db_xref="GeneID:7789930"
CDS complement(397098..398642)
/locus_tag="NGR_b03950"
/codon_start=1
/transl_table=11
/product="ABC transporter ATPase"
/protein_id="YP_002822611.1"
/db_xref="GI:227818640"
/db_xref="GeneID:7789930"
/translation="MIIGEIPAPKSIPAVGIETVEMTMRFGSFTALDQVSIKVPAGTF
HALLGENGAGKSTLVKCIMGFYHPTSGQLQVDGREVAIASPRDAAAHGLGMVYQHFTL
VPSLTGAENLVISRARVPAIINWSKEKKRLCAFMQTMPFDIPLDRPVSELAAGEKQKL
EIIKQLYLGRRFLVLDEPTSVLTPAEADDMLGLVRGMTERGELTVLMISHKFHEVTKF
AGAVSVLRRGRLSGTGRVSELSTADMAGMMIGDVKLAELDTRLPVSPDAAPVLAVKKV
KAPDRTGLKPIEIDELVVRSGEIVGIAGISGNGQKELSEVLAGQRTAEGAVIVKGKPY
GATRPETRANNVRFIPEEPLNNACAQKMTVTENLAFRTFDLAKDGSDAIWLDARGMKK
RATALITDFKVKTASPASPIAALSGGNVQRAVLARELSGDVDLLIVSNPCFGLDFSAV
AEIRARIMKARNAGAAVLLMSEDLDELMEMSDRIIVMSDGKLVYETPTRDADVAVIGA
HMAGHH"
misc_feature complement(397107..398600)
/locus_tag="NGR_b03950"
/note="ABC-type uncharacterized transport systems, ATPase
components [General function prediction only]; Region:
COG3845"
/db_xref="CDD:33636"
misc_feature complement(397944..398594)
/locus_tag="NGR_b03950"
/note="This family represents the domain I of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses...; Region: ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:72975"
misc_feature complement(398475..398498)
/locus_tag="NGR_b03950"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72975"
misc_feature complement(order(398013..398015,398112..398117,
398349..398351,398472..398480,398484..398489))
/locus_tag="NGR_b03950"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72975"
misc_feature complement(398349..398360)
/locus_tag="NGR_b03950"
/note="Q-loop/lid; other site"
/db_xref="CDD:72975"
misc_feature complement(398160..398189)
/locus_tag="NGR_b03950"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72975"
misc_feature complement(398112..398129)
/locus_tag="NGR_b03950"
/note="Walker B; other site"
/db_xref="CDD:72975"
misc_feature complement(398094..398105)
/locus_tag="NGR_b03950"
/note="D-loop; other site"
/db_xref="CDD:72975"
misc_feature complement(398007..398027)
/locus_tag="NGR_b03950"
/note="H-loop/switch region; other site"
/db_xref="CDD:72975"
misc_feature complement(397167..397769)
/locus_tag="NGR_b03950"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene complement(398639..399355)
/locus_tag="NGR_b03960"
/db_xref="GeneID:7788136"
CDS complement(398639..399355)
/locus_tag="NGR_b03960"
/codon_start=1
/transl_table=11
/product="cysteine hydrolase"
/protein_id="YP_002822612.1"
/db_xref="GI:227818641"
/db_xref="GeneID:7788136"
/translation="MNSLGSLPITSHKLSHIDADPYPWPYNGDLRPENTALIIIDMQT
DFCGPGGYVDHMGYDLSLVRAPIEPIRKVLSAMRAKGYHIIHTREGHRPDLADLPANK
RWRSQRIKAGIGDAGPCGRILVRGEPGWEIIDALKPIQGETIIDKPGKGSFCATDLEL
ILNQKRIDNIVLTGITTDVCVHTTMREANDRGFECLLLEDCCGATDYGNHLAAIKMVK
MQGGVFGSVSNSATLVGQLP"
misc_feature complement(398675..399253)
/locus_tag="NGR_b03960"
/note="Isochorismatase family; Region: Isochorismatase;
pfam00857"
/db_xref="CDD:201475"
misc_feature complement(398702..399250)
/locus_tag="NGR_b03960"
/note="Cysteine hydrolases; This family contains
amidohydrolases, like CSHase (N-carbamoylsarcosine
amidohydrolase), involved in creatine metabolism and
nicotinamidase, converting nicotinamide to nicotinic acid
and ammonia in the pyridine nucleotide cycle. It...;
Region: cysteine_hydrolases; cd00431"
/db_xref="CDD:29548"
misc_feature complement(order(398816..398818,398915..398917,
399233..399235))
/locus_tag="NGR_b03960"
/note="catalytic triad [active]"
/db_xref="CDD:29548"
misc_feature complement(398828..398833)
/locus_tag="NGR_b03960"
/note="conserved cis-peptide bond; other site"
/db_xref="CDD:29548"
gene complement(399368..400294)
/locus_tag="NGR_b03970"
/db_xref="GeneID:7788137"
CDS complement(399368..400294)
/locus_tag="NGR_b03970"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_002822613.1"
/db_xref="GI:227818642"
/db_xref="GeneID:7788137"
/translation="MEATGIGVWGVPLAIFAGAIRVSTPFIFVSLGEAITERTGRINL
GLEGTLVFGAMTAYAVAVMTLSPWLGVLAAMAVGACFGLTHGFICKFRKVNDIAIGIA
MMQFGLGLAFFLGKPFIQPAAPKLPAIAFGAWSDLPPIQAVLNINVLFLIGAALALFL
WWAFRNTRVGLILRVVGDSSDAARAMGLNPDTVRLLATAAGGALAAIGGAYLSLYYPG
SWNEGISSGQGLMAVALVIFARWNPIGCFLAALLFGGAGALGPALQSVGVTKGYYLFY
AAPYVLTLVIMIATSSPTRSLAGAPGALSITK"
misc_feature complement(399434..400228)
/locus_tag="NGR_b03970"
/note="Transmembrane subunit (TM) of Treponema pallidum
(Tp) RbsC-1, RbsC-2 and related proteins. This is a
functionally uncharacterized subgroup of TMs which belong
to a larger group of TMs of Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette; Region:
TM_PBP1_transp_TpRbsC_like; cd06580"
/db_xref="CDD:119322"
misc_feature complement(399698..399754)
/locus_tag="NGR_b03970"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119322"
gene complement(400294..401424)
/locus_tag="NGR_b03980"
/db_xref="GeneID:7788138"
CDS complement(400294..401424)
/locus_tag="NGR_b03980"
/codon_start=1
/transl_table=11
/product="sugar ABC transporter permease"
/protein_id="YP_002822614.1"
/db_xref="GI:227818643"
/db_xref="GeneID:7788138"
/translation="MTLEANSHTLATLDGRVGSLRPFLEWLARRAEPLAITLFAIFVG
LALFSLFIALIGRSPIQLFELIYAGGFGTWFSVQNSLSRAAPLLLTALCVALPARLGL
VVIGAEGAVVLGGVAGAAIALPLVGDAPAPLVWLIMALAGMLVGAVWFGFAGFLRHYR
GVNETIASLLLAYIAIAVMNHLIEGPLRDPASLNKPSTAPLPPDYMLGSIPGTDLHWG
LVVGVMACILSWVLIEATSFGFAARIAGGNVRAAQIQGLPVGRLIVGFTALAGAFGGL
AGMIEVAAVQGSANASLAAGYGYTGILVAFLARHNPLAIIPVAVLLGGIDASGGLIQR
RMGLPDATVLVLQGTLFVVILFCETFYGRFKIFNPDLWKRSA"
misc_feature complement(400360..401175)
/locus_tag="NGR_b03980"
/note="Transmembrane subunit (TM) of Treponema pallidum
(Tp) RbsC-1, RbsC-2 and related proteins. This is a
functionally uncharacterized subgroup of TMs which belong
to a larger group of TMs of Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette; Region:
TM_PBP1_transp_TpRbsC_like; cd06580"
/db_xref="CDD:119322"
misc_feature complement(400621..400677)
/locus_tag="NGR_b03980"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119322"
gene complement(401439..402581)
/locus_tag="NGR_b03990"
/db_xref="GeneID:7788139"
CDS complement(401439..402581)
/locus_tag="NGR_b03990"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding
protein/surface lipoprotein Med"
/protein_id="YP_002822615.1"
/db_xref="GI:227818644"
/db_xref="GeneID:7788139"
/translation="MTKLLHASHAISRRAFLQSSAAGAAVASLAPGLLLSPAAAQSAL
TVGFIYVGPKDDYGYNQAHAEGAAAIKALPGVTVVEEENVPETVDVQKTMESMINLDG
ATLLFPTSFGYFDPHMLELAKKYPGIQFRHCGGLWQEGKHPGNTGSYFGYIGQGQYLN
GIAAGYATRSKKIGFVAAKPIPQVLQNINSFLLGARSVDPAITCQVIFTGEWSLAVKE
AEATNALIDQGADVVTCHVDSPKVVVETGAGRGAFICGYHANQSPLAPEKYLTGAEWA
WGNVYTDFVTKAQAGQKLGNFVRGGLKEGFVKMSPLGTAVTEEARKKFEATLAAIMAG
GFSVFKGSIRDNKGNVVVAVGQSFAENAIELESMDYLVEGVVGSTA"
misc_feature complement(401568..402446)
/locus_tag="NGR_b03990"
/note="Uncharacterized ABC-type transport system,
periplasmic component/surface lipoprotein [General
function prediction only]; Region: Med; COG1744"
/db_xref="CDD:31930"
misc_feature complement(401655..402446)
/locus_tag="NGR_b03990"
/note="Periplasmic binding domain of the basic membrane
lipoprotein Med in Bacillus and its close homologs from
other bacteria and Archaea; Region: PBP1_BmpA_Med_like;
cd06353"
/db_xref="CDD:107348"
misc_feature complement(order(401757..401759,401808..401810,
401946..401948,402030..402032,402180..402182,
402402..402404,402426..402431))
/locus_tag="NGR_b03990"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107348"
gene 402894..403598
/locus_tag="NGR_b04000"
/db_xref="GeneID:7788140"
CDS 402894..403598
/locus_tag="NGR_b04000"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_002822616.1"
/db_xref="GI:227818645"
/db_xref="GeneID:7788140"
/translation="MQIPMSNPRVKQPRRREIIRAGTTVDEMVRAIADMIVTGEMQPG
EKLDEFSLAARFEVSRTPVRESLRQLCAMGLVDRQPNRSAMVMNVTGEYLASMFEAMA
ELERICARLSAERMTVDERRALEKMHGDSMRLVHAGADDDYAAHNIEFHTRLYRGAHN
DHIFEMVTQTRARLAPFRRAQFRLPGRLAKSYKEHQGIVTAILRADAEEAAKAAYWHV
SNVSDASTVFVSRNKG"
misc_feature 402921..403505
/locus_tag="NGR_b04000"
/note="Transcriptional regulators [Transcription]; Region:
GntR; COG1802"
/db_xref="CDD:31987"
misc_feature 402978..403151
/locus_tag="NGR_b04000"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature order(403035..403037,403038..403043,403065..403079,
403083..403088,403095..403097,403125..403130,
403134..403145)
/locus_tag="NGR_b04000"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature 403182..403505
/locus_tag="NGR_b04000"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:203742"
gene 403742..405226
/locus_tag="NGR_b04010"
/db_xref="GeneID:7788141"
CDS 403742..405226
/locus_tag="NGR_b04010"
/codon_start=1
/transl_table=11
/product="UgpB, ABC-type sugar transport system,
periplasmic component UgpB"
/protein_id="YP_002822617.1"
/db_xref="GI:227818646"
/db_xref="GeneID:7788141"
/translation="MDAASQRRIALDVFSKVYITKHIAQHEGVRLGHVSNGEFSEADV
GRLCIWEEYMRKMTKALMGMSSALLLSTAIPGMAKADELTLCWAAWDPANALVELSKD
FTAQTGTAMKFEFVPWPNFADRILNELNSGGKLCDLLIGDSQWIGGSAENGYYVKLND
FFDKEGIKMGDFAEAAVNAYSTWPKGTPNYWALPAMGDANGWFYRKDWFAKPELQAEF
KQKYGRDLGPPQTWDELKQVAEFFTGREIDGQKVYGAAIFTERASEGITMGATSALYP
YGFKYQQTAGKYDMDGAVNSPDAVAGLEAYKALYKCCQPPGYTDSYMGEGLDAFKSGQ
VAMAMNWFAFFPGLYKDEKVGGERIGFFVNPKQKVAASTLGGQGISVVANTDNMDGAL
AYIKWFAQPEVQKKWWALGGYAVHNAVLNDPSFKASQPFAADFLVAMNQVQDFWQEPS
YAILLQAMQKRLHDYVVADQGTAQEALDALVNDWKEIFEDEGKL"
misc_feature 403898..405208
/locus_tag="NGR_b04010"
/note="ABC-type sugar transport system, periplasmic
component [Carbohydrate transport and metabolism]; Region:
UgpB; COG1653"
/db_xref="CDD:31839"
misc_feature 404024..404956
/locus_tag="NGR_b04010"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_1; pfam01547"
/db_xref="CDD:201851"
gene 405351..406277
/locus_tag="NGR_b04020"
/db_xref="GeneID:7788142"
CDS 405351..406277
/locus_tag="NGR_b04020"
/codon_start=1
/transl_table=11
/product="UgpA, ABC-type sugar transport systems, permease
component UgpA"
/protein_id="YP_002822618.1"
/db_xref="GI:227818647"
/db_xref="GeneID:7788142"
/translation="MLARATPSTIAVRVRGLSDRAIAWLFITPTIALLLAINIFPLIW
AVYLSFTNFRANRPNAEVEGVGLRNYQRVLNDADIWIAMQTTAHFVFWTILLQTVIGF
ALAYLIDRKFRGHAFWTTVILIPMMLSPAVVGNFWRFLYQPQIGLFNYIVSFFTGIPP
SSFEMLGSVNLAPWAIIIVDTWMWTPYVMLICLAGLRSIPDYIYEAAEVDRASAWRQF
WSITVPMALPFIMLAVLFRGIENFKMFDMVMLLTGGGPGSTTEVASITLKREAFESWL
TGRSSAFAIVLFVAVFGLANIYVKALNKVKQR"
misc_feature 405408..406274
/locus_tag="NGR_b04020"
/note="ABC-type spermidine/putrescine transport system,
permease component I [Amino acid transport and
metabolism]; Region: PotB; COG1176"
/db_xref="CDD:31369"
misc_feature 405618..406226
/locus_tag="NGR_b04020"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(405645..405650,405657..405662,405675..405677,
405702..405713,405717..405746,405753..405758,
405762..405764,405891..405896,405903..405905,
405909..405911,405918..405923,405927..405929,
405939..405944,405951..405953,406002..406004,
406044..406049,406056..406058,406077..406088,
406095..406100,406143..406148,406176..406181,
406188..406193,406197..406202,406209..406214,
406221..406226)
/locus_tag="NGR_b04020"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(405720..405764,406077..406094)
/locus_tag="NGR_b04020"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(405762..405764,405876..405878,406095..406097,
406137..406139,406146..406148,406176..406178)
/locus_tag="NGR_b04020"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(405954..405992,406008..406013,406023..406025)
/locus_tag="NGR_b04020"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 406274..407230
/locus_tag="NGR_b04030"
/db_xref="GeneID:7788143"
CDS 406274..407230
/locus_tag="NGR_b04030"
/codon_start=1
/transl_table=11
/product="UgpE, ABC-type sugar transport system, permease
component UgpE"
/protein_id="YP_002822619.1"
/db_xref="GI:227818648"
/db_xref="GeneID:7788143"
/translation="MSSVNTTAHSVVEPTPTVKRIAGAIVILYALITMVPLGWIFLTS
