LOCUS NC_012947 4570938 bp DNA circular CON 10-JUN-2013
DEFINITION Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete
genome.
ACCESSION NC_012947
VERSION NC_012947.1 GI:253771435
DBLINK Project: 59245
BioProject: PRJNA59245
KEYWORDS .
SOURCE Escherichia coli 'BL21-Gold(DE3)pLysS AG'
ORGANISM Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Escherichia.
REFERENCE 1 (bases 1 to 4570938)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., LaButti,K.M., Clum,A.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Anderson,I., Sorek,R.
and Rubin,E.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Escherichia coli BL21-Gold(DE3)pLysS AG
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4570938)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4570938)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., LaButti,K.M., Clum,A.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Anderson,I., Sorek,R.
and Rubin,E.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP001665.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4084198
Source DNA and bacteria available from Eddy Rubin (EMRubin@lbl.gov)
Contacts: Eddy Rubin (EMRubin@lbl.gov)
David Bruce (microbe@cuba.jgi-psf.org)
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-PGF
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Escherichia coli BL21(DE3)
GOLD Stamp ID :: Gi04342
Isolation Site :: Derivative of E. coli strain B
Oxygen Requirement :: Facultative
cell Shape :: Rod-shaped
Motility :: Motile
sporulation :: Nonsporulating
Temperature Range :: Mesophile
Temperature Optimum :: 37 C
Gram Staining :: gram-
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Host, Human intestinal microflora
Phenotypes :: Non-Pathogen
##Metadata-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..4570938
/organism="Escherichia coli 'BL21-Gold(DE3)pLysS AG'"
/mol_type="genomic DNA"
/strain="Escherichia coli BL21-Gold(DE3)pLysS AG"
/db_xref="taxon:866768"
gene 347..1750
/gene="dnaA"
/locus_tag="ECBD_0001"
/db_xref="GeneID:8156697"
CDS 347..1750
/gene="dnaA"
/locus_tag="ECBD_0001"
/inference="protein motif:TFAM:TIGR00362"
/note="binds to the dnaA-box as an ATP-bound complex at
the origin of replication during the initiation of
chromosomal replication; can also affect transcription of
multiple genes including itself."
/codon_start=1
/transl_table=11
/product="chromosomal replication initiation protein"
/protein_id="YP_003034267.1"
/db_xref="GI:253771436"
/db_xref="InterPro:IPR001957"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013159"
/db_xref="InterPro:IPR013317"
/db_xref="GeneID:8156697"
/translation="MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPN
RFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVA
QTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADN
PGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNA
IEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEIN
GVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVR
ELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVA
DLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREE
SHDIKEDFSNLIRTLSS"
misc_feature 356..541
/gene="dnaA"
/locus_tag="ECBD_0001"
/note="DnaA N-terminal domain; Region: DnaA_N; pfam11638"
/db_xref="CDD:221153"
misc_feature 365..1648
/gene="dnaA"
/locus_tag="ECBD_0001"
/note="chromosomal replication initiator protein DnaA;
Region: DnaA; TIGR00362"
/db_xref="CDD:232941"
misc_feature 785..1216
/gene="dnaA"
/locus_tag="ECBD_0001"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 860..883
/gene="dnaA"
/locus_tag="ECBD_0001"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(863..886,1049..1051,1151..1153)
/gene="dnaA"
/locus_tag="ECBD_0001"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature <1028..1438
/gene="dnaA"
/locus_tag="ECBD_0001"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cl17189"
/db_xref="CDD:247743"
misc_feature 1037..1054
/gene="dnaA"
/locus_tag="ECBD_0001"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 1187..1189
/gene="dnaA"
/locus_tag="ECBD_0001"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 1472..1741
/gene="dnaA"
/locus_tag="ECBD_0001"
/note="C-terminal domain of bacterial DnaA proteins. The
DNA-binding C-terminal domain of DnaA contains a
helix-turn-helix motif that specifically interacts with
the DnaA box, a 9-mer motif that occurs repetitively in
the replication origin oriC. Multiple...; Region:
Bac_DnaA_C; cd06571"
/db_xref="CDD:119330"
misc_feature order(1541..1543,1565..1570,1589..1591,1607..1615,
1640..1654,1661..1663,1670..1675)
/gene="dnaA"
/locus_tag="ECBD_0001"
/note="DnaA box-binding interface [nucleotide binding];
other site"
/db_xref="CDD:119330"
gene 1755..2855
/locus_tag="ECBD_0002"
/db_xref="GeneID:8157826"
CDS 1755..2855
/locus_tag="ECBD_0002"
/EC_number="2.7.7.7"
/inference="protein motif:TFAM:TIGR00663"
/note="binds the polymerase to DNA and acts as a sliding
clamp"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit beta"
/protein_id="YP_003034268.1"
/db_xref="GI:253771437"
/db_xref="InterPro:IPR001001"
/db_xref="GeneID:8157826"
/translation="MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSL
TGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSG
RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
ETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQI
GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNE
KFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCE
NVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL"
misc_feature 1755..2852
/locus_tag="ECBD_0002"
/note="DNA polymerase III subunit beta; Validated; Region:
PRK05643"
/db_xref="CDD:235541"
misc_feature 1755..2849
/locus_tag="ECBD_0002"
/note="Beta clamp domain. The beta subunit (processivity
factor) of DNA polymerase III holoenzyme, refered to as
the beta clamp, forms a ring shaped dimer that encircles
dsDNA (sliding clamp) in bacteria. The beta-clamp is
structurally similar to the trimeric...; Region:
beta_clamp; cd00140"
/db_xref="CDD:238082"
misc_feature order(1824..1826,1971..1973,1992..1994,2346..2348)
/locus_tag="ECBD_0002"
/note="putative DNA binding surface [nucleotide binding];
other site"
/db_xref="CDD:238082"
misc_feature order(1974..1976,1983..1985,2061..2063,2067..2069,
2568..2570,2661..2666)
/locus_tag="ECBD_0002"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238082"
misc_feature order(2268..2270,2274..2285,2712..2714,2838..2849)
/locus_tag="ECBD_0002"
/note="beta-clamp/clamp loader binding surface; other
site"
/db_xref="CDD:238082"
misc_feature order(2268..2270,2274..2279,2493..2495,2598..2600,
2637..2642,2721..2723,2838..2849)
/locus_tag="ECBD_0002"
/note="beta-clamp/translesion DNA polymerase binding
surface; other site"
/db_xref="CDD:238082"
gene 2855..3928
/gene="recF"
/locus_tag="ECBD_0003"
/db_xref="GeneID:8157827"
CDS 2855..3928
/gene="recF"
/locus_tag="ECBD_0003"
/inference="protein motif:TFAM:TIGR00611"
/note="Required for DNA replication; binds preferentially
to single-stranded, linear DNA"
/codon_start=1
/transl_table=11
/product="recombination protein F"
/protein_id="YP_003034269.1"
/db_xref="GI:253771438"
/db_xref="InterPro:IPR001238"
/db_xref="InterPro:IPR003395"
/db_xref="GeneID:8157827"
/translation="MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIY
TLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDG
HKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQ
RNAALRQVTRYEQLRPWDKELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTF
SFQRGWEKETEYAEVLERNFERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKL
LMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISA
EHVIDMSDENSKMFTVEKGKITD"
misc_feature 2855..3919
/gene="recF"
/locus_tag="ECBD_0003"
/note="recF protein; Region: recf; TIGR00611"
/db_xref="CDD:233051"
misc_feature 2861..>3352
/gene="recF"
/locus_tag="ECBD_0003"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature 2942..2965
/gene="recF"
/locus_tag="ECBD_0003"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature order(2951..2956,2960..2968,3209..3211)
/gene="recF"
/locus_tag="ECBD_0003"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature 3200..3211
/gene="recF"
/locus_tag="ECBD_0003"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature <3533..3922
/gene="recF"
/locus_tag="ECBD_0003"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature 3659..3688
/gene="recF"
/locus_tag="ECBD_0003"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature 3746..3763
/gene="recF"
/locus_tag="ECBD_0003"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature 3770..3781
/gene="recF"
/locus_tag="ECBD_0003"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature 3839..3859
/gene="recF"
/locus_tag="ECBD_0003"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene 3957..6371
/gene="gyrB"
/locus_tag="ECBD_0004"
/db_xref="GeneID:8157828"
CDS 3957..6371
/gene="gyrB"
/locus_tag="ECBD_0004"
/EC_number="5.99.1.3"
/inference="protein motif:TFAM:TIGR01059"
/note="negatively supercoils closed circular
double-stranded DNA"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit B"
/protein_id="YP_003034270.1"
/db_xref="GI:253771439"
/db_xref="InterPro:IPR000565"
/db_xref="InterPro:IPR001241"
/db_xref="InterPro:IPR002288"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR006171"
/db_xref="InterPro:IPR011557"
/db_xref="InterPro:IPR013506"
/db_xref="GeneID:8157828"
/translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
DNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
KFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET
EKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY
EGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQR
DGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT
RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRT
LLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATL
HTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQ
TVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFI
TGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYK
GLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALK
AANIDI"
misc_feature 3957..6368
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="DNA gyrase subunit B; Provisional; Region: gyrB;
PRK14939"
/db_xref="CDD:237860"
misc_feature 4062..>4211
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature 4092..4094
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature order(4179..4181,4185..4187)
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
misc_feature 4614..5087
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
a ribosomal S5 domain 2-like fold, of the type found in
proteins of the type IIA family of DNA topoisomerases
similar to the B subunits of E. coli DNA gyrase and E.
coli Topoisomerase IV which are; Region:
TopoII_Trans_DNA_gyrase; cd00822"
/db_xref="CDD:238419"
misc_feature 4767..4769
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="anchoring element; other site"
/db_xref="CDD:238419"
misc_feature order(4941..4943,4950..4955,4959..4961)
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238419"
misc_feature order(4959..4961,4965..4967)
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238419"
misc_feature 5208..5552
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in proteins of the type IIA family of DNA topoisomerases
similar to the Escherichia coli GyrB subunit. TopoIIA
enzymes cut both strands of the...; Region:
TOPRIM_TopoIIA_GyrB; cd03366"
/db_xref="CDD:173786"
misc_feature order(5226..5231,5238..5240,5448..5450,5454..5456,
5460..5462)
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="active site"
/db_xref="CDD:173786"
misc_feature order(5226..5228,5448..5450)
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173786"
misc_feature 6141..6335
/gene="gyrB"
/locus_tag="ECBD_0004"
/note="DNA gyrase B subunit, carboxyl terminus; Region:
DNA_gyraseB_C; pfam00986"
/db_xref="CDD:201537"
gene 6611..7009
/locus_tag="ECBD_0005"
/db_xref="GeneID:8157019"
CDS 6611..7009
/locus_tag="ECBD_0005"
/inference="protein motif:PFAM:PF06078"
/note="PFAM: protein of unknown function DUF937;
KEGG: ssn:SSON_3648 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034271.1"
/db_xref="GI:253771440"
/db_xref="InterPro:IPR009282"
/db_xref="GeneID:8157019"
/translation="MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGL
GAILSTWLSNQQGNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIID
ALSPQGEVSPQANNDLLSAGMELLKGKLFR"
misc_feature 6611..7006
/locus_tag="ECBD_0005"
/note="hypothetical protein; Provisional; Region:
PRK11426"
/db_xref="CDD:183130"
gene 7124..7936
/locus_tag="ECBD_0006"
/db_xref="GeneID:8160210"
CDS 7124..7936
/locus_tag="ECBD_0006"
/inference="protein motif:TFAM:TIGR00099"
/note="YidA; catalyzes the dephosphorylation of erythrose
4-phosphate (preferred substrate), mannose 1-phosphate and
p-nitrophenyl phosphate; hydrolyzes the
alpha-D-glucose-1-phosphate but not the beta form; member
of the haloacid dehalogenase-like hydrolases superfamily
and Cof family of proteins"
/codon_start=1
/transl_table=11
/product="sugar phosphatase"
/protein_id="YP_003034272.1"
/db_xref="GI:253771441"
/db_xref="InterPro:IPR000150"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006379"
/db_xref="InterPro:IPR006380"
/db_xref="InterPro:IPR013200"
/db_xref="GeneID:8160210"
/translation="MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTG
RPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSRE
VGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEP
AILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAI
GDQENDIAMIEYAGVGVAMDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLN"
misc_feature 7124..7933
/locus_tag="ECBD_0006"
/note="sugar phosphate phosphatase; Provisional; Region:
PRK10513"
/db_xref="CDD:182509"
misc_feature 7136..>7348
/locus_tag="ECBD_0006"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature order(7148..7156,7250..7255)
/locus_tag="ECBD_0006"
/note="active site"
/db_xref="CDD:119389"
misc_feature 7148..7165
/locus_tag="ECBD_0006"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature 7250..7252
/locus_tag="ECBD_0006"
/note="motif II; other site"
/db_xref="CDD:119389"
misc_feature <7643..7834
/locus_tag="ECBD_0006"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
gene complement(7982..8638)
/locus_tag="ECBD_0007"
/db_xref="GeneID:8160211"
CDS complement(7982..8638)
/locus_tag="ECBD_0007"
/inference="similar to AA sequence:KEGG:SF3768"
/note="KEGG: sfl:SF3768 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034273.1"
/db_xref="GI:253771442"
/db_xref="GeneID:8160211"
/translation="MKLNFKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQ
SDTITGLSQAKDSNGTKGYVFVGESLDYLITDGADDIVKMLNNPALNRHNIQVADDAR
FVLNAGKKKFTGTISLYYYWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKN
MDYSKVMAFYHPFKVRFYEYYSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ
"
sig_peptide complement(8552..8638)
/locus_tag="ECBD_0007"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.998) with cleavage site probability 0.471 at
residue 29"
misc_feature complement(7985..8635)
/locus_tag="ECBD_0007"
/note="hypothetical protein; Provisional; Region:
PRK10215"
/db_xref="CDD:236663"
gene 8916..9605
/locus_tag="ECBD_0008"
/db_xref="GeneID:8160212"
CDS 8916..9605
/locus_tag="ECBD_0008"
/inference="protein motif:PFAM:PF07729"
/note="PFAM: GntR family transcriptional regulator;
regulatory protein GntR HTH;
SMART: regulatory protein GntR HTH;
KEGG: sfx:S4002 regulator protein for dgo operon"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_003034274.1"
/db_xref="GI:253771443"
/db_xref="InterPro:IPR000524"
/db_xref="InterPro:IPR011711"
/db_xref="GeneID:8160212"
/translation="MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNI
IREVFRSLMAKRLIEMKRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVR
NLVEPAIARWAAERATSSDLAQIESALNEMIANNQDREAFNEADIRYHEAVLQSVHNP
VLQQLSIAISSLQRAVFERTWMGDEANMPQTLQEHKALFDAIRHQDGDAAEQAALTMI
ASSTRRLKEIT"
misc_feature 8919..9602
/locus_tag="ECBD_0008"
/note="Transcriptional regulators [Transcription]; Region:
FadR; COG2186"
/db_xref="CDD:225097"
misc_feature 8928..9122
/locus_tag="ECBD_0008"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature order(8931..8933,9000..9002,9006..9011,9033..9047,
9051..9056,9063..9065,9093..9098,9102..9113)
/locus_tag="ECBD_0008"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature 9213..9557
/locus_tag="ECBD_0008"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:219539"
gene 9602..10480
/locus_tag="ECBD_0009"
/db_xref="GeneID:8160213"
CDS 9602..10480
/locus_tag="ECBD_0009"
/EC_number="2.7.1.58"
/inference="protein motif:PRIAM:2.7.1.58"
/note="PFAM: 2-keto-3-deoxy-galactonokinase;
KEGG: ssn:SSON_3644 2-oxo-3-deoxygalactonate kinase"
/codon_start=1
/transl_table=11
/product="2-dehydro-3-deoxygalactonokinase"
/protein_id="YP_003034275.1"
/db_xref="GI:253771444"
/db_xref="InterPro:IPR000223"
/db_xref="InterPro:IPR007729"
/db_xref="GeneID:8160213"
/translation="MTARYIAIDWGSTNLRAWLYQGDHCLESRQSEAGVTRLNGKSPA
AVLAEVTTDWREENTPVVMAGMVGSNVGWKVAPYLSVPARFSSIGEQLTSVGDNIWII
PGLCVSHDDNHNVMRGEETQLIGARALAPSSLYVMPGTHCKWVQADSQQINDFRTVMT
GELHHLLLNHSLIGAGLPPQENSADAFAAGLERGLNTPAILPQLFEVRASHVLGTLPR
EQVSEFLSGLLIGAEVASMRDYVAHQHAITLVAGTSLTARYQQAFQAMGCDVTAVAGD
TAFQAGIRSIAHAVAN"
misc_feature 9608..10477
/locus_tag="ECBD_0009"
/note="2-keto-3-deoxy-galactonokinase [Carbohydrate
transport and metabolism]; Region: DgoK; COG3734"
/db_xref="CDD:226257"
misc_feature 9626..10465
/locus_tag="ECBD_0009"
/note="2-keto-3-deoxy-galactonokinase; Region: DGOK;
pfam05035"
/db_xref="CDD:218394"
gene 10464..11081
/locus_tag="ECBD_0010"
/db_xref="GeneID:8160214"
CDS 10464..11081
/locus_tag="ECBD_0010"
/inference="protein motif:PFAM:PF01081"
/note="catalyzes the formation of D-glyceraldehyde
3-phosphate and pyruvate from
2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in
galactonate metabolism"
/codon_start=1
/transl_table=11
/product="2-dehydro-3-deoxy-6-phosphogalactonate aldolase"
/protein_id="YP_003034276.1"
/db_xref="GI:253771445"
/db_xref="InterPro:IPR000887"
/db_xref="GeneID:8160214"
/translation="MQWQTKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQ
WEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGM
TVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVTPE
NLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAVQ"
misc_feature 10464..11072
/locus_tag="ECBD_0010"
/note="2-dehydro-3-deoxy-6-phosphogalactonate aldolase;
Reviewed; Region: PRK09140"
/db_xref="CDD:181670"
misc_feature 10476..11009
/locus_tag="ECBD_0010"
/note="KDPG and KHG aldolase; Region: KDPG_aldolase;
cd00452"
/db_xref="CDD:188632"
misc_feature order(10497..10499,10572..10574,10584..10586,10659..10661,
10839..10841,10845..10847,10923..10925)
/locus_tag="ECBD_0010"
/note="active site"
/db_xref="CDD:188632"
misc_feature order(10584..10586,10659..10661,10665..10667,10722..10733,
10791..10802,10806..10808,10818..10820,10845..10850,
10881..10883,10893..10898)
/locus_tag="ECBD_0010"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:188632"
misc_feature 10839..10841
/locus_tag="ECBD_0010"
/note="catalytic residue [active]"
/db_xref="CDD:188632"
gene 11078..12226
/locus_tag="ECBD_0011"
/db_xref="GeneID:8160215"
CDS 11078..12226
/locus_tag="ECBD_0011"
/inference="protein motif:PFAM:PF01188"
/note="PFAM: mandelate racemase/muconate lactonizing
protein"
/codon_start=1
/transl_table=11
/product="galactonate dehydratase"
/protein_id="YP_003034277.1"
/db_xref="GI:253771446"
/db_xref="InterPro:IPR001354"
/db_xref="InterPro:IPR013341"
/db_xref="InterPro:IPR013342"
/db_xref="GeneID:8160215"
/translation="MKITKITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAA
VHELGDYLIGQDPSRINDLWQVMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLNAPV
WQLMGGLVRDKIKAYSWVGGDRPADVIDGIKTLREIGFDTFKLNGCEELGLIDNSRAV
DAAVNTVAQIREAFGNQIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAE
YYPKLAAQTHIPLAAGERMFSRFDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAE
AYDVTLAPHCPLGPIALAACLHIDFVSYNAVLQEQSMGIHYNKGAELLDFVKNKEDFS
MVGGFFKPLTKPGLGVEIDEAKVIEFSKNAPDWRNPLWRHEDNSVAEW"
misc_feature 11078..12223
/locus_tag="ECBD_0011"
/note="galactonate dehydratase; Provisional; Region:
PRK14017"
/db_xref="CDD:184455"
misc_feature 11081..12136
/locus_tag="ECBD_0011"
/note="D-galactonate dehydratase catalyses the dehydration
of galactonate to 2-keto-3-deoxygalactnate (KDGal), as
part of the D-galactonate nonphosphorolytic catabolic
Entner-Doudoroff pathway. D-galactonate dehydratase
belongs to the enolase superfamily of...; Region:
D-galactonate_dehydratase; cd03325"
/db_xref="CDD:239441"
misc_feature order(11426..11428,11507..11509,11513..11515,11624..11626,
11696..11698,11702..11704,11780..11782,11849..11851,
11930..11932,12005..12007)
/locus_tag="ECBD_0011"
/note="putative active site pocket [active]"
/db_xref="CDD:239441"
misc_feature order(11624..11626,11702..11704,11780..11782)
/locus_tag="ECBD_0011"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:239441"
gene 12346..13638
/locus_tag="ECBD_0012"
/db_xref="GeneID:8160216"
CDS 12346..13638
/locus_tag="ECBD_0012"
/inference="protein motif:TFAM:TIGR00893"
/note="TIGRFAM: d-galactonate transporter;
phosphoglycerate transporter;
PFAM: major facilitator superfamily MFS_1; general
substrate transporter;
KEGG: ssn:SSON_3642 D-galactonate transport"
/codon_start=1
/transl_table=11
/product="d-galactonate transporter"
/protein_id="YP_003034278.1"
/db_xref="GI:253771447"
/db_xref="InterPro:IPR000849"
/db_xref="InterPro:IPR004744"
/db_xref="InterPro:IPR005828"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8160216"
/translation="MDIPVNAAKPGRRRYLTLVMIFITVVICYVDRANLAVASAHIQE
EFGITKAEMGYVFSAFAWLYTLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFAT
GLMSLIGLRAITGIFEAPAFPTNNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLL
IWIQEMLSWHWVFIVTGGIGIIWSLIWFKVYQPPRLTKGISKAELDYIRDGGGLVDGD
APVKKEARQPLTAKDWKLVFHRKLIGVYLGQFAVASTLWFFLTWFPNYLTQEKGITAL
KAGFMTTVPFLAAFVGVLLSGWVADLLVRKGFSLGFARKTPIICGLLISTCIMGANYT
NDPMMIMCLMALAFFGNGFASITWSLVSSLAPMRLIGLTGGVFNFAGGLGGITVPLVV
GYLAQGYGFAPALVYISAVALIGALSYILLVDDVKRVG"
misc_feature 12397..13614
/locus_tag="ECBD_0012"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 12412..13614
/locus_tag="ECBD_0012"
/note="D-galactonate transporter; Region: 2A0114;
TIGR00893"
/db_xref="CDD:233174"
misc_feature order(12439..12441,12448..12456,12460..12465,12514..12516,
12523..12528,12535..12537,12547..12552,12556..12561,
12697..12702,12709..12714,12721..12726,12733..12735,
12769..12774,12781..12786,12802..12804,13102..13104,
13111..13116,13123..13128,13135..13137,13177..13179,
13189..13191,13201..13203,13210..13212,13222..13224,
13387..13389,13396..13401,13417..13422,13429..13431,
13462..13467,13474..13479,13486..13491,13498..13500)
/locus_tag="ECBD_0012"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(13635..14699)
/locus_tag="ECBD_0013"
/db_xref="GeneID:8160217"
CDS complement(13635..14699)
/locus_tag="ECBD_0013"
/inference="similar to AA sequence:KEGG:SSON_3641"
/note="FAD/NAD(P)-binding domain"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="YP_003034279.1"
/db_xref="GI:253771448"
/db_xref="InterPro:IPR003042"
/db_xref="GeneID:8160217"
/translation="MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSK
PCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHA
FDLWMKSLIPTSVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSM
VRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNSITNCYSWSISKDGYFIFGGAY
PMKDGQTRFTTLKEKMSAFQFQFGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAG
FISASSLEGISYALDSADILRAVLLKQPEKLNTAYWRATRKLRLKLFGKIVKSRCLTA
PALRKWIMRSGMAHIPQLKD"
misc_feature complement(13641..14693)
/locus_tag="ECBD_0013"
/note="putative oxidoreductase; Provisional; Region:
PRK11445"
/db_xref="CDD:183139"
misc_feature complement(<14172..>14381)
/locus_tag="ECBD_0013"
/note="hypothetical protein; Provisional; Region:
PRK07236"
/db_xref="CDD:235980"
gene 14800..16014
/locus_tag="ECBD_0014"
/db_xref="GeneID:8160218"
CDS 14800..16014
/locus_tag="ECBD_0014"
/inference="similar to AA sequence:KEGG:SSON_3640"
/note="KEGG: ssn:SSON_3640 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034280.1"
/db_xref="GI:253771449"
/db_xref="GeneID:8160218"
/translation="MKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIER
VNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIAE
GGKVSNLDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNV
GVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAF
IGDTLSPKGEKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTH
HRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQ
SAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWM
EGGQLWITETDR"
misc_feature 14983..15336
/locus_tag="ECBD_0014"
/note="Protein of unknown function (DUF3748); Region:
DUF3748; pfam12566"
/db_xref="CDD:193082"
gene complement(16016..16423)
/locus_tag="ECBD_0015"
/db_xref="GeneID:8160219"
CDS complement(16016..16423)
/locus_tag="ECBD_0015"
/inference="protein motif:PFAM:PF07119"
/note="PFAM: protein of unknown function DUF1375;
KEGG: sfv:SFV_3823 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034281.1"
/db_xref="GI:253771450"
/db_xref="InterPro:IPR010780"
/db_xref="GeneID:8160219"
/translation="MMMLFSARDRYNSSGQHPRSTDEFIMIRNVLLAFMICSGMTLLG
GCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDV
FRKDSSVRSRVEKSEANAQATNAVIPPARMPDN"
sig_peptide complement(16268..16423)
/locus_tag="ECBD_0015"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.713) with cleavage site probability 0.694 at
residue 52"
misc_feature complement(16019..16345)
/locus_tag="ECBD_0015"
/note="hypothetical protein; Provisional; Region:
PRK11616"
/db_xref="CDD:183233"
gene 16654..17067
/locus_tag="ECBD_0016"
/db_xref="GeneID:8160220"
CDS 16654..17067
/locus_tag="ECBD_0016"
/inference="protein motif:PFAM:PF00011"
/note="with IbpB associates with aggregated proteins to
stabilize and protect them from irreversible denaturation
and extensive proteolysis during heat shock and oxidative
stress"
/codon_start=1
/transl_table=11
/product="heat shock protein IbpA"
/protein_id="YP_003034282.1"
/db_xref="GI:253771451"
/db_xref="InterPro:IPR002068"
/db_xref="GeneID:8160220"
/translation="MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDE
NHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA
ENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEIN"
misc_feature 16654..17064
/locus_tag="ECBD_0016"
/note="Molecular chaperone (small heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: IbpA; COG0071"
/db_xref="CDD:223149"
misc_feature 16756..17022
/locus_tag="ECBD_0016"
/note="Alpha-crystallin domain (ACD) found in Escherichia
coli inclusion body-associated proteins IbpA and IbpB, and
similar proteins. IbpA and IbpB are 16 kDa small heat
shock proteins (sHsps). sHsps are molecular chaperones
that suppress protein aggregation...; Region:
ACD_IbpA-B_like; cd06470"
/db_xref="CDD:107227"
misc_feature order(16762..16776,16801..16803,16807..16809,16813..16818,
16942..16944,16996..17001)
/locus_tag="ECBD_0016"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:107227"
gene 17179..17607
/locus_tag="ECBD_0017"
/db_xref="GeneID:8160221"
CDS 17179..17607
/locus_tag="ECBD_0017"
/inference="protein motif:PFAM:PF00011"
/note="16 kDa heat shock protein B; associates with
aggregated proteins, together with ibpA, to stabilize and
protect them from irreversible denaturation and extensive
proteolysis during heat shock and oxidative stress;
ATP-independent"
/codon_start=1
/transl_table=11
/product="heat shock chaperone IbpB"
/protein_id="YP_003034283.1"
/db_xref="GI:253771452"
/db_xref="InterPro:IPR002068"
/db_xref="GeneID:8160221"
/translation="MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNH
YRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAEN
MEVSGATFVNGLLHIDLIRNEPEPIAAQRIAISERPALNS"
misc_feature 17179..17583
/locus_tag="ECBD_0017"
/note="Molecular chaperone (small heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: IbpA; COG0071"
/db_xref="CDD:223149"
misc_feature 17275..17541
/locus_tag="ECBD_0017"
/note="Alpha-crystallin domain (ACD) found in Escherichia
coli inclusion body-associated proteins IbpA and IbpB, and
similar proteins. IbpA and IbpB are 16 kDa small heat
shock proteins (sHsps). sHsps are molecular chaperones
that suppress protein aggregation...; Region:
ACD_IbpA-B_like; cd06470"
/db_xref="CDD:107227"
misc_feature order(17281..17295,17320..17322,17326..17328,17332..17337,
17461..17463,17515..17520)
/locus_tag="ECBD_0017"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:107227"
gene 17803..19464
/locus_tag="ECBD_0018"
/db_xref="GeneID:8160222"
CDS 17803..19464
/locus_tag="ECBD_0018"
/inference="protein motif:TFAM:TIGR01625"
/note="TIGRFAM: YidE/YbjL duplication;
PFAM: YidE/YbjL duplication domain protein; TrkA-C domain
protein;
KEGG: sfx:S3992 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034284.1"
/db_xref="GI:253771453"
/db_xref="InterPro:IPR006037"
/db_xref="InterPro:IPR006512"
/db_xref="GeneID:8160222"
/translation="MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVG
HFVSQAGMTLSSDMLHVIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVI
IGGLVTAILHKLFDIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSY
AMAYPFGICGILFTMWMLRVIFRVNVETEAQQHESSRTNGGALIRTINIRVENPNLHD
LAIKDVPILNGDKIICSRLKREETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQ
EVDTSLSTKGTDLRVERVVVTNENVLGKRIRDLHFKERYDVVISRLNRAGVELVASGD
ISLQFGDILNLVGRPSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVP
GFPAALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKS
GGDFVNTLVNGEGLSWIGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPP
ALAFANNLHPTSGAAALSYATVYPLVMFLRIITPQLLAVLFWSIG"
misc_feature 17803..19458
/locus_tag="ECBD_0018"
/note="putative transporter; Validated; Region: PRK03818"
/db_xref="CDD:179654"
misc_feature 17833..18342
/locus_tag="ECBD_0018"
/note="Predicted Permease Membrane Region; Region:
Asp-Al_Ex; pfam06826"
/db_xref="CDD:219194"
misc_feature 18436..18627
/locus_tag="ECBD_0018"
/note="TrkA-C domain; Region: TrkA_C; pfam02080"
/db_xref="CDD:216867"
misc_feature 18709..18882
/locus_tag="ECBD_0018"
/note="TrkA-C domain; Region: TrkA_C; pfam02080"
/db_xref="CDD:216867"
misc_feature 19024..19401
/locus_tag="ECBD_0018"
/note="AspT/YidE/YbjL antiporter duplication domain;
Region: YidE_YbjL_dupl; TIGR01625"
/db_xref="CDD:130686"
gene complement(19461..19946)
/locus_tag="ECBD_0019"
/pseudo
/db_xref="GeneID:8160223"
gene 20394..22010
/locus_tag="ECBD_0020"
/db_xref="GeneID:8160224"
CDS 20394..22010
/locus_tag="ECBD_0020"
/inference="protein motif:TFAM:TIGR02005"
/note="TIGRFAM: PTS system, alpha-glucoside-specific IIBC
subunit; PTS system, maltose and glucose-specific
subfamily, IIC subunit; PTS system, glucose-like IIB
subunint;
PFAM: phosphotransferase system EIIC; phosphotransferase
system PTS EIIB protein;
KEGG: ssn:SSON_3634 phosphotransferase system enzyme IIBC
component"
/codon_start=1
/transl_table=11
/product="PTS system, alpha-glucoside-specific IIBC
subunit"
/protein_id="YP_003034285.1"
/db_xref="GI:253771454"
/db_xref="InterPro:IPR001996"
/db_xref="InterPro:IPR003352"
/db_xref="InterPro:IPR004719"
/db_xref="InterPro:IPR010975"
/db_xref="InterPro:IPR011535"
/db_xref="InterPro:IPR013013"
/db_xref="GeneID:8160224"
/translation="MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTD
PNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFI
NAMGMTWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDK
KLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWV
YTFLERILIPTGLHHFIYGPFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGG
FALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMPVGITEPLEFTFLFI
SPLLFAVHAVLAASMSTVMYLFSVVGNMGGGLIDQVLPQNWIPMFSNHADMMLTQIAI
GLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQA
AGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVII
GLHVSQLREQLDSLINSHQSAENVAITEAV"
misc_feature 20397..21962
/locus_tag="ECBD_0020"
/note="PTS system, alpha-glucoside-specific IIBC
component; Region: PTS-IIBC-alpha; TIGR02005"
/db_xref="CDD:233683"
misc_feature 20571..21467
/locus_tag="ECBD_0020"
/note="PTS system, maltose and glucose-specific subfamily,
IIC component; Region: pts-Glc; TIGR00852"
/db_xref="CDD:233151"
misc_feature 21735..21962
/locus_tag="ECBD_0020"
/note="PTS_IIB, PTS system, glucose/sucrose specific IIB
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIB_glc; cd00212"
/db_xref="CDD:238130"
misc_feature 21795..21815
/locus_tag="ECBD_0020"
/note="active site turn [active]"
/db_xref="CDD:238130"
misc_feature 21798..21800
/locus_tag="ECBD_0020"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238130"
gene 22010..23332
/locus_tag="ECBD_0021"
/db_xref="GeneID:8160225"
CDS 22010..23332
/locus_tag="ECBD_0021"
/inference="protein motif:PFAM:PF02056"
/note="PFAM: glycoside hydrolase family 4;
KEGG: sdy:SDY_4168 6-phospho-beta-glucosidase"
/codon_start=1
/transl_table=11
/product="glycoside hydrolase family 4"
/protein_id="YP_003034286.1"
/db_xref="GI:253771455"
/db_xref="InterPro:IPR001088"
/db_xref="GeneID:8160225"
/translation="MTKFSVVVAGGGSTFTPGIVLMLLANQDRFPLRALKFYDNDGAR
QEVIAEACKVILKEKAPDIAFSYTTDPEVAFSDVDFVMAHIRVGKYPMRELDEKIPLR
HGVVGQETCGPGGIAYGMRSIGGVLELVDYMEKYSPNAWMLNYSNPAAIVAEATRRLR
PNAKILNICDMPIGIESRMAQIVGLQDRKQMRVRYYGLNHFGWWTSIEDLQGNDLMPQ
LRQYVSKHGYVPPQQDTHTEASWNDTYAKARDVQALAPDTLPNTYLKYYLFPDYVVQH
SNPEHTRANEVMEHREKQVFDACRAITAAGNSAAGKLEIDEHASYIVDLAAAIAFNTQ
ERMLLIVPNNGAIHNFDDEAMVEIPCLVGHNGPEPLVVGDIPQFQKGLMSQQVAVEKL
VVDAWEQRSYQHLWQAITLSKTVPSASVAKAILDELLEANKAYWPELR"
misc_feature 22010..23326
/locus_tag="ECBD_0021"
/note="Alpha-galactosidases/6-phospho-beta-glucosidases,
family 4 of glycosyl hydrolases [Carbohydrate transport
and metabolism]; Region: CelF; COG1486"
/db_xref="CDD:224403"
misc_feature 22019..23329
/locus_tag="ECBD_0021"
/note="Glycoside Hydrolases Family 4; GlvA- and pagL-like
glycosidases; Region: GH4_GlvA_pagL_like; cd05298"
/db_xref="CDD:133434"
misc_feature order(22043..22054,22124..22129,22259..22267,22277..22279,
22334..22336,22361..22363,22442..22444,22448..22450,
22511..22519,22880..22882)
/locus_tag="ECBD_0021"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:133434"
misc_feature order(22286..22288,22334..22336,22448..22450,22514..22522,
22607..22609,22796..22798,22856..22858,22880..22882)
/locus_tag="ECBD_0021"
/note="sugar binding site [chemical binding]; other site"
/db_xref="CDD:133434"
misc_feature order(22514..22516,22607..22609)
/locus_tag="ECBD_0021"
/note="divalent metal binding site [ion binding]; other
site"
/db_xref="CDD:133434"
misc_feature order(22574..22576,22583..22585,22631..22633,22643..22645,
23003..23005,23039..23041,23096..23101,23105..23107,
23111..23122)
/locus_tag="ECBD_0021"
/note="putative tetramer (dimer of dimers) interface
[polypeptide binding]; other site"
/db_xref="CDD:133434"
misc_feature order(22775..22777,22811..22813,23135..23140,23150..23152,
23159..23161,23171..23173,23180..23182,23192..23194,
23210..23212,23216..23218,23225..23230,23237..23242,
23255..23257,23261..23263,23267..23269,23273..23275)
/locus_tag="ECBD_0021"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133434"
gene complement(23329..24222)
/locus_tag="ECBD_0022"
/db_xref="GeneID:8160226"
CDS complement(23329..24222)
/locus_tag="ECBD_0022"
/inference="protein motif:PFAM:PF00165"
/note="PFAM: helix-turn-helix- domain containing protein
AraC type;
SMART: helix-turn-helix- domain containing protein AraC
type"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_003034287.1"
/db_xref="GI:253771456"
/db_xref="InterPro:IPR000005"
/db_xref="GeneID:8160226"
/translation="MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEH
YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC
EGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA
FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR
RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG
YAPSAVLKNTDQHPTDASPHN"
misc_feature complement(<23839..24030)
/locus_tag="ECBD_0022"
/note="AraC-like ligand binding domain; Region:
AraC_binding; pfam02311"
/db_xref="CDD:145456"
misc_feature complement(23527..23646)
/locus_tag="ECBD_0022"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:215763"
misc_feature complement(23380..23625)
/locus_tag="ECBD_0022"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
gene 24389..26104
/locus_tag="ECBD_0023"
/db_xref="GeneID:8160227"
CDS 24389..26104
/locus_tag="ECBD_0023"
/inference="protein motif:TFAM:TIGR00813"
/note="uncharacterized member of the SSS superfamily of
sodium-dependent solute transporters; unknown function"
/codon_start=1
/transl_table=11
/product="symporter YidK"
/protein_id="YP_003034288.1"
/db_xref="GI:253771457"
/db_xref="InterPro:IPR001734"
/db_xref="GeneID:8160227"
/translation="MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKA
PVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGI
ATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFM
QGIEQLTTVHAEKLNSIGGPTDPLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLA
EGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTLVNNVLPVPMVGFFG
AVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLV
APWIANAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITI
NYLVKFDFHFLYVLACTFCINVVVMLVIGFIKPRATPFTFKDAFAVDMKPWKNVKIAS
IGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPAVTFTPD
GKDSL"
misc_feature 24398..25957
/locus_tag="ECBD_0023"
/note="putative transporter; Provisional; Region:
PRK10484"
/db_xref="CDD:236699"
misc_feature 24413..25825
/locus_tag="ECBD_0023"
/note="uncharacterized SLC5 subfamily, Escherichia coli
YidK-like; solute binding domain; Region: SLC5sbd_YidK;
cd10328"
/db_xref="CDD:212038"
misc_feature order(24545..24547,24554..24556,25406..25408,25415..25420)
/locus_tag="ECBD_0023"
/note="Na binding site [ion binding]; other site"
/db_xref="CDD:212038"
gene 26101..27594
/locus_tag="ECBD_0024"
/db_xref="GeneID:8160228"
CDS 26101..27594
/locus_tag="ECBD_0024"
/inference="protein motif:PFAM:PF00884"
/note="PFAM: sulfatase"
/codon_start=1
/transl_table=11
/product="sulfatase"
/protein_id="YP_003034289.1"
/db_xref="GI:253771458"
/db_xref="InterPro:IPR000917"
/db_xref="GeneID:8160228"
/translation="MKRPNFLFVMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNS
AYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWH
LDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETF
TWAHRISNRAVDFLQQPARADEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYELGEKA
QDDLANKPEHHRLWAQAMPSPVGDDGLYHHPLYFACNDFVDDQIGRVINALTPEQREN
TWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPT
MMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLV
LNLFTSDELYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLR
PWRKDARPRWMGAFRPRPQDGYSPVVRDYDTGLPTQGVKVEEKKQKF"
misc_feature 26104..27414
/locus_tag="ECBD_0024"
/note="Arylsulfatase A and related enzymes [Inorganic ion
transport and metabolism]; Region: AslA; COG3119"
/db_xref="CDD:225661"
misc_feature 26110..27180
/locus_tag="ECBD_0024"
/note="Sulfatase; Region: Sulfatase; pfam00884"
/db_xref="CDD:216172"
gene complement(27641..28090)
/locus_tag="ECBD_0025"
/db_xref="GeneID:8160229"
CDS complement(27641..28090)
/locus_tag="ECBD_0025"
/inference="similar to AA sequence:KEGG:SSON_3631"
/note="KEGG: ssn:SSON_3631 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034290.1"
/db_xref="GI:253771459"
/db_xref="GeneID:8160229"
/translation="MGIIAQNKISSLGMLFGAIALMMGIIHFSFGPFSAPPPTFESIV
ADKTAEIKRGLLAGIKGEKITTVEKKEDVDVDKILNQSGIALAIAALLCAFIGGMRKE
NRWGIRGALVFGGGTLAFHTLLFGIGIVCSILLIFLIFSFLTGGSLV"
sig_peptide complement(27986..28090)
/locus_tag="ECBD_0025"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.995) with cleavage site probability 0.986 at
residue 35"
gene 28199..28546
/locus_tag="ECBD_0026"
/db_xref="GeneID:8160230"
CDS 28199..28546
/locus_tag="ECBD_0026"
/inference="protein motif:PFAM:PF02656"
/note="PFAM: protein of unknown function DUF202;
KEGG: sdy:SDY_4160 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034291.1"
/db_xref="GI:253771460"
/db_xref="InterPro:IPR003807"
/db_xref="GeneID:8160230"
/translation="MNISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAP
DFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMV
VAVIVMGLVLYAG"
misc_feature 28199..>28471
/locus_tag="ECBD_0026"
/note="Predicted membrane protein [Function unknown];
Region: COG2149"
/db_xref="CDD:225060"
gene 28536..28898
/locus_tag="ECBD_0027"
/db_xref="GeneID:8160231"
CDS 28536..28898
/locus_tag="ECBD_0027"
/inference="similar to AA sequence:KEGG:SFV_3835"
/note="KEGG: sfv:SFV_3835 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034292.1"
/db_xref="GI:253771461"
/db_xref="GeneID:8160231"
/translation="MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWH
QAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAI
LFAVTHIHQLIVFIERVA"
misc_feature 28569..28748
/locus_tag="ECBD_0027"
/note="Domain of unknown function (DUF202); Region:
DUF202; pfam02656"
/db_xref="CDD:217167"
gene 28895..29392
/locus_tag="ECBD_0028"
/db_xref="GeneID:8160232"
CDS 28895..29392
/locus_tag="ECBD_0028"
/inference="similar to AA sequence:KEGG:SFV_3836"
/note="KEGG: sfv:SFV_3836 transcriptional regulator"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_003034293.1"
/db_xref="GI:253771462"
/db_xref="GeneID:8160232"
/translation="MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLI
PYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADISRISIELFDATLQKWCGSENP
QPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMEL
MTMLR"
misc_feature <28943..29344
/locus_tag="ECBD_0028"
/note="anaerobic sulfatase-maturating enzyme; Region:
sulfatase_rSAM; TIGR03942"
/db_xref="CDD:188457"
gene complement(29400..30584)
/gene="emrD"
/locus_tag="ECBD_0029"
/db_xref="GeneID:8160233"
CDS complement(29400..30584)
/gene="emrD"
/locus_tag="ECBD_0029"
/inference="protein motif:TFAM:TIGR00880"
/note="multidrug efflux protein involved in adaptation to
low energy shock"
/codon_start=1
/transl_table=11
/product="multidrug resistance protein D"
/protein_id="YP_003034294.1"
/db_xref="GI:253771463"
/db_xref="InterPro:IPR004734"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8160233"
/translation="MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGA
VQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAA
SAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWN
WRACYLFLLVLCAGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIG
GLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ
SVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGT
AGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPLATRMSHQGQ
PV"
misc_feature complement(29403..30584)
/gene="emrD"
/locus_tag="ECBD_0029"
/note="multidrug resistance protein D; Provisional;
Region: emrD; PRK11652"
/db_xref="CDD:183259"
sig_peptide complement(30513..30584)
/gene="emrD"
/locus_tag="ECBD_0029"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.994 at
residue 24"
misc_feature complement(<29673..30521)
/gene="emrD"
/locus_tag="ECBD_0029"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(29805..29807,29817..29819,29826..29828,
29838..29840,29850..29852,29892..29894,29943..29948,
29955..29960,29967..29969,30150..30152,30168..30173,
30180..30185,30219..30221,30228..30233,30240..30245,
30252..30257,30393..30398,30402..30407,30417..30419,
30426..30431,30438..30440,30489..30494,30498..30506,
30513..30515))
/gene="emrD"
/locus_tag="ECBD_0029"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 30741..30989
/locus_tag="ECBD_0030"
/db_xref="GeneID:8160234"
CDS 30741..30989
/locus_tag="ECBD_0030"
/inference="similar to AA sequence:KEGG:SbBS512_E4246"
/note="KEGG: sbc:SbBS512_E4246 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034295.1"
/db_xref="GI:253771464"
/db_xref="GeneID:8160234"
/translation="MLPGEMVGRIRCVSIASDTNPHAKYKRGAVSRSPLVRLESELLQ
VFQNSIKQLQCCNNEFEDKNGDIHQAHTRLLWFRSTAS"
gene complement(31241..31723)
/locus_tag="ECBD_0031"
/db_xref="GeneID:8160235"
CDS complement(31241..31723)
/locus_tag="ECBD_0031"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: ses:SARI_03851 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034296.1"
/db_xref="GI:253771465"
/db_xref="GeneID:8160235"
/translation="MLQSFSSGPTFREVLKRKTPPGLRRRGFGIVCCSSPYGALPTTT
TTRTTTTAADGAVGSSFALSMEVVIGDLVGFVFNNIYTSTALQGRQWKIFQQGKIEGL
