LOCUS NC_012691 3471292 bp DNA circular BCT 23-DEC-2012
DEFINITION Tolumonas auensis DSM 9187 chromosome, complete genome.
ACCESSION NC_012691
VERSION NC_012691.1 GI:237806776
DBLINK Project: 59395
BioProject: PRJNA59395
KEYWORDS .
SOURCE Tolumonas auensis DSM 9187
ORGANISM Tolumonas auensis DSM 9187
Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales;
Aeromonadaceae; Tolumonas.
REFERENCE 1 (bases 1 to 3471292)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Tice,H.,
Bruce,D., Goodwin,L., Pitluck,S., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
Mikhailova,N., Spring,S. and Beller,H.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Tolumonas auensis DSM 9187
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3471292)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (14-MAY-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3471292)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Tice,H.,
Bruce,D., Goodwin,L., Pitluck,S., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
Mikhailova,N., Spring,S. and Beller,H.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP001616.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4085314
Source DNA and organism available from DSMZ: DSM 9187
Contacts: Harry Beller (HRBeller@lbl.gov)
David Bruce (microbe@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Tolumonas auensis TA 4, DSM 9187
Culture Collection ID :: DSM 9187
GOLD Stamp ID :: Gi04053
Isolation Site :: freshwater mud
Oxygen Requirement :: Facultative
Temperature Range :: Mesophile
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Fresh water, Mud
##Metadata-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..3471292
/organism="Tolumonas auensis DSM 9187"
/mol_type="genomic DNA"
/strain="DSM 9187"
/isolation_source="sediment of freshwater lake"
/db_xref="taxon:595494"
/country="Switzerland"
/note="type strain of Tolumonas auensis"
gene 12..1397
/locus_tag="Tola_0001"
/db_xref="GeneID:7883396"
CDS 12..1397
/locus_tag="Tola_0001"
/inference="protein motif:TFAM:TIGR00362"
/note="KEGG: asa:ASA_0001 chromosomal replication
initiator protein DnaA;
TIGRFAM: chromosomal replication initiator protein DnaA;
PFAM: Chromosomal replication initiator DnaA; Chromosomal
replication initiator DnaA domain;
SMART: Chromosomal replication initiator DnaA domain; AAA
ATPase"
/codon_start=1
/transl_table=11
/product="chromosomal replication initiator protein DnaA"
/protein_id="YP_002891217.1"
/db_xref="GI:237806777"
/db_xref="InterPro:IPR001957"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013159"
/db_xref="InterPro:IPR013317"
/db_xref="GeneID:7883396"
/translation="MTASLWQQCLTRLQEELPSGEFGLWIRPLQAEFGDRSLTLYAAN
RFILDWVRDKYLLRINSLFTEICGADAPTLHFAVGRRPTAATVQMNTAAAPVADVRIG
PAITVPSWTSKQDAMPEINHKSNINETYTFENFVEGKSNQLALAAAHQVAENPGGAYN
PLFLYGGTGLGKTHLLHAVGNGIRARKPNAKVIYMQSERFVQDMVKALQNNAIQEFQR
YYRSVDALLIDDIQFFAKKERSQEEFFHTFNALLEGNQQIILTSDRYPKEIDGVEDRL
KSRFGWGLTIAIEPPELETRVAILMRKAEENKIHLPHEVAFFIAKRLRSNVRELEGAL
NRVIANARFTGKPINIDFVREALRDMLALQEKLVTIENIQKTVAEYYKIKVADLLSKR
RSRSVARPRQLAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIAELREESNDIKE
DYSNLIRTLSS"
misc_feature 12..1394
/locus_tag="Tola_0001"
/note="chromosomal replication initiation protein;
Reviewed; Region: dnaA; PRK00149"
/db_xref="CDD:178902"
misc_feature 18..206
/locus_tag="Tola_0001"
/note="DnaA N-terminal domain; Region: DnaA_N; pfam11638"
/db_xref="CDD:204696"
misc_feature 432..863
/locus_tag="Tola_0001"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 507..530
/locus_tag="Tola_0001"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(510..533,696..698,798..800)
/locus_tag="Tola_0001"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature <675..1085
/locus_tag="Tola_0001"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 684..701
/locus_tag="Tola_0001"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 834..836
/locus_tag="Tola_0001"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 1119..1388
/locus_tag="Tola_0001"
/note="C-terminal domain of bacterial DnaA proteins. The
DNA-binding C-terminal domain of DnaA contains a
helix-turn-helix motif that specifically interacts with
the DnaA box, a 9-mer motif that occurs repetitively in
the replication origin oriC. Multiple...; Region:
Bac_DnaA_C; cd06571"
/db_xref="CDD:119330"
misc_feature order(1188..1190,1212..1217,1236..1238,1254..1262,
1287..1301,1308..1310,1317..1322)
/locus_tag="Tola_0001"
/note="DnaA box-binding interface [nucleotide binding];
other site"
/db_xref="CDD:119330"
gene 1416..2519
/locus_tag="Tola_0002"
/db_xref="GeneID:7883559"
CDS 1416..2519
/locus_tag="Tola_0002"
/EC_number="2.7.7.7"
/inference="protein motif:TFAM:TIGR00663"
/note="KEGG: asa:ASA_0002 DNA polymerase III beta-subunit;
TIGRFAM: DNA polymerase III, beta subunit;
PFAM: DNA polymerase III beta chain;
SMART: DNA polymerase III beta chain"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit beta"
/protein_id="YP_002891218.1"
/db_xref="GI:237806778"
/db_xref="InterPro:IPR001001"
/db_xref="GeneID:7883559"
/translation="MQFSISRDSLLRPLQLVSGSIGGRPTLPILSNVLLNVTEQRLSL
TGTDLEVEMIGLVPLAGAVAVGSITTPARKLLDICRGLPDGAQLDFVLEGERLILRSG
RSRYSLSTLPAADYPNIEEWNSVLEFDISQQELKRLMEATQFSMASQDVRFYLNGMLF
ETSGQGLRTVGTDGHRLATCRREVLNEPQSDHQVILPRKGVLELARLLENDDRTIRLQ
IGLNNLRAEAEGFIFTSKLVDGRFPDYRRVFPRQSDKILIAERELLKQAFSRAAILSN
EKFRGVRLHLTTNLLHITANNPEQEEAEELIDVQYDGPELEVGFNVSYVLDVLNALKC
EQVKWYLTDANSSALVEDASNDDAQYVVMPMRL"
misc_feature 1416..2516
/locus_tag="Tola_0002"
/note="DNA polymerase III subunit beta; Validated; Region:
PRK05643"
/db_xref="CDD:180180"
misc_feature 1416..2513
/locus_tag="Tola_0002"
/note="Beta clamp domain. The beta subunit (processivity
factor) of DNA polymerase III holoenzyme, refered to as
the beta clamp, forms a ring shaped dimer that encircles
dsDNA (sliding clamp) in bacteria. The beta-clamp is
structurally similar to the trimeric...; Region:
beta_clamp; cd00140"
/db_xref="CDD:29053"
misc_feature order(1485..1487,1632..1634,1653..1655,2010..2012)
/locus_tag="Tola_0002"
/note="putative DNA binding surface [nucleotide binding];
other site"
/db_xref="CDD:29053"
misc_feature order(1635..1637,1644..1646,1722..1724,1728..1730,
2232..2234,2325..2330)
/locus_tag="Tola_0002"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29053"
misc_feature order(1929..1931,1935..1946,2376..2378,2502..2513)
/locus_tag="Tola_0002"
/note="beta-clamp/clamp loader binding surface; other
site"
/db_xref="CDD:29053"
misc_feature order(1929..1931,1935..1940,2157..2159,2262..2264,
2301..2306,2385..2387,2502..2513)
/locus_tag="Tola_0002"
/note="beta-clamp/translesion DNA polymerase binding
surface; other site"
/db_xref="CDD:29053"
gene 2525..3598
/locus_tag="Tola_0003"
/db_xref="GeneID:7883560"
CDS 2525..3598
/locus_tag="Tola_0003"
/inference="protein motif:TFAM:TIGR00611"
/note="TIGRFAM: DNA replication and repair protein RecF;
PFAM: SMC domain protein;
KEGG: aha:AHA_0003 DNA replication and repair protein
RecF"
/codon_start=1
/transl_table=11
/product="DNA replication and repair protein RecF"
/protein_id="YP_002891219.1"
/db_xref="GI:237806779"
/db_xref="InterPro:IPR001238"
/db_xref="InterPro:IPR003395"
/db_xref="GeneID:7883560"
/translation="MLHKLQIQHFRNLGQTEIYPSGGMNLLLGLNGSGKSSVLEAIHY
LSLGRSFRTHLTNRVIMQGEKAFTLFAQLELDEQSISIGLQKDRQGDTQLKIGGKSAD
KLAQLASLLPLQLIHPEGYNLLTGGPQQRRAFIDWGVFHVEQAFFPLWGKVRRLLKQR
NALLRQSSHYAPLAYWDQQLAEFSEALSVFRQQYCQALLPLVQQICQELLPEYTFQAT
FYAGWQQEQGLHLLLQEGFERDRQLGHTAIGPHRADLRLRAEGVPVQDLLSRGQLKLL
VCALRLAQGLYLRQNSEKTCLFLIDDFASELDAEKRYVLAKRLQQCESQVFITAIDQQ
PLQEMMQEFDCRLFHVKQGNITE"
misc_feature 2528..3595
/locus_tag="Tola_0003"
/note="recombination protein F; Reviewed; Region: recF;
PRK00064"
/db_xref="CDD:178835"
misc_feature 2528..>3019
/locus_tag="Tola_0003"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 2609..2632
/locus_tag="Tola_0003"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(2618..2623,2627..2635,2876..2878)
/locus_tag="Tola_0003"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 2867..2878
/locus_tag="Tola_0003"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature <3245..3592
/locus_tag="Tola_0003"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 3326..3355
/locus_tag="Tola_0003"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 3413..3430
/locus_tag="Tola_0003"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 3437..3448
/locus_tag="Tola_0003"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 3506..3526
/locus_tag="Tola_0003"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 3619..6036
/locus_tag="Tola_0004"
/db_xref="GeneID:7883561"
CDS 3619..6036
/locus_tag="Tola_0004"
/EC_number="5.99.1.3"
/inference="protein motif:TFAM:TIGR01059"
/note="KEGG: aha:AHA_0004 DNA gyrase, B subunit;
TIGRFAM: DNA gyrase, B subunit;
PFAM: DNA topoisomerase type IIA subunit B region 2 domain
protein; DNA gyrase subunit B domain protein; TOPRIM
domain protein; ATP-binding region ATPase domain protein;
SMART: DNA topoisomerase II; ATP-binding region ATPase
domain protein"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit B"
/protein_id="YP_002891220.1"
/db_xref="GI:237806780"
/db_xref="InterPro:IPR000565"
/db_xref="InterPro:IPR001241"
/db_xref="InterPro:IPR002288"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR006171"
/db_xref="InterPro:IPR011557"
/db_xref="InterPro:IPR013506"
/db_xref="GeneID:7883561"
/translation="MSENTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEV
MDNSIDETLAGHCTDIVARIHEDGSVSVRDNGRGIPVDMHKEEGRSAAEVIMTILHAG
GKFDDNSYKVSGGLHGVGVSVVNALSDKLLLTIQRNGNIYQQTYFLGEPDAPLAIIGT
CEGTGTEIRFWPSLSIFSDVTFRYEILARRFRELSFLNSGVSIRLIDERDGREDHFHY
EGGIRAFVEYLNQNKTPIHQKAFYFDLAREDGISVEVAMQWNDAYQENVYCFTNNIPQ
RDGGTHLAGFRSALTRTLNTYMDKEGYSKKAKTSASGDDAREGLTAVISVKVPDPKFS
SQTKDKLVSSEVKTAVEQAMGEKLDEYLLENPGEAKIIVGKIIDAARAREAARKAREM
TRRKGALDIAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKYQAILPLKGK
ILNVEKARFDKMISSQEVGTLITALGCGIGRDEYNPDKMRYHNVIIMTDADVDGAHIR
TLLLTFFYRQMPEIIERGYVYIAQPPLYKVKKGKQEQYIKDEESLLEYQTTLALDGAE
LYVNDSAPAISGAQLEKMVLEYRTAQHLITRLARRLPEAVLQQLLILPVLTTEALKDE
AQAKAWVAQLQHNLDEHGNNGSQYTLSVHRHAEHGVYLPQILLRQHGVEKHYQLGFEF
LNSPEYQQIVNIGQQITNLIEPTGFLKRGEKVRPVTSFEEALQILLDEGKRGLYIQRY
KGLGEMNPEQLWETTMDPMTRRMLQVTIEDGMAADQLFATLMGDNVEPRRAFIESNAL
KVANLDI"
misc_feature 3619..6033
/locus_tag="Tola_0004"
/note="DNA gyrase subunit B; Provisional; Region: gyrB;
PRK14939"
/db_xref="CDD:184903"
misc_feature 3727..>3876
/locus_tag="Tola_0004"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature 3757..3759
/locus_tag="Tola_0004"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(3844..3846,3850..3852)
/locus_tag="Tola_0004"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 4276..4752
/locus_tag="Tola_0004"
/note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
a ribosomal S5 domain 2-like fold, of the type found in
proteins of the type IIA family of DNA topoisomerases
similar to the B subunits of E. coli DNA gyrase and E.
coli Topoisomerase IV which are; Region:
TopoII_Trans_DNA_gyrase; cd00822"
/db_xref="CDD:48467"
misc_feature 4432..4434
/locus_tag="Tola_0004"
/note="anchoring element; other site"
/db_xref="CDD:48467"
misc_feature order(4606..4608,4615..4620,4624..4626)
/locus_tag="Tola_0004"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48467"
misc_feature order(4624..4626,4630..4632)
/locus_tag="Tola_0004"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:48467"
misc_feature 4873..5217
/locus_tag="Tola_0004"
/note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in proteins of the type IIA family of DNA topoisomerases
similar to the Escherichia coli GyrB subunit. TopoIIA
enzymes cut both strands of the...; Region:
TOPRIM_TopoIIA_GyrB; cd03366"
/db_xref="CDD:173786"
misc_feature order(4891..4896,4903..4905,5113..5115,5119..5121,
5125..5127)
/locus_tag="Tola_0004"
/note="active site"
/db_xref="CDD:173786"
misc_feature order(4891..4893,5113..5115)
/locus_tag="Tola_0004"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173786"
misc_feature <5197..5523
/locus_tag="Tola_0004"
/note="Type II secretion system (T2SS), protein M; Region:
T2SM; cl01222"
/db_xref="CDD:186390"
misc_feature 5806..6000
/locus_tag="Tola_0004"
/note="DNA gyrase B subunit, carboxyl terminus; Region:
DNA_gyraseB_C; pfam00986"
/db_xref="CDD:201537"
gene 6230..7243
/locus_tag="Tola_0005"
/db_xref="GeneID:7883562"
CDS 6230..7243
/locus_tag="Tola_0005"
/inference="protein motif:PFAM:PF01547"
/note="PFAM: extracellular solute-binding protein family
1;
KEGG: psa:PST_0371 spermidine/putrescine ABC transporter,
periplasmic spermidine/putrescine-binding protein,
putative"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein"
/protein_id="YP_002891221.1"
/db_xref="GI:237806781"
/db_xref="InterPro:IPR001188"
/db_xref="InterPro:IPR006059"
/db_xref="GeneID:7883562"
/translation="MRYWLSMLLLSLAGYCPASELVVYTWEYYLAPEVKSRFEQETGI
HIAEVNYNSDEARNRLLSGGYPPEFDIVSIDSLSLNDPVWRALFTVMPASIRKQNTAI
DPVFTARCGDLSVPYMWGSVGIAYRRSQVSEPITRWQQLFTPEPTLSGRIVMVDDTFD
LVSVALKAAGFSINTHNKSELQAAYHLLQKQRPSVATYQLSFAAVSDQQFGKRIAAAM
VYSGDFYALQQNSEYKDWTYVVPEEGSPLWLDCMSILKTSQHKAEAQRFLTFLTRPDI
ALLNGQTMGFTPALKKSYLPASMQNNAIIYPPVKQLQRSEFYNADVSKNELRSAIYFS
VLK"
misc_feature 6230..7240
/locus_tag="Tola_0005"
/note="spermidine/putrescine ABC transporter periplasmic
substrate-binding protein; Reviewed; Region: potD;
PRK09501"
/db_xref="CDD:181913"
misc_feature <6572..7060
/locus_tag="Tola_0005"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
gene 7240..9666
/locus_tag="Tola_0006"
/db_xref="GeneID:7883563"
CDS 7240..9666
/locus_tag="Tola_0006"
/inference="protein motif:TFAM:TIGR00254"
/note="KEGG: psp:PSPPH_4065 GGDEF domain/EAL
domain-containing protein;
TIGRFAM: diguanylate cyclase;
PFAM: EAL domain protein; GGDEF domain containing protein;
histidine kinase HAMP region domain protein;
SMART: EAL domain protein; GGDEF domain containing
protein"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase/phosphodiesterase with
extracellular sensor"
/protein_id="YP_002891222.1"
/db_xref="GI:237806782"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR001633"
/db_xref="InterPro:IPR003660"
/db_xref="GeneID:7883563"
/translation="MKGLHRKLLLTLLPVVILPLLALGLQSMMKLGDMANRNMELRLT
SLATTINEHLNGELRRNTVELAQLPNAEALISYLATKVTGTQKVYMGTRVQRMFHQLL
VGNKGFLQLSLLNSDNKELLRVGEGINPFHDIAPSNLIFMQYWAAQAAASDQFNSLMY
SPEMDEYVYKQGLRFIRSGPEISRDGEPVQRYSLILTYSLRKFGEMFLKQQVQQGIYL
LLLDKSNTFIAGEAPLGWRSGGPETDEISLPGGDYLVRRLPLADGLILQALIPQKLMT
AEATELRITTAIWLIISSLILLALLHVVLKRLILNPVSDLRNLMKQVATHEISEISLV
LAEDEMAELHNHFSGMLSQLEVSKRELERAAFIDPLTGIGNRSAFIRCLQNMVERHNE
QPFHFYLVQLKLHNLTWINNTFGAKTGDRALQLISRLLQQLLHEHILANAKCVCLARS
GSDEFIFSVPSYYPVDGNGQDTAALPDANAICELLAARFGQPVMLGSYSIKLRFSAGI
VRFPDIANGVEELMEGVSKARRLASRYQGNHWLQLDNEMVQHIREDRWLESELRQAIV
GQQCFVVYQPQYDIHSGHIVGAEALLRWRHPSYGMVPPDRFIPIAEVSGQIMDIDLWV
LDQACQCLGKLTAKGITDFRLAVNASGTELSNPAYPDAVRSTLLRYDIPPHRFGIEIT
ETAIVELDEVAQMTVRALKEIGVEIELDDFGTGYTSLSHLTNLQLDVLKIDRSYIMQL
ESNPKLVDSILQLADAFSLRVIAEGVETIEQLKLLQQKRCHMAQGFLLSKPITEEELI
ALLFDDSLAD"
misc_feature 8335..8808
/locus_tag="Tola_0006"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature order(8446..8448,8596..8598)
/locus_tag="Tola_0006"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(8461..8463,8470..8475,8485..8487,8497..8499,
8584..8586,8590..8601)
/locus_tag="Tola_0006"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(8551..8553,8689..8691)
/locus_tag="Tola_0006"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature 8914..9627
/locus_tag="Tola_0006"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene complement(9727..10968)
/gene="avtA"
/locus_tag="Tola_0007"
/db_xref="GeneID:7883564"
CDS complement(9727..10968)
/gene="avtA"
/locus_tag="Tola_0007"
/inference="protein motif:PFAM:PF00155"
/note="transaminase C; catalyzes transamination of
alanine, valine, and 2-aminobutyrate with their respective
2-keto acids; also catalyzes terminal step in valine
biosynthesis"
/codon_start=1
/transl_table=11
/product="valine--pyruvate transaminase"
/protein_id="YP_002891223.1"
/db_xref="GI:237806783"
/db_xref="InterPro:IPR004839"
/db_xref="GeneID:7883564"
/translation="MQFSQFGEKFTRLAGISQLMDDLNQGLKNPDAIMLGGGNPAAIP
EMVELFRQETALQLENGALLKAMLNYDGPQGHDGFRQALAELFRKEYGWDISADNIAL
TNGSQSAFFNLFNLLAGDYADGKKKKVLFPLAPEYIGYADGGLAEDQFVACKPHIDFL
ENGLFKYQVDFDALEVGDDIGMICVSRPTNPTGNVLTDEEIIKLDEIAQAKNIPLIID
NAYGTPFPHIIFSEVTPFWNQNTILCMSLSKLGLPGLRCGIVIANTAIINALSNISGI
INLAPSGIGPALMQRWVESGDILRHSADIIAPFYQQKAQQAVAWLQEAIPAPKLRIHK
PEGALFLWLWFEGLPVSCQELYEKLKQHGLIIVPGHYFFPGLPDKNWRHQYECIRLNY
AQPEEKVKQGIAILQQVINEL"
misc_feature complement(9730..10968)
/gene="avtA"
/locus_tag="Tola_0007"
/note="valine--pyruvate transaminase; Provisional; Region:
avtA; PRK09440"
/db_xref="CDD:181860"
misc_feature complement(9745..10872)
/gene="avtA"
/locus_tag="Tola_0007"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature complement(order(10201..10203,10222..10227,10231..10233,
10306..10308,10399..10401,10558..10560,10648..10656))
/gene="avtA"
/locus_tag="Tola_0007"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature complement(order(10105..10107,10114..10116,10201..10209,
10327..10329,10522..10524,10645..10647))
/gene="avtA"
/locus_tag="Tola_0007"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature complement(10222..10224)
/gene="avtA"
/locus_tag="Tola_0007"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene complement(11074..13146)
/locus_tag="Tola_0008"
/db_xref="GeneID:7883565"
CDS complement(11074..13146)
/locus_tag="Tola_0008"
/EC_number="6.1.1.14"
/inference="protein motif:TFAM:TIGR00211"
/note="KEGG: eck:EC55989_4013 glycine tRNA synthetase,
beta subunit;
TIGRFAM: glycyl-tRNA synthetase, beta subunit"
/codon_start=1
/transl_table=11
/product="glycyl-tRNA synthetase subunit beta"
/protein_id="YP_002891224.1"
/db_xref="GI:237806784"
/db_xref="InterPro:IPR002311"
/db_xref="InterPro:IPR006194"
/db_xref="InterPro:IPR008909"
/db_xref="InterPro:IPR015944"
/db_xref="GeneID:7883565"
/translation="MATENFLIELGTEELPPKALRKLAQAFADNFTAELDKAGLAHQG
VQWFAAPRRLALKVAALADKQADKQVEKRGPAVSAAFDAAGNPTPAAAGWAKSNGIEV
AQADRLATDKGEWLVYRANVAGQPTTGLLPAMAATALAGLPIPKPMRWGAKRTQFIRP
VHTLCMLFGAELVDGEILGLRSARIIRGHRFMGEAQFEISHADQYPALLLEKGKVQAD
YETRKAFIKAGAEAAAQQLGGIADIEESLLEEVTSLVEWPVILTATFEEKFLAVPAEA
LVHTMKGDQKYFPVYDNNGKLLPNFIFVSNIESKDPAQIIQGNERVVRPRLSDAEFFF
NTDKKHSLASRLESLDTVLFQQQLGTLKDKSVRIAEMSAFIAAQIGADVEHATRAGLL
SKCDLMTNMVMEFTDTQGVMGMHYARHDHEAEDVAVALNEQYMPRFAGDNLPNGLVAC
AVAIADKLDTLAGIFGIGQAPKGDKDPFALRRAAIGTLRIIVEKQLDLDLVDVVSKAA
ELYDGKISNKSVVDEVVDFMLGRFRASYQEAGIAVDVIQAVLARRPTRPADFDARVKA
VSHFRTLDAAEALAAANKRVSNILAKFDGKLKDSVDAALLQDPAEQVLAQQVAAMETK
LAPLFANGEYQLALTELAALREAVDTFFDKVMVMADDEALKLNRLTLLARLQALFLQA
ADISLLQQ"
misc_feature complement(11077..13140)
/locus_tag="Tola_0008"
/note="glycyl-tRNA synthetase subunit beta; Validated;
Region: glyS; PRK01233"
/db_xref="CDD:179258"
misc_feature complement(11290..11688)
/locus_tag="Tola_0008"
/note="YwpF-like protein; Region: YwpF; pfam14183"
/db_xref="CDD:206351"
misc_feature complement(<11161..11397)
/locus_tag="Tola_0008"
/note="Anticodon-binding domain of class Ia aminoacyl tRNA
synthetases and similar domains; Region:
Anticodon_Ia_like; cl12020"
/db_xref="CDD:212339"
gene complement(13160..14074)
/gene="glyQ"
/locus_tag="Tola_0009"
/db_xref="GeneID:7883566"
CDS complement(13160..14074)
/gene="glyQ"
/locus_tag="Tola_0009"
/EC_number="6.1.1.14"
/inference="protein motif:TFAM:TIGR00388"
/note="glycine--tRNA ligase alpha chain; GlyRS; class II
aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2);
catalyzes a two-step reaction; first charging a glycine
molecule by linking its carboxyl group to the
alpha-phosphate of ATP; second by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="glycyl-tRNA synthetase subunit alpha"
/protein_id="YP_002891225.1"
/db_xref="GI:237806785"
/db_xref="InterPro:IPR002310"
/db_xref="InterPro:IPR006194"
/db_xref="GeneID:7883566"
/translation="MQKFDIKTFQGLILSLQDYWARQGCVISQPLDMEVGAGTSHPMT
FLRSIGPEPMNCAYVQPSRRPTDGRYGENPNRLQHYYQFQVILKPSPDNIQELYLGSL
RELGFDPLVHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECFPVT
GEITYGLERLAMYIQGVDSLYDLVWADGPLGKVTYRDVFHQNEVEQSTYNFEHADVPF
LFQLFDQCEKECQHLLNLELPLPLPAYERILKAAHAFNLLDARHAISVTERQRYILRI
RTLSKAVAEAYYAARERLGFPMCKATQA"
misc_feature complement(13226..14053)
/gene="glyQ"
/locus_tag="Tola_0009"
/note="Class II Glycyl-tRNA synthetase (GlyRS) alpha
subunit core catalytic domain. GlyRS functions as a
homodimer in eukaryotes, archaea and some bacteria and as
a heterotetramer in the remainder of prokaryotes and in
arabidopsis. It is responsible for the...; Region:
GlyRS_alpha_core; cd00733"
/db_xref="CDD:29812"
misc_feature complement(order(13325..13327,13337..13339,13346..13357,
13361..13363,13379..13381,13388..13390,13397..13402,
13409..13414,13421..13423,13430..13432,13436..13438,
13457..13462,13469..13471,13520..13522,13838..13840,
13886..13888,13898..13900,13925..13927,13973..13984,
13988..13990,13994..13999,14021..14023,14033..14035,
14045..14047))
/gene="glyQ"
/locus_tag="Tola_0009"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29812"
misc_feature complement(13979..14002)
/gene="glyQ"
/locus_tag="Tola_0009"
/note="motif 1; other site"
/db_xref="CDD:29812"
misc_feature complement(order(13568..13573,13577..13582,13586..13591,
13637..13639,13649..13654,13817..13825,13829..13831,
13835..13837,13883..13885,13958..13960,13964..13966))
/gene="glyQ"
/locus_tag="Tola_0009"
/note="active site"
/db_xref="CDD:29812"
misc_feature complement(13877..13888)
/gene="glyQ"
/locus_tag="Tola_0009"
/note="motif 2; other site"
/db_xref="CDD:29812"
misc_feature complement(13568..13579)
/gene="glyQ"
/locus_tag="Tola_0009"
/note="motif 3; other site"
/db_xref="CDD:29812"
gene 14180..14755
/locus_tag="Tola_0010"
/db_xref="GeneID:7883567"
CDS 14180..14755
/locus_tag="Tola_0010"
/EC_number="3.2.2.20"
/inference="protein motif:TFAM:TIGR00624"
/note="KEGG: aha:AHA_0129 DNA-3-methyladenine glycosylase
I;
TIGRFAM: DNA-3-methyladenine glycosylase I;
PFAM: methyladenine glycosylase"
/codon_start=1
/transl_table=11
/product="DNA-3-methyladenine glycosylase I"
/protein_id="YP_002891226.1"
/db_xref="GI:237806786"
/db_xref="InterPro:IPR004597"
/db_xref="InterPro:IPR005019"
/db_xref="GeneID:7883567"
/translation="MERHCAWIMRDPDYIDYHDQQWGRPEYDDRKLFAMLCLEGQQAG
LSWLTILKRIPDYHALFADFDPLVLAAFDEQQVNELMSDQRIIRNRLKIQAIIQNARA
YLALQQQGIQFSAWIWQFVGGNPMINHWQHSSEVPVSTPQAEAMSKALKKAGFKFVGP
TICYAYMQAVGMVNDHLIDCPWHPLCNNPLS"
misc_feature 14198..14731
/locus_tag="Tola_0010"
/note="Methyladenine glycosylase; Region: Adenine_glyco;
pfam03352"
/db_xref="CDD:190612"
gene 14771..15787
/gene="zntB"
/locus_tag="Tola_0011"
/db_xref="GeneID:7883568"
CDS 14771..15787
/gene="zntB"
/locus_tag="Tola_0011"
/inference="protein motif:PFAM:PF01544"
/note="PFAM: Mg2 transporter protein CorA family protein;
KEGG: ypb:YPTS_2334 Mg2 transporter protein CorA family
protein"
/codon_start=1
/transl_table=11
/product="zinc transporter"
/protein_id="YP_002891227.1"
/db_xref="GI:237806787"
/db_xref="InterPro:IPR002523"
/db_xref="GeneID:7883568"
/translation="MSENLPFHSHPKSPLHPPKALVPLEPVLAMQLDGNGRYHKLSAG
GTVPVERCWLHLDYSAESAKEWLNHSPLLPDVIRHSLLGESNRPKLVKVNGGLLLTLR
GINHNEGQRPDHMVAIRFYITEKLIVSTRHRRVYAVEQIVRNLRQGLGPKSTADWLVD
VCENLAEQAGDFIDELMDKIVRLEDEILGHRMPSRRELVEIRRQLIVLRRYLAPQRDV
FSRLANEKINWLEKDDLRHLQDIADRMGRWLEDLDASIARTSLLADEINALMTEAMNR
RTYIMSLFAMVFLPLSFCTGLLGVNLGGIPGNDSPWGFVGFCLLLLIFASSILTWLKL
RKWV"
misc_feature 14828..15784
/gene="zntB"
/locus_tag="Tola_0011"
/note="zinc transporter; Reviewed; Region: zntB; PRK09546"
/db_xref="CDD:181941"
misc_feature 14924..15778
/gene="zntB"
/locus_tag="Tola_0011"
/note="CorA-like Mg2+ transporter protein; Region: CorA;
pfam01544"
/db_xref="CDD:201848"
gene 15905..16906
/locus_tag="Tola_0012"
/db_xref="GeneID:7883569"
CDS 15905..16906
/locus_tag="Tola_0012"
/inference="protein motif:TFAM:TIGR00971"
/note="TIGRFAM: sulfate ABC transporter, periplasmic
sulfate-binding protein;
PFAM: extracellular solute-binding protein family 1;
KEGG: asa:ASA_0593 ABC-type sulfate transport system,
periplasmic component"
/codon_start=1
/transl_table=11
/product="sulfate ABC transporter, periplasmic
sulfate-binding protein"
/protein_id="YP_002891228.1"
/db_xref="GI:237806788"
/db_xref="InterPro:IPR000957"
/db_xref="InterPro:IPR005669"
/db_xref="InterPro:IPR006059"
/db_xref="GeneID:7883569"
/translation="MKKSVLSALGLLAALTSQSVFAAEVTLLNVSYDPTRELYQDYNR
IFSQYWQQQHGDTVDVNQSHGGSGKQARAVIEGLSADVITLALAQDINKVAQQGLVAA
DWESKLPNHAAPFTSTIVFLVRKDNPKQIKDWDDLIRPDIEVVTPNPKTSGGARWNYL
AAWGYALHKTGNEQGARDFVSKLYRNVKVLDSGARAATTSFVERDLGDVLIAWENEAY
LVLNELGKDKFELVTPSESILAEPPVAVVDKVAKKHGTEAVAKAYVEHLYSDEAQRIA
GKHYYRPSNPVIAKEFAKKFAPVKLFTIRELEGDWAKAQQKHFASGGTFDQVYQPGQ"
misc_feature 15950..16897
/locus_tag="Tola_0012"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature 16052..16750
/locus_tag="Tola_0012"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_11; pfam13531"
/db_xref="CDD:205709"
gene 16969..17496
/locus_tag="Tola_0013"
/db_xref="GeneID:7883570"
CDS 16969..17496
/locus_tag="Tola_0013"
/inference="protein motif:PFAM:PF06821"
/note="PFAM: protein of unknown function DUF1234;
KEGG: aha:AHA_0605 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891229.1"
/db_xref="GI:237806789"
/db_xref="InterPro:IPR010662"
/db_xref="GeneID:7883570"
/translation="MNNILLVPGLYDSGPQHWQTLWHQQNPHWLRVEQSDWTTPDLLR
WAAPVIRLLENSQEPLTLVAHSFGCLASLYAARQLPEKVSSLFLVAPADPDLLGVQEA
LINHPAPVAGRIIASSNDPWMPLDRVCFWSQRWRLPLSLLGPLRHINAESGHGTWPEG
LELLHWHCQQLSKEA"
misc_feature 16978..17466
/locus_tag="Tola_0013"
/note="Serine hydrolase; Region: Ser_hydrolase; pfam06821"
/db_xref="CDD:203524"
misc_feature 16978..>17286
/locus_tag="Tola_0013"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:205026"
gene 17735..18571
/locus_tag="Tola_0014"
/db_xref="GeneID:7883571"
CDS 17735..18571
/locus_tag="Tola_0014"
/inference="protein motif:TFAM:TIGR02139"
/note="TIGRFAM: sulfate ABC transporter, inner membrane
subunit CysT; sulfate ABC transporter, inner membrane
subunit;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: aha:AHA_0606 sulfate/thiosulfate ABC transporter,
permease protein CysT"
/codon_start=1
/transl_table=11
/product="sulfate ABC transporter, inner membrane subunit
CysT"
/protein_id="YP_002891230.1"
/db_xref="GI:237806790"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR005667"
/db_xref="InterPro:IPR011865"
/db_xref="GeneID:7883571"
/translation="MRFRSHSVLPGFAPTLGFSLLYLSLMVLLPLSALVLYSVTKQDM
GQFWQVVSSPRVVASYKLSFGASAVAALLNTFFGSIIAWILVRYQFFGKRIMDALIDL
PFAMPTAVSGIALSAIYAGNGWIGQFFAPYGIKLAFNPAGIVIALTFIGLPFVVRTMQ
PVLKEHERELEEAAACLGASRWITFRKIIFPAMVPAALTGFALAFARAVGEYGSVIFI
AGNLPMVSEIAPLMIMSHLEEYDYAGAAAIASVMLGVSFVLLLLINQLQAWSWQRLGG
VR"
misc_feature 17921..18505
/locus_tag="Tola_0014"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(17960..17965,17972..17977,17990..17992,18020..18031,
18035..18064,18071..18076,18080..18082,18179..18184,
18188..18190,18194..18196,18203..18208,18212..18214,
18224..18229,18236..18238,18287..18289,18329..18334,
18341..18343,18362..18373,18380..18385,18422..18427,
18455..18460,18467..18472,18476..18481,18488..18493,
18500..18505)
/locus_tag="Tola_0014"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(18038..18082,18362..18379)
/locus_tag="Tola_0014"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(18080..18082,18164..18166,18380..18382,18416..18418,
18425..18427,18455..18457)
/locus_tag="Tola_0014"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(18239..18277,18293..18298,18308..18310)
/locus_tag="Tola_0014"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 18571..19386
/locus_tag="Tola_0015"
/db_xref="GeneID:7883572"
CDS 18571..19386
/locus_tag="Tola_0015"
/inference="protein motif:TFAM:TIGR02140"
/note="TIGRFAM: sulfate ABC transporter, inner membrane
subunit CysW; sulfate ABC transporter, inner membrane
subunit;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: aha:AHA_0607 sulfate/thiosulfate ABC transporter,
permease protein CysW"
/codon_start=1
/transl_table=11
/product="sulfate ABC transporter, inner membrane subunit
CysW"
/protein_id="YP_002891231.1"
/db_xref="GI:237806791"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR005667"
/db_xref="InterPro:IPR011866"
/db_xref="GeneID:7883572"
/translation="MNSITTESRWVRYILILVGVGWFAALLLLPLAIVFTQALAKGLS
FFWQSLIDTDALAALRLTLFTVICSVPMNILFGLTAAWAIGRFRFRGRQALITLIDLP
FSVSPVIAGLMFVLLFGNRGWLGEWLQAHDISIIFNTPGIILATMFITVPFVVRELLP
QMEARGSEEEEAAQVLGANGWQTFWRVTLPGIRWSLLYGVILCTARAVGEFGAVSVVS
GHIRGQTNTLPLHIEILYNEYQTNAAFAVASLLALFGLFTLLAETVLNRLRHR"
misc_feature 18628..19287
/locus_tag="Tola_0015"
/note="sulfate transport protein; Provisional; Region:
cysT; CHL00187"
/db_xref="CDD:164564"
misc_feature 18766..19287
/locus_tag="Tola_0015"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(18793..18798,18805..18810,18823..18825,18853..18864,
18868..18897,18904..18909,18913..18915,19012..19017,
19021..19023,19027..19029,19036..19041,19045..19047,
19057..19062,19069..19071,19120..19122,19162..19167,
19174..19176,19195..19206,19213..19218,19255..19260)
/locus_tag="Tola_0015"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(18871..18915,19195..19212)
/locus_tag="Tola_0015"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(18913..18915,18994..18996,19213..19215,19249..19251,
19258..19260)
/locus_tag="Tola_0015"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(19072..19110,19126..19131,19141..19143)
/locus_tag="Tola_0015"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 19404..20489
/locus_tag="Tola_0016"
/db_xref="GeneID:7883573"
CDS 19404..20489
/locus_tag="Tola_0016"
/inference="protein motif:TFAM:TIGR00968"
/note="KEGG: aha:AHA_0608 sulfate/thiosulfate ABC
transporter, ATP-binding protein;
TIGRFAM: sulfate ABC transporter, ATPase subunit;
PFAM: ABC transporter related;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="sulfate ABC transporter ATPase"
/protein_id="YP_002891232.1"
/db_xref="GI:237806792"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005666"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7883573"
/translation="MSIQVEHIEKRFNQFAALHDINITFPTGELVALLGPSGCGKTTL
LRIIAGLEQADSGRILLNGTDASEMHVRERNVGFVFQHYALFRHMTVFENVAFGLRVK
PRKTRPNENEIQKKVKSLLDLIQLGHVADRYPTQLSGGQRQRVALARALAVEPQVLLL
DEPFGALDAQVRKELRRWLRRLHDELHVTSLFVTHDQEEALEVADRVVLMNAGRIEQF
ATPQEVYEKPATEFVHRFLGTVNLFHGQLHSGQLDISGSTLTNNVSGQTAADVNSIAY
VRPHELDLLPAAAAQGIPATVVRILPFGAAYRVEVTANNGVARTLIEVDVPRERVIML
ELLPGKSVRLVARQAQLYQPETKDNVA"
misc_feature 19404..20468
/locus_tag="Tola_0016"
/note="ABC-type sulfate/molybdate transport systems,
ATPase component [Inorganic ion transport and metabolism];
Region: CysA; COG1118"
/db_xref="CDD:31315"
misc_feature 19404..20117
/locus_tag="Tola_0016"
/note="Part of the ABC transporter complex cysAWTP
involved in sulfate import. Responsible for energy
coupling to the transport system. The complex is composed
of two ATP-binding proteins (cysA), two transmembrane
proteins (cysT and cysW), and a...; Region:
ABC_CysA_sulfate_importer; cd03296"
/db_xref="CDD:73055"
misc_feature 19506..19529
/locus_tag="Tola_0016"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73055"
misc_feature order(19515..19520,19524..19532,19644..19646,19884..19889,
19986..19988)
/locus_tag="Tola_0016"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73055"
misc_feature 19635..19646
/locus_tag="Tola_0016"
/note="Q-loop/lid; other site"
/db_xref="CDD:73055"
misc_feature 19812..19841
/locus_tag="Tola_0016"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73055"
misc_feature 19872..19889
/locus_tag="Tola_0016"
/note="Walker B; other site"
/db_xref="CDD:73055"
misc_feature 19896..19907
/locus_tag="Tola_0016"
/note="D-loop; other site"
/db_xref="CDD:73055"
misc_feature 19974..19994
/locus_tag="Tola_0016"
/note="H-loop/switch region; other site"
/db_xref="CDD:73055"
misc_feature 20262..20444
/locus_tag="Tola_0016"
/note="TOBE-like domain; Region: TOBE_3; pfam12857"
/db_xref="CDD:205111"
gene 20486..21442
/gene="cbl"
/locus_tag="Tola_0017"
/db_xref="GeneID:7883574"
CDS 20486..21442
/gene="cbl"
/locus_tag="Tola_0017"
/inference="protein motif:PFAM:PF03466"
/note="LysR-type transcriptional regulator similar to
CysB; contains helix-turn-helix (HTH) motif; in
Escherichia coli this protein regulates two operons
consisting of ABC transporters that are part of the cys
regulon; regulated by CysB"
/codon_start=1
/transl_table=11
/product="transcriptional regulator Cbl"
/protein_id="YP_002891233.1"
/db_xref="GI:237806793"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:7883574"
/translation="MNFQQLKIIREAARCHFNLTEVANTLYTSQSGVSRHIKELEDEL
GVELFIRRGKRLLGMTEPGKALLTMAERILTEANNIRRLADNFANSDRGRLHVATTHT
QARYALPGIIKEFRTQYPQVQLVLHQGSPSEIVSMLLSGETDIGLTSELMADYEEIAA
FPYYSWHHAILVPRGHPLTELPEVTLEDLSAWPLVTYQTGLTGRTKIDAAFAMAGIVP
DIVLSAQDSDVIKTYVELGLGVGILADMAIDAVKDSNLVRLNAEHLFPANTAWFGMKK
GKFQPNFAWHFLQICNPSLAISDIQAQVFATGELQTPLHYEI"
misc_feature 20486..21439
/gene="cbl"
/locus_tag="Tola_0017"
/note="transcriptional regulator Cbl; Reviewed; Region:
cbl; PRK12679"
/db_xref="CDD:183676"
misc_feature 20492..20677
/gene="cbl"
/locus_tag="Tola_0017"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 20765..21358
/gene="cbl"
/locus_tag="Tola_0017"
/note="The C-terminal substrate domain of LysR-type
transcriptional regulators CysB-like contains type 2
periplasmic binding fold; Region: PBP2_CysB_like; cd08413"
/db_xref="CDD:176105"
misc_feature order(20783..20785,20789..20794,20927..20935,20981..20983,
21089..21091)
/gene="cbl"
/locus_tag="Tola_0017"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176105"
misc_feature order(20786..20788,20795..20800,20807..20812,20819..20821,
20831..20833,20852..20872,20882..20884,21146..21163,
21167..21172,21179..21184,21191..21193,21320..21331,
21335..21340)
/gene="cbl"
/locus_tag="Tola_0017"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176105"
gene complement(21483..21731)
/locus_tag="Tola_0018"
/db_xref="GeneID:7883892"
CDS complement(21483..21731)
/locus_tag="Tola_0018"
/inference="protein motif:PFAM:PF01206"
/note="PFAM: SirA family protein;
KEGG: ypb:YPTS_0229 SirA family protein"
/codon_start=1
/transl_table=11
/product="SirA family protein"
/protein_id="YP_002891234.1"
/db_xref="GI:237806794"
/db_xref="InterPro:IPR001455"
/db_xref="GeneID:7883892"
/translation="MTFSADDINQTLDASGLRCPEPVMMVRKTVRLMQEGETLLVIAD
DPATVRDIPSFCRFMDHTLLASDTEQPPYRYLIRKGLN"
misc_feature complement(21495..21701)
/locus_tag="Tola_0018"
/note="SirA (also known as UvrY, and YhhP) belongs to a
family of two-component response regulators that controls
secondary metabolism and virulence. The other member of
this two-component system is a sensor kinase called BarA
which phosphorylates SirA. A...; Region: SirA; cd03423"
/db_xref="CDD:48209"
misc_feature complement(order(21660..21662,21666..21677,21684..21686,
21693..21698))
/locus_tag="Tola_0018"
/note="CPxP motif; other site"
/db_xref="CDD:48209"
gene complement(21771..23024)
/locus_tag="Tola_0019"
/db_xref="GeneID:7883893"
CDS complement(21771..23024)
/locus_tag="Tola_0019"
/inference="protein motif:PFAM:PF01547"
/note="PFAM: extracellular solute-binding protein family
1;
KEGG: aha:AHA_0135 ABC-type sugar transport system,
periplasmic component"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein"
/protein_id="YP_002891235.1"
/db_xref="GI:237806795"
/db_xref="InterPro:IPR006059"
/db_xref="GeneID:7883893"
/translation="MTFRSYLVSSLMLSLVSVSAMASSVEVLHWWTAGGEAQAAGVLR
SYWQALGNEWQDSAISGGGGQSAMTVLKSRALSGTPPEAAHLKGSELQEWAALGFLRN
LDNVARQGEWEKVLPEFVQHSVQSKGHYVAVPVGIHRVNWLWINPKVFERYQLSPPEN
WSQLLTIAKKLKQAGITPLALGDDQWQLSILFEAIVLGEGGSDFYRRAFVQLDQTALQ
SDTMQHLLELFHQLRDYIADDYGGTKWNQATHMLVEGSAAMQLMGDWVKGELTAAKVV
PGKDILCLPAPGTDGKFSYNLDSIAMFDVQSPQKQQAQLQLVNMIMTSDFQHAFNRVK
GSIPVLNNQTLTDFDQCAQHSAQQLQQAIQQQELVPSMAEGMANSSYVRQAIGDVLVG
YFNNPDGDAEQAARRLARAVLSAQR"
misc_feature complement(21999..22940)
/locus_tag="Tola_0019"
/note="ABC-type sugar transport system, periplasmic
component [Carbohydrate transport and metabolism]; Region:
UgpB; COG1653"
/db_xref="CDD:31839"
misc_feature complement(<22182..>22547)
/locus_tag="Tola_0019"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_1; pfam01547"
/db_xref="CDD:201851"
gene complement(23028..24437)
/locus_tag="Tola_0020"
/db_xref="GeneID:7883894"
CDS complement(23028..24437)
/locus_tag="Tola_0020"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
histidine kinase A domain protein; histidine kinase HAMP
region domain protein;
SMART: ATP-binding region ATPase domain protein; histidine
kinase HAMP region domain protein; histidine kinase A
domain protein;
KEGG: aha:AHA_0136 signal transduction histidine kinase"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_002891236.1"
/db_xref="GI:237806796"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:7883894"
/translation="MLLLLLLAIVLAQSLISGIWMQQLEKRELDGMLAATRDLANSAA
ATVSFFKSLPLQYRPIALDQLRNMGGSRFFVSLNKQEIVLNGIQDSPKKQLVLKEVNQ
TLLHKLGQSMLIKADFSYPADLHVFNNETLLSDIPPSWSRYTLLMEPINPPILVTQIK
LDNGEWLYLAALLPAPYMSLDENVVSPHQFRFIILLTIILFPFTFALVRWQTRPLRHL
AAAAVSLGKDIDQPPLPEAGASEIVAVTRAINIMQQRIRRYIGDREKLFSSISHDLKT
PITRLRLRVELLDDDSQIAKFSKDLDDLEMMVKGALQTVKDTHIHENIEAIDINVLLN
SMAEDYNLLEQHLTIEGHCKHLYRGKPLALKRCIANLIDNAIKYGDQARVIVMDDLEK
NSNTNMLYLYVIDEGPGLPEHQLEKVFEPYYRLAQDSSGNGLGLGIARSIARAHGGDL
VLENRPHGGLQAILSLPRN"
misc_feature complement(23664..23804)
/locus_tag="Tola_0020"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(23670..23675,23682..23687,23691..23696,
23703..23708,23712..23717,23763..23765,23769..23774,
23781..23786,23790..23795,23802..23804))
/locus_tag="Tola_0020"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(23040..23348)
/locus_tag="Tola_0020"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(23052..23054,23058..23063,23076..23078,
23082..23084,23130..23141,23208..23213,23217..23219,
23223..23225,23229..23231,23307..23309,23316..23318,
23328..23330))
/locus_tag="Tola_0020"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(23316..23318)
/locus_tag="Tola_0020"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(23133..23135,23139..23141,23211..23213,
23217..23219))
/locus_tag="Tola_0020"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(24490..25212)
/locus_tag="Tola_0021"
/db_xref="GeneID:7883895"
CDS complement(24490..25212)
/locus_tag="Tola_0021"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; transcriptional
regulator domain protein;
SMART: response regulator receiver;
KEGG: asa:ASA_4252 two-component system response
regulator"
/codon_start=1
/transl_table=11
/product="two component transcriptional regulator, winged
helix family"
/protein_id="YP_002891237.1"
/db_xref="GI:237806797"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:7883895"
/translation="MAKGKPILIVDDDQEIRELLKEYLTRAGFDVLTACDGVEMYQQL
ALSTPELIILDIMMPGDDGFSLCQQIRRKSQVPIIMLTAASDEADRVIGLELGADDYI
AKPFSPRELMARIKALLRRAEFRQPEKEVVSGRKLKFAGWTLDTRTQLLTHEDGSGID
LTGSDFILLHLFLQHPGQVLDRDTISDATRGRESLPMERGIDVQISRLRQKLGDNGKG
PRIIKTIRGSGYMLIAEVEHED"
misc_feature complement(24514..25212)
/locus_tag="Tola_0021"
/note="osmolarity response regulator; Provisional; Region:
ompR; PRK09468"
/db_xref="CDD:181883"
misc_feature complement(24856..25191)
/locus_tag="Tola_0021"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(24898..24903,24910..24912,24967..24969,
25024..25026,25048..25050,25177..25182))
/locus_tag="Tola_0021"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(25048..25050)
/locus_tag="Tola_0021"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(25024..25032,25036..25041))
/locus_tag="Tola_0021"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(24895..24903)
/locus_tag="Tola_0021"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(24517..24804)
/locus_tag="Tola_0021"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature complement(order(24526..24528,24541..24543,24577..24582,
24604..24606,24613..24615,24667..24672,24727..24729))
/locus_tag="Tola_0021"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 25420..25944
/locus_tag="Tola_0022"
/db_xref="GeneID:7883896"
CDS 25420..25944
/locus_tag="Tola_0022"
/EC_number="1.3.3.4"
/inference="protein motif:PRIAM:1.3.3.4"
/note="KEGG: asa:ASA_4245 protoporphyrinogen oxidase"
/codon_start=1
/transl_table=11
/product="Protoporphyrinogen oxidase"
/protein_id="YP_002891238.1"
/db_xref="GI:237806798"
/db_xref="InterPro:IPR008254"
/db_xref="GeneID:7883896"
/translation="MTKRILVLYSSREGQTRKIVDAILAHAPDWQAEVHNLHELPVID
LTPYDKVLIAASIRYGHFHSSLNKFVEQHYSALKEKEAAFIAVNLVARKPGKNTPETN
LYTRKWLQQSSWKPQHVAVFAGALRYSRYTWWQKRIIQLIMWMTGGSTDTSSDIEFTN
WTNVQKFAERLLKS"
misc_feature 25429..25938
/locus_tag="Tola_0022"
/note="NADPH-dependent FMN reductase; Region: FMN_red;
cl00438"
/db_xref="CDD:212217"
gene 26293..27826
/locus_tag="Tola_R0001"
/db_xref="GeneID:7883897"
rRNA 26293..27826
/locus_tag="Tola_R0001"
/product="16S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7883897"
gene 27896..27972
/locus_tag="Tola_R0002"
/note="tRNA-Ile1"
/db_xref="GeneID:7883898"
tRNA 27896..27972
/locus_tag="Tola_R0002"
/product="tRNA-Ile"
/db_xref="GeneID:7883898"
gene 27984..28059
/locus_tag="Tola_R0003"
/note="tRNA-Ala1"
/db_xref="GeneID:7883899"
tRNA 27984..28059
/locus_tag="Tola_R0003"
/product="tRNA-Ala"
/db_xref="GeneID:7883899"
gene 28266..31152
/locus_tag="Tola_R0004"
/db_xref="GeneID:7883900"
rRNA 28266..31152
/locus_tag="Tola_R0004"
/product="23S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7883900"
gene 31281..31394
/locus_tag="Tola_R0005"
/db_xref="GeneID:7883901"
rRNA 31281..31394
/locus_tag="Tola_R0005"
/product="5S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7883901"
gene 31457..31533
/locus_tag="Tola_R0006"
/note="tRNA-Asp1"
/db_xref="GeneID:7883902"
tRNA 31457..31533
/locus_tag="Tola_R0006"
/product="tRNA-Asp"
/db_xref="GeneID:7883902"
gene 31726..32523
/locus_tag="Tola_0023"
/db_xref="GeneID:7883903"
CDS 31726..32523
/locus_tag="Tola_0023"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: aeh:Mlg_2795 Mn2+-dependent serine/threonine
protein kinase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891239.1"
/db_xref="GI:237806799"
/db_xref="GeneID:7883903"
/translation="MFVIKFINHEADVADSFITQMREVVLSNPAARNLETFRMIKSTA
NRSVYCCSLNERIFYIKLYSFSSPIKYLKHLFRYSHGIHGYKKSIRLLNENVSTATPV
LAMSYLGGLRSLVVHEAIPGVDAEAFFVNYSNNKNLRSTVLKKIGALIAELFAKGFSH
GDMNFGGFIVDAKDGNVSVSLIDVDNITNNPKQRFRDIVNFNAHLFVTAKKAQVEMLS
SDELREMYLSMLGIYNFDMTETSFFQRLNQATELKLIKWGQKGYIAI"
misc_feature <31993..32280
/locus_tag="Tola_0023"
/note="Protein Kinases, catalytic domain; Region:
PKc_like; cl09925"
/db_xref="CDD:213116"
gene complement(32561..33280)
/locus_tag="Tola_0024"
/db_xref="GeneID:7883904"
CDS complement(32561..33280)
/locus_tag="Tola_0024"
/inference="protein motif:PFAM:PF00665"
/note="PFAM: Integrase catalytic region;
KEGG: vsp:VS_1873 transposase (orfB) of insertion sequence
ISVisp1 ; IS3 family subgroup IS3"
/codon_start=1
/transl_table=11
/product="integrase catalytic subunit"
/protein_id="YP_002891240.1"
/db_xref="GI:237806800"
/db_xref="InterPro:IPR001584"
/db_xref="GeneID:7883904"
/translation="MLLTHIKRVFKASAERYGSPKVYQALRTQGVVVSQKRVARLMRE
NGLKARVERVYKQLNKMRAELKVLPNHRLQTPKPTGPNQQWSSDVTYIRHGHRHVFLA
VIVDLWSRKIIGWALHEKLNAELSVAALYQALKQRKPKPGLILHTDRGVEFRAQAMQI
WLNKFGIRHSMNRPGRCTDNAEVESFFKTLKSELIYENYFPTVSALRDQISRYIRNFY
NKVRLHSSLNYVSPIQFEHAA"
misc_feature complement(33122..33277)
/locus_tag="Tola_0024"
/note="HTH-like domain; Region: HTH_21; pfam13276"
/db_xref="CDD:205456"
misc_feature complement(32699..33040)
/locus_tag="Tola_0024"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
misc_feature complement(32585..32785)
/locus_tag="Tola_0024"
/note="Integrase core domain; Region: rve_3; pfam13683"
/db_xref="CDD:205859"
gene complement(33397..33741)
/locus_tag="Tola_0025"
/db_xref="GeneID:7883905"
CDS complement(33397..33741)
/locus_tag="Tola_0025"
/inference="protein motif:PFAM:PF01527"
/note="PFAM: transposase IS3/IS911 family protein;
KEGG: abo:ABO_1787 transposase, OrfA"
/codon_start=1
/transl_table=11
/product="transposase IS3/IS911 family protein"
/protein_id="YP_002891241.1"
/db_xref="GI:237806801"
/db_xref="InterPro:IPR002514"
/db_xref="GeneID:7883905"
/translation="MPAYTNAKRIFKYSDEFKMKAVQWSFDPQRSVKDVAAALDIHPF
MLSRWRKEFREGKYGPMKPTTKPSKPNAQLKEQDKLKKLRKRIAELEEENDILKKWQR
FLAEERRKHSNS"
misc_feature complement(33400..33720)
/locus_tag="Tola_0025"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG2963"
/db_xref="CDD:32783"
misc_feature complement(33475..33708)
/locus_tag="Tola_0025"
/note="Transposase; Region: HTH_Tnp_1; pfam01527"
/db_xref="CDD:201841"
gene complement(33812..34897)
/locus_tag="Tola_0026"
/db_xref="GeneID:7883906"
CDS complement(33812..34897)
/locus_tag="Tola_0026"
/inference="protein motif:PFAM:PF00534"
/note="PFAM: glycosyl transferase group 1;
KEGG: hip:CGSHiEE_00235 lipooligosaccharide glycosyl
transferase G"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_002891242.1"
/db_xref="GI:237806802"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:7883906"
/translation="MGSDKLNNDRITGINIIYHTIKPGGGMERYALDLIENLSARNIP
LRVIARKINWPGIAPSNVEFVKVPDFTPFSRVNKHLFDVTASKYINSAWPTIGLTRVA
GSTDIAVVGGTHKGYLNAIKKKHHGIFDYLTIKRETSFYKNAKCIVAHSRQVGQEVID
HYQIDKDKLHIIYPPVSFSSFSLAARKEREQIRKELGVQDDQILLLFPSNNHDRKGLD
LILTALERSDKRFVLAIASRKAVTHPRVINLGFRNNMPALYAAADAAILASKYEPFGL
VGPEAVLCGTPVILANTVGATEVIAEPACTRFQLTPESLTDALEKFLKMQKSEPLIIT
KPDLLMPQITDVDQHCTELLELLKKTN"
misc_feature complement(33929..34858)
/locus_tag="Tola_0026"
/note="This family is most closely related to the GT1
family of glycosyltransferases and named after YqgM in
Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to...; Region:
GT1_YqgM_like; cd03801"
/db_xref="CDD:99974"
misc_feature complement(33821..34852)
/locus_tag="Tola_0026"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
gene complement(34936..35970)
/locus_tag="Tola_0027"
/db_xref="GeneID:7883907"
CDS complement(34936..35970)
/locus_tag="Tola_0027"
/inference="protein motif:PFAM:PF00534"
/note="PFAM: glycosyl transferase group 1;
KEGG: mmw:Mmwyl1_3481 glycosyl transferase group 1"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_002891243.1"
/db_xref="GI:237806803"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:7883907"
/translation="MTPTIMHVNLAKGFRGGERQTELLIKELAKHDLKQYLVCRDNSP
LREHLKAVSNLEFITANHQLMGHFAVHQKIDMIHAHEAKAVHWAWIENRLRGTPYILT
RRVPQQIKQNLFNKLCYKYASQAVAISSPIASYLSGLQLAPVTTIPSALAHLPHNPDI
SKEIKKQYPDKFLIGHAGALVDKHKGQREIIKAATLLENKVPNIHFIMLGDGPDAEQL
KDESKTLTNMEWLGFKQNPGDYFAALDLFVFPSRNEGLGSTLLDVMDFMVPIIASDVD
GIPDIVKHEQTGLLIPVNNADALAKAILRLFNDKPLREQLATTAKEKLDNFTPATMAK
RYLALYRSLL"
misc_feature complement(34948..35925)
/locus_tag="Tola_0027"
/note="This family is most closely related to the GT1
family of glycosyltransferases and named after YqgM in
Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to...; Region:
GT1_YqgM_like; cd03801"
/db_xref="CDD:99974"
misc_feature complement(34939..>35787)
/locus_tag="Tola_0027"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
gene complement(36034..36819)
/locus_tag="Tola_0028"
/db_xref="GeneID:7883908"
CDS complement(36034..36819)
/locus_tag="Tola_0028"
/inference="protein motif:PFAM:PF00535"
/note="PFAM: glycosyl transferase family 2;
KEGG: pmu:PM1306 hypothetical protein"
/codon_start=1
/transl_table=11
/product="family 2 glycosyl transferase"
/protein_id="YP_002891244.1"
/db_xref="GI:237806804"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:7883908"
/translation="MNKDALISAILIVKNEEQHLAACLDTIKDWVSEIIILDSGSTDD
TLKIAERYQAKVYQDIDWQGFGVQRQRAQRLANGTWCLWLDADERVTPELRQEIESVI
AKPADNTGYSIPRLNWYFGRYIRHCGWYPKPVLRLYPRALTTYNDSYVHEKVIVPQDM
TVKRLKNDLLHYPYKNLRHHVTKSSCYAHDWALAKYQQGKRTTLIAASMHSLLRFCRM
YFFQRGLLDGSAGFLLSVISAYYTFLKYAELWVMQRSSSDKPK"
misc_feature complement(36115..36801)
/locus_tag="Tola_0028"
/note="UDP-glucose LOS-beta-1,4 glucosyltransferase is
required for biosynthesis of lipooligosaccharide; Region:
Beta4Glucosyltransferase; cd02511"
/db_xref="CDD:133005"
misc_feature complement(order(36559..36561,36565..36567))
/locus_tag="Tola_0028"
/note="putative metal binding site; other site"
/db_xref="CDD:133005"
gene complement(36812..37879)
/locus_tag="Tola_0029"
/db_xref="GeneID:7883909"
CDS complement(36812..37879)
/locus_tag="Tola_0029"
/inference="protein motif:PFAM:PF01075"
/note="PFAM: glycosyl transferase family 9;
KEGG: asa:ASA_0037 ADP-heptose--LPS heptosyltransferase
III"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_002891245.1"
/db_xref="GI:237806805"
/db_xref="InterPro:IPR002201"
/db_xref="GeneID:7883909"
/translation="MPLFLRAPEALCLIRLSAIGDCVHAVAMVQAIQRQWPQTKITWI
MGKAEASLLHDLPGVEVIVFDKNAGFRAYTSIWKQLRDRHFDALLHMQSALRASLLTL
GIKADKTLGFDQQRAGDGQSLFTNLKVPSPQSPHVLDGFMAFAAELGVHDLTPQWHIP
VAETDNDWAKQNISGEKPTLLIAPSASKAYKNWTKEGYAALADHAAAQGFQVMLCGGP
SPQEKSFAEEISALCQHKPVNLVGQTTLKRLLALIKQATLVLAPDTGPAHMATAVGTP
VIGLYAHHNPARTGPYFCKDYVVSVYQALIEAQTGKKMAQLAWRTRLKQADAMRHIRI
ADVKLQFDNLAAQIQETRAHE"
misc_feature complement(37004..37846)
/locus_tag="Tola_0029"
/note="Lipopolysaccharide heptosyltransferase is involved
in the biosynthesis of lipooligosaccharide (LOS).
Lipopolysaccharide (LPS) is a major component of the outer
membrane of gram-negative bacteria. LPS
heptosyltransferase transfers heptose molecules from...;
Region: GT1_LPS_heptosyltransferase; cd03789"
/db_xref="CDD:99964"
misc_feature complement(36977..37660)
/locus_tag="Tola_0029"
/note="Glycosyltransferase family 9 (heptosyltransferase);
Region: Glyco_transf_9; pfam01075"
/db_xref="CDD:110100"
misc_feature complement(order(37073..37075,37082..37087,37094..37096,
37130..37135,37235..37237,37331..37336))
/locus_tag="Tola_0029"
/note="putative active site [active]"
/db_xref="CDD:99964"
gene complement(37983..39008)
/locus_tag="Tola_0030"
/db_xref="GeneID:7883910"
CDS complement(37983..39008)
/locus_tag="Tola_0030"
/inference="protein motif:TFAM:TIGR02195"
/note="TIGRFAM: lipopolysaccharide heptosyltransferase II;
PFAM: glycosyl transferase family 9;
KEGG: asa:ASA_4220 ADP-heptose-LPS heptosyltransferase II"
/codon_start=1
/transl_table=11
/product="lipopolysaccharide heptosyltransferase II"
/protein_id="YP_002891246.1"
/db_xref="GI:237806806"
/db_xref="InterPro:IPR002201"
/db_xref="InterPro:IPR011910"
/db_xref="GeneID:7883910"
/translation="MSNMLIIGPAWVGDMVMSQSLYITLKQQHPHMKLHVMAPRWCLP
LLARMPQVDKAIEMPLGHGDFNLAARWRLGRQLKNNKYDQAIVLPNSLKSALIPLFAG
IPLRTGWKGESRYGVLNDLRRNKESFPLMVERYCALAFPRRKMHSAKDLPAIPYPALQ
VDTEQQTAVKERLSLTTERAVLGLCPGAEFGPAKRWPEQHYATVAQRWIDSGGDVWIF
GSAKDQPVARTIQAHLTPEQQAHCHLIAGTTSLTEALDLLAACNKVVSNDSGLMHIAA
AVGTPLVAVYGSTSPGYTPPLSQKVQVVQTDINCRPCFKKQCPLKHLKCLTELSPETV
WQALAAL"
misc_feature complement(37986..39008)
/locus_tag="Tola_0030"
/note="ADP-heptose:LPS heptosyltransferase [Cell envelope
biogenesis, outer membrane]; Region: RfaF; COG0859"
/db_xref="CDD:31200"
misc_feature complement(37989..39002)
/locus_tag="Tola_0030"
/note="Lipopolysaccharide heptosyltransferase is involved
in the biosynthesis of lipooligosaccharide (LOS).
Lipopolysaccharide (LPS) is a major component of the outer
membrane of gram-negative bacteria. LPS
heptosyltransferase transfers heptose molecules from...;
Region: GT1_LPS_heptosyltransferase; cd03789"
/db_xref="CDD:99964"
misc_feature complement(order(38187..38189,38196..38201,38208..38210,
38244..38249,38355..38357,38454..38459))
/locus_tag="Tola_0030"
/note="putative active site [active]"
/db_xref="CDD:99964"
gene complement(39008..40258)
/locus_tag="Tola_0031"
/db_xref="GeneID:7883911"
CDS complement(39008..40258)
/locus_tag="Tola_0031"
/inference="protein motif:PFAM:PF04932"
/note="PFAM: O-antigen polymerase;
KEGG: msu:MS0243 RfaL protein"
/codon_start=1
/transl_table=11
/product="O-antigen polymerase"
/protein_id="YP_002891247.1"
/db_xref="GI:237806807"
/db_xref="InterPro:IPR007016"
/db_xref="GeneID:7883911"
/translation="MPVSSEQVKSLIIQSCYFLFGVLCISTRSGYSYAPAVLLLMSLP
LLFRKQTYQILDRNGWLLFAILLIYPLVHGLSILTDGGTIKEFDRPSKVIMGAAILLF
CLRNPPRFKWLMLGIATGAITAGSRALFDRLVTGYGRAFEWMVPIQGGDISMTLGLLS
LCGVMWSIKTANKGLIVYFALASILGVLGSILSGSRGGWVLFPVILFVIYRIFKDWFS
PKVKLGMGLALCLLVAFCLTPQSGVPTRIAAAKSDISLYLSGQNKNTSLGHRFEIWKS
SVDSFLEKPLFGWGYHGVRQSQEQQYKQGLITKEAYDFNSHAHNQFLDEMAKRGIIGL
GALLALLLIPLYLFKQYLNQSFTPETRTLAAAGVIVVLSTIDYSLSQAFLYHSSGIVF
YCASIIFLYSAVRSQQPINGKSLL"
misc_feature complement(39053..40081)
/locus_tag="Tola_0031"
/note="Lipid A core - O-antigen ligase and related enzymes
[Cell envelope biogenesis, outer membrane]; Region: RfaL;
COG3307"
/db_xref="CDD:33116"
misc_feature complement(39287..39718)
/locus_tag="Tola_0031"
/note="O-Antigen ligase; Region: Wzy_C; pfam04932"
/db_xref="CDD:203125"
gene complement(40343..41296)
/locus_tag="Tola_0032"
/db_xref="GeneID:7883912"
CDS complement(40343..41296)
/locus_tag="Tola_0032"
/inference="protein motif:TFAM:TIGR02197"
/note="TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase;
PFAM: NAD-dependent epimerase/dehydratase; 3-beta
hydroxysteroid dehydrogenase/isomerase;
dTDP-4-dehydrorhamnose reductase;
KEGG: aha:AHA_4232
ADP-L-glycero-D-manno-heptose-6-epimerase"
/codon_start=1
/transl_table=11
/product="ADP-L-glycero-D-manno-heptose-6-epimerase"
/protein_id="YP_002891248.1"
/db_xref="GI:237806808"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002225"
/db_xref="InterPro:IPR005913"
/db_xref="InterPro:IPR011912"
/db_xref="GeneID:7883912"
/translation="MIIVTGGAGFIGSNLVKALNQAGRKDIVVVDDLTDGTKFVNLVD
LDIADYIDKDEFIARIVSGDHFEEWGGISAILHQGACSATTEWNGKFVMDVNYEYSKD
LLHYCLEYGVQFIYASSAATYGGRNDNFIEERRFEQPLNVYGYSKFLFDEYVRRILPE
TDLQIVGLKYFNVYGPREQHKGSMASVAFHLNNQVLKGENVKLFEGCDGFPNGGQTRD
FIYVEDVAKVVLWFMNHPDKSGIFNCGTGKAEPFQNVAEAVLKHHGKGEIEYIPFPDH
LKGRYQSFTQADLTKLRATGCDVKFRTVAEGVAEYMAWLNK"
misc_feature complement(40346..41296)
/locus_tag="Tola_0032"
/note="ADP-L-glycero-D-mannoheptose 6-epimerase (GME),
extended (e) SDRs; Region: ADP_GME_SDR_e; cd05248"
/db_xref="CDD:187559"
misc_feature complement(40346..41296)
/locus_tag="Tola_0032"
/note="ADP-L-glycero-D-mannoheptose-6-epimerase;
Provisional; Region: rfaD; PRK11150"
/db_xref="CDD:182998"
misc_feature complement(order(40754..40759,40778..40780,40784..40789,
40856..40858,40868..40870,40940..40948,41000..41002,
41012..41014,41024..41026,41051..41053,41057..41065,
41138..41140,41183..41185,41201..41209,41264..41272,
41279..41284))
/locus_tag="Tola_0032"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187559"
misc_feature complement(order(40829..40831,40838..40843,40850..40852,
40862..40864,40871..40885,40895..40897,40994..40996,
41006..41008,41018..41020,41027..41038,41141..41143,
41147..41164,41168..41173,41180..41182,41186..41191,
41195..41200))
/locus_tag="Tola_0032"
/note="homopentamer interface [polypeptide binding]; other
site"
/db_xref="CDD:187559"
misc_feature complement(order(40541..40543,40646..40648,40727..40729,
40736..40738,40742..40750,40781..40783,41045..41047))
/locus_tag="Tola_0032"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187559"
misc_feature complement(order(40856..40858,40868..40870,40940..40942,
41009..41011))
/locus_tag="Tola_0032"
/note="active site"
/db_xref="CDD:187559"
gene complement(41396..42505)
/locus_tag="Tola_0033"
/db_xref="GeneID:7883913"
CDS complement(41396..42505)
/locus_tag="Tola_0033"
/inference="protein motif:PFAM:PF00005"
/note="with malEFG is involved in import of
maltose/maltodextrin"
/codon_start=1
/transl_table=11
/product="maltose/maltodextrin transporter ATP-binding
protein"
/protein_id="YP_002891249.1"
/db_xref="GI:237806809"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005116"
/db_xref="InterPro:IPR013611"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7883913"
/translation="MAGVILRNVCKTFGDVTISKDINLDIEDGEFVVFVGPSGCGKST
LLRMIAGLEDITSGELLIGEQRMNEVPPAERGVGMVFQSYALYPHLSVADNMSFGLKL
AGASKTEIQQRVQQAADILQLGALLDRQPKALSGGQRQRVAIGRTLVGEPNVFLLDEP
LSNLDAALRVQMRIELARLHKRLGCTMIYVTHDQIEAMTLAHKIVVLDGGLVSQVGKP
LALYHYPANRFVAGFLGSPKMNFLPVTVLAAESARVQVEIAGQTSLWLPVDGTSVSAG
DQMTLGIRPEHLLDAAASPHQLHGTILVAEQLGNETQIHLQLAGQEHPLVYRHHDVAV
VRDGTALTIGLPAERCHLFHADGRACQRLHPEPGV"
misc_feature complement(41399..42505)
/locus_tag="Tola_0033"
/note="maltose/maltodextrin transporter ATP-binding
protein; Provisional; Region: PRK11000"
/db_xref="CDD:182893"
misc_feature complement(41858..42496)
/locus_tag="Tola_0033"
/note="The N-terminal ATPase domain of the maltose
transporter, MalK. ATP binding cassette (ABC) proteins
function from bacteria to human, mediating the
translocation of substances into and out of cells or
organelles. ABC transporters contain two...; Region:
ABC_MalK_N; cd03301"
/db_xref="CDD:73060"
misc_feature complement(42377..42400)
/locus_tag="Tola_0033"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(order(41930..41932,42029..42034,42260..42262,
42374..42382,42386..42391))
/locus_tag="Tola_0033"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73060"
misc_feature complement(42260..42271)
/locus_tag="Tola_0033"
/note="Q-loop/lid; other site"
/db_xref="CDD:73060"
misc_feature complement(42077..42106)
/locus_tag="Tola_0033"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73060"
misc_feature complement(42029..42046)
/locus_tag="Tola_0033"
/note="Walker B; other site"
/db_xref="CDD:73060"
misc_feature complement(42011..42022)
/locus_tag="Tola_0033"
/note="D-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(41924..41944)
/locus_tag="Tola_0033"
/note="H-loop/switch region; other site"
/db_xref="CDD:73060"
misc_feature complement(41639..41797)
/locus_tag="Tola_0033"
/note="TOBE domain; Region: TOBE_2; cl01440"
/db_xref="CDD:207413"
misc_feature complement(41447..41665)
/locus_tag="Tola_0033"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:203932"
gene complement(42652..43527)
/locus_tag="Tola_0034"
/db_xref="GeneID:7883914"
CDS complement(42652..43527)
/locus_tag="Tola_0034"
/inference="protein motif:PFAM:PF07148"
/note="PFAM: Maltose operon periplasmic;
KEGG: yen:YE3861 maltose regulon periplasmic protein"
/codon_start=1
/transl_table=11
/product="maltose regulon periplasmic protein"
/protein_id="YP_002891250.1"
/db_xref="GI:237806810"
/db_xref="InterPro:IPR010794"
/db_xref="GeneID:7883914"
/translation="MKYTTLAFLLSLTIGGLAAPVFAAEDNHTAPAITASQLQTIHWQ
SVQAGENAEFDMNASGQNLSLNQISGKVLALQLPADHGTLTLRLRSLIDGKQVFSPNV
LVLDQQQQPAAFYSSNQFSYQPASLLTGDRLEGTLKLSPAPGQKSIYLLIYTTPQDVA
QHTTLEGAVKAYAKATGNQPPNIPDPVAQHSAQGHLSLKVTTERNNDAVTIGSNHSGI
AAASPVAAPATQEITAPAVTGLLPETENYFNLQIRQAVKNSDMARALTLVGEAEHLGS
ATARTTFINSVQPRK"
misc_feature complement(42655..43527)
/locus_tag="Tola_0034"
/note="maltose regulon periplasmic protein; Provisional;
Region: PRK10564"
/db_xref="CDD:182553"
gene complement(43594..44829)
/gene="lamB"
/locus_tag="Tola_0035"
/db_xref="GeneID:7883915"
CDS complement(43594..44829)
/gene="lamB"
/locus_tag="Tola_0035"
/inference="protein motif:PFAM:PF02264"
/note="porin involved in the transport of maltose and
maltodextrins"
/codon_start=1
/transl_table=11
/product="maltoporin"
/protein_id="YP_002891251.1"
/db_xref="GI:237806811"
/db_xref="InterPro:IPR003192"
/db_xref="GeneID:7883915"
/translation="MMHHLQKLPLALAIGAVLSSASAMAVDFHGYARSGIGWTSDGGE
QQCHQLAGAGAKYRLGNECETYAELKLGQELYKENDQVFALDTNVAYSVSQQNDWEST
SPAFREMNVQGKNLIAALPGANLWAGKRFYQRHDVHMIDFYYWDISGPGAGLENIDLG
FGKLSAAVTRDTESGGSTAWIDGTETTKDTNNDIFDVRLASLATNTDGTLELGATYGH
ANTADGYELADDASENGVMLTAEHTQSMLNGFNKFVVQYATDSMTSWNNGHAQGASVN
NNGSMVRVIDHGAISLNDKWDLMYVGLYQDTDLDNDNGSTWYSAGVRPMYKWTPIMST
QFEAGYDHVKDQASDETNKQYKVTLAQQWQAGNNQWARPAIRLYATYAKWDEKFGTGT
SSLADDNQVTFGAQFEAWW"
misc_feature complement(43597..44754)
/gene="lamB"
/locus_tag="Tola_0035"
/note="The Maltoporin-like channels (LamB porin) form a
trimeric structure which facilitate the diffusion of
maltodextrins and other sugars across the outer membrane
of Gram-negative bacteria. The membrane channel is formed
by an 18-strand antiparallel...; Region: Maltoporin-like;
cd01346"
/db_xref="CDD:30073"
misc_feature complement(order(43597..43599,43603..43605,43609..43611,
43615..43617,43705..43707,43711..43713,43738..43743,
43837..43839,44251..44253,44257..44259,44314..44328,
44374..44388,44437..44439,44443..44451,44455..44457,
44491..44493,44497..44505,44509..44514,44551..44553,
44557..44565,44575..44577,44581..44583,44629..44637,
44716..44724,44728..44730,44746..44748))
/gene="lamB"
/locus_tag="Tola_0035"
/note="trimer interface; other site"
/db_xref="CDD:30073"
misc_feature complement(order(44392..44394,44401..44403,44407..44409,
44428..44430,44437..44439,44509..44511,44626..44628,
44632..44634,44731..44733))
/gene="lamB"
/locus_tag="Tola_0035"
/note="sugar binding site [chemical binding]; other site"
/db_xref="CDD:30073"
gene complement(44902..46011)
/locus_tag="Tola_0036"
/db_xref="GeneID:7883916"
CDS complement(44902..46011)
/locus_tag="Tola_0036"
/inference="protein motif:PFAM:PF00005"
/note="with malEFG is involved in import of
maltose/maltodextrin"
/codon_start=1
/transl_table=11
/product="maltose/maltodextrin transporter ATP-binding
protein"
/protein_id="YP_002891252.1"
/db_xref="GI:237806812"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005116"
/db_xref="InterPro:IPR013611"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7883916"
/translation="MAGVTLRNVCKTYGEVAISKDINLEINNGEFVVFVGPSGCGKST
LLRMIAGLEDISAGDLMIGERRMNDVPPAERGVGMVFQSYALYPHLSVADNMSFGLKL
AGAGKPQIQQRVNHASEVLQLAHLLERKPKALSGGQRQRVAIGRTLVAEPQVFLLDEP
LSNLDAGLRVQMRIEIARLHKRLRSTMIYVTHDQVEAMTLADKIVVLEGGSIAQVGKP
LELYHYPANRFVAGFIGSPKMNFLPVRVHATEAERVQVELPDEQLLWLQVDSRDVQIG
SMLSLGIRPEHLLPGEAAEYRLRGEVSVVEQLGNETQIHVQMPTIQQNLVYRHNDVAL
VEEGSMIEIGLPVQRCHLFREDGTACRRLHKELGV"
misc_feature complement(44905..46011)
/locus_tag="Tola_0036"
/note="maltose/maltodextrin transporter ATP-binding
protein; Provisional; Region: PRK11000"
/db_xref="CDD:182893"
misc_feature complement(45364..46002)
/locus_tag="Tola_0036"
/note="The N-terminal ATPase domain of the maltose
transporter, MalK. ATP binding cassette (ABC) proteins
function from bacteria to human, mediating the
translocation of substances into and out of cells or
organelles. ABC transporters contain two...; Region:
ABC_MalK_N; cd03301"
/db_xref="CDD:73060"
misc_feature complement(45883..45906)
/locus_tag="Tola_0036"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(order(45436..45438,45535..45540,45766..45768,
45880..45888,45892..45897))
/locus_tag="Tola_0036"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73060"
misc_feature complement(45766..45777)
/locus_tag="Tola_0036"
/note="Q-loop/lid; other site"
/db_xref="CDD:73060"
misc_feature complement(45583..45612)
/locus_tag="Tola_0036"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73060"
misc_feature complement(45535..45552)
/locus_tag="Tola_0036"
/note="Walker B; other site"
/db_xref="CDD:73060"
misc_feature complement(45517..45528)
/locus_tag="Tola_0036"
/note="D-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(45430..45450)
/locus_tag="Tola_0036"
/note="H-loop/switch region; other site"
/db_xref="CDD:73060"
misc_feature complement(44953..45171)
/locus_tag="Tola_0036"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:203932"
gene 46482..47663
/gene="malE"
/locus_tag="Tola_0037"
/db_xref="GeneID:7883917"
CDS 46482..47663
/gene="malE"
/locus_tag="Tola_0037"
/inference="protein motif:PFAM:PF01547"
/note="functions in the MalKFGE ABC transporter complex to
transport maltose into the cell by using ATP hydrolysis"
/codon_start=1
/transl_table=11
/product="maltose ABC transporter periplasmic protein"
/protein_id="YP_002891253.1"
/db_xref="GI:237806813"
/db_xref="InterPro:IPR006059"
/db_xref="InterPro:IPR006060"
/db_xref="GeneID:7883917"
/translation="MKKIKNLALTALAALVISAPAMAKLQEGKLVIWINGDKGYNGLA
EVGKKFEQDTGVQVLVEHPDKMEEKYPQVAASGDGPDIVFWAHDRFGGYAQSGLLTEV
HPSKELQDKMFPFTWDAVRFNGKLIGYPVAVEALSLIYNKDLIKTPPKSWEDIPALDK
ELRAKGKSAIMWNLQEPYFSWPLLAAAGGYAFKTTPDGYDAKDVGVNNAGAQAGLQFI
VDLVKNKHISADVDYSIADAAFNKGETAMTINGPWAWSNSDKSGINYGVAQLPTFQGK
PSKAFVGVLTAGINSASPNKDLAAEFLENYLLTDDGLDKVNKDKPLGAVSLMSFQKKL
EADPRIAATMANAKAGEIMPNIPQMTAFWYAEKNAIVNATAGRQPVKEALDEVAKQMT
K"
misc_feature 46482..47660
/gene="malE"
/locus_tag="Tola_0037"
/note="maltose ABC transporter periplasmic protein;
Reviewed; Region: malE; PRK09474"
/db_xref="CDD:181889"
misc_feature 46599..47417
/gene="malE"
/locus_tag="Tola_0037"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_1; pfam01547"
/db_xref="CDD:201851"
gene 47733..49319
/gene="malF"
/locus_tag="Tola_0038"
/db_xref="GeneID:7883918"
CDS 47733..49319
/gene="malF"
/locus_tag="Tola_0038"
/inference="protein motif:PFAM:PF00528"
/note="with MalKGE is involved in maltose transport into
the cell"
/codon_start=1
/transl_table=11
/product="maltose transporter membrane protein"
/protein_id="YP_002891254.1"
/db_xref="GI:237806814"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:7883918"
/translation="MQLSVAHTTPPRLPQNKKWWRSAMFTRSLLGLVAVLNGYLIVQM
YAQREYLFAMLTLLLAGTGIYLFASRKAYSWRYVYPGLVGMGLFVLFPLFCTIGIAFT
NYSAVHQLSFERAQSVILDRQFQSGNTLNFTLLGSDGHWQLQLQDSETNQTLLSAPFA
LDNQPQRLNMVPKTADTGATKAPLKVITQNRQALGQLTAVMPDGSELVMSSLRQFSAI
KPLYTLQEDDRGLRNNQTGELYQPNDEMGFYQAVDAKGEWIADTRMSPGYTVTIGWDN
FLRVLQDKGIQQPFIKIFIWTVLFAGLTVMFTLAVGMVLACLVQWQPLKGKAMYRLLL
ILPYAVPGFISILIFKGLFNQSFGEINMLLEQMFGLKPEWFTNPMLAKAMILIVNVWL
GYPYMMILCMGLLKAIPDDLYEASALDGATPLQNFFRITLPLLIKPLTPLLIACFAFN
FNNFVLIQLLTNGGPNMLGTSTPAGNTDLLVSYTYRIAFEGSGGQDFGLAAAIATLIF
LLVGALAILNLKASKLSVEQ"
misc_feature 48612..49148
/gene="malF"
/locus_tag="Tola_0038"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(48660..48665,48672..48677,48690..48692,48720..48731,
48735..48764,48771..48776,48780..48782,48900..48905,
48909..48911,48918..48920,48927..48932,48936..48938,
48948..48953,48960..48962,49011..49013,49053..49058,
49065..49067,49086..49097,49104..49109,49146..49148)
/gene="malF"
/locus_tag="Tola_0038"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(48738..48782,49086..49103)
/gene="malF"
/locus_tag="Tola_0038"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(48780..48782,48885..48887,49104..49106,49140..49142)
/gene="malF"
/locus_tag="Tola_0038"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(48963..49001,49017..49022,49032..49034)
/gene="malF"
/locus_tag="Tola_0038"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 49331..50221
/gene="malG"
/locus_tag="Tola_0039"
/db_xref="GeneID:7883919"
CDS 49331..50221
/gene="malG"
/locus_tag="Tola_0039"
/inference="protein motif:PFAM:PF00528"
/note="with MalKFE is involved in the transport of maltose
into the cell"
/codon_start=1
/transl_table=11
/product="maltose transporter permease"
/protein_id="YP_002891255.1"
/db_xref="GI:237806815"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:7883919"
/translation="MAIVQTKALRYRLWAAHAGLWCFIALIMFPLLMVIAISLRSGNF
ATGELIPSHPSLEHWKLALGFSVTNPDGSVTPPPFPVLLWLWNSVKVAFVTAVGIVAL
STTCAYAFARMKFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQYIPFLGLNTHG
GLIFAYLGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVV
FILSFIGAVTEVPIASLLLRDVSSYTLAVGMQQYLYPQNYLWGDFAAAAVLSAIPITV
VFLLAQRWLVGGLTAGGVKG"
misc_feature 49331..50218
/gene="malG"
/locus_tag="Tola_0039"
/note="ABC-type maltose transport systems, permease
component [Carbohydrate transport and metabolism]; Region:
MalG; COG3833"
/db_xref="CDD:33626"
misc_feature 49583..50152
/gene="malG"
/locus_tag="Tola_0039"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(49631..49636,49643..49648,49661..49663,49691..49702,
49706..49735,49742..49747,49751..49753,49829..49834,
49838..49840,49844..49846,49853..49858,49862..49864,
49874..49879,49886..49888,49937..49939,49979..49984,
49991..49993,50012..50023,50030..50035,50072..50077,
50105..50110,50117..50122,50126..50131,50138..50143,
50150..50152)
/gene="malG"
/locus_tag="Tola_0039"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(49709..49753,50012..50029)
/gene="malG"
/locus_tag="Tola_0039"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(49751..49753,49814..49816,50030..50032,50066..50068,
50075..50077,50105..50107)
/gene="malG"
/locus_tag="Tola_0039"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(49889..49927,49943..49948,49958..49960)
/gene="malG"
/locus_tag="Tola_0039"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 50378..50647
/locus_tag="Tola_0040"
/db_xref="GeneID:7883920"
CDS 50378..50647
/locus_tag="Tola_0040"
/inference="protein motif:TFAM:TIGR01552"
/note="TIGRFAM: prevent-host-death family protein;
PFAM: protein of unknown function DUF172;
KEGG: sbn:Sbal195_4669 prevent-host-death family protein"
/codon_start=1
/transl_table=11
/product="prevent-host-death family protein"
/protein_id="YP_002891256.1"
/db_xref="GI:237806816"
/db_xref="InterPro:IPR003756"
/db_xref="InterPro:IPR006442"
/db_xref="GeneID:7883920"
/translation="MGVMETLTANQAKTQFGDMLLKVQRAPVQISRNGKPVAVLLSVE
DYQALEAIKLRLLQEKIEQARADIAAGKLVEGDALFSSLLNGEFD"
misc_feature 50387..50590
/locus_tag="Tola_0040"
/note="Antitoxin Phd_YefM, type II toxin-antitoxin system;
Region: PhdYeFM_antitox; pfam02604"
/db_xref="CDD:202305"
gene 50631..50963
/locus_tag="Tola_0041"
/db_xref="GeneID:7883921"
CDS 50631..50963
/locus_tag="Tola_0041"
/inference="protein motif:PFAM:PF05016"
/note="PFAM: plasmid stabilization system;
KEGG: sbn:Sbal195_4670 plasmid stabilization system
protein"
/codon_start=1
/transl_table=11
/product="plasmid stabilization system"
/protein_id="YP_002891257.1"
/db_xref="GI:237806817"
/db_xref="InterPro:IPR007712"
/db_xref="GeneID:7883921"
/translation="MESSISEMRYVFTDEAKADLIQIRRFTLKNWGQNQSVHYLQELQ
QTLSRLTIMPQMGICREQDLGNGIYSFPYASHTIYYTLLNEQLIVMAVLHQSMVPDSH
LENRKVKI"
misc_feature 50652..50942
/locus_tag="Tola_0041"
/note="Plasmid stabilization system protein [General
function prediction only]; Region: ParE; COG3668"
/db_xref="CDD:33466"
gene 51060..52019
/locus_tag="Tola_0042"
/db_xref="GeneID:7883922"
CDS 51060..52019
/locus_tag="Tola_0042"
/inference="protein motif:PFAM:PF00753"
/note="PFAM: beta-lactamase domain protein;
KEGG: mxa:MXAN_0965 hypothetical protein"
/codon_start=1
/transl_table=11
/product="beta-lactamase domain-containing protein"
/protein_id="YP_002891258.1"
/db_xref="GI:237806818"
/db_xref="InterPro:IPR001279"
/db_xref="GeneID:7883922"
/translation="MRYTNQDGSQRSFPLKHVLRRQTGWHGERQPRSGRTGIPVPIVH
NDGADLHHQQHDTLTWIGHSSFLLQLGGLNMLIDPVMSSSLGGVVPRNAPPGLSWSAL
PKKIDVVMITHNHRDHMDVPTLKKLGPNPLYLVPHGMRHWFLKNGFPHVQELAWWQQT
QVGNATMTFVPAQHWSRRGLMDMNTSWWGGFVMEHDGFRLYHAGDTAWFDGFREIGRR
CGPIDVAMLPIGAYAPRWFMRHQHMDPDDALKAFVALEAKLFVAMHWGTFKLTDEPLN
EPPIRLRDLWHKLQLPLARLAIPAIGQTLEFPRIDLSVALAVK"
misc_feature 51231..51986
/locus_tag="Tola_0042"
/note="Predicted Zn-dependent hydrolases of the
beta-lactamase fold [General function prediction only];
Region: COG2220"
/db_xref="CDD:32402"
gene complement(52148..54268)
/gene="malQ"
/locus_tag="Tola_0043"
/db_xref="GeneID:7883923"
CDS complement(52148..54268)
/gene="malQ"
/locus_tag="Tola_0043"
/EC_number="2.4.1.25"
/inference="protein motif:TFAM:TIGR00217"
/note="amylomaltase; acts to release glucose from
maltodextrins"
/codon_start=1
/transl_table=11
/product="4-alpha-glucanotransferase"
/protein_id="YP_002891259.1"
/db_xref="GI:237806819"
/db_xref="InterPro:IPR003385"
/db_xref="GeneID:7883923"
/translation="MDISVIEAAAKAAGIADSYISALGQPVQIAISTQEKILAALGHT
SPENNLLPAVSVFRQGELFRVLLQDAVTDTCHWRLQPESGKPLRGVLANGFLTLPDNL
PLGYHKLCLLQGRKVIAESRIIIAPARCYEPPAIQQGKKTWGACVQLYTLRSEENWGI
GDFADLKQMVTALAAQGADFVGLNPLHALYPASPDSASPYSPSSRRWLNIIYIAVHKL
PDFQLSSAAQLWWQNPEIQQQLQAARASDYVDYPQVTALKLAGLKLAYQYFASLPDDI
PRVGEFEQFRRQQGESLQQQATYDALHAWLKQQDEHAWGWPAWPAEYQQWESPALQLF
RQEHADEIRFYAWLQWLTQGQLQECQQSARDAGMLIGIYRDLAVGVTEGGTETWCDRE
LYCLKASVGAPPDILGPLGQNWGLPPMSPQVMRQRGYQPFIDLIQSNMKACGALRIDH
VMGLLRLWWVPQGSTAVEGAFVSYPVDDLLAILALESQRHQCMVIGEDLGTVPDEIVA
KLRDNGVYSYKVFYFERAPAPDSGFYSPRDYPAQAMTTLSTHDMPTLYGYWQADDLTL
GQKLGLYPDAEVLSGLYADREQAKQRMLDSLHSLHSLPEEYSRQAQGMMMNPALNRGI
HCHVAQSNSALLGLQPEDWLNMTMPVNIPGTTHEIYPNWRRKLSCTLEAMFNDSDVIS
LLAEINRRRRQLYPNNLELQVGGK"
misc_feature complement(52190..54268)
/gene="malQ"
/locus_tag="Tola_0043"
/note="4-alpha-glucanotransferase; Provisional; Region:
malQ; PRK11052"
/db_xref="CDD:182928"
misc_feature complement(52184..53881)
/gene="malQ"
/locus_tag="Tola_0043"
/note="4-alpha-glucanotransferase [Carbohydrate transport
and metabolism]; Region: MalQ; COG1640"
/db_xref="CDD:31827"
gene complement(54278..56713)
/locus_tag="Tola_0044"
/db_xref="GeneID:7883924"
CDS complement(54278..56713)
/locus_tag="Tola_0044"
/EC_number="2.4.1.1"
/inference="protein motif:TFAM:TIGR02093"
/note="KEGG: ypb:YPTS_3971 glycogen/starch/alpha-glucan
phosphorylase;
TIGRFAM: glycogen/starch/alpha-glucan phosphorylase;
PFAM: glycosyl transferase family 35"
/codon_start=1
/transl_table=11
/product="glycogen/starch/alpha-glucan phosphorylase"
/protein_id="YP_002891260.1"
/db_xref="GI:237806820"
/db_xref="InterPro:IPR000811"
/db_xref="InterPro:IPR011833"
/db_xref="GeneID:7883924"
/translation="MTIKKQSKKPALFSAAEFEAALTRQWQRLGLQSATEMTPYQWWL
AVSAAVNEQVAARRTEGQLRAATGAERHVNYLSLEFLVGRLTLNNLISLDCADVVADV
VRKYGRELTDLLEQEVDPGLGNGGLGRLAACFLDSMAAVDQPAIGYGLSYQYGLFRQS
FRNGEQQEAPDDWHSEHYPWLTRHTGLTLPVGFGGEVRTDDEDRQYWVPALVVQGEAH
DLPILGYHNQVVQTLRLWHASHPTPLDLQKFNDGEYLQAVDAGVTASKLSKVLYPSDN
HQPGKELRLMQQYFHCACSIADILHRHLAAGRTLLSLPDYEVIQLNDTHPTIAIPELM
RVLLDDHQMCWEDAWSICTRLFAYTNHTLLPEALECWPQDLVATLLPRHFYIIDEIDR
RFMAQAQQQWPDNEDVWQKVAVIYDGQIRMANLCVVTCFAVNGVAQLHSDLVKSDLFP
EYNDLWPHKFHNVTNGITPRRWLKQCNPDLATLLDETLKVDWARDLDTLRDLEPFAAK
TDFRHRYRDIKFANKQRLADYVWQTQGIKLDPHAIFDVQIKRLHEYKRQHLNLLQIIA
RYQQLRAQPNLAVPPRVFLFAAKAAPGYHLAKNIILAINKVAERINNDPFVNDKLKVV
FLPDYRVTMAELLIPAADVSEQISTAGKEASGTGNMKLAMNGALTVGTLDGANVEISE
QVGRDNLFIFGHTVDEVKAMLAAGYQPQHYYQQNPRLKAALDELMSGYYTPDNTQALQ
PLWHSLLEGGDPYLVLADFDAYWEAQQQVDALYQQPEEWLRRCILNTARTGMFSSDRS
IRDYQRQIWQPAV"
misc_feature complement(54287..56647)
/locus_tag="Tola_0044"
/note="maltodextrin phosphorylase; Provisional; Region:
PRK14985"
/db_xref="CDD:184947"
misc_feature complement(54290..56617)
/locus_tag="Tola_0044"
/note="This is a family of oligosaccharide phosphorylases.