IKSPPDSISYPPKIVFTPTLEGYCNLFTTRTRQTPDYIQSLPPPTGTCDEITRGRNMV
IAGPSNYWPRFGNSLIIAFGSTFLAVSFGTLAAYGFSRFRVPLADDLLFFILSTRMMP
PIAVAIPIYLMYRQFGLSDTALGMILLYTAVNVSLAVWLLKGFIDEIPREYEEAAMID
GYTRLQAFWKVVLPQATTGIAATAIFCLIFAWNEYAFAVLLTSGSAQTAPPFIPTIIG
EGGQDWPAVAAGTTIFLVPILVFTIILRKQLLRGITFGAVRK"
misc_feature 406328..407224
/locus_tag="NGR_b04030"
/note="ABC-type sugar transport system, permease component
[Carbohydrate transport and metabolism]; Region: UgpE;
COG0395"
/db_xref="CDD:30744"
misc_feature 406610..407164
/locus_tag="NGR_b04030"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(406658..406663,406670..406675,406688..406690,
406718..406729,406733..406762,406769..406774,
406778..406780,406841..406846,406850..406852,
406856..406858,406865..406870,406874..406876,
406886..406891,406898..406900,406949..406951,
406991..406996,407003..407005,407024..407035,
407042..407047,407084..407089,407114..407119,
407126..407131,407135..407140,407147..407152,
407159..407164)
/locus_tag="NGR_b04030"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(406736..406780,407024..407041)
/locus_tag="NGR_b04030"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(406778..406780,406826..406828,407042..407044,
407078..407080,407087..407089,407114..407116)
/locus_tag="NGR_b04030"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(406901..406939,406955..406960,406970..406972)
/locus_tag="NGR_b04030"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 407227..407439
/locus_tag="NGR_b04040"
/db_xref="GeneID:7788144"
CDS 407227..407439
/locus_tag="NGR_b04040"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822620.1"
/db_xref="GI:227818649"
/db_xref="GeneID:7788144"
/translation="MTNPQEMTRATRQKRPVFLRRGPMENIATALIAAGFLMLFQPFL
LVLYTYSLAMLLTGTVMFIIVSKFPE"
gene 407443..408540
/locus_tag="NGR_b04050"
/db_xref="GeneID:7788145"
CDS 407443..408540
/locus_tag="NGR_b04050"
/codon_start=1
/transl_table=11
/product="MalK, ABC-type sugar transport systems, ATPase
component MalK"
/protein_id="YP_002822621.1"
/db_xref="GI:227818650"
/db_xref="GeneID:7788145"
/translation="MSEIKIVNLRKQFGDFIAVQDSSFTVEDGEFLALLGPSGCGKTT
TLRMIAGLELPTSGRIYLDGEDVTFNRASARDIAFVFQLFALYPHMNVRRNIGFPLLS
QGVPKAEIRARVEETARLLRIDHILDRSVSGLAGGDRQRVALGRAIIRRPKCFLMDEP
LGTLDAEFREVMVHELRELHNRIHATTVYVTHDQHEAMAMADKIAVMNHGVIEQYGTP
REIYDRPASMYVADFIGSPPMNFMRFHSGLNKGMRSIFLDDVEVAVPEVGEDVAPGEM
ALGIRPEHIRFSDQSPIRGAVYGSEYLGTNQIVAVETAVGIVKARVSADHSFRLGEAV
GLEFNPANIAVFDCVSGRAIASSLYAEARHG"
misc_feature 407443..408483
/locus_tag="NGR_b04050"
/note="ABC-type sugar transport systems, ATPase components
[Carbohydrate transport and metabolism]; Region: MalK;
COG3839"
/db_xref="CDD:33631"
misc_feature 407452..408090
/locus_tag="NGR_b04050"
/note="The N-terminal ATPase domain of the maltose
transporter, MalK. ATP binding cassette (ABC) proteins
function from bacteria to human, mediating the
translocation of substances into and out of cells or
organelles. ABC transporters contain two...; Region:
ABC_MalK_N; cd03301"
/db_xref="CDD:73060"
misc_feature 407548..407571
/locus_tag="NGR_b04050"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73060"
misc_feature order(407557..407562,407566..407574,407686..407688,
407914..407919,408016..408018)
/locus_tag="NGR_b04050"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73060"
misc_feature 407677..407688
/locus_tag="NGR_b04050"
/note="Q-loop/lid; other site"
/db_xref="CDD:73060"
misc_feature 407842..407871
/locus_tag="NGR_b04050"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73060"
misc_feature 407902..407919
/locus_tag="NGR_b04050"
/note="Walker B; other site"
/db_xref="CDD:73060"
misc_feature 407926..407937
/locus_tag="NGR_b04050"
/note="D-loop; other site"
/db_xref="CDD:73060"
misc_feature 408004..408024
/locus_tag="NGR_b04050"
/note="H-loop/switch region; other site"
/db_xref="CDD:73060"
misc_feature 408274..408480
/locus_tag="NGR_b04050"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:203932"
gene 408533..409540
/locus_tag="NGR_b04060"
/db_xref="GeneID:7788146"
CDS 408533..409540
/locus_tag="NGR_b04060"
/codon_start=1
/transl_table=11
/product="MalK, ABC-type sugar transport systems, ATPase
component MalK"
/protein_id="YP_002822622.1"
/db_xref="GI:227818651"
/db_xref="GeneID:7788146"
/translation="MAEVVLHGIGKTFGDTVAVDDLSLTVRDGEFVVLLGPTGAGKTT
TLRLIAGLERPDCGRIAIGGRDVGAHSPADRDVAFVFQQYSLYPHLSVYDNLAFPLRS
PARRLGAEEIDRRVREVARMVRIEHKLQNRSTRLSGGEMQRVAIGRALVRRPAIYLMD
EPLSSLDAKLRAELRLELKRIQKELSSTLLYVTHDQVEAMTMADRIGILSEGKLVQIG
TPREIYADPANLHVAARLGQPHINLLPIDLLPGATPPSGALTIGARTEHLEIATNARG
NAEVDWIEHLGDQNHLHIRVKGHKLVTLADPHLSIKPGDQISLTLRQPLYFGSEGERL
R"
misc_feature 408533..409498
/locus_tag="NGR_b04060"
/note="ABC-type sugar transport systems, ATPase components
[Carbohydrate transport and metabolism]; Region: MalK;
COG3839"
/db_xref="CDD:33631"
misc_feature 408542..409186
/locus_tag="NGR_b04060"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 408638..408661
/locus_tag="NGR_b04060"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(408647..408652,408656..408664,408776..408778,
409010..409015,409112..409114)
/locus_tag="NGR_b04060"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 408767..408778
/locus_tag="NGR_b04060"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature 408938..408967
/locus_tag="NGR_b04060"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 408998..409015
/locus_tag="NGR_b04060"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 409022..409033
/locus_tag="NGR_b04060"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 409100..409120
/locus_tag="NGR_b04060"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
misc_feature 409313..409498
/locus_tag="NGR_b04060"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:203932"
gene 409573..411216
/locus_tag="NGR_b04070"
/db_xref="GeneID:7788147"
CDS 409573..411216
/locus_tag="NGR_b04070"
/codon_start=1
/transl_table=11
/product="dihydroxyacetone kinase"
/protein_id="YP_002822623.1"
/db_xref="GI:227818652"
/db_xref="GeneID:7788147"
/translation="MSTMKHFFNRRENIVTEALDGLLQTAPAGSLARLDTYPDIKVVL
RGDWDKAKVAVISGGGAGHEPSHAGFVGRGMLTAAVSGEIFASPSVEAVLTAIRAATG
PKGCLLIVKNYTGDRLNFGLAAEKARVEGFRVEMVIVADDIALPDIVQPRGVAGTLFV
HKIAGHLAECGAGLETVAAAARSAARDIVSLGVSLSSCSIPGQAHAERLEADEGELGL
GIHGEPGVERIALQEARSIVATMSERLSRALRGGGGYALLINNLGAVPPIEMGLIAHT
VLSSSLAERVKLTIGPAPLMTALNMNGFSLSLMRLDGEREAALKAPVGPHAWVPAVER
HDVTVLPAIAALAKQPVPASHDPAADRLIAAICDHLLSLEAELNHLDARAGDGDTGST
VATGSRSVLAQIERLPLKDVAATLSSIGSILSTSMGGSSGVLLSIFFTAAAKAYLDTK
DMAGALLAGLERMTFYGGAGVGDRTMVDALDPALRALKAGGLAAAASAARAGADATRA
MKKAKAGRASYVGERDLDGIPDPGAMAVAAVFEVAAGLR"
misc_feature 409582..410556
/locus_tag="NGR_b04070"
/note="dihydroxyacetone kinase subunit DhaK; Provisional;
Region: PRK14481; cl10557"
/db_xref="CDD:212308"
misc_feature 409585..411168
/locus_tag="NGR_b04070"
/note="dihydroxyacetone kinase, ATP-dependent; Region:
dak_ATP; TIGR02361"
/db_xref="CDD:211737"
misc_feature 410722..411168
/locus_tag="NGR_b04070"
/note="DAK2 domain; Region: Dak2; pfam02734"
/db_xref="CDD:202366"
gene 411352..411975
/locus_tag="NGR_b04080"
/db_xref="GeneID:7788148"
CDS 411352..411975
/locus_tag="NGR_b04080"
/codon_start=1
/transl_table=11
/product="phosphatase domain of the dihydroxyacetone
kinase family"
/protein_id="YP_002822624.1"
/db_xref="GI:227818653"
/db_xref="GeneID:7788148"
/translation="MLVVLANAALIGGLIEVCREAIAANADHLSELDRAIGDGDHGIN
MRRGLEAVYAERNRLAELALPKALEEIGLTLVMSVGGAAGPLYGTLLIAIGRQLGGAN
GQQDFARALEHAIDAVARRGRASPGDKTLLDVLYPVHAEVVRRAGLAGISEQAERAAS
LTFGMRAMRGRAAFLGDRSIGHVDPGAKSCALLTAAICRFLEEQCPA"
misc_feature 411382..411945
/locus_tag="NGR_b04080"
/note="DAK2 domain; Region: Dak2; cl03685"
/db_xref="CDD:207998"
gene 411963..412370
/locus_tag="NGR_b04090"
/db_xref="GeneID:7788149"
CDS 411963..412370
/locus_tag="NGR_b04090"
/codon_start=1
/transl_table=11
/product="PTS system mannnose-specific transporter subunit
IIA"
/protein_id="YP_002822625.1"
/db_xref="GI:227818654"
/db_xref="GeneID:7788149"
/translation="MSGMIPKSANVGIVIVSHSPLVAEGAADMVRQMVGDCVPLAWSG
GNAVGGLGTHAAGILAAIERAWSDAGVAVFVDLGGAETNSEMAIEMLGEPRSGKVIIC
DAPLVEGAVMAAAEASGGAVLARVVATAQELSP"
misc_feature 411990..412367
/locus_tag="NGR_b04090"
/note="phosphotransferase mannnose-specific family
component IIA; Provisional; Region: PRK14484"
/db_xref="CDD:184702"
misc_feature order(412014..412016,412059..412064,412095..412097,
412203..412205)
/locus_tag="NGR_b04090"
/note="active pocket/dimerization site"
/db_xref="CDD:28890"
misc_feature order(412014..412016,412188..412190,412203..412205)
/locus_tag="NGR_b04090"
/note="active site"
/db_xref="CDD:28890"
misc_feature 412014..412016
/locus_tag="NGR_b04090"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:28890"
gene 412370..412714
/locus_tag="NGR_b04100"
/db_xref="GeneID:7788150"
CDS 412370..412714
/locus_tag="NGR_b04100"
/note="HPr-like protei"
/codon_start=1
/transl_table=11
/product="histidine-containing phosphocarrier protein"
/protein_id="YP_002822626.1"
/db_xref="GI:227818655"
/db_xref="GeneID:7788150"
/translation="MDNRSRREAPEAVDTHGYYKAEIEVTHGFGLHARPSVIFTRLAK
SFPCSVEIEVNDSHVWLNGKSIVKIMGAKIRRGSMLKIRARGLRAAEAIHALKALVER
DFDEAKKHGRSA"
misc_feature 412433..412669
/locus_tag="NGR_b04100"
/note="Histidine-containing phosphocarrier protein
(HPr)-like proteins. HPr is a central component of the
bacterial phosphoenolpyruvate sugar phosphotransferase
system (PTS). The PTS catalyses the phosphorylation of
sugar substrates during their translocation...; Region:
PTS-HPr_like; cd00367"
/db_xref="CDD:29444"
misc_feature 412433..412444
/locus_tag="NGR_b04100"
/note="dimerization domain swap beta strand [polypeptide
binding]; other site"
/db_xref="CDD:29444"
misc_feature order(412460..412462,412466..412471,412475..412480,
412490..412492,412499..412501,412559..412570,
412577..412582)
/locus_tag="NGR_b04100"
/note="regulatory protein interface [polypeptide binding];
other site"
/db_xref="CDD:29444"
misc_feature 412463..412465
/locus_tag="NGR_b04100"
/note="active site"
/db_xref="CDD:29444"
misc_feature 412562..412564
/locus_tag="NGR_b04100"
/note="regulatory phosphorylation site [posttranslational
modification]; other site"
/db_xref="CDD:29444"
gene 412698..414311
/locus_tag="NGR_b04110"
/db_xref="GeneID:7788151"
CDS 412698..414311
/locus_tag="NGR_b04110"
/codon_start=1
/transl_table=11
/product="phosphoenolpyruvate protein kinase"
/protein_id="YP_002822627.1"
/db_xref="GI:227818656"
/db_xref="GeneID:7788151"
/translation="MAEALEIAGTAASPGVGLGPVHRATDVTAEVLALPDTVAAERDK
LRQAVATALAELQALADRSDEESAGILGFQIEMLLDPALAEMAEDRIVAGDGAALAWI
GALDEYIAGIKEAPDEQLRARAVDIVDIRNRVMSALTGRPLDGFAPGSVFVGKDLEPS
RFLAHDWTAGGGIVLFEGSVSSHVAMLARGRCVPMVVATGQFEVADGARVLIDANNGR
VVVAPDDSHVRQAKPARAEATPIAARRAGGVVETADGVAIRLSAIINDPAELKAVDPA
SFAGIGLMRTEFLVASPADAVDEQRHYDIYRQALEWAGDAPAIVRMLDLGGEKTLPGM
GDRKSESFLGLRGIRLLLARPALARAQVRALLRAAVHGDLGVLLPMVTVPDELDAMRT
YFEEERADLFRHGVETRMPEIGMMVEVPAAALMLERFSHSAFFSFGTNDLAQYLMAAA
RDDQSVAALYDAATSAVLRVIAQGVGHAEAMKKPIGICGEMASDPRHIPALMAAGLRH
FSVAPNRVTDIRSTIGGFYSDGRAAAEMK"
misc_feature 412713..414266
/locus_tag="NGR_b04110"
/note="Phosphoenolpyruvate-protein kinase (PTS system EI
component in bacteria) [Carbohydrate transport and
metabolism]; Region: PtsA; COG1080"
/db_xref="CDD:31278"
misc_feature 412716..413069
/locus_tag="NGR_b04110"
/note="PEP-utilising enzyme, N-terminal; Region:
PEP-utilisers_N; pfam05524"
/db_xref="CDD:203267"
misc_feature 413139..413345
/locus_tag="NGR_b04110"
/note="PEP-utilising enzyme, mobile domain; Region:
PEP-utilizers; pfam00391"
/db_xref="CDD:201201"
misc_feature 413451..414266
/locus_tag="NGR_b04110"
/note="Pyruvate kinase (PK): Large allosteric enzyme that
regulates glycolysis through binding of the substrate,
phosphoenolpyruvate, and one or more allosteric effectors.