ITFCTELQITKNPAGARFRQSPAAGNRKAHCIMSTLKVYVFRAERAISARILTYLVHS
"
gene 31722..33410
/locus_tag="ECBD_0032"
/db_xref="GeneID:8160236"
CDS 31722..33410
/locus_tag="ECBD_0032"
/inference="protein motif:TFAM:TIGR00118"
/note="TIGRFAM: acetolactate synthase, large subunit,
biosynthetic type;
PFAM: thiamine pyrophosphate protein TPP binding domain
protein; thiamine pyrophosphate protein central region;
thiamine pyrophosphate protein domain protein TPP-binding;
KEGG: elf:LF82_1102 acetolactate synthase isozyme I large
subunit"
/codon_start=1
/transl_table=11
/product="acetolactate synthase catalytic subunit"
/protein_id="YP_003034297.1"
/db_xref="GI:253771466"
/db_xref="InterPro:IPR000399"
/db_xref="InterPro:IPR011766"
/db_xref="InterPro:IPR012000"
/db_xref="InterPro:IPR012001"
/db_xref="InterPro:IPR012846"
/db_xref="GeneID:8160236"
/translation="MASSGTTSTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYD
ALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDS
IPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQS
GRPGPVWIDIPKDVQTAVFEIETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYL
GGGVINAPARVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEA
DLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQL
IPLVEAQPRAEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVG
QHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMN
IQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQGVFAATYPGKINFMQIAAGFG
LETCDLNNEADPQASLQEIINRPGPALIHVRIDAEEKVYPMVPPGAANTEMVGE"
misc_feature 31722..33407
/locus_tag="ECBD_0032"
/note="acetolactate synthase catalytic subunit; Validated;
Region: PRK08155"
/db_xref="CDD:181257"
misc_feature 31770..32237
/locus_tag="ECBD_0032"
/note="Pyrimidine (PYR) binding domain of POX and related
proteins; Region: TPP_PYR_POX_like; cd07035"
/db_xref="CDD:132918"
misc_feature order(31809..31811,31824..31829,31839..31841,31851..31853,
31878..31898,31905..31907,31914..31919,31926..31931,
31935..31943,31977..31979,31998..32000,32010..32012,
32019..32024)
/locus_tag="ECBD_0032"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132918"
misc_feature order(31824..31832,31839..31841,31851..31853,31881..31883,
31887..31898,31902..31904,31977..31979,31986..31991,
31995..32000,32007..32009,32109..32111,32118..32120)
/locus_tag="ECBD_0032"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132918"
misc_feature order(31824..31826,31899..31901,31977..31979,31989..31991)
/locus_tag="ECBD_0032"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132918"
misc_feature 32322..32723
/locus_tag="ECBD_0032"
/note="Thiamine pyrophosphate enzyme, central domain;
Region: TPP_enzyme_M; pfam00205"
/db_xref="CDD:215786"
misc_feature 32823..33380
/locus_tag="ECBD_0032"
/note="Thiamine pyrophosphate (TPP) family,
Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding
module; composed of proteins similar to the large
catalytic subunit of AHAS. AHAS catalyzes the condensation
of two molecules of pyruvate to give the...; Region:
TPP_AHAS; cd02015"
/db_xref="CDD:238973"
misc_feature order(32892..32903,32970..32972,32976..32978,33051..33059,
33066..33068,33132..33134)
/locus_tag="ECBD_0032"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:238973"
misc_feature order(32961..32963,32970..32972,32976..32978,33063..33068,
33072..33077,33096..33098,33213..33218,33228..33230,
33237..33239)
/locus_tag="ECBD_0032"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238973"
gene 33414..33704
/locus_tag="ECBD_0033"
/db_xref="GeneID:8160237"
CDS 33414..33704
/locus_tag="ECBD_0033"
/EC_number="2.2.1.6"
/inference="protein motif:TFAM:TIGR00119"
/note="with IlvB catalyzes the formation of 2-acetolactate
from pyruvate, the small subunit is required for full
activity and valine sensitivity; E.coli produces 3
isoenzymes of acetolactate synthase which differ in
specificity to substrates, valine sensitivity and affinity
for cofactors; also known as acetolactate synthase small
subunit"
/codon_start=1
/transl_table=11
/product="acetolactate synthase 1 regulatory subunit"
/protein_id="YP_003034298.1"
/db_xref="GI:253771467"
/db_xref="InterPro:IPR002912"
/db_xref="InterPro:IPR004789"
/db_xref="GeneID:8160237"
/translation="MQNTTHDNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPI
QDSDKSHIWLLVNDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ"
misc_feature 33426..>33698
/locus_tag="ECBD_0033"
/note="Acetolactate synthase, small (regulatory) subunit
[Amino acid transport and metabolism]; Region: IlvH;
COG0440"
/db_xref="CDD:223517"
misc_feature 33441..33650
/locus_tag="ECBD_0033"
/note="N-terminal ACT domain of the Escherichia coli
IlvH-like regulatory subunit of acetohydroxyacid synthase
(AHAS); Region: ACT_AHAS; cd04878"
/db_xref="CDD:153150"
misc_feature order(33456..33458,33462..33464,33477..33479,33516..33521,
33534..33536,33561..33563)
/locus_tag="ECBD_0033"
/note="putative valine binding site [chemical binding];
other site"
/db_xref="CDD:153150"
misc_feature order(33468..33473,33480..33482,33501..33503,33510..33512,
33522..33536,33564..33566)
/locus_tag="ECBD_0033"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153150"
gene 33779..34369
/locus_tag="ECBD_0034"
/db_xref="GeneID:8160238"
CDS 33779..34369
/locus_tag="ECBD_0034"
/inference="protein motif:PFAM:PF00072"
/note="response regulator in two-component regulatory
system wtih UhpB; phosphorylated UhpA is a positive
activator uhpT, a hexose phosphates transporter"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator UhpA"
/protein_id="YP_003034299.1"
/db_xref="GI:253771468"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:8160238"
/translation="MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP
GRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKR
CSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW"
misc_feature 33779..34366
/locus_tag="ECBD_0034"
/note="DNA-binding transcriptional activator UhpA;
Provisional; Region: PRK10360"
/db_xref="CDD:182408"
misc_feature 33794..34126
/locus_tag="ECBD_0034"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature order(33800..33805,33938..33940,33962..33964,34013..34015,
34070..34072,34079..34084)
/locus_tag="ECBD_0034"
/note="active site"
/db_xref="CDD:238088"
misc_feature 33938..33940
/locus_tag="ECBD_0034"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature order(33947..33952,33956..33964)
/locus_tag="ECBD_0034"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature 34079..34087
/locus_tag="ECBD_0034"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature 34190..34360
/locus_tag="ECBD_0034"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(34193..34201,34238..34246,34268..34273,34277..34282,
34286..34300,34331..34333)
/locus_tag="ECBD_0034"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(34226..34228,34232..34234,34238..34240,34331..34339,
34346..34348,34355..34360)
/locus_tag="ECBD_0034"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene 34369..35871
/locus_tag="ECBD_0035"
/db_xref="GeneID:8160239"
CDS 34369..35871
/locus_tag="ECBD_0035"
/EC_number="2.7.13.3"
/inference="protein motif:PRIAM:2.7.13.3"
/note="Member of the two-component regulatory system
UhpB/UhpA involved in the regulation of the uptake of
hexose ph"
/codon_start=1
/transl_table=11
/product="sensory histidine kinase UhpB"
/protein_id="YP_003034300.1"
/db_xref="GI:253771469"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR007895"
/db_xref="InterPro:IPR011712"
/db_xref="GeneID:8160239"
/translation="MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFP
FGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISR
YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH
YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP
IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRL
RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA
ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG
IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE
DDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV"
sig_peptide 34369..34467
/locus_tag="ECBD_0035"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.926) with cleavage site probability 0.611 at
residue 33"
misc_feature 34378..35862
/locus_tag="ECBD_0035"
/note="sensory histidine kinase UhpB; Provisional; Region:
PRK11644"
/db_xref="CDD:236945"
misc_feature 34396..35124
/locus_tag="ECBD_0035"
/note="MASE1; Region: MASE1; pfam05231"
/db_xref="CDD:218514"
misc_feature 35281..35442
/locus_tag="ECBD_0035"
/note="Histidine kinase; Region: HisKA_3; pfam07730"
/db_xref="CDD:219540"
gene 35881..37200
/locus_tag="ECBD_0036"
/db_xref="GeneID:8160240"
CDS 35881..37200
/locus_tag="ECBD_0036"
/inference="protein motif:TFAM:TIGR00881"
/note="membrane protein regulates uhpT expression"
/codon_start=1
/transl_table=11
/product="regulatory protein UhpC"
/protein_id="YP_003034301.1"
/db_xref="GI:253771470"
/db_xref="InterPro:IPR000849"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8160240"
/translation="MLPFLKAPADAPLMTDKYEIDARYRYWRRHILLTIWLGYALFYF
TRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL
IATGIINILFGFSTSLWAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWN
TAHNVGGALIPIVMAAAALHYGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVG
EWRHDALEIAQQQEGAGLTRKEILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLY
MSETLGVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG
SLWLMPFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG
ASLAGWPLAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQTPREA"
misc_feature 35902..37197
/locus_tag="ECBD_0036"
/note="regulatory protein UhpC; Provisional; Region:
PRK11663"
/db_xref="CDD:183266"
misc_feature 35974..37125
/locus_tag="ECBD_0036"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(36016..36018,36025..36033,36037..36042,36091..36093,
36100..36105,36112..36114,36124..36129,36133..36138,
36274..36279,36286..36291,36298..36303,36310..36312,
36346..36351,36358..36363,36379..36381,36667..36669,
36676..36681,36688..36693,36700..36702,36742..36744,
36754..36756,36766..36768,36775..36777,36787..36789,
36943..36945,36952..36957,36964..36966,36976..36981,
36988..36990,37021..37026,37033..37038,37045..37050,
37057..37059)
/locus_tag="ECBD_0036"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 37338..38729
/gene="uhpT"
/locus_tag="ECBD_0037"
/db_xref="GeneID:8160241"
CDS 37338..38729
/gene="uhpT"
/locus_tag="ECBD_0037"
/inference="protein motif:TFAM:TIGR00881"
/note="cytoplasmic membrane protein that functions as a
monomer; catalyzes the active transport of
sugar-phosphates such as glucose-6-phosphate with the
obligatory exchange of inorganic phosphate or
organophosphate"
/codon_start=1
/transl_table=11
/product="sugar phosphate antiporter"
/protein_id="YP_003034302.1"
/db_xref="GI:253771471"
/db_xref="InterPro:IPR000849"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8160241"
/translation="MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYL
IRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFML
ILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF
LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPE
SYGLGKAEELFGEEISEEDKETESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRI
GIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSDLANGRRGLVACIAL
ALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKG
TFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERK
IRREKKIQQLTVA"
misc_feature 37341..38717
/gene="uhpT"
/locus_tag="ECBD_0037"
/note="sugar phosphate antiporter; Reviewed; Region: uhpT;
PRK09556"
/db_xref="CDD:236564"
misc_feature 37434..38669
/gene="uhpT"
/locus_tag="ECBD_0037"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(37473..37475,37482..37490,37494..37499,37548..37550,
37557..37562,37569..37571,37581..37586,37590..37595,
37746..37751,37758..37763,37770..37775,37782..37784,
37818..37823,37830..37835,37851..37853,38151..38153,
38160..38165,38172..38177,38184..38186,38226..38228,
38238..38240,38250..38252,38259..38261,38271..38273,
38418..38420,38427..38432,38439..38441,38451..38456,
38463..38465,38496..38501,38508..38513,38520..38525,
38532..38534)
/gene="uhpT"
/locus_tag="ECBD_0037"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(38775..40541)
/locus_tag="ECBD_0038"
/db_xref="GeneID:8160242"
CDS complement(38775..40541)
/locus_tag="ECBD_0038"
/EC_number="3.5.4.2"
/inference="protein motif:TFAM:TIGR01178"
/note="catalyzes the formation of hypoxanthine from
adenine; in E. coli this activity has been detected in
mutant strains but not in wild type"
/codon_start=1
/transl_table=11
/product="cryptic adenine deaminase"
/protein_id="YP_003034303.1"
/db_xref="GI:253771472"
/db_xref="InterPro:IPR006679"
/db_xref="InterPro:IPR006680"
/db_xref="GeneID:8160242"
/translation="MNNSINHKFHHISRAEYQELLAVSRGDAVADYIIDNVSILDLIN
GGEISGPIVIKGRYIAGVGAEYTDAPALQRIDARGATAVPGFIDAHLHIESSMMTPVT
FETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCD
VNGASFTLEQMLAWRDHPQVTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGL
GGKELNAYITAGIENCHESYQLEEGRRKLQLGMSLMIREGSAARNLNALAPLINEFNS
PQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGL
LAPGKQADIVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQSAPPYGNTIARQP
VSASDFALQFTPGKRYRVIDVIHNELITHSHSSVYSENGFDRDDVSFIAVLERYGQRL
APACGLLGGFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVNQVIQDGGGLCVVRNG
QVQSHLPLPIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLSLPVIPAL
KLTSQGLFDGEKFAFTTLEVTE"
misc_feature complement(38778..40541)
/locus_tag="ECBD_0038"
/note="cryptic adenine deaminase; Provisional; Region:
PRK10027"
/db_xref="CDD:182201"
misc_feature complement(<40266..40448)
/locus_tag="ECBD_0038"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have a...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:241750"
misc_feature complement(<39459..40316)
/locus_tag="ECBD_0038"
/note="Adenine deaminase (AdeC) directly deaminates
adenine to form hypoxanthine. This reaction is part of one
of the adenine salvage pathways, as well as the
degradation pathway. It is important for adenine
utilization as a purine, as well as a nitrogen source...;
Region: AdeC; cd01295"
/db_xref="CDD:238620"
misc_feature complement(order(39690..39692,39837..39839,39900..39902,
40266..40268,40272..40274))
/locus_tag="ECBD_0038"
/note="active site"
/db_xref="CDD:238620"
misc_feature complement(38799..39296)
/locus_tag="ECBD_0038"
/note="Adenine deaminase C-terminal domain; Region:
Adenine_deam_C; pfam13382"
/db_xref="CDD:222089"
gene 40716..42050
/locus_tag="ECBD_0039"
/db_xref="GeneID:8160243"
CDS 40716..42050
/locus_tag="ECBD_0039"
/inference="protein motif:PFAM:PF00860"
/note="PFAM: xanthine/uracil/vitamin C permease; sulfate
transporter;
KEGG: sbc:SbBS512_E4255 inorganic anion transporter
sulfate permease (SulP) family"
/codon_start=1
/transl_table=11
/product="xanthine/uracil/vitamin C permease"
/protein_id="YP_003034304.1"
/db_xref="GI:253771473"
/db_xref="InterPro:IPR006043"
/db_xref="InterPro:IPR011547"
/db_xref="GeneID:8160243"
/translation="MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMV
YIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSISMGIFANLPVALAPAMGLNAFFAFV
VVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALM
GLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCC
GLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGV
TDKAGLIDGNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTA
VVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITT
VMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD"
misc_feature 40752..41987
/locus_tag="ECBD_0039"
/note="Xanthine/uracil/vitamin C permease [Nucleotide
transport and metabolism]; Region: COG2252"
/db_xref="CDD:225161"
gene 42103..42555
/locus_tag="ECBD_0040"
/db_xref="GeneID:8160244"
CDS 42103..42555
/locus_tag="ECBD_0040"
/inference="protein motif:PFAM:PF06711"
/note="PFAM: protein of unknown function DUF1198;
KEGG: sdy:SDY_4144 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034305.1"
/db_xref="GI:253771474"
/db_xref="InterPro:IPR009587"
/db_xref="GeneID:8160244"
/translation="MIWIMLATLAVVFVVGFRVLTSGARKAIRRLSDRLNIDVIPVES
MVDQMGKSAGDEFLRYLHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKAR
LAAPITDAQVRLALGFLRETEPEMQDINAFQMRYNAFFQPAEGVHWLH"
misc_feature 42103..42546
/locus_tag="ECBD_0040"
/note="Protein of unknown function (DUF1198); Region:
DUF1198; pfam06711"
/db_xref="CDD:148359"
sig_peptide 42103..42168
/locus_tag="ECBD_0040"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.670) with cleavage site probability 0.403 at
residue 22"
gene 42766..43956
/gene="nepI"
/locus_tag="ECBD_0041"
/db_xref="GeneID:8160245"
CDS 42766..43956
/gene="nepI"
/locus_tag="ECBD_0041"
/inference="protein motif:PFAM:PF07690"
/note="experimental results in Escherichia coli suggest
that this gene encodes an inosine export protein; member
of major facilitator superfamily; MFS"
/codon_start=1
/transl_table=11
/product="ribonucleoside transporter"
/protein_id="YP_003034306.1"
/db_xref="GI:253771475"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8160245"
/translation="MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLT
PMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLV
SFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA
APLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGV
MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFIL
KRSVKLALAGAPLILAVSALVLTLWGSDKIIATGVAIIWGLTFALVPVGWSTWITRSL
ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVK
MKKS"
misc_feature 42766..43866
/gene="nepI"
/locus_tag="ECBD_0041"
/note="ribonucleoside transporter; Reviewed; Region: nepI;
PRK10213"
/db_xref="CDD:182309"
misc_feature 42829..43866
/gene="nepI"
/locus_tag="ECBD_0041"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(42871..42873,42880..42888,42892..42897,42946..42948,
42955..42960,42967..42969,42979..42984,42988..42993,
43129..43134,43141..43146,43153..43158,43165..43167,
43201..43206,43213..43218,43234..43236,43450..43452,
43459..43464,43471..43476,43483..43485,43525..43527,
43537..43539,43549..43551,43558..43560,43570..43572,
43708..43710,43717..43722,43729..43731,43741..43746,
43753..43755,43786..43791,43798..43803,43810..43815,
43822..43824)
/gene="nepI"
/locus_tag="ECBD_0041"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(43997..44290)
/locus_tag="ECBD_0042"
/db_xref="GeneID:8160246"
CDS complement(43997..44290)
/locus_tag="ECBD_0042"
/inference="similar to AA sequence:KEGG:SBO_3710"
/note="KEGG: sbo:SBO_3710 transporter"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="YP_003034307.1"
/db_xref="GI:253771476"
/db_xref="GeneID:8160246"
/translation="MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKI
CTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM"
sig_peptide complement(44225..44290)
/locus_tag="ECBD_0042"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.999 at
residue 22"
misc_feature complement(<44048..44281)
/locus_tag="ECBD_0042"
/note="methyl-accepting chemotaxis protein I; Provisional;
Region: PRK15041"
/db_xref="CDD:185001"
gene complement(44295..44414)
/locus_tag="ECBD_0043"
/db_xref="GeneID:8160247"
CDS complement(44295..44414)
/locus_tag="ECBD_0043"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034308.1"
/db_xref="GI:253771477"
/db_xref="GeneID:8160247"
/translation="MEYKVWHFLLTTQARFVQHDESDESKLHLCFIRYTFVKG"
gene 44512..45330
/locus_tag="ECBD_0044"
/db_xref="GeneID:8160248"
CDS 44512..45330
/locus_tag="ECBD_0044"
/inference="protein motif:TFAM:TIGR00363"
/note="TIGRFAM: lipoprotein, YaeC family;
PFAM: NLPA lipoprotein;
KEGG: sdy:SDY_4499 cytoplasmic membrane lipoprotein-28"
/codon_start=1
/transl_table=11
/product="cytoplasmic membrane lipoprotein-28"
/protein_id="YP_003034309.1"
/db_xref="GI:253771478"
/db_xref="InterPro:IPR004478"
/db_xref="InterPro:IPR004872"
/db_xref="GeneID:8160248"
/translation="MKLTTHHLRTGAALLLAGILLAGCDQSISDAKHIKVGVINGAEQ
DVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGY
KLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKE
GKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDS
VFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW"
sig_peptide 44512..44595
/locus_tag="ECBD_0044"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.931) with cleavage site probability 0.461 at
residue 28"
misc_feature 44581..45327
/locus_tag="ECBD_0044"
/note="cytoplasmic membrane lipoprotein-28; Provisional;
Region: PRK09861"
/db_xref="CDD:182119"
misc_feature 44581..45327
/locus_tag="ECBD_0044"
/note="lipoprotein, YaeC family; Region: TIGR00363"
/db_xref="CDD:129460"
gene complement(45334..46257)
/locus_tag="ECBD_0045"
/db_xref="GeneID:8160249"
CDS complement(45334..46257)
/locus_tag="ECBD_0045"
/inference="protein motif:TFAM:TIGR00950"
/note="TIGRFAM: carboxylate/amino acid/amine transporter;
PFAM: protein of unknown function DUF6 transmembrane;
KEGG: elf:LF82_3359 uncharacterized inner membrane
transporter YicL"
/codon_start=1
/transl_table=11
/product="carboxylate/amino acid/amine transporter"
/protein_id="YP_003034310.1"
/db_xref="GI:253771479"
/db_xref="InterPro:IPR000620"
/db_xref="InterPro:IPR004779"
/db_xref="GeneID:8160249"
/translation="MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRL
IFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATA
TVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALF
WGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLI
LAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDW
LGTLLILSSVILISMDSRRRARKINRPARHE"
sig_peptide complement(46180..46257)
/locus_tag="ECBD_0045"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.969) with cleavage site probability 0.957 at
residue 26"
misc_feature complement(45823..46212)
/locus_tag="ECBD_0045"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:216178"
misc_feature complement(45421..46206)
/locus_tag="ECBD_0045"
/note="Carboxylate/Amino Acid/Amine Transporter; Region:
2A78; TIGR00950"
/db_xref="CDD:233205"
misc_feature complement(45421..45744)
/locus_tag="ECBD_0045"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:216178"
gene complement(46368..47552)
/locus_tag="ECBD_0046"
/db_xref="GeneID:8160250"
CDS complement(46368..47552)
/locus_tag="ECBD_0046"
/inference="protein motif:TFAM:TIGR00899"
/note="TIGRFAM: sugar efflux transporter;
PFAM: major facilitator superfamily MFS_1"
/codon_start=1
/transl_table=11
/product="sugar efflux transporter"
/protein_id="YP_003034311.1"
/db_xref="GI:253771480"
/db_xref="InterPro:IPR004750"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8160250"
/translation="MQKTATTPSKILDLTAAAFLLVAFLTGIAGALQTPTLSIFLADE
LKARPIMVGFFFTGSAIMGILVSQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNR
NYFILLSTGVLLSSFASTANPQMFALAREHADRTGRETVMFSTFLRAQISLAWVIGPP
LAYELAMGFSFKVMYLTAAIAFVVCGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRD
TRLLFVVCSMMWAANNLYMINMPLFIIDELHLTDKLAGEMIGIAAGLEIPMMLIAGYY
MKRIGKRLLMLIAIVSGMCFYASVLMATTPAVELELQILNAIFLGILCGIGMLYFQDL
MPEKIGSATTLYANTSRVGWIIAGSVDGIMVEIWSYHALFWLAIGMLGIAMICLLFIK
DI"
sig_peptide complement(47457..47552)
/locus_tag="ECBD_0046"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.943 at
residue 32"
misc_feature complement(46374..47474)
/locus_tag="ECBD_0046"
/note="sugar efflux transporter; Region: 2A0120;
TIGR00899"
/db_xref="CDD:129977"
misc_feature complement(46377..47435)
/locus_tag="ECBD_0046"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(46491..46493,46500..46505,46512..46517,
46524..46529,46557..46559,46566..46571,46581..46583,
46590..46595,46602..46604,46743..46745,46755..46757,
46764..46766,46776..46778,46788..46790,46830..46832,
46839..46844,46851..46856,46863..46865,47088..47090,
47106..47111,47118..47120,47127..47129,47163..47165,
47172..47177,47184..47189,47196..47201,47340..47345,
47349..47354,47364..47366,47373..47378,47385..47387))
/locus_tag="ECBD_0046"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(47934..48080)
/locus_tag="ECBD_0047"
/db_xref="GeneID:8160251"
CDS complement(47934..48080)
/locus_tag="ECBD_0047"
/inference="similar to AA sequence:KEGG:YPTS_4098"
/note="KEGG: ypb:YPTS_4098 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034312.1"
/db_xref="GI:253771481"
/db_xref="GeneID:8160251"
/translation="MDDERLKNPPVGSSVLERIRDIHASMRRVYLQVICPPADSQPTV
SPLR"
misc_feature complement(<47982..>48080)
/locus_tag="ECBD_0047"
/note="Virulence protein RhuM family; Region:
Virulence_RhuM; pfam13310"
/db_xref="CDD:222039"
gene complement(48342..49187)
/locus_tag="ECBD_0048"
/db_xref="GeneID:8160252"
CDS complement(48342..49187)
/locus_tag="ECBD_0048"
/inference="similar to AA sequence:KEGG:SeHA_C4673"
/note="KEGG: seh:SeHA_C4673 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034313.1"
/db_xref="GI:253771482"
/db_xref="GeneID:8160252"
/translation="MSNITISHPEVVTGNTDVICSTSIRHVVTVRNAALQQTETLIRQ
LTEISVLTKSIGGKSARDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRS
GMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLS
WNYKNNSPCKFGSKIIVNNLVRWDRWGFHLNNGPQADRLADLERMLHLFSGKPIPDNR
ENITIHLNEHIRSVQGKECYEDEMFSIRYFKKGSAHITFRKPELVDRLNDIIARHYPE
MLPSQ"
misc_feature complement(48354..48935)
/locus_tag="ECBD_0048"
/note="Methyltransferase domain; Region: Methyltransf_27;
pfam13708"
/db_xref="CDD:222332"
gene complement(49272..49469)
/locus_tag="ECBD_0049"
/db_xref="GeneID:8160253"
CDS complement(49272..49469)
/locus_tag="ECBD_0049"
/inference="protein motif:PFAM:PF06117"
/note="PFAM: protein of unknown function DUF957;
KEGG: sfl:SF3001 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034314.1"
/db_xref="GI:253771483"
/db_xref="InterPro:IPR009301"
/db_xref="GeneID:8160253"
/translation="MKSLTTETALDILIAWLQDNIDCESGIIFDNDEDKTDSAALLPC
IEQAREDIHTLRQLQLLQQNR"
misc_feature complement(49308..49469)
/locus_tag="ECBD_0049"
/note="Enterobacterial protein of unknown function
(DUF957); Region: DUF957; pfam06117"
/db_xref="CDD:147986"
gene complement(49481..49969)
/locus_tag="ECBD_0050"
/db_xref="GeneID:8160254"
CDS complement(49481..49969)
/locus_tag="ECBD_0050"
/inference="similar to AA sequence:KEGG:S3205"
/note="KEGG: sfx:S3205 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034315.1"
/db_xref="GI:253771484"
/db_xref="GeneID:8160254"
/translation="MKLALTLEADSVNVQALNMGRIVVDVDGVNLSELINKVSENGYL
LRVVDKSDQHATSTPPPLTTLTCIRCSTAHITETDNAWLYSLSHQTNDDGESEWIHFT
GSGYLLRTDAWSYPVLRLKRLGLSKTFRCLVVTLTRRYGVSLIHLDASAECLPGLPTF
NW"
gene complement(49966..50331)
/locus_tag="ECBD_0051"
/db_xref="GeneID:8160255"
CDS complement(49966..50331)
/locus_tag="ECBD_0051"
/inference="protein motif:PFAM:PF06755"
/note="PFAM: protein of unknown function DUF1219;
KEGG: sfx:S3204 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034316.1"
/db_xref="GI:253771485"
/db_xref="InterPro:IPR009610"
/db_xref="GeneID:8160255"
/translation="MSCPIREASRCPSPVTIWQTLLTRLLDQHYGLTLNDTPFADERV
IEQHIEAGISLCDAVNFLVEKYALVRTDQLGFSAGAPSQLINSIDILRARRATGLMTR
NNYRMVNNITQGKHPEAKR"
misc_feature complement(50023..50322)
/locus_tag="ECBD_0051"
/note="Protein of unknown function (DUF1219); Region:
DUF1219; pfam06755"
/db_xref="CDD:219161"
gene complement(50229..51353)
/locus_tag="ECBD_0052"
/db_xref="GeneID:8160256"
CDS complement(50229..51353)
/locus_tag="ECBD_0052"
/inference="protein motif:PFAM:PF00665"
/note="PFAM: Integrase catalytic region"
/codon_start=1
/transl_table=11
/product="Integrase catalytic region"
/protein_id="YP_003034317.1"
/db_xref="GI:253771486"
/db_xref="InterPro:IPR001584"
/db_xref="InterPro:IPR001598"
/db_xref="GeneID:8160256"
/translation="MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDT
GGIKPHERKRAVAHLTLSEREEIRAGLSAKMNIRAIATALNRSPSTISREVQRNRGRR
YYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQK
TLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPI
HERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALT
DKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIR
QYFPKKTCLAQYGRHRAARLPSPSGRHCSPDCWTSTTASR"
misc_feature complement(50292..51200)
/locus_tag="ECBD_0052"
/note="Transposase and inactivated derivatives, IS30
family [DNA replication, recombination, and repair];
Region: Tra8; COG2826"
/db_xref="CDD:225382"
misc_feature complement(51060..51182)
/locus_tag="ECBD_0052"
/note="Helix-turn-helix domain; Region: HTH_38; pfam13936"
/db_xref="CDD:206107"
misc_feature complement(50343..50663)
/locus_tag="ECBD_0052"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:216050"
gene complement(51310..51666)
/locus_tag="ECBD_0053"
/db_xref="GeneID:8160257"
CDS complement(51310..51666)
/locus_tag="ECBD_0053"
/inference="protein motif:PFAM:PF01527"
/note="PFAM: transposase IS3/IS911 family protein;
KEGG: sfv:SFV_4359 ISEhe3 orfA"
/codon_start=1
/transl_table=11
/product="transposase IS3/IS911 family protein"
/protein_id="YP_003034318.1"
/db_xref="GI:253771487"
/db_xref="InterPro:IPR002514"
/db_xref="GeneID:8160257"
/translation="MSGKRYPEEFKIEAVKQVVDRGYSVASVATRLDITTHSLYSWIK
KYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKAVVDSIGQRNSYVKTWGCRG
FLNETNIYSRGKSLCF"
misc_feature complement(51364..51666)
/locus_tag="ECBD_0053"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG2963"
/db_xref="CDD:225511"
misc_feature complement(51451..51657)
/locus_tag="ECBD_0053"
/note="Transposase; Region: HTH_Tnp_1; pfam01527"
/db_xref="CDD:201841"
gene complement(52699..56196)
/locus_tag="ECBD_0054"
/db_xref="GeneID:8160258"
CDS complement(52699..56196)
/locus_tag="ECBD_0054"
/inference="protein motif:TFAM:TIGR01414"
/note="TIGRFAM: outer membrane autotransporter barrel
domain protein; autotransporter-associated beta strand
repeat protein;
PFAM: Autotransporter beta- domain protein; Pertactin;
KEGG: cko:CKO_00426 hypothetical protein"
/codon_start=1
/transl_table=11
/product="outer membrane autotransporter barrel domain
protein"
/protein_id="YP_003034319.1"
/db_xref="GI:253771488"
/db_xref="InterPro:IPR004899"
/db_xref="InterPro:IPR005546"
/db_xref="InterPro:IPR006315"
/db_xref="InterPro:IPR013425"
/db_xref="GeneID:8160258"
/translation="MNKNIRILQFLVSIIYSVQSHFSGAQTIQLNGNGIPKSITRSIT
GVDGNAALNISVPYKTSYTQNILSVESSINIKGGTSNTSIGGAGVYGENFTLNNNGSV
WGGDGYNGGIAVSGNKISINNYRNVYGGNGLGGSGSSGGAGLSGDDIIVDNYRSIYGG
DDVGGTGGSGVTGSNITVHNSGGILGGNGVNGGDGINGSNLFITNDNMISGGYGIKQG
GDAISGNQITLNNNGIVQGGYGPDGGCSVYGEDIHINNHGNLSGLYNSQKDAYNTSII
FSGGYNSLDIYSDSVINGDIKLASIPVNGTNELIIKNINNATAINGGLMIGNGSSVYL
SGKNSIFNGNISIDEDASMNLSVGNANVHANTITLKSDSWLNIDTSIKNWTQDYYTLL
SSDTGISIADNSHIVQYNVLLTEGAESYVYTSLNDDDNKLISMLRWNNTKGMGYGTFN
IEKDATLNIGVSLSDNLSPLLYDGWDGKSLTKSGNGTLILSATNNYTGNTEVKSGVLI
LAAPDALGRTEYLYLSRGAELDMNGYPQTISKLLTAAGSVLNIHGGSLILNNGGESAG
TIAGDGSLNINGGMLDITGNNRNFSGVFTVNKGAHLAVSTADNLGTAFVDNYGTLTLN
STSAWQLTNNISGYGNVRKTGAGALNISDNAKWTGMTDIIQGTVILGNADSPVMLGSN
QVIVEEQGKLSGFGGVAGNLSNSGIVDLTTYMPGNILTVGGNYTGRNGLILLQTETGG
DNSKTDRLVIKGNASGRTRVAVTQAGGTGAETLNGIEVIHVSGNADNAEFIQTERITA
GAYDYILKRGQGINSTNWYLISRKDIPVPQPEAVPENHDNNLRPEAGSYVASIAAANN
LFVTNLYERQGQELYISHMTGEENEAGIWMYNKGKHNRWRDNSSQLRTRGNSYVVLIG
GDIAQWSLNGTDRWHTGMMAGYGHNNNSTNALSTGYHSEGRMNGYTAGLYATWYANDE
THNGSYLDSWLQYSWFDNHINGERLPAESWKSKGFTVSLEAGYSWKAGEFTDNYKGSH
EWYVQPQLQVVRMNVKSDKYHESNGTSIENTGNGNILTRLGARTWLTSKNGKNTRYAV
PFRPFVEAHWLHNSRVFGTSMNGVSIYQDGARDIGEINGGVVGMITPEVAFRADAGIQ
LGEHGYHNTSAMLSVEYRF"
sig_peptide complement(56119..56196)
/locus_tag="ECBD_0054"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.883) with cleavage site probability 0.880 at
residue 26"
misc_feature complement(54667..54762)
/locus_tag="ECBD_0054"
/note="Autotransporter-associated beta strand repeat;
Region: Autotrns_rpt; pfam12951"
/db_xref="CDD:205158"
misc_feature complement(53722..54378)
/locus_tag="ECBD_0054"
/note="Pertactin-like passenger domains (virulence
factors), C-terminal, subgroup 2, of autotransporter
proteins of the type V secretion system of Gram-negative
bacteria. This subgroup includes the passenger domains of
the nonprotease autotransporters, Ag43; Region:
PL2_Passenger_AT; cd01344"
/db_xref="CDD:238654"
misc_feature complement(52702..54051)
/locus_tag="ECBD_0054"
/note="outer membrane autotransporter barrel domain;
Region: autotrans_barl; TIGR01414"
/db_xref="CDD:233402"
misc_feature complement(52762..53550)
/locus_tag="ECBD_0054"
/note="Autotransporter beta-domain; Region:
Autotransporter; pfam03797"
/db_xref="CDD:217734"
gene complement(56475..56855)
/locus_tag="ECBD_0055"
/pseudo
/db_xref="GeneID:8160259"
gene 57475..57630
/locus_tag="ECBD_0056"
/db_xref="GeneID:8160260"
CDS 57475..57630
/locus_tag="ECBD_0056"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034320.1"
/db_xref="GI:253771489"
/db_xref="GeneID:8160260"
/translation="MSPAQAKQKQHERYEAVAVQVLRGRAGYKPAVKSRFSKSANSKF
SHTIAFA"
gene 57679..58053
/locus_tag="ECBD_0057"
/db_xref="GeneID:8160261"
CDS 57679..58053
/locus_tag="ECBD_0057"
/inference="similar to AA sequence:KEGG:KPN_pKPN5p08236"
/note="KEGG: kpn:KPN_pKPN5p08236 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034321.1"
/db_xref="GI:253771490"
/db_xref="GeneID:8160261"
/translation="MPVQDVIPPYEQMYLLNQQLICNADQLKHAVITVGGQAVQYWIS
YYHAQYGDRLPDERLTTSVDCDYSARKDDIAAIAKTLNVKTWENKDGQPPSLAQFMLI
DQDTHDIKRDDGRLFAVPDAPD"
gene 58206..58517
/locus_tag="ECBD_0058"
/db_xref="GeneID:8160262"
CDS 58206..58517
/locus_tag="ECBD_0058"
/inference="protein motif:PFAM:PF01527"
/note="PFAM: transposase IS3/IS911 family protein"
/codon_start=1
/transl_table=11
/product="transposase IS3/IS911 family protein"
/protein_id="YP_003034322.1"
/db_xref="GI:253771491"
/db_xref="InterPro:IPR002514"
/db_xref="GeneID:8160262"
/translation="MNKKTKRTFTPEFRLECAQLIVDKGYSYRQASEAMNVGSTTLES
WVRQLRRERQGIAPSATPITPDQQRIRELEKQVRRLEEQNTILKKATALLMSDSLNGS
R"
misc_feature 58206..58499
/locus_tag="ECBD_0058"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG2963"
/db_xref="CDD:225511"
misc_feature 58212..58442
/locus_tag="ECBD_0058"
/note="Transposase; Region: HTH_Tnp_1; cl17663"
/db_xref="CDD:248217"
gene complement(58364..59527)
/locus_tag="ECBD_0059"
/db_xref="GeneID:8160263"
CDS complement(58364..59527)
/locus_tag="ECBD_0059"
/inference="similar to AA sequence:KEGG:SeHA_A0075"
/note="KEGG: seh:SeHA_A0075 TrbC"
/codon_start=1
/transl_table=11
/product="TrbC"
/protein_id="YP_003034323.1"
/db_xref="GI:253771492"
/db_xref="GeneID:8160263"
/translation="MQHKVNEQFIRRSAWHSPVTSLLQNPDFFGPAIMAMMILPLFLP
LLTPLSILGMLFTGVIFNNHRWRCPMRMPATLKCDDPSEDREETARFLGAWNYTRIRP
GKARGAFFLGTQRGSDVGRELWLSQADLVRHIMFFSTTGGGKTETLFSLMLNSLCHAR
GFTMMDGKAQNDTARTIWYLALRFGREDDVEFINYMTGGRSRSELLHAGDKSLPESNS
FNPFVYATETLVTETLQSMLPQNVQGGEWQSRAIAMNKALVSGVKYLCVAEKRCMSMQ
LLREYMPLEKMAALYVTGVDTRWPEEALSPLKNYLQELPGFDMAHVRTPAMWTEEPRK
QHGYREPFSESDIKSAVAFFNIVFCSSRRRTCFSSSRIRCWSGVIGVAEGAIP"
gene complement(59581..60066)
/locus_tag="ECBD_0060"
/db_xref="GeneID:8160264"
CDS complement(59581..60066)
/locus_tag="ECBD_0060"
/inference="protein motif:TFAM:TIGR00621"
/note="TIGRFAM: single-strand binding protein;
PFAM: single-strand binding protein/Primosomal replication
protein n;
KEGG: cko:CKO_03842 single-stranded DNA-binding protein"
/codon_start=1
/transl_table=11
/product="single-strand binding protein"
/protein_id="YP_003034324.1"
/db_xref="GI:253771493"
/db_xref="InterPro:IPR000424"
/db_xref="InterPro:IPR011344"
/db_xref="GeneID:8160264"
/translation="MASKGINKVILIGYLGQDPDIRYMPNGGAVASIALATSETWRDK
QTGEMREQTEWHRVVLFGKLAEVASEYLRKGAQVYIDGQLRTRKWTDQTGQERYTTEV
VVHTGGTMQMLGSRQNSAQGGRGQPQQPQQGRQFSGNSPSPGNTAMSGSFSDDDDSIP
F"
misc_feature complement(59584..60054)
/locus_tag="ECBD_0060"
/note="Single-stranded DNA-binding protein [DNA
replication, recombination, and repair]; Region: Ssb;
COG0629"
/db_xref="CDD:223702"
misc_feature complement(59752..60042)
/locus_tag="ECBD_0060"
/note="SSB_OBF: A subfamily of OB folds similar to the OB
fold of ssDNA-binding protein (SSB). SSBs bind with high
affinity to ssDNA. They bind to and protect ssDNA
intermediates during DNA metabolic pathways. All bacterial
and eukaryotic SSBs studied to date...; Region: SSB_OBF;
cd04496"
/db_xref="CDD:239942"
misc_feature complement(order(59767..59769,59776..59778,59809..59811,
59836..59838,59899..59901,59905..59907,59950..59958,
60031..60042))
/locus_tag="ECBD_0060"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:239942"
misc_feature complement(order(59758..59760,59764..59766,59803..59808,
59812..59814,59818..59820,59842..59847,59884..59886,
59890..59892,59896..59898,59902..59904,59908..59913,
59947..59952,59971..59973,60001..60003,60019..60027))
/locus_tag="ECBD_0060"
/note="ssDNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:239942"
misc_feature complement(order(59824..59826,59830..59832,59836..59838))
/locus_tag="ECBD_0060"
/note="tetramer (dimer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:239942"
gene complement(60714..63095)
/locus_tag="ECBD_0061"
/db_xref="GeneID:8160265"
CDS complement(60714..63095)
/locus_tag="ECBD_0061"
/EC_number="3.2.1.84"
/inference="protein motif:PRIAM:3.2.1.84"
/note="PFAM: glycoside hydrolase family 31;
KEGG: ssn:SSON_0800 glucosidase"
/codon_start=1
/transl_table=11
/product="glucan 1,3-alpha-glucosidase"
/protein_id="YP_003034325.1"
/db_xref="GI:253771494"
/db_xref="InterPro:IPR000322"
/db_xref="GeneID:8160265"
/translation="MKTLKNWKLQNQSAHHIELLVDGQHSLCLYILEENMFRVLLKRK
GVLSLDRTWSIAPEKDVPWEGRHREDISGFSLPTWNMEQNDELLTITTSSLRVIIHKP
LWLEWHYKDNAGQWQELVNDRPTSAYLINAHGDGVAHYQSRRNDERFYGLGDKSGDLQ
RTGKRYEMRNLDAMGYNAVSTDPLYKHIPFTITHRSDISFGLFYDNLSNSWLDLGNEI
DNYHTTYRRWQAEAGDIDYYLFTGRCVLDITKAFVRLTGKTLFGPKWSLGYSGSTMHY
TDAPDAQNQLMQFIRLCKEHAIPCDSFQLSSGYTSINGKRYVFNWNYDKVPHPKMMSQ
EFHNAGIHLAANIKPCLLQDHPRYNEVAEQELFIRDSEYNVPERSSFWDDEGSHLDFT
NPQTVAWWQEGVTTQLLEMGIDSTWNDNNEFEVWDGEARCHGFGKEIAIKHIRPVMPL
LMCRASMEAQQKFAPNKRPYLISRSGCAGLQRYVQTWSGDNRTNWDTLRYNTRMGLGM
SLSGLYNIGHDVGGFSGDKPDPELFVRWVQNGVMHPRFTIHSWNDDHTVNEPWMYPEV
TPAIRSAIELRYRLMPYLYTLLWQAHADDEPILRPTFLDHEHDVQTFEECDDFMLGRD
ILVASVVEAGQRQRRVWLPDNKTGWYDFYNGEWFCGGQWITIDAPLEKLPLLVRAGAG
IPLSERITYVSEAEDNHRKLKLFPIKGTGKSTGLLFEDDGETWGYTEGNALWLEWELD
CTATTIELRINTHGDYRPAWETLKVIIPQGESRQLLINGIEAYEWNMNLSCND"
misc_feature complement(60747..63095)
/locus_tag="ECBD_0061"
/note="Alpha-glucosidases, family 31 of glycosyl
hydrolases [Carbohydrate transport and metabolism];
Region: COG1501"
/db_xref="CDD:224418"
misc_feature complement(62457..62660)
/locus_tag="ECBD_0061"
/note="Galactose mutarotase-like; Region: Gal_mutarotas_2;
pfam13802"
/db_xref="CDD:222390"
misc_feature complement(61383..62327)
/locus_tag="ECBD_0061"
/note="Glycosyl hydrolase family 31 (GH31) domain of a
bacterial protein family represented by Escherichia coli
protein Aec37. The gene encoding Aec37 (aec-37) is located
within a genomic island (AGI-3) isolated from the
extraintestinal avian pathogenic...; Region:
GH31_glycosidase_Aec37; cd06599"
/db_xref="CDD:133130"
misc_feature complement(order(61449..61451,61527..61529,61626..61628,
61635..61637,61674..61676,61839..61841,62178..62180))
/locus_tag="ECBD_0061"
/note="putative active site [active]"
/db_xref="CDD:133130"
misc_feature complement(order(61626..61628,61839..61841))
/locus_tag="ECBD_0061"
/note="putative catalytic site [active]"
/db_xref="CDD:133130"
gene complement(63110..64411)
/locus_tag="ECBD_0062"
/db_xref="GeneID:8160266"
CDS complement(63110..64411)
/locus_tag="ECBD_0062"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: ssn:SSON_0801 hexuronate transporter"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily MFS_1"
/protein_id="YP_003034326.1"
/db_xref="GI:253771495"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8160266"
/translation="MSQDINNNIAVSKHRRIIRQLRWWMLILFLMGVTVNYITRNSLG
ILAPELKDSLGITTEQYSWIVGGFQLAYTLFQPLCGWLIDVIGLKIGFMICASLWGIA
CLLHAGAGSWIQLALLRFFMGGAEASATPANAKIIGEWFPKSERPVAAGWAGVGFSIG
AMLAPPIIYFAHASFGWQGAFMFTGALAILWVFLWWACYNTPEEHPNLSKNELNFIRQ
DNEAPPVKMPFLTALKTVSKNKRFYGIAIPAFMAEPAWAVMSFWVPLYLAKAYGMDLK
QIALFAWLPFLCADLGSIASGYLTKLYTRLFGLSRVNSVIASSVSGAFLMVSLAVIAF
IDNPYIAIVLISIGGFGHQIISCMLSALVVESFDKGQMATVNGMRGSAAWIASFLFSL
IIGVTADKIGFNPLFIAMGFFDLIGAFFLVTFIAERRKKRT"
misc_feature complement(63137..64336)
/locus_tag="ECBD_0062"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(63137..64321)
/locus_tag="ECBD_0062"
/note="D-galactonate transporter; Region: 2A0114;
TIGR00893"
/db_xref="CDD:233174"
misc_feature complement(order(63251..63253,63260..63265,63272..63277,
63284..63289,63320..63322,63329..63334,63344..63346,
63353..63358,63365..63367,63533..63535,63545..63547,
63554..63556,63566..63568,63578..63580,63620..63622,
63629..63634,63641..63646,63653..63655,63929..63931,
63947..63952,63959..63964,63998..64000,64007..64012,
64019..64024,64031..64036,64172..64177,64181..64186,
64196..64198,64205..64210,64217..64219,64268..64273,
64277..64285,64292..64294))
/locus_tag="ECBD_0062"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 64673..65743
/locus_tag="ECBD_0063"
/db_xref="GeneID:8160267"
CDS 64673..65743
/locus_tag="ECBD_0063"
/inference="protein motif:PFAM:PF00532"
/note="PFAM: periplasmic binding protein/LacI
transcriptional regulator; regulatory protein LacI;
SMART: regulatory protein LacI;
KEGG: ssn:SSON_0802 transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LacI family transcriptional regulator"
/protein_id="YP_003034327.1"
/db_xref="GI:253771496"
/db_xref="InterPro:IPR000843"
/db_xref="InterPro:IPR001761"
/db_xref="GeneID:8160267"
/translation="MEKKLKIADIAMRTGLSSSTVSRVLAGKANTSYRAREKVLACAR
ELGVMDGMASGRMLLNNLVIFAPQRAFDERTDIFYFRVIQSISKALSHYEVRLRYCAL
DEFDSTPSKFLARMNEAETQAAILLGIDDPHIHDLAADFSKPCVMINCHDRRMRLPTV
APDHKNIGAFASHFLFEMGHRRVMNIMCLRRYTMELRLAGIKEAWERQNQNFKDDRDL
LTINSFSAKEAEEKVGAWLDMTEKSMLPTAFLASGDFIAAGIINALKKRNIRVPQDVS
VMSIDGFNLAAIEDVPLTAVHVPRDELGTEAVHMLQQRLVRPDATVGALLLYGKLVIR
ESVRRIRPGKEPTPIKGDGLYD"
misc_feature 64688..65695
/locus_tag="ECBD_0063"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:224525"
misc_feature 64694..>64813
/locus_tag="ECBD_0063"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature order(64694..64696,64718..64732,64736..64741,64748..64750,
64763..64768,64775..64777)
/locus_tag="ECBD_0063"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature 64889..65668
/locus_tag="ECBD_0063"
/note="Ligand binding domain of the LacI tanscriptional
regulator family belonging to the type I
periplasmic-binding fold protein superfamily; Region:
PBP1_LacI_sugar_binding_like; cd06267"
/db_xref="CDD:107262"
misc_feature order(64904..64909,64916..64918,65051..65053,65117..65119,
65156..65158,65261..65263,65342..65344,65513..65515,
65564..65566)
/locus_tag="ECBD_0063"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107262"
misc_feature order(64907..64915,64922..64927,64931..64936,64955..64969,
64973..64975,65006..65008,65015..65017,65024..65032,
65351..65353,65444..65446,65456..65458,65465..65470)
/locus_tag="ECBD_0063"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107262"
gene complement(65768..65998)
/locus_tag="ECBD_0064"
/db_xref="GeneID:8160268"
CDS complement(65768..65998)
/locus_tag="ECBD_0064"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034328.1"
/db_xref="GI:253771497"
/db_xref="GeneID:8160268"
/translation="MNYPMDSLTPFHNALLSNTLWLTSKKTGFPLPAGNHLPGVFGWS
GYSCLVISKIIAINSGKLIVHNLVMNITFIFP"
gene complement(66141..67184)
/locus_tag="ECBD_0065"
/db_xref="GeneID:8160269"
CDS complement(66141..67184)
/locus_tag="ECBD_0065"
/inference="similar to AA sequence:KEGG:SFV_3869"
/note="KEGG: sfv:SFV_3869 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034329.1"
/db_xref="GI:253771498"
/db_xref="GeneID:8160269"
/translation="MNDRLCFEVHDNQGYFVFPDTWFGPLLGEFEEVLDAYDADEISE
TSYINKLRRLAQREPDFIDIHVHLAYAFLEQNAPRKALNAALKGLAAGNRIIPESFCG
EIIWMHPENRPYLRALYAAILANVHLQRHQDAVMLTDKILAYNPEDNQGARWLLGSEL
LRTGDHERAFSVLKEHADEFSPYWYELGLLHFLNGEHVKAATAFRHGFATNTYIAEML
CGNLHPFPLAVWHDFSGSLDTAEDYYATYSPLWGQYPEALLFVNWLYNHSSVLHERAE
IIKCAEMLMQEDDFEICESILRQQEKLRERIDETLSEKIVQKCRNMNGEYVWPWILPF
SAAGMKHTGIQYQ"
misc_feature complement(66570..66818)
/locus_tag="ECBD_0065"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cl02429"
/db_xref="CDD:243034"
misc_feature complement(order(66573..66575,66585..66587,66621..66623,
66666..66668,66678..66680,66714..66716,66762..66764,
66771..66773,66783..66785,66813..66815))
/locus_tag="ECBD_0065"
/note="TPR motif; other site"
/db_xref="CDD:238112"
misc_feature complement(order(66603..66608,66615..66620,66627..66632,
66699..66704,66711..66716,66720..66725,66807..66812))
/locus_tag="ECBD_0065"
/note="binding surface"
/db_xref="CDD:238112"
gene complement(67595..68779)
/locus_tag="ECBD_0066"
/db_xref="GeneID:8160270"
CDS complement(67595..68779)