It includes yeast and mammalian glycogen phosphorylases,
plant starch/glucan phosphorylase, as well as the
maltodextrin phosphorylases of bacteria. The members of
this family catalyze the breakdown of...; Region:
GT1_Glycogen_Phosphorylase; cd04300"
/db_xref="CDD:99996"
misc_feature complement(order(54731..54733,54740..54751,54755..54757,
54821..54826,54926..54928,54932..54934,54947..54949,
55049..55060,55064..55069,55298..55300,55319..55321,
55616..55618,55628..55633,55739..55741,55745..55747,
55862..55864,55883..55885,55889..55891,55898..55900,
56333..56341,56471..56473,56477..56479))
/locus_tag="Tola_0044"
/note="active site pocket [active]"
/db_xref="CDD:99996"
gene 56970..59690
/locus_tag="Tola_0045"
/db_xref="GeneID:7883925"
CDS 56970..59690
/locus_tag="Tola_0045"
/inference="protein motif:PFAM:PF00196"
/note="Positively regulates the transcription of the
maltose regulon whose gene products are responsible for
uptake and catabolism of malto-oligosaccharides"
/codon_start=1
/transl_table=11
/product="transcriptional regulator MalT"
/protein_id="YP_002891261.1"
/db_xref="GI:237806821"
/db_xref="InterPro:IPR000792"
/db_xref="GeneID:7883925"
/translation="MLIPSKLSRPVRLQNAITRERLLQRLQTALDYRLVLLHGPAGYG
KTTLIAQWAATLPHVGWFSLDDSDNQPERFARYLVAALQHATGGHCVKSESLSQKHQY
ARLSSLLGQVFAELADWTEPTYLIIDDYHLIDNEEIHEAMRFFLRNQPDNLTLVVISR
ALPPLGIANLRVREQLLELDNQLLAFNHQEAQQFFCNRLTTPMDEQESATLCDEVEGW
ATALQLIALSSPDSRSTVHQSARKLSGLNTTYLWEYLAEEVMDRIDAPTRDFLLRCSV
LRSMNDSLVAKLTGRQDGLAQLGELERRGLFVQRMDMDGDTIWFRFHPLFASFLQHCC
LQQLAAELPELHRRAAAGWQALNIPSEAIHHALAASDALLLREILLQYGWSLFHHGEL
ALLSGCLEALPYDELIQSPNLVLLQAWLAQSQHRYTQVDALLERAKQAMAEHQVRLND
ALQGEFNALRAQVALNANQPEEAIHLAREALQQLPPTNFYGRIVATSVIGEVHHYLGQ
LSSALPMMQRTEQMARRHGTYHYALWALLQQSEILIAQGFLQAAYEVQDKALELVQNQ
HLEQLPLHEFLLRIRAQVLWSWYRLDEAESCARQGLQVLAGYEQKQQLQCVAMLAKVS
LARGDIDNASQHLQRCEVLLHNADYHSDWINNADIPRLLYWQMTGDKQSVRNWLAQAE
RPDAACNHFLQGQWRNIARAHLILEENDLAAEILQHLNEEARRLNLYSDLNRNLLLCT
VLHWQCDERSEAQRTLMEALTLSNRTGFVSHFVIEGEIVAQLLRQLLQLNTLSEMEQH
KAQRLLKDINQHHRHKFAHFDEGFVEKLLNHPNVPELIRTSPLTQREWQVLGLIYSGY
SNEQIAVELDVAATTIKTHIRNLYQKLGILHRQDAVEQAQKLLKLMGYGV"
misc_feature 56970..59684
/locus_tag="Tola_0045"
/note="transcriptional regulator MalT; Provisional;
Region: PRK04841"
/db_xref="CDD:179885"
misc_feature 57024..57437
/locus_tag="Tola_0045"
/note="AAA ATPase domain; Region: AAA_16; pfam13191"
/db_xref="CDD:205372"
misc_feature 59490..59645
/locus_tag="Tola_0045"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(59493..59501,59538..59546,59568..59573,59577..59582,
59586..59600,59631..59633)
/locus_tag="Tola_0045"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(59526..59528,59532..59534,59538..59540,59631..59639)
/locus_tag="Tola_0045"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(59739..60653)
/locus_tag="Tola_0046"
/db_xref="GeneID:7883926"
CDS complement(59739..60653)
/locus_tag="Tola_0046"
/inference="protein motif:PFAM:PF00480"
/note="PFAM: ROK family protein;
KEGG: yen:YE3185 fructokinase"
/codon_start=1
/transl_table=11
/product="ROK family protein"
/protein_id="YP_002891262.1"
/db_xref="GI:237806822"
/db_xref="InterPro:IPR000600"
/db_xref="GeneID:7883926"
/translation="MRIGIDLGGTKIEVIALDSDGGELFRKRVPTPRHDYQQTLEAIT
GLVLDAEAATGKKGSVGLGIPGTISPFTGKVKNANSTWLNGQPLDKDLEAMLDRPVRI
ANDANCLAVSEATDGAGAGGKLVFAVIIGTGCGSGIAINSHVHAGGNGIAGEFGHNPL
PWIDEEEWNYQNATPCYCGKKGCIETYVSGTGFANSYKFNTGKELKGAEIMALVAQGD
AAAIKAIEDYERRLAKALAHAVNLMDPDVIVLGGGMSNVERIYDNLPRLMKEYVFGGE
CETPVRKALHGDSSGVRGAAWLWQRDDL"
misc_feature complement(59751..60653)
/locus_tag="Tola_0046"
/note="fructokinase; Reviewed; Region: PRK09557"
/db_xref="CDD:181951"
misc_feature complement(60198..60647)
/locus_tag="Tola_0046"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cd00012"
/db_xref="CDD:212657"
misc_feature complement(order(60258..60269,60339..60341,60615..60617,
60621..60623,60627..60638))
/locus_tag="Tola_0046"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
gene 60767..61507
/locus_tag="Tola_0047"
/db_xref="GeneID:7883927"
CDS 60767..61507
/locus_tag="Tola_0047"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; transcriptional
regulator domain protein;
SMART: response regulator receiver;
KEGG: spe:Spro_1035 two component transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="two component transcriptional regulator, winged
helix family"
/protein_id="YP_002891263.1"
/db_xref="GI:237806823"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:7883927"
/translation="MKNKILVVDDDIAICELLTDVLSEHVFEVRSCHLAQAALQTLQQ
EPDIALVLLDLMLPDMSGLLLLQQIRMQFPDLPVIMLTGLATESDMVVGLEMGADDYI
AKPFVPRIVVARAKAVLRRTPVSDNPQRRIAVPISGPGFRFDGWLLNTHTGRLHTPDG
DDIELTQGEYSLLTVLLKNARKVLTRDQLLEMTHSDALDVFDRTIDVLIMRLRRKIEP
NPKQPEYIRTIRGAGYVMSREVTVVHKA"
misc_feature 60773..61471
/locus_tag="Tola_0047"
/note="osmolarity response regulator; Provisional; Region:
ompR; PRK09468"
/db_xref="CDD:181883"
misc_feature 60782..61123
/locus_tag="Tola_0047"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(60791..60796,60926..60928,60950..60952,61010..61012,
61067..61069,61076..61081)
/locus_tag="Tola_0047"
/note="active site"
/db_xref="CDD:29071"
misc_feature 60926..60928
/locus_tag="Tola_0047"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(60935..60940,60944..60952)
/locus_tag="Tola_0047"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 61076..61084
/locus_tag="Tola_0047"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 61190..61474
/locus_tag="Tola_0047"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature order(61262..61264,61319..61324,61376..61378,61385..61387,
61409..61414,61448..61450,61463..61465)
/locus_tag="Tola_0047"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene complement(61508..62533)
/locus_tag="Tola_0048"
/db_xref="GeneID:7883928"
CDS complement(61508..62533)
/locus_tag="Tola_0048"
/inference="protein motif:PFAM:PF00294"
/note="PFAM: PfkB domain protein;
KEGG: spe:Spro_1034 ribokinase-like domain-containing
protein"
/codon_start=1
/transl_table=11
/product="PfkB domain-containing protein"
/protein_id="YP_002891264.1"
/db_xref="GI:237806824"
/db_xref="InterPro:IPR011611"
/db_xref="GeneID:7883928"
/translation="MNAPRCGILAAGTMLVDHVHLIDDWPEQGRLATILHTENATGGA
VPNVLRTLARMKTGLPLAAAGLVGDDLDGEFIRQCLSDDDIDCRWLQTAALPTSMTQV
MTNQRNGQRTFFHAHGSNAAFDAHILEGLHSPHKIVHLAYLLLLQQLEKPDPEYGVVA
ARLFHQLQQKGYLTALDLVSIDDPERAKRVVLPALPYVDYLIINELEAATLTGQPLRT
SEGKPDLIQIPHAAKNLLQQGVRQVVVIHCPEGAWAENTNGDSLFTPSYWIEPQEIAG
TVGAGDAFCAGVLYGLHQQWGLLETLQLGNACARFNLRSTNAIDGAAPLGELQAFIAA
QTAGNKG"
misc_feature complement(61571..62515)
/locus_tag="Tola_0048"
/note="Adenosine kinase (AK) catalyzes the phosphorylation
of ribofuranosyl-containing nucleoside analogues at the
5'-hydroxyl using ATP or GTP as the phosphate donor.The
physiological function of AK is associated with the
regulation of extracellular adenosine...; Region:
adenosine_kinase; cd01168"
/db_xref="CDD:29352"
misc_feature complement(61529..62512)
/locus_tag="Tola_0048"
/note="Sugar kinases, ribokinase family [Carbohydrate
transport and metabolism]; Region: RbsK; COG0524"
/db_xref="CDD:30870"
misc_feature complement(order(61688..61690,61697..61702,61988..61990,
62108..62110,62183..62185,62189..62191,62195..62197,
62234..62236,62393..62395,62402..62410,62483..62485,
62489..62491,62495..62497))
/locus_tag="Tola_0048"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29352"
misc_feature complement(order(61595..61597,61607..61609,61682..61684,
61691..61696,61703..61705,61712..61714,61736..61738,
61778..61780,61787..61792,61796..61798))
/locus_tag="Tola_0048"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29352"
gene complement(62533..63393)
/locus_tag="Tola_0049"
/db_xref="GeneID:7883929"
CDS complement(62533..63393)
/locus_tag="Tola_0049"
/inference="protein motif:TFAM:TIGR00167"
/note="KEGG: ent:Ent638_0285 hypothetical protein;
TIGRFAM: ketose-bisphosphate aldolase;
PFAM: ketose-bisphosphate aldolase class-II"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891265.1"
/db_xref="GI:237806825"
/db_xref="InterPro:IPR000771"
/db_xref="GeneID:7883929"
/translation="MPLISLAQGLSHARAHGYALGAFNVLDTHFLRALFAAAKAQRSP
FIINIAEVHFKYVSLEAICAAIKAEAALHDIPVVLNLDHGTSFDAVMKAIRLGFTSVM
FDGSGLSYEENIRQTAEVVKMCHALDISVEAELGAVGGDEGGSLYGSCDSSKFTDPSK
ATDFVTRTGIDALAVAIGNAHGKYRGEPKLDFPRLQAIQEQTGLPLVLHGGSGISDAD
FRKAISLGIHKINFYTGMSQNALVAVEQAMQHRETAYDELAHMLMGIEAAIQKTVEEQ
MQIFGSAGKA"
misc_feature complement(62542..63378)
/locus_tag="Tola_0049"
/note="Tagatose-1,6-bisphosphate (TBP) aldolase and
related Type B Class II aldolases. TBP aldolase is a
tetrameric class II aldolase that catalyzes the reversible
condensation of dihydroxyacetone phosphate with
glyceraldehyde 3-phsophate to produce tagatose 1; Region:
TBP_aldolase_IIB; cd00947"
/db_xref="CDD:29573"
misc_feature complement(62536..63366)
/locus_tag="Tola_0049"
/note="hypothetical protein; Provisional; Region:
PRK08185"
/db_xref="CDD:181275"
misc_feature complement(order(62650..62652,62659..62661,62671..62673,
62680..62685,62689..62694,62968..62970,63187..63192,
63199..63201,63211..63213,63223..63231,63238..63240,
63298..63300,63307..63315))
/locus_tag="Tola_0049"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:29573"
misc_feature complement(order(62692..62697,62701..62703,62758..62760,
62764..62769,62842..62844,62848..62856,63145..63150))
/locus_tag="Tola_0049"
/note="active site"
/db_xref="CDD:29573"
misc_feature complement(order(62767..62769,62851..62853,63145..63147))
/locus_tag="Tola_0049"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:29573"
misc_feature complement(order(62758..62760,62764..62766,62842..62844,
62848..62850,62854..62856))
/locus_tag="Tola_0049"
/note="Na+ binding site [ion binding]; other site"
/db_xref="CDD:29573"
gene complement(63406..64095)
/locus_tag="Tola_0050"
/db_xref="GeneID:7883930"
CDS complement(63406..64095)
/locus_tag="Tola_0050"
/inference="protein motif:PFAM:PF07385"
/note="PFAM: protein of unknown function DUF1498;
KEGG: yps:YPTB3804 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891266.1"
/db_xref="GI:237806826"
/db_xref="InterPro:IPR010864"
/db_xref="GeneID:7883930"
/translation="MRRSQLNEILADSQALFAQHQIYLPPFAHFTPQDWTTQDLTRFQ
EVFDLQLGWDVTDMGSNDFANTGLTLFTLRNGSVGGKPYPKPYAEKIMISREGQQTPL
HFHWYKMEDIIHRGGGNMIIELYNRTADEQCDTTDVEVVLDGERQRHKAGSRLRLTAG
QSISLTQGLYHSFWAEPGHGPVILGEVSMVNDDRRDNRFLRPQSRFSEIEEDTDPLHL
LCNEYARFLPL"
misc_feature complement(63418..64095)
/locus_tag="Tola_0050"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:212615"
gene complement(64096..65541)
/locus_tag="Tola_0051"
/db_xref="GeneID:7883931"
CDS complement(64096..65541)
/locus_tag="Tola_0051"
/inference="protein motif:TFAM:TIGR01312"
/note="TIGRFAM: xylulokinase;
PFAM: carbohydrate kinase FGGY;
KEGG: ent:Ent638_0157 xylulokinase"
/codon_start=1
/transl_table=11
/product="xylulokinase"
/protein_id="YP_002891267.1"
/db_xref="GI:237806827"
/db_xref="InterPro:IPR000577"
/db_xref="InterPro:IPR006000"
/db_xref="GeneID:7883931"
/translation="MFLGIDLGTSSLKVVLLDNNEKLIDSVSMPLSVQHPQPGFSEQH
PDDWWQALQQAMLQFKKRQAAALQQVRAIGFSGQMHGATLLDERGSVLRPCILWNDGR
SAEECRWLEQRADFIGITGNRVMAGFTAPKLLWVQRHEPDIFARTAHILLPKDYLRYR
MSGDFASDMADSAGTLWLDTARRQWSEELLVACNLTVNQMPELYEGNQVTGTLYDTLA
DDWGLPRNTPLIAGAGDNAASAIGLGVLKAGDGFVSLGTSGVIFVAADQHYANPQQAV
HSFCHALPERWHQMAVTLSAAASLSWFSRLTSTPEAQLAQEAEQHDAGDVLFAPFLNG
ERTPWNAPHVRGAFFGLADQHQRGHLARAVMEGVAFSLADGYRALQQAGCAPHQMIAT
GGGARSQFWLQMIADLTQCRIIVPTYADVGAAFGAARLARLAIEPEALSHLTSHAVPA
TAIIRPQSQPDLQARYQRYQQLTRWLCQQEG"
misc_feature complement(64126..65541)
/locus_tag="Tola_0051"
/note="Escherichia coli xylulokinase-like D-xylulose
kinases; a subgroup of the FGGY family of carbohydrate
kinases; Region: FGGY_D-XK_EcXK-like; cd07808"
/db_xref="CDD:198374"
misc_feature complement(order(64198..64203,64237..64278,64672..64674,
64681..64692,64696..64713,64726..64728,64732..64734,
64738..64740,64756..64758,64762..64764,64786..64788,
64792..64794,64810..64839,64846..64848,64852..64854,
64915..64917,64921..64929,64993..64995,65002..65004,
65020..65025,65032..65037,65158..65160,65167..65169,
65173..65184,65191..65193,65317..65328,65479..65481,
65491..65493,65497..65499,65503..65505,65524..65538))
/locus_tag="Tola_0051"
/note="N- and C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:198374"
misc_feature complement(64126..65535)
/locus_tag="Tola_0051"
/note="D-xylulose kinase; Region: XylB; TIGR01312"
/db_xref="CDD:162297"
misc_feature complement(order(64348..64350,64357..64365,64600..64602,
64606..64611,64639..64644,64648..64653,64672..64674,
64771..64779,64834..64839,65248..65250,65302..65310,
65503..65505,65509..65520,65524..65526))
/locus_tag="Tola_0051"
/note="active site"
/db_xref="CDD:198374"
misc_feature complement(order(64348..64350,64357..64365,64600..64602,
64606..64611,64639..64644,64648..64653,64771..64779,
64837..64839,65503..65505,65509..65520,65524..65526))
/locus_tag="Tola_0051"
/note="MgATP binding site [chemical binding]; other site"
/db_xref="CDD:198374"
misc_feature complement(order(64837..64839,65515..65517,65524..65526))
/locus_tag="Tola_0051"
/note="catalytic site [active]"
/db_xref="CDD:198374"
misc_feature complement(order(64837..64839,65524..65526))
/locus_tag="Tola_0051"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:198374"
misc_feature complement(order(64672..64674,64834..64839,65248..65250,
65302..65310))
/locus_tag="Tola_0051"
/note="xylulose binding site [chemical binding]; other
site"
/db_xref="CDD:198374"
misc_feature complement(order(64462..64464,64471..64479,64489..64512,
64624..64629,64636..64638))
/locus_tag="Tola_0051"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:198374"
gene complement(65651..66592)
/locus_tag="Tola_0052"
/db_xref="GeneID:7883932"
CDS complement(65651..66592)
/locus_tag="Tola_0052"
/inference="protein motif:PFAM:PF00532"
/note="PFAM: periplasmic binding protein/LacI
transcriptional regulator;
KEGG: ecs:ECs5071 putative carbohydrate binding protein"
/codon_start=1
/transl_table=11
/product="periplasmic binding protein/LacI transcriptional
regulator"
/protein_id="YP_002891268.1"
/db_xref="GI:237806828"
/db_xref="InterPro:IPR001761"
/db_xref="GeneID:7883932"
/translation="MRLNKLMSTLVAAAVITTAPLAQAKDLKSIGVTVGDLANPFFVQ
ITKGAEMKARELAGQDVKVTLVSSGYDLGQQVTQIDNFIAAGVDMIVLNAADSKGIAP
AVKRAQQAGIVVVAVDVAAEGADATVTSNNTQAGELGCQYIADKLQGRGDVVIINGPP
VSAVTNRVDGCMTTLNKYKDIKVLSSNQNGKGSREGGLEVMTSLLAAHPKIDAVFAIN
DPTGIGADLAAKQAQRSEFFIVGVDGSPDAEEALKRDNNLFVATPAQDPQVMASRAVE
IGYDILQGKPAPKEPVLIPVTMIDRNNVKDYKGWTVK"
misc_feature complement(65654..66592)
/locus_tag="Tola_0052"
/note="ABC-type sugar transport system, periplasmic
component [Carbohydrate transport and metabolism]; Region:
RbsB; COG1879"
/db_xref="CDD:32063"
misc_feature complement(65693..66508)
/locus_tag="Tola_0052"
/note="Periplasmic sugar-binding domain of uncharacterized
ABC-type transport systems; Region:
PBP1_ABC_sugar_binding_like_11; cd06321"
/db_xref="CDD:107316"
misc_feature complement(order(65798..65800,65864..65866,66092..66094,
66239..66241,66470..66472))
/locus_tag="Tola_0052"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107316"
gene complement(66666..67667)
/locus_tag="Tola_0053"
/db_xref="GeneID:7883933"
CDS complement(66666..67667)
/locus_tag="Tola_0053"
/inference="protein motif:PFAM:PF02653"
/note="PFAM: inner-membrane translocator;
KEGG: kpe:KPK_5180 putative ribose ABC transporter,
permease protein"
/codon_start=1
/transl_table=11
/product="inner-membrane translocator"
/protein_id="YP_002891269.1"
/db_xref="GI:237806829"
/db_xref="InterPro:IPR001851"
/db_xref="GeneID:7883933"
/translation="MSNAMSTPNTHTAATSPEKKFTLHSVIQSVGILPVLILIFIGFS
LMTPNFATESNIMNIVRQSSINTVLAAGMTFVIITGGIDLSVGSILGATAVMAMVTSL
SPELGLLSIPVALMGGLLMGTLNGVMVAYIGLPPFIATLGTYTALRGAAYLLADGTTV
INNDISFEWIGNAYLGPIPWLVVIGFVVIGICWFILRKTTLGMHVYAVGGNANAARLT
GIKVGLVLTFVYAMSGLMAGLGGIMSASRLYSANGNLGVGYELDAIAAVVLGGTSLSG
GIGSITGTLIGALIIAAMNNGMTLMGVSYFWQLVIKGCVIIIAVLIDKYRTRKHAGA"
misc_feature complement(66699..67481)
/locus_tag="Tola_0053"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature complement(66975..67031)
/locus_tag="Tola_0053"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene complement(67681..69204)
/locus_tag="Tola_0054"
/db_xref="GeneID:7883934"
CDS complement(67681..69204)
/locus_tag="Tola_0054"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter related;
SMART: AAA ATPase;
KEGG: ent:Ent638_0289 ABC transporter related"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002891270.1"
/db_xref="GI:237806830"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7883934"
/translation="MSDKQPILEMRNIAKRFGQFYALKDVSLTIYPGEVHSLMGENGA
GKSTLMKILAGAYTATAGEIFIDGKPFTINGPKDALNAGITLIYQEINLAPNLTVAEN
IFLGSELTRNGMVNRQKMEEETQIVLDRLAARFKASAKVSNLSIAEQQQVEIARALHR
KSRVLVMDEPTAALSSRETDMLFALIKKLRSEGMAIIYISHRMAEIYELSDRVSVLRD
GQYIGSLMRSELSASELVRMMVGRPLNDLFNKDRTIPKGDMVLECQDLTDEDKVLSGT
LNVRAGEIIGLSGLVGAGRSELAQMIFGARKVASGEIKLRGKPLEIRNPRDAIDCGIG
FLTENRKEQGLFLEMTVHDNIVMATIERDSKFGVLSEQKNRAISDTAIKTLNIRVPHS
QVAAGSLSGGNQQKLLISRWVAIHPKLLILDEPTRGVDVGAKSEIYRMMTDMARKGVA
ILMISSELPEIVGMSDRVYVMRAGSIVGELDGEAITQENIMELATGATHHIAGTAVA"
misc_feature complement(67726..69204)
/locus_tag="Tola_0054"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:31325"
misc_feature complement(68533..69183)
/locus_tag="Tola_0054"
/note="This family represents the domain I of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses...; Region: ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:72975"
misc_feature complement(69064..69087)
/locus_tag="Tola_0054"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72975"
misc_feature complement(order(68602..68604,68698..68703,68938..68940,
69061..69069,69073..69078))
/locus_tag="Tola_0054"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72975"
misc_feature complement(68938..68949)
/locus_tag="Tola_0054"
/note="Q-loop/lid; other site"
/db_xref="CDD:72975"
misc_feature complement(order(68746..68763,68905..68916))
/locus_tag="Tola_0054"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72975"
misc_feature complement(68698..68715)
/locus_tag="Tola_0054"
/note="Walker B; other site"
/db_xref="CDD:72975"
misc_feature complement(68680..68691)
/locus_tag="Tola_0054"
/note="D-loop; other site"
/db_xref="CDD:72975"
misc_feature complement(68596..68616)
/locus_tag="Tola_0054"
/note="H-loop/switch region; other site"
/db_xref="CDD:72975"
misc_feature complement(67777..68436)
/locus_tag="Tola_0054"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene 69362..71980
/locus_tag="Tola_0055"
/db_xref="GeneID:7883935"
CDS 69362..71980
/locus_tag="Tola_0055"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
response regulator receiver; histidine kinase HAMP region
domain protein; histidine kinase A domain protein;
SMART: ATP-binding region ATPase domain protein; histidine
kinase A domain protein; response regulator receiver;
histidine kinase HAMP region domain protein;
KEGG: spe:Spro_1028 multi-sensor hybrid histidine kinase"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_002891271.1"
/db_xref="GI:237806831"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:7883935"
/translation="MPSLSSRRKPLFSGVRGRLLSFNLLVVSLTLAIGIIAVFGFNNA
GRLLTEMQESTLSEMNSGMEVGVKTAKVATVAVSLTQVIGAMEYQSESDLLKTSLQGL
RDSLAKMAAAPLAQQQPQLINSIHTRSDELQESVRRLLDLTRTRHLERHDLLGVIYQA
QSQLELLAKDNGAGWPTALEQTLFANMLEMTLTIPASPDVLTQLSLLRQRWQQMIPQV
DSARQRILLELCNTLQPVDELNQKLQNSDLAIAYHTFRIKALVNLLDQDINQYVQLVV
HSASSRAELTHNKLQTSTFTIEIFGLLAVIITALAGNYIYDNMGVLVSAIADAMTRLS
KGERTVKVPALNRQDELGDLARAFNVFANNAASLARVTKLFKEKSIQLETTFLSIRDG
FALFDAEGALIVCNPQYASLLQLDQIAHGSHFREVLQRLQQNGAQRSDGKPLSPDHLW
RAEDNVLTLELQLAGERYVELRLNRLADMSMASMVLDRTDRKILEAELIHSQKMKAVG
HLTGGIAHDFNNLLAVILGNLELLLTDDDALAERTRQRIERAYKATERGAQLTQRLLA
FSRKQALRPRAIDLAELVTNLRELMEHSLPASLRLELDIQSELRPAWMDANQLENSLL
NLVVNARDAMEGRSGVIRIRLFNQRVQRTSGRVQDMVTVEVIDQGCGMTPEVLQRVFE
PFFTTKVAGKGSGLGLSMVYGFVRQSGGRVQIDSEPERGTCVRLQLPCAEAEPIALPS
ATVSAPVWSDDEMPLVVVLEDQADVRQTLCEYLHSMGCLTMDTDCSEQALSWVRTIPE
VQLLISDIVLPGQASGIEVVQQAQQLRRDIKLLLVSGHDFSEQAASQSWPLLIKPYTR
ADLVTQLTRLWQKKTA"
misc_feature 70523..71548
/locus_tag="Tola_0055"
/note="Signal transduction histidine kinase, nitrogen
specific [Signal transduction mechanisms]; Region: NtrB;
COG3852"
/db_xref="CDD:33642"
misc_feature 70871..71068
/locus_tag="Tola_0055"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(70889..70891,70901..70903,70913..70915,70922..70924,
70934..70936,70943..70945,70997..70999,71009..71011,
71018..71020,71030..71032,71039..71041,71051..71053)
/locus_tag="Tola_0055"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 70907..70909
/locus_tag="Tola_0055"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 71216..71545
/locus_tag="Tola_0055"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(71234..71236,71246..71248,71255..71257,71354..71356,
71360..71362,71366..71368,71372..71377,71444..71455,
71501..71503,71507..71509,71522..71527,71531..71533)
/locus_tag="Tola_0055"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 71246..71248
/locus_tag="Tola_0055"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(71366..71368,71372..71374,71444..71446,71450..71452)
/locus_tag="Tola_0055"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 71609..71962
/locus_tag="Tola_0055"
/note="FOG: CheY-like receiver [Signal transduction
mechanisms]; Region: CheY; COG0784"
/db_xref="CDD:31127"
misc_feature 71630..71959
/locus_tag="Tola_0055"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(71639..71644,71774..71776,71801..71803,71861..71863,
71915..71920)
/locus_tag="Tola_0055"
/note="active site"
/db_xref="CDD:29071"
misc_feature 71774..71776
/locus_tag="Tola_0055"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(71783..71788,71792..71794,71798..71803)
/locus_tag="Tola_0055"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 71915..71923
/locus_tag="Tola_0055"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 72198..72446
/locus_tag="Tola_0056"
/db_xref="GeneID:7883936"
CDS 72198..72446
/locus_tag="Tola_0056"
/inference="similar to AA sequence:KEGG:ASA_1294"
/note="KEGG: asa:ASA_1294 outer membrane lipoprotein"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein"
/protein_id="YP_002891272.1"
/db_xref="GI:237806832"
/db_xref="GeneID:7883936"
/translation="MNKYQVLLGTIALSSTLLVGCANTSKVESDVQTLTGKVDQLATE
IGSIKDGQSKLAADVADAKAEAARANARLDNLATSYKK"
misc_feature 72198..>72344
/locus_tag="Tola_0056"
/note="Murein lipoprotein [Cell envelope biogenesis, outer
membrane]; Region: COG4238; cl11539"
/db_xref="CDD:187093"
gene complement(72691..73614)
/locus_tag="Tola_0057"
/db_xref="GeneID:7883937"
CDS complement(72691..73614)
/locus_tag="Tola_0057"
/inference="protein motif:PFAM:PF03734"
/note="PFAM: ErfK/YbiS/YcfS/YnhG family protein;
KEGG: aha:AHA_3584 LysM domain-containing protein"
/codon_start=1
/transl_table=11
/product="ErfK/YbiS/YcfS/YnhG family protein"
/protein_id="YP_002891273.1"
/db_xref="GI:237806833"
/db_xref="InterPro:IPR005490"
/db_xref="GeneID:7883937"
/translation="MNIMRNAMPALLCGLMLTSLSASAIEYELPEANSRLVGQNVEYV
VPADSKQPLEAIAAKYQIGLSGMMEANPGVDPYLPHPGSTLVIPHQLILPDTPRQGIV
INVAEMRLYYYPKGKNTVEVLPIGIGQLGTDTPENWVTSVQRKRANPTWTPTAKVRRE
YAEKGEPLPAVWPAGPDNPMGLFALYIGNLYAIHGTNAPFGIGLRVSHGCVRLRNDDI
EHLFNVVPVGTRVQFVNQPIKVTHEPDGLRYMEVHEPLSRTFEELSSKEPSTLTMSPA
VGRFIANADTDSHIVKQALEERSGMPTVINP"
misc_feature complement(72694..73605)
/locus_tag="Tola_0057"
/note="L,D-transpeptidase; Provisional; Region: PRK10190"
/db_xref="CDD:182294"
misc_feature complement(73354..73485)
/locus_tag="Tola_0057"
/note="Lysine Motif is a small domain involved in binding
peptidoglycan; Region: LysM; cd00118"
/db_xref="CDD:212030"
misc_feature complement(72922..73314)
/locus_tag="Tola_0057"
/note="L,D-transpeptidase catalytic domain; Region: YkuD;
pfam03734"
/db_xref="CDD:202749"
gene 73906..77298
/locus_tag="Tola_0058"
/db_xref="GeneID:7883938"
CDS 73906..77298
/locus_tag="Tola_0058"
/EC_number="3.1.11.5"
/inference="protein motif:TFAM:TIGR01450"
/note="KEGG: aha:AHA_3976 exodeoxyribonuclease V, gamma
subunit;
TIGRFAM: exodeoxyribonuclease V, gamma subunit;
PFAM: Exodeoxyribonuclease V RecC subunit"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease V subunit gamma"
/protein_id="YP_002891274.1"
/db_xref="GI:237806834"
/db_xref="InterPro:IPR002194"
/db_xref="InterPro:IPR006697"
/db_xref="GeneID:7883938"
/translation="MFRVYHSNQLDVLKSLLAHLIQLSPLQPALAAETILVQSPGMAQ
WLKQALAQDLGVAANITFPLPSSFIWQMFHQVLPEVPQENPYTKPAMLWRLMQLLPQC
MDDVLFAPLAGYLAEDHDGRRCYQLCQRIADLFDQYLVYRPDWIVDWESGGAQGAETQ
LWQPVLWRKLVALTEQQASHLHRVNLFSSFINTLKAGKPKAVLPQRLFVFGISSLPPH
YLEALMALGEHCEVHLLLTNPCRYYWGDLQEENQINQRVLNKLLAQRREQWQQAEQHK
PLLPETDWQQLFSDEGEQQGNPLLVSLGKQGRDYLSLLAEISAAEIDAFAEINGDSLL
HLLQQDLLELQDGTRLRPKRPISASDRSLVLHGCHSPLREVEVLHDQLLQRFAADPTL
TPKEVVVMVADINRYGPYVQAVFGNATGERYIPFSISDRSATQENPLLQSFLTLLSLP
DQRCTATELLELLAVPALLKRFGLAEADLTTLRRWAMESGVRWGLESGDGERFELPPR
ERHTWSFGLERMLLGFASGNETLFADVAPYTAIEGQNAVKLGQLARFIAQVMALRDEL
ETARPITEWQNLVDRLLLDFYLPQEQLEEDDAAALNLIRSTLQSWQQRLSQMQYQEPL
PLTVFHDHLQSELNAVRGGQQFLAGRVNFCTLMPMRAIPFRLVCLLGMNDGLYPRSMP
PLGFDLMADQPRKGDRSRREDDRYLFLEALLAAQQQLYISYVAHSAIDNRDLMPSVLV
TELVEYCQRAFLLPEDEEKAETEQETALHQHLLTGHPLVPYDRRYFSPTVPPATADLF
SYAAEWLPALTPTGQAGFFDARLSLPEELQGKPEIELADWLRFFRNPVAGFFRRRLRV
QFVEREAALEETEPFWLDKLQQYQLRERLLRYQRLDVDQAVWQARLLAEGMLPDGEFG
RLALQADAKNLAPLAAALQTWPLATAQRETFHLDFAGWQLLGSVGEVYAGQLVRHRVS
KLKASWLVAIWLEHLALSAAGKLTQPTRLLALDNGKLGEWLLAVLSADAAREQLLLWW
QAFTEGMQRPLCLPVNTAWQWLEKATTESGCLGDDAQQLQAREAAQKTYTGDGTFVSG
EGQDTYLARCFPELSSEYWEEIEEWAVQLLLPLRQHLQEAEA"
misc_feature 73906..77286
/locus_tag="Tola_0058"
/note="exonuclease V subunit gamma; Provisional; Region:
recC; PRK11069"
/db_xref="CDD:182943"
misc_feature 73909..77184
/locus_tag="Tola_0058"
/note="exodeoxyribonuclease V, gamma subunit; Region:
recC; TIGR01450"
/db_xref="CDD:162367"
gene 77295..80822
/locus_tag="Tola_0059"
/db_xref="GeneID:7883939"
CDS 77295..80822
/locus_tag="Tola_0059"
/EC_number="3.1.11.5"
/inference="protein motif:TFAM:TIGR00609"
/note="KEGG: spe:Spro_3814 exonuclease V subunit beta;
TIGRFAM: exodeoxyribonuclease V, beta subunit;
PFAM: UvrD/REP helicase"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease V subunit beta"
/protein_id="YP_002891275.1"
/db_xref="GI:237806835"
/db_xref="InterPro:IPR000212"
/db_xref="InterPro:IPR004586"
/db_xref="InterPro:IPR014016"
/db_xref="InterPro:IPR014017"
/db_xref="GeneID:7883939"
/translation="MSIPLDILTFPLGGLRLIEASAGTGKTYTIAGLYLRLLLGHGSG
DAAFGTPLPVDRILVVTFTEAATAELRQRILKAIRDTRRALEVGHSDDQLIQNLISEC
PDQKLALRQLLTAERQMDEAAIYTIHGFCQRMLTQNAFESGSLFDNEFLTEEQTLRAG
AVADFWRHITYQADALLAQALLDHWKGPEDLLREISPHLALSGLQCQPRTAETLAERH
QAIISRLNMFREAWQAAAGELESLISGSDVDKRSYSKKNLPNWLQKVGDWVNAPLSSY
SLPKELSRFAGNELAAKSKSGTVPSHPLFAQIETLLAQPNDIDDVVIADALTQVRARL
QQQKLRQQQLSFDDLLTNLARALNSERGVLLAERIREQYPVAMIDEFQDTDPLQYQIF
STLYAHNPECGFYMIGDPKQAIYAFRGADIFTYMQAKQQVAAHYTLQTNFRSTDELVT
AVNALFAHSGAPFIYQQDIPFEAVRAKGKKAGFVLQGLPQTALQCCFPLEGTGEVSGA
AYQQRMALAAAAQIHTWLVGAQQQQATLDGKPLRPNDIAVLVRSGREAAVMQQALREC
GIASVYLSNRESVFAQAVAQDVARLLEACLNPQDEMLIRAAMATGLQGWTVSQLARLN
DDETLWEQTVEHIRLAGELWRNRGILPMLRQWLFWYQIPERLLADTNGERQLTDVLHL
GELLQTAASTLNGEHALLRWLLERCHQPNGDADEQQLRLDSERQRVQIVTIHKSKGLQ
YGLVLLPFICAYRGNDMPRYHTGNGVQLDLTGSEHAWEKAAEERLAEDLRLLYVALTR
GVFVTWLGLADLKINSKTKAKDDRPAALDYLLKNDSDSALTVRFRQWLQQLNNHDRAA
EVAEIAFPQTPYHEISVPLPAPQARHFSGQLERNWRVTSYSALTVSHSTYQPTPPLPV
VVSDEEPQAPRFDVFSFPRGAHAGTFLHSLLEDLDFGADDAFCRKWITEHLQGVQLSH
DWQPEPWQPVLEQWLTQILNSELFPGLSLSQLTPQQCLSEMEFLLPLAPLSAPALNRC
LAAGDALSANAPPLAFNEVQGMLKGFIDLVFEHQGRFYVVDYKSNYLGDNPAAYQQDA
MAQAMLEHRYDVQYQLYTLALHRYLRCRLPDYDYERHIGGVCYLFLRGMNGDAGSGVY
ATKPDKQHIAALDALFAGQSEIGSGEFTV"
misc_feature 77307..80795
/locus_tag="Tola_0059"
/note="exonuclease V subunit beta; Provisional; Region:
recB; PRK10876"
/db_xref="CDD:182801"
misc_feature 77334..77534
/locus_tag="Tola_0059"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:205425"
misc_feature <80451..80693
/locus_tag="Tola_0059"
/note="CRISPR/Cas system-associated protein Cas4; Region:
Cas4_I-A_I-B_I-C_I-D_II-B; cl00641"
/db_xref="CDD:207146"
gene 80819..82717
/locus_tag="Tola_0060"
/db_xref="GeneID:7883940"
CDS 80819..82717
/locus_tag="Tola_0060"
/EC_number="3.1.11.5"
/inference="protein motif:TFAM:TIGR01447"
/note="KEGG: aha:AHA_3974 exodeoxyribonuclease V, alpha
subunit;
TIGRFAM: exodeoxyribonuclease V, alpha subunit;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease V subunit alpha"
/protein_id="YP_002891276.1"
/db_xref="GI:237806836"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR006344"
/db_xref="GeneID:7883940"
/translation="MTFTFPALTPCWQALLEARLLRDLDVQLAQLLARWDADESVQLA
VALTSQELGRGHVCFDLSTWPERLAQWQAQLSQAALSWPETTVAALDAKLQQSPLVRV
ITDPSDAEEQGQPLTLFAGRLYLSRYFRFEQQVACWLQQASLPADNAVNATELAAQLR
QLFTPQPETDWQAVAVATACEGRFTLISGGPGTGKTTTVTKLLALLVAQSEQSLLIRL
AAPTGKAAARLTESIAKAKTELATQVNADWLEGIPTQASTLHRLLGVIPGQPEFRHHA
QNPLPLDVLVVDEASMIDLPMMARLLAALPPQARLILLGDKDQLASVEAGAVLGDICR
FVAQGISQPQAECLQQRTGYDLQPYVQVTGHPLCDRLCLLRKSWRFAADSGIGKLAEA
VNNGDEKTAQAVWTRDYRDIRLHSDEQRLEMAVKLAAEGYHAYLALLDKPMSAEGAVA
LLQAFNQIRLLCALHDGPWGINGMNQAIGQRLQTQGRLQMTADWFAGRPVMITENDYG
LGLYNGDIGIAASDGERLRVWFVLPDGKAHGFLPSRLPAHDTAWAMTVHKSQGSEFTH
TLLLLPPETNPLLTRELLYTGITRAREQLDLFATPEVLALMVRKQTERYSGLVTMLET
MRALHDAE"
misc_feature 80894..82687
/locus_tag="Tola_0060"
/note="exonuclease V subunit alpha; Provisional; Region:
recD; PRK10875"
/db_xref="CDD:182800"
misc_feature 81332..>81820
/locus_tag="Tola_0060"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 82307..82609
/locus_tag="Tola_0060"
/note="Family description; Region: UvrD_C_2; pfam13538"
/db_xref="CDD:205716"
gene 82880..83773
/locus_tag="Tola_0061"
/db_xref="GeneID:7883941"
CDS 82880..83773
/locus_tag="Tola_0061"
/EC_number="1.5.1.20"
/inference="protein motif:TFAM:TIGR00676"
/note="KEGG: aha:AHA_3949 5,10-methylenetetrahydrofolate
reductase;
TIGRFAM: 5,10-methylenetetrahydrofolate reductase;
PFAM: methylenetetrahydrofolate reductase"
/codon_start=1
/transl_table=11
/product="5,10-methylenetetrahydrofolate reductase"
/protein_id="YP_002891277.1"
/db_xref="GI:237806837"
/db_xref="InterPro:IPR003171"
/db_xref="InterPro:IPR004620"
/db_xref="GeneID:7883941"
/translation="MSFDSARQVEALNQNLAELSGDINVSFEFFPPATESMEQTLWNS
IERLSKLKPSFVSVTYGANSGTRDRTHSIIKDIKERTGLVAAPHLTCVDATRDELRAI
AKDYWDNGIRNIVALRGDLPPGAGKPEMYANDLVALLKEVADFDISVAAYPEVHPEAK
SAQADLLHLKRKIDAGANRAITQFFFDVESYLRFRDRCAAIGIEAEIVPGILPVSNYK
NLLKFAGFTNVKIPQWLHQRFEGIADDDQMTRNMVGASIAIDMARVLSREGVKDFHFY
TLNRSELTYAICHTLGVRPKA"
misc_feature 82913..83755
/locus_tag="Tola_0061"
/note="Methylenetetrahydrofolate reductase; Region: MTHFR;
pfam02219"
/db_xref="CDD:145399"
misc_feature 82952..83752
/locus_tag="Tola_0061"
/note="Methylenetetrahydrofolate reductase (MTHFR).
5,10-Methylenetetrahydrofolate is reduced to
5-methyltetrahydrofolate by methylenetetrahydrofolate
reductase, a cytoplasmic, NAD(P)-dependent enzyme.
5-methyltetrahydrofolate is utilized by methionine
synthase...; Region: MTHFR; cd00537"
/db_xref="CDD:29637"
misc_feature order(83057..83059,83141..83143,83228..83236,83270..83275,
83327..83329,83333..83335,83345..83347,83351..83353,
83372..83374,83381..83383,83390..83395,83420..83422,
83426..83428,83705..83707)
/locus_tag="Tola_0061"
/note="FAD binding site [chemical binding]; other site"
/db_xref="CDD:29637"
gene complement(83843..84997)
/locus_tag="Tola_0062"
/db_xref="GeneID:7883942"
CDS complement(83843..84997)
/locus_tag="Tola_0062"
/inference="protein motif:PFAM:PF00155"
/note="PFAM: aminotransferase class I and II;
KEGG: pag:PLES_36731 putative aminotransferase"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_002891278.1"
/db_xref="GI:237806838"
/db_xref="InterPro:IPR004839"
/db_xref="GeneID:7883942"
/translation="MFAQRIQHLTSSIIREILASAQKPNVISFAGGLPAEGSFPDIDW
SVLPNKVRQYGMSEGEPELREAIAAEARQKGISCDASQVLILSGSQQGLDLVSKLFID
PDSNVLVESPTYLAALQCFNLFQANCRGVNLSSQGPDIANFEHQIRDYKPRFTYLIPS
FQNPSGTCYTPESRQAVAALLDQYNLPLIEDEPYCELDYDNLAKPPICSFMKTAPWIY
FGSFSKVLIPGLRIGYLIAHPDLITPLVRLKQASDLHTNRPGQWLALEYMNSADKPQR
LERLREFYRVRRDAFAAALESEFADLAEWQIPSGGLFFWLKLKKTVDTRPLLKIALEA
GVAFMPGEAFFAEENPPHGYIRLNFSHTEPELMVEGLRRLRKVLLESDNA"
misc_feature complement(83858..84988)
/locus_tag="Tola_0062"
/note="Aspartate/tyrosine/aromatic aminotransferase [Amino
acid transport and metabolism]; Region: COG0436"
/db_xref="CDD:30785"
misc_feature complement(83870..84919)
/locus_tag="Tola_0062"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature complement(order(84305..84307,84326..84331,84335..84337,
84416..84418,84509..84511,84656..84658,84728..84736))
/locus_tag="Tola_0062"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature complement(order(84209..84211,84218..84220,84305..84313,
84437..84439,84626..84628,84725..84727))
/locus_tag="Tola_0062"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature complement(84326..84328)
/locus_tag="Tola_0062"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene 85130..85627
/locus_tag="Tola_0063"
/db_xref="GeneID:7883943"
CDS 85130..85627
/locus_tag="Tola_0063"
/inference="protein motif:PFAM:PF01047"
/note="PFAM: regulatory protein MarR;
SMART: regulatory protein MarR;
KEGG: bcr:BCAH187_A2582 transcriptional regulator, MarR
family"
/codon_start=1
/transl_table=11
/product="transcriptional regulator, MarR family"
/protein_id="YP_002891279.1"
/db_xref="GI:237806839"
/db_xref="InterPro:IPR000835"
/db_xref="GeneID:7883943"
/translation="MVDQNNQNSLNAALELFHFAFRAFTSGPDAILAEQGLQRVHHRI
LYFVGRNPAISVNALLKILGVSKQALNGPLRALKELDLIDANSDEFDKRIKRLTLSEQ
GQALENRLSQSQRELMTQVFTDAGEDAEQHWRAIMLKLAETKFAHLLNQDNSDKAGEG
WSAEC"
misc_feature 85217..85495
/locus_tag="Tola_0063"
/note="helix_turn_helix multiple antibiotic resistance
protein; Region: HTH_MARR; smart00347"
/db_xref="CDD:197670"
misc_feature 85235..85411
/locus_tag="Tola_0063"
/note="MarR family; Region: MarR_2; pfam12802"
/db_xref="CDD:205082"
gene complement(85677..87146)
/locus_tag="Tola_0064"
/db_xref="GeneID:7883944"
CDS complement(85677..87146)
/locus_tag="Tola_0064"
/inference="protein motif:PFAM:PF00270"
/note="PFAM: DEAD/DEAH box helicase domain protein;
helicase domain protein;
SMART: DEAD-like helicase ; helicase domain protein;
KEGG: slo:Shew_0604 DEAD/DEAH box helicase
domain-containing protein"
/codon_start=1
/transl_table=11
/product="DEAD/DEAH box helicase"
/protein_id="YP_002891280.1"
/db_xref="GI:237806840"
/db_xref="InterPro:IPR000629"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014014"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:7883944"
/translation="MSFTELGLSEPLLRAVKDKGYDTPSPIQLQAIPAVLAGQDVMAA
AQTGTGKTAGFTLPLLHRLSRGNPARSNAVRALVLTPTRELAAQVAESVTTYGKYLPL
KSVVVFGGVNINPQMLAMRKGADVLVATPGRLLDLVSQNALHFRQLEVLILDEADRML
DMGFIRDIRKIINMLPKDRQTLMFSATFSDEIRTLAKGLLNEPVQIDVAPRNTTAETI
KQTICPVDKGRKPALLCHLIKHNNWQQVLVFMRTKHGANKLVTQLETAGIQAAAIHGN
KSQGARTRALSGFKDGSVRVLVATDIAARGIDIAQLPQVVNYELPNIAEDYVHRIGRT
GRAGMEGHAISLVSADEQPLLVDVEKLIKQILPREEFDGFKPQNPVAMTTEAQLTRPV
KKPKKPKMFDDGRSQEPRQQRSPRSSQGEQHKAHSPHTGQPRPHQPKQAEGAAKPASP
TRSGTQRAGQPSRSANAPAGRPQGNRSAAGGQRSSKPQH"
misc_feature complement(85956..87146)
/locus_tag="Tola_0064"
/note="ATP-dependent RNA helicase SrmB; Provisional;
Region: PRK11192"
/db_xref="CDD:183029"
misc_feature complement(86529..87140)
/locus_tag="Tola_0064"
/note="DEAD-box helicases. A diverse family of proteins
involved in ATP-dependent RNA unwinding, needed in a
variety of cellular processes including splicing, ribosome
biogenesis and RNA degradation. The name derives from the
sequence of the Walker B motif; Region: DEADc; cd00268"
/db_xref="CDD:28928"
misc_feature complement(86991..87005)
/locus_tag="Tola_0064"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28928"
misc_feature complement(86676..86687)
/locus_tag="Tola_0064"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:28928"
misc_feature complement(86586..86594)
/locus_tag="Tola_0064"
/note="motif III; other site"
/db_xref="CDD:28928"
misc_feature complement(86109..86495)
/locus_tag="Tola_0064"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature complement(order(86241..86249,86322..86327,86385..86396))
/locus_tag="Tola_0064"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature complement(order(86139..86141,86148..86150,86160..86162,
86223..86225))
/locus_tag="Tola_0064"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
gene complement(87219..88628)
/locus_tag="Tola_0065"
/db_xref="GeneID:7883945"
CDS complement(87219..88628)
/locus_tag="Tola_0065"
/inference="protein motif:PFAM:PF00270"
/note="PFAM: DEAD/DEAH box helicase domain protein;
helicase domain protein; DbpA RNA-binding domain protein;
SMART: DEAD-like helicase ; helicase domain protein;
KEGG: asa:ASA_3744 ATP-dependent RNA helicase DbpA"
/codon_start=1
/transl_table=11
/product="DEAD/DEAH box helicase"
/protein_id="YP_002891281.1"
/db_xref="GI:237806841"
/db_xref="InterPro:IPR000629"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR005580"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014014"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:7883945"
/translation="MSDTNSAATAASSAFAQLALQPALLENLTALGYSEMTPIQAQSL
PAVLQGKDVLAQAKTGSGKTAAFALGLLQGLDVKSLNVQGLVLCPTRELADQVAGEIR
RLARLIPNVKVLTLCGGMPIGPQFSSLEQGAHIVVGTPGRVQKHLDKESLSLAALKTW
VLDEADRMLDMGFADAMREIAKVCPRQRQTLLFSATYPEDIQRLSTEFQRNPLSVRVE
STHSAVQIEQRFFELPNQEAKFPALLKLLQHYQPRSTVIFCNMKHQTQQVADALSAQG
YSALALNGDLEQRERDQVVVRFSNQSCAILVATDVAARGLDIKELQAVVNYDLTPDPE
IHVHRIGRTGRAGQTGLALTLTTASQTNRVLQIEDYQQSQAVWGNLDELKKNPDNMKP
EMVTLCLDGGRKSKVRPGDILGALTKEAGFNGQHIGKINIAELHAYVAVHHSIANKVY
GYLQDGKIKGRKVRVRKLV"
misc_feature complement(87255..88553)
/locus_tag="Tola_0065"
/note="ATP-dependent RNA helicase DbpA; Provisional;
Region: PRK11776"
/db_xref="CDD:183308"
misc_feature complement(87981..88553)
/locus_tag="Tola_0065"
/note="DEAD-box helicases. A diverse family of proteins
involved in ATP-dependent RNA unwinding, needed in a
variety of cellular processes including splicing, ribosome
biogenesis and RNA degradation. The name derives from the
sequence of the Walker B motif; Region: DEADc; cd00268"
/db_xref="CDD:28928"
misc_feature complement(88437..88451)
/locus_tag="Tola_0065"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28928"
misc_feature complement(88131..88142)
/locus_tag="Tola_0065"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:28928"
misc_feature complement(88041..88049)
/locus_tag="Tola_0065"
/note="motif III; other site"
/db_xref="CDD:28928"
misc_feature complement(87603..87938)
/locus_tag="Tola_0065"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature complement(order(87696..87704,87777..87782,87840..87851))
/locus_tag="Tola_0065"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature complement(order(87603..87605,87615..87617,87678..87680))
/locus_tag="Tola_0065"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
misc_feature complement(87255..87446)
/locus_tag="Tola_0065"
/note="DbpA RNA binding domain; Region: DbpA; pfam03880"
/db_xref="CDD:202795"
gene 88973..89734
/locus_tag="Tola_0066"
/db_xref="GeneID:7883946"
CDS 88973..89734
/locus_tag="Tola_0066"
/inference="protein motif:PFAM:PF08220"
/note="PFAM: regulatory protein DeoR;
SMART: regulatory protein DeoR;
KEGG: aha:AHA_1651 glycerol-3-phosphate regulon repressor"
/codon_start=1
/transl_table=11
/product="Cro/CI family transcriptional regulator"
/protein_id="YP_002891282.1"
/db_xref="GI:237806842"
/db_xref="InterPro:IPR001034"
/db_xref="InterPro:IPR014036"
/db_xref="GeneID:7883946"
/translation="MKQSQRHQNILNLLNQHGFVSTEEMVAQFDVSPQTIRRDLNELA
EQKQIIRHHGGASLPDSSTSNTAYSTRKVMQLAEKERIAAQVAARIPDGASLFIDIGT
TTEAIARALLHHKDLRIVTNNLNVAMILTEKDDFKVIIAGGEIRNRDGGIIGEATRDF
IGQFRMDFGIIGISGIDMTGALLDFDYHEVRVAQSIIAHSRQVFLATDHTKFGRNAMV
NLGNISQVDVLFTDQQPPEEIQRIMQQGQVECCIC"
misc_feature 88973..89731
/locus_tag="Tola_0066"
/note="DNA-binding transcriptional repressor GlpR;
Provisional; Region: PRK10906"
/db_xref="CDD:182827"
misc_feature 88988..89155
/locus_tag="Tola_0066"
/note="DeoR-like helix-turn-helix domain; Region:
HTH_DeoR; pfam08220"
/db_xref="CDD:116806"
misc_feature 89189..89671
/locus_tag="Tola_0066"
/note="DeoR C terminal sensor domain; Region: DeoRC;
pfam00455"
/db_xref="CDD:201239"
gene complement(89950..91491)
/gene="glpD"
/locus_tag="Tola_0067"
/db_xref="GeneID:7883947"
CDS complement(89950..91491)
/gene="glpD"
/locus_tag="Tola_0067"
/EC_number="1.1.5.3"
/inference="protein motif:PRIAM:1.1.99.5"
/note="in Escherichia coli this homodimeric enzyme is
expressed under aerobic conditions; anaerobic expression
is repressed by the arcAB system; converts
sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy
acetone phosphate and ubiquinol-8; associates with the
cytoplasmic membrane"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate dehydrogenase"
/protein_id="YP_002891283.1"
/db_xref="GI:237806843"
/db_xref="InterPro:IPR000447"
/db_xref="InterPro:IPR006076"
/db_xref="GeneID:7883947"
/translation="MMNTIPHYDLVVIGGGINGTGIAADAAGRGLSVALFEADDLASA
TSSASSKLIHGGLRYLEHYEFRLVKEALAERETLLRMAPHIAHPMRFRLPHRPHLRPA
WMIRAGLFLYDHLAKRVTLPACSSIKFSPNDGVQPHLVKGFEYSDAWVDDARLVVLNA
MQARNHGARVDTRTACVKARREKEHWQLTLQDQLNGNTFEVTANALVNATGPWVKRLF
DEAMELKSPRNIRLVKGSHIIVPRIHEREEAYILQNEDKRIVFVIPYQQHFSLIGTTD
LEYKGDLRAVKINEEEVQYLCDVVNKHFIHQIAPKDVVWSYSGVRPLCDDESSSPQAV
TRDYTLELADEQGKAPLLSVFGGKLTTYRKLAQAACHKLAPYFPQAREDWTATSKLPG
ADFEGNVLHLTQKYRKQAPWLDAATARRIASCYGSLAAGWLPKELTLNFGSELCREEV
DYLMEQEWACSAEDILWRRTKLGLTLSDAAQAQLKAYVAQRMAVRCGKPVTQIKENIE
ETSAA"
misc_feature complement(90007..91488)
/gene="glpD"
/locus_tag="Tola_0067"
/note="glycerol-3-phosphate dehydrogenase; Reviewed;
Region: glpD; PRK12266"
/db_xref="CDD:183388"
STS 91192..92567
/standard_name="D1S3693"
/db_xref="UniSTS:474271"
gene complement(91663..93156)
/locus_tag="Tola_0068"
/db_xref="GeneID:7883948"
CDS complement(91663..93156)
/locus_tag="Tola_0068"
/inference="protein motif:TFAM:TIGR01311"
/note="TIGRFAM: glycerol kinase;
PFAM: carbohydrate kinase FGGY;
KEGG: asa:ASA_2710 glycerol kinase"
/codon_start=1
/transl_table=11
/product="glycerol kinase"
/protein_id="YP_002891284.1"
/db_xref="GI:237806844"
/db_xref="InterPro:IPR000577"
/db_xref="InterPro:IPR005999"
/db_xref="GeneID:7883948"
/translation="MTKQRYVVALDQGTTSSRAIIFDHDARIVAVSQREFTQHYPQPG
WVEHDPMEIWATQSSTLTEALAKSGIHNDEIAAIGITNQRETTVVWEKATGKPVYNAI
VWQCRRTAAICEELKARGLDNYVRENTGLLLDAYFSGTKVKWILDNVEGAREKAERGE
LLFGTIDTWLIWKMTNGEVHVTDPTNASRTMLYNIRDLQWDGHILQELGIPASMLPQV
RPSSEVYGYTTRGGGAQIPISGIAGDQQAALFGQLCFEKGMAKNTYGTGCFLLMNTGE
TPVKSESGLLTTIAVGPTGNVNYALEGSVFMGGATVQWLRDELRLIDDATDTGYFAGK
VKDSNGVYLVPAFVGLGAPYWDPYARGAIVGLTRGANRNHIIRAALESIAYQSRDVLD
AMQKDSGIRLASLKVDGGAVANDFLMQFQSDIMGTTVVRPKLIETTALGAAFLAGLAV
GFWESTAELSDKFSIDREFEPALPAEQREQLYSGWQKAVTRSQHWVD"
misc_feature complement(91669..93156)
/locus_tag="Tola_0068"
/note="glycerol kinase; Provisional; Region: glpK;
PRK00047"
/db_xref="CDD:178821"
misc_feature complement(91690..93141)
/locus_tag="Tola_0068"
/note="Escherichia coli glycerol kinase-like proteins;
belongs to the FGGY family of carbohydrate kinases;
Region: FGGY_EcGK_like; cd07786"
/db_xref="CDD:198361"
misc_feature complement(order(91798..91803,91807..91824,91828..91833,
91837..91845,91849..91851,92077..92079,92083..92088,
92092..92094,92113..92115,92218..92220,92236..92241,
92245..92247,92251..92253,92260..92262,92266..92268,
92281..92301,92317..92319,92323..92325,92350..92352,
92359..92361,92416..92421,92437..92442,92488..92499,
92563..92565,92569..92574,92590..92595,92602..92607,
92746..92751,92755..92757,92761..92772,92779..92781,
92815..92817,92827..92829,92836..92838,92842..92847,
92905..92931,93025..93027,93073..93075,93079..93081,
93088..93093,93097..93099,93103..93105,93112..93117,
93124..93126,93130..93132,93136..93141))
/locus_tag="Tola_0068"
/note="N- and C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:198361"
misc_feature complement(order(91915..91917,91924..91932,92173..92175,
92179..92184,92218..92223,92227..92232,92350..92352,
92359..92367,92422..92427,92749..92751,92845..92847,
92902..92910,93103..93105,93112..93120,93124..93126))
/locus_tag="Tola_0068"
/note="active site"
/db_xref="CDD:198361"
misc_feature complement(order(91915..91917,91924..91932,92173..92175,
92179..92184,92218..92223,92227..92232,92359..92367,
93103..93105,93112..93120,93124..93126))
/locus_tag="Tola_0068"
/note="MgATP binding site [chemical binding]; other site"
/db_xref="CDD:198361"
misc_feature complement(order(92425..92427,93115..93117,93124..93126))
/locus_tag="Tola_0068"
/note="catalytic site [active]"
/db_xref="CDD:198361"
misc_feature complement(order(92425..92427,93124..93126))
/locus_tag="Tola_0068"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:198361"
misc_feature complement(order(92350..92352,92422..92427,92749..92751,
92845..92847,92902..92910,93115..93117))
/locus_tag="Tola_0068"
/note="glycerol binding site [chemical binding]; other
site"
/db_xref="CDD:198361"
misc_feature complement(order(92467..92472,92629..92631,92638..92640,
92869..92871,92968..92973,92980..92982,92992..92997,
93004..93006,93055..93057))
/locus_tag="Tola_0068"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:198361"
misc_feature complement(order(92032..92034,92041..92043,92053..92079,
92116..92118,92131..92133,92137..92139,92206..92208,
92215..92220,92227..92229,92236..92238,92842..92844,
93019..93021,93028..93030,93037..93039))
/locus_tag="Tola_0068"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:198361"
misc_feature complement(order(92452..92454,92458..92460))
/locus_tag="Tola_0068"
/note="FBP binding site [chemical binding]; other site"
/db_xref="CDD:198361"
misc_feature complement(order(91717..91719,91723..91734,91738..91740,
91744..91746,91948..91950,91954..91956))
/locus_tag="Tola_0068"
/note="protein IIAGlc interface [polypeptide binding];
other site"
/db_xref="CDD:198361"
gene complement(93324..93491)
/locus_tag="Tola_0069"
/db_xref="GeneID:7883949"
CDS complement(93324..93491)
/locus_tag="Tola_0069"
/inference="similar to AA sequence:KEGG:AHA_0716"
/note="KEGG: aha:AHA_0716 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891285.1"
/db_xref="GI:237806845"
/db_xref="GeneID:7883949"
/translation="MARLFLLPFLLALGWTLWLVYFRIPLYQGRKGFYWIIGVSGVLV
AFFSLMLFITH"
gene 93545..94498
/locus_tag="Tola_0070"
/db_xref="GeneID:7883950"
CDS 93545..94498
/locus_tag="Tola_0070"
/inference="protein motif:PFAM:PF00107"
/note="PFAM: Alcohol dehydrogenase zinc-binding domain
protein; Alcohol dehydrogenase GroES domain protein;
KEGG: asa:ASA_0714 quinone oxidoreductase"
/codon_start=1
/transl_table=11
/product="Alcohol dehydrogenase zinc-binding
domain-containing protein"
/protein_id="YP_002891286.1"
/db_xref="GI:237806846"
/db_xref="InterPro:IPR002364"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:7883950"
/translation="MAQLQITRFGGVDVLQLTEKELPAPAADQVLLAVLLASVNPIDA
KTRAGLGWAAQKFKDALPWTPGFDVCGVVREAGSDVTTFSVGQRVCGMTSGGGAYASA
MLAPAAELLPVPKNITHAQAAALPLAGLTARQGLFEFGQLQAGETVLISAAAGGVGHI
AVQLAKQAGATVVATASEANHDFLLKLGADKVVDYHDAEAMAALTGQVDFVFDLVGFD
SGLTALSLLKAGGRQVTVPTIAVPAIKAVAETQGKTVSGMLVHQDADGLAALLALCSA
GKLQVHVSKIYPLAEGAKAHQAIESGRTRGKLLLDPGSQEM"
misc_feature 93545..94480
/locus_tag="Tola_0070"
/note="NADPH:quinone reductase and related Zn-dependent
oxidoreductases [Energy production and conversion /
General function prediction only]; Region: Qor; COG0604"
/db_xref="CDD:30949"
misc_feature 93545..94474
/locus_tag="Tola_0070"
/note="alcohol dehydrogenase and quinone reductase-like
medium chain degydrogenases/reductases; Region:
MDR_like_2; cd05289"
/db_xref="CDD:176191"
misc_feature order(93662..93670,93677..93679,93923..93925,93935..93937,
94001..94018,94073..94078,94082..94084,94124..94126,
94184..94189,94250..94255,94316..94324)
/locus_tag="Tola_0070"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176191"
gene 94499..95107
/locus_tag="Tola_0071"
/db_xref="GeneID:7883951"
CDS 94499..95107
/locus_tag="Tola_0071"
/inference="protein motif:TFAM:TIGR02009"
/note="TIGRFAM: beta-phosphoglucomutase family hydrolase;
HAD-superfamily hydrolase, subfamily IA, variant 3;
PFAM: Haloacid dehalogenase domain protein hydrolase;
KEGG: cja:CJA_3014 hypothetical protein"
/codon_start=1
/transl_table=11
/product="beta-phosphoglucomutase family hydrolase"
/protein_id="YP_002891287.1"
/db_xref="GI:237806847"
/db_xref="InterPro:IPR005833"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006402"
/db_xref="InterPro:IPR010976"
/db_xref="GeneID:7883951"
/translation="MFDVNAYQNYAAWIFDLDGTLSNTLQAHDLAWQHALTQFAIPFT
SERMQQLGGVPIPDTVEILADEAGIRVDVPAVVNVRDRRFYELLPTTLSPTPLVAGVV
LPFLGEKPMAVGTGCHTDMARRILAGLSLDHYLPVVVGADQVTNPKPAPDTFLLAAEK
LGVKPERCLVFEDADAGLKAAAAAGMAAVDVRKLWPVQRPLQ"
misc_feature 94517..95080
/locus_tag="Tola_0071"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:212620"
misc_feature 94538..95014
/locus_tag="Tola_0071"
/note="haloacid dehalogenase-like hydrolase; Region:
Hydrolase; pfam00702"
/db_xref="CDD:201404"
misc_feature order(94544..94552,94841..94846)
/locus_tag="Tola_0071"
/note="active site"
/db_xref="CDD:119389"
misc_feature 94544..94561
/locus_tag="Tola_0071"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature 94841..94843
/locus_tag="Tola_0071"
/note="motif II; other site"
/db_xref="CDD:119389"
gene 95247..97280
/locus_tag="Tola_0072"
/db_xref="GeneID:7883952"
CDS 95247..97280
/locus_tag="Tola_0072"
/inference="protein motif:TFAM:TIGR03361"
/note="TIGRFAM: type VI secretion system Vgr family
protein; Rhs element Vgr protein;
PFAM: Rhs element Vgr protein;
KEGG: pst:PSPTO_5415 rhs element Vgr protein"
/codon_start=1
/transl_table=11
/product="ImpA family type VI secretion-associated
protein"
/protein_id="YP_002891288.1"
/db_xref="GI:237806848"
/db_xref="InterPro:IPR006533"
/db_xref="InterPro:IPR017847"
/db_xref="GeneID:7883952"
/translation="MFFEANEARFLFAVPGHAAAFQVLRFSGEEYISKSFDFRVTLVC
EDNQLDLASFLYQPCVLKIKSPDRIREITGVVYDISQHDTGLRFTEYHITVKPRFDLL
QLRVNYRIYQQLATQQIVEQLLQEAGFTTLDYRWRLHEQHQPREYCVQYAESDYDFIH
RILSEEGIHYHYATQNGQTVLVFGDSNAAFANGVAMDYLPASGLNPDKPALRECQTFW
RTVSGKVSGRDFTFLRPVTPLDSEVTPPPVAQNHQTQISAKNQPSAQANPSDKLEEYR
WPNLSDTEAENLRQNKLALARHMQAAIELQGVTDHGDLVAGKFTTFHELPRREFEPLW
LVRQVHHEGEQPQVLEETSGGQASYHNQFVAVPWQVLFVPGWWSKRPDLPGYQTAIVT
GPKGEEIYTDVYGRIKVQFHWDKEGQGDDKTSCWLRVAQGWAGDRYGSHWIPRVGQEV
VVSFEHGNPDRPLVLGCVYNGANQHPYALPAHKTRTVFKTLSTPGGGGFNELRFEDKK
GREQIFLHAQRDWELMVKANAYATIDGDSHRLTQGNVIERVKHDRSETVKKERFEELN
ADDRLKLKGTQQQQIEQSFMVSVADELHQNAAIKINMEAGAGLTLKVGGSFITLSPAG
VQMVAPAISLNGGGAPLVGSDLSLLDMIKPIGAVVAAARSAKAAASKRCRKQK"
misc_feature 95274..96860
/locus_tag="Tola_0072"
/note="type VI secretion system Vgr family protein;
Region: VI_Rhs_Vgr; TIGR03361"
/db_xref="CDD:200267"
misc_feature 95331..96287
/locus_tag="Tola_0072"
/note="Phage late control gene D protein (GPD); Region:
Phage_GPD; pfam05954"
/db_xref="CDD:203357"
misc_feature 96399..96683
/locus_tag="Tola_0072"
/note="Phage-related baseplate assembly protein; Region:
Phage_base_V; pfam04717"
/db_xref="CDD:203075"
gene 97280..98143
/locus_tag="Tola_0073"
/db_xref="GeneID:7883953"
CDS 97280..98143
/locus_tag="Tola_0073"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: vfm:VFMJ11_A1068 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891289.1"
/db_xref="GI:237806849"
/db_xref="GeneID:7883953"
/translation="MMTLDDWQQKLPATYMVYALIDPLADNKPLEYWYRQADQTDAWP
LYAGTEFKDEVLYGLWLLPLAQLPGWQAWWREQEAAGYATGMLIASEHMPGKLVQHWQ
SLLLAGLDGEEVIFRYYDPRILGPMLYTFTEEETRRFLGPTNELVVWHQNDWLITSPY
PELDLTEHAEPWWRMQDGHFVGQPGEKEITLFNLEQWLWRNANELTTVLYERNGPISE
QLEQTYQRAMSGSIPELWQPAWMILDLMGYLHWWPKIQSLKEIRGADEQRDVMAKVIQ
QIKKAQTGGAE"
misc_feature 97328..97699
/locus_tag="Tola_0073"
/note="Domain of unknown function (DUF4123); Region:
DUF4123; pfam13503"
/db_xref="CDD:205681"
gene 98146..99360
/locus_tag="Tola_0074"
/db_xref="GeneID:7883954"
CDS 98146..99360
/locus_tag="Tola_0074"
/inference="similar to AA sequence:KEGG:ESA_00293"
/note="KEGG: esa:ESA_00293 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891290.1"
/db_xref="GI:237806850"
/db_xref="InterPro:IPR017483"
/db_xref="GeneID:7883954"
/translation="MTAKINQCRDCQPKDQWIEIRLVDEMNQPFGSLSGKLKDSSGVE
HQVTLSGGYLLLTDLPAGPVELKIETSALLNEAKKHKPRPSPQTSPAKEYADKHKGYE
KSKIKYQFITMGDVWQLEPGMVSDRHKAGQTGKLLRMVSNNSYFLEVRALTQLHLPLV
IFQSQKPMDDIKADDMQSGDMSRNQIMNLGMFKPFSKLDYEFDLPASDHFANFRLFAS
SVSWGEYGSLTKMMIDRFEQNVGGKFTHPLLDKAAKSHQNTDAVVDKISDAISAELKK
KSGELEDNDIKKIWNSLATGKNSIHLPGFDTTPDWFNGLGITVHGIWSLQLTLQNLSI
DLVNRTFNGVVSFKAQDHFGLNVDDVSGDKYFEFLRLFRSWFILQRYKGFGYKPFITE
MNHTRKISGDFR"
misc_feature 98608..99348
/locus_tag="Tola_0074"
/note="Protein of unknown function (DUF3289); Region:
DUF3289; cl11840"
/db_xref="CDD:159636"
gene 99357..99872
/locus_tag="Tola_0075"
/db_xref="GeneID:7883955"
CDS 99357..99872
/locus_tag="Tola_0075"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: ses:SARI_02597 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891291.1"
/db_xref="GI:237806851"
/db_xref="GeneID:7883955"
/translation="MIYNLKMKKSHVGWLFFIFVILYFTSDYWLPSKIDTIYKSEFES
DQGSFVITIANPPLTKKDMLSFWSENKKYILDEVNGLDEGESILFVKNEFENKSKEEA
VQFCLLEQKNDEEPCVSYSDRLFIAERENINRVKSYRLTFSDYYGASSCAIYERDDGE
KEYNNDCTDVK"
misc_feature 99375..>99593
/locus_tag="Tola_0075"
/note="Enterobacterial putative membrane protein (DUF943);
Region: DUF943; pfam06092"
/db_xref="CDD:147966"
gene complement(99965..100525)
/locus_tag="Tola_0076"
/db_xref="GeneID:7883956"
CDS complement(99965..100525)
/locus_tag="Tola_0076"
/inference="protein motif:PFAM:PF00132"
/note="PFAM: transferase hexapeptide repeat containing
protein;
KEGG: aha:AHA_0748 carbonic anhydrase"
/codon_start=1
/transl_table=11
/product="transferase hexapeptide repeat containing
protein"
/protein_id="YP_002891292.1"
/db_xref="GI:237806852"
/db_xref="InterPro:IPR001451"
/db_xref="GeneID:7883956"
/translation="MIRKNPSGHLPVIAESAYVDKTAIICGKVIIKDNVFVGPYAVIR
ADEVDANGEMEPIVIGANSNIQDGVVIHSKSGAAVTIGEYSSIAHRSIVHGPCKVGNR
VFIGFNTVLFNCEVGDGAVIRHNSVIDGQDLPAEFYVPSSTRICPQTNLDEIPRVTVA
ATEFSEDVAHTNIDLVKGYKALQNEF"
misc_feature complement(99974..100525)
/locus_tag="Tola_0076"
/note="Carbonic anhydrases/acetyltransferases, isoleucine
patch superfamily [General function prediction only];
Region: PaaY; COG0663"
/db_xref="CDD:31007"
misc_feature complement(99983..100501)
/locus_tag="Tola_0076"
/note="Gamma carbonic anhydrases (CA): Carbonic anhydrases
are zinc-containing enzymes that catalyze the reversible
hydration of carbon dioxide in a two-step mechanism,
involving the nucleophilic attack of a zinc-bound
hydroxide ion on carbon dioxide, followed...; Region:
LbH_gamma_CA; cd00710"
/db_xref="CDD:100039"
misc_feature complement(order(100205..100207,100244..100246,
100250..100261,100310..100312,100322..100327,
100388..100390,100394..100396,100400..100405,
100412..100414,100448..100450,100457..100462,
100466..100468,100472..100474))
/locus_tag="Tola_0076"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:100039"
misc_feature complement(order(100244..100246,100259..100261,
100310..100312))
/locus_tag="Tola_0076"
/note="active site"
/db_xref="CDD:100039"
gene complement(100742..101848)
/locus_tag="Tola_0077"
/db_xref="GeneID:7883957"
CDS complement(100742..101848)
/locus_tag="Tola_0077"
/inference="protein motif:PFAM:PF02492"
/note="PFAM: cobalamin synthesis protein P47K; cobalamin
synthesis CobW domain protein;
KEGG: asa:ASA_0434 hypothetical protein"
/codon_start=1
/transl_table=11
/product="cobalamin synthesis protein P47K"
/protein_id="YP_002891293.1"
/db_xref="GI:237806853"
/db_xref="InterPro:IPR003495"
/db_xref="InterPro:IPR011629"
/db_xref="GeneID:7883957"
/translation="MSESRFDTEDFRIPVTVLTGFLGSGKTTLLNYWVKQPEMANCAV
LINEFGAVGLDHHLVEKLDDNVVMLESGCVCCTVQGDLVNALRDLFMRAMRREIKPFQ
RVLIETTGLADPGPVLFTLRNDPFFAQRYRFDGTVTVVDVCHITRQLNQQYEAVKQVA
LADLLVLTKSDIADFGVLPEVENLLQRINPMAPRHIAIKGELSPAVLEQNGPFGSGSQ
RSTQEIRKWLQGAIAELGLASPMKPATPTVSPLIANAPVASAHSDIDAFCLRYTKPIP
TARFLDGLRMVQMRYPERLLRFKAILWLEEQDTPVVVHGVHDQLYPIMNLPAWPNGEP
ASELVFIMKQTDRQEVEEMLQEEFFPKYPRFQYE"
misc_feature complement(100781..101812)
/locus_tag="Tola_0077"
/note="Putative GTPases (G3E family) [General function
prediction only]; Region: COG0523"
/db_xref="CDD:30869"
misc_feature complement(101333..101809)
/locus_tag="Tola_0077"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(100781..101059)
/locus_tag="Tola_0077"
/note="Cobalamin synthesis protein cobW C-terminal domain;
Region: CobW_C; pfam07683"
/db_xref="CDD:203723"
gene complement(101980..102168)
/locus_tag="Tola_0078"
/db_xref="GeneID:7883958"
CDS complement(101980..102168)
/locus_tag="Tola_0078"
/inference="similar to AA sequence:KEGG:690456"
/note="KEGG: hypothetical protein LOC690456"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891294.1"
/db_xref="GI:237806854"
/db_xref="GeneID:7883958"
/translation="MAGYRAGYGDEDEDVWGEGPDEEEEGVEPDWDDDEDEEWDEETG
DWSEGEDDFDLDPDDEEE"
gene complement(102315..102755)
/locus_tag="Tola_0079"
/db_xref="GeneID:7883959"
CDS complement(102315..102755)
/locus_tag="Tola_0079"
/inference="protein motif:PFAM:PF00582"
/note="PFAM: UspA domain protein;
KEGG: asa:ASA_0046 universal stress protein A"
/codon_start=1
/transl_table=11
/product="UspA domain-containing protein"
/protein_id="YP_002891295.1"
/db_xref="GI:237806855"
/db_xref="InterPro:IPR006016"
/db_xref="GeneID:7883959"
/translation="MNQEHSYNHVLVALDINDDFQPLLERAIAVARRHNAKLSVLHVD
INLRDLYTEMVDIDVERVQRKVLADTKNKLDTILAGIDYPLERSMVMCGDLVEEVNQV
VDAQNIDLLICGHHQSFWNLLASAARQLMNSVRCDLLIIPIPAK"
misc_feature complement(102333..102731)
/locus_tag="Tola_0079"
/note="Usp: Universal stress protein family. The universal
stress protein Usp is a small cytoplasmic bacterial
protein whose expression is enhanced when the cell is
exposed to stress agents. Usp enhances the rate of cell
survival during prolonged exposure to...; Region:
USP_Like; cd00293"
/db_xref="CDD:30165"
misc_feature complement(order(102375..102386,102405..102410,
102414..102419,102627..102629,102711..102719))
/locus_tag="Tola_0079"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30165"
gene complement(102770..104632)
/locus_tag="Tola_0080"
/db_xref="GeneID:7883960"
CDS complement(102770..104632)
/locus_tag="Tola_0080"
/inference="protein motif:TFAM:TIGR00932"
/note="TIGRFAM: potassium efflux system protein;
PFAM: sodium/hydrogen exchanger; TrkA-N domain protein;
KEGG: asa:ASA_3987 glutathione-regulated potassium efflux
system protein KefC"
/codon_start=1
/transl_table=11
/product="potassium efflux system protein"
/protein_id="YP_002891296.1"
/db_xref="GI:237806856"
/db_xref="InterPro:IPR003148"
/db_xref="InterPro:IPR004771"
/db_xref="InterPro:IPR006153"
/db_xref="GeneID:7883960"
/translation="MEQNMLFDAAIFLTAAVVSVPLARRLGLGSVLGYLIAGVIIGPY
LFNFVGASDEVMHVAEFGVVLMLFLIGLELKPALLWQLKGPIIGIGGSQVLFTSTAFT
LIALVFGLRWQQALAVGMILALSSTAIVLQSLTERRMLKSEAGQTSFSVLLFQDIAVI
PMLALLPFLAPGIRFEPEPSALSGWQNGLLIALVISGIVLGGHYLMRPVFRFIAQSGL
REIFVAAALLLVILTALATEAVGLSPALGTFLAGVVLAESEYRHELEANIEPFKGLLL
GLFFISVGAGINFSLLAEHPFLIAGLLLLLLSVKFLILQGVGGLAHMTHGHRWSFAFA
LAQGSEFAFVLFSFAQQLKLFDTQLTALLTLTVALSMAFTPLLLMLNHYLQSKWQAEE
KEERAADQIDEQDNPVIIVGFGRFGQVIGRLLHAHGIGTTVLDNDVSHIDMLRKYGYK
VFYGDADRIDLLQAAGADKAKLLIVAVSNQAKSIALCELAQRHFPQLKILVRAVDRAH
AHQLLQLGVELIYRETVGSAVDLGVSALRQLGIRGNLAWRAGQTFKEHDEKLLREQTA
FLDDEKMYITKSVQYRHILAEMLQATQQDRHSELMHAWEHMDDEDEEDEHEGIH"
misc_feature complement(102821..104632)
/locus_tag="Tola_0080"
/note="glutathione-regulated potassium-efflux system
protein KefC; Provisional; Region: PRK03562"
/db_xref="CDD:179594"
misc_feature complement(103769..104596)
/locus_tag="Tola_0080"
/note="transporter, monovalent cation:proton antiporter-2
(CPA2) family; Region: 2a37; TIGR00932"
/db_xref="CDD:162117"
misc_feature complement(103073..103411)
/locus_tag="Tola_0080"
/note="TrkA-N domain; Region: TrkA_N; pfam02254"
/db_xref="CDD:202177"
gene complement(104632..105228)
/locus_tag="Tola_0081"
/db_xref="GeneID:7883961"
CDS complement(104632..105228)
/locus_tag="Tola_0081"
/inference="protein motif:PFAM:PF02525"
/note="PFAM: NAD(P)H dehydrogenase (quinone);
KEGG: asa:ASA_3986 glutathione-regulated potassium-efflux
system ancillary protein KefG"
/codon_start=1
/transl_table=11
/product="NAD(P)H dehydrogenase (quinone)"
/protein_id="YP_002891297.1"
/db_xref="GI:237806857"
/db_xref="InterPro:IPR003680"
/db_xref="GeneID:7883961"
/translation="MKRILIIFAHPGYHRSHANRAMLRGLKGLEDVKVHDLYQHYPNM
FIDVAREQRMLRDYDIIVFQHPIYWYSCPAILKEWMEQVLEYGYAFGPEGNALKHKYL
LAAVTTGGSAASYSTTGHNHHPITDYLLPIQQSGLMCGMRWLPPFVVYGYHSVNDPDY
LKMKGQQYRRLLTALRDEEFTPQQLHNATYLTDLLKEL"
misc_feature complement(104713..105222)
/locus_tag="Tola_0081"
/note="NADPH-dependent FMN reductase; Region: FMN_red;
cl00438"
/db_xref="CDD:212217"
gene 105462..107528
/locus_tag="Tola_0082"
/db_xref="GeneID:7883962"
CDS 105462..107528
/locus_tag="Tola_0082"
/EC_number="3.4.21.83"
/inference="protein motif:PRIAM:3.4.21.83"
/note="PFAM: peptidase S9A prolyl oligopeptidase domain
protein beta-propeller; peptidase S9 prolyl oligopeptidase
active site domain protein;
KEGG: asa:ASA_3983 protease II"
/codon_start=1
/transl_table=11
/product="oligopeptidase B"
/protein_id="YP_002891298.1"
/db_xref="GI:237806858"
/db_xref="InterPro:IPR001375"
/db_xref="InterPro:IPR002470"
/db_xref="InterPro:IPR002471"
/db_xref="InterPro:IPR004106"
/db_xref="GeneID:7883962"
/translation="MNSILPPIATQHPHSLIFHGDERIDPYYWLRDDTRSNPEVLDYL
HAENGYAEAMLRPTEALQKTLYQEMVDRQLPDDSSVPYYLKGYWYRSRYLPEQEYPLY
ERLAARPDAPTELLLDGNQRAAGVDFYDLGALEVSPSNHWMACGEDFVSRRQYQISVR
NLQTGEWLPDLLENTSGDVVWSADSAGFFYVRLDSETLLPYQVWYHTLGADPAQDKLV
YEEADNTYYLHISHSRSEEYLLISLSSTLSSEVHLLSLKTPHGTPTLFLARRRGHEYG
LDHFQQHFYVRSNREGRNFALYLADDGAEQHWQCLLPVREHTLLQDFVLFRNALFVEE
RDAGLTRLRELDLQGKEVRTIAVDDPAYVLWLGTNPDPDNPEFRYGYASLTTPTTHYA
LDIASGERKMLKRQPVLGDFKPDYYQSQRLWIEARDGTQVPVSLVYRKDLYQPGQNPL
LVYGYGAYGMSEDPYFASSRLSLLDRGFIFAIAHVRGGEELGRHWYEQGRQLKKMNSF
TDFIDATEGILAAGYGDPKRVFATGGSAGGLLMGAVANMAPERYLGVVAVVPFVDTLT
SMLDESIPLTTGEYDEWGDPRDPAVYQYIKSYSPYDQIKPQAYPHLLVVSGLHDSQVQ
YWEPAKWVAKLRANKTDDHLLLLSMDMDAGHGGKSGRYRYFLDIAQEYAFMLALADTS
INSASI"
misc_feature 105462..107504
/locus_tag="Tola_0082"
/note="Protease II [Amino acid transport and metabolism];
Region: PtrB; COG1770"
/db_xref="CDD:31956"
misc_feature 106851..107489
/locus_tag="Tola_0082"
/note="Prolyl oligopeptidase family; Region: Peptidase_S9;
pfam00326"
/db_xref="CDD:201156"
gene 107633..107932
/locus_tag="Tola_0083"
/db_xref="GeneID:7883963"
CDS 107633..107932
/locus_tag="Tola_0083"
/inference="protein motif:PFAM:PF04175"
/note="PFAM: conserved hypothetical protein;
KEGG: asa:ASA_3969 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891299.1"
/db_xref="GI:237806859"
/db_xref="InterPro:IPR005272"
/db_xref="GeneID:7883963"
/translation="MTTVDHMEEVCEACGCVAEVGTIIRDGDDLVMIPVEGDNEEDAR
ARQERYIAVAKEACPDVLVSSELQTVEDGVVLNTTLQFTCTAEKMIFEMRARFVR"
misc_feature 107696..107920
/locus_tag="Tola_0083"
/note="Protein of unknown function (DUF406); Region:
DUF406; pfam04175"
/db_xref="CDD:190895"
gene complement(108762..109361)
/locus_tag="Tola_0084"
/db_xref="GeneID:7883964"
CDS complement(108762..109361)
/locus_tag="Tola_0084"
/inference="protein motif:TFAM:TIGR01755"
/note="TIGRFAM: flavoprotein WrbA;
PFAM: flavodoxin/nitric oxide synthase; NADPH-dependent
FMN reductase;
KEGG: ypm:YP_1536 TrpR binding protein WrbA"
/codon_start=1
/transl_table=11
/product="flavoprotein WrbA"
/protein_id="YP_002891300.1"
/db_xref="GI:237806860"
/db_xref="InterPro:IPR005025"
/db_xref="InterPro:IPR008254"
/db_xref="InterPro:IPR010089"
/db_xref="GeneID:7883964"
/translation="MTKVLVLYHSMYGHIETMANSIAEGAREVSGVEVTIKRVPETMD
PARFAAAGGKTEQSAPVATPAELVDYDAIIFGVPTRFGNMTAQMRNFLDQTGGLWAKG
ALFGKIASVFASTGVGGGQEMTITSTWTTLAHHGMVIVPIGYGTAEMFDISHVGGGTP
YGATTLAGGDGSRQPDARELAIARFQGKHVATVAAKMKG"
misc_feature complement(108765..109361)
/locus_tag="Tola_0084"
/note="NAD(P)H:quinone oxidoreductase; Provisional;
Region: PRK03767"
/db_xref="CDD:179647"
misc_feature complement(108987..>109355)
/locus_tag="Tola_0084"
/note="Uncharacterized flavoproteins [Energy production
and conversion]; Region: FpaA; COG0426"
/db_xref="CDD:30775"
gene complement(109528..109899)
/locus_tag="Tola_0085"
/db_xref="GeneID:7883965"
CDS complement(109528..109899)
/locus_tag="Tola_0085"
/inference="protein motif:TFAM:TIGR02978"
/note="TIGRFAM: phage shock protein C;
PFAM: PspC domain protein;
KEGG: hch:HCH_05445 phage shock protein PspC"
/codon_start=1
/transl_table=11
/product="phage shock protein C, PspC"
/protein_id="YP_002891301.1"
/db_xref="GI:237806861"
/db_xref="InterPro:IPR007168"
/db_xref="InterPro:IPR014320"
/db_xref="GeneID:7883965"
/translation="MNSSGRKLYRSSNQAWLGGVCAGVAECYGQPVWLVRILMITLFV
FSGSLGILVYLAGVFLLEKQPTQLPPQPGIRPQFGYGEDTAQRARQLGERMKKLDQRL
QAMERYVTSSRYRFDKEFNKL"
misc_feature complement(109531..109887)
/locus_tag="Tola_0085"
/note="phage shock protein C; Region: phageshock_pspC;
TIGR02978"
/db_xref="CDD:132023"
misc_feature complement(109702..109884)
/locus_tag="Tola_0085"
/note="PspC domain; Region: PspC; pfam04024"
/db_xref="CDD:202857"
gene complement(109913..110170)
/gene="pspB"
/locus_tag="Tola_0086"
/db_xref="GeneID:7883966"
CDS complement(109913..110170)
/gene="pspB"
/locus_tag="Tola_0086"
/inference="protein motif:TFAM:TIGR02976"
/note="acts together with PspC to induce psp operon during
infection with phage, exposure to ethanol or osmotic
shock; forms a complex with PspA and C; PspC is required
for PspAB binding"
/codon_start=1
/transl_table=11
/product="phage shock protein B"
/protein_id="YP_002891302.1"
/db_xref="GI:237806862"
/db_xref="InterPro:IPR009554"
/db_xref="GeneID:7883966"
/translation="MSLMMFFFVPAVVFLALVAPVWLILHYWTQSRLNRGLSAEERLQ
MEDALALANRLEQRISALETILDVQQPDWRRHDDNRNHRSS"
misc_feature complement(109952..>110107)
/gene="pspB"
/locus_tag="Tola_0086"
/note="phage shock protein B; Provisional; Region: pspB;
PRK09458"
/db_xref="CDD:181874"
gene complement(110170..110844)
/locus_tag="Tola_0087"
/db_xref="GeneID:7883967"
CDS complement(110170..110844)
/locus_tag="Tola_0087"
/inference="protein motif:TFAM:TIGR02977"
/note="TIGRFAM: phage shock protein A;
PFAM: PspA/IM30 family protein;
KEGG: hch:HCH_05443 phage shock protein A (IM30),
suppresses sigma54-dependent transcription"
/codon_start=1
/transl_table=11
/product="phage shock protein A, PspA"
/protein_id="YP_002891303.1"
/db_xref="GI:237806863"
/db_xref="InterPro:IPR007157"
/db_xref="InterPro:IPR014319"
/db_xref="GeneID:7883967"
/translation="MGIFSRFSDIINSNLTALLDRAEDPAKMVRMMIQEMEETLVEVR
TSSARVLADRKEQERRLQRLQSDVLDWEHKARLALSKGRDDLARAALAEKQAVEETLQ
LAGRELKVIEDQLCVLNEEISQLQQKLDDAKAKQQSLLAREQTSRSRMDIRRSSNREK
LEEAFRKFEAYERKMDNMEAEVEAQDLGRTRTLHDEFTELTRNDKVESELEALKASMT
NQRSEH"
misc_feature complement(110194..110844)
/locus_tag="Tola_0087"
/note="phage shock protein A; Region: phageshock_pspA;
TIGR02977"
/db_xref="CDD:200224"
gene 111021..112055
/locus_tag="Tola_0088"
/db_xref="GeneID:7883968"
CDS 111021..112055
/locus_tag="Tola_0088"
/inference="protein motif:TFAM:TIGR02974"
/note="KEGG: hch:HCH_05441 psp operon transcription
activator PspF (sigma 54-dependent);
TIGRFAM: psp operon transcriptional activator;
PFAM: sigma-54 factor interaction domain-containing
protein; helix-turn-helix Fis-type; ATPase associated with
various cellular activities AAA_5;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="Fis family sigma-54 specific transcriptional
activator PspF"
/protein_id="YP_002891304.1"
/db_xref="GI:237806864"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR002197"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011704"
/db_xref="InterPro:IPR014317"
/db_xref="GeneID:7883968"
/translation="MTTPKQHVIGSSEIWHQVLQQASQLAPLNRPVLLIGERGTGKEL
IAERLHYLSKRWQQPYLQVNCAAMQENLLESELFGHEVGSFTGATRSREGLFERADGG
TLFLDELATASLQVQEKLLRVIEYGRFERLGGSKTLRVDVRVVAACNEDLPALVGQGR
FRGDLLDRLAFDVLNLPPLRYRKEDIAELAEHFALRMCLELGYDYFSGFTVHALQQLM
EHDWPGNVRELKNVVERSIYRHADPAKPVADIVLDPFASPWRTSSAMISPSVIPVSAE
PHISPVLQTCDLKTELARLEQRLILQALQQQHFHQRRTAQALGVSYDQLRAALRKYPH
LLTKRSSNEG"
misc_feature 111042..112016
/locus_tag="Tola_0088"
/note="psp operon transcriptional activator PspF; Region:
phageshock_pspF; TIGR02974"
/db_xref="CDD:163093"
misc_feature 111066..111554
/locus_tag="Tola_0088"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 111126..111149
/locus_tag="Tola_0088"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(111129..111152,111339..111341,111465..111467)
/locus_tag="Tola_0088"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 111327..111344
/locus_tag="Tola_0088"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 111522..111524
/locus_tag="Tola_0088"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 111894..112016
/locus_tag="Tola_0088"
/note="Bacterial regulatory protein, Fis family; Region:
HTH_8; pfam02954"
/db_xref="CDD:202485"
gene 112630..112872
/locus_tag="Tola_0089"
/db_xref="GeneID:7883969"
CDS 112630..112872
/locus_tag="Tola_0089"
/inference="similar to AA sequence:KEGG:AHA_0359"
/note="KEGG: aha:AHA_0359 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891305.1"
/db_xref="GI:237806865"
/db_xref="GeneID:7883969"
/translation="MSQSVHGHDVMHMMLELGGQFTRDSLKSAIETRFGADTRFHTCS
AEDMTAEQLIDFLQAKGKFVASDAGFNTREEHICQH"
misc_feature 112639..112869
/locus_tag="Tola_0089"
/note="probable metal-binding protein; Region:
matur_matur; TIGR03853"
/db_xref="CDD:163565"
gene complement(112938..113480)
/locus_tag="Tola_0090"
/db_xref="GeneID:7883970"
CDS complement(112938..113480)
/locus_tag="Tola_0090"
/inference="similar to AA sequence:KEGG:PP_0737"
/note="KEGG: ppu:PP_0737 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891306.1"
/db_xref="GI:237806866"
/db_xref="GeneID:7883970"
/translation="MSITSVTPIRSVTILLSSMAMFISAASSAADLSLALGHSGDSTM
TYRTGIQFPWQQSWFETEAGRLSGYWTVGYTYWDSQDKVNTHSLSASPVLTWEFGARG
ADVQPFIEAGIGLAAFSRNKIEDRELGSSVNFEDRFGFGIRFYQRHTIGAQALHYSNA
GISSDNAGIESYNIYYRFDF"
misc_feature complement(112941..113366)
/locus_tag="Tola_0090"
/note="Lipid A 3-O-deacylase (PagL); Region: PagL;
pfam09411"
/db_xref="CDD:204235"
gene 113665..114252
/locus_tag="Tola_0091"
/db_xref="GeneID:7883971"
CDS 113665..114252
/locus_tag="Tola_0091"
/inference="protein motif:PFAM:PF01914"
/note="PFAM: multiple antibiotic resistance (MarC)-related
protein; Integral membrane protein TerC;
KEGG: asa:ASA_3972 multiple antibiotic resistance protein
MarC"
/codon_start=1
/transl_table=11
/product="multiple antibiotic resistance (MarC)-like
protein"
/protein_id="YP_002891307.1"
/db_xref="GI:237806867"
/db_xref="InterPro:IPR002771"
/db_xref="InterPro:IPR005496"
/db_xref="GeneID:7883971"
/translation="MSVITAAVMLFLIMDPVGNLPVFLSILRHLPAERRRKVMIRELL
ISLAVMLLFLFTGQELLNLLNLKQEAVSIAGGIVLFLIALRMIFPGQGGVTGLPEGEE
PLIVPMAIPMIAGPSILAALVLLSHQYPDQMTDWVLALLLSWGASAVILMFYEQVHKL
LGERVLTAMERLMGMLLVMISVQMLLDGAVQYLHR"
misc_feature 113671..114246
/locus_tag="Tola_0091"
/note="MarC family integral membrane protein; Region:
MarC; cl00919"
/db_xref="CDD:186259"
gene complement(114313..116946)
/locus_tag="Tola_0092"
/db_xref="GeneID:7883972"
CDS complement(114313..116946)
/locus_tag="Tola_0092"
/EC_number="4.1.1.31"
/inference="protein motif:PRIAM:4.1.1.31"