Like other allosteric enzymes, PK has a high substrate
affinity R state and a low...; Region: Pyruvate_Kinase;
cl09155"
/db_xref="CDD:208991"
gene 414312..414722
/locus_tag="NGR_b04120"
/db_xref="GeneID:7788152"
CDS 414312..414722
/locus_tag="NGR_b04120"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822628.1"
/db_xref="GI:227818657"
/db_xref="GeneID:7788152"
/translation="MSRETVEDPIIAYKTILAQIIDNRPSGTRQRLAEALGKHRSFVT
QVTSPAYSTPLPARHLAAIFRVCHFSLGEQERFLQAYQSAHPGKLPDFGSAQKLRQLS
LIVPDLGDEKKNRLFDEAIAELVRNMAKLVGTMD"
gene 414838..415833
/locus_tag="NGR_b04130"
/db_xref="GeneID:7788153"
CDS 414838..415833
/locus_tag="NGR_b04130"
/note="with DhaL and DhaM forms dihydroxyacetone kinase,
which is responsible for phosphorylating dihydroxyacetone;
DhaK is the dihydroxyacetone binding subunit of the
dihydroxyacetone kinase"
/codon_start=1
/transl_table=11
/product="dihydroxyacetone kinase subunit DhaK"
/protein_id="YP_002822629.1"
/db_xref="GI:227818658"
/db_xref="GeneID:7788153"
/translation="MKKFMNRAETLVAESLAGLVSAHERLVTFGADGKFVRRRSLRPG
KVSLISGGGAGHEPMHVGFVGRGMLDAACTGHVFTSPTPDQIVAAIRETDRGEGCLLI
VKNYDGDVMNFEMAAELVAAEHRIATVVVRDDVDPGGSKRSQGRRGVAGTVVMEKLLG
AAAEAGWRLDELSALGESLNGRIRTMGVSLRGVTVPDTERETFVLPEDEMEIGVGIHG
EPGRARVKFATADEIVETMLEAILGELASERDENLLMFINGYGGTPASELYLVYNSAK
AQCERLGLTIARPLVGTYVTSLDMAGLSITVARLAERELSLWDAPVDTAALRWGG"
misc_feature 414838..415827
/locus_tag="NGR_b04130"
/note="dihydroxyacetone kinase subunit DhaK; Provisional;
Region: PRK14481"
/db_xref="CDD:184701"
misc_feature 414883..415827
/locus_tag="NGR_b04130"
/note="Dak1 domain; Region: Dak1; pfam02733"
/db_xref="CDD:202365"
gene complement(416595..418229)
/locus_tag="NGR_b04140"
/db_xref="GeneID:7788154"
CDS complement(416595..418229)
/locus_tag="NGR_b04140"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase"
/protein_id="YP_002822630.1"
/db_xref="GI:227818659"
/db_xref="GeneID:7788154"
/translation="MSLEGHLSDQKSLRAVTGNTANWAELAKDCIAFANAAGGTLKIG
IEDGHELPPAEQRVQSDLPDLLRRKLAERTVNVIGLPNIVTAINGGQYIELTVPRSLA
VASTTDGRYYLRVADQSKPVTGDDVMRLASERAALPWETQISLQIPRSELDAVKVDAI
VTGLRASDRVKSSVKEKTPNELLDHYLLAQGEYLTNLGVLCVGKQFRRAQLITAPVLQ
FIKFDDHGQKVNKIVWDDHALNPMELVEAVWQEVPDFKESYELPDGLFRQNVPAFDEV
VVRELLVNALVHRPYTQRGDIFLNLHPDRLEVVNPGLLPLGVTPQNVLHTTVRRNEHL
ARLFHDLKLMEREGSGYDKVYEVLLSQGRPAPELVEQHDRVQVTIRRRILKPEIIDFI
AKADDTYQLTQRERIALGLLAQHDALTARELAAQIELPSIDALQPWIKRLLEWQLVRS
AGRTQATRYFVDPEMLRRHDFIGGTTLKRIEPHRLFALIVEDVGRYPQSKIGDIHKRV
GSEIPRSRIRRSVEQLVKDGRLISSGIRSGTRYSIP"
misc_feature complement(417861..418157)
/locus_tag="NGR_b04140"
/note="Divergent AAA domain; Region: AAA_4; pfam04326"
/db_xref="CDD:202973"
misc_feature complement(416865..418154)
/locus_tag="NGR_b04140"
/note="Predicted transcriptional regulator containing an
HTH domain and an uncharacterized domain shared with the
mammalian protein Schlafen [Transcription]; Region:
COG2865"
/db_xref="CDD:32692"
misc_feature complement(417093..417347)
/locus_tag="NGR_b04140"
/note="ATP-dependent DNA helicase recG C-terminal; Region:
HATPase_c_4; pfam13749"
/db_xref="CDD:205923"
gene 418465..419052
/locus_tag="NGR_b04150"
/db_xref="GeneID:7788155"
CDS 418465..419052
/locus_tag="NGR_b04150"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822631.1"
/db_xref="GI:227818660"
/db_xref="GeneID:7788155"
/translation="MRHEFSEGDLAFRFTSHRLCLDFLSTIGEVGHRDIERIGTPTSY
SRWIAASGILDREPLVSVTDVEDAVEFRRILRSFFSDVTAEIRPPANVIRAINDTSRR
PIPWMELADDGYTVSRRAVAPAQAALASVARDALLLVSEGLLPRVKQCNDPTCNMFFL
DNSRGNNRIWCSTEGRGCGNKAKKRAFRKRHSEPS"
misc_feature 418510..418803
/locus_tag="NGR_b04150"
/note="Protein of unknown function (DUF1470); Region:
DUF1470; pfam07336"
/db_xref="CDD:203617"
misc_feature 418900..419037
/locus_tag="NGR_b04150"
/note="CGNR zinc finger; Region: zf-CGNR; pfam11706"
/db_xref="CDD:204712"
gene complement(419024..419752)
/locus_tag="NGR_b04160"
/db_xref="GeneID:7788156"
CDS complement(419024..419752)
/locus_tag="NGR_b04160"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_002822632.1"
/db_xref="GI:227818661"
/db_xref="GeneID:7788156"
/translation="MLAMDHQKQNNAALVRRTLRQRILRCELQPGERIVINDVCEEFG
VSLGAVREALSGLEGEGLLHAYAKRGFQVTGVSLEDMFDLTQARIEVECACLRLSIAQ
GDLAWESQVVAALYRLNGTPREQRGSDDEMSAAWSEAHANFHVALVAGCRNQTLLGIR
QTLFDRAERYRRLSIPVDADHRDVAAEHDALAQAALQRDPENACRLMETHLSRTAMLI
SEAAGRRLDGGGEEPIKMVPSDAS"
misc_feature complement(419090..419731)
/locus_tag="NGR_b04160"
/note="DNA-binding transcriptional regulator CsiR;
Provisional; Region: PRK11534"
/db_xref="CDD:183181"
misc_feature complement(<419600..419710)
/locus_tag="NGR_b04160"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
misc_feature complement(419114..419506)
/locus_tag="NGR_b04160"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:203742"
gene 419856..420731
/locus_tag="NGR_b04170"
/db_xref="GeneID:7788157"
CDS 419856..420731
/locus_tag="NGR_b04170"
/codon_start=1
/transl_table=11
/product="5-oxopent-3-ene-1,2,5-tricarboxylate
decarboxylase"
/protein_id="YP_002822633.1"
/db_xref="GI:227818662"
/db_xref="GeneID:7788157"
/translation="MRFLAYTQGNQTGVAVLSNGEWRGAADAGTTYAGSIQAWIEQGG
EALWLAGDRLSREPIVDLANVDLLPPILRPGKIVCVGLNYADHTEESGYKQPDHPTLF
PRFTSSLIAAGEPIVRPFVSETLDFEGELVAVIGRRGRHISKHDALDHVAGYSIFNDA
SIREFQHRTPQWTLGKNFDGTGSFGPWFVTADELPRGAAGLRIETRLNGEVVQASNTD
QLIFDVATLVSTISEAITLEPGDLIVTGTPSGIGHARNPRLYMRAGDVVEVEIQSIGT
LRNPVVDEPLQRAAS"
misc_feature 419949..420707
/locus_tag="NGR_b04170"
/note="4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase, C-terminal subunit; Region:
HpaG-C-term; TIGR02303"
/db_xref="CDD:131356"
misc_feature 420081..420701
/locus_tag="NGR_b04170"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; pfam01557"
/db_xref="CDD:201859"
gene 420756..421709
/locus_tag="NGR_b04180"
/db_xref="GeneID:7788158"
CDS 420756..421709
/locus_tag="NGR_b04180"
/note="dioxygenase domain"
/codon_start=1
/transl_table=11
/product="glyoxalase"
/protein_id="YP_002822634.1"
/db_xref="GI:227818663"
/db_xref="GeneID:7788158"
/translation="MTANRGQIGAEAVNGLLGAHSLDTFSFGVPDLDKAEEFHRAFGL
VTRERGGALELRTEGNDHVWARLTEGPKKALSYLSFGIYEEDLERFKRHLKSNGVLET
DAPPGLESNGIWLRDFEGTLVELKVAAKSSPDQKSHGVMNSSPAGIAGAPKRSAAGLV
MPSRMSHILLFTSDVDRAVDFYTRVLGLGLSDRAGSNIAFLHGRHGSDHHMVAFVRSH
APGIHHTSWDVPSVHHVGLGAMCMADRGFSQGWGVGRHVLGSNYFHYVRDPWGSYAEY
SCDMDFIPKNIDWSAADHDDEDAFYVWGPKPPADFGVNHEA"
misc_feature 420813..421148
/locus_tag="NGR_b04180"
/note="N-terminal domain of MhqB, a type I extradiol
dioxygenase, and similar proteins; Region: MhqB_like_N;
cd08344"
/db_xref="CDD:176692"
misc_feature 420840..421688
/locus_tag="NGR_b04180"
/note="3,4-dihydroxyphenylacetate 2,3-dioxygenase; Region:
HpaD; TIGR02295"
/db_xref="CDD:211729"
misc_feature 421239..421640
/locus_tag="NGR_b04180"
/note="This domain superfamily is found in a variety of
structurally related metalloproteins, including the type I
extradiol dioxygenases, glyoxalase I and a group of
antibiotic resistance proteins; Region: Glo_EDI_BRP_like;
cl14632"
/db_xref="CDD:211465"
misc_feature order(421254..421256,421266..421268,421347..421349,
421392..421394,421398..421400,421425..421427,
421548..421550,421572..421574,421578..421580)
/locus_tag="NGR_b04180"
/note="active site"
/db_xref="CDD:211348"
misc_feature order(421254..421256,421425..421427,421578..421580)
/locus_tag="NGR_b04180"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:211348"
gene 421741..422496
/locus_tag="NGR_b04190"
/db_xref="GeneID:7788159"
CDS 421741..422496
/locus_tag="NGR_b04190"
/EC_number="1.1.1.10"
/note="XR; Dicarbonyl/L-xylulosereductase"
/codon_start=1
/transl_table=11
/product="L-xylulose reductase"
/protein_id="YP_002822635.1"
/db_xref="GI:227818664"
/db_xref="GeneID:7788159"
/translation="MENRVEGAATAAPRPLIGKRIVLTGATGGLGRAMAVAFAAAGAD
VIPVARGGEALETLADELGSAPLAVDLTDPAVISSAMNGIGPVDVLVNNSGTNRPGPF
EAVTVQDFDLLVNLNLRGTFFATQSLLPHIRAGGAILNVGSQMGHVGAENRTVYCATK
HAIEGFTKALAIELAPRAIRVVSIAPTFIETPMTAPMFADPTFRSQVLTNIPMGRMGR
PEDVAAAAVFLASDAAGMITGTSLLIDGGWTAH"
misc_feature 421792..422484
/locus_tag="NGR_b04190"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature 421801..422475
/locus_tag="NGR_b04190"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(421813..421815,421819..421830,421885..421893,
421945..421953,422017..422025,422086..422088,
422161..422169,422206..422208,422218..422220,
422296..422307,422311..422316)
/locus_tag="NGR_b04190"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(422089..422091,422167..422169,422206..422208,
422218..422220)
/locus_tag="NGR_b04190"
/note="active site"
/db_xref="CDD:212491"
gene 422519..422995
/locus_tag="NGR_b04200"
/db_xref="GeneID:7788160"
CDS 422519..422995
/locus_tag="NGR_b04200"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822636.1"
/db_xref="GI:227818665"
/db_xref="GeneID:7788160"
/translation="MTCANRDRSSEPQRSTMSGDNPAFATLKRFYAAETVYLAPGGGD
FGPIAETLDPGCVLYQPATLPYGGEWRGPEGFRAWMEAFGRVWSHLEVRDPQFYPSGD
EVIVSRSHVHATVRATGQAVDWPLMQFFRVRNNRIVELRPFYWDTAALLAGIGGRS"
misc_feature 422597..422935
/locus_tag="NGR_b04200"
/note="SnoaL-like domain; Region: SnoaL_2; pfam12680"
/db_xref="CDD:205015"
gene 422992..423810
/locus_tag="NGR_b04210"
/db_xref="GeneID:7788161"
CDS 422992..423810
/locus_tag="NGR_b04210"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="YP_002822637.1"
/db_xref="GI:227818666"
/db_xref="GeneID:7788161"
/translation="MSKREVVIVTGASSGIGRATAVHLAEFGYDVGLTFGSNEAAGEE
TARRVRAAGGRAEVRQMSLGDPASIERALGGLIEAFRGVAAFVNNAGTLALASFTDIS
LADWRGVIDVNLTGSFLAGQLIARHMIETKTPGRIVNVSSVHEAVPLLGGAAYCTSKA
GIGMLTKCMALDLAPHGIRVNAVGPGETATPMIGVAEGEDIMGRRRPETPLGRPGTPG
EMAGAIAYLLAPEARFTTGTTLFVDGGLTLMAAIGNQRTIMESMRQGEVTNGNS"
misc_feature 422998..423735
/locus_tag="NGR_b04210"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 423001..423738
/locus_tag="NGR_b04210"
/note="oxidoreductase; Provisional; Region: PRK12743"
/db_xref="CDD:183715"
misc_feature order(423022..423024,423028..423033,423037..423039,
423094..423102,423256..423264,423409..423417,
423454..423456,423466..423468,423544..423555)
/locus_tag="NGR_b04210"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(423328..423330,423415..423417,423454..423456,
423466..423468)
/locus_tag="NGR_b04210"
/note="active site"
/db_xref="CDD:187535"
gene 423797..424537
/locus_tag="NGR_b04220"
/db_xref="GeneID:7788162"
CDS 423797..424537
/locus_tag="NGR_b04220"
/EC_number="1.1.1.-"
/note="2,5-DDOL dehydrogenase"
/codon_start=1
/transl_table=11
/product="2,5-dichloro-2,5-cyclohexadiene-1,4-diol
dehydrogenase"
/protein_id="YP_002822638.1"