/locus_tag="ECBD_0066"
/inference="protein motif:PFAM:PF00589"
/note="PFAM: integrase;
KEGG: ssn:SSON_3744 integrase"
/codon_start=1
/transl_table=11
/product="integrase"
/protein_id="YP_003034330.1"
/db_xref="GI:253771499"
/db_xref="InterPro:IPR002104"
/db_xref="GeneID:8160270"
/translation="MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRF
AGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEA
IAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGA
LEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLND
LAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVP
LSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRH
TMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYLDGRREMMQWYADYIDSLSSR
ES"
misc_feature complement(67607..68773)
/locus_tag="ECBD_0066"
/note="integrase; Provisional; Region: PRK09692"
/db_xref="CDD:170049"
misc_feature complement(67628..68701)
/locus_tag="ECBD_0066"
/note="Bacteriophage P4 integrase. P4-like integrases are
found in temperate bacteriophages, integrative plasmids,
pathogenicity and symbiosis islands, and other mobile
genetic elements. They share the same fold in their
catalytic domain and the overall...; Region: INT_P4;
cd00801"
/db_xref="CDD:238416"
misc_feature complement(order(67682..67684,67712..67714,67781..67783,
67790..67792,67976..67978,68057..68059))
/locus_tag="ECBD_0066"
/note="active site"
/db_xref="CDD:238416"
misc_feature complement(order(67682..67684,67712..67714,67781..67783,
67790..67792,67976..67978,68057..68059))
/locus_tag="ECBD_0066"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:238416"
gene complement(69083..69173)
/locus_tag="ECBD_R0001"
/note="tRNA-SeC(p)1"
/db_xref="GeneID:8160271"
tRNA complement(69083..69173)
/locus_tag="ECBD_R0001"
/product="tRNA-Sec"
/db_xref="GeneID:8160271"
gene 69466..70848
/locus_tag="ECBD_0067"
/db_xref="GeneID:8160272"
CDS 69466..70848
/locus_tag="ECBD_0067"
/inference="protein motif:TFAM:TIGR00792"
/note="may be involved in the transport of
galactosides-pentoses-hexuronides"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="YP_003034331.1"
/db_xref="GI:253771500"
/db_xref="InterPro:IPR001927"
/db_xref="GeneID:8160272"
/translation="MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPA
GFVGTMFLVARALDAISDPCMGLLADRTRSRRGKFRPWVLFGALPFGIVCVLAYSTPD
LSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM
LSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMR
EDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGN
LIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQL
VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDA
AEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQ
QQFTSQEVQN"
misc_feature 69466..70845
/locus_tag="ECBD_0067"
/note="putative transporter; Provisional; Region:
PRK11462"
/db_xref="CDD:183145"
misc_feature 69466..70842
/locus_tag="ECBD_0067"
/note="Na+/melibiose symporter and related transporters
[Carbohydrate transport and metabolism]; Region: MelB;
COG2211"
/db_xref="CDD:225121"
gene 70858..73176
/locus_tag="ECBD_0068"
/db_xref="GeneID:8160273"
CDS 70858..73176
/locus_tag="ECBD_0068"
/inference="protein motif:PFAM:PF01055"
/note="catalyzes the transfer of alpha-xylosyl residue
from alpha-xyloside to xylose, glucose, mannose, fructose,
maltose, isomaltose, nigerose, kojibiose, sucrose, and
trehalose; shows higher activity against alpha-xylosyl
fluoride, isoprimeverose
(6-O-alpha-xylopyranosyl-glucopyranose), and
alpha-xyloside in xyloglucan oligosaccharides"
/codon_start=1
/transl_table=11
/product="alpha-xylosidase YicI"
/protein_id="YP_003034332.1"
/db_xref="GI:253771501"
/db_xref="InterPro:IPR000322"
/db_xref="GeneID:8160273"
/translation="MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRER
TWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAE
FKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGE
TVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGILVNHPQCVSF
EVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTS
FTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRR
LKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNP
DACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWN
VLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFW
SHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLK
CRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAG
DVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVW
HEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRN
VVKVNGLQDGSQAESEQGLVVKPQGNALTITL"
misc_feature 70858..72855
/locus_tag="ECBD_0068"
/note="putative alpha-glucosidase; Provisional; Region:
PRK10658"
/db_xref="CDD:236731"
misc_feature 71332..71514
/locus_tag="ECBD_0068"
/note="Galactose mutarotase-like; Region: Gal_mutarotas_2;
pfam13802"
/db_xref="CDD:222390"
misc_feature 71632..72564
/locus_tag="ECBD_0068"
/note="YicI alpha-xylosidase is a glycosyl hydrolase
family 31 (GH31) enzyme that catalyzes the release of an
alpha-xylosyl residue from the non-reducing end of
alpha-xyloside substrates such as alpha-xylosyl fluoride
and isoprimeverose. YicI forms a...; Region:
GH31_xylosidase_YicI; cd06593"
/db_xref="CDD:133124"
misc_feature order(71773..71775,71890..71892,72097..72099,72103..72108,
72253..72255,72292..72294,72301..72303,72400..72402,
72478..72480)
/locus_tag="ECBD_0068"
/note="active site"
/db_xref="CDD:133124"
misc_feature order(71791..71796,71911..71916,71938..71940,71977..71979,
71983..71985)
/locus_tag="ECBD_0068"
/note="homotrimer interface [polypeptide binding]; other
site"
/db_xref="CDD:133124"
misc_feature order(72103..72105,72301..72303)
/locus_tag="ECBD_0068"
/note="catalytic site [active]"
/db_xref="CDD:133124"
misc_feature order(72307..72309,72316..72318,72331..72333)
/locus_tag="ECBD_0068"
/note="homohexamer (dimer of homotrimers) interface
[polypeptide binding]; other site"
/db_xref="CDD:133124"
gene complement(73229..74938)
/locus_tag="ECBD_0069"
/db_xref="GeneID:8160274"
CDS complement(73229..74938)
/locus_tag="ECBD_0069"
/inference="protein motif:PFAM:PF05170"
/note="PFAM: AsmA family protein;
KEGG: sfx:S4074 hypothetical protein"
/codon_start=1
/transl_table=11
/product="AsmA family protein"
/protein_id="YP_003034333.1"
/db_xref="GI:253771502"
/db_xref="InterPro:IPR007844"
/db_xref="GeneID:8160274"
/translation="MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSD
YHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTIL
LENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVL
GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADG
SWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLS
LRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGG
MVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRN
LIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLA
LTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPEL
PLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTE
PVR"
misc_feature complement(73253..74938)
/locus_tag="ECBD_0069"
/note="AsmA family; Region: AsmA; pfam05170"
/db_xref="CDD:218477"
sig_peptide complement(74843..74938)
/locus_tag="ECBD_0069"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.907) with cleavage site probability 0.372 at
residue 32"
misc_feature complement(74180..74650)
/locus_tag="ECBD_0069"
/note="Domain of Unknown Function (DUF748); Region:
DUF748; pfam05359"
/db_xref="CDD:218568"
gene complement(75059..76450)
/locus_tag="ECBD_0070"
/db_xref="GeneID:8160275"
CDS complement(75059..76450)
/locus_tag="ECBD_0070"
/inference="protein motif:TFAM:TIGR00801"
/note="TIGRFAM: uracil-xanthine permease;
PFAM: xanthine/uracil/vitamin C permease;
KEGG: ssn:SSON_3751 transport protein"
/codon_start=1
/transl_table=11
/product="uracil-xanthine permease"
/protein_id="YP_003034334.1"
/db_xref="GI:253771503"
/db_xref="InterPro:IPR006042"
/db_xref="InterPro:IPR006043"
/db_xref="GeneID:8160275"
/translation="MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLL
AMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQG
TSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPL
VSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNP
YLRVASLVIAMAAGYALAWFMGMLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLML
VFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCF
GQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIA
ASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPEWLKNLLSSGIAAGGIT
AIVLNLIFPPEKQ"
misc_feature complement(75062..76396)
/locus_tag="ECBD_0070"
/note="Xanthine/uracil permeases [Nucleotide transport and
metabolism]; Region: UraA; COG2233"
/db_xref="CDD:225142"
gene 76730..77935
/locus_tag="ECBD_0071"
/db_xref="GeneID:8160276"
CDS 76730..77935
/locus_tag="ECBD_0071"
/inference="protein motif:TFAM:TIGR00210"
/note="TIGRFAM: sodium/glutamate symporter;
PFAM: sodium/glutamate symporter;
KEGG: sdy:SDY_4085 glutamate transport"
/codon_start=1
/transl_table=11
/product="sodium/glutamate symporter"
/protein_id="YP_003034335.1"
/db_xref="GI:253771504"
/db_xref="InterPro:IPR004445"
/db_xref="GeneID:8160276"
/translation="MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLL
VALALLVLKKSMGWEVNFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVV
GLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEV
AMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLI
ETIALIAICLTVGKIVAQLLAGTAFELPTFVCVLFVGVILSNGLSIMGFYRVFERAVS
VLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYD
AAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKL
YLMLPIFAG"
misc_feature 76787..77923
/locus_tag="ECBD_0071"
/note="sodium--glutamate symport carrier (gltS); Region:
gltS; TIGR00210"
/db_xref="CDD:129314"
gene 77938..78804
/locus_tag="ECBD_0072"
/db_xref="GeneID:8160277"
CDS 77938..78804
/locus_tag="ECBD_0072"
/inference="similar to AA sequence:KEGG:EFER_3945"
/note="KEGG: efe:EFER_3945 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034336.1"
/db_xref="GI:253771505"
/db_xref="GeneID:8160277"
/translation="MKKRRKEPETLREHCRHIFGDEPPVLCVWETEFDYADAELKALA
AKEWQQISEWDLSAYYVLNLVYNEPMQIELFRYLFPLCLAQWHETVLAGGYGDHFEES
LMKALCRPYLWQEMMNASQRQQVRQFLLDTALQRMDNERGFNNVLCWLAVFNTLGGAA
PLIRSLWSRWWALDTPGKAVCAIQYAAHLIYPIEANPLWSQEWIGWGHPLGHKDGWSS
DNRAFLRQMLTPEMIVAGVQAAAEILRGEPEGAMAARIAQDAYEAMDILTIQIEDLLR
DLSCDESGHALE"
gene complement(78789..80870)
/locus_tag="ECBD_0073"
/db_xref="GeneID:8160278"
CDS complement(78789..80870)
/locus_tag="ECBD_0073"
/inference="protein motif:TFAM:TIGR00643"
/note="catalyzes branch migration in Holliday junction
intermediates"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase RecG"
/protein_id="YP_003034337.1"
/db_xref="GI:253771506"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR004365"
/db_xref="InterPro:IPR004609"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:8160278"
/translation="MKGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRY
EDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAA
MKNSLAAGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQ
ATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQH
PAQRRLILEELLAHNLSMLALRAGAQRFHAQPLSANDTLKNKLLAALPFKPTGAQARV
VAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHA
NNFRNWFAPLGIEVGWLAGKQKGKARLAQQEAIASGQVQMIVGTHAIFQEQVQFNGLA
LVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
LPPGRTPVTTVAIPDTRRTDIIDRVHHACITEGRQAYWVCTLIEESELLEAQAAEATW
EELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMI
IENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQ
KDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIER
WMPETERYSNA"
misc_feature complement(78792..80870)
/locus_tag="ECBD_0073"
/note="ATP-dependent DNA helicase RecG; Provisional;
Region: PRK10917"
/db_xref="CDD:236794"
misc_feature complement(80466..80684)
/locus_tag="ECBD_0073"
/note="RecG_wedge_OBF: A subfamily of OB folds
corresponding to the OB fold found in the N-terminal
(wedge) domain of Escherichia coli RecG. RecG is a
branched-DNA-specific helicase, which catalyzes the
interconversion of a DNA replication fork to a...; Region:
RecG_wedge_OBF; cd04488"
/db_xref="CDD:239934"
misc_feature complement(order(80466..80468,80523..80525,80529..80531,
80535..80537,80682..80684))
/locus_tag="ECBD_0073"
/note="generic binding surface II; other site"
/db_xref="CDD:239934"
misc_feature complement(order(80487..80489,80565..80567,80580..80582,
80631..80633))
/locus_tag="ECBD_0073"
/note="ssDNA binding site; other site"
/db_xref="CDD:239934"
misc_feature complement(79581..79997)
/locus_tag="ECBD_0073"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:238005"
misc_feature complement(79962..79976)
/locus_tag="ECBD_0073"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238005"
misc_feature complement(79671..79682)
/locus_tag="ECBD_0073"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:238005"
misc_feature complement(79080..>79337)
/locus_tag="ECBD_0073"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:238034"
misc_feature complement(order(79215..79223,79296..79301))
/locus_tag="ECBD_0073"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:238034"
misc_feature complement(order(79110..79112,79119..79121,79131..79133,
79197..79199))
/locus_tag="ECBD_0073"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:238034"
STS 79855..80014
/standard_name="G01784"
/db_xref="UniSTS:73161"
gene complement(80876..81565)
/locus_tag="ECBD_0074"
/db_xref="GeneID:8160279"
CDS complement(80876..81565)
/locus_tag="ECBD_0074"
/EC_number="2.1.1.34"
/inference="protein motif:PRIAM:2.1.1.34"
/note="specifically modifies tRNA at position G18"
/codon_start=1
/transl_table=11
/product="tRNA guanosine-2'-O-methyltransferase"
/protein_id="YP_003034338.1"
/db_xref="GI:253771507"
/db_xref="InterPro:IPR001537"
/db_xref="GeneID:8160279"
/translation="MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVG
VHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA
VDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE
AQRQRQNAGMYLRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEAD
ADWWATMQAAG"
misc_feature complement(80882..81565)
/locus_tag="ECBD_0074"
/note="tRNA guanosine-2'-O-methyltransferase; Provisional;
Region: PRK11081"
/db_xref="CDD:236837"
misc_feature complement(81089..81511)
/locus_tag="ECBD_0074"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
pfam00588"
/db_xref="CDD:216010"
misc_feature complement(80903..81079)
/locus_tag="ECBD_0074"
/note="SpoU, rRNA methylase, C-terminal; Region:
SpoU_methylas_C; pfam12105"
/db_xref="CDD:152540"
gene complement(81572..83680)
/locus_tag="ECBD_0075"
/db_xref="GeneID:8160280"
CDS complement(81572..83680)
/locus_tag="ECBD_0075"
/EC_number="3.1.7.2"
/inference="protein motif:TFAM:TIGR00691"
/note="KEGG: sfv:SFV_3879 bifunctional (p)ppGpp synthetase
II/guanosine-3',5'-bis pyrophosphate
3'-pyrophosphohydrolase;
TIGRFAM: RelA/SpoT family protein;
PFAM: RelA/SpoT domain protein; TGS domain protein;
metal-dependent phosphohydrolase HD sub domain;
SMART: metal-dependent phosphohydrolase HD region"
/codon_start=1
/transl_table=11
/product="bifunctional (p)ppGpp synthetase II/
guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase"
/protein_id="YP_003034339.1"
/db_xref="GI:253771508"
/db_xref="InterPro:IPR003607"
/db_xref="InterPro:IPR004095"
/db_xref="InterPro:IPR004811"
/db_xref="InterPro:IPR006674"
/db_xref="InterPro:IPR007685"
/db_xref="GeneID:8160280"
/translation="MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEP
YITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSK
LDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILS
EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRV
LGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHSVPVEVQIRTEDMDQMAEMG
VAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFT
PEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENI
QRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGV
LITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQE
FITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLA
NIMRKIRVMPDVIKVTRNRN"
misc_feature complement(81575..83680)
/locus_tag="ECBD_0075"
/note="bifunctional (p)ppGpp synthetase II/
guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase;
Provisional; Region: PRK11092"
/db_xref="CDD:236843"
misc_feature complement(83183..83554)
/locus_tag="ECBD_0075"
/note="Metal dependent phosphohydrolases with conserved
'HD' motif; Region: HDc; cd00077"
/db_xref="CDD:238032"
misc_feature complement(order(83264..83266,83462..83467,83537..83539))
/locus_tag="ECBD_0075"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:238032"
misc_feature complement(83462..83464)
/locus_tag="ECBD_0075"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238032"
misc_feature complement(82682..83041)
/locus_tag="ECBD_0075"
/note="Nucleotidyltransferase (NT) domain of RelA- and
SpoT-like ppGpp synthetases and hydrolases; Region:
NT_Rel-Spo_like; cd05399"
/db_xref="CDD:143389"
misc_feature complement(order(82685..82690,82712..82714,82718..82720,
82724..82726,82760..82762,82772..82774,82778..82780,
82784..82786,82799..82801,82805..82807,82889..82891,
82901..82906,82967..82969,82973..82975))
/locus_tag="ECBD_0075"
/note="synthetase active site [active]"
/db_xref="CDD:143389"
misc_feature complement(order(82688..82690,82718..82720,82724..82726,
82760..82762,82772..82774,82778..82780,82784..82786,
82799..82801,82805..82807,82973..82975))
/locus_tag="ECBD_0075"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143389"
misc_feature complement(order(82724..82726,82904..82906))
/locus_tag="ECBD_0075"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143389"
misc_feature complement(82340..82519)
/locus_tag="ECBD_0075"
/note="TGS_RelA_SpoT: The RelA (SpoT) protein, also
referred to as ppGpp hydrolase/synthetase, is a
ribosome-associated protein that is activated during amino
acid starvation and thought to mediate the stringent
response. RelA contains a TGS domain, named after...;
Region: TGS_RelA_SpoT; cd01668"
/db_xref="CDD:133438"
misc_feature complement(81584..81796)
/locus_tag="ECBD_0075"
/note="ACT domain found C-terminal of the RelA/SpoT
domains; Region: ACT_RelA-SpoT; cd04876"
/db_xref="CDD:153148"
gene complement(83699..83974)
/gene="rpoZ"
/locus_tag="ECBD_0076"
/db_xref="GeneID:8160281"
CDS complement(83699..83974)
/gene="rpoZ"
/locus_tag="ECBD_0076"
/inference="protein motif:TFAM:TIGR00690"
/note="promotes RNA polymerase assembly or stability;
latches the N- and C-terminal regions of the beta' subunit
thereby facilitating its interaction with the beta and
subunit alphas"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit omega"
/protein_id="YP_003034340.1"
/db_xref="GI:253771509"
/db_xref="InterPro:IPR003716"
/db_xref="InterPro:IPR006110"
/db_xref="GeneID:8160281"
/translation="MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEEND
KTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR"
misc_feature complement(83795..83974)
/gene="rpoZ"
/locus_tag="ECBD_0076"
/note="DNA-directed RNA polymerase, omega subunit; Region:
rpoZ; TIGR00690"
/db_xref="CDD:188073"
gene complement(84029..84652)
/gene="gmk"
/locus_tag="ECBD_0077"
/db_xref="GeneID:8160282"
CDS complement(84029..84652)
/gene="gmk"
/locus_tag="ECBD_0077"
/EC_number="2.7.4.8"
/inference="protein motif:TFAM:TIGR03263"
/note="Essential for recycling GMP and indirectly, cGMP"
/codon_start=1
/transl_table=11
/product="guanylate kinase"
/protein_id="YP_003034341.1"
/db_xref="GI:253771510"
/db_xref="InterPro:IPR008144"
/db_xref="InterPro:IPR008145"
/db_xref="InterPro:IPR017665"
/db_xref="GeneID:8160282"
/translation="MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQP
RPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLD
IDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHY
AEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD"
misc_feature complement(84083..84652)
/gene="gmk"
/locus_tag="ECBD_0077"
/note="Guanylate kinase [Nucleotide transport and
metabolism]; Region: Gmk; COG0194"
/db_xref="CDD:223272"
misc_feature complement(84113..84637)
/gene="gmk"
/locus_tag="ECBD_0077"
/note="Guanosine monophosphate kinase (GMPK, EC 2.7.4.8),
also known as guanylate kinase (GKase), catalyzes the
reversible phosphoryl transfer from adenosine triphosphate
(ATP) to guanosine monophosphate (GMP) to yield adenosine
diphosphate (ADP) and guanosine...; Region: GMPK; cd00071"
/db_xref="CDD:238026"
misc_feature complement(order(84407..84409,84422..84424,84491..84493,
84518..84520,84527..84529,84548..84550,84602..84604,
84620..84622))
/gene="gmk"
/locus_tag="ECBD_0077"
/note="catalytic site [active]"
/db_xref="CDD:238026"
misc_feature complement(order(84602..84604,84620..84622))
/gene="gmk"
/locus_tag="ECBD_0077"
/note="G-X2-G-X-G-K; other site"
/db_xref="CDD:238026"
gene 84910..86592
/gene="ligB"
/locus_tag="ECBD_0078"
/db_xref="GeneID:8160283"
CDS 84910..86592
/gene="ligB"
/locus_tag="ECBD_0078"
/EC_number="6.5.1.2"
/inference="protein motif:PRIAM:6.5.1.2"
/note="this ligase is similar to LigA but it lacks the
C-terminal BRCT domain; catalyzes strand joining of nicked
DNA in the presence of a divalent cation and NAD+"
/codon_start=1
/transl_table=11
/product="NAD-dependent DNA ligase LigB"
/protein_id="YP_003034342.1"
/db_xref="GI:253771511"
/db_xref="InterPro:IPR001679"
/db_xref="InterPro:IPR004150"
/db_xref="InterPro:IPR013839"
/db_xref="InterPro:IPR013840"
/db_xref="GeneID:8160283"
/translation="MKVWMAILISILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQW
DDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRK
MVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSL
ISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSL
GVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVT
DGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA
PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP
PENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS
WLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERS
WSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP"
misc_feature 84910..86589
/gene="ligB"
/locus_tag="ECBD_0078"
/note="NAD-dependent DNA ligase LigB; Reviewed; Region:
ligB; PRK08097"
/db_xref="CDD:236150"
sig_peptide 84910..84972
/gene="ligB"
/locus_tag="ECBD_0078"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.986) with cleavage site probability 0.675 at
residue 21"
misc_feature 85003..85830
/gene="ligB"
/locus_tag="ECBD_0078"
/note="NAD+ dependent DNA ligase adenylation domain. DNA
ligases catalyze the crucial step of joining the breaks in
duplex DNA during DNA replication, repair and
recombination, utilizing either ATP or NAD(+) as a
cofactor, but using the same basic reaction...; Region:
LIGANc; cd00114"
/db_xref="CDD:238062"
misc_feature order(85207..85209,85273..85275,85279..85281,85342..85344,
85447..85449,85576..85578,85747..85749,85753..85755)
/gene="ligB"
/locus_tag="ECBD_0078"
/note="nucleotide binding pocket [chemical binding]; other
site"
/db_xref="CDD:238062"
misc_feature order(85279..85281,85285..85290)
/gene="ligB"
/locus_tag="ECBD_0078"
/note="K-X-D-G motif; other site"
/db_xref="CDD:238062"
misc_feature 85279..85281
/gene="ligB"
/locus_tag="ECBD_0078"
/note="catalytic site [active]"
/db_xref="CDD:238062"
misc_feature 85837..86088
/gene="ligB"
/locus_tag="ECBD_0078"
/note="NAD-dependent DNA ligase OB-fold domain; Region:
DNA_ligase_OB; pfam03120"
/db_xref="CDD:145978"
gene complement(86589..87206)
/locus_tag="ECBD_0079"
/db_xref="GeneID:8160284"
CDS complement(86589..87206)
/locus_tag="ECBD_0079"
/inference="protein motif:PFAM:PF03458"
/note="PFAM: protein of unknown function UPF0126;
KEGG: sdy:SDY_4077 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034343.1"
/db_xref="GI:253771512"
/db_xref="InterPro:IPR005115"
/db_xref="GeneID:8160284"
/translation="MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGG
SVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSI
IGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLY
IALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH"
misc_feature complement(86592..87206)
/locus_tag="ECBD_0079"
/note="Predicted membrane protein [Function unknown];
Region: COG2860"
/db_xref="CDD:225415"
misc_feature complement(<87015..87200)
/locus_tag="ECBD_0079"
/note="UPF0126 domain; Region: UPF0126; pfam03458"
/db_xref="CDD:217571"
misc_feature complement(86706..86942)
/locus_tag="ECBD_0079"
/note="UPF0126 domain; Region: UPF0126; pfam03458"
/db_xref="CDD:217571"
gene complement(87497..88321)
/gene="dinD"
/locus_tag="ECBD_0080"
/db_xref="GeneID:8160285"
CDS complement(87497..88321)
/gene="dinD"
/locus_tag="ECBD_0080"
/inference="similar to AA sequence:KEGG:SbBS512_E4096"
/note="KEGG: sbc:SbBS512_E4096 DNA-damage-inducible
protein D"
/codon_start=1
/transl_table=11
/product="DNA-damage-inducible protein D"
/protein_id="YP_003034344.1"
/db_xref="GI:253771513"
/db_xref="GeneID:8160285"
/translation="MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLA
RATQACEASNQAASDHFVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVI
AAGQTYFAIQTRRQELADDEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGGATAI
DFAIFQNHGYRGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLK
RDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK"
misc_feature complement(87500..88321)
/gene="dinD"
/locus_tag="ECBD_0080"
/note="DNA-damage-inducible protein D; Provisional;
Region: dinD; PRK11525"
/db_xref="CDD:183178"
misc_feature complement(87992..88294)
/gene="dinD"
/locus_tag="ECBD_0080"
/note="BRO family, N-terminal domain; Region: Bro-N;
pfam02498"
/db_xref="CDD:217068"
gene 88385..88525
/locus_tag="ECBD_0081"
/db_xref="GeneID:8160286"
CDS 88385..88525
/locus_tag="ECBD_0081"
/inference="similar to AA sequence:KEGG:SbBS512_E4095"
/note="KEGG: sbc:SbBS512_E4095 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034345.1"
/db_xref="GI:253771514"
/db_xref="GeneID:8160286"
/translation="MSISRSQCAGQKNIAKSGAGTQNRIEVAGKKNAALFEWAAFVKA
EK"
gene complement(88542..89405)
/locus_tag="ECBD_0082"
/db_xref="GeneID:8160287"
CDS complement(88542..89405)
/locus_tag="ECBD_0082"
/inference="protein motif:PFAM:PF03755"
/note="PFAM: YicC domain protein; domain of unknown
function DUF1732;
KEGG: ssn:SSON_3762 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034346.1"
/db_xref="GI:253771515"
/db_xref="InterPro:IPR005229"
/db_xref="InterPro:IPR013527"
/db_xref="InterPro:IPR013551"
/db_xref="GeneID:8160287"
/translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
LEPVVRERIRSRLTRGKVECTLRYEPDVSAQGELILNEKLAKQLVTAANWVKMQSDEG
EINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
EGVTAEVVKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEEL
DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLI
EQMREQIQNIE"
misc_feature complement(88545..89405)
/locus_tag="ECBD_0082"
/note="hypothetical protein; Provisional; Region:
PRK11820"
/db_xref="CDD:236993"
misc_feature complement(88944..89402)
/locus_tag="ECBD_0082"
/note="YicC-like family, N-terminal region; Region:
YicC_N; pfam03755"
/db_xref="CDD:217714"
misc_feature complement(88545..88802)
/locus_tag="ECBD_0082"
/note="Domain of unknown function (DUF1732); Region:
DUF1732; pfam08340"
/db_xref="CDD:149411"
STS 89426..89750
/standard_name="57061"
/db_xref="UniSTS:523638"
gene 89532..90248
/gene="rph"
/locus_tag="ECBD_0083"
/db_xref="GeneID:8160288"
CDS 89532..90248
/gene="rph"
/locus_tag="ECBD_0083"
/EC_number="2.7.7.56"
/inference="protein motif:TFAM:TIGR01966"
/note="RNase PH; tRNA nucleotidyltransferase; forms
hexamers in Bacillus subtilis; phosphoroltic 3'-5'
exoribonuclease; involved in maturation of tRNA precursors
and removes terminal nucleotides near CCA acceptor arms of
mature tRNAs"
/codon_start=1
/transl_table=11
/product="ribonuclease PH"
/protein_id="YP_003034347.1"
/db_xref="GI:253771516"
/db_xref="InterPro:IPR001247"
/db_xref="InterPro:IPR002381"
/db_xref="InterPro:IPR015847"
/db_xref="GeneID:8160288"
/translation="MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
EGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
DLKALGEFTITLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVA
AVSVGIVNGEAICDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLL
ALARGGIESIVATQKAALAN"
misc_feature 89532..90242
/gene="rph"
/locus_tag="ECBD_0083"
/note="ribonuclease PH; Reviewed; Region: rph; PRK00173"
/db_xref="CDD:178914"
misc_feature 89559..90239
/gene="rph"
/locus_tag="ECBD_0083"
/note="Ribonuclease PH; Region: RNase_PH_bact; cd11362"
/db_xref="CDD:206767"
misc_feature order(89589..89603,89631..89633,89637..89639,89643..89645,
89649..89651,89655..89657,89715..89717,89721..89723,
89727..89744,89748..89750,89757..89762,89784..89789,
89793..89798,89805..89807,89817..89819,89826..89828,
89868..89870,89874..89876,89880..89882,89886..89894,
90117..90131,90135..90137,90141..90158,90162..90164,
90171..90176,90183..90188,90195..90197)
/gene="rph"
/locus_tag="ECBD_0083"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:206767"
misc_feature order(89724..89726,89787..89789,89892..89909,90069..90071,
90087..90089)
/gene="rph"
/locus_tag="ECBD_0083"
/note="active site"
/db_xref="CDD:206767"
gene 90314..90955
/gene="pyrE"
/locus_tag="ECBD_0084"
/db_xref="GeneID:8160289"
CDS 90314..90955
/gene="pyrE"
/locus_tag="ECBD_0084"
/EC_number="2.4.2.10"
/inference="protein motif:TFAM:TIGR00336"
/note="involved in fifth step of pyrimidine biosynthesis;
converts orotidine 5'-phosphate and diphosphate to orotate
and 5-phospho-alpha-D-ribose 1-diphosphate"
/codon_start=1
/transl_table=11
/product="orotate phosphoribosyltransferase"
/protein_id="YP_003034348.1"
/db_xref="GI:253771517"
/db_xref="InterPro:IPR000836"
/db_xref="InterPro:IPR004467"
/db_xref="GeneID:8160289"
/translation="MKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
DLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEA
KDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERG
RGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV"
misc_feature 90458..90811
/gene="pyrE"
/locus_tag="ECBD_0084"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(90524..90526,90530..90532,90683..90691,90695..90709,
90779..90781)
/gene="pyrE"
/locus_tag="ECBD_0084"
/note="active site"
/db_xref="CDD:206754"
gene complement(90992..91588)
/gene="slmA"
/locus_tag="ECBD_0085"
/db_xref="GeneID:8160290"
CDS complement(90992..91588)
/gene="slmA"
/locus_tag="ECBD_0085"
/inference="protein motif:PFAM:PF00440"
/note="FtsZ binding protein; synthetically lethal with a
defect in the Min system; this protein is the first
identified nucleoid occlusion factor which works along
with the Min system to properly position the FtsZ ring
assembly"
/codon_start=1
/transl_table=11
/product="nucleoid occlusion protein"
/protein_id="YP_003034349.1"
/db_xref="GI:253771518"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8160290"
/translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERN
PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLAS
QILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
misc_feature complement(91004..91588)
/gene="slmA"
/locus_tag="ECBD_0085"
/note="division inhibitor protein; Provisional; Region:
slmA; PRK09480"
/db_xref="CDD:181894"
misc_feature complement(91403..91531)
/gene="slmA"
/locus_tag="ECBD_0085"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene complement(91695..92153)
/gene="dut"
/locus_tag="ECBD_0086"
/db_xref="GeneID:8160373"
CDS complement(91695..92153)
/gene="dut"
/locus_tag="ECBD_0086"
/inference="protein motif:TFAM:TIGR00576"
/note="catalyzes the formation of dUMP from dUTP"
/codon_start=1
/transl_table=11
/product="deoxyuridine 5'-triphosphate
nucleotidohydrolase"
/protein_id="YP_003034350.1"
/db_xref="GI:253771519"
/db_xref="InterPro:IPR008180"
/db_xref="InterPro:IPR008181"
/db_xref="GeneID:8160373"
/translation="MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELA
PGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVW
NRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ"
misc_feature complement(91788..92069)
/gene="dut"
/locus_tag="ECBD_0086"
/note="Trimeric dUTP diphosphatases; Region:
trimeric_dUTPase; cd07557"
/db_xref="CDD:143638"
misc_feature complement(order(91797..91799,91809..91811,91818..91832,
91842..91844,91848..91850,91854..91856,91860..91862,
91881..91883,91890..91892,91908..91916,91932..91949,
91953..91955,92004..92006,92010..92015,92028..92030,
92064..92069))
/gene="dut"
/locus_tag="ECBD_0086"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:143638"
misc_feature complement(order(91860..91865,91875..91877,91884..91892,
91935..91943))
/gene="dut"
/locus_tag="ECBD_0086"
/note="active site"
/db_xref="CDD:143638"
gene complement(92131..93351)
/locus_tag="ECBD_0087"
/db_xref="GeneID:8156337"
CDS complement(92131..93351)
/locus_tag="ECBD_0087"
/EC_number="6.3.2.5"
/inference="protein motif:TFAM:TIGR00521"
/note="catalyzes the conjugation of cysteine to
4'-phosphopantothenate to form
4-phosphopantothenoylcysteine, which is then
decarboxylated to form 4'-phosphopantotheine"
/codon_start=1
/transl_table=11
/product="bifunctional phosphopantothenoylcysteine
decarboxylase/phosphopantothenate synthase"
/protein_id="YP_003034351.1"
/db_xref="GI:253771520"
/db_xref="InterPro:IPR003382"
/db_xref="InterPro:IPR005252"
/db_xref="InterPro:IPR007085"
/db_xref="GeneID:8156337"
/translation="MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAK
AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGM
ANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGD
IGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGF
AIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAA
VADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNV
EEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLL
LDEIVTRYDEKNRR"
misc_feature complement(92215..93351)
/locus_tag="ECBD_0087"
/note="bifunctional phosphopantothenoylcysteine
decarboxylase/phosphopantothenate synthase; Validated;
Region: PRK05579"
/db_xref="CDD:235513"
misc_feature complement(92950..93336)
/locus_tag="ECBD_0087"
/note="Flavoprotein; Region: Flavoprotein; pfam02441"
/db_xref="CDD:217035"
misc_feature complement(92236..92796)
/locus_tag="ECBD_0087"
/note="DNA / pantothenate metabolism flavoprotein; Region:
DFP; pfam04127"
/db_xref="CDD:217913"
gene 93523..94191
/gene="radC"
/locus_tag="ECBD_0088"
/db_xref="GeneID:8156338"
CDS 93523..94191
/gene="radC"
/locus_tag="ECBD_0088"
/inference="protein motif:TFAM:TIGR00608"
/note="Involved in DNA double-strand break repair and
recombination. Promotes the annealing of complementary
single-stranded DNA and by simulation of RAD51
recombinase"
/codon_start=1
/transl_table=11
/product="DNA repair protein RadC"
/protein_id="YP_003034352.1"
/db_xref="GI:253771521"
/db_xref="InterPro:IPR001405"
/db_xref="GeneID:8156338"
/translation="MKNNAQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTL
AKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLL
SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAI
KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGKYVSFAE
RGWI"
misc_feature 93544..94188
/gene="radC"
/locus_tag="ECBD_0088"
/note="hypothetical protein; Reviewed; Region: PRK00024"
/db_xref="CDD:178801"
misc_feature 93835..94173
/gene="radC"
/locus_tag="ECBD_0088"
/note="Mov34/MPN/PAD-1 family; Region: MPN_DUF2466;
cd08071"
/db_xref="CDD:163702"
misc_feature order(93883..93885,94033..94035,94039..94041,94063..94065,
94072..94074)
/gene="radC"
/locus_tag="ECBD_0088"
/note="MPN+ (JAMM) motif; other site"
/db_xref="CDD:163702"
misc_feature order(94033..94035,94039..94041,94072..94074)
/gene="radC"
/locus_tag="ECBD_0088"
/note="Zinc-binding site [ion binding]; other site"
/db_xref="CDD:163702"
gene 94408..94644
/gene="rpmB"
/locus_tag="ECBD_0089"
/db_xref="GeneID:8156339"
CDS 94408..94644
/gene="rpmB"
/locus_tag="ECBD_0089"
/inference="protein motif:TFAM:TIGR00009"
/note="required for 70S ribosome assembly"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L28"
/protein_id="YP_003034353.1"
/db_xref="GI:253771522"
/db_xref="InterPro:IPR001383"
/db_xref="GeneID:8156339"
/translation="MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEK
RFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY"
misc_feature 94408..94635
/gene="rpmB"
/locus_tag="ECBD_0089"
/note="50S ribosomal protein L28; Reviewed; Region: rpmB;
PRK00359"
/db_xref="CDD:234736"
gene 94665..94832
/gene="rpmG"
/locus_tag="ECBD_0090"
/db_xref="GeneID:8156340"
CDS 94665..94832
/gene="rpmG"
/locus_tag="ECBD_0090"
/inference="protein motif:TFAM:TIGR01023"
/note="in Escherichia coli BM108, a mutation that results
in lack of L33 synthesis had no effect on ribosome
synthesis or function; there are paralogous genes in
several bacterial genomes, and a CXXC motif for zinc
binding and an upstream regulation region of the paralog
lacking this motif that are regulated by zinc similar to
other ribosomal proteins like L31; the proteins in this
group lack the CXXC motif"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L33"
/protein_id="YP_003034354.1"
/db_xref="GI:253771523"
/db_xref="InterPro:IPR001705"
/db_xref="GeneID:8156340"
/translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
QHVIYKEAKIK"
misc_feature 94665..94823
/gene="rpmG"
/locus_tag="ECBD_0090"
/note="50S ribosomal protein L33; Validated; Region: rpmG;
PRK00595"
/db_xref="CDD:179075"
gene 94930..95739
/locus_tag="ECBD_0091"
/db_xref="GeneID:8156341"
CDS 94930..95739
/locus_tag="ECBD_0091"
/EC_number="3.2.2.23"
/inference="protein motif:TFAM:TIGR00577"
/note="Involved in base excision repair of DNA damaged by
oxidation or by mutagenic agents. Acts as DNA glycosylase
that recognizes and removes damaged bases"
/codon_start=1
/transl_table=11
/product="formamidopyrimidine-DNA glycosylase"
/protein_id="YP_003034355.1"
/db_xref="GI:253771524"
/db_xref="InterPro:IPR000191"
/db_xref="InterPro:IPR000214"
/db_xref="InterPro:IPR012319"
/db_xref="InterPro:IPR015886"
/db_xref="InterPro:IPR015887"
/db_xref="GeneID:8156341"
/translation="MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRL
SDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKV
LRYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMD
NKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK
DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK"
misc_feature 94930..95736
/locus_tag="ECBD_0091"
/note="formamidopyrimidine/5-formyluracil/
5-hydroxymethyluracil DNA glycosylase; Validated; Region:
PRK01103"
/db_xref="CDD:234899"
misc_feature 94933..95277
/locus_tag="ECBD_0091"
/note="N-terminal domain of Escherichia coli Fpg1/MutM and
related bacterial DNA glycosylases; Region: EcFpg-like_N;
cd08966"
/db_xref="CDD:176800"
misc_feature order(94933..94938,95098..95100,95140..95142,95146..95154,
95194..95199,95251..95262)
/locus_tag="ECBD_0091"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:176800"
misc_feature 94933..94935
/locus_tag="ECBD_0091"
/note="catalytic residue [active]"
/db_xref="CDD:176800"
misc_feature order(94936..94947,94951..94956,94963..94965,95089..95100,
95152..95154)
/locus_tag="ECBD_0091"
/note="H2TH interface [polypeptide binding]; other site"
/db_xref="CDD:176800"
misc_feature order(94936..94938,95098..95100)
/locus_tag="ECBD_0091"
/note="putative catalytic residues [active]"
/db_xref="CDD:176800"
misc_feature 95140..95142
/locus_tag="ECBD_0091"
/note="turnover-facilitating residue; other site"
/db_xref="CDD:176800"
misc_feature order(95149..95151,95254..95256,95260..95262)
/locus_tag="ECBD_0091"
/note="intercalation triad [nucleotide binding]; other
site"
/db_xref="CDD:176800"
misc_feature 95152..95154
/locus_tag="ECBD_0091"
/note="8OG recognition residue [nucleotide binding]; other
site"
/db_xref="CDD:176800"
misc_feature order(95197..95199,95257..95259)
/locus_tag="ECBD_0091"
/note="putative reading head residues; other site"
/db_xref="CDD:176800"
misc_feature 95314..95589
/locus_tag="ECBD_0091"
/note="Formamidopyrimidine-DNA glycosylase H2TH domain;
Region: H2TH; pfam06831"
/db_xref="CDD:115485"
misc_feature 95650..95736
/locus_tag="ECBD_0091"
/note="Zinc finger found in FPG and IleRS; Region:
zf-FPG_IleRS; pfam06827"
/db_xref="CDD:203527"
gene complement(95778..96257)
/gene="coaD"
/locus_tag="ECBD_0092"
/db_xref="GeneID:8156342"
CDS complement(95778..96257)
/gene="coaD"
/locus_tag="ECBD_0092"
/EC_number="2.7.7.3"
/inference="protein motif:TFAM:TIGR01510"
/note="Catalyzes the conversion of ATP and pantetheine
4'-phosphate to diphosphate and 3'-dephospho-coA"
/codon_start=1
/transl_table=11
/product="phosphopantetheine adenylyltransferase"
/protein_id="YP_003034356.1"
/db_xref="GI:253771525"
/db_xref="InterPro:IPR001980"
/db_xref="InterPro:IPR004820"
/db_xref="InterPro:IPR004821"
/db_xref="GeneID:8156342"
/translation="MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKP
MFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQL
AHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA"
misc_feature complement(95781..96251)
/gene="coaD"
/locus_tag="ECBD_0092"
/note="phosphopantetheine adenylyltransferase;
Provisional; Region: coaD; PRK00168"
/db_xref="CDD:234674"
misc_feature complement(95790..96248)
/gene="coaD"
/locus_tag="ECBD_0092"
/note="Phosphopantetheine adenylyltransferase; Region:
PPAT; cd02163"
/db_xref="CDD:173914"
misc_feature complement(order(95877..95879,95886..95888,95898..95900,
95940..95942,95952..95954,95961..95966,95985..95987,
95991..95996,96036..96044,96132..96134,96147..96149,
96195..96197,96204..96209,96225..96239))
/gene="coaD"
/locus_tag="ECBD_0092"
/note="active site"
/db_xref="CDD:173914"
misc_feature complement(96204..96215)
/gene="coaD"
/locus_tag="ECBD_0092"
/note="(T/H)XGH motif; other site"
/db_xref="CDD:173914"
gene complement(96265..97542)
/locus_tag="ECBD_0093"
/db_xref="GeneID:8156343"
CDS complement(96265..97542)
/locus_tag="ECBD_0093"
/inference="protein motif:PFAM:PF04413"
/note="catalyzes the transfer of
2-keto-3-deoxy-D-manno-octulosonic acid to lipid A"
/codon_start=1
/transl_table=11
/product="3-deoxy-D-manno-octulosonic-acid transferase"
/protein_id="YP_003034357.1"
/db_xref="GI:253771526"
/db_xref="InterPro:IPR001296"
/db_xref="InterPro:IPR007507"
/db_xref="GeneID:8156343"
/translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRH
PLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQ
HVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSA
AGYAKLGKFVRRLLRRITLIAAQNEEDGARFVSLGAKNNQVTVTGSLKFDISVTPQLA
AKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPD
AINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
NPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATTLAKEVSSLLTDADYRS
FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
misc_feature complement(96337..97494)
/locus_tag="ECBD_0093"
/note="3-deoxy-D-manno-octulosonic-acid transferase;
Reviewed; Region: PRK05749"
/db_xref="CDD:235589"
misc_feature complement(96904..97452)
/locus_tag="ECBD_0093"
/note="3-Deoxy-D-manno-octulosonic-acid transferase
(kdotransferase); Region: Glycos_transf_N; pfam04413"
/db_xref="CDD:218074"
misc_feature complement(96340..>96642)
/locus_tag="ECBD_0093"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region:
Glycosyltransferase_GTB_type; cl10013"
/db_xref="CDD:245227"
gene 97991..99013
/locus_tag="ECBD_0094"
/db_xref="GeneID:8156344"
CDS 97991..99013
/locus_tag="ECBD_0094"
/inference="protein motif:TFAM:TIGR02201"
/note="TIGRFAM: lipopolysaccharide heptosyltransferase
III;
PFAM: glycosyl transferase family 9;
KEGG: sdy:SDY_4062 lipopolysaccharide core biosynthesis
protein"
/codon_start=1
/transl_table=11
/product="lipopolysaccharide core biosynthesis protein"
/protein_id="YP_003034358.1"
/db_xref="GI:253771527"
/db_xref="InterPro:IPR002201"
/db_xref="InterPro:IPR011916"
/db_xref="GeneID:8156344"
/translation="MRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEI
NALYGIKNKKAKASEKIANFFHLIKVLRANKYDLIVNLTDQWMVAILVRLLNARVKIS
QDYHHRQSAFWRKSFTHLVPLQGGNVVESNLSVLTPLGLDSLVKQTTMSYPPASWKRM
RRELDHAGVGQNYVVIQPTARQIFKCWDNAKFSAVIDALHARGYEVVLTSGPDKDDLA
CVNEIAQGCQTPPVTALAGKVTFPELGALIDHAQLFIGVDSAPAHIAAAVNTPLISLF
GATDHIFWRPWSNNMIQFWAGDYREMPTRDQRDRNEMYLSAIPAADVIAAVDKLLPSS
TTGTSL"
misc_feature 97991..99010
/locus_tag="ECBD_0094"
/note="lipopolysaccharide core biosynthesis protein;
Provisional; Region: PRK10422"
/db_xref="CDD:182447"
misc_feature 97991..98905
/locus_tag="ECBD_0094"
/note="Lipopolysaccharide heptosyltransferase is involved
in the biosynthesis of lipooligosaccharide (LOS).