/note="catalyzes the formation of oxaloacetate from
phosphoenolpyruvate"
/codon_start=1
/transl_table=11
/product="phosphoenolpyruvate carboxylase"
/protein_id="YP_002891308.1"
/db_xref="GI:237806868"
/db_xref="InterPro:IPR001449"
/db_xref="GeneID:7883972"
/translation="MNDMYAALRGNVGMLGHLLGKTIKEHLGDEFLDKIENIRQLAKS
SRQGNEEDRQKLITTLKNLSDDELLPVARAFSQFLNLANVAEQFHSMSRQGELHTTLD
PLDSLFDKLKNANLSEQEIIDTVCELDIELVLTAHPTEVTRRTLIHKHVQLNECLEEL
ELQDLTPRECKFIQHRIEQLVNQSWHTNEIREQRPTPVDEAKWGFAVIENNLWPAIPL
FLRQLDDRLQENFGIRLPLRAHPVRIASWMGGDRDGNPFVTAKVTQEVLLLSRWVAIN
LFLTDIQELVSELSMTDCNEELRQRVGECSEPYRAILRVVRDSLRETQQAVTAKLQGQ
YTENRDLITRTEQLREPLELCYRSLQSCGMSIIADGMLLDVLRKLACFGVNLLKLDIR
QDGERHGQVLSELTQYLELGDYAEWRETEKQEFLLKELASRRPLLPANWQPSAESQEV
VDTCRVIAQTDPDAFGIYIISMARQPSDVLAVQLLLKEVGCKFHMPIAPLFETQNDLQ
NAAAVLNRLLSVEWYRNYIRGQQYVMIGYSDSAKDAGMMSAGWAQYRAMEDLVAIAER
EDLKLTLFHGRGGTIGRGGGPAHQAILSQPPGSLKGGFRVTEQGEMIRFKFGLPEVAI
HNFKLYTSAVLEANLLPPPKPEAAWYDVMDKLSEISCQHYRSIVRDEPDFVPYFRAAT
PEMELGKLPLGSRPSKRKPNGGVESLRAIPWIFAWTQNRLMLPSWLGAHVALQAVMDE
GKEDLLKEMDQQWPFFHTRLEMLEMVFLKADLWLAEYYDLRLAPENLWPLGKRLRQEL
QDSINVVLQLLPKRGELLDDQPWIKESIKLRNPYTDPLNVLQVELLHRSRATPDEVNP
QVDQALMVTIAGIAAGMRNTG"
misc_feature complement(114316..116946)
/locus_tag="Tola_0092"
/note="phosphoenolpyruvate carboxylase; Reviewed; Region:
PRK00009"
/db_xref="CDD:178790"
misc_feature complement(114316..116943)
/locus_tag="Tola_0092"
/note="Phosphoenolpyruvate carboxylase [Energy production
and conversion]; Region: Ppc; COG2352"
/db_xref="CDD:32499"
gene complement(117076..118221)
/locus_tag="Tola_0093"
/db_xref="GeneID:7886081"
CDS complement(117076..118221)
/locus_tag="Tola_0093"
/inference="protein motif:TFAM:TIGR01892"
/note="catalyzes the formation of L-ornithine from
N(2)-acetyl-L-ornithine in arginine biosynthesis"
/codon_start=1
/transl_table=11
/product="acetylornithine deacetylase"
/protein_id="YP_002891309.1"
/db_xref="GI:237806869"
/db_xref="InterPro:IPR001261"
/db_xref="InterPro:IPR002933"
/db_xref="InterPro:IPR010169"
/db_xref="InterPro:IPR011650"
/db_xref="GeneID:7886081"
/translation="MSNLDFFQMYRDIIALPSISSTDPAWDQSNQSVIELLASWFEKL
GMQIDITPVPGTAGKFNLIATIGSGDGGLLLAGHTDTVPFDAGRWQKDPFQLTQDGDR
IYGLGTIDMKGFFVFIVEALKDIDLTQLKKPLRILATADEETSMAGAKAIADTHPIRP
DYAVIGEPTGLVPVFMHKGHMSEAIRVTGKSGHSSNPANGVNAIEIMHKVLTQVLIMQ
QELKQKYHNAHFDVPYPTLNLGSIHGGDSANRICGGCELCIDLRPIPGVMPEDLIAEL
KRHLAPVEAEFPGAISLTHLHEPVPPYGCDENSLLVKEAEQLSGNQAEVVNYCTEAPF
IQQLGCETIVMGPGHIAQAHQPDEYLDLSFVKPTTELLRHLVQRFCL"
misc_feature complement(117079..118221)
/locus_tag="Tola_0093"
/note="acetylornithine deacetylase; Provisional; Region:
PRK05111"
/db_xref="CDD:179939"
misc_feature complement(117094..118200)
/locus_tag="Tola_0093"
/note="M20 Peptidase acetylornithine deacetylase; Region:
M20_ArgE; cd03894"
/db_xref="CDD:193514"
misc_feature complement(order(117721..117723,117793..117798,
117892..117894,117988..117990))
/locus_tag="Tola_0093"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193514"
misc_feature complement(order(117241..117243,117436..117438,
117442..117444,117466..117471,117487..117510,
117514..117516,117577..117579,117586..117591,
117595..117600,117607..117612,117616..117618,
117634..117645,117676..117678))
/locus_tag="Tola_0093"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:193514"
gene 118465..119472
/gene="argC"
/locus_tag="Tola_0094"
/db_xref="GeneID:7886082"
CDS 118465..119472
/gene="argC"
/locus_tag="Tola_0094"
/EC_number="1.2.1.38"
/inference="protein motif:TFAM:TIGR01850"
/note="catalyzes the reduction of N-acetyl-5-glutamyl
phosphate to N-acetyl-L-glutamate 5-semialdehyde in
arginine biosynthesis and the reduction of
N-acetyl-gamma-aminoadipyl-phosphate to
N-acetyl-L-aminoadipate-semialdehyde in lysine
biosynthesis; involved in both the arginine and lysine
biosynthetic pathways; lysine is produced via the AAA
pathway, lysine from alpha-aminoadipate"
/codon_start=1
/transl_table=11
/product="N-acetyl-gamma-glutamyl-phosphate reductase"
/protein_id="YP_002891310.1"
/db_xref="GI:237806870"
/db_xref="InterPro:IPR000534"
/db_xref="InterPro:IPR000706"
/db_xref="InterPro:IPR012280"
/db_xref="GeneID:7886082"
/translation="MLNVVIIGASGYAGAELALLVHKHPELNLKGLYVSAGSQDANKP
FSALHPQCLGLVDLPVKPLDEAGMLEAKTGTDLVCLATAHEVSMNLAPQFLDAGIPVF
DLSGAFRVQQDGFYDKYYGFTHDQPEWLAKAVYGLAEWNAEQIKKTDLVAVAGCYPTA
SLLALKPLMEAGLIKADTTPIINAVSGVSGAGRKAAIGTSFCEVSLNPYGVFNHRHQP
EISYHLGGKVVFQPHLGNFVRGILATIYVQLADGVTAEQIDAAYQQAYSHSPIVRLSK
QWPSIRSVAGTPFCDLHWQMQDGLLIVGSAIDNLLKGASSQALQCINLRFGFAPTTGL
M"
misc_feature 118465..119469
/gene="argC"
/locus_tag="Tola_0094"
/note="N-acetyl-gamma-glutamyl-phosphate reductase;
Validated; Region: argC; PRK00436"
/db_xref="CDD:179024"
misc_feature 118471..118905
/gene="argC"
/locus_tag="Tola_0094"
/note="Semialdehyde dehydrogenase, NAD binding domain;
Region: Semialdhyde_dh; smart00859"
/db_xref="CDD:197927"
misc_feature 118957..119400
/gene="argC"
/locus_tag="Tola_0094"
/note="Glyceraldehyde 3-phosphate dehydrogenase,
C-terminal domain; Region: Gp_dh_C; cl15856"
/db_xref="CDD:210256"
gene 119490..120272
/locus_tag="Tola_0095"
/db_xref="GeneID:7886083"
CDS 119490..120272
/locus_tag="Tola_0095"
/EC_number="2.7.2.8"
/inference="protein motif:TFAM:TIGR00761"
/note="catalyzes the phosphorylation of
N-acetyl-L-glutamate to form N-acetyl-L-glutamate
5-phosphate"
/codon_start=1
/transl_table=11
/product="acetylglutamate kinase"
/protein_id="YP_002891311.1"
/db_xref="GI:237806871"
/db_xref="InterPro:IPR001048"
/db_xref="InterPro:IPR004662"
/db_xref="GeneID:7886083"
/translation="MTQQVPLIIKLGGALLETEGALTAFIGGIQHFLKQYPRPLVLVH
GGGCLVDDLLKALGKTSTKKNGLRVTPFDQIPYVVGALAGTANKQMMAEAIAQGLNPV
GLSLADGGLCEVTQLDPELGAVGDCKPKNPALLKALLAQDFLPVISSIGITAQGQLMN
VNADQAAIALAELLDADLLMLSDVVGILDANKQLIPELDPAKTEQLIADGVITDGMAV
KVKAALQVSAAIQKPIVVASWRDPELLVKLANGEAAGTRLQA"
misc_feature 119508..120263
/locus_tag="Tola_0095"
/note="Amino Acid Kinases (AAK) superfamily, catalytic
domain; present in such enzymes like N-acetylglutamate
kinase (NAGK), carbamate kinase (CK), aspartokinase (AK),
glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK
superfamily includes kinases that...; Region: AAK;
cl00452"
/db_xref="CDD:212219"
misc_feature order(119517..119519,119523..119531,120036..120041,
120048..120053)
/locus_tag="Tola_0095"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:58599"
misc_feature order(119517..119519,119523..119528,119622..119630,
119973..119981)
/locus_tag="Tola_0095"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:58599"
gene 120299..121210
/locus_tag="Tola_0096"
/db_xref="GeneID:7886084"
CDS 120299..121210
/locus_tag="Tola_0096"
/inference="protein motif:TFAM:TIGR00658"
/note="catalyzes the formation of L-citrulline from
carbamoyl phosphate and L-ornithine in arginine
biosynthesis and degradation"
/codon_start=1
/transl_table=11
/product="ornithine carbamoyltransferase"
/protein_id="YP_002891312.1"
/db_xref="GI:237806872"
/db_xref="InterPro:IPR002082"
/db_xref="InterPro:IPR002292"
/db_xref="InterPro:IPR006130"
/db_xref="InterPro:IPR006131"
/db_xref="InterPro:IPR006132"
/db_xref="GeneID:7886084"
/translation="MRHLLDTTEFNKSELEALIALGREMKANPAAFRTGLAGKNIVTL
FEKQSLRTRVTFDIGINRLGGHAVYLDQQNGVMGQRESVKDFAMNLSRWCDGIVARVF
DHKTLLGLREHATVPVVNSLCNLYHPCQALADFMTIAENYDDLSKVKLAYLGDGNNVA
HSLLITGAILGTDVTVVSPKGSGPDAQIFNLAAELARQSGAKLAVTDNCADIRGFDVA
YTDTWVSMGDNTPMDAVKDKFMPYQINQALLDNTGIRHVLHCQPAHRELEITSEVMDG
PASLIMDEAENRMHIQNAILHTLINQA"
misc_feature 120299..121204
/locus_tag="Tola_0096"
/note="ornithine carbamoyltransferase; Provisional;
Region: PRK14805"
/db_xref="CDD:184827"
misc_feature 120302..120718
/locus_tag="Tola_0096"
/note="Aspartate/ornithine carbamoyltransferase,
carbamoyl-P binding domain; Region: OTCace_N; pfam02729"
/db_xref="CDD:202362"
misc_feature 120740..121195
/locus_tag="Tola_0096"
/note="Aspartate/ornithine carbamoyltransferase, Asp/Orn
binding domain; Region: OTCace; pfam00185"
/db_xref="CDD:201065"
gene 121300..122685
/locus_tag="Tola_0097"
/db_xref="GeneID:7886085"
CDS 121300..122685
/locus_tag="Tola_0097"
/inference="protein motif:TFAM:TIGR00838"
/note="catalyzes the formation of arginine from
(N-L-arginino)succinate"
/codon_start=1
/transl_table=11
/product="argininosuccinate lyase"
/protein_id="YP_002891313.1"
/db_xref="GI:237806873"
/db_xref="InterPro:IPR000362"
/db_xref="InterPro:IPR003031"
/db_xref="InterPro:IPR009049"
/db_xref="GeneID:7886085"
/translation="MALWGGRFSQAADTRFKQFNDSLRFDYRLAEQDIVGSIGWSKAL
VSVGILTAEEQAKLEVALLALKAEVEADPEQILRSDAEDIHSWVEGKLIERVGDLGKK
LHTGRSRNDQVATDLKLWCKQQGNLLLDSIHGLQTKLVATARQYQTTVLPGYTHLQRA
QPVTFSHWALAYVEMLDRDYSRLQDALKRLNTSPLGSGALAGTAYAIDRQVLALDLGF
DRATRNSLDSVSDRDHVIELMSSAALSMIHLSRFAEDLIFYASGEAGFIELSDKVTSG
SSLMPQKKNPDALELIRGKTGRVAGALNGMLMTLKALPLAYNKDMQEDKEGLFDALDT
WHDCLDMAQLVLEDLKVNEPVTKAAAMGGYSNATELADYLVAKGIPFREAHHIVGEAV
VYAITQQKPLEDLSVAEFKQFNAVIADDVYPILSLESTLAKRQALGGVCAEQIAFALQ
QAEQHLSTRHK"
misc_feature 121300..122664
/locus_tag="Tola_0097"
/note="argininosuccinate lyase; Provisional; Region:
PRK04833"
/db_xref="CDD:179883"
misc_feature 121363..122667
/locus_tag="Tola_0097"
/note="Argininosuccinate lyase (argininosuccinase, ASAL);
Region: Argininosuccinate_lyase; cd01359"
/db_xref="CDD:176463"
misc_feature order(121363..121365,121375..121377,121546..121548,
121552..121554,121621..121629,121636..121638,
121762..121767,121993..121995,122122..122124,
122128..122130,122152..122154,122158..122160,
122167..122169,122248..122250,122254..122256,
122263..122265,122269..122274)
/locus_tag="Tola_0097"
/note="active sites [active]"
/db_xref="CDD:176463"
misc_feature order(121591..121593,121600..121602,121609..121614,
121759..121782,121798..121800,121810..121815,
121831..121833,121840..121845,121852..121854,
121864..121866,121897..121911,121915..121917,
121924..121926,121966..121980,121987..121992,
121996..121998,122008..122010,122017..122019,
122029..122031,122038..122043,122047..122052,
122059..122064,122077..122082,122089..122091,
122113..122115,122131..122142,122146..122154,
122158..122160,122167..122172,122176..122193,
122197..122205,122212..122214,122218..122226,
122248..122259,122266..122268,122275..122277,
122308..122310,122317..122319,122398..122400,
122413..122415,122425..122427,122440..122445,
122452..122454,122461..122463,122599..122601,
122605..122619,122641..122643)
/locus_tag="Tola_0097"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176463"
gene 122972..123283
/locus_tag="Tola_0098"
/db_xref="GeneID:7886086"
CDS 122972..123283
/locus_tag="Tola_0098"
/inference="protein motif:TFAM:TIGR01049"
/note="TIGRFAM: ribosomal protein S10;
PFAM: ribosomal protein S10;
KEGG: aha:AHA_0308 ribosomal protein S10"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S10"
/protein_id="YP_002891314.1"
/db_xref="GI:237806874"
/db_xref="InterPro:IPR001848"
/db_xref="InterPro:IPR005731"
/db_xref="GeneID:7886086"
/translation="MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPT
RKERFTVLISPHVNKDARDQYEIRTHKRLVDIVEPTDKTVDALMRLDLAAGVDVQISL
G"
misc_feature 122972..123277
/locus_tag="Tola_0098"
/note="30S ribosomal protein S10; Reviewed; Region: rpsJ;
PRK00596"
/db_xref="CDD:179076"
gene 123306..123944
/locus_tag="Tola_0099"
/db_xref="GeneID:7886087"
CDS 123306..123944
/locus_tag="Tola_0099"
/inference="protein motif:PFAM:PF00297"
/note="PFAM: ribosomal protein L3;
KEGG: aha:AHA_0309 ribosomal protein L3"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L3"
/protein_id="YP_002891315.1"
/db_xref="GI:237806875"
/db_xref="InterPro:IPR000597"
/db_xref="GeneID:7886087"
/translation="MTLGLVGRKLGMTRVFTEDGVSIPVTVIEVEANRVTQLKTLETD
GYTAVQVTTGVKKASRLTKAEAGHFAKAEVEAGRGLWEFRLNDGEGADLTVGSELKVD
IFADVKKADVTGISKGKGFAGVVKRWNFRTQDMTHGNSRSHRVPGSIGQNQSPGKVFK
GKKMAGHLGCERVTVQSLDIVRVDVERNLLLIKGAVPGATNGDVIVKPAVKA"
misc_feature 123306..123941
/locus_tag="Tola_0099"
/note="50S ribosomal protein L3; Validated; Region: rplC;
PRK00001"
/db_xref="CDD:178784"
gene 123962..124567
/gene="rplD"
/locus_tag="Tola_0100"
/db_xref="GeneID:7886088"
CDS 123962..124567
/gene="rplD"
/locus_tag="Tola_0100"
/inference="protein motif:PFAM:PF00573"
/note="L4 is important during the early stages of 50S
assembly; it initially binds near the 5' end of the 23S
rRNA"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L4"
/protein_id="YP_002891316.1"
/db_xref="GI:237806876"
/db_xref="InterPro:IPR002136"
/db_xref="GeneID:7886088"
/translation="MELVLKDAQSALQVSETTFGREFNEALVHQVVVAYAAGARQGTR
AQKTRSEVSGGGKKPWRQKGTGRARAGTIRSPIWRGGGVTFAAKPQDHSQKVNRKMYR
GAIQSILSELVRQDRLVVVEKFGVDAPKTKELLTKLQALDLKDVLIVTPEVEENLFLA
ARNLYKVDVRDVTGIDPVSLIAFDKVLMTADAVKQIEEMLA"
misc_feature 123962..124564
/gene="rplD"
/locus_tag="Tola_0100"
/note="50S ribosomal protein L4; Provisional; Region:
rplD; PRK05319"
/db_xref="CDD:180011"
gene 124564..124869
/gene="rplW"
/locus_tag="Tola_0101"
/db_xref="GeneID:7886089"
CDS 124564..124869
/gene="rplW"
/locus_tag="Tola_0101"
/inference="protein motif:PFAM:PF00276"
/note="binds third domain of 23S rRNA and protein L29;
part of exit tunnel"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L23"
/protein_id="YP_002891317.1"
/db_xref="GI:237806877"
/db_xref="InterPro:IPR013025"
/db_xref="GeneID:7886089"
/translation="MIREERLLKVLKAPHISEKSTMVAEKLNTIVFKVATDATKAEIK
AAVEKLFEVKVEAVRTLNVVGKTKRTGSRMGRRSDWKKAYVTLVEGQDIDFVGGAAE"
misc_feature 124585..124860
/gene="rplW"
/locus_tag="Tola_0101"
/note="50S ribosomal protein L23; Reviewed; Region: rplW;
PRK05738"
/db_xref="CDD:180228"
gene 124884..125705
/gene="rplB"
/locus_tag="Tola_0102"
/db_xref="GeneID:7886090"
CDS 124884..125705
/gene="rplB"
/locus_tag="Tola_0102"
/inference="protein motif:TFAM:TIGR01171"
/note="one of the primary rRNA-binding proteins; required
for association of the 30S and 50S subunits to form the
70S ribosome, for tRNA binding and peptide bond formation"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L2"
/protein_id="YP_002891318.1"
/db_xref="GI:237806878"
/db_xref="InterPro:IPR002171"
/db_xref="InterPro:IPR005880"
/db_xref="GeneID:7886090"
/translation="MAIVKCKPTSPGRRHVVKVVTPELHKGKPFAGLLEEKRKTGGRN
NNGRITTRHIGGGHKQHYRLIDFKRNKDGIPAKIERLEYDPNRSANIALVLYADGERR
YILAPKNLKAGDPIVSGVDAPIKAGNALPMRNIPVGTTVHAVEMKPGKGAQIARSAGA
SVQILAREGAYVTLRLRSGEVRKVLAECRATVGEVGNAEHMLRQLGKAGANRWRGIRP
TVRGMAMNPVDHPHGGGEGRNKGIQPVSPWGTPAKGYRTRSNKRTDKYIVRRRNK"
misc_feature 124884..125702
/gene="rplB"
/locus_tag="Tola_0102"
/note="50S ribosomal protein L2; Validated; Region: rplB;
PRK09374"
/db_xref="CDD:181807"
misc_feature 125007..125237
/gene="rplB"
/locus_tag="Tola_0102"
/note="Ribosomal Proteins L2, RNA binding domain; Region:
Ribosomal_L2; pfam00181"
/db_xref="CDD:109247"
misc_feature 125253..125636
/gene="rplB"
/locus_tag="Tola_0102"
/note="Ribosomal Proteins L2, C-terminal domain; Region:
Ribosomal_L2_C; pfam03947"
/db_xref="CDD:202823"
gene 125727..126005
/locus_tag="Tola_0103"
/db_xref="GeneID:7886091"
CDS 125727..126005
/locus_tag="Tola_0103"
/inference="protein motif:TFAM:TIGR01050"
/note="TIGRFAM: ribosomal protein S19;
PFAM: ribosomal protein S19/S15;
KEGG: asu:Asuc_0463 30S ribosomal protein S19"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S19"
/protein_id="YP_002891319.1"
/db_xref="GI:237806879"
/db_xref="InterPro:IPR002222"
/db_xref="InterPro:IPR005732"
/db_xref="GeneID:7886091"
/translation="MPRSLKKGPFIDLHLLKKVEKAVESADKKPIKTWSRRSMIIPDM
IGLTIAVHNGRQHVPVYVSDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
misc_feature 125727..126002
/locus_tag="Tola_0103"
/note="30S ribosomal protein S19; Reviewed; Region: rpsS;
PRK00357"
/db_xref="CDD:178985"
gene 126013..126360
/gene="rplV"
/locus_tag="Tola_0104"
/db_xref="GeneID:7886092"
CDS 126013..126360
/gene="rplV"
/locus_tag="Tola_0104"
/inference="protein motif:TFAM:TIGR01044"
/note="binds specifically to 23S rRNA during the early
stages of 50S assembly; makes contact with all 6 domains
of the 23S rRNA in the assembled 50S subunit and ribosome;
mutations in this gene result in erythromycin resistance;
located near peptidyl-transferase center"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L22"
/protein_id="YP_002891320.1"
/db_xref="GI:237806880"
/db_xref="InterPro:IPR001063"
/db_xref="InterPro:IPR005727"
/db_xref="GeneID:7886092"
/translation="MMEAIAKHRFARTSAQKARLVADQVRGLPVDRALNLLAFSPKKA
AELIKKVLESAVANAEHNEGADIDTLKVQTIMVDEGPSLKRIRARAKGRADRIVKRTA
HITVVVSDAKAGR"
misc_feature 126022..126336
/gene="rplV"
/locus_tag="Tola_0104"
/note="Ribosomal protein L22/L17e. L22 (L17 in
eukaryotes) is a core protein of the large ribosomal
subunit. It is the only ribosomal protein that interacts
with all six domains of 23S rRNA, and is one of the
proteins important for directing the proper...; Region:
Ribosomal_L22; cd00336"
/db_xref="CDD:48343"
misc_feature order(126022..126027,126091..126099,126103..126108,
126112..126117,126178..126195,126220..126237,
126331..126336)
/gene="rplV"
/locus_tag="Tola_0104"
/note="putative translocon binding site; other site"
/db_xref="CDD:48343"
misc_feature order(126031..126033,126037..126039,126046..126048,
126052..126060,126067..126069,126079..126081,
126088..126090,126172..126174,126184..126186,
126193..126195,126232..126234,126238..126246,
126250..126252,126259..126261,126295..126312)
/gene="rplV"
/locus_tag="Tola_0104"
/note="protein-rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:48343"
gene 126364..127080
/locus_tag="Tola_0105"
/db_xref="GeneID:7886093"
CDS 126364..127080
/locus_tag="Tola_0105"
/inference="protein motif:TFAM:TIGR01009"
/note="KEGG: aha:AHA_0315 ribosomal protein S3;
TIGRFAM: ribosomal protein S3;
PFAM: ribosomal protein S3- domain protein; KH type 2
domain protein; Ribosomal protein S3 domain;
SMART: KH domain protein"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S3"
/protein_id="YP_002891321.1"
/db_xref="GI:237806881"
/db_xref="InterPro:IPR001351"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR004044"
/db_xref="InterPro:IPR004087"
/db_xref="InterPro:IPR004088"
/db_xref="InterPro:IPR005704"
/db_xref="InterPro:IPR008282"
/db_xref="GeneID:7886093"
/translation="MGQKVHPNGIRLGITKPFNSTWYANTKEFADNLHGDFQVRQYLT
KELKAASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRKQIASIAGVPAQIN
IAEVRKPELDSQLVADSISSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
EIARTEWYREGRVPLHTLRADIDYATSEAHTTYGVIGVKVWIFKGEVLGGLAAVTAAA
AAAQQEPAPAKPKRKPRGAK"
misc_feature 126364..126975
/locus_tag="Tola_0105"
/note="ribosomal protein S3, bacterial type; Region:
rpsC_bact; TIGR01009"
/db_xref="CDD:130082"
misc_feature 126367..126690
/locus_tag="Tola_0105"
/note="K homology RNA-binding (KH) domain of the
prokaryotic 30S small ribosomal subunit protein S3. S3 is
part of the head region of the 30S ribosomal subunit and
is believed to interact with mRNA as it threads its way
from the latch into the channel. The KH...; Region:
30S_S3_KH; cd02412"
/db_xref="CDD:48410"
misc_feature 126595..126606
/locus_tag="Tola_0105"
/note="G-X-X-G motif; other site"
/db_xref="CDD:48410"
misc_feature 126718..126969
/locus_tag="Tola_0105"
/note="Ribosomal protein S3, C-terminal domain; Region:
Ribosomal_S3_C; pfam00189"
/db_xref="CDD:201068"
gene 127094..127507
/gene="rplP"
/locus_tag="Tola_0106"
/db_xref="GeneID:7886094"
CDS 127094..127507
/gene="rplP"
/locus_tag="Tola_0106"
/inference="protein motif:TFAM:TIGR01164"
/note="located in the peptidyl transferase center and may
be involved in peptidyl transferase activity; similar to
archaeal L10e"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L16"
/protein_id="YP_002891322.1"
/db_xref="GI:237806882"
/db_xref="InterPro:IPR000114"
/db_xref="GeneID:7886094"
/translation="MLQPKRTKFRKVHKGRNRGLANAGSDVSFGTYGLKAVTRGQLTA
RQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGKV
LYEMDGVPEETAREAFALAAAKLSVKTTFVIRTAM"
misc_feature 127160..127489
/gene="rplP"
/locus_tag="Tola_0106"
/note="Ribosomal_L16_L10e: L16 is an essential protein in
the large ribosomal subunit of bacteria, mitochondria, and
chloroplasts. Large subunits that lack L16 are defective
in peptidyl transferase activity, peptidyl-tRNA hydrolysis
activity, association with...; Region: Ribosomal_L16_L10e;
cd01433"
/db_xref="CDD:88606"
misc_feature order(127160..127162,127166..127171,127178..127180,
127226..127231,127238..127240,127247..127249,
127259..127261,127268..127270,127286..127294,
127298..127300,127304..127306,127316..127321,
127340..127354,127394..127396,127448..127453,
127460..127465)
/gene="rplP"
/locus_tag="Tola_0106"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88606"
misc_feature 127205..127210
/gene="rplP"
/locus_tag="Tola_0106"
/note="5S rRNA interface [nucleotide binding]; other site"
/db_xref="CDD:88606"
misc_feature order(127241..127249,127256..127261)
/gene="rplP"
/locus_tag="Tola_0106"
/note="putative antibiotic binding site [chemical
binding]; other site"
/db_xref="CDD:88606"
misc_feature order(127268..127270,127277..127282,127286..127288,
127412..127414)
/gene="rplP"
/locus_tag="Tola_0106"
/note="L25 interface [polypeptide binding]; other site"
/db_xref="CDD:88606"
misc_feature order(127334..127339,127346..127351)
/gene="rplP"
/locus_tag="Tola_0106"
/note="L27 interface [polypeptide binding]; other site"
/db_xref="CDD:88606"
gene 127507..127698
/locus_tag="Tola_0107"
/db_xref="GeneID:7886095"
CDS 127507..127698
/locus_tag="Tola_0107"
/inference="protein motif:TFAM:TIGR00012"
/note="TIGRFAM: ribosomal protein L29;
PFAM: ribosomal protein L29;
KEGG: aha:AHA_0317 ribosomal protein L29"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L29"
/protein_id="YP_002891323.1"
/db_xref="GI:237806883"
/db_xref="InterPro:IPR001854"
/db_xref="GeneID:7886095"
/translation="MKAQDLRQKSVEELKTELLGLLRAQFNLRIQKSTGQLNQTHTIK
QVRRDIARVKTVLNEKAGA"
misc_feature 127516..127686
/locus_tag="Tola_0107"
/note="Ribosomal L29 protein/HIP. L29 is a protein of the
large ribosomal Subunit. A homolog, called heparin/heparan
sulfate interacting protein (HIP), has also been
identified in mammals. L29 is located on the surface of
the large ribosomal subunit, where it...; Region:
Ribosomal_L29_HIP; cd00427"
/db_xref="CDD:88602"
misc_feature order(127516..127518,127525..127527,127627..127629,
127657..127662,127666..127671,127681..127683)
/locus_tag="Tola_0107"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88602"
misc_feature order(127516..127524,127528..127530,127540..127545,
127549..127554,127561..127566,127573..127578,
127585..127587,127594..127599,127621..127623,
127630..127632,127642..127644,127651..127656,
127663..127668,127675..127677)
/locus_tag="Tola_0107"
/note="putative translocon interaction site; other site"
/db_xref="CDD:88602"
misc_feature order(127564..127566,127576..127578,127585..127587,
127597..127599,127642..127644)
/locus_tag="Tola_0107"
/note="signal recognition particle (SRP54) interaction
site; other site"
/db_xref="CDD:88602"
misc_feature order(127582..127584,127591..127596)
/locus_tag="Tola_0107"
/note="L23 interface [polypeptide binding]; other site"
/db_xref="CDD:88602"
misc_feature 127603..127608
/locus_tag="Tola_0107"
/note="trigger factor interaction site; other site"
/db_xref="CDD:88602"
gene 127698..127946
/locus_tag="Tola_0108"
/db_xref="GeneID:7886096"
CDS 127698..127946
/locus_tag="Tola_0108"
/inference="protein motif:PFAM:PF00366"
/note="PFAM: ribosomal protein S17;
KEGG: aha:AHA_0318 ribosomal protein S17"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S17"
/protein_id="YP_002891324.1"
/db_xref="GI:237806884"
/db_xref="InterPro:IPR000266"
/db_xref="GeneID:7886096"
/translation="MTDQIRTLQGRVVSDKMDKSITVAIERKVKHPMLGKIIVRTTKL
HVHDENNECKTGDLVEIRECRPLSKTKCWTLVSVVEKA"
misc_feature 127698..127943
/locus_tag="Tola_0108"
/note="30S ribosomal protein S17; Reviewed; Region: rpsQ;
PRK05610"
/db_xref="CDD:180162"
gene 128101..128469
/gene="rplN"
/locus_tag="Tola_0109"
/db_xref="GeneID:7886097"
CDS 128101..128469
/gene="rplN"
/locus_tag="Tola_0109"
/inference="protein motif:TFAM:TIGR01067"
/note="binds to the 23S rRNA between the centers for
peptidyl transferase and GTPase"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L14"
/protein_id="YP_002891325.1"
/db_xref="GI:237806885"
/db_xref="InterPro:IPR000218"
/db_xref="InterPro:IPR005745"
/db_xref="GeneID:7886097"
/translation="MIQMQSMLDVADNSGARSVMCIKVLGGSHRRYAGVGDIIKVSIK
EAIPRGKVKKGDVYNAVVVRTRKGVRRQDGSLIRFDRNAAVLLNNQHQPIGTRIFGPV
TRELRNDKFMKIVSLAPEVL"
misc_feature 128101..128466
/gene="rplN"
/locus_tag="Tola_0109"
/note="50S ribosomal protein L14; Validated; Region: rplN;
PRK05483"
/db_xref="CDD:180117"
gene 128482..128799
/gene="rplX"
/locus_tag="Tola_0110"
/db_xref="GeneID:7886098"
CDS 128482..128799
/gene="rplX"
/locus_tag="Tola_0110"
/inference="protein motif:TFAM:TIGR01079"
/note="assembly initiator protein; binds to 5' end of 23S
rRNA and nucleates assembly of the 50S; surrounds
polypeptide exit tunnel"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L24"
/protein_id="YP_002891326.1"
/db_xref="GI:237806886"
/db_xref="InterPro:IPR003256"
/db_xref="InterPro:IPR005824"
/db_xref="InterPro:IPR005825"
/db_xref="GeneID:7886098"
/translation="MAAKIRREDEVIVLTGKDKGKRGKVTKVLVEQGKVIVEGINVKK
KHQKPVPALGVAGGIVSKEAAVDVSNVALFNPATGKGDRVGFRFEDGNKVRFFKSNGE
LVK"
misc_feature 128482..128796
/gene="rplX"
/locus_tag="Tola_0110"
/note="50S ribosomal protein L24; Reviewed; Region: rplX;
PRK00004"
/db_xref="CDD:178786"
misc_feature 128491..128697
/gene="rplX"
/locus_tag="Tola_0110"
/note="50S ribosomal protein L24; Reviewed; Region: rplX;
PRK12281"
/db_xref="CDD:183399"
gene 128813..129352
/locus_tag="Tola_0111"
/db_xref="GeneID:7886099"
CDS 128813..129352
/locus_tag="Tola_0111"
/inference="protein motif:PFAM:PF00281"
/note="PFAM: ribosomal protein L5;
KEGG: plu:plu4714 50S ribosomal protein L5"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L5"
/protein_id="YP_002891327.1"
/db_xref="GI:237806887"
/db_xref="InterPro:IPR002132"
/db_xref="GeneID:7886099"
/translation="MAKLHDTYRQTVVQELMNQFGYNSVMQVPRIEKITLNMGVGEAL
ADKKVLENAAGDLAAISGQKPLITKARKSVAGFKIREGYPIGCKVTLRGERMWEFLER
LICISMPRIRDFRGVSAKSFDGRGNYSMGVREQIIFPEIDYDKVDKVRGLDITITTTA
KTDEEGRALLAAFSFPFRK"
misc_feature 128813..129349
/locus_tag="Tola_0111"
/note="50S ribosomal protein L5; Validated; Region: rplE;
PRK00010"
/db_xref="CDD:178791"
misc_feature 128882..129052
/locus_tag="Tola_0111"
/note="Ribosomal protein L5; Region: Ribosomal_L5;
pfam00281"
/db_xref="CDD:109342"
misc_feature 129062..129346
/locus_tag="Tola_0111"
/note="ribosomal L5P family C-terminus; Region:
Ribosomal_L5_C; pfam00673"
/db_xref="CDD:201383"
gene 129364..129669
/locus_tag="Tola_0112"
/db_xref="GeneID:7886100"
CDS 129364..129669
/locus_tag="Tola_0112"
/inference="protein motif:PFAM:PF00253"
/note="PFAM: ribosomal protein S14;
KEGG: aha:AHA_0322 30S ribosomal protein S14"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S14"
/protein_id="YP_002891328.1"
/db_xref="GI:237806888"
/db_xref="InterPro:IPR001209"
/db_xref="GeneID:7886100"
/translation="MAKLSMIAREDKRAKLIAKHFEKRVALKAIIADVNASDEARWDA
VLKLQQLPRDSSPSRQRNRCNITGRPHGYLRKFGLCRIKVREHMMKGEIPGLKKASW"
misc_feature 129364..129666
/locus_tag="Tola_0112"
/note="30S ribosomal protein S14; Reviewed; Region: rpsN;
PRK08881"
/db_xref="CDD:181574"
gene 129692..130084
/gene="rpsH"
/locus_tag="Tola_0113"
/db_xref="GeneID:7886101"
CDS 129692..130084
/gene="rpsH"
/locus_tag="Tola_0113"
/inference="protein motif:PFAM:PF00410"
/note="binds directly to 16S rRNA central domain where it
helps coordinate assembly of the platform of the 30S
subunit"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S8"
/protein_id="YP_002891329.1"
/db_xref="GI:237806889"
/db_xref="InterPro:IPR000630"
/db_xref="GeneID:7886101"
/translation="MSMQDPIADMLTRIRNGQAAHKVSVSMPSSKLKVAIANLLKEEG
YIADIKVSGDVKPELEIELKYFQGKPVVELIQRVSRPGLRIYKKRGDLPKIMNGLGIA
VVSTSKGVMTDRAARKAGMGGEIICYVA"
misc_feature 129695..130081
/gene="rpsH"
/locus_tag="Tola_0113"
/note="30S ribosomal protein S8; Validated; Region: rpsH;
PRK00136"
/db_xref="CDD:178892"
gene 130096..130629
/gene="rplF"
/locus_tag="Tola_0114"
/db_xref="GeneID:7886102"
CDS 130096..130629
/gene="rplF"
/locus_tag="Tola_0114"
/inference="protein motif:PFAM:PF00347"
/note="ribosomal protein L6 appears to have arisen as a
result of an ancient gene duplication as based on
structural comparison of the Bacillus stearothermophilus
protein; RNA-binding appears to be in the C-terminal
domain; mutations in the L6 gene confer resistance to
aminoglycoside antibiotics such as gentamicin and these
occur in truncations of the C-terminal domain; it has been
localized to a region between the base of the L7/L12 stalk
and the central protuberance"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L6"
/protein_id="YP_002891330.1"
/db_xref="GI:237806890"
/db_xref="InterPro:IPR000702"
/db_xref="InterPro:IPR002358"
/db_xref="GeneID:7886102"
/translation="MSRVAKAPVTIPAGVEVTLNGQEIAVKGKNGTLKRILNAAVIVT
KEENVLKFAPQEGVTGADAQAGTARALVNNMVIGVTTGFERKLVLVGVGYRAQAKGKS
VGLALGFSHPIDHELPEGVTAECPTQTEIVLKSADKAMLGQVAADIRAYRSPEPYKGK
GVRYSDEVVRTKEAKKK"
misc_feature 130096..130626
/gene="rplF"
/locus_tag="Tola_0114"
/note="50S ribosomal protein L6; Validated; Region: rplF;
PRK05498"
/db_xref="CDD:180118"
misc_feature 130126..130341
/gene="rplF"
/locus_tag="Tola_0114"
/note="Ribosomal protein L6; Region: Ribosomal_L6;
pfam00347"
/db_xref="CDD:109407"
misc_feature 130363..130587
/gene="rplF"
/locus_tag="Tola_0114"
/note="Ribosomal protein L6; Region: Ribosomal_L6;
pfam00347"
/db_xref="CDD:109407"
gene 130639..130992
/locus_tag="Tola_0115"
/db_xref="GeneID:7886103"
CDS 130639..130992
/locus_tag="Tola_0115"
/inference="protein motif:TFAM:TIGR00060"
/note="TIGRFAM: ribosomal protein L18;
PFAM: ribosomal protein L18P/L5E;
KEGG: vha:VIBHAR_00746 50S ribosomal protein L18"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L18"
/protein_id="YP_002891331.1"
/db_xref="GI:237806891"
/db_xref="InterPro:IPR004389"
/db_xref="InterPro:IPR005484"
/db_xref="GeneID:7886103"
/translation="MDKKAARIRRATKARRKMLELGATRLVVHRTPRHIYAQVIAASG
AEVLASASTVESTIREQVKYTGNADAAAAVGKAIAERALAKGVTTVAFDRSGFQYHGR
VAALAAAAREAGLQF"
misc_feature 130711..130983
/locus_tag="Tola_0115"
/note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal
protein found in the central protuberance (CP) of the
large subunit. L18 binds 5S rRNA and induces a
conformational change that stimulates the binding of L5 to
5S rRNA. Association of 5S rRNA with 23S rRNA...; Region:
Ribosomal_L18_L5e; cd00432"
/db_xref="CDD:88603"
misc_feature order(130711..130713,130723..130740,130744..130746,
130750..130752,130771..130779,130786..130788,
130909..130911,130942..130944)
/locus_tag="Tola_0115"
/note="5S rRNA interface [nucleotide binding]; other site"
/db_xref="CDD:88603"
misc_feature order(130912..130914,130921..130923,130969..130971)
/locus_tag="Tola_0115"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88603"
misc_feature 130927..130929
/locus_tag="Tola_0115"
/note="L5 interface [polypeptide binding]; other site"
/db_xref="CDD:88603"
gene 131007..131507
/gene="rpsE"
/locus_tag="Tola_0116"
/db_xref="GeneID:7886104"
CDS 131007..131507
/gene="rpsE"
/locus_tag="Tola_0116"
/inference="protein motif:TFAM:TIGR01021"
/note="located at the back of the 30S subunit body where
it stabilizes the conformation of the head with respect to
the body; contacts S4 and S8; with S4 and S12 plays a role
in translational accuracy; mutations in this gene result
in spectinomycin resistance"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S5"
/protein_id="YP_002891332.1"
/db_xref="GI:237806892"
/db_xref="InterPro:IPR005324"
/db_xref="InterPro:IPR005712"
/db_xref="InterPro:IPR013810"
/db_xref="GeneID:7886104"
/translation="MSKIESQAGELQEKLVAVNRVSKVVKGGRIFSFTALTVVGDGSG
RVGFGYGKAREVPAAIQKAMEQARRNMVKVELIEGTLHHHVKGTHAGSTVFMQPASQG
TGIIAGGAMRAVLEVAGVHNVLAKTYGSTNPMNVVRATIEALADIKSPEQVAAKRGLR
VEEILG"
misc_feature 131007..131504
/gene="rpsE"
/locus_tag="Tola_0116"
/note="30S ribosomal protein S5; Validated; Region: rpsE;
PRK00550"
/db_xref="CDD:179061"
misc_feature 131034..131234
/gene="rpsE"
/locus_tag="Tola_0116"
/note="Ribosomal protein S5, N-terminal domain; Region:
Ribosomal_S5; pfam00333"
/db_xref="CDD:144065"
misc_feature 131259..131480
/gene="rpsE"
/locus_tag="Tola_0116"
/note="Ribosomal protein S5, C-terminal domain; Region:
Ribosomal_S5_C; pfam03719"
/db_xref="CDD:190724"
gene 131515..131697
/locus_tag="Tola_0117"
/db_xref="GeneID:7886105"
CDS 131515..131697
/locus_tag="Tola_0117"
/inference="protein motif:TFAM:TIGR01308"
/note="TIGRFAM: ribosomal protein L30;
PFAM: ribosomal protein L30;
KEGG: asa:ASA_4069 ribosomal protein L30"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L30"
/protein_id="YP_002891333.1"
/db_xref="GI:237806893"
/db_xref="InterPro:IPR000517"
/db_xref="InterPro:IPR005996"
/db_xref="GeneID:7886105"
/translation="MANKTVKVTQTRSSIGRLPKHKASLLGLGLRRIGHTVEVEDTPC
VRGMINQVYYMVKVEE"
misc_feature 131530..131691
/locus_tag="Tola_0117"
/note="Ribosomal protein L30, which is found in eukaryotes
and prokaryotes but not in archaea, is one of the smallest
ribosomal proteins with a molecular mass of about 7kDa.
L30 binds the 23SrRNA as well as the 5S rRNA and is one of
five ribosomal proteins that...; Region: Ribosomal_L30;
cd01658"
/db_xref="CDD:100100"
misc_feature order(131548..131553,131557..131562,131566..131574,
131581..131586,131593..131601,131605..131607,
131614..131616,131629..131634,131641..131649,
131653..131658)
/locus_tag="Tola_0117"
/note="23S rRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:100100"
gene 131700..132134
/gene="rplO"
/locus_tag="Tola_0118"
/db_xref="GeneID:7886106"
CDS 131700..132134
/gene="rplO"
/locus_tag="Tola_0118"
/inference="protein motif:TFAM:TIGR01071"
/note="late assembly protein"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L15"
/protein_id="YP_002891334.1"
/db_xref="GI:237806894"
/db_xref="InterPro:IPR001196"
/db_xref="InterPro:IPR005749"
/db_xref="GeneID:7886106"
/translation="MRLNTLSPAAGAKSAKKRVGRGIGSGLGKTGGRGVKGAGSRSGG
GVRAGFEGGQMPLKIRMPKFGFYSRKGAVTAEVRLSEVAKVEGDVVDLNTLKQAGVIT
KGMQFAKIVLSGNIDRAVTVRGVSVTKGARAAIEAAGGKIEE"
misc_feature 131700..132083
/gene="rplO"
/locus_tag="Tola_0118"
/note="50S ribosomal protein L15; Reviewed; Region: rplO;
PRK05592"
/db_xref="CDD:180155"
gene 132142..133473
/gene="secY"
/locus_tag="Tola_0119"
/db_xref="GeneID:7886107"
CDS 132142..133473
/gene="secY"
/locus_tag="Tola_0119"
/inference="protein motif:TFAM:TIGR00967"
/note="forms heterotrimeric complex in the membrane; in
bacteria the complex consists of SecY which forms the
channel pore and SecE and SecG; the SecG subunit is not
essential; in bacteria translocation is driven via the
SecA ATPase"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecY"
/protein_id="YP_002891335.1"
/db_xref="GI:237806895"
/db_xref="InterPro:IPR001356"
/db_xref="InterPro:IPR002208"
/db_xref="GeneID:7886107"
/translation="MAKKPGLVTRGSQGGLSELKSRLLFVLGAIIVFRAGAYVPIPGI
DATVLGQLFQQQKGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVISPYY
AELKKEGESGRRVISKHTRWGTLVLATVQASGIATGLPNMMHGLVLNPGFGFYFTAVV
SLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGLPQAIGATAEQARQGELHILLL
LLLVVIVFAVTYFVVFVERGQRRIVVNYAKRQQGNQIFAAQSTHLPLKLNMAGVIPAI
FASSIILFPGTIASWFGQGDSWIANILQEISMSLQPGQPLYELLYAVAIIFFSFFYTA
LVFNPRETADNLKKSGAFIPGIRPGEQTARFIDKVMTRLTLAGALYITAICLVPQLLM
TFWHVQFYFGGTSLLIIVVVIMDFMAQVQTHMMSHQYGDVLKKANLKGVGR"
misc_feature 132184..133428
/gene="secY"
/locus_tag="Tola_0119"
/note="preprotein translocase subunit SecY; Reviewed;
Region: secY; PRK09204"
/db_xref="CDD:181698"
misc_feature 132367..133392
/gene="secY"
/locus_tag="Tola_0119"
/note="SecY translocase; Region: SecY; pfam00344"
/db_xref="CDD:201169"
gene 133501..133614
/gene="rpmJ"
/locus_tag="Tola_0120"
/db_xref="GeneID:7886108"
CDS 133501..133614
/gene="rpmJ"
/locus_tag="Tola_0120"
/inference="protein motif:TFAM:TIGR01022"
/note="smallest protein in the large subunit; similar to
what is found with protein L31 and L33 several bacterial
genomes contain paralogs which may be regulated by zinc;
the protein from Thermus thermophilus has a zinc-binding
motif and contains a bound zinc ion; the proteins in this
group have the motif"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L36"
/protein_id="YP_002891336.1"
/db_xref="GI:237806896"
/db_xref="InterPro:IPR000473"
/db_xref="GeneID:7886108"
/translation="MKVRASVKAICRNCKIIKRHGVVRVICTEPKHKQRQG"
misc_feature 133501..133611
/gene="rpmJ"
/locus_tag="Tola_0120"
/note="50S ribosomal protein L36; Reviewed; Region: rpmJ;
PRK00465"
/db_xref="CDD:179039"
gene 133755..134111
/gene="rpsM"
/locus_tag="Tola_0121"
/db_xref="GeneID:7886109"
CDS 133755..134111
/gene="rpsM"
/locus_tag="Tola_0121"
/inference="protein motif:PFAM:PF00416"
/note="located at the top of the head of the 30S subunit,
it contacts several helices of the 16S rRNA; makes contact
with the large subunit via RNA-protein interactions and
via protein-protein interactions with L5; contacts P-site
tRNA"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S13"
/protein_id="YP_002891337.1"
/db_xref="GI:237806897"
/db_xref="InterPro:IPR001892"
/db_xref="GeneID:7886109"
/translation="MARIAGINIPDHKHAVIALTAIYGVGDTRAKSICAAAGIAEDVK
VKDLDEAQIEALRTEVGKFTVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRT
KTNARTRKGPRKPIKK"
misc_feature 133755..134108
/gene="rpsM"
/locus_tag="Tola_0121"
/note="30S ribosomal protein S13; Validated; Region: rpsM;
PRK05179"
/db_xref="CDD:179955"
misc_feature 133761..134096
/gene="rpsM"
/locus_tag="Tola_0121"
/note="30S ribosomal protein S13; Region: bact_S13;
TIGR03631"
/db_xref="CDD:211853"
gene 134127..134516
/locus_tag="Tola_0122"
/db_xref="GeneID:7886110"
CDS 134127..134516
/locus_tag="Tola_0122"
/inference="protein motif:PFAM:PF00411"
/note="located on the platform of the 30S subunit, it
bridges several disparate RNA helices of the 16S rRNA;
forms part of the Shine-Dalgarno cleft in the 70S
ribosome; interacts with S7 and S18 and IF-3"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S11"
/protein_id="YP_002891338.1"
/db_xref="GI:237806898"
/db_xref="InterPro:IPR001971"
/db_xref="GeneID:7886110"
/translation="MAKAPTRARKRVRKQVSDGIAHVHASFNNTIVTITDRQGNALSW
ATAGGSGFRGSRKSTPFAAQVAAERAGEIAKEYGVKNLEVMVKGPGPGRESSIRALNA
AGFRITNITDVTPIPHNGCRPPKKRRV"
misc_feature 134130..134513
/locus_tag="Tola_0122"
/note="30S ribosomal protein S11; Validated; Region:
PRK05309"
/db_xref="CDD:180007"
gene 134548..135168
/locus_tag="Tola_0123"
/db_xref="GeneID:7886111"
CDS 134548..135168
/locus_tag="Tola_0123"
/inference="protein motif:TFAM:TIGR01017"
/note="KEGG: asa:ASA_4063 ribosomal protein S4;
TIGRFAM: ribosomal protein S4;
PFAM: ribosomal protein S4; RNA-binding S4 domain protein;
SMART: RNA-binding S4 domain protein"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S4"
/protein_id="YP_002891339.1"
/db_xref="GI:237806899"
/db_xref="InterPro:IPR001912"
/db_xref="InterPro:IPR002942"
/db_xref="InterPro:IPR005709"
/db_xref="GeneID:7886111"
/translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGAR
KPRLSDYGVQLREKQKVRRIYGILEKQFRNYYREATRLKGNTGENLLQLLEGRLDNVV
YRMGFATTRAEARQLVSHKAIVVNGKVVNIPSSQVSPEDVVTVREKAKKQARIKAALD
LAAQREKPTWIEINADKMEGVYKRLPERSDLSADINEQLIVELYSK"
misc_feature 134548..135165
/locus_tag="Tola_0123"
/note="30S ribosomal protein S4; Validated; Region: rpsD;
PRK05327"
/db_xref="CDD:180018"
misc_feature 134551..134832
/locus_tag="Tola_0123"
/note="Ribosomal protein S4/S9 N-terminal domain; Region:
Ribosomal_S4; pfam00163"
/db_xref="CDD:201048"
misc_feature 134836..135033
/locus_tag="Tola_0123"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:29105"
misc_feature order(134836..134838,134872..134877,134881..134886,
134890..134895,134902..134907,134911..134913,
134932..134955,134959..134961)
/locus_tag="Tola_0123"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:29105"
gene 135194..136183
/locus_tag="Tola_0124"
/db_xref="GeneID:7886112"
CDS 135194..136183
/locus_tag="Tola_0124"
/inference="protein motif:TFAM:TIGR02027"
/note="catalyzes the transcription of DNA into RNA using
the four ribonucleoside triphosphates as substrates.
Dimerization of the alpha subunit is the first step in the
sequential assembly of subunits to form the holoenzyme"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit alpha"
/protein_id="YP_002891340.1"
/db_xref="GI:237806900"
/db_xref="InterPro:IPR011260"
/db_xref="InterPro:IPR011261"
/db_xref="InterPro:IPR011262"
/db_xref="InterPro:IPR011263"
/db_xref="InterPro:IPR011773"
/db_xref="GeneID:7886112"
/translation="MLGSVTDFLKPRLVDIEQLSPTHAKVTLEPLERGFGHTLGNALR
RILLSSMPGCAVAEVEIDGVLHEYSSKEGVQEDILEILLNLKGIAVKLEGKDEVILSL
TKSGAGPVTAGDIIHGDDVVIVNPEHVICHLTGANAEISMRLRVQRGRGYVPASARLH
TDDEDRPIGRLLLDAAFSPVVRIAYNVEAARVEQRTDLDKLVIDMETNGTLDPEEAIR
RAATILAEQLDAFVDLRDVSVPEKKEDKPEFDPILLRPVDDLELTVRSANCLKAEAIH
YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASLADN"
misc_feature 135209..136141
/locus_tag="Tola_0124"
/note="DNA-directed RNA polymerase subunit alpha;
Provisional; Region: PRK05182"
/db_xref="CDD:179956"
misc_feature 135233..135886
/locus_tag="Tola_0124"
/note="N-terminal domain of the Alpha subunit of Bacterial
RNA polymerase; Region: RNAP_alpha_NTD; cd06928"
/db_xref="CDD:132904"
misc_feature order(135233..135235,135239..135241,135275..135277,
135284..135286,135290..135298,135305..135307,
135317..135319,135326..135331,135341..135343,
135854..135856,135863..135868,135872..135877,
135881..135886)
/locus_tag="Tola_0124"
/note="alphaNTD homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:132904"
misc_feature order(135266..135268,135302..135304,135314..135316,
135323..135328,135389..135391,135395..135397,
135401..135403,135407..135418,135431..135433,
135449..135451,135593..135595,135647..135649,
135713..135715,135719..135721,135737..135745,
135749..135760,135788..135790,135797..135799,
135803..135805)
/locus_tag="Tola_0124"
/note="alphaNTD - beta interaction site [polypeptide
binding]; other site"
/db_xref="CDD:132904"
misc_feature order(135395..135397,135431..135433,135440..135442,
135449..135454,135644..135649,135653..135655,
135719..135721,135734..135739,135764..135766)
/locus_tag="Tola_0124"
/note="alphaNTD - beta' interaction site [polypeptide
binding]; other site"
/db_xref="CDD:132904"
misc_feature 135920..136120
/locus_tag="Tola_0124"
/note="Bacterial RNA polymerase, alpha chain C terminal
domain; Region: RNA_pol_A_CTD; pfam03118"
/db_xref="CDD:202541"
gene 136227..136613
/locus_tag="Tola_0125"
/db_xref="GeneID:7886113"
CDS 136227..136613
/locus_tag="Tola_0125"
/inference="protein motif:TFAM:TIGR00059"
/note="TIGRFAM: ribosomal protein L17;
PFAM: ribosomal protein L17;
KEGG: shw:Sputw3181_0182 50S ribosomal protein L17"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L17"
/protein_id="YP_002891341.1"
/db_xref="GI:237806901"
/db_xref="InterPro:IPR000456"
/db_xref="GeneID:7886113"
/translation="MRHRLSGRQLNRNASHRQAMFRNMASSLVRHEIIKTTLPKAKEL
RRVVEPLITLAKSDSVANRRLAFARTRDRDVVGKLFTELGPRFQGRPGGYTRILKCGF
RAGDNAPMAYIELVGRPVDAEAVTEE"
misc_feature 136236..136574
/locus_tag="Tola_0125"
/note="50S ribosomal protein L17; Validated; Region: rplQ;
PRK05591"
/db_xref="CDD:180154"
gene 136810..137397
/locus_tag="Tola_0126"
/db_xref="GeneID:7886114"
CDS 136810..137397
/locus_tag="Tola_0126"
/inference="protein motif:PFAM:PF00583"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: ppr:PBPRB1654 putative ribosomal protein
N-acetyltransferase"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_002891342.1"
/db_xref="GI:237806902"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:7886114"
/translation="MLISSRIELKPPSLEWVEPLRLALSESYELHQLFLDWAEPDPSL
LTVTATMNVAKEQFERKEHELRFMIVRREDQALVGSISLHVRDVSVPYYEIGYWVRQS
ATGKGYITEAVLLLADYAFIHLHATRLEIRTAASNDKSRAVAERAGFRLEATLQNACR
TQGHLDDMLVYSRIGHEDMIPEIDLVDISPEELDY"
misc_feature 136825..137259
/locus_tag="Tola_0126"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_3; pfam13302"
/db_xref="CDD:205482"
misc_feature 137023..137259
/locus_tag="Tola_0126"
/note="Acetyltransferase (GNAT) family; Region:
Acetyltransf_1; pfam00583"
/db_xref="CDD:201324"
gene complement(137412..137732)
/locus_tag="Tola_0127"
/db_xref="GeneID:7886115"
CDS complement(137412..137732)
/locus_tag="Tola_0127"
/inference="protein motif:PFAM:PF01340"
/note="when combined with S-adenosylmethionine represses
the expression of the methionine regulon and of proteins
involved in S-adenosylmethionine synthesis"
/codon_start=1
/transl_table=11
/product="transcriptional repressor protein MetJ"
/protein_id="YP_002891343.1"
/db_xref="GI:237806903"
/db_xref="InterPro:IPR002084"
/db_xref="GeneID:7886115"
/translation="MKTAWNGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTR
RQINNLRHATNSELLCEAFLHAYTGQPLPADDDLRKDYPDDIPLAVQQLMAEMGKPIE
KYDE"
misc_feature complement(137418..137726)
/locus_tag="Tola_0127"
/note="Met Repressor, MetJ. MetJ is a bacterial
regulatory protein that uses S-adenosylmethionine (SAM) as
a corepressor to regulate the production of Methionine.
MetJ binds arrays of two to five adjacent copies of an
eight base-pair 'metbox' sequence. MetJ...; Region:
Met_repressor_MetJ; cd00490"
/db_xref="CDD:119402"
misc_feature complement(order(137517..137519,137532..137540,
137544..137549,137553..137558,137565..137567,
137610..137612,137619..137624,137628..137633,
137637..137672,137691..137693,137697..137702))
/locus_tag="Tola_0127"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:119402"
misc_feature complement(order(137565..137573,137607..137609,
137646..137648,137652..137666,137676..137678))
/locus_tag="Tola_0127"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:119402"
misc_feature complement(order(137514..137519,137526..137528,
137532..137540,137544..137552,137559..137561,
137598..137603,137610..137612))
/locus_tag="Tola_0127"
/note="corepressor binding sites; other site"
/db_xref="CDD:119402"
gene 137887..139047
/locus_tag="Tola_0128"
/db_xref="GeneID:7886116"
CDS 137887..139047
/locus_tag="Tola_0128"
/EC_number="2.5.1.48"
/inference="protein motif:TFAM:TIGR02080"
/note="KEGG: aha:AHA_0589 O-succinylhomoserine
(thiol)-lyase;
TIGRFAM: O-succinylhomoserine (thiol)-lyase;
PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent
protein"
/codon_start=1
/transl_table=11
/product="O-succinylhomoserine (thiol)-lyase"
/protein_id="YP_002891344.1"
/db_xref="GI:237806904"
/db_xref="InterPro:IPR000277"
/db_xref="InterPro:IPR011821"
/db_xref="GeneID:7886116"
/translation="MSDYQQETYAVKSGIAVDTQFGAVVPPIYLSTNYTFAGFGEKRE
FDYSRSGNPTRSTLAGALAALEGGAGAVFTGSGMGAINLVTALLSADDLLVAPHDCYG
GTYRLFQHVAAKGSYRVLFVDQTDPEALAQALAQKPKLVWIETPSNPLLRVVDIAAIC
QQAHAVGALVAVDNTFLSPLLQQPLALGADIVVHSTTKYINGHSDVVGGAVIAKETEL
HEKLAWWGNCLGHTGGAFDAYLTLRGLRTLAPRMRAHQENAAAILAYLQQKPQVTKIY
HPGLPDHPGHEIAKRQQKGFGAMLSFEVDFDIEQLKQFLGGLQLFCLAESLGGVESLV
AHPASMTHAGMDPEARRVAGISDQLLRLSVGIEHITDLLADLEQAFACVASK"
misc_feature 137899..139035
/locus_tag="Tola_0128"
/note="O-succinylhomoserine (thiol)-lyase; Region:
O_succ_thio_ly; TIGR02080"
/db_xref="CDD:131135"
misc_feature 137950..139029
/locus_tag="Tola_0128"
/note="CGS_like: Cystathionine gamma-synthase is a PLP
dependent enzyme and catalyzes the committed step of
methionine biosynthesis. This pathway is unique to
microorganisms and plants, rendering the enzyme an
attractive target for the development of...; Region:
CGS_like; cd00614"
/db_xref="CDD:99738"
misc_feature order(137974..137985,137989..137994,138025..138027,
138031..138033,138109..138114,138118..138123,
138187..138189,138202..138204,138211..138213,
138475..138477,138499..138501,138505..138507,
138556..138558,138586..138588,138592..138597,
138832..138834)
/locus_tag="Tola_0128"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99738"
misc_feature order(138112..138120,138187..138189,138316..138318,
138403..138405,138469..138471,138475..138480,
138505..138507)
/locus_tag="Tola_0128"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:99738"
misc_feature order(138112..138120,138187..138189,138403..138405,
138412..138414,138469..138471,138475..138480)
/locus_tag="Tola_0128"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99738"
misc_feature 138478..138480
/locus_tag="Tola_0128"
/note="catalytic residue [active]"
/db_xref="CDD:99738"
gene 139100..141538
/gene="metL"
/locus_tag="Tola_0129"
/db_xref="GeneID:7886117"
CDS 139100..141538
/gene="metL"
/locus_tag="Tola_0129"
/EC_number="2.7.2.4"
/EC_number="1.1.1.3"
/inference="protein motif:TFAM:TIGR00657"
/note="multifunctional homodimeric enzyme that catalyzes
the phosphorylation of aspartate to form
aspartyl-4-phosphate as well as conversion of aspartate
semialdehyde to homoserine; functions in a number of amino
acid biosynthetic pathways"
/codon_start=1
/transl_table=11
/product="bifunctional aspartate kinase II/homoserine
dehydrogenase II"
/protein_id="YP_002891345.1"
/db_xref="GI:237806905"
/db_xref="InterPro:IPR001048"
/db_xref="InterPro:IPR001341"
/db_xref="InterPro:IPR001342"
/db_xref="InterPro:IPR005106"
/db_xref="GeneID:7886117"
/translation="MPHTATGHLPGRQVHKFGGSSLADPNCYRRVAGLIEQESDPRAL
IVVSAAGKTTNRLLQVLELSEAGDDAVVAALNGLRSYQLSLIEDVLDGPARQALSLQL
MEDIDTITGVLKRSYDRYERNGILANGEVWSARLLAALLTERGNPAAWLDARRFLSAE
EGALARVNELLSREKLREVLAGTGEQRVVVTGFIAADSEGRTLLLGRNGSDYSATLLG
ALADAESTAIWSDVAGVYSADPRCVKDAKLLERLSLTEANELARLGAPVLHSRTLQPL
LHSQQKLVLRSSYAPNGGASHILRRKSQVKGARIVTSLDQIALIELRIQPGCDYVDAV
AHLEELLAARQLSPLVSKCQEDRRIVRLAYTLEMVSDAYQFMLQQQEHANVKEVIRRD
GFSLIGLVGTGVCDNAEQCHRFYRLLVDQPLEFIYTSPEGLSLVAVVREITLEPLLIA
LHHAMFLQTKRVGLVVLGKGNIGSQWLKLLAKEKHHVEQAHQLTLTLYGLFDSRGGIL
SDDGLDPLQVLDSFDPQPVIWAELLVQLEQHPFDELIILDLTASETVSSYYPEFAQIG
AHLITANKLAGAAESAFYQRVRQSFAEHQVQWRYNATVGAGLPVQACIRMMLESGDRV
HGISGIFSGTLSWLFQQYDGSVPFSELVDQAWQHGLTEPDPREDLSGHDVRRKLLILA
REAGLELEPDHISLQSLVPVELADIPLEAFFERLTELDKTIVAAFDEAKARGKVLRYV
ARLDRDGSARVGLDMLSAEHPFANLRPCDNIFSIETDFYRTNPLILQGPGAGREVTAA
AVQADLWKICATLR"
misc_feature 139100..141532
/gene="metL"
/locus_tag="Tola_0129"
/note="bifunctional aspartate kinase II/homoserine
dehydrogenase II; Provisional; Region: metL; PRK09466"
/db_xref="CDD:181881"
misc_feature 139136..139993
/gene="metL"
/locus_tag="Tola_0129"
/note="Amino Acid Kinases (AAK) superfamily, catalytic
domain; present in such enzymes like N-acetylglutamate
kinase (NAGK), carbamate kinase (CK), aspartokinase (AK),
glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK
superfamily includes kinases that...; Region: AAK;
cl00452"
/db_xref="CDD:212219"
misc_feature order(139145..139147,139151..139159,139790..139795,
139802..139807)
/gene="metL"
/locus_tag="Tola_0129"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:58599"
misc_feature order(139145..139147,139151..139156,139241..139249,
139724..139732)
/gene="metL"
/locus_tag="Tola_0129"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:58599"
misc_feature 140501..140902
/gene="metL"
/locus_tag="Tola_0129"
/note="Homoserine dehydrogenase, NAD binding domain;
Region: NAD_binding_3; pfam03447"
/db_xref="CDD:202636"
misc_feature 140924..141511
/gene="metL"
/locus_tag="Tola_0129"
/note="Homoserine dehydrogenase; Region: Homoserine_dh;
pfam00742"
/db_xref="CDD:201423"
gene complement(141541..141822)
/locus_tag="Tola_0130"
/db_xref="GeneID:7886118"
CDS complement(141541..141822)
/locus_tag="Tola_0130"
/inference="protein motif:PFAM:PF00708"
/note="PFAM: acylphosphatase;
KEGG: stm:STM1083 putative phosphohydrolase"
/codon_start=1
/transl_table=11
/product="acylphosphatase"
/protein_id="YP_002891346.1"
/db_xref="GI:237806906"
/db_xref="InterPro:IPR001792"
/db_xref="GeneID:7886118"
/translation="MTPPRSVRIQVYGIVQGVGFRYFTQQEASRLGLCGRATNLSDGS
VEVLAQGDAQAVEKLIHWLKTGPRTASVDYIEITELAAGAVNASSFRAY"
misc_feature complement(141577..141813)
/locus_tag="Tola_0130"
/note="Acylphosphatase; Region: Acylphosphatase;
pfam00708"
/db_xref="CDD:201408"
gene 141994..142824
/locus_tag="Tola_0131"
/db_xref="GeneID:7886119"
CDS 141994..142824
/locus_tag="Tola_0131"
/EC_number="3.2.2.23"
/inference="protein motif:TFAM:TIGR00577"
/note="KEGG: aha:AHA_0164 formamidopyrimidine-DNA
glycosylase;
TIGRFAM: formamidopyrimidine-DNA glycosylase;
PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding;
Formamidopyrimidine-DNA glycosylase catalytic domain
protein"
/codon_start=1
/transl_table=11
/product="formamidopyrimidine-DNA glycosylase"
/protein_id="YP_002891347.1"
/db_xref="GI:237806907"
/db_xref="InterPro:IPR000191"
/db_xref="InterPro:IPR000214"
/db_xref="InterPro:IPR012319"
/db_xref="InterPro:IPR015886"
/db_xref="InterPro:IPR015887"
/db_xref="GeneID:7886119"
/translation="MPELPEVEVSRLGITPWMEGIVVERVVIRHPRLRWPIPSEIRLL
EGQPLRQIERRAKYLLLRSTLGTAILHLGMSGRLRILPIGTPAEKHDHVDLELANGKL
LRFHDPRRFGALLWTAEDPYQHPLLKTLGPEPLTDAFTADYLWQRSRKPRSAIKPWLM
DNRVVVGVGNIYANEALFMAHIHPKRAVNSLTPEESQALVAAVKKVLARAITQGGTTL
RDFMRTDGKPGYFVQELLVYGRAGQPCTVCAHPLEELRLGQRSSVYCPICQPFAGGYD
"
misc_feature 141994..142803
/locus_tag="Tola_0131"
/note="formamidopyrimidine/5-formyluracil/
5-hydroxymethyluracil DNA glycosylase; Validated; Region:
PRK01103"
/db_xref="CDD:179222"
misc_feature 141997..142347
/locus_tag="Tola_0131"
/note="N-terminal domain of Escherichia coli Fpg1/MutM and
related bacterial DNA glycosylases; Region: EcFpg-like_N;
cd08966"
/db_xref="CDD:176800"
misc_feature order(141997..142002,142162..142164,142204..142206,
142210..142218,142258..142263,142315..142326)
/locus_tag="Tola_0131"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:176800"
misc_feature 141997..141999
/locus_tag="Tola_0131"
/note="catalytic residue [active]"
/db_xref="CDD:176800"
misc_feature order(142000..142011,142015..142020,142027..142029,
142153..142164,142216..142218)
/locus_tag="Tola_0131"
/note="H2TH interface [polypeptide binding]; other site"
/db_xref="CDD:176800"
misc_feature order(142000..142002,142162..142164)
/locus_tag="Tola_0131"
/note="putative catalytic residues [active]"
/db_xref="CDD:176800"
misc_feature 142204..142206
/locus_tag="Tola_0131"
/note="turnover-facilitating residue; other site"
/db_xref="CDD:176800"
misc_feature order(142213..142215,142318..142320,142324..142326)
/locus_tag="Tola_0131"
/note="intercalation triad [nucleotide binding]; other
site"
/db_xref="CDD:176800"
misc_feature 142216..142218
/locus_tag="Tola_0131"
/note="8OG recognition residue [nucleotide binding]; other
site"
/db_xref="CDD:176800"
misc_feature order(142261..142263,142321..142323)
/locus_tag="Tola_0131"
/note="putative reading head residues; other site"
/db_xref="CDD:176800"
misc_feature 142381..142659
/locus_tag="Tola_0131"
/note="Formamidopyrimidine-DNA glycosylase H2TH domain;
Region: H2TH; pfam06831"
/db_xref="CDD:115485"
misc_feature 142717..142803
/locus_tag="Tola_0131"
/note="Zinc finger found in FPG and IleRS; Region:
zf-FPG_IleRS; pfam06827"
/db_xref="CDD:203527"
gene complement(142815..143309)
/locus_tag="Tola_0132"
/db_xref="GeneID:7886120"
CDS complement(142815..143309)
/locus_tag="Tola_0132"
/EC_number="2.7.7.3"
/inference="protein motif:TFAM:TIGR01510"
/note="KEGG: aha:AHA_0166 phosphopantetheine
adenylyltransferase;
TIGRFAM: pantetheine-phosphate adenylyltransferase;
cytidyltransferase-related domain protein;
PFAM: cytidylyltransferase"
/codon_start=1
/transl_table=11
/product="pantetheine-phosphate adenylyltransferase"
/protein_id="YP_002891348.1"
/db_xref="GI:237806908"
/db_xref="InterPro:IPR001980"
/db_xref="InterPro:IPR004820"
/db_xref="InterPro:IPR004821"
/db_xref="GeneID:7886120"
/translation="MRQKVVFPGTFDPLTSGHFDLINRASILFDEVILAVAASPGKRP
LFSLEERLALAKEVCQSLPNVTITGFSNLLIDFMKEQQATILLRGIRTGSDFEYESQL
AAMYRRMMPEMEIIFLPPAEQYAFVSSTLVREIALHGGDAGQFVTPNVAEAIKAKQLQ
LAQS"
misc_feature complement(142839..143309)
/locus_tag="Tola_0132"
/note="phosphopantetheine adenylyltransferase;
Provisional; Region: coaD; PRK00168"
/db_xref="CDD:178911"
misc_feature complement(142842..143300)
/locus_tag="Tola_0132"
/note="Phosphopantetheine adenylyltransferase; Region:
PPAT; cd02163"
/db_xref="CDD:173914"
misc_feature complement(order(142929..142931,142938..142940,
142950..142952,142992..142994,143004..143006,
143013..143018,143037..143039,143043..143048,
143088..143096,143184..143186,143199..143201,
143247..143249,143256..143261,143277..143291))
/locus_tag="Tola_0132"
/note="active site"
/db_xref="CDD:173914"
misc_feature complement(143256..143267)
/locus_tag="Tola_0132"
/note="(T/H)XGH motif; other site"
/db_xref="CDD:173914"
gene 143453..143836
/locus_tag="Tola_0133"
/db_xref="GeneID:7886121"
CDS 143453..143836
/locus_tag="Tola_0133"
/inference="similar to AA sequence:KEGG:Rfer_2525"
/note="KEGG: rfr:Rfer_2525 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891349.1"
/db_xref="GI:237806909"
/db_xref="GeneID:7886121"
/translation="MSAFWGVMARLLVVSLLALSLPAKASMMSAQETMSVHQTSERTQ
VMQFLAREDVAKHIAAQGVDIALVQQRVAAMSDDEINQLSDKIDQLPAAGNAVLGAVV
FVFVLLLVTDILGLTKVFPFTRSVR"
gene 143840..144766
/locus_tag="Tola_0134"
/db_xref="GeneID:7886122"
CDS 143840..144766
/locus_tag="Tola_0134"
/inference="similar to AA sequence:KEGG:azo0531"
/note="KEGG: azo:azo0531 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891350.1"
/db_xref="GI:237806910"
/db_xref="InterPro:IPR013026"
/db_xref="GeneID:7886122"
/translation="MRLIIQALLLVGFLFLSACAQRPVISASAVSSSYKQLSVPFIQQ
DDAYCGPSALAMVLAEQNKTVSVSDLAQEMLLPARGGSLQAELKASVRRQGYLAYEIK
PELPALLAEIDEGRPVIVLLNLAFNWYPKWHYAVVTGYDLSHQEIILHSGSLANQRWT
FTQFDNLWQRGGRWGLLALSPVQLPPASAQEDRYLQAVLDLEKTSGSAIAQSAYQTAL
QRWPDNLTALIGLGLAAYQQQDLLLARQWFQRAAIQHPSSAVAANNLAQTLLESGEPA
EAFVWAQKAVLADGGAPARDTLQQVLRALHAE"
misc_feature 143954..144262
/locus_tag="Tola_0134"
/note="Peptidase_C39 like family; Region: Peptidase_C39_2;
pfam13529"
/db_xref="CDD:205707"
misc_feature 143966..144376
/locus_tag="Tola_0134"
/note="A sub-family of peptidase family C39. Peptidase
family C39 mostly contains bacteriocin-processing
endopeptidases from bacteria. The cysteine peptidases in
family C39 cleave the 'double-glycine' leader peptides
from the precursors of various bacteriocins; Region:
Peptidase_C39A; cd02549"
/db_xref="CDD:30278"
misc_feature order(143984..143986,144236..144238,144287..144289)
/locus_tag="Tola_0134"
/note="putative active site [active]"
/db_xref="CDD:30278"
gene 144835..145554
/locus_tag="Tola_0135"
/db_xref="GeneID:7886123"
CDS 144835..145554
/locus_tag="Tola_0135"
/inference="protein motif:PFAM:PF06293"
/note="catalyzes the phosphorylation of
3-deoxy-D-manno-octulosonic acid at the 4-OH position"
/codon_start=1
/transl_table=11
/product="3-deoxy-D-manno-octulosonic-acid kinase"
/protein_id="YP_002891351.1"
/db_xref="GI:237806911"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR010440"
/db_xref="GeneID:7886123"
/translation="MTASRILKSAGQICCFDPLLAPDFTPDYFSAEYWQQQNAITGKS
HGRGVTWFLQHHSAHWVLRHYWRGGLIGRYIPDQFFYTGLSSSRAFAEFNLLQRLVED
ELPVPRPVAARMVRQRWYYQADILIERIPEAEDLVQILKREALSRETWQQIGQVLAQF
HQAGVYHSDLNAHNILRDANGKIWLIDFDKGAIRRPGRWQTKNLARLLRSLQKESALH
PLFHWQTDDWQNLLVAYHSYR"
misc_feature 144847..145545
/locus_tag="Tola_0135"
/note="3-deoxy-D-manno-octulosonic-acid kinase; Reviewed;
Region: PRK01723"
/db_xref="CDD:179326"
misc_feature order(145153..145155,145213..145224,145234..145236,
145354..145356,145360..145362,145390..145395)
/locus_tag="Tola_0135"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:88273"
gene complement(145557..146864)
/locus_tag="Tola_0136"
/db_xref="GeneID:7886124"
CDS complement(145557..146864)
/locus_tag="Tola_0136"
/inference="protein motif:PFAM:PF04413"
/note="catalyzes the transfer of
2-keto-3-deoxy-D-manno-octulosonic acid to lipid A"
/codon_start=1
/transl_table=11
/product="3-deoxy-D-manno-octulosonic-acid transferase"
/protein_id="YP_002891352.1"
/db_xref="GI:237806912"
/db_xref="InterPro:IPR001296"
/db_xref="InterPro:IPR007507"
/db_xref="GeneID:7886124"
/translation="MIGFSDTVAQTLCRSLSMRLLYTFLIYLLLPVILFLLYRPQRGK
PGFGSRWKEHFGFVTAPNARFPLWIHAVSVGETIAVTPLIKALKQQHPDLPILLTTTT
RTGADQAARLGDLVEHRYAPLDYPGAVARFLQQIKPRALLIMETELWPNLLASCGHRK
IPVVILNARLSERSCQRYQHIRHFFQQMSHSLTLLLCQHHEDAARFKRLGVAEQQIAV
TGSIKFDIQLDQKQIEAGEQYRQELNHRPVWIAASTHKGEDELILRAHRQILQQIPDT
LLLLVPRHPERFTDVAQLCQNQGFTLCRRSEQRTATSDENILLGDSMGEMAYYFQIAD
LAFMGGSLVPVGGHNLLEPAALAKPTLIGPHFFNFNDITRQLVEKKACYIIQNDDELA
RNVITLLRSEEQRLEMGMVGFDVVAANQGAIAKSLAAISKIVQ"
misc_feature complement(145602..146741)
/locus_tag="Tola_0136"
/note="3-deoxy-D-manno-octulosonic-acid transferase [Cell
envelope biogenesis, outer membrane]; Region: KdtA;
COG1519"
/db_xref="CDD:31708"
misc_feature complement(146181..146726)
/locus_tag="Tola_0136"
/note="3-Deoxy-D-manno-octulosonic-acid transferase
(kdotransferase); Region: Glycos_transf_N; pfam04413"
/db_xref="CDD:203003"
misc_feature complement(145638..146102)
/locus_tag="Tola_0136"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region:
Glycosyltransferase_GTB_type; cl10013"
/db_xref="CDD:212618"
gene 147246..148361
/locus_tag="Tola_0137"
/db_xref="GeneID:7886125"
CDS 147246..148361
/locus_tag="Tola_0137"
/inference="protein motif:PFAM:PF01094"
/note="PFAM: Extracellular ligand-binding receptor;
KEGG: asa:ASA_4279 ABC-type branched-chain amino acid
transporter, periplasmic binding protein"
/codon_start=1
/transl_table=11
/product="extracellular ligand-binding receptor"
/protein_id="YP_002891353.1"
/db_xref="GI:237806913"
/db_xref="InterPro:IPR000709"
/db_xref="InterPro:IPR001828"
/db_xref="GeneID:7886125"
/translation="MKKMSKLIVAAAVSTALFGTASAMAEETIKVGIAGPVTGPVAQY
GDMEFTGGLMAVEQINAAGGIKGKKLEAIKYDDACDPKQAVAVANKVVNDGVKYVIGH
LCSDSTLPSSDVYEDEGILMITPAATAPKITQRDYQLVLRTTGLDSDQGPTAANYITS
VIKPKTIAVIHDKKQYGEGIATSVYETLKKNGANVVDFEGVTAGDKDFSALIAKLKKL
NVDFVYYGGYHPELGLILRQSAEKGFTAKYMGPEGVGNKDISAIAGKASEGMYVTMLK
KYDEDPANAKIVEAFKAKKQDYSGPFVWTTYAAVQSLAAGLNAAGEEPADIADYLRAN
KVDTVMGPLEWSASGDLKNFKFGVYQWHADGTSSVLQ"
misc_feature 147246..148358
/locus_tag="Tola_0137"
/note="leucine ABC transporter subunit substrate-binding
protein LivK; Provisional; Region: PRK15404"
/db_xref="CDD:185302"
misc_feature 147333..148328
/locus_tag="Tola_0137"
/note="Type I periplasmic ligand-binding domain of ABC
(Atpase Binding Cassette)-type active transport systems
that are involved in the transport of all three branched
chain aliphatic amino acids (leucine, isoleucine and
valine); Region: PBP1_ABC_LIVBP_like; cd06342"
/db_xref="CDD:107337"
misc_feature order(147354..147356,147381..147383,147393..147395,
147402..147404,147954..147956,148017..148019,
148026..148028,148035..148040,148128..148130)
/locus_tag="Tola_0137"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107337"
misc_feature order(147552..147560,147621..147626,147771..147773,
147927..147929,147999..148001)
/locus_tag="Tola_0137"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107337"
gene 148482..149402
/locus_tag="Tola_0138"
/db_xref="GeneID:7886126"
CDS 148482..149402
/locus_tag="Tola_0138"
/inference="protein motif:PFAM:PF02653"
/note="PFAM: inner-membrane translocator;
KEGG: asa:ASA_4280 ABC-type branched-chain amino acid
transporter, permease protein"
/codon_start=1
/transl_table=11
/product="inner-membrane translocator"
/protein_id="YP_002891354.1"
/db_xref="GI:237806914"
/db_xref="InterPro:IPR001851"
/db_xref="GeneID:7886126"
/translation="MSEQIFYFIQQLLNGLTIGSTYALIAIGYTMVYGIIGMINFAHG
EVYMIGSYIGFMVITALMMMGIDSSVLLMGAAFIVSILITSCYGWSIERVAYRPLRGS
NRLIPLISAIGMSIFLQNLVRFAQGSRDIAMPSLVQGGIEFGPGNAASLSYMQIIIFV
VTFISMYGLSKFISRSRMGRACRACAEDIKMANLLGIDTNSVIALTFVIGAALASIAG
ILLGLYYGVINPSLGFMAGLKAFTAAVLGGIGSIPGAMIGGLILGVTEALTSAYLSSE
YKDVVAFGLLIAILLLMPTGILGRPEVEKV"
misc_feature 148524..149375
/locus_tag="Tola_0138"
/note="Transmembrane subunit (TM) of Escherichia coli LivH
and related proteins. LivH is one of two TMs of the E.
coli LIV-1/LS transporter, a Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette (ABC) transporter
involved in the uptake of...; Region: TM_PBP1_LivH_like;
cd06582"
/db_xref="CDD:119324"
misc_feature 149049..149105
/locus_tag="Tola_0138"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119324"
gene 149399..150646
/gene="livM"
/locus_tag="Tola_0139"
/db_xref="GeneID:7886127"
CDS 149399..150646
/gene="livM"
/locus_tag="Tola_0139"
/inference="protein motif:PFAM:PF02653"
/note="Part of the ABC transporter complex LivFGHMJ and
LivFGHMK involved in the high-affinity transport of
branched-chain amino acids; LivFGHMK is specific for the
transport of leucine, while LivFGHMJ is a transporter for
leucine, isoleucine, and valine"
/codon_start=1
/transl_table=11
/product="leucine/isoleucine/valine transporter permease
subunit"
/protein_id="YP_002891355.1"
/db_xref="GI:237806915"
/db_xref="InterPro:IPR001851"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7886127"
/translation="MKHLKQASVAGLLTLILTLWLFCYQLQTEGVGITVVSRLQENGP
LIALAVVVVFLFQLFRDQISGGFSALKESVPVLSLPTTTGNPRLYRILQLLLLAGVLL
IACFASRNLLDLGTLILIYVMLGLGLNIQVGLAGLLDLGYVGFYAIGAYTYALLNQYL
GLSFWICLPLAGGMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIMLNNLTTITGG
PNGISGIPKPTLFGLEFSRRAEDGGRTFHEFFGISYDANYKIIFLYVMAVLLVLLTLL
VIKRLLRMPLGRAWEALRDDEIACRSLGLNPTIIKLTAFSIGAAFAGFAGSFFAARQG
FISPESFTFIESAIILAIVVLGGMGSLAGVVLAAIIMTVLPELRAFNEYRMLMFGLLM
VVMMLWRPQGLVPMTRHHVELPK"
misc_feature 149399..150643
/gene="livM"
/locus_tag="Tola_0139"
/note="leucine/isoleucine/valine transporter permease
subunit; Provisional; Region: livM; PRK11301"
/db_xref="CDD:183081"
misc_feature 149750..150613
/gene="livM"
/locus_tag="Tola_0139"
/note="Transmembrane subunit (TM) of Escherichia coli LivM
and related proteins. LivM is one of two TMs of the E.
coli LIV-1/LS transporter, a Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette (ABC) transporter
involved in the uptake of...; Region: TM_PBP1_LivM_like;
cd06581"
/db_xref="CDD:119323"
misc_feature 150290..150346
/gene="livM"
/locus_tag="Tola_0139"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119323"
gene 150643..151407
/gene="livG"
/locus_tag="Tola_0140"
/db_xref="GeneID:7886128"
CDS 150643..151407
/gene="livG"
/locus_tag="Tola_0140"
/inference="protein motif:PFAM:PF00005"
/note="Part of the ABC transporter complexes LivFGHMJ and
LivFGHMK involved in the high-affinity transport of
branched-chain amino acids; LivFGHMK is specific for the
transport of leucine, while LivFGHMJ is a transporter for
leucine, isoleucine, and valine"
/codon_start=1
/transl_table=11
/product="leucine/isoleucine/valine transporter
ATP-binding subunit"
/protein_id="YP_002891356.1"
/db_xref="GI:237806916"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7886128"
/translation="MSKLLEVSDLSMRFGGLLAVNGVKLQLKEKEIVSIIGPNGAGKT
TVFNCLTGFYKPTNGIIRFRGEEIQGLPGHEIARKGVVRTFQHVRLFKEMTVLENLLV
AQHRHMNTNFIAGLLKTPAFRRSEREALERAKFWLDTIGLTDLSNRSAGNLAYGQQRR
LEIARCMCTQPKILMLDEPAAGLNPKETEDLNNLIRQLRDQFDVSVLLIEHDMKLVMD
ISDHIFVVNQGTPLADGKPAEVRDNPAVIKAYLGES"
misc_feature 150643..151404
/gene="livG"
/locus_tag="Tola_0140"
/note="leucine/isoleucine/valine transporter ATP-binding
subunit; Provisional; Region: livG; PRK11300"
/db_xref="CDD:183080"
misc_feature 150655..151380
/gene="livG"
/locus_tag="Tola_0140"
/note="The Mj1267/LivG ABC transporter subfamily is
involved in the transport of the hydrophobic amino acids
leucine, isoleucine and valine. MJ1267 is a
branched-chain amino acid transporter with 29% similarity
to both the LivF and LivG components of the E; Region:
ABC_Mj1267_LivG_branched; cd03219"
/db_xref="CDD:72978"
misc_feature 150751..150774
/gene="livG"
/locus_tag="Tola_0140"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72978"
misc_feature order(150760..150765,150769..150777,150898..150900,
151171..151176,151273..151275)
/gene="livG"
/locus_tag="Tola_0140"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72978"
misc_feature 150889..150900
/gene="livG"
/locus_tag="Tola_0140"
/note="Q-loop/lid; other site"
/db_xref="CDD:72978"
misc_feature 151099..151128
/gene="livG"
/locus_tag="Tola_0140"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72978"
misc_feature 151159..151176
/gene="livG"
/locus_tag="Tola_0140"
/note="Walker B; other site"
/db_xref="CDD:72978"
misc_feature 151183..151194
/gene="livG"
/locus_tag="Tola_0140"
/note="D-loop; other site"
/db_xref="CDD:72978"
misc_feature 151261..151281
/gene="livG"
/locus_tag="Tola_0140"
/note="H-loop/switch region; other site"
/db_xref="CDD:72978"
gene 151418..152125
/locus_tag="Tola_0141"
/db_xref="GeneID:7886129"
CDS 151418..152125
/locus_tag="Tola_0141"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter related;
SMART: AAA ATPase;
KEGG: aha:AHA_0109 high-affinity branched-chain amino acid
ABC transporter, ATP-binding protein LivF"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002891357.1"
/db_xref="GI:237806917"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7886129"
/translation="MLEVKNVSTFYGKIAALTDVSVHIKKGEIVSLIGANGAGKTTLL
MTICGDPKPSQGQIIFEGRDITQDSTSTIMRGDIAIVPEGRRIFSRLTVEENLSMGAF
FINDKAEKVALMDEVFNLFPRLKERINQRAGTMSGGEQQMLAIGRALMSKPRLLFLDE
PSLGLAPLVIQQIFDIVQQLREERGMTIFLVEQNANQALKLADRGYVLETGRIVLEDT
GAALLANPAVRNAYLGG"
misc_feature 151418..152122
/locus_tag="Tola_0141"
/note="leucine/isoleucine/valine transporter ATP-binding
subunit; Provisional; Region: livF; PRK11614"
/db_xref="CDD:183231"
misc_feature 151421..152092
/locus_tag="Tola_0141"
/note="LivF (TM1139) is part of the LIV-I bacterial
ABC-type two-component transport system that imports
neutral, branched-chain amino acids. The E. coli
branched-chain amino acid transporter comprises a
heterodimer of ABC transporters (LivF and LivG), a...;
Region: ABC_TM1139_LivF_branched; cd03224"
/db_xref="CDD:72983"
misc_feature 151517..151540
/locus_tag="Tola_0141"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72983"
misc_feature order(151526..151531,151535..151543,151664..151666,
151892..151897,151994..151996)
/locus_tag="Tola_0141"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72983"
misc_feature 151655..151666
/locus_tag="Tola_0141"
/note="Q-loop/lid; other site"
/db_xref="CDD:72983"
misc_feature 151820..151849
/locus_tag="Tola_0141"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72983"
misc_feature 151880..151897
/locus_tag="Tola_0141"
/note="Walker B; other site"
/db_xref="CDD:72983"
misc_feature 151904..151915
/locus_tag="Tola_0141"
/note="D-loop; other site"
/db_xref="CDD:72983"
misc_feature 151982..152002
/locus_tag="Tola_0141"
/note="H-loop/switch region; other site"
/db_xref="CDD:72983"
gene 152195..152515
/locus_tag="Tola_0142"
/db_xref="GeneID:7886130"
CDS 152195..152515
/locus_tag="Tola_0142"
/EC_number="2.8.1.1"
/inference="protein motif:PRIAM:2.8.1.1"
/note="KEGG: aha:AHA_0106 thiosulfate sulfurtransferase
GlpE;
PFAM: Rhodanese domain protein;
SMART: Rhodanese domain protein"
/codon_start=1
/transl_table=11
/product="thiosulfate sulfurtransferase"
/protein_id="YP_002891358.1"
/db_xref="GI:237806918"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:7886130"
/translation="MSQFTRISIQQAAALLQLPSVCLADIRDPSSFNAAHVTGAFHLT
NDTLPQFTQQITKETPVLVMCYHGNSSQGVANYLTSIGYEKVYSIDGGFEGWRHVYPY
TATV"
misc_feature 152210..152485
/locus_tag="Tola_0142"
/note="GlpE sulfurtransferase (ST) and homologs are
members of the Rhodanese Homology Domain superfamily.