/db_xref="GI:227818667"
/db_xref="GeneID:7788162"
/translation="MGILDGKTAIVTGGAGGVGSAVASLFAQEGAKVAVFDMKEDGPQ
GIDFYRKVDITDEGAVRAAVATVVEVLGLPDVLVNAAAIAGTGAPTHEATSEDFDRVF
AINVKGTFLCTKHVIAGLLATGRPGSIVNISSTYGVVGNADIPLYHGTKAAVRLLSKC
DAVTYAEKGIRSNAIILGSTRTDMTVAAMKASPEGEAYVRNLIAAHPMKRQAEPVEIA
RVIAFLASDLASFVTGADIPVDGGYTAQ"
misc_feature 423806..424534
/locus_tag="NGR_b04220"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 423806..424531
/locus_tag="NGR_b04220"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Provisional; Region: fabG; PRK05565"
/db_xref="CDD:180133"
misc_feature order(423833..423835,423839..423844,423848..423850,
423905..423913,424034..424042,424190..424198,
424235..424237,424247..424249,424325..424336)
/locus_tag="NGR_b04220"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(424109..424111,424196..424198,424235..424237,
424247..424249)
/locus_tag="NGR_b04220"
/note="active site"
/db_xref="CDD:187535"
gene 424566..425618
/locus_tag="NGR_b04230"
/db_xref="GeneID:7788163"
CDS 424566..425618
/locus_tag="NGR_b04230"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822639.1"
/db_xref="GI:227818668"
/db_xref="GeneID:7788163"
/translation="MKLRNYFAALLVSMAILPGSVRAQEVRIDVGDGITVPLKTEGPL
KIAFFSEGANNSAMQASIDGATRAATELGWQIDVFDGKFDAVTQLNQLQNALTRGYDA
WVLKAVEGNTMCEIATKDAPAKGIVVVISVLSICGRGANEGEALWSPGTLAYVGGAET
PKAFFQVLDRMGRENPGPQKLGVITGPELNPITKNHEAALRMFEAKYPDVEVVAVART
DYSTPSALEKAAPMVQANPDITLYYTAFSNLAKGLVPVLEQAGLIDKAKIYDNGATAW
AAGAIMEGAVKLSSANRLGSNAYNAVMAIDRARKGENLPRAIGDLGEPLVDGTPPTDP
YLIDSANVASYQPEVE"
misc_feature 424698..425513
/locus_tag="NGR_b04230"
/note="Periplasmic sugar-binding domain of active
transport systems that are members of the type I
periplasmic binding protein (PBP1) superfamily; Region:
PBP1_ABC_sugar_binding_like; cd01536"
/db_xref="CDD:107249"
misc_feature 424701..425504
/locus_tag="NGR_b04230"
/note="Periplasmic binding protein domain; Region:
Peripla_BP_4; pfam13407"
/db_xref="CDD:205585"
misc_feature order(424734..424736,424959..424961,425151..425153,
425379..425381,425439..425441)
/locus_tag="NGR_b04230"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107249"
gene 425615..426412
/locus_tag="NGR_b04240"
/db_xref="GeneID:7788164"
CDS 425615..426412
/locus_tag="NGR_b04240"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase"
/protein_id="YP_002822640.1"
/db_xref="GI:227818669"
/db_xref="GeneID:7788164"
/translation="MSTVGASIVYNVPVHSMMSLAGRRALVTGGSGGIGRAIVDEFLD
LGAAIGVTDLVAPEVDLASGAVFCAADITDETDVQRMFDTLTTSLDGAFDILVNCAAI
AGTGRPTHLASAEDFDHVFAVNVKGAFLCGGQFIARCLERDAEGVIVNVSSINGVIGS
ADIPLYHATKAALQLLSKCDAITYADRKIRSNCVLPGSTRTELTLRAQAESDDPDGYV
RRLVQAHPIGRQALPEEIARVVAFLASDASAFVTGADVAADGGYTAQ"
misc_feature 425666..426409
/locus_tag="NGR_b04240"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05557"
/db_xref="CDD:180126"
misc_feature 425687..426391
/locus_tag="NGR_b04240"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(425699..425701,425705..425716,425771..425776,
425822..425830,425909..425917,425981..425983,
426065..426073,426110..426112,426122..426124,
426200..426211,426215..426220)
/locus_tag="NGR_b04240"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(425984..425986,426071..426073,426110..426112,
426122..426124)
/locus_tag="NGR_b04240"
/note="active site"
/db_xref="CDD:212491"
gene 426434..427495
/locus_tag="NGR_b04250"
/db_xref="GeneID:7788165"
CDS 426434..427495
/locus_tag="NGR_b04250"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822641.1"
/db_xref="GI:227818670"
/db_xref="GeneID:7788165"
/translation="MRKFKSLKSSLSIASLLAALAAPAAAEDVSIDVGTDKPIVVQKG
ALKRIALFIEMGTNTAVQSTVTGAQEAAALHSITVDVFDARFDIGRQVNQMQNALIGG
YDAWIVAAIEGEQVCNMAASEAPKAGIPVAVVTMAICGRSINEGEAMWSPGTLTYIGG
NESPNSFERVMQQAVIDHPGPQKIAVLTGQPLHPITLAFDKALKKFLAENPQVTLAAT
HRTDYSPEMNQQKVQTTLQATPDLDAIIGVYTNMSKGAVPALEAAGLQGKIRLYEAGG
TVWSVDALKSGAIAATTGYYRGTAAETAVEMLVKAFNGEPVPRAVMNDGHALIPGQSP
GQVGIVTVANVDQYVPQSP"
misc_feature 426575..427390
/locus_tag="NGR_b04250"
/note="Periplasmic sugar-binding domain of active
transport systems that are members of the type I
periplasmic binding protein (PBP1) superfamily; Region:
PBP1_ABC_sugar_binding_like; cd01536"
/db_xref="CDD:107249"
misc_feature 426578..427381
/locus_tag="NGR_b04250"
/note="Periplasmic binding protein domain; Region:
Peripla_BP_4; pfam13407"
/db_xref="CDD:205585"
misc_feature order(426611..426613,426836..426838,427028..427030,
427256..427258,427316..427318)
/locus_tag="NGR_b04250"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107249"
gene 427503..427850
/locus_tag="NGR_b04260"
/db_xref="GeneID:7788166"
CDS 427503..427850
/locus_tag="NGR_b04260"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822642.1"
/db_xref="GI:227818671"
/db_xref="GeneID:7788166"
/translation="MTNTTDQIVLIVAFDPMPGRKEAFREHLFALVRAMSKEPHFVNT
IVHDDLNHADRLVLYEIWSGTRERWLREEPQKPYRKTYEEGLPGLLADRIVQWMVPVA
EWGSSLTAHIQGE"
misc_feature 427515..427781
/locus_tag="NGR_b04260"
/note="Antibiotic biosynthesis monooxygenase; Region: ABM;
cl10022"
/db_xref="CDD:209125"
gene 427852..428889
/locus_tag="NGR_b04270"
/db_xref="GeneID:7788167"
CDS 427852..428889
/locus_tag="NGR_b04270"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822643.1"
/db_xref="GI:227818672"
/db_xref="GeneID:7788167"
/translation="MKHAAIAAFLLAAGSASAEEIKVDVGLDKPVVIDTEQPLKLALF
IEIGTNSAVQSTITGVEKMAAKYGFSYDVFDARFDVARQINQMETALFNGYNAWIVVP
VEGSQVCDMVTKRAPAENVLVAHATGTACGRSSMEGEDLWSPGTLTYVGGNETPGAFK
AIMEKAAADNPGRQKVGILTGPNLHPITVSFDKALDEIKKEYPDFEVVALHRTDYSPP
DNQMKTQTMLQANPDLSIMVGAYTNMSKGAVPALEAAGKQGQVKVYEAGGTEWSVEAL
KSGAIQATTGFYRQTAAEAAAQAILDARAGKKVPRVILNDGHALIPGQEAGKVGLVTR
DNVAQYTPESP"
misc_feature 427969..428793
/locus_tag="NGR_b04270"
/note="Periplasmic sugar-binding domain of active
transport systems that are members of the type I
periplasmic binding protein (PBP1) superfamily; Region:
PBP1_ABC_sugar_binding_like; cd01536"
/db_xref="CDD:107249"
misc_feature order(428005..428007,428227..428229,428422..428424,
428650..428652,428710..428712)
/locus_tag="NGR_b04270"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107249"
misc_feature 428011..428703
/locus_tag="NGR_b04270"
/note="Periplasmic binding protein domain; Region:
Peripla_BP_4; pfam13407"
/db_xref="CDD:205585"
gene 428920..430458
/locus_tag="NGR_b04280"
/db_xref="GeneID:7788168"
CDS 428920..430458
/locus_tag="NGR_b04280"
/codon_start=1
/transl_table=11
/product="MglA, ABC-type sugar transport system, ATPase
component MglA"
/protein_id="YP_002822644.1"
/db_xref="GI:227818673"
/db_xref="GeneID:7788168"
/translation="MSTLAAQRPPAIRLRGVRKSFGMVEALKPVTLDVEAGKIHALVG
QNGAGKSTTLGILAGRIAASGGDIEIGGSRVELGDPRRARAAGVVAIYQELTIVPALS
AVANVFLGQTYARRGLLAEAAMRRRFHELTARLGVTISAEAEARSLSVADQQTLEILR
ALEANARIILFDEPTTALAPPEREALFKVMRDLRAAGHTLIYVSHNLDEVLDISDAIS
VFRNGRLIETRPRPDWTKSRLVAAMLGEDMGDIYHRRPAARPLGGPPALSVLGCSLPG
AIEGIGFSVRAGEVLGIGGLVGSGRSSLLRAVAGLEPQSSGSMEIGGKAVEWPRTPRA
ARRLGIALVPEDRKHQGLVLGLPAADNVTLPNFGAVAPFGLINNRYMTDRSAVATRAF
GFDPRRLAAPVGTLSGGNQQKVLLARWAYERPKILLVDEPTRGIDVGAKSEILNSLRA
FADQGLAVIIVSSELEEICALADRVVVLAEGRLVDHIDSNRAELSVHLVLNSAFGVER
HHHD"
misc_feature 428932..430434
/locus_tag="NGR_b04280"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:31325"
misc_feature 428953..429603
/locus_tag="NGR_b04280"
/note="This family represents the domain I of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses...; Region: ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:72975"
misc_feature 429049..429072
/locus_tag="NGR_b04280"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72975"
misc_feature order(429058..429063,429067..429075,429196..429198,
429433..429438,429532..429534)
/locus_tag="NGR_b04280"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72975"
misc_feature 429187..429198
/locus_tag="NGR_b04280"
/note="Q-loop/lid; other site"
/db_xref="CDD:72975"
misc_feature order(429220..429225,429283..429300,429328..429333)
/locus_tag="NGR_b04280"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72975"
misc_feature 429421..429438
/locus_tag="NGR_b04280"
/note="Walker B; other site"
/db_xref="CDD:72975"
misc_feature 429445..429456
/locus_tag="NGR_b04280"
/note="D-loop; other site"
/db_xref="CDD:72975"
misc_feature 429520..429540
/locus_tag="NGR_b04280"
/note="H-loop/switch region; other site"
/db_xref="CDD:72975"
misc_feature 429721..430368
/locus_tag="NGR_b04280"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene 430451..431431
/locus_tag="NGR_b04290"
/db_xref="GeneID:7788169"
CDS 430451..431431
/locus_tag="NGR_b04290"
/codon_start=1
/transl_table=11
/product="AraH, Ribose/xylose/arabinose/galactoside
ABC-type transport system, permease components AraH"
/protein_id="YP_002822645.1"
/db_xref="GI:227818674"
/db_xref="GeneID:7788169"
/translation="MTDSLAIAAQPIATGRRHFVDIALRYGLIIVLVVLVAVSQFLYP
RFLDPQNIKNILSQNAPLGIVAVGMTLVMITRGFDLSVGASYAAGATVFASLAVAGWS
LWWAGAVTLLIGLVAGLINGTIITRINVNPFVATLGTTSVFSGLALLYSNSSPFVVSD
KTFAMIGRGSFLDVPISIWILAAVLVVGELVLARTVYGRSLYAIGGNDEAARLAGLPT
AMLRTSTYVICGVCAALGGMIIASRLSIGQADIGTSMALDSIAVVVIGGTSLMGGEGS
VWRSAIGLMIVAVLTNLLDSLAVDSNYQLVIKGTIVVAAVALDAFARSRR"
misc_feature 430625..431407
/locus_tag="NGR_b04290"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature 431075..431131
/locus_tag="NGR_b04290"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene 431446..431811
/locus_tag="NGR_b04300"
/db_xref="GeneID:7788170"
CDS 431446..431811
/locus_tag="NGR_b04300"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822646.1"
/db_xref="GI:227818675"
/db_xref="GeneID:7788170"
/translation="MSRSPSTISPQASPSTGSSACGRRNGRNCPMAGCWSSCEGTAVE
LVWSNTTTRSVPLPLPDDLRRTGVKHVAFQSDNLDADLGRLADLGIRPVVGPSHSPYG
LRFVFLNDPAGNRVEIMGN"
misc_feature <431617..431799
/locus_tag="NGR_b04300"
/note="This domain superfamily is found in a variety of
structurally related metalloproteins, including the type I
extradiol dioxygenases, glyoxalase I and a group of
antibiotic resistance proteins; Region: Glo_EDI_BRP_like;
cd06587"
/db_xref="CDD:211348"
gene 431860..432240
/locus_tag="NGR_b04310"
/db_xref="GeneID:7788171"
CDS 431860..432240
/locus_tag="NGR_b04310"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822647.1"
/db_xref="GI:227818676"
/db_xref="GeneID:7788171"
/translation="MSKFLKSGKAADARAEDDAKVRATVEGILSDIERRGDLAVRDLS
EKFDRWSPENFRLSEQDIERLIGEVPAQDLAAIRFAQDQVRRFAEHQKAALRDVEVET
LPGVVLGHRNIPVNSVGCYAPGGK"
misc_feature 431860..>432237
/locus_tag="NGR_b04310"
/note="Histidinol dehydrogenase, HisD, E.C 1.1.1.23.