Lipopolysaccharide (LPS) is a major component of the outer
membrane of gram-negative bacteria. LPS
heptosyltransferase transfers heptose molecules from...;
Region: GT1_LPS_heptosyltransferase; cd03789"
/db_xref="CDD:99964"
misc_feature order(98516..98521,98615..98617,98720..98725,98759..98761,
98768..98773,98780..98782)
/locus_tag="ECBD_0094"
/note="putative active site [active]"
/db_xref="CDD:99964"
gene 99010..100134
/locus_tag="ECBD_0095"
/db_xref="GeneID:8156345"
CDS 99010..100134
/locus_tag="ECBD_0095"
/inference="protein motif:PFAM:PF00534"
/note="PFAM: glycosyl transferase group 1;
KEGG: sfv:SFV_3900 LPS alpha1,3-glucosyltransferase"
/codon_start=1
/transl_table=11
/product="glycosyl transferase group 1"
/protein_id="YP_003034359.1"
/db_xref="GI:253771528"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:8156345"
/translation="MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGE
CPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVC
YAEKVAQEKGFFYRLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE
RFHILPPGIYPDRKYNQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEAL
ASLPDSLRHNTLLYVVGQDKPRKFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLH
PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAIAEPFRQETLNEILRKA
LTQSSLRQAWAENARHYADTQDLYSLPEKAADIITGGLDG"
misc_feature 99010..100113
/locus_tag="ECBD_0095"
/note="This family is most closely related to the GT1
family of glycosyltransferases and named after YqgM in
Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to...; Region:
GT1_YqgM_like; cd03801"
/db_xref="CDD:99974"
misc_feature 99010..100065
/locus_tag="ECBD_0095"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:223515"
gene 100127..100924
/locus_tag="ECBD_0096"
/db_xref="GeneID:8156346"
CDS 100127..100924
/locus_tag="ECBD_0096"
/inference="protein motif:PFAM:PF06293"
/note="PFAM: lipopolysaccharide kinase;
KEGG: sdy:SDY_4060 LPS biosynthesis enzyme"
/codon_start=1
/transl_table=11
/product="lipopolysaccharide kinase"
/protein_id="YP_003034360.1"
/db_xref="GI:253771529"
/db_xref="InterPro:IPR010440"
/db_xref="GeneID:8156346"
/translation="MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAG
KSYFLKWHRGTTLKEIIKNLLSLRMPVLGADREWNAIHRLRDVGVDTMYGVAFGEKGI
NPLTRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVATMVRDMHAAGINH
RDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRVPRRWRDKDLIGLYFSSMNIGL
TQRDIWRFMKVYFAAPLKDILKQEQGLLSQAEAKATKIRERTIRKSL"
misc_feature 100127..100921
/locus_tag="ECBD_0096"
/note="lipopolysaccharide core heptose(I) kinase RfaP;
Provisional; Region: PRK15123"
/db_xref="CDD:237915"
gene 100940..101956
/locus_tag="ECBD_0097"
/db_xref="GeneID:8156347"
CDS 100940..101956
/locus_tag="ECBD_0097"
/EC_number="2.4.1.44"
/inference="protein motif:PRIAM:2.4.1.44"
/note="PFAM: glycosyl transferase family 8; glycosyl
transferase family 8 domain protein;
KEGG: sbo:SBO_3631
UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,
3-D-galactosylt ransferase"
/codon_start=1
/transl_table=11
/product="Lipopolysaccharide
3-alpha-galactosyltransferase"
/protein_id="YP_003034361.1"
/db_xref="GI:253771530"
/db_xref="InterPro:IPR002495"
/db_xref="InterPro:IPR013645"
/db_xref="GeneID:8156347"
/translation="MSAHYFNPQEMINKTIIFDERPAASVASSFHVAYGIDKNFLFGC
GVSITSVLLHNNDVSFVFHVFIDDIPEADIQRLAQLAKSYRTCIQIHLVNCERLKALP
TTKNWSIAMYFRFVIADYFIDQQDKILYLDADIACQGNLKPLITMDLANNVAAVVTER
DANWWSLRGQSLQCNELEKGYFNSGVLLINTLAWAQESVSAKAMSMLADKAIVSRLTY
MDQDILNLILLGKVKFIDAKYNTQFSLNYELKKSFVCPINDETVLIHYVGPTKPWHYW
AGYPSAQPFIKAKEASPWKNEPLMRPVNSNYARYCAKHNFKQNKPINGIMNYIYYFYL
KIIK"
misc_feature 100949..101950
/locus_tag="ECBD_0097"
/note="lipopolysaccharide 1,3-galactosyltransferase;
Provisional; Region: PRK15171"
/db_xref="CDD:185093"
misc_feature 101027..101764
/locus_tag="ECBD_0097"
/note="A4GalT_like proteins catalyze the addition of
galactose or glucose residues to the lipooligosaccharide
(LOS) or lipopolysaccharide (LPS) of the bacterial cell
surface; Region: GT8_A4GalT_like; cd04194"
/db_xref="CDD:133037"
misc_feature order(101042..101050,101054..101059,101270..101272,
101279..101281,101333..101341,101420..101422,
101486..101494,101597..101602,101666..101668,
101732..101734,101738..101743,101750..101752)
/locus_tag="ECBD_0097"
/note="Ligand binding site; other site"
/db_xref="CDD:133037"
misc_feature order(101333..101335,101339..101341,101732..101734)
/locus_tag="ECBD_0097"
/note="metal-binding site"
/db_xref="CDD:133037"
misc_feature 101774..101944
/locus_tag="ECBD_0097"
/note="Glycosyl transferase family 8 C-terminal; Region:
Glyco_transf_8C; pfam08437"
/db_xref="CDD:149484"
gene 102527..102802
/locus_tag="ECBD_0099"
/db_xref="GeneID:8156349"
CDS 102527..102802
/locus_tag="ECBD_0099"
/inference="protein motif:PFAM:PF03811"
/note="PFAM: Insertion element protein;
KEGG: dps:DP0861 insertion element iso-IS1d protein
(InsA)"
/codon_start=1
/transl_table=11
/product="Insertion element protein"
/protein_id="YP_003034362.1"
/db_xref="GI:253771531"
/db_xref="InterPro:IPR003220"
/db_xref="GeneID:8156349"
/translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR"
misc_feature 102527..102799
/locus_tag="ECBD_0099"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3677"
/db_xref="CDD:226202"
misc_feature 102527..102634
/locus_tag="ECBD_0099"
/note="InsA N-terminal domain; Region: Zn_Tnp_IS1;
pfam03811"
/db_xref="CDD:190760"
misc_feature 102641..102790
/locus_tag="ECBD_0099"
/note="InsA C-terminal domain; Region: HTH_Tnp_IS1;
pfam12759"
/db_xref="CDD:193235"
gene 102721..103224
/locus_tag="ECBD_0100"
/db_xref="GeneID:8156350"
CDS 102721..103224
/locus_tag="ECBD_0100"
/inference="protein motif:PFAM:PF03400"
/note="PFAM: IS1 transposase;
KEGG: dps:DP0860 insertion element IS1 1/5/6 protein
(InsB)"
/codon_start=1
/transl_table=11
/product="IS1 transposase"
/protein_id="YP_003034363.1"
/db_xref="GI:253771532"
/db_xref="InterPro:IPR005063"
/db_xref="GeneID:8156350"
/translation="MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature 102829..103221
/locus_tag="ECBD_0100"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:112225"
gene 103754..104446
/locus_tag="ECBD_0101"
/db_xref="GeneID:8156351"
CDS 103754..104446
/locus_tag="ECBD_0101"
/inference="protein motif:PFAM:PF06176"
/note="PFAM: lipopolysaccharide core biosynthesis protein;
KEGG: sdy:SDY_4057 lipopolysaccharide core biosynthesis
protein"
/codon_start=1
/transl_table=11
/product="lipopolysaccharide core biosynthesis protein"
/protein_id="YP_003034364.1"
/db_xref="GI:253771533"
/db_xref="InterPro:IPR009330"
/db_xref="GeneID:8156351"
/translation="MITSIRYRGFSFYYKDNDNKYKEIFDEILAYNFKTVKVLRNIDD
TKVSLIDTKYGRYVFKVFAPKTKRNERFLKSFVKGDYYQNLIVETDRVRSAGLTFPND
FYFLAERKIFNYASVFIMLIEYVEGVELNDMPIIPENIKAEIKASMEKLHALNMLSGD
PHRGNFIVSKDGVRIIDLSGKSCTAERKARDRLAMERHLGIANEIKDYGYYSVIYRTK
LRKFIKKLKGKA"
misc_feature 103754..104404
/locus_tag="ECBD_0101"
/note="Lipopolysaccharide core biosynthesis protein
(WaaY); Region: WaaY; pfam06176"
/db_xref="CDD:114869"
gene 104472..105497
/locus_tag="ECBD_0102"
/db_xref="GeneID:8156352"
CDS 104472..105497
/locus_tag="ECBD_0102"
/EC_number="2.4.1.58"
/inference="protein motif:PRIAM:2.4.1.58"
/note="PFAM: glycosyl transferase family 8; glycosyl
transferase family 8 domain protein;
KEGG: ssn:SSON_3781 UDP-galactose:(galactosyl) LPS
alpha1,2-galactosyltransferase"
/codon_start=1
/transl_table=11
/product="Lipopolysaccharide glucosyltransferase I"
/protein_id="YP_003034365.1"
/db_xref="GI:253771534"
/db_xref="InterPro:IPR002495"
/db_xref="InterPro:IPR013645"
/db_xref="GeneID:8156352"
/translation="MDLLAESITEIAVSGEIANTDRVLNIAYGIDRNFLFGAAVSMQS
VVMHNPDLAVKFHLFTDYIDEDYLQRVNAFTSKNANAEVRIYKVSNAFIDIFPSLKQW
SYATFFRLVAFQYLSETIENLLYIDADVICKGSLAGLLDINFDGDKFAAVIKDVPFMQ
EKPAKRLAIEGLPGNYFNAGVVYLQLEAWAKNDFMNKAIAMLASDPQHTKYKCLDQDI
LNILFFGHCIFISGDYDCFYGIDYELENKSDEDYKKTITDDTKLIHYVGVTKPWNDWT
NYPCQKYFNEAYQASCWNDVAFIPATNEKQYQVKYQHAKKNGDTFNAFIYFIKFKLNK
YKRKLFG"
misc_feature 104538..105491
/locus_tag="ECBD_0102"
/note="lipopolysaccharide 1,3-galactosyltransferase;
Provisional; Region: PRK15171"
/db_xref="CDD:185093"
misc_feature 104541..105293
/locus_tag="ECBD_0102"
/note="A4GalT_like proteins catalyze the addition of
galactose or glucose residues to the lipooligosaccharide
(LOS) or lipopolysaccharide (LPS) of the bacterial cell
surface; Region: GT8_A4GalT_like; cd04194"
/db_xref="CDD:133037"
misc_feature order(104556..104564,104568..104573,104787..104789,
104796..104798,104850..104858,104934..104936,
105003..105011,105114..105119,105183..105185,
105261..105263,105267..105272,105279..105281)
/locus_tag="ECBD_0102"
/note="Ligand binding site; other site"
/db_xref="CDD:133037"
misc_feature order(104850..104852,104856..104858,105261..105263)
/locus_tag="ECBD_0102"
/note="metal-binding site"
/db_xref="CDD:133037"
misc_feature 105303..105473
/locus_tag="ECBD_0102"
/note="Glycosyl transferase family 8 C-terminal; Region:
Glyco_transf_8C; pfam08437"
/db_xref="CDD:149484"
gene 105582..106565
/locus_tag="ECBD_0103"
/db_xref="GeneID:8156353"
CDS 105582..106565
/locus_tag="ECBD_0103"
/inference="protein motif:PFAM:PF00535"
/note="PFAM: glycosyl transferase family 2;
KEGG: ssn:SSON_3782 beta1,3-glucosyltransferase"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family 2"
/protein_id="YP_003034366.1"
/db_xref="GI:253771535"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:8156353"
/translation="MSNDYPLVSIIIPTYNSSDYITETLTKLEKQTYPNFEIVIVNDG
SKDNTSNVLREYGLTHSRLIIINKENGGVSSARNTGIRKAQGQFICFMDDDDEIDPNY
LLKMYTRQHETGGDAIYCGLYGHYIKDGVTYSPINTEFNEGSLLFDFFYKKVRFHIGC
LFIRKQLLEENNLFFDEDLRLGEDLDFIYRLLITCDMYAVPYYMYKHNYRENSLMNSC
RTITHYRHESFAHERIYSSVMQLYKGNRKEEIHTLLSQNRAYHKTRYLWNVLLNGDFE
LLNQLVESNEKELNDCNLSGKRDKRRAKILASKNYILWRMVRLVNRKKNKR"
misc_feature 105591..106448
/locus_tag="ECBD_0103"
/note="Glycosyltransferases involved in cell wall
biogenesis [Cell envelope biogenesis, outer membrane];
Region: WcaA; COG0463"
/db_xref="CDD:223539"
misc_feature 105609..106181
/locus_tag="ECBD_0103"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cd00761"
/db_xref="CDD:132997"
misc_feature order(105618..105620,105624..105626,105702..105704,
105858..105860,105864..105866)
/locus_tag="ECBD_0103"
/note="active site"
/db_xref="CDD:132997"
gene 106611..107864
/locus_tag="ECBD_0104"
/db_xref="GeneID:8156354"
CDS 106611..107864
/locus_tag="ECBD_0104"
/inference="protein motif:PFAM:PF04932"
/note="PFAM: O-antigen polymerase;
KEGG: ssn:SSON_3783 lipid A-core, surface polymer ligase"
/codon_start=1
/transl_table=11
/product="O-antigen polymerase"
/protein_id="YP_003034367.1"
/db_xref="GI:253771536"
/db_xref="InterPro:IPR007016"
/db_xref="GeneID:8156354"
/translation="MSFCWNEINSGIKSLILILCIFSLMTLSLWDDVATKFLHAAGII
SALYFLMTPKKTITNNPTLLIFISLCLLGIINIIWYSHYKVSGSVYTNAYRGPMETGK
IALCSAFIFLVLFAKNELRTKIKFGKLILFASLATQLLFFAHAMWQHFYLNVDRVALS
ASHATTAGYIILFPSLLASILILKSDFRHKTTLYTINFMLSLCAVIVTETRAAILVFP
FFALLLIVMDSYINKRINYKLYCFIAIALLAGVFSFKDTLLMRMNDLNNDLVNYSHDN
TRTSVGARVAMYEVGLKTYSPIGQSLEKRAEKIHELEEKEPRLSGALPYIDSHLHNDL
IDTLSTRGIPGVVLTILAFSAILIYALRTAKEPYILILLFSLLVVGLSDVILFSKPVP
TAVFVTIILLCAYFKAQSDQCLLDK"
misc_feature 107196..107660
/locus_tag="ECBD_0104"
/note="O-Antigen ligase; Region: Wzy_C; pfam04932"
/db_xref="CDD:218334"
gene complement(107934..108914)
/locus_tag="ECBD_0105"
/db_xref="GeneID:8156355"
CDS complement(107934..108914)
/locus_tag="ECBD_0105"
/inference="protein motif:TFAM:TIGR02193"
/note="TIGRFAM: lipopolysaccharide heptosyltransferase I;
PFAM: glycosyl transferase family 9;
KEGG: sbc:SbBS512_E4048 lipopolysaccharide
heptosyltransferase I"
/codon_start=1
/transl_table=11
/product="ADP-heptose:LPS heptosyl transferase I"
/protein_id="YP_003034368.1"
/db_xref="GI:253771537"
/db_xref="InterPro:IPR002201"
/db_xref="InterPro:IPR011908"
/db_xref="GeneID:8156355"
/translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQI
PSWHAAVERVIPVAIRRWRKAWFSAPIKVERKAFREALQAENYDAVIDAQGLVKSAAL
VTRLAHGVKHGLDWQTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQ
GDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLAASGIRIKLPWG
APHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNI
TVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKRFIEENAENAAMI"
misc_feature complement(107961..108914)
/locus_tag="ECBD_0105"
/note="ADP-heptose:LPS heptosyltransferase [Cell envelope
biogenesis, outer membrane]; Region: RfaF; COG0859"
/db_xref="CDD:223928"
misc_feature complement(108042..108911)
/locus_tag="ECBD_0105"
/note="Lipopolysaccharide heptosyltransferase is involved
in the biosynthesis of lipooligosaccharide (LOS).
Lipopolysaccharide (LPS) is a major component of the outer
membrane of gram-negative bacteria. LPS
heptosyltransferase transfers heptose molecules from...;
Region: GT1_LPS_heptosyltransferase; cd03789"
/db_xref="CDD:99964"
misc_feature complement(order(108114..108116,108123..108128,
108135..108137,108171..108176,108267..108269,
108363..108368))
/locus_tag="ECBD_0105"
/note="putative active site [active]"
/db_xref="CDD:99964"
gene complement(108918..109964)
/locus_tag="ECBD_0106"
/db_xref="GeneID:8156356"
CDS complement(108918..109964)
/locus_tag="ECBD_0106"
/inference="protein motif:TFAM:TIGR02195"
/note="catalyzes the transfer of the second heptose to the
heptosyl-KDO2 moiety of the lipopolysaccharide inner core"
/codon_start=1
/transl_table=11
/product="ADP-heptose:LPS heptosyltransferase II"
/protein_id="YP_003034369.1"
/db_xref="GI:253771538"
/db_xref="InterPro:IPR002201"
/db_xref="InterPro:IPR011910"
/db_xref="GeneID:8156356"
/translation="MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPL
LSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGI
PHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYVALAYDKGVMRTAQDLPKPLLWPQL
QVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVL
FGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVA
AALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQR
VLEELNALLLQEEV"
misc_feature complement(108960..109964)
/locus_tag="ECBD_0106"
/note="ADP-heptose:LPS heptosyltransferase [Cell envelope
biogenesis, outer membrane]; Region: RfaF; COG0859"
/db_xref="CDD:223928"
misc_feature complement(108960..109961)
/locus_tag="ECBD_0106"
/note="Lipopolysaccharide heptosyltransferase is involved
in the biosynthesis of lipooligosaccharide (LOS).
Lipopolysaccharide (LPS) is a major component of the outer
membrane of gram-negative bacteria. LPS
heptosyltransferase transfers heptose molecules from...;
Region: GT1_LPS_heptosyltransferase; cd03789"
/db_xref="CDD:99964"
misc_feature complement(order(109140..109142,109149..109154,
109161..109163,109197..109202,109308..109310,
109404..109409))
/locus_tag="ECBD_0106"
/note="putative active site [active]"
/db_xref="CDD:99964"
gene complement(109974..110906)
/gene="rfaD"
/locus_tag="ECBD_0107"
/db_xref="GeneID:8156357"
CDS complement(109974..110906)
/gene="rfaD"
/locus_tag="ECBD_0107"
/inference="protein motif:TFAM:TIGR02197"
/note="catalyzes the interconversion between
ADP-D-glycero-beta-D-manno-heptose and
ADP-L-glycero-beta-D-manno-heptose"
/codon_start=1
/transl_table=11
/product="ADP-L-glycero-D-mannoheptose-6-epimerase"
/protein_id="YP_003034370.1"
/db_xref="GI:253771539"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002225"
/db_xref="InterPro:IPR005913"
/db_xref="InterPro:IPR011912"
/db_xref="GeneID:8156357"
/translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD
LNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLH
YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
DVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFT
QADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA"
misc_feature complement(109983..110906)
/gene="rfaD"
/locus_tag="ECBD_0107"
/note="ADP-L-glycero-D-mannoheptose 6-epimerase (GME),
extended (e) SDRs; Region: ADP_GME_SDR_e; cd05248"
/db_xref="CDD:187559"
misc_feature complement(109983..110906)
/gene="rfaD"
/locus_tag="ECBD_0107"
/note="ADP-L-glycero-D-mannoheptose-6-epimerase;
Provisional; Region: rfaD; PRK11150"
/db_xref="CDD:182998"
misc_feature complement(order(110373..110378,110397..110399,
110403..110408,110475..110477,110487..110489,
110559..110567,110619..110621,110631..110633,
110643..110645,110670..110672,110676..110684,
110748..110750,110793..110795,110811..110819,
110874..110882,110889..110894))
/gene="rfaD"
/locus_tag="ECBD_0107"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187559"
misc_feature complement(order(110448..110450,110457..110462,
110469..110471,110481..110483,110490..110504,
110514..110516,110613..110615,110625..110627,
110637..110639,110646..110657,110751..110753,
110757..110774,110778..110783,110790..110792,
110796..110801,110805..110810))
/gene="rfaD"
/locus_tag="ECBD_0107"
/note="homopentamer interface [polypeptide binding]; other
site"
/db_xref="CDD:187559"
misc_feature complement(order(110178..110180,110280..110282,
110346..110348,110355..110357,110361..110369,
110400..110402,110664..110666))
/gene="rfaD"
/locus_tag="ECBD_0107"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187559"
misc_feature complement(order(110475..110477,110487..110489,
110559..110561,110628..110630))
/gene="rfaD"
/locus_tag="ECBD_0107"
/note="active site"
/db_xref="CDD:187559"
gene 111120..112316
/locus_tag="ECBD_0108"
/db_xref="GeneID:8156358"
CDS 111120..112316
/locus_tag="ECBD_0108"
/EC_number="2.3.1.29"
/inference="protein motif:TFAM:TIGR01822"
/note="catalyzes the formation of 2-amino-3-oxobutanoate
from acetyl-CoA and glycine"
/codon_start=1
/transl_table=11
/product="2-amino-3-ketobutyrate coenzyme A ligase"
/protein_id="YP_003034371.1"
/db_xref="GI:253771540"
/db_xref="InterPro:IPR000192"
/db_xref="InterPro:IPR001917"
/db_xref="InterPro:IPR004839"
/db_xref="InterPro:IPR005814"
/db_xref="InterPro:IPR011282"
/db_xref="GeneID:8156358"
/translation="MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
INFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM
EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQE
LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS
LAPAIVAASIKVLEMVEAGSELRDRLWANARQFRGQMSAAGFTLAGADHAIIPVMLGD
AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK
QLGVIA"
misc_feature 111144..112310
/locus_tag="ECBD_0108"
/note="pyridoxal phosphate-dependent acyltransferase,
putative; Region: gly_Cac_T_rel; TIGR01825"
/db_xref="CDD:130884"
misc_feature 111243..112292
/locus_tag="ECBD_0108"
/note="KBL_like; this family belongs to the pyridoxal
phosphate (PLP)-dependent aspartate aminotransferase
superfamily (fold I). The major groups in this CD
corresponds to serine palmitoyltransferase (SPT),
5-aminolevulinate synthase (ALAS); Region: KBL_like;
cd06454"
/db_xref="CDD:99747"
misc_feature order(111267..111269,111447..111455,111525..111527,
111660..111662,111672..111677,111747..111749,
111753..111758,111840..111842,111849..111851,
112221..112223)
/locus_tag="ECBD_0108"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:99747"
misc_feature order(111447..111455,111525..111527,111660..111662,
111672..111674,111747..111749,111753..111758,
111840..111842,111849..111851)
/locus_tag="ECBD_0108"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99747"
misc_feature 111849..111851
/locus_tag="ECBD_0108"
/note="catalytic residue [active]"
/db_xref="CDD:99747"
gene 112326..113351
/gene="tdh"
/locus_tag="ECBD_0109"
/db_xref="GeneID:8156359"
CDS 112326..113351
/gene="tdh"
/locus_tag="ECBD_0109"
/inference="protein motif:TFAM:TIGR00692"
/note="converts threonine and NAD to
1,2-amino-3-oxobutanoate and NADH; functions in threonine
catabolism"
/codon_start=1
/transl_table=11
/product="L-threonine 3-dehydrogenase"
/protein_id="YP_003034372.1"
/db_xref="GI:253771541"
/db_xref="InterPro:IPR002328"
/db_xref="InterPro:IPR004627"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:8156359"
/translation="MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHI
YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGG
RTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
DLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKE
NLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKV
IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSG
KVILSWD"
misc_feature 112326..113348
/gene="tdh"
/locus_tag="ECBD_0109"
/note="L-threonine 3-dehydrogenase; Validated; Region:
tdh; PRK05396"
/db_xref="CDD:180054"
misc_feature 112326..113339
/gene="tdh"
/locus_tag="ECBD_0109"
/note="Medium chain reductase/dehydrogenase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR; cl16912"
/db_xref="CDD:247637"
misc_feature order(112437..112445,112452..112454,112767..112769,
112779..112781,112836..112853,112908..112913,
112923..112925,112968..112970,113040..113045,
113109..113114,113181..113189)
/gene="tdh"
/locus_tag="ECBD_0109"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:176178"
gene 113590..114624
/locus_tag="ECBD_0110"
/db_xref="GeneID:8156360"
CDS 113590..114624
/locus_tag="ECBD_0110"
/inference="protein motif:PFAM:PF00535"
/note="PFAM: glycosyl transferase family 2"
/codon_start=1
/transl_table=11
/product="glycosyl transferase"
/protein_id="YP_003034373.1"
/db_xref="GI:253771542"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:8156360"
/translation="MMNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDG
STDNSVEIAKYYAENYPHVRLLHQANAGASVARNRGIEVATGKYVAFVDADDEVYPTM
YETLMTMALEDDLDVAQCNADWCFRETGETWQSIPTDRLRSTGVLTGPDWLRMGLSSR
RWTHVVWMGVYRRDVIVKNNIKFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLH
NTSVSRLHRQGNKNLNYQRHYIKITRLLEKLNRNYADKIMIYPEFHQQITYEALRVCH
AVRKEPDILTRQRMIAEIFTSGMYKRLITNVRSVKVGYQALLWSFRLWQWRDKTRSHH
RITRSAFNLR"
misc_feature 113590..114573
/locus_tag="ECBD_0110"
/note="putative glycosyl transferase; Provisional; Region:
PRK10073"
/db_xref="CDD:182223"
misc_feature 113617..>113970
/locus_tag="ECBD_0110"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cd00761"
/db_xref="CDD:132997"
misc_feature order(113626..113628,113632..113634,113710..113712,
113866..113868,113872..113874)
/locus_tag="ECBD_0110"
/note="active site"
/db_xref="CDD:132997"
gene complement(114611..115570)
/locus_tag="ECBD_0111"
/db_xref="GeneID:8156361"
CDS complement(114611..115570)
/locus_tag="ECBD_0111"
/inference="protein motif:PFAM:PF04748"
/note="PFAM: protein of unknown function DUF610 YibQ;
KEGG: sbc:SbBS512_E4043 polysaccharide deacetylase family
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034374.1"
/db_xref="GI:253771543"
/db_xref="InterPro:IPR006837"
/db_xref="GeneID:8156361"
/translation="MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVL
AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDE
IERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA
MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVL
QQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPV
YANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN"
sig_peptide complement(115499..115570)
/locus_tag="ECBD_0111"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.998 at
residue 24"
misc_feature complement(114860..115498)
/locus_tag="ECBD_0111"
/note="Putative catalytic domain of family 2
polysaccharide deacetylases (DACs) from bacteria; Region:
CE4_DAC2; cd10936"
/db_xref="CDD:200562"
misc_feature complement(order(114944..114946,114950..114952,
115115..115117,115202..115204,115208..115210,
115325..115339,115475..115486))
/locus_tag="ECBD_0111"
/note="NodB motif; other site"
/db_xref="CDD:200562"
misc_feature complement(order(114944..114946,115196..115204,
115337..115339,115475..115480))
/locus_tag="ECBD_0111"
/note="putative active site [active]"
/db_xref="CDD:200562"
misc_feature complement(order(114944..114946,115478..115480))
/locus_tag="ECBD_0111"
/note="putative catalytic site [active]"
/db_xref="CDD:200562"
misc_feature complement(order(115202..115204,115337..115339,
115475..115477))
/locus_tag="ECBD_0111"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:200562"
gene complement(115574..116833)
/locus_tag="ECBD_0112"
/db_xref="GeneID:8156362"
CDS complement(115574..116833)
/locus_tag="ECBD_0112"
/inference="protein motif:PFAM:PF01551"
/note="PFAM: peptidase M23"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034375.1"
/db_xref="GI:253771544"
/db_xref="InterPro:IPR016047"
/db_xref="GeneID:8156362"
/translation="MTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADERDQLKSIQ
ADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNAS
IAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQ
ETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESS
IQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEAMRKGTTYK
PTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIGASEGTEVK
AIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQPIALVGSS
GGQGRPSLYFEIRRQGQAVNPQPWLGR"
misc_feature complement(115577..116833)
/locus_tag="ECBD_0112"
/note="AmiB activator; Provisional; Region: PRK11637"
/db_xref="CDD:236942"
sig_peptide complement(116729..116833)
/locus_tag="ECBD_0112"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 35"
misc_feature complement(<116180..116407)
/locus_tag="ECBD_0112"
/note="putative uroporphyrinogen III C-methyltransferase;
Provisional; Region: PRK10920"
/db_xref="CDD:236795"
misc_feature complement(115595..115876)
/locus_tag="ECBD_0112"
/note="Peptidase family M23; Region: Peptidase_M23;
pfam01551"
/db_xref="CDD:216566"
gene complement(116867..118411)
/locus_tag="ECBD_0113"
/db_xref="GeneID:8156363"
CDS complement(116867..118411)
/locus_tag="ECBD_0113"
/EC_number="5.4.2.1"
/inference="protein motif:TFAM:TIGR01307"
/note="catalyzes the interconversion of 2-phosphoglycerate
and 3-phosphoglycerate"
/codon_start=1
/transl_table=11
/product="phosphoglyceromutase"
/protein_id="YP_003034376.1"
/db_xref="GI:253771545"
/db_xref="InterPro:IPR005995"
/db_xref="InterPro:IPR006124"
/db_xref="InterPro:IPR011258"
/db_xref="GeneID:8156363"
/translation="MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPH
TLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGA
VDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR
SAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADT
AVAGLQAAYARDENDEFVKATVIRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVN
ADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWMAKNDKTQLRISET
EKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKY
DTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQ
MRDPATGQAHTAHTNLPVPLIYVGDKNVKAVAGGKLSDIAPTMLSLMGMEIPQEMTGK
PLFIVE"
misc_feature complement(116876..118408)
/locus_tag="ECBD_0113"
/note="phosphoglyceromutase; Provisional; Region:
PRK05434"
/db_xref="CDD:235463"
misc_feature complement(116879..118396)
/locus_tag="ECBD_0113"
/note="2,3-bisphosphoglycerate-independent
phosphoglycerate mutase; Region: pgm_bpd_ind; TIGR01307"
/db_xref="CDD:130374"
gene 118656..119087
/locus_tag="ECBD_0114"
/db_xref="GeneID:8156364"
CDS 118656..119087
/locus_tag="ECBD_0114"
/inference="protein motif:PFAM:PF00581"
/note="PFAM: rhodanese;
SMART: Rhodanese domain protein;
KEGG: sbc:SbBS512_E4039 rhodanese domain protein"
/codon_start=1
/transl_table=11
/product="rhodanese"
/protein_id="YP_003034377.1"
/db_xref="GI:253771546"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:8156364"
/translation="MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGE
ATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDG
SGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK"
misc_feature 118785..119054
/locus_tag="ECBD_0114"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cd00158"
/db_xref="CDD:238089"
misc_feature 118956..118958
/locus_tag="ECBD_0114"
/note="active site residue [active]"
/db_xref="CDD:238089"
gene 119229..119480
/locus_tag="ECBD_0115"
/db_xref="GeneID:8156365"
CDS 119229..119480
/locus_tag="ECBD_0115"
/inference="protein motif:TFAM:TIGR02181"
/note="TIGRFAM: glutaredoxin;
PFAM: glutaredoxin;
KEGG: sfv:SFV_3921 glutaredoxin"
/codon_start=1
/transl_table=11
/product="glutaredoxin"
/protein_id="YP_003034378.1"
/db_xref="GI:253771547"
/db_xref="InterPro:IPR002109"
/db_xref="InterPro:IPR011767"
/db_xref="InterPro:IPR011900"
/db_xref="InterPro:IPR014025"
/db_xref="GeneID:8156365"
/translation="MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEM
IKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK"
misc_feature 119235..119456
/locus_tag="ECBD_0115"
/note="Glutaredoxin (GRX) family, GRX bacterial class 1
and 3 (b_1_3)-like subfamily; composed of bacterial GRXs,
approximately 10 kDa in size, and proteins containing a
GRX or GRX-like domain. GRX is a glutathione (GSH)
dependent reductase, catalyzing the...; Region:
GRX_GRXb_1_3_like; cd03418"
/db_xref="CDD:239510"
misc_feature order(119253..119255,119262..119270,119382..119387)
/locus_tag="ECBD_0115"
/note="GSH binding site [chemical binding]; other site"
/db_xref="CDD:239510"
misc_feature order(119262..119264,119271..119273)
/locus_tag="ECBD_0115"
/note="catalytic residues [active]"
/db_xref="CDD:239510"
gene 119543..120010
/locus_tag="ECBD_0116"
/db_xref="GeneID:8156366"
CDS 119543..120010
/locus_tag="ECBD_0116"
/inference="protein motif:TFAM:TIGR00809"
/note="molecular chaperone that is required for the normal
export of envelope proteins out of the cell cytoplasm; in
Escherichia coli this proteins forms a homotetramer in the
cytoplasm and delivers proteins to be exported to SecA"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecB"
/protein_id="YP_003034379.1"
/db_xref="GI:253771548"
/db_xref="InterPro:IPR003708"
/db_xref="GeneID:8156366"
/translation="MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDL
DTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYC
PNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA"
misc_feature 119573..119959
/locus_tag="ECBD_0116"
/note="Preprotein translocase subunit SecB. SecB is a
cytoplasmic component of the multisubunit membrane-bound
enzyme termed Sec protein translocase, which is the main
constituent of the General Secretory (type II) Pathway
involved in translocation of nascent...; Region:
Translocase_SecB; cd00557"
/db_xref="CDD:238312"
misc_feature order(119600..119602,119612..119614,119765..119767,
119771..119773)
/locus_tag="ECBD_0116"
/note="SecA binding site; other site"
/db_xref="CDD:238312"
misc_feature order(119762..119764,119768..119770,119774..119776,
119780..119782)
/locus_tag="ECBD_0116"
/note="Preprotein binding site; other site"
/db_xref="CDD:238312"
gene 120010..121029
/gene="gpsA"
/locus_tag="ECBD_0117"
/db_xref="GeneID:8156367"
CDS 120010..121029
/gene="gpsA"
/locus_tag="ECBD_0117"
/EC_number="1.1.1.94"
/inference="protein motif:PRIAM:1.1.1.94"
/note="catalyzes the NAD(P)H-dependent reduction of
glycerol 3-phosphate to glycerone phosphate"
/codon_start=1
/transl_table=11
/product="NAD(P)H-dependent glycerol-3-phosphate
dehydrogenase"
/protein_id="YP_003034380.1"
/db_xref="GI:253771549"
/db_xref="InterPro:IPR006109"
/db_xref="InterPro:IPR006168"
/db_xref="InterPro:IPR011128"
/db_xref="InterPro:IPR013332"
/db_xref="GeneID:8156367"
/translation="MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATL
ERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPD
ARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTD
QTFADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTAL
ITRGLAEMSRLGAALGADPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSA
QEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKD
ERSSH"
sig_peptide 120010..120075
/gene="gpsA"
/locus_tag="ECBD_0117"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.868) with cleavage site probability 0.764 at
residue 22"
misc_feature 120025..120999
/gene="gpsA"
/locus_tag="ECBD_0117"
/note="NAD(P)H-dependent glycerol-3-phosphate
dehydrogenase; Validated; Region: gpsA; PRK00094"
/db_xref="CDD:234629"
misc_feature 120028..120501
/gene="gpsA"
/locus_tag="ECBD_0117"
/note="NAD-dependent glycerol-3-phosphate dehydrogenase
N-terminus; Region: NAD_Gly3P_dh_N; pfam01210"
/db_xref="CDD:201664"
misc_feature 120556..120990
/gene="gpsA"
/locus_tag="ECBD_0117"
/note="NAD-dependent glycerol-3-phosphate dehydrogenase
C-terminus; Region: NAD_Gly3P_dh_C; pfam07479"
/db_xref="CDD:116100"
gene 121109..121930
/gene="cysE"
/locus_tag="ECBD_0118"
/db_xref="GeneID:8156368"
CDS 121109..121930
/gene="cysE"
/locus_tag="ECBD_0118"
/EC_number="2.3.1.30"
/inference="protein motif:TFAM:TIGR01172"
/note="catalyzes the O-acetylation of serine"
/codon_start=1
/transl_table=11
/product="serine acetyltransferase"
/protein_id="YP_003034381.1"
/db_xref="GI:253771550"
/db_xref="InterPro:IPR001451"
/db_xref="InterPro:IPR005881"
/db_xref="InterPro:IPR010493"
/db_xref="GeneID:8156368"
/translation="MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSA
LSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPL
LYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHAT
GIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGA
KIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI"
misc_feature 121109..121927
/gene="cysE"
/locus_tag="ECBD_0118"
/note="serine acetyltransferase; Provisional; Region:
cysE; PRK11132"
/db_xref="CDD:182987"
misc_feature 121133..121447
/gene="cysE"
/locus_tag="ECBD_0118"
/note="Serine acetyltransferase, N-terminal; Region:
SATase_N; pfam06426"
/db_xref="CDD:219022"
misc_feature 121526..121828
/gene="cysE"
/locus_tag="ECBD_0118"
/note="Serine acetyltransferase (SAT): SAT catalyzes the
CoA-dependent acetylation of the side chain hydroxyl group
of L-serine to form O-acetylserine, as the first step of a