Unlike other rhodanese sulfurtransferases, GlpE is a
single domain protein but indications are that it
functions as a dimer. The active site contains a...;
Region: GlpE_ST; cd01444"
/db_xref="CDD:29075"
misc_feature 152387..152389
/locus_tag="Tola_0142"
/note="active site residue [active]"
/db_xref="CDD:29075"
gene 152512..153342
/locus_tag="Tola_0143"
/db_xref="GeneID:7886131"
CDS 152512..153342
/locus_tag="Tola_0143"
/inference="protein motif:PFAM:PF01694"
/note="PFAM: Rhomboid family protein;
KEGG: asa:ASA_4287 GlpG protein"
/codon_start=1
/transl_table=11
/product="rhomboid family protein"
/protein_id="YP_002891359.1"
/db_xref="GI:237806919"
/db_xref="InterPro:IPR002610"
/db_xref="GeneID:7886131"
/translation="MIQLIQLNDPHLAQMLADYLQTQNMPCQVQSSETGISVWLLDET
KTSAAEREVQRFILEPHHPRYREAAWQQEKPATWRSATDSSLMTELMLQAQPLMLVVS
FLMIAVFLLYWLTIPVESLLTFEWPWQRGQIWRLFTPVFLHFSVLHLVFNLAWWWYLG
GRTEQRYGVIKLAIVLISGALIPNVLQAMVSGSLFGGMSGVTYALLGYLWLRERNSED
PSQVTVSNGLFIFMLVWLVLGFTNLLGFNTANLAHLGGLLVGLIQGWRDSHRTISGPA
"
misc_feature 152512..152811
/locus_tag="Tola_0143"
/note="Protein of unknown function (DUF3582); Region:
DUF3582; pfam12122"
/db_xref="CDD:204828"
misc_feature 152518..153321
/locus_tag="Tola_0143"
/note="rhomboid family protease GlpG; Region: rhombo_GlpG;
TIGR04239"
/db_xref="CDD:211962"
misc_feature 152896..153321
/locus_tag="Tola_0143"
/note="Rhomboid family; Region: Rhomboid; pfam01694"
/db_xref="CDD:201925"
gene 153538..154059
/locus_tag="Tola_0144"
/db_xref="GeneID:7886132"
CDS 153538..154059
/locus_tag="Tola_0144"
/inference="protein motif:PFAM:PF04345"
/note="PFAM: Chorismate lyase;
KEGG: amc:MADE_00071 hypothetical chorismate pyruvate
lyase"
/codon_start=1
/transl_table=11
/product="chorismate lyase"
/protein_id="YP_002891360.1"
/db_xref="GI:237806920"
/db_xref="InterPro:IPR007440"
/db_xref="GeneID:7886132"
/translation="MLHVSSLDDLGWSSASALMLEKKQTDWLLDPGSLTARLQQHTNT
LSLQLLTAGWQSKDQDTSQLVRQVLLSDGERPWIWGLTQVDACQLQKESELLNWSTQP
LGQLLFAEEQSNVRCFDIADFATSAEFCQMLPRWGCIQTRPLWGRRCELQFRSCRLLL
TEVFLPEHPMYGV"
misc_feature 153595..154053
/locus_tag="Tola_0144"
/note="UTRA domain; Region: UTRA; cl01230"
/db_xref="CDD:207347"
gene 154062..154922
/locus_tag="Tola_0145"
/db_xref="GeneID:7886133"
CDS 154062..154922
/locus_tag="Tola_0145"
/inference="protein motif:TFAM:TIGR01474"
/note="TIGRFAM: 4-hydroxybenzoate polyprenyl transferase;
PFAM: UbiA prenyltransferase;
KEGG: yen:YE3858 4-hydroxybenzoate octaprenyltransferase"
/codon_start=1
/transl_table=11
/product="4-hydroxybenzoate polyprenyltransferase"
/protein_id="YP_002891361.1"
/db_xref="GI:237806921"
/db_xref="InterPro:IPR000537"
/db_xref="InterPro:IPR006370"
/db_xref="GeneID:7886133"
/translation="MMSVIPAQWQPYWQLARLDKPIGTLLLLWPTLWALWLASAGVPS
FSLLLIFTAGVFVMRSAGCVINDYADRKFDGYVKRTASRPLPAGRLTAVRALLFFLLL
VLIAFVLVWQLNQFTIYLSVGGLLLAAIYPFMKRVTSLPQVVLGMAFSWAIPMAYGAV
VGQLTVTTWLLFLANLVWTIAYDTMYAMVDRDDDLKIGVKSTAILFGQNDRLYIALLQ
LGTLTLLAIIGWLEQLTVSYYFSLLLAAGLFIYQQWLIRHRQRDACFRAFLNNNWVGM
LIFAGIMLAC"
misc_feature 154077..154916
/locus_tag="Tola_0145"
/note="4-hydroxybenzoate octaprenyltransferase; Reviewed;
Region: ubiA; PRK12848"
/db_xref="CDD:183790"
gene 155009..155629
/locus_tag="Tola_0146"
/db_xref="GeneID:7886134"
CDS 155009..155629
/locus_tag="Tola_0146"
/EC_number="3.4.21.88"
/inference="protein motif:TFAM:TIGR00498"
/note="KEGG: aha:AHA_0183 LexA repressor;
TIGRFAM: LexA repressor;
PFAM: LexA DNA-binding domain protein; peptidase S24 and
S26 domain protein"
/codon_start=1
/transl_table=11
/product="SOS-response transcriptional repressor, LexA"
/protein_id="YP_002891362.1"
/db_xref="GI:237806922"
/db_xref="InterPro:IPR006197"
/db_xref="InterPro:IPR006199"
/db_xref="InterPro:IPR006200"
/db_xref="InterPro:IPR011056"
/db_xref="GeneID:7886134"
/translation="MKQLTPRQAEVLALIRSAVQQTGMPPTRAEIASELGFKSANAAE
EHLKALARKGVIRMMPGTSRGIQLLTDEPEEDEGLPLIGRVAAGEPILAQQHIETHYQ
IDGSLFHPRADFLLRVHGMSMKNIGILDGDLLAVHKTTQANNGQVVVARVGDDEVTVK
RFERKGHIVQLLPENEELQPIVVDLTQENLSIEGLAVGVIRNGNWL"
misc_feature 155018..155617
/locus_tag="Tola_0146"
/note="LexA repressor; Validated; Region: PRK00215"
/db_xref="CDD:178931"
misc_feature 155018..155203
/locus_tag="Tola_0146"
/note="LexA DNA binding domain; Region: LexA_DNA_bind;
pfam01726"
/db_xref="CDD:201938"
misc_feature 155348..155608
/locus_tag="Tola_0146"
/note="Peptidase S24 LexA-like proteins are involved in
the SOS response leading to the repair of single-stranded
DNA within the bacterial cell. This family includes: the
lambda repressor CI/C2 family and related bacterial
prophage repressor proteins; LexA (EC...; Region:
S24_LexA-like; cd06529"
/db_xref="CDD:119397"
misc_feature order(155372..155374,155486..155488)
/locus_tag="Tola_0146"
/note="Catalytic site [active]"
/db_xref="CDD:119397"
gene complement(155678..156142)
/locus_tag="Tola_0147"
/db_xref="GeneID:7886135"
CDS complement(155678..156142)
/locus_tag="Tola_0147"
/inference="protein motif:TFAM:TIGR00185"
/note="TIGRFAM: RNA methyltransferase, TrmH family, group
2;
PFAM: tRNA/rRNA methyltransferase (SpoU);
KEGG: aha:AHA_0188 RNA methyltransferase"
/codon_start=1
/transl_table=11
/product="TrmH family RNA methyltransferase"
/protein_id="YP_002891363.1"
/db_xref="GI:237806923"
/db_xref="InterPro:IPR001537"
/db_xref="InterPro:IPR004440"
/db_xref="GeneID:7886135"
/translation="MLHIALYEPEIPPNTGNIIRLCANTGYFLHLIEPMGFAWDDKRL
RRAGLDYHEFAEIKRHANFENFLSTIGNARIFACTTKGKAYPSEAGFIAGDVLLFGPE
TRGLPMSIIESLPEAQRLRIPMLPQSRSMNLSNAVSVFVYESWRQLGFPGAV"
misc_feature complement(155681..156142)
/locus_tag="Tola_0147"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
cl00362"
/db_xref="CDD:212202"
gene 156358..156813
/locus_tag="Tola_0148"
/db_xref="GeneID:7886136"
CDS 156358..156813
/locus_tag="Tola_0148"
/inference="protein motif:TFAM:TIGR00738"
/note="TIGRFAM: transcriptional regulator, Rrf2 family;
PFAM: protein of unknown function UPF0074;
KEGG: asa:ASA_4148 rrf2 family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="AsnC family transcriptional regulator"
/protein_id="YP_002891364.1"
/db_xref="GI:237806924"
/db_xref="InterPro:IPR000944"
/db_xref="GeneID:7886136"
/translation="MQLTLFTDYALRTLVFLALQPDQQLSTITEVADRFSISRNHVVK
IVHQLGMKGYIDTIRGKHGGIRLARSARDINLGNLIADMENVSCLLDCQREGCRLAPG
CRFQAIMRKAMRAFMGVLSEFTLADLVRDEEQMCGLLGLEIPVTTVRTE"
misc_feature 156358..156774
/locus_tag="Tola_0148"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
misc_feature 156358..156747
/locus_tag="Tola_0148"
/note="Rrf2 family protein; Region: rrf2_super; TIGR00738"
/db_xref="CDD:129821"
misc_feature order(156433..156435,156439..156444,156466..156480,
156484..156489,156496..156498,156526..156531,
156535..156540)
/locus_tag="Tola_0148"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
gene complement(156874..158316)
/locus_tag="Tola_0149"
/db_xref="GeneID:7886137"
CDS complement(156874..158316)
/locus_tag="Tola_0149"
/inference="protein motif:TFAM:TIGR00933"
/note="TIGRFAM: potassium uptake protein, TrkH family;
PFAM: cation transporter;
KEGG: aha:AHA_0254 TrkH"
/codon_start=1
/transl_table=11
/product="TrkH family potassium uptake protein"
/protein_id="YP_002891365.1"
/db_xref="GI:237806925"
/db_xref="InterPro:IPR003445"
/db_xref="InterPro:IPR004772"
/db_xref="GeneID:7886137"
/translation="MINFKSITFVIGLTLSKLALFMWLPLLMAFFSGTAGTAEFLAAA
VLTHIVSLLFIRLGYQQAFRLSVRDMFVMTSLIWLVSCAFATLPFIFLSKLSFTDAYF
EAMSGLTTTGSTVMQGLDKMPPAILLWRSLLQWLGGIGFIVLAVAVLPYLNVGGMKLF
QMESSDRSEKDSPRMSNVARNILIVYLMLSLICCLGYWFSGMSLFDAINHAMTTLSTG
GFSTRDASMSAFSPQAQWIASGFMFLGGLPFILYVQSLRRREGLIFRDAQVRGFFWLV
ITASLIMSIWLWHSDVFSFEDALRITTFNVISVLTTTGYGLTDFGTWSYMTSVLFVFL
MLFGACSGSTAGGLKLFRIQIAGALFQKQARQLMHPAGVFPQKYNGRPVNDAIVRSIV
AFVLGYLTVIIVSAILLGMLNLPPLEAISGAITAVGNVGPGFGSTIGPLGNFTSLPDA
AKWILSAGMMMGRLEILTVAVLLFPSFWKD"
misc_feature complement(156877..158313)
/locus_tag="Tola_0149"
/note="Cation transport protein; Region: TrkH; cl10514"
/db_xref="CDD:209160"
misc_feature complement(156877..158310)
/locus_tag="Tola_0149"
/note="Trk-type K+ transport systems, membrane components
[Inorganic ion transport and metabolism]; Region: TrkG;
COG0168"
/db_xref="CDD:30517"
gene complement(158322..159698)
/locus_tag="Tola_0150"
/db_xref="GeneID:7886138"
CDS complement(158322..159698)
/locus_tag="Tola_0150"
/inference="protein motif:PFAM:PF02254"
/note="PFAM: TrkA-N domain protein; TrkA-C domain protein;
KEGG: aha:AHA_0255 potassium transporter peripheral
membrane component"
/codon_start=1
/transl_table=11
/product="TrkA-N domain-containing protein"
/protein_id="YP_002891366.1"
/db_xref="GI:237806926"
/db_xref="InterPro:IPR003148"
/db_xref="InterPro:IPR006036"
/db_xref="InterPro:IPR006037"
/db_xref="GeneID:7886138"
/translation="MKIIIVGAGQVGGTLAENLVGENNEITLVDTDAVRLRELQDKYD
LRVICGPGSYPSVLREAGADDADMLVAVTSSDECNMVACQIAYSLFNVPNKVARIRSH
AYLSARETLFKGEVFHIDHLISPEQLVIEYMRRLIEYPGALQVADFAGGRLGLVAVKA
YYGGPLVGNALATLKEHMPNIDTRVAAIFRQGRSIRPQGTTIIEADDEVFFVAASGHI
RAVMSELQRLESPYRRIMIVGGGNVGAGLARQLEGRYSVKLIERNAERAEVLSEMLEE
TIVFCGDSADQELLLEEHIEQIDVFIAVTNDDEANIMSAMLAKKLGARKAIVLIQRSA
YVDLVQGGTIDIAVSPQQATISALLTHVRRADIANVYSLRRGVAEAIEAIAHGDEHTS
KVVGRSIGELKLPPGATIGAIVRGDDVLIAHDSTVIQQDDHVVMFLVDKKHIPEVERL
FQPSPFFL"
misc_feature complement(158331..159698)
/locus_tag="Tola_0150"
/note="potassium transporter peripheral membrane
component; Reviewed; Region: trkA; PRK09496"
/db_xref="CDD:181909"
misc_feature complement(159324..159692)
/locus_tag="Tola_0150"
/note="TrkA-N domain; Region: TrkA_N; pfam02254"
/db_xref="CDD:202177"
misc_feature complement(159021..159236)
/locus_tag="Tola_0150"
/note="TrkA-C domain; Region: TrkA_C; pfam02080"
/db_xref="CDD:202105"
misc_feature complement(158649..158996)
/locus_tag="Tola_0150"
/note="TrkA-N domain; Region: TrkA_N; pfam02254"
/db_xref="CDD:202177"
misc_feature complement(158343..158525)
/locus_tag="Tola_0150"
/note="TrkA-C domain; Region: TrkA_C; pfam02080"
/db_xref="CDD:202105"
gene complement(159695..160996)
/locus_tag="Tola_0151"
/db_xref="GeneID:7886139"
CDS complement(159695..160996)
/locus_tag="Tola_0151"
/inference="protein motif:TFAM:TIGR00563"
/note="TIGRFAM: sun protein;
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44;
KEGG: asa:ASA_4142 ribosomal RNA small subunit
methyltransferase B"
/codon_start=1
/transl_table=11
/product="sun protein"
/protein_id="YP_002891367.1"
/db_xref="GI:237806927"
/db_xref="InterPro:IPR001678"
/db_xref="InterPro:IPR004573"
/db_xref="InterPro:IPR006027"
/db_xref="GeneID:7886139"
/translation="MKIRATAAKVIFQVVEQGQSLSSALPVAQQLIAAKDRALLQEIC
YGTLRWLNRLEFIADQLLDRQLKGKHRSLHYLILAGLYQLFYTRIPPHAVLAETVNAS
GLLNGDSFRKLINGVLRNAQRQQEELLQAADKNEPTRFSYPRWLLKKIKQSCQYGYVS
VLQAGNEYPPMWLRVNLSKQSRDEYQRQLAAVEIQSTPHASCESALLLEKACDVSKLP
GFADGACSVQDAAAQHAAWLLDPQPNELILDACAAPGGKTAHILERQPALKQLVAVDS
DANRLSRVAENLQRIQLEATLINGDASHPEQWWQGPQFDRILLDAPCSATGVIRRHPD
IKWLRRPEDIAELAHLQHDILNAMWQQLKPGGTLLYATCSILSDENSSQIKSFLERTA
DAIHVPLNEKDTALQPGWQIHPGEQHMDGFFYAKLTKQVTV"
misc_feature complement(159707..160996)
/locus_tag="Tola_0151"
/note="16S rRNA methyltransferase B; Provisional; Region:
PRK10901"
/db_xref="CDD:182822"
misc_feature complement(160646..160996)
/locus_tag="Tola_0151"
/note="RNA binding domain of NusB (N protein-Utilization
Substance B) and Sun (also known as RrmB or Fmu) proteins.
This family includes two orthologous groups exemplified by
the transcription termination factor NusB and the
N-terminal domain of the...; Region: NusB_Sun; cl00223"
/db_xref="CDD:212179"
misc_feature complement(160985..160993)
/locus_tag="Tola_0151"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:29564"
misc_feature complement(159887..160258)
/locus_tag="Tola_0151"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(160037..160039,160091..160099,
160169..160174,160229..160249))
/locus_tag="Tola_0151"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(161018..161962)
/locus_tag="Tola_0152"
/db_xref="GeneID:7886140"
CDS complement(161018..161962)
/locus_tag="Tola_0152"
/inference="protein motif:TFAM:TIGR00460"
/note="TIGRFAM: methionyl-tRNA formyltransferase;
PFAM: formyl transferase domain protein;
KEGG: vha:VIBHAR_00392 methionyl-tRNA formyltransferase"
/codon_start=1
/transl_table=11
/product="methionyl-tRNA formyltransferase"
/protein_id="YP_002891368.1"
/db_xref="GI:237806928"
/db_xref="InterPro:IPR001555"
/db_xref="InterPro:IPR002376"
/db_xref="InterPro:IPR005793"
/db_xref="InterPro:IPR005794"
/db_xref="GeneID:7886140"
/translation="MHNLRIVFAGTPDFAAKHLQALLNANLQVVAVYTQPDRPAGRGN
KLTPSPVKILAVEHNIPVFQPENFKSAEAQQELAALKPDLMVVVAYGLLLPQQVLDTP
RLGCINVHGSLLPGWRGAAPIQRAIWAGDPETGITIMQMDAGLDTGDMLHKMVCPITP
EDTSASLYEKLAIDGPEGMLFTIQQIADGTAKPEKQNNELATYAKKLSKEEACINWQQ
DAAFIERCIRAFNPWPVSYFKLADLNIKVWKAEVLPNTAQQSPGMIIQASKAGLDIAT
GNGMLRIKQLQLPGKKAMSFADVLNARQDLFLQGNILP"
misc_feature complement(161024..161953)
/locus_tag="Tola_0152"
/note="methionyl-tRNA formyltransferase; Reviewed; Region:
fmt; PRK00005"
/db_xref="CDD:178787"
misc_feature complement(161342..161953)
/locus_tag="Tola_0152"
/note="Methionyl-tRNA formyltransferase, N-terminal
hydrolase domain; Region: FMT_core_Met-tRNA-FMT_N;
cd08646"
/db_xref="CDD:187715"
misc_feature complement(order(161525..161530,161537..161542,
161546..161548,161606..161608,161630..161641,
161666..161668,161681..161704,161918..161923,
161933..161935))
/locus_tag="Tola_0152"
/note="putative active site [active]"
/db_xref="CDD:187715"
misc_feature complement(order(161345..161347,161600..161608,
161630..161635,161639..161641,161690..161701,
161831..161842,161846..161848,161858..161860,
161921..161923,161927..161932))
/locus_tag="Tola_0152"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187715"
misc_feature complement(order(161525..161530,161537..161542,
161639..161641,161666..161668,161681..161689,
161693..161695,161702..161704))
/locus_tag="Tola_0152"
/note="putative cosubstrate binding site; other site"
/db_xref="CDD:187715"
misc_feature complement(order(161525..161527,161633..161635,
161639..161641))
/locus_tag="Tola_0152"
/note="catalytic site [active]"
/db_xref="CDD:187715"
misc_feature complement(161078..161335)
/locus_tag="Tola_0152"
/note="C-terminal domain of Formyltransferase and other
enzymes; Region: Met_tRNA_FMT_C; cd08704"
/db_xref="CDD:187732"
misc_feature complement(order(161081..161083,161087..161092,
161096..161098,161102..161104,161225..161227,
161231..161233,161264..161266))
/locus_tag="Tola_0152"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187732"
gene complement(161980..162483)
/gene="def"
/locus_tag="Tola_0153"
/db_xref="GeneID:7886141"
CDS complement(161980..162483)
/gene="def"
/locus_tag="Tola_0153"
/EC_number="3.5.1.88"
/inference="protein motif:TFAM:TIGR00079"
/note="cleaves off formyl group from N-terminal methionine
residues of newly synthesized proteins; binds iron(2+)"
/codon_start=1
/transl_table=11
/product="peptide deformylase"
/protein_id="YP_002891369.1"
/db_xref="GI:237806929"
/db_xref="InterPro:IPR000181"
/db_xref="GeneID:7886141"
/translation="MATLDVLRFPDERLRKIATPIEKITSDLEHIIEDMFETMYLEEG
IGLAATQVNIHKRLVVVDTSENRDQPMVFINPELIEKRGETGIEEGCLSVPECRAFVP
RAEWIKVRALDRHGEPFEIEADGLLAICLQHEMDHLVGKLFVDYLSPLKRQRIRQKLE
KLARNER"
misc_feature complement(162055..162468)
/gene="def"
/locus_tag="Tola_0153"
/note="Polypeptide or peptide deformylase; a family of
metalloenzymes that catalyzes the removal of the
N-terminal formyl group in a growing polypeptide chain
following translation initiation during protein synthesis
in prokaryotes. These enzymes utilize Fe(II)...; Region:
Pep_deformylase; cd00487"
/db_xref="CDD:29602"
misc_feature complement(order(162073..162075,162082..162087,
162208..162216,162331..162333,162346..162354))
/gene="def"
/locus_tag="Tola_0153"
/note="active site"
/db_xref="CDD:29602"
misc_feature complement(order(162082..162084,162208..162210,
162331..162333,162346..162348))
/gene="def"
/locus_tag="Tola_0153"
/note="catalytic residues [active]"
/db_xref="CDD:29602"
misc_feature complement(order(162073..162075,162085..162087,
162211..162213))
/gene="def"
/locus_tag="Tola_0153"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:29602"
gene 162578..163678
/locus_tag="Tola_0154"
/db_xref="GeneID:7886142"
CDS 162578..163678
/locus_tag="Tola_0154"
/inference="protein motif:PFAM:PF01476"
/note="PFAM: Peptidoglycan-binding LysM;
SMART: Peptidoglycan-binding LysM;
KEGG: asa:ASA_4139 LysM domain-containing protein"
/codon_start=1
/transl_table=11
/product="Peptidoglycan-binding LysM"
/protein_id="YP_002891370.1"
/db_xref="GI:237806930"
/db_xref="InterPro:IPR002482"
/db_xref="GeneID:7886142"
/translation="MIMKPRYISIFLMSALFAFQVSADTLALKKDHPDRYVVQKGDTL
WDISGRFLTKPWLWPRLWDMNKQIKNPHWIYPGDRLRLTWVNGQPKLVLDSSDARSGK
KVITLTPKMRIEEKQGPVSTVEYSDISQFLRADMVADSNVDLEHMPYVLGENDDTSIF
MSQGQTLHVRGKPDLNTNYGVYRIGNVYKDEQTGEELGRQLELVGVVQPKELYDTDIT
SVEVLSSFSEIRRGDRLLPMLSESSIDAFFVPQAGNLSKPAHVIDIPMKSTYVGRYDT
VIIDKGARENLKPGDVFGIVRPGAEVVDNGPDNVIYEQDGTAGEKLQKKTTLRADHIG
EVMIVKVYQKTSLAIVMNSRAIVRAGYAVENP"
misc_feature <162665..162823
/locus_tag="Tola_0154"
/note="Uncharacterized protein containing LysM domain
[Function unknown]; Region: XkdP; COG1652"
/db_xref="CDD:31838"
misc_feature 162683..162823
/locus_tag="Tola_0154"
/note="Lysine Motif is a small domain involved in binding
peptidoglycan; Region: LysM; cd00118"
/db_xref="CDD:212030"
gene 163659..164783
/locus_tag="Tola_0155"
/db_xref="GeneID:7886143"
CDS 163659..164783
/locus_tag="Tola_0155"
/inference="protein motif:TFAM:TIGR00732"
/note="TIGRFAM: DNA protecting protein DprA;
PFAM: SMF family protein;
KEGG: aha:AHA_0260 DNA protecting protein DprA"
/codon_start=1
/transl_table=11
/product="DNA protecting protein DprA"
/protein_id="YP_002891371.1"
/db_xref="GI:237806931"
/db_xref="InterPro:IPR003488"
/db_xref="GeneID:7886143"
/translation="MRWKIPEQSLSQNELALWLHLTNIPGIGPVKGAKLLQQFPITAL
SQSQLSDCGWNQQQIERWFDFSPETYKPIIDWADETSRYILHFDHPSYPALLRNVVGA
PLVLFVAGDLAVLNQQQLAVVGSRRPTQDGRDAAQSFTSELVRQGFAITSGLASGIDA
VSHQTALQQGGRTIAVQGCGLRHVYPAKHKRLASQILEQGGALISEFFPETLPRAEYF
PRRNRIISGLTVGTLVIEAAEKSGSLITARCALEQNREVFAVPGRSNNLNARGCHRLI
QQGAKLVCDVADIIEEIGIFPRMVEHYGETGPIAEEPLSDLPFYRLLDNVRSDEVTSI
DVIAATSRLPVQEVMTELITLELEGLILSVPGGYVRTRSA"
misc_feature 163707..164780
/locus_tag="Tola_0155"
/note="hypothetical protein; Provisional; Region:
PRK10736"
/db_xref="CDD:182686"
misc_feature 163878..164534
/locus_tag="Tola_0155"
/note="DNA protecting protein DprA; Region: dprA;
TIGR00732"
/db_xref="CDD:129815"
gene 164786..165259
/locus_tag="Tola_0156"
/db_xref="GeneID:7886144"
CDS 164786..165259
/locus_tag="Tola_0156"
/inference="protein motif:PFAM:PF04361"
/note="PFAM: protein of unknown function DUF494;
KEGG: aha:AHA_0261 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891372.1"
/db_xref="GI:237806932"
/db_xref="InterPro:IPR007456"
/db_xref="GeneID:7886144"
/translation="MFDVLMYLFETYVQSELDFMVDQDALTDELTRAGFQKPEIYKAL
SWLEQLAALHDSEDAPEYTACASDSFRIYASEEMLKLSTECRGFLLFLEQIRVLNCDT
REIVIERLMELDSPEIELDDLKWVVMMVLFNLPGGENACHQMEELMFEPEAITIQ"
misc_feature 164786..165241
/locus_tag="Tola_0156"
/note="Protein of unknown function (DUF494); Region:
DUF494; cl01103"
/db_xref="CDD:186336"
gene 165282..165854
/locus_tag="Tola_0157"
/db_xref="GeneID:7886145"
CDS 165282..165854
/locus_tag="Tola_0157"
/inference="protein motif:PFAM:PF01396"
/note="PFAM: DNA topoisomerase type IA zn finger domain
protein;
KEGG: swd:Swoo_0043 DNA topoisomerase type IA Zn finger
domain-containing protein"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase type IA zn finger
domain-containing protein"
/protein_id="YP_002891373.1"
/db_xref="GI:237806933"
/db_xref="InterPro:IPR013498"
/db_xref="GeneID:7886145"
/translation="MSKIDTTLFTAQEHALDKEYRLCPECGGALSLRRSKHGLFLGCE
NYPDCQFMRPLQQQNVLIEKILEDSSCPECGKLLAIKKGRFGLFIGCTGYPECSHIET
NNTTLADTSLLPDCPVCQQGQLQAKTSRYGKTFYACSNYPKCKYAINDKPIAKACPQC
GFSLLVEKRTRQGIRFCCPQKDCNYSAESL"
misc_feature 165342..165455
/locus_tag="Tola_0157"
/note="Topoisomerase DNA binding C4 zinc finger; Region:
zf-C4_Topoisom; pfam01396"
/db_xref="CDD:110400"
misc_feature 165456..165851
/locus_tag="Tola_0157"
/note="Zn-finger domain associated with topoisomerase type
I [DNA replication, recombination, and repair]; Region:
TopA; COG0551"
/db_xref="CDD:30897"
misc_feature 165492..165584
/locus_tag="Tola_0157"
/note="Topoisomerase DNA binding C4 zinc finger; Region:
zf-C4_Topoisom; pfam01396"
/db_xref="CDD:110400"
misc_feature 165624..165740
/locus_tag="Tola_0157"
/note="Topoisomerase DNA binding C4 zinc finger; Region:
zf-C4_Topoisom; pfam01396"
/db_xref="CDD:110400"
gene 165901..166404
/locus_tag="Tola_0158"
/db_xref="GeneID:7886146"
CDS 165901..166404
/locus_tag="Tola_0158"
/EC_number="4.1.1.21"
/inference="protein motif:TFAM:TIGR01162"
/note="KEGG: asa:ASA_4135 phosphoribosylaminoimidazole
carboxylase, catalytic subunit;
TIGRFAM: phosphoribosylaminoimidazole carboxylase,
catalytic subunit;
PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate
(AIR) carboxylase"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole carboxylase
catalytic subunit"
/protein_id="YP_002891374.1"
/db_xref="GI:237806934"
/db_xref="InterPro:IPR000031"
/db_xref="GeneID:7886146"
/translation="MSNPFVAILMGSDSDFPVMQSTLEVLKSFDIRYEVKVTSAHRTP
AATHAYVTDAEARGCKVFICAAGLAAHLAGAVAGITTRTVIGVPIDGGPLKGMDALLS
TVQMPGGVPVATVAIGKAGAKNAGYLAAQILAVADDALAAKVKAERQKNAEEVMAKDA
ALQAQLK"
misc_feature 165910..166365
/locus_tag="Tola_0158"
/note="AIR carboxylase; Region: AIRC; pfam00731"
/db_xref="CDD:144362"
gene 166442..167002
/locus_tag="Tola_0159"
/db_xref="GeneID:7886147"
CDS 166442..167002
/locus_tag="Tola_0159"
/inference="protein motif:TFAM:TIGR00057"
/note="TIGRFAM: Sua5/YciO/YrdC/YwlC family protein;
PFAM: SUA5/yciO/yrdC domain;
KEGG: aha:AHA_0264 SUA5/YciO/YrdC family protein"
/codon_start=1
/transl_table=11
/product="Sua5/YciO/YrdC/YwlC family protein"
/protein_id="YP_002891375.1"
/db_xref="GI:237806935"
/db_xref="InterPro:IPR004388"
/db_xref="InterPro:IPR006070"
/db_xref="GeneID:7886147"
/translation="MTENLQQACQILRSGGVIAYATEAVFGLGCDPDNETAVHKLLQI
KQRPIEKGLILIAASWEQLAPYLDVSLLTEEQLQRAQKSWPGPYTWVFPAKISTPKWL
TGQFSSLAVRISAHPQVQALCLMYGKPMVSTSANLTSLPPCRTVEDVRSQLTGRIDYI
LPGDVGKQTNPSEIRDVITNQLIRAG"
misc_feature 166445..166999
/locus_tag="Tola_0159"
/note="Telomere recombination; Region: Sua5_yciO_yrdC;
cl00305"
/db_xref="CDD:206970"
gene 167047..167868
/gene="aroE"
/locus_tag="Tola_0160"
/db_xref="GeneID:7886148"
CDS 167047..167868
/gene="aroE"
/locus_tag="Tola_0160"
/inference="protein motif:TFAM:TIGR00507"
/note="AroE; catalyzes the conversion of shikimate to
3-dehydroshikimate"
/codon_start=1
/transl_table=11
/product="shikimate 5-dehydrogenase"
/protein_id="YP_002891376.1"
/db_xref="GI:237806936"
/db_xref="InterPro:IPR006151"
/db_xref="InterPro:IPR011342"
/db_xref="InterPro:IPR013708"
/db_xref="GeneID:7886148"
/translation="MDRYAVFGNPINHSKSPFIHTLFARQTQQLLTYEKIEAPVDDFV
GSIRRFFAEGGKGANVTVPFKEQAFQLVDQLSPRAKLAGAVNTLKLTDDGLLLGDNTD
GAGLVQDLKYHLEELAGKKILLLGAGGACRGVIGPLLEQRPSEIVIANRTVAKAEQLA
QEFAAMGKVRVSQFAELNESFDLIINGTSASLAGAMPDIPDAVIGSATVTYDMMYGSK
ETVFNLWAKEHGAIKTIDGLGMLVCQAAESFAVWRGIRPGTRQVIRELRRNITGA"
misc_feature 167047..167862
/gene="aroE"
/locus_tag="Tola_0160"
/note="shikimate 5-dehydrogenase; Reviewed; Region: aroE;
PRK00258"
/db_xref="CDD:178949"
misc_feature 167062..167304
/gene="aroE"
/locus_tag="Tola_0160"
/note="Shikimate dehydrogenase substrate binding domain;
Region: Shikimate_dh_N; pfam08501"
/db_xref="CDD:149523"
misc_feature 167437..167808
/gene="aroE"
/locus_tag="Tola_0160"
/note="NAD(P) binding domain of Shikimate dehydrogenase;
Region: NAD_bind_Shikimate_DH; cd01065"
/db_xref="CDD:133443"
misc_feature order(167494..167499,167605..167613,167683..167685,
167755..167757,167764..167769)
/gene="aroE"
/locus_tag="Tola_0160"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:133443"
misc_feature order(167689..167691,167767..167769,167776..167778)
/gene="aroE"
/locus_tag="Tola_0160"
/note="shikimate binding site; other site"
/db_xref="CDD:133443"
gene complement(167872..168414)
/locus_tag="Tola_0161"
/db_xref="GeneID:7886149"
CDS complement(167872..168414)
/locus_tag="Tola_0161"
/inference="similar to AA sequence:KEGG:VV3213"
/note="KEGG: vvy:VV3213 carbonic anhydrase"
/codon_start=1
/transl_table=11
/product="carbonic anhydrase"
/protein_id="YP_002891377.1"
/db_xref="GI:237806937"
/db_xref="InterPro:IPR001451"
/db_xref="GeneID:7886149"
/translation="MSSIRSYRGIKPQLGHAVYIDPQSCVIGDVRLSDDSSVWPMAVV
RGDVNYITIGARSNVQDGSVLHVNRVTEKNPDGCPLIIGNDVTIGHKAVLHGCIIHDR
VLVGMGAVILDGAIIESDVIVAAGAVVPPRKRLVSGYVYVGNPVKQGRALTEDEQEFF
VQSSANYVLLKNEFLSELNN"
misc_feature complement(167878..168414)
/locus_tag="Tola_0161"
/note="Carbonic anhydrases/acetyltransferases, isoleucine
patch superfamily [General function prediction only];
Region: PaaY; COG0663"
/db_xref="CDD:31007"
misc_feature complement(167899..168378)
/locus_tag="Tola_0161"
/note="Gamma carbonic anhydrase-like: This family is
composed of gamma carbonic anhydrase (CA), Ferripyochelin
Binding Protein (FBP), E. coli paaY protein, and similar
proteins. CAs are zinc-containing enzymes that catalyze
the reversible hydration of carbon...; Region:
LbH_gamma_CA_like; cd04645"
/db_xref="CDD:100051"
misc_feature complement(order(168094..168096,168130..168132,
168136..168147,168217..168219,168229..168234,
168274..168276,168280..168282,168286..168291,
168298..168300,168334..168336,168343..168348,
168352..168354,168358..168360))
/locus_tag="Tola_0161"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:100051"
misc_feature complement(order(168130..168132,168145..168147,
168217..168219))
/locus_tag="Tola_0161"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:100051"
gene 168795..170328
/locus_tag="Tola_R0007"
/db_xref="GeneID:7886150"
rRNA 168795..170328
/locus_tag="Tola_R0007"
/product="16S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7886150"
gene 170398..170474
/locus_tag="Tola_R0008"
/note="tRNA-Ile2"
/db_xref="GeneID:7886151"
tRNA 170398..170474
/locus_tag="Tola_R0008"
/product="tRNA-Ile"
/db_xref="GeneID:7886151"
gene 170486..170561
/locus_tag="Tola_R0009"
/note="tRNA-Ala2"
/db_xref="GeneID:7886152"
tRNA 170486..170561
/locus_tag="Tola_R0009"
/product="tRNA-Ala"
/db_xref="GeneID:7886152"
gene 170768..173654
/locus_tag="Tola_R0010"
/db_xref="GeneID:7886153"
rRNA 170768..173654
/locus_tag="Tola_R0010"
/product="23S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7886153"
gene 173783..173896
/locus_tag="Tola_R0011"
/db_xref="GeneID:7886154"
rRNA 173783..173896
/locus_tag="Tola_R0011"
/product="5S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7886154"
gene 173959..174035
/locus_tag="Tola_R0012"
/note="tRNA-Asp2"
/db_xref="GeneID:7886155"
tRNA 173959..174035
/locus_tag="Tola_R0012"
/product="tRNA-Asp"
/db_xref="GeneID:7886155"
gene 174093..174206
/locus_tag="Tola_R0013"
/db_xref="GeneID:7886156"
rRNA 174093..174206
/locus_tag="Tola_R0013"
/product="5S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7886156"
gene complement(174255..176429)
/locus_tag="Tola_0162"
/db_xref="GeneID:7886157"
CDS complement(174255..176429)
/locus_tag="Tola_0162"
/inference="protein motif:PFAM:PF03781"
/note="PFAM: protein of unknown function DUF323;
Methyltransferase type 11; Methyltransferase type 12;
KEGG: aha:AHA_0211 generic methyltransferase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891378.1"
/db_xref="GI:237806938"
/db_xref="InterPro:IPR005532"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:7886157"
/translation="MDTPNQFSLSDTQIASASALPAPTHTLWLHGTDVAAKRQELLNY
FIQTYDLYDSLFDCLACDDAWYKKAIPLRHPLIFYYGHTAAFFINKLLAGQFIQQRID
ADIEATVAIGVDEMSWDDLDEKHYRWPTIQRLREYRQQVRSRVIQFIQDMPLELPITW
ENPAWAILMGIEHERIHLETSSVLIRQLPLERVQPQPRWQYCPTQRNNIADVPQNALI
TVAGTTIQLGKPESDTTYGWDNEYGQRSITLESFQASKYLVSNAEYLEFIQDGGYQQP
QWWSEEGLGWLNFTKADKPTFWCGDPTQTTSLRLRLMCEEIPMPWDWPVETNQLESAA
FCRWKAAKTGLPIQLPSEAEWMALRENITADQPDWIKAPGNINLEYWSSSCPIDQFLH
GKFYDVIGNVWQWTSTAIDGFNGFRVHPLYDDFSTPTFDGKHNLIKGGSWISTGNLAI
KNARYAFRRHFFQHAGFRYVVSRYQEPMLVNPYETDPLIAQYLDSHYGAERFGVPNHC
KTLAEIANQFCQNKIRALDIGCSVGRASFELAKYFQHVDAVDYSARFIDIAQILAQQN
SFRYAMTNEGELVDYREAKLTDCQLSPELANHIHFTQGDACNLKNKYRHYDLILAANM
LDRLREPARFLKDLAHRLRDDGILMICSPHTWQEDSTVKSYWLGGIRENGEALTTYQA
LQRILSKEFEEITKPQDIPFVLQETARKYQYLLSQLTVWRKK"
misc_feature complement(175026..176270)
/locus_tag="Tola_0162"
/note="TIGR03440 family protein; Region: unchr_TIGR03440"
/db_xref="CDD:163266"
misc_feature complement(175020..175784)
/locus_tag="Tola_0162"
/note="Formylglycine-generating sulfatase enzyme; Region:
FGE-sulfatase; cl15394"
/db_xref="CDD:199530"
misc_feature complement(<174456..174866)
/locus_tag="Tola_0162"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:206018"
misc_feature complement(174477..174860)
/locus_tag="Tola_0162"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(174564..174566,174612..174620,
174777..174782,174828..174848))
/locus_tag="Tola_0162"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(176513..176920)
/locus_tag="Tola_0163"
/db_xref="GeneID:7886158"
CDS complement(176513..176920)
/locus_tag="Tola_0163"
/inference="protein motif:TFAM:TIGR01354"
/note="TIGRFAM: cytidine deaminase;
PFAM: CMP/dCMP deaminase zinc-binding;
KEGG: pcd1; cytidine deaminase Pcd1; K01489 cytidine
deaminase"
/codon_start=1
/transl_table=11
/product="cytidine deaminase"
/protein_id="YP_002891379.1"
/db_xref="GI:237806939"
/db_xref="InterPro:IPR002125"
/db_xref="InterPro:IPR006262"
/db_xref="InterPro:IPR016192"
/db_xref="GeneID:7886158"
/translation="MPQIDDTQLMQLMDAAKASIRHAYMPYSNYPVGAAVLTADNRII
AGVNIENAAYPAGMCAERVALGNAISQGYTQFKAIAVFSPKGEISPCGVCRQFISEFG
PDIQILFHWQGQLQQMPIKDLLPFSFSQTQLNA"
misc_feature complement(176567..176884)
/locus_tag="Tola_0163"
/note="Cytidine deaminase zinc-binding domain. These
enzymes are Zn dependent. The zinc ion in the active site
plays a central role in the proposed catalytic mechanism,
activating a water molecule to form a hydroxide ion that
performs a nucleophilic attack on...; Region:
cytidine_deaminase; cd01283"
/db_xref="CDD:29826"
misc_feature complement(order(176639..176641,176648..176650,
176738..176746,176771..176773,176777..176779,
176825..176827,176831..176833))
/locus_tag="Tola_0163"
/note="active site"
/db_xref="CDD:29826"
misc_feature complement(order(176639..176641,176648..176653,
176738..176746))
/locus_tag="Tola_0163"
/note="catalytic motif [active]"
/db_xref="CDD:29826"
misc_feature complement(order(176639..176641,176648..176650,
176738..176740,176744..176746))
/locus_tag="Tola_0163"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:29826"
gene complement(177017..178681)
/locus_tag="Tola_0164"
/db_xref="GeneID:7886159"
CDS complement(177017..178681)
/locus_tag="Tola_0164"
/inference="protein motif:TFAM:TIGR02403"
/note="KEGG: asa:ASA_0485 trehalose-6-phosphate hydrolase;
TIGRFAM: alpha,alpha-phosphotrehalase;
PFAM: alpha amylase catalytic region;
SMART: alpha amylase catalytic sub domain"
/codon_start=1
/transl_table=11
/product="alpha,alpha-phosphotrehalase"
/protein_id="YP_002891380.1"
/db_xref="GI:237806940"
/db_xref="InterPro:IPR006047"
/db_xref="InterPro:IPR006589"
/db_xref="InterPro:IPR012769"
/db_xref="GeneID:7886159"
/translation="MSYPQHDWWRQAVVYQIYPKSFQDSGDKGTGDLQGIIRRLDYLQ
QLGVDALWITPIYCSPQVDNGYDIADYYAIDPAFGGMTDFEQLVAACKQRNMHIIMDM
VFNHTSTEHVWFKTALSDPQSRFRDFYIWRDPVNGKAPNNWQSKFGGNAWAFDQQSGQ
YYLHLFSEQQADLNWENPEVREEIKKVLHFWADKGVDGFRLDVINLISKQQDFCDDFT
GDGRRFYTDGPRVHEYLQELSRDVFQPRGCMTVGEMSSTTLEHCQQYSQQDGRELSMV
FNFHHLKVDYPNGEKWQLAEPDFIELKQIFAKWQNGLHQQGWSALFWCNHDQPRIVSR
FGHEGQYREKSAKMLATVLHMLQGTPYIYQGEEIGMTNPHFSRIDDYRDVESLNVYLA
HQQQKIPAEETLQILAARSRDNSRTPMPWDTSAGAGFSQATPWIQLGDNAGEVNVAKA
LADKNSVFYYYQRLIQLRKQQPVIVNGNYQDLQPDNPDLWCYQRDDGQHKLLIVANLR
ITATPFVLPEQWRQTTSECLIHNSETTPALCSRELQPYEVMVWLNK"
misc_feature complement(177026..178681)
/locus_tag="Tola_0164"
/note="trehalose-6-phosphate hydrolase; Provisional;
Region: PRK10933"
/db_xref="CDD:182849"
misc_feature complement(177272..178654)
/locus_tag="Tola_0164"
/note="Alpha amylase catalytic domain found in Sucrose
isomerases, oligo-1,6-glucosidase (also called isomaltase;
sucrase-isomaltase; alpha-limit dextrinase), dextran
glucosidase (also called glucan 1,6-alpha-glucosidase),
and related proteins; Region: AmyAc_SI_OligoGlu_DGase;
cd11333"
/db_xref="CDD:200472"
misc_feature complement(order(178586..178588,178598..178600,
178604..178606,178610..178612))
/locus_tag="Tola_0164"
/note="Ca binding site [ion binding]; other site"
/db_xref="CDD:200472"
misc_feature complement(order(177446..177448,177923..177925,
178076..178078,178172..178174,178184..178186,
178241..178243,178364..178366,178373..178375,
178484..178486,178493..178495))
/locus_tag="Tola_0164"
/note="active site"
/db_xref="CDD:200472"
misc_feature complement(order(177701..177703,177923..177925,
178076..178078))
/locus_tag="Tola_0164"
/note="catalytic site [active]"
/db_xref="CDD:200472"
misc_feature complement(177026..177304)
/locus_tag="Tola_0164"
/note="Domain of unknown function (DUF3459); Region:
DUF3459; pfam11941"
/db_xref="CDD:204789"
gene complement(178750..180186)
/locus_tag="Tola_0165"
/db_xref="GeneID:7886160"
CDS complement(178750..180186)
/locus_tag="Tola_0165"
/inference="protein motif:TFAM:TIGR01992"
/note="phosphoenolpyruvate-dependent sugar
phosphotransferase system; catalyzes the phosphorylation
of incoming sugar substrates concomitant with their
translocation across the cell membrane; IIB is
phosphorylated by IIA and then transfers the phosphoryl
group to the sugar; IIC forms the translocation channel"
/codon_start=1
/transl_table=11
/product="PTS system trehalose(maltose)-specific
transporter subunit IIBC"
/protein_id="YP_002891381.1"
/db_xref="GI:237806941"
/db_xref="InterPro:IPR001996"
/db_xref="InterPro:IPR003352"
/db_xref="InterPro:IPR011296"
/db_xref="InterPro:IPR011535"
/db_xref="InterPro:IPR013013"
/db_xref="GeneID:7886160"
/translation="MSKSFSQDVTRLISLVGGKDNIATVSHCLTRLRFVLKNTAQADI
KGIEKLASVKGCFTNAGQFQVVIGTEVDQFYKLLIAETGVDGASKEAAKVAARQNMNV
LERAISHLAEIFVPLLPAIITGGLILGFRNVIGDIKMFDGKSLTEISQFWAMVHSFLW
LVGEAIFHFLPVGVCWATVRKMGGSEILGIVLGITLVSPQLMNAYLIGQQAPEAWDFG
LFAIQKVGYQAQVIPAILAGALLALIETRLKQIIPAYLYLVIVPFVSLLLAVILAHSL
IGPFGRWIGDGVAFAAKAVMTGGFAPIGAALFGFLYAPLVITGVHHTTNAVDLQLVQS
MGGTPIWPLIALSNIAQASAVLGIILISRKENEREISVPAAISAYLGVTEPAMYGINL
RYKFPMLCAMVGSALAALVCGFSGVLANGIGVGGLPGILSIQPQFWGIYAVAMLIAIA
VPLTLTMAVYKHKFRNQTQAELSATEVA"
misc_feature complement(178777..180186)
/locus_tag="Tola_0165"
/note="PTS system trehalose(maltose)-specific transporter
subunits IIBC; Provisional; Region: PRK11007"
/db_xref="CDD:182896"
misc_feature complement(179938..180171)
/locus_tag="Tola_0165"
/note="PTS_IIB, PTS system, glucose/sucrose specific IIB
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIB_glc; cd00212"
/db_xref="CDD:29267"
misc_feature complement(180088..180108)
/locus_tag="Tola_0165"
/note="active site turn [active]"
/db_xref="CDD:29267"
misc_feature complement(180103..180105)
/locus_tag="Tola_0165"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29267"
misc_feature complement(178753..179901)
/locus_tag="Tola_0165"
/note="Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
transport and metabolism]; Region: PtsG; COG1263"
/db_xref="CDD:31455"
gene complement(180388..181335)
/gene="treR"
/locus_tag="Tola_0166"
/db_xref="GeneID:7886161"
CDS complement(180388..181335)
/gene="treR"
/locus_tag="Tola_0166"
/inference="protein motif:TFAM:TIGR02405"
/note="regulates genes involved in trehalose metabolism;
binds the intermediate trehalose-6-phosphate; binds a
dimer; regulates treBC operon"
/codon_start=1
/transl_table=11
/product="trehalose repressor"
/protein_id="YP_002891382.1"
/db_xref="GI:237806942"
/db_xref="InterPro:IPR000843"
/db_xref="InterPro:IPR001761"
/db_xref="InterPro:IPR012771"
/db_xref="GeneID:7886161"
/translation="MTKRLTILDIARLSGVGKSTVSRVLNQDPNVNPQTRDRVEAVIR
EHGFEPSKSARAMRTNSARLVGIIVSRLDSASENRAVRGMLEVLYARGYDAMLMESEF
DPAKVDEHLALLARRGVDGVILFAFSALDLERLRSWQDNLILMARAWPDMSSVCYDDE
GAIQQILEKLYAAGRHQIDFIGVDQSDATTGALRLQAYQQFCTAHQLPCRYLTGSLDV
QSGYDLTARLLTPATDAVVCATDTLAMGAAKYLQEQQRHDIQLTGVGNNPLLHFLFPQ
VLSVDPGYKQAGRLAAEQLLLQLEQQAEPCAQIAPSHDL"
misc_feature complement(180391..181335)
/gene="treR"
/locus_tag="Tola_0166"
/note="trehalose repressor; Provisional; Region: treR;
PRK09492"
/db_xref="CDD:181905"
misc_feature complement(181159..181311)
/gene="treR"
/locus_tag="Tola_0166"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature complement(order(181162..181167,181171..181176,
181183..181185,181192..181194,181231..181233,
181240..181245,181258..181260,181267..181272,
181276..181290))
/gene="treR"
/locus_tag="Tola_0166"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature complement(181165..181194)
/gene="treR"
/locus_tag="Tola_0166"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature complement(180469..181146)
/gene="treR"
/locus_tag="Tola_0166"
/note="Ligand-binding domain of DNA transcription
repressor specific for trehalose (TreR) which is a member
of the LacI-GalR family of bacterial transcription
regulators; Region: PBP1_TreR_like; cd01542"
/db_xref="CDD:107255"
misc_feature complement(order(180517..180522,180589..180591,
180982..180990,181006..181008,181039..181041,
181045..181050,181054..181056,181081..181083,
181102..181104,181117..181119,181144..181146))
/gene="treR"
/locus_tag="Tola_0166"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107255"
misc_feature complement(order(180484..180486,180610..180612,
180616..180618,180754..180756,180961..180963,
181105..181110))
/gene="treR"
/locus_tag="Tola_0166"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107255"
gene 181552..182058
/locus_tag="Tola_0167"
/db_xref="GeneID:7885676"
CDS 181552..182058
/locus_tag="Tola_0167"
/inference="protein motif:PFAM:PF04074"
/note="PFAM: conserved hypothetical protein;
KEGG: asa:ASA_3550 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891383.1"
/db_xref="GI:237806943"
/db_xref="InterPro:IPR004375"
/db_xref="GeneID:7885676"
/translation="MFIGNLQELDDVLLHPLIAAVLRDFVATNADVLELPKGKIDLTV
PAQFAPADMPKDPLFMIVSMDTSQLVTERRAEFHDTYLDIQLLLSGEEWIGIGPHTVE
LDRADNPHPDLYFMDEPSTTYVGLQPGDFVVIAPGELHTPLCTLTEPGQLRKIVFKVH
KALLAPSA"
misc_feature 181552..182043
/locus_tag="Tola_0167"
/note="Domain of unknown function (DUF386); Region:
DUF386; cl01047"
/db_xref="CDD:186309"
gene 182074..182736
/locus_tag="Tola_0168"
/db_xref="GeneID:7885677"
CDS 182074..182736
/locus_tag="Tola_0168"
/inference="protein motif:PFAM:PF02798"
/note="PFAM: Glutathione S-transferase domain;
KEGG: hch:HCH_06697 glutathione S-transferase"
/codon_start=1
/transl_table=11
/product="glutathione S-transferase"
/protein_id="YP_002891384.1"
/db_xref="GI:237806944"
/db_xref="InterPro:IPR004045"
/db_xref="GeneID:7885677"
/translation="MPEFQLIIGNKNYSSWSLRPWLLLRKLGVSFEETQVLLQSEDFK
TQAMQYSPAAKVPVLLDGGLAIWDSLAIAEYLAEQFPQAWPKDKAARAFARSICAEIH
SGFMTLRSKMPMNCRATGREVVGDDALQKDIERIQAIWNECRQRYGHAGPWLFGEFTI
ADAMFAPVVFRFNTYGINVQGLADEYLQTVLQDADVQAWLHAAQQEQAVIMGYEVGLT
AQ"
misc_feature 182086..182304
/locus_tag="Tola_0168"
/note="GST_N family, unknown subfamily 1; composed of
uncharacterized proteins, predominantly from bacteria,
with similarity to GSTs. GSTs are cytosolic dimeric
proteins involved in cellular detoxification by catalyzing
the conjugation of glutathione (GSH) with...; Region:
GST_N_1; cd03043"
/db_xref="CDD:48592"
misc_feature order(182119..182121,182125..182130,182134..182139,
182146..182151,182281..182283,182290..182295)
/locus_tag="Tola_0168"
/note="putative C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:48592"
misc_feature order(182119..182121,182236..182244,182275..182280)
/locus_tag="Tola_0168"
/note="putative GSH binding site (G-site) [chemical
binding]; other site"
/db_xref="CDD:48592"
misc_feature 182155..182697
/locus_tag="Tola_0168"
/note="Glutathione S-transferase [Posttranslational
modification, protein turnover, chaperones]; Region: Gst;
COG0625"
/db_xref="CDD:30970"
misc_feature order(182236..182238,182272..182277,182281..182286,
182293..182295)
/locus_tag="Tola_0168"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:48592"
misc_feature 182335..182679
/locus_tag="Tola_0168"
/note="C-terminal, alpha helical domain of an unknown
subfamily 3 of Glutathione S-transferases; Region:
GST_C_3; cd03194"
/db_xref="CDD:198303"
misc_feature order(182344..182346,182365..182367,182551..182553,
182560..182565,182572..182574,182584..182586)
/locus_tag="Tola_0168"
/note="putative N-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:198303"
misc_feature order(182344..182349,182356..182361,182368..182370,
182476..182478)
/locus_tag="Tola_0168"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:198303"
misc_feature order(182365..182367,182377..182382,182389..182394,
182575..182577,182584..182586)
/locus_tag="Tola_0168"
/note="putative substrate binding pocket (H-site)
[chemical binding]; other site"
/db_xref="CDD:198303"
gene complement(182806..184074)
/locus_tag="Tola_0169"
/db_xref="GeneID:7885678"
CDS complement(182806..184074)
/locus_tag="Tola_0169"
/EC_number="2.5.1.49"
/inference="protein motif:TFAM:TIGR01326"
/note="KEGG: aha:AHA_0506 O-acetylhomoserine sulfhydrylase
MetY;
TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase;
PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent
protein; aromatic amino acid beta-eliminating
lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS
aminotransferase"
/codon_start=1
/transl_table=11
/product="O-acetylhomoserine/O-acetylserine sulfhydrylase"
/protein_id="YP_002891385.1"
/db_xref="GI:237806945"
/db_xref="InterPro:IPR000277"
/db_xref="InterPro:IPR000653"
/db_xref="InterPro:IPR001597"
/db_xref="InterPro:IPR006235"
/db_xref="GeneID:7885678"
/translation="MKDATLALHHGFQNDPTTKSVAVPIYQTVAYEFDNAQHGADLFN
LEVPGNIYTRIMNPTNDVLEKRLAALEGGIAGLVVSAGSAAINYAIQTLTRAGDNIVS
TPQLYGGTYTLFAHMFPSFGVDVRFARDDSPEAIAELIDDKTKAVYCESIGNPAGNIV
DLEGLARVAHAKGVPLVVDNTVASPVLCKPIQFGADIVVHSITKYVGGHGNSLGGVIV
DSGKFPWAEHAERFPQFSKPEASYHGVVYTETFGPAAFIARARTVPLRNTGSTLSPMN
AFLLLQGLETLSLRMERHVENARKVAEFLQNHAKVAWVSYAGLPNHPHHALAQKYMNG
TPSAILSFGLKEGYEAGVRFYDALKIFKRLVNIGDAKSLACHPASTTHRQMTLEEQAK
AGVKPEMIRLSVGIEAIEDILEDLDQALKA"
misc_feature complement(182809..184074)
/locus_tag="Tola_0169"
/note="O-acetylhomoserine aminocarboxypropyltransferase;
Validated; Region: PRK06084"
/db_xref="CDD:180392"
misc_feature complement(182812..184020)
/locus_tag="Tola_0169"
/note="CGS_like: Cystathionine gamma-synthase is a PLP
dependent enzyme and catalyzes the committed step of
methionine biosynthesis. This pathway is unique to
microorganisms and plants, rendering the enzyme an
attractive target for the development of...; Region:
CGS_like; cd00614"
/db_xref="CDD:99738"
misc_feature complement(order(183007..183009,183247..183252,
183256..183258,183289..183291,183436..183438,
183442..183444,183466..183468,183730..183732,
183739..183741,183754..183756,183823..183828,
183832..183837,183913..183915,183919..183921,
183976..183981,183985..183996))
/locus_tag="Tola_0169"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99738"
misc_feature complement(order(183436..183438,183463..183468,
183472..183474,183538..183540,183625..183627,
183754..183756,183826..183834))
/locus_tag="Tola_0169"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:99738"
misc_feature complement(order(183463..183468,183472..183474,
183529..183531,183538..183540,183754..183756,
183826..183834))
/locus_tag="Tola_0169"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99738"
misc_feature complement(183463..183465)
/locus_tag="Tola_0169"
/note="catalytic residue [active]"
/db_xref="CDD:99738"
gene complement(184256..185704)
/locus_tag="Tola_0170"
/db_xref="GeneID:7885679"
CDS complement(184256..185704)
/locus_tag="Tola_0170"
/inference="protein motif:TFAM:TIGR00711"
/note="TIGRFAM: drug resistance transporter, EmrB/QacA
subfamily;
PFAM: major facilitator superfamily MFS_1;
KEGG: asa:ASA_0435 EmrB/QacA family drug resistance
transporter"
/codon_start=1
/transl_table=11
/product="EmrB/QacA subfamily drug resistance transporter"
/protein_id="YP_002891386.1"
/db_xref="GI:237806946"
/db_xref="InterPro:IPR001411"
/db_xref="InterPro:IPR004638"
/db_xref="InterPro:IPR006162"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:7885679"
/translation="MTKYQVTAKEKRILPWLAAVGFFMQALDGTILNTALPAIAADFH
ESPLQMQAAIISYMLTVAMLIPASGWLADRFGTRHVFLFSIFLFTAGSLFCAESTSLS
QMVIARIIQGVGGALLVPVGRLTILRVFPKEEFLSAMSMVVIPGLIGPLIGPLLGGLL
VEHATWQWIFLINLPIGLIGCVLAFFFMPNIREKTASFDWKGYLFFSSGVVLLSIAIQ
RLGEPDASVTSFLLLAIPGALGLYTYFWHSQRHPHALFSRALFKITSFRIGILGNLIA
RLGSGAIPFLTPLFLQVALGFNPTHAGLTMVPIALGAMSTKLLANWVVRRLGFRPVLM
LNTLLLGALIAGFSSVSNETPYALLLLYLALLGVFNSMQFTAMNTLTLSELEREEASS
GNSLLSVVMQLSMSLGVAISATLFALFYGSGTVLKGLQANSSQQAEILSAFHDTYITV
GCLSMLATLIFRRLPQKNHSLSSAEEEPVIRR"
misc_feature complement(184310..185659)
/locus_tag="Tola_0170"
/note="putative transporter; Provisional; Region:
PRK10504"
/db_xref="CDD:182502"
misc_feature complement(<184982..185659)
/locus_tag="Tola_0170"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(184985..184987,184994..184996,
185006..185008,185018..185020,185060..185062,
185069..185074,185081..185086,185093..185095,
185255..185257,185273..185278,185285..185290,
185324..185326,185333..185338,185345..185350,
185357..185362,185498..185503,185507..185512,
185522..185524,185531..185536,185543..185545,
185594..185599,185603..185611,185618..185620))
/locus_tag="Tola_0170"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(185732..186520)
/locus_tag="Tola_0171"
/db_xref="GeneID:7885680"
CDS complement(185732..186520)
/locus_tag="Tola_0171"
/inference="protein motif:TFAM:TIGR01726"
/note="TIGRFAM: polar amino acid ABC transporter, inner
membrane subunit;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: ppf:Pput_0690 polar amino acid ABC transporter,
inner membrane subunit"
/codon_start=1
/transl_table=11
/product="polar amino acid ABC transporter inner membrane
subunit"
/protein_id="YP_002891387.1"
/db_xref="GI:237806947"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR010065"
/db_xref="GeneID:7885680"
/translation="MNRNTIMTSKFKWQVTLVWLALMIGFIWFIAKFDLDMAYVWEKL
PFLAGLHLSPDGFIQGVPLTIYVCVIAMLASVILGLLAALGRLSLNPLAYGISTFYTS
FFRGTPLLLQVLLIYQGLPQIGPIPTAIPSGIIALALCYGAYLSEIFRSAIVAIPRGQ
WEAAMALGLKKHQTFLKVILPQSMKVAIPPGMAMFIAMLKDSSLVSVMGLWEIMFLAQ
SYGRSAYRYMEMLITAAVIYWILSFLLELIQARLEKVFHGGKTR"
misc_feature complement(185735..186358)
/locus_tag="Tola_0171"
/note="ABC-type arginine transport system, permease
component [Amino acid transport and metabolism]; Region:
ArtQ; COG4215"
/db_xref="CDD:33942"
misc_feature complement(185780..186337)
/locus_tag="Tola_0171"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(185780..185785,185792..185797,
185804..185809,185813..185818,185825..185830,
185858..185863,185900..185905,185912..185923,
185942..185944,185951..185956,185996..185998,
186047..186049,186056..186061,186071..186073,
186077..186082,186089..186091,186095..186097,
186170..186172,186176..186181,186188..186217,
186221..186232,186260..186262,186275..186280,
186287..186292))
/locus_tag="Tola_0171"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(185906..185923,186170..186214))
/locus_tag="Tola_0171"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(185828..185830,185858..185860,
185867..185869,185903..185905,186110..186112,
186170..186172))
/locus_tag="Tola_0171"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(185975..185977,185987..185992,
186008..186046))
/locus_tag="Tola_0171"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(186652..187485)
/locus_tag="Tola_0172"
/db_xref="GeneID:7885681"
CDS complement(186652..187485)
/locus_tag="Tola_0172"
/inference="protein motif:PFAM:PF00497"
/note="PFAM: extracellular solute-binding protein family
3;
SMART: extracellular solute-binding protein family 3;
KEGG: pfo:Pfl01_2802 extracellular solute-binding protein"
/codon_start=1
/transl_table=11
/product="family 3 extracellular solute-binding protein"
/protein_id="YP_002891388.1"
/db_xref="GI:237806948"
/db_xref="InterPro:IPR001638"
/db_xref="GeneID:7885681"
/translation="MMQYKTLQTLLLLAGSVTISHASVAGETLDRIKERGELIGVMDQ
AYPPYSFLNDKNEMDGMDVDLTKEFARRLGVKAKIETPAWEVTTAGNWRGRWDICICS
MTPDAQRARSLDFVTHYYSSPAVLVTSVNGNPLTKLADMEGKKIAAQQGGSYERYLNQ
TLKMEGYGAKPVTYPFKAVQVMPYGSEDLEYQDLSLGAGKRIDGLVSNLVTANERISK
MPGKFKIVGEPLFEDPNWVAIDKGDKEWRDTVVKIFDDMRKDGTLQKITVKWIGTDIS
R"
misc_feature complement(186673..187374)
/locus_tag="Tola_0172"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cd00134"
/db_xref="CDD:29040"
misc_feature complement(186667..187362)
/locus_tag="Tola_0172"
/note="Bacterial extracellular solute-binding proteins,
family 3; Region: SBP_bac_3; pfam00497"
/db_xref="CDD:201266"
misc_feature complement(order(186862..186864,187027..187029,
187159..187161,187234..187236,187348..187350))
/locus_tag="Tola_0172"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29040"
misc_feature complement(order(186883..186885,186910..186912,
186922..186924))
/locus_tag="Tola_0172"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:29040"
misc_feature complement(order(186778..186780,186781..186789))
/locus_tag="Tola_0172"
/note="hinge residues; other site"
/db_xref="CDD:29040"
gene 187696..189267
/gene="nhaB"
/locus_tag="Tola_0173"
/db_xref="GeneID:7885682"
CDS 187696..189267
/gene="nhaB"
/locus_tag="Tola_0173"
/inference="protein motif:TFAM:TIGR00774"
/note="involved in regulation of intracellular pH under
alkaline conditions"
/codon_start=1
/transl_table=11
/product="sodium/proton antiporter"
/protein_id="YP_002891389.1"
/db_xref="GI:237806949"
/db_xref="InterPro:IPR004671"
/db_xref="InterPro:IPR004680"
/db_xref="GeneID:7885682"
/translation="MVASMASALARNFLGSTPRWYKMTIVMFLIINPFIVALNPFVAG
WLLVAEFIFTLSMALKCYPLLPGGLLALEAVFSGLTSAEQVKHELSANLEVLLLLMFM
VAGIYFVRQLLLYVFTKLLISVRSKIALSLAFSVMAAFLSAFLDALTVVAVVISISVG
FYSVYHKYVSTHPEHDINNDDSIHKQHHADLEQFRAFLRSLLMHAAVGTALGGVCTLV
GEPQNLIIGEMAGWNFSEFFIRMSAVSIPVLICGLATCVLMEKLKWFGYGTVIPESVY
LILKQSADHDDAHRTTQERLKLVCQAIICVWLIVGLAFHLAAVGLIGLSVIILATTFT
GVSDEHAIGRAFTESLPFTALLSVFFVVVAVIIDQELFRPLIQMVLSAPQEMQLTLFY
IANGVLSMVSDNVFVGTVYINEAHTALVNNVISRDHFDLLAVAINTGTNLPSVATPNG
QAAFLFLLTSTLAPLVRMSYGRMMWMALPYTIVLAGVGLLSTMYLLPDMTQWFYESGW
LQHKAAIPVITPASH"
misc_feature 187696..189222
/gene="nhaB"
/locus_tag="Tola_0173"
/note="sodium/proton antiporter; Reviewed; Region: nhaB;
PRK09547"
/db_xref="CDD:181942"
misc_feature order(187918..187923,187966..188019,188086..188136,
188140..188184,188269..188277,188290..188361,
188425..188469,188581..188619,188641..188685,
188728..188784,188854..188901,188986..189003,
189010..189051,189127..189165)
/gene="nhaB"
/locus_tag="Tola_0173"
/note="transmembrane helices; other site"
/db_xref="CDD:29728"
gene 189337..190230
/locus_tag="Tola_0174"
/db_xref="GeneID:7885683"
CDS 189337..190230
/locus_tag="Tola_0174"
/inference="protein motif:PFAM:PF02574"
/note="PFAM: homocysteine S-methyltransferase;
KEGG: pfo:Pfl01_2779 homocysteine S-methyltransferase"
/codon_start=1
/transl_table=11
/product="homocysteine S-methyltransferase"
/protein_id="YP_002891390.1"
/db_xref="GI:237806950"
/db_xref="InterPro:IPR003726"
/db_xref="GeneID:7885683"
/translation="MSKVQILDGGMGRELKRIGAPFQQPEWSALALLDAPEYVTMAHN
AFIGSGADIITTNSYAVVPFHIGEVRFTERGHALAQLAAEIARACADKAAHPVTVAGS
LSPVLGSYRPDLFQMEAALRIYRVLIAAQEPFVDHWLAETQSSIAEVKAVRQALGDNS
KPLWVSFTLDDEPAGGQALLRSGETVTDAVAAAIGLNVSAILFNCSQPEVMTNAVHDA
VAEIQRQGKAIPVGVYANAFPAQSKEAEANAELDEIRADLNPDAYLNWAKKWIAAGAT
IIGGCCGITPEHIAQLAKDLK"
misc_feature 189337..190227
/locus_tag="Tola_0174"
/note="Homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Amino acid transport and
metabolism]; Region: MHT1; COG2040"
/db_xref="CDD:32223"
misc_feature 189343..190047
/locus_tag="Tola_0174"
/note="Methionine synthase I (cobalamin-dependent),
methyltransferase domain [Amino acid transport and
metabolism]; Region: MetH; cl14105"
/db_xref="CDD:213130"
gene complement(190279..190560)
/locus_tag="Tola_0175"
/db_xref="GeneID:7885684"
CDS complement(190279..190560)
/locus_tag="Tola_0175"
/inference="protein motif:PFAM:PF00639"
/note="PFAM: PpiC-type peptidyl-prolyl cis-trans
isomerase;
KEGG: eca:ECA4216 peptidyl-prolyl cis-trans isomerase C"
/codon_start=1
/transl_table=11
/product="PpiC-type peptidyl-prolyl cis-trans isomerase"
/protein_id="YP_002891391.1"
/db_xref="GI:237806951"
/db_xref="InterPro:IPR000297"
/db_xref="GeneID:7885684"
/translation="MARTASALHILVKTEAQALDIMKQLAAGADFQQLAKKYSTCPSK
KRGGDLGEFKKGDMVASFDNAVFSCELLQPVGPVKTRFGYHIIKVLYRS"
misc_feature complement(190282..190560)
/locus_tag="Tola_0175"
/note="PPIC-type PPIASE domain; Region: Rotamase_2;
cl08278"
/db_xref="CDD:208845"
gene complement(190664..192367)
/locus_tag="Tola_0176"
/db_xref="GeneID:7885685"
CDS complement(190664..192367)
/locus_tag="Tola_0176"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: vsp:VS_3040 predicted membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891392.1"
/db_xref="GI:237806952"
/db_xref="GeneID:7885685"
/translation="MPLSRFVLSGLLIALVGCNTTSVPGKNTQTLVASDMSARLQQEL
SPLFSGTIQRQAEQAVFTPCGSNQQWQLVMDDSFWQQWQQLGSPQTLQASLSGQLSPG
AGRGAPFSLEAKHVSRITTDQSICQNSSENYLLKAGNNQPFWSLIIDGQQASLTTPDG
VDSYQLTDVTRPAEKQLQLALDNQSGKQATLNLRPGYCQDADSQQWLGYVVTLELDDG
QTLSGCAEQGKSLTQQQPAHDWQGHDDTQKADISLVLESNYQAKMIHTRETGPEVIYD
GAWQPQNDQTIRVMFNQRMGLPINESITFHWKDNTLTADYRELEAGKAYFDKPLVLTT
KDGRENTVTTDSATLPTGSAAVVVAPPATQEIPAGESSFAQNETVLNGAAAIAATSMT
SGMANNSSAVMSGTATAATLASFSAGILQASVQADNTIEQALRQFLESSGSQASGTQY
RYVKADLNGDGSLDALAEMNWCDKSGCVWLVLQGNNGQYQQVGRLEGFSGTVMVAPSA
HNGWFDLLIPSAEQANTYLTLEHDGSAYPSRPAVSNQPQPDPNTLLQLRFEGDNWLTI
P"
misc_feature complement(191663..192103)
/locus_tag="Tola_0176"
/note="Predicted membrane protein [Function unknown];
Region: COG3650"
/db_xref="CDD:33448"
gene complement(192434..193234)
/locus_tag="Tola_0177"
/db_xref="GeneID:7885686"
CDS complement(192434..193234)
/locus_tag="Tola_0177"
/inference="protein motif:TFAM:TIGR00099"
/note="TIGRFAM: Cof-like hydrolase; HAD-superfamily
hydrolase, subfamily IIB;
PFAM: Haloacid dehalogenase domain protein hydrolase type
3; sucrose-6F-phosphate phosphohydrolase; Haloacid
dehalogenase domain protein hydrolase;
KEGG: aha:AHA_0035 Cof family hydrolase"
/codon_start=1
/transl_table=11
/product="cof family hydrolase"
/protein_id="YP_002891393.1"
/db_xref="GI:237806953"
/db_xref="InterPro:IPR000150"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006379"
/db_xref="InterPro:IPR006380"
/db_xref="InterPro:IPR013200"
/db_xref="GeneID:7885686"
/translation="MYKVVISDLDGTLLNNQHHVSTHTRKVLKQLVAEGTKFIVATGR
HHIDVKAIRTALGLDIYLVTSNGAVVTDKQDEMIFNRTLPADIAQELSEMPLPDPEIA
VNIYTPDAWFTNKEMPEYLEYHKDTGFCYTKTDLVVLDKSSINKFFFIAEHEPLLELE
NTLLERYAGQLSIAFSQPDCLEVMALGVNKGAAITSILEQHDIPLSSAIAFGDGMNDY
EMLSVVGHGVVMGNAHDRLKMALPDLPRAGINDEDGVAEYLQQLLLAE"
misc_feature complement(192443..193234)
/locus_tag="Tola_0177"
/note="putative hydrolase; Provisional; Region: PRK10976"
/db_xref="CDD:182878"
misc_feature complement(<192989..193225)
/locus_tag="Tola_0177"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature complement(order(193106..193111,193205..193213))
/locus_tag="Tola_0177"
/note="active site"
/db_xref="CDD:119389"
misc_feature complement(193196..193213)
/locus_tag="Tola_0177"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature complement(193109..193111)
/locus_tag="Tola_0177"
/note="motif II; other site"
/db_xref="CDD:119389"
misc_feature complement(192563..>192676)
/locus_tag="Tola_0177"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:212620"
gene complement(193450..195597)
/locus_tag="Tola_0178"
/db_xref="GeneID:7885687"
CDS complement(193450..195597)
/locus_tag="Tola_0178"
/EC_number="2.7.6.5"
/inference="protein motif:TFAM:TIGR00691"
/note="KEGG: aha:AHA_0039 guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase ((ppGpp)ase);
TIGRFAM: RelA/SpoT family protein;
PFAM: RelA/SpoT domain protein; TGS domain protein; amino
acid-binding ACT domain protein; metal-dependent
phosphohydrolase HD sub domain;
SMART: metal-dependent phosphohydrolase HD region"
/codon_start=1
/transl_table=11
/product="(p)ppGpp synthetase I SpoT/RelA"
/protein_id="YP_002891394.1"
/db_xref="GI:237806954"
/db_xref="InterPro:IPR002912"
/db_xref="InterPro:IPR003607"
/db_xref="InterPro:IPR004095"
/db_xref="InterPro:IPR004811"
/db_xref="InterPro:IPR006674"
/db_xref="InterPro:IPR007685"
/db_xref="GeneID:7885687"
/translation="MYLFEDLKTLLGSYLPEEQVTRIQDAFLVARDAHEGQTRSSGEP
YITHPVAVATILAEMHLDYETISAALMHDVIEDTPVTKEQLALQFGPAVAELVSGVSK
LDKLKFRDHKEAQAENFRKMVMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
ETLEIFSPIANRLGIHTFKSELEELGFEALYPMRARILRESVKRARGNRKEVIDSVYK
EIAGRLQDAGIKAEVCGREKNLYSIYNKMVKKELRFYEVMDIYAFRVIVDDIDTCYRV
LGQMHSLYKPRPGRFKDYIAIPKTNGYQSLHTSLVGPHGVPVEIQIRTEYMDQMADKG
VAAHWAYKSNGDITGSTAQIRAQRWMKNLLELQQSAGSSFEFIESVKTDLFPDEIYVF
TPEGRILELPAGATPVDFAYAVHTDIGNSCVGARVERQPFPLSRPLTSGQTIEIITAP
GARPNAAWLNFVVTSRARTKIRQFLKNLRAEESIILGRRLLSHSLGGKKFEEIPAENL
QQVLQDTRHESLDGLLADIGLGNQMSVVIARRLLGQHEQEPEKKTSPAYRKLPIRGAS
GMLVSFAKCCRPIPGDAIVAHISPGKGLVVHQEGCPNIRGYNREPDKYQPVQWDMEHL
GEQEFKTGIQVEVVNHQGVLAQLANVISATGANIHSISTEEKDARVYQVNLLITAKHR
VHLADIMRKIRVMPDVLRVNRTTSRLRTKEADA"
misc_feature complement(193489..195597)
/locus_tag="Tola_0178"
/note="bifunctional (p)ppGpp synthetase II/
guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase;
Provisional; Region: PRK11092"
/db_xref="CDD:182957"
misc_feature complement(195100..195471)
/locus_tag="Tola_0178"
/note="Metal dependent phosphohydrolases with conserved
'HD' motif; Region: HDc; cd00077"
/db_xref="CDD:28958"
misc_feature complement(order(195181..195183,195379..195384,
195454..195456))
/locus_tag="Tola_0178"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:28958"
misc_feature complement(195379..195381)
/locus_tag="Tola_0178"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28958"
misc_feature complement(194605..194958)
/locus_tag="Tola_0178"
/note="Nucleotidyltransferase (NT) domain of RelA- and
SpoT-like ppGpp synthetases and hydrolases; Region:
NT_Rel-Spo_like; cd05399"
/db_xref="CDD:143389"
misc_feature complement(order(194605..194607,194629..194631,
194635..194637,194641..194643,194677..194679,
194689..194691,194695..194697,194701..194703,
194716..194718,194722..194724,194806..194808,
194818..194823,194884..194886,194890..194892))
/locus_tag="Tola_0178"
/note="synthetase active site [active]"
/db_xref="CDD:143389"
misc_feature complement(order(194605..194607,194635..194637,
194641..194643,194677..194679,194689..194691,
194695..194697,194701..194703,194716..194718,
194722..194724,194890..194892))
/locus_tag="Tola_0178"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143389"
misc_feature complement(order(194641..194643,194821..194823))
/locus_tag="Tola_0178"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143389"
misc_feature complement(194254..194433)
/locus_tag="Tola_0178"
/note="TGS_RelA_SpoT: The RelA (SpoT) protein, also
referred to as ppGpp hydrolase/synthetase, is a
ribosome-associated protein that is activated during amino
acid starvation and thought to mediate the stringent
response. RelA contains a TGS domain, named after...;
Region: TGS_RelA_SpoT; cd01668"
/db_xref="CDD:133438"
misc_feature complement(193489..193701)
/locus_tag="Tola_0178"
/note="ACT domain found C-terminal of the RelA/SpoT
domains; Region: ACT_RelA-SpoT; cd04876"
/db_xref="CDD:153148"
gene complement(195728..196012)
/gene="rpoZ"
/locus_tag="Tola_0179"
/db_xref="GeneID:7885688"
CDS complement(195728..196012)
/gene="rpoZ"
/locus_tag="Tola_0179"
/inference="protein motif:TFAM:TIGR00690"
/note="promotes RNA polymerase assembly or stability;
latches the N- and C-terminal regions of the beta' subunit
thereby facilitating its interaction with the beta and
alpha subunits"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit omega"
/protein_id="YP_002891395.1"
/db_xref="GI:237806955"
/db_xref="InterPro:IPR003716"
/db_xref="InterPro:IPR006110"
/db_xref="GeneID:7885688"
/translation="MARVTVEDAVKQVGNRFDLVLVAARRARQLAVQGKEPLVDEEND
KPTVIALREIEEGLISNQFMDAQERIEQQQQEASELAAVAALTQDRDYGF"
misc_feature complement(195818..196012)
/gene="rpoZ"
/locus_tag="Tola_0179"
/note="DNA-directed RNA polymerase subunit omega;
Reviewed; Region: rpoZ; PRK00392"
/db_xref="CDD:178998"
gene complement(196061..196690)
/locus_tag="Tola_0180"
/db_xref="GeneID:7885689"
CDS complement(196061..196690)
/locus_tag="Tola_0180"
/EC_number="2.7.4.8"
/inference="protein motif:TFAM:TIGR03263"
/note="KEGG: aha:AHA_0041 guanylate kinase;
TIGRFAM: guanylate kinase;
PFAM: guanylate kinase;
SMART: guanylate kinase/L-type calcium channel region"
/codon_start=1
/transl_table=11
/product="guanylate kinase"
/protein_id="YP_002891396.1"
/db_xref="GI:237806956"
/db_xref="InterPro:IPR008144"
/db_xref="InterPro:IPR008145"
/db_xref="InterPro:IPR017665"
/db_xref="GeneID:7885689"
/translation="MAAAGTLFIISSPSGAGKSSLLTALLSRYNSDGRMALSVSHTTR
AMRPGEENGVHYHFVSKEEFQALIARDAFFEWAEVFGNYYGTSKELIEQALAKGIDVF
LDIDWQGARQIRELYSATQSIFVLPPSLPILEQRLIGRGQDSTEVIAKRMAQAVSEMS
HYPEYDYLIINDDFEQALQQLHAIVLAGRAKLRPQAICHAELLNQLLAG"
misc_feature complement(196115..196678)
/locus_tag="Tola_0180"
/note="Guanylate kinase [Nucleotide transport and
metabolism]; Region: Gmk; COG0194"
/db_xref="CDD:30543"
misc_feature complement(196148..196672)
/locus_tag="Tola_0180"
/note="Guanosine monophosphate kinase (GMPK, EC 2.7.4.8),
also known as guanylate kinase (GKase), catalyzes the
reversible phosphoryl transfer from adenosine triphosphate
(ATP) to guanosine monophosphate (GMP) to yield adenosine
diphosphate (ADP) and guanosine...; Region: GMPK; cd00071"
/db_xref="CDD:73180"
misc_feature complement(order(196439..196441,196454..196456,
196523..196525,196550..196552,196559..196561,
196580..196582,196637..196639,196655..196657))
/locus_tag="Tola_0180"
/note="catalytic site [active]"
/db_xref="CDD:73180"
misc_feature complement(order(196637..196639,196655..196657))
/locus_tag="Tola_0180"
/note="G-X2-G-X-G-K; other site"
/db_xref="CDD:73180"
gene complement(196801..196968)
/gene="rpmG"
/locus_tag="Tola_0181"
/db_xref="GeneID:7885690"
CDS complement(196801..196968)
/gene="rpmG"
/locus_tag="Tola_0181"
/inference="protein motif:TFAM:TIGR01023"
/note="in Escherichia coli BM108, a mutation that results
in lack of L33 synthesis had no effect on ribosome
synthesis or function; there are paralogous genes in
several bacterial genomes, and a CXXC motif for zinc
binding and an upstream regulation region of the paralog
lacking this motif that are regulated by zinc similar to
other ribosomal proteins like L31; the proteins in this
group lack the CXXC motif"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L33"
/protein_id="YP_002891397.1"
/db_xref="GI:237806957"
/db_xref="InterPro:IPR001705"
/db_xref="GeneID:7885690"
/translation="MAKGAREKIRLNSSAGTGHFYTTTKNKRTMPEKMEIKKFDPVVR
QHVIYKEGKIK"
misc_feature complement(196810..196968)
/gene="rpmG"
/locus_tag="Tola_0181"
/note="50S ribosomal protein L33; Validated; Region: rpmG;
PRK00595"
/db_xref="CDD:179075"
gene complement(196980..197216)
/gene="rpmB"
/locus_tag="Tola_0182"
/db_xref="GeneID:7885691"
CDS complement(196980..197216)
/gene="rpmB"
/locus_tag="Tola_0182"
/inference="protein motif:TFAM:TIGR00009"
/note="required for 70S ribosome assembly"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L28"
/protein_id="YP_002891398.1"
/db_xref="GI:237806958"
/db_xref="InterPro:IPR001383"
/db_xref="GeneID:7885691"
/translation="MSRVCQVTGKRPTVGNNRSHAKNATRRRFLPNLQSHRFWVEGEK
RFVTLRLTPKGMRIIDKLGIEAVLADIRARGEKV"
misc_feature complement(196989..197216)
/gene="rpmB"
/locus_tag="Tola_0182"
/note="50S ribosomal protein L28; Reviewed; Region: rpmB;
PRK00359"
/db_xref="CDD:178987"
gene complement(197357..198031)
/gene="radC"
/locus_tag="Tola_0183"
/db_xref="GeneID:7885692"
CDS complement(197357..198031)
/gene="radC"
/locus_tag="Tola_0183"
/inference="protein motif:TFAM:TIGR00608"
/note="Involved in DNA double-strand break repair and
recombination. Promotes the annealing of complementary
single-stranded DNA and by simulation of RAD51
recombinase"
/codon_start=1
/transl_table=11
/product="DNA repair protein RadC"
/protein_id="YP_002891399.1"
/db_xref="GI:237806959"
/db_xref="InterPro:IPR001405"
/db_xref="GeneID:7885692"
/translation="MAICDWPEDERPREKLLQRGASALSDAELLAIFLRTGVAGCNAI
ELARNLLQEFGSLRALLGAEQAQFCQAHGLGPAKYVQLQAVLEMSNRYLSECLQRGDS
LTSPQLVRRYLQAQLRDRPREVFAMLLLDNQHRVLRFCELFFGTIDAASVYPREIVQT
VLKHNAAAVILCHNHPSGVAEPSHADRHITERICDALRLIDVRVLDHFVIGDGDPVSF
AERGWL"
misc_feature complement(197360..198031)
/gene="radC"
/locus_tag="Tola_0183"
/note="hypothetical protein; Reviewed; Region: PRK00024"
/db_xref="CDD:178801"
misc_feature complement(197375..197713)
/gene="radC"
/locus_tag="Tola_0183"
/note="Mov34/MPN/PAD-1 family; Region: MPN_DUF2466;
cd08071"
/db_xref="CDD:163702"
misc_feature complement(order(197474..197476,197483..197485,
197507..197509,197513..197515,197663..197665))
/gene="radC"
/locus_tag="Tola_0183"
/note="MPN+ (JAMM) motif; other site"
/db_xref="CDD:163702"
misc_feature complement(order(197474..197476,197507..197509,
197513..197515))
/gene="radC"
/locus_tag="Tola_0183"
/note="Zinc-binding site [ion binding]; other site"
/db_xref="CDD:163702"
gene 198137..199366
/locus_tag="Tola_0184"
/db_xref="GeneID:7885693"
CDS 198137..199366
/locus_tag="Tola_0184"
/EC_number="6.3.2.5"
/inference="protein motif:TFAM:TIGR00521"
/note="KEGG: asa:ASA_4230 phosphopantothenoylcysteine
decarboxylase/phosphopantothenate--cysteine ligase;
TIGRFAM: phosphopantothenoylcysteine
decarboxylase/phosphopantothenate/cysteine ligase;
PFAM: DNA/pantothenate metabolism flavoprotein domain
protein; flavoprotein"
/codon_start=1
/transl_table=11
/product="phosphopantothenoylcysteine
decarboxylase/phosphopantothenate/cysteine ligase"
/protein_id="YP_002891400.1"
/db_xref="GI:237806960"
/db_xref="InterPro:IPR003382"
/db_xref="InterPro:IPR005252"
/db_xref="InterPro:IPR007085"
/db_xref="GeneID:7885693"
/translation="MDLGCILMQLQNKRILLGVTGGIAAYKAAEIIRRLREHGAEVRV
VMTDAAKEFITPLTLQAVSGHIVANSMFDPQAEAGMGHIELAKWADLVLVAPATANVI
SRLTTGMGDELLTTLCLASPAPLAIAPAMNMQMYLHAATQNNLKVLAERGVQIWGPGI
GSQACGDVGPGRMLDPLDIVEEVIRFFQPAPHSELSFLITAGPTREAIDPVRYISNHS
SGKMGFALAEAAAALGAKVTLVAGPVNLPTPKGVNRVDVESALDMQAAVDAEVSRHQI
FIGCAAVADYRTESVAPQKMKKQADSDTLTLQLVKNPDIIAGVAARADKPFVVGFAAE
TQDVARYALDKLQRKGLDMIAANDVSRTEQGFNSDQNALTVFWQNEQQELPLASKQQV
AQQLISLIIQRYQHETD"
misc_feature 198158..199354
/locus_tag="Tola_0184"
/note="bifunctional phosphopantothenoylcysteine
decarboxylase/phosphopantothenate synthase; Validated;
Region: PRK05579"
/db_xref="CDD:180143"
misc_feature 198173..198559
/locus_tag="Tola_0184"
/note="Flavoprotein; Region: Flavoprotein; pfam02441"
/db_xref="CDD:202241"
misc_feature 198725..199264
/locus_tag="Tola_0184"
/note="DNA / pantothenate metabolism flavoprotein; Region:
DFP; pfam04127"
/db_xref="CDD:202899"
gene 199353..199808
/gene="dut"
/locus_tag="Tola_0185"
/db_xref="GeneID:7885694"
CDS 199353..199808
/gene="dut"
/locus_tag="Tola_0185"
/inference="protein motif:TFAM:TIGR00576"
/note="catalyzes the formation of dUMP from dUTP"
/codon_start=1
/transl_table=11
/product="deoxyuridine 5'-triphosphate
nucleotidohydrolase"
/protein_id="YP_002891401.1"
/db_xref="GI:237806961"
/db_xref="InterPro:IPR008180"
/db_xref="InterPro:IPR008181"
/db_xref="GeneID:7885694"
/translation="MKQIELKILDARIGNEFPLPEYATPGSAGLDLRACLDAAVVLAP
GETQLIPTGLAIHIADPGLCATILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSVWN
RGNTTFTIQPGERIAQLVFMPVVQASFNIVDDFDTSERGEGGFGSSGRH"
misc_feature 199434..199715
/gene="dut"
/locus_tag="Tola_0185"
/note="Trimeric dUTP diphosphatases; Region:
trimeric_dUTPase; cd07557"
/db_xref="CDD:143638"
misc_feature order(199434..199439,199473..199475,199488..199493,
199497..199499,199548..199550,199554..199571,
199587..199595,199611..199613,199620..199622,
199641..199643,199647..199649,199653..199655,
199659..199661,199671..199685,199692..199694,
199704..199706)
/gene="dut"
/locus_tag="Tola_0185"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:143638"
misc_feature order(199560..199568,199611..199619,199626..199628,
199638..199643)
/gene="dut"
/locus_tag="Tola_0185"
/note="active site"
/db_xref="CDD:143638"
gene complement(199883..200524)
/gene="pyrE"
/locus_tag="Tola_0186"
/db_xref="GeneID:7885695"
CDS complement(199883..200524)
/gene="pyrE"
/locus_tag="Tola_0186"
/EC_number="2.4.2.10"
/inference="protein motif:TFAM:TIGR00336"
/note="involved in fifth step of pyrimidine biosynthesis;
converts orotidine 5'-phosphate and diphosphate to orotate
and 5-phospho-alpha-D-ribose 1-diphosphate"
/codon_start=1
/transl_table=11
/product="orotate phosphoribosyltransferase"
/protein_id="YP_002891402.1"
/db_xref="GI:237806962"
/db_xref="InterPro:IPR000209"
/db_xref="InterPro:IPR000836"
/db_xref="InterPro:IPR004467"
/db_xref="GeneID:7885695"
/translation="MKAYQREFIEFALEKQVLKFGEFTLKSGRKSPYFFNAGLFNSGR
DLAKLGRYYAAALVDSGIAYDVLFGPAYKGIPIASATAVQLAELHDQDVPWCFNRKEA
KDHGEGGNLVGSPLKGRIMLVDDVITAGTAIRESMDLIQANGAELAGVLIALDRQEKG
KGELSAIQEVQRDYNAPVIAIITLGDLIRYLETQPEMTEYLEKVKAYRASYGV"
misc_feature complement(200027..200380)
/gene="pyrE"
/locus_tag="Tola_0186"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature complement(order(200057..200059,200129..200143,
200147..200155,200306..200308,200312..200314))
/gene="pyrE"
/locus_tag="Tola_0186"
/note="active site"
/db_xref="CDD:206754"
gene complement(200558..201271)
/locus_tag="Tola_0187"
/db_xref="GeneID:7885696"
CDS complement(200558..201271)
/locus_tag="Tola_0187"
/EC_number="2.7.7.56"
/inference="protein motif:TFAM:TIGR01966"
/note="KEGG: swd:Swoo_4568 ribonuclease PH;
TIGRFAM: ribonuclease PH;
PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic
domain 2"
/codon_start=1
/transl_table=11
/product="ribonuclease PH"
/protein_id="YP_002891403.1"
/db_xref="GI:237806963"
/db_xref="InterPro:IPR001247"
/db_xref="InterPro:IPR002381"
/db_xref="InterPro:IPR015847"
/db_xref="GeneID:7885696"
/translation="MRPSGRTPEQLRPITITRQYTCHAEGSVLVEFGRTKVLCTATVT
EGVPRFLKGKGQGWVTAEYGMLPRSTHSRMHREAASGKQGGRTLEIQRLIARSLRAAV
DLTKLGENTITVDCDVLQADGGTRTASITGACVALADALNWMLAKGSLKTNPLNFMVA
AVSVGIYEGAPVCDLDYDEDSSAETDMNLVMTETGKMIEIQGTAEGEPFSQEELMQLL
ELGKQGIQQIIQHQRQALA"
misc_feature complement(200627..201271)
/locus_tag="Tola_0187"
/note="ribonuclease PH; Reviewed; Region: rph; PRK00173"
/db_xref="CDD:178914"
misc_feature complement(200630..201244)
/locus_tag="Tola_0187"
/note="Ribonuclease PH; Region: RNase_PH_bact; cd11362"
/db_xref="CDD:206767"
misc_feature complement(order(200630..200632,200639..200641,
200645..200662,200666..200668,200672..200686,
200909..200917,200921..200923,200927..200929,
200933..200935,200975..200977,200984..200986,
200996..200998,201005..201010,201014..201019,
201041..201046,201053..201055,201059..201076,
201080..201082,201086..201088,201146..201148,
201152..201154,201158..201160,201164..201166,
201170..201172,201200..201214))
/locus_tag="Tola_0187"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:206767"
misc_feature complement(order(200714..200716,200732..200734,
200894..200911,201014..201016,201077..201079))
/locus_tag="Tola_0187"
/note="active site"
/db_xref="CDD:206767"
gene 201398..202258
/locus_tag="Tola_0188"
/db_xref="GeneID:7885697"
CDS 201398..202258
/locus_tag="Tola_0188"
/inference="protein motif:PFAM:PF03755"
/note="PFAM: YicC domain protein; domain of unknown
function DUF1732;
KEGG: aha:AHA_4225 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891404.1"
/db_xref="GI:237806964"
/db_xref="InterPro:IPR005229"
/db_xref="InterPro:IPR013527"
/db_xref="InterPro:IPR013551"
/db_xref="GeneID:7885697"
/translation="MIHSMTGYARKEFKGDWGTAVWEIRSVNQRYLETYFRLPESFRN
LEAVLRERFRQGLERGKIECNLRFESQVSQGQLQINEALAEQLIDNALWVIDRAGQGQ
LNPVDILRWPGVMEGEEQDMDALNVILLTAFDEVFKEFIAARRSEGDKLKALLEQRLE
GVAVEAAKVREHMPAILNWQRQRLLDRLAEAKVELEPTRIEQEIVLLAQKIDVAEELD
RLDMHVTETRKIIGKGGACGRRLDFMMQEFNRESNTLASKSINAEVTQAAVELKVLIE
QMREQIQNVE"
misc_feature 201398..202255
/locus_tag="Tola_0188"
/note="hypothetical protein; Provisional; Region:
PRK11820"
/db_xref="CDD:183325"
misc_feature 201401..201856
/locus_tag="Tola_0188"
/note="YicC-like family, N-terminal region; Region:
YicC_N; pfam03755"
/db_xref="CDD:146410"
misc_feature 201998..202255
/locus_tag="Tola_0188"
/note="Domain of unknown function (DUF1732); Region:
DUF1732; pfam08340"
/db_xref="CDD:149411"
gene complement(202310..203602)
/locus_tag="Tola_0189"
/db_xref="GeneID:7885698"
CDS complement(202310..203602)
/locus_tag="Tola_0189"
/inference="protein motif:PFAM:PF00375"
/note="PFAM: sodium:dicarboxylate symporter;
KEGG: asa:ASA_1706 sodium:dicarboxylate symporter family
protein"
/codon_start=1
/transl_table=11
/product="sodium:dicarboxylate symporter"
/protein_id="YP_002891405.1"
/db_xref="GI:237806965"
/db_xref="InterPro:IPR001991"
/db_xref="GeneID:7885698"
/translation="MKMNKLTAMILISMLVGILTGHLYRSNVTDPASIAAFASNISIL
TDIFLRLIKMIIAPLVFSTLVVGIAKMGDSQTVGRVGIKAMAWFMTASLVSLALGLIM
VNLLQPGVGLNLPLPDVTAKSGISATAITLKDFVTHAIPRSVVEAMATNEILQLVIFS
LFFGVAASGMGEKAKPVVNVMESIANIMLKVTGYVMNFAPFAVFGAITALIAKQGLGI
LLTYGTFVGEVYGSILVLWCLLLLMGSLFLGRRVLSLPKFIREPILLAFSTASSEAAY
PKTLQGLKRFGCSEKISSFVLPVGYSFNLDGSMMYCTFATMFIAQAYGMEISIAQQIT
MLLLLMVTSKGMAGVPRASLVVIAAAMAQFNIPEAGLLLLLGVDHFLDMARSATNVMG