Histidinol dehydrogenase catalyzes the last two steps in
the L-histidine biosynthesis pathway, which is conserved
in bacteria, archaea, fungi, and plants. These last two
steps are (i) the NAD-dependent...; Region: Histidinol_dh;
cl10029"
/db_xref="CDD:199949"
misc_feature complement(432284..433410)
/note="potential frameshift: common BLAST hit:
gi|148656619|ref|YP_001276824.1| oxidoreductase
domain-containing protein"
gene complement(432284..432844)
/locus_tag="NGR_b04320"
/db_xref="GeneID:7788172"
CDS complement(432284..432844)
/locus_tag="NGR_b04320"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822648.1"
/db_xref="GI:227818677"
/db_xref="GeneID:7788172"
/translation="MTVYALHGMTGIFGPARAVTALSGVRIPERRFVERVIPTEADDN
TLLLLDFGSGLFAKVYGTAAGAVKHSLDFSGTYFGTQGKIEGLKLNGEYFDYPGREIA
VTAPDGGTQPGFGGNEWILPNVEGVHRTIGEQHVFADLMQLVDWVREGKRSVATAEHA
RHVVEIIEAAYKSAATGQRQTLQTSF"
misc_feature complement(432296..>432844)
/locus_tag="NGR_b04320"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
gene complement(433087..433410)
/locus_tag="NGR_b04330"
/db_xref="GeneID:7788173"
CDS complement(433087..433410)
/locus_tag="NGR_b04330"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822649.1"
/db_xref="GI:227818678"
/db_xref="GeneID:7788173"
/translation="MKAPLKFGVVGCETVSLRGLIPHLAQDDIADRVQLTALCDPISD
RVEHAAHEYGVPHAFSSFDDFLERGDVDAITIASPIGLHFEQGMKALNAGKHVHFNKT
MSVTT"
misc_feature complement(<433093..433401)
/locus_tag="NGR_b04330"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature complement(433093..433398)
/locus_tag="NGR_b04330"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
gene complement(433444..434181)
/gene="fabG1"
/locus_tag="NGR_b04340"
/db_xref="GeneID:7788174"
CDS complement(433444..434181)
/gene="fabG1"
/locus_tag="NGR_b04340"
/EC_number="1.1.1.100"
/note="3-ketoacyl-acyl carrier protein reductase"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP reductase"
/protein_id="YP_002822650.1"
/db_xref="GI:227818679"
/db_xref="GeneID:7788174"
/translation="MKVALVTGASRGLGAVMAQELASAGWAVAVNYASDTAGAESVAA
KIRDGGGRAHAARFSVIDQSEITRGIEEIKNSLGPVDLIVNNATGPQPEMPLMEQSWR
TYLDQLEFFVKAPLEMLQAVLPDWRERKAGRVINIGSEIAELGNPYFGNYASAKGAML
SMTRSWAKELAPEGITVNLVAPGWIPVERHAESPKERIDWYLDRTPAGHFGTPADIAH
MVVFLASEKADFITGQKLAVNGGRTLL"
misc_feature complement(433450..434178)
/gene="fabG1"
/locus_tag="NGR_b04340"
/note="putative beta-ketoacyl acyl carrier protein
[ACP]reductase (BKR), subgroup 2, classical (c) SDR;
Region: BKR_2_SDR_c; cd05349"
/db_xref="CDD:187607"
misc_feature complement(433459..434178)
/gene="fabG1"
/locus_tag="NGR_b04340"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05557"
/db_xref="CDD:180126"
misc_feature complement(order(433618..433623,433627..433638,
433714..433716,433726..433728,433765..433773,
433852..433854,433918..433926,434002..434010,
434080..434088,434143..434154,434158..434160))
/gene="fabG1"
/locus_tag="NGR_b04340"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187607"
misc_feature complement(order(433714..433716,433726..433728,
433765..433767,433849..433851))
/gene="fabG1"
/locus_tag="NGR_b04340"
/note="active site"
/db_xref="CDD:187607"
gene complement(434208..435215)
/gene="idhA1"
/locus_tag="NGR_b04350"
/db_xref="GeneID:7788175"
CDS complement(434208..435215)
/gene="idhA1"
/locus_tag="NGR_b04350"
/EC_number="1.1.1.18"
/codon_start=1
/transl_table=11
/product="myo-inositol 2-dehydrogenase"
/protein_id="YP_002822651.1"
/db_xref="GI:227818680"
/db_xref="GeneID:7788175"
/translation="MFTKQSHLRVAVFGAGRMGAIHAATLVRRSDACLAGIVDAHLPS
AERLAAEHGVRVLEEDAVFDDEDVDAVVIASAADSHPHLILRSVAARKAIFCEKPLAR
DLEAVQSVAKVVEATKLPFLLAFNRRFDPDFVALASRLRGGEIGAVELAILTSRDPSP
PPIDYVVKSGGVFRETTIHDIDVARWLTGEEPISVHATASALTTVAMKEAKLPDTVVV
TMTMPSGAIVSINNSWRAAYGYDQRVEVLGELGMLKLANRLQNGVTQMGASGTWKSNP
EPFFLERYANAYNAELDYFISALWEGRTISPGVADGVKALQIAYAAEQSARTGQTVTL
G"
misc_feature complement(434214..435194)
/gene="idhA1"
/locus_tag="NGR_b04350"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature complement(434841..435194)
/gene="idhA1"
/locus_tag="NGR_b04350"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature complement(434481..434795)
/gene="idhA1"
/locus_tag="NGR_b04350"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; pfam02894"
/db_xref="CDD:202453"
gene complement(435227..436228)
/locus_tag="NGR_b04360"
/db_xref="GeneID:7788176"
CDS complement(435227..436228)
/locus_tag="NGR_b04360"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter permease"
/protein_id="YP_002822652.1"
/db_xref="GI:227818681"
/db_xref="GeneID:7788176"
/translation="MNFIQMATSYNSRERKSEFKRISSRRLLRMLVVPLVTLLLICAV
ITFFQPRFLSLRALTAVATDAAPLLMLVVGSAVVILIGGIDLSVATMASFSAVLLVII
SPTTGDLGIVVVLSLAAFIGYLQGVIHHRAQIPSFVVSFGTLGVLYGTAHYITQATAA
PLGSSLIIPFLGAKTAGVPHGLVVAVLCAVGLSLTLRFTRLGRDLFAVGSSERAALVA
GVKVGPVKAIAFALSSFFAAGAGLMFLSQTGYSSPAMANNYLLPAIVGVVVGGNAISG
GVGGVGCALIGGLIAVMVRLGTVMLGLNPAFQNILFGIMVLVSVALTIDREKIGIIK"
misc_feature complement(435260..436036)
/locus_tag="NGR_b04360"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature complement(435536..435592)
/locus_tag="NGR_b04360"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene complement(436225..437742)
/locus_tag="NGR_b04370"
/db_xref="GeneID:7788177"
CDS complement(436225..437742)
/locus_tag="NGR_b04370"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter ATP-binding protein"
/protein_id="YP_002822653.1"
/db_xref="GI:227818682"
/db_xref="GeneID:7788177"
/translation="MSVLAARHVSKSYPGVRALADVSMELRENEILGLIGQNGSGKST
LLKIFTGVEQPTEGSLLLRGQQTIIRSPLAAAALGIGMVHQEQSLITNLTVAENIFFD
KHALGKRYGFYNWRSLNKAAERQLAKLECEIPPDLKVEKLSFPERQLVEFAKVLAVEE
LIDDQLVILFDEPTSLLSPSEIEGLFRQIRRLKERASIVFVSHRMDEVLEISDRVHVM
SNGENVAERTPSETDHKELYHLMVGSRRSEDYFLEERRRPTSAAPPRLETHRLSAPGA
FKDVSFAIRQGEILALTGVAGSGAEEFCRALFGLEEGVTGKIIFNGKEHPVDARPSDL
IAEGIGYVAAERKLEGVVTGRTIVDNIVLSFGSKLGKGLFIDRDREISSALHWIARLK
VKTPNAAEYVERLSGGNQQKVSLAKWLLSENLQLLILDHPTRGLDPGAKADLFEAIRD
LSDQGISILFVSETLEETLGMADTIVVMRDGQVSATFSDLFHAKPAPEAIVEAMV"
misc_feature complement(436231..437742)
/locus_tag="NGR_b04370"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:31325"
misc_feature complement(437050..437733)
/locus_tag="NGR_b04370"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(437614..437637)
/locus_tag="NGR_b04370"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(437134..437136,437227..437232,
437488..437490,437611..437619,437623..437628))
/locus_tag="NGR_b04370"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(437488..437499)
/locus_tag="NGR_b04370"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(437290..437319)
/locus_tag="NGR_b04370"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(437227..437244)
/locus_tag="NGR_b04370"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(437209..437220)
/locus_tag="NGR_b04370"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(437128..437148)
/locus_tag="NGR_b04370"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
misc_feature complement(436294..436959)
/locus_tag="NGR_b04370"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene complement(437739..438776)
/locus_tag="NGR_b04380"
/db_xref="GeneID:7788178"
CDS complement(437739..438776)
/locus_tag="NGR_b04380"
/codon_start=1
/transl_table=11
/product="Ribose/xylose/arabinose/galactoside ABC-type
transport system, permease components AraH"
/protein_id="YP_002822654.1"
/db_xref="GI:227818683"
/db_xref="GeneID:7788178"
/translation="MAQLPSTAASIAPRYDEGRLFSGTTEKAMKINIKELGPAFTLVV
LALAFSILSAQFFSMSNVQAILESAAIPVVLAVGITFIIVQGSIDLSIEGVMAASSMA
VALLIANSITTFDYGWLAIAAGPVFGLAFGLSNGLLYTYLRLPSLIVTLATWFIGLGV
ATLLFPGRQPEILDGRITMLAIYKPFGLSFLVCIAFVVATIGVVLQNYSQFGRMSFAI
GIDEKTTRLSGNSVRLHKILAFSFMGVLAGMGGAMISAQLAVGNPSAGQGFLFPTISA
AVIGGTLLSGGKGGVLHSVNGVLILEVLRNGMVQLGVDPYLRHVVEGIIIIAALVVGN
WQLRARTRVVK"
misc_feature complement(437781..438572)
/locus_tag="NGR_b04380"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature complement(438054..438110)
/locus_tag="NGR_b04380"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene complement(438790..439854)
/locus_tag="NGR_b04390"
/db_xref="GeneID:7788179"
CDS complement(438790..439854)
/locus_tag="NGR_b04390"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter ribose-binding protein"
/protein_id="YP_002822655.1"
/db_xref="GI:227818684"
/db_xref="GeneID:7788179"
/translation="MRKLTMALVSSVAALALAASAHANDVGDVYLGVGSASSEYWAAY
IEGAKAVASSLGKDVNVIPSEFDGQKLLEQFGAVFAAGCEDCVVTVDPASNAFTKAMI
ERADTAGAKYVNLWNRPDEIHPWDTVPNTWIANISFDGVDSGYQNGMALCNALGGKGN
IVALNGIPDNPPAKQRIAGLHKALQECPGLKLLDTQVGNWDQTQGQSITRAWLAKYGD
ELNGIFSANDGMALGAVAALREKGLVGKILVTGSDGSSDVIKLIEKGEMLSTMHIDGY
VQGAYAVALAAAAVKGDIKMDELKQDQRDFFLSQTLVTKDNAASVLNSKKDASQFSYD
ALKGNFWAASVGQIPAGANK"
misc_feature complement(439018..439770)
/locus_tag="NGR_b04390"
/note="Periplasmic sugar-binding domain of active
transport systems that are members of the type I
periplasmic binding protein (PBP1) superfamily; Region:
PBP1_ABC_sugar_binding_like; cd01536"
/db_xref="CDD:107249"
misc_feature complement(439018..439770)
/locus_tag="NGR_b04390"
/note="Periplasmic binding protein domain; Region:
Peripla_BP_4; pfam13407"
/db_xref="CDD:205585"
misc_feature complement(order(439036..439038,439096..439098,
439327..439329,439507..439509,439735..439737))
/locus_tag="NGR_b04390"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107249"
gene complement(440278..441351)
/locus_tag="NGR_b04400"
/db_xref="GeneID:7788180"
CDS complement(440278..441351)
/locus_tag="NGR_b04400"
/codon_start=1
/transl_table=11
/product="PurR family transcriptional regulator"
/protein_id="YP_002822656.1"
/db_xref="GI:227818685"
/db_xref="GeneID:7788180"
/translation="MDVSLSMARIWCYEVIASFHRLSEKLSMELRMKPTAKQVAHAAG
VSVAAVSRAFSPGAPIEAGKKKRILAAAEEIGYVSPARRTANVIAAGTITLVSGDLLN
PFYPTVVDTLAHSLQESGRQLIVYALPAHANVDLATDQVLASRPSAIIVTSAQLTSRM
TRACRQHQIKVVLLNRVQRDIRINAVACDNYQGGRDAGRILLDRGRRKIGFIGGIANT
STHAERLRGFRDVLAEAGLSIHAQTSGEFDYQRGYRAGETLMSANDPPDAIFCCNDIM
ALALIDVARQRGIRVPEDVAVVGFDDIPMASWNAYRLTTIRQPVERMVQEALSLIVDP
AIKPGDDGITRMFSGLLIRRDSA"
misc_feature complement(440332..441084)
/locus_tag="NGR_b04400"
/note="Periplasmic binding proteins and sugar binding
domain of LacI family; Region: Peripla_BP_1; pfam00532"
/db_xref="CDD:201285"
misc_feature complement(440284..441078)
/locus_tag="NGR_b04400"
/note="Ligand-binding domain of uncharacterized
DNA-binding regulatory proteins that are members of the
LacI-GalR family of bacterial transcription repressors;
Region: PBP1_LacI_like_2; cd06278"
/db_xref="CDD:107273"
misc_feature complement(order(440494..440499,440506..440508,
440518..440520,440602..440604,440917..440925,
440932..440934,440941..440943,440971..440973,
440977..440991,441010..441015,441019..441024,
441031..441039,441076..441078))
/locus_tag="NGR_b04400"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:107273"
misc_feature complement(order(440398..440400,440449..440451,
440611..440613,440680..440682,440788..440790,
440827..440829,440896..440898,441028..441030,
441037..441042))
/locus_tag="NGR_b04400"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107273"
gene 441350..442660
/locus_tag="NGR_b04410"
/db_xref="GeneID:7788181"
CDS 441350..442660
/locus_tag="NGR_b04410"
/note="catalyzes the oxidation of L-histidinol to
L-histidinaldehyde and then to L-histidine in histidine
biosynthesis; functions as a dimer"
/codon_start=1
/transl_table=11
/product="histidinol dehydrogenase"
/protein_id="YP_002822657.1"
/db_xref="GI:227818686"
/db_xref="GeneID:7788181"
/translation="MAITYLKRGKPEAARSEDDAKVRTTVEGILKDIETRGDAAVREL
SEKFDRYSPPSFRLSEGEIEVLMNKVSARDMEDIRFAQRQVRTFAQAQRDSMRNIEVE
TLPGVILGHRNIPVQSVGCYIPGGKFPMVASAHMSVATASVAGVPRIIAATPPFKGEP
NPAVIAAMKLGGAHEIYVMGGIQAIGAMAIGTETIKPVDMLVGPGNAFVAEAKRQLYG
RVGIDLFAGPTETMVIADDTVDAEICATDLLGQAEHGYNSPAVLLTNSRKLADATLVE
IDRLLSILPTADTARRSWEDYGEIIVCHTHKEMLEVANDIASEHVQVMTDRDDWYLQN
MHSYGALFLGARTNVANGDKVIGTNHTLPTKKAGRYTGGLWVGKYLKTHSYQKVLTDE
AAALIGAYGSRLCMLEGFVGHAEQCNVRVRRYGGRNVGYGQAAE"
misc_feature 441413..442588
/locus_tag="NGR_b04410"
/note="Histidinol dehydrogenase, HisD, E.C 1.1.1.23.
Histidinol dehydrogenase catalyzes the last two steps in
the L-histidine biosynthesis pathway, which is conserved
in bacteria, archaea, fungi, and plants. These last two
steps are (i) the NAD-dependent...; Region: Histidinol_dh;
cd06572"
/db_xref="CDD:119329"
misc_feature 441425..442594
/locus_tag="NGR_b04410"
/note="histidinol dehydrogenase; Region: hisD; TIGR00069"
/db_xref="CDD:161689"
misc_feature order(441491..441493,441713..441715,441719..441724,
441746..441748,441809..441811,441887..441892,
441896..441898,441959..441967,441971..441976,
442109..442111)
/locus_tag="NGR_b04410"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:119329"
misc_feature order(441566..441571,441578..441583,441587..441589,