two-step biosynthetic pathway in bacteria and plants
leading to the formation of...; Region: LbH_SAT; cd03354"
/db_xref="CDD:100045"
misc_feature order(121529..121531,121535..121537,121580..121582,
121682..121684,121772..121774,121781..121783,
121787..121789)
/gene="cysE"
/locus_tag="ECBD_0118"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:100045"
misc_feature order(121577..121582,121637..121642,121658..121663,
121682..121687,121718..121720,121763..121765,
121769..121774,121781..121783,121787..121789,
121811..121813,121826..121828)
/gene="cysE"
/locus_tag="ECBD_0118"
/note="active site"
/db_xref="CDD:100045"
misc_feature order(121577..121582,121658..121660,121682..121687)
/gene="cysE"
/locus_tag="ECBD_0118"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100045"
misc_feature order(121637..121642,121658..121663,121718..121720,
121763..121765,121769..121774,121781..121783,
121787..121789,121811..121813,121826..121828)
/gene="cysE"
/locus_tag="ECBD_0118"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:100045"
gene complement(121983..122456)
/locus_tag="ECBD_0119"
/db_xref="GeneID:8156369"
CDS complement(121983..122456)
/locus_tag="ECBD_0119"
/inference="protein motif:TFAM:TIGR00185"
/note="member of the SPOUT superfamily of RNA
methyltransferases; no methyltransferase activity observed
with certain tRNA substrates"
/codon_start=1
/transl_table=11
/product="tRNA/rRNA methyltransferase YibK"
/protein_id="YP_003034382.1"
/db_xref="GI:253771551"
/db_xref="InterPro:IPR001537"
/db_xref="InterPro:IPR004440"
/db_xref="GeneID:8156369"
/translation="MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRL
RRAGLDYHEFTAVTRHHDFRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPE
TRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGALLRD"
misc_feature complement(121986..122456)
/locus_tag="ECBD_0119"
/note="putative rRNA methylase; Provisional; Region:
PRK10358"
/db_xref="CDD:182406"
gene complement(122610..123800)
/gene="lldD"
/locus_tag="ECBD_0120"
/db_xref="GeneID:8156370"
CDS complement(122610..123800)
/gene="lldD"
/locus_tag="ECBD_0120"
/inference="protein motif:PFAM:PF01070"
/note="flavin mononucleotide-dependent dehydrogenase;
functions in aerobic respiration and also has a role in
anaerobic nitrate respiration"
/codon_start=1
/transl_table=11
/product="L-lactate dehydrogenase"
/protein_id="YP_003034383.1"
/db_xref="GI:253771552"
/db_xref="InterPro:IPR000262"
/db_xref="InterPro:IPR008259"
/db_xref="GeneID:8156370"
/translation="MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSE
VALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIP
FTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLE
DYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHG
GRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLY
ALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAK
GNAA"
misc_feature complement(122661..123800)
/gene="lldD"
/locus_tag="ECBD_0120"
/note="L-lactate dehydrogenase; Provisional; Region: lldD;
PRK11197"
/db_xref="CDD:183033"
misc_feature complement(122676..123782)
/gene="lldD"
/locus_tag="ECBD_0120"
/note="TIM barrel proteins share a structurally conserved
phosphate binding motif and in general share an eight
beta/alpha closed barrel structure. Specific for this
family is the conserved phosphate binding site at the
edges of strands 7 and 8. The phosphate...; Region:
TIM_phosphate_binding; cl17186"
/db_xref="CDD:247740"
misc_feature complement(order(122811..122816,122877..122882))
/gene="lldD"
/locus_tag="ECBD_0120"
/note="phosphate binding site [ion binding]; other site"
/db_xref="CDD:240073"
gene complement(123797..124573)
/locus_tag="ECBD_0121"
/db_xref="GeneID:8156371"
CDS complement(123797..124573)
/locus_tag="ECBD_0121"
/inference="protein motif:PFAM:PF07729"
/note="represses the lctPRD operon"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor LldR"
/protein_id="YP_003034384.1"
/db_xref="GI:253771553"
/db_xref="InterPro:IPR000524"
/db_xref="InterPro:IPR011711"
/db_xref="GeneID:8156371"
/translation="MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVS
RNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDIL
EARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHN
IVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAM
MAHLSFVHTTMKRFDEDQARHARITRLPGEHNEHSREKNA"
misc_feature complement(123800..124558)
/locus_tag="ECBD_0121"
/note="DNA-binding transcriptional repressor LldR;
Provisional; Region: PRK10421"
/db_xref="CDD:236690"
misc_feature complement(124358..124552)
/locus_tag="ECBD_0121"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature complement(order(124367..124378,124382..124387,
124415..124417,124424..124429,124433..124447,
124469..124474,124478..124480,124547..124549))
/locus_tag="ECBD_0121"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(123908..124276)
/locus_tag="ECBD_0121"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:219539"
gene complement(124573..126228)
/locus_tag="ECBD_0122"
/db_xref="GeneID:8156372"
CDS complement(124573..126228)
/locus_tag="ECBD_0122"
/inference="protein motif:TFAM:TIGR00795"
/note="TIGRFAM: L-lactate transport;
PFAM: L-lactate permease;
KEGG: sbc:SbBS512_E4029 L-lactate permease"
/codon_start=1
/transl_table=11
/product="L-lactate permease"
/protein_id="YP_003034385.1"
/db_xref="GI:253771554"
/db_xref="InterPro:IPR003804"
/db_xref="GeneID:8156372"
/translation="MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAAS
WTVAIALAVALLFYKMPVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDI
IRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLC
LIVNTAPVAFGAMGIPILVAGQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWR
GIKETWPAVVVAGGSFAIAQYLSSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFR
FGDLGASQVDMTLAHTGYTAGQVLRAWTPFLFLTATVTLWSIPPFKALFASGGALYEW
VINIPVPYLDKLVARMPPVVSEATAYAAVFKFDWFSATGTAILFAALLSIVWLKMKPS
DAISTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGHAFTFFSPFLG
WLGVFLTGSDTSSNALFAALQATAAQQIGVSDLLLVAANTTGGVTGKMISPQSIAIAC
AAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP"
misc_feature complement(124576..126228)
/locus_tag="ECBD_0122"
/note="L-lactate permease; Provisional; Region: PRK10420"
/db_xref="CDD:182445"
misc_feature complement(124579..126228)
/locus_tag="ECBD_0122"
/note="glycolate transporter; Provisional; Region:
PRK09695"
/db_xref="CDD:182032"
gene complement(126596..131446)
/locus_tag="ECBD_0123"
/db_xref="GeneID:8156373"
CDS complement(126596..131446)
/locus_tag="ECBD_0123"
/inference="protein motif:PFAM:PF03895"
/note="PFAM: YadA domain protein; Hep_Hag
repeat-containing protein; Haemagluttinin domain protein;
KEGG: ssn:SSON_3803 adhesin"
/codon_start=1
/transl_table=11
/product="YadA domain protein"
/protein_id="YP_003034386.1"
/db_xref="GI:253771555"
/db_xref="InterPro:IPR005594"
/db_xref="InterPro:IPR008635"
/db_xref="InterPro:IPR008640"
/db_xref="GeneID:8156373"
/translation="MNKIFKVIWNPATGNYTVTSETAKSRGKKSGRSKLLISALVAGG
LLSSFGALANAGNDNGQGVDYGSGSAGDGWVAIGKGAKANTFMNTSGSSTAVGYDAIA
EGQYSSAIGSKPHAIGGASMAFGVSAISEGDRSIALGASSYSLGQYSMALGRYSKALG
KLSIAMGDSSKAEGANAIALGNATKATEIMSIALGDTANASKAYSMALGASSVASEEN
AIALGRSSVASGTDSLAFGRQSLASAANAIAIGAETEAAENATAIGNNAKAKGTNSMA
MGFGSLADKVNTIALGNGSQALADNAIAIGQGNKADGVDAIALGNGSQSRGLNTIALG
TASNATGDKSLALGSNSSANGINSVALGADSIADLDNTVSVGNSSLKRKIVNVKNGAI
KSDSYDAINGSQLYAISDSVAKRLGGGAAVDVDDGTVTAPTYNLKNGSKNNVGAALAV
LDENTLQWDQTKGKYSAAHGTSSPTASVITDVADGTISASSKDAVNGSQLKATNDDVE
ANTANIATNTSNIATNTASIATNTTNITNLTDSVGDLQADALLWNETKKAFSAAHGQD
TTSKITNVKDADLTADSTDAVNGSQLKTTNDAVATNTTNIANNTSNIATNTTNISNLT
ETVTNLGEDALKWDKDNGVFTAAHGTETTSKITNVKDGDLTTGSTDAVNGSQLKTTND
AVATNTTNIATNTTNISNLTETVTNLGEDALKWDKDNGVFTAAHGNNTASKITNILDG
TVTATSSDAINGSQLYDLSSNIATYFGGNASVNTDGVFTGPTYKIGETNYYNVGDALA
AINSSFSTSLGDALLWDATAGKFSAKHGTNGDASVITDVADGEISDSSSDAVNGSQLH
GVSSYVVDALGGGAEVNADGTITAPTYTIANADYDNVGDALNAIDTTLDDALLWDADA
GENGAFSAAHGKDKTASVITNVANGAISAASSDAINGSQLYTTNKYIADALGGDAEVN
ADGTITAPTYTIANTEYNNVGDALDALDDNALLWDETANGGAGAYNASHDGKASIITN
VANGSISEDSTDAVNGSQLNATNMMIEQNTQIINQLAGNTDATYIQENGAGINYVRTN
DDGLAFNDASAQGVGATAIGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVSSRVIA
KGSRDTSITENGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTVRQLQ
NAIGAVATTPSKYFHANSTEEDSLAVGEDSLAMGAKTIVNGDAGIGIGLNTLVLTDAI
NGIAIGSNASANHANSIAMGSGSQTTRGAQTDYTAYNMDAPQNSVGEFSVGSEDGQRQ
ITNVAAGSADTDAVNVGQLKVTDERVAQNTQSITNLNNQVTNLDTRVTNIENGIGDIV
TTGSTKYFKTNTDGVDANAQGKDSVAIGSGSIAAADNSVALGTGSVADEENTISVGSS
TNQRRITNVAAGKNATDAVNVAQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGGTTR
ISNVSAGVNNNDAVNYAQLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMAM
TGLPQAYTPGASMASIGGGTYNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAAL
GAGIQW"
sig_peptide complement(131285..131446)
/locus_tag="ECBD_0123"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.904 at
residue 54"
misc_feature complement(131378..131446)
/locus_tag="ECBD_0123"
/note="Extended Signal Peptide of Type V secretion system;
Region: ESPR; pfam13018"
/db_xref="CDD:205199"
misc_feature complement(130718..131089)
/locus_tag="ECBD_0123"
/note="YadA-like, left-handed beta-roll; Region:
LbR_YadA-like; cd12820"
/db_xref="CDD:240612"
misc_feature complement(order(130721..130723,130733..130750,
130757..130762,130766..130768,130778..130783,
130787..130789,130793..130795,130817..130825,
130829..130831,130835..130837,130859..130867,
130871..130873,130877..130879,130901..130909,
130913..130915,130919..130921,130943..130951,
130955..130957,130961..130963,130985..130993,
130997..130999,131003..131005,131027..131032,
131045..131047,131069..131074,131081..131083,
131087..131089))
/locus_tag="ECBD_0123"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:240612"
misc_feature complement(130343..130795)
/locus_tag="ECBD_0123"
/note="YadA-like, left-handed beta-roll; Region:
LbR_YadA-like; cd12820"
/db_xref="CDD:240612"
misc_feature complement(order(130346..130348,130358..130375,
130382..130387,130391..130393,130403..130408,
130412..130414,130418..130420,130442..130450,
130454..130456,130460..130462,130484..130492,
130496..130498,130502..130504,130526..130534,
130538..130540,130544..130546,130568..130576,
130580..130582,130586..130588,130610..130618,
130622..130624,130628..130630,130733..130738,
130751..130753,130775..130780,130787..130789,
130793..130795))
/locus_tag="ECBD_0123"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:240612"
misc_feature complement(126599..128431)
/locus_tag="ECBD_0123"
/note="Autotransporter adhesin [Intracellular trafficking
and secretion / Extracellular structures]; Region: Hia;
COG5295"
/db_xref="CDD:227614"
misc_feature complement(<127949..128164)
/locus_tag="ECBD_0123"
/note="Left-handed beta-roll, including virulence factors
and various other proteins; Region: LbR-like; cl17507"
/db_xref="CDD:248061"
misc_feature complement(order(127958..127960,127964..127966,
127970..127972,127976..127978,128000..128002,
128006..128008,128012..128014,128036..128044,
128048..128050,128054..128056,128078..128086,
128090..128092,128096..128098,128120..128128,
128132..128134,128138..128140))
/locus_tag="ECBD_0123"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:240610"
misc_feature complement(127430..127492)
/locus_tag="ECBD_0123"
/note="Haemagglutinin; Region: HIM; pfam05662"
/db_xref="CDD:114389"
misc_feature complement(127067..127129)
/locus_tag="ECBD_0123"
/note="Haemagglutinin; Region: HIM; pfam05662"
/db_xref="CDD:114389"
misc_feature complement(126599..126835)
/locus_tag="ECBD_0123"
/note="YadA-like C-terminal region; Region: YadA;
pfam03895"
/db_xref="CDD:217782"
gene complement(131490..132173)
/locus_tag="ECBD_0124"
/db_xref="GeneID:8156374"
CDS complement(131490..132173)
/locus_tag="ECBD_0124"
/inference="similar to AA sequence:KEGG:SFV_3931"
/note="KEGG: sfv:SFV_3931 inner membrane lipoprotein"
/codon_start=1
/transl_table=11
/product="inner membrane lipoprotein"
/protein_id="YP_003034387.1"
/db_xref="GI:253771556"
/db_xref="GeneID:8156374"
/translation="MNLKKIFFSAVTVSVLCALTGCDYIQEGKPESSLLKQEEEHNNK
IVLLEKQQAQLKSQLETIQKQQTGIINSTKTLTHVIKSVKDQQNTFIFTEFNPAKTKY
FILNNGSVALAGRVLSIDATENGSVIHISLVNLLSIPISNIGFNATWGGEKPVDAKEF
ARWQQLLFNTSMTSTLKLLPGQWQDINLTLKGVSPNNLGYLKLAINMENIQFDNLPAA
DNRQKRSKK"
sig_peptide complement(132108..132173)
/locus_tag="ECBD_0124"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.666) with cleavage site probability 0.552 at
residue 22"
misc_feature complement(131565..132047)
/locus_tag="ECBD_0124"
/note="Protein of unknown function (DUF3251); Region:
DUF3251; cl08186"
/db_xref="CDD:244863"
gene complement(132717..133079)
/locus_tag="ECBD_0125"
/db_xref="GeneID:8156375"
CDS complement(132717..133079)
/locus_tag="ECBD_0125"
/inference="similar to AA sequence:KEGG:SbBS512_E4020"
/note="KEGG: sbc:SbBS512_E4020 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034388.1"
/db_xref="GI:253771557"
/db_xref="GeneID:8156375"
/translation="MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKAT
LEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTA
LGREMGLEEMTGFSKTAF"
misc_feature complement(132720..133073)
/locus_tag="ECBD_0125"
/note="hypothetical protein; Provisional; Region:
PRK11020"
/db_xref="CDD:182904"
gene 133364..133573
/locus_tag="ECBD_0126"
/db_xref="GeneID:8156376"
CDS 133364..133573
/locus_tag="ECBD_0126"
/inference="similar to AA sequence:KEGG:SFV_3935"
/note="KEGG: sfv:SFV_3935 cytoplasmic protein"
/codon_start=1
/transl_table=11
/product="cytoplasmic protein"
/protein_id="YP_003034389.1"
/db_xref="GI:253771558"
/db_xref="GeneID:8156376"
/translation="MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPD
ESVPLYLQRLEYYRRLYRPKQVEGQ"
gene complement(133585..134172)
/gene="mtlR"
/locus_tag="ECBD_0127"
/db_xref="GeneID:8156377"
CDS complement(133585..134172)
/gene="mtlR"
/locus_tag="ECBD_0127"
/inference="protein motif:PFAM:PF05068"
/note="Acts as a repressor of the mtlAD operon"
/codon_start=1
/transl_table=11
/product="mannitol repressor protein"
/protein_id="YP_003034390.1"
/db_xref="GI:253771559"
/db_xref="InterPro:IPR007761"
/db_xref="GeneID:8156377"
/translation="MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRS
FLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVI
NRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSL
YAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK"
misc_feature complement(133591..134112)
/gene="mtlR"
/locus_tag="ECBD_0127"
/note="Transcriptional regulator [Transcription]; Region:
MtlR; COG3722"
/db_xref="CDD:226245"
misc_feature complement(133594..134097)
/gene="mtlR"
/locus_tag="ECBD_0127"
/note="mannitol repressor protein; Provisional; Region:
mtlR; PRK11001"
/db_xref="CDD:236817"
gene complement(134172..135320)
/locus_tag="ECBD_0128"
/db_xref="GeneID:8156378"
CDS complement(134172..135320)
/locus_tag="ECBD_0128"
/inference="protein motif:PFAM:PF08125"
/note="PFAM: Mannitol dehydrogenase domain; Mannitol
dehydrogenase rossman domain;
KEGG: elf:LF82_1407 mannitol-1-phosphate 5-dehydrogenase"
/codon_start=1
/transl_table=11
/product="mannitol-1-phosphate 5-dehydrogenase"
/protein_id="YP_003034391.1"
/db_xref="GI:253771560"
/db_xref="InterPro:IPR000669"
/db_xref="InterPro:IPR013118"
/db_xref="InterPro:IPR013131"
/db_xref="GeneID:8156378"
/translation="MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARH
SYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKG
LVKRKEQGNESPLNIIACENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRI
VPPSASATNDPLEVTVETFSEWIVDKTQFKGALPNIPGMELTDNLMAFVERKLFTLNT
GHAITAYLGKLAGHQTIRDAILDEKIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQK
ILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYGLPHKNLIEGIAAAMHF
RSEDDPQAQELAALIADKGPQAALAQISGLDANSEVVSEAVTAYKAMQ"
misc_feature complement(134175..135320)
/locus_tag="ECBD_0128"
/note="mannitol-1-phosphate 5-dehydrogenase; Provisional;
Region: PRK02318"
/db_xref="CDD:235031"
misc_feature complement(134952..135320)
/locus_tag="ECBD_0128"
/note="Mannitol dehydrogenase Rossmann domain; Region:
Mannitol_dh; pfam01232"
/db_xref="CDD:144722"
misc_feature complement(134202..134879)
/locus_tag="ECBD_0128"
/note="Mannitol dehydrogenase C-terminal domain; Region:
Mannitol_dh_C; pfam08125"
/db_xref="CDD:149275"
gene complement(135550..137463)
/locus_tag="ECBD_0129"
/db_xref="GeneID:8156379"
CDS complement(135550..137463)
/locus_tag="ECBD_0129"
/inference="protein motif:TFAM:TIGR00851"
/note="TIGRFAM: PTS system, mannitol-specific IIC subunit;
PFAM: phosphoenolpyruvate-dependent sugar
phosphotransferase system EIIA 2; phosphotransferase
system EIIC; phosphotransferase system
lactose/cellobiose-specific IIB subunit"
/codon_start=1
/transl_table=11
/product="PTS system, mannitol-specific IIC subunit"
/protein_id="YP_003034392.1"
/db_xref="GI:253771561"
/db_xref="InterPro:IPR002178"
/db_xref="InterPro:IPR003352"
/db_xref="InterPro:IPR003501"
/db_xref="InterPro:IPR004718"
/db_xref="InterPro:IPR013011"
/db_xref="InterPro:IPR013014"
/db_xref="GeneID:8156379"
/translation="MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLP
NETLAKLVGPMITYLLPLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMI
AGPLGGWCIKHFDRWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPIVEALSKM
LAAGVNFMVVHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIE
ANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILG
GMTGVFTLTILGGGLVSPASPGSILAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILL
KTSKVKEEDDIEAATRRMQDMKAESKGASPLSAGDVTNDLSHVRKIIVACDAGMGSSA
MGAGVLRKKIQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLT
NFLDSGLYTSLTERLVAAQRHTANEEKVKDSLKDSFDDSSANLFKLGAENIFLGRKAA
TKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKT
GVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTT
SVDEVLELLAGRK"
misc_feature complement(135553..137463)
/locus_tag="ECBD_0129"
/note="PTS system mannitol-specific transporter subunit
IICBA; Provisional; Region: PRK15083"
/db_xref="CDD:237905"
misc_feature complement(136429..137442)
/locus_tag="ECBD_0129"
/note="PTS system, mannitol-specific IIC component;
Region: mtlA; TIGR00851"
/db_xref="CDD:129930"
misc_feature complement(136069..136332)
/locus_tag="ECBD_0129"
/note="PTS_IIB_mannitol: subunit IIB of enzyme II (EII) of
the mannitol-specific phosphoenolpyruvate:carbohydrate
phosphotransferase system (PTS). In this system, EII is a
mannitol-specific permease with two cytoplasmic domains
(IIA and IIB) and a transmembrane...; Region:
PTS_IIB_mannitol; cd05567"
/db_xref="CDD:99909"
misc_feature complement(136291..136317)
/locus_tag="ECBD_0129"
/note="active site"
/db_xref="CDD:99909"
misc_feature complement(order(136291..136299,136303..136314))
/locus_tag="ECBD_0129"
/note="P-loop; other site"
/db_xref="CDD:99909"
misc_feature complement(136312..136314)
/locus_tag="ECBD_0129"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99909"
misc_feature complement(135565..135972)
/locus_tag="ECBD_0129"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cd00211"
/db_xref="CDD:238129"
misc_feature complement(order(135802..135804,135850..135852))
/locus_tag="ECBD_0129"
/note="active site"
/db_xref="CDD:238129"
misc_feature complement(135802..135804)
/locus_tag="ECBD_0129"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238129"
gene 138000..138362
/locus_tag="ECBD_0130"
/db_xref="GeneID:8156380"
CDS 138000..138362
/locus_tag="ECBD_0130"
/inference="similar to AA sequence:KEGG:SSON_3810"
/note="KEGG: ssn:SSON_3810 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034393.1"
/db_xref="GI:253771562"
/db_xref="GeneID:8156380"
/translation="MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAI
HTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSHVASQEKATDPEIAALSDRISRL
EHQLAAEKKTDYSTFPEI"
misc_feature 138006..138239
/locus_tag="ECBD_0130"
/note="Protein of unknown function (DUF3302); Region:
DUF3302; pfam11742"
/db_xref="CDD:152178"
gene 138365..139501
/locus_tag="ECBD_0131"
/db_xref="GeneID:8156381"
CDS 138365..139501
/locus_tag="ECBD_0131"
/inference="protein motif:PFAM:PF00529"
/note="PFAM: secretion protein HlyD"
/codon_start=1
/transl_table=11
/product="secretion protein HlyD"
/protein_id="YP_003034394.1"
/db_xref="GI:253771563"
/db_xref="InterPro:IPR006143"
/db_xref="GeneID:8156381"
/translation="MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLI
LLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQAR
VDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFS
ERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLE
QTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGD
DAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPND
DIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH"
misc_feature 138377..139432
/locus_tag="ECBD_0131"
/note="Multidrug resistance efflux pump [Defense
mechanisms]; Region: EmrA; COG1566"
/db_xref="CDD:224482"
misc_feature 138554..138697
/locus_tag="ECBD_0131"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature 139025..>139267
/locus_tag="ECBD_0131"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:222128"
gene complement(139961..140398)
/locus_tag="ECBD_0132"
/db_xref="GeneID:8156382"
CDS complement(139961..140398)
/locus_tag="ECBD_0132"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034395.1"
/db_xref="GI:253771564"
/db_xref="GeneID:8156382"
/translation="MADKAILWALISASTKEGRKACSLSYFACKAAETELGLAYMAAN
DNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNK
IKDKNKKIIDINSVNICSDDKNIKLRVNSTIMAIDDSIKCIDE"
gene complement(140487..141101)
/locus_tag="ECBD_0133"
/pseudo
/db_xref="GeneID:8156383"
gene complement(141105..141566)
/locus_tag="ECBD_0134"
/db_xref="GeneID:8156384"
CDS complement(141105..141566)
/locus_tag="ECBD_0134"
/inference="similar to AA sequence:KEGG:SBO_3594"
/note="KEGG: sbo:SBO_3594 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034396.1"
/db_xref="GI:253771565"
/db_xref="GeneID:8156384"
/translation="MKACLLLFFYFSLIGQLHGADVKIKENESVMGSTAMTYDLSEEK
LMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSD
TNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP"
sig_peptide complement(141507..141566)
/locus_tag="ECBD_0134"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.957) with cleavage site probability 0.956 at
residue 20"
misc_feature complement(<141174..>141425)
/locus_tag="ECBD_0134"
/note="FOG: TPR repeat, SEL1 subfamily [General function
prediction only]; Region: COG0790"
/db_xref="CDD:223861"
gene complement(141578..142516)
/locus_tag="ECBD_0135"
/db_xref="GeneID:8156385"
CDS complement(141578..142516)
/locus_tag="ECBD_0135"
/inference="protein motif:PFAM:PF03527"
/note="PFAM: RHS protein;
KEGG: sbo:SBO_3593 RhsA"
/codon_start=1
/transl_table=11
/product="RHS protein"
/protein_id="YP_003034397.1"
/db_xref="GI:253771566"
/db_xref="InterPro:IPR001826"
/db_xref="GeneID:8156385"
/translation="MLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPAR
KIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEE
SGLYYNRHRYYDPLQGRYISQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESD
LIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLF
SCNTGKGQNSFASQLAKELHTNVIGPDTLWTWWGRGTNGKLKMDTVLTAPTNLNSNKD
LMAITTKDLGNWITYGPSGHPISNMQGTPEKPSDIR"
misc_feature complement(141656..>142486)
/locus_tag="ECBD_0135"
/note="Rhs family protein [Cell envelope biogenesis, outer
membrane]; Region: RhsA; COG3209"
/db_xref="CDD:225750"
misc_feature complement(142259..142381)
/locus_tag="ECBD_0135"
/note="RHS protein; Region: RHS; pfam03527"
/db_xref="CDD:112350"
misc_feature complement(142067..142300)
/locus_tag="ECBD_0135"
/note="RHS repeat-associated core domain; Region:
Rhs_assc_core; TIGR03696"
/db_xref="CDD:234316"
gene complement(142564..143406)
/locus_tag="ECBD_0136"
/db_xref="GeneID:8156386"
CDS complement(142564..143406)
/locus_tag="ECBD_0136"
/inference="protein motif:PFAM:PF03130"
/note="PFAM: PBS lyase HEAT domain protein
repeat-containing protein;
KEGG: sei:SPC_1578 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034398.1"
/db_xref="GI:253771567"
/db_xref="InterPro:IPR004155"
/db_xref="GeneID:8156386"
/translation="MSNTYQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSA
RVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALND
KSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKAT
IPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSY
RKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDK
LKRS"
misc_feature complement(142567..143406)
/locus_tag="ECBD_0136"
/note="putative lyase; Provisional; Region: PRK09687"
/db_xref="CDD:170047"
gene complement(143427..144299)
/locus_tag="ECBD_0137"
/db_xref="GeneID:8156387"
CDS complement(143427..144299)
/locus_tag="ECBD_0137"
/inference="protein motif:COG:COG3209"
/note="KEGG: sbo:SBO_0563 RhsC protein in rhs element"
/codon_start=1
/transl_table=11
/product="Rhs family protein-like protein"
/protein_id="YP_003034399.1"
/db_xref="GI:253771568"
/db_xref="InterPro:IPR001826"
/db_xref="GeneID:8156387"
/translation="MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVT
SGHPVNPLLGAKVLPGETDLALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADI
RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVTNTDPLGL
EVFPRPFPLPIPWPKSPAQQQADDNAAKALTKWWNDTASQRIFDSLILNNPGLALDIT
MIASRGNVADTGITDRVNDIINDRFWSDGKKPDRCDVLQELIDCGDISAKDAKSTQKA
WNCRHSRQSNDKKR"
misc_feature complement(144213..>144293)
/locus_tag="ECBD_0137"
/note="PAAR motif; Region: PAAR_motif; cl15808"
/db_xref="CDD:247079"
misc_feature complement(143820..144038)
/locus_tag="ECBD_0137"
/note="RHS repeat-associated core domain; Region:
Rhs_assc_core; TIGR03696"
/db_xref="CDD:234316"
misc_feature complement(143817..>143996)
/locus_tag="ECBD_0137"
/note="Rhs family protein [Cell envelope biogenesis, outer
membrane]; Region: RhsA; COG3209"
/db_xref="CDD:225750"
gene 144528..145136
/locus_tag="ECBD_0138"
/db_xref="GeneID:8156388"
CDS 144528..145136
/locus_tag="ECBD_0138"
/inference="protein motif:PFAM:PF02798"
/note="PFAM: glutathione S-transferase domain;
KEGG: sbc:SbBS512_E4007 glutathione S-transferase"
/codon_start=1
/transl_table=11
/product="glutathione S-transferase"
/protein_id="YP_003034400.1"
/db_xref="GI:253771569"
/db_xref="InterPro:IPR004045"
/db_xref="InterPro:IPR004046"
/db_xref="GeneID:8156388"
/translation="MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFN
PLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMD
AGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC
AVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA"
misc_feature 144528..145133
/locus_tag="ECBD_0138"
/note="putative glutathione S-transferase; Provisional;
Region: PRK10357"
/db_xref="CDD:182405"
misc_feature 144528..144740
/locus_tag="ECBD_0138"
/note="GST_N family, unknown subfamily 3; composed of
uncharacterized bacterial proteins with similarity to
GSTs. GSTs are cytosolic dimeric proteins involved in
cellular detoxification by catalyzing the conjugation of
glutathione (GSH) with a wide range of...; Region:
GST_N_3; cd03049"
/db_xref="CDD:239347"
misc_feature order(144558..144560,144564..144569,144573..144578,
144585..144590,144717..144719,144726..144731)
/locus_tag="ECBD_0138"
/note="putative C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:239347"
misc_feature order(144558..144560,144669..144677,144711..144716)
/locus_tag="ECBD_0138"
/note="putative GSH binding site (G-site) [chemical
binding]; other site"
/db_xref="CDD:239347"
misc_feature order(144669..144671,144708..144713,144717..144722,
144729..144731)
/locus_tag="ECBD_0138"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:239347"
misc_feature 144795..145124
/locus_tag="ECBD_0138"
/note="C-terminal, alpha helical domain of an unknown
subfamily 6 of Glutathione S-transferases; Region:
GST_C_6; cd03205"
/db_xref="CDD:198314"
misc_feature order(144798..144803,144807..144815,144819..144824,
144831..144833,144852..144857,144867..144869,
144873..144884,144891..144893,144900..144902,
144912..144914,144921..144926,144933..144935)
/locus_tag="ECBD_0138"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:198314"
misc_feature order(144807..144809,144819..144821,144828..144833,
144852..144854,144984..144986,144993..144998,
145005..145007,145017..145019,145092..145094,
145104..145109,145113..145124)
/locus_tag="ECBD_0138"
/note="N-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:198314"
misc_feature order(144819..144821,144831..144836,144843..144848,
145008..145010,145017..145019)
/locus_tag="ECBD_0138"
/note="putative substrate binding pocket (H-site)
[chemical binding]; other site"
/db_xref="CDD:198314"
gene 145234..146625
/locus_tag="ECBD_0139"
/db_xref="GeneID:8156389"
CDS 145234..146625
/locus_tag="ECBD_0139"
/EC_number="2.9.1.1"
/inference="protein motif:TFAM:TIGR00474"
/note="catalyzes the formation of
selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and
L-selenophosphate in selenoprotein biosynthesis"
/codon_start=1
/transl_table=11
/product="selenocysteine synthase"
/protein_id="YP_003034401.1"
/db_xref="GI:253771570"
/db_xref="InterPro:IPR004534"
/db_xref="GeneID:8156389"
/translation="MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQML
DEAREVIRGSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAE
AAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLM
LAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNEN
TALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEP
MPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAAL
EATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLS
QIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRC
LEDEQRFLEMLLK"
misc_feature 145240..146622
/locus_tag="ECBD_0139"
/note="selenocysteine synthase; Provisional; Region:
PRK04311"
/db_xref="CDD:235278"
misc_feature 145258..145377
/locus_tag="ECBD_0139"
/note="Selenocysteine synthase N terminal; Region:
Se-cys_synth_N; pfam12390"
/db_xref="CDD:204898"
misc_feature 145399..146622
/locus_tag="ECBD_0139"
/note="Selenocysteine synthase [seryl-tRNASer selenium
transferase] [Amino acid transport and metabolism];
Region: SelA; COG1921"
/db_xref="CDD:224832"
misc_feature order(145909..145911,146029..146031,146038..146040,
146107..146109,146116..146118)
/locus_tag="ECBD_0139"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99742"
misc_feature 146116..146118
/locus_tag="ECBD_0139"
/note="catalytic residue [active]"
/db_xref="CDD:99742"
gene 146622..148466
/locus_tag="ECBD_0140"
/db_xref="GeneID:8156390"
CDS 146622..148466
/locus_tag="ECBD_0140"
/inference="protein motif:TFAM:TIGR00475"
/note="TIGRFAM: selenocysteine-specific translation
elongation factor;
PFAM: protein synthesis factor GTP-binding; Elongation
factor SelB winged helix 3; Elongation factor SelB winged
helix 2; elongation factor Tu domain 2 protein;
KEGG: elf:LF82_2111 selenocysteine-specific elongation
factor"
/codon_start=1
/transl_table=11
/product="selenocysteinyl-tRNA-specific translation
factor"
/protein_id="YP_003034402.1"
/db_xref="GI:253771571"
/db_xref="InterPro:IPR000795"
/db_xref="InterPro:IPR004161"
/db_xref="InterPro:IPR004535"
/db_xref="InterPro:IPR015190"
/db_xref="InterPro:IPR015191"
/db_xref="GeneID:8156390"
/translation="MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAY
WPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLT
GNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREH
LLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRV
RALHAQNQPTETAHAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHT
PLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLVDNDRLVLRDISARNTLAG
ARVVMLNPPRRGKRKPEYLQWLASLARAQSDADALSVHLERGAVNLADFAWARQLNGE
GMRELLQQPGYIQAGYSLLNASVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMAL
PMEDEALVLLLIEKMRESGDIHSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGDEPWW
VRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGS
TCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK"
misc_feature 146622..148463
/locus_tag="ECBD_0140"
/note="selenocysteinyl-tRNA-specific translation factor;
Provisional; Region: PRK10512"
/db_xref="CDD:182508"
misc_feature 146625..147134
/locus_tag="ECBD_0140"
/note="SelB, the dedicated elongation factor for delivery
of selenocysteinyl-tRNA to the ribosome; Region: SelB;
cd04171"
/db_xref="CDD:206734"
misc_feature 146628..146651
/locus_tag="ECBD_0140"
/note="G1 box; other site"
/db_xref="CDD:206734"
misc_feature order(146631..146633,146637..146639,146649..146654,
146661..146663,146670..146675,146742..146747,
146802..146807,146874..146879,146991..146993,
147003..147005)
/locus_tag="ECBD_0140"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206734"
misc_feature order(146637..146654,146955..146960,146964..146966,
147060..147068)
/locus_tag="ECBD_0140"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206734"
misc_feature 146697..146744
/locus_tag="ECBD_0140"
/note="Switch I region; other site"
/db_xref="CDD:206734"
misc_feature 146730..146732
/locus_tag="ECBD_0140"
/note="G2 box; other site"
/db_xref="CDD:206734"
misc_feature 146790..146801
/locus_tag="ECBD_0140"
/note="G3 box; other site"
/db_xref="CDD:206734"
misc_feature 146796..146852
/locus_tag="ECBD_0140"
/note="Switch II region; other site"
/db_xref="CDD:206734"
misc_feature 146955..146966
/locus_tag="ECBD_0140"
/note="G4 box; other site"
/db_xref="CDD:206734"
misc_feature 147060..147068
/locus_tag="ECBD_0140"
/note="G5 box; other site"
/db_xref="CDD:206734"
misc_feature 147144..147395
/locus_tag="ECBD_0140"
/note="selB_II: this subfamily represents the domain of
elongation factor SelB, homologous to domain II of EF-Tu.