NAIASSVVAKLEGELTESIEDDDDLLGDSVLVEEQATG"
misc_feature complement(202385..203599)
/locus_tag="Tola_0189"
/note="Na+/H+-dicarboxylate symporters [Energy production
and conversion]; Region: GltP; COG1301"
/db_xref="CDD:31492"
misc_feature complement(202382..203587)
/locus_tag="Tola_0189"
/note="Sodium:dicarboxylate symporter family; Region: SDF;
cl00573"
/db_xref="CDD:207114"
gene complement(203927..205036)
/locus_tag="Tola_0190"
/db_xref="GeneID:7885699"
CDS complement(203927..205036)
/locus_tag="Tola_0190"
/inference="protein motif:TFAM:TIGR00254"
/note="KEGG: aav:Aave_3646 diguanylate cyclase;
TIGRFAM: diguanylate cyclase;
PFAM: GGDEF domain containing protein;
SMART: GGDEF domain containing protein"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase"
/protein_id="YP_002891406.1"
/db_xref="GI:237806966"
/db_xref="InterPro:IPR000160"
/db_xref="GeneID:7885699"
/translation="MPFLKYIYVVFMGHIVMRQLIVESPCFQLFVRQAILAAISVHVL
FLLVFVYFSIPVLIVTNIGSLLLYIIALWLLRARSFKSIAALIWIDLIGHSLISSEVL
GWQSGFHFYLLLLVPMSFLYAFKSQAKRIFFIEAVLVIYLLLDYHSYGSPVMFELPSF
YSMLVRYINLVIFFIGLSYQLYVYNFLLQEDESPIPESATTDQLTGLDNRCAILSRID
EIFATSPYARQPMALIIAEVDHFKSMHERYGQSISDTALIHVAQILHDSIRHNDRASR
WGGGEFLLLLPGGSLTSAEQIAKRVQEKLLAAPLRKEGISLPVSLTFSVAELLPDESF
DQCLIRADTALQHGKQSGGNRIELASVDFATTSPA"
misc_feature complement(203966..204439)
/locus_tag="Tola_0190"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(204197..204199,204326..204328))
/locus_tag="Tola_0190"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(204194..204205,204209..204211,
204275..204277,204287..204289,204299..204304,
204311..204313))
/locus_tag="Tola_0190"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(204137..204139,204221..204223))
/locus_tag="Tola_0190"
/note="I-site; other site"
/db_xref="CDD:143635"
gene 205472..207005
/locus_tag="Tola_R0014"
/db_xref="GeneID:7885700"
rRNA 205472..207005
/locus_tag="Tola_R0014"
/product="16S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7885700"
gene 207055..207130
/locus_tag="Tola_R0015"
/note="tRNA-Glu1"
/db_xref="GeneID:7885701"
tRNA 207055..207130
/locus_tag="Tola_R0015"
/product="tRNA-Glu"
/db_xref="GeneID:7885701"
gene 207268..210154
/locus_tag="Tola_R0016"
/db_xref="GeneID:7885702"
rRNA 207268..210154
/locus_tag="Tola_R0016"
/product="23S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7885702"
gene 210283..210396
/locus_tag="Tola_R0017"
/db_xref="GeneID:7885703"
rRNA 210283..210396
/locus_tag="Tola_R0017"
/product="5S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7885703"
gene complement(210792..211256)
/locus_tag="Tola_0191"
/db_xref="GeneID:7885704"
CDS complement(210792..211256)
/locus_tag="Tola_0191"
/inference="protein motif:PFAM:PF04073"
/note="PFAM: YbaK/prolyl-tRNA synthetase associated
region;
KEGG: asa:ASA_3807 YbaK/EbsC protein"
/codon_start=1
/transl_table=11
/product="YbaK/prolyl-tRNA synthetase associated
domain-containing protein"
/protein_id="YP_002891407.1"
/db_xref="GI:237806967"
/db_xref="InterPro:IPR007214"
/db_xref="GeneID:7885704"
/translation="MTPAIRFLKHIGSEFKVHTYECNVSDDFGKHCAEQLRMEKGKVF
KTLLIQHGTQAVTAIIPVNMHLNLKASAKAAHLKHAIMMNPKDAERVTGYKLGGISPF
AQKKVLPTLLDESAFLYPSILVSGGKRGVSVEISPQALVQLLDASVAAISDK"
misc_feature complement(210804..211256)
/locus_tag="Tola_0191"
/note="This CD includes cysteinyl-tRNA(Pro) deacylases
from Haemophilus influenzae and Escherichia coli and other
related bacterial proteins. These trans-acting,
single-domain proteins are homologs of ProX and also the
cis-acting prolyl-tRNA synthetase (ProRS)...; Region:
YbaK_deacylase; cd00002"
/db_xref="CDD:88582"
misc_feature complement(order(210882..210884,210963..210968,
211122..211124))
/locus_tag="Tola_0191"
/note="putative deacylase active site [active]"
/db_xref="CDD:88582"
gene complement(211572..211853)
/locus_tag="Tola_0192"
/db_xref="GeneID:7885705"
CDS complement(211572..211853)
/locus_tag="Tola_0192"
/inference="protein motif:PFAM:PF06865"
/note="PFAM: protein of unknown function DUF1255;
KEGG: pmy:Pmen_2513 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891408.1"
/db_xref="GI:237806968"
/db_xref="InterPro:IPR009664"
/db_xref="GeneID:7885705"
/translation="MLQVNEYFSGNVKSIGFDLADQRATVGVMAPGEYEFGTGAPELM
VVIRGALTVQLPGATEWQTFSAGQEFNVPGNSKFQLKVATDTAYLCEYK"
misc_feature complement(211578..211853)
/locus_tag="Tola_0192"
/note="Protein of unknown function (DUF1255); Region:
DUF1255; pfam06865"
/db_xref="CDD:148466"
gene 212136..213677
/locus_tag="Tola_0193"
/db_xref="GeneID:7885706"
CDS 212136..213677
/locus_tag="Tola_0193"
/inference="protein motif:TFAM:TIGR03362"
/note="TIGRFAM: type VI secretion-associated protein,
VC_A0119 family;
PFAM: ImpA domain protein;
KEGG: pau:PA14_43050 hypothetical protein"
/codon_start=1
/transl_table=11
/product="type VI secretion-associated protein"
/protein_id="YP_002891409.1"
/db_xref="GI:237806969"
/db_xref="InterPro:IPR010657"
/db_xref="InterPro:IPR017739"
/db_xref="GeneID:7885706"
/translation="MKLNDTEMVNAIIAPVIGHAFPQGEDVRYDSDFEMVEAELAKLT
SVYKDHKTDWKLVLQLSYELLTTRSKDLRIVCWYAYAQLKVNGLVRLPAVLFMLQKVI
EQYWEQCFPVKIRARLAALIWLFDRIDYNENKYAENLSSDELNLLILSLESCDEILNG
KFDGEISFLQPKLQLLRDIRRRQNMSKIEPVLANPVSPNHTSVIDVLVPVLSTITEDN
DSIRIARYIQEQSRLLTIWFLSKDLADPRAYLLTRSSAWLQVVSAPLADAQGLTKLKP
LTANKLQEYQQKLSAKEFAVLIPELEVSLSKAPFWLDGHHWCAQALDGLGHHQMANHL
RDYLCSFLSKHPSLLELSFDDGSPFASETTKLWLSTASSEQMTNCAVFNNSADEQQPW
LMALAMAQENINHDISCLKQEIRSLQTLANTATSGRDKTMWLLALAKLCQQYQRHDLA
VFILEDIHQYIYQFRLNQWEPLLEKNVLQQLLFSLEKVNAKQHQEKIKEIKTNLYRMD
ISIAF"
misc_feature 212292..212468
/locus_tag="Tola_0193"
/note="ImpA-related N-terminal; Region: ImpA-rel_N;
pfam06812"
/db_xref="CDD:203522"
misc_feature 212703..213581
/locus_tag="Tola_0193"
/note="type VI secretion-associated protein, VC_A0119
family; Region: VI_chp_7; TIGR03362"
/db_xref="CDD:163234"
gene 213691..214185
/locus_tag="Tola_0194"
/db_xref="GeneID:7885707"
CDS 213691..214185
/locus_tag="Tola_0194"
/inference="protein motif:TFAM:TIGR03358"
/note="TIGRFAM: type VI secretion protein, VC_A0107
family;
PFAM: conserved hypothetical protein;
KEGG: pmy:Pmen_0090 hypothetical protein"
/codon_start=1
/transl_table=11
/product="type VI secretion protein"
/protein_id="YP_002891410.1"
/db_xref="GI:237806970"
/db_xref="InterPro:IPR008312"
/db_xref="GeneID:7885707"
/translation="MSGKEGSVAPKERINVTFKPSTGEGMEELELPLKLMMIGDYTLT
KDDRKLEDRKAININKNNFNEVLENQNIGLDLQVPNRLSNHDVNEEIALSLRFKTLKD
FDPANLVQQVPEMKALMELRDALVALKGPLGNVPSFRKAIEEVLTNQDAREKVLAELG
MVEK"
misc_feature 213703..214170
/locus_tag="Tola_0194"
/note="Protein of unknown function (DUF770); Region:
DUF770; pfam05591"
/db_xref="CDD:203282"
gene 214204..215679
/locus_tag="Tola_0195"
/db_xref="GeneID:7885708"
CDS 214204..215679
/locus_tag="Tola_0195"
/inference="protein motif:TFAM:TIGR03355"
/note="TIGRFAM: type VI secretion protein, EvpB/VC_A0108
family;
PFAM: protein of unknown function DUF877;
KEGG: pmy:Pmen_0091 hypothetical protein"
/codon_start=1
/transl_table=11
/product="type VI secretion protein EvpB"
/protein_id="YP_002891411.1"
/db_xref="GI:237806971"
/db_xref="InterPro:IPR010269"
/db_xref="GeneID:7885708"
/translation="MKQRLGEQVTATLEPVNILDRIIAETKLTPQDEAYDIAKRGVSA
FIEELLKSKSSAEPVKKALVDKMIAAIDEKLSRQVDEILHNTKFQQMESAWCGLKMVV
DRTDFDQNIKLEILNVSKEDLLDDFEDASDITHSGLYKHIYTSEYGQFGGQPVGAIIA
NYAFGPSAPDVKILQYASSVAAMSHAPFISAAGPKFFGLESYEGLPNIKDLNDHFDGP
QYTKWQSFRETEDSRYVGLTLPRFLLRQPYSPEDNPVKTFVYQEDVSATHEHYLWGNS
AYAFATRLTESFAKYRWCPNIIGPRSGGAVNDLPLHHFESMGEIETKIPTEVLVSDRR
EYQLAEQGFISLTMRKGSDNAAFFSANSAQKPKFFGNSEEGKKAELNYKLGTQLPYMF
VICRLAHYIKVLQREQIGSWKERTQLETELNKWLRQYIADQENPPAEVRSRRPLRAAQ
ITVEDVDGEPGWYRVGIAVRPHFKFMGADFTLSLVGKLDKE"
misc_feature 214246..215670
/locus_tag="Tola_0195"
/note="type VI secretion protein, EvpB/VC_A0108 family;
Region: VI_chp_2; TIGR03355"
/db_xref="CDD:163229"
misc_feature 214393..215670
/locus_tag="Tola_0195"
/note="Protein of unknown function (DUF877); Region:
DUF877; pfam05943"
/db_xref="CDD:191407"
gene 215682..216095
/locus_tag="Tola_0196"
/db_xref="GeneID:7885709"
CDS 215682..216095
/locus_tag="Tola_0196"
/inference="protein motif:TFAM:TIGR03357"
/note="TIGRFAM: type VI secretion system lysozyme-related
protein;
PFAM: GPW/gp25 family protein;
KEGG: pen:PSEEN0525 hypothetical protein"
/codon_start=1
/transl_table=11
/product="type VI secretion system lysozyme-like protein"
/protein_id="YP_002891412.1"
/db_xref="GI:237806972"
/db_xref="InterPro:IPR007048"
/db_xref="InterPro:IPR017737"
/db_xref="GeneID:7885709"
/translation="MGYGSLFERLNGETVGRNSQLTEESLAASILNHLNKLLQTRQGT
VLCLPDYGLPDLNDGNASIYDSINRIRRHVGWIISRYEPRLSGIRVIYVPDAGSLLAL
RFRITGTMQKDGLVAPLTVGVDVYSGSELRLQRVV"
misc_feature 215691..216080
/locus_tag="Tola_0196"
/note="type VI secretion system lysozyme-like protein;
Region: VI_zyme; TIGR03357"
/db_xref="CDD:163231"
gene 216085..217842
/locus_tag="Tola_0197"
/db_xref="GeneID:7885710"
CDS 216085..217842
/locus_tag="Tola_0197"
/inference="protein motif:TFAM:TIGR03359"
/note="TIGRFAM: type VI secretion protein, VC_A0110
family;
PFAM: protein of unknown function DUF879;
KEGG: pmy:Pmen_0095 hypothetical protein"
/codon_start=1
/transl_table=11
/product="type VI secretion protein"
/protein_id="YP_002891413.1"
/db_xref="GI:237806973"
/db_xref="InterPro:IPR010272"
/db_xref="GeneID:7885710"
/translation="MSFNQYFQSELLALKELGQDFSRKNPALAPFLSQDGRDPDVERL
FEGFAFISGRLRQKLDDELPELSHSLLQLLWPNYLRPVPSFGMLEFKPVHQANQIPVV
PKGACMSSTAGKSANGQFQTCFDTALQPLQIEGVSFYPQGDAGVIQLELTPIADVSIA
DLFLSSLRLHFAGERAVTTSLYFSLLQLTQRVLLLLKDEQGQVLEQLTLEHSQIRPVG
FSKDERLLDYPLNCFDGYVLLQEYFSFPQKFLFVEVGGLSMLQFCKQQAQARSIELQF
ELSRTPMMHFQPKKENVHLYCSPVANVFNTHAIPIRYDQRQTEYKVIPADIGLDTSSI
ISINTVTGWLPGNIGMREFNQFESFRNHDCDDGNAYFRARYKPGIGNHGTETWLSFNN
TQAGEQMAETISVDLTCCDHSLAHHINVGDITVAGDGMPQFASFRNITPLSATYPPPM
SGDILWRIISNMSLNYQSLADVQALRVVLETYDFPGFYDDKKARRTRKMLDGIKRITQ
KAGDRIWQGLPVRGMRTEIEMDVSHFLCEGDMFLFAAILNEFFCSFTSLNTFHQLQVK
SSDGVIYSWAPRMGQQVLS"
misc_feature 216085..217836
/locus_tag="Tola_0197"
/note="Type VI protein secretion system component VasA
[Intracellular trafficking, secretion, and vesicular
transport]; Region: COG3519"
/db_xref="CDD:33322"
misc_feature 216091..217836
/locus_tag="Tola_0197"
/note="Bacterial protein of unknown function (DUF879);
Region: DUF879; pfam05947"
/db_xref="CDD:203356"
gene 217806..218825
/locus_tag="Tola_0198"
/db_xref="GeneID:7885711"
CDS 217806..218825
/locus_tag="Tola_0198"
/inference="protein motif:TFAM:TIGR03347"
/note="TIGRFAM: type VI secretion protein, VC_A0111
family;
PFAM: protein of unknown function DUF1305;
KEGG: pag:PLES_36661 hypothetical protein"
/codon_start=1
/transl_table=11
/product="type VI secretion protein"
/protein_id="YP_002891414.1"
/db_xref="GI:237806974"
/db_xref="InterPro:IPR010732"
/db_xref="GeneID:7885711"
/translation="MGTAYGSASTELMAGPFAGSVRRYNLFQAIDLSCKWLSQVNQID
EEQAYGLIAFAGNSSLAFPKSEIEEVFFYLEQGVVRAKFIINSINLFGAGSPLPAHYY
EPIAYDDEQGRVVRDFIDLFNQRLQALIYPIWKKYRYYMQFEPAAKDAFSERMFALIG
LGYQELRRSSHIEWPRLLPYLGLLSIKVQSAAVLESVLRYYFNHKALFIEQCVVRRVT
IPAEQWNQLGLVNHRLGQSLVLGESILDRHTTFRIHIRELDWDTFHFFLPIGEGYAVL
RELVGFILREPLEYDIRLSMPDRSSQPLMLSGNNKCRLGWTTWFGLEADEGTITVAGN
INDNN"
misc_feature 217866..218768
/locus_tag="Tola_0198"
/note="type VI secretion protein, VC_A0111 family; Region:
VI_chp_1; TIGR03347"
/db_xref="CDD:163224"
gene 218812..221421
/locus_tag="Tola_0199"
/db_xref="GeneID:7885712"
CDS 218812..221421
/locus_tag="Tola_0199"
/inference="protein motif:TFAM:TIGR03345"
/note="KEGG: pau:PA14_42980 putative ClpA/B-type protease;
TIGRFAM: type VI secretion ATPase, ClpV1 family;
PFAM: ATPase AAA-2 domain protein; AAA ATPase central
domain protein; Clp domain protein; ATPase associated with
various cellular activities AAA_5;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="type VI secretion ATPase, ClpV1 family"
/protein_id="YP_002891415.1"
/db_xref="GI:237806975"
/db_xref="InterPro:IPR001270"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR003959"
/db_xref="InterPro:IPR004176"
/db_xref="InterPro:IPR011704"
/db_xref="InterPro:IPR013093"
/db_xref="InterPro:IPR017729"
/db_xref="GeneID:7885712"
/translation="MITIKLDELISALAPAEKQALEQAANYCVARAGSEILVEDYLLA
LLDGSDSFLNKVLLQFSLSADTLRTILLESVGYQKTESRNPVFSTLLVNWLEEAFLIT
KLQLQQSSIACLALLLAIQDRPEKYARTRYGQFFSDIPREKLMALMDGLQAEVLSAMS
VSGAGSALQQFTKSYTQLARDGKLDPVLCRDEEIRQIVDILSRRRKNNPILVGEAGVG
KTAVVEGLAQHVIAGLVPPALTGIELLELDMGLLQAGASVKGEFERRLKAVIDEVNAS
PKPIVLFIDEAHTLIGAGGQAGGGDAANLLKPALARGTLRTLAATTWSEYKKYFEKDP
ALARRFQPVQVLEPTITQATTILRGLVSRYEVAHDVYLRDDAVVTAAELSARYLSGRQ
LPDKAIDLLDTACARVKNSQHATPIRLQAIATSLAEKQRLQTALLRDQQHGLPVEPGQ
LAALERQIPQLEQEHAELSAHWQEQKTLVAQLVASRNPEVSSLLSAADNQSEITAELV
DVDVEAPETVLAALAELQQSQGILIHHEVTPQVVAEVISSWTAIPVENLIEAPSARVV
EFADRLRARIRGQAHAVSLIERAVKATAAGLGNPLAPTGVFLLAGPSGVGKTETAVAV
AELLYGGERFLTTINMSEFQEKHSLSRLIGSPPGYVGYGEGGILTEAVRQRPYSVILL
DEVEKADPDILNLFYQIFDKGIANDGEGRVINFRNTLIFMTSNLASAEISSLAAGETP
VMTDSITETIRPVLAKHFKPALLARMNIIPYLPIANDVMHELVLLRLQKLSQRIASRG
IALTFDAAVVTAIAESCTRTDTGARNIDFLVNNYLLPAISDRILKALTQQENIRGIRV
VQDEYGNFELIIG"
misc_feature 218848..221379
/locus_tag="Tola_0199"
/note="type VI secretion ATPase, ClpV1 family; Region:
VI_ClpV1; TIGR03345"
/db_xref="CDD:163222"
misc_feature 219379..>219681
/locus_tag="Tola_0199"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 219448..219471
/locus_tag="Tola_0199"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(219451..219474,219664..219666)
/locus_tag="Tola_0199"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 219652..219669
/locus_tag="Tola_0199"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 220630..221016
/locus_tag="Tola_0199"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 220642..220665
/locus_tag="Tola_0199"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(220645..220668,220858..220860,220984..220986)
/locus_tag="Tola_0199"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 220846..220863
/locus_tag="Tola_0199"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 221140..221340
/locus_tag="Tola_0199"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; pfam10431"
/db_xref="CDD:204486"
gene 221430..222434
/locus_tag="Tola_0200"
/db_xref="GeneID:7885713"
CDS 221430..222434
/locus_tag="Tola_0200"
/inference="protein motif:PFAM:PF00158"
/note="PFAM: sigma-54 factor interaction domain-containing
protein; helix-turn-helix Fis-type; ATPase associated with
various cellular activities AAA_5;
SMART: AAA ATPase;
KEGG: pmy:Pmen_0098 fis family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="Fis family sigma-54 specific transcriptional
regulator"
/protein_id="YP_002891416.1"
/db_xref="GI:237806976"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR002197"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011704"
/db_xref="GeneID:7885713"
/translation="MTITNNKAAQRQEPDNPYALIGSSQLMKQVYRLISKVLHSEANI
LLTGETGTGKELVARAIHEYGHRRTQPFVVQNCASLPDGLLESELFGYKKGAFTGADR
NHLGMFDAAHNGILFLDEIGDLPLILQAKLLRVLQEQEIRPLGDTQYHKINVRVIAAT
HRNLEEMVALGEFRSDLYYRLAHFPIELPPLREREGDIKKLAYSFLREIAMRERRGEM
RLSAAAEKALQNYDFPGNVRELKSMIERAILLADDTDTIECHHFPNIQGVISPESSPV
HGGMLKELVDHYERQVLIESLKKHHGNQKNTAIALGVARRTLLYKLSKHNINSRNWRA
"
misc_feature 221487..222404
/locus_tag="Tola_0200"
/note="psp operon transcriptional activator PspF; Region:
phageshock_pspF; TIGR02974"
/db_xref="CDD:163093"
misc_feature 221508..221972
/locus_tag="Tola_0200"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 221571..221594
/locus_tag="Tola_0200"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(221574..221597,221784..221786,221910..221912)
/locus_tag="Tola_0200"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 221772..221789
/locus_tag="Tola_0200"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 221967..221969
/locus_tag="Tola_0200"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 222294..222404
/locus_tag="Tola_0200"
/note="Bacterial regulatory protein, Fis family; Region:
HTH_8; pfam02954"
/db_xref="CDD:202485"
gene 222434..222571
/locus_tag="Tola_0201"
/db_xref="GeneID:7885714"
CDS 222434..222571
/locus_tag="Tola_0201"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891417.1"
/db_xref="GI:237806977"
/db_xref="GeneID:7885714"
/translation="MRLVISFCLVCLLVTACSKREGYRYLGDTAPNQAITQQNQQDEQ
E"
gene 222575..223870
/locus_tag="Tola_0202"
/db_xref="GeneID:7885715"
CDS 222575..223870
/locus_tag="Tola_0202"
/inference="protein motif:TFAM:TIGR03354"
/note="TIGRFAM: type VI secretion system FHA domain
protein;
PFAM: Forkhead-associated protein;
KEGG: pst:PSPTO_5422 FHA domain-containing protein"
/codon_start=1
/transl_table=11
/product="FHA domain-containing protein"
/protein_id="YP_002891418.1"
/db_xref="GI:237806978"
/db_xref="InterPro:IPR000253"
/db_xref="InterPro:IPR017735"
/db_xref="GeneID:7885715"
/translation="MPLILDLVNAEGQSSAQKSSVTFRNAGGTIGRADSATWMLADRS
RHISGVHAEISYEEGVYYLTDRSTNGIYDVAKNARLQKNEDYPIAHGDRFRMGSFVFK
ARVLQDADHFEHQIMGEPSSVSALIPDDEFLDTDPLAMLNAPEIPSEDFELGEFSVRR
DDNFALNESFDDLDEPFLSPTLASVPLAKEEQAMLAALDISNPIPVRPVPLKPEKTGS
PVAGSPASAHAPDSAQRVLQVLGSAMDFDFGKLTQDELDSVLQNLGVLTKHAVQGLQQ
VLRTRADIKNKLRLGSTMVQESGNNPLKLPGNYTQTLNCMLLGQIGYLSGPQAVRQAL
KDIQAHQVSSFAASRTILDSVFEQFSPTQLVYRFETAGKPGKWGSKDAYYWQQYQLHH
QKMSGDQEWRQSQFIKDYARVYEEQAQYINAAWSELDAR"
misc_feature 222581..223825
/locus_tag="Tola_0202"
/note="type VI secretion system FHA domain protein;
Region: VI_FHA; TIGR03354"
/db_xref="CDD:211812"
misc_feature <222659..222889
/locus_tag="Tola_0202"
/note="Forkhead associated domain (FHA); found in
eukaryotic and prokaryotic proteins. Putative nuclear
signalling domain. FHA domains may bind phosphothreonine,
phosphoserine and sometimes phosphotyrosine. In
eukaryotes, many FHA domain-containing proteins...;
Region: FHA; cd00060"
/db_xref="CDD:28942"
misc_feature order(222668..222670,222704..222706,222716..222721,
222776..222784)
/locus_tag="Tola_0202"
/note="phosphopeptide binding site; other site"
/db_xref="CDD:28942"
gene 223876..224427
/locus_tag="Tola_0203"
/db_xref="GeneID:7885716"
CDS 223876..224427
/locus_tag="Tola_0203"
/inference="protein motif:TFAM:TIGR03352"
/note="TIGRFAM: type VI secretion lipoprotein, VC_A0113
family;
KEGG: vsa:VSAL_I1116 putative type VI secretion protein
VasD"
/codon_start=1
/transl_table=11
/product="type VI secretion lipoprotein"
/protein_id="YP_002891419.1"
/db_xref="GI:237806979"
/db_xref="InterPro:IPR017734"
/db_xref="GeneID:7885716"
/translation="MKNKFFMAACGVFLSACSSTPDPTLLDLTMTADADLNPDLTSRP
SPMIVKLVELKSHTAFGNADYFALAGNTKNTLGPDYVAEEVLPVRPGESKTLKLRLHP
GSRFIGVIAEYRALDKAVWRYVIQPEKEDFSAIRLALTRDAIRPLTPAQYEDKQGSAT
ALNVSQIEQKTTGVASNSAVNLQ"
misc_feature 223984..224307
/locus_tag="Tola_0203"
/note="Type VI secretion lipoprotein; Region: T6SS-SciN;
pfam12790"
/db_xref="CDD:205072"
gene 224501..225844
/locus_tag="Tola_0204"
/db_xref="GeneID:7885717"
CDS 224501..225844
/locus_tag="Tola_0204"
/inference="protein motif:TFAM:TIGR03353"
/note="TIGRFAM: type VI secretion protein, VC_A0114
family;
PFAM: protein of unknown function DUF876;
KEGG: pag:PLES_36601 hypothetical protein"
/codon_start=1
/transl_table=11
/product="type VI secretion protein"
/protein_id="YP_002891420.1"
/db_xref="GI:237806980"
/db_xref="InterPro:IPR010263"
/db_xref="GeneID:7885717"
/translation="MERIVWREGMLLRPQHLQQQDHYYQHQFRELLQMTSPCNWGFFE
AEIDKQYLMMGKVVVSRAAGILPDGALFRIGENDHPAVEVKKDLYDAVVYLALPLVTG
NAVENRLAEEHQVVTPFVSFEKLAYDTNYGERNSCAVLCCRHDFRLLVEPAGGNNELP
DEASWIKMPLCRISDVSADGFVTLDEHFQPSFLHFGECAPYQGYLRELVNLLAHRGDT
LAGRIRNTGRFGTSEVGDFLMLALINRNETRLRHLMQFRQIHPERVFMEMVSLHSELA
SFNGDSRRPLNELSYIHTAQYACFHRVMNELRLHLSQVIEQHAVELPLQSRKYGILVS
PLQDRTLLDNSQFVLTAQADCEQEQLRNRLPAQMKVGPVEQIRQMVNLHLPGINLRPL
AAAPRQLPFHARHIYFSLELDAAMRAQLESSGGFALHVAGEFPELQLSLWAIRNN"
misc_feature 224507..225835
/locus_tag="Tola_0204"
/note="type VI secretion protein, VC_A0114 family; Region:
VI_chp_4; TIGR03353"
/db_xref="CDD:132396"
misc_feature 224585..225835
/locus_tag="Tola_0204"
/note="Bacterial protein of unknown function (DUF876);
Region: DUF876; pfam05936"
/db_xref="CDD:203353"
gene 225846..226712
/locus_tag="Tola_0205"
/db_xref="GeneID:7885718"
CDS 225846..226712
/locus_tag="Tola_0205"
/inference="protein motif:TFAM:TIGR03349"
/note="TIGRFAM: type IV / VI secretion system protein,
DotU family;
KEGG: pau:PA14_42910 hypothetical protein"
/codon_start=1
/transl_table=11
/product="DotU family type IV / VI secretion system
protein"
/protein_id="YP_002891421.1"
/db_xref="GI:237806981"
/db_xref="InterPro:IPR017732"
/db_xref="GeneID:7885718"
/translation="MAMANSEHTVFLGHRETDDEEIIVPLPKTKSNAAVRYQQLDDRM
IYAARLRDEKMLNVGTNPLLAAASPLFQAIADVSSEGYAAPAGLKEELVKRIKDFEFM
ALSQGCDNTEIIASRYVLCTALDEAITTKPWSTRLEWTKNSLLIIFHNEANGGEKLFQ
LLDKLSRNPTRHINVLELIYVFLSLGYEGKYRVLQRGLSELDAIRNSLYRQIRMIRGE
QQKDLAINWQPVVSGRQKLPVYIPVWLIVVMALCCLGLVYAGFDYVLEQQTHVITNMY
QDAGQKQGHNAQ"
misc_feature 226026..226640
/locus_tag="Tola_0205"
/note="Uncharacterized protein conserved in bacteria
(DUF2077); Region: DUF2077; pfam09850"
/db_xref="CDD:192403"
gene 226709..230230
/locus_tag="Tola_0206"
/db_xref="GeneID:7885719"
CDS 226709..230230
/locus_tag="Tola_0206"
/inference="protein motif:TFAM:TIGR03348"
/note="TIGRFAM: type VI secretion protein IcmF;
PFAM: ImcF domain protein; protein of unknown function
DUF1215;
KEGG: vfm:VFMJ11_1075 type VI secretion protein IcmF"
/codon_start=1
/transl_table=11
/product="type VI secretion protein IcmF"
/protein_id="YP_002891422.1"
/db_xref="GI:237806982"
/db_xref="InterPro:IPR009612"
/db_xref="InterPro:IPR010623"
/db_xref="InterPro:IPR017731"
/db_xref="GeneID:7885719"
/translation="MKNLFRRLIHTLKQTWCWTLLLTFVGGALVFFIGPLIAIAGRTI
LAALETRIVVMILLLAFWLVALLVAQPLRKRRRRRMLNAEQLKTELENDEQIDDELHI
LKERLNNAIHVIKHASFYGKRRASRYELPWYLLMGDQNSGKTALLENSGVDFPLNKTD
ERMTRDIGHTRYCDWYFANQAVMIDAGGRYMVQEENSVAERVWPQFLQMLYQKRRRRP
LNGIVFTLDVGQLLNQDEGALEQYARTVRGRMQQIQSQLSSDIPVYLVLSKGDYLEGF
NAFFEHLTKEEREQIVGVTFKENSDGTQVDVLRTEFEELIRRINDMVLSRIHHERDVK
RRGDIIRFPLQFAAIVEPLALFVEIAFGRNRYHLPTRLRGIYLTSAPHIDVNQPLNET
TVSIGRNIGLQRDLLPFTSPNRGFFIRRVLEDIVFNEGDLATIDTRYDRGMRWTNRFA
CLCAFVVVLGIGSTWMRVFHDNSSRQQILRDLHMKVEHEQQKIPPVSDTPAVLPVLST
LRQATEIYPQSNRADWINKLSLHQGNRINPVVDKAYEQQLRQLMLPKIKLLLEEQLRA
GTDDRDYLLKALRAYLMLHDKPHLDNNYLRQWISLSWADLYSGQATLQKSLLDHFDKL
LSIGFEPLDIDYRLVEDTQHLLKQESPARLVYRMIKEDPLAVTLPAVHFDDVQGLQYH
SFTGGDYGIPGLYTQRGYQDVFLRKGLALIKDIMRDNWVLGTSDDMSEREFQKIYADV
ENLYFQDYISYWNEAIGQLQLKAMSDITDASNTLNNLNNNQPVQRVLALIRDNTLFKL
SESIADEAENAVLKKTGKGKLAKALVAQAGSALEEAQNKGPKQALALKFAPFHQLVQE
NGTPNPALQDAFTALNAIQSMFTALAHAPDQDAAAYQLASNRMSGQPDELTRIRIAAD
RLPEPIRTWFIDIGDQTWRMTLDKAADYVQMQYRTDVLTVYDNTIKGRYPFADSDKDV
TLGDFNEFFKKDGVLDQFVSGPLKPFFLVRGGELLSRSIDGQSIRMSRSSLQQFQRAA
QIQKAFFTEAGGQAGMNFKVQPLELDPGALKSEFAYSGQSLIYQHGPIVPIDLRWPVA
QGNGTANISMQDLNGRETLLTKQSGAWSLFRLLDHCVVRTHDGEDQLVVIIDNQGVQA
QYLFSGDHSPNPLKRTLLTGFALSDRL"
misc_feature 226760..230221
/locus_tag="Tola_0206"
/note="type VI secretion protein IcmF; Region: VI_IcmF;
TIGR03348"
/db_xref="CDD:163225"
misc_feature 227288..228070
/locus_tag="Tola_0206"
/note="ImcF-related N-terminal domain; Region:
ImcF-related_N; pfam14331"
/db_xref="CDD:206499"
misc_feature 228212..229090
/locus_tag="Tola_0206"
/note="Intracellular multiplication and human
macrophage-killing; Region: IcmF-related; pfam06761"
/db_xref="CDD:148393"
misc_feature 229433..229804
/locus_tag="Tola_0206"
/note="Protein of unknown function (DUF1215); Region:
DUF1215; pfam06744"
/db_xref="CDD:148380"
gene 230238..230972
/locus_tag="Tola_0207"
/db_xref="GeneID:7885720"
CDS 230238..230972
/locus_tag="Tola_0207"
/EC_number="3.1.3.16"
/inference="protein motif:PRIAM:3.1.3.16"
/note="KEGG: pfo:Pfl01_5576 protein serine/threonine
phosphatase;
PFAM: Protein phosphatase 2C-like; Stage II sporulation E
family protein;
SMART: protein phosphatase 2C domain protein"
/codon_start=1
/transl_table=11
/product="protein serine/threonine phosphatase"
/protein_id="YP_002891423.1"
/db_xref="GI:237806983"
/db_xref="InterPro:IPR001932"
/db_xref="InterPro:IPR010822"
/db_xref="InterPro:IPR014045"
/db_xref="GeneID:7885720"
/translation="MLRRSSGKCWSSAAATSAGNVRTDNEDTYLIHAENGIWAVADGM
GGHQLGGLASQLVAESLLDIPAGGDLDRRLEHVATALQWVNFHLSCERTLVDPQQIMG
STVMTLVAQSGRAACIWAGDCRCYLLRCGVLFQISEDHSLVQQWVDAKRLTAEEAIQH
PHSNIVTRAIGVSRELVLESVEFELYSGDMLLLCTDGLYRGLSAGIIIRCLSFAEPEK
AVQALMQHALAGAAKDNVTAVVVRNN"
misc_feature 230271..230963
/locus_tag="Tola_0207"
/note="Serine/threonine phosphatases, family 2C, catalytic
domain; The protein architecture and deduced catalytic
mechanism of PP2C phosphatases are similar to the PP1,
PP2A, PP2B family of protein Ser/Thr phosphatases, with
which PP2C shares no sequence...; Region: PP2Cc; cd00143"
/db_xref="CDD:29062"
misc_feature 230280..230945
/locus_tag="Tola_0207"
/note="Protein phosphatase 2C; Region: PP2C; pfam00481"
/db_xref="CDD:201254"
misc_feature order(230301..230303,230313..230318,230361..230369,
230823..230825,230937..230939)
/locus_tag="Tola_0207"
/note="active site"
/db_xref="CDD:29062"
gene 231013..231915
/locus_tag="Tola_0208"
/db_xref="GeneID:7885721"
CDS 231013..231915
/locus_tag="Tola_0208"
/inference="protein motif:PFAM:PF00069"
/note="PFAM: Serine/threonine protein kinase-related;
tyrosine protein kinase; protein of unknown function RIO1;
SMART: serine/threonine protein kinase; tyrosine protein
kinase;
KEGG: vfm:VFMJ11_1073 serine/threonine protein kinase"
/codon_start=1
/transl_table=11
/product="serine/threonine protein kinase"
/protein_id="YP_002891424.1"
/db_xref="GI:237806984"
/db_xref="InterPro:IPR000687"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR001245"
/db_xref="InterPro:IPR002290"
/db_xref="InterPro:IPR008271"
/db_xref="InterPro:IPR017441"
/db_xref="InterPro:IPR017442"
/db_xref="GeneID:7885721"
/translation="MNIALLSEVTTDVTTPQLSAGYSMLAGRYKLGNILGVGGMGVVY
RGVDTMLQTFGAASHFIAVKMTSTALADHVHADKLLFTEYELGSCLKHPNLVAIRHFD
VCRQQQKAFLVMDWIEGLQLEELLYRQRIPAVVALKLARQLVNGVRYCHEQGVVHGDI
KPTNIIISPDNHLTLFDFGISRWLSRPAANHREVIRACSCRYAAPELFDVHIPSIATD
VFSVCCVIYRLFSGEHPFKDTTDEAAARNDVITPVFHRRHALDKALQQGLMWSHHKRS
CNLDWLHKVLSGLTENDFKNNWFI"
misc_feature 231187..231699
/locus_tag="Tola_0208"
/note="Catalytic domain of Protein Kinases; Region: PKc;
cd00180"
/db_xref="CDD:173623"
misc_feature order(231196..231198,231202..231204,231298..231300,
231352..231363,231373..231375,231379..231381,
231487..231489,231493..231495,231499..231504,
231508..231510,231541..231543,231550..231552,
231604..231615)
/locus_tag="Tola_0208"
/note="active site"
/db_xref="CDD:173623"
misc_feature order(231196..231198,231202..231204,231298..231300,
231352..231363,231373..231375,231487..231489,
231493..231495,231499..231504,231508..231510,
231541..231543)
/locus_tag="Tola_0208"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:173623"
misc_feature order(231373..231375,231379..231381,231487..231489,
231493..231495,231499..231501,231550..231552,
231604..231615)
/locus_tag="Tola_0208"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173623"
misc_feature order(231538..231558,231604..231615)
/locus_tag="Tola_0208"
/note="activation loop (A-loop); other site"
/db_xref="CDD:173623"
gene 231934..234045
/locus_tag="Tola_0209"
/db_xref="GeneID:7885722"
CDS 231934..234045
/locus_tag="Tola_0209"
/inference="protein motif:TFAM:TIGR03361"
/note="TIGRFAM: type VI secretion system Vgr family
protein; Rhs element Vgr protein;
PFAM: Rhs element Vgr protein;
KEGG: pmy:Pmen_0820 rhs element Vgr protein"
/codon_start=1
/transl_table=11
/product="ImpA family type VI secretion-associated
protein"
/protein_id="YP_002891425.1"
/db_xref="GI:237806985"
/db_xref="InterPro:IPR006533"
/db_xref="InterPro:IPR017847"
/db_xref="GeneID:7885722"
/translation="MFVSDSPDDALSSLGSSVRGLFSANESRFFLTLSGHDEDVQVLR
FTAQESLNCPWELDITLVSEAENISPEKMVGSAATLTLSGCAGRSYYHGQVWQFRRQT
QGKRLTQYQLVMRPSLSWLGLGRNQRIFQQKSVPDIIRLLLQEQHVASDQVQWKLSGT
YTARDYCVQYGESDLQFITRLLGEEGIHYHFAHDEGGSKLIFADHPSGWSTGLAAVPY
KPGTGQAADEDTLQSFQVRHAVSVNMISRRYFDLHKPLQLTDAEQKTSPAAGSPSLKR
NDSAWRDHLNHYDYRSAEQQSISSAQQIAERHLESLQRTRITAQGRGNLSQLRTGWLL
PIRGHGRAEFNSQWLLTEVSLSGEQPQVLEEFSGGQSSLSCQFSAVPWDTPWRPDFAP
EKPLLCGIQTACVTGPAGEEIHTDELGRIKVQFHWDREGKEDERTSCWIRVMHDWAGN
GYGVVRLPRIGQEVQVSFEDGNPDKPLITGCLHNGEQQTAWELPVHMTRSGIRTCSSP
GGGGSNELRFEDKKGKEELRWQAEKDWDAKILSCSHTQINGAHESAIGGNDYREIEGE
QHITLEADTQKEVGLNQHCTIHGSQEQHIEQKCLIQAGQNVVWQSKNQAIYHAGTELT
LQAGGSFIKLDPCGITLSGPMVTMNQGGSALSAGSESAALPHKPAGAHSAGIGKVPQA
KAPEKVIKVAPEKDYRIVYSD"
misc_feature 232018..233592
/locus_tag="Tola_0209"
/note="type VI secretion system Vgr family protein;
Region: VI_Rhs_Vgr; TIGR03361"
/db_xref="CDD:200267"
misc_feature 232075..233016
/locus_tag="Tola_0209"
/note="Phage late control gene D protein (GPD); Region:
Phage_GPD; pfam05954"
/db_xref="CDD:203357"
misc_feature 233128..233412
/locus_tag="Tola_0209"
/note="Phage-related baseplate assembly protein; Region:
Phage_base_V; pfam04717"
/db_xref="CDD:203075"
gene 234171..235781
/locus_tag="Tola_0210"
/db_xref="GeneID:7885723"
CDS 234171..235781
/locus_tag="Tola_0210"
/EC_number="6.3.2.2"
/inference="protein motif:TFAM:TIGR01434"
/note="KEGG: asa:ASA_0717 glutamate-cysteine ligase;
TIGRFAM: glutamate/cysteine ligase;
PFAM: glutamate--cysteine ligase"
/codon_start=1
/transl_table=11
/product="glutamate/cysteine ligase"
/protein_id="YP_002891426.1"
/db_xref="GI:237806986"
/db_xref="InterPro:IPR006334"
/db_xref="InterPro:IPR007370"
/db_xref="GeneID:7885723"
/translation="MSLSPSLSEIIEQLSTPERVFAVRGIRRGIERESLRITPEGRLS
PLDHPRQLGAALTNANITTDYSESLMEFITPVSDSLDVLLAQLGDIHRFTQQNIGDER
LWPLSMPCFIGGEESIRLAQYGRSNTGRMKTLYRQGLHHRYGSMMQVIAGVHFNFSMP
DSFWNEWLSLQQPECCQCKLISDSYMGLIRNVYRFGWLIPYLFGASPALCSSFLQGRD
TGLPFERVGKGTLYLPYATSLRLSDLGYTNKSQASLNISHNNLPDYLTSVRRALDTKD
EAFAAMGIKVGDEYRQLNDHVLQLENELYAPIRPKRTPRSGERAVVALERRGIDYIEL
RTLDINPFTPFGVELQQLRFLDLFLVWCLLRPSPVLDAAEIERNRHNMSHVALEGRRP
GLQLMTAEGELPLRVWGEQLFDELQLVAQLLDRANGRIHYQLALQAQRDKLIDPDKTL
SAQVLTHLLQHDLDNAEFGRQQAELFHQQLQHAPLQYWEANYFTDEAQASLLKQAELE
ADDHQSFDDFLRQYLQLPQAGYAPCGVE"
misc_feature 234180..235736
/locus_tag="Tola_0210"
/note="glutamate--cysteine ligase; Provisional; Region:
PRK02107"
/db_xref="CDD:179369"
gene complement(235816..236493)
/locus_tag="Tola_0211"
/db_xref="GeneID:7885724"
CDS complement(235816..236493)
/locus_tag="Tola_0211"
/inference="protein motif:PFAM:PF00043"
/note="PFAM: Glutathione S-transferase domain;
KEGG: bid:Bind_2356 glutathione S-transferase
domain-containing protein"
/codon_start=1
/transl_table=11
/product="glutathione S-transferase"
/protein_id="YP_002891427.1"
/db_xref="GI:237806987"
/db_xref="InterPro:IPR004045"
/db_xref="InterPro:IPR004046"
/db_xref="GeneID:7885724"
/translation="MYTLFYAPTPNGKKVTLMLEALNVPYQVIPINIRKGDQFLPSFL
AISPNNRIPALIDHDTGIEIFESGAILTYLAEKHGQFLPANGSDRYAVLQWLHWQIGG
LGPMAGQNHHFNHYAAEIVPYGIKRYTEETARLYGVLNKQLANKTYVASDEYSIADMA
IYPWITLYEHQKQDIWQFPHIARYLETMAARDDVQRGMHKYADFDWETSLTEAQLREL
LEQHLQG"
misc_feature complement(235921..236493)
/locus_tag="Tola_0211"
/note="GSH-dependent disulfide bond oxidoreductase;
Provisional; Region: PRK13972"
/db_xref="CDD:172475"
misc_feature complement(236254..236493)
/locus_tag="Tola_0211"
/note="GST_N family, Ure2p-like subfamily; composed of the
Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is
a regulator for nitrogen catabolism in yeast. It represses
the expression of several gene products involved in the
use of poor nitrogen sources...; Region: GST_N_Ure2p_like;
cd03048"
/db_xref="CDD:48597"
misc_feature complement(order(236278..236280,236431..236436,
236443..236445,236452..236454,236461..236466))
/locus_tag="Tola_0211"
/note="C-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:48597"
misc_feature complement(order(236293..236298,236335..236343,
236461..236463))
/locus_tag="Tola_0211"
/note="GSH binding site (G-site) [chemical binding]; other
site"
/db_xref="CDD:48597"
misc_feature complement(order(236287..236289,236296..236301,
236305..236307,236341..236343,236347..236352))
/locus_tag="Tola_0211"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48597"
misc_feature complement(235903..236232)
/locus_tag="Tola_0211"
/note="C-terminal, alpha helical domain of Escherichia
coli YfcG Glutathione S-transferases and related
uncharacterized proteins; Region: GST_C_YfcG_like;
cd10291"
/db_xref="CDD:198324"
misc_feature complement(order(235903..235908,235912..235917,
235921..235923,236002..236010,236014..236019,
236026..236034,236197..236199,236206..236208,
236215..236220,236227..236229))
/locus_tag="Tola_0211"
/note="N-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:198324"
misc_feature complement(order(236080..236082,236092..236094,
236110..236115,236125..236127,236131..236133,
236155..236160,236167..236169,236191..236196,
236200..236205,236209..236214,236221..236226))
/locus_tag="Tola_0211"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:198324"
misc_feature complement(order(236002..236004,236158..236160,
236170..236172,236179..236184))
/locus_tag="Tola_0211"
/note="active site"
/db_xref="CDD:198324"
gene 236831..238168
/locus_tag="Tola_0212"
/db_xref="GeneID:7885725"
CDS 236831..238168
/locus_tag="Tola_0212"
/inference="protein motif:PFAM:PF03390"
/note="PFAM: Citrate carrier protein;
KEGG: bcb:BCB4264_A0616 citrate cation symporter family"
/codon_start=1
/transl_table=11
/product="citrate carrier protein"
/protein_id="YP_002891428.1"
/db_xref="GI:237806988"
/db_xref="InterPro:IPR004679"
/db_xref="GeneID:7885725"
/translation="MSETNPSSVLEGSGQIREPGVFGKLMDIKVGVISLPVYLVLSFI
VLMAAKTGNLPNDLIGGFAVIMVLGLILSELGMKLPILKNIGGPAILALMVPSFLVYW
QVLPSGVLDSVTTLMKKANFLYLYISILVCGSMLGMHRQTLVNGLARIFIPMIIGTVV
AIATGLLVGVALGYSVHHTIFYIIVPIICGGVGEGILPLSIAYSGILGPEAGTFVAQM
IPAAVIGNIVAIIAAGLLKRIGDRNPAYSGDGVLVKSSENLANMPSAADKPIDFSIMG
AGLLMACSFFIVGTVLAHFIGIPGPIIMILAAASAKALKLIPEKLETGAFQLYKFIAG
NLTWPLMVGLGMLYVPLKDVAAIISLPYVLTCIAIVVSMIISGFYVGMKINMYPVEAA
IVTGCRGGLGGTGDVAILSAANRMSLMPFAQISTRIGGAATVIGATILLQMWH"
misc_feature 236915..238150
/locus_tag="Tola_0212"
/note="2-hydroxycarboxylate transporter family; Region:
2HCT; pfam03390"
/db_xref="CDD:146169"
gene 238233..239666
/locus_tag="Tola_0213"
/db_xref="GeneID:7885726"
CDS 238233..239666
/locus_tag="Tola_0213"
/EC_number="1.1.1.38"
/inference="protein motif:PRIAM:1.1.1.38"
/note="PFAM: malic protein NAD-binding; malic protein
domain protein;
KEGG: sat:SYN_00517 NAD-dependent malic enzyme"
/codon_start=1
/transl_table=11
/product="Malate dehydrogenase
(oxaloacetate-decarboxylating)"
/protein_id="YP_002891429.1"
/db_xref="GI:237806989"
/db_xref="InterPro:IPR001891"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR012301"
/db_xref="InterPro:IPR012302"
/db_xref="GeneID:7885726"
/translation="MTINAAKHHNYIVRAIGGEKIKYVNEIIQGIESNKGEIKKIEAA
YKENKDKSVLVHFHVNDLTSIAQIKDNLENRFGEADIQFMDEITHLHLGGKLETTLKH
SIDTMADLAKVYTPGVAQVCMEIAHNPERAYDLTVKKNTVAVVSDGTAVLGLGDIGPE
AAMPVMEGKAALFKQFAGVDAFPICLDTKDTEEIIMIVKALAPTFGGINLEDISAPRC
FEIEERLKQELDIPVFHDDQHGTAVTVLAGFLNALKVCEKNIADVKVVLVGIGAAGIA
VSKMLLNAGVKNLIGVDRNGAIHRGEPYSNESWNEYARLTNPDNLQGPLSDVIEGADV
FIGLSGPGVLKVDYLKTMAKDPIVFAMANPAPEISPEEAAPYVRVMATGRSDYPNQLN
NVLCFPGIFRGALDCGARQITEEMKLEVAKAIASAVSDEELSETYIIPDIFNKEVVKR
VRDAVVETAHRTGMARIRNNKLESLTV"
misc_feature 238464..239663
/locus_tag="Tola_0213"
/note="Malic enzyme [Energy production and conversion];
Region: SfcA; COG0281"
/db_xref="CDD:30629"
misc_feature 238509..238910
/locus_tag="Tola_0213"
/note="Malic enzyme, N-terminal domain; Region: malic;
pfam00390"
/db_xref="CDD:201200"
misc_feature 238944..239609
/locus_tag="Tola_0213"
/note="NAD(P) binding domain of malic enzyme (ME),
subgroup 2; Region: NAD_bind_2_malic_enz; cd05311"
/db_xref="CDD:133453"
misc_feature order(239040..239051,239109..239114,239244..239249,
239259..239261,239313..239321,239379..239381,
239403..239405,239409..239411)
/locus_tag="Tola_0213"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:133453"
gene 239797..241407
/locus_tag="Tola_0214"
/db_xref="GeneID:7885727"
CDS 239797..241407
/locus_tag="Tola_0214"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein; PAS
fold domain protein;
SMART: ATP-binding region ATPase domain protein;
KEGG: spe:Spro_1959 sensory histidine kinase DcuS"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase regulating
citrate/malate metabolism"
/protein_id="YP_002891430.1"
/db_xref="GI:237806990"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:7885727"
/translation="MLKQTPPLKLRTTITLLVCSVIALVLFVVHSVYLTQSTEQTRFS
LEDKAKAVLHTLTAAPFIASALSNGGDKAALQDYIEQVRQQNELLFIVVMDMQGIRHT
HPDPSLIGKHFIGGDEVKALHGQESISEAKGTLGPSLRIISPLFDARHQQIGAIAVGI
STEKIQEIIAANRWFAYWAIAFGGLVGSFGAFFLARKIKKIMFGMEPSEIASLLEERN
AMLQSIREGIIAVNADEKITLINDEAKRLLRQNGELENLLLTESSKHWPALLHLRQVL
ATGQARQDEEIEFNGSTLLTNSVPVRVNGKVTGAVVTFRDKTEISQLLQRLSGISHYA
EALRVQAHEFMNKLHVILGMVNIRAYDQLENYIMDTANYYHAEVGSLIRQIKDPVIAG
FILGKMNRGREIGIDVNVTPTSYLPESAESEVTHELVTVLGNLLENAMDALEGSDSAA
IVLTFDHDDGHLRCTVSDNGQGIEPAVAAHIFEHGFSTKGTRRGIGLFLVRQSLEKLG
GTIECQSKPGEGTRFIVSLPYASKECGL"
misc_feature 239797..241395
/locus_tag="Tola_0214"
/note="sensory histidine kinase DcuS; Provisional; Region:
PRK11086"
/db_xref="CDD:182952"
misc_feature 241078..241377
/locus_tag="Tola_0214"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(241096..241098,241108..241110,241117..241119,
241192..241194,241198..241200,241204..241206,
241210..241215,241276..241287,241333..241335,
241339..241341,241354..241359,241363..241365)
/locus_tag="Tola_0214"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 241108..241110
/locus_tag="Tola_0214"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(241204..241206,241210..241212,241276..241278,
241282..241284)
/locus_tag="Tola_0214"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 241404..242126
/locus_tag="Tola_0215"
/db_xref="GeneID:7885728"
CDS 241404..242126
/locus_tag="Tola_0215"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver;
SMART: response regulator receiver;
KEGG: eca:ECA4398 DNA-binding transcriptional activator
DcuR"
/codon_start=1
/transl_table=11
/product="response regulator receiver"
/protein_id="YP_002891431.1"
/db_xref="GI:237806991"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:7885728"
/translation="MINVLIVDDDPMVAELNRRYLEQVDGFRWLGSVSTIQAAKQKLL
ESEPPIDLVLLDIYMQKDNGLDLLPVIRQMPNNIDVIMISSASDMPAIKKALRYGVVD
YLIKPFQFARFQEALSAYREERQMLAQREELNQSELDNLIRRSNSRPASEKLRLPKGL
TRLTLQAVWEWIKQGHRQGFSTEEMANEIGISRVSCRKYLVYMAEIGVLDTDIFYGSV
GRPVYLYKLVPAKVEIMDTLLR"
misc_feature 241404..242108
/locus_tag="Tola_0215"
/note="DNA-binding transcriptional activator DcuR;
Provisional; Region: PRK10430"
/db_xref="CDD:182454"
misc_feature 241416..241763
/locus_tag="Tola_0215"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(241425..241430,241569..241571,241593..241595,
241653..241655,241710..241712,241719..241724)
/locus_tag="Tola_0215"
/note="active site"
/db_xref="CDD:29071"
misc_feature 241569..241571
/locus_tag="Tola_0215"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(241578..241583,241587..241595)
/locus_tag="Tola_0215"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 241719..241727
/locus_tag="Tola_0215"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 242313..244607
/locus_tag="Tola_0216"
/db_xref="GeneID:7885729"
CDS 242313..244607
/locus_tag="Tola_0216"
/inference="protein motif:TFAM:TIGR00254"
/note="KEGG: sdn:Sden_0572 GGDEF domain-containing
protein;
TIGRFAM: diguanylate cyclase;
PFAM: EAL domain protein; GGDEF domain containing protein;
CHASE4 domain protein; histidine kinase HAMP region domain
protein;
SMART: EAL domain protein; GGDEF domain containing
protein"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase/phosphodiesterase with
extracellular sensor"
/protein_id="YP_002891432.1"
/db_xref="GI:237806992"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR000215"
/db_xref="InterPro:IPR001633"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR007892"
/db_xref="GeneID:7885729"
/translation="MHMTRLHKQIVNRVGLIVIALAFLVTASCIGIISWLYLKTDAEQ
VAAELTKVELLLQNERDGLSRAVNDYAVWDDAYDYVSKPNRKFETDNFTQQSLNVMQL
DFVAIMAAPGKTLFSSEINPAYSNITATPAIHTPLLWSLLAKLPDWQQRNGEKMQSTY
LTAANGRPLLLAVSGIFDSSLEQPHSGLMIFGRYLDGTYLQRLQQLAESQLQISAQMP
VQKITAPLYHTEQTASKRLTSWQTPDIWLQVSKDVNWQQRYLMMALFALGLLLVLLFT
SWVLQRLLNRLVVERIETFAELASRRTQGERIYWPVEGQNELDLLARTFNELMDEVQA
AQKNMHDLSITDTLTALGNRRGMEEQVSKMMKTCQLGTPLSMLLMDLDGFKLINDSLG
HAAGDLLLQEVAQRMRQVMRRQDKLFRMGGDEFAVLMPHTTAEQGHLLAERLIETLVA
PIHFGQHRLSVSGSVGVAQWDGETDGLELMRHADLAMYVAKRDGKSCVRLFEKGMSGV
ASERMTLEQELRRAIAEQSIEPHFQPVIDTGSGNVVAVEMLARWRRNNESVPPLGFIR
LAEDLGLINQLSMQLLEKGLTALRHFRQHYPELKLQINISPLQFADRHLALTMLQTIA
AYDLPSTALAVELTEGAMLLYPEQVEQTMRQFVEAGVSLHLDDFGTGYSSLARLRDLP
FDTVKLDRSFVVMLGEGDTTLSQAVFDMATSMHMDLIAEGVENQTEYEELQAIGYRQM
QGYMFARPMPETALIQWLQAHAAA"
misc_feature 242478..242954
/locus_tag="Tola_0216"
/note="CHASE4 domain; Region: CHASE4; cl01308"
/db_xref="CDD:154325"
misc_feature 243168..243320
/locus_tag="Tola_0216"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cl01054"
/db_xref="CDD:198627"
misc_feature 243345..243809
/locus_tag="Tola_0216"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature order(243450..243452,243579..243581)
/locus_tag="Tola_0216"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(243465..243467,243474..243479,243489..243491,
243501..243503,243567..243569,243573..243584)
/locus_tag="Tola_0216"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(243555..243557,243639..243641)
/locus_tag="Tola_0216"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature 243861..244565
/locus_tag="Tola_0216"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene complement(244649..245449)
/locus_tag="Tola_0217"
/db_xref="GeneID:7885730"
CDS complement(244649..245449)
/locus_tag="Tola_0217"
/inference="protein motif:TFAM:TIGR00097"
/note="TIGRFAM: phosphomethylpyrimidine kinase;
PFAM: Phosphomethylpyrimidine kinase type-1;
KEGG: kpe:KPK_1619 phosphomethylpyrimidine kinase"
/codon_start=1
/transl_table=11
/product="phosphomethylpyrimidine kinase"
/protein_id="YP_002891433.1"
/db_xref="GI:237806993"
/db_xref="InterPro:IPR004399"
/db_xref="InterPro:IPR013749"
/db_xref="GeneID:7885730"
/translation="MIPHTLTIAGSDCSGGAGIQADLKTFSALGTYGMSVITALTAQN
TQGVQAVHAVPAAFVTAQCQAVFSDIRVDAVKIGMLADTAIIAAVAEALREWRPACVV
LDPVMVSKNGHRLLADSAIDALRRHLLPQASIVTPNLPEAAALLGCDEATTETEMVEQ
GRNLLKAGCQAVLMKGGHLSGSNSPDWLITPQEAIPFTAPRIQTKNTHGTGCTLSSAI
AALYPRYKNWPETISHAKTWLSGALAQADQLDVGHGIGPVHHFYQWWQ"
misc_feature complement(244712..245440)
/locus_tag="Tola_0217"
/note="4-amino-5-hydroxymethyl-2-methyl-pyrimidine
phosphate kinase (HMPP-kinase) catalyzes two consecutive
phosphorylation steps in the thiamine phosphate
biosynthesis pathway, leading to the synthesis of vitamin
B1. The first step is the phosphorylation of...; Region:
HMPP_kinase; cd01169"
/db_xref="CDD:29353"
misc_feature complement(order(245252..245257,245267..245269,
245276..245278,245285..245290,245294..245296,
245300..245305,245318..245332,245339..245341,
245345..245362,245369..245371,245378..245383,
245390..245392,245402..245404,245408..245413,
245417..245419,245438..245440))
/locus_tag="Tola_0217"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29353"
misc_feature complement(order(244814..244816,245213..245215,
245321..245323,245384..245386,245420..245422))
/locus_tag="Tola_0217"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29353"
misc_feature complement(order(244817..244819,244823..244825,
244925..244927,245027..245029,245138..245140))
/locus_tag="Tola_0217"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29353"
gene complement(245446..246081)
/locus_tag="Tola_0218"
/db_xref="GeneID:7885731"
CDS complement(245446..246081)
/locus_tag="Tola_0218"
/EC_number="2.5.1.3"
/inference="protein motif:TFAM:TIGR00693"
/note="KEGG: sfu:Sfum_3508 thiamine-phosphate
pyrophosphorylase;
TIGRFAM: thiamine-phosphate pyrophosphorylase;
PFAM: thiamine monophosphate synthase"
/codon_start=1
/transl_table=11
/product="thiamine-phosphate pyrophosphorylase"
/protein_id="YP_002891434.1"
/db_xref="GI:237806994"
/db_xref="InterPro:IPR003733"
/db_xref="GeneID:7885731"
/translation="MKLDLSLYLVLDPVMCGGFDATIKLTQQVLDAGVTVIQLRAPQW
KKRDWLRLSQQILPMSREARVPFLINDHIDIALACDADGVHLGQGDLPLAMARQLLGP
DKILGLSISKAHHLQGDDCLLADYLGIGPVFPTGTKQDADPAIGLATFRDWMTQIHQP
VVAIGGIGASETSDIIRAGADGIAVVSAICAVADPALATRTLGQLIHEARP"
misc_feature complement(245476..246063)
/locus_tag="Tola_0218"
/note="Thiamine monophosphate synthase (TMP
synthase)/TenI. TMP synthase catalyzes an important step
in the thiamine biosynthesis pathway, the substitution of
the pyrophosphate of 2-methyl-4-amino-5-
hydroxymethylpyrimidine pyrophosphate by 4-methyl-5-;
Region: TMP_TenI; cd00564"
/db_xref="CDD:73367"
misc_feature complement(order(245521..245532,245584..245586,
245596..245598,245671..245673,245677..245679,
245698..245700,245704..245706,245755..245757,
245827..245829,245962..245964,245968..245970,
246052..246054,246058..246060))
/locus_tag="Tola_0218"
/note="thiamine phosphate binding site [chemical binding];
other site"
/db_xref="CDD:73367"
misc_feature complement(order(245521..245526,245584..245586,
245668..245673,245677..245679,245755..245757,
245812..245814,245869..245874,245956..245958,
245962..245964,245968..245970))
/locus_tag="Tola_0218"
/note="active site"
/db_xref="CDD:73367"
misc_feature complement(order(245668..245670,245755..245757,
245812..245814,245821..245823,245869..245874,
245956..245958,245962..245964))
/locus_tag="Tola_0218"
/note="pyrophosphate binding site [ion binding]; other
site"
/db_xref="CDD:73367"
gene complement(246078..246881)
/locus_tag="Tola_0219"
/db_xref="GeneID:7885732"
CDS complement(246078..246881)
/locus_tag="Tola_0219"
/EC_number="2.7.1.50"
/inference="protein motif:TFAM:TIGR00694"
/note="KEGG: eca:ECA3197 hydroxyethylthiazole kinase;
TIGRFAM: hydroxyethylthiazole kinase;
PFAM: hydroxyethylthiazole kinase"
/codon_start=1
/transl_table=11
/product="hydroxyethylthiazole kinase"
/protein_id="YP_002891435.1"
/db_xref="GI:237806995"
/db_xref="InterPro:IPR000417"
/db_xref="GeneID:7885732"
/translation="MPQALPATIVATHLERIRRSVPLTHVITNDVVTGFTANVLLALG
AAPAMITAPEEAGSFAAIASVLSVNVGTLTSAQAATIRIAVQSANQAGTPWVLDPVAA
GVLPYRTELCRELLQQHPAAIRGNASEIMALAGQAAAGKGVDSANQSDQAIEAAQVLA
KSSGAIVAVTGEIDYITDGERVVSIKAGDPLMTRVTGTGCALSSVVAAFIAGCEEKDR
LDAVASACAVMAIAGQRAAAKAKGPGSFVPAFLDNLYLLDAVTIAEALA"
misc_feature complement(246117..246842)
/locus_tag="Tola_0219"
/note="4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase
catalyzes the phosphorylation of the hydroxylgroup of Thz.
A reaction that allows cells to recycle Thz into the
thiamine biosynthesis pathway, as an alternative to its
synthesis from cysteine, tyrosine...; Region: THZ_kinase;
cd01170"
/db_xref="CDD:29354"
misc_feature complement(order(246666..246671,246675..246677,
246735..246737,246741..246743,246759..246761,
246771..246773,246789..246791,246795..246797))
/locus_tag="Tola_0219"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29354"
misc_feature complement(order(246117..246119,246126..246131,
246135..246143,246147..246152,246294..246305,
246558..246563,246660..246671,246705..246710,
246717..246722,246726..246737,246759..246761,
246768..246773,246777..246794))
/locus_tag="Tola_0219"
/note="multimerization interface [polypeptide binding];
other site"
/db_xref="CDD:29354"
misc_feature complement(order(246282..246284,246288..246290,
246306..246308,246360..246362,246366..246368,
246372..246374,246495..246497,246504..246506,
246510..246512,246588..246590))
/locus_tag="Tola_0219"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29354"
misc_binding complement(246930..247022)
/note="TPP riboswitch (THI element) as predicted by
Rfam(RF 00059), score 62.11"
/bound_moiety="thiamin/thiaminpyrophosphate"
gene complement(247076..247534)
/locus_tag="Tola_0220"
/db_xref="GeneID:7885733"
CDS complement(247076..247534)
/locus_tag="Tola_0220"
/inference="similar to AA sequence:KEGG:AHA_2860"
/note="KEGG: aha:AHA_2860 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891436.1"
/db_xref="GI:237806996"
/db_xref="GeneID:7885733"
/translation="MLLEILGLKFLTSNIREMIMTYPLSPEEFQTTLAQDAEQRYHHF
LQQAVLHNEVWILKDDEGCVSLSTDDEECIPVWPHPDYAKAWAGNDFAACEPYAVPLK
TWLDRWVKGMSEDGVAVAVFPLADADGVVEDPATMADDLLRKMAKLNRKK"
misc_feature complement(247109..247417)
/locus_tag="Tola_0220"
/note="Protein of unknown function (DUF2750); Region:
DUF2750; pfam11042"
/db_xref="CDD:192700"
gene 247605..248774
/locus_tag="Tola_0221"
/db_xref="GeneID:7885734"
CDS 247605..248774
/locus_tag="Tola_0221"
/inference="protein motif:PFAM:PF00480"
/note="PFAM: ROK family protein;
KEGG: mes:Meso_3115 ROK domain containing protein"
/codon_start=1
/transl_table=11
/product="ROK family protein"
/protein_id="YP_002891437.1"
/db_xref="GI:237806997"
/db_xref="InterPro:IPR000600"
/db_xref="GeneID:7885734"
/translation="MDINGKNRVVNLLRQHSHSRVELAKKTGLVKSSLTKITQQLLND
GIIEEIDVLQPKSRHRSDGRPQTLLQLKPRVNHSICFYVSTENICGNLIDQTNTIIDN
YQQIWDLTRPESALSVEFFVDLIKKISIRLCEQNQLSLTEIKIITVATQGKLAQASGT
VFYSQLFKDKHFNLTAAITAATGIESKIFNIAYCSSHRIQQLYPQHDSFITVLLGYGV
GVGIVIDKQIILGPQGTAPEISHVTYSEHGPLCYCGARGCAETYLTYHAIIGKINKSD
PQNFPRDTIAKQLEHINQELSRHNILCEQIIREVGRVLGHVLSQLITIFNIKTVILNG
EISVFYPLLKEEIDTYLAGHSDYRYGAGSTHILREPDDNVAFQGLIELTNESYLV"
misc_feature 247815..248672
/locus_tag="Tola_0221"
/note="Transcriptional regulator/sugar kinase
[Transcription / Carbohydrate transport and metabolism];
Region: NagC; COG1940"
/db_xref="CDD:32123"
misc_feature <248115..248408
/locus_tag="Tola_0221"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:213144"
gene complement(248832..250367)
/locus_tag="Tola_0222"
/db_xref="GeneID:7885735"
CDS complement(248832..250367)
/locus_tag="Tola_0222"
/inference="protein motif:PFAM:PF07632"
/note="PFAM: protein of unknown function DUF1593;
KEGG: sde:Sde_0565 signal peptide and transmembrane
prediction"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891438.1"
/db_xref="GI:237806998"
/db_xref="InterPro:IPR011483"
/db_xref="GeneID:7885735"
/translation="MAKKQQKKSYKHKYLAGSLILGMMSASIISSSVSAAENIDMYSG
HPRMFVLTDMGNEPDDQMSMVRLLTYSNEIDLEGLVATTSTWQRSKRETGTIKGIISA
YDEVRPNLMKHAANWPTKSYLESLVTNGQPGYGMADVGKGKSSPGSQALIAAVDKADE
RPVWVTVWGGANTLAQALYDVKATRSAEQLKQFEAKLRVYSISDQDDAGPWIRKEFPN
VSYIVKPSSPDGGEYASATWTGIAGDEYYKNGAGADFSKVANEWLDVNIRSKGPLGKH
YLKYAFIMEGDTPAYLGLTDNGLNSFRSPSWGGWGGRYIYRQPYGESRSIWTQGGDWF
PRVTSADTVVGADGKEYTSDQATIWRWRDQFQNDFAARMDWTIKSFDDANHHPVLSVN
GNEGKEVIYINAKPGDSISLDASASHDPDKNALTYSWFHYKEAGYSGEVGKPGLADIT
VLSADQSKTTVKVNKTCRDVWLPDAKAPCDEGGEAHVILAVTDNGQPALTSYRRVVIK
VKN"
misc_feature complement(249426..250229)
/locus_tag="Tola_0222"
/note="Protein of unknown function (DUF1593); Region:
DUF1593; pfam07632"
/db_xref="CDD:203702"
gene 251260..252396
/locus_tag="Tola_0223"
/db_xref="GeneID:7885736"
CDS 251260..252396
/locus_tag="Tola_0223"
/inference="protein motif:PFAM:PF08240"
/note="NAD-binding"
/codon_start=1
/transl_table=11
/product="L-idonate 5-dehydrogenase"
/protein_id="YP_002891439.1"
/db_xref="GI:237806999"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:7885736"
/translation="MLRNTNFSDSSHKNESNFIVIWHHFLDVSGALKMLKTNSCVVNG
KKNVSVVSQDVIYEKDGTLVEVTRGGICGSDLHYYHNGKVGNFEVKQPMILGHEVIGI
IKETDSNGLKLNQRVAINPSKPCGKCKYCKEHNENQCVNMRFFGSAMYFPHVNGGFTQ
YKIVDSSQCVPFGEKSDERRMAFAEPLAVAIHAAKQAGNVENKNIIVSGVGPIGCLLV
SALKVLGAKEIVCVDVSEKSLSLAKKMGGTKFINTVNSNLDEYKNEKGFFDIAFEVSG
HPDSLKNCLSVTRAKGTIVQVGMGGDIPEFPIMQLIAKEIKLVGAFRFNEEFYTSVSW
LDSNKINPLPLLSGEFPFQELETALDFASNKSLAAKVQLIFKGA"
misc_feature 251356..252384
/locus_tag="Tola_0223"
/note="L-idonate 5-dehydrogenase; Provisional; Region:
PRK09880"
/db_xref="CDD:182130"
misc_feature 251437..252384
/locus_tag="Tola_0223"
/note="L-idonate 5-dehydrogenase; Region: idonate-5-DH;
cd08232"
/db_xref="CDD:176194"
misc_feature order(251473..251481,251488..251490,251812..251814,
251824..251826,251884..251901,251956..251961,
251971..251973,252016..252018,252079..252084,
252088..252090,252148..252153,252220..252228)
/locus_tag="Tola_0223"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176194"
misc_feature order(251473..251475,251479..251481,251548..251550,
251812..251814)
/locus_tag="Tola_0223"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176194"
gene 252398..253162
/locus_tag="Tola_0224"
/db_xref="GeneID:7885737"
CDS 252398..253162
/locus_tag="Tola_0224"
/inference="protein motif:PFAM:PF00106"
/note="Involved in the nonphosphorylative, ketogenic
oxidation of glucose and oxidizes gluconate to
5-ketogluconate"
/codon_start=1
/transl_table=11
/product="gluconate 5-dehydrogenase"
/protein_id="YP_002891440.1"
/db_xref="GI:237807000"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="GeneID:7885737"
/translation="MKNLFSLSNKKVLITGSAQGIGFLLATGLADQGAEIIVNDVTHE
KAETAVSKLRDLGYTAYPMAFDVTKKNEVDKAIDKIESDIGAIDVLINNAGIQRRHPF
TEFPEQEWNDVISVNQTAVFLVSQAVAKKMINRKEGKIINICSMQSELGRDTITPYAA
SKGAVKMLTRGMCVELARYNIQINGIAPGYFKTEMTKALVENEEFTSWLTKRTPAARW
GDPEELIGAAVFLSSKASDFVNGHLLFVDGGMLVAV"
misc_feature 252407..253153
/locus_tag="Tola_0224"
/note="2-deoxy-D-gluconate 3-dehydrogenase; Provisional;
Region: PRK06935"
/db_xref="CDD:180761"
misc_feature 252410..253153
/locus_tag="Tola_0224"
/note="gluconate 5-dehydrogenase (Ga5DH)-like, classical
(c) SDRs; Region: Ga5DH-like_SDR_c; cd05347"
/db_xref="CDD:187605"
misc_feature order(252443..252445,252449..252460,252515..252523,
252590..252598,252674..252685,252743..252745,
252824..252832,252869..252871,252881..252883,
252959..252970,252974..252985)
/locus_tag="Tola_0224"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187605"
misc_feature order(252605..252607,252698..252712,252716..252718,
252725..252730,252737..252739,252752..252754,
252761..252766,252773..252775,252782..252784,
252836..252844,252860..252865,252872..252877,
252884..252889,252896..252901,252905..252913,
252917..252925)
/locus_tag="Tola_0224"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187605"
misc_feature order(252746..252748,252830..252832,252869..252871,
252881..252883)
/locus_tag="Tola_0224"
/note="active site"
/db_xref="CDD:187605"
gene 253210..254529
/locus_tag="Tola_0225"
/db_xref="GeneID:7885738"
CDS 253210..254529
/locus_tag="Tola_0225"
/inference="protein motif:TFAM:TIGR00791"
/note="TIGRFAM: gluconate transporter;
PFAM: Gluconate transporter; Citrate transporter;
KEGG: stm:STM4482 L-idonate transport protein"
/codon_start=1
/transl_table=11
/product="gluconate transporter"
/protein_id="YP_002891441.1"
/db_xref="GI:237807001"
/db_xref="InterPro:IPR003474"
/db_xref="InterPro:IPR004680"
/db_xref="GeneID:7885738"
/translation="MPLVVIGIGVCLLLLLMIKFKVNGFIALILVAGLVGIGEGMTPL
TVVKSIQTGIGGTLGGLAMILGFGAMVGRLISDTGAAQRIATTLIETFGEKYVQWALV
ITGLAVGLAMFYEVGFVLLLPLVFTIVAAAGMPLLYVGIPMVAALSVTHCFLPPHPGP
TAIATIFGANLGTTLLYGLIITIPTVIIAGPLFSKFLKNFEKEPPKGLFNPRVFTEEE
MPSFGISLLVAIIPVVLMGAAAICEMTLPKDNLLRQSLEFVGHPAVALFVAIILAIFF
LGMRNGKKIDSVMDIISDSIGAISMIMFIIAGGGAFKQVLVDSGVGTYIADIMRGSSL
SPLLMCWCVAAMLRIALGSATVAAITTAGIVLPLIPLTHADPALMVLATGAGSVIASH
VNDPGFWLFKGYFNLSVGETIRVWTVMETLISVLGLIGVLSLNSFLH"
misc_feature 253258..254523
/locus_tag="Tola_0225"
/note="gluconate transporter; Region: gntP; TIGR00791"
/db_xref="CDD:129873"
misc_feature 253258..254514
/locus_tag="Tola_0225"
/note="Na+-H+ antiporter family; Region: Na_H_antiport_2;
cl15264"
/db_xref="CDD:210060"
gene 254580..255578
/locus_tag="Tola_0226"
/db_xref="GeneID:7885739"
CDS 254580..255578
/locus_tag="Tola_0226"
/inference="protein motif:PFAM:PF00356"
/note="PFAM: regulatory protein LacI; periplasmic binding
protein/LacI transcriptional regulator;
SMART: regulatory protein LacI;
KEGG: see:SNSL254_A4829 HTH-type transcriptional regulator
IdnR"
/codon_start=1
/transl_table=11
/product="transcriptional regulator, LacI family"
/protein_id="YP_002891442.1"
/db_xref="GI:237807002"
/db_xref="InterPro:IPR000843"
/db_xref="InterPro:IPR001761"
/db_xref="GeneID:7885739"
/translation="MKNHRITLQDIANLADVTKMTVSRYIKSPNLVAPETRKRISEIM
EEINYIPNRAPSMLLNTKSYTIGVLIPSFRNHLFSDLLAGIESVTTPKQYQTLIANYN
YSPEEEEEKIINLLSYNIDGIILCEKNHSIKAVKYLRSSNIPIVEVMDSEGPCLDMEV
GYDNKKASFDMTKTMIENKKRKQVVYFGSQDDRRDELRFQGYTLGVREYGLKPYIISP
KTISSIEIGEYLCKEAFEKYPGMDGAICTNDDIAVGVLLYCKKNKISVPDEFSIAGFN
GLEIGRRMIPSIASVVTPRFQVGKTAAEILLNKITNENFNSHSIELGYQIYLGETI"
misc_feature 254580..255575
/locus_tag="Tola_0226"
/note="gluconate operon transcriptional regulator;
Provisional; Region: PRK14987"
/db_xref="CDD:184949"
misc_feature 254604..254753
/locus_tag="Tola_0226"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature order(254604..254606,254628..254642,254646..254651,
254658..254660,254673..254678,254685..254687,
254724..254726,254733..254735,254742..254747,
254751..254753)
/locus_tag="Tola_0226"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature 254724..254753
/locus_tag="Tola_0226"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature 254772..255572
/locus_tag="Tola_0226"
/note="Ligand-binding domain of DNA transcription
repressor GntR specific for gluconate, a member of the
LacI-GalR family of bacterial transcription regulators;
Region: PBP1_GntR; cd01575"
/db_xref="CDD:107260"
misc_feature order(254772..254774,254811..254819,254826..254831,
254835..254840,254859..254873,254877..254879,
254910..254912,254919..254921,254928..254936,
255252..255254,255336..255338,255348..255350,
255357..255362)
/locus_tag="Tola_0226"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:107260"
misc_feature order(254808..254813,254820..254822,254955..254957,
255024..255026,255063..255065,255171..255173,
255243..255245,255405..255407,255456..255458)
/locus_tag="Tola_0226"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107260"
gene 255595..256122
/locus_tag="Tola_0227"
/db_xref="GeneID:7885740"
CDS 255595..256122
/locus_tag="Tola_0227"
/EC_number="2.7.1.12"
/inference="protein motif:TFAM:TIGR01313"
/note="KEGG: msu:MS0957 GntK protein;
TIGRFAM: carbohydrate kinase, thermoresistant glucokinase
family;
PFAM: shikimate kinase"
/codon_start=1
/transl_table=11
/product="thermoresistant glucokinase family carbohydrate
kinase"
/protein_id="YP_002891443.1"
/db_xref="GI:237807003"
/db_xref="InterPro:IPR000623"
/db_xref="InterPro:IPR006001"
/db_xref="GeneID:7885740"
/translation="MNDFFKANGIILMGVSSTGKSSVGAALAKVIGAKFIDGDDLHPR
NNILKMSNKQPLNDDDRSPWLERIRDAAFSLEKKNETGIIVCSALKKKYRDLIREGNE
HVAFLHLAGDFELVLARMQARKGHFMPVELLKNQFETLESPDASEPDVIHIDIDGNFD
EVVDRCVTAIHQRGE"
misc_feature 255622..256059
/locus_tag="Tola_0227"
/note="Gluconate kinase (GntK) catalyzes the phosphoryl
transfer from ATP to gluconate. The resulting product
gluconate-6-phoshate is an important precursor of
gluconate metabolism. GntK acts as a dimmer composed of
two identical subunits; Region: GntK; cd02021"
/db_xref="CDD:30194"
misc_feature 255631..256107
/locus_tag="Tola_0227"
/note="Gluconate kinase [Carbohydrate transport and
metabolism]; Region: GntK; COG3265"
/db_xref="CDD:33076"
misc_feature order(255634..255657,255703..255705,255709..255711,
255949..255951,255961..255963)
/locus_tag="Tola_0227"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:30194"
misc_feature order(255640..255645,255961..255963)
/locus_tag="Tola_0227"
/note="Gluconate-6-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:30194"
gene 256141..257943
/locus_tag="Tola_0228"
/db_xref="GeneID:7885741"
CDS 256141..257943
/locus_tag="Tola_0228"
/EC_number="4.2.1.12"
/inference="protein motif:TFAM:TIGR01196"
/note="catalyzes the formation of
2-dehydro-3-deoxy-6-phospho-D-gluconate from
6-phospho-D-gluconate"
/codon_start=1
/transl_table=11
/product="phosphogluconate dehydratase"
/protein_id="YP_002891444.1"
/db_xref="GI:237807004"
/db_xref="InterPro:IPR000581"
/db_xref="InterPro:IPR004786"
/db_xref="GeneID:7885741"
/translation="MKNVIEQVTRRIAERSHETRSRYVARMKAQAENGKTRTHLSCGN
LAHTVAACSSMQKSTILDFTKVNVGIITAYNDMLSAHEPYDVYPQFIKDALRNVGHSA
QVAGGVPAMCDGVTQGQEGMDVSLFSREVIAQATAVSLSHNTFDATLLLGICDKIAPG
QLMGALSFGHLPTAFVPAGPMPTGISNDEKVKVRQKYAAGEVGKDALQKMECGAYHSS
GTCTFYGTANTNQLVFEAMGLMLPGSAFLPPSVELRAALTEQIVLHITSQADSGTLYR
PLWQVMDEKSIVNGLVVLLASGGSTNHSMHLVAVAAAAGYILTWDDIDTLSQVVPLLA
KMYPNGPADINDFQNAGGVPTLMKGLAERGLLNMDATPVFGCMEDYLKTPHLNGGAVV
YRPATDSKNPEVIALPGTFFSAQGGLKVVDGNLGRGVIKISAVAPEHHFIEAPARVFE
SQHDVEKAYHAGEFTSDVVIVVRFNGPAANGMPELHKLMPVLGNLMKAGLKVALVTDG
RLSGASGKVPAVIHMSPEAQRGGPLAKIATGDVIRVDAANGKIDVLTDIQARAPAQVD
LTREHFGSGRELFSVFRQVVSGAEQGATIFNYLG"
misc_feature 256141..257934
/locus_tag="Tola_0228"
/note="phosphogluconate dehydratase; Validated; Region:
PRK09054"
/db_xref="CDD:181628"
misc_feature 256153..257928
/locus_tag="Tola_0228"
/note="6-phosphogluconate dehydratase; Region: edd;
TIGR01196"
/db_xref="CDD:130264"
gene 257959..258606
/locus_tag="Tola_0229"
/db_xref="GeneID:7885742"
CDS 257959..258606
/locus_tag="Tola_0229"
/inference="protein motif:TFAM:TIGR01182"
/note="TIGRFAM: 2-dehydro-3-deoxyphosphogluconate
aldolase/4-hydroxy-2-oxoglutarate aldolase;
PFAM: KDPG and KHG aldolase;
KEGG: pin:Ping_2930 2-dehydro-3-deoxyphosphogluconate
aldolase/4-hydroxy-2-oxoglutarate aldolase"
/codon_start=1
/transl_table=11
/product="2-dehydro-3-deoxyphosphogluconate aldolase"
/protein_id="YP_002891445.1"
/db_xref="GI:237807005"
/db_xref="InterPro:IPR000887"
/db_xref="GeneID:7885742"
/translation="MSWQVEPAAVFAASPVVPVMVIKRVEDAVPMAKALAEGGITVFE
ITLRTPAALDAIRAIAAALPETQVGAGTVLTPEQYDAAVEAGAKFIISPGYTRTLMEH
AKKGPSPLIPGVATPSEIMTALELGYDHLKFFPAEANGGAAALKAIAAPLAQVKFCPT
GGVSPKNVADYVALGCVATVGGTWMLPADAINTGDWATITELTQKAVELVNSLRR"
misc_feature 258022..258588
/locus_tag="Tola_0229"
/note="Entner-Doudoroff aldolase; Region: eda; TIGR01182"
/db_xref="CDD:162241"
misc_feature 258022..258564
/locus_tag="Tola_0229"
/note="KDPG and KHG aldolase; Region: KDPG_aldolase;
cd00452"
/db_xref="CDD:188632"
misc_feature order(258088..258090,258100..258102,258172..258174,
258352..258354,258358..258360,258436..258438)
/locus_tag="Tola_0229"
/note="active site"
/db_xref="CDD:188632"
misc_feature order(258100..258102,258172..258174,258178..258180,
258235..258246,258304..258315,258319..258321,
258331..258333,258358..258360,258364..258366,
258397..258399,258409..258414)
/locus_tag="Tola_0229"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:188632"
misc_feature 258352..258354
/locus_tag="Tola_0229"
/note="catalytic residue [active]"
/db_xref="CDD:188632"
gene complement(258798..259370)
/locus_tag="Tola_0230"
/db_xref="GeneID:7885743"
CDS complement(258798..259370)
/locus_tag="Tola_0230"
/inference="protein motif:TFAM:TIGR00621"
/note="TIGRFAM: single-strand binding protein;
PFAM: single-strand binding protein/Primosomal replication
protein n;
KEGG: slo:Shew_0535 single-strand binding protein"
/codon_start=1
/transl_table=11
/product="single-strand binding protein"
/protein_id="YP_002891446.1"
/db_xref="GI:237807006"
/db_xref="InterPro:IPR000424"
/db_xref="InterPro:IPR011344"
/db_xref="GeneID:7885743"
/translation="MARGVNKVIIVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQ
GQMQERTEWHRIVLYRRLAEIAGEYLRKGSKVYLEGRLQTREWQDPQGQKRYTTEIIA
NEMQMLDGRGAGAPQQGGNMGAPAQQPQQGNWGRPSAPAAAAPQGGATPGYAPQQAAP
QGSYTPAPAPAQQQPTYNEPPMDFDDDIPF"
misc_feature complement(258957..259361)
/locus_tag="Tola_0230"
/note="Single-stranded DNA-binding protein [DNA
replication, recombination, and repair]; Region: Ssb;
COG0629"
/db_xref="CDD:30974"
misc_feature complement(259047..259349)
/locus_tag="Tola_0230"
/note="SSB_OBF: A subfamily of OB folds similar to the OB
fold of ssDNA-binding protein (SSB). SSBs bind with high
affinity to ssDNA. They bind to and protect ssDNA
intermediates during DNA metabolic pathways. All bacterial
and eukaryotic SSBs studied to date...; Region: SSB_OBF;
cd04496"
/db_xref="CDD:72968"
misc_feature complement(order(259077..259079,259086..259088,
259119..259121,259146..259148,259209..259211,
259215..259217,259257..259265,259338..259349))
/locus_tag="Tola_0230"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:72968"
misc_feature complement(order(259068..259070,259074..259076,
259113..259118,259122..259124,259128..259130,
259152..259157,259194..259196,259200..259202,
259206..259208,259212..259214,259218..259223,
259254..259259,259278..259280,259308..259310,
259326..259334))
/locus_tag="Tola_0230"
/note="ssDNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:72968"
misc_feature complement(order(259053..259055,259134..259136,
259140..259142,259146..259148))
/locus_tag="Tola_0230"
/note="tetramer (dimer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:72968"
misc_feature complement(258801..>258842)
/locus_tag="Tola_0230"
/note="putative single-stranded DNA-binding protein;
Region: PHA01740"
/db_xref="CDD:133956"
gene 259566..262400
/locus_tag="Tola_0231"
/db_xref="GeneID:7885744"
CDS 259566..262400
/locus_tag="Tola_0231"
/inference="protein motif:TFAM:TIGR00630"
/note="TIGRFAM: excinuclease ABC, A subunit;
PFAM: ABC transporter related;
KEGG: aha:AHA_3955 excinuclease ABC, A subunit"
/codon_start=1
/transl_table=11
/product="excinuclease ABC subunit A"
/protein_id="YP_002891447.1"
/db_xref="GI:237807007"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR004602"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7885744"
/translation="MDKIEIRGARTHNLKNINLTLPRDKLIVITGLSGSGKSSLAFDT
LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT
EIYDYLRLLYARVGEPRCPEHDLPLAAQTISQMVDRVLAEPENRKMMILAPVVRNRKG
EHKQLLESLAAQGYIRARIDGEVCDLSDPPTLELQKKHTIEVVVDRFKVRPDLQLRLA
ESFETALHLSGGLVYVADMDDDKAQPLIFSANFACPECGYSLSELEPRLFSFNNPAGA
CPSCDGLGVQQYFDPHKVVTNPELSLTGGAIRGWDKRSFYYFQMLKSVADHYKFDLDE
PFDALSPQAKKVVLHGSGHTAIEFRYMNDRGDVVVRNHPFEGVLHNMERRYRETESNS
VREELAKYIANQPCPSCQGSRLRQEARHVYVTGVTLPQVSEMSIGEALNFFRNLQLDG
QRAQIAEKILKEIIERLGFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGV
MYVLDEPSIGLHQRDNERLLGTLFHLRNLGNTVIVVEHDEDAIRHADYVVDIGPGAGV
HGGVIVAQGTPAEVMANPDSVTGEYLSGRKKIAIPAERRPTGDKWLKLLGASGNNLKK
VDLHIPVGVMTCVTGVSGSGKSTLINDTLFRIAHRDLNGATVEKPAPYLDIQGMDYLD
KVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAATQEARSRGYAPGRFSFNVKGGRCE
ACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVTYKGKTIHEVLDMTVEDARAF
FDAVPALARKLQTLMEVGLSYIRLGQSATTLSGGEAQRVKLAKELSKRDTGQTLYILD
EPTTGLHFHDIQQLLNVLEKLRDNGNTIVIIEHNLDVIKTADWIVDLGPEGGSGGGMI
LTEGTPEQVAECAESHTARFLKPLLERDRA"
misc_feature 259566..262388
/locus_tag="Tola_0231"
/note="excinuclease ABC subunit A; Reviewed; Region: uvrA;
PRK00349"
/db_xref="CDD:178984"
misc_feature 259575..>259913
/locus_tag="Tola_0231"
/note="The excision repair protein UvrA domain I;
Nucleotide excision repair in eubacteria is a process that
repairs DNA damage by the removal of a 12-13-mer
oligonucleotide containing the lesion. Recognition and
cleavage of the damaged DNA is a multistep...; Region:
ABC_UvrA_I; cd03270"
/db_xref="CDD:73029"
misc_feature <260952..261290
/locus_tag="Tola_0231"
/note="The excision repair protein UvrA domain I;
Nucleotide excision repair in eubacteria is a process that
repairs DNA damage by the removal of a 12-13-mer
oligonucleotide containing the lesion. Recognition and
cleavage of the damaged DNA is a multistep...; Region:
ABC_UvrA_I; cd03270"
/db_xref="CDD:73029"
misc_feature 261399..262325
/locus_tag="Tola_0231"
/note="The excision repair protein UvrA domain II;
Nucleotide excision repair in eubacteria is a process that
repairs DNA damage by the removal of a 12-13-mer
oligonucleotide containing the lesion. Recognition and
cleavage of the damaged DNA is a multistep...; Region:
ABC_UvrA_II; cd03271"
/db_xref="CDD:73030"
gene complement(262466..263458)
/gene="ddl"
/locus_tag="Tola_0232"
/db_xref="GeneID:7885745"
CDS complement(262466..263458)
/gene="ddl"
/locus_tag="Tola_0232"
/EC_number="6.3.2.4"
/inference="protein motif:TFAM:TIGR01205"
/note="D-alanine--D-alanine ligase; DdlA; DdlB;
cytoplasmic; catalyzes the formation of D-alanyl-D-alanine
from two D-alanines in peptidoglycan synthesis; there are
two forms of this enzyme in Escherichia coli"
/codon_start=1
/transl_table=11
/product="D-alanyl-alanine synthetase A"
/protein_id="YP_002891448.1"
/db_xref="GI:237807008"
/db_xref="InterPro:IPR000291"
/db_xref="InterPro:IPR003135"
/db_xref="InterPro:IPR005905"
/db_xref="InterPro:IPR011095"
/db_xref="InterPro:IPR011127"
/db_xref="InterPro:IPR011761"
/db_xref="GeneID:7885745"
/translation="MKHLHVLLLCGGGGSEHEISLLSANYLESQLKELAEVSVTRVEL
FPDHWQTNDGRSCHLGMDRQLHFANEAKPVDFVVPCIHGFPGETGDIQSMLELIGLPY
LGCGSEGSKLCFNKVSTKLWLSALDIPNTPFLFLSDNNEAAHAQAHTAFRNWGAVFVK
AASQGSSVGCYKVTDAAKLSEAVNAAFGYSDQVLVEKAVRPRELEVAVYRYNDQLVAT
RPGEIATPSDSFYSYEEKYSSGSNSTTYLEAPGLSDAQISTIREYALKAFTQLGLKDL
SRIDFFLTEDNEILLNEINTFPGMTPISMFPKLLEHHGDNFKQFLEGIIRSTVK"
misc_feature complement(262481..263416)
/gene="ddl"
/locus_tag="Tola_0232"
/note="D-alanyl-alanine synthetase A; Reviewed; Region:
ddl; PRK01966"
/db_xref="CDD:179356"
misc_feature complement(263144..263416)
/gene="ddl"
/locus_tag="Tola_0232"
/note="D-ala D-ala ligase N-terminus; Region:
Dala_Dala_lig_N; pfam01820"
/db_xref="CDD:201991"
misc_feature complement(262484..263092)
/gene="ddl"
/locus_tag="Tola_0232"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl03087"
/db_xref="CDD:207834"
gene 263592..264263
/locus_tag="Tola_0233"
/db_xref="GeneID:7885746"
CDS 263592..264263
/locus_tag="Tola_0233"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: son:SO_A0180 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891449.1"
/db_xref="GI:237807009"
/db_xref="GeneID:7885746"
/translation="MYYSLLAEQERIMWQKAGGLLLVSLLAGCAQEAASPVLQPQGEY
RLLPLETTRRQVDELLQGKPETVIAVQTKPNEVTPPVLFALAYQLYQQQHYHDAMFWF
YTAQLRARSDANKSLDPSVQQGVTKLSEQFGTGISAYALSHPAEMERAMVQALRWDKT
AQRRYNPRWVALHGSEVQTSREYAFLPMERWPQIDQLTHREYARGFAKLMVSLRGPSG
FSLSD"
gene complement(264240..265127)
/locus_tag="Tola_0234"
/db_xref="GeneID:7885747"
CDS complement(264240..265127)
/locus_tag="Tola_0234"
/inference="protein motif:PFAM:PF00892"
/note="PFAM: protein of unknown function DUF6
transmembrane;
KEGG: bbr:BB1892 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891450.1"
/db_xref="GI:237807010"
/db_xref="InterPro:IPR000620"
/db_xref="GeneID:7885747"
/translation="MNQSDYLTGLLLAILAATGFACKAIFVKLAYRYGVDGTTLVTIR
LLLVLPLIATMRLLRKSPATALSWHDRGMIILLGLLGYYLSSLLDFLGLETVSASIER
LILCLYPTLTVLLSAWLMKTSISRRMWSAMALTYCGMVLVLTPDFAGARLDLLGIFFV
VASTVTYAFYLTWSPAVIRRIGAMRFAELGLTISALAMFVHYLLTRPVETLLHQPLPV
WGYGMIMALVATVLPIYALAAAMARIGAGKTALIGSVGPILTIFLSIGILDEHLSPVQ
WAGVCVVLTGIWLVGQRKT"
misc_feature complement(264258..264635)
/locus_tag="Tola_0234"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:144477"
gene complement(265131..265850)
/locus_tag="Tola_0235"
/db_xref="GeneID:7885748"
CDS complement(265131..265850)
/locus_tag="Tola_0235"
/inference="protein motif:TFAM:TIGR01549"
/note="TIGRFAM: HAD-superfamily hydrolase, subfamily IA,
variant 1;
PFAM: Haloacid dehalogenase domain protein hydrolase;
KEGG: aha:AHA_0477 HAD-superfamily hydrolase, subfamily
IA, variant 1 family protein"
/codon_start=1
/transl_table=11
/product="HAD-superfamily hydrolase"
/protein_id="YP_002891451.1"
/db_xref="GI:237807011"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006439"
/db_xref="GeneID:7885748"
/translation="MQFFRRLQDIRAISFDLDDTLYDNRPVIENAEQWMVEHMRDQYL
ASAMYDRAWWLQLKHELQKADPSLHDDVSRCRLMMLEVGLQRGGMPIEEAQAEAKRCF
AEFLEVRSRVTVPDASIEVLKQLSRHFPLVVITNGNVLLERIGLDGHFKHVLKAGNGR
KMKPAPDMFRMMAAQLKLKPQQILHVGDDVTTDVFGAIRNGYQAAWVNAQGQDWRTLH
TLPHLMLQDIRDLLKLLPEAK"
misc_feature complement(265146..265850)
/locus_tag="Tola_0235"
/note="flavin mononucleotide phosphatase; Provisional;
Region: PRK10748"
/db_xref="CDD:182696"
misc_feature complement(265230..265523)
/locus_tag="Tola_0235"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature complement(265446..265448)
/locus_tag="Tola_0235"
/note="motif II; other site"
/db_xref="CDD:119389"
gene complement(265917..266864)
/locus_tag="Tola_0236"
/db_xref="GeneID:7885749"
CDS complement(265917..266864)
/locus_tag="Tola_0236"
/inference="protein motif:PFAM:PF03466"
/note="PFAM: LysR substrate-binding; regulatory protein
LysR;
KEGG: cti:RALTA_B1246 putative transcriptional regulator,
LysR family"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002891452.1"
/db_xref="GI:237807012"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:7885749"
/translation="MNVRFLETFLWVARLNSFRLTAEKLFTTQASISNRIAVLEEELD
VKLFVRDSKGVRLTPDGEKVREYAEQIVGKAHALRMSLSQANGYEGKVRIGAIDSVVH
TWFIELISWITEHYPHLEVEISVDGARGLANQLQKGYLDIAFQADQIRLESIRNLELA
RYPMRWIVAANSPYNRQFTSLQELAKERLITFVANSRPHQDILSLLHVNGITSPRVSC
VNSFAAMIRLIEDGFGIGVIPPALVREQLANGSLIILNIDNTQPGSLSMLTQAASWRT
GPGLDHCEAIVRQAQHIVQRFCKIIGPERGIAANNSAPT"
misc_feature complement(265989..266855)
/locus_tag="Tola_0236"
/note="pca operon transcription factor PcaQ; Region:
TF_pcaQ; TIGR02424"
/db_xref="CDD:162852"
misc_feature complement(266679..266855)
/locus_tag="Tola_0236"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(266079..266594)
/locus_tag="Tola_0236"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cd05466"
/db_xref="CDD:176102"
misc_feature complement(order(266172..266177,266181..266186,
266202..266210,266211..266216,266490..266510,
266514..266516,266526..266528,266535..266540,
266544..266549))
/locus_tag="Tola_0236"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 267112..268413
/locus_tag="Tola_0237"
/db_xref="GeneID:7885750"
CDS 267112..268413
/locus_tag="Tola_0237"
/inference="protein motif:TFAM:TIGR00710"
/note="TIGRFAM: drug resistance transporter, Bcr/CflA
subfamily;
PFAM: major facilitator superfamily MFS_1; General
substrate transporter;
KEGG: ppr:PBPRA3006 multidrug resistance protein"
/codon_start=1
/transl_table=11
/product="Bcr/CflA subfamily drug resistance transporter"
/protein_id="YP_002891453.1"
/db_xref="GI:237807013"
/db_xref="InterPro:IPR001411"