441596..441601,441608..441613,441620..441625,
441650..441652,441656..441658,441668..441682,
441689..441691,441695..441697,441731..441745,
441944..441946,441989..441991,442001..442003,
442073..442078,442085..442090,442094..442102,
442106..442111,442319..442321,442334..442336,
442343..442348,442352..442378,442382..442384,
442388..442393,442397..442411,442415..442417,
442421..442423,442451..442456,442460..442474,
442478..442483,442490..442510,442514..442516,
442559..442564,442568..442588)
/locus_tag="NGR_b04410"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:119329"
misc_feature order(441737..441739,441743..441745,442034..442036,
442109..442111,442304..442309,442394..442396,
442406..442411,442427..442429,442571..442573,
442577..442579,442586..442588)
/locus_tag="NGR_b04410"
/note="product binding site; other site"
/db_xref="CDD:119329"
misc_feature order(441743..441745,442034..442036,442100..442102,
442109..442111,442304..442309,442394..442396,
442406..442411,442427..442429,442571..442573,
442577..442579,442586..442588)
/locus_tag="NGR_b04410"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119329"
misc_feature order(442100..442102,442109..442111,442406..442408,
442586..442588)
/locus_tag="NGR_b04410"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:119329"
misc_feature 442304..442309
/locus_tag="NGR_b04410"
/note="catalytic residues [active]"
/db_xref="CDD:119329"
gene complement(442669..443847)
/locus_tag="NGR_b04420"
/db_xref="GeneID:7788182"
CDS complement(442669..443847)
/locus_tag="NGR_b04420"
/codon_start=1
/transl_table=11
/product="transposase for insertion sequence NGRIS-14a"
/protein_id="YP_002822658.1"
/db_xref="GI:227818687"
/db_xref="GeneID:7788182"
/translation="MEIYVGIDVAKETHWACALDARAQVLLDRAVDNDQAAIERFVAD
LRGLGGDVVVGLDITGSLARFLEAILLAEGLRLVHVPGIAVNRAGQGFPGGESKSDPR
DARTIAELVRTRDLRPILPDDETAIALRLKVTRRRELSDDQTRRISRMRQLLGAIHPG
LERRLDLTAKGPLVLVTRYVTPTEIRRAGLKRLMAHLKRTPHLHAVEALAQRALEAAE
GQSIAVPGEASFADMIRELAAEALRAREAIARIDRDLEALLERHPDGALIRSLPGMGA
VLSAELIANIGTIERFHSADALASAAGLTPVIRQSGKSRNWRRAFGGDKALKRVFFQS
AFCAVSTRDPLSKAFYDRKRREGKHHTQAIIALARRRVTVLWTMLRTRQTFDPTQKAA
"
misc_feature complement(443401..443838)
/locus_tag="NGR_b04420"
/note="Transposase; Region: DEDD_Tnp_IS110; pfam01548"
/db_xref="CDD:201852"
misc_feature complement(442711..>443082)
/locus_tag="NGR_b04420"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3547"
/db_xref="CDD:33349"
misc_feature complement(442795..443052)
/locus_tag="NGR_b04420"
/note="Transposase IS116/IS110/IS902 family; Region:
Transposase_20; pfam02371"
/db_xref="CDD:202223"
gene 444068..444841
/locus_tag="NGR_b04430"
/db_xref="GeneID:7788183"
CDS 444068..444841
/locus_tag="NGR_b04430"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase"
/protein_id="YP_002822659.1"
/db_xref="GI:227818688"
/db_xref="GeneID:7788183"
/translation="MTSSALPRTPSFRLDGKTALVVGASSGIGQAAAVALAEAGANVT
LAARSIDKLERTVEALQHMELSATALALDVEDVEATELTIESGAAFDILVNSAGLACH
GPALETTIADFDTVMGINVRGAYFVTRAVARKLVATGRTGSLINISSQMAHVGGIDRA
VYSATKHAVEGFTKSMAIEWGMHGIRVNTICPTFIRTPLAERTFANPERVRWIEEKIK
LGRIGELEDIMGPVTFLASEAAAMITGSALMVDGGWTAD"
misc_feature 444098..444835
/locus_tag="NGR_b04430"
/note="short chain dehydrogenase; Provisional; Region:
PRK07060"
/db_xref="CDD:180817"
misc_feature 444101..444835
/locus_tag="NGR_b04430"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(444134..444136,444140..444145,444149..444151,
444206..444214,444353..444361,444506..444514,
444551..444553,444563..444565,444641..444652)
/locus_tag="NGR_b04430"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(444425..444427,444512..444514,444551..444553,
444563..444565)
/locus_tag="NGR_b04430"
/note="active site"
/db_xref="CDD:187535"
gene 444864..446438
/gene="pntA"
/locus_tag="NGR_b04440"
/db_xref="GeneID:7788184"
CDS 444864..446438
/gene="pntA"
/locus_tag="NGR_b04440"
/note="forms a tetramer composed of 2 alpha subunits and 2
beta subunits in the inner membrane; involved in
catalyzing transfer of hydride ion equivalents between NAD
and NADP; stereospecific (AB-specific); functions as a
proton pump by translocating protons from cytoplasm to
periplasm"
/codon_start=1
/transl_table=11
/product="NAD(P) transhydrogenase subunit alpha"
/protein_id="YP_002822660.1"
/db_xref="GI:227818689"
/db_xref="GeneID:7788184"
/translation="MKIATPSEVFGGEARVAMTPDSALHLQKLGYECLIETGAGKLAG
YSDDAYRAAGVKVVEDPSALYAAGDVIAKVRPPEPSEVAHLLPGQTLISFFYPAQNNE
LLELARSNGANIIAMDMVPRISRAQKMDALSSMANIAGYRAVIEAGSNFGRFFTGQVT
AAGKVPPAKVLIIGAGVAGLAAIGTATSLGAVTYAFDVRPEVAEQIESMGAEFVYLDF
PDQQQDGAATGGYAAPSSPEFREKQLAKFREMAPEIDIVITTALIPGRAAPKLWLADM
VAAMKPGSVVVDLAAERGGNCDLTVPDQKVVSANGVTVIGYTDFPSRMAAQASTLYAT
NVRHMVSDLTPAKDGVIVHNMDDDVIRGATVTKDGEITYPPPPPKIQAIAAQKPREKV
KELTPEEKRAAEVAAFKAQTKTQGILLFVATALLLVVGAVAPASFMGHFVVFVLSCFV
GFQVIWNVSHSLHTPLMAVTNAVSGIVILGALLQIGSGNWLVVTLAALSVLVATINIV
GGFLVTRRMLAMFQKS"
misc_feature 444864..446432
/gene="pntA"
/locus_tag="NGR_b04440"
/note="NAD(P) transhydrogenase subunit alpha; Provisional;
Region: pntA; PRK09424"
/db_xref="CDD:181844"
misc_feature 444879..445280
/gene="pntA"
/locus_tag="NGR_b04440"
/note="Alanine dehydrogenase/PNT, N-terminal domain;
Region: AlaDh_PNT_N; pfam05222"
/db_xref="CDD:203211"
misc_feature 445314..445811
/gene="pntA"
/locus_tag="NGR_b04440"
/note="Alanine dehydrogenase/PNT, C-terminal domain;
Region: AlaDh_PNT_C; smart01002"
/db_xref="CDD:198070"
misc_feature 446175..446432
/gene="pntA"
/locus_tag="NGR_b04440"
/note="Domain of unknown function (DUF3814); Region:
DUF3814; pfam12769"
/db_xref="CDD:205065"
gene 446455..447900
/locus_tag="NGR_b04450"
/db_xref="GeneID:7788185"
CDS 446455..447900
/locus_tag="NGR_b04450"
/codon_start=1
/transl_table=11
/product="NADP transhydrogenase subunit beta PntB"
/protein_id="YP_002822661.1"
/db_xref="GI:227818690"
/db_xref="GeneID:7788185"
/translation="MTIGIVSAAYISAAVLFILSLGGLSGQESAKRAVWYGIAGMALA
VVATVFGPMIDKSVGTWFIILLMIAGGSVLGTYVARRVQMTEMPQLVAALHSFVGLAA
VFIGFNAHIEAGQVAGMDEAARAALSGFAGILAHKTPVELAIMKVEVFLGVFIGAVTF
TGSVIAFGKLAGKVEGKAKKLPGGHFLNAGAVGLSLALLVLYFYGADVWALVAMTALA
FFIGYHLIMGIGGADMPVVVSMLNSYSGWAAAAIGFTLGNDLLIVTGALVGSSGAILS
YIMCKAMNRSFVSVIFGGFGATSGPQMQIAGEQIAIDTDGVAAALNDADSIIIVPGYG
MAVAQAQQSVSELTRKLRASGKTVRFAIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDE
INEDFPNTDVVIVVGSNDIVNPAAQEDPNSPIAGMPVLEVWKAKQVFVSKRGQGTGYS
GIENPLFYKDNARMFYGDAKKSIDLLLPTIV"
misc_feature 446455..447885
/locus_tag="NGR_b04450"
/note="NAD/NADP transhydrogenase beta subunit [Energy
production and conversion]; Region: PntB; cl00566"
/db_xref="CDD:199328"
misc_feature 446464..447885
/locus_tag="NGR_b04450"
/note="NAD(P) transhydrogenase beta subunit; Region: PNTB;
pfam02233"
/db_xref="CDD:145408"
gene complement(448029..449129)
/locus_tag="NGR_b04460"
/db_xref="GeneID:7788186"
CDS complement(448029..449129)
/locus_tag="NGR_b04460"
/codon_start=1
/transl_table=11
/product="transcriptional regulator PurR"
/protein_id="YP_002822662.1"
/db_xref="GI:227818691"
/db_xref="GeneID:7788186"
/translation="MLFSDSIRIQRIGRELKKSAKALDSGPSRKKYASSIDVARLAGV
SQSAVSRTFTEGASVSAKTREKVMKAADELGYGPSIIPKIMLTHKSSLIAIVSGGLYN
PFYAGVVEKLSHAVQKSGSNVMLFSVNHGEYIDEIIPDILSYRVDGIVSALSIVSAEA
AERCAKMHTPVVLFNNKLSNEWVASICSDNVEGGRQIAALFLKRGARRFAYIGGKKGN
LASEDRFAGYLSGLMQNGISDVAMAYGDFRHDEAFIAAKKLLSSRKPPDAIFCANDLM
AIGAMEAVKALGLSVPDDVLVAGFDDIPAAAWPSFDLTTVRQDGDAMIGRAMDQLARM
VDGEHLAGNSLHLIQAPLVERGSTAREPRKAE"
misc_feature complement(448044..449021)
/locus_tag="NGR_b04460"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:31797"
misc_feature complement(448893..449021)
/locus_tag="NGR_b04460"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature complement(order(448893..448895,448902..448904,
448941..448943,448950..448955,448968..448970,
448977..448982,448986..449000))
/locus_tag="NGR_b04460"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature complement(448059..448856)
/locus_tag="NGR_b04460"
/note="Ligand-binding domain of uncharacterized
DNA-binding regulatory proteins that are members of the
LacI-GalR family of bacterial transcription repressors;
Region: PBP1_LacI_like_2; cd06278"
/db_xref="CDD:107273"
misc_feature complement(order(448275..448277,448284..448286,
448296..448298,448380..448382,448695..448703,
448710..448712,448719..448721,448749..448751,
448755..448769,448788..448793,448797..448802,
448809..448817,448854..448856))
/locus_tag="NGR_b04460"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:107273"
misc_feature complement(order(448176..448178,448227..448229,
448389..448391,448458..448460,448566..448568,
448605..448607,448674..448676,448806..448808,
448815..448820))
/locus_tag="NGR_b04460"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107273"
gene 449203..450138
/locus_tag="NGR_b04470"
/db_xref="GeneID:7788187"
CDS 449203..450138
/locus_tag="NGR_b04470"
/codon_start=1
/transl_table=11
/product="sugar phosphate isomerase/epimerase IoIE"
/protein_id="YP_002822663.1"
/db_xref="GI:227818692"
/db_xref="GeneID:7788187"
/translation="MVARPANGPLENGGFPMHVKLANAPVSWGVDYADDAKNPPWPKI
MDEIAEAGYSYTELGPYGFYPTEPKRLASEFQSRGLTVEAGFVFQILHDPAKTDTVLD
NAARTVQLLSAVGGRYLVTIDHISEERMATAGRRDLAKKLSESQFEHMIGLIDRIADI
ALAAGVKPVVHQHAGCYIEFEDEIEGVLQRLDPERVGICIDTGHMAYAGIDPVAFYER
HAKRVQYFHFKDIDPEVHKRVLAEKVPFLAAVEQKIFCPMGVGVVDWEKLAKAFKTYG
YDGAANIEQDIDPTISFDPLGDARKSLAYLKSAGF"
misc_feature 449296..450126
/locus_tag="NGR_b04470"
/note="Sugar phosphate isomerases/epimerases [Carbohydrate
transport and metabolism]; Region: IolE; COG1082"
/db_xref="CDD:31279"
gene 450221..451114
/locus_tag="NGR_b04480"
/db_xref="GeneID:7788188"
CDS 450221..451114
/locus_tag="NGR_b04480"
/codon_start=1
/transl_table=11
/product="RbsB, ABC-type sugar transport system,
periplasmic component"
/protein_id="YP_002822664.1"
/db_xref="GI:227818693"
/db_xref="GeneID:7788188"
/translation="MSKKLKFYAVTHDILGDVFWEVFRRGLLDAAARFDVDVEHLRPG
KFSPEIQAGLIDGARHARPDGIISTVPDVAAVEGALKAAIADGIPVICVNAKDSRPEG
ERIPYLFYIGGDDFNAGELAGRYLLEHVKPRAAMCVDHYLYQHICHSDRWHGFKSAFD
KAGVPAERLRVPGGQPEECAEAVAKYMESNPNVDAVLTLGPPGAQAVLDAEAIVGAGR
TWKHLTFDVAQLQLDGIRSGRIMATIDSQQYLQGFLAVQHMWMHKTQGFTLAADIYTG
PAIVDLSNIDEAEQGVKAGTR"
misc_feature 450236..451060
/locus_tag="NGR_b04480"
/note="Periplasmic sugar-binding domain of uncharacterized
ABC-type transport systems; Region:
PBP1_ABC_sugar_binding_like_4; cd06312"
/db_xref="CDD:107307"
misc_feature 450266..451006
/locus_tag="NGR_b04480"
/note="Periplasmic binding protein domain; Region:
Peripla_BP_4; pfam13407"
/db_xref="CDD:205585"
misc_feature order(450275..450277,450500..450502,450671..450673,
450896..450898,450956..450958)
/locus_tag="NGR_b04480"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107307"
gene complement(451152..452024)
/locus_tag="NGR_b04490"
/db_xref="GeneID:7788189"
CDS complement(451152..452024)
/locus_tag="NGR_b04490"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822665.1"
/db_xref="GI:227818694"
/db_xref="GeneID:7788189"
/translation="MSLEPKLLLAAQTELGECPVWDPDRNTLFFMDIIGKKLHAYEWS
SGNDRVLELPALGGALALAKDGRLIAGLQNGIHMIEPESGAIEFVTDPEPNKPDHRLN
EGKCDPEGRFWIGSISTLGRFPSGCLYRLEKDGSVSEVLSEVSVPNTMAWLPDSKGMV
FADSVTKQVWRFQYDAGTGAISNREVFIDVSDFTGIPDGVAIDSEGGLWIAEFGGAAV
HHFSAEGKRIGRVILPATQVTSCVFAGPDLQHLVIITTKRLLDESGRKAQPHSGDLFV
VEPGVRGLQPHLFG"
misc_feature complement(451254..451982)
/locus_tag="NGR_b04490"
/note="SMP-30/Gluconolaconase/LRE-like region; Region:
SGL; pfam08450"
/db_xref="CDD:192042"
gene complement(452035..453912)
/locus_tag="NGR_b04500"
/db_xref="GeneID:7788190"
CDS complement(452035..453912)
/locus_tag="NGR_b04500"
/codon_start=1
/transl_table=11
/product="myo-inositol catabolism protein IolD"
/protein_id="YP_002822666.1"
/db_xref="GI:227818695"
/db_xref="GeneID:7788190"
/translation="MSSTIRLTAAQATIKYLQKQYSVFDGKRERLIGGIFGIFGHGNV
ASISQAIEEYGEELPYYQPKNEQAMVHAAMGYAKMKNRRATLACTASIGPGSTNMITG
AATATVNRIPVLLFASDTFAHRRTGNVLQQLEHPVDGDLTVNDCFRPISRFFDRISRP
EQILTALPEAMRVLTDPADTGAVTISFPQDVEGEAYDYPVEFFRERNWVIRRRDPSQD
DVNEAIAALSQAHAPLIIAGGGVRYSAAERALRDFANQFGIPVAETHAGKGVSLDTPL
CLGGMGVTGTGAAGRIAERADVVVAIGTRLQDFQTGSRSAFHAPNVTFVSINTNSYDA
HKLRGVPVVGDARLSIERIAAGLREAGYSTASTYRDEIKSRQREWKEAYRNDIAVPPG
GELNQGTIVRIVNESTRAGDVVIAAAGTPPGEIHKAWDNSNGSKAFLEFGFSTMGHEI
PAAIGARLANRSDEEIFVIIGDGTYLMGPTEIVTAVQENAKITVVVIENYGYQCIRDL
QENSTGIDNLGNEFRARDNDVLRPNGSYLEVDYAANARSMGAAVLSASDEEQFKDALA
KARDVRGPTVIVVKAEKRGRSIGSGVWWDVGASEVTNTKSVSDATTKFRAGERNQRYL
G"
misc_feature complement(452047..453912)
/locus_tag="NGR_b04500"
/note="Acetolactate synthase [Amino acid transport and
metabolism]; Region: COG3962"
/db_xref="CDD:33743"
misc_feature complement(453346..453753)
/locus_tag="NGR_b04500"
/note="Pyrimidine (PYR) binding domain of POX and related
proteins; Region: TPP_PYR_POX_like; cd07035"
/db_xref="CDD:132918"
misc_feature complement(order(453586..453591,453598..453600,
453610..453612,453631..453633,453673..453681,