SelB may function by replacing EF-Tu. In prokaryotes, the
incorporation of selenocysteine as the 21st amino acid,
encoded by TGA, requires several...; Region: selB_II;
cd03696"
/db_xref="CDD:239667"
misc_feature 147360..147632
/locus_tag="ECBD_0140"
/note="This family represents the domain of elongation
factor SelB, homologous to domain III of EF-Tu. SelB may
function by replacing EF-Tu. In prokaryotes, the
incorporation of selenocysteine as the 21st amino acid,
encoded by TGA, requires several elements:...; Region:
selB_III; cd04094"
/db_xref="CDD:239761"
misc_feature 147888..148061
/locus_tag="ECBD_0140"
/note="Elongation factor SelB, winged helix; Region:
SelB-wing_2; pfam09106"
/db_xref="CDD:220111"
misc_feature 148290..148436
/locus_tag="ECBD_0140"
/note="Elongation factor SelB, winged helix; Region:
SelB-wing_3; pfam09107"
/db_xref="CDD:204138"
gene 148656..149807
/locus_tag="ECBD_0141"
/db_xref="GeneID:8156391"
CDS 148656..149807
/locus_tag="ECBD_0141"
/inference="protein motif:PFAM:PF00465"
/note="PFAM: iron-containing alcohol dehydrogenase;
KEGG: elf:LF82_3344 alcohol dehydrogenase"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase"
/protein_id="YP_003034403.1"
/db_xref="GI:253771572"
/db_xref="InterPro:IPR001670"
/db_xref="GeneID:8156391"
/translation="MASSTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDNMLTK
LGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHD
CAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIK
MAIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALK
AVTMIAENLPLAVEDGSNAKAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYNLP
HGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAEACINAIRELAKKV
DIPAGLRDLNVKEEDFAVLATNALKDACGFTNPIQATHEEIVAIYRAAM"
misc_feature 148656..149804
/locus_tag="ECBD_0141"
/note="putative alcohol dehydrogenase; Provisional;
Region: PRK09860"
/db_xref="CDD:182118"
misc_feature 148665..149795
/locus_tag="ECBD_0141"
/note="Lactadehyde:propanediol oxidoreductase (LPO)
catalyzes the interconversion between L-lactaldehyde and
L-1,2-propanediol in Escherichia coli and other
enterobacteria; Region: LPO; cd08176"
/db_xref="CDD:173935"
misc_feature order(148683..148697,149166..149168,149295..149297,
149388..149390)
/locus_tag="ECBD_0141"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:173935"
misc_feature order(148770..148772,148944..148952,149067..149072,
149079..149081,149106..149108,149133..149135,
149190..149192,149214..149216,149235..149237,
149247..149249,149442..149444,149484..149486)
/locus_tag="ECBD_0141"
/note="active site"
/db_xref="CDD:173935"
misc_feature order(149235..149237,149247..149249,149442..149444,
149484..149486)
/locus_tag="ECBD_0141"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:173935"
gene 149972..151510
/locus_tag="ECBD_0142"
/db_xref="GeneID:8156392"
CDS 149972..151510
/locus_tag="ECBD_0142"
/EC_number="1.2.1.3"
/inference="protein motif:PRIAM:1.2.1.3"
/note="PFAM: aldehyde dehydrogenase;
KEGG: sbc:SbBS512_E4003 aldehyde dehydrogenase B"
/codon_start=1
/transl_table=11
/product="aldehyde dehydrogenase (NAD(+))"
/protein_id="YP_003034404.1"
/db_xref="GI:253771573"
/db_xref="InterPro:IPR015590"
/db_xref="InterPro:IPR016160"
/db_xref="GeneID:8156392"
/translation="MTNNPPSAQIKPGEYGFPLKLKTRYDNFIGGEWVAPADGEYYQN
LTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLE
LLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGV
VNVVNGAGGVIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNI
FFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESI
RSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLE
PTILFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYK
MGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKP
LGLF"
misc_feature 150044..151483
/locus_tag="ECBD_0142"
/note="Ralstonia eutrophus NAD+-dependent acetaldehyde
dehydrogenase II-like; Region: ALDH_ACDHII-AcoD; cd07116"
/db_xref="CDD:143434"
misc_feature 150068..151465
/locus_tag="ECBD_0142"
/note="Aldehyde dehydrogenase family; Region: Aldedh;
pfam00171"
/db_xref="CDD:215767"
misc_feature order(150470..150484,150506..150508,150551..150553,
150557..150562,150701..150712,150719..150721,
150728..150733,150773..150781,150890..150892,
151193..151195,151199..151201,151277..151279,
151391..151393)
/locus_tag="ECBD_0142"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:143434"
misc_feature order(150482..150484,150773..150775,150881..150883,
150890..150892)
/locus_tag="ECBD_0142"
/note="catalytic residues [active]"
/db_xref="CDD:143434"
gene complement(151729..151941)
/locus_tag="ECBD_0143"
/db_xref="GeneID:8156393"
CDS complement(151729..151941)
/locus_tag="ECBD_0143"
/inference="similar to AA sequence:KEGG:SFV_3946"
/note="KEGG: sfv:SFV_3946 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034405.1"
/db_xref="GI:253771574"
/db_xref="GeneID:8156393"
/translation="MCCLVFQQDEVYHIEIVELLAKLMNNSSKTSTVQIKRIKPSIIY
RLLLIGLGSPMVIYGLVRPLTIETRD"
gene 152055..152378
/locus_tag="ECBD_0144"
/db_xref="GeneID:8156394"
CDS 152055..152378
/locus_tag="ECBD_0144"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034406.1"
/db_xref="GI:253771575"
/db_xref="GeneID:8156394"
/translation="MFLDYFALGVLIFVFLVIFYGIIILHDIPYLIAKKRNHPHADAI
HVAGWVSLFTLHVIWPFLWIWATLYRPERGWGMQSHDSSVMQLQQRIAGLEKQLADIK
SSSAE"
misc_feature 152061..152294
/locus_tag="ECBD_0144"
/note="Protein of unknown function (DUF3302); Region:
DUF3302; pfam11742"
/db_xref="CDD:152178"
misc_feature 152286..>152372
/locus_tag="ECBD_0144"
/note="FlxA-like protein; Region: FlxA; pfam14282"
/db_xref="CDD:222647"
gene 152384..153520
/locus_tag="ECBD_0145"
/db_xref="GeneID:8156395"
CDS 152384..153520
/locus_tag="ECBD_0145"
/inference="protein motif:PFAM:PF00529"
/note="PFAM: secretion protein HlyD"
/codon_start=1
/transl_table=11
/product="secretion protein HlyD"
/protein_id="YP_003034407.1"
/db_xref="GI:253771576"
/db_xref="InterPro:IPR006143"
/db_xref="GeneID:8156395"
/translation="MDLLIILTYVAFAWAMFKIFKIPVNKWTIPTATLGGIFIVSGLI
LLMNYNHPYTFKAQKAVISIPVVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQAR
VDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFS
ERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLVLGEHSQIASLKAQLAEAKYNLE
QTIVRAPSDGYVTQVLIRPGTYAASLPLRPVMVFIPDQKRQIVAQFRQNSLLRLAPGD
DAEVVFNALPGKVFSGKLAAISPAVPGGAYQSTGTLQTLNTAPGSDGVIATIELDEHT
DLSALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWVHYLYLDH"
misc_feature 152396..153451
/locus_tag="ECBD_0145"
/note="Multidrug resistance efflux pump [Defense
mechanisms]; Region: EmrA; COG1566"
/db_xref="CDD:224482"
misc_feature 152570..152713
/locus_tag="ECBD_0145"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature 153044..153325
/locus_tag="ECBD_0145"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:222128"
gene complement(153517..154491)
/locus_tag="ECBD_0146"
/db_xref="GeneID:8156396"
CDS complement(153517..154491)
/locus_tag="ECBD_0146"
/inference="protein motif:PFAM:PF00126"
/note="PFAM: regulatory protein LysR; LysR
substrate-binding"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_003034408.1"
/db_xref="GI:253771577"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:8156396"
/translation="MTKLQLKYRELKIISVIAASENISHAATVLGIAQANVSKYLADF
ESKVGLKVFDRTTRQLMLTPFGTALLPYINDMLDRNEQLNNFIADYKHEKRGRVTIYA
PTGIITYLSKHVIDKIKDIGDITLSLKTCNLERNAFYEGVEFPDDCDVLISYAPPKDE
SLVASFITQYAVTAYASQRYLEKHPISRPDELEHHSCILIDSMMIDDANIWRFNVAGS
KEVRDYRVKGNYVCDNTQSALELARNHLGIVFAPDKSVQSDLQDGTLVPCFQQPYEWW
LDLVAIFRKREYQPWRVQYVLDEMLREIRHQLAQSQQLRPEQAAESED"
misc_feature complement(153562..154476)
/locus_tag="ECBD_0146"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:223656"
misc_feature complement(154294..154467)
/locus_tag="ECBD_0146"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:215735"
misc_feature complement(153592..>154047)
/locus_tag="ECBD_0146"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:245600"
gene 154615..155355
/locus_tag="ECBD_0147"
/db_xref="GeneID:8156397"
CDS 154615..155355
/locus_tag="ECBD_0147"
/inference="protein motif:PFAM:PF06629"
/note="PFAM: MltA-interacting MipA family protein;
KEGG: sfv:SFV_3952 outer membrane protein"
/codon_start=1
/transl_table=11
/product="MltA-interacting MipA family protein"
/protein_id="YP_003034409.1"
/db_xref="GI:253771578"
/db_xref="InterPro:IPR010583"
/db_xref="GeneID:8156397"
/translation="MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENT
KAIPLISYEGDSFYVRQTTLGFILSQSEKNELSLTASWMPLEFDPADNDDYAMQQLDK
RDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGV
LYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIVEHVVLMASAGYS
ELPEEITDSPMIDRNESFTFVTGVSWRF"
misc_feature 154615..155352
/locus_tag="ECBD_0147"
/note="Outer membrane protein V [Cell envelope biogenesis,
outer membrane]; Region: OmpV; COG3713"
/db_xref="CDD:226236"
sig_peptide 154615..154680
/locus_tag="ECBD_0147"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.981 at
residue 22"
gene complement(155476..157455)
/locus_tag="ECBD_0148"
/db_xref="GeneID:8156398"
CDS complement(155476..157455)
/locus_tag="ECBD_0148"
/inference="protein motif:PFAM:PF07944"
/note="PFAM: protein of unknown function DUF1680;
KEGG: sfv:SFV_3953 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034410.1"
/db_xref="GI:253771579"
/db_xref="InterPro:IPR012878"
/db_xref="GeneID:8156398"
/translation="MNISEVDLRKLTVSDPFLGQYQQLVRDVVISYQWDALNDRIPEA
EPSHAIENFRIAAGLQEGEFYGMVFQDSDVAKWLEAVAWSLCQKPDAELEKTADEVIE
LIASAQCEDGYLNTYFTVKAPEERWSNLAECHELYCAGHLIEAGVAFFQATGKRRLLE
VVCRLADHIDRVFGPDESKLHGYPGHPEIELALMRLYEVTEEPRYLALTNYFVEQRGA
QPHYYDQEYEKRGQTSHWHTYGPAWMVKDKAYSQAHLSLAQQQTAIGHAVRFVYLMTG
VAHLARLSHDDSKRQDCLRLWNNMAQRQLYITGGIGSQSSGEAFTSDYDLPNDTVYAE
SCASIGLMMFARRMLEMEGDSQYADVMERALYNTVLGGMALDGKHFFYVNPLEVHPKS
LKFNHIYDHVKPIRQRWFGCACCPPNIARVLTSIGHYLYTPREDALYINIYAGNSMEV
PVENGTLRLRVSGNYPWQEQVTIAVESPQPVRHTLALRLPDWCTQPQIILNGEEVEQD
IRKGYLHITREWQEGDTLNLTLPMPVRRVYGNPLVRHVAGKVAIQRGPLVYCLEQADN
GESLHNLWLPTDAPFTTFEGKGLFSHKILIQAPGYRYEQSNPEQQPLWHYDSAPAKRQ
PQTLTFIPWFSWANRGEGEMRIWVNEEKHRHPEVG"
misc_feature complement(155500..157455)
/locus_tag="ECBD_0148"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3533"
/db_xref="CDD:226063"
misc_feature complement(155776..157422)
/locus_tag="ECBD_0148"
/note="Putative glycosyl hydrolase of unknown function
(DUF1680); Region: DUF1680; pfam07944"
/db_xref="CDD:219654"
gene complement(157466..158866)
/locus_tag="ECBD_0149"
/db_xref="GeneID:8156399"
CDS complement(157466..158866)
/locus_tag="ECBD_0149"
/inference="protein motif:TFAM:TIGR00792"
/note="TIGRFAM: sugar (glycoside-Pentoside-Hexuronide)
transporter;
KEGG: sfv:SFV_3954 permease"
/codon_start=1
/transl_table=11
/product="sugar (glycoside-Pentoside-Hexuronide)
transporter"
/protein_id="YP_003034411.1"
/db_xref="GI:253771580"
/db_xref="InterPro:IPR001927"
/db_xref="GeneID:8156399"
/translation="MTSTPITTADIAKGKIDDALSVREKIGYGLGDAGGTVITCLIMN
FLTFFYTDVFGLTPALVGTLFIALRVFDAISDPVMGVIADRTQSRWGRFRPWQLWIAI
PIGIIGILTFTVPDASMGVKIAWAFGTYLLLSVGYTAINVPYCALINTMTTRHNEVIS
CQSWRFVLCGVAGFLVSVGLPWMVDLFGQGNAARGYQLGVGVLCAIAVVMFLCCFFWV
RERVPLSTMGKFTLREHLAGLRNNDQLLLMLVMSFLLINVFNIRGGGYMYFITYVLQG
STGYTSLFFTMVTFASIIGSVIVSPLTRRFDTVKIYYYTNLLLAALAVLMWFLPSGPA
YQTLWLAVILGNGVILGFTLPLHFSLMAFADDYGEWKTRVRSSGMNFAFNLFFIKLAW
ASSAGIISLLFIFVAYQPGVENQTASSLGGIAAMETLLPALFHLLLAGAIRFCKLNNP
MMSRIATDLRQRHVQP"
misc_feature complement(157484..158818)
/locus_tag="ECBD_0149"
/note="melibiose:sodium symporter; Provisional; Region:
PRK10429; cl15392"
/db_xref="CDD:199528"
misc_feature complement(157469..158812)
/locus_tag="ECBD_0149"
/note="Na+/melibiose symporter and related transporters
[Carbohydrate transport and metabolism]; Region: MelB;
COG2211"
/db_xref="CDD:225121"
gene 159092..159907
/locus_tag="ECBD_0150"
/db_xref="GeneID:8156400"
CDS 159092..159907
/locus_tag="ECBD_0150"
/inference="protein motif:PFAM:PF00165"
/note="PFAM: helix-turn-helix- domain containing protein
AraC type; AraC protein arabinose-binding/dimerisation;
SMART: helix-turn-helix- domain containing protein AraC
type;
KEGG: sfv:SFV_3955 transcriptional regulator"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_003034412.1"
/db_xref="GI:253771581"
/db_xref="InterPro:IPR000005"
/db_xref="InterPro:IPR003313"
/db_xref="GeneID:8156400"
/translation="MLELSMTLPIKVQNGGLFISRGVGRHPARRLESWEIIFVEKGRL
TIQEEERIFLIDAGESLLLWPNRQHVGVEDFPADLKFYWLHFEVKAPDSDPRWLTHLS
VPQQTKVVDPQALVALFRQFLSEQEKHQRTPALEFIVLLILQQLTRDARLDEQADGAG
TTLAWKAQKLIRTQYHRPLSTALLARELYCNADYLGRVYRRVFHLTLTEAIHRQRVRE
AEKLLISEARSLTEVAALCGFNDVGYFRQIFRKHTGLTPAAWKRRYSKEHINS"
misc_feature 159164..159499
/locus_tag="ECBD_0150"
/note="AraC-like ligand binding domain; Region:
AraC_binding; pfam02311"
/db_xref="CDD:145456"
misc_feature 159518..159886
/locus_tag="ECBD_0150"
/note="AraC-type DNA-binding domain-containing proteins
[Transcription]; Region: AraC; COG2207"
/db_xref="CDD:225117"
misc_feature 159761..159871
/locus_tag="ECBD_0150"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:215763"
gene complement(159939..160634)
/gene="sgbE"
/locus_tag="ECBD_0151"
/db_xref="GeneID:8156401"
CDS complement(159939..160634)
/gene="sgbE"
/locus_tag="ECBD_0151"
/inference="protein motif:TFAM:TIGR00760"
/note="catalyzes the isomerization of L-ribulose
5-phosphate to D-xylulose 5-phosphate in the anaerobic
catabolism of L-ascorbate; links the arabinose metabolic
pathway to the pentose phosphate pathway and allows the
bacteria to use arabinose as an energy source"
/codon_start=1
/transl_table=11
/product="L-ribulose-5-phosphate 4-epimerase"
/protein_id="YP_003034413.1"
/db_xref="GI:253771582"
/db_xref="InterPro:IPR001303"
/db_xref="InterPro:IPR004661"
/db_xref="GeneID:8156401"
/translation="MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDDTRQWMVIKPS
GVEYDVMTADDMVVVEIASGKAVEGSKKPSSDTPTHLALYRRYAEIGGIVHTHSRHAT
IWSQAGLDLPAWGTTHADYFYGAIPCTRQMTAEEINGEYEYQTGEVIIETFEERGRSP
AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKH
YLRKHGANAYYGQ"
misc_feature complement(159942..160634)
/gene="sgbE"
/locus_tag="ECBD_0151"
/note="L-ribulose-5-phosphate 4-epimerase; Reviewed;
Region: araD; PRK08193"
/db_xref="CDD:236181"
misc_feature complement(159966..160628)
/gene="sgbE"
/locus_tag="ECBD_0151"
/note="Class II Aldolase and Adducin head (N-terminal)
domain. Aldolases are ubiquitous enzymes catalyzing
central steps of carbohydrate metabolism. Based on
enzymatic mechanisms, this superfamily has been divided
into two distinct classes (Class I and II); Region:
Aldolase_II; cd00398"
/db_xref="CDD:238232"
misc_feature complement(order(159978..159980,160038..160040,
160059..160061,160071..160073,160092..160094,
160125..160127,160242..160244,160284..160289,
160293..160295,160314..160322,160335..160340,
160344..160346,160485..160490,160494..160496,
160566..160568,160590..160592,160602..160604))
/gene="sgbE"
/locus_tag="ECBD_0151"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:238232"
misc_feature complement(order(160122..160124,160344..160346,
160350..160352,160407..160415,160500..160505,
160551..160553))
/gene="sgbE"
/locus_tag="ECBD_0151"
/note="active site"
/db_xref="CDD:238232"
misc_feature complement(order(160122..160124,160344..160346,
160350..160352))
/gene="sgbE"
/locus_tag="ECBD_0151"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:238232"
gene complement(160628..161488)
/locus_tag="ECBD_0152"
/db_xref="GeneID:8156402"
CDS complement(160628..161488)
/locus_tag="ECBD_0152"
/EC_number="5.1.3.22"
/inference="protein motif:TFAM:TIGR00542"
/note="L-xylulose 5-phosphate 3-epimerase activity not yet
demonstrated; may be involved in the utilization of
2,3-diketo-L-gulonate"
/codon_start=1
/transl_table=11
/product="L-xylulose 5-phosphate 3-epimerase"
/protein_id="YP_003034414.1"
/db_xref="GI:253771583"
/db_xref="InterPro:IPR004560"
/db_xref="InterPro:IPR012307"
/db_xref="GeneID:8156402"
/translation="MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDER
LSRLDWSTAQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSRDDAVRQRAREIMSKAIR
LARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFM
NSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTE
QSPGQFRDVPFGEGCVDFVGIFKTLHKLNYRGSFLIEMWTEKAKEPVLEIIQARRWIE
ARMQEAGFIC"
misc_feature complement(160637..161485)
/locus_tag="ECBD_0152"
/note="putative L-xylulose 5-phosphate 3-epimerase;
Reviewed; Region: PRK13210"
/db_xref="CDD:237308"
misc_feature complement(160655..161473)
/locus_tag="ECBD_0152"
/note="AP endonuclease family 2; These endonucleases play
a role in DNA repair. Cleave phosphodiester bonds at
apurinic or apyrimidinic sites; the alignment also
contains hexulose-6-phosphate isomerases, enzymes that
catalyze the epimerization of...; Region: AP2Ec; cd00019"
/db_xref="CDD:237986"
misc_feature complement(order(160685..160687,160724..160726,
161249..161251,161378..161380,161462..161464))
/locus_tag="ECBD_0152"
/note="AP (apurinic/apyrimidinic) site pocket; other site"
/db_xref="CDD:237986"
misc_feature complement(order(161237..161239,161246..161251,
161357..161371))
/locus_tag="ECBD_0152"
/note="DNA interaction; other site"
/db_xref="CDD:237986"
misc_feature complement(order(160724..160726,160811..160813,
160817..160819,160862..160864,160931..160933,
160940..160942,161030..161032,161135..161137,
161258..161260))
/locus_tag="ECBD_0152"
/note="Metal-binding active site; metal-binding site"
/db_xref="CDD:237986"
gene complement(161481..162143)
/gene="sgbH"
/locus_tag="ECBD_0153"
/db_xref="GeneID:8156403"
CDS complement(161481..162143)
/gene="sgbH"
/locus_tag="ECBD_0153"
/EC_number="4.1.1.85"
/inference="protein motif:PRIAM:4.1.1.85"
/note="catalyzes the formation of L-xylulose-5-phosphate
from 3-keto-L-gulonate-6-phosphate"
/codon_start=1
/transl_table=11
/product="3-keto-L-gulonate-6-phosphate decarboxylase"
/protein_id="YP_003034415.1"
/db_xref="GI:253771584"
/db_xref="InterPro:IPR001754"
/db_xref="GeneID:8156403"
/translation="MSRPLLQLALDHSSLEAAQRDVTLLKDSVDIVEAGTILCLNEGL
GAVKALREQCPDKIIVADWKVADAGETLAQQAFGAGANWMTIICAAPLATVEKGHAMA
QRCGGEIQIELFGNWTLDDARDWHRIGVRQAIYHRGRDAQASGQQWGEADLARMKALS
DIGLELSITGGITPADLPLFKDIRVKAFIAGRALAGSANPAQVAGDFHAQIDAIWGGK
RA"
misc_feature complement(161523..162134)
/gene="sgbH"
/locus_tag="ECBD_0153"
/note="3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC)
and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC
catalyzes the formation of L-xylulose 5-phosphate and
carbon dioxide from 3-keto-L-gulonate 6-phosphate as part
of the anaerobic pathway for...; Region: KGPDC_HPS;
cd04726"
/db_xref="CDD:240077"
misc_feature complement(order(161568..161573,161631..161633,
161637..161639,161736..161738,161952..161954,
161958..161960,162045..162047,162111..162113,
162117..162119))
/gene="sgbH"
/locus_tag="ECBD_0153"
/note="active site"
/db_xref="CDD:240077"
misc_feature complement(order(161724..161732,161736..161738,
161781..161783,161799..161801,161862..161864,
161877..161879,161919..161921,161937..161945,
162012..162017,162024..162026,162105..162107))
/gene="sgbH"
/locus_tag="ECBD_0153"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:240077"
misc_feature complement(order(161958..161960,162045..162047))
/gene="sgbH"
/locus_tag="ECBD_0153"
/note="magnesium binding site [ion binding]; other site"
/db_xref="CDD:240077"
gene complement(162140..163636)
/locus_tag="ECBD_0154"
/db_xref="GeneID:8156404"
CDS complement(162140..163636)
/locus_tag="ECBD_0154"
/inference="protein motif:PFAM:PF00370"
/note="PFAM: carbohydrate kinase FGGY;
KEGG: sfv:SFV_3959 L-xylulose kinase, cryptic"
/codon_start=1
/transl_table=11
/product="carbohydrate kinase FGGY"
/protein_id="YP_003034416.1"
/db_xref="GI:253771585"
/db_xref="InterPro:IPR000577"
/db_xref="GeneID:8156404"
/translation="MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWA
ERDMAELWQCCMAVIRALLTHSGVSGEQIVGIGISAQGKGLFLLDKNDKPLGNAILSS
DRRAMEIVRRWQEDGIPEKLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTH
DYLRWCLTGVKGCEESNISESNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEIC
GEITAQTAALTGLKAGTPVVGGLFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGL
RDGEAHPYVYGRYVNDGEFIVHEASPTSSGNLEWFTAQWGEISFDEINQAVASLPKAG
GDLFFLPFLYGSNAGLEMTSGFYGMQAIHTRAHLLQAIYEGVVFSHMTHLNRMRERFT
DVHTLRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARVGTGVYHNFSE
AQRDLRHPVRTLLPDMTAHQLYQKKYQRYQHLIAALQGFHARIKEHTL"
misc_feature complement(162155..163636)
/locus_tag="ECBD_0154"
/note="Sugar (pentulose and hexulose) kinases
[Carbohydrate transport and metabolism]; Region: XylB;
COG1070"
/db_xref="CDD:223996"
misc_feature complement(162308..163627)
/locus_tag="ECBD_0154"
/note="L-xylulose kinases; a subfamily of the FGGY family
of carbohydrate kinases; Region: FGGY_L-XK; cd07802"
/db_xref="CDD:212666"
misc_feature complement(order(162323..162328,162332..162337,
162341..162349,162710..162712,162734..162736,
162740..162742,162749..162751,162764..162781,
162791..162799,162833..162835,162842..162844,
162899..162910,162920..162931,162986..162991,
162995..163000,163070..163072,163079..163081,
163085..163087,163100..163102,163109..163117,
163235..163240,163316..163318,163334..163336,
163394..163417,163550..163552,163559..163567,
163574..163579,163583..163585,163589..163591,
163598..163606,163610..163627))
/locus_tag="ECBD_0154"
/note="putative N- and C-terminal domain interface
[polypeptide binding]; other site"
/db_xref="CDD:212666"
misc_feature complement(order(162347..162349,162419..162421,
162425..162433,162680..162682,162710..162712,
162722..162724,162833..162835,162842..162850,
162905..162910,163334..163336,163388..163390,
163394..163396,163589..163591,163595..163606,
163610..163612))
/locus_tag="ECBD_0154"
/note="putative active site [active]"
/db_xref="CDD:212666"
misc_feature complement(order(162419..162421,162425..162433,
162671..162673,162677..162682,162710..162715,
162719..162724,162842..162850,162908..162910,
163589..163591,163595..163606,163610..163612))
/locus_tag="ECBD_0154"
/note="MgATP binding site [chemical binding]; other site"
/db_xref="CDD:212666"
misc_feature complement(order(162908..162910,163601..163603,
163610..163612))
/locus_tag="ECBD_0154"
/note="catalytic site [active]"
/db_xref="CDD:212666"
misc_feature complement(order(162908..162910,163610..163612))
/locus_tag="ECBD_0154"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:212666"
misc_feature complement(order(162740..162742,162905..162910,
163334..163336,163388..163390,163394..163396))
/locus_tag="ECBD_0154"
/note="putative xylulose binding site [chemical binding];
other site"
/db_xref="CDD:212666"
gene complement(163640..164626)
/locus_tag="ECBD_0155"
/db_xref="GeneID:8156405"
CDS complement(163640..164626)
/locus_tag="ECBD_0155"
/inference="protein motif:TFAM:TIGR00787"
/note="TIGRFAM: TRAP dicarboxylate transporter DctP
subunit;
PFAM: TRAP dicarboxylate transporter- DctP subunit;
KEGG: sfv:SFV_3960 solute-binding transporter"
/codon_start=1
/transl_table=11
/product="TRAP dicarboxylate transporter DctP subunit"
/protein_id="YP_003034417.1"
/db_xref="GI:253771586"
/db_xref="InterPro:IPR004682"
/db_xref="GeneID:8156405"
/translation="MKLRSVTYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAA
KKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMN
LLDVPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTP
ADLKGLKIRTNNSPMNIAAFKVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAK
FFEVQKFLSLTHHAYSPLLVVINKAKFDGLSPEFQQALVSSAQEAGNYQRKLVAEDQQ
KIIDGMKEAGVEVITDLDRKAFSDALGNQVRDMFVKDVPQGADLLKAVDEVQ"
misc_feature complement(163643..164626)
/locus_tag="ECBD_0155"
/note="TRAP-type C4-dicarboxylate transport system,
periplasmic component [Carbohydrate transport and
metabolism]; Region: DctP; COG1638"
/db_xref="CDD:224553"
sig_peptide complement(164552..164626)
/locus_tag="ECBD_0155"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.990 at
residue 25"
misc_feature complement(163769..164539)
/locus_tag="ECBD_0155"
/note="tripartite ATP-independent periplasmic transporter
solute receptor, DctP family; Region: dctP; TIGR00787"
/db_xref="CDD:129869"
gene complement(164639..165916)
/locus_tag="ECBD_0156"
/db_xref="GeneID:8156406"
CDS complement(164639..165916)
/locus_tag="ECBD_0156"
/inference="protein motif:TFAM:TIGR00786"
/note="TIGRFAM: TRAP dicarboxylate transporter DctM
subunit;
PFAM: TRAP C4-dicarboxylate transporter permease DctM
subunit"
/codon_start=1
/transl_table=11
/product="TRAP dicarboxylate transporter DctM subunit"
/protein_id="YP_003034418.1"
/db_xref="GI:253771587"
/db_xref="InterPro:IPR004681"
/db_xref="InterPro:IPR010656"
/db_xref="GeneID:8156406"
/translation="MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMA
QTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAM
IMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFG
VSSGLSISKLFMAGIAPGMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIW
ALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTS
VVMFLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTP
TVLILTPVLMPLVKEAGIDPIYFGVMFIINCSIGLITPPIGNVLNVISGVAKLKFDDA
VRGVFPYVLVLYSLLVVFVFIPDLIILPLKWIN"
sig_peptide complement(165845..165916)
/locus_tag="ECBD_0156"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.717) with cleavage site probability 0.524 at
residue 24"
misc_feature complement(164642..165838)
/locus_tag="ECBD_0156"
/note="L-dehydroascorbate transporter large permease
subunit; Provisional; Region: PRK15060"
/db_xref="CDD:185020"
misc_feature complement(164732..165832)
/locus_tag="ECBD_0156"
/note="DctM-like transporters; Region: DctM; pfam06808"
/db_xref="CDD:219185"
gene complement(165919..166392)
/locus_tag="ECBD_0157"
/db_xref="GeneID:8156407"
CDS complement(165919..166392)
/locus_tag="ECBD_0157"
/inference="protein motif:PFAM:PF04290"
/note="membrane-spanning protein involved in uptake of
2,3-diketo-L-gulonate; part of the tri-partite
ATP-independent periplasmic transporter (TRAP) YiaMNO"
/codon_start=1
/transl_table=11
/product="2,3-diketo-L-gulonate TRAP transporter small
permease protein YiaM"
/protein_id="YP_003034419.1"
/db_xref="GI:253771588"
/db_xref="InterPro:IPR007387"
/db_xref="GeneID:8156407"
/translation="MKKILEAILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYL
FVWLTFIGAIVAFMDNAHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLK
TIQDWSDYSPILGLPIGLMYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA"
misc_feature complement(165922..166392)
/locus_tag="ECBD_0157"
/note="2,3-diketo-L-gulonate TRAP transporter small
permease protein YiaM; Provisional; Region: PRK09877"
/db_xref="CDD:182129"
gene complement(166510..166977)
/locus_tag="ECBD_0158"
/db_xref="GeneID:8156408"
CDS complement(166510..166977)
/locus_tag="ECBD_0158"
/inference="protein motif:PFAM:PF04074"
/note="PFAM: conserved hypothetical protein;
KEGG: efe:EFER_3574 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034420.1"
/db_xref="GI:253771589"
/db_xref="InterPro:IPR004375"
/db_xref="GeneID:8156408"
/translation="MIFGHIAQPNPCRLPAAIEKALDFLRATDFNALEPGVVEIDGKN
IYTQIIDLTTREAVVNRPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVSESLLEQRDI
IFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCIMQTASEIRKIVVKVALTALN"
misc_feature complement(166555..166977)
/locus_tag="ECBD_0158"
/note="uncharacterized protein, YhcH/YjgK/YiaL family;
Region: TIGR00022"
/db_xref="CDD:129133"
gene complement(166989..167987)
/locus_tag="ECBD_0159"
/db_xref="GeneID:8156409"
CDS complement(166989..167987)
/locus_tag="ECBD_0159"
/inference="protein motif:PFAM:PF02615"
/note="NAD(P)H-dependent; catalyzes the reduction of
2,3-diketo-L-gulonate to 3-keto-L-gulonate"
/codon_start=1
/transl_table=11
/product="2,3-diketo-L-gulonate reductase"
/protein_id="YP_003034421.1"
/db_xref="GI:253771590"
/db_xref="InterPro:IPR003767"
/db_xref="GeneID:8156409"
/translation="MKVTFEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSH
GVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAA
DHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLI
VAIPSTPITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRI
LPMGYWKGSGMSIVLDMIATLLSDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPT
RDAKLQRIMDYVTSAERADENQAIRLPGHEFTTLLAENRRNGITVDDSVWAKIQAL"
misc_feature complement(166992..167987)
/locus_tag="ECBD_0159"
/note="2,3-diketo-L-gulonate reductase; Provisional;
Region: PRK13260"
/db_xref="CDD:183926"
gene 168188..169036
/locus_tag="ECBD_0160"
/db_xref="GeneID:8156410"
CDS 168188..169036
/locus_tag="ECBD_0160"
/inference="protein motif:PFAM:PF01614"
/note="PFAM: transcriptional regulator IclR ; regulatory
protein IclR;
SMART: regulatory protein IclR;
KEGG: sbo:SBO_3582 regulator"
/codon_start=1
/transl_table=11
/product="transcriptional regulator, IclR family"
/protein_id="YP_003034422.1"
/db_xref="GI:253771591"
/db_xref="InterPro:IPR005471"
/db_xref="InterPro:IPR014757"
/db_xref="GeneID:8156410"
/translation="MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCP
LAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIH
IAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMG
KIYMAFGHPDYVKSYWESHQHEIQPLTRNTITELPAMFDELAHIRESGAAMDREENEL
GVSCIAVPVFDIYGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRD
DLGAIT"
misc_feature 168257..169000
/locus_tag="ECBD_0160"
/note="Transcriptional regulator [Transcription]; Region:
IclR; COG1414"
/db_xref="CDD:224332"
misc_feature 168257..168523
/locus_tag="ECBD_0160"
/note="helix_turn_helix isocitrate lyase regulation;
Region: HTH_ICLR; smart00346"
/db_xref="CDD:214629"
misc_feature 168611..168994
/locus_tag="ECBD_0160"
/note="Bacterial transcriptional regulator; Region: IclR;
pfam01614"
/db_xref="CDD:201890"
gene 169138..169611
/locus_tag="ECBD_0161"
/db_xref="GeneID:8156411"
CDS 169138..169611
/locus_tag="ECBD_0161"
/inference="protein motif:PFAM:PF00037"
/note="PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain
protein;
KEGG: sbo:SBO_3581 hypothetical protein"
/codon_start=1
/transl_table=11
/product="4Fe-4S ferredoxin iron-sulfur binding domain
protein"
/protein_id="YP_003034423.1"
/db_xref="GI:253771592"
/db_xref="InterPro:IPR001080"
/db_xref="InterPro:IPR001450"
/db_xref="InterPro:IPR017900"
/db_xref="GeneID:8156411"
/translation="MNRFIIADATKCIGCRTCEVACAVSHHENQDCAALSPDEFISRI
RVIKDHCWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFG
AMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV"
misc_feature 169138..169596
/locus_tag="ECBD_0161"
/note="Fe-S-cluster-containing hydrogenase components 2
[Energy production and conversion]; Region: HycB; COG1142"
/db_xref="CDD:224065"
misc_feature <169252..169458
/locus_tag="ECBD_0161"
/note="RPB11 and RPB3 subunits of RNA polymerase; Region:
RNAP_RPB11_RPB3; cl11409"
/db_xref="CDD:245605"
gene complement(169762..171015)
/gene="avtA"
/locus_tag="ECBD_0162"
/db_xref="GeneID:8156412"
CDS complement(169762..171015)
/gene="avtA"
/locus_tag="ECBD_0162"
/inference="protein motif:PFAM:PF00155"
/note="transaminase C; catalyzes transamination of
alanine, valine, and 2-aminobutyrate with their respective
2-keto acids; also catalyzes terminal step in valine
biosynthesis"
/codon_start=1
/transl_table=11
/product="valine--pyruvate transaminase"
/protein_id="YP_003034424.1"
/db_xref="GI:253771593"
/db_xref="InterPro:IPR004839"
/db_xref="GeneID:8156412"
/translation="MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIP
EMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIAL
TNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELL
PEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVID
NAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGI
ISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHK
PEGAIFLWLWFKDLPITTEQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYV
PEPEKIEAGVKILAEEIERAWAESH"
misc_feature complement(169768..171015)
/gene="avtA"
/locus_tag="ECBD_0162"
/note="valine--pyruvate transaminase; Provisional; Region:
avtA; PRK09440"
/db_xref="CDD:236517"
misc_feature complement(169795..170811)
/gene="avtA"
/locus_tag="ECBD_0162"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature complement(order(170248..170250,170269..170274,
170278..170280,170353..170355,170446..170448,
170605..170607,170695..170703))
/gene="avtA"
/locus_tag="ECBD_0162"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature complement(order(170152..170154,170161..170163,
170248..170256,170374..170376,170557..170559,
170692..170694))
/gene="avtA"
/locus_tag="ECBD_0162"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature complement(170269..170271)
/gene="avtA"
/locus_tag="ECBD_0162"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
STS 171027..171377
/standard_name="D8S438"
/db_xref="UniSTS:52726"
gene complement(171193..173223)
/gene="malS"
/locus_tag="ECBD_0163"
/db_xref="GeneID:8156413"
CDS complement(171193..173223)
/gene="malS"
/locus_tag="ECBD_0163"
/inference="protein motif:PFAM:PF00128"
/note="periplasmic enzyme that degrades maltodextrins that
enter via the outer membrane porin LamB; hydrolyzes
alpha-(1,4) glycosidic linkages; contains internal
disulfide bonds"
/codon_start=1
/transl_table=11
/product="periplasmic alpha-amylase precursor"
/protein_id="YP_003034425.1"
/db_xref="GI:253771594"
/db_xref="InterPro:IPR006047"
/db_xref="InterPro:IPR006589"
/db_xref="GeneID:8156413"
/translation="MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPK
GTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQIDTRSGTPT
LMISIQNAAEPVASLVRECPKWDGLPLTVDVSATFPEGAAVRDYYSQQIAIVKNGQIM
LQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMA
EIGTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYY
TQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYL
SGDEVKKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNP
GFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLTHWLSQWVR
DYGIDGFRVDTAKHVELPAWQQLKTEASTALREWKKANPDKALDDKPFWMTGEAWGHG
VMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDT
RLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSA
ASVAHWQKISQFRARHPAIGAGKQTTLLLKQGYGFVREHGDDKVLVVWAGQQ"
misc_feature complement(171196..173223)
/gene="malS"
/locus_tag="ECBD_0163"
/note="alpha-amylase; Reviewed; Region: malS; PRK09505"
/db_xref="CDD:236543"
sig_peptide complement(173170..173223)
/gene="malS"
/locus_tag="ECBD_0163"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.723 at
residue 18"
misc_feature complement(171406..172656)
/gene="malS"
/locus_tag="ECBD_0163"
/note="Alpha amylase catalytic domain family; Region:
AmyAc_family; cl07893"
/db_xref="CDD:244824"
misc_feature complement(order(171529..171534,171715..171717,
171844..171846,171850..171852,172279..172281))
/gene="malS"
/locus_tag="ECBD_0163"
/note="active site"
/db_xref="CDD:200451"
misc_feature complement(order(171529..171531,171715..171717,
171844..171846))
/gene="malS"
/locus_tag="ECBD_0163"
/note="catalytic site [active]"
/db_xref="CDD:200451"
gene 173543..174367
/locus_tag="ECBD_0164"
/db_xref="GeneID:8156414"
CDS 173543..174367
/locus_tag="ECBD_0164"
/inference="protein motif:PFAM:PF01832"
/note="PFAM: mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase;
SMART: Lysozyme subfamily 2;
KEGG: sfv:SFV_3970 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034426.1"
/db_xref="GI:253771595"
/db_xref="InterPro:IPR002901"
/db_xref="InterPro:IPR013338"
/db_xref="GeneID:8156414"
/translation="MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKAS
NKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWL
ISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPA
YSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM"
misc_feature 173543..174364
/locus_tag="ECBD_0164"
/note="hypothetical protein; Provisional; Region:
PRK10356"
/db_xref="CDD:182404"
sig_peptide 173543..173626
/locus_tag="ECBD_0164"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.998) with cleavage site probability 0.989 at
residue 28"
misc_feature 173576..174364
/locus_tag="ECBD_0164"
/note="Uncharacterized FlgJ-related protein [General
function prediction only]; Region: Bax; COG2992"
/db_xref="CDD:225539"
gene complement(174563..175741)
/locus_tag="ECBD_0165"
/db_xref="GeneID:8156415"
CDS complement(174563..175741)
/locus_tag="ECBD_0165"
/inference="protein motif:PFAM:PF00165"
/note="PFAM: helix-turn-helix- domain containing protein
AraC type;
SMART: helix-turn-helix- domain containing protein AraC
type;
KEGG: sbc:SbBS512_E3953 xylose operon regulatory protein"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_003034427.1"
/db_xref="GI:253771596"
/db_xref="InterPro:IPR000005"
/db_xref="GeneID:8156415"
/translation="MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED
FRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATD
NYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL
ETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGI
DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS
TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI
HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML
"
misc_feature complement(174911..175723)
/locus_tag="ECBD_0165"
/note="Ligand-binding domain of DNA transcription
repressor specific for xylose (XylR); Region: PBP1_XylR;
cd01543"
/db_xref="CDD:107256"
misc_feature complement(order(175130..175135,175142..175144,
175154..175156,175238..175240,175574..175582,
175589..175591,175598..175600,175613..175615,
175619..175633,175658..175663,175667..175672,
175679..175687,175721..175723))
/locus_tag="ECBD_0165"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:107256"
misc_feature complement(174911..>175690)
/locus_tag="ECBD_0165"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:224525"
misc_feature complement(order(175031..175033,175085..175087,
175247..175249,175325..175327,175439..175441,
175490..175492,175553..175555,175676..175678,
175685..175690))
/locus_tag="ECBD_0165"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107256"
misc_feature complement(174737..174862)
/locus_tag="ECBD_0165"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:215763"
misc_feature complement(174590..174841)
/locus_tag="ECBD_0165"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature complement(174590..174703)
/locus_tag="ECBD_0165"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:215763"
gene complement(175819..177000)
/locus_tag="ECBD_0166"
/db_xref="GeneID:8156416"
CDS complement(175819..177000)
/locus_tag="ECBD_0166"
/inference="protein motif:PFAM:PF02653"
/note="PFAM: inner-membrane translocator;
KEGG: sbc:SbBS512_E3954 D-xylose ABC transporter permease"
/codon_start=1
/transl_table=11
/product="inner-membrane translocator"
/protein_id="YP_003034428.1"
/db_xref="GI:253771597"
/db_xref="InterPro:IPR001851"
/db_xref="GeneID:8156416"
/translation="MSKSNPSEVKLAVPTSGSFSGLKSLNLQVFVMIAAIIAIMLFFT
WTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICD
VWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGT
TVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVV
GRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMETRTAFGRRIYAIGGNLE
AARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGG
TSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRR
S"
misc_feature complement(175852..176835)
/locus_tag="ECBD_0166"
/note="Branched-chain amino acid transport system /
permease component; Region: BPD_transp_2; pfam02653"
/db_xref="CDD:217165"
misc_feature complement(175843..176811)
/locus_tag="ECBD_0166"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature complement(176119..176175)
/locus_tag="ECBD_0166"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene complement(176978..178518)
/locus_tag="ECBD_0167"
/pseudo
/db_xref="GeneID:8156417"
gene complement(178595..179587)
/gene="xylF"
/locus_tag="ECBD_0168"
/db_xref="GeneID:8157020"
CDS complement(178595..179587)
/gene="xylF"
/locus_tag="ECBD_0168"
/inference="protein motif:TFAM:TIGR02634"
/note="periplasmic substrate-binding component of the
ATP-dependent xylose transporter; high affinity"
/codon_start=1
/transl_table=11
/product="D-xylose transporter subunit XylF"
/protein_id="YP_003034429.1"
/db_xref="GI:253771598"
/db_xref="InterPro:IPR001761"
/db_xref="InterPro:IPR013456"
/db_xref="GeneID:8157020"
/translation="MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDR
DIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA
KQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNN
AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVAS
NDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAE
IAVELGNGQEPKADTSLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL"
misc_feature complement(178598..179587)
/gene="xylF"
/locus_tag="ECBD_0168"
/note="D-xylose transporter subunit XylF; Provisional;
Region: xylF; PRK10355"
/db_xref="CDD:182403"
sig_peptide complement(179516..179587)
/gene="xylF"
/locus_tag="ECBD_0168"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.995 at
residue 24"
misc_feature complement(178667..179509)
/gene="xylF"
/locus_tag="ECBD_0168"
/note="Periplasmic xylose-binding component of the
ABC-type transport systems that belong to a family of
pentose/hexose sugar-binding proteins of the type I
periplasmic binding protein (PBP1) superfamily; Region:
PBP1_ABC_xylose_binding; cd01538"
/db_xref="CDD:107251"
misc_feature complement(order(178793..178795,178853..178855,
179096..179098,179249..179251,179471..179473))
/gene="xylF"
/locus_tag="ECBD_0168"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107251"
gene 179953..181275
/locus_tag="ECBD_0169"
/db_xref="GeneID:8157021"
CDS 179953..181275
/locus_tag="ECBD_0169"
/EC_number="5.3.1.5"
/inference="protein motif:TFAM:TIGR02630"
/note="catalyzes the interconversion of D-xylose to
D-xylulose"
/codon_start=1
/transl_table=11
/product="xylose isomerase"
/protein_id="YP_003034430.1"
/db_xref="GI:253771599"
/db_xref="InterPro:IPR001998"
/db_xref="InterPro:IPR012307"
/db_xref="InterPro:IPR013452"
/db_xref="GeneID:8157021"
/translation="MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRF
AACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHD
VDVSPEGASLKEYINNFAQMVDVLAGKQEESGVKLLWGTANCFTNPRYGAGAATNPDP
EVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVE
HKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAG
HSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTG
GLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNS
ELGQQILKGQMSLADLAKYAQEHNLSPVHQSGRQEQLENLVNHYLFDK"
misc_feature 179959..181269
/locus_tag="ECBD_0169"
/note="xylose isomerase; Provisional; Region: PRK05474"
/db_xref="CDD:235487"
misc_feature 179962..181263
/locus_tag="ECBD_0169"
/note="xylose isomerase; Region: xylose_isom_A; TIGR02630"
/db_xref="CDD:233956"
gene 181347..182801
/locus_tag="ECBD_0170"
/db_xref="GeneID:8157022"
CDS 181347..182801
/locus_tag="ECBD_0170"
/inference="protein motif:TFAM:TIGR01312"
/note="TIGRFAM: xylulokinase;
PFAM: carbohydrate kinase FGGY;
KEGG: sfv:SFV_3976 xylulokinase"
/codon_start=1
/transl_table=11
/product="xylulokinase"
/protein_id="YP_003034431.1"
/db_xref="GI:253771600"
/db_xref="InterPro:IPR000577"
/db_xref="InterPro:IPR006000"
/db_xref="GeneID:8157022"
/translation="MYIGIDLGTSGVKVILLNEQGEVVASQTEKLTVSRPHPLWSEQD
PEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCA
QECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRM
TGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAK
AWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHS
FCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLS
GERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTL
IGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLP
LEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA"
misc_feature 181347..182798
/locus_tag="ECBD_0170"
/note="xylulokinase; Provisional; Region: PRK15027"
/db_xref="CDD:184987"
misc_feature 181347..182777
/locus_tag="ECBD_0170"
/note="Escherichia coli xylulokinase-like D-xylulose
kinases; a subgroup of the FGGY family of carbohydrate
kinases; Region: FGGY_D-XK_EcXK-like; cd07808"
/db_xref="CDD:198374"
misc_feature order(181350..181364,181383..181385,181389..181391,
181395..181397,181407..181409,181554..181565,
181692..181694,181701..181712,181716..181718,
181725..181727,181848..181853,181860..181865,
181881..181883,181890..181892,181956..181964,
181968..181970,182028..182030,182034..182036,
182043..182072,182088..182090,182094..182096,
182118..182120,182124..182126,182142..182144,
182148..182150,182154..182156,182169..182186,
182190..182201,182208..182210,182616..182657,
182688..182693)
/locus_tag="ECBD_0170"
/note="N- and C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:198374"
misc_feature order(181362..181364,181368..181379,181383..181385,
181572..181580,181632..181634,182043..182048,
182103..182111,182208..182210,182229..182234,
182238..182243,182274..182279,182283..182285,
182526..182534,182541..182543)
/locus_tag="ECBD_0170"
/note="active site"
/db_xref="CDD:198374"
misc_feature order(181362..181364,181368..181379,181383..181385,
182043..182045,182103..182111,182229..182234,
182238..182243,182274..182279,182283..182285,
182526..182534,182541..182543)
/locus_tag="ECBD_0170"
/note="MgATP binding site [chemical binding]; other site"
/db_xref="CDD:198374"
misc_feature order(181362..181364,181371..181373,182043..182045)
/locus_tag="ECBD_0170"
/note="catalytic site [active]"
/db_xref="CDD:198374"
misc_feature order(181362..181364,182043..182045)
/locus_tag="ECBD_0170"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:198374"
misc_feature order(181572..181580,181632..181634,182043..182048,
182208..182210)
/locus_tag="ECBD_0170"
/note="xylulose binding site [chemical binding]; other
site"
/db_xref="CDD:198374"
misc_feature order(182244..182246,182253..182258,182379..182402,
182412..182420,182427..182429)
/locus_tag="ECBD_0170"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:198374"
gene 182970..183311
/locus_tag="ECBD_0171"
/db_xref="GeneID:8157023"
CDS 182970..183311
/locus_tag="ECBD_0171"
/inference="protein motif:PFAM:PF05360"
/note="PFAM: YiaAB two helix domain protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034432.1"
/db_xref="GI:253771601"
/db_xref="InterPro:IPR008024"
/db_xref="GeneID:8157023"
/translation="MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTAT
FGNYAYLRAEKLGQLDDFFTHICQLVALITIGLLFIGVLNAPINTYEMVIYPIAFFVC
LFGQMRLFRSA"
misc_feature 182970..183308
/locus_tag="ECBD_0171"
/note="hypothetical protein; Provisional; Region:
PRK11403"
/db_xref="CDD:183119"
sig_peptide 182970..183065
/locus_tag="ECBD_0171"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.691) with cleavage site probability 0.553 at
residue 32"
misc_feature 182979..183134
/locus_tag="ECBD_0171"
/note="yiaA/B two helix domain; Region: YiaAB; pfam05360"
/db_xref="CDD:114102"
gene 183357..183794
/locus_tag="ECBD_0172"
/db_xref="GeneID:8157024"
CDS 183357..183794
/locus_tag="ECBD_0172"
/inference="protein motif:PFAM:PF05360"
/note="PFAM: YiaAB two helix domain protein;
KEGG: sfv:SFV_3978 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034433.1"
/db_xref="GI:253771602"
/db_xref="InterPro:IPR008024"
/db_xref="GeneID:8157024"
/translation="MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYY
FAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLS
EKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE"
misc_feature 183357..183791
/locus_tag="ECBD_0172"
/note="hypothetical protein; Provisional; Region:
PRK11383"
/db_xref="CDD:105206"
misc_feature 183390..183548
/locus_tag="ECBD_0172"
/note="yiaA/B two helix domain; Region: YiaAB; pfam05360"
/db_xref="CDD:114102"
misc_feature 183579..183737
/locus_tag="ECBD_0172"
/note="yiaA/B two helix domain; Region: YiaAB; pfam05360"
/db_xref="CDD:114102"
gene complement(183836..184831)
/locus_tag="ECBD_0173"
/db_xref="GeneID:8157025"
CDS complement(183836..184831)
/locus_tag="ECBD_0173"
/inference="protein motif:PFAM:PF01757"
/note="PFAM: acyltransferase 3;
KEGG: sdy:SDY_4340 hypothetical protein"
/codon_start=1
/transl_table=11
/product="acyltransferase 3"
/protein_id="YP_003034434.1"
/db_xref="GI:253771603"
/db_xref="InterPro:IPR002656"
/db_xref="GeneID:8157025"
/translation="MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIAN
VLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIGLCLFFYSAIALLYIALFTSINV
ELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMVVIGIIANPNTV
PQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAVLFVTGVFII
SRGTLYELQWRGNFADTWYLYCGPMVFICAIALLTLIKNTLDTRTIRGLGLISRHSLG
IYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSMLVQRIDRNRLVS"
misc_feature complement(183839..184831)
/locus_tag="ECBD_0173"
/note="Predicted O-acyltransferase [General function
prediction only]; Region: COG3274"
/db_xref="CDD:225813"
misc_feature complement(183905..184819)
/locus_tag="ECBD_0173"
/note="Acyltransferase family; Region: Acyl_transf_3;
pfam01757"
/db_xref="CDD:216682"
STS 183937..184083
/standard_name="G01977"
/db_xref="UniSTS:48310"
gene 185006..185305
/locus_tag="ECBD_0174"
/db_xref="GeneID:8157026"
CDS 185006..185305
/locus_tag="ECBD_0174"
/inference="similar to AA sequence:KEGG:SFV_3980"
/note="KEGG: sfv:SFV_3980 lipoprotein"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_003034435.1"
/db_xref="GI:253771604"
/db_xref="GeneID:8157026"
/translation="MMMNAFFPAMALMVLVGCSTPPPEQKAQRVKVDPIRSLNMEALC
KDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR"
misc_feature 185006..>185122
/locus_tag="ECBD_0174"
/note="Outer membrane lipoprotein Slp family; Region: Slp;
cl01164"
/db_xref="CDD:242339"
sig_peptide 185006..185086
/locus_tag="ECBD_0174"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.749) with cleavage site probability 0.583 at
residue 27"
misc_feature 185072..185302
/locus_tag="ECBD_0174"
/note="YsaB-like lipoprotein; Region: YsaB; pfam13983"
/db_xref="CDD:206153"
gene 185400..186311
/gene="glyQ"
/locus_tag="ECBD_0175"
/db_xref="GeneID:8157027"
CDS 185400..186311
/gene="glyQ"
/locus_tag="ECBD_0175"
/EC_number="6.1.1.14"
/inference="protein motif:TFAM:TIGR00388"
/note="glycine--tRNA ligase alpha chain; GlyRS; class II
aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2);
catalyzes a two-step reaction; first charging a glycine
molecule by linking its carboxyl group to the
alpha-phosphate of ATP; second by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="glycyl-tRNA synthetase subunit alpha"
/protein_id="YP_003034436.1"
/db_xref="GI:253771605"
/db_xref="InterPro:IPR002310"
/db_xref="InterPro:IPR006194"
/db_xref="GeneID:8157027"
/translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMT
CLRALGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSL
KELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
GEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDF
LFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRI
RTLTKAVAEAYYASREALGFPMCNKDK"
misc_feature 185421..186275
/gene="glyQ"
/locus_tag="ECBD_0175"
/note="Class II Glycyl-tRNA synthetase (GlyRS) alpha
subunit core catalytic domain. GlyRS functions as a
homodimer in eukaryotes, archaea and some bacteria and as
a heterotetramer in the remainder of prokaryotes and in
arabidopsis. It is responsible for the...; Region:
GlyRS_alpha_core; cd00733"
/db_xref="CDD:238375"
misc_feature order(185427..185429,185439..185441,185451..185453,
185475..185480,185484..185486,185490..185501,
185547..185549,185574..185576,185586..185588,
185634..185636,185952..185954,186003..186005,
186012..186017,186036..186038,186042..186044,
186051..186053,186060..186065,186072..186077,
186090..186092,186099..186101,186111..186113,
186117..186128,186135..186137,186147..186149)
/gene="glyQ"
/locus_tag="ECBD_0175"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238375"
misc_feature 185472..185495
/gene="glyQ"
/locus_tag="ECBD_0175"
/note="motif 1; other site"
/db_xref="CDD:238375"
misc_feature order(185508..185510,185514..185516,185589..185591,
185637..185639,185643..185645,185649..185657,
185820..185825,185835..185837,185883..185888,
185892..185897,185901..185906)
/gene="glyQ"
/locus_tag="ECBD_0175"
/note="active site"
/db_xref="CDD:238375"
misc_feature 185586..185597
/gene="glyQ"
/locus_tag="ECBD_0175"
/note="motif 2; other site"
/db_xref="CDD:238375"
misc_feature 185895..185906
/gene="glyQ"
/locus_tag="ECBD_0175"
/note="motif 3; other site"
/db_xref="CDD:238375"
gene 186321..188390
/gene="glyS"
/locus_tag="ECBD_0176"
/db_xref="GeneID:8157028"
CDS 186321..188390
/gene="glyS"
/locus_tag="ECBD_0176"
/EC_number="6.1.1.14"
/inference="protein motif:TFAM:TIGR00211"
/note="glycine--tRNA ligase beta chain; glyS; class II
aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2);
catalyzes a two-step reaction; first charging a glycine
molecule by linking the carboxyl group to the
alpha-phosphate of ATP; second by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="glycyl-tRNA synthetase subunit beta"
/protein_id="YP_003034437.1"
/db_xref="GI:253771606"
/db_xref="InterPro:IPR002311"
/db_xref="InterPro:IPR006194"
/db_xref="InterPro:IPR008909"
/db_xref="InterPro:IPR015944"
/db_xref="GeneID:8157028"
/translation="MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGT
VQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITV
DQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRP
VHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIAD
YEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEA
LVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFF
NTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL
SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC
ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV
RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKA
VSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDK
LEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV
ADISLLQ"
misc_feature 186321..188387
/gene="glyS"
/locus_tag="ECBD_0176"
/note="glycyl-tRNA synthetase, tetrameric type, beta
subunit; Region: glyS; TIGR00211"
/db_xref="CDD:232875"
misc_feature 188070..188357
/gene="glyS"
/locus_tag="ECBD_0176"
/note="DALR anticodon binding domain; Region: DALR_1;
pfam05746"
/db_xref="CDD:218729"
misc_feature order(188073..188078,188082..188087,188265..188267,
188274..188276)
/gene="glyS"
/locus_tag="ECBD_0176"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153408"
misc_feature order(188073..188075,188082..188087,188274..188276)
/gene="glyS"
/locus_tag="ECBD_0176"
/note="anticodon binding site; other site"
/db_xref="CDD:153408"
gene complement(188669..189520)
/locus_tag="ECBD_0177"
/db_xref="GeneID:8157029"
CDS complement(188669..189520)
/locus_tag="ECBD_0177"
/inference="protein motif:PFAM:PF00665"
/note="PFAM: Integrase catalytic region;
KEGG: sfv:SFV_3530 IS150 ORF2"
/codon_start=1
/transl_table=11
/product="Integrase catalytic region"
/protein_id="YP_003034438.1"
/db_xref="GI:253771607"
/db_xref="InterPro:IPR001584"
/db_xref="GeneID:8157029"
/translation="MKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVK
KRISEIYHENRGRYGYRRVTLSLHREGKQINHKAVQRLMGTLSLKAAIKVKRYRSYRG
EVGQTAPNVLQRDFKATRPNEKWVTDVTEFAVNGRKLYLSPVIDLFNNEVISYSLSER
PVMNMVENMLDQAFKKLNPHEHPVLHSDQGWQYRMRRYQNILKEHGIKQSMSRKGNCL
DNAVVECFFGTLKSECFYLDEFSNISELKDAVTEYIEYYNSRRISLKLKGLTPIEYRN
QTYMPRV"
misc_feature complement(188684..189457)
/locus_tag="ECBD_0177"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
misc_feature complement(189233..189394)
/locus_tag="ECBD_0177"
/note="HTH-like domain; Region: HTH_21; pfam13276"
/db_xref="CDD:222019"
misc_feature complement(188819..189160)
/locus_tag="ECBD_0177"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:216050"
misc_feature complement(188687..188851)
/locus_tag="ECBD_0177"
/note="Integrase core domain; Region: rve_2; pfam13333"
/db_xref="CDD:205513"
gene complement(189517..190038)
/locus_tag="ECBD_0178"
/db_xref="GeneID:8157030"
CDS complement(189517..190038)
/locus_tag="ECBD_0178"
/inference="similar to AA sequence:KEGG:S1483"
/note="KEGG: sfx:S1483 IS103 orf"
/codon_start=1
/transl_table=11
/product="IS103 orf"
/protein_id="YP_003034439.1"
/db_xref="GI:253771608"
/db_xref="GeneID:8157030"
/translation="MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVA
LYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLK
VYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMY
LKKLKALAHPTKK"
misc_feature complement(189700..190038)
/locus_tag="ECBD_0178"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG2963"
/db_xref="CDD:225511"
misc_feature complement(189859..190011)
/locus_tag="ECBD_0178"
/note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
/db_xref="CDD:222191"
misc_feature complement(189691..189837)
/locus_tag="ECBD_0178"
/note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
/db_xref="CDD:222191"
gene 190118..190270
/locus_tag="ECBD_0179"
/db_xref="GeneID:8157031"
CDS 190118..190270
/locus_tag="ECBD_0179"
/inference="protein motif:PFAM:PF01848"
/note="PFAM: Hok/gef cell toxic protein;
KEGG: elf:LF82_1021 protein HokA"
/codon_start=1
/transl_table=11
/product="small toxic polypeptide"
/protein_id="YP_003034440.1"
/db_xref="GI:253771609"
/db_xref="InterPro:IPR000021"
/db_xref="GeneID:8157031"
/translation="MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFL
ACKLKE"
misc_feature 190118..190267
/locus_tag="ECBD_0179"
/note="small toxic polypeptide; Provisional; Region:
PRK09759"
/db_xref="CDD:182063"
gene complement(190457..190669)
/locus_tag="ECBD_0180"
/db_xref="GeneID:8157032"
CDS complement(190457..190669)
/locus_tag="ECBD_0180"
/inference="protein motif:PFAM:PF00313"
/note="PFAM: Cold-shock protein DNA-binding;
SMART: Cold shock protein;
KEGG: sea:SeAg_B3864 major cold shock protein"
/codon_start=1
/transl_table=11
/product="major cold shock protein"
/protein_id="YP_003034441.1"
/db_xref="GI:253771610"
/db_xref="InterPro:IPR002059"
/db_xref="InterPro:IPR011129"
/db_xref="GeneID:8157032"
/translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKS
LDEGQKVSFTIESGAKGPAAGNVTSL"
misc_feature complement(190466..190657)
/locus_tag="ECBD_0180"
/note="Cold-Shock Protein (CSP) contains an S1-like
cold-shock domain (CSD) that is found in eukaryotes,
prokaryotes, and archaea. CSP's include the major
cold-shock proteins CspA and CspB in bacteria and the
eukaryotic gene regulatory factor Y-box...; Region:
CSP_CDS; cd04458"
/db_xref="CDD:239905"
misc_feature complement(order(190490..190492,190577..190579,
190610..190612,190637..190639))
/locus_tag="ECBD_0180"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:239905"
misc_feature complement(order(190571..190582,190601..190621))
/locus_tag="ECBD_0180"
/note="RNA-binding motif; other site"
/db_xref="CDD:239905"
gene complement(190950..191240)
/locus_tag="ECBD_0181"
/db_xref="GeneID:8157033"
CDS complement(190950..191240)
/locus_tag="ECBD_0181"
/inference="protein motif:SMART:SM00530"
/note="SMART: helix-turn-helix domain protein;
KEGG: sdy:SDY_4348 transcriptional regulator"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_003034442.1"
/db_xref="GI:253771611"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:8157033"
/translation="MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKG
TGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME"
misc_feature complement(190962..191240)
/locus_tag="ECBD_0181"
/note="Predicted transcriptional regulator
[Transcription]; Region: COG2944"
/db_xref="CDD:225495"
misc_feature complement(<190998..191129)
/locus_tag="ECBD_0181"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:238045"
misc_feature complement(order(191037..191039,191112..191114,
191124..191126))
/locus_tag="ECBD_0181"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238045"
misc_feature complement(order(191040..191042,191115..191117))
/locus_tag="ECBD_0181"
/note="salt bridge; other site"
/db_xref="CDD:238045"
misc_feature complement(order(191034..191039,191049..191051,
191058..191060,191091..191096))
/locus_tag="ECBD_0181"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
gene 191405..191557
/locus_tag="ECBD_0182"
/db_xref="GeneID:8157034"
CDS 191405..191557
/locus_tag="ECBD_0182"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034443.1"
/db_xref="GI:253771612"
/db_xref="GeneID:8157034"
/translation="MPIYLLPLLFCKDFENLTFCEGVNLWLQKRQRHYHFLTMKQQIN
LVSFSP"
gene 191674..192384
/locus_tag="ECBD_0183"
/db_xref="GeneID:8157035"
CDS 191674..192384
/locus_tag="ECBD_0183"
/inference="similar to AA sequence:KEGG:SDY_4349"
/note="KEGG: sdy:SDY_4349 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034444.1"
/db_xref="GI:253771613"
/db_xref="GeneID:8157035"
/translation="MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNT
VMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQ
DYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTP
ADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLP
AQHQAFNQAWTTAVTATQ"
misc_feature 191695..192378
/locus_tag="ECBD_0183"
/note="Protein of unknown function (DUF3053); Region:
DUF3053; pfam11254"
/db_xref="CDD:151696"
gene complement(192434..193408)
/locus_tag="ECBD_0184"
/db_xref="GeneID:8157036"
CDS complement(192434..193408)
/locus_tag="ECBD_0184"
/inference="protein motif:PFAM:PF02826"
/note="PFAM: D-isomer specific 2-hydroxyacid dehydrogenase
NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase
catalytic region;
KEGG: sbc:SbBS512_E3973 2-ketogluconate reductase"
/codon_start=1
/transl_table=11
/product="D-isomer specific 2-hydroxyacid dehydrogenase
NAD-binding"
/protein_id="YP_003034445.1"
/db_xref="GI:253771614"
/db_xref="InterPro:IPR006139"
/db_xref="InterPro:IPR006140"
/db_xref="GeneID:8157036"
/translation="MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFA
EAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTET
VADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMAL
AQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLF
GAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLS
MANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNPHVAD"
misc_feature complement(192440..193408)
/locus_tag="ECBD_0184"
/note="bifunctional glyoxylate/hydroxypyruvate reductase
B; Provisional; Region: PRK15409"
/db_xref="CDD:185307"
misc_feature complement(192476..193402)
/locus_tag="ECBD_0184"
/note="D-glycerate dehydrogenase/hydroxypyruvate reductase
(GDH); Region: GDH; cd05301"
/db_xref="CDD:240626"
misc_feature complement(order(192527..192529,192533..192544,
192548..192568,192584..192586,192608..192613,
192905..192910,192920..192925,192977..192991,
192992..193012,193019..193021,193025..193027,
193031..193033,193055..193057,193061..193063,
193073..193075,193082..193087,193091..193096,
193103..193108,193190..193192,193250..193252,
193253..193255,193373..193375,193379..193384))
/locus_tag="ECBD_0184"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:240626"
misc_feature complement(order(192545..192547,192554..192556,
192698..192700,193112..193114,193181..193189))
/locus_tag="ECBD_0184"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:240626"
misc_feature complement(order(192545..192550,192554..192556,
192623..192628,192698..192706,192767..192772,
192782..192790,192869..192871,192878..192886,
192941..192955,193100..193102,193181..193186))
/locus_tag="ECBD_0184"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:240626"
misc_feature complement(order(192554..192556,192611..192613,
192698..192700))
/locus_tag="ECBD_0184"
/note="catalytic site [active]"
/db_xref="CDD:240626"
gene complement(193512..194171)
/locus_tag="ECBD_0185"
/db_xref="GeneID:8157037"
CDS complement(193512..194171)
/locus_tag="ECBD_0185"
/inference="protein motif:PFAM:PF00691"
/note="PFAM: OmpA/MotB domain protein; 17 kDa surface
antigen"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein"
/protein_id="YP_003034446.1"
/db_xref="GI:253771615"
/db_xref="InterPro:IPR001035"
/db_xref="InterPro:IPR006664"
/db_xref="InterPro:IPR006665"
/db_xref="InterPro:IPR006690"
/db_xref="InterPro:IPR008816"
/db_xref="GeneID:8157037"
/translation="MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSL
VGAGIGALSSSKKDRGKGALIGVAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRS
GDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDL
NMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP
L"
misc_feature complement(193515..194171)
/locus_tag="ECBD_0185"
/note="putative outer membrane lipoprotein; Provisional;
Region: PRK10510"
/db_xref="CDD:182507"
sig_peptide complement(194109..194171)
/locus_tag="ECBD_0185"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.997) with cleavage site probability 0.790 at
residue 21"
misc_feature complement(193524..193835)
/locus_tag="ECBD_0185"
/note="Peptidoglycan binding domains similar to the
C-terminal domain of outer-membrane protein OmpA; Region:
OmpA_C-like; cd07185"
/db_xref="CDD:143586"
misc_feature complement(order(193542..193544,193554..193556,
193680..193682,193689..193694,193704..193706,
193713..193718,193815..193820))
/locus_tag="ECBD_0185"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:143586"
gene 194324..196657
/locus_tag="ECBD_0186"
/db_xref="GeneID:8157038"
CDS 194324..196657
/locus_tag="ECBD_0186"
/EC_number="1.7.2.3"
/inference="protein motif:TFAM:TIGR00509"
/note="KEGG: sbc:SbBS512_E3976 biotin sulfoxide reductase;
TIGRFAM: molybdopterin guanine dinucleotide-containing
S/N-oxide reductase;
PFAM: molybdopterin oxidoreductase; molydopterin
dinucleotide-binding region"
/codon_start=1
/transl_table=11
/product="molybdopterin guanine dinucleotide-containing
S/N-oxide reductase"
/protein_id="YP_003034447.1"
/db_xref="GI:253771616"
/db_xref="InterPro:IPR006655"
/db_xref="InterPro:IPR006656"
/db_xref="InterPro:IPR006657"
/db_xref="InterPro:IPR006658"
/db_xref="GeneID:8157038"
/translation="MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQ
SAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHRQHKRIR
EVYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVV
GGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKL
ICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLARCTTGYA
VFASYLLGESDGIAKTAEWAAEICGVGAAKIRELAAIFHQNTTMLMAGWGMQRQQFGE
QKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSSMQGSLPGGCDAVDQ
IPVARIVEALENPGGAYQHNGMNRRFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPEL
VVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRYEARNDF
DIFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQL
IEMPENPDSARFIRFADFCRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLVP
DEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQARGIQD
GDTVRLWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTKDL
PSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS"
misc_feature 194354..196204
/locus_tag="ECBD_0186"
/note="The MopB_DMSOR-BSOR-TMAOR CD contains
dimethylsulfoxide reductase (DMSOR), biotin sulfoxide
reductase (BSOR), trimethylamine N-oxide reductase
(TMAOR) and other related proteins. DMSOR always catalyzes
the reduction of DMSO to dimethylsulfide, but its...;
Region: MopB_DMSOR-BSOR-TMAOR; cd02769"
/db_xref="CDD:239170"
misc_feature 194360..196648
/locus_tag="ECBD_0186"
/note="molybdopterin guanine dinucleotide-containing
S/N-oxide reductases; Region: bisC_fam; TIGR00509"
/db_xref="CDD:233001"
misc_feature order(194666..194680,194765..194767,194879..194881,
194894..194899,194984..194992,195050..195055,
195059..195061,195296..195301,195308..195310,
195605..195607,195611..195613,195623..195625,
195629..195631,195683..195688,195698..195700,
195752..195754,195842..195844)
/locus_tag="ECBD_0186"
/note="molybdopterin cofactor binding site [chemical
binding]; other site"
/db_xref="CDD:239170"
misc_feature order(194666..194668,194672..194674,194765..194767)
/locus_tag="ECBD_0186"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:239170"
misc_feature 196226..196603
/locus_tag="ECBD_0186"
/note="The MopB_DMSOR-BSOR-TMAOR CD contains
dimethylsulfoxide reductase (DMSOR), biotin sulfoxide
reductase (BSOR), trimethylamine N-oxide reductase
(TMAOR) and other related proteins. DMSOR always catalyzes
the reduction of DMSO to dimethylsulfide, but its...;
Region: MopB_CT_DMSOR-BSOR-TMAOR; cd02793"
/db_xref="CDD:239194"
misc_feature order(196241..196243,196247..196252,196259..196261,
196265..196273,196463..196465,196523..196525,
196574..196579)
/locus_tag="ECBD_0186"
/note="molybdopterin cofactor binding site; other site"
/db_xref="CDD:239194"
gene complement(196626..197066)
/locus_tag="ECBD_0187"
/db_xref="GeneID:8157039"
CDS complement(196626..197066)
/locus_tag="ECBD_0187"
/inference="protein motif:PFAM:PF00583"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: sbc:SbBS512_E3975 acetyltransferase, GNAT family"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034448.1"
/db_xref="GI:253771617"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:8157039"
/translation="MIREAQRSELPAILELWLESTTWGHPFIKANYWRECIPLVRDAY
LANAQNWVWEEDSKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHLML
EVYQKNQPAIDFYQAQGFHIVDCAWQDETQLPTWIMSWPVVQTL"
misc_feature complement(196707..197033)
/locus_tag="ECBD_0187"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_10; pfam13673"
/db_xref="CDD:222309"
misc_feature complement(196779..196916)
/locus_tag="ECBD_0187"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature complement(order(196806..196811,196839..196847))
/locus_tag="ECBD_0187"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(197063..197626)
/locus_tag="ECBD_0188"
/db_xref="GeneID:8157040"
CDS complement(197063..197626)
/locus_tag="ECBD_0188"
/EC_number="3.2.2.20"
/inference="protein motif:TFAM:TIGR00624"
/note="constitutive, catalyzes the hydrolysis of alkylated
DNA, releasing 3-methyladenine"
/codon_start=1
/transl_table=11
/product="3-methyl-adenine DNA glycosylase I"
/protein_id="YP_003034449.1"
/db_xref="GI:253771618"
/db_xref="InterPro:IPR004597"
/db_xref="InterPro:IPR005019"
/db_xref="GeneID:8157040"
/translation="MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGL
SWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAY
LQMEQNGEPFADFVWSFVNHQPQMTQATTLSEIPTSTPASDALSKALKKRGFKFVGTT
ICYSFMQACGLVNDHVVGCCCYPGNKP"
misc_feature complement(197066..197626)
/locus_tag="ECBD_0188"
/note="3-methyl-adenine DNA glycosylase I; Provisional;
Region: PRK10353"
/db_xref="CDD:182401"
gene 197784..198482
/locus_tag="ECBD_0189"
/db_xref="GeneID:8157041"
CDS 197784..198482
/locus_tag="ECBD_0189"
/inference="similar to AA sequence:KEGG:SbBS512_E3978"
/note="KEGG: sbc:SbBS512_E3978 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034450.1"
/db_xref="GI:253771619"
/db_xref="InterPro:IPR005546"
/db_xref="GeneID:8157041"
/translation="MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGHS
TERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQ
VTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQI
SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALSQAENTTN
NSDYLYTMGVSARF"
misc_feature 197784..198479
/locus_tag="ECBD_0189"
/note="Autotransporter protein or domain, integral
membrane beta-barrel involved in protein secretion [Cell
motility and secretion]; Region: COG5571"
/db_xref="CDD:227858"
sig_peptide 197784..197876
/locus_tag="ECBD_0189"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.958 at
residue 31"
gene 198711..199919
/locus_tag="ECBD_0190"
/db_xref="GeneID:8157042"
CDS 198711..199919
/locus_tag="ECBD_0190"
/inference="protein motif:TFAM:TIGR00890"
/note="TIGRFAM: Oxalate/formate antiporter;
PFAM: major facilitator superfamily MFS_1;
KEGG: ssn:SSON_3843 resistance protein"
/codon_start=1
/transl_table=11
/product="Oxalate/formate antiporter"
/protein_id="YP_003034451.1"
/db_xref="GI:253771620"
/db_xref="InterPro:IPR004741"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8157042"
/translation="MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAP
VSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTIASGILLGLGFFLTAHSDNLMML
WLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLE
TVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWM
LAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDK
IARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFG
LNNLAKNYGVIYLGFGIGSICGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQ
KMLREAHGSL"
sig_peptide 198711..198788
/locus_tag="ECBD_0190"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.621) with cleavage site probability 0.549 at
residue 26"
misc_feature 198735..199832
/locus_tag="ECBD_0190"
/note="oxalate/formate antiporter family transporter;
Region: 2A0111; TIGR00890"
/db_xref="CDD:233171"
misc_feature 198912..199751
/locus_tag="ECBD_0190"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(199047..199052,199059..199064,199071..199076,
199083..199085,199119..199124,199131..199136,
199152..199154,199383..199385,199392..199397,
199404..199409,199416..199418,199464..199466,
199476..199478,199488..199490,199497..199499,
199509..199511,199653..199655,199662..199667,
199674..199676,199686..199691,199698..199700,
199731..199736,199743..199748)
/locus_tag="ECBD_0190"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 200243..201934
/locus_tag="ECBD_0191"
/db_xref="GeneID:8157043"
CDS 200243..201934
/locus_tag="ECBD_0191"
/inference="protein motif:PFAM:PF00884"
/note="catalyzes the addition of a phosphoethanolamine
group to the outer Kdo residue of lipopolysaccharide"
/codon_start=1
/transl_table=11
/product="phosphoethanolamine transferase"
/protein_id="YP_003034452.1"
/db_xref="GI:253771621"
/db_xref="InterPro:IPR000917"
/db_xref="GeneID:8157043"
/translation="MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWK
GISAVVELAATVLVTFFLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYG
IIASVMTTDIDLSKEVVGLNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRS
LAVVVLAGIMVWAPIRLLDIQQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAW
ARVDESSDNNSLLNPAKKFTYQAPQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKL
AQEKNLAAFRGYSCDTATKLSLRCMFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDL
YAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLI
ILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVID
QVRDKKAIVFYAADHGESINEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQ
AFAQLKKEADMKVPRRHVELYDTIMGCLGYTSPDGGINENNNWCHIPQAKEAAAN"
misc_feature 200243..201916
/locus_tag="ECBD_0191"
/note="phosphoethanolamine transferase; Provisional;
Region: PRK11560"
/db_xref="CDD:183198"
misc_feature 200465..>200761
/locus_tag="ECBD_0191"
/note="Domain of unknown function (DUF1705); Region:
DUF1705; pfam08019"
/db_xref="CDD:149223"
misc_feature 200990..201868
/locus_tag="ECBD_0191"
/note="Sulfatase; Region: Sulfatase; pfam00884"
/db_xref="CDD:216172"
gene 202026..202102
/locus_tag="ECBD_R0002"
/note="tRNA-Pro1"
/db_xref="GeneID:8157044"
tRNA 202026..202102
/locus_tag="ECBD_R0002"
/product="tRNA-Pro"
/db_xref="GeneID:8157044"
gene 203013..204620
/locus_tag="ECBD_0192"
/db_xref="GeneID:8157045"
CDS 203013..204620
/locus_tag="ECBD_0192"
/inference="protein motif:PFAM:PF00496"
/note="PFAM: extracellular solute-binding protein family
5;
KEGG: sfv:SFV_3543 dipeptide transporter"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 5"
/protein_id="YP_003034453.1"
/db_xref="GI:253771622"
/db_xref="InterPro:IPR000914"
/db_xref="GeneID:8157045"
/translation="MRISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNP
QLFTSGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWH
DNKEFKPTRELNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDD
NTVQFVLTRPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQY
QKDSRIRYKAFDGYWGTKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARM
KQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSA
KNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFSIDLWAMPVQRPYNPNARRM
AEMIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSC
AASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTV
FEPVRKEVKGYVVDPLGKHHFENVSIE"
sig_peptide 203013..203099
/locus_tag="ECBD_0192"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.997 at
residue 29"
misc_feature 203067..204617
/locus_tag="ECBD_0192"
/note="ABC-type dipeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
DdpA; COG0747"
/db_xref="CDD:223818"
misc_feature 203100..204569
/locus_tag="ECBD_0192"
/note="The substrate-binding component of an ABC-type
dipeptide import system contains the type 2 periplasmic
binding fold; Region: PBP2_DppA_like; cd08493"
/db_xref="CDD:173858"
misc_feature order(204252..204254,204264..204266,204303..204314,
204318..204320)
/locus_tag="ECBD_0192"
/note="peptide binding site [polypeptide binding]; other
site"
/db_xref="CDD:173858"
gene 204928..205947
/locus_tag="ECBD_0193"
/db_xref="GeneID:8157046"
CDS 204928..205947
/locus_tag="ECBD_0193"
/inference="protein motif:PFAM:PF00528"
/note="transports peptides consisting of two or three
amino acids"
/codon_start=1
/transl_table=11
/product="dipeptide transporter permease DppB"
/protein_id="YP_003034454.1"
/db_xref="GI:253771623"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8157046"
/translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI
SPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL
GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW
NLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA
VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA
GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR
IRHKK"
misc_feature 204928..205944
/locus_tag="ECBD_0193"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppB; COG0601"
/db_xref="CDD:223674"
misc_feature 205213..205905
/locus_tag="ECBD_0193"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(205261..205266,205273..205278,205291..205293,
205324..205335,205339..205368,205375..205380,
205384..205386,205570..205575,205579..205581,
205585..205587,205594..205599,205603..205605,
205615..205620,205627..205629,205678..205680,
205720..205725,205732..205734,205753..205764,
205771..205776,205801..205806,205855..205860,
205867..205872,205876..205881,205888..205893,
205900..205905)
/locus_tag="ECBD_0193"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(205342..205386,205753..205770)
/locus_tag="ECBD_0193"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(205384..205386,205555..205557,205771..205773,
205795..205797,205804..205806,205855..205857)
/locus_tag="ECBD_0193"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(205630..205668,205684..205689,205699..205701)
/locus_tag="ECBD_0193"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 205957..206859
/locus_tag="ECBD_0194"
/db_xref="GeneID:8157047"
CDS 205957..206859
/locus_tag="ECBD_0194"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transporters inner
membrane component"
/codon_start=1
/transl_table=11
/product="dipeptide transporter"
/protein_id="YP_003034455.1"
/db_xref="GI:253771624"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8157047"
/translation="MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLF
IAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSL
LVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPS
IGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAP
LIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAI
LLTVLAFNLMGDGLRDALDPKLKQ"
misc_feature 205957..206856
/locus_tag="ECBD_0194"
/note="dipeptide transporter; Provisional; Region:
PRK10913"
/db_xref="CDD:182833"
misc_feature 205999..206160
/locus_tag="ECBD_0194"
/note="N-terminal TM domain of oligopeptide transport
permease C; Region: OppC_N; pfam12911"
/db_xref="CDD:221848"
misc_feature 206296..206796
/locus_tag="ECBD_0194"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(206296..206301,206308..206313,206326..206328,
206356..206367,206371..206400,206407..206412,
206416..206418,206467..206472,206476..206478,
206482..206484,206491..206496,206500..206502,
206512..206517,206524..206526,206575..206577,
206617..206622,206629..206631,206650..206661,
206668..206673,206713..206718,206752..206757,
206764..206769,206773..206778,206785..206790)
/locus_tag="ECBD_0194"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(206374..206418,206650..206667)
/locus_tag="ECBD_0194"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(206416..206418,206452..206454,206668..206670,
206707..206709,206716..206718,206752..206754)
/locus_tag="ECBD_0194"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(206527..206565,206581..206586,206596..206598)
/locus_tag="ECBD_0194"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 206870..207853
/gene="dppD"
/locus_tag="ECBD_0195"
/db_xref="GeneID:8157048"
CDS 206870..207853
/gene="dppD"
/locus_tag="ECBD_0195"
/inference="protein motif:TFAM:TIGR01727"
/note="DppD and DppF are the ATP-binding components of the
ABC dipeptide transporter DppABCDF"
/codon_start=1
/transl_table=11
/product="dipeptide transporter ATP-binding subunit"
/protein_id="YP_003034456.1"
/db_xref="GI:253771625"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR010066"
/db_xref="InterPro:IPR013563"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8157048"
/translation="MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGS
GKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSL
NPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVA
EAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPG
KYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL"
misc_feature 206870..207850
/gene="dppD"
/locus_tag="ECBD_0195"
/note="dipeptide transporter ATP-binding subunit;
Provisional; Region: dppD; PRK11022"
/db_xref="CDD:182906"
misc_feature 206876..207577
/gene="dppD"
/locus_tag="ECBD_0195"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature 206987..207010
/gene="dppD"
/locus_tag="ECBD_0195"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(206996..207001,207005..207013,207155..207157,
207401..207406,207503..207505)
/gene="dppD"
/locus_tag="ECBD_0195"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 207146..207157
/gene="dppD"
/locus_tag="ECBD_0195"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 207329..207358
/gene="dppD"
/locus_tag="ECBD_0195"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 207389..207406
/gene="dppD"
/locus_tag="ECBD_0195"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 207413..207424
/gene="dppD"
/locus_tag="ECBD_0195"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 207491..207511
/gene="dppD"
/locus_tag="ECBD_0195"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
misc_feature 207560..207820
/gene="dppD"
/locus_tag="ECBD_0195"
/note="oligopeptide/dipeptide ABC transporter, ATP-binding
protein, C-terminal domain; Region: oligo_HPY; TIGR01727"
/db_xref="CDD:213647"
gene 207850..208854
/gene="dppF"
/locus_tag="ECBD_0196"
/db_xref="GeneID:8157049"
CDS 207850..208854
/gene="dppF"
/locus_tag="ECBD_0196"
/inference="protein motif:TFAM:TIGR01727"
/note="Part of the ABC transporter complex DppABCDF
involved in the transport of dipeptides"
/codon_start=1
/transl_table=11
/product="dipeptide transporter ATP-binding subunit"
/protein_id="YP_003034457.1"
/db_xref="GI:253771626"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR010066"
/db_xref="InterPro:IPR013563"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8157049"
/translation="MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFN
LERGKTLAVVGESGCGKSTLGRLLTMIEMPTGGELYYQGQDLLKHDPQAQKLRRQKIQ
IVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPH
MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFI
SHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRER
IKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR
"
misc_feature 207874..208851
/gene="dppF"
/locus_tag="ECBD_0196"
/note="dipeptide transporter ATP-binding subunit;
Provisional; Region: dppF; PRK11308"
/db_xref="CDD:236898"
misc_feature 207883..208581
/gene="dppF"
/locus_tag="ECBD_0196"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature 208012..208035
/gene="dppF"
/locus_tag="ECBD_0196"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(208021..208026,208030..208038,208165..208167,
208405..208410,208507..208509)
/gene="dppF"
/locus_tag="ECBD_0196"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 208156..208167
/gene="dppF"
/locus_tag="ECBD_0196"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 208333..208362
/gene="dppF"
/locus_tag="ECBD_0196"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 208393..208410
/gene="dppF"
/locus_tag="ECBD_0196"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 208417..208428
/gene="dppF"
/locus_tag="ECBD_0196"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 208495..208515
/gene="dppF"
/locus_tag="ECBD_0196"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
misc_feature 208570..208824
/gene="dppF"
/locus_tag="ECBD_0196"
/note="oligopeptide/dipeptide ABC transporter, ATP-binding
protein, C-terminal domain; Region: oligo_HPY; TIGR01727"
/db_xref="CDD:213647"
gene complement(208884..210155)
/locus_tag="ECBD_0197"
/db_xref="GeneID:8157050"
CDS complement(208884..210155)
/locus_tag="ECBD_0197"
/inference="protein motif:TFAM:TIGR00814"
/note="TIGRFAM: serine transporter;
KEGG: ssn:SSON_3851 transporter protein"
/codon_start=1
/transl_table=11
/product="serine transporter"
/protein_id="YP_003034458.1"
/db_xref="GI:253771627"
/db_xref="InterPro:IPR001220"
/db_xref="InterPro:IPR004694"
/db_xref="GeneID:8157050"
/translation="MQHNTLSKHNQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGL
KGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYF
LMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLF
KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQ
VLNPMNIAYRKREADKVLATRLALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAF
EQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRII
DTKKINSRVLTLAICAFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKV
AQLEKLRGFKAWLILLYGILLCLSPLLKLIE"
misc_feature complement(208956..210125)
/locus_tag="ECBD_0197"
/note="Amino acid permeases [Amino acid transport and
metabolism]; Region: SdaC; COG0814"
/db_xref="CDD:223884"
misc_feature complement(208950..210113)
/locus_tag="ECBD_0197"
/note="serine transporter; Region: stp; TIGR00814"
/db_xref="CDD:233139"
gene 210631..210738
/locus_tag="ECBD_0198"
/db_xref="GeneID:8157051"
CDS 210631..210738
/locus_tag="ECBD_0198"
/inference="similar to AA sequence:KEGG:SbBS512_E3995"
/note="KEGG: sbc:SbBS512_E3995 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034459.1"
/db_xref="GI:253771628"
/db_xref="GeneID:8157051"
/translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
misc_feature 210631..210735
/locus_tag="ECBD_0198"
/note="Toxin Ldr, type I toxin-antitoxin system; Region:
Ldr_toxin; pfam13940"
/db_xref="CDD:206111"
gene 211114..211221
/locus_tag="ECBD_0199"
/db_xref="GeneID:8157052"
CDS 211114..211221
/locus_tag="ECBD_0199"
/inference="similar to AA sequence:KEGG:SbBS512_E3995"
/note="KEGG: sbc:SbBS512_E3995 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034460.1"
/db_xref="GI:253771629"
/db_xref="GeneID:8157052"
/translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
misc_feature 211114..211218
/locus_tag="ECBD_0199"
/note="Toxin Ldr, type I toxin-antitoxin system; Region:
Ldr_toxin; pfam13940"
/db_xref="CDD:206111"
gene 211597..211704
/locus_tag="ECBD_0200"
/db_xref="GeneID:8157053"
CDS 211597..211704
/locus_tag="ECBD_0200"
/inference="similar to AA sequence:KEGG:SF3573"
/note="KEGG: sfl:SF3573 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034461.1"
/db_xref="GI:253771630"
/db_xref="GeneID:8157053"
/translation="MTFAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
misc_feature 211597..211701
/locus_tag="ECBD_0200"
/note="Toxin Ldr, type I toxin-antitoxin system; Region:
Ldr_toxin; pfam13940"
/db_xref="CDD:206111"
gene complement(211791..213470)
/locus_tag="ECBD_0201"
/db_xref="GeneID:8157054"
CDS complement(211791..213470)
/locus_tag="ECBD_0201"
/inference="protein motif:TFAM:TIGR03368"
/note="TIGRFAM: cellulose synthase operon protein YhjU;
KEGG: sfv:SFV_3549 hypothetical protein"
/codon_start=1
/transl_table=11
/product="cellulose synthase operon protein YhjU"
/protein_id="YP_003034462.1"
/db_xref="GI:253771631"
/db_xref="InterPro:IPR017744"
/db_xref="GeneID:8157054"
/translation="MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHP
LLNLVFAAFLLMPLPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFS
TDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFS
LWPAGQPTTTVTTTGGNAAATVAATGGAPVVGDMPAQTAPPTTANLNAWLNNFYNAEA
KRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATS
YSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLK
EVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNT
LPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGD
RMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQPSSFLAISDLVVRVLDGK
IFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ"
misc_feature complement(211809..213404)
/locus_tag="ECBD_0201"
/note="Protein of unknown function (DUF3260); Region:
DUF3260; pfam11658"
/db_xref="CDD:221160"
gene complement(213467..213658)
/locus_tag="ECBD_0202"
/db_xref="GeneID:8157055"
CDS complement(213467..213658)
/locus_tag="ECBD_0202"
/inference="similar to AA sequence:KEGG:SbBS512_E3999"
/note="KEGG: sbc:SbBS512_E3999 cellulose biosynthesis
protein BcsF"
/codon_start=1
/transl_table=11
/product="cellulose biosynthesis protein BcsF"
/protein_id="YP_003034463.1"
/db_xref="GI:253771632"
/db_xref="GeneID:8157055"
/translation="MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPR
YVKPAGTLRRTEKARATKK"
misc_feature complement(213470..213655)
/locus_tag="ECBD_0202"
/note="celllulose biosynthesis operon protein BcsF/YhjT;
Region: cellullose_BcsF; TIGR03493"
/db_xref="CDD:200277"
gene complement(213655..215214)
/locus_tag="ECBD_0203"
/db_xref="GeneID:8157056"
CDS complement(213655..215214)
/locus_tag="ECBD_0203"
/inference="protein motif:TFAM:TIGR03369"
/note="TIGRFAM: cellulose biosynthesis protein BcsE;
KEGG: sfx:S4199 protease"
/codon_start=1
/transl_table=11
/product="cellulose biosynthesis protein BcsE"
/protein_id="YP_003034464.1"
/db_xref="GI:253771633"
/db_xref="InterPro:IPR017745"
/db_xref="GeneID:8157056"
/translation="MDPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIA
SQAETAHVAVISMDSDPAKIFQLDDSQGPEKIKLFSMLNHEKGLYYLTRDLQCSIDPH
NYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLNHCSLLVINPGNNNDKQFSLLLEE
YRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPR
SDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLA
RSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESV
QGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVAL
RPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDI
FSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPM
RLLDDAVERSS"
misc_feature complement(213658..215214)
/locus_tag="ECBD_0203"
/note="cellulose biosynthesis protein BcsE; Provisional;
Region: PRK15045"
/db_xref="CDD:185005"
misc_feature complement(213805..214743)
/locus_tag="ECBD_0203"
/note="Protein of unknown function (DUF2819); Region:
DUF2819; pfam10995"
/db_xref="CDD:220931"
gene 215499..215687
/locus_tag="ECBD_0204"
/db_xref="GeneID:8157057"
CDS 215499..215687
/locus_tag="ECBD_0204"
/inference="similar to AA sequence:KEGG:SFV_3553"
/note="KEGG: sfv:SFV_3553 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034465.1"
/db_xref="GI:253771634"
/db_xref="GeneID:8157057"
/translation="MNNNEPDTLPDPAIGYIFQNDIVALKQAFSLPDIDYADISQREQ
LAAALKRWPLLAEFAQQK"
misc_feature 215547..215678
/locus_tag="ECBD_0204"
/note="Protein of unknown function (DUF2629); Region:
DUF2629; pfam10945"
/db_xref="CDD:151392"
gene 215699..216451
/locus_tag="ECBD_0205"
/db_xref="GeneID:8157058"
CDS 215699..216451
/locus_tag="ECBD_0205"
/inference="protein motif:TFAM:TIGR03371"
/note="TIGRFAM: cellulose synthase operon protein YhjQ;
PFAM: YhjQ family protein;
KEGG: sbc:SbBS512_E3940 YhjQ protein"
/codon_start=1
/transl_table=11
/product="cell division protein"
/protein_id="YP_003034466.1"
/db_xref="GI:253771635"
/db_xref="InterPro:IPR009504"
/db_xref="InterPro:IPR017746"
/db_xref="GeneID:8157058"
/translation="MAVLGLQGGRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLL
RLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRL
SDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQ
ALPDGAHILINNFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEY
RSDALAAEEILTLANWCLLNYSGLKTPVGSKS"
misc_feature 215768..216448
/locus_tag="ECBD_0205"
/note="cell division protein; Provisional; Region:
PRK10037"
/db_xref="CDD:182204"
gene 216448..219066
/gene="bcsA"
/locus_tag="ECBD_0206"
/db_xref="GeneID:8157059"
CDS 216448..219066
/gene="bcsA"
/locus_tag="ECBD_0206"
/inference="protein motif:TFAM:TIGR03030"
/note="polymerizes uridine 5'-diphosphate glucose to
cellulose; acts with BcsB, BcsZ and BcsC in cellulose
biosynthesis"
/codon_start=1
/transl_table=11
/product="cellulose synthase catalytic subunit"
/protein_id="YP_003034467.1"
/db_xref="GI:253771636"
/db_xref="InterPro:IPR001173"
/db_xref="InterPro:IPR003919"
/db_xref="InterPro:IPR009875"
/db_xref="InterPro:IPR017480"
/db_xref="GeneID:8157059"
/translation="MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILA
WIFIPLEHPRWQRIRAEHKNLYPHINASRPRPLDPVRYLIQTCWLLIGASRKETPKPR
RRAFSGLQNIRGRYHQWMNELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSL
ILALICVTQPFNPLAQFIFLMLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRY
TSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVD
IFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQNVGVKYIART
THEHAKAGNINNALKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHF
FSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIA
VETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLD
NPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFV
LPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGG
LVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYGPPTEMLTVVVSMVWVFYNLIVL
GGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQIL
EGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQQHIDFVQCTFARADTWAL
WQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRVLTSLVSWVVSFIPRRP
ERSETAQPSDQALAQQ"
misc_feature 216490..219042
/gene="bcsA"
/locus_tag="ECBD_0206"
/note="cellulose synthase catalytic subunit; Provisional;
Region: bcsA; PRK11498"
/db_xref="CDD:236918"
misc_feature 216997..>217479
/gene="bcsA"
/locus_tag="ECBD_0206"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:245596"
misc_feature 217264..217962
/gene="bcsA"
/locus_tag="ECBD_0206"
/note="CESA_CelA_like are involved in the elongation of
the glucan chain of cellulose; Region: CESA_CelA_like;
cd06421"
/db_xref="CDD:133043"
misc_feature 217525..217533
/gene="bcsA"
/locus_tag="ECBD_0206"
/note="DXD motif; other site"
/db_xref="CDD:133043"
misc_feature 218527..218820
/gene="bcsA"
/locus_tag="ECBD_0206"
/note="PilZ domain; Region: PilZ; pfam07238"
/db_xref="CDD:219344"
gene 219113..221416
/locus_tag="ECBD_0207"
/db_xref="GeneID:8157060"
CDS 219113..221416
/locus_tag="ECBD_0207"
/inference="protein motif:PFAM:PF03170"
/note="binds the cellulose synthase activator, bis-(3'-5')
cyclic diguanylic acid (c-di-GMP)"
/codon_start=1
/transl_table=11
/product="cellulose synthase regulator protein"
/protein_id="YP_003034468.1"
/db_xref="GI:253771637"
/db_xref="InterPro:IPR003920"
/db_xref="GeneID:8157060"
/translation="MGMSAFPSFMTQATPATQPLINAEPAVAAQTEQNPQVGQVMPGV
QGADAPVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGMRSDEVVTKAMLN
LEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPINPLFITDFNRVRL
EFVGHYQDVCENPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPVPFFDPRDNRTNT
LPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRNAIVFATNDKRPD
FLRDHPAVKAPVIEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGESVVV
NEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAINVSLNLPPDLYL
MRSTGIDMDINYRYTMPPVKDSSRMDISLNNQFLQSFNLSSKQEANRLLLRIPVLQGL
LDGKTDVSIPALKLGATNQLRFDFEYMNPMPGGSVDNCITFQPVQNHVVIGDDSTIDF
SKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMETLLNTVGFIGAQT
GFPAINLTVTDDGSTIQGKDADIMIIGGIPDKLKDDKQIDLLVQATESWVKTPMRQTP
FPGIVPDESDRAAETRSTLTSSGAMAAVIGFQSPYNDQRSVIALLADSPRGYEMLNDA
VNDSGKRATMFGSVAVIRESGINSLRVGDVYYVGHLPWFERLWYALANHPILLAVLAA
ISVILLAWVLWRLLRIISRRRLNPDNE"
misc_feature 219113..221308
/locus_tag="ECBD_0207"
/note="cellulose synthase regulator protein; Provisional;
Region: PRK11114"
/db_xref="CDD:236851"
gene 221423..222529
/locus_tag="ECBD_0208"
/db_xref="GeneID:8157061"
CDS 221423..222529
/locus_tag="ECBD_0208"
/EC_number="3.2.1.4"
/inference="protein motif:PRIAM:3.2.1.4"
/note="catalyzes the hydrolysis of 1,4-beta-D-glucosidic
linkages in cellulose, lichenin and cereal beta-D-glucans"
/codon_start=1
/transl_table=11
/product="endo-1,4-D-glucanase"
/protein_id="YP_003034469.1"
/db_xref="GI:253771638"
/db_xref="InterPro:IPR002037"
/db_xref="GeneID:8157061"
/translation="MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVID
PSDARKITTSEGQSYGMFFALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKE
NSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG
SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFS
PDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTE
KNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNY
VLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH"
misc_feature 221423..222526
/locus_tag="ECBD_0208"
/note="endo-1,4-D-glucanase; Provisional; Region:
PRK11097"
/db_xref="CDD:236844"
sig_peptide 221423..221488
/locus_tag="ECBD_0208"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.959 at
residue 22"
gene 222511..225984
/locus_tag="ECBD_0209"
/db_xref="GeneID:8157062"
CDS 222511..225984
/locus_tag="ECBD_0209"
/inference="protein motif:PFAM:PF05420"
/note="cellulose is produced by the multicellular
morphotypes of E. coli and Salmonella typhimurium; the
cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are
constitutively transcribed, however, cellulose synthesis
is dependent on the expression of adrA"
/codon_start=1
/transl_table=11
/product="cellulose synthase subunit BcsC"
/protein_id="YP_003034470.1"
/db_xref="GI:253771639"
/db_xref="InterPro:IPR001440"
/db_xref="InterPro:IPR008410"
/db_xref="InterPro:IPR013026"
/db_xref="InterPro:IPR013105"
/db_xref="GeneID:8157062"
/translation="MRKFTLNIFTLSLGLTVMPMVEAAPTAQQQLLEQVRLGEATHRE
DLVQQSLYRLELIDPNNPDVVAARFRSLLRQGDIDGAQKQLDRLSQLAPSSNAYKSSR
TTMLLSTPDGRQALQQARLQATTGHAEEAVASYNKLFNGAPPEGDIAVEYWSTVAKIP
ARRGEAINQLKRINADTPGNTGLQNNLALLLFSSDRRDEGFAVLEQMAKSNAGREGAS
KIWYGQIKDMPVSDASVSALKKYLSIFSDGDSVAAAQSQLAEQQKQLADPAFRARAQG
LAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQAYSQKGDRANAVANLEKALALDP
HSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLG
DVAMARKDYPAAERYYQQTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRR
SIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQA
GQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQE
LVNRLQSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARA
AYQNVLTREPANADAILGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQA
QLGDTAAAQRTFNKLIPQAKSQPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAMVA
SGVTTTRPQDNDTFTRLTRNDEKDDWLKRGVRSDAADLYRQQDLNVTLEHDYWGSSGT
GGYSDLKAHTTMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNADGKWDDNWGTCTLQDC
SGNRSQSDSGASVAVGWRNDVWSWDIGTTPMGFNVVDVVGGISYSDDIGPLGYTVNAH
RRPISSSLLAFGGQKDSPSNTGKKWGGVRADGVGLSLSYDKGEANGVWASLSGDQLTG
KNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLGQGGYYSPQEY
LSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEEAARQSNDG
GSSQGFGYTARALLERRVTSNWFVGTAIDIQQAKDYAPSHFLLYVRYSAAGWQGDMDL
PPQPLIPYADW"
misc_feature 222511..225981
/locus_tag="ECBD_0209"
/note="cellulose synthase subunit BcsC; Provisional;
Region: PRK11447"
/db_xref="CDD:183140"
sig_peptide 222511..222582
/locus_tag="ECBD_0209"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.997 at
residue 24"
misc_feature 223420..223758
/locus_tag="ECBD_0209"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:238112"
misc_feature order(223420..223425,223429..223434,223441..223446,
223567..223572,223582..223587,223594..223599,
223675..223680,223687..223692,223699..223704)
/locus_tag="ECBD_0209"
/note="binding surface"
/db_xref="CDD:238112"
misc_feature order(223438..223440,223474..223476,223486..223488,
223495..223497,223582..223584,223618..223620,
223630..223632,223639..223641,223684..223686,
223720..223722,223732..223734,223741..223743)
/locus_tag="ECBD_0209"
/note="TPR motif; other site"
/db_xref="CDD:238112"
misc_feature 223666..223941
/locus_tag="ECBD_0209"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:238112"
misc_feature order(223666..223671,223675..223680,223687..223692,
223777..223782,223786..223791,223798..223803,
223903..223908,223915..223920,223927..223932)
/locus_tag="ECBD_0209"
/note="binding surface"
/db_xref="CDD:238112"
misc_feature order(223684..223686,223720..223722,223732..223734,
223741..223743,223786..223788,223819..223821,
223873..223875,223882..223884,223912..223914)
/locus_tag="ECBD_0209"
/note="TPR motif; other site"
/db_xref="CDD:238112"
misc_feature 224911..225930
/locus_tag="ECBD_0209"
/note="Cellulose synthase operon protein C C-terminus
(BCSC_C); Region: BCSC_C; pfam05420"
/db_xref="CDD:218583"
gene 226105..228054
/locus_tag="ECBD_0210"
/db_xref="GeneID:8157063"
CDS 226105..228054
/locus_tag="ECBD_0210"
/inference="protein motif:TFAM:TIGR00254"
/note="HmsP in Yersinia pestis plays a role in invasion of
epithelial cells; the EAL-domain portion of HmsP from Y.