/db_xref="InterPro:IPR004812"
/db_xref="InterPro:IPR005828"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:7885750"
/translation="MSSDSSSSAYYKDTLTIQQPPIIQQKALSRREKWIPVIYACLLI
AVGQTGMSLLLPALPAMQQDLHVSSQMTQWLVSAYLLGFGPSQLFYGPLSDMYGRRPV
LLAGLMITFSGILLCLFAHESATLIILGRVLQGIGAGCTSVIARVSLRDRYEGAHLRQ
AMAYFGIVMAFVPTITPLAGGYLTTHFSWISIFFTMAGYLGLLWVLLFYRFEETHAPE
PAEDRAHAADFVHQYWLLLKSDHFRCYSGVVSIQYALNIFSISVMPFIMQIMVGMSAD
TYGRWTLLPAVSLVLGGVLASKTRHYFSKESVLQAAAALQLISGLSMLLLPHTALLMM
LGLSLFAFGNGVAFPNALSSLLEPYKRTAGTATALAGASQMLIASFSSALLVSLGITS
ILGLGMVILLGSSVLLYLTRHARDTVPASDDWHSHHHPVHH"
misc_feature 267220..268335
/locus_tag="Tola_0237"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 267235..268350
/locus_tag="Tola_0237"
/note="multidrug resistance protein D; Provisional;
Region: emrD; PRK11652"
/db_xref="CDD:183259"
misc_feature order(267262..267264,267271..267279,267283..267288,
267337..267339,267346..267351,267358..267360,
267370..267375,267379..267384,267523..267528,
267535..267540,267547..267552,267559..267561,
267595..267600,267607..267612,267628..267630,
267868..267870,267877..267882,267889..267894,
267901..267903,267943..267945,267955..267957,
267967..267969,267976..267978,267988..267990,
268132..268134,268141..268146,268153..268155,
268165..268170,268177..268179,268210..268215,
268222..268227,268234..268239,268246..268248)
/locus_tag="Tola_0237"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 268540..268980
/locus_tag="Tola_0238"
/db_xref="GeneID:7885751"
CDS 268540..268980
/locus_tag="Tola_0238"
/inference="protein motif:TFAM:TIGR00256"
/note="TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase;
PFAM: D-tyrosyl-tRNA(Tyr) deacylase;
KEGG: aha:AHA_0281 D-tyrosyl-tRNA(Tyr) deacylase"
/codon_start=1
/transl_table=11
/product="D-tyrosyl-tRNA(Tyr) deacylase"
/protein_id="YP_002891454.1"
/db_xref="GI:237807014"
/db_xref="InterPro:IPR003732"
/db_xref="GeneID:7885751"
/translation="MIALIQRVSEARVVVDGAVTGEISNGLLVLLGVERDDDVAKADK
LAHRVAGYRVFSDADGKMNLNVQQVNGSILVVSQFTLAADTRKGMRASFAERNADPAV
AEALYEHFIAQIAGKEIPVASGRFAADMQVSLVNDGPVTFWLQV"
misc_feature 268540..268977
/locus_tag="Tola_0238"
/note="D-Tyrosyl-tRNAtyr deacylases; a class of
tRNA-dependent hydrolases which are capable of hydrolyzing
the ester bond of D-Tyrosyl-tRNA reducing the level of
cellular D-Tyrosine while recycling the peptidyl-tRNA;
found in bacteria and in eukaryotes but not...; Region:
Dtyr_deacylase; cd00563"
/db_xref="CDD:29648"
misc_feature order(268558..268560,268768..268782,268816..268818,
268963..268965)
/locus_tag="Tola_0238"
/note="putative active site [active]"
/db_xref="CDD:29648"
misc_feature order(268669..268671,268678..268686,268690..268701,
268768..268773,268777..268782,268786..268794,
268798..268812,268816..268818,268921..268974)
/locus_tag="Tola_0238"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29648"
misc_feature order(268681..268683,268696..268698,268798..268800,
268807..268809)
/locus_tag="Tola_0238"
/note="putative tRNAtyr binding site [nucleotide binding];
other site"
/db_xref="CDD:29648"
gene complement(268934..269641)
/locus_tag="Tola_0239"
/db_xref="GeneID:7885752"
CDS complement(268934..269641)
/locus_tag="Tola_0239"
/inference="protein motif:PFAM:PF08242"
/note="PFAM: Methyltransferase type 12; Spermine synthase;
KEGG: aha:AHA_0280 hypothetical protein"
/codon_start=1
/transl_table=11
/product="type 12 methyltransferase"
/protein_id="YP_002891455.1"
/db_xref="GI:237807015"
/db_xref="InterPro:IPR001045"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:7885752"
/translation="MSNIPFEEFDVAAATSTGALIYWERNGEQLLEIRADRHFRWLLL
DGVVQSVLQQATPGELCLPHQRILQALMPAQAAQVLHLGLGGGDLLRWLHHRYPGVQQ
TAIDLNAQVIDIYQRFFQQEEQPHLHCQDAFAWLGSGHQQYDLILIDLFSDDGSPAAL
FQSATYEHLQQHIAPDGRVIVNLLPRTEQEWQQVQHLLAGCGKVHSLRIANYRNYLIW
TEPKPAARKSPVRHSPD"
misc_feature complement(<269096..>269356)
/locus_tag="Tola_0239"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cl16911"
/db_xref="CDD:213141"
gene complement(269638..271677)
/locus_tag="Tola_0240"
/db_xref="GeneID:7885753"
CDS complement(269638..271677)
/locus_tag="Tola_0240"
/inference="protein motif:PFAM:PF05170"
/note="PFAM: AsmA family protein;
KEGG: asa:ASA_4114 hypothetical protein"
/codon_start=1
/transl_table=11
/product="AsmA family protein"
/protein_id="YP_002891456.1"
/db_xref="GI:237807016"
/db_xref="InterPro:IPR002345"
/db_xref="InterPro:IPR007844"
/db_xref="GeneID:7885753"
/translation="MAFFMHRAFRWFLYTILALVAAIWLTLGLLKPEHLKGPFVAWVQ
QQTGLPLEIGKLNYNPLYPNIVLAENVTLGPDIKIGKIYLEIAGGSWWQRQLHIAHLD
IINPQITWRPGLTLPQPLRQLQVDDLTIDKLQFSWPNGSLEGGSLHLTNWQPIRNGVV
IPLTEVNFDARADRLQYASLSLGKTRIEGTLTAEKLSVSDLQSDLFHGGMAAELTWDL
KNNRIDFQQLALANWQLDLQTFPALPLALPQIFADQVTLENVSAIDLSKRFALNQATG
TLEKLQWQPGQLPAFEYQGKLGEYTNGLFQLAEMQGEGRLRAEDWQVQLTGEAYAGKF
SAELEGTRQPATLTIHELQLSDMQPELHPGWREWLATQPFQQVNLRRLDISHLSLISF
DDSVPLTMKWLDLFLTDLRWTPQGIQSSNHKARLEGSWLELVWQTLVSRKTEFQAELA
ENKIQLEHFNTQLEESDFNISGQWGLDADTPHQLKLSLKKFDLEQLSDMLGPRYPFAG
KSDLTLDLQAKGKDLTTIRQSLQGNATLDVLDLFVDGLKLDTYLDEQLTPKAPAPQSF
EQLIGKLRGGDTAFNHVHLQLRADKGALDFSGSAFESITHLIGVKQGFDLGKQQWQLQ
LGLLNEQNKPELLGSMSGELTTPQLRFRLPANTVASWPTKPISYPPQGRQGSLRE"
misc_feature complement(270019..271668)
/locus_tag="Tola_0240"
/note="Uncharacterized protein involved in outer membrane
biogenesis [Cell envelope biogenesis, outer membrane];
Region: AsmA; COG2982"
/db_xref="CDD:32801"
misc_feature complement(<269896..270357)
/locus_tag="Tola_0240"
/note="AsmA-like C-terminal region; Region: AsmA_2;
pfam13502"
/db_xref="CDD:205680"
gene complement(271727..273796)
/locus_tag="Tola_0241"
/db_xref="GeneID:7885754"
CDS complement(271727..273796)
/locus_tag="Tola_0241"
/inference="protein motif:TFAM:TIGR00643"
/note="catalyzes branch migration in Holliday junction
intermediates"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase RecG"
/protein_id="YP_002891457.1"
/db_xref="GI:237807017"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR004365"
/db_xref="InterPro:IPR004609"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:7885754"
/translation="MELSAIPVSMLKGVGSKLAEKLAHLRLHTVQDLLFHLPLRYEDR
TRLYPIAELSADHACTTEGVIQSCDIQQGKRRMLLCRISDGNGSLTLRFFHFTAGQKN
ALAIGRRIRCFGEIKRGLHGFEIVHPEYKLLDDDAPLDTDATLTPVYPTTEGLRQASL
RNLTDQALQLLKENGVKELLPEGLYPRQLSLSDALLLLHRPPPDISLAQLENGQHPAQ
QRLALEELIAHHLTVLQLRYSVQQHQARPLATDWSLCEQLLAHLPFKPTGAQQRVVSE
ISHDLTLPHPMMRLVQGDVGSGKTLVAALAALQVIAHGGQVVLMAPTELLAEQHANNF
SNWLTPLGIETGWLAGKIKGKAREKQLEAIRSGQVKMVVGTHAVFQDQVEFQQLLLVI
VDEQHRFGVHQRLALREKGAQDGVYPHQLIMTATPIPRTLAMTIYADLDTSIIDELPP
GRTPITTVALPDTRRETVIERVRQACLEGRQAYWVCTLIEESEVLECQAAENTAEELQ
LLLPELHIGLVHGRMKPAEKQRVMQEFKEGILHLLVATTVIEVGVDVPNASLMIIENP
ERLGLAQLHQLRGRVGRGSVASHCVLLYHAPLSKTAQQRLGVLRDSNDGFVIAQKDLE
LRGPGEMLGAKQTGLADLKIADLIRDQALIPQVQQLAQRIFQQYPACVTPLIRRWFGE
RDDYSQA"
misc_feature complement(271730..273796)
/locus_tag="Tola_0241"
/note="ATP-dependent DNA helicase RecG; Provisional;
Region: PRK10917"
/db_xref="CDD:182836"
misc_feature complement(<273695..>273790)
/locus_tag="Tola_0241"
/note="Y-family of DNA polymerases; Region: PolY; cl12025"
/db_xref="CDD:209419"
misc_feature complement(273404..273619)
/locus_tag="Tola_0241"
/note="RecG_wedge_OBF: A subfamily of OB folds
corresponding to the OB fold found in the N-terminal
(wedge) domain of Escherichia coli RecG. RecG is a
branched-DNA-specific helicase, which catalyzes the
interconversion of a DNA replication fork to a...; Region:
RecG_wedge_OBF; cd04488"
/db_xref="CDD:72960"
misc_feature complement(order(273458..273460,273464..273466,
273470..273472,273617..273619))
/locus_tag="Tola_0241"
/note="generic binding surface II; other site"
/db_xref="CDD:72960"
misc_feature complement(order(273422..273424,273500..273502,
273515..273517,273566..273568,273584..273586))
/locus_tag="Tola_0241"
/note="ssDNA binding site; other site"
/db_xref="CDD:72960"
misc_feature complement(272516..272932)
/locus_tag="Tola_0241"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature complement(272897..272911)
/locus_tag="Tola_0241"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature complement(272606..272617)
/locus_tag="Tola_0241"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature complement(272018..272416)
/locus_tag="Tola_0241"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature complement(order(272153..272161,272234..272239,
272303..272308,272333..272338))
/locus_tag="Tola_0241"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature complement(order(272048..272050,272057..272059,
272069..272071,272135..272137))
/locus_tag="Tola_0241"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
gene 274302..274856
/locus_tag="Tola_0242"
/db_xref="GeneID:7885755"
CDS 274302..274856
/locus_tag="Tola_0242"
/inference="protein motif:TFAM:TIGR00821"
/note="TIGRFAM: PTS system, glucitol/sorbitol-specific,
IIC subunit;
PFAM: PTS system protein II sorbitol-specific factor;
KEGG: asa:ASA_3583 PTS system, glucitol/sorbitol-specific
IIBC component"
/codon_start=1
/transl_table=11
/product="PTS system glucitol/sorbitol-specific
transporter subunit IIC"
/protein_id="YP_002891458.1"
/db_xref="GI:237807018"
/db_xref="InterPro:IPR004699"
/db_xref="GeneID:7885755"
/translation="MDLVIHAAEWFIGLFQKGGEVFVSMVTGILPLLISLMVAMNALI
RFIGQERVERLAQKCAGNPVSRYLILPVVGTFVFMNPMTLSLGRFMPERYKPSYYAAA
SYSCHSMNGLFPHINPGELFVYLGIANGLTTLGLPLAPLAISYLFVGMISNFFRGWVT
DLTTAFVERQQNIRLSTEVHMHAN"
misc_feature 274302..274841
/locus_tag="Tola_0242"
/note="PTS system enzyme II sorbitol-specific factor;
Region: EII-GUT; cl01515"
/db_xref="CDD:141246"
gene 274878..275861
/locus_tag="Tola_0243"
/db_xref="GeneID:7885756"
CDS 274878..275861
/locus_tag="Tola_0243"
/EC_number="2.7.1.69"
/inference="protein motif:TFAM:TIGR00825"
/note="KEGG: asa:ASA_3582 PTS system,
glucitol/sorbitol-specific IIBC component;
TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC
subunit;
PFAM: Sorbitol phosphotransferase protein II domain
protein"
/codon_start=1
/transl_table=11
/product="PTS system glucitol/sorbitol-specific
transporter subunit IIBC"
/protein_id="YP_002891459.1"
/db_xref="GI:237807019"
/db_xref="InterPro:IPR004702"
/db_xref="InterPro:IPR011618"
/db_xref="InterPro:IPR011638"
/db_xref="GeneID:7885756"
/translation="MANSLVITKGNGGWGGPLTIPVDKNKKIIYITAGTRPDIVDRMV
ELTGMEAVDGFKSSVPDTETAVAIIDCGGTLRCGLYPKKRIPTVNIHSTGKSGPMADY
IMEDIYVSGVRPDNIQLQDQAGVAPSRPAAAPAQEEYRQYDSSKKLSEQSDGLLAKIG
IGMGSVMATFFQSGRETIDTVLKSILPFMAFVSMLIGVIIASGIGDVIAHALIPLAKS
PIGLITLALICSFPFLSPFLGPGAVIAQVIGVLVGTQIGMGNIPPQLALPALFAINAQ
AACDFIPVGLSLAEAKPKTVQIGVPSVLYSRFLTGAPTVLLAWFVSFFIYQ"
misc_feature 274884..275858
/locus_tag="Tola_0243"
/note="PTS system, glucitol/sorbitol-specific, IIBC
component; Region: EIIBC-GUT; TIGR00825"
/db_xref="CDD:129905"
misc_feature 274884..275414
/locus_tag="Tola_0243"
/note="Sorbitol phosphotransferase enzyme II N-terminus;
Region: EIIBC-GUT_N; pfam03612"
/db_xref="CDD:190689"
misc_feature 275577..275855
/locus_tag="Tola_0243"
/note="Sorbitol phosphotransferase enzyme II C-terminus;
Region: EIIBC-GUT_C; pfam07663"
/db_xref="CDD:148973"
gene 275880..276245
/locus_tag="Tola_0244"
/db_xref="GeneID:7884621"
CDS 275880..276245
/locus_tag="Tola_0244"
/inference="protein motif:PFAM:PF03829"
/note="PFAM: PTS system glucitol/sorbitol-specific IIA
component;
KEGG: asa:ASA_3581 PTS system, glucitol/sorbitol-specific
IIA component"
/codon_start=1
/transl_table=11
/product="PTS system glucitol/sorbitol-specific
transporter subunit IIA"
/protein_id="YP_002891460.1"
/db_xref="GI:237807020"
/db_xref="InterPro:IPR004716"
/db_xref="GeneID:7884621"
/translation="MTMLYRTQVTHIGEYAADALDDNMMILFNDNAPADVADYCFIHP
AADLTGEIKTGGQFVLGASRYPITAVGDVVNQNLAELGHITIRFDGGAEAEYPGTVHV
AGQCPEALVLGTELIFQTE"
misc_feature 275880..276230
/locus_tag="Tola_0244"
/note="PTS system glucitol/sorbitol-specific IIA
component; Region: PTSIIA_gutA; pfam03829"
/db_xref="CDD:146453"
gene 276328..277104
/locus_tag="Tola_0245"
/db_xref="GeneID:7884622"
CDS 276328..277104
/locus_tag="Tola_0245"
/inference="protein motif:PFAM:PF00106"
/note="catalyzes the conversion of sorbitol 6-phosphate
into fructose 6-phosphate"
/codon_start=1
/transl_table=11
/product="sorbitol-6-phosphate dehydrogenase"
/protein_id="YP_002891461.1"
/db_xref="GI:237807021"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="GeneID:7884622"
/translation="MSKVALVVGGGRNLGAFLCNGLAAAGYKVAVADLDGQSAQETAT
AIAEQFGADNVMAVQANSTDEADVARMVGAIEDRFGRIDVMVYNAGVAQAARIDSFPL
DAWKRSIEVNLTGYFLCARAVSKIMMRQNFGRIIQINSKSGKVGSKHNSGYSAAKFGG
VGLTQSLALDLADYNITVHSLMLGNLLKSPMFQSLLPQYAKKLGIPEDQVEQTYIDKV
PLKRGCDYQDVLNVLKFYASEEASYCTGQMINITGGQVMF"
misc_feature 276328..277101
/locus_tag="Tola_0245"
/note="sorbitol-6-phosphate dehydrogenase; Provisional;
Region: PRK12384"
/db_xref="CDD:183489"
misc_feature 276328..277098
/locus_tag="Tola_0245"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(276352..276354,276358..276363,276367..276369,
276424..276432,276589..276597,276739..276747,
276784..276786,276796..276798,276874..276885)
/locus_tag="Tola_0245"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(276661..276663,276745..276747,276784..276786,
276796..276798)
/locus_tag="Tola_0245"
/note="active site"
/db_xref="CDD:187535"
gene 277210..277566
/locus_tag="Tola_0246"
/db_xref="GeneID:7884623"
CDS 277210..277566
/locus_tag="Tola_0246"
/inference="protein motif:PFAM:PF06923"
/note="PFAM: Glucitol operon activator;
KEGG: asa:ASA_3579 glucitol/sorbitol operon activator"
/codon_start=1
/transl_table=11
/product="glucitol operon activator"
/protein_id="YP_002891462.1"
/db_xref="GI:237807022"
/db_xref="InterPro:IPR009693"
/db_xref="GeneID:7884623"
/translation="MDATYILIVCAVIAWSLQIATGFLQMRAFNRMLQEMSLKGVVKI
GKTSSRWKPKTLVVLAHDANNVIVDASIMKGLTIFARPKKLSAVIHARIPLSEKILSE
LEPSTREAIICALSTK"
misc_feature 277219..277542
/locus_tag="Tola_0246"
/note="Glucitol operon activator protein (GutM); Region:
GutM; pfam06923"
/db_xref="CDD:148505"
gene 277646..278410
/gene="srlR"
/locus_tag="Tola_0247"
/db_xref="GeneID:7884624"
CDS 277646..278410
/gene="srlR"
/locus_tag="Tola_0247"
/inference="protein motif:PFAM:PF08220"
/note="regulates genes involved in glucitol utilization"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor SrlR"
/protein_id="YP_002891463.1"
/db_xref="GI:237807023"
/db_xref="InterPro:IPR001034"
/db_xref="InterPro:IPR014036"
/db_xref="GeneID:7884624"
/translation="MSVGIRREMLVRYLREHGRTTVNDLASHFNITGATVRSDLRYLE
QASLVTRRYGGAEAVSHPVAEDRTMDEKTALNQNIKQRIGAKAASLVHDGESIILDNG
STTLQMVPWLVERVALTVMTNSLLIINEAVSRDCNMNLLMPGGTYRKRSSSFHGGLAE
QAFRAFTFDKLFIGADGFDIEQGTTTFNEAYQVSQAMCQAAKQIIVVTDSSKFGRKTP
NVVVPIDKIDIVITDHGISEADQAALEQRGIQVLLV"
misc_feature 277646..278407
/gene="srlR"
/locus_tag="Tola_0247"
/note="DNA-bindng transcriptional repressor SrlR;
Provisional; Region: srlR; PRK10434"
/db_xref="CDD:182457"
misc_feature 277646..>277810
/gene="srlR"
/locus_tag="Tola_0247"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature order(277655..277663,277703..277705,277709..277714,
277739..277750,277754..277759,277766..277771,
277775..277780,277796..277804)
/gene="srlR"
/locus_tag="Tola_0247"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(277703..277705,277715..277717)
/gene="srlR"
/locus_tag="Tola_0247"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
misc_feature 277865..278299
/gene="srlR"
/locus_tag="Tola_0247"
/note="DeoR C terminal sensor domain; Region: DeoRC;
pfam00455"
/db_xref="CDD:201239"
gene complement(278407..278862)
/locus_tag="Tola_0248"
/db_xref="GeneID:7884625"
CDS complement(278407..278862)
/locus_tag="Tola_0248"
/inference="protein motif:PFAM:PF01047"
/note="PFAM: regulatory protein MarR;
SMART: regulatory protein MarR;
KEGG: sbm:Shew185_3498 MarR family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="transcriptional regulator, MarR family"
/protein_id="YP_002891464.1"
/db_xref="GI:237807024"
/db_xref="InterPro:IPR000835"
/db_xref="InterPro:IPR001664"
/db_xref="GeneID:7884625"
/translation="MTDDNMPDLLRLDNQLCFALYSASNAIVRAYRPLLDKLDITYPQ
YLVLLVLWQQDEISLKQLGEQLFLDSGTLTPLLKRLESKGLIRRERNERDERLRVLKL
TAEGNALKKLAANIPVQMRDQLRLSDTQLQLLKAHCELVQKQLHEQDDC"
misc_feature complement(278434..278796)
/locus_tag="Tola_0248"
/note="Transcriptional regulators [Transcription]; Region:
MarR; COG1846"
/db_xref="CDD:32031"
misc_feature complement(<278605..278745)
/locus_tag="Tola_0248"
/note="MarR family; Region: MarR; pfam01047"
/db_xref="CDD:201571"
gene complement(278999..279796)
/locus_tag="Tola_0249"
/db_xref="GeneID:7884626"
CDS complement(278999..279796)
/locus_tag="Tola_0249"
/inference="protein motif:TFAM:TIGR00363"
/note="TIGRFAM: lipoprotein, YaeC family;
PFAM: NLPA lipoprotein;
KEGG: asa:ASA_3380 ABC-type methionine transporter,
periplasmic binding protein"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_002891465.1"
/db_xref="GI:237807025"
/db_xref="InterPro:IPR004478"
/db_xref="InterPro:IPR004872"
/db_xref="GeneID:7884626"
/translation="MNLFSKAILSAAILGIALTGCGEKKDNHLKVGAISGAETQVAEE
AAKIAKEKFGLEVEIVQFSDFATPNVALNDGSIDVNAFQHKPYLDSQIKDRGFKLVAV
GNTFVYPIAGYSKKIKNISELKEGTQVAVPNDPTNLGRSLLLLQQQGLLKLKEGSGLS
ATVLDIVENPKNLKIVELEAAQLPRALEDVELAIINTVYASQVDLQPTRDGLFVEDKE
SPYVNLIVARENNQNDENVKNFVKAYQDEAVFKKASELFNGGVVKGW"
misc_feature complement(279002..279742)
/locus_tag="Tola_0249"
/note="NMT1-like family; Region: NMT1_2; cl15260"
/db_xref="CDD:212369"
gene complement(279856..280509)
/locus_tag="Tola_0250"
/db_xref="GeneID:7884627"
CDS complement(279856..280509)
/locus_tag="Tola_0250"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: aha:AHA_0914 D-methionine ABC transporter, permease
protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport system inner
membrane protein"
/protein_id="YP_002891466.1"
/db_xref="GI:237807026"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:7884627"
/translation="MFSSMHELLLLALGETLWMVFASALFGTILGVPLGVALHITKPG
QIAAHPIFNKVLGTVVNVGRSVPFIILLVAIIPLTRLIVGTSIGTNAAIVPLAIGAIP
FLARLVEGALMEIPAGLIEAAQAMGATHRQIIRKVMLPEALPGILNAIVITLVALVNY
SAMAGAIGGGGLGDVGIRYGYQRFDPAIMLITVAILVILVQLIQSIGERLVKRVDHR"
misc_feature complement(<280024..280464)
/locus_tag="Tola_0250"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(280024..280035,280054..280056,
280063..280068,280108..280110,280159..280161,
280168..280173,280183..280185,280189..280194,
280201..280203,280207..280209,280213..280218,
280282..280284,280288..280293,280300..280329,
280333..280344,280393..280395,280408..280413,
280420..280425))
/locus_tag="Tola_0250"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(280024..280035,280282..280326))
/locus_tag="Tola_0250"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(280087..280089,280099..280104,
280120..280158))
/locus_tag="Tola_0250"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(280490..281533)
/gene="metN"
/locus_tag="Tola_0251"
/db_xref="GeneID:7884628"
CDS complement(280490..281533)
/gene="metN"
/locus_tag="Tola_0251"
/inference="protein motif:TFAM:TIGR02314"
/note="part of the metNIQ transport system for methionine"
/codon_start=1
/transl_table=11
/product="DL-methionine transporter ATP-binding subunit"
/protein_id="YP_002891467.1"
/db_xref="GI:237807027"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR012692"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7884628"
/translation="MIKLSSLSKAYGEGKNAFYALKGIELDVPAGQIVGVIGASGAGK
STLIRCVNLLERPTQGRVEVDGVDLTALDDQALTLARRNIGMIFQHFNLLSSRTVFEN
VALPLELANWPKEKITARVNELLDLVGLTHRAKAYPSQLSGGQKQRVAIARALGPAPK
VLLCDEATSALDPQTTQSILALLKEINQKLGITILLITHEMGVVKSICDSVALLDQGT
IIEQGEVGWFFAHAQAPLAKEFIRSSLHLEIPAPYRERLQKAPADGFIPLLRLGFSGN
TIDTPAISHASRQFGIDVNILSASIEQIGHSRFGFLLVELLGDAAAQQTTIAYLQQQQ
IDVEVLGYVQQHA"
misc_feature complement(280505..281533)
/gene="metN"
/locus_tag="Tola_0251"
/note="DL-methionine transporter ATP-binding subunit;
Provisional; Region: metN; PRK11153"
/db_xref="CDD:183001"
misc_feature complement(280835..281533)
/gene="metN"
/locus_tag="Tola_0251"
/note="MetN (also known as YusC) is an ABC-type
transporter encoded by metN of the metNPQ operon in
Bacillus subtilis that is involved in methionine
transport. Other members of this system include the MetP
permease and the MetQ substrate binding protein. ABC...;
Region: ABC_MetN_methionine_transporter; cd03258"
/db_xref="CDD:73017"
misc_feature complement(281399..281422)
/gene="metN"
/locus_tag="Tola_0251"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73017"
misc_feature complement(order(280937..280939,281036..281041,
281267..281269,281396..281404,281408..281413))
/gene="metN"
/locus_tag="Tola_0251"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73017"
misc_feature complement(281267..281278)
/gene="metN"
/locus_tag="Tola_0251"
/note="Q-loop/lid; other site"
/db_xref="CDD:73017"
misc_feature complement(281084..281113)
/gene="metN"
/locus_tag="Tola_0251"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73017"
misc_feature complement(281036..281053)
/gene="metN"
/locus_tag="Tola_0251"
/note="Walker B; other site"
/db_xref="CDD:73017"
misc_feature complement(281018..281029)
/gene="metN"
/locus_tag="Tola_0251"
/note="D-loop; other site"
/db_xref="CDD:73017"
misc_feature complement(280931..280951)
/gene="metN"
/locus_tag="Tola_0251"
/note="H-loop/switch region; other site"
/db_xref="CDD:73017"
misc_feature complement(280514..280735)
/gene="metN"
/locus_tag="Tola_0251"
/note="NIL domain; Region: NIL; pfam09383"
/db_xref="CDD:204224"
gene complement(281756..282796)
/locus_tag="Tola_0252"
/db_xref="GeneID:7884629"
CDS complement(281756..282796)
/locus_tag="Tola_0252"
/inference="similar to AA sequence:KEGG:Patl_2280"
/note="KEGG: pat:Patl_2280 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891468.1"
/db_xref="GI:237807028"
/db_xref="GeneID:7884629"
/translation="MELKQRHLQQACNQGLLTPEQVTPLWNYLQNLPADSATFRATHI
LFYLGGLIAIAAMSLFMTLGWDAFGGIGILLIACGYGVAACLVADWLLWRQRQPIPAG
LLAALAVTMVPLAIYGLQAQLGYWDDATHTEYRDFHRYIDWRWLMMELGTLLFGTILL
WRYRLPFMVMPLAVVLWYLSMDLTPFLFQEEDYSWLRRQQVSMVVGLLMLGLAFYIDL
RTRHTLDFAWWLYLFGLMAFWGGLSMQHSDSELSKLGYCLINLLLITVGGMIGRRVFV
IFGGMGVAGYLGYLAWDLFEDSLTFPFVLSLIGLGIIWLGLLWQRHEAQIQRQLQRHL
PAAWRELLAQRR"
gene 283089..284132
/locus_tag="Tola_0253"
/db_xref="GeneID:7884630"
CDS 283089..284132
/locus_tag="Tola_0253"
/inference="protein motif:TFAM:TIGR00904"
/note="functions in MreBCD complex in some organisms"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein MreB"
/protein_id="YP_002891469.1"
/db_xref="GI:237807029"
/db_xref="InterPro:IPR004753"
/db_xref="GeneID:7884630"
/translation="MFKKLRGLFSNDLSIDLGTANTLIYVKGKGIVLNEPSVVAIRQE
RGGTAKSVAAVGHAAKMMLGRTPGNIAAIRPMKDGVIADFSVTEKMLQHFIKQVHENN
LMRPSPRVLVCIPCGATQVERRAIKESAQGAGAREVYLIEEPMAAAIGAGLPVSEATG
SMVVDIGGGTTEVAIISLNGVVYSSSVRIGGDRFDEAIISYVRRNYGSLIGESTAERI
KHEIGSAYPGEEVREIEVRGRNLAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALE
QSPPELASDISEKGMVLTGGGALLRNLDRLLMEHTGIPVVVAEDPLTCVARGGGRALE
LIDMHGGDLFHYE"
misc_feature 283104..284120
/locus_tag="Tola_0253"
/note="rod shape-determining protein MreB; Provisional;
Region: PRK13927"
/db_xref="CDD:184401"
misc_feature 283125..284099
/locus_tag="Tola_0253"
/note="MreB and similar proteins; Region: MreB_like;
cd10225"
/db_xref="CDD:212668"
misc_feature order(283134..283136,283140..283151,283323..283325,
283515..283517,283581..283583,283587..283598,
283659..283664,283734..283736,283743..283748,
283971..283979,283983..283988,284052..284054,
284061..284063)
/locus_tag="Tola_0253"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212668"
misc_feature order(283134..283136,283581..283583)
/locus_tag="Tola_0253"
/note="Mg binding site [ion binding]; other site"
/db_xref="CDD:212668"
misc_feature order(283212..283214,283272..283274,283296..283298,
283560..283562,283566..283568,283626..283628,
283722..283724,283728..283730,283797..283799,
283821..283823,283830..283832,283920..283922,
283929..283931,284025..284027,284097..284099)
/locus_tag="Tola_0253"
/note="putative protofilament interaction site
[polypeptide binding]; other site"
/db_xref="CDD:212668"
misc_feature order(283542..283547,283569..283571,283947..283955,
284028..284030,284034..284036,284043..284045)
/locus_tag="Tola_0253"
/note="RodZ interaction site [polypeptide binding]; other
site"
/db_xref="CDD:212668"
gene 284181..285134
/locus_tag="Tola_0254"
/db_xref="GeneID:7884631"
CDS 284181..285134
/locus_tag="Tola_0254"
/inference="protein motif:TFAM:TIGR00219"
/note="TIGRFAM: rod shape-determining protein MreC;
PFAM: Rod shape-determining protein MreC;
KEGG: aha:AHA_0401 rod shape-determining protein MreC"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein MreC"
/protein_id="YP_002891470.1"
/db_xref="GI:237807030"
/db_xref="InterPro:IPR005223"
/db_xref="InterPro:IPR007221"
/db_xref="GeneID:7884631"
/translation="MRTIFGRGPSLQLRLFITVLLSLAGIVSDARFHLFDGMRLYINT
FASPLLHLASVPRDVVEEASLQLSSRSQLLKDNQQLQQQLFLLRSDLLRMAELSQENR
RLRELLGSPVTQDSRKLVARILSVDSDPFVYQVVIDKGVEHHVYEGQPVVNDQGVIGQ
VVSVGKTSSRVLLITDISHALPVRVLRNDLRAIASGTGNINELTLKNLPRNVDIKDGD
ILVTSGMGGHFPEGYPVAKVTRFANEEQSPFAEIKAEPLATLDRLRYVLLLWQDAKSM
GPLPVMSSAATVSAAQPAMSATDKNKSATASAEVPHQEGRQ"
misc_feature 284190..284996
/locus_tag="Tola_0254"
/note="rod shape-determining protein MreC; Provisional;
Region: PRK13922"
/db_xref="CDD:184397"
misc_feature 284544..284996
/locus_tag="Tola_0254"
/note="rod shape-determining protein MreC; Region: MreC;
pfam04085"
/db_xref="CDD:202883"
gene 285131..285622
/locus_tag="Tola_0255"
/db_xref="GeneID:7884632"
CDS 285131..285622
/locus_tag="Tola_0255"
/inference="protein motif:TFAM:TIGR03426"
/note="TIGRFAM: rod shape-determining protein MreD;
PFAM: Rod shape-determining protein MreD;
KEGG: asa:ASA_3935 rod shape-determining protein MreD"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein MreD"
/protein_id="YP_002891471.1"
/db_xref="GI:237807031"
/db_xref="InterPro:IPR007227"
/db_xref="GeneID:7884632"
/translation="MSGSLTGHGKGSIYLTLIVAIILTMVPLPVAIDMFRPDWVALVV
LYWVIALPHHLNVVSAWIVGLIMDILLGSTLGIHALSMAVISCVVAAQYQKIRNFSVW
QQALVMGSLIFVGQLLIFWVEHLFASPRLNTRFVWASLSSTLLWPSVYLFLRYIRRRF
NIR"
misc_feature 285152..285619
/locus_tag="Tola_0255"
/note="rod shape-determining protein MreD; Region: MreD;
cl01087"
/db_xref="CDD:212255"
gene 285628..286206
/locus_tag="Tola_0256"
/db_xref="GeneID:7884633"
CDS 285628..286206
/locus_tag="Tola_0256"
/inference="protein motif:TFAM:TIGR00172"
/note="TIGRFAM: maf protein;
PFAM: Maf family protein;
KEGG: aha:AHA_0403 septum formation protein Maf"
/codon_start=1
/transl_table=11
/product="maf protein"
/protein_id="YP_002891472.1"
/db_xref="GI:237807032"
/db_xref="InterPro:IPR003697"
/db_xref="GeneID:7884633"
/translation="MSASAALYLASASPRRRELLALLDYPFTVLSVDVEEQQQPDETP
ADYVQRLARDKSQAGWLACRGQKPVLGADTIVVFEQEVLEKPRDFADAQRILQLLSGN
THTVMTAVALSSEQGCEVVLVNSQVTFRKLTPEEISRYWQTGEPADKAGAYGIQGIGG
KFVSHLSGSYSAVVGLPLLETDLLLQKYCRHS"
misc_feature 285667..286185
/locus_tag="Tola_0256"
/note="Maf-like protein; Region: Maf; pfam02545"
/db_xref="CDD:202278"
misc_feature 285667..286182
/locus_tag="Tola_0256"
/note="Nucleotide binding protein Maf. Maf has been
implicated in inhibition of septum formation in
eukaryotes, bacteria and archaea, but homologs in
B.subtilis and S.cerevisiae are nonessential for cell
division. Maf has been predicted to be a nucleotide-
or...; Region: Maf; cd00555"
/db_xref="CDD:29954"
misc_feature order(285673..285675,285733..285735,285790..285792,
285844..285846,285880..285882)
/locus_tag="Tola_0256"
/note="active site"
/db_xref="CDD:29954"
misc_feature order(285772..285774,285979..285993)
/locus_tag="Tola_0256"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29954"
gene 286230..287699
/locus_tag="Tola_0257"
/db_xref="GeneID:7884634"
CDS 286230..287699
/locus_tag="Tola_0257"
/inference="protein motif:TFAM:TIGR00757"
/note="involved in the processing of the 5'end of 16S
rRNA"
/codon_start=1
/transl_table=11
/product="ribonuclease G"
/protein_id="YP_002891473.1"
/db_xref="GI:237807033"
/db_xref="InterPro:IPR003029"
/db_xref="InterPro:IPR004659"
/db_xref="GeneID:7884634"
/translation="MSTELLVNVTPSETRVALVDHGMLQEVHIERQAKRGIVGNIYKG
KISRVLPGMQAAFVDIGMDKAAFLHASDIVPHTECVDVKEKEHFQAGNIAELVRQGQD
IMVQVVKDPMGTKGARLTTDITLPSRYLVFMPGSAHVGVSQRIDSEEERERLKEIVSR
NVDELGGFIIRTAAEGIGEKELEQDTIFLKRLWRKVLERRQKYPTSHVLYAEWSLAFR
ILRDFVGDDLDKIRVDSRQTYEQLSHFTEEFVPEMIGKLDYYSGESPIFDLYDVENEI
QRALERKVELKSGGYLIIDQTEAMTTIDINTGAFVGHRNLEETIFNTNIEATAAIARQ
LRLRNLGGIIIIDFIDMQSEDHRRRVLQSLEQALAKDRAKTGVNGFSQLGLVEMTRKR
TRESLEHVLCSECPACKGRGRVKTVESVCYEILREILRVNRAYDADQFVVYASPAVAE
ALRGEESHSLAELEVFISKQVKVQAEPLYNQEQYDVVMM"
misc_feature 286230..287696
/locus_tag="Tola_0257"
/note="ribonuclease G; Provisional; Region: PRK11712"
/db_xref="CDD:183285"
misc_feature 286323..286613
/locus_tag="Tola_0257"
/note="S1_RNase_E: RNase E and RNase G, S1-like
RNA-binding domain. RNase E is an essential
endoribonuclease in the processing and degradation of RNA.
In addition to its role in mRNA degradation, RNase E has
also been implicated in the processing of rRNA, and...;
Region: S1_RNase_E; cd04453"
/db_xref="CDD:88419"
misc_feature order(286356..286358,286521..286523,286533..286535)
/locus_tag="Tola_0257"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:88419"
misc_feature order(286428..286430,286554..286556,286563..286565,
286572..286577,286605..286607)
/locus_tag="Tola_0257"
/note="oligonucleotide binding site [chemical binding];
other site"
/db_xref="CDD:88419"
gene 287754..291518
/locus_tag="Tola_0258"
/db_xref="GeneID:7884635"
CDS 287754..291518
/locus_tag="Tola_0258"
/inference="similar to AA sequence:KEGG:AHA_0405"
/note="KEGG: aha:AHA_0405 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891474.1"
/db_xref="GI:237807034"
/db_xref="InterPro:IPR011836"
/db_xref="GeneID:7884635"
/translation="MLLAVLVTALRFGLPDLQLHRDWVLKQFLPDTMSSASVAHIGWR
WQDYGLQLELRDVALQQQGAVPFELSAKQLQLHCNPFLQFWKTHGCLATLQADQLQLT
LQLPKAAASSSDSPGLNDLLPLLLEQVAQANITNSQIRLVRQQQLLAEFHIDQLYAEN
RADQHKLFSRISVAQQALVVPLLLQAELQGAARQDALQGHIYLATEPHAGKQPGALLP
TPLTANAQSIHGSLAFQLWLERQPGQWQSALLQLGLNRLGWQQAEQQHSLELQGGEIV
WQRHAGDWQLYSQGLQLHSNHQPWRSWQLQLKKQAEQYTGQMDPLLLDELTPLTGMFL
PVESAAAEALRTLMPQGRLSELRFSRDEAQDSWLFSGQLQQLQWQRWRMIPGLHDVDA
SFRLSPQGVALTLQQLKPQTWDLQPYFEKPWPVQTFSADLNWQKLSNGWALTADQVQL
KTDVVTTATQFRLSQEGTQPLFLALDSGVDLKDASQAHYYFPHGAMGEPVIKYLTNAL
QGGHAENARILWHGAFRDFPFKEKNGIFQAWVPLRDATFQFGAGWLPLREMSLDLLFE
NDRLDMQGDRALLGDASSPRLHAWFPKLAPGARLYIDADIAGTGEAVSDYLYRSPLQN
SVGSALQAVRIQKPLTGELKLDIPMDGTQVKVNGKVKLAGNSLYLPSLDLPLEQLQGE
LSFDDNKTAIEKLQATLWGQPLRVQYAGEQLANEYQVKLGLQGEWDSQRDKALPQLAH
QTLQGQANWQGALDLHLYKGGHYYYDAQLTSPLTALVLDLPAPYNKPSGRSWPLQVKI
SGNQRSSVINGSLNHEWQLQADWTPDKKQFRRFWLDNQIIERSAGPRLPFSVSAILSE
ADGSAWLDWWQRWPANGQHAVNQLFPSAGAIDVRVDKLHVADQLWRDIRLNMSPDRDG
SRIWLESSKAQGVIHLPASKKKPIRIDMARLYWADSGVDTKPAEPMSLATQRAWLARW
PDLLFSCQDCRYGGNTLGQFRGHLYPVKQGGEIRDLHWQVANSHFDGQAGWSIKNYQP
LSTLKGKFVSNNTEVFLGHFGFDPGLTGTKSQLDIDVSWPGALVQPRLSALDGQIRME
TGEGILREVKNTGGNRLLSLFSLNAIVSRISFDFRDIFGDGLYFKKITFSSKLERGVL
RNDDLVLESNSGELNGHGMVDLGQKTIDYQVTFSPTLTGGFGVATAFAITPITGIAVL
AATTILQPVFDVITQVSYSVKGDIAKPVITELGRKQEKVKLSAPKAKESK"
misc_feature 287757..291470
/locus_tag="Tola_0258"
/note="TIGR02099 family protein; Region: TIGR02099"
/db_xref="CDD:162702"
misc_feature 290718..291449
/locus_tag="Tola_0258"
/note="AsmA-like C-terminal region; Region: AsmA_2;
pfam13502"
/db_xref="CDD:205680"
gene 291518..292339
/locus_tag="Tola_0259"
/db_xref="GeneID:7884636"
CDS 291518..292339
/locus_tag="Tola_0259"
/inference="protein motif:PFAM:PF00795"
/note="PFAM: Nitrilase/cyanide hydratase and
apolipoprotein N-acyltransferase;
KEGG: asa:ASA_3930 beta-ureidopropionase"
/codon_start=1
/transl_table=11
/product="nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase"
/protein_id="YP_002891475.1"
/db_xref="GI:237807035"
/db_xref="InterPro:IPR001110"
/db_xref="InterPro:IPR003010"
/db_xref="GeneID:7884636"
/translation="MQLVALQINAQADWLSNRAQIASLLQRLPVERPCLVLLPENFAC
MGAPQDYQQLAEPVGSGPVQRQLSEWAKEFGLWLVAGSLPTLIPQQNRVHTTSLVFNP
QGELTGFYHKLHLFDVDVDDARGRYRESDSFVAGHDSCVVASPFGGLGLSICYDVRFP
ELYRLLRQRGADVLLVPAAFTKVTGQAHWLPLLQARAIENQCYVVAANQCGSHGGNRE
TRGHSVIIDPWGEVLAQQGSQPGLIVATLDPQKTEQIRKSMPVQLHARLTPAWRE"
misc_feature 291518..292330
/locus_tag="Tola_0259"
/note="nitrilase; Region: PLN02798"
/db_xref="CDD:178395"
misc_feature 291524..292315
/locus_tag="Tola_0259"
/note="Nit1, Nit 2, and related proteins, and the
Nit1-like domain of NitFhit (class 10 nitrilases); Region:
nit; cd07572"
/db_xref="CDD:143596"
misc_feature order(291635..291637,291800..291802,291851..291853,
291863..291865,291902..291904,291977..291982,
291986..291991,292052..292054)
/locus_tag="Tola_0259"
/note="putative active site [active]"
/db_xref="CDD:143596"
misc_feature order(291635..291637,291851..291853,291977..291979)
/locus_tag="Tola_0259"
/note="catalytic triad [active]"
/db_xref="CDD:143596"
misc_feature order(291854..291859,291920..291928,291980..291982,
291989..292003,292007..292012,292076..292081,
292088..292093,292097..292105,292109..292114,
292202..292204,292292..292297,292304..292309,
292313..292315)
/locus_tag="Tola_0259"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143596"
gene 292344..293789
/locus_tag="Tola_0260"
/db_xref="GeneID:7884637"
CDS 292344..293789
/locus_tag="Tola_0260"
/inference="protein motif:PFAM:PF01523"
/note="PFAM: peptidase U62 modulator of DNA gyrase;
KEGG: asa:ASA_3929 TldD protein, suppresses the inhibitory
activity of the carbon storage regulator (CsrA)"
/codon_start=1
/transl_table=11
/product="peptidase U62 modulator of DNA gyrase"
/protein_id="YP_002891476.1"
/db_xref="GI:237807036"
/db_xref="InterPro:IPR002510"
/db_xref="GeneID:7884637"
/translation="MLLPQVSERLLAANGLDQDILAQQLRQLMSHQIEFGDFYFQSGV
HESWILEDGIVKDGSYNIEQGVGVRAISGEKTGFAYSDELSLNALQQAVVAARGVAAA
GGEGQVKIWQPTQPAARYLALDPLPGLPQPQKITLLEELDQFARSLDPCVTQVMASLS
GVYEEVLIAATDGTLVADIRPLVRLSVTVLAERKGRRERGSSGGGGRCGYDYFFEVEN
GESRARGYVREAVRQALVNLEAIDAPAGMMPVVLGAGWPGVLLHEAVGHGLEGDFNRK
GSSAFSGKIGQQVASKHCTIVDDGTLAGRRGSLSVDDEGTPTQYNVLIENGILKGYMQ
DKLNARLMGVAPTGNGRRESYAALPMPRMTNTYMLAGEHDPQEIIASVKKGIYAPNFG
GGQVDITSGKFVFSASEAYLIENGKITAPIKGATLIGNGPEAMQQVSMVGNDLALDKG
VGVCGKDGQSVPVGVGQPTLKLDELTVGGTQ"
misc_feature 292344..293783
/locus_tag="Tola_0260"
/note="Predicted Zn-dependent proteases and their
inactivated homologs [General function prediction only];
Region: TldD; cl00398"
/db_xref="CDD:193802"
misc_feature 292443..293339
/locus_tag="Tola_0260"
/note="Putative modulator of DNA gyrase; Region:
PmbA_TldD; pfam01523"
/db_xref="CDD:190021"
gene complement(293843..294367)
/locus_tag="Tola_0261"
/db_xref="GeneID:7884638"
CDS complement(293843..294367)
/locus_tag="Tola_0261"
/inference="protein motif:PFAM:PF04751"
/note="PFAM: protein of unknown function DUF615;
KEGG: aha:AHA_3937 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891477.1"
/db_xref="GI:237807037"
/db_xref="InterPro:IPR006839"
/db_xref="GeneID:7884638"
/translation="MNHQKNTQDDWDDDYVSKSGQKREAAALQKLGEELVNLKPAELE
RVPLDEDLIAAIAMGHKLKGKHEALRRHLQYVGKMMRNRDTTEIKNVLDQIHSRNNST
NARLHKLEQWRDRLLSNGDDAINAVIGECHTLERQKLRQLISRAKKEAAANQPPAAFR
ELFKYLREHMDEQL"
misc_feature complement(293864..294343)
/locus_tag="Tola_0261"
/note="hypothetical protein; Provisional; Region:
PRK05255"
/db_xref="CDD:179977"
gene 294453..295796
/locus_tag="Tola_0262"
/db_xref="GeneID:7884639"
CDS 294453..295796
/locus_tag="Tola_0262"
/inference="protein motif:PFAM:PF01523"
/note="PFAM: peptidase U62 modulator of DNA gyrase;
KEGG: aha:AHA_3936 protein PmbA"
/codon_start=1
/transl_table=11
/product="peptidase U62 modulator of DNA gyrase"
/protein_id="YP_002891478.1"
/db_xref="GI:237807038"
/db_xref="InterPro:IPR001680"
/db_xref="InterPro:IPR002510"
/db_xref="GeneID:7884639"
/translation="MNSQEQILQEQHKLEQVVTDALHIAQELGADTAEISISKQTGIS
VNTRGGEVENIEFNKDGALGIAIYRDGRKGSSSTADLSIGAIRRCIEAALEISRYTAV
DSCAGLADRELMAWDAPELDLLYPVALEPEYGIELARRCELHALSLDKRIKQSDSGSF
SSHHGIKVYGNTHGFVKGYAASRHSLSCVLIGEQDGDMQRDYSYSTARELSDLWTPER
IAEDAVSRTVSHLGGRKIATTEVPVLFLPEAANSLFGHLVSAISGGNLYRKSTFLLDS
LGQQLFPDWLHINEFAHLPKGLASSPFDGEGVRTQDRAIIQSGVLQTYLLTAYSARKL
GMQSTGHAGGIHNWFVEGQGQTLDALLQQMGTGLVVSELMGQGVNIVTGDYSRGATGF
WVENGQIVYPVEEITIAGNLKEMFRQIVAVGNDIDPRCSLQSGSVLLERMKIAGN"
misc_feature 294453..295790
/locus_tag="Tola_0262"
/note="Predicted Zn-dependent proteases and their
inactivated homologs [General function prediction only];
Region: TldD; cl00398"
/db_xref="CDD:193802"
misc_feature 294543..295424
/locus_tag="Tola_0262"
/note="Putative modulator of DNA gyrase; Region:
PmbA_TldD; pfam01523"
/db_xref="CDD:190021"
gene complement(295840..296169)
/locus_tag="Tola_0263"
/db_xref="GeneID:7884640"
CDS complement(295840..296169)
/locus_tag="Tola_0263"
/inference="protein motif:PFAM:PF04363"
/note="PFAM: protein of unknown function DUF496;
KEGG: ppr:PBPRA1961 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891479.1"
/db_xref="GI:237807039"
/db_xref="InterPro:IPR007458"
/db_xref="GeneID:7884640"
/translation="MQSNEMNNILEFVRVARLKNKLTREIEDNARKIRDNQKRVALLA
NLTEYLKPGMSYEDILEIIHNMKGDYEDRVDDLTIVGAELSKQRREASKQLRNFPRTF
RKEGSAE"
misc_feature complement(295867..296169)
/locus_tag="Tola_0263"
/note="hypothetical protein; Provisional; Region:
PRK05423"
/db_xref="CDD:180070"
gene complement(296278..296580)
/locus_tag="Tola_0264"
/db_xref="GeneID:7884641"
CDS complement(296278..296580)
/locus_tag="Tola_0264"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891480.1"
/db_xref="GI:237807040"
/db_xref="GeneID:7884641"
/translation="MSSARWKIQLSPKIRLSSLVLGIVPVIIVLGWLGIWMPQSLRLL
MLSLFDQLGTLIYYPLAALALAAGFFLAALWRREFNWQYLLEGTLSVWMLLNWPIY"
gene complement(296585..298615)
/locus_tag="Tola_0265"
/db_xref="GeneID:7884642"
CDS complement(296585..298615)
/locus_tag="Tola_0265"
/inference="protein motif:TFAM:TIGR01074"
/note="TIGRFAM: ATP-dependent DNA helicase Rep;
PFAM: UvrD/REP helicase;
KEGG: asa:ASA_0087 ATP-dependent DNA helicase Rep"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase Rep"
/protein_id="YP_002891481.1"
/db_xref="GI:237807041"
/db_xref="InterPro:IPR000212"
/db_xref="InterPro:IPR005752"
/db_xref="InterPro:IPR014016"
/db_xref="InterPro:IPR014017"
/db_xref="GeneID:7884642"
/translation="MKLNPRQLDAMHYVSGPCLVLAGAGSGKTRVITAKIAYLIRECS
YQARHIFAVTFTNKAAREMKERVAQTLGRREARGLTVSTFHSLGLDLIRREHQHLQLK
ANFSLFDDTDQMSLIKELTEADPELQGNKELLQQLVQTISRYKNDLILPAQALKRAHT
PEEQRFAIWYERYQKQMSAYNALDFDDLILLPTLLLKTNAEVREQWQNRIRYLLVDEY
QDTNTSQYELVKLLVGERARFTVVGDDDQSIYSWRGAQPQNLVRLQQDFPRLNVIKLE
QNYRSKGRILKCANILIANNPHVFDKQLFSELDYGMPVRVLMAKNEEHEAEKVAAEIM
GHRFMNRTSWKDYAILYRGNHQSRLLEKVLMQNRIPYKISGGTSFFSRTEIKDIMAYL
RLLVNPDDDNAFLRVVNLPRREIGPTTLEKLGHYANQRGKSLYAASFEIGLEQHLHGR
GLQALRHFCDWLCRMSDNAARGNSEEVVRDLIKDIHYDEWLYETSPSPKAAEMRMQNV
STLYRWLTDMLAGDVQQDAAPLNLSEAVARFTLRDMLERNEGDEALDQVQLMTLHASK
GLEFPYVFMIGMEEGLLPHQASIDEDNIDEERRLAYVGITRAQTELCFVLCKERRQFG
DTVNPEPSRFLLELPQDDLQWEARKEPASAEQRQQKAKTGIANLRAMLKEKG"
misc_feature complement(296609..298612)
/locus_tag="Tola_0265"
/note="ATP-dependent DNA helicase Rep; Region: rep;
TIGR01074"
/db_xref="CDD:130146"
misc_feature complement(298352..298600)
/locus_tag="Tola_0265"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:205425"
misc_feature complement(296771..>296938)
/locus_tag="Tola_0265"
/note="Family description; Region: UvrD_C_2; pfam13538"
/db_xref="CDD:205716"
gene 298691..299158
/locus_tag="Tola_0266"
/db_xref="GeneID:7884643"
CDS 298691..299158
/locus_tag="Tola_0266"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891482.1"
/db_xref="GI:237807042"
/db_xref="GeneID:7884643"
/translation="MAYVNSGIEMKTSQYDWRIIGFIILLLVAVCALVTIKLLFPDMT
QEKLFSVLSSSSPAVNTASPQNVPSEKSAATASHPVIAVAEVPAKASPPAVEQVVKTE
TKVVNSVPAATDTHVTVETTETATTQHIAEEPRSASKAQIVCSAEDREAELCQ"
gene 299201..300319
/locus_tag="Tola_0267"
/db_xref="GeneID:7884644"
CDS 299201..300319
/locus_tag="Tola_0267"
/inference="similar to AA sequence:KEGG:Pnap_3259"
/note="KEGG: pna:Pnap_3259 TRAP-type uncharacterized
transport system protein, periplasmic component"
/codon_start=1
/transl_table=11
/product="TRAP-type transport system periplasmic
component"
/protein_id="YP_002891483.1"
/db_xref="GI:237807043"
/db_xref="GeneID:7884644"
/translation="MKVNSYIVKGACLLMTLHITGASAQLSNAITTGNQSDTYYRIGE
DLRQYAMPELRNLQSKGAVDNIKALSKTTGVSFAIVQSDVYQTYVNLEKNDPDPAVRQ
WAADLLNSLRVVAPLYNEEIYFVVHKDSPMQELQDIEGKRLAIGLNGSGANLTAKNIY
YKLFGKAPVVVEPFIEEGVVGSDEGTKYVRSALWHLAHPEAGPEERKADVVVIIGGQP
LPLLQRLGKDYKLLASNIKNDATEALLKDYSIGFADQKNYPFLPKHMPVMMVQSYLVT
AQFRDKQRNDFVKKFAGSLCKNYDKLYEHGHEKWKALAWSPQRPRLPSLLSGWRYSDV
TKPILEACLPQGVTQPVASSNAPAFPCSMEDRAIGLCM"
misc_feature 299237..300106
/locus_tag="Tola_0267"
/note="NMT1-like family; Region: NMT1_2; cl15260"
/db_xref="CDD:212369"
gene 300429..301655
/locus_tag="Tola_0268"
/db_xref="GeneID:7884645"
CDS 300429..301655
/locus_tag="Tola_0268"
/inference="protein motif:TFAM:TIGR01979"
/note="TIGRFAM: cysteine desulfurase, SufS subfamily;
PFAM: aminotransferase class V; aminotransferase class I
and II;
KEGG: asa:ASA_0086 cysteine desulphurase"
/codon_start=1
/transl_table=11
/product="SufS subfamily cysteine desulfurase"
/protein_id="YP_002891484.1"
/db_xref="GI:237807044"
/db_xref="InterPro:IPR000192"
/db_xref="InterPro:IPR004839"
/db_xref="InterPro:IPR010970"
/db_xref="GeneID:7884645"
/translation="MTSFDVQRVRGQFLILQQQINGYPLVYLDSAATAHKPECVLQAM
LDFYRTDNANVHRSAHTLASRATQKFEQARQRVADFLHARRREEIIWTRGTTESINLV
AQTWGLQSLQAGDEILLSAMEHHANLVTWQQVARQTGARLRIIPLLESGELDMQAYQA
MLSTHTRMVAIVHVSNVLGTVNPVADVVRLAKQAGALTLIDGAQAVAHAPVDVQALGC
DFYAFSGHKVYGPTGIGVLYGRKEILAQLPPWQFGGEMIRKVTFTESEFSLPPLRFEA
GTPAIAEAVGLSAALDFLCEQLAAGAEVYQQQLLQRLLQGLQQIDGVSLVGQPAARQG
VVSVVLAHAHHHDVCQLLDAQGIAVRSGHHCAMPLLHSLGLAGTLRISLGVYNNETEI
DAFLQALRQALELLHD"
misc_feature 300432..301643
/locus_tag="Tola_0268"
/note="Selenocysteine lyase/Cysteine desulfurase
[Posttranslational modification, protein turnover,
chaperones]; Region: csdA; COG0520"
/db_xref="CDD:30866"
misc_feature 300504..301625
/locus_tag="Tola_0268"
/note="Cysteine desulfurase (SufS)-like. This family
belongs to the pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The major
groups in this CD correspond to cysteine desulfurase
(SufS) and selenocysteine lyase. SufS...; Region:
SufS_like; cd06453"
/db_xref="CDD:99746"
misc_feature order(300711..300716,300723..300725,300798..300800,
301029..301031,301035..301040,301098..301100,
301104..301109)
/locus_tag="Tola_0268"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99746"
misc_feature 301107..301109
/locus_tag="Tola_0268"
/note="catalytic residue [active]"
/db_xref="CDD:99746"
gene 301648..302106
/locus_tag="Tola_0269"
/db_xref="GeneID:7884646"
CDS 301648..302106
/locus_tag="Tola_0269"
/inference="protein motif:PFAM:PF02657"
/note="PFAM: Fe-S metabolism associated SufE;
KEGG: aha:AHA_4240 SufE protein"
/codon_start=1
/transl_table=11
/product="Fe-S metabolism associated SufE"
/protein_id="YP_002891485.1"
/db_xref="GI:237807045"
/db_xref="InterPro:IPR003808"
/db_xref="GeneID:7884646"
/translation="MTELFDFTVHFPVGAGTALDENHVRQLLADANSWEERYRQLLLL
AKQVPSVPQLWRHPDHEVGGCESRVWLLLCRDDAGKYHFAVDSESRIVKALLITILAA
ANHQTADKIHRIQVASYLAELGFAQHITLSRTNGLQAVWKKMSDFCASFA"
misc_feature 301690..302079
/locus_tag="Tola_0269"
/note="Fe-S metabolism associated domain; Region: SufE;
cl00951"
/db_xref="CDD:207258"
gene 302184..302861
/locus_tag="Tola_0270"
/db_xref="GeneID:7884647"
CDS 302184..302861
/locus_tag="Tola_0270"
/inference="protein motif:PFAM:PF00563"
/note="PFAM: EAL domain protein;
SMART: EAL domain protein;
KEGG: vha:VIBHAR_04978 diguanylate
cyclase/phosphodiesterase"
/codon_start=1
/transl_table=11
/product="diguanylate phosphodiesterase"
/protein_id="YP_002891486.1"
/db_xref="GI:237807046"
/db_xref="InterPro:IPR001633"
/db_xref="GeneID:7884647"
/translation="MLDGLPAVLNKASLRFVAQPIFRQKGELYGHEMMLLHKQHKDPA
MFMKIVNHMGLRQNLDLEVCRMAEPVLRTHNLTGCCCINLFADSLQEENVIEALLMLA
DPSASRWVMVNVMQLDTSNKQFNLSEIIADLRQCGVRFCFDVKLLMQITAMSLPVDML
RMDIRQVPEDQWARWISFAESNCVPMLAAGVDDDTHREALRELGIDFLQGKIFADMVL
LNQNQTA"
misc_feature 302196..302825
/locus_tag="Tola_0270"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene complement(302926..303705)
/locus_tag="Tola_0271"
/db_xref="GeneID:7884648"
CDS complement(302926..303705)
/locus_tag="Tola_0271"
/inference="protein motif:PFAM:PF00899"
/note="PFAM: UBA/THIF-type NAD/FAD binding protein;
KEGG: aha:AHA_4241 ThiF domain-containing protein"
/codon_start=1
/transl_table=11
/product="UBA/THIF-type NAD/FAD binding protein"
/protein_id="YP_002891487.1"
/db_xref="GI:237807047"
/db_xref="InterPro:IPR000594"
/db_xref="GeneID:7884648"
/translation="MQSDYSQRFGGIARLYGEKALQCFQQSHVCVIGIGGVGSWAAEA
LARSGIGQLTLIDMDDICVTNTNRQIHALQGNVGKLKTEVMAERIRLINPDCQIHIVD
DFITEDNLAGFVDARFDFVVDAIDSIRAKVALLAHCKRQKISLITTGGAGGQKDPTQI
AITDLSRTTQDPLAAKVRADLRRKFGFPRDPKKKFGIPCVYSTEQLTYPDGAGGTCSA
KASSDGNMKMDCASGFGATTVVTATFGLTAVSYVLQKLADK"
misc_feature complement(302929..303693)
/locus_tag="Tola_0271"
/note="sulfur acceptor protein CsdL; Provisional; Region:
PRK15116"
/db_xref="CDD:185071"
misc_feature complement(302947..303660)
/locus_tag="Tola_0271"
/note="Family of activating enzymes (E1) of ubiquitin-like
proteins related to the E.coli hypothetical protein ygdL.
The common reaction mechanism catalyzed by E1-like enzymes
begins with a nucleophilic attack of the C-terminal
carboxylate of the ubiquitin-like...; Region: YgdL_like;
cd00755"
/db_xref="CDD:30110"
misc_feature complement(order(303316..303318,303334..303336,
303463..303465,303502..303504,303529..303531,
303535..303537,303595..303597,303601..303603,
303607..303609))
/locus_tag="Tola_0271"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:30110"
misc_feature complement(order(303238..303240,303256..303261,
303313..303315,303595..303597))
/locus_tag="Tola_0271"
/note="putative substrate interface [chemical binding];
other site"
/db_xref="CDD:30110"
gene 303910..304686
/locus_tag="Tola_0272"
/db_xref="GeneID:7884649"
CDS 303910..304686
/locus_tag="Tola_0272"
/inference="protein motif:PFAM:PF00535"
/note="PFAM: glycosyl transferase family 2;
KEGG: pst:PSPTO_5587 glycosyl transferase, group 2 family
protein"
/codon_start=1
/transl_table=11
/product="family 2 glycosyl transferase"
/protein_id="YP_002891488.1"
/db_xref="GI:237807048"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:7884649"
/translation="MICDEQVEMVIHQPAVTVVIPAKNEAENIRPLINEIRTAMDDEF
DYELIYVDDGSTDDTFNILKSIRDEGFSKLKVIRHQQSVGQSFSVLNGARHGAGEWLV
VLDADGQNVPADIPGMLKTLQAAYASDPKKVGIIGHRVTRRDDWIKRLSSKLANGFRD
WMLKDGIPDTGCGLKATRREWYVQLPAFNHMHRYVPALIQSMGGEMLVHPVNHRPRMA
GVSNYGVWNRLWVGLVDVFGVRWLQHRAKRIVIQEILNGR"
misc_feature 303961..304518
/locus_tag="Tola_0272"
/note="Bacterial DPM1_like enzymes are related to
eukaryotic DPM1; Region: DPM1_like_bac; cd04187"
/db_xref="CDD:133030"
misc_feature order(303970..303972,303976..303978,304228..304230)
/locus_tag="Tola_0272"
/note="Ligand binding site; other site"
/db_xref="CDD:133030"
misc_feature order(304066..304068,304225..304230)
/locus_tag="Tola_0272"
/note="Putative Catalytic site; other site"
/db_xref="CDD:133030"
misc_feature 304222..304230
/locus_tag="Tola_0272"
/note="DXD motif; other site"
/db_xref="CDD:133030"
gene 304676..305017
/locus_tag="Tola_0273"
/db_xref="GeneID:7884650"
CDS 304676..305017
/locus_tag="Tola_0273"
/inference="protein motif:PFAM:PF07578"
/note="PFAM: lipid A biosynthesis domain protein;
KEGG: smt:Smal_3961 lipid A biosynthesis domain protein"
/codon_start=1
/transl_table=11
/product="lipid A biosynthesis domain-containing protein"
/protein_id="YP_002891489.1"
/db_xref="GI:237807049"
/db_xref="InterPro:IPR011499"
/db_xref="GeneID:7884650"
/translation="MGADWLDLPISWLEWTGVHITGWKIIGYTGALMFGGRWLVQFVA
SKRAGKPVIPRLFWYMSVGGSLMTLSYFLFSAKQDSVGVLQNLFPAFTALYSLWLDIK
HRGWHRDRASH"
misc_feature 304676..304996
/locus_tag="Tola_0273"
/note="Lipid A Biosynthesis N-terminal domain; Region:
LAB_N; cl01627"
/db_xref="CDD:154504"
gene 305045..306760
/locus_tag="Tola_0274"
/db_xref="GeneID:7884651"
CDS 305045..306760
/locus_tag="Tola_0274"
/inference="protein motif:PFAM:PF02366"
/note="PFAM: glycosyl transferase family 39;
KEGG: pat:Patl_3674 glycosyl transferase family protein"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_002891490.1"
/db_xref="GI:237807050"
/db_xref="InterPro:IPR003342"
/db_xref="GeneID:7884651"
/translation="MITDRFALQGWQSDRLNLLFLLGLGLLILGAGLGLRDPWPADEP
RFALVAKQMVESGQWLFPFRGGEIYPDKPPMFMWGIALGYFITGSLRVAFLLPSLLAG
LGCIALVYDIARRIWDRATAFRAGLFLLFAVQFTVQAKQAQIDALVTFFITLGGYGFL
RFLLCGGGWRWYYLGWFAAGLGIITKGVGIIAALVLIPALWTHREQIKQASKAQWLKG
LAGPLFMLLACALWVIPMVLVVQQHPLPEFLAYRDNILFRQTVTRYANAWHHIKPFWF
YLVNVIPSFWLPWSLLLPWMVWQTKRDVKLGQRPVILLVGYLLLILLFFSASAGKRGV
YITPATPVLALLVAYWLPELLTRRWPARLLAGLGWLLSGLFLCAGLVLLLKPALIAKL
GEMDSPVLLALSLGATGLVANWLLRRQPLSAILATLTILWLHYGFWAYPLMNHLRTPQ
QIMQQAGQRLAPQDELLLTNFREQFLLFADRPVYHFAYLQDDEPQPTDAAAWVQAASH
RWVLGPGDKLSPCFAADKGIALGQRHGDDWFLFRADAVLPACQSAQSSGAGIFYYAPK
LLVGE"
misc_feature 305150..>305884
/locus_tag="Tola_0274"
/note="4-amino-4-deoxy-L-arabinose transferase and related
glycosyltransferases of PMT family [Cell envelope
biogenesis, outer membrane]; Region: ArnT; COG1807"
/db_xref="CDD:31992"
misc_feature 305255..305746
/locus_tag="Tola_0274"
/note="Dolichyl-phosphate-mannose-protein
mannosyltransferase; Region: PMT_2; pfam13231"
/db_xref="CDD:205412"
gene 306763..307770
/locus_tag="Tola_0275"
/db_xref="GeneID:7884652"
CDS 306763..307770
/locus_tag="Tola_0275"
/inference="protein motif:PFAM:PF01370"
/note="PFAM: NAD-dependent epimerase/dehydratase; 3-beta
hydroxysteroid dehydrogenase/isomerase; Male sterility
domain; polysaccharide biosynthesis protein CapD;
short-chain dehydrogenase/reductase SDR;
dTDP-4-dehydrorhamnose reductase;
KEGG: esa:ESA_01535 hypothetical protein"
/codon_start=1
/transl_table=11
/product="NAD-dependent epimerase/dehydratase"
/protein_id="YP_002891491.1"
/db_xref="GI:237807051"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002225"
/db_xref="InterPro:IPR003869"
/db_xref="InterPro:IPR005913"
/db_xref="InterPro:IPR008089"
/db_xref="InterPro:IPR013120"
/db_xref="GeneID:7884652"
/translation="MHYLVTGAAGFIGFHVAERLLAAGHQVTGLDNLNDYYDVNLKLS
RLALLQAHPAFHFVKGDLADRTLMADLFTNGQFRRVIHLGAQAGVRYSLDNPHAYADA
NLVGHLNILEGCRQHKIEHLLYASSSSVYGLNRKTPFSVNDSVDHPVSLYAATKKANE
LMSHSYAHLYGLPCTGLRFFTVYGPWGRPDMALFKFTKAILAGQPIDVYNFGEMKRDF
TFIDDIAEAIIRLAEVIPQPNAEWTVETGSPAESSAPYRVYNIGNSQPVELKTFIHEL
EQALGIPAQMNLLPLQPGDVLETSADTSALETVIGFKPQTPLASGLARFVSWYKSFYS
L"
misc_feature 306763..307761
/locus_tag="Tola_0275"
/note="Nucleoside-diphosphate-sugar epimerases [Cell
envelope biogenesis, outer membrane / Carbohydrate
transport and metabolism]; Region: WcaG; COG0451"
/db_xref="CDD:30800"
misc_feature 306763..307758
/locus_tag="Tola_0275"
/note="UDP glucuronic acid epimerase, extended (e) SDRs;
Region: UDP_GE_SDE_e; cd05253"
/db_xref="CDD:187563"
misc_feature order(306781..306783,306787..306798,306853..306861,
307009..307017,307066..307068,307135..307143,
307216..307218,307228..307230,307297..307308)
/locus_tag="Tola_0275"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187563"
misc_feature order(307069..307071,307141..307143,307216..307218,
307228..307230)
/locus_tag="Tola_0275"
/note="active site"
/db_xref="CDD:187563"
misc_feature order(307141..307143,307216..307218,307303..307305,
307348..307350,307384..307386,307408..307410)
/locus_tag="Tola_0275"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:187563"
gene complement(307758..308351)
/locus_tag="Tola_0276"
/db_xref="GeneID:7884653"
CDS complement(307758..308351)
/locus_tag="Tola_0276"
/inference="protein motif:PFAM:PF03886"
/note="PFAM: protein of unknown function DUF330;
KEGG: eca:ECA2531 putative lipoprotein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891492.1"
/db_xref="GI:237807052"
/db_xref="InterPro:IPR005586"
/db_xref="GeneID:7884653"
/translation="MMMPRYVLVVLLLCGLSACSTATAPQYYAIALPDEQSGTLSASQ
QPVVAVSDVELADYLSSIGIVYQQDDVQLTTANQHRWAEALDKQLTRALLQNLRQQLP
DWQWQNGQMAGQNIAQLQVKIRGFHGKADGHAVISGEWVLNTGKQQYSGQFQQLYPLT
ADGYPALVRELRTGWQQTTSQLAMQLKPLLQNAAHSE"
misc_feature complement(307785..308348)
/locus_tag="Tola_0276"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3009"
/db_xref="CDD:32826"
misc_feature complement(307803..308255)
/locus_tag="Tola_0276"
/note="Protein of unknown function (DUF330); Region:
DUF330; pfam03886"
/db_xref="CDD:190782"
gene complement(308348..309985)
/locus_tag="Tola_0277"
/db_xref="GeneID:7884654"
CDS complement(308348..309985)
/locus_tag="Tola_0277"
/inference="protein motif:PFAM:PF02470"
/note="PFAM: Mammalian cell entry related domain protein;
KEGG: ypb:YPTS_1549 hypothetical protein"
/codon_start=1
/transl_table=11
/product="mammalian cell entry domain-containing protein"
/protein_id="YP_002891493.1"
/db_xref="GI:237807053"
/db_xref="InterPro:IPR003399"
/db_xref="GeneID:7884654"
/translation="MPNNYARIKKLQRLSPIWLIPIVAACIGLWMVVTTINSQGPLIT
LEMDNAEGLEPGKTPIKARSVEIGKVQTVRLGNDLKHVIVTAQMNVEAEPLLREDTRF
WVVKPRVGKSGISGLNTLLSGSYLELQPGKSKEHKLEFTVLDTPPVTPTNAPGLRIEL
SSEQDSALSIGDPVLYRGFTVGRVEQAEFKSDSRQMSYQLFIQAPYDALVTSNTRFWL
NRGIQLQAATDGIKIKTGTLETILSGGVSFSVPPGWELGQPVKGYRSFNLYADEDSST
IRRYQDKVDYILLFDESVRGLNPGAPVEYRGIQVGSVLAVPFSVPGNDLLTARSRQIP
VLIRIEPGRIRGDMDKDQLPNWEKEFTTAVRQGLRASLRSGNLLTGALYVDLNFYPDL
PKTTGLGELANYRTLPTASGGLARIEQQVVQLLNKLNQLDIEQVLTNAQTMLTETEAA
MANVRQVSASMDKIANQQSSQELPAELKRTLAEMQQTLKGLSASSPAYGELNRSIQSL
NRVLREVQPMARTLNEKPNALLFQPDTATDPEPRKAK"
misc_feature complement(308351..309985)
/locus_tag="Tola_0277"
/note="paraquat-inducible protein B; Provisional; Region:
PRK10807"
/db_xref="CDD:182747"
misc_feature complement(309593..309871)
/locus_tag="Tola_0277"
/note="mce related protein; Region: MCE; pfam02470"
/db_xref="CDD:111376"
misc_feature complement(<309359..309526)
/locus_tag="Tola_0277"
/note="mce related protein; Region: MCE; pfam02470"
/db_xref="CDD:111376"
misc_feature complement(308822..309142)
/locus_tag="Tola_0277"
/note="mce related protein; Region: MCE; pfam02470"
/db_xref="CDD:111376"
gene complement(309975..311276)
/locus_tag="Tola_0278"
/db_xref="GeneID:7884655"
CDS complement(309975..311276)
/locus_tag="Tola_0278"
/inference="protein motif:TFAM:TIGR00155"
/note="TIGRFAM: integral membrane protein, PqiA family;
PFAM: Paraquat-inducible protein A;
KEGG: eca:ECA2533 paraquat-inducible protein A"
/codon_start=1
/transl_table=11
/product="PqiA family integral membrane protein"
/protein_id="YP_002891494.1"
/db_xref="GI:237807054"
/db_xref="InterPro:IPR002129"
/db_xref="InterPro:IPR005219"
/db_xref="InterPro:IPR007498"
/db_xref="GeneID:7884655"
/translation="MKRHRRSTYVRSAVQYTACHECDWLMVVPPLQPGEQAVCPRCEH
KLRSLPAEARLQPMVYSIAALIMLLCSNLFPFLGMMVKGMHQDMTLYQTATTLLEEQH
PALALTVYLFMQILPAICLLLICLIYSRLGQWRGKRLRKRYTLWLFRLIPWCMVEVFL
IGVLVSLIKIASLADIELGYSFWAYVLFSLTMLKAFSAIDRDWLWWQQSGPVHLRTPP
APRGRAIDQNLTLCHACHGLVSLKTHRCPRCQSVLHARKPHSLQWTLALLFTAAILYI
PANILPIMVTESFGQQTYSTILGGVVLLWDMGSYPVALIIFIASVLVPMVKMLAISWL
CWSVYVKRLHHRRGRTRLYRLTEFIGRWSMVDVFVVAILVALIRMGKLMSVYPGSAAL
AFAGVVVLTMLSAMSFDPRLLWDTEPDTVQPVTEGKSDRAE"
misc_feature complement(310017..311222)
/locus_tag="Tola_0278"
/note="paraquat-inducible membrane protein A; Provisional;
Region: PRK15103"
/db_xref="CDD:185058"
misc_feature complement(310662..311099)
/locus_tag="Tola_0278"
/note="Paraquat-inducible protein A; Region: PqiA;
pfam04403"
/db_xref="CDD:203002"
misc_feature complement(310032..310499)
/locus_tag="Tola_0278"
/note="Paraquat-inducible protein A; Region: PqiA;
pfam04403"
/db_xref="CDD:203002"
gene complement(311434..312918)
/locus_tag="Tola_0279"
/db_xref="GeneID:7884656"
CDS complement(311434..312918)
/locus_tag="Tola_0279"
/EC_number="1.1.1.86"
/inference="protein motif:TFAM:TIGR00465"
/note="catalyzes the formation of
(R)-2,3-dihydroxy-3-methylbutanoate from
(S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and
isoleucine biosynthesis"
/codon_start=1
/transl_table=11
/product="ketol-acid reductoisomerase"
/protein_id="YP_002891495.1"
/db_xref="GI:237807055"
/db_xref="InterPro:IPR000506"
/db_xref="InterPro:IPR013023"
/db_xref="InterPro:IPR013116"
/db_xref="GeneID:7884656"
/translation="MANYFNTLNLRQQLEQLGKCRFMNRDEFASECDFLKGKKVVIVG
CGAQGLNQGLNMRDSGLDVSYALRAEAIAEKRKSFKQASENGFTVGTYEDLIPTADLV
VNLTPDKQHTSVVKAVMPLMKDGAALGYSHGFNIVEEGTQIRKDITVVMVAPKCPGTE
VREEYKRGFGVPTLIAVHPENDPKGDGLAIAKAWAAATGGHRAGVLQSSFVAEVKSDL
MGEQTILCGMLQAGSILCYEKMIADGIDAGYAGKLIQFGWETITEALKQGGITAMMDR
LSNPAKLRAFELAEEMRVLMRPLFRKHQDDIISGAFSSGMMADWANNDADLFRWREET
GASAFENAPAFDGAIAEQEYFDNGILMVAMVKAGVELAFETMTESGIIAESAYYESLH
ELPLIANTIARKRLYEMNVVISDTAEYGNYLFANAAVPLLKAHIMPKVGTDVIGKTLS
VKDNGVDNVTLVQVNEIIRNHPIEQVGKVLRGYMKDMKRIAVGG"
misc_feature complement(311446..312915)
/locus_tag="Tola_0279"
/note="ketol-acid reductoisomerase; Validated; Region:
PRK05225"
/db_xref="CDD:179967"
misc_feature complement(312379..312816)
/locus_tag="Tola_0279"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(311920..312291)
/locus_tag="Tola_0279"
/note="Acetohydroxy acid isomeroreductase, catalytic
domain; Region: IlvC; pfam01450"
/db_xref="CDD:110451"
misc_feature complement(311455..311847)
/locus_tag="Tola_0279"
/note="Acetohydroxy acid isomeroreductase, catalytic
domain; Region: IlvC; pfam01450"
/db_xref="CDD:110451"
gene 313071..313949
/locus_tag="Tola_0280"
/db_xref="GeneID:7884657"
CDS 313071..313949
/locus_tag="Tola_0280"
/inference="protein motif:PFAM:PF03466"
/note="participates in controlling several genes involved
in isoleucine and valine biosynthesis; activates the
transcription of the ilvC gene in the presence of
acetolactate or acetohydroxybutyrate"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator IlvY"
/protein_id="YP_002891496.1"
/db_xref="GI:237807056"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:7884657"
/translation="MDFRTLSLFAHLAHTLHFANTANQMAVSPSTLSRTMQRLEQETG
CALFERDNRSVVLTAEGRRLLTFAERWLQEWQDLRDDLRHPREALQGRIRVFCSVTAS
YFLLPEVLGRFRHRYPQLELKLETGDAALAVDKVLQEETDIAIAARPDALPARLQYCL
LQQVPLVFIAPRNSTNVSQWLKDGEPDWSQVPLIVSQQGLARKRCDQWFRNKGISPNI
YAEVAGNEAIVSMVTLDCGIGLVPEAVIEHSTFGSQVRVIQPVPALKPFEVGFCVLKR
RLEEPLLQAFWQMVQQ"
misc_feature 313077..313256
/locus_tag="Tola_0280"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 313143..313946
/locus_tag="Tola_0280"
/note="DNA-binding transcriptional regulator IlvY;
Provisional; Region: PRK11716"
/db_xref="CDD:183288"
misc_feature 313347..313937
/locus_tag="Tola_0280"
/note="The C-terminal substrate binding of LysR-type
transcriptional regulator IlvY, which activates the
expression of ilvC gene that encoding acetohydroxy acid
isomeroreductase for the biosynthesis of branched amino
acids; contains the type 2 periplasmic bindin; Region:
PBP2_IlvY; cd08430"
/db_xref="CDD:176121"
misc_feature order(313389..313394,313398..313403,313410..313412,
313422..313424,313428..313448,313725..313742,
313758..313763,313767..313772)
/locus_tag="Tola_0280"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176121"
gene 314089..315738
/gene="pgi"
/locus_tag="Tola_0281"
/db_xref="GeneID:7884658"
CDS 314089..315738
/gene="pgi"
/locus_tag="Tola_0281"
/EC_number="5.3.1.9"
/inference="protein motif:PRIAM:5.3.1.9"
/note="functions in sugar metabolism in glycolysis and the
Embden-Meyerhof pathways (EMP) and in gluconeogenesis;
catalyzes reversible isomerization of glucose-6-phosphate
to fructose-6-phosphate; member of PGI family"
/codon_start=1
/transl_table=11
/product="glucose-6-phosphate isomerase"
/protein_id="YP_002891497.1"
/db_xref="GI:237807057"
/db_xref="InterPro:IPR001672"
/db_xref="GeneID:7884658"
/translation="MKNINPTQTKAWKALETHFAANKDRQLSELFAADPARFDKFSTT
YKDNILVDYSKNLITDETLDLLIDLAHEVDLRSAIDAMFNGEKINHTEGRAVLHTALR
NRSNRPVMVDGKDVMPEVNAVLAKIKAFCDSVISGEWKGYTGKAIQHVVNIGIGGSDL
GPVMITEALRPFKNHLQMHFVSNVDGTHIAETLKNVDPETTLFLVASKTFTTQETMTN
ALSARDWFVNIAGDQAHVAKHFAALSTNTKAVAEFGIDTANMFEFWDWVGGRYSSWSA
IGMPIALSLGFENFEALLEGAFEMDTHFATTSYEQNIPVLLALIGLWYNNFYEAESEA
ILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNKVDYQTGPIIWGEPGTNGQHAFYQLM
HQGTKLIPCDFLAPAITHNPIGDHHPKLLANFFAQTEALAFGKSKEAVEAEFLAAGKT
LEQVKDLVPFKVFEGNRPTNSILFKQMTPQTLGALIAMYEHKIFVQGIIWNIFSFDQW
GVELGKQLANKILPELNSDAAVTSHDSSTNGLINTWKAWKA"
misc_feature 314092..315735
/gene="pgi"
/locus_tag="Tola_0281"
/note="glucose-6-phosphate isomerase; Reviewed; Region:
pgi; PRK00179"
/db_xref="CDD:178917"
misc_feature 314449..314937
/gene="pgi"
/locus_tag="Tola_0281"
/note="Phosphoglucose isomerase (PGI) contains two SIS
(Sugar ISomerase) domains. This classification is based on
the alignment of the first SIS domain. PGI is a
multifunctional enzyme which as an intracellular dimer
catalyzes the reversible isomerization of...; Region:
SIS_PGI_1; cd05015"
/db_xref="CDD:88410"
misc_feature order(314551..314553,314557..314562,314707..314715,
314722..314724,314893..314895)
/gene="pgi"
/locus_tag="Tola_0281"
/note="active site"
/db_xref="CDD:88410"
misc_feature order(314632..314643,314728..314730,314740..314742,
314749..314751)
/gene="pgi"
/locus_tag="Tola_0281"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88410"
misc_feature 315079..315648
/gene="pgi"
/locus_tag="Tola_0281"
/note="Phosphoglucose isomerase (PGI) contains two SIS
(Sugar ISomerase) domains. This classification is based on
the alignment of the second SIS domain. PGI is a
multifunctional enzyme which as an intracellular dimer
catalyzes the reversible isomerization of...; Region:
SIS_PGI_2; cd05016"
/db_xref="CDD:88411"
misc_feature order(315079..315081,315103..315105,315139..315141,
315151..315153,315160..315165,315223..315225,
315229..315237,315244..315249,315256..315261,
315268..315270,315334..315336,315340..315342,
315364..315366,315373..315375)
/gene="pgi"
/locus_tag="Tola_0281"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88411"
misc_feature order(315139..315141,315151..315153)
/gene="pgi"
/locus_tag="Tola_0281"
/note="active site"
/db_xref="CDD:88411"
gene complement(315807..317480)
/locus_tag="Tola_0282"
/db_xref="GeneID:7884659"
CDS complement(315807..317480)
/locus_tag="Tola_0282"
/inference="protein motif:TFAM:TIGR00254"
/note="KEGG: aha:AHA_2666 GGDEF domain-containing protein;
TIGRFAM: diguanylate cyclase;
PFAM: GGDEF domain containing protein; NMT1/THI5 like
domain protein;
SMART: GGDEF domain containing protein"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase"
/protein_id="YP_002891498.1"
/db_xref="GI:237807058"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR015168"
/db_xref="GeneID:7884659"
/translation="MEKDIQIAGFRWIVFLFIFCFINPLAAAEHVVVQLKWVNQFQFA
GYYAALEKGFYKAAGFDVELRPNGYDGAFVSPVDAVVSGKAQYGISNSGLVLDYLNGK
PVVALAATLQHSAVSWIVLEKSGIRNIHDMANKRLMTVFPLSESLELLEPFRAEGIAP
EKLNLIQTVFDLQPLIDGKVDAYDGYVTNEPFLLEQKGIAYRLIDPRTYGIDFYGDVL
FTSQNELRDHPERVAAFRKASMDGWRYAMAHPEEITDLILNKYAPQKTREHLRYEAKA
MWDLMQPEIIEIGHMNPGRWLHIAEVMVEHKRLIDDKALNSFIYNEEDYQPDLLRYLR
IATIASIIALLLAGIATWIYRINRRLTREIAAREAAEQQLRRLSETDALTGLANRRAF
DQQLHKEFQRFLRYRHTFSIVMIDIDLFKRINDTYGHPAGDHVLTEFAWRLRDHIRKT
DILARIGGEEFAIMLPETYPWEAKKRTLLLQQIISKTPFKLSDTTDTPVMITASFGIS
SVAENDLIADAALIRADTALYEAKNNGRNQVILFNADRKPVLVADKTTA"
misc_feature complement(316710..317402)
/locus_tag="Tola_0282"
/note="NMT1-like family; Region: NMT1_2; cl15260"
/db_xref="CDD:212369"
misc_feature complement(316725..317363)
/locus_tag="Tola_0282"
/note="NMT1/THI5 like; Region: NMT1; pfam09084"
/db_xref="CDD:192206"
misc_feature complement(315861..316343)
/locus_tag="Tola_0282"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(316104..316106,316233..316235))
/locus_tag="Tola_0282"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(316101..316112,316116..316118,
316182..316184,316194..316196,316206..316211,
316218..316220))
/locus_tag="Tola_0282"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(316044..316046,316128..316130))
/locus_tag="Tola_0282"
/note="I-site; other site"
/db_xref="CDD:143635"
gene 317922..319841
/locus_tag="Tola_0283"
/db_xref="GeneID:7884660"
CDS 317922..319841
/locus_tag="Tola_0283"
/inference="protein motif:TFAM:TIGR00851"
/note="TIGRFAM: PTS system, mannitol-specific IIC subunit;
PFAM: phosphoenolpyruvate-dependent sugar
phosphotransferase system EIIA 2; phosphotransferase
system EIIC; phosphotransferase system
lactose/cellobiose-specific IIB subunit;
KEGG: aha:AHA_0551 PTS system mannitol-specific EIICBA
component (EIICBA-mtl) (EII-mtl)"
/codon_start=1
/transl_table=11
/product="PTS system mannitol-specific transporter subunit
IIC"
/protein_id="YP_002891499.1"
/db_xref="GI:237807059"
/db_xref="InterPro:IPR002178"
/db_xref="InterPro:IPR003352"
/db_xref="InterPro:IPR003501"
/db_xref="InterPro:IPR004718"
/db_xref="InterPro:IPR013011"
/db_xref="InterPro:IPR013014"
/db_xref="GeneID:7884660"
/translation="MLSPDTKVKIQNFGRFLSNMVMPNIGAFIAWGFITALFIPTGWL
PSETLAKLVGPMIMYLLPLLIGYTGGKLVGGERGAVVGAVTTMGVIVGTDIPMFMGAM
MAGPLGGWTIKRFDRMIDGKVKSGFEMLVNNFSAGIIGMLLAIVAFFLIGPFVKGMSA
ALAAGVGFLVENGLLPLTSIFVEPAKILFLNNAINHGIFSPLGIQQATEHGKSIFFLI
EANPGPGFGILLAYMMFGRGNAKQSAAGASIIHFLGGIHEIYFPYVLMNPRLILAVIA
GGMTGVFTLTLFNAGLVSPASPGSIFAVLLMTPKDSILGILCSVTAATAVSFLVASVF
VRQQATNTTSDDLEGATRKMKSMKQGNVAASSAANDDGHSPLTAKHIVVACDAGMGSS
AMGASLLRKKIEKAGLPITVVNQAINNLDEKADIVITHRDLTDRAKRHAPNAQHISLN
NFLDNQLYDNLIARLQEAGEGRRPKAVAANDDVYRGENLSPALFTLGKEHICLGLKAS
NKEEAIRKAGEMLVANGCVEPEYIDAMLEREKLVSTYLGESIAVPHGTIESKDKVKKT
GIVICQYPAGVQFGPEKDEVARLVIGIAARNDEHLQVINNLTCTLDDPSLIERLATTT
DVKFVLELLSGQRAA"
misc_feature 317922..319835
/locus_tag="Tola_0283"
/note="PTS system mannitol-specific transporter subunit
IICBA; Provisional; Region: PRK15083"
/db_xref="CDD:185041"
misc_feature 317946..318929
/locus_tag="Tola_0283"
/note="Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
transport and metabolism]; Region: PtsG; cl00557"
/db_xref="CDD:200670"
misc_feature 319056..319316
/locus_tag="Tola_0283"
/note="PTS_IIB_mannitol: subunit IIB of enzyme II (EII) of
the mannitol-specific phosphoenolpyruvate:carbohydrate
phosphotransferase system (PTS). In this system, EII is a
mannitol-specific permease with two cytoplasmic domains
(IIA and IIB) and a transmembrane...; Region:
PTS_IIB_mannitol; cd05567"
/db_xref="CDD:99909"
misc_feature 319071..319097
/locus_tag="Tola_0283"
/note="active site"
/db_xref="CDD:99909"
misc_feature order(319074..319085,319089..319097)
/locus_tag="Tola_0283"
/note="P-loop; other site"
/db_xref="CDD:99909"
misc_feature 319074..319076
/locus_tag="Tola_0283"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99909"
misc_feature 319407..319820
/locus_tag="Tola_0283"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cd00211"
/db_xref="CDD:29266"
misc_feature order(319533..319535,319581..319583)
/locus_tag="Tola_0283"
/note="active site"
/db_xref="CDD:29266"
misc_feature 319581..319583
/locus_tag="Tola_0283"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29266"
gene 319899..321047
/locus_tag="Tola_0284"
/db_xref="GeneID:7884661"
CDS 319899..321047
/locus_tag="Tola_0284"
/inference="protein motif:PFAM:PF08125"
/note="PFAM: Mannitol dehydrogenase domain; Mannitol
dehydrogenase rossman domain;
KEGG: asa:ASA_3756 mannitol-1-phosphate 5-dehydrogenase"
/codon_start=1
/transl_table=11
/product="mannitol-1-phosphate 5-dehydrogenase"
/protein_id="YP_002891500.1"
/db_xref="GI:237807060"
/db_xref="InterPro:IPR000669"
/db_xref="InterPro:IPR013118"
/db_xref="InterPro:IPR013131"
/db_xref="GeneID:7884661"
/translation="MKALHFGAGNIGRGFIGKLLAESDAEVTFADANTQLVDQLNHSQ
EYHVRVVGDNQHTDVIRHIAAVQANSDDVINQIIKADIITTAVGPQVLAKIAATIARG
LQLRFEQGNYAPVNIIACENMVRGTSQLKQAVLAELPAQYHAQLEEYVGFVDSAVDRI
VPPAAANDEDPLAVTVESFSEWIVDKNQFRGDIPPVQGMELTDNLIAYVERKLFTLNT
GHIVTAYLGKLAGYKTIREAIADEEIQQAVRQAMQQSGEVLVKRYGFDRQLHHAYIEK
ILTRFANPYLVDEIDRVGRQPLRKLGAEDRLTKPLLGTLEYGLPNDALLKGIAAALHY
RNADDPQAVELQGWIEQDGVEAALLRATGLKADEPCVATIVAEYQRMA"
misc_feature 319899..321041
/locus_tag="Tola_0284"
/note="mannitol-1-phosphate 5-dehydrogenase; Provisional;
Region: PRK02318"
/db_xref="CDD:179414"
misc_feature 319899..320267
/locus_tag="Tola_0284"
/note="Mannitol dehydrogenase Rossmann domain; Region:
Mannitol_dh; pfam01232"
/db_xref="CDD:144722"
misc_feature 320340..321020
/locus_tag="Tola_0284"
/note="Mannitol dehydrogenase C-terminal domain; Region:
Mannitol_dh_C; pfam08125"
/db_xref="CDD:149275"
gene 321182..321718
/gene="mtlR"
/locus_tag="Tola_0285"
/db_xref="GeneID:7884662"
CDS 321182..321718
/gene="mtlR"
/locus_tag="Tola_0285"
/inference="protein motif:PFAM:PF05068"
/note="Acts as a repressor of the mtlAD operon"
/codon_start=1
/transl_table=11
/product="mannitol repressor protein"
/protein_id="YP_002891501.1"
/db_xref="GI:237807061"
/db_xref="InterPro:IPR007761"
/db_xref="GeneID:7884662"
/translation="MNKVKVSTYQEDAVFERLAEPENPRGFFIEVVDMLEDAVDQLMR
RAFRQEEYAVKYAIEPLLNGKGPLADLHIRLKLIFALGLISYEVSQDIERFIRLRDFL
VNDIHDHRFGEECVKDHLNRLHSLQNISMMQIDEPTDNADPVLQQLQLNRRDQVIRSA
LLLAVSGVLSELSKDSPI"
misc_feature 321203..321715
/gene="mtlR"
/locus_tag="Tola_0285"
/note="mannitol repressor protein; Provisional; Region:
mtlR; PRK11001"
/db_xref="CDD:182894"
gene complement(321992..323737)
/locus_tag="Tola_0286"
/db_xref="GeneID:7884663"
CDS complement(321992..323737)
/locus_tag="Tola_0286"
/inference="protein motif:TFAM:TIGR01427"
/note="TIGRFAM: PTS system, fructose subfamily, IIC
subunit; PTS system, fructose-specific, IIB subunnit;
PFAM: phosphotransferase system EIIC; phosphotransferase
system PTS fructose-specific IIB subunit;
KEGG: vha:VIBHAR_05960 PTS system fructose-specific IIBC
component"
/codon_start=1
/transl_table=11
/product="PTS system fructose subfamily transporter
subunit IIC"
/protein_id="YP_002891502.1"
/db_xref="GI:237807062"
/db_xref="InterPro:IPR003352"
/db_xref="InterPro:IPR003353"
/db_xref="InterPro:IPR006327"
/db_xref="InterPro:IPR013011"
/db_xref="InterPro:IPR013014"
/db_xref="GeneID:7884663"
/translation="MNIVIVTSCPSGIANSVIAAGLLEKAAASLGWNAVVECHNNIEP
AKLLTVDEISTADLVVVAGDNIDLARFTGKRVYQAGVMDAIPDAKAFLQTAAAAATVT
SAEAVASQQTQEKPKVSPMSKRIVAITACPTGVAHTFMAAEALEEEAKKRGYWIKVET
RGSVGAKNALTAEEIAQADVVIIAADIELDLSRFAGKKLYKTSTGAALKKTAQEMDHA
LATQNVFQGGASAAASHSGKAELPGVYKHLMTGVSHMLPIVVAGGLLIALSFVFGIEA
FKEEGTMAAALMKIGGASAFALMVPVMAGFIAFSIADRPGLAPGLIGGMLASSIGAGF
LGGIVAGFIAGYAAKAIADNVKLPQTMEALKPILIIPLFASLITGLAMIYVVGTPIAS
IMKGLTDFLTGMSGANAILLGIILGAMMCFDLGGPVNKVAYVFGTGLLASNPNVPSLP
MAAVMAAGMVPAIGMGIATFVARNKFIDSEREAGKASFVLGLCFISEGAIPFAARDPM
RVIPSTMAGGALAGALSMLFGCGLMAPHGGLFVLLIPGAISNALMYIVAIAAGSALTG
LMYATIKPSQEVQTA"
misc_feature complement(321995..323737)
/locus_tag="Tola_0286"
/note="PTS system fructose-specific transporter subunits
IIBC; Provisional; Region: PRK10712"
/db_xref="CDD:182667"
misc_feature complement(323459..323731)
/locus_tag="Tola_0286"
/note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of
the fructose-specific phosphoenolpyruvate:carbohydrate
phosphotransferase system (PTS). In this system, EII (also
referred to as FruAB) is a fructose-specific permease made
up of two proteins (FruA and...; Region: PTS_IIB_fructose;
cd05569"
/db_xref="CDD:99911"
misc_feature complement(order(323690..323698,323702..323713))
/locus_tag="Tola_0286"
/note="P-loop; other site"
/db_xref="CDD:99911"
misc_feature complement(order(323690..323695,323702..323707,
323711..323713))
/locus_tag="Tola_0286"
/note="active site"
/db_xref="CDD:99911"
misc_feature complement(323711..323713)
/locus_tag="Tola_0286"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99911"
misc_feature complement(323078..323365)
/locus_tag="Tola_0286"
/note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of
the fructose-specific phosphoenolpyruvate:carbohydrate
phosphotransferase system (PTS). In this system, EII (also
referred to as FruAB) is a fructose-specific permease made
up of two proteins (FruA and...; Region: PTS_IIB_fructose;
cd05569"
/db_xref="CDD:99911"
misc_feature complement(order(323324..323332,323336..323347))
/locus_tag="Tola_0286"
/note="P-loop; other site"
/db_xref="CDD:99911"
misc_feature complement(order(323324..323329,323336..323341,
323345..323347))
/locus_tag="Tola_0286"
/note="active site"
/db_xref="CDD:99911"
misc_feature complement(323345..323347)
/locus_tag="Tola_0286"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99911"
misc_feature complement(322019..323011)
/locus_tag="Tola_0286"
/note="Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
transport and metabolism]; Region: PtsG; cl00557"
/db_xref="CDD:200670"
gene complement(323749..324687)
/locus_tag="Tola_0287"
/db_xref="GeneID:7884664"
CDS complement(323749..324687)
/locus_tag="Tola_0287"
/inference="protein motif:TFAM:TIGR03168"
/note="TIGRFAM: 1-phosphofructokinase;
PFAM: PfkB domain protein;
KEGG: vch:VCA0517 1-phosphofructokinase"
/codon_start=1
/transl_table=11
/product="1-phosphofructokinase"
/protein_id="YP_002891503.1"
/db_xref="GI:237807063"
/db_xref="InterPro:IPR002173"
/db_xref="InterPro:IPR011611"
/db_xref="InterPro:IPR017583"
/db_xref="GeneID:7884664"
/translation="MSKPLLTVTLNPALDLTGHIGQIQVGSVNVVKSGSLHPAGKGIN
VARVLRDLGADVAVTGILGAGNQQAFRDLFKQCGLTDHFMTVPGDTRINVKMVEDSGD
VTDLNFPGVAVAEDELKEFEARLLRQAEQHEYIVVAGSLPRGISAEASRDLIAKLQQK
GAKVLFDSSKEALVKGLEAKPFLIKPNEVELAEWAGRPLETEAELRQEAEKLRAAGIT
NVVISRGADGVLWLADNEWWSACPPRMEVVSTVGAGDSMVAGFAWGMSQGMDKEQILR
LASAVSALAVTQISVGVPNKQQLADMMARIDVKRLG"
misc_feature complement(323755..324675)
/locus_tag="Tola_0287"
/note="Fructose-1-phosphate kinase and related
fructose-6-phosphate kinase (PfkB) [Carbohydrate transport
and metabolism]; Region: FruK; COG1105"
/db_xref="CDD:31302"
misc_feature complement(323860..324672)
/locus_tag="Tola_0287"
/note="1-phosphofructokinase (FruK), minor
6-phosphofructokinase (pfkB) and related sugar kinases.