453685..453690,453697..453702,453709..453711,
453718..453738))
/locus_tag="NGR_b04500"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132918"
misc_feature complement(order(453466..453468,453475..453477,
453601..453603,453610..453615,453619..453624,
453631..453633,453712..453714,453718..453729,
453733..453735))
/locus_tag="NGR_b04500"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132918"
misc_feature complement(order(453619..453621,453631..453633,
453715..453717))
/locus_tag="NGR_b04500"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132918"
misc_feature complement(452854..453255)
/locus_tag="NGR_b04500"
/note="Thiamine pyrophosphate enzyme, central domain;
Region: TPP_enzyme_M; pfam00205"
/db_xref="CDD:201080"
misc_feature complement(452104..452724)
/locus_tag="NGR_b04500"
/note="Thiamine pyrophosphate (TPP) family, IolD
subfamily, TPP-binding module; composed of proteins
similar to Rhizobium leguminosarum bv. viciae IolD. IolD
plays an important role in myo-inositol catabolism;
Region: TPP_IolD; cd02003"
/db_xref="CDD:48166"
misc_feature complement(order(452410..452412,452416..452418,
452491..452502,452575..452577))
/locus_tag="NGR_b04500"
/note="TPP-binding site; other site"
/db_xref="CDD:48166"
gene 454040..454813
/locus_tag="NGR_b04510"
/db_xref="GeneID:7788191"
CDS 454040..454813
/locus_tag="NGR_b04510"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase"
/protein_id="YP_002822667.1"
/db_xref="GI:227818696"
/db_xref="GeneID:7788191"
/translation="MEACFHGGRRKQAMQRFANKVALVTGASTGIGLETIKRIREEGG
TVFAAHRRGKIDIEGVASISLDVTDEGNWTRAISKVVSAAGRLDILINNAGVRESGSV
EETSLEQWRRLIDTNLTSIFLGCRAAVPAIRQAGGGAIVNVGSITGIRGTENMVAYSA
SKSGITSMTSSLALDLASDNIRVNAVCPAAIRTRMVTNWLNSSQDTDAAEAAVLAKHP
IGRIGRPDEVASVIAFLASDDSSFMTGMSIPVDGGRSIR"
misc_feature 454082..454810
/locus_tag="NGR_b04510"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Provisional; Region: fabG; PRK07231"
/db_xref="CDD:180897"
misc_feature 454082..454804
/locus_tag="NGR_b04510"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature order(454115..454117,454121..454126,454130..454132,
454187..454195,454316..454324,454466..454474,
454511..454513,454523..454525,454601..454612)
/locus_tag="NGR_b04510"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(454388..454390,454472..454474,454511..454513,
454523..454525)
/locus_tag="NGR_b04510"
/note="active site"
/db_xref="CDD:187535"
gene 454840..455982
/locus_tag="NGR_b04520"
/db_xref="GeneID:7788192"
CDS 454840..455982
/locus_tag="NGR_b04520"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="YP_002822668.1"
/db_xref="GI:227818697"
/db_xref="GeneID:7788192"
/translation="MEKIRFGIVGSGYMAKLHSLALRNIGAYLWPKLPRIEMVRMADI
VPEAAKEGAERWGWQSHTSDWKEVTRADDIDVVIIITPNDSHADIAIDAFSHGKHVFC
EKPLSNTVAEAERMTEAARASGKVNLVNFSYRTWPGIELARQLIREGELGEVLHFEGH
FFQDYAADPALPFSWRFDKPVSGGGAFGDIGSHIMDIASALMGPVESITAKTRRLYEK
RPVNGPDAKQVTVDDLTASLVQFSNGALGSVHASWAAAGHKSDLSFSVTGTKGALSFS
WERNNELHFFSAADPQRVGGFRRIMLGGIHPEADPFWYAQGQGLGYGEAFVVTARRAI
EAVIDANPNAAPNFAQALHINRVIAGAFQAAEEDRWVKIEKTSAFD"
misc_feature 454840..455961
/locus_tag="NGR_b04520"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature 454849..455232
/locus_tag="NGR_b04520"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature 455266..>455487
/locus_tag="NGR_b04520"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; pfam02894"
/db_xref="CDD:202453"
gene 456125..457111
/locus_tag="NGR_b04530"
/db_xref="GeneID:7788193"
CDS 456125..457111
/locus_tag="NGR_b04530"
/codon_start=1
/transl_table=11
/product="dehydrogenases MviM"
/protein_id="YP_002822669.1"
/db_xref="GI:227818698"
/db_xref="GeneID:7788193"
/translation="MAQYEVVIIGSGRIADVHAISVTRNPRMHLAGFVDPFDGAYFGE
KWSIPGFQTLAAAIDTCKPDALVIASPTETHVSYVLEACRFGLPTLCEKPVAFSREPI
LEAISAVASSNIPVILGFHRRFDAYRQEVHARVRAGDVGKVEHILQFSRDPRLAARSA
VLHQGNIVADMVVHDLDELNWFMGSLPERAYAQLDRNADPTLAEIGDFDTANIILSWE
GGAVAHVSATRRAAHAFEQRLEVFGGEGRIICEDPRISPVIFDSAKDTRISRRFEHFW
DRYRPAYQAEIDHLADILARGEAPLCTLEDGLRAYDLVQIVLSSVQAVTESK"
misc_feature 456125..457108
/locus_tag="NGR_b04530"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature 456140..456484
/locus_tag="NGR_b04530"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature 456527..456844
/locus_tag="NGR_b04530"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; cl11611"
/db_xref="CDD:209369"
gene 457212..458339
/locus_tag="NGR_b04540"
/db_xref="GeneID:7788194"
CDS 457212..458339
/locus_tag="NGR_b04540"
/codon_start=1
/transl_table=11
/product="dehydrogenases MviM"
/protein_id="YP_002822670.1"
/db_xref="GI:227818699"
/db_xref="GeneID:7788194"
/translation="MTGRNTVGVGMIGHAFMGKTHSIGYRDVAVIAPLDVPRPRLKAI
YGRDTARLEEARERYGWERAVSDWKEIIDDPDIQLVDNVGPNSIHVEPIIAAALAGKH
VYCEKPLAPDATQSFEMWKVAREAGVKHMCAFNYRFFPALQLARQMIQEGELGDIYHF
RSNFLVSSSLSENRVKSWRDDKTLAGSGVLGDLGSHHIDISRFLLSSDPVRATAVTGI
AVGKAGDQQRIETDDLFAALLTYENGALGVLEASRVAGGNMVTSRIEVDGSRGSIRFS
MQNLNELEYAGTDKIWRRINVLRDGDPYQKNWLPPGHPLGWVDTFSHEAMHMLAAIGG
LGEIAPIGATFRDGYYCAEVVDAIVRSAAEGATANVTYRNL"
misc_feature 457227..458321
/locus_tag="NGR_b04540"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature 457230..457613
/locus_tag="NGR_b04540"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature 457647..457988
/locus_tag="NGR_b04540"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; pfam02894"
/db_xref="CDD:202453"
gene 458349..459332
/locus_tag="NGR_b04550"
/db_xref="GeneID:7788195"
CDS 458349..459332
/locus_tag="NGR_b04550"
/codon_start=1
/transl_table=11
/product="D-isomer specific 2-hydroxyacid dehydrogenase"
/protein_id="YP_002822671.1"
/db_xref="GI:227818700"
/db_xref="GeneID:7788195"
/translation="MARVFISWPGYSPRDEDTGARLIAAGHELVLRPKRGNRTADELA
TLLEDCDAAIVSTDPFTREVLAGDRNLKVIARVGVGTDSIDHDAAKEFGVGISVTPGM
NAETVADQTLAMILGLMRRVVTQDQAVKAGRWDRVGEATPTELYRKTVGLIGAGIIGK
AVIRRLLGFGVRVLYFDAMVEKVHGAERCGSLDQLLGSSDIVSLHAPLLADTRELMNA
ARIALMPKGSYLINTSRGGLVQQPAVFAALRSGHLAGAALDVFEVEPPGAEALADVPN
LIASAHIGGISTESIARMTRSATTSVLSVLNGEIPDTVINPDALRERLAGA"
misc_feature 458385..459281
/locus_tag="NGR_b04550"
/note="Phosphoglycerate dehydrogenase and related
dehydrogenases [Amino acid transport and metabolism];
Region: SerA; COG0111"
/db_xref="CDD:30460"
misc_feature 458682..459200
/locus_tag="NGR_b04550"
/note="D-isomer specific 2-hydroxyacid dehydrogenase, NAD
binding domain; Region: 2-Hacid_dh_C; pfam02826"
/db_xref="CDD:202418"
gene 459335..460108
/locus_tag="NGR_b04560"
/db_xref="GeneID:7788196"
CDS 459335..460108
/locus_tag="NGR_b04560"
/codon_start=1
/transl_table=11
/product="4-hydroxy-2-oxovalerate aldolase"
/protein_id="YP_002822672.1"
/db_xref="GI:227818701"
/db_xref="GeneID:7788196"
/translation="MERTLTFKERTRARELTVGTWIKTPSRIVTEVLSGSAMDVLCLD
AEHAPFDRMDLDGAILSARAQDMPVLVRVQAPFPTEILNALDLGATGVVIPHVYDAAK
TRELVSSCLYAPGGRGYAGSSRAAGYTRVKMADHIMASNKMTTIIAQLEDAEVLSTLD
ELMAIEEIDCFFIGRADLAVGLGASSAVAPEVIDASTMICETAAKRGKAVGMFVPDLA
EIPRWNQLGVSLYLLESDQAFLINGASRLKHAVYQASGL"
misc_feature 459350..460075
/locus_tag="NGR_b04560"
/note="2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
[Carbohydrate transport and metabolism]; Region: HpcH;
COG3836"
/db_xref="CDD:33628"
misc_feature 459353..460042
/locus_tag="NGR_b04560"
/note="Pyruvate kinase (PK): Large allosteric enzyme that
regulates glycolysis through binding of the substrate,
phosphoenolpyruvate, and one or more allosteric effectors.
Like other allosteric enzymes, PK has a high substrate
affinity R state and a low...; Region: Pyruvate_Kinase;
cl09155"
/db_xref="CDD:208991"
gene complement(460349..460621)
/locus_tag="NGR_b04570"
/db_xref="GeneID:7788197"
CDS complement(460349..460621)
/locus_tag="NGR_b04570"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822673.1"
/db_xref="GI:227818702"
/db_xref="GeneID:7788197"
/translation="MYDLTGPPHPNFCPVHDPLPPTLKLAVASGSILEFTRPMGLIRP
WMAISMGRILAKQQGILDLAAQYKETAVKLGETQPHSVASFGSAFD"
gene complement(460879..461811)
/locus_tag="NGR_b04580"
/db_xref="GeneID:7788198"
CDS complement(460879..461811)
/locus_tag="NGR_b04580"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002822674.1"
/db_xref="GI:227818703"
/db_xref="GeneID:7788198"
/translation="MINKVRHRVLKLSLGDAELRLLRVFASVVQQGGFSAAQSALGMT
QATISTHMRHLEERLGLRLCSRGRSGFQLTDEGRLVYDAALELFGSLEKFQSRIGEAQ
GELTGNLSFGTVDAMITNRDLDLQGALAAFRATAPRVHLEIDVAAPQVLHQGLLNGSY
QIVLMPSVGSVAPHFRSHPVFSEVQKLYCAQGHPLYSRPDAELTDKLFEEQSFAGRTY
MLNETICGVNFSWAAATPHMEGTLLLLLSGAYIGFLPDHYADEWVRTGRLRMLAPERM
AFEDMFHIAYPRNKPSRAAETLALAITKSARKPH"
misc_feature complement(460927..461760)
/locus_tag="NGR_b04580"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(461578..461757)
/locus_tag="NGR_b04580"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(460918..461487)
/locus_tag="NGR_b04580"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cd05466"
/db_xref="CDD:176102"
misc_feature complement(order(461071..461076,461080..461085,
461101..461118,461377..461397,461401..461403,
461413..461415,461422..461427,461431..461436))
/locus_tag="NGR_b04580"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 461903..462880
/locus_tag="NGR_b04590"
/db_xref="GeneID:7788199"
CDS 461903..462880
/locus_tag="NGR_b04590"
/codon_start=1
/transl_table=11
/product="SpeB Arginase/agmatinase/formimionoglutamate
hydrolase SpeB"
/protein_id="YP_002822675.1"
/db_xref="GI:227818704"
/db_xref="GeneID:7788199"
/translation="MASNSYETGRLNLPFVGICTFGKNPYQPDWDAIDADVAILGAPF
DCGTQWRAGTRFGPRAIREASTLFSFGHRGAYDHEDDITYLPSGEVSIVDIGDADIVH
TDTMKSHANIEFGVRKILAAGALPVVLGGDHSVNIPCVNAFDEDCARKGPIHIVQIDA
HLDFVDERHGVRYGHGNPMRRAAEKPYVSGLSQLGIRNVSSTAKEGYEDARKMGSDIL
SVRQIRVLGTDAVVERVPAGARYYVTIDIDGFDPSIAPGTGTPSHGGFIYYEVLEILA
ALAKRGTVVGIDLVEVAPDYDHTGGTSILAAQVLMNLIGRVMHAKAKQR"
misc_feature 462011..462847
/locus_tag="NGR_b04590"
/note="Agmatinase and related proteins; Region:
Agmatinase_like_1; cd11589"
/db_xref="CDD:212537"
misc_feature order(462029..462031,462038..462040,462065..462070,
462077..462079,462086..462088,462182..462184,
462191..462196,462668..462670,462680..462682,
462692..462694,462704..462709,462803..462805,
462812..462817,462824..462826,462836..462838)
/locus_tag="NGR_b04590"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:212537"
misc_feature order(462299..462301,462377..462379,462383..462391,
462425..462430,462638..462640,462644..462646,
462773..462775)
/locus_tag="NGR_b04590"
/note="active site"
/db_xref="CDD:212537"
misc_feature order(462299..462301,462377..462379,462383..462385,
462389..462391,462638..462640,462644..462646)
/locus_tag="NGR_b04590"
/note="Mn binding site [ion binding]; other site"
/db_xref="CDD:212537"
gene 462970..464478
/locus_tag="NGR_b04600"
/db_xref="GeneID:7788200"
CDS 462970..464478
/locus_tag="NGR_b04600"
/codon_start=1
/transl_table=11
/product="aldehyde dehydrogenase"
/protein_id="YP_002822676.1"
/db_xref="GI:227818705"
/db_xref="GeneID:7788200"
/translation="MDESVRNYLDQYGVSDATRRFLAKPQKMFIDGAWSDSSNGATFD
IFEPSTGGLITRAPSGTPEDLDRAVRAARRQFDGGAWRRLKPLERERLLHSLADLIEA
HSDELAEIEAIDMGKSVTFAREIDIRGTVDTFRYFAGWASKLHGRTVEPSLPGNYLAY
TRKEPLGVVAAIVPWNFPLQTLAWKLAAALAVGCTAIVKPAELTSLSTLRFAELVQEA
GIPDGVVNIVTGKGSIIGAAMSTHPGINKVTFTGSTPVGQEVGRTAVGNLKHVTLELG
GKSPVLVLDDADLQSAAVAVANGVFFNSGQVCDAGTRVYVQGSVHDAFLDELVSVTSA
LKIAPGLDRDCYIGPLVSAQQKKVVSGYIEAGRREGAELIHGGASLHRQGHFIEPAIF
SHCKPQMSIVREEIFGPVLVTSPFDDLDDAVSLANDTPFGLAAAIYSNDLSRVHTLIP
RLHAGSIYVNAHSTIDPAMPFGGFKASGFGKDLGPEQLDYLMETKAVWITLP"
misc_feature 463042..464460
/locus_tag="NGR_b04600"
/note="NAD(P)+-dependent aldehyde dehydrogenase
superfamily; Region: ALDH-SF; cl11961"
/db_xref="CDD:213126"
misc_feature 463078..464460
/locus_tag="NGR_b04600"
/note="Aldehyde dehydrogenase family; Region: Aldedh;
pfam00171"
/db_xref="CDD:201055"
misc_feature order(463483..463497,463519..463521,463564..463566,
463570..463575,463717..463728,463735..463737,
463744..463749,463789..463797,463891..463893,
464182..464184,464188..464190,464266..464268,
464380..464382)
/locus_tag="NGR_b04600"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:143395"
misc_feature order(463495..463497,463789..463791,463882..463884,
463891..463893)
/locus_tag="NGR_b04600"
/note="catalytic residues [active]"
/db_xref="CDD:143395"
gene 464587..464754
/locus_tag="NGR_b04610"
/db_xref="GeneID:7788201"
CDS 464587..464754
/locus_tag="NGR_b04610"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822677.1"
/db_xref="GI:227818706"
/db_xref="GeneID:7788201"
/translation="MENDTAWQNELARRARIYEDIEAGHRFEGTMTVLDYAGMGALTL
VLVVAFWIWGA"
gene 464756..466219
/locus_tag="NGR_b04620"
/db_xref="GeneID:7788202"
CDS 464756..466219
/locus_tag="NGR_b04620"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822678.1"
/db_xref="GI:227818707"
/db_xref="GeneID:7788202"
/translation="MTDHVTHGGFAAIETERQEASRNRAAAERGDAPLLPYERLWGFW
EFTYANSALAIATWAFLIGGSVGLFVGPKEGIAAIVIGNIVGVMLTALATTPLSGRYG
IEQFVALRSQFGYNGSRVVYVLAVVVLTMGWLAVLAMMFGRSIDGLAALSAGEAANPT
GIKMIVAAVGAILVTWFVVARGPTSIKFFNMVVSPALVILMIVMLYLILQHRSFAELL
AMPALAPPFEDNTLNFIIAVEVNLAAGFSWWPYIGNLARLTKNERTAFWPNILGIFGA
AALGEIVGLLAAVALGDSDPTIWMTKIAGPVIGIIALLFVAFANMTSMANILYTSIVG
LRQVGTASVRAISWGTILFLFCVIPLGLVVFYPQMYDGFFIFLVWTSALNSALAGIGI
ADYFFLRGQKLDMRSLHGPQENGPYRFWGGFNPISLLALAAGFLVYVLVFNPQTLASL
PAFKYFTASVPSCLAAGTVHYVLTRLFARRRGWGLYP"
misc_feature <465515..466180
/locus_tag="NGR_b04620"
/note="Solute carrier families 5 and 6-like; solute
binding domain; Region: SLC5-6-like_sbd; cl00456"
/db_xref="CDD:212220"
misc_feature order(465710..465712,465719..465724)
/locus_tag="NGR_b04620"
/note="Na binding site [ion binding]; other site"
/db_xref="CDD:212031"
gene 466236..467921
/locus_tag="NGR_b04630"
/db_xref="GeneID:7788203"
CDS 466236..467921
/locus_tag="NGR_b04630"
/note="catalyzes the oxidation of choline to betaine
aldehyde and betain aldehyde to glycine betaine"
/codon_start=1
/transl_table=11
/product="choline dehydrogenase"
/protein_id="YP_002822679.1"
/db_xref="GI:227818708"
/db_xref="GeneID:7788203"
/translation="MTETYDYIIIGAGSAGCVLANRLSEDPAAKVLVLEYGGSDMSIF
IQMPTALSIPMNGTKYNWKYMTLPEPGLGGRRVHCPRGKVIGGSSSINGLVYMRGHAR
DFDEWEELGARGWRYANCLPYFQRAESWQDGGDAYRGASGPLATNAGNKMKNPLYRAF
VDAGREAGYITTEDPNGHMQEGFGAMHMTVKDGVRWSTANAYLKPAMSRPNLTVITHA
MTRRVVLEGKRAVGVEYELEGERVVAKASREVLISSGPIGSPHLLQRSGIGPAAVLRQ
AGVEVLHDLPGVGENLQDHSEVYIQYVCKEPITLNGKMGLLSRALIGAEWLLFQKGLS
VSNHFESGGFIRSDASLQWPDIQFHFLPAAMRYDGKKPLDGHGFMVLTGPNKPKSRGY
VRLRSAEAHEQPDILFNYLDREEDREGFRRCLRLTREIIAQPAFDRFRGEEIAPGANV
RSNDEIDAWVCETMESTYHPCGSCRMGEDAMAVVDSDLGVRGIAGLRVIDSSVFPSEP
NANLNAPTIMLAERASDIVRGKPLLAASNAEAGVAPGVGVTQRSGTPMRTVRH"
misc_feature 466236..467903
/locus_tag="NGR_b04630"
/note="choline dehydrogenase; Validated; Region: PRK02106"
/db_xref="CDD:179368"
misc_feature <466299..>466550
/locus_tag="NGR_b04630"
/note="SERine Proteinase INhibitors (serpins) exhibit
conformational polymorphism shifting from native to
cleaved, latent, delta, or polymorphic forms. Many
serpins, such as antitrypsin and antichymotrypsin,
function as serine protease inhibitors which regulate...;
Region: SERPIN; cl00137"
/db_xref="CDD:206855"
misc_feature 467394..467804
/locus_tag="NGR_b04630"
/note="GMC oxidoreductase; Region: GMC_oxred_C; pfam05199"
/db_xref="CDD:203202"
gene complement(468056..468376)
/locus_tag="NGR_b04640"
/db_xref="GeneID:7788204"
CDS complement(468056..468376)
/locus_tag="NGR_b04640"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822680.1"
/db_xref="GI:227818709"
/db_xref="GeneID:7788204"
/translation="MRSHSVKCAALFGSDLCVRAMPRMATLAGLARIDCSDSGLNAWL
EDDRGDRAVHRAVLDAGLQCYPLSDYTIATPRPDAIILGYAGVPADRMKPYVLRLAEA
IART"
misc_feature complement(468062..>468292)
/locus_tag="NGR_b04640"
/note="Transcriptional regulators containing a DNA-binding
HTH domain and an aminotransferase domain (MocR family)
and their eukaryotic orthologs [Transcription / Amino acid
transport and metabolism]; Region: ARO8; COG1167"
/db_xref="CDD:31361"
gene 468279..468590
/locus_tag="NGR_b04650"
/note="PilT protein domain protein may be truncated"
/pseudo
/db_xref="GeneID:7788205"
gene complement(468770..469153)
/locus_tag="NGR_b04660"
/db_xref="GeneID:7788206"
CDS complement(468770..469153)
/locus_tag="NGR_b04660"
/codon_start=1
/transl_table=11
/product="PilT protein-like protein"
/protein_id="YP_002822681.1"
/db_xref="GI:227818710"
/db_xref="GeneID:7788206"
/translation="MILADTSIWIDHFRHADSELRRIIEDDRLFCHPAVIGELALGSL
RDRSNVIAFLAAQREAFVATHDEVMMMIDRHAIFSMGIGYTDAHLMASVLLDQRAALW
TRDKRLRAAAERVGAPLHTPANARN"
misc_feature complement(468833..469153)
/locus_tag="NGR_b04660"
/note="Predicted nucleic acid-binding protein, contains
PIN domain [General function prediction only]; Region:
VapC; COG1487"
/db_xref="CDD:31676"
misc_feature complement(order(468839..468841,468896..468898,
469139..469141))
/locus_tag="NGR_b04660"
/note="putative active site [active]"
/db_xref="CDD:189022"
gene complement(469150..469350)
/locus_tag="NGR_b04670"
/db_xref="GeneID:7788207"
CDS complement(469150..469350)
/locus_tag="NGR_b04670"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822682.1"
/db_xref="GI:227818711"
/db_xref="GeneID:7788207"
/translation="MRSTINLDDTLLERARSLTGTKETAALVRQALETLVRVESGKRL
IALGGTMPDAEAAPRRRSAAAK"
misc_feature complement(469210..469350)
/locus_tag="NGR_b04670"
/note="Uncharacterized protein conserved in bacteria
(DUF2191); Region: DUF2191; pfam09957"
/db_xref="CDD:204355"
gene 469636..470271
/locus_tag="NGR_b04680"
/db_xref="GeneID:7788208"
CDS 469636..470271
/locus_tag="NGR_b04680"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822683.1"
/db_xref="GI:227818712"
/db_xref="GeneID:7788208"
/translation="MAYVDWAIKGPKIAACSCDYGCPCEFNGKPTEGLCEGLECMLIE
EGWFGDLRLDGLKVAAVYRWPGPVHEGGGVVRGFFDANADQAQIDALFTILGGKEQEP
TTVFNIYGSTIAQELEPIFAPIEFHSDIEKRTGGFRIDGHLELELEPIRNPVTGALHR
ARIVLPEGFEFREAEVASGTFTANGAIAMGRQKRYGALWRAAYGPYGIIEE"
misc_feature 469636..470256
/locus_tag="NGR_b04680"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG5588"
/db_xref="CDD:35147"
gene complement(470533..470889)
/locus_tag="NGR_b04690"
/db_xref="GeneID:7788209"
CDS complement(470533..470889)
/locus_tag="NGR_b04690"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002822684.1"
/db_xref="GI:227818713"
/db_xref="GeneID:7788209"
/translation="MNQLLFRMADFLSRPPGFYFVIVAMIASTALVPFGLTNVVTYAL
SVAAILITSVVLIQGYRDTAAIHAKLDEIIVSMRETRNEVVGLEHEQPEHIAAAVQRL
EAEAEEQGRANTETAR"
misc_feature complement(470539..470889)
/locus_tag="NGR_b04690"
/note="Predicted small integral membrane protein [Function
unknown]; Region: COG5478"
/db_xref="CDD:35037"
gene 471127..471936
/locus_tag="NGR_b04700"
/db_xref="GeneID:7788210"
CDS 471127..471936
/locus_tag="NGR_b04700"
/codon_start=1
/transl_table=11
/product="Ku78, Ku70 and Ku80 are 70kDa and 80kDa subunits
of the Lupus Ku autoantigen"
/protein_id="YP_002822685.1"
/db_xref="GI:227818714"
/db_xref="GeneID:7788210"
/translation="MAPRSFWKGYLKLSLVTCPVAMSPATTENEKVRFHTLNRKTSNR
VVSQYVDAVSGKPVSEDDEVKGYQRGEDDYVLLEDDELEAVGLESTRTIDIDMFVEAD
SIRWIWYDKPHYLVPDDPVGEEAFSVIRDAMASTGTVGISRLVMYRRERAVMLEPRGK
GIVLWTLRYGDEVRQPEEFFRNIGDDDNDPELMRLVTTLIEERSKPWNPDMVGDPVQD
RLLDIISAKKKGRKRVAKAKADEGERPSNVVNIMDALRKSISSEKTKKTKS"
misc_feature 471127..471894
/locus_tag="NGR_b04700"
/note="Ku-homolog [Replication, recombination, and
repair]; Region: COG1273"
/db_xref="CDD:31464"
misc_feature 471136..471894
/locus_tag="NGR_b04700"
/note="Ku-core domain, Ku-like subfamily; composed of
prokaryotic homologs of the eukaryotic DNA binding protein
Ku. The alignment includes the core domain shared by the
prokaryotic YkoV-like proteins and the eukaryotic Ku70 and
Ku80. The prokaryotic Ku...; Region: KU_like; cd00789"
/db_xref="CDD:63881"
misc_feature order(471139..471141,471196..471198,471226..471228,
471271..471273,471565..471567)
/locus_tag="NGR_b04700"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:63881"
misc_feature order(471175..471177,471196..471204,471208..471213,
471226..471237,471250..471252,471259..471270,
471274..471282,471298..471300,471310..471318,
471322..471324,471328..471333,471343..471348,
471355..471357,471412..471414,471418..471423,
471451..471453,471496..471498,471553..471555,
471634..471642,471646..471648,471733..471735,
471745..471747,471760..471768,471811..471813,
471892..471894)
/locus_tag="NGR_b04700"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:63881"
gene complement(472205..474757)
/locus_tag="NGR_b04710"
/db_xref="GeneID:7788211"
CDS complement(472205..474757)
/locus_tag="NGR_b04710"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA ligase"
/protein_id="YP_002822686.1"
/db_xref="GI:227818715"
/db_xref="GeneID:7788211"
/translation="MALEIYRKKRNFGSTPEPKGRKARRSGNSFVVQKHDATRLHYDF
RLEMDGVLKSWAVTKGPSLIPGEKRLAVHVEDHPLEYGDFEGTIPKGEYGGGTVILWD
RGTWSPIGDADRGYAKGHLDFELSGEKLGGRWHLVRMAGKPREKRENWLLIKGDDEAA
RSEDDPDILEERPESVLTGREIKDVAGEEPGWSSKIGRIRKKGRGTTKAASQQAERQA
VANVPDPAKIKGAKAAPLPDFVEPALATLVSSAPAGERWLHEIKFDGYRLQARIEAGR
VKLLTRGGLDWTKKFGKTLVSASQALPIGTALIDGEIVVETGSGASDFSALQADLSEG
RSDRFRFYVFDLLHLDGYDLRPLPLTKRKELLGQLIGEADGIIRFSNHFEEEGKLVLR
HACRLSLEGVVSKLRDAPYRTGRNKSWVKSKCSARQEFVVAGYVPSTTSRKAIGSLVL
GVYDAGKLHHVGRVGTGFTAALAEDLFKRLDRLRTTHSPFSARLSAEDARQVRYVKPE
LVAEIEFRAWTADGHLRHASFRGLREDKLASDIVREAPRSATAQPKPPQRTVKLTHPD
RLYWPDEGVTKEGLADYYAEVWRFIAPHIVGRPLALVRCPNGIAGEQFFQKHAWKGLN
PNIVLVNDPKEPPDEQLLSIRNLDGLTALVQSAVLEIHPWGSTVADWERPDTIIMDLD
PGDDVPFEAVIEAAFETADRLKAAGLVPFVKTSGGKGLHVVAPLKPKAEWPVAKAFTK
SIADAMASDSPDRFVSTITKSKRRGKILVDYLRNQRGATAVAAYSTRARPGAAVSMPL
SWDELAPGIGPAYFTVENTPTRLASLSTDPWGEFRAAAVPLAEPKVRRKKAA"
misc_feature complement(472241..474754)
/locus_tag="NGR_b04710"
/note="ATP-dependent DNA ligase; Reviewed; Region: ligD;
PRK05972"
/db_xref="CDD:180331"
misc_feature complement(474284..474751)
/locus_tag="NGR_b04710"
/note="DNA ligase D, 3'-phosphoesterase domain; Region:
LigD_PE_dom; TIGR02777"
/db_xref="CDD:131824"
misc_feature complement(473486..474040)
/locus_tag="NGR_b04710"
/note="Adenylation domain of Mycobacterium tuberculosis
LigD and LigC-like ATP-dependent DNA ligases; Region:
Adenylation_DNA_ligase_LigD_LigC; cd07906"
/db_xref="CDD:185715"
misc_feature complement(order(473495..473497,473501..473503,
473543..473545,473549..473551,473558..473560,
473726..473728,473786..473788,473822..473824,
473912..473914,473957..473965,473969..473980))
/locus_tag="NGR_b04710"
/note="active site"
/db_xref="CDD:185715"
misc_feature complement(order(473489..473491,473495..473497,
473558..473560,473768..473776,473783..473788,
473897..473899,473903..473905,473909..473917,
473957..473965,473972..473974))
/locus_tag="NGR_b04710"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:185715"
misc_feature complement(473135..473482)
/locus_tag="NGR_b04710"
/note="The Oligonucleotide/oligosaccharide binding
(OB)-fold domain of ATP-dependent DNA ligase LigD is a
DNA-binding module that is part of the catalytic core
unit; Region: OBF_DNA_ligase_LigD; cd07971"
/db_xref="CDD:153440"
misc_feature complement(order(473174..473176,473180..473185,
473189..473191,473348..473365,473369..473374,
473420..473422))
/locus_tag="NGR_b04710"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:153440"
misc_feature complement(472349..473029)
/locus_tag="NGR_b04710"
/note="PaeLigD_Pol_like: Polymerase (Pol) domain of
bacterial LigD proteins similar to Pseudomonas aeruginosa
(Pae) LigD. The LigD Pol domain belongs to the
archaeal/eukaryal primase (AEP) superfamily. In
prokaryotes, LigD along with Ku is required for...;
Region: PaeLigD_Pol_like; cd04862"
/db_xref="CDD:80312"
misc_feature complement(order(472391..472399,472421..472423,
472439..472441,472448..472450,472595..472597,
472601..472606,472613..472615,472712..472714,
472718..472720,472772..472774,472913..472915))
/locus_tag="NGR_b04710"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:80312"
gene complement(474761..475627)
/locus_tag="NGR_b04720"
/db_xref="GeneID:7788212"
CDS complement(474761..475627)
/locus_tag="NGR_b04720"
/codon_start=1
/transl_table=11
/product="Ku78, Ku70 and Ku80 are 70kDa and 80kDa subunits
of the Lupus Ku autoantigen"
/protein_id="YP_002822687.1"
/db_xref="GI:227818716"
/db_xref="GeneID:7788212"
/translation="MAPRANWKGYLKVAEVSCPVALYTAASTSERIAFHTINRATGNR
VHRQFVDSETGKPVEKDDQVKGYEVGSGDYVVLEPEEIAAAVPQSDKTLSVSAFIACG
DIDDVYFDKPYYLAPTKSHAEEAFALIREGMRKKKVAAIAQAVLFRRVRTLLIRAYED
GLIATTLNFDYEVRSAKDAFDEVPDLKIEGEMLELAEHIIKTKRGKFDPAKFDDRYEE
ALAELVKAKLEGKKIEPRKEPKRERVVDLMEALRQSAGVKAKKTNATTPTRKKATRAA
KTKEAAPRRKAS"
misc_feature complement(474860..475627)
/locus_tag="NGR_b04720"
/note="Ku-homolog [Replication, recombination, and
repair]; Region: COG1273"
/db_xref="CDD:31464"
misc_feature complement(474860..475618)
/locus_tag="NGR_b04720"
/note="Ku-core domain, Ku-like subfamily; composed of
prokaryotic homologs of the eukaryotic DNA binding protein
Ku. The alignment includes the core domain shared by the
prokaryotic YkoV-like proteins and the eukaryotic Ku70 and
Ku80. The prokaryotic Ku...; Region: KU_like; cd00789"
/db_xref="CDD:63881"
misc_feature complement(order(475187..475189,475481..475483,
475526..475528,475556..475558,475613..475615))
/locus_tag="NGR_b04720"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:63881"
misc_feature complement(order(474863..474865,474872..474874,
474947..474949,474986..474994,475007..475009,
475019..475021,475106..475108,475112..475120,
475199..475201,475256..475258,475301..475303,
475331..475336,475340..475342,475397..475399,
475406..475411,475421..475426,475430..475432,
475436..475444,475454..475456,475472..475480,
475484..475495,475502..475504,475517..475528,
475541..475549,475553..475558,475577..475579))
/locus_tag="NGR_b04720"
/note="putative homodimer interface [polypeptide binding];
other site"