FruK plays an important role in the predominant pathway
for fructose utilisation.This group also contains
tagatose-6-phophate kinase, an enzyme of the tagatose...;
Region: FruK_PfkB_like; cd01164"
/db_xref="CDD:29349"
misc_feature complement(order(324274..324276,324514..324516,
324520..324522,324538..324540,324550..324552))
/locus_tag="Tola_0287"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:29349"
misc_feature complement(order(323923..323925,323929..323931,
324001..324003,324019..324021,324127..324129,
324133..324135,324187..324189))
/locus_tag="Tola_0287"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:29349"
gene complement(324680..325813)
/locus_tag="Tola_0288"
/db_xref="GeneID:7884665"
CDS complement(324680..325813)
/locus_tag="Tola_0288"
/inference="protein motif:TFAM:TIGR01003"
/note="phosphoenolpyruvate (PEP)-dependent, sugar
transporting phosphotransferase system; catalyzes the
phosphorylation of incoming sugar substrates concomitant
with their translocation across the cell membrane; IIA is
phosphorylated by phospho-HP which then transfers the
phosphoryl group to the IIB componentr"
/codon_start=1
/transl_table=11
/product="bifunctional PTS system fructose-specific
transporter subunit IIA/HPr protein"
/protein_id="YP_002891504.1"
/db_xref="GI:237807064"
/db_xref="InterPro:IPR001020"
/db_xref="InterPro:IPR002114"
/db_xref="InterPro:IPR002178"
/db_xref="InterPro:IPR005698"
/db_xref="GeneID:7884665"
/translation="MLTLAEQDIQLGAKADDKQSAIRMVAQKMVDAGLIEAPYVEGML
RRETQNSTYLGNGIAIPHGTTDTREQVKQTGVRVLHFADGVNWGDGQTAYVVIGIAAR
SDEHLGILRQLTRVLADDSVADYLKHCKSTADLAKLLSGQKPTPTLLLDSSTVQLQTS
AQDIFGLQSTACVLLQNGGALDASGTAAIQASSPVWMGQGLWLARTNTGVKRTAVSLV
RPAAPFQHAGQPVQGLLLIAAQDALHKPVLDRLVDMISEQNVAQLWSAADSMKAVKLL
TEKPIEGLEGTFTITNPHGLHARPSATLVKVAKEFQSEIWVANLDGDGKSVNAKSLMK
IVSLGVKSGHRLQFIAKGDDAQQAISKIGQSIADGLGEGAGHE"
misc_feature complement(324695..325813)
/locus_tag="Tola_0288"
/note="bifunctional PTS system fructose-specific
transporter subunit IIA/HPr protein; Provisional; Region:
PRK11109"
/db_xref="CDD:182969"
misc_feature complement(325397..325804)
/locus_tag="Tola_0288"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cd00211"
/db_xref="CDD:29266"
misc_feature complement(order(325628..325630,325676..325678))
/locus_tag="Tola_0288"
/note="active site"
/db_xref="CDD:29266"
misc_feature complement(325628..325630)
/locus_tag="Tola_0288"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29266"
misc_feature complement(324716..324955)
/locus_tag="Tola_0288"
/note="Histidine-containing phosphocarrier protein
(HPr)-like proteins. HPr is a central component of the
bacterial phosphoenolpyruvate sugar phosphotransferase
system (PTS). The PTS catalyses the phosphorylation of
sugar substrates during their translocation...; Region:
PTS-HPr_like; cd00367"
/db_xref="CDD:29444"
misc_feature complement(324944..324955)
/locus_tag="Tola_0288"
/note="dimerization domain swap beta strand [polypeptide
binding]; other site"
/db_xref="CDD:29444"
misc_feature complement(order(324803..324808,324815..324826,
324887..324889,324896..324898,324908..324913,
324917..324922,324926..324928))
/locus_tag="Tola_0288"
/note="regulatory protein interface [polypeptide binding];
other site"
/db_xref="CDD:29444"
misc_feature complement(324923..324925)
/locus_tag="Tola_0288"
/note="active site"
/db_xref="CDD:29444"
misc_feature complement(324821..324823)
/locus_tag="Tola_0288"
/note="regulatory phosphorylation site [posttranslational
modification]; other site"
/db_xref="CDD:29444"
gene 326070..327065
/locus_tag="Tola_0289"
/db_xref="GeneID:7884666"
CDS 326070..327065
/locus_tag="Tola_0289"
/inference="protein motif:TFAM:TIGR02417"
/note="binds D-fructose as an inducer; involved in
regulation of operons for central pathways of carbon
metabolism"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator FruR"
/protein_id="YP_002891505.1"
/db_xref="GI:237807065"
/db_xref="InterPro:IPR000843"
/db_xref="InterPro:IPR001761"
/db_xref="InterPro:IPR012781"
/db_xref="GeneID:7884666"
/translation="MKLEEIARLAGVSRTTASYVVNGKAEQHRISEKTRERVMAVVNQ
YNYKPDQAATALRLGSSRLFGFILPDLENTSYARLAKLLEAGARAHGFQLIITCSDDN
PETEKALAEMLTSRRIDALLVSTVLEPYNDFYPRLQQKGLPVIAIDRALDDEKFASVI
SEDLDGAIRLTNSLLSPLPASIGLLGAVPDLGISHERERGFRAALRSADITGEPLIAY
GEHFSRSEGARICADWIARGVMPEALVTTSYVLLEGVLNTLQEHPELMKNLRLATFGD
NQLLDFLPVKVNALPQQFSLIAERALALALAATEHNYTPGVEVIPRRLKVRSHTG"
misc_feature 326070..327050
/locus_tag="Tola_0289"
/note="DNA-binding transcriptional regulator FruR;
Provisional; Region: PRK11303"
/db_xref="CDD:183083"
misc_feature 326082..326240
/locus_tag="Tola_0289"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature order(326103..326117,326121..326126,326133..326135,
326157..326162,326169..326171,326208..326210,
326217..326219,326226..326231,326235..326240)
/locus_tag="Tola_0289"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature 326208..326237
/locus_tag="Tola_0289"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature 326256..327044
/locus_tag="Tola_0289"
/note="Ligand binding domain of DNA transcription
repressor specific for fructose (FruR) and its close
homologs; Region: PBP1_FruR; cd06274"
/db_xref="CDD:107269"
misc_feature order(326280..326282,326310..326315,326319..326324,
326331..326333,326346..326348,326355..326357,
326361..326363,326415..326417,326826..326828,
326913..326915,326919..326921)
/locus_tag="Tola_0289"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107269"
misc_feature order(326292..326294,326304..326306,326505..326510,
326541..326552,326658..326660,326811..326813,
326892..326894)
/locus_tag="Tola_0289"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107269"
gene 327138..327605
/locus_tag="Tola_0290"
/db_xref="GeneID:7884667"
CDS 327138..327605
/locus_tag="Tola_0290"
/inference="protein motif:TFAM:TIGR00689"
/note="TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB
family; ribose 5-phosphate isomerase B;
PFAM: Ribose/galactose isomerase;
KEGG: pin:Ping_3554 sugar-phosphate isomerases,
RpiB/LacA/LacB family protein"
/codon_start=1
/transl_table=11
/product="RpiB/LacA/LacB family sugar-phosphate isomerase"
/protein_id="YP_002891506.1"
/db_xref="GI:237807066"
/db_xref="InterPro:IPR003500"
/db_xref="InterPro:IPR004785"
/db_xref="GeneID:7884667"
/translation="MKIAMASDHAGFSLKEEIKAYLQSQGHEVLDFGAHSEDACDLPD
TVYPAALAVGEGKADRGIFVDGVGYGSAMIANKIYGVFAAVCQDPFCANLARSHSDTN
VLCIGGKIIGSAIAMEIVKTWMTTEYLGHTEEKYRRRVGKVQEIAEKHLKKLS"
misc_feature 327141..327566
/locus_tag="Tola_0290"
/note="Ribose/Galactose Isomerase; Region: LacAB_rpiB;
pfam02502"
/db_xref="CDD:202262"
gene 327751..329121
/locus_tag="Tola_0291"
/db_xref="GeneID:7884668"
CDS 327751..329121
/locus_tag="Tola_0291"
/inference="protein motif:TFAM:TIGR00797"
/note="TIGRFAM: MATE efflux family protein;
PFAM: multi antimicrobial extrusion protein MatE;
KEGG: aha:AHA_1500 Na+ driven multidrug efflux pump"
/codon_start=1
/transl_table=11
/product="MATE efflux family protein"
/protein_id="YP_002891507.1"
/db_xref="GI:237807067"
/db_xref="InterPro:IPR002528"
/db_xref="GeneID:7884668"
/translation="MTSVSAVRSQSLFQITWPLFIDLALHFLTAALNTFMISHVSYQA
VAALSVGNQFFDVSITLFNFVGIGSSVVITQYLGAGQRDVARRVVQQAIGFNALIGLV
VALGVLFGATPILQLMNMPEHLQSMGHVYLQIIALCLLPEAIALCLAASLRAYGYTRE
AMYVTVIVNLVTLVGNALLLYGWFGLPQMSVAGVAWSTVAGRVIGVMLLVWLIRRRIG
LQLRWAECCRFSSDIISKIMKIGLPAAGENLSWMLQMMVITSFVALLGDKMLATQSYF
FQISLFVMLFGIAIGLGTEIMIGHLVGAGELDQAYHRLMRSLKIGLVVTVLSVALVVV
SGPYLMELFTADEVILATAGQLFLLSLILEPGRTFNIIVISSLRATGDARFPFRMALI
SMWGIAIPIAYLCGIHWAWGLVGIWCGFVVDEWVRGLTMFWRWRSRRWEKKVLVQRTA
PANQAH"
misc_feature 327781..329100
/locus_tag="Tola_0291"
/note="Na+-driven multidrug efflux pump [Defense
mechanisms]; Region: NorM; COG0534"
/db_xref="CDD:30880"
misc_feature 327802..328284
/locus_tag="Tola_0291"
/note="MatE; Region: MatE; pfam01554"
/db_xref="CDD:190033"
misc_feature 328477..328962
/locus_tag="Tola_0291"
/note="MatE; Region: MatE; pfam01554"
/db_xref="CDD:190033"
gene complement(329146..330540)
/locus_tag="Tola_0292"
/db_xref="GeneID:7884669"
CDS complement(329146..330540)
/locus_tag="Tola_0292"
/inference="protein motif:TFAM:TIGR01845"
/note="TIGRFAM: RND efflux system, outer membrane
lipoprotein, NodT family;
PFAM: outer membrane efflux protein;
KEGG: hch:HCH_01213 outer membrane protein"
/codon_start=1
/transl_table=11
/product="NodT family RND efflux system outer membrane
lipoprotein"
/protein_id="YP_002891508.1"
/db_xref="GI:237807068"
/db_xref="InterPro:IPR003423"
/db_xref="InterPro:IPR010131"
/db_xref="GeneID:7884669"
/translation="MNKLSPLYLALCILTACSQHTASPPQKDLSPATPAQWQNNLFSA
QEVLKQAHWWQAFQDPALDQLIQQVLEKNNDLAVAALKVRQARLNAGLTATNLTPDLS
AALSAEKQKTWQQTAAVNSNDTATYNTALSLNYELDLWGKLADERAAANFEAEATEQD
RQASALSLIGTTATLYWQQGYLNEQIRLNQESLTYTRQALKIANAHYQAGANSKLDVL
QAEQSVASQLASHELLLQQREENQNALAILLDQPPGATLPLPSALPVTPIPDIPAGLP
ADVLAQRPDVKAAELRVRSDYATRQYTAKSYYPTFSLTGALSTGSEQLHSVLRNPTGS
IGTGLTLPFIEWQTTRLSIAKQQVVYEQTVRNFRQTFYTALSEVENQLSARQHYLNAA
SQLVHSLALAQQTETITAVRYHAGEIEMQNWLEQQENRRTAEKELLDNRYQQLTTQLA
LYQALGGNPARQQN"
misc_feature complement(329227..330501)
/locus_tag="Tola_0292"
/note="efflux transporter, outer membrane factor (OMF)
lipoprotein, NodT family; Region: outer_NodT; TIGR01845"
/db_xref="CDD:162557"
gene complement(330533..332512)
/locus_tag="Tola_0293"
/db_xref="GeneID:7884670"
CDS complement(330533..332512)
/locus_tag="Tola_0293"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter related; protein of unknown
function DUF214;
SMART: AAA ATPase;
KEGG: glo:Glov_0394 ABC transporter related"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002891509.1"
/db_xref="GI:237807069"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR003838"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7884670"
/translation="MKMMQTPPLMELQQISRHFQTGDERLTVLHEISLSIYAGEMVAI
IGASGSGKSTLMNILGCLDRPSSGDYRVNGRSTATLSSDQLADLRRDCFGFIFQHYHL
LSHLKAEGNVEIPAIYAAQHKHTRIQRARSLLQRLGLADKQSNRPGQLSGGQQQRVSI
ARALMNGGDVILADEPTGALDSQSGKEVMQILRQLHRQGHTIVLVTHDQNIAAHAERV
IEISDGRIIADHRQTASHIELPDNDASLPEQPAEPHTFRWWSRQWTRFSEAFRMAWIS
MLTHRMRTLLTMLGIIIGITAVVSVVAVGQGARNKVISDISSMGTNTIDVYPGKDWGD
RNASAIQTLTPQDLPLLSGQIYTDSVTPNVSTNALLRDGGQALKAMVYGVAGQYFQVK
DLQMVFGKAFDQRAVEQLEPVVVIDHNTRIKLYGEHINPVGKVILLNNLPCRIIGVTA
EKKSSFDTQNLNAWLPYTSAMYRLMGQHYFSSVSVRIKDGVSSGIAEQQIIKLLTRAH
GRKDFYTRNSDSILQTIEKTTATLTLLISSIAVISLIVGGIGVMNIMLVSVTERTREI
GIRMAVGARQQDILQQFLIEAVMVCLLGGSLGILLSFAVSAVFSMLVSSMQMAFSIWS
LLAAFLCSSLIGVLFGYLPARNAARLDPIEALARE"
misc_feature complement(330536..332491)
/locus_tag="Tola_0293"
/note="macrolide transporter ATP-binding /permease
protein; Provisional; Region: PRK10535"
/db_xref="CDD:182528"
misc_feature complement(331835..332485)
/locus_tag="Tola_0293"
/note="This family is comprised of MJ0796 ATP-binding
cassette, macrolide-specific ABC-type efflux carrier
(MacAB), and proteins involved in cell division (FtsE),
and release of liporoteins from the cytoplasmic membrane
(LolCDE). They are clustered together...; Region:
ABC_MJ0796_Lo1CDE_FtsE; cd03255"
/db_xref="CDD:73014"
misc_feature complement(332354..332377)
/locus_tag="Tola_0293"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73014"
misc_feature complement(order(331892..331894,331988..331993,
332219..332221,332351..332359,332363..332368))
/locus_tag="Tola_0293"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73014"
misc_feature complement(332219..332230)
/locus_tag="Tola_0293"
/note="Q-loop/lid; other site"
/db_xref="CDD:73014"
misc_feature complement(332036..332065)
/locus_tag="Tola_0293"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73014"
misc_feature complement(331988..332005)
/locus_tag="Tola_0293"
/note="Walker B; other site"
/db_xref="CDD:73014"
misc_feature complement(331970..331981)
/locus_tag="Tola_0293"
/note="D-loop; other site"
/db_xref="CDD:73014"
misc_feature complement(331886..331906)
/locus_tag="Tola_0293"
/note="H-loop/switch region; other site"
/db_xref="CDD:73014"
misc_feature complement(331004..331588)
/locus_tag="Tola_0293"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:205030"
misc_feature complement(330557..330859)
/locus_tag="Tola_0293"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
gene complement(332509..333711)
/locus_tag="Tola_0294"
/db_xref="GeneID:7884671"
CDS complement(332509..333711)
/locus_tag="Tola_0294"
/inference="protein motif:TFAM:TIGR01730"
/note="TIGRFAM: efflux transporter, RND family, MFP
subunit;
PFAM: secretion protein HlyD family protein;
KEGG: yen:YE1200 HlyD family secretion protein"
/codon_start=1
/transl_table=11
/product="RND family efflux transporter MFP subunit"
/protein_id="YP_002891510.1"
/db_xref="GI:237807070"
/db_xref="InterPro:IPR006143"
/db_xref="GeneID:7884671"
/translation="MVFLKKRWLYFLLPLLAMFAVFAVLQRPEPVQYITSPVRYGNIE
QTVLASGTLNAVNQVNVGSQVSGQLKSLKVALGDQVTKDQLIAEIDPILQQYTLRQAQ
ASLDSAKAQKQAKQALLRQYELAYRRQQQMWRQDATSKASLEEAAATLDTTRAAINQL
DAEITSAQVSVDTAKANLGYTRITAPISGTVVSIVTKEGQTVAASQSVPTIIKLANLD
TMTVKAEISEADVIHVKPGMSVWFTTLGDPDKRYHATLRAIEPASTSDSSDDDSSSSS
SSSSDSSSSSSSAVYYNGLFDIANMDHKLRVSMTAQVTIVSGEAKNVLLVPIAAVENN
AQQQSTVRVLEQGKVISKIIQTGLKDSLNIQIISGLKEKEQVILGDSQSSTDNAGNSG
QMMPPPGP"
misc_feature complement(332563..333702)
/locus_tag="Tola_0294"
/note="macrolide transporter subunit MacA; Provisional;
Region: PRK11578"
/db_xref="CDD:183211"
misc_feature complement(333415..333543)
/locus_tag="Tola_0294"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature complement(<332920..333168)
/locus_tag="Tola_0294"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene complement(333808..334719)
/locus_tag="Tola_0295"
/db_xref="GeneID:7884672"
CDS complement(333808..334719)
/locus_tag="Tola_0295"
/inference="protein motif:PFAM:PF00892"
/note="PFAM: protein of unknown function DUF6
transmembrane;
KEGG: aha:AHA_2858 drug/metabolite exporter family
transporter"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891511.1"
/db_xref="GI:237807071"
/db_xref="InterPro:IPR000620"
/db_xref="GeneID:7884672"
/translation="MSPKDWGFALLIVFAWGFNFVIIHWGLDGVPPLLLGALRFTLVA
FPAILFVPRPRISWRWLLAYGLTISFGQFAFLFTAMKIGMPAGIASLVLQSQVLFTLL
FAALLLREHWLPHQPFTLGIAALGLFVLATQQGQNGMTLAGFLLTVAAAASWGMGNII
NRYITREGSLNLLSLVVWSGLIPPVPFFIASYWLEGPALIAESLQQIQLHSVLAVVYL
ALVATLYGYVAWGRLLQRYPVAQVAPLTLLVPLVGLMCARLFLDEQLTRWQWLGILLV
LLGLVLNIFWPRYLRLRRQSAQQQPKA"
misc_feature complement(333838..334719)
/locus_tag="Tola_0295"
/note="O-acetylserine/cysteine export protein;
Provisional; Region: PRK11453"
/db_xref="CDD:183142"
gene complement(334815..335900)
/locus_tag="Tola_0296"
/db_xref="GeneID:7884673"
CDS complement(334815..335900)
/locus_tag="Tola_0296"
/inference="protein motif:TFAM:TIGR02142"
/note="KEGG: dar:Daro_2784 molybdate ABC transporter
ATP-binding protein;
TIGRFAM: molybdate ABC transporter, ATPase subunit;
PFAM: ABC transporter related; TOBE domain protein;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="molybdate ABC transporter ATPase"
/protein_id="YP_002891512.1"
/db_xref="GI:237807072"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005116"
/db_xref="InterPro:IPR011868"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:7884673"
/translation="MHDIEIRLCWSRSEFQLDVALQLPGQGVSALFGPSGCGKTTCLR
AIAGLEKLPDAYIAIGDEVWQDSARNIFIPPHQRALGYVFQEASLFPHLSVEQNLLFG
VKRLPPQHPKADQSYICQLLGIQSLLQRHPHQLSGGERQRVAIARALLLAPRILLMDE
PLSALDQARKQEILPYLERLHRQLSIPIIYVSHAADEVSRLADHLVLLQQGKVVASGA
LNETLTRLDLPADFTEQAGVVWEMTLHELEDDGLAELKTKTSDQMSLLVAQTAQALGS
SVRCRIDARDVSLSLHKAVDSSILNLLPATITGMVPADTPGHLLIKLQAGQQPLLARI
TQRSAKALQLQSGMTVWAQIKAVALLE"
misc_feature complement(335250..335894)
/locus_tag="Tola_0296"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(334821..335891)
/locus_tag="Tola_0296"
/note="molybdenum ABC transporter, ATP-binding protein;
Region: modC_ABC; TIGR02142"
/db_xref="CDD:131197"
misc_feature complement(335781..335804)
/locus_tag="Tola_0296"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(335322..335324,335421..335426,
335646..335648,335778..335786,335790..335795))
/locus_tag="Tola_0296"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(335646..335657)
/locus_tag="Tola_0296"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(335469..335498)
/locus_tag="Tola_0296"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(335421..335438)
/locus_tag="Tola_0296"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(335403..335414)
/locus_tag="Tola_0296"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(335316..335336)
/locus_tag="Tola_0296"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
misc_feature complement(334821..335009)
/locus_tag="Tola_0296"
/note="TOBE domain; Region: TOBE; pfam03459"
/db_xref="CDD:202645"
gene complement(335893..336570)
/locus_tag="Tola_0297"
/db_xref="GeneID:7884674"
CDS complement(335893..336570)
/locus_tag="Tola_0297"
/inference="protein motif:TFAM:TIGR02141"
/note="TIGRFAM: molybdate ABC transporter, inner membrane
subunit;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: molybdate ABC transporter, inner membrane subunit"
/codon_start=1
/transl_table=11
/product="molybdate ABC transporter permease"
/protein_id="YP_002891513.1"
/db_xref="GI:237807073"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR011867"
/db_xref="GeneID:7884674"
/translation="MTEQDWSTVWLTLKLALLVTGILLLIATPLAWWLAQTRSRYKPL
FNAALSLPMVLPPTVLGFYLLLLLGPHGPAGKLLIALDWQALPFSFNGIVLGAVLHSL
PFAIQPIQNAFEAIGRRPLEVAATLRASPVDCFFSVALPLARPGLVTAAVMAFCHSIG
EFGVVLMIGGSIPGETKVLSILLYEHVENQEYQQAHWLAGGMVIFAMLALMLIYWFGN
SRRTHHA"
misc_feature complement(335908..>336486)
/locus_tag="Tola_0297"
/note="ABC-type sulfate transport system, permease
component [Posttranslational modification, protein
turnover, chaperones]; Region: CysU; COG0555"
/db_xref="CDD:30901"
misc_feature complement(335935..>336330)
/locus_tag="Tola_0297"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(335998..336000,336028..336030,
336037..336039,336073..336075,336289..336291))
/locus_tag="Tola_0297"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(335935..335940,335947..335952,
335959..335964,335968..335973,335980..335982,
335998..336000,336028..336033,336070..336075,
336082..336093,336112..336114,336121..336126,
336166..336168,336217..336219,336226..336231,
336241..336243,336247..336252,336259..336261,
336265..336267,336271..336276))
/locus_tag="Tola_0297"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(336145..336147,336157..336162,
336178..336216))
/locus_tag="Tola_0297"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(336584..337435)
/locus_tag="Tola_0298"
/db_xref="GeneID:7884675"
CDS complement(336584..337435)
/locus_tag="Tola_0298"
/inference="protein motif:PFAM:PF03459"
/note="PFAM: TOBE domain protein; regulatory protein LysR;
KEGG: dar:Daro_1477 molybdenum-binding protein,
N-terminal:molybdenum-pterin binding protein"
/codon_start=1
/transl_table=11
/product="ModE family transcriptional regulator"
/protein_id="YP_002891514.1"
/db_xref="GI:237807074"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR004606"
/db_xref="InterPro:IPR005116"
/db_xref="GeneID:7884675"
/translation="MSRRLTSTQPSLLGELKLCTEVGPSLGDSRIQLLEAIERLGSLS
QAAKSIPLSYRAAWDALDEMNNLAEQPLVIRTAGGKNGGGTQLTAYGKQAVALYRALQ
TEYQQALARIQQQLQRASCQQGNDYYDIGQFRRLLRRISMRSSARNQFIGTVVAMHTA
PVDFEVTLQLSDNVQLIAVITRESAETLGIALGQELYALVKSSSVMLVTDRQLKLSPR
NQLWGQISKIHQGPVNSEVVINLPGDKSVCAVVTTESVNTMQLMENQEVCAAFKASSV
LLCGYSG"
misc_feature complement(<337124..337390)
/locus_tag="Tola_0298"
/note="N-terminal domain of molybdenum-binding protein
[General function prediction only]; Region: ModE; COG2005"
/db_xref="CDD:32188"
misc_feature complement(336602..337348)
/locus_tag="Tola_0298"
/note="DNA-binding transcriptional regulator ModE;
Provisional; Region: PRK10676"
/db_xref="CDD:182640"
misc_feature complement(336806..336994)
/locus_tag="Tola_0298"
/note="TOBE domain; Region: TOBE_2; cl01440"
/db_xref="CDD:207413"
misc_feature complement(336602..336799)
/locus_tag="Tola_0298"
/note="Molybdopterin-binding protein [Coenzyme
metabolism]; Region: MopI; COG3585"
/db_xref="CDD:33385"
gene complement(337613..338377)
/locus_tag="Tola_0299"
/db_xref="GeneID:7884676"
CDS complement(337613..338377)
/locus_tag="Tola_0299"
/inference="protein motif:PFAM:PF00196"
/note="PFAM: regulatory protein LuxR; Autoinducer-binding
domain protein;
SMART: regulatory protein LuxR;
KEGG: asa:ASA_3763 transcriptional activator AsaR"
/codon_start=1
/transl_table=11
/product="transcriptional regulator, LuxR family"
/protein_id="YP_002891515.1"
/db_xref="GI:237807075"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR005143"
/db_xref="GeneID:7884676"
/translation="MQNFTFPQEEQHFRIQNCKTPQMLANQLTILCAANNFEYYQLCL
TLRRGLQQTDLTLLTQTPDNWAEHYAKNNTIQNDSLYQRAQTQSRPLFWQSEAKPEHE
NFLPMDCWRQFGMEEGIAVPLHGPAGFCGYFALSRHKKEPIRLQDFFHLSYLGHILQE
QAIQLFSPEQSNLSGREKECLFWVSEGKTSWEIAQILGITERTVNFHLNNAIRKSGCK
NRYQTVAKNIITGELAHTVTRINLTHLLQSPQSLSA"
misc_feature complement(337685..338338)
/locus_tag="Tola_0299"
/note="DNA-binding transcriptional activator SdiA;
Provisional; Region: PRK10188"
/db_xref="CDD:182292"
misc_feature complement(337892..338320)
/locus_tag="Tola_0299"
/note="Autoinducer binding domain; Region: Autoind_bind;
pfam03472"
/db_xref="CDD:202654"
misc_feature complement(337700..337861)
/locus_tag="Tola_0299"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(337718..337720,337751..337765,
337769..337774,337778..337783,337805..337813,
337850..337858))
/locus_tag="Tola_0299"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(337703..337705,337712..337720,
337811..337813,337817..337819,337823..337825))
/locus_tag="Tola_0299"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene 338618..339982
/locus_tag="Tola_0300"
/db_xref="GeneID:7884677"
CDS 338618..339982
/locus_tag="Tola_0300"
/EC_number="2.3.1.157"
/inference="protein motif:TFAM:TIGR01173"
/note="KEGG: aha:AHA_4260 UDP-N-acetylglucosamine
pyrophosphorylase/glucosamine-1-phosphate
N-acetyltransferase;
TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase;
PFAM: transferase hexapeptide repeat containing protein"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylglucosamine pyrophosphorylase"
/protein_id="YP_002891516.1"
/db_xref="GI:237807076"
/db_xref="InterPro:IPR001451"
/db_xref="InterPro:IPR005882"
/db_xref="GeneID:7884677"
/translation="MSLHVVILAAGKGTRMRSSLPKVLHPVAGRPMVSHVIDTARSLN
AEKIHLVYGHGGEAMQARLNDADVEWVLQAEQLGTGHAVAQAMPTIPDHAKVLVLYGD
TPLISPVTLETLLTIQPANGIGLLTVSLANPTGYGRILRADGQVVGIVEQKDATAEQQ
LINEVNTGVLVAPAKQLKQWLSGLTNLNAQGEYYLTDVIAAAHHSGSSIQTAQPVCAQ
EVEGANNRLQLAQLERFYQKRAAEQLMLEGVTLLDPARFDLRGTLQCGEDVLLDVNVI
IEGQVELGHRVQIGAGCVLKNCRIADDSIISPYSIIEGSVLAEGCTVGPFARLRPGAE
LAAQAHVGNFVELKNARLGLGSKAGHLSYLGDSEIGANVNIGAGTITCNYDGANKHKT
IIEDDVFVGSDTQLVAPVRVAKGATLGAGSTITRDVGEDELVLTRVRQHHITGWHRPV
KQKK"
misc_feature 338618..339976
/locus_tag="Tola_0300"
/note="bifunctional N-acetylglucosamine-1-phosphate
uridyltransferase/glucosamine-1-phosphate
acetyltransferase; Provisional; Region: glmU; PRK09451"
/db_xref="CDD:181867"
misc_feature 338630..339304
/locus_tag="Tola_0300"
/note="N-terminal domain of bacterial GlmU; Region:
GT2_GlmU_N_bac; cd02540"
/db_xref="CDD:133020"
misc_feature order(338639..338647,338768..338770,338852..338854,
338861..338863,338915..338917,338921..338923)
/locus_tag="Tola_0300"
/note="Substrate binding site; other site"
/db_xref="CDD:133020"
misc_feature order(338921..338923,339287..339289)
/locus_tag="Tola_0300"
/note="Mg++ binding site; other site"
/db_xref="CDD:133020"
misc_feature 339359..339937
/locus_tag="Tola_0300"
/note="N-acetyl-glucosamine-1-phosphate uridyltransferase
(GlmU), C-terminal left-handed beta-helix (LbH)
acetyltransferase domain: GlmU is also known as
UDP-N-acetylglucosamine pyrophosphorylase. It is a
bifunctional bacterial enzyme that catalyzes two...;
Region: LbH_GlmU_C; cd03353"
/db_xref="CDD:100044"
misc_feature order(339605..339607,339653..339655,339659..339661,
339695..339697,339704..339706,339737..339748,
339761..339769,339782..339784,339812..339814,
339818..339823,339872..339877,339926..339928)
/locus_tag="Tola_0300"
/note="active site"
/db_xref="CDD:100044"
misc_feature order(339605..339607,339653..339655,339659..339661,
339695..339697,339704..339706,339737..339745,
339764..339766,339782..339784)
/locus_tag="Tola_0300"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100044"
misc_feature order(339746..339748,339761..339763,339767..339769,
339818..339823,339872..339877,339926..339928)
/locus_tag="Tola_0300"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:100044"
gene 340118..340891
/locus_tag="Tola_0301"
/db_xref="GeneID:7884678"
CDS 340118..340891
/locus_tag="Tola_0301"
/inference="protein motif:PFAM:PF08220"
/note="PFAM: regulatory protein DeoR; Helix-turn-helix
type 11 domain protein;
SMART: regulatory protein DeoR;
KEGG: aha:AHA_4255 glucitol operon repressor"
/codon_start=1
/transl_table=11
/product="Cro/CI family transcriptional regulator"
/protein_id="YP_002891517.1"
/db_xref="GI:237807077"
/db_xref="InterPro:IPR001034"
/db_xref="InterPro:IPR013196"
/db_xref="InterPro:IPR014036"
/db_xref="GeneID:7884678"
/translation="MIKRNTQQRRHAIISLLNEQGEVSVEDLSQRFETSEVTIRKDLA
ELERSGVLLRRYGGAIPLPSEILAEEVPAKVSKRKLAIAQAAVQHIRDHNRIIIDSGS
TTGAMIPLLATKRGLVVMTNSLTVAQALRELENEPTLLMTGGTWDPHSEAFQGQVAEQ
VLRSYDFDQLFIGADGVDPARGTITFNELVGLSRVMAEVAREVIVLVDSEKFGRRIPN
LELPWSAIDTLITDDGIGEELKVQIEQHGVRVIRVPVTG"
misc_feature 340136..340879
/locus_tag="Tola_0301"
/note="DNA-bindng transcriptional repressor SrlR;
Provisional; Region: srlR; PRK10434"
/db_xref="CDD:182457"
misc_feature 340142..340297
/locus_tag="Tola_0301"
/note="helix_turn_helix, Deoxyribose operon repressor;
Region: HTH_DEOR; smart00420"
/db_xref="CDD:197714"
misc_feature 340352..340819
/locus_tag="Tola_0301"
/note="DeoR C terminal sensor domain; Region: DeoRC;
pfam00455"
/db_xref="CDD:201239"
misc_feature order(340415..340417,340421..340426,340481..340483,
340634..340639)
/locus_tag="Tola_0301"
/note="active site"
/db_xref="CDD:73163"
gene 340996..342831
/locus_tag="Tola_0302"
/db_xref="GeneID:7884679"
CDS 340996..342831
/locus_tag="Tola_0302"
/inference="protein motif:TFAM:TIGR01135"
/note="TIGRFAM: glucosamine/fructose-6-phosphate
aminotransferase, isomerizing;
PFAM: glutamine amidotransferase class-II; sugar isomerase
(SIS);
KEGG: asa:ASA_4342
glucosamine-fructose-6-phosphateaminotransferase"
/codon_start=1
/transl_table=11
/product="glucosamine/fructose-6-phosphate
aminotransferase"
/protein_id="YP_002891518.1"
/db_xref="GI:237807078"
/db_xref="InterPro:IPR000583"
/db_xref="InterPro:IPR001347"
/db_xref="InterPro:IPR005855"
/db_xref="GeneID:7884679"
/translation="MCGIVGAVAQRDIAEILVEGLRRLEYRGYDSAGVAIISPQGELQ
RVRRLGKVQELAAALEQQPLSGGIGIAHTRWATHGEPSEANAHPHVSNGDLAVVHNGI
IENYEELREKLQGLGYEFVSQTDTEVIVHLVHHYLKTSDSLLQALQTTVKDLRGAYGT
VLMDRRDPSRLVVARSGSPLVIGRGLGENFIASDQLALLPVTRRFIFLEEGDVAEVTR
RGVQIFNVAGQPVERAEIESELSHDAGDKGHYRHYMQKEIYEQPQAILNTLEGRLVGN
HIVPEAFGTHAREIFQKVKHVQIVACGTSYHSGMVARYWFESLAGVSCNIEIASEFRY
RKSVVHPNSLIITLSQSGETADTLAALRLAKELGYMASLTLCNVPGSSLVRESDLAFM
TRAGAEIGVASTKAFTTQLTGLLMLVTAIGRCNGQMTETDERCVASALQALPSQIEQA
LKLDKQIEPLAEQFANKQHSLFLGRGDQYPIAMEGALKLKEISYIHAEAYAAGELKHG
PLALIDSEMPIIVVAPNNELLEKLKSNVEEVRARGGLLYVFADRAAGFSSDDTMRVMP
MESVADIIAPIVYTIPMQLLAYHIALIKGTDVDQPRNLAKSVTVE"
misc_feature 340996..342828
/locus_tag="Tola_0302"
/note="glucosamine--fructose-6-phosphate aminotransferase;
Reviewed; Region: PRK00331"
/db_xref="CDD:178980"
misc_feature 340999..341643
/locus_tag="Tola_0302"
/note="Glutamine amidotransferases class-II
(Gn-AT)_GFAT-type. This domain is found at the N-terminus
of glucosamine-6P synthase (GlmS, or GFAT in humans). The
glutaminase domain catalyzes amide nitrogen transfer from
glutamine to the appropriate substrate. In...; Region:
GFAT; cd00714"
/db_xref="CDD:48478"
misc_feature order(340999..341001,341074..341076,341215..341220,
341224..341229,341254..341256,341293..341298,
341368..341373)
/locus_tag="Tola_0302"
/note="glutaminase active site [active]"
/db_xref="CDD:48478"
misc_feature 341881..342261
/locus_tag="Tola_0302"
/note="SIS (Sugar ISomerase) domain repeat 1 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_1; cd05008"
/db_xref="CDD:88405"
misc_feature order(341899..341904,341932..341937,341944..341949,
341968..341970,341974..341976,341986..341988,
341995..341997,342061..342063)
/locus_tag="Tola_0302"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88405"
misc_feature order(341905..341910,342040..342048)
/locus_tag="Tola_0302"
/note="active site"
/db_xref="CDD:88405"
misc_feature 342358..342822
/locus_tag="Tola_0302"
/note="SIS (Sugar ISomerase) domain repeat 2 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_2; cd05009"
/db_xref="CDD:88406"
misc_feature order(342421..342423,342463..342465,342475..342477,
342481..342483,342487..342489,342493..342495,
342505..342507,342511..342519,342523..342534,
342583..342588,342598..342600,342604..342609,
342799..342804,342817..342819)
/locus_tag="Tola_0302"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88406"
misc_feature order(342457..342459,342466..342468)
/locus_tag="Tola_0302"
/note="active site"
/db_xref="CDD:88406"
gene 342991..343821
/locus_tag="Tola_0303"
/db_xref="GeneID:7884680"
CDS 342991..343821
/locus_tag="Tola_0303"
/inference="protein motif:PFAM:PF08721"
/note="PFAM: TnsA endonuclease;
KEGG: asa:ASA_4341 transposon Tn7 transposition protein
TnsA"
/codon_start=1
/transl_table=11
/product="TnsA endonuclease"
/protein_id="YP_002891519.1"
/db_xref="GI:237807079"
/db_xref="InterPro:IPR014832"
/db_xref="InterPro:IPR014833"
/db_xref="GeneID:7884680"
/translation="MARKNYFLSEKLIEQRIKDGRGQGYVEKYQPWLRVQDVPSDGRS
HRIFSHKTKRIHHLLSDLELATFLLFDWSESVLDIREQFPLIRDDTRIIAQREGIKHP
VTQGVDLVMTTDFLIDAKDPFPAQFAVQVKYQESFKDPRTIEKLDLERCYWQQKGIPW
VTITEQDIDVQIRKNIEWLYSVKIDDITSTKQISETMAFLPAAVARFSEFSVIDACKH
IDLAYELELGQSLRDLRLLMANRLAVFDIRKPVHQLKIADIKFMQLNGMEPFLYVENQ
"
misc_feature 343210..343485
/locus_tag="Tola_0303"
/note="TnsA endonuclease N terminal; Region:
Tn7_Tnp_TnsA_N; pfam08722"
/db_xref="CDD:204043"
misc_feature 343489..343731
/locus_tag="Tola_0303"
/note="TnsA endonuclease C terminal; Region:
Tn7_Tnp_TnsA_C; pfam08721"
/db_xref="CDD:149698"
gene 343805..345892
/locus_tag="Tola_0304"
/db_xref="GeneID:7884681"
CDS 343805..345892
/locus_tag="Tola_0304"
/inference="protein motif:PFAM:PF00665"
/note="PFAM: Integrase catalytic region;
KEGG: spc:Sputcn32_3935 putative transposase"
/codon_start=1
/transl_table=11
/product="integrase catalytic subunit"
/protein_id="YP_002891520.1"
/db_xref="GI:237807080"
/db_xref="InterPro:IPR001584"
/db_xref="GeneID:7884681"
/translation="MWKINEVLSFDDVRYRILHIHQSEIIWINIDENKGIPKLVLHLQ
LIEWMDNGRLVRSQDPYAYLIHEEPLVDSAAFKKREHAYQVISPVIFDDQCFDTTVRA
QRIKHVEQTGIATKANIYRLLRQYWQRGQTLNALLPDFKNQGAPNKKRAATNTNKVGR
KRQYGDSVGIKIDENIERLMRLAIEEKLLASTQLSIAKVLRDFKSKFIQYYPDVSKEN
LPTRRQFEYFYKREYDQSVRVKARTDDGIYKKDVRPLTGTATAASFGPGSRYEIDATI
ADIYLVADDDRSKIIGRPTLYIVIDVFSRMIVGFYIGFDNPSYVVAMQAFINACVDKT
EICHSLGLNISVDDWPCIGLPDVVLADRGELMSNQLDSLISTFNVRIESAPPRRGDAK
GIVERCFKTLQAEFKPYAPGVVVGNKIKKHGEQDYRLNAAITISDFARIIIRSILFRN
NHHVLTKYDRDADLPIDMPSIPIYLWRWGLQNRTGRLRTVDPEFLRIAVLPREKVSVS
TSGVCLWGMYYTSSEMLREGWLLRSQEVNRPDKLEAAYDPGCADTIYLFPQSGSRGYW
ICSLTEQSRRFRGMTFWQVWDIQKEEKHSQANAKFDEDVHRRELDDFIQGVIAESKKL
LPNIQESNQQRIQQIRSNKKEAREQERQQRTKSNTVQPEQNIAEVIPLQSSEDDYSYP
SFIPGLFETDEDE"
misc_feature 344600..345022
/locus_tag="Tola_0304"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
gene 345895..347556
/locus_tag="Tola_0305"
/db_xref="GeneID:7884682"
CDS 345895..347556
/locus_tag="Tola_0305"
/inference="protein motif:SMART:SM00382"
/note="SMART: AAA ATPase;
KEGG: ssn:SSON_3893 ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ATPase AAA"
/protein_id="YP_002891521.1"
/db_xref="GI:237807081"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:7884682"
/translation="MTTSRITAIYRDTGVEAYKANPLIEALPPLLDAYDATLDLKATL
KFEASDLAQSRVIRAHNICRIQDDFFQPLSSHMALNERVSIMIRGGYVGRNPQNGMLQ
RHLQNGYERVQRGELSAFRYDDVGSTAQSLLLIGCSGCGKTTSLKRILSAYPQVIYHP
EMNLEQVVYLKIDCSHNGSLKEICLNFFRALDRALGENYEKRYGLKKHGIETMLALMA
QIANAHALGLLVIDEIQHLSRSKSGGSQEMLNFFVTMVNTIGVPVMLIGTPKARDIFE
ADLRSARRGAGFGAIYWEPMPQYVKGAPNNEWIGFTNNLWKLQLLQKRDLLLSDDIRA
LWFDLSQGVMDIVVKLFILAQLRALAIGKERITTGLLQQVYDDDLIPVHPMLDALRSG
IPERIARYSDLMVPEMDKRLIQLQQKISSISQETPATLAMKELPTEDEQRIYMMLQED
YDSTLLVKTIRNAFSQHPQLTRQQLLPIILEWLMTSVGEVDTPSEIAKPKKQTSIIKS
KDWDTLQTDSLRYMYSQNSAPTAIYNEMVKAGYILKLSDILQKAG"
misc_feature 346273..346719
/locus_tag="Tola_0305"
/note="AAA domain; Region: AAA_22; pfam13401"
/db_xref="CDD:205579"
misc_feature 346285..346737
/locus_tag="Tola_0305"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 346300..346323
/locus_tag="Tola_0305"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(346303..346326,346588..346590,346696..346698)
/locus_tag="Tola_0305"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 346576..346593
/locus_tag="Tola_0305"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 347410..347553
/locus_tag="Tola_0305"
/note="Tn7 transposition regulator TnsC; Region:
Tn7_TnsC_Int; pfam11426"
/db_xref="CDD:151865"
gene 347561..349078
/locus_tag="Tola_0306"
/db_xref="GeneID:7884683"
CDS 347561..349078
/locus_tag="Tola_0306"
/inference="similar to AA sequence:KEGG:Sputcn32_3931"
/note="KEGG: spc:Sputcn32_3931 transposition protein"
/codon_start=1
/transl_table=11
/product="transposition protein"
/protein_id="YP_002891522.1"
/db_xref="GI:237807082"
/db_xref="GeneID:7884683"
/translation="MKLPAPHPNELIYSTVARAGVYFGLVSPKQLLDEVFADRKVIAT
LDLPSHLQSIVGLLSGTGLYDLETLVYKHTLFPLYAPFVPEHIRQKAIKRMSDRADGA
VHLMLGVATSRIKSVRTFRFCPICMERQLHTYGEYYWQRDWFLPELPVCPEHGCLIDT
SIHLDEHRHQFVPLNPACFTTKTSNKYVANDLPLALAAAELLEQPAQQSPTFAQWTHF
YHEIATESGCGRGKQVDHEKILNLVCSRFDIRYLENKGLLKQSQSNSFWLRSIFRKHR
KSFSFFEHLIVWQALVPALSVSEIFIKVRRYAPETVLKKSQSSVDNAISISDECRMYR
QKWEALVLQHGVKPARHQATGGSLYAWLYRHDRDWLLTFNEQQKRPLKTVNNRVDWHL
RDRQLVRHLIRIHLLSENHPVHQRMSATWLLNQLPHKNSVAKKLHKLPLTHQFLVRYA
ESVTEYQLRRISQFIVESREKHMEIRRWSLFRNVGLSEQRITPDTMKILDSLTYL"
gene 349090..350706
/locus_tag="Tola_0307"
/db_xref="GeneID:7884684"
CDS 349090..350706
/locus_tag="Tola_0307"
/inference="similar to AA sequence:KEGG:Sputcn32_3930"
/note="KEGG: spc:Sputcn32_3930 transposition regulatory
protein"
/codon_start=1
/transl_table=11
/product="transposition regulatory protein"
/protein_id="YP_002891523.1"
/db_xref="GI:237807083"
/db_xref="InterPro:IPR001220"
/db_xref="GeneID:7884684"
/translation="MVPIEGFDENVRIVHIGDLFKKIGTKDWKINVFGSPIQDKKYTR
FANLPLLSRDKIINATKPDRSSVDRIIHLRPKHQIESVFLSDFSELSDYESVVRAEGT
QKAFKIKQRNQPTIYIPQLELAKAIFLIDSYLCRACTSTTHLSLEFDVKPKNSEGHVD
IHVLKTTTFPLDAFDQNGTRMILAWLLTNKAALQSFESIYRRLDKERQSDKTWERWTF
NFDPPDMTNWKFHVKGKMSHKQQAYLVHEIIGVEIDSEMPDSVQFHNPSFIRRKPKEH
TALEGGGDSQSWHVRPDELSIDDIESASDENNTIVLDDGRLWVSFSKPCSVTKKTKEK
DITKVSENGDNGILAGEKVSTSDAHQGGTLPSADVGGKQDLSDKEKECASRFQSFNDM
LKILEHKHGCTKLDTKMIELPKVGRSRKHLLANGLQRVIQYVKIKTTNVTVRLLEIDT
SDGEKMISTKILYGAGDKDWLENFKSIREGVISKRLSWPTALLDDLYGEKGHKGTNHP
QHQGAQAGNIPVDALESWAGRVFADIERIR"
gene 350834..351115
/locus_tag="Tola_0308"
/db_xref="GeneID:7884685"
CDS 350834..351115
/locus_tag="Tola_0308"
/inference="protein motif:PFAM:PF02001"
/note="PFAM: protein of unknown function DUF134;
KEGG: ppr:PBPRB1238 putative DNA-binding protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891524.1"
/db_xref="GI:237807084"
/db_xref="InterPro:IPR002852"
/db_xref="GeneID:7884685"
/translation="MGRPKIPRNICGKPADSCFKPNGIPMSELERIDLAPDEFEALRL
VDLQGMLQQDAAVVMGVSRQTLANLVKAARCKVVDCLVHGKALMMHQPD"
misc_feature 350834..351094
/locus_tag="Tola_0308"
/note="Predicted DNA-binding proteins [General function
prediction only]; Region: COG1342"
/db_xref="CDD:31533"
gene complement(351241..351366)
/locus_tag="Tola_0309"
/db_xref="GeneID:7884686"
CDS complement(351241..351366)
/locus_tag="Tola_0309"
/inference="protein motif:TFAM:TIGR01022"
/note="TIGRFAM: ribosomal protein L36;
PFAM: ribosomal protein L36;
KEGG: vsa:VSAL_I0889 50S ribosomal protein L36"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L36"
/protein_id="YP_002891525.1"
/db_xref="GI:237807085"
/db_xref="InterPro:IPR000473"
/db_xref="GeneID:7884686"
/translation="MKVLSSLKSAKTRHPDCQIVKRRGRVFVICKTNPRFKARQG"
misc_feature complement(351244..351366)
/locus_tag="Tola_0309"
/note="50S ribosomal protein L36; Validated; Region: rpmJ;
PRK00831"
/db_xref="CDD:179138"
gene 351558..351929
/locus_tag="Tola_0310"
/db_xref="GeneID:7884687"
CDS 351558..351929
/locus_tag="Tola_0310"
/inference="similar to AA sequence:KEGG:MCA0357"
/note="KEGG: mca:MCA0357 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891526.1"
/db_xref="GI:237807086"
/db_xref="GeneID:7884687"
/translation="MLLLIGLALIGLSAGVLSGLFGIGGGILIVPALMYGLGFSQKLA
TGTSLAILLPPVGIAAVMEYYRQGAVDMKAAMIIAVMVVVGSWFGSKFSVGIDPVMMK
LLFGIFLILLGGYIIYDATSG"
gene 352107..352631
/locus_tag="Tola_0311"
/db_xref="GeneID:7884688"
CDS 352107..352631
/locus_tag="Tola_0311"
/inference="protein motif:PFAM:PF02600"
/note="PFAM: Disulphide bond formation protein DsbB;
KEGG: asa:ASA_2303 disulfide bond formation protein"
/codon_start=1
/transl_table=11
/product="Disulfide bond formation protein DsbB"
/protein_id="YP_002891527.1"
/db_xref="GI:237807087"
/db_xref="InterPro:IPR003752"
/db_xref="GeneID:7884688"
/translation="MTFWLRHITRERSAWLLLGLSAVFLEVCALLFQHGLGLRPCLMC
IYERLAVIGLFGSALIALIDPAKSLWRWGGLILWGLSIYRGLQLSLRHVDYLLHPSPF
NSCAFFPDFPAWLPLDIWFPWWFKPLAECSERQWNLWGWELPQWLVLIFSVYLIVWIV
IVAANLLTHKYLAE"
misc_feature 352119..352619
/locus_tag="Tola_0311"
/note="disulfide bond formation protein B; Provisional;
Region: PRK01749"
/db_xref="CDD:179331"
gene 352730..353152
/locus_tag="Tola_0312"
/db_xref="GeneID:7884689"
CDS 352730..353152
/locus_tag="Tola_0312"
/inference="protein motif:PFAM:PF01475"
/note="PFAM: ferric-uptake regulator;
KEGG: amc:MADE_01084 ferric uptake regulator"
/codon_start=1
/transl_table=11
/product="ferric uptake regulator, Fur family"
/protein_id="YP_002891528.1"
/db_xref="GI:237807088"
/db_xref="InterPro:IPR002481"
/db_xref="GeneID:7884689"
/translation="MSIKKLKKAGLKITNQRMSVLDYLSDADERHFSAEDIFRDLRLN
GADVGQATVYRVLNQLEKAGMLERHHFEGSKAYYELKSKEHHDHLVCLRCGKIVEFFD
PLIEQRQKEIAEQYGIQLSHHHLCLFGYCSDPDCKLKN"
misc_feature 352775..353122
/locus_tag="Tola_0312"
/note="Ferric uptake regulator(Fur) and related
metalloregulatory proteins; typically iron-dependent,
DNA-binding repressors and activators; Region: Fur_like;
cd07153"
/db_xref="CDD:133478"
misc_feature order(352820..352822,352964..352966,352985..352987,
352991..352993,353024..353026)
/locus_tag="Tola_0312"
/note="metal binding site 2 [ion binding]; metal-binding
site"
/db_xref="CDD:133478"
misc_feature 352874..352918
/locus_tag="Tola_0312"
/note="putative DNA binding helix; other site"
/db_xref="CDD:133478"
misc_feature order(352982..352984,352988..352990,353045..353047,
353096..353098)
/locus_tag="Tola_0312"
/note="metal binding site 1 [ion binding]; metal-binding
site"
/db_xref="CDD:133478"
misc_feature order(352997..353005,353051..353056,353081..353089,
353093..353119)
/locus_tag="Tola_0312"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133478"
misc_feature order(353000..353002,353009..353011,353120..353122)
/locus_tag="Tola_0312"
/note="structural Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:133478"
gene 353447..353992
/locus_tag="Tola_0313"
/db_xref="GeneID:7884690"
CDS 353447..353992
/locus_tag="Tola_0313"
/inference="similar to AA sequence:KEGG:Sfri_1975"
/note="KEGG: sfr:Sfri_1975 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891529.1"
/db_xref="GI:237807089"
/db_xref="GeneID:7884690"
/translation="MITAIPMKEDRVASHFTKADSFVFVNENGDVLSRKANPALNANC
SGKKDLLAMLLAENAKRVIVRNIGERILGKLLESQFAVFQTSCGRQNVQELVSAQANK
LVLMTSSSQGRQSLNYEAKQANGGCGCEHDGHEPHQSCCGQDGQHEHSHHQHGAGRCC
QNRSDAQKTGHGHGKGRCCHS"
misc_feature 353447..353740
/locus_tag="Tola_0313"
/note="This CD represents a family of iron-molybdenum
cluster-binding proteins that includes NifB, NifX, and
NifY, all of which are involved in the synthesis of an
iron-molybdenum cofactor (FeMo-co) that binds the active
site of the dinitrogenase enzyme. This...; Region:
NifX_NifB; cl00252"
/db_xref="CDD:206933"
gene 353989..354156
/locus_tag="Tola_0314"
/db_xref="GeneID:7884691"
CDS 353989..354156
/locus_tag="Tola_0314"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891530.1"
/db_xref="GI:237807090"
/db_xref="GeneID:7884691"
/translation="MNIWIAVLAGFISLLIIAVAMMGFFFLLTKAVEKSVLSEEKNNN
AESGKETTIHF"
gene 354257..354904
/locus_tag="Tola_0315"
/db_xref="GeneID:7884692"
CDS 354257..354904
/locus_tag="Tola_0315"
/EC_number="1.11.1.15"
/inference="protein motif:PRIAM:1.11.1.15"
/note="PFAM: alkyl hydroperoxide reductase/ Thiol specific
antioxidant/ Mal allergen; Redoxin domain protein;
KEGG: swi:Swit_3743 1-Cys peroxiredoxin"
/codon_start=1
/transl_table=11
/product="peroxiredoxin"
/protein_id="YP_002891531.1"
/db_xref="GI:237807091"
/db_xref="InterPro:IPR000866"
/db_xref="InterPro:IPR013740"
/db_xref="GeneID:7884692"
/translation="MTEAGNNVAMPRLNEAAPSFTAKTTHGMLSLSDYKGKWLILFSH
PADFTPVCTTEFMGFAKAGGDFKALNCELLGLSIDGVHAHIAWARSIKDNFGVEINFP
IIADLNMAVARSYGMVQPGASDTSAVRATFVIDPDGVLRAMLYYPMSNGRSVAEILRL
VKALQTTDNNVCATPENWQPGDEVIVPPPATTMAAEARKSEGFNYTDWYFSKRKL"
misc_feature 354284..354901
/locus_tag="Tola_0315"
/note="peroxiredoxin; Provisional; Region: PRK13189"
/db_xref="CDD:183884"
misc_feature 354293..354898
/locus_tag="Tola_0315"
/note="Peroxiredoxin (PRX) family, 1-cys PRX subfamily;
composed of PRXs containing only one conserved cysteine,
which serves as the peroxidatic cysteine. They are
homodimeric thiol-specific antioxidant (TSA) proteins that
confer a protective role in cells by...; Region: PRX_1cys;
cd03016"
/db_xref="CDD:48565"
misc_feature order(354293..354295,354404..354406,354413..354421,
354428..354430,354524..354526,354533..354535,
354602..354604,354635..354637,354677..354685,
354689..354697,354701..354718,354722..354724,
354731..354733,354743..354748,354773..354778,
354782..354787,354881..354883,354890..354892)
/locus_tag="Tola_0315"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48565"
misc_feature order(354329..354331,354488..354496,354500..354505,
354509..354514,354518..354523,354548..354550,
354575..354580,354608..354610,354629..354634,
354821..354823,354875..354877)
/locus_tag="Tola_0315"
/note="decamer (pentamer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:48565"
misc_feature order(354401..354403,354410..354412,354641..354643)
/locus_tag="Tola_0315"
/note="catalytic triad [active]"
/db_xref="CDD:48565"
gene 354959..355936
/locus_tag="Tola_0316"
/db_xref="GeneID:7884693"
CDS 354959..355936
/locus_tag="Tola_0316"
/inference="protein motif:PFAM:PF03595"
/note="PFAM: C4-dicarboxylate transporter/malic acid
transport protein;
KEGG: ppr:PBPRB1236 hypothetical protein"
/codon_start=1
/transl_table=11
/product="C4-dicarboxylate transporter/malic acid
transport protein"
/protein_id="YP_002891532.1"
/db_xref="GI:237807092"
/db_xref="InterPro:IPR004695"
/db_xref="GeneID:7884693"
/translation="MSNIQTDHGIVAEQSRLLHFPVSFFSIVMGLSGVTLAWKAAGQP
TPAAIPFMLMLFTSLVMVVITSFYAVKLLRYPSAVLDELRHPVRLNFFPAFSISLLLL
SVAWQDYSQISFGLWLCGAVIQFCLTLYVMSSWIHHSHYTLSHANPSWFIPVVGNIIV
PITGSHFAYTEVSWFFFSIGLVFWLVLLTIVLYRLFFHEPLPARLTPMLFILLAPPSV
GFVSYSGLVGGLDNFGRVLYYIALFLSLLLFSNVLRFIRLPFFLSSWAYSFPVAALTI
ATKKMFMFTALPLFNVLFMALISILSLLVLWLVVRTCKAVIAGELCRPE"
misc_feature 355013..355846
/locus_tag="Tola_0316"
/note="Tellurite-resistance/Dicarboxylate Transporter
(TDT) family includes SLAC1 (Slow Anion Channel-Associated
1); Region: TDT_SLAC1_like; cd09323"
/db_xref="CDD:187763"
misc_feature 355763..355765
/locus_tag="Tola_0316"
/note="gating phenylalanine in ion channel; other site"
/db_xref="CDD:187763"
gene 355988..357697
/locus_tag="Tola_0317"
/db_xref="GeneID:7884694"
CDS 355988..357697
/locus_tag="Tola_0317"
/inference="protein motif:PFAM:PF00070"
/note="PFAM: FAD-dependent pyridine nucleotide-disulphide
oxidoreductase; pyridine nucleotide-disulphide
oxidoreductase dimerisation region;
SMART: Rhodanese domain protein;
KEGG: sfr:Sfri_0585 FAD-dependent pyridine
nucleotide-disulphide oxidoreductase"
/codon_start=1
/transl_table=11
/product="FAD-dependent pyridine nucleotide-disulfide
oxidoreductase"
/protein_id="YP_002891533.1"
/db_xref="GI:237807093"
/db_xref="InterPro:IPR000103"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR001763"
/db_xref="InterPro:IPR004099"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:7884694"
/translation="MTKIVIIGGVAGGASAAARARRLSETAEIIVLERGEFVSFANCG
LPYHISGEIEARDALLLQTPESFRHRFNVDVRVFNEVIAIDKHKKEVTVRRVLTGEIY
QESYDKLLLSPGASPVKPPIPGINSHYVFSLRNIPDMDQILSSLLLNQPQHATVVGGG
FIGLEMVEALHHRGIKVTLLELSDQVMAPVDREMANMLHQELVEKGVDLRLNTGLAAV
TELEIQPAEPEATGEYDKQIEHTNTLELMLSTGEMLKTGLVVLAIGVKPETMLANQAG
IELGARGGIKVDARMCTSDPDIFAVGDVVETEDFVTALPSLVPLAGPANRQGRIAADN
MLGRREIYRRTQGTSICKLFDMAIGSTGLNEKTLKRLKLPYEKIYVHTASHASYYPGA
HPVTLKLLFNPTDGEILGAQAAGLDGVDKRIDVLAVAQRARMSVYTLQDLELTYAPPF
GSARDVVNQAGMVASNILKGDEAVCHSEELLLGASDQIVLDVRNPPELEASGTFPDAI
NIPLDQLRQRLHELPKDKEILVACQVGLRGHVACRMLIQHGFKARNLTGGFKTYQMVT
TKF"
misc_feature 356054..357370
/locus_tag="Tola_0317"
/note="CoA-disulfide reductase; Region: CoA_CoA_reduc;
TIGR03385"
/db_xref="CDD:163244"
misc_feature 356444..356644
/locus_tag="Tola_0317"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
misc_feature 357029..357346
/locus_tag="Tola_0317"
/note="Pyridine nucleotide-disulphide oxidoreductase,
dimerisation domain; Region: Pyr_redox_dim; pfam02852"
/db_xref="CDD:202431"
misc_feature 357437..357676
/locus_tag="Tola_0317"
/note="Member of the Rhodanese Homology Domain
superfamily. Included in this CD are the Lactococcus
lactis NADH oxidase, Bacillus cereus NADH dehydrogenase,
and Bacteroides thetaiotaomicron pyridine
nucleotide-disulphide oxidoreductase, and similar...;
Region: RHOD_Pyr_redox; cd01524"
/db_xref="CDD:29087"
misc_feature 357581..357583
/locus_tag="Tola_0317"
/note="active site residue [active]"
/db_xref="CDD:29087"
gene 357727..358071
/locus_tag="Tola_0318"
/db_xref="GeneID:7884695"
CDS 357727..358071
/locus_tag="Tola_0318"
/inference="protein motif:TFAM:TIGR00778"
/note="TIGRFAM: alkylhydroperoxidase like protein, AhpD
family;
PFAM: Carboxymuconolactone decarboxylase;
KEGG: mmw:Mmwyl1_1812 alkylhydroperoxidase"
/codon_start=1
/transl_table=11
/product="alkylhydroperoxidase"
/protein_id="YP_002891534.1"
/db_xref="GI:237807094"
/db_xref="InterPro:IPR003779"
/db_xref="InterPro:IPR004675"
/db_xref="GeneID:7884695"
/translation="MAKSYKEINQDQRQFGSAYRKASPDTMNAFLALHKAAMVEGAVS
IKHKELIATGIAIAARCDGCIGAHVAAALKAGATKQELIETIDVAVLMGGGPAIIYGT
QALAAVEELSAE"
misc_feature 357796..358047
/locus_tag="Tola_0318"
/note="Carboxymuconolactone decarboxylase family; Region:
CMD; pfam02627"
/db_xref="CDD:202318"
gene 358125..358550
/locus_tag="Tola_0319"
/db_xref="GeneID:7884696"
CDS 358125..358550
/locus_tag="Tola_0319"
/inference="protein motif:PFAM:PF03061"
/note="PFAM: thioesterase superfamily protein;
KEGG: sbn:Sbal195_1431 thioesterase superfamily protein"
/codon_start=1
/transl_table=11
/product="thioesterase superfamily protein"
/protein_id="YP_002891535.1"
/db_xref="GI:237807095"
/db_xref="InterPro:IPR003736"
/db_xref="InterPro:IPR006683"
/db_xref="GeneID:7884696"
/translation="MKTYQACLQSHAHCVVCSDGSTNPHSLQLSFKQITENEVAADYQ
VDKKHQGYTDLLHGGIASTLLDAAMTHCLLSKGIEALTAELNVRFHTPVLVGDSVQVI
GRLISQRRGIYLLEATLSVAKQICVKATGKFIQPKGGVI"
misc_feature 358203..358526
/locus_tag="Tola_0319"
/note="PaaI_thioesterase is a tetrameric acyl-CoA
thioesterase with a hot dog fold and one of several
proteins responsible for phenylacetic acid (PA)
degradation in bacteria. Although orthologs of PaaI exist
in archaea and eukaryotes, their function has not...;
Region: PaaI_thioesterase; cd03443"
/db_xref="CDD:48038"
misc_feature order(358290..358292,358368..358370,358389..358400)
/locus_tag="Tola_0319"
/note="CoenzymeA binding site [chemical binding]; other
site"
/db_xref="CDD:48038"
misc_feature order(358293..358295,358299..358301,358308..358310,
358371..358385,358389..358391)
/locus_tag="Tola_0319"
/note="subunit interaction site [polypeptide binding];
other site"
/db_xref="CDD:48038"
misc_feature order(358296..358298,358320..358325,358332..358337,
358368..358370)
/locus_tag="Tola_0319"
/note="PHB binding site; other site"
/db_xref="CDD:48038"
gene 358552..359394
/locus_tag="Tola_0320"
/db_xref="GeneID:7884697"
CDS 358552..359394
/locus_tag="Tola_0320"
/inference="protein motif:PFAM:PF00753"
/note="PFAM: beta-lactamase domain protein;
KEGG: pca:Pcar_1589 beta-lactamase superfamily hydrolase"
/codon_start=1
/transl_table=11
/product="beta-lactamase domain-containing protein"
/protein_id="YP_002891536.1"
/db_xref="GI:237807096"
/db_xref="InterPro:IPR001279"
/db_xref="InterPro:IPR001734"
/db_xref="GeneID:7884697"
/translation="MSCRFELTVICDNHAKNELLSEHGLSFHILADGLTILFDTGGGE
TLLPNAMKLGIDLANCTHLVLSHGHYDHTGGIAQMLAKNTHCSVIAHPFILSERYSRH
ADRPVKRIGMPVSVRAVLQQLDPVRLHCSPVASFISDNIGITGFIPRTHVFEDTGGPF
YLDETGQFADLIPDDQALWINTPQGLVVILGCCHSGVINTVEYIRQLNDGASVAGIIG
GLHLLHASAERLEQTIIYLKKLKPQFIYAGHCTGDDVIVKLRENLRDTAVGQFFAGMQ
IGTE"
misc_feature 358567..359346
/locus_tag="Tola_0320"
/note="Metal-dependent hydrolases of the beta-lactamase
superfamily II [General function prediction only]; Region:
COG1237"
/db_xref="CDD:31430"
gene 359424..359762
/locus_tag="Tola_0321"
/db_xref="GeneID:7884698"
CDS 359424..359762
/locus_tag="Tola_0321"
/inference="protein motif:SMART:SM00450"
/note="SMART: Rhodanese domain protein;
KEGG: sdy:SDY_1936 thiosulfate:cyanide sulfurtransferase
(rhodanese)"
/codon_start=1
/transl_table=11
/product="rhodanese domain-containing protein"
/protein_id="YP_002891537.1"
/db_xref="GI:237807097"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:7884698"
/translation="MFRVFLLFTALTGCFTVSAKEWLIDVRTAAEYTIEHADGAANIE
YQQIVIGAQQAGIEKQDTVHLYCRSGRRAEIAKELLIQNGYQKVENLGSLQDAESWAK
TSHLAVATNH"
misc_feature 359490..359696
/locus_tag="Tola_0321"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cd00158"
/db_xref="CDD:29073"
misc_feature 359622..359624
/locus_tag="Tola_0321"
/note="active site residue [active]"
/db_xref="CDD:29073"
gene complement(359770..360378)
/locus_tag="Tola_0322"
/db_xref="GeneID:7884699"
CDS complement(359770..360378)
/locus_tag="Tola_0322"
/inference="protein motif:PFAM:PF08242"
/note="PFAM: Methyltransferase type 12; Methyltransferase
type 11;
KEGG: gbm:Gbem_0757 methyltransferase type 11"
/codon_start=1
/transl_table=11
/product="type 12 methyltransferase"
/protein_id="YP_002891538.1"
/db_xref="GI:237807098"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:7884699"
/translation="MSDFFDNAAKEWDTKHQRVAQAKAIAQIIEQTIPLTRATKALEF
GCGTGLLGFNLIEKVGEMTFSDTSRGMLSEVENKLKISACTSAKIVDLNVAKIVDRYD
LIFSSMVLHHIADHKQTIADLSQSLHPEGYLCICDLDKEDGLFHSKETVPHHGFERAE
IKQEFQNSGLNVIHSCTGFVNRKIINGQEVDFPVFLLIGQKK"
misc_feature complement(359938..360276)
/locus_tag="Tola_0322"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:206018"
misc_feature complement(359980..360255)
/locus_tag="Tola_0322"
/note="Methyltransferase domain; Region: Methyltransf_12;
pfam08242"
/db_xref="CDD:203886"
misc_feature complement(order(360058..360060,360103..360108,
360178..360183,360229..360249))
/locus_tag="Tola_0322"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(360443..361036)
/locus_tag="Tola_0323"
/db_xref="GeneID:7884700"
CDS complement(360443..361036)
/locus_tag="Tola_0323"
/inference="similar to AA sequence:KEGG:Mlg_1406"
/note="KEGG: aeh:Mlg_1406 methyltransferase type 11"
/codon_start=1
/transl_table=11
/product="methyltransferase type 11"
/protein_id="YP_002891539.1"
/db_xref="GI:237807099"
/db_xref="GeneID:7884700"
/translation="MWNEKYSDPRFIYGTAPNDFLKQSVHHFHPGGNILCIAEGEGRN
AVWLAELGFNVTAVDASEVGLSKGLTLAKSKGVKVDWIHADLQHYNPGKQAWDGVVAI
FAHFPPDLRSQVHADCVESLKEGGVLLLEAYTPEQLEFKTGGPSNPDWLMTPEILEQE
LRGLTFERLQKVERKIIEGIGHTGTGSVVQVIGVRNS"
misc_feature complement(360635..360940)
/locus_tag="Tola_0323"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(360731..360733,360779..360787,
360857..360862,360908..360928))
/locus_tag="Tola_0323"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 361155..362216
/locus_tag="Tola_0324"
/db_xref="GeneID:7884701"
CDS 361155..362216
/locus_tag="Tola_0324"
/inference="protein motif:PFAM:PF03601"
/note="PFAM: conserved hypothetical protein;
KEGG: pap:PSPA7_6170 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891540.1"
/db_xref="GI:237807100"
/db_xref="InterPro:IPR004630"
/db_xref="GeneID:7884701"
/translation="MSQYIRFLLNKKDEAESNCIGLICAASVALAGIFMAQSNIAQHW
GLSALTIAIALGIVLGNTVYPHISHACGAGVGIAKQQLLRIGIVLYGLRITFQQIAGV
GVTAILTDLLVLSSTFLLAYWLGTRIFKLERDSVLLIGAGSSICGAAAVMATEPVVQA
QASKVSIAVATVVVFGTAGMFLYPMFYHLGTTLLPIFKNQNSYGVYVGSTIHEVAQVF
AAGQAIGTKAADTAVIVKMIRVMMLAPFLLILSGWLRFNSVKGSAQSRKITIPWFAVF
FIVMAGINSLQWLPSTLTQSLIVLDNFLLAMAMAALGLTTHLGGVRAAGLKPLMLGGI
LFIYLIFGGGCINWLVAIF"
misc_feature 361215..362144
/locus_tag="Tola_0324"
/note="Conserved hypothetical protein 698; Region:
Cons_hypoth698; cl01075"
/db_xref="CDD:141086"
gene complement(362352..362828)
/locus_tag="Tola_0325"
/db_xref="GeneID:7884136"
CDS complement(362352..362828)
/locus_tag="Tola_0325"
/inference="protein motif:PFAM:PF00210"
/note="PFAM: Ferritin Dps family protein;
KEGG: bba:Bd1236 DNA-binding stress protein"
/codon_start=1
/transl_table=11
/product="ferritin Dps family protein"
/protein_id="YP_002891541.1"
/db_xref="GI:237807101"
/db_xref="InterPro:IPR002177"
/db_xref="InterPro:IPR008331"
/db_xref="GeneID:7884136"
/translation="MSAQAINIGINESDRLDIATGLSRLLADSYTLYLKTHYYHWNVT
GPMFNTLHLMFETQYNELALAVDLIAERIRALGVYAPGTYLEFAKLTVIAEDTDVPKA
QEMIKNLVAGQEAVVRTARSLFSVVEKANDEASADLLTQRIQLHEKTAWMLRSLLE"
misc_feature complement(362355..362816)
/locus_tag="Tola_0325"
/note="DNA-binding ferritin-like protein (oxidative damage
protectant) [Inorganic ion transport and metabolism];
Region: Dps; COG0783"
/db_xref="CDD:31126"
misc_feature complement(362358..362768)
/locus_tag="Tola_0325"
/note="DPS protein, ferritin-like diiron-binding domain;
Region: DPS; cd01043"
/db_xref="CDD:153102"
misc_feature complement(order(362616..362621,362628..362630,
362640..362642,362673..362675,362706..362711,
362715..362717,362727..362732))
/locus_tag="Tola_0325"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:153102"
misc_feature complement(order(362616..362618,362628..362630,
362661..362663,362673..362675,362709..362711))
/locus_tag="Tola_0325"
/note="DPS ferroxidase diiron center [ion binding]; other
site"
/db_xref="CDD:153102"
misc_feature complement(order(362406..362411,362430..362432))
/locus_tag="Tola_0325"
/note="ion pore; other site"
/db_xref="CDD:153102"
gene complement(363278..364099)
/locus_tag="Tola_0326"
/db_xref="GeneID:7884137"
CDS complement(363278..364099)
/locus_tag="Tola_0326"
/inference="protein motif:TFAM:TIGR00099"
/note="TIGRFAM: Cof-like hydrolase; HAD-superfamily
hydrolase, subfamily IIB;
PFAM: Haloacid dehalogenase domain protein hydrolase type
3; Haloacid dehalogenase domain protein hydrolase;
sucrose-6F-phosphate phosphohydrolase;
KEGG: asa:ASA_3565 HAD superfamily hydrolase"
/codon_start=1
/transl_table=11
/product="cof family hydrolase"
/protein_id="YP_002891542.1"
/db_xref="GI:237807102"
/db_xref="InterPro:IPR000150"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006379"
/db_xref="InterPro:IPR006380"
/db_xref="InterPro:IPR013200"
/db_xref="GeneID:7884137"
/translation="MADIAVIALDMDGTLLTSDHTVTRETVDTLRQARDKGIEVILVT
GRHHMMACPVHHQLALETPLICSNGAYIFDFQAKRITAGNPLHDWQWQQLLPLIESLQ
LDVICHFSDGIGHQPDNVHIAKIKNHLSTLPPEHYPHFIEHSSLATLCNTHVPLWKIE
IAHATPAAIDAFIDALPDGLAITHDRTAPNGLEIVNTGSSKGNRLAEWVAGKGIALDQ
VIAFGDNHNDISMFQQVGLGVAMGNATPEIQQYADFVTCSNDDSGIASALRRWVL"
misc_feature complement(363281..364084)
/locus_tag="Tola_0326"
/note="pyridoxal phosphate (PLP) phosphatase; Provisional;
Region: PRK10530"
/db_xref="CDD:182523"
misc_feature complement(<363839..364084)
/locus_tag="Tola_0326"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature complement(order(363965..363970,364064..364072))
/locus_tag="Tola_0326"
/note="active site"
/db_xref="CDD:119389"
misc_feature complement(364055..364072)
/locus_tag="Tola_0326"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature complement(363968..363970)
/locus_tag="Tola_0326"
/note="motif II; other site"
/db_xref="CDD:119389"
misc_feature complement(363311..>363547)
/locus_tag="Tola_0326"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:212620"
gene 364318..365127
/locus_tag="Tola_0327"
/db_xref="GeneID:7884138"
CDS 364318..365127
/locus_tag="Tola_0327"
/EC_number="3.6.1.27"
/inference="protein motif:TFAM:TIGR00753"
/note="KEGG: mfa:Mfla_2527 undecaprenyl-diphosphatase;
TIGRFAM: undecaprenol kinase;
PFAM: Bacitracin resistance protein BacA"
/codon_start=1
/transl_table=11
/product="undecaprenol kinase"
/protein_id="YP_002891543.1"
/db_xref="GI:237807103"
/db_xref="InterPro:IPR003824"
/db_xref="GeneID:7884138"
/translation="MSDILNSLIMGVVEGITEFLPVSSTGHLIVTKELLKFEGSDTFE
IVIQLGGVLAVLWFYFKTILQQVKSVATDAAVRRFWMAVIVAFLPAACIGLAFHHYIT
EYLFNSVTVACSLIVGGVIMWWIEGVAFKPRTLAFEQITLKQALAIGCAQLCALIPGV
SRSASTIMGGMLTGLDRSTATGFSFFLSIPTLGAASIYSLLKDLNGVGEHGILNISIG
LISSFIVSLLSIGWLLRYISKHNFRGFAVYRIVVGIIILALSYFGFFSPSV"
misc_feature 364318..365103
/locus_tag="Tola_0327"
/note="undecaprenyl pyrophosphate phosphatase; Reviewed;
Region: PRK00281"
/db_xref="CDD:178958"
gene 365487..367020
/locus_tag="Tola_R0018"
/db_xref="GeneID:7884139"
rRNA 365487..367020
/locus_tag="Tola_R0018"
/product="16S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7884139"
gene 367070..367145
/locus_tag="Tola_R0019"
/note="tRNA-Glu2"
/db_xref="GeneID:7884140"
tRNA 367070..367145
/locus_tag="Tola_R0019"
/product="tRNA-Glu"
/db_xref="GeneID:7884140"
gene 367283..370169
/locus_tag="Tola_R0020"
/db_xref="GeneID:7884141"
rRNA 367283..370169
/locus_tag="Tola_R0020"
/product="23S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7884141"
gene 370298..370411
/locus_tag="Tola_R0021"
/db_xref="GeneID:7884142"
rRNA 370298..370411
/locus_tag="Tola_R0021"
/product="5S ribosomal RNA"
/note="RNAmmer 1.2, Lagesen et al., Nucleic Acids Res.
Apr2 2, 2007"
/db_xref="GeneID:7884142"
gene 370474..370550
/locus_tag="Tola_R0022"
/note="tRNA-Asp3"
/db_xref="GeneID:7884143"
tRNA 370474..370550
/locus_tag="Tola_R0022"
/product="tRNA-Asp"
/db_xref="GeneID:7884143"
gene 370745..371233
/locus_tag="Tola_0328"
/db_xref="GeneID:7884144"
CDS 370745..371233
/locus_tag="Tola_0328"
/inference="protein motif:PFAM:PF03734"
/note="PFAM: ErfK/YbiS/YcfS/YnhG family protein;
KEGG: aha:AHA_0618 ErfK/YbiS/YcfS/YnhG family protein"
/codon_start=1
/transl_table=11
/product="ErfK/YbiS/YcfS/YnhG family protein"
/protein_id="YP_002891544.1"
/db_xref="GI:237807104"
/db_xref="InterPro:IPR005490"
/db_xref="GeneID:7884144"
/translation="MKFAILISGLLLGFSVNATIMPKADLVVVKKSQYSLTLYSKGVP
LKRYWVALGPNPRGPKIREGDNKTPEGRYLLDYRKMDSNYYKAFHISYPSLNDMKRAQ
HLGVEPGGQILLHGQRKGSVMSDETLQRSNWTNGCIALINADMDELWESVSPGTPIEI
RP"
misc_feature 370820..371224
/locus_tag="Tola_0328"
/note="L,D-transpeptidase catalytic domain; Region: YkuD;
pfam03734"
/db_xref="CDD:202749"
gene 371380..371763
/locus_tag="Tola_0329"
/db_xref="GeneID:7884145"
CDS 371380..371763
/locus_tag="Tola_0329"
/inference="protein motif:PFAM:PF00036"
/note="PFAM: Calcium-binding EF-hand-containing protein;
SMART: Calcium-binding EF-hand-containing protein;
KEGG: reu:Reut_A3217 calcium-binding EF-hand"
/codon_start=1
/transl_table=11
/product="calcium-binding domain-containing protein"
/protein_id="YP_002891545.1"
/db_xref="GI:237807105"
/db_xref="InterPro:IPR002048"
/db_xref="GeneID:7884145"
/translation="MKVMGAALLVTFLCAPVYATEVTQTKSVPVQADNLFTKADKDQD
GKLDQKEFAAFKQLQEERMIRQIKQRMSKMQFSAFDKDGDSEVTQDELKSARIEARQK
MMQQLRERQLQLKPVVSTAVDSAKK"
misc_feature 371485..371664
/locus_tag="Tola_0329"
/note="EF-hand, calcium binding motif; A diverse
superfamily of calcium sensors and calcium signal
modulators; most examples in this alignment model have 2
active canonical EF hands. Ca2+ binding induces a
conformational change in the EF-hand motif, leading to...;
Region: EFh; cd00051"
/db_xref="CDD:28933"
misc_feature 371491..371664
/locus_tag="Tola_0329"
/note="EF-hand domain pair; Region: EF_hand_5; pfam13499"
/db_xref="CDD:205677"
misc_feature order(371497..371499,371503..371505,371509..371511,
371530..371532,371617..371619,371623..371625,
371629..371631,371650..371652)
/locus_tag="Tola_0329"
/note="Ca2+ binding site [ion binding]; other site"
/db_xref="CDD:28933"
gene complement(371800..372810)
/locus_tag="Tola_0330"
/db_xref="GeneID:7884146"
CDS complement(371800..372810)
/locus_tag="Tola_0330"
/EC_number="4.2.1.24"
/inference="protein motif:PRIAM:4.2.1.24"
/note="catalyzes the formation of porphobilinogen from
5-aminolevulinate"
/codon_start=1
/transl_table=11
/product="delta-aminolevulinic acid dehydratase"
/protein_id="YP_002891546.1"
/db_xref="GI:237807106"
/db_xref="InterPro:IPR001731"
/db_xref="GeneID:7884146"
/translation="MPQFVSSPFPLRRLRRVRKHEFSRRLVRENQLSVDDLIYPMFVL
DGESRRETITSMPGIERLSLDLLLQEAEELVRLGIPAIALFPVIPAEQKSLLAEEAYN
DDGLVPCVVRALKERFPELGVITDVALDPYTTHGQDGIIDDHGYVLNDITSDILVRQA
LCHAKAGADIVAPSDMMDGRIAAIRRSLEQHNLVNTQIMAYSAKYASNYYGPFRDAVG
SSANLGKGNKNTYQMDPANSNEALQEVGLDIQEGADMVMVKPGMPYLDIIHRVKHQYG
VPTFAYQVSGEYAMHMAAIQNGWLKERECIMESLLCFKRAGADGILTYFAKQVAYWLQ
NK"
misc_feature complement(371809..372777)
/locus_tag="Tola_0330"
/note="Porphobilinogen synthase (PBGS), which is also
called delta-aminolevulinic acid dehydratase (ALAD),
catalyzes the condensation of two 5-aminolevulinic acid
(ALA) molecules to form the pyrrole porphobilinogen (PBG),
which is the second step in the...; Region:
ALAD_PBGS_aspartate_rich; cd04823"
/db_xref="CDD:88599"
misc_feature complement(order(371866..371868,371875..371877,
371887..371889,371896..371898,371941..371943,
372013..372027,372079..372084,372091..372093,
372100..372111,372118..372123,372184..372192,
372277..372282,372361..372366,372640..372642,
372649..372651,372721..372729,372754..372759,
372766..372774))
/locus_tag="Tola_0330"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88599"
misc_feature complement(order(372067..372069,372079..372081,
372277..372279,372772..372774))
/locus_tag="Tola_0330"
/note="allosteric magnesium binding site [ion binding];
other site"
/db_xref="CDD:88599"
misc_feature complement(order(371839..371841,371956..371958,
371965..371967,372034..372036,372115..372117,
372127..372129,372154..372156,372169..372174,
372181..372183,372199..372201,372289..372291,
372397..372399,372421..372423,372427..372429,
372433..372435))
/locus_tag="Tola_0330"
/note="active site"
/db_xref="CDD:88599"
misc_feature complement(order(372286..372288,372397..372399,
372421..372423))
/locus_tag="Tola_0330"
/note="aspartate-rich active site metal binding site;
other site"
/db_xref="CDD:88599"
misc_feature complement(order(372034..372036,372199..372201))
/locus_tag="Tola_0330"
/note="Schiff base residues; other site"
/db_xref="CDD:88599"
gene complement(372833..374464)
/gene="ubiB"
/locus_tag="Tola_0331"
/db_xref="GeneID:7884147"
CDS complement(372833..374464)
/gene="ubiB"
/locus_tag="Tola_0331"
/inference="protein motif:TFAM:TIGR01982"
/note="an Escherichia coli mutant results in accumulation
of octaprenylphenol and no ubiquinone; functions in the
formation of 2-octaprenyl-6-hydroxy-phenol from
2-octaprenylphenol in ubiquinone (coenzyme Q)
biosynthesis; similar to eukaryotic proteins that exhibit
kinase functions"
/codon_start=1
/transl_table=11
/product="putative ubiquinone biosynthesis protein UbiB"
/protein_id="YP_002891547.1"
/db_xref="GI:237807107"
/db_xref="InterPro:IPR004147"
/db_xref="InterPro:IPR010232"
/db_xref="GeneID:7884147"
/translation="MILREWRRFYTIGSVLLRHGLDELIPRHWQPWPVRLFRRSLFWL
RNRYPEQSRGARLRHAFEGLGPVFIKFGQMLSTRRDLLPPDLAEELAMLQDRVPSFDG
QLAREQIEQALGQPIEALFADFDQQPLASASVAQVHTARLKENNAEIVIKVIRPDIKP
VINDDIRLMRLCAKIVAFLIPNNRLRPVEVIEEYRRTLLDELNLMSEAANAIQLRRNF
ENSSHLYVPLVYSDYCRESVLVMERIYGIPVSDRAALEANGTDLKLLAERGVEVFFTQ
VFRDSFFHADMHPGNVFVSYEHPHDPQWIGIDCGIVGTLNRQDKRYLAENFLAFFNRD
YRKVAELHVQSGWVPPDTKVEEFESALRTVLEPIFAKPLAEISFGQVLLNLFNTARRF
NMHVQPQLVLLQKTLLYIEGLGRHLYPQLDLWQTAKPFLEHWMRQQIGPKAAWRAIKE
KAPFWAEKLPDMPDLIYDTLTQVQHQQHMVKGLYQQYHQQHRRHAQARFLLGAGATLL
LGSILLLPTHEQLASAGLTISIICWLNGWWKISRR"
misc_feature complement(373049..374464)
/gene="ubiB"
/locus_tag="Tola_0331"
/note="Predicted unusual protein kinase [General function
prediction only]; Region: AarF; COG0661"
/db_xref="CDD:31005"
misc_feature complement(372848..374458)
/gene="ubiB"
/locus_tag="Tola_0331"
/note="putative ubiquinone biosynthesis protein UbiB;
Reviewed; Region: ubiB; PRK04750"
/db_xref="CDD:179874"
gene complement(374461..375081)
/locus_tag="Tola_0332"
/db_xref="GeneID:7884148"
CDS complement(374461..375081)
/locus_tag="Tola_0332"
/inference="similar to AA sequence:KEGG:AHA_0085"
/note="KEGG: aha:AHA_0085 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891548.1"
/db_xref="GI:237807108"
/db_xref="GeneID:7884148"
/translation="MTLSPLSVALAALLETGLNQLLSLDPQSRERSKTLYGKVLKLEL
QRLPAIWLIFSPQQVDVLTCYEHPAHASLSLKWQGLQVLRQPEKLSRYIREERIDLQG
DPVLFHAFSHLFSELDIDWEEQLSACTGDVLAHWICRGINRIQQSASVQLLSAKQELR
EAITEEWQLAPGTLQLAAFCDDVSDLERDSERLLQRAEQFFKRSQQ"
misc_feature complement(374473..375069)
/locus_tag="Tola_0332"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3165"
/db_xref="CDD:32978"
misc_feature complement(374737..375030)
/locus_tag="Tola_0332"
/note="SCP-2 sterol transfer family; Region: SCP2;
pfam02036"
/db_xref="CDD:202099"
gene complement(375106..375849)
/locus_tag="Tola_0333"
/db_xref="GeneID:7884149"
CDS complement(375106..375849)
/locus_tag="Tola_0333"
/inference="protein motif:TFAM:TIGR01934"
/note="TIGRFAM: ubiquinone/menaquinone biosynthesis
methyltransferase;
PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type
11; Methyltransferase type 12;
KEGG: asa:ASA_4309 ubiquinone/menaquinone biosynthesis
methyltransferase UbiE"
/codon_start=1
/transl_table=11
/product="ubiquinone/menaquinone biosynthesis
methyltransferase"
/protein_id="YP_002891549.1"
/db_xref="GI:237807109"
/db_xref="InterPro:IPR004033"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:7884149"
/translation="MADNTHFGFKTVAETEKEHLVADVFHSVADKYDLMNDLMSFGIH
RLWKRFTIDCAGVRPGQKILDLAGGTGDLTAKFSRLVGESGEVILADINDSMLKVGRE
KLRNKGLVNNIRYVQANAENLPFPDNYFDLITIGFGLRNVTHKDQALASMYRALKPGG
RLLVLEFSKPTNAVMSKLYDFYSFKVLPKMGQLVAKDSDSYQYLAESIRMHPDQETLK
AMMESVGFEQVTYHNLTQGVVALHRGFKF"
misc_feature complement(375112..375801)
/locus_tag="Tola_0333"
/note="ubiE/COQ5 methyltransferase family; Region:
Ubie_methyltran; pfam01209"
/db_xref="CDD:110227"
misc_feature complement(375358..375666)
/locus_tag="Tola_0333"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(375445..375447,375490..375498,
375574..375579,375634..375654))
/locus_tag="Tola_0333"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(376528..376698)
/locus_tag="Tola_0334"
/db_xref="GeneID:7884150"
CDS complement(376528..376698)
/locus_tag="Tola_0334"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891550.1"
/db_xref="GI:237807110"
/db_xref="GeneID:7884150"
/translation="MSARTLTNHFAHKMAVDYSEARDYTDKNGRNKFGIKLIIKSHAL
TCRTFQAVPCLG"
gene 376739..377398
/locus_tag="Tola_0335"
/db_xref="GeneID:7884151"
CDS 376739..377398
/locus_tag="Tola_0335"
/inference="protein motif:TFAM:TIGR00697"
/note="TIGRFAM: conserved hypothetical protein;
PFAM: protein of unknown function DUF165;
KEGG: asa:ASA_0187 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891551.1"
/db_xref="GI:237807111"
/db_xref="InterPro:IPR003744"
/db_xref="GeneID:7884151"
/translation="MLFTEHQSRQALWRLSLFHILIIASSNYLVQLPIEIAGVHTTWG
AFSFPFIFLATDLTVRIFGSLLARRIILYAMLPALVISYLLSVLFNAGDFLGLAQITQ
FNLFVARIACASFMAYLLGQILDISVFSRLRQLPQWWAAPLASTIIGNLLDTVAFFGI
AFYQSPDPFMAEHWVEIAAVDYAVKLIISIGLFVPAYGVLLRHLTRKLLGQDNANWQT
I"
misc_feature 376739..377365
/locus_tag="Tola_0335"
/note="hypothetical protein; Provisional; Region:
PRK11212"
/db_xref="CDD:183041"
gene 377707..380439
/locus_tag="Tola_0336"
/db_xref="GeneID:7884152"
CDS 377707..380439
/locus_tag="Tola_0336"
/EC_number="2.7.7.7"
/inference="protein motif:TFAM:TIGR00593"
/note="KEGG: aha:AHA_0196 DNA polymerase I;
TIGRFAM: DNA polymerase I;
PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease;
3'-5' exonuclease;
SMART: DNA-directed DNA polymerase; 3'-5' exonuclease;
Helix-hairpin-helix domain protein class 2; 5'-3'
exonuclease"
/codon_start=1
/transl_table=11
/product="DNA polymerase I"
/protein_id="YP_002891552.1"
/db_xref="GI:237807112"
/db_xref="InterPro:IPR001098"
/db_xref="InterPro:IPR002298"
/db_xref="InterPro:IPR002421"
/db_xref="InterPro:IPR002562"
/db_xref="InterPro:IPR008918"
/db_xref="GeneID:7884152"
/translation="MTQTPPLILVDGSSYLYRAFFASQQADLRTSNGEPTGAIRVVTN
MLRSLLKQYPDSVVAVVFDAKGKSFRNDLYAEYKSHRPPMPDDLRSQIEPIHQIIGAM
GLPLLVIDGVEADDVIGTLARQATESQIDTLISTGDKDMAQLVSEHVTLMDTMKDQLT
DRQGVIDKFGVPPELIVDYLALMGDSSDNIPGMAGVGDKTAVAVLQGVGSIDTIAAHP
ERVAELSFRGAKTFAAKFKEQEAMVRLSQQLATIKTDVELPVSLAELRRHELQKDVLL
ALYRQFEFKNLVQELESASEADAEIVTPSDVTAHYDTILTDADLTRWFEKLQQAELFS
FDTETNSLDYIQAQVVGLSFAVAPGDAAYLPLAHDYLGAPEQLDREQTLAKLKPLLED
PTRLKVGQHLKFDRNVLRNHGIHLQGIAFDTMLESYVLNSTASRHNMDDLAKKYLNYT
TQTFEDVAGKGVKQLTFNQVELEKAAFYAAEDADITLRLHQTLWPQVEKEPALKSLLL
EMELPLAEVLSDMERTGALIDPFLLQNQSQQIEVRLAELESQAHEIAGGPFNLGSPKQ
LGEVLFEKLQLPVIKKTPKGAPSTAEEVLQELAYDYPLPKLLLEHRSLSKLKSTYTDK
LPLMIAPSTGRVHTSYHQAVTATGRLSSSDPNLQNIPVRTEEGRRIRQAFVADHGYKI
VAADYSQIELRIMAHLSEDDGLLQAFAHGQDIHRATAAEIMNITPEAVTSEQRRNAKA
INFGLIYGMSAFGLAKQLGIPRGEAQRYMDRYFERYPGVLTYMERTREQAEQAGYVET
LFGRRLYLPDIKAKNMGLRKAAERAAINAPMQGTAADIIKRAMIKLADWIKTCDNGTI
RMVMQVHDELVFEVREDKLDAYVPVIRQYMMDAASLKVPLDVGIGVGDNWDQAH"
misc_feature 377716..380436
/locus_tag="Tola_0336"
/note="DNA polymerase I; Provisional; Region: PRK05755"
/db_xref="CDD:180237"
misc_feature 377725..378231
/locus_tag="Tola_0336"
/note="PIN domain of the 5'-3' exonuclease of Taq DNA
polymerase I and homologs; Region: PIN_53EXO; cd09859"
/db_xref="CDD:189029"
misc_feature order(377737..377739,377893..377895,378043..378045,
378049..378054,378118..378120,378124..378126)
/locus_tag="Tola_0336"
/note="active site"
/db_xref="CDD:189029"
misc_feature order(377737..377739,378049..378051,378118..378120)
/locus_tag="Tola_0336"
/note="metal binding site 1 [ion binding]; metal-binding
site"
/db_xref="CDD:189029"
misc_feature 377911..377949
/locus_tag="Tola_0336"
/note="putative 5' ssDNA interaction site; other site"
/db_xref="CDD:189029"
misc_feature order(378043..378045,378052..378054)
/locus_tag="Tola_0336"
/note="metal binding site 3; metal-binding site"
/db_xref="CDD:189029"
misc_feature order(378118..378120,378124..378126)
/locus_tag="Tola_0336"
/note="metal binding site 2 [ion binding]; metal-binding
site"
/db_xref="CDD:189029"
misc_feature 378223..378462
/locus_tag="Tola_0336"
/note="H3TH domain of the 5'-3' exonuclease of Taq DNA
polymerase I and homologs; Region: H3TH_53EXO; cd09898"
/db_xref="CDD:188618"
misc_feature order(378253..378276,378280..378309,378313..378324)
/locus_tag="Tola_0336"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:188618"
misc_feature order(378259..378261,378268..378270)
/locus_tag="Tola_0336"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:188618"
misc_feature 378682..379209
/locus_tag="Tola_0336"
/note="DEDDy 3'-5' exonuclease domain of Escherichia coli
DNA polymerase I and similar bacterial family-A DNA
polymerases; Region: DNA_polA_I_Ecoli_like_exo; cd06139"
/db_xref="CDD:176651"
misc_feature order(378712..378723,378730..378732,378904..378909,
378913..378921,379018..379023,379066..379071,
379138..379140,379150..379152)
/locus_tag="Tola_0336"
/note="active site"
/db_xref="CDD:176651"
misc_feature order(378712..378714,378718..378720,378919..378921,
379138..379140,379150..379152)
/locus_tag="Tola_0336"
/note="catalytic site [active]"
/db_xref="CDD:176651"
misc_feature order(378715..378723,378730..378732,378904..378909,
378913..378918,379018..379023,379066..379071,
379138..379140,379150..379152)
/locus_tag="Tola_0336"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176651"
misc_feature 379291..380427
/locus_tag="Tola_0336"
/note="Polymerase I functions primarily to fill DNA gaps
that arise during DNA repair, recombination and
replication; Region: DNA_pol_A_pol_I_C; cd08637"
/db_xref="CDD:176474"
misc_feature order(379540..379542,379552..379554,379561..379566,
379639..379647,379651..379653,379657..379668,
379762..379767,379849..379851,379909..379911,
379921..379923,380173..380175,380194..380196,
380290..380298)
/locus_tag="Tola_0336"
/note="active site"
/db_xref="CDD:176474"
misc_feature order(379540..379542,379552..379554,379561..379566,
379639..379647,379651..379653,379657..379668,
379945..379947,380170..380175,380182..380184,
380194..380196,380290..380298)
/locus_tag="Tola_0336"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:176474"
misc_feature order(379762..379767,379771..379773,379849..379851,
379909..379911,379921..379923,380296..380298)
/locus_tag="Tola_0336"
/note="catalytic site [active]"
/db_xref="CDD:176474"
gene complement(380483..381121)
/gene="engB"
/locus_tag="Tola_0337"
/db_xref="GeneID:7884153"
CDS complement(380483..381121)
/gene="engB"
/locus_tag="Tola_0337"
/inference="protein motif:PFAM:PF01926"
/note="binds guanine nucleotides; in Escherichia coli
depletion results in defective cell division and
filamentation; in Bacillus subtilis this gene is
essential"
/codon_start=1
/transl_table=11
/product="ribosome biogenesis GTP-binding protein YsxC"
/protein_id="YP_002891553.1"
/db_xref="GI:237807113"
/db_xref="InterPro:IPR002917"
/db_xref="GeneID:7884153"
/translation="MDTPLLNFRKVHFVTSAPDIRHLPNDGGIEIAFAGRSNAGKSSA
LNALTQQRQLARTSKTPGRTQLINLFELEPGKRLVDLPGYGYAQVPIEMKLKWQAALS
EYLQKRESLKALVLLMDIRHPLKDLDLQMLEWASNSDLNILVLLTKADKLNPGPRKTV
VQQVRKATMVFGDSVRVEAFSSLKGTGVDEVTRILSDWYQPEDTPDEISEAE"
misc_feature complement(380513..381106)
/gene="engB"
/locus_tag="Tola_0337"
/note="Predicted GTPase [General function prediction
only]; Region: COG0218"
/db_xref="CDD:30567"
misc_feature complement(380528..381034)
/gene="engB"
/locus_tag="Tola_0337"
/note="YihA (EngB) GTPase family; Region: YihA_EngB;
cd01876"
/db_xref="CDD:206665"
misc_feature complement(380996..381019)
/gene="engB"
/locus_tag="Tola_0337"
/note="G1 box; other site"
/db_xref="CDD:206665"
misc_feature complement(order(380576..380581,380672..380674,
380678..380680,380882..380884,380930..380938,
380945..380953,380993..381013))
/gene="engB"
/locus_tag="Tola_0337"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206665"
misc_feature complement(380921..380941)
/gene="engB"
/locus_tag="Tola_0337"
/note="Switch I region; other site"
/db_xref="CDD:206665"
misc_feature complement(380930..380932)
/gene="engB"
/locus_tag="Tola_0337"
/note="G2 box; other site"
/db_xref="CDD:206665"
misc_feature complement(380873..380884)
/gene="engB"
/locus_tag="Tola_0337"
/note="G3 box; other site"
/db_xref="CDD:206665"
misc_feature complement(order(380789..380794,380801..380845,
380864..380875))
/gene="engB"
/locus_tag="Tola_0337"
/note="Switch II region; other site"
/db_xref="CDD:206665"
misc_feature complement(380672..380683)
/gene="engB"
/locus_tag="Tola_0337"
/note="G4 box; other site"
/db_xref="CDD:206665"
misc_feature complement(380573..380581)
/gene="engB"
/locus_tag="Tola_0337"
/note="G5 box; other site"
/db_xref="CDD:206665"
gene complement(381278..381523)
/locus_tag="Tola_0338"
/db_xref="GeneID:7884154"
CDS complement(381278..381523)
/locus_tag="Tola_0338"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891554.1"
/db_xref="GI:237807114"
/db_xref="GeneID:7884154"
/translation="MNKTKLLVPLPWLTLDMAGILLVMWGGLEYFGWLHWWPETWHYP
YYELLLMMVGFFMMVPYQVMLLMAVMRKIQEVKKAQQ"
gene 381637..382047
/locus_tag="Tola_0339"
/db_xref="GeneID:7884155"
CDS 381637..382047
/locus_tag="Tola_0339"
/inference="similar to AA sequence:KEGG:AHA_3969"
/note="KEGG: aha:AHA_3969 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891555.1"
/db_xref="GI:237807115"
/db_xref="GeneID:7884155"
/translation="MKKIIVAGALLVMSGVANAGLLDAVAETATAVASSKETGVSADQ
AITALLKTKFQENVTTKAQVKENLGEPKATATDNSLDVWTYDMDSVNNKLSTITGIAK
AFGNDTSKVEKVVELKFDGDVMKSYAVVDAASAG"
gene complement(382373..383041)
/locus_tag="Tola_0340"
/db_xref="GeneID:7884156"
CDS complement(382373..383041)
/locus_tag="Tola_0340"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: abu:Abu_1030 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891556.1"
/db_xref="GI:237807116"
/db_xref="GeneID:7884156"
/translation="MNLSCKANETKNSCYIANIEARLIYFIFYYIKDGDDKAFERAGT
TRHNLIKEKTKKENNTLILSFPIKTSTEFKSAWDKIKNMQKEKLSLIKEGHIFSHASK
GESEDGLEFLASNSEDGTISYDEILSLPRLSWAKNATLTLYGCNSGISGEARDLSIAE
LFSESQKTIVCGQKGYAYFSESDIEYKKISTTSKEVYLWAYKRGQNSVFGNGFKIKPQ
IVRP"
gene complement(383045..385207)
/locus_tag="Tola_0341"
/db_xref="GeneID:7884157"
CDS complement(383045..385207)
/locus_tag="Tola_0341"
/inference="protein motif:TFAM:TIGR03361"
/note="TIGRFAM: type VI secretion system Vgr family
protein; Rhs element Vgr protein;
PFAM: Rhs element Vgr protein;
KEGG: vfm:VFMJ11_A1069 VgrG protein"
/codon_start=1
/transl_table=11
/product="ImpA family type VI secretion-associated
protein"
/protein_id="YP_002891557.1"
/db_xref="GI:237807117"
/db_xref="InterPro:IPR006533"
/db_xref="InterPro:IPR017847"
/db_xref="GeneID:7884157"
/translation="MWFFSANEAQFLFTVDGCHEELGVLRFSGQEALGSDYLFEIDVV
CDSDSLDLLALQHQTACLILQNNPTPRYIHGIVLCAGHIKTDSRHHHYRFHLVPQAKL
LQYRTDQRIFQNKSVTGIIQAVWQQAGLNPAAIRFQTTQQHPPLAYCVQYRETDLNFI
QRLCEFHSLFYYFEHTVNQLTMVFVDGKENCPKTGAVSYQPDSGQNPDKPAISQLDWQ
FQATEGSTEIREYDFTRPSFSLTGKTQTARCEWYEYGTRQDSQHQAGKRAALFLNQQQ
NECQRAYATGNVRNITPGYFLPVTEHPLATLNIDWLVVSIQHSGEQPQVLKELASGSS
KYQNNLVLHHKDIPFSLPRIHAKPQISGYQTALVTGPDGQEICTDEYGRIKVQFHWDK
DATGDANSSCWLRVAQGWAGAAYGQHFLPRVGQEVIVAFLEHDIDRPYVTGYVYNAAN
TSPVKYPVNHSQSGIRTLSSPGGGGFNELRFEDKKGKEQIVLHAQRNWYRKVKRTSRT
EIGGNEHRWIGGKDVQHTSGEAHLTINKNRLTDISGNQDLHVLQNQHLHIDHKWLTKI
DQELHVKAGQTMVLEAATAMSFDAGGSTLLLDDAGIKLQGASIRINSGGAIAPTLYPI
LQKITLPVILSSIQLPAIKKITPLSKIYNSKQEPSIIYDEQVKLIEKNSGEPLKNVPY
KLIRKSNNDLLAHGHTDEGGLTERVFCKNPDDIKILIG"
misc_feature complement(383663..385177)
/locus_tag="Tola_0341"
/note="type VI secretion system Vgr family protein;
Region: VI_Rhs_Vgr; TIGR03361"
/db_xref="CDD:200267"
misc_feature complement(384236..385120)
/locus_tag="Tola_0341"
/note="Phage late control gene D protein (GPD); Region:
Phage_GPD; pfam05954"
/db_xref="CDD:203357"
misc_feature complement(383846..384124)
/locus_tag="Tola_0341"
/note="Phage-related baseplate assembly protein; Region:
Phage_base_V; pfam04717"
/db_xref="CDD:203075"
gene complement(385297..385815)
/locus_tag="Tola_0342"
/db_xref="GeneID:7884158"
CDS complement(385297..385815)
/locus_tag="Tola_0342"
/inference="protein motif:TFAM:TIGR03344"
/note="TIGRFAM: type VI secretion system effector, Hcp1
family;
PFAM: protein of unknown function DUF796;
KEGG: vfm:VFMJ11_A1070 hemolysin co-regulated protein"
/codon_start=1
/transl_table=11
/product="type VI secretion system effector"
/protein_id="YP_002891558.1"
/db_xref="GI:237807118"
/db_xref="InterPro:IPR008514"
/db_xref="InterPro:IPR017728"
/db_xref="GeneID:7884158"
/translation="MPTPAYMTINGEKQGLITAGTFTEASVGNIYQEGHEDEVMVQGF
EHQVVLPRDPQSGQPSGQRVHKPVKITKVFDKCSPLIYNSLTSGERLPSVKIKWYRTS
AAGTQEHYFTTELTDAIVVDVQASMPNCQDPSQAHFTHLEDVFMTYRAIKWTHEVSGT
SGSDDWRSPTTA"
misc_feature complement(385309..385812)
/locus_tag="Tola_0342"
/note="type VI secretion system effector, Hcp1 family;
Region: VI_effect_Hcp1; TIGR03344"
/db_xref="CDD:211810"
gene complement(386123..386707)
/locus_tag="Tola_0343"
/db_xref="GeneID:7884159"
CDS complement(386123..386707)
/locus_tag="Tola_0343"
/inference="protein motif:PFAM:PF01292"
/note="PFAM: cytochrome B561;
KEGG: shw:Sputw3181_0211 cytochrome b561"
/codon_start=1
/transl_table=11
/product="cytochrome B561"
/protein_id="YP_002891559.1"
/db_xref="GI:237807119"
/db_xref="InterPro:IPR011577"
/db_xref="GeneID:7884159"
/translation="MGLSSEKVKIWDPFIRIFHWTVVTLFFCNYLLSDKGMPFERGGT
LHIYAGYIVIGFVLARLIWGVIGSHHARFKNFIPKPAEFMAYMRAMLRGEHTNYEGHN
PAGAVMILCLLSGLLLTGLTGWLASLADVFDGWQAGIAAATDFIDWGEMHEFFANLTM
LGAGIHITAVLIISHLMGENLVHAMLSGYKKKSG"
misc_feature complement(386126..386698)
/locus_tag="Tola_0343"
/note="Cytochrome b (N-terminus)/b6/petB: Cytochrome b is
a subunit of cytochrome bc1, an 11-subunit mitochondrial
respiratory enzyme. Cytochrome b spans the mitochondrial
membrane with 8 transmembrane helices (A-H) in eukaryotes.
In plants and cyanobacteria; Region: Cytochrome_b_N;
cl00859"
/db_xref="CDD:207221"
gene complement(386908..388164)
/locus_tag="Tola_0344"
/db_xref="GeneID:7884160"
CDS complement(386908..388164)
/locus_tag="Tola_0344"
/inference="protein motif:PFAM:PF00375"
/note="involved in the import of serine and threonine
coupled with the import of sodium"
/codon_start=1
/transl_table=11
/product="serine/threonine transporter SstT"
/protein_id="YP_002891560.1"
/db_xref="GI:237807120"
/db_xref="InterPro:IPR001991"
/db_xref="GeneID:7884160"
/translation="MSQTPPSFIRLLNNTSLVSQILIGMIVGILLATLIPSAAQSAGL
LGTLFVGALKAVAPVLVLLLVTDSIAGHKQGQKTSIRPLLILYLFGTFCAAVVAVVAS
FAFPSVLHLSAQNADIVPPGGIAEVLNTLLFNVVANPVKALLEGNYIGILAWAIALGL
SLRKASDTTKAVIHDLSHAVSGIVKGVIRCAPLGIMGLVASTFAETGFSALLSYAQLL
IVLIGCMLFVAFVVNPLIVFWKIKRNPYPLVLMCLKESGVTAFFTRSSAANIPVNMAL
CEKLRLPEETYAVSIPLGATINMAGAAITITVLSMAAVNTLGISVDLATAVLLSVVAT
ISACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVLQDSAETALNSSTDV
LFTAAACMAEDGSLSEGNLQEDADIV"
misc_feature complement(386956..388161)
/locus_tag="Tola_0344"
/note="serine/threonine transporter SstT; Provisional;
Region: PRK13628"
/db_xref="CDD:184190"
misc_feature complement(386977..388119)
/locus_tag="Tola_0344"
/note="Na+/H+-dicarboxylate symporters [Energy production
and conversion]; Region: GltP; COG1301"
/db_xref="CDD:31492"
gene complement(388410..388679)
/locus_tag="Tola_0345"
/db_xref="GeneID:7884161"
CDS complement(388410..388679)
/locus_tag="Tola_0345"
/inference="protein motif:PFAM:PF02583"
/note="PFAM: protein of unknown function DUF156;
KEGG: rpi:Rpic_2938 protein of unknown function DUF156"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891561.1"
/db_xref="GI:237807121"
/db_xref="InterPro:IPR003735"
/db_xref="GeneID:7884161"
/translation="MSHTLKHKKPLLNRVRRLKGQLEALERALDEETGCYPILQQITA
IRGAINGLMATVIEGHIREHMQPLLEQDEPQATEELIKVLRSYLK"
misc_feature complement(388416..388673)
/locus_tag="Tola_0345"
/note="Transcriptional regulators RcnR and FrmR, and
related domains; this domain family was previously known
as part of DUF156; Region: RcnR-FrmR-like_DUF156; cd10153"
/db_xref="CDD:197388"
misc_feature complement(order(388488..388490,388500..388502,
388575..388577,388671..388673))
/locus_tag="Tola_0345"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:197388"
misc_feature complement(order(388425..388454,388458..388463,
388485..388487,388494..388502,388506..388514,
388518..388523,388530..388535,388542..388547,
388551..388556,388560..388568,388572..388580,
388584..388595,388602..388607,388611..388616,
388623..388625,388632..388637,388644..388649,
388656..388658))
/locus_tag="Tola_0345"
/note="putative homotetramer interface [polypeptide
binding]; other site"
/db_xref="CDD:197388"
misc_feature complement(order(388425..388436,388443..388445,
388500..388502,388512..388514,388521..388523,
388530..388535,388542..388547,388551..388556,
388560..388568,388572..388580,388584..388595,
388602..388607,388611..388616,388623..388625,
388632..388637,388644..388649,388656..388658))
/locus_tag="Tola_0345"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:197388"
misc_feature complement(order(388437..388442,388446..388454,
388458..388463,388485..388490,388494..388499,
388506..388511,388518..388520))
/locus_tag="Tola_0345"
/note="putative homodimer-homodimer interface [polypeptide
binding]; other site"
/db_xref="CDD:197388"
misc_feature complement(order(388443..388445,388500..388502))
/locus_tag="Tola_0345"
/note="putative allosteric switch controlling residues;
other site"
/db_xref="CDD:197388"
gene 388779..389771
/locus_tag="Tola_0346"
/db_xref="GeneID:7884162"
CDS 388779..389771
/locus_tag="Tola_0346"
/inference="protein motif:TFAM:TIGR01297"
/note="TIGRFAM: cation diffusion facilitator family
transporter;
PFAM: cation efflux protein;
KEGG: aha:AHA_0626 heavy metal transporter"
/codon_start=1
/transl_table=11
/product="cation diffusion facilitator family transporter"
/protein_id="YP_002891562.1"
/db_xref="GI:237807122"
/db_xref="InterPro:IPR002524"
/db_xref="GeneID:7884162"
/translation="MSSVREMMQCCQAAAFQRPVQGAEQRIRWVVILTVIMMVVEIFA
GWLFHSMALLADGWHMSTHALALGISLLAYALSRRWAGDHRLAFGTWKIEVLGAYTSA
LILAAVAFSMIAESVSRLSNPGEINYVESMLVAVLGLAVNLFSAWLLGDQHHHGLGHH
HSDDHHADDHDHDHDHDHDHDHDHDHDHSHDHGHHDLNKKAAYIHVLTDAATSVLAIF
ALAGGLLWGAAWLDPLMGIVGGVVILVWAWGLLKESTLILIDADNQNSMRAAILETAI
GHDLQISDLHVWRIGEQRYAAIIGLASSQPESISELRGALSQLDKLAHITIEQV"
misc_feature 388845..389762
/locus_tag="Tola_0346"
/note="Co/Zn/Cd efflux system component [Inorganic ion
transport and metabolism]; Region: CzcD; COG1230"
/db_xref="CDD:31423"
misc_feature 388884..389672
/locus_tag="Tola_0346"
/note="Cation efflux family; Region: Cation_efflux;
pfam01545"
/db_xref="CDD:201849"
gene complement(389826..391811)
/locus_tag="Tola_0347"
/db_xref="GeneID:7884163"
CDS complement(389826..391811)
/locus_tag="Tola_0347"
/inference="protein motif:PFAM:PF01435"
/note="PFAM: peptidase M48 Ste24p;
KEGG: cja:CJA_0922 Zn-dependent protease with chaperone
function"
/codon_start=1
/transl_table=11
/product="peptidase M48 Ste24p"
/protein_id="YP_002891563.1"
/db_xref="GI:237807123"
/db_xref="InterPro:IPR001915"
/db_xref="GeneID:7884163"
/translation="MDFYQYQDQAKKISARLLFLFFAGLISLSAALTFAGLLLWKLTD
QVVYINTDSQFWHWYIVGNIAIFAALVLITLLKYSSLCKGGRVVAEALGGRYVHVNTQ
DPGDTRLRNVVEEMALASGTPVPSVYVLDNEPGINAFAAGMSVNDAVIVVTQGAISYL
SRDELQAVVAHEFSHILHGDIRLNQQLAALIGSLMFLGELGRWLSQGSGRHRHRINTS
QGKSSSALPFFGLTLMLLGAAGTVWGRLMKSALNRQREFLADAAAVQFTRYPAPLASA
LKKVGGHRYASLIFHPQAETFSHLFFSQGLTQNFRGWLASHPPLQERIRRLDPAWDGK
YYANLQPMADEVPPPLPASFVSAVQLKATGNQDLAAMLLAQSALATTPVEMPKRPKPE
QTGLPLTTGSEPVLYDTTAPGEWLPQLPEPLVRAARSPFDARLLLYRLVLASDLTIRL
KQRHLLGQEESAVLALTQYPVPCGLQLALVELAIPALKELTAEQYQQFHDMLWQLIQA
DQQVSLPEWLLYRMLVHQLRPHFSAEARQNINYREINELSSAITVWLSYLTHLSTHDT
PAEQIFAAYAAPLAMTELSLQPMPSLDTLSAALDQLQQSSPAIRFKLLQTIIDAIEQD
GKITEQEAGVFQMLAYCLDCPLPPPQVWSQNNSPKTG"
misc_feature complement(390831..391805)
/locus_tag="Tola_0347"
/note="Peptidase family M48; Region: Peptidase_M48;
cl12018"
/db_xref="CDD:209416"
gene complement(391824..392420)
/locus_tag="Tola_0348"
/db_xref="GeneID:7884164"
CDS complement(391824..392420)
/locus_tag="Tola_0348"
/inference="protein motif:PFAM:PF04011"
/note="PFAM: LemA family protein;
KEGG: cja:CJA_0923 hypothetical protein"
/codon_start=1
/transl_table=11
/product="LemA family protein"
/protein_id="YP_002891564.1"
/db_xref="GI:237807124"
/db_xref="InterPro:IPR007156"
/db_xref="GeneID:7884164"
/translation="MMIGLLVVLGVLLLAVFWLVSIYNQLVALKGRYQNAFAQIEVQL
KRRYDLIPNLVETAKGYLQHESKTLTAVTEARNAALAGLKAATAAPGNPAAMQQLAAA
EHQLHGALQGLNIQIEAYPDLKANENMLQLSEELTATENRVAFARQGFNDCVTAYNIY
RQQFPNSLIANRFGHTSDASLLEIENPEEYRQTPKVSF"
misc_feature complement(391833..392357)
/locus_tag="Tola_0348"
/note="Uncharacterized conserved protein [Function
unknown]; Region: LemA; COG1704"
/db_xref="CDD:31890"
gene complement(392583..394772)
/locus_tag="Tola_0349"
/db_xref="GeneID:7884165"
CDS complement(392583..394772)
/locus_tag="Tola_0349"
/inference="protein motif:TFAM:TIGR01075"
/note="TIGRFAM: DNA helicase II;
PFAM: UvrD/REP helicase;
KEGG: aha:AHA_0220 DNA helicase II"
/codon_start=1
/transl_table=11
/product="DNA helicase II"
/protein_id="YP_002891565.1"
/db_xref="GI:237807125"
/db_xref="InterPro:IPR000212"
/db_xref="InterPro:IPR005753"
/db_xref="InterPro:IPR014016"
/db_xref="InterPro:IPR014017"
/db_xref="GeneID:7884165"
/translation="MDISHLLDGLNDKQRDVVAAPLQNMLVLAGAGSGKTRVLVHRIA
WLLQIEQVSPHSILAVTFTNKAAAEMRGRIERLLGNSLGFGRGGMWIGTFHGLAHRLL
RAHPLDANLPEDFQIIDSDDQLRLLKRILRNLNLDEKQWVPRAVAGYINSKKDEGLRP
HHIDVYDPVGRTYQKIYATYQETCDRAGLVDFAELLLRAHELWLHKPHLLEHYQQRFR
HILVDEFQDTNGIQYAWIRMLAGDSSKVMIVGDDDQSIYGWRGARVENIQRFMQDFDD
VQTIRLEQNYRSTSTILKAANQLIANNSARLGKELWTDGVAGESISVYAAFNEIDEAR
FVVSRLKAWREQGNSLLDAAILYRNNAQSRILEEALMQEQLPYRIYGGLRFFERQEIK
DAIAYLRLLSNHSDDASFERVVNTPTRGIGDRTLGLIREAARDRSLNLWQSAWQLCEQ
GVLAGRAANAVRNFLALINQLETDTSELPLHVQVDRVIRQSGLWTHYENEKGEKGQSR
IENLEELVNATRLFRPAEEYLDMSPLTAFLAHATLESGDKQADEFDEAVQLMTLHSAK
GLEFPLVFMVGVEEGMFPSQQSSEEPGRLEEERRLCYVGMTRAMQKLYLTHAESRRLY
GKESYNRPSRFLKELPSDCLEEIRLRTQVGWSNSAQSQSRFSQEKLQDSFASTGFKLG
QRVLHPTFGEGVVLNYEGVGAQSRVQVNFATAGSKWLVVAYARLEAI"
misc_feature complement(392586..394772)
/locus_tag="Tola_0349"
/note="DNA-dependent helicase II; Provisional; Region:
uvrD; PRK11773"
/db_xref="CDD:183307"
misc_feature complement(394479..394700)
/locus_tag="Tola_0349"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:205425"
misc_feature complement(392925..>393095)
/locus_tag="Tola_0349"
/note="Family description; Region: UvrD_C_2; cl15862"
/db_xref="CDD:210262"
gene complement(394916..396784)
/gene="trkD"
/locus_tag="Tola_0350"
/db_xref="GeneID:7884166"
CDS complement(394916..396784)
/gene="trkD"
/locus_tag="Tola_0350"
/inference="protein motif:TFAM:TIGR00794"
/note="Responsible for the low-affinity transport of
potassium into the cell; involved in potassium ion uptake
under hyper-osmotic stress at a low pH"
/codon_start=1
/transl_table=11
/product="potassium transport protein Kup"
/protein_id="YP_002891566.1"
/db_xref="GI:237807126"
/db_xref="InterPro:IPR003855"
/db_xref="GeneID:7884166"
/translation="MDAHQKQSLPAVTLAAIGVVYGDIGTSPLYTFKECFSPHIGLPP
TQQVVYGFLSLIFWALILVVSVKYLAFVLRADNRGEGGILTLMSLAGRNTYAGTTTVL
LVLGLIGGGFFYGEVVITPAMSVLSALEGLSVATPALTPYILPVAIAVLTALFVIQKH
GTGSVGKLFGPVMLLWFFSLGTLGAISIFKNPQVLAALNPHWAIQFFLTYKTVAFFSL
GSVVLAITGVEALYADMGHFGKFPIQLAWFTVALPALLLNYFGQGALILSNPEAIANP
FFMLAPEWLVFPMVILSTMATVIASQAVISGVFSLTRQAVRLGYLPGMNILHTSEVEA
GQIYIPFVNWMLYIAVLIVVVTFRESTNLAAAYGIAVTGTMVITTILACTVAHYNWDW
PRRVVKIILISLLLIDVPLFLANVVKFFAGGWLPVMLGAIMFMVMATWKWERFLLLRQ
LSRMSMPLESFVAMVEKETPQKVPGTAIYLSRTQQGIPHALLHNLNHNHVLHERIVLM
TFRTQDVPYVDPDQHIEIKSLSPNVWRISATYGFHETPDVYEVFRRCAMKGMAFNLNT
TSFFLSRETLLPSHRSILARLRAALFIWLSKNSLRTNDFIHVPADRVVEMGVQVEV"
misc_feature complement(394919..396784)
/gene="trkD"
/locus_tag="Tola_0350"
/note="potassium transport protein Kup; Provisional;
Region: trkD; PRK10745"
/db_xref="CDD:182693"
gene complement(396802..397494)
/locus_tag="Tola_0351"
/db_xref="GeneID:7884167"
CDS complement(396802..397494)
/locus_tag="Tola_0351"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891567.1"
/db_xref="GI:237807127"
/db_xref="GeneID:7884167"
/translation="MNKIRKLLFSSGLLLLPSLAYAVPVTEFVDTLFIGGGVMLFIAG
VLLLLVPGLFKTGVFITLLADILFMFRMLFPDVLEQDLAAQSDWQPLIESASTGSSRF
YAAIGVALIVITTLSLRWLLHSFLAAPSAAPKSSSRTSLTARKKTVSQNHPSRQKPSG
RTKSRLNRDRDDFSGYTEEPPAPQAEPVSPVHNKRFRVHDYLENLEQQQAQPAPSPQE
TEPAIHFDRIER"
gene complement(397764..399155)
/locus_tag="Tola_0352"
/db_xref="GeneID:7884168"
CDS complement(397764..399155)
/locus_tag="Tola_0352"
/inference="protein motif:TFAM:TIGR01845"
/note="TIGRFAM: RND efflux system, outer membrane
lipoprotein, NodT family;
PFAM: outer membrane efflux protein;
KEGG: aha:AHA_2909 outer membrane protein OprM"
/codon_start=1
/transl_table=11
/product="NodT family RND efflux system outer membrane
lipoprotein"
/protein_id="YP_002891568.1"
/db_xref="GI:237807128"
/db_xref="InterPro:IPR003423"
/db_xref="InterPro:IPR010131"
/db_xref="GeneID:7884168"
/translation="MIKRPIAFLVSLLLAGCSLAPDYQRPAAPIPAGYDTSSASTIAA
VKATDWQQAFTDPALQKLIDTALQNNRDLRIAILNVEAYQAQYRIQRAAQLPTLTASG
YQARQRIPSTYSGTADAISNTDSATVGISAYELDLFGRVQSLKDQALENYLAQEETQR
STQLSLIANVATAYMTLLADQDLLRLAEQTAKSYEQSYQLIEQRYQAGISSSLDVSQS
RSNLESVRSSLAQYRRQVTLDKNALRLLMGTNIPAGLSSGLPEQDLTLLSPLGADIPS
TLLTRRPDILAAEHSLKAANANIGAARAAFFPTISLTANAGSMSSSLNKLFDAGSGTW
LFQPNISLPIFDWGSRDAQLDVAKVQEKIEVATYEKAIQTAFQEVSDGLAAQDGYRDQ
LQAQQALVDANRTYYQLAQSRYEKGVDSYLTLLDAQRSLFSAEQGLVSTRLALLSNRV
SLFKALGGGWQQK"
misc_feature complement(397779..399116)
/locus_tag="Tola_0352"
/note="efflux transporter, outer membrane factor (OMF)
lipoprotein, NodT family; Region: outer_NodT; TIGR01845"
/db_xref="CDD:162557"
gene complement(399148..402294)
/locus_tag="Tola_0353"
/db_xref="GeneID:7884169"
CDS complement(399148..402294)
/locus_tag="Tola_0353"
/inference="protein motif:TFAM:TIGR00915"
/note="TIGRFAM: transporter, hydrophobe/amphiphile
efflux-1 (HAE1) family;
PFAM: acriflavin resistance protein;
KEGG: aha:AHA_2910 AcrB protein"
/codon_start=1
/transl_table=11
/product="hydrophobe/amphiphile efflux-1 (HAE1) family
transporter"
/protein_id="YP_002891569.1"
/db_xref="GI:237807129"
/db_xref="InterPro:IPR001036"
/db_xref="InterPro:IPR004764"
/db_xref="GeneID:7884169"
/translation="MSRFFIDRPIFAWVIAIVIMLAGALAIKSLPIEQYPTIAPPSVR
ISTSYPGASAQTVEDSVTQVLEQNMTGIDNLLYMSSQSDSSGNVTVSLSFLAGTNADT
AQVQVQNKVQQALSSLPQTVQDQGVRVEKSTESFLMVAGLISENGEMDQSDISDYMVT
NIKEPLSRIKGVGTVQIFGSQYAMRVWLDPNKLNSFNLTPGDVTSAITSQNTQISVGQ
LGATPAVAGQQFNATITGQGRLTSMDEFKNILLKVNTNGSQVRLRDVARVELGAESYN
AVSRYNGKPASGIAIRLASNANALDTAELVKAKMADLSKYFPTGLKVVYPFDTTTFVK
ISISEVAQTLVEAVILVFFIMYLFLQNFRATLIPTIAVPVVLLGTFGIMSVFGYTINT
LTMFGLVLAIGLLVDDAIVVVENVERVMSEEGLSPLEATRKSMDQITGALIGIALVLS
AVFVPMAFFSGSTGAIYRQFSLTIVSAMALSVVVALILTPALCATMLKPVPKGDHGIQ
TGFFGWFNHMFERNSRRYRNTVGRILQRSGRMLVIYVVLLLGLVWLFTRMPTSFLPEE
DQGIALTMVQLPTGATQERTLKVLDKVSDHFTTAEKKNVESVFTVAGFSFAGSGQNMG
LAFVKLKDWSERKASDDAASAIIGRAMGAFSQIKDASIFAFNMSSIPALGNSSGFDLY
LQDRGGLGHEKLIEARNQLLGMAAKEPSLTRVRPNGMEDTPQYNINIDYEKAMALGLT
VSDINSTLSTAWGSNYVNDFIDRGRVKKVYVQADAPFRMQPEHLQLWYVRNAQEQMVP
FSAFAEGNWSYGSPRLERYNGSSAIDIVGEAAEGYTTGEAMATMTRLISQLPEGIGFE
WTGLSYQEQESGSQAPALYAISLLVVFLCLAALYESWTIPFSVMLIVPLGVVGALAAA
TLRGLSNDIFFQVGLLTTIGLAAKNAILIVEFAKELFDKGMGIKQAVIEASRMRLRPI
LMTSLAFILGVFPLVISSGAGASGRHAIGTGVTGGMIAATVLAIFYVPSFFVLVMKYF
SKHRHSLRAPTSAEKHHD"
misc_feature complement(399202..402294)
/locus_tag="Tola_0353"
/note="The (Largely Gram-negative Bacterial)
Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Region:
2A0602; TIGR00915"
/db_xref="CDD:162104"
misc_feature complement(<400984..>401265)
/locus_tag="Tola_0353"
/note="Protein export membrane protein; Region: SecD_SecF;
cl14618"
/db_xref="CDD:199094"
gene complement(402312..403502)
/locus_tag="Tola_0354"
/db_xref="GeneID:7884170"
CDS complement(402312..403502)
/locus_tag="Tola_0354"
/inference="protein motif:TFAM:TIGR01730"
/note="TIGRFAM: efflux transporter, RND family, MFP
subunit;
PFAM: secretion protein HlyD family protein;
KEGG: gme:Gmet_0809 secretion protein HlyD"
/codon_start=1
/transl_table=11
/product="RND family efflux transporter MFP subunit"
/protein_id="YP_002891570.1"
/db_xref="GI:237807130"
/db_xref="InterPro:IPR006143"
/db_xref="GeneID:7884170"
/translation="MLHHSCSFRVTILALLTTTLLLTGCNPSAENNQTAMATQAPEVN
VIALQPRALTLHTELPGRTSAYRVAEVRPQVGGIVIKRLFREGSDVKAGQTLYQIDPA
TYEASLASAKASWERAKASEAIARLKAERYRDLSKTNGVSRQENDDAEASWKQAVADV
ASAKAALDTARINLEYTKVKAPISGRIGKSTVTEGALVTAQQTTALTTVQQLDPLYVD
VSQSSNELLKLKKALAEGQLEKAGPQEAKVKLLLEDGSYYTESGKLQFSDVTVDEGTG
SVTVRAIFANSELQLLPGMFVRAELTEATLKDALLVPQLAVSHDPRGKATVLVVNAQD
QVEQKAFETARSIENNWLVKDGLSAGDRIIVNGAQKVKAGMKVSAKNVDVASLTVASP
ATKQ"
misc_feature complement(402354..403427)
/locus_tag="Tola_0354"
/note="multidrug efflux system protein MdtE; Provisional;
Region: PRK09859"
/db_xref="CDD:137559"
misc_feature complement(403164..403304)
/locus_tag="Tola_0354"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature complement(402621..402971)
/locus_tag="Tola_0354"
/note="Biotinyl_lipoyl_domains are present in
biotin-dependent carboxylases/decarboxylases, the
dihydrolipoyl acyltransferase component (E2) of 2-oxo acid
dehydrogenases, and the H-protein of the glycine cleavage
system (GCS). These domains transport CO2, acyl; Region:
Biotinyl_lipoyl_domains; cl11404"
/db_xref="CDD:213122"
gene 403716..404324
/locus_tag="Tola_0355"
/db_xref="GeneID:7884171"
CDS 403716..404324
/locus_tag="Tola_0355"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: regulatory protein TetR;
KEGG: azo:azo0243 TetR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_002891571.1"
/db_xref="GI:237807131"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:7884171"
/translation="MSEMTVTSPESDRAAQRRNQVLDAAAVCFRNHGFHGASMAQISK
TAGMSPGHIYHYFDNKEAIISAIVERDMEEMMEWTEIFYSSDDILQSMLDGVTCGVEA
NTNPDCAALMLEIMAESARNPQIAATVQKSNQIGRQRLSDLLIKEMAQRCAVSTVDVQ
VKTDLIAAMFDGLLMKSVHNPTMDKEALTVLMRQVMLFVLTL"
misc_feature 403728..404321
/locus_tag="Tola_0355"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature 403776..403916
/locus_tag="Tola_0355"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
misc_feature 404025..404300
/locus_tag="Tola_0355"
/note="Bacterial transcriptional repressor; Region:
TetR_C_6; pfam13977"
/db_xref="CDD:206147"
gene complement(404299..407595)
/locus_tag="Tola_0356"
/db_xref="GeneID:7884172"
CDS complement(404299..407595)
/locus_tag="Tola_0356"
/inference="protein motif:TFAM:TIGR00254"
/note="KEGG: lch:Lcho_3018 diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s);
TIGRFAM: diguanylate cyclase; PAS sensor protein;
PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF
domain containing protein; GAF domain protein; PAS fold
domain protein; PAS fold-4 domain protein;
SMART: EAL domain protein; GGDEF domain containing
protein; PAC repeat-containing protein; PAS domain
containing protein"
/codon_start=1
/transl_table=11
/product="PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase"
/protein_id="YP_002891572.1"
/db_xref="GI:237807132"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR000700"
/db_xref="InterPro:IPR001610"
/db_xref="InterPro:IPR001633"
/db_xref="InterPro:IPR003018"
/db_xref="InterPro:IPR013655"
/db_xref="InterPro:IPR013656"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:7884172"
/translation="MNSATAQIPLRTATRIMLFYTVLSVAWFYFSGYSLSPSATKGAP
PFDSLTFWVSLTTFITGITVGVFFLLVWRQHYMQHRQALSRRVAEKDRLLHHFFDLPL
LGMAITTNANGSWLRFNDHLSTLFNLSRDELAELNLLALTHPDDRPYDRQEWMRMQDG
ESQGYRREKRFVRPDGSMLFALVDTRCIRHPDGSIDCMINVIEDISARKNSELRLIRQ
NNLYDMLSLTNQAIVRSQDRLVLLQNICRIAVRNGGFVFAWVSATEQEHSSHVASYGH
DNGFLQFIRDYQQQHRLSAGSHAPVLMPTDRAIAAESHVILNHFLTDESVQPFHEAAT
RAGFQSAGYFVIREKGQVIGALNLYADEPDFFSPEVRATLNDMVMDVTYALDMLLQAK
ERANALIALQNAAEVIDASPTILFRWQPNSSWKMEYVSSNVQRWGYQADDFINGKLTM
SDLLHPEDLQRVWAEVIHHIETRHKEYILECRVRTAAGEYLWVENHVTTSFDRKGKPQ
RFTGVMTDITQQKNNELQLRQAAIVFESTREGIVITDAERNIIKVNRALIDLFGYPEN
ELLGQRPRIFHSGKHDGHFYQQMLQALDEHGFWRGEMWNRRQNGELLPMMTSINPVCD
SNGEILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNS
TRVALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLL
QNNPSPDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQAD
TAMYRAKHDGRDGYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQ
IIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPP
INLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQGL
RQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGH
SLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQQNPPVTQAHI
GKLRESAQIA"
misc_feature complement(406975..407277)
/locus_tag="Tola_0356"
/note="PAS domain; Region: PAS_9; pfam13426"
/db_xref="CDD:205604"
misc_feature complement(406981..407277)
/locus_tag="Tola_0356"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature complement(order(407068..407070,407083..407085,
407164..407175,407212..407214,407230..407232,
407242..407244))
/locus_tag="Tola_0356"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature complement(order(407041..407043,407047..407049,
407134..407139,407146..407148,407170..407172,
407182..407184))
/locus_tag="Tola_0356"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature complement(406438..406893)
/locus_tag="Tola_0356"
/note="GAF domain; Region: GAF_2; pfam13185"
/db_xref="CDD:205366"
misc_feature complement(406045..406365)
/locus_tag="Tola_0356"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature complement(406054..406314)
/locus_tag="Tola_0356"
/note="PAS fold; Region: PAS_3; pfam08447"
/db_xref="CDD:203948"
misc_feature complement(order(406132..406134,406147..406149,
406228..406239,406282..406284,406297..406299,
406309..406311))
/locus_tag="Tola_0356"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature complement(order(406105..406107,406111..406113,
406195..406200,406210..406212,406234..406236,
406252..406254))
/locus_tag="Tola_0356"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature complement(405679..405987)
/locus_tag="Tola_0356"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature complement(405673..405975)
/locus_tag="Tola_0356"
/note="PAS domain; Region: PAS_9; pfam13426"
/db_xref="CDD:205604"
misc_feature complement(order(405766..405768,405781..405783,
405859..405870,405907..405909,405925..405927,
405937..405939))
/locus_tag="Tola_0356"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature complement(order(405739..405741,405745..405747,
405829..405834,405841..405843,405865..405867,
405877..405879))
/locus_tag="Tola_0356"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature complement(405157..405636)
/locus_tag="Tola_0356"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(405394..405396,405523..405525))
/locus_tag="Tola_0356"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(405391..405402,405406..405408,
405472..405474,405484..405486,405496..405501,
405508..405510))
/locus_tag="Tola_0356"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(405331..405333,405418..405420))
/locus_tag="Tola_0356"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature complement(404383..405105)
/locus_tag="Tola_0356"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene complement(407724..408497)
/locus_tag="Tola_0357"
/db_xref="GeneID:7884173"
CDS complement(407724..408497)
/locus_tag="Tola_0357"
/inference="protein motif:PFAM:PF01203"
/note="PFAM: type II secretion system protein N;
KEGG: aha:AHA_0579 type II secretion system protein N"
/codon_start=1
/transl_table=11
/product="type II secretion system protein N"
/protein_id="YP_002891573.1"
/db_xref="GI:237807133"
/db_xref="InterPro:IPR000645"
/db_xref="GeneID:7884173"
/translation="MTIKNLSPRLTLLLLFLFCYLLFLLATFPAAQLLPRLPLPAGMQ
LHNIRGTVWQGQIGELRWQKRALHDVQWEVLFSRLWLGMPTVKLSLQDPEIAIASATV
GWRGDWKINDLTLKTPASVLQQQIPYPLPAEASGTLQLNISHLSFNNKQCLALEGQAE
WLQAQLLTPAGELVLGNPQAELSCRNNELEINIRQDSAALRSQAQLQLNMQGLYKLQA
TLYPGNELPADLRTSLNWLGTSDSEGAIRIKNEGRWNGY"
misc_feature complement(407736..408374)
/locus_tag="Tola_0357"
/note="Type II secretion system (T2SS), protein N; Region:
T2SN; pfam01203"
/db_xref="CDD:189887"
gene complement(408502..408981)
/locus_tag="Tola_0358"
/db_xref="GeneID:7884174"
CDS complement(408502..408981)
/locus_tag="Tola_0358"
/inference="protein motif:PFAM:PF04612"
/note="PFAM: General secretion pathway M protein;
KEGG: cps:CPS_4582 general secretion pathway protein M"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein M"
/protein_id="YP_002891574.1"
/db_xref="GI:237807134"
/db_xref="InterPro:IPR007690"
/db_xref="GeneID:7884174"
/translation="MKQWWQDRTTRERRIVLAAALVLLSIILYWNVWSPLQQHLQQQR
GQVQQLQQQLSWMQQQAPLVRQLKQQSASPREYSGDIASTLSNSSQGYQIVLKRIQPQ
GTNALVEMDTTSFEQLVSWLNMLEQQYGITPQQIDLQPAEVPGKAQVRRLLLGRNKE"
misc_feature complement(408514..408978)
/locus_tag="Tola_0358"
/note="Type II secretion system (T2SS), protein M; Region:
T2SM; pfam04612"
/db_xref="CDD:146989"
gene complement(408978..410165)
/locus_tag="Tola_0359"
/db_xref="GeneID:7884175"
CDS complement(408978..410165)
/locus_tag="Tola_0359"
/inference="protein motif:TFAM:TIGR01709"
/note="TIGRFAM: general secretion pathway protein L;
PFAM: General secretion pathway L;
KEGG: aha:AHA_0577 general secretion pathway protein L"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein L"
/protein_id="YP_002891575.1"
/db_xref="GI:237807135"
/db_xref="InterPro:IPR007812"
/db_xref="GeneID:7884175"
/translation="MNEFLLIRLGSRHQERVHWLVWSVTQQAVISSGQLDNAAQLSEL
TERAGHRPVYVLVPGCDVIFRELTLPGRLNAQTMRALPFMLEDEIASDVEQLHITVLA
HQGQQVNIAAVEQTQMQQWLSWLADAGLTAQQLLPDVLALPQPEGEQWSLLQLGDQWL
IRQSAWQGSVVDNDLFSAWMTCHQPYPALHSYTPPPAEPPAEWIVSLCELPMQLLAEQ
VPVQRIDLLQGAFRRVSTWKKQWLRWRLPAVLTGLLLLLFMANQGMEYVQLRQQQQQL
QQQMTALYRQLFPEEKRIVNPRAQLKQHLQGLQQAPLTDSFLSQLALLAPLLHKTPEI
ELQQLRFEADKQEFRLQISAKDFGMLDKFRNQANTTFATEMTNMQDQGGRVSGMLIIR
SKS"
misc_feature complement(408987..410153)
/locus_tag="Tola_0359"
/note="type II secretion system protein L; Region:
typeII_sec_gspL; TIGR01709"
/db_xref="CDD:162498"
misc_feature complement(409467..410153)
/locus_tag="Tola_0359"
/note="Type II secretion system (T2SS), protein L; Region:
T2SL; pfam05134"
/db_xref="CDD:203173"
misc_feature complement(408981..409454)
/locus_tag="Tola_0359"
/note="GspL periplasmic domain; Region: GspL_C; pfam12693"
/db_xref="CDD:193169"
gene complement(410162..411145)
/locus_tag="Tola_0360"
/db_xref="GeneID:7884176"
CDS complement(410162..411145)
/locus_tag="Tola_0360"
/inference="protein motif:PFAM:PF03934"
/note="PFAM: General secretion pathway protein K;
KEGG: aha:AHA_0576 general secretion pathway protein K"
/codon_start=1
/transl_table=11
/product="General secretion pathway protein K"
/protein_id="YP_002891576.1"
/db_xref="GI:237807136"
/db_xref="InterPro:IPR002173"
/db_xref="InterPro:IPR005628"
/db_xref="GeneID:7884176"
/translation="MKRQQGMALLVVLLLLAVMVTMASSMTQRFRMEWQRTYNQQLQL
QNYWYLLGSETLISKVLVQDFKDNPEKNSLAQYWAIEGQVFPVENAILQGVVRDSQAC
FNLNSLTNDSTDETSTAVSATYRATVFKDLLINLGADDYRAQQITAAVQDWLDTNTIA
RSLGAEDSEYEALTPPYLPANGLMQDVSELRAVRGMDAALYRRLLPQVCVIPEKTLQV
NANTLRTVQAPLLAALFLNDLSVDDARNILEQRPREGWDSVAEFLELGALSNTAAAGD
QVQSALTIKSFYFLATLQAETDNYQTRLISLFQRQSDNQVTVIRRHFGGLE"
misc_feature complement(410192..411061)
/locus_tag="Tola_0360"
/note="Type II secretion system (T2SS), protein K; Region:
T2SK; pfam03934"
/db_xref="CDD:146520"
gene complement(411142..411789)
/locus_tag="Tola_0361"
/db_xref="GeneID:7884177"
CDS complement(411142..411789)
/locus_tag="Tola_0361"
/inference="protein motif:TFAM:TIGR01711"
/note="TIGRFAM: general secretion pathway protein J;
KEGG: asa:ASA_3781 general secretion pathway protein J"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein J"
/protein_id="YP_002891577.1"
/db_xref="GI:237807137"
/db_xref="InterPro:IPR001120"
/db_xref="InterPro:IPR010055"
/db_xref="InterPro:IPR012902"
/db_xref="GeneID:7884177"
/translation="MLTIPSAKSQQTGFTLLEVLLALVIFAMLSLSAYAVLQGVMRND
EVSREKITRLSELQRAFATLARDFTQVIPRPTRINGETSTILFQAERFKLGSEDGAVT
LVRAGWFNPGGELRRSELQKVGYRLRQQTLERLTYIYPDAVTGTEPTATPLLSRVTAF
SLRFYNNGQWLTQWITPDELPAAVEITITAEDYGTIRRLFLLTGTSDTASSGSRE"
misc_feature complement(411703..411789)
/locus_tag="Tola_0361"
/note="Type IV pilin N-term methylation site GFxxxE;
Region: N_methyl_2; pfam13544"
/db_xref="CDD:205722"
misc_feature complement(411184..411753)
/locus_tag="Tola_0361"
/note="type II secretion system protein J; Region: gspJ;
TIGR01711"
/db_xref="CDD:130772"
misc_feature complement(411178..411660)
/locus_tag="Tola_0361"
/note="Type II secretion system (T2SS), protein J; Region:
T2SJ; pfam11612"
/db_xref="CDD:152048"
gene complement(411796..412143)
/locus_tag="Tola_0362"
/db_xref="GeneID:7884178"
CDS complement(411796..412143)
/locus_tag="Tola_0362"
/inference="protein motif:TFAM:TIGR01707"
/note="TIGRFAM: general secretion pathway protein I;
PFAM: type II secretion system protein I/J;
KEGG: asa:ASA_3780 general secretion pathway protein I"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein I"
/protein_id="YP_002891578.1"
/db_xref="GI:237807138"
/db_xref="InterPro:IPR003413"
/db_xref="InterPro:IPR010052"
/db_xref="GeneID:7884178"
/translation="MTLLEVMVAMAIFAVAGIALMKTVTEQVVALATLEEKTFASWVA
DNQLVTIRLTEKWPNLNWSNGTEEMAGRTYYWRWHGVETADPQFRAIDVEVRDAEQAP
DPRATMRSYVSKN"
misc_feature complement(411856..412143)
/locus_tag="Tola_0362"
/note="type II secretion system protein I; Region: gspI;
TIGR01707"
/db_xref="CDD:162497"
misc_feature complement(412081..412143)
/locus_tag="Tola_0362"
/note="Type IV pilin N-term methylation site GFxxxE;
Region: N_methyl_2; cl06830"
/db_xref="CDD:212281"
misc_feature complement(411802..412044)
/locus_tag="Tola_0362"
/note="Type II secretion system (T2SS), protein I; Region:
T2SI; pfam02501"
/db_xref="CDD:202261"
gene complement(412155..412817)
/locus_tag="Tola_0363"
/db_xref="GeneID:7884179"
CDS complement(412155..412817)
/locus_tag="Tola_0363"
/inference="protein motif:TFAM:TIGR01708"
/note="TIGRFAM: general secretion pathway protein H;
KEGG: ecf:ECH74115_B0007 general secretion pathway protein
H"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein H"
/protein_id="YP_002891579.1"
/db_xref="GI:237807139"
/db_xref="InterPro:IPR002416"
/db_xref="InterPro:IPR010053"
/db_xref="InterPro:IPR012902"
/db_xref="GeneID:7884179"
/translation="MRKTMRGFTLIEIMLVIVIIGCATGIIVLSIPGGPSPKLGNDLA
EESQQLAATIQVMSEQATQQGRTIGLHISDHGYQFMIRQQTTAANDDTVTQSTSQALD
TLPDWDHQVWQPYTSEKLRTAGEFDEKVSLALTLDGLQLQEEENRLGRSNPQWFDTEN
QLEAKTPQILLLPSGEITPFSLTLEELGSNSTLYRQIKGQENGQITVLNEPEDNVSGG
HS"
misc_feature complement(412746..412802)
/locus_tag="Tola_0363"
/note="Prokaryotic N-terminal methylation motif; Region:
N_methyl; pfam07963"
/db_xref="CDD:116573"
misc_feature complement(<412497..412799)
/locus_tag="Tola_0363"
/note="type II secretion system protein H; Region:
typeII_sec_gspH; TIGR01708"
/db_xref="CDD:130769"
gene complement(412817..413257)
/locus_tag="Tola_0364"
/db_xref="GeneID:7884180"
CDS complement(412817..413257)
/locus_tag="Tola_0364"
/inference="protein motif:TFAM:TIGR01710"
/note="TIGRFAM: general secretion pathway protein G;
PFAM: type II secretion system protein G;
KEGG: asa:ASA_3778 general secretion pathway protein G"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein G"
/protein_id="YP_002891580.1"
/db_xref="GI:237807140"
/db_xref="InterPro:IPR000983"
/db_xref="InterPro:IPR001120"
/db_xref="InterPro:IPR002416"
/db_xref="InterPro:IPR010054"
/db_xref="InterPro:IPR012902"
/db_xref="InterPro:IPR013545"
/db_xref="GeneID:7884180"
/translation="MQRRQQRGFTLLEIMVVIVILGILASLVVPNLMGNKDQADHQKA
VSDIVALENALDMYKLDNSRYPTTDQGLNALLIKPDSDPVPRNYKDGGYIKRLPADPW
QSEYQLLSPGEHGTIDVFSMGPDGQSGTEDDVGNWALDKRDNQQ"
misc_feature complement(413171..413242)
/locus_tag="Tola_0364"
/note="prepilin-type N-terminal cleavage/methylation
domain; Region: IV_pilin_GFxxxE; TIGR02532"
/db_xref="CDD:211747"
misc_feature complement(412844..413239)
/locus_tag="Tola_0364"
/note="type II secretion system protein G; Region:
typeII_sec_gspG; TIGR01710"
/db_xref="CDD:130771"
misc_feature complement(412847..413161)
/locus_tag="Tola_0364"
/note="Type II secretion system (T2SS), protein G; Region:
T2SG; pfam08334"
/db_xref="CDD:192005"
gene complement(413287..414507)
/locus_tag="Tola_0365"
/db_xref="GeneID:7884181"
CDS complement(413287..414507)
/locus_tag="Tola_0365"
/inference="protein motif:TFAM:TIGR02120"
/note="TIGRFAM: general secretion pathway protein F;
PFAM: type II secretion system protein;
KEGG: aha:AHA_0571 general secretion pathway protein F"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein F"
/protein_id="YP_002891581.1"
/db_xref="GI:237807141"
/db_xref="InterPro:IPR001992"
/db_xref="InterPro:IPR003004"
/db_xref="InterPro:IPR011850"
/db_xref="GeneID:7884181"
/translation="MAAFAYQALDAKGRNKEGMIEADSPRQARQALREQGLTPVSLTE
AVEQVKQQSLKRSWLQPRISTAELALLTRQLATLVAAALPIEEALKAVAQQTEKARLS
TLVAAVRTKVLEGHSLADGMSAFPSVFDQLYRAMVAAGEKSGHLEIVLNRLADYTEQR
QQMKNKLLQAMIYPIILTLVAISVISILLATVVPKVVEQFIHMKQELPFSTRFLMGAS
DLVRDYGLWFVLLIAIALILWRGWVVKPANRRRYHAILLRLPVIGKVSRGLNTARFAR
TLSILNSSAVPLLEGMRISGDVLSNDEAKIRVTVAAERVREGSSLQTSLEQTKLFPPM
MLHMIASGERSGELDNMLERAADNQDREFESQVNIALSIFEPALVVSMAVIVLFIVLA
ILQPILQLNNMIGR"
misc_feature complement(413296..414498)
/locus_tag="Tola_0365"
/note="type II secretion system protein F; Region: GspF;
TIGR02120"
/db_xref="CDD:162711"
misc_feature complement(413926..414297)
/locus_tag="Tola_0365"
/note="Type II secretion system (T2SS), protein F; Region:
T2SF; pfam00482"
/db_xref="CDD:201255"
misc_feature complement(413320..413688)
/locus_tag="Tola_0365"
/note="Type II secretion system (T2SS), protein F; Region:
T2SF; pfam00482"
/db_xref="CDD:201255"
gene complement(414509..416011)
/locus_tag="Tola_0366"
/db_xref="GeneID:7884182"
CDS complement(414509..416011)
/locus_tag="Tola_0366"
/inference="protein motif:TFAM:TIGR02533"
/note="KEGG: aha:AHA_0570 general secretory pathway
protein E;
TIGRFAM: general secretory pathway protein E;
PFAM: type II secretion system protein E;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="general secretory pathway protein E"
/protein_id="YP_002891582.1"
/db_xref="GI:237807142"
/db_xref="InterPro:IPR001482"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013369"
/db_xref="GeneID:7884182"
/translation="MPQESTATVIEHEQPVRLNFSFARDHGVLLQWQQAEPVLFCRTG
VSAQTLQEIRRLLRRPFRLHWLDADAFEQQLTDDYQRDSSEARQLMEDIGNEVDFFTL
AEELPTSEDLLDADDDAPIIRLINAMLSEAIKSEASDIHIETFEKHLIIRFRIDGVLR
EILRPQRKLASLLVSRIKVMAKLDIAEKRVPQDGRIGLRIGGRAVDVRVSTMPSSYGE
RVVLRLLDKNNVRLELKQLGMTDANRAHIADLIQKPHGIILVTGPTGSGKSTTLYAAL
SEINTKDRNILTVEDPIEYDLEGVGQTQVNPKVDMTFARGLRAILRQDPDVVMVGEIR
DVETAQIAVQASLTGHLVLSTLHTNTAIGAITRLQDMGVEPFLLSTSLLAVLAQRLVR
TLCPVCKQPQLLSEEERQRYELPVGVTHLFKAGGCDACNFTGYRGRTGIYELLIVDEK
VREAIHAGAGEFAIEHLIRSHTPSIRADGLQKVLNGETTLEEVMRVTRED"
misc_feature complement(414521..415963)
/locus_tag="Tola_0366"
/note="type II secretion system protein E; Region:
type_II_gspE; TIGR02533"
/db_xref="CDD:131585"
misc_feature complement(414698..415486)
/locus_tag="Tola_0366"
/note="PulE/GspE The type II secretory pathway is the main
terminal branch of the general secretory pathway (GSP).
It is responsible for the export the majority of
Gram-negative bacterial exoenzymes and toxins. PulE is a
cytoplasmic protein of the GSP, which...; Region:
PulE-GspE; cd01129"
/db_xref="CDD:29995"
misc_feature complement(415205..415228)
/locus_tag="Tola_0366"
/note="Walker A motif; other site"
/db_xref="CDD:29995"
misc_feature complement(order(415016..415021,415139..415144,
415148..415150,415205..415213,415223..415225))
/locus_tag="Tola_0366"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29995"
misc_feature complement(415016..415033)
/locus_tag="Tola_0366"
/note="Walker B motif; other site"
/db_xref="CDD:29995"
gene complement(416011..418068)
/locus_tag="Tola_0367"
/db_xref="GeneID:7884183"
CDS complement(416011..418068)
/locus_tag="Tola_0367"
/inference="protein motif:TFAM:TIGR02517"
/note="TIGRFAM: general secretion pathway protein D;
PFAM: type II and III secretion system protein; NolW
domain protein;
KEGG: aha:AHA_0569 general secretion pathway protein D"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein D"
/protein_id="YP_002891583.1"
/db_xref="GI:237807143"
/db_xref="InterPro:IPR001775"
/db_xref="InterPro:IPR004845"
/db_xref="InterPro:IPR004846"
/db_xref="InterPro:IPR005644"
/db_xref="InterPro:IPR013356"
/db_xref="GeneID:7884183"
/translation="MKQFLKRSLVIGCLCTQLGISPALAAEYSASFKGTDIQEFINTV
GKNLGKTIIVDPSVRGTINVRSYDLLNEEQYYQFFLSVLDVYGFAVVPMPNGILKVVK
AQNAKTSSIPVADETRTGSGDEMVTRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYE
PSNVLLLTGRAAVVNRLVEIVRRVDKVGDENVDVIKLKYASAGEMVRLITALTKNDKN
ALTNVLTPKVVADERTNAVVISGENQGRQRIVTMIRQLDREQQTQGNTRVFYLKYANA
KNLVEVLSGTSKTIQNEKNSASGSMTATGNTADSASSSGSGSSSSGYNGKDLSIVADE
QTNALVITAQPDVMQELERIIAKLDIRRAQVLVEAIIVEIQDGDTLNFGVQWANTNGG
GTQFTATGLPTTTVANAANEWRNDGELSSTSTAALSSFNGLVAGFYEGNWAGLVTALS
SNTKSNILATPSIVTLDNKEAAFNVGQEVPVVTGSQSSTAGSVYSTVERKTVGTKLKV
TPQINEGDSVLLEVEQEVSSVASSSSTDSSSSSSNSSLGSTFNTRTVKNSVLVKSGET
VVLGGLLSNNTSESVYKVPLLGDIPILGYLFRYNGTSTTKQNLMVFIHPTILRDPVTY
TGVSSSKYNLFRAEQIAQDEDADSLSLPVNRPVLPAYGTETTLSPKMKALLEQQGQAG
SLQ"
misc_feature complement(416185..417975)
/locus_tag="Tola_0367"
/note="type II secretion system protein D; Region:
type_II_gspD; TIGR02517"
/db_xref="CDD:162900"
misc_feature complement(417511..417654)
/locus_tag="Tola_0367"
/note="Bacterial type II/III secretion system short
domain; Region: Secretin_N; pfam03958"
/db_xref="CDD:202830"
misc_feature complement(417289..417495)
/locus_tag="Tola_0367"
/note="Bacterial type II/III secretion system short
domain; Region: Secretin_N; pfam03958"
/db_xref="CDD:202830"
misc_feature complement(416983..417273)
/locus_tag="Tola_0367"
/note="Bacterial type II/III secretion system short
domain; Region: Secretin_N; pfam03958"
/db_xref="CDD:202830"
misc_feature complement(416212..416727)
/locus_tag="Tola_0367"
/note="Bacterial type II and III secretion system protein;
Region: Secretin; pfam00263"
/db_xref="CDD:201120"
gene complement(418092..418331)
/locus_tag="Tola_0368"
/pseudo
/db_xref="GeneID:7884184"
gene complement(418438..419442)
/locus_tag="Tola_0369"
/db_xref="GeneID:7884185"
CDS complement(418438..419442)
/locus_tag="Tola_0369"
/inference="protein motif:PFAM:PF00165"
/note="PFAM: helix-turn-helix- domain containing protein
AraC type;
SMART: helix-turn-helix- domain containing protein AraC
type;
KEGG: asa:ASA_2543 AraC family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_002891584.1"
/db_xref="GI:237807144"
/db_xref="InterPro:IPR000005"
/db_xref="GeneID:7884185"
/translation="MNKSVSNLLAKKMLTHLGSKGLDTDRICKACNILPTDITNPGGR
IIAAKHYKLLTETIPYLDFNERVFSQNLSSLYDDYPELIGYCLNSRNPFDAIHAYSKY
RTIIGNCDSFIITETDDKMSIEYINEGSKILGSSQAIFNFSSILKIMKKYEENYSIKI
SLTDGIGKNSPLEDFFGTRCQWNEKKNILEINKTKTEMAYEKYNSTLADFQKEKLDKK
ISELSENIGFASIVSRIVLNTLHNKESSDDENILDSICYKLNMSRWTLNRHLHLEGVN
FQSILKEIRMKEACRLLKESHLTLQEISEIIGFSSQSTFTRFFKGQFDVNPSNFRKNN
"
misc_feature complement(418444..418671)
/locus_tag="Tola_0369"
/note="Helix-turn-helix domain; Region: HTH_18; pfam12833"
/db_xref="CDD:205096"
misc_feature complement(418447..418560)
/locus_tag="Tola_0369"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene complement(419741..420589)
/locus_tag="Tola_0370"
/db_xref="GeneID:7884186"
CDS complement(419741..420589)
/locus_tag="Tola_0370"
/inference="protein motif:TFAM:TIGR01713"
/note="TIGRFAM: general secretion pathway protein C;
KEGG: aha:AHA_0568 general secretion pathway protein C"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein C"
/protein_id="YP_002891585.1"
/db_xref="GI:237807145"
/db_xref="InterPro:IPR001639"
/db_xref="GeneID:7884186"
/translation="MQLLTIQNWCLSENGLSALRRAAVLLLLVGCSYQLARLSWQLLP
ASQTTAPASVSTNIPATPGDQQESQQRLAAIREAALFGIDVQPQDRGTTAAPKSRLNA
QLTGIMASNIASRSIAIIARNGQQQSYAIGDVIQGTDARITEIFPDRIIITRQQQDEA
LFLDENAATAPPAAAPAPGNITGLRQQIMKNPAQLQDYLSITPVMENNQLQGYRLNPG
RNPEIFGQSGLQANDLAISINGLDLRDKGDAVQAMQQLAHQAEMNITVLRNGAEQDIY
INLAQP"
misc_feature complement(419753..420496)
/locus_tag="Tola_0370"
/note="type II secretion system protein C; Region:
typeII_sec_gspC; TIGR01713"
/db_xref="CDD:162500"
misc_feature complement(420107..420337)
/locus_tag="Tola_0370"
/note="Type IV pilus biogenesis; Region: Pilus_PilP;
pfam11356"
/db_xref="CDD:204631"
misc_feature complement(419759..>419914)
/locus_tag="Tola_0370"
/note="PDZ domain, also called DHR (Dlg homologous region)
or GLGF (after a conserved sequence motif). Many PDZ
domains bind C-terminal polypeptides, though binding to
internal (non-C-terminal) polypeptides and even to lipids
has been demonstrated; Region: PDZ; cl00117"
/db_xref="CDD:206846"
gene 420775..421365
/gene="nudE"
/locus_tag="Tola_0371"
/db_xref="GeneID:7884187"
CDS 420775..421365
/gene="nudE"
/locus_tag="Tola_0371"
/inference="protein motif:PFAM:PF00293"
/note="ADP-sugar pyrophosphatase; catalyzes the formation
of D-ribose 5-phosphate from ADP-ribose; can also act on
ADP-mannose and ADP-glucose"
/codon_start=1
/transl_table=11
/product="ADP-ribose diphosphatase NudE"
/protein_id="YP_002891586.1"
/db_xref="GI:237807146"
/db_xref="InterPro:IPR000086"
/db_xref="GeneID:7884187"
/translation="MSEKPVKPERALPEILQRDVVAQSRLFRVEALQLRFSNGEERVY
ERIPGGNRHAVMIVPVLNKDTLMLIREYAAGTHSYEIGFPKGLVDMGETDAEAANREL
QEEIGMAARQLTFLKQVSLAPGFMNARMGIFLAEDLFPQQLTGDEPEPLEVIPWPLKD
AEALLEHPQFHEARSVAALLLLLRQVKDGVLSDHPA"
misc_feature 420796..421302
/gene="nudE"
/locus_tag="Tola_0371"
/note="adenosine nucleotide hydrolase NudE; Provisional;
Region: nudE; PRK11762"
/db_xref="CDD:183303"
misc_feature 420931..421302
/gene="nudE"
/locus_tag="Tola_0371"
/note="ADP-ribose pyrophosphatase (ADPRase) catalyzes the
hydrolysis of ADP-ribose and a variety of additional
ADP-sugar conjugates to AMP and ribose-5-phosphate. Like
other members of the Nudix hydrolase superfamily, it
requires a divalent cation, such as Mg2+; Region:
ADPRase_NUDT5; cd03424"
/db_xref="CDD:72882"
misc_feature order(420931..420933,420982..420984,420988..420990,
420994..420996,421009..421011,421126..421137,
421141..421143,421147..421161,421219..421224,
421228..421230,421267..421272,421294..421296)
/gene="nudE"
/locus_tag="Tola_0371"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:72882"
misc_feature order(420934..420936,420991..420993,421033..421035,
421075..421077,421087..421089,421156..421158)
/gene="nudE"
/locus_tag="Tola_0371"
/note="ADP-ribose binding site [chemical binding]; other
site"
/db_xref="CDD:72882"
misc_feature order(420991..420993,421027..421035,421075..421077,
421087..421089,421156..421158,421219..421221)
/gene="nudE"
/locus_tag="Tola_0371"
/note="active site"
/db_xref="CDD:72882"
misc_feature order(421030..421041,421045..421098)
/gene="nudE"
/locus_tag="Tola_0371"
/note="nudix motif; other site"
/db_xref="CDD:72882"
misc_feature order(421075..421077,421087..421089,421219..421221)
/gene="nudE"
/locus_tag="Tola_0371"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:72882"
gene complement(421362..422066)
/locus_tag="Tola_0372"
/db_xref="GeneID:7884188"
CDS complement(421362..422066)
/locus_tag="Tola_0372"
/inference="similar to AA sequence:KEGG:PSPA7_6229"
/note="KEGG: pap:PSPA7_6229 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891587.1"
/db_xref="GI:237807147"
/db_xref="GeneID:7884188"
/translation="MAKLRLCMILLAGITLLPAQARVNAEDHHAFWLWSAVRPQPVLA
QAESIYILQGQISERRGQTRFIPQGIATPRLRHGQIWLAYRVETLQWSESIYQSIAQQ
IIRWKTQGNPVTGIQIDFDARTLQMQQYITFLQELRRRLPAPYALSITGLLDWSNHTS
PALVNQLAGIVDEVVVQTYQGRTTISNYADYLPRLAQLRIPFKVGLVQHGDWQAPDYL
EQAAFFRGYVVFLLNN"
misc_feature complement(421365..421856)
/locus_tag="Tola_0372"
/note="Protein of unknown function (DUF3142); Region:
DUF3142; pfam11340"
/db_xref="CDD:151781"
gene complement(422066..424228)
/locus_tag="Tola_0373"
/db_xref="GeneID:7884189"
CDS complement(422066..424228)
/locus_tag="Tola_0373"
/inference="similar to AA sequence:KEGG:PSPA7_6231"
/note="KEGG: pap:PSPA7_6231 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002891588.1"
/db_xref="GI:237807148"
/db_xref="GeneID:7884189"
/translation="MHWRHIITGGVILSALFQWPAQACSDDSCYPTWDLKKDLLDTCN
NTPFLSPANDSRINLQLLLADHSHQPLTVPTADDYYKEQGYALVPFPVDLADSTETPA
SDASPLVTLAVQMGVSSDTASGLLAQSTIWEGSRCASNNQQTALRYLQQLVQAGDIPA
EERRQLATSRLAILQSCAADPEQQAGLLPDNIQSESGQLFANYLQGALAFYNGDFTRS
IAAFNVLSQSSQPWLKETAIYMQGRVFLNAAQQNAFDDIGYPSNDKIDLAALQAAESA
FNRYLTAYPQGQYSASATGLLRRVYWLMNDQKRLAQAYAYWFGHPLSEANITSNQLVQ
EIDNKLLLSFSDTGSIDDPHLLAIIDLMLMRQRSSDDSRPPFTLTQLQAQQSRFARQP
ELYTYLLGAYALYVEKDADKTLTILPESSAEEIPDYLGFSQQTLRGFALEMQEQWSQA
EQLWLKMLQQVTQPVQRQQLELSLAMNYERSQKLEQVFASNSPIKTPMIREILLRNVA
APVLLRQQISRPLSAQEHDVALFTLLYKDLTRSMYADFLKDINLLPEKVSTAPLFMGF
TYNTQQALALFQWDGKNATEYQCPALSAVVQTLQDDSSNPRALNCLGEFIFRHGLDDF
PLNNQPESNELGGTESHFTGKLFSRLDGYQQVIASQQAAREDKAYALYRAVNCFAPSG
YNSCGTQDIPIAQRKQWFYTLKSQFGDTSWAQQLKYYW"
gene complement(424335..425237)
/locus_tag="Tola_0374"
/db_xref="GeneID:7884190"
CDS complement(424335..425237)
/locus_tag="Tola_0374"
/inference="protein motif:TFAM:TIGR03298"
/note="specific inhibitor of chromosomal initiation of
replication in vitro; binds the three 13-mers in the
origin (oriC) to block initiation of replication; also
controls genes involved in arginine transport"
/codon_start=1
/transl_table=11
/product="chromosome replication initiation inhibitor
protein"
/protein_id="YP_002891589.1"
/db_xref="GI:237807149"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="InterPro:IPR017685"
/db_xref="GeneID:7884190"
/translation="MNHLDYKLLQALDVVLREQSFERAAQQLHLTQSAVSQRIKQLEL
LVAQPVLIRSQPLQLTAMGQLLLTHYQQVQQLERELLPHLSPSAPAKPLPVTIATNAD
SLATWLIPALTPLLQPGLIELNLLIEDENRTIDRLRRGEAFGAITTQQEPLPGCQSDL
LGYMDYVLTASPGFIRQYFPDGLTEQALRKAPGVAFDQRDDMHVSFVEKHFGLPPGSY
PCHTVRSSEAFVALAKAGAAYCLIPKLQITTELARGELVELMPETPLLQRGLYWQRWV
LERGIYRQISQNLLIWSSQVLPRQ"
misc_feature complement(424344..425231)
/locus_tag="Tola_0374"
/note="chromosome replication initiation inhibitor
protein; Validated; Region: PRK03635"
/db_xref="CDD:179616"
misc_feature complement(425046..425219)
/locus_tag="Tola_0374"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(424371..424958)
/locus_tag="Tola_0374"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulator, ArgP (IciA), for
arginine exporter (ArgO); contains the type 2 periplasmic
binding fold; Region: PBP2_IciA_ArgP; cd08428"
/db_xref="CDD:176119"
misc_feature complement(order(424533..424538,424542..424547,
424563..424580,424851..424871,424878..424880,
424890..424892,424899..424904,424908..424913))
/locus_tag="Tola_0374"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176119"
gene 425333..425956
/locus_tag="Tola_0375"
/db_xref="GeneID:7884191"
CDS 425333..425956
/locus_tag="Tola_0375"
/inference="protein motif:PFAM:PF01810"
/note="PFAM: Lysine exporter protein (LYSE/YGGA);
KEGG: eta:ETA_28110 arginine exporter protein ArgO"
/codon_start=1
/transl_table=11
/product="lysine exporter protein LysE/YggA"
/protein_id="YP_002891590.1"
/db_xref="GI:237807150"
/db_xref="InterPro:IPR001123"
/db_xref="GeneID:7884191"
/translation="MLNGAIYLQGMLVGASLIIPIGAQNAFVLERGIRRNHAMLVAGL
CFLADAFLIALGVGGAGKVIAQSLLLQLLLTLGGAAFLLRYGWSSLQRAWRAMAQTLE
QKGGMSRIQAVTMTLAVTLLNPHVYLDTVMIQGAVAGQYPREQQLSFALGSISASLCW
FFGLALLASWLAPQLQRVRVQQCIDTGVGLLMWLLAFGLLRHAASLV"
misc_feature 425345..425899
/locus_tag="Tola_0375"
/note="LysE type translocator; Region: LysE; cl00565"
/db_xref="CDD:207111"
gene 426067..426498
/locus_tag="Tola_0376"
/db_xref="GeneID:7884192"
CDS 426067..426498
/locus_tag="Tola_0376"
/inference="protein motif:PFAM:PF00011"
/note="PFAM: heat shock protein Hsp20;
KEGG: afr:AFE_2086 heat shock protein, HSP20 family"
/codon_start=1
/transl_table=11
/product="heat shock protein Hsp20"
/protein_id="YP_002891591.1"
/db_xref="GI:237807151"
/db_xref="InterPro:IPR002068"
/db_xref="GeneID:7884192"
/translation="MRLEKWNPFRDLDDIFHNYQRSFLTPSLSRESMVGSEWVPAVDI
VEDDKEYQLKVEIPEIPREAVKLQINHGMLTITGERKMEKSDEKHHRIERYYGSFSRS
FTLPDDVKAENISANFSNGMLYVHMMKSTPTGDKPLEIEIH"
misc_feature 426067..426495
/locus_tag="Tola_0376"
/note="Molecular chaperone (small heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: IbpA; COG0071"
/db_xref="CDD:30420"
misc_feature 426193..426453
/locus_tag="Tola_0376"
/note="Alpha-crystallin domain (ACD) of
alpha-crystallin-type small(s) heat shock proteins (Hsps).
sHsps are small stress induced proteins with monomeric
masses between 12 -43 kDa, whose common feature is the
Alpha-crystallin domain (ACD). sHsps are generally...;
Region: ACD_sHsps-like; cd06464"
/db_xref="CDD:107221"
misc_feature order(426193..426207,426226..426228,426232..426234,
426238..426243,426367..426369,426427..426432)
/locus_tag="Tola_0376"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:107221"
gene complement(426555..427658)
/locus_tag="Tola_0377"
/db_xref="GeneID:7884193"
CDS complement(426555..427658)
/locus_tag="Tola_0377"
/EC_number="2.1.1.35"
/inference="protein motif:TFAM:TIGR02143"
/note="catalyzes the formation of 5-methyl-uridine at
position 54 in all tRNAs"
/codon_start=1
/transl_table=11
/product="tRNA (uracil-5-)-methyltransferase"
/protein_id="YP_002891592.1"
/db_xref="GI:237807152"
/db_xref="InterPro:IPR010280"
/db_xref="InterPro:IPR011869"
/db_xref="GeneID:7884193"
/translation="MTNAVHSDALYQQQLHEKQQRLTQLLAPFQAPEPEVFASAPSHY
RMRAEFRIWHEGVDELYYVMFNSETKQRYYVHEFPTGSQLINRLMPRLLELIRGNHTL
KYKLFQIDFLTTLSGEALISLLYHKTLNEAWQPAATELRQALRAEFGEVDVVGRAHKQ
KIVLEREYVLEQLQVGDRTLEYMQVENSFTQPNAGMNQQMLGWATDVTADCQGDLLEL
YCGNGNFSLALAKNFNRVLATEIAKPSVHAAQHNIAVNKIDNVQILRMSAEEFTQAMN
GEREFNRLKGIDLQSYQCNTILVDPPRAGLDPATVAMIQAYEQILYISCNPETLCDNL
KTLCQTHNIARCALFDQFPFTHHMESGVWLVRK"
misc_feature complement(426558..427628)
/locus_tag="Tola_0377"
/note="tRNA (uracil-5-)-methyltransferase; Region:
trmA_only; TIGR02143"
/db_xref="CDD:131198"
misc_feature complement(426696..427019)
/locus_tag="Tola_0377"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(426759..426761,426855..426863,
426936..426941,426987..427007))
/locus_tag="Tola_0377"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
misc_binding 427804..427998
/note="Cobalamin riboswitch as predicted by Rfam(RF00174),
score 96.74"
/bound_moiety="adenosylcobalamin"
gene 428051..429904
/locus_tag="Tola_0378"
/db_xref="GeneID:7884194"
CDS 428051..429904
/locus_tag="Tola_0378"
/inference="protein motif:PFAM:PF00593"
/note="PFAM: TonB-dependent receptor; TonB-dependent
receptor plug;
KEGG: vha:VIBHAR_00261 phosphatidylglycerophosphatase"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_002891593.1"
/db_xref="GI:237807153"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR012910"
/db_xref="GeneID:7884194"
/translation="MSKRLTASVLSALAIAAPTHAEESTGLPITVTATRFAEPTASVL
APVNIITRKDIEQLHARSLADVVKTLPGVEMVSNGGRGQQASVIVRGATSAETLVLMD
GVRINSATNGATDFSSIPLNQVERVEFVRGARASVYGSDAIGGVINIITRGTAGQTKH
TLNGSAGSRDYQNLNGSTSFDINQQQHLKLAAGYETEDGYNVHPVEGVNDGDEHGFLG
RNAMLDYQNQLTDEVNVYGAMHWTRNTMQSDGSYSYGDYSQHERDETWEENTHYQLGT
KYQKDRYQTELNTSLINNDMYYYPDTISRDEASSVYKTSQYQLSWLNNYQITDPWTVG
AGVDLRRDVLHSDSQSSGSAFFDEDKNRNNVSVYALSQYRWEQWLGELSGRTDDNQQY
GRHNTWQAGLGWNFLPEYRLSARYGTAFRAPTFNDLYTPYSVSPDLKPETSKNSEIAL
EGTTQEVLWRVTAYRNDLEDMIEWAPDSSGYWYPGNVGRARIKGIELEAEFATGWLTH
KLSADFKNARDLEDGTVLSRRAKRNYKWTGMANWDKWDASLTGQYQSERYDSSTRLAP
YALWNAAAGYHVLPQLRIGGRIDNLFDKDYALASGYATPERSYYVDFSYQL"
misc_feature 428069..429898
/locus_tag="Tola_0378"
/note="Outer membrane cobalamin receptor protein [Coenzyme
metabolism]; Region: BtuB; COG4206"
/db_xref="CDD:33936"
misc_feature 428186..429898
/locus_tag="Tola_0378"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(428186..428215,428243..428272,428309..428326,
428345..428368,428411..428443,428477..428503)
/locus_tag="Tola_0378"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(428954..428956,429035..429037)
/locus_tag="Tola_0378"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene complement(429983..431890)
/locus_tag="Tola_0379"
/db_xref="GeneID:7884195"
CDS complement(429983..431890)
/locus_tag="Tola_0379"
/inference="protein motif:TFAM:TIGR01273"
/note="catalyzes the formation of agmatine from arginine
in putrescine and spermidine biosynthesis"
/codon_start=1
/transl_table=11
/product="arginine decarboxylase"
/protein_id="YP_002891594.1"
/db_xref="GI:237807154"
/db_xref="InterPro:IPR000183"
/db_xref="InterPro:IPR002985"
/db_xref="GeneID:7884195"
/translation="MANWSCQDALKMYNVPYWGAGFFNIDALGRVVVTPDKTRLDCKI
ALVDIIEQLRKQGYATPVLLRFPDIIKTRINALFGAFEQAIQSYGYKGRYQCVYPIKV
NQQNQVIESVTRAFADKPALGLEAGSKPELLAVLSHHHDLGSVIVCNGYKDREYVRHA
LLGSLLGHHVYIVVEKPSELELILDEAARLNITPRIGVRARLASQGSGKWQASGGEKS
KFGLNAAQILRLVERLREADKLDCLQLVHFHLGSQIANIRDIQGGIRECGRFYAELRH
LGANIEVVDVGGGLGVDYEGSRSQSHCSANYNLREYANNVVWGIGDVCAEFDLPHPMI
ISESGRAITAHHAVLISNIVGMESQLPTSLPDAPDAEAPMLLQNMWDSWKELHEKEDP
GLLEIFHDSVSDLADVHTQYTLGMLSLHQRAWAEDLHLNLCLKLKVMLDPVNRMHRNL
QDELNEKLADKCFVNFSLFQSLPDAWGIDQIFPIMPLSGLDQQPTRRGVIMDITCDSD
GMIKEYVDGVGIENSLPMPEMRNDETNYMGFFLVGAYQEILGDLHNLFGDTHSAEVCL
NDNGEPVITNIIKGDNVDNLLRYVNIDTSVIRRDYQKLVAHPSLSEETRKALLEELEA
GLQGYAYLEDE"
misc_feature complement(429986..431890)
/locus_tag="Tola_0379"
/note="arginine decarboxylase; Provisional; Region:
PRK05354"
/db_xref="CDD:180035"
misc_feature complement(430745..431725)
/locus_tag="Tola_0379"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme Arginine Decarboxylase; Region: PLPDE_III_ADC;
cd06830"
/db_xref="CDD:143503"
misc_feature complement(order(430811..430813,430820..430831,
431228..431239,431345..431347,431357..431359,
431369..431371,431429..431431,431498..431503,
431507..431512,431588..431590,431711..431713))
/locus_tag="Tola_0379"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143503"
misc_feature complement(order(430871..430882,431024..431029,
431135..431137,431144..431146,431294..431296,
431444..431446,431516..431518,431588..431590,
431594..431596))
/locus_tag="Tola_0379"
/note="active site"
/db_xref="CDD:143503"
misc_feature complement(order(430871..430882,431024..431029,
431135..431137,431144..431146,431294..431296,
431444..431446,431516..431518,431588..431590,
431594..431596))
/locus_tag="Tola_0379"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143503"
misc_feature complement(431588..431590)
/locus_tag="Tola_0379"
/note="catalytic residues [active]"
/db_xref="CDD:143503"
misc_feature complement(430199..>430525)
/locus_tag="Tola_0379"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzymes; Region: PLPDE_III; cl00261"
/db_xref="CDD:206940"
gene complement(432149..433522)
/locus_tag="Tola_0380"
/db_xref="GeneID:7884196"
CDS complement(432149..433522)
/locus_tag="Tola_0380"
/inference="protein motif:TFAM:TIGR00785"
/note="TIGRFAM: anion transporter;
PFAM: sodium/sulphate symporter; Citrate transporter;
KEGG: aha:AHA_2430 divalent anion:Na+ symporter (DASS)
family protein"
/codon_start=1
/transl_table=11
/product="anion transporter"
/protein_id="YP_002891595.1"
/db_xref="GI:237807155"
/db_xref="InterPro:IPR001898"
/db_xref="InterPro:IPR004680"
/db_xref="GeneID:7884196"
/translation="MSDDTSTTGIFKSQYKPLILLLDIALLLILLNWLPFEPQINKGL
SLFLFIAVLWLSEAIHVTVTALLVPIMAVLLGIFGLQPAISHFANPTIYLFFGGFALA
AALHKQQLDQFLAQQILVLAKGRLQTAVGLLFGITALLSMWISNTATAAMMLPLAMGI
AVQLDQEKDRSTRTFILLGMAYSASIGGIGTLVGSPPNVIAAAQAHITFLQWLVFGIP
IVLILMPCAMAALYLVLRPQLNQQCAMQQMDFVWTRQHKLTLVIFSCTVLAWISSQQL
SVWLGGIDQLDTLIALVAAVMICITGVASWRDVERQTEWGVLMLFGGGLTLSAVLKET
GTSLFMAQQITAWFSHAHPLLLLLAIAAFVVFLTELASNTATAALMVPLFASVATNMG
MSVSIMSIMIAVSASCAFMLPVATPPNAIVYASGYVPQRDMIRVGFVLNIMCTILLAL
FAYYGGI"
misc_feature complement(432161..433393)
/locus_tag="Tola_0380"
/note="Di- and tricarboxylate transporters [Inorganic ion
transport and metabolism]; Region: CitT; COG0471"
/db_xref="CDD:30819"
misc_feature complement(432161..433393)
/locus_tag="Tola_0380"
/note="Permease SLC13 (solute carrier 13). The
sodium/dicarboxylate cotransporter NaDC-1 has been shown
to translocate Krebs cycle intermediates such as
succinate, citrate, and alpha-ketoglutarate across plasma
membranes rabbit, human, and rat kidney. It is...; Region:
SLC13_permease; cd01115"
/db_xref="CDD:73247"
misc_feature complement(order(432173..432211,432299..432358,
432410..432457,432530..432586,432632..432667,
432680..432688,432710..432748,432824..432868,
432932..433003,433028..433081,433085..433135,
433205..433258,433301..433342,433361..433372))
/locus_tag="Tola_0380"
/note="transmembrane helices; other site"
/db_xref="CDD:73247"
gene complement(433586..434062)
/locus_tag="Tola_0381"
/db_xref="GeneID:7884197"
CDS complement(433586..434062)
/locus_tag="Tola_0381"
/inference="protein motif:TFAM:TIGR02491"
/note="TIGRFAM: anaerobic ribonucleoside-triphosphate
reductase activating protein;
KEGG: aha:AHA_1232 anaerobic ribonucleotide
reductase-activating protein"
/codon_start=1
/transl_table=11
/product="anaerobic ribonucleoside-triphosphate reductase
activating protein"
/protein_id="YP_002891596.1"
/db_xref="GI:237807156"
/db_xref="InterPro:IPR001989"
/db_xref="InterPro:IPR012837"
/db_xref="GeneID:7884197"
/translation="MFYHQYYPIDVVNGPGTRCTLFVSGCEHQCRGCYNQSTWRTDSG
HPFTQEMADRIIADLNDTKIKRRGITFSGGDPLHPANQADVLALVKRIRAECPGKDIW
MWTGYLLAELTPDQQEITALIDVLVDGKFVQELADPSLVWRGSSNQVIHYLRQPAE"
misc_feature complement(433610..434029)
/locus_tag="Tola_0381"
/note="4Fe-4S single cluster domain; Region: Fer4_12;
pfam13353"
/db_xref="CDD:205533"
misc_feature complement(<433760..433990)
/locus_tag="Tola_0381"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature complement(order(433838..433843,433847..433849,
433961..433969,433973..433975,433979..433981,
433985..433987))
/locus_tag="Tola_0381"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene complement(434183..434917)
/locus_tag="Tola_0382"
/db_xref="GeneID:7884198"
CDS complement(434183..434917)
/locus_tag="Tola_0382"
/EC_number="4.2.1.1"
/inference="protein motif:PRIAM:4.2.1.1"
/note="PFAM: carbonic anhydrase;
KEGG: aha:AHA_3404 carbonic anhydrase"
/codon_start=1
/transl_table=11
/product="Carbonate dehydratase"
/protein_id="YP_002891597.1"
/db_xref="GI:237807157"
/db_xref="InterPro:IPR001148"
/db_xref="GeneID:7884198"
/translation="MKKNLFCAAMLLTSFSAFTAEQHAHWGYSGETGPENWAKLTPEF
GACAGKNQTPVNLDGFIKAELKPLKFNYKAGGSQILNNGHTVQVVYDAGSNVVIDGVE
YALKQFHFHAPSENQIKGESYPLEGHFVHADKDGNLAVVTVMFKEGHANEALESLWTH
MPAKEGDKIALSPANNALKFFPKDHAYYRFNGSLTTPPCTEGVRWIVMKKPVFVSKAQ
IDAFKKVMVHANNRPLQPINAREILG"
misc_feature complement(434186..434917)
/locus_tag="Tola_0382"
/note="Carbonic anhydrase [Inorganic ion transport and
metabolism]; Region: Cah; COG3338"
/db_xref="CDD:33147"
misc_feature complement(434189..434821)
/locus_tag="Tola_0382"
/note="Carbonic anhydrase alpha, prokaryotic-like
subfamily. Carbonic anhydrases (CAs) are zinc-containing
enzymes that catalyze the reversible hydration of carbon
dioxide in a two-step mechanism: a nucleophilic attack of
a zinc-bound hydroxide ion on carbon...; Region:
alpha_CA_prokaryotic_like; cd03124"
/db_xref="CDD:28766"
misc_feature complement(order(434333..434335,434534..434536,
434573..434575,434585..434587,434591..434593,
434597..434599,434666..434668))
/locus_tag="Tola_0382"
/note="active site"
/db_xref="CDD:28766"
misc_feature complement(order(434534..434536,434585..434587,
434591..434593))
/locus_tag="Tola_0382"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:28766"
gene complement(435037..435990)
/locus_tag="Tola_0383"
/db_xref="GeneID:7884199"
CDS complement(435037..435990)
/locus_tag="Tola_0383"
/inference="protein motif:TFAM:TIGR02207"
/note="TIGRFAM: lipid A biosynthesis lauroyl (or
palmitoleoyl) acyltransferase;
PFAM: lipid A biosynthesis acyltransferase;
KEGG: aha:AHA_3768 lipid A biosynthesis lauroyl
acyltransferase"
/codon_start=1
/transl_table=11
/product="lipid A biosynthesis lauroyl (or palmitoleoyl)
acyltransferase"
/protein_id="YP_002891598.1"
/db_xref="GI:237807158"
/db_xref="InterPro:IPR004960"
/db_xref="InterPro:IPR011920"
/db_xref="GeneID:7884199"
/translation="MRATQLPDTAPRLTAGLFHPRYWPQWFGHAVLWLIVQLPYPVLM
QLGAALGWLTMKILPRRVRIARTNLQLAFPEWDEETREQQIRENFANVGRAIFETGIA
WFWPDRRIRKIMQVVGAEHVEQAVANKQGMLLLSAHFMTLELNARMFGLLRPGVGVYR
PNTNPVLEYAQYHGRCKSNKYLVNRDDVKGMIKTLRQGEALWYAPDHDYGPHASVFVP
FLGVSDAATITGTATLARVKNTVVLPCYNIRLPQGGYQLIIEPPLQNYPTGDDIADAT
RSNQVLEAAVRKAPAQYMWLHRRFKSRPDGTKFRYNPGEQR"
misc_feature complement(435085..435942)
/locus_tag="Tola_0383"
/note="Bacterial lipid A biosynthesis acyltransferase;
Region: Lip_A_acyltrans; pfam03279"
/db_xref="CDD:112109"
misc_feature complement(435088..435651)
/locus_tag="Tola_0383"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: LABLAT-like; Region:
LPLAT_LABLAT-like; cd07984"
/db_xref="CDD:153246"
misc_feature complement(order(435364..435372,435505..435516,
435562..435564,435568..435570,435577..435579))
/locus_tag="Tola_0383"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153246"
gene 436123..437568
/locus_tag="Tola_0384"
/db_xref="GeneID:7884200"
CDS 436123..437568
/locus_tag="Tola_0384"
/inference="protein motif:TFAM:TIGR02199"
/note="TIGRFAM: rfaE bifunctional protein;
cytidyltransferase-related domain protein;
PFAM: PfkB domain protein; cytidylyltransferase;
KEGG: aha:AHA_3767 bifunctional heptose 7-phosphate
kinase/heptose 1-phosphate adenyltransferase"
/codon_start=1
/transl_table=11
/product="rfaE bifunctional protein"
/protein_id="YP_002891599.1"
/db_xref="GI:237807159"
/db_xref="InterPro:IPR002173"
/db_xref="InterPro:IPR004820"
/db_xref="InterPro:IPR004821"
/db_xref="InterPro:IPR006662"
/db_xref="InterPro:IPR011611"
/db_xref="InterPro:IPR011913"
/db_xref="InterPro:IPR011914"
/db_xref="GeneID:7884200"
/translation="MTMRITLPDFSAARVLVVGDIMLDRYWSGPTRRISPEAPVPVVK
VEKNEDRPGGAANVALNVAALGGKTTLLGFVGQDEAADCLEAKLASHKVSYDLVKVAE
LPTITKLRILSGNQQLIRLDFEDSFAAADPAPLLAKLDAALPDFDVLILSDYAKGALT
CVRDIIALARKHKVPVLIDPKGDSFEKYRGATLIKPNMLEFETIVGKVKNEEDLIEKA
KNLLNELDLEALLVTRSENGMLLVRRGGAVLALRTQAREVFDVTGAGDTVVGALATAL
SAGKSLEEACAIANCAAGVVVAKLGTSTVSPQELAQALHEHSSVEQAFGVMNEAELKT
AVLAARRRGEKIVMTNGCFDILHAGHVSYLKAAHKLGDRLIVAVNDDASVRRLKGEKR
PIVPEDQRMAVLAALDSVDWVVPFTEDTPQRVIAGILPDLLVKGGDYQPQDIAGYAEV
TANGGEVRVLHFEDGCSTSNIVKTIIERECK"
misc_feature 436129..437547
/locus_tag="Tola_0384"
/note="bifunctional heptose 7-phosphate kinase/heptose