pestis shows phosphodiesterase activity which is required
for the inhibition of biofilm formation; inner membrane
protein; similar to a phosphodiesterase protein from E.
coli"
/codon_start=1
/transl_table=11
/product="phosphodiesterase"
/protein_id="YP_003034471.1"
/db_xref="GI:253771640"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR001633"
/db_xref="InterPro:IPR003660"
/db_xref="GeneID:8157063"
/translation="MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPL
SSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFE
LPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVA
ISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL
QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKE
AQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE
RLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA
AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLI
DRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELL
TRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM
KSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV
GIAQGFLFARPLPIEIFEESYLEEK"
misc_feature 226138..228051
/locus_tag="ECBD_0210"
/note="putative diguanylate cyclase; Provisional; Region:
PRK13561"
/db_xref="CDD:184143"
misc_feature 226801..227253
/locus_tag="ECBD_0210"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature order(226891..226893,227020..227022)
/locus_tag="ECBD_0210"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(226906..226911,227008..227010,227014..227025)
/locus_tag="ECBD_0210"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(226996..226998,227083..227085)
/locus_tag="ECBD_0210"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature 227305..228021
/locus_tag="ECBD_0210"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:238923"
gene 228237..229523
/locus_tag="ECBD_0211"
/db_xref="GeneID:8157064"
CDS 228237..229523
/locus_tag="ECBD_0211"
/inference="protein motif:PFAM:PF00375"
/note="involved in the transport of C4-dicarboxylates
across the membrane"
/codon_start=1
/transl_table=11
/product="C4-dicarboxylate transporter DctA"
/protein_id="YP_003034472.1"
/db_xref="GI:253771641"
/db_xref="InterPro:IPR001991"
/db_xref="GeneID:8157064"
/translation="MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKL
IKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPG
AGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLF
GFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQ
LGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRM
LDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLI
VFLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNG
VATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS"
misc_feature 228237..229517
/locus_tag="ECBD_0211"
/note="C4-dicarboxylate transporter DctA; Reviewed;
Region: PRK01663"
/db_xref="CDD:234968"
misc_feature 228240..229463
/locus_tag="ECBD_0211"
/note="Na+/H+-dicarboxylate symporters [Energy production
and conversion]; Region: GltP; COG1301"
/db_xref="CDD:224220"
gene 229744..231240
/locus_tag="ECBD_0212"
/db_xref="GeneID:8157065"
CDS 229744..231240
/locus_tag="ECBD_0212"
/inference="protein motif:PFAM:PF00675"
/note="PFAM: peptidase M16 domain protein;
KEGG: sdy:SDY_4547 hypothetical protein"
/codon_start=1
/transl_table=11
/product="peptidase M16 domain protein"
/protein_id="YP_003034473.1"
/db_xref="GI:253771642"
/db_xref="InterPro:IPR007863"
/db_xref="InterPro:IPR011765"
/db_xref="GeneID:8157065"
/translation="MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQW
QVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQ
QGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHAL
QSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAM
TLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLS
IMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRA
QCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARA
DTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILL
QPKGEPEFNMKALQAVWDQIMAPSTAAATTSVATDDVHPEVTDIPPAQ"
sig_peptide 229744..229818
/locus_tag="ECBD_0212"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.997 at
residue 25"
misc_feature 229807..231111
/locus_tag="ECBD_0212"
/note="Predicted Zn-dependent peptidases [General function
prediction only]; Region: PqqL; COG0612"
/db_xref="CDD:223685"
misc_feature 230341..230874
/locus_tag="ECBD_0212"
/note="Peptidase M16 inactive domain; Region:
Peptidase_M16_C; pfam05193"
/db_xref="CDD:218490"
gene complement(231336..232265)
/locus_tag="ECBD_0213"
/db_xref="GeneID:8157066"
CDS complement(231336..232265)
/locus_tag="ECBD_0213"
/inference="protein motif:PFAM:PF00294"
/note="PFAM: PfkB domain protein"
/codon_start=1
/transl_table=11
/product="PfkB domain protein"
/protein_id="YP_003034474.1"
/db_xref="GI:253771643"
/db_xref="InterPro:IPR002173"
/db_xref="InterPro:IPR011611"
/db_xref="GeneID:8157066"
/translation="MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPA
ALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYY
WRNEAAAKFWLESEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANG
GKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTH
NAGVKEVVVKRGADSCLVSIAGEGLVDVPAAKLPKEKVIDTTAAGDSFSAGYLAVRLT
GGSAENAAKRGHLTASTVIQYRGAIIPREAMPA"
misc_feature complement(231342..232256)
/locus_tag="ECBD_0213"
/note="Sugar kinases, ribokinase family [Carbohydrate
transport and metabolism]; Region: RbsK; COG0524"
/db_xref="CDD:223598"
misc_feature complement(231363..232256)
/locus_tag="ECBD_0213"
/note="2-keto-3-deoxygluconate kinase (KdgK)
phosphorylates 2-keto-3-deoxygluconate (KDG) to form
2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the
common intermediate product, that allows organisms to
channel D-glucuronate and/or D-galacturinate into the...;
Region: KdgK; cd01166"
/db_xref="CDD:238571"
misc_feature complement(order(231366..231368,231474..231476,
231483..231485,231756..231758,231858..231860,
231954..231956,231960..231962,232002..232004,
232170..232172,232179..232184))
/locus_tag="ECBD_0213"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238571"
misc_feature complement(order(231390..231392,231402..231404,
231468..231470,231477..231485,231510..231512,
231567..231569,231582..231584))
/locus_tag="ECBD_0213"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238571"
gene 232497..233264
/locus_tag="ECBD_0214"
/db_xref="GeneID:8157067"
CDS 232497..233264
/locus_tag="ECBD_0214"
/inference="protein motif:PFAM:PF00563"
/note="in Escherichia coli this protein is involved in
flagellar function"
/codon_start=1
/transl_table=11
/product="EAL domain-containing protein"
/protein_id="YP_003034475.1"
/db_xref="GI:253771644"
/db_xref="InterPro:IPR001633"
/db_xref="GeneID:8157067"
/translation="MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRL
MAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLA
SVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDF
GTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVE
TPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL"
misc_feature 232545..233234
/locus_tag="ECBD_0214"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:238923"
gene 233319..235394
/locus_tag="ECBD_0215"
/db_xref="GeneID:8157068"
CDS 233319..235394
/locus_tag="ECBD_0215"
/inference="protein motif:PFAM:PF05170"
/note="PFAM: AsmA family protein;
KEGG: sbo:SBO_3523 hypothetical protein"
/codon_start=1
/transl_table=11
/product="AsmA family protein"
/protein_id="YP_003034476.1"
/db_xref="GI:253771645"
/db_xref="InterPro:IPR007844"
/db_xref="GeneID:8157068"
/translation="MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTIN
QKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMV
HLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAK
PSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVG
DYVFGLKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDP
MKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFN
GRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQK
KGEKSVQPAGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNAD
LRLQPLKFGMAGGSIAANIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGEM
NGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDE
VRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRII
TLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQC
RTILSQMKK"
sig_peptide 233319..233402
/locus_tag="ECBD_0215"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.977) with cleavage site probability 0.589 at
residue 28"
misc_feature 233334..235250
/locus_tag="ECBD_0215"
/note="Uncharacterized protein involved in outer membrane
biogenesis [Cell envelope biogenesis, outer membrane];
Region: AsmA; COG2982"
/db_xref="CDD:225529"
misc_feature 234627..235238
/locus_tag="ECBD_0215"
/note="AsmA-like C-terminal region; Region: AsmA_2;
pfam13502"
/db_xref="CDD:222180"
gene complement(235576..236898)
/locus_tag="ECBD_0216"
/db_xref="GeneID:8157069"
CDS complement(235576..236898)
/locus_tag="ECBD_0216"
/inference="protein motif:TFAM:TIGR00883"
/note="TIGRFAM: metabolite/H+ symporter, major facilitator
superfamily (MFS);
PFAM: general substrate transporter; major facilitator
superfamily MFS_1;
KEGG: ssn:SSON_3868 transporter"
/codon_start=1
/transl_table=11
/product="metabolite/H+ symporter, major facilitator
superfamily (MFS)"
/protein_id="YP_003034477.1"
/db_xref="GI:253771646"
/db_xref="InterPro:IPR000911"
/db_xref="InterPro:IPR004736"
/db_xref="InterPro:IPR005828"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8157069"
/translation="MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATA
AVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLL
TMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
LYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVS
LHESPVFEKVAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFST
ATAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLIILFALF
AFNPLLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVASI
LGASVAPYIAAWLQTNYGLGAVGLYLAAMAGLTLIALLLTHETRHQSL"
misc_feature complement(235606..236829)
/locus_tag="ECBD_0216"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(235621..236811)
/locus_tag="ECBD_0216"
/note="metabolite-proton symporter; Region: 2A0106;
TIGR00883"
/db_xref="CDD:233168"
misc_feature complement(order(235714..235716,235726..235731,
235738..235743,235750..235755,235786..235788,
235795..235800,235810..235812,235819..235824,
235831..235833,235984..235986,235996..235998,
236005..236007,236017..236019,236029..236031,
236083..236085,236092..236097,236104..236109,
236116..236118,236377..236379,236395..236400,
236407..236412,236446..236448,236455..236460,
236467..236472,236479..236484,236644..236649,
236653..236658,236668..236670,236677..236682,
236689..236691,236761..236766,236770..236778,
236785..236787))
/locus_tag="ECBD_0216"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(237309..238322)
/locus_tag="ECBD_0217"
/db_xref="GeneID:8157070"
CDS complement(237309..238322)
/locus_tag="ECBD_0217"
/inference="protein motif:TFAM:TIGR00766"
/note="TIGRFAM: ribonuclease;
PFAM: ribonuclease BN;
KEGG: sbc:SbBS512_E3927 ribonuclease"
/codon_start=1
/transl_table=11
/product="ribonuclease"
/protein_id="YP_003034478.1"
/db_xref="GI:253771647"
/db_xref="InterPro:IPR004664"
/db_xref="InterPro:IPR005274"
/db_xref="GeneID:8157070"
/translation="MTQENEIKRPIQDLEHEPIKPLDNSEKGSKVSQALETVTTTAEK
VQRQPVIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPML
LQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAI
RAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH
LNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVI
KIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGK
TQP"
misc_feature complement(237345..238169)
/locus_tag="ECBD_0217"
/note="inner membrane protein YhjD; Region: TIGR00766"
/db_xref="CDD:188082"
gene complement(238371..239342)
/locus_tag="ECBD_0218"
/db_xref="GeneID:8157071"
CDS complement(238371..239342)
/locus_tag="ECBD_0218"
/inference="protein motif:PFAM:PF03466"
/note="PFAM: LysR substrate-binding; regulatory protein
LysR;
KEGG: sbo:SBO_3520 transcriptional regulator LysR-type"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_003034479.1"
/db_xref="GI:253771648"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:8157071"
/translation="MLEKTINNAICALLFRCEQQSVKEMDKIHAMQLFIKVAELESFS
RAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLSE
LDGLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPGIELELSSHDRPVDILH
DGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTP
HLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLTAGLAGLGIIQIPRIAVREALRA
GRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEHLD"
misc_feature complement(238374..239261)
/locus_tag="ECBD_0218"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:223656"
misc_feature complement(239085..239261)
/locus_tag="ECBD_0218"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:215735"
misc_feature complement(238392..238997)
/locus_tag="ECBD_0218"
/note="The C-terminal substrate binding domain of an
uncharacterized LysR-type transcriptional regulator
CrgA-like, contains the type 2 periplasmic binding fold;
Region: PBP2_CrgA_like_3; cd08472"
/db_xref="CDD:176161"
misc_feature complement(order(238464..238466,238545..238547,
238596..238598,238788..238790,238794..238796,
238836..238838,238953..238955,238965..238967))
/locus_tag="ECBD_0218"
/note="putative effector binding pocket; other site"
/db_xref="CDD:176161"
misc_feature complement(order(238569..238571,238578..238583,
238602..238616,238707..238709,238890..238910,
238914..238916,238926..238928,238935..238940,
238944..238949,238959..238964))
/locus_tag="ECBD_0218"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176161"
gene 239790..240392
/locus_tag="ECBD_0219"
/db_xref="GeneID:8157072"
CDS 239790..240392
/locus_tag="ECBD_0219"
/inference="protein motif:PFAM:PF00196"
/note="PFAM: regulatory protein LuxR; Sigma-70 region 4
type 2;
SMART: regulatory protein LuxR;
KEGG: sbc:SbBS512_E3925 transcriptional regulator, LuxR
family"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_003034480.1"
/db_xref="GI:253771649"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR013249"
/db_xref="GeneID:8157072"
/translation="MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES
YPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVP
RDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNK
EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS"
misc_feature 239790..240377
/locus_tag="ECBD_0219"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:225107"
misc_feature 240213..240383
/locus_tag="ECBD_0219"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(240216..240224,240261..240269,240291..240296,
240300..240305,240309..240323,240354..240356)
/locus_tag="ECBD_0219"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(240249..240251,240255..240257,240261..240263,
240354..240362,240369..240371,240378..240383)
/locus_tag="ECBD_0219"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(240443..242092)
/gene="treF"
/locus_tag="ECBD_0220"
/db_xref="GeneID:8157073"
CDS complement(240443..242092)
/gene="treF"
/locus_tag="ECBD_0220"
/EC_number="3.2.1.28"
/inference="protein motif:PRIAM:3.2.1.28"
/note="cytoplasmic; catalyzes the hydrolysis of trehalose
to glucose"
/codon_start=1
/transl_table=11
/product="trehalase"
/protein_id="YP_003034481.1"
/db_xref="GI:253771650"
/db_xref="InterPro:IPR001661"
/db_xref="GeneID:8157073"
/translation="MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMI
EGLPASDALTPADRYLELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRD
FDLRKFVENHFWLPEVYSSEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQ
SYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYY
LSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMP
DGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRD
TGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRDAVNRY
LWDDENGIYRDYDWRREQLALFSAAAIVPLYVGMANHEQADRLANAVRSRLLTPGGIL
ASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYLEQHKMI
EKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP"
misc_feature complement(240446..242092)
/gene="treF"
/locus_tag="ECBD_0220"
/note="trehalase; Provisional; Region: treF; PRK13270"
/db_xref="CDD:183934"
misc_feature complement(240452..241885)
/gene="treF"
/locus_tag="ECBD_0220"
/note="Trehalase; Region: Trehalase; pfam01204"
/db_xref="CDD:216362"
gene 242497..243894
/locus_tag="ECBD_0221"
/db_xref="GeneID:8157074"
CDS 242497..243894
/locus_tag="ECBD_0221"
/EC_number="1.11.1.5"
/inference="protein motif:PRIAM:1.11.1.5"
/note="PFAM: Di-haem cytochrome C peroxidase;
KEGG: sfv:SFV_3990 cytochrome C peroxidase"
/codon_start=1
/transl_table=11
/product="cytochrome-c peroxidase"
/protein_id="YP_003034482.1"
/db_xref="GI:253771651"
/db_xref="InterPro:IPR004852"
/db_xref="InterPro:IPR009056"
/db_xref="GeneID:8157074"
/translation="MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAV
SENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAAL
LADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYA
SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGV
DGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSW
DEIIAKLEKDPQLKTQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENA
LTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKE
ERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFL
HSLNGVYTPYMQDKQ"
misc_feature 242545..242961
/locus_tag="ECBD_0221"
/note="Haem-binding domain; Region: Haem_bd; pfam14376"
/db_xref="CDD:222718"
misc_feature 242869..243879
/locus_tag="ECBD_0221"
/note="Cytochrome c peroxidase [Inorganic ion transport
and metabolism]; Region: MauG; COG1858"
/db_xref="CDD:224771"
gene 244105..245505
/locus_tag="ECBD_0222"
/db_xref="GeneID:8157075"
CDS 244105..245505
/locus_tag="ECBD_0222"
/inference="protein motif:TFAM:TIGR01788"
/note="TIGRFAM: glutamate decarboxylase;
PFAM: pyridoxal-dependent decarboxylase;
KEGG: sbo:SBO_3516 glutamate decarboxylase isozyme"
/codon_start=1
/transl_table=11
/product="glutamate decarboxylase"
/protein_id="YP_003034483.1"
/db_xref="GI:253771652"
/db_xref="InterPro:IPR002129"
/db_xref="InterPro:IPR010107"
/db_xref="GeneID:8157075"
/translation="MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQ
IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVN
MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCG
PVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYE
FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK
FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL
GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTL
YDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD
HPKLQGIAQQNSFKHT"
misc_feature 244279..245436
/locus_tag="ECBD_0222"
/note="DOPA decarboxylase family. This family belongs to
pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). The major groups in
this CD correspond to DOPA/tyrosine decarboxylase (DDC),
histidine decarboxylase (HDC), and...; Region:
DOPA_deC_like; cd06450"
/db_xref="CDD:99743"
misc_feature order(244480..244485,244492..244494,244726..244728,
244831..244833,244840..244842,244921..244923,
244930..244932)
/locus_tag="ECBD_0222"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99743"
misc_feature 244930..244932
/locus_tag="ECBD_0222"
/note="catalytic residue [active]"
/db_xref="CDD:99743"
gene 245620..245790
/locus_tag="ECBD_0223"
/db_xref="GeneID:8157076"
CDS 245620..245790
/locus_tag="ECBD_0223"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034484.1"
/db_xref="GI:253771653"
/db_xref="GeneID:8157076"
/translation="MLYECLLNVAITFNVTKRDYLLTINFPAFLNTFLYYKSSHPARR
TSHIIILFSRFV"
gene 245875..246699
/locus_tag="ECBD_0224"
/db_xref="GeneID:8157077"
CDS 245875..246699
/locus_tag="ECBD_0224"
/inference="protein motif:PFAM:PF00165"
/note="regulates genes in response to acid and/or during
stationary phase"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator GadX"
/protein_id="YP_003034485.1"
/db_xref="GI:253771654"
/db_xref="InterPro:IPR000005"
/db_xref="GeneID:8157077"
/translation="MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV
DKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQ
NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT
LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY
HSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL"
misc_feature 245875..246696
/locus_tag="ECBD_0224"
/note="DNA-binding transcriptional regulator GadX;
Provisional; Region: PRK09978"
/db_xref="CDD:137624"
misc_feature 246487..246591
/locus_tag="ECBD_0224"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:215763"
gene 247067..247795
/locus_tag="ECBD_0225"
/db_xref="GeneID:8157078"
CDS 247067..247795
/locus_tag="ECBD_0225"
/inference="protein motif:PFAM:PF00165"
/note="PFAM: helix-turn-helix- domain containing protein
AraC type;
SMART: helix-turn-helix- domain containing protein AraC
type;
KEGG: sfv:SFV_3987 AraC-type regulatory protein"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_003034486.1"
/db_xref="GI:253771655"
/db_xref="InterPro:IPR000005"
/db_xref="GeneID:8157078"
/translation="MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFC
SPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESG
VNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAE
RMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYF
INTFRQYYGVTPHQFAQHSPGTFS"
misc_feature 247067..247771
/locus_tag="ECBD_0225"
/note="transcriptional regulator YdeO; Provisional;
Region: PRK09940"
/db_xref="CDD:182157"
misc_feature 247661..247765
/locus_tag="ECBD_0225"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:215763"
gene complement(248158..251271)
/locus_tag="ECBD_0226"
/db_xref="GeneID:8157079"
CDS complement(248158..251271)
/locus_tag="ECBD_0226"
/inference="protein motif:TFAM:TIGR00915"
/note="TIGRFAM: transporter hydrophobe/amphiphile efflux-1
(HAE1) family;
PFAM: acriflavin resistance protein;
KEGG: sdy:SDY_3537 transporter permease"
/codon_start=1
/transl_table=11
/product="transporter hydrophobe/amphiphile efflux-1
(HAE1) family"
/protein_id="YP_003034487.1"
/db_xref="GI:253771656"
/db_xref="InterPro:IPR001036"
/db_xref="InterPro:IPR004764"
/db_xref="GeneID:8157079"
/translation="MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTIT
VSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDI
AQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVAS
NIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQ
LGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYS
TVARYNGKPAAGIAIKLAAGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIE
ISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINT
LTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLS
AVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPN
ALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEED
QGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGL
AFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMEL
LDNGNLGHEKLTQARNELLSLAAQSPNQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVA
LSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAP
LSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYS
WTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLAT
DLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIEAIIEAARMRLRP
ILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHL
FARFKKA"
misc_feature complement(248173..251271)
/locus_tag="ECBD_0226"
/note="multidrug efflux system protein AcrB; Provisional;
Region: PRK15127"
/db_xref="CDD:185081"
misc_feature complement(249817..>250266)
/locus_tag="ECBD_0226"
/note="Protein export membrane protein; Region: SecD_SecF;
cl14618"
/db_xref="CDD:246677"
gene complement(251296..252453)
/locus_tag="ECBD_0227"
/db_xref="GeneID:8157080"
CDS complement(251296..252453)
/locus_tag="ECBD_0227"
/inference="protein motif:TFAM:TIGR01730"
/note="with MdtF and tolC is involved in resistance to
rhodamine 6G, erythromycin, doxorubicin and other
compounds"
/codon_start=1
/transl_table=11
/product="multidrug efflux system protein MdtE"
/protein_id="YP_003034488.1"
/db_xref="GI:253771657"
/db_xref="InterPro:IPR006143"
/db_xref="GeneID:8157080"
/translation="MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPG
SVNVLSELPGRTVPYEVAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELN
SAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAV
EQATINLQYANVTSPITGVSGKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQD
FLRMKEEVASGQIKQVQGSTPVQLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIF
PNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNAQGKATALILDKDDVVQLREIE
ASKAIGDQWVVTSGLQAGDRVIVSGLQRIRPGIKARAISSSQENASTESKQ"
misc_feature complement(251299..252453)
/locus_tag="ECBD_0227"
/note="multidrug efflux system protein MdtE; Provisional;
Region: PRK09859"
/db_xref="CDD:137559"
sig_peptide complement(252391..252453)
/locus_tag="ECBD_0227"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.993) with cleavage site probability 0.911 at
residue 21"
misc_feature complement(252127..252276)
/locus_tag="ECBD_0227"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature complement(251596..251940)
/locus_tag="ECBD_0227"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:222128"
gene 252513..252791
/locus_tag="ECBD_0228"
/db_xref="GeneID:8157081"
CDS 252513..252791
/locus_tag="ECBD_0228"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034489.1"
/db_xref="GI:253771658"
/db_xref="InterPro:IPR013838"
/db_xref="GeneID:8157081"
/translation="MRDLQTSGIVGLSASKVGYRHSDRHGEVNDKKNVAVLPTVPASI
RATKGSTGGYTYQGNKVVLASPLVITGGNEISICIPRHASHQFQLLMS"
gene complement(252792..253319)
/locus_tag="ECBD_0229"
/db_xref="GeneID:8157082"
CDS complement(252792..253319)
/locus_tag="ECBD_0229"
/inference="similar to AA sequence:KEGG:SFV_3526"
/note="KEGG: sfv:SFV_3526 hypothetical protein"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_003034490.1"
/db_xref="GI:253771659"
/db_xref="InterPro:IPR000792"
/db_xref="GeneID:8157082"
/translation="MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVI
IDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEIT
YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKL
RRMSDIVTLGITSYF"
misc_feature complement(253086..>253259)
/locus_tag="ECBD_0229"
/note="Xylose isomerase-like TIM barrel; Region:
AP_endonuc_2; pfam01261"
/db_xref="CDD:216395"
misc_feature complement(253008..>253115)
/locus_tag="ECBD_0229"
/note="pyruvate kinase; Provisional; Region: PRK05826"
/db_xref="CDD:235619"
gene complement(254118..254690)
/locus_tag="ECBD_0230"
/db_xref="GeneID:8157083"
CDS complement(254118..254690)
/locus_tag="ECBD_0230"
/inference="similar to AA sequence:KEGG:SbBS512_E3909"
/note="KEGG: sbc:SbBS512_E3909 HdeD protein"
/codon_start=1
/transl_table=11
/product="acid-resistance membrane protein"
/protein_id="YP_003034491.1"
/db_xref="GI:253771660"
/db_xref="GeneID:8157083"
/translation="MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFV
SGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPEL
GIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVS
VTLVSTLVGIELIFSAASLFSFASLFVKQQ"
misc_feature complement(254172..254690)
/locus_tag="ECBD_0230"
/note="acid-resistance membrane protein; Provisional;
Region: PRK10209"
/db_xref="CDD:182308"
misc_feature complement(254172..254663)
/locus_tag="ECBD_0230"
/note="Uncharacterized conserved protein [Function
unknown]; Region: HdeD; COG3247"
/db_xref="CDD:225786"
gene 254945..255277
/locus_tag="ECBD_0231"
/db_xref="GeneID:8157084"
CDS 254945..255277
/locus_tag="ECBD_0231"
/inference="protein motif:PFAM:PF06411"
/note="inactive form"
/codon_start=1
/transl_table=11
/product="acid-resistance protein"
/protein_id="YP_003034492.1"
/db_xref="GI:253771661"
/db_xref="InterPro:IPR010486"
/db_xref="GeneID:8157084"
/translation="MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLA
VDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE
WDKIKKDM"
sig_peptide 254945..255010
/locus_tag="ECBD_0231"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.986 at
residue 22"
misc_feature <255041..255265
/locus_tag="ECBD_0231"
/note="acid-resistance protein; Provisional; Region:
PRK10208"
/db_xref="CDD:182307"
gene 255381..255719
/gene="hdeB"
/locus_tag="ECBD_0232"
/db_xref="GeneID:8157085"
CDS 255381..255719
/gene="hdeB"
/locus_tag="ECBD_0232"
/inference="similar to AA sequence:KEGG:S4224"
/note="KEGG: sfx:S4224 acid-resistance protein"
/codon_start=1
/transl_table=11
/product="acid-resistance protein"
/protein_id="YP_003034493.1"
/db_xref="GI:253771662"
/db_xref="GeneID:8157085"
/translation="MGYKMNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQ
EFIDLNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTF
KNQASNDLPN"
sig_peptide 255381..255482
/gene="hdeB"
/locus_tag="ECBD_0232"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.954 at
residue 34"
misc_feature 255411..255716
/gene="hdeB"
/locus_tag="ECBD_0232"
/note="acid-resistance protein; Provisional; Region: hdeB;
PRK11566"
/db_xref="CDD:183204"
gene 255783..256430
/locus_tag="ECBD_0233"
/db_xref="GeneID:8157086"
CDS 255783..256430
/locus_tag="ECBD_0233"
/inference="protein motif:PFAM:PF02308"
/note="inner membrane protein involved in cell
density-dependent acid resistance; part of the acid
fitness island (AFI) of E. coli"
/codon_start=1
/transl_table=11
/product="Mg(2+) transport ATPase"
/protein_id="YP_003034494.1"
/db_xref="GI:253771663"
/db_xref="InterPro:IPR003416"
/db_xref="GeneID:8157086"
/translation="MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSAL
FMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIW
VTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSML
DWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS"
misc_feature 255840..256427
/locus_tag="ECBD_0233"
/note="putative Mg(2+) transport ATPase; Provisional;
Region: PRK09977"
/db_xref="CDD:182178"
misc_feature 255840..256202
/locus_tag="ECBD_0233"
/note="MgtC family; Region: MgtC; pfam02308"
/db_xref="CDD:111223"
gene complement(256472..257002)
/locus_tag="ECBD_0234"
/db_xref="GeneID:8157087"
CDS complement(256472..257002)
/locus_tag="ECBD_0234"
/inference="protein motif:PFAM:PF00196"
/note="PFAM: regulatory protein LuxR;
SMART: regulatory protein LuxR"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_003034495.1"
/db_xref="GI:253771664"
/db_xref="InterPro:IPR000792"
/db_xref="GeneID:8157087"
/translation="MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVI
IDTLMNNVFHSNFLTQIERLKPVHVIIFSPFNIKRCLGKVPVTFVPRTITIIDFVALI
NGSYCSVPEAAVSLSRKQHQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNL
KRINELVRHQHIDYLV"
misc_feature complement(256499..256999)
/locus_tag="ECBD_0234"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:225107"
misc_feature complement(256487..256657)
/locus_tag="ECBD_0234"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(256514..256516,256547..256561,
256565..256570,256574..256579,256601..256609,
256646..256654))
/locus_tag="ECBD_0234"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(256487..256492,256499..256501,
256508..256516,256607..256609,256613..256615,
256619..256621))
/locus_tag="ECBD_0234"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(257158..257724)
/locus_tag="ECBD_0235"
/db_xref="GeneID:8157088"
CDS complement(257158..257724)
/locus_tag="ECBD_0235"
/inference="protein motif:TFAM:TIGR00752"
/note="TIGRFAM: outer membrane lipoprotein, Slp family;
PFAM: outer membrane lipoprotein Slp;
KEGG: sbc:SbBS512_E3904 outer membrane lipoprotein, Slp
family"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein, Slp family"
/protein_id="YP_003034496.1"
/db_xref="GI:253771665"
/db_xref="InterPro:IPR004658"
/db_xref="GeneID:8157088"
/translation="MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQ
PGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFL
DPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
YGAFWPEPGWGAPYYTNAVSQVTPELVK"
sig_peptide complement(257662..257724)
/locus_tag="ECBD_0235"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.992) with cleavage site probability 0.418 at
residue 21"
misc_feature complement(257173..257721)
/locus_tag="ECBD_0235"
/note="outer membrane lipoprotein, Slp family; Region:
slp; TIGR00752"
/db_xref="CDD:233114"
gene complement(257972..259195)
/locus_tag="ECBD_0236"
/db_xref="GeneID:8157089"
CDS complement(257972..259195)
/locus_tag="ECBD_0236"
/inference="similar to AA sequence:KEGG:SFV_3519"
/note="KEGG: sfv:SFV_3519 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034497.1"
/db_xref="GI:253771666"
/db_xref="GeneID:8157089"
/translation="MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQ
PINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETIS
STQLTQQTQSILNQINNIRYEKNKSAECRIIVIANPKPDKAIITKISVEEGIPITFSV
QTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNM
TGQNLSGFVLTLSRFYFEDLLNINFTDANLGDTIFLHKEHPTPKLYKDGQYLDKQIEG
LFSTLLTINDNLLRAKAEIASTIIKFLEARITNLSYNDILKYQQEFQKQCYKQVKAFT
TLSRYNKIQTWAEMSEYQFEVFQYETLNPKKMSHTPYLKRPLPNEKDINYGVEIEIPS
GKRIRLSNHYQNIIP"
gene complement(259824..260249)
/locus_tag="ECBD_0237"
/db_xref="GeneID:8157090"
CDS complement(259824..260249)
/locus_tag="ECBD_0237"
/EC_number="1.20.4.1"
/inference="protein motif:TFAM:TIGR00014"
/note="KEGG: sbc:SbBS512_E3818 arsenate reductase;
TIGRFAM: arsenate reductase;
PFAM: arsenate reductase"
/codon_start=1
/transl_table=11
/product="arsenate reductase"
/protein_id="YP_003034498.1"
/db_xref="GI:253771667"
/db_xref="InterPro:IPR006659"
/db_xref="InterPro:IPR006660"
/db_xref="GeneID:8157090"
/translation="MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDEL
VKLIADMGISVRALLRKNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLG
TRLCRPSEVVLEILPDAQKGAFSKEDGEKVVDEAGKRLK"
misc_feature complement(259905..260240)
/locus_tag="ECBD_0237"
/note="Arsenate Reductase (ArsC) family, ArsC subfamily;
arsenic reductases similar to that encoded by arsC on the
R733 plasmid of Escherichia coli. E. coli ArsC catalyzes
the reduction of arsenate [As(V)] to arsenite [As(III)],
the first step in the...; Region: ArsC_ArsC; cd03034"
/db_xref="CDD:239332"
misc_feature complement(259905..260231)
/locus_tag="ECBD_0237"
/note="ArsC family; Region: ArsC; pfam03960"
/db_xref="CDD:202832"
misc_feature complement(order(259929..259931,259968..259970,
260070..260072,260214..260216))
/locus_tag="ECBD_0237"
/note="catalytic residues [active]"
/db_xref="CDD:239332"
gene complement(260262..261551)
/locus_tag="ECBD_0238"
/db_xref="GeneID:8157091"
CDS complement(260262..261551)
/locus_tag="ECBD_0238"
/inference="protein motif:TFAM:TIGR00935"
/note="TIGRFAM: arsenical pump membrane protein;
PFAM: Arsenical pump membrane protein; citrate
transporter;
KEGG: sbo:SBO_3500 arsenical pump membrane protein"
/codon_start=1
/transl_table=11
/product="arsenical pump membrane protein"
/protein_id="YP_003034499.1"
/db_xref="GI:253771668"
/db_xref="InterPro:IPR000802"
/db_xref="InterPro:IPR004680"
/db_xref="GeneID:8157091"
/translation="MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPG
DIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLG
AAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAI
KDPATFKTGWVVLLLLLVGFFVLEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLR
GAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSI
MNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQ
KNMTISWGYYFRTGIIMTLPVLFVTLAALALRLSFTL"
misc_feature complement(260268..261548)
/locus_tag="ECBD_0238"
/note="arsenical pump membrane protein; Provisional;
Region: PRK15445"
/db_xref="CDD:185342"
misc_feature complement(260286..261545)
/locus_tag="ECBD_0238"
/note="Anion permease ArsB. These permeases have been
shown to export arsenate and antimonite in eubacteria and
archaea. A typical ArsB permease contains 8-13
transmembrane helices and can function either
independently as a chemiosmotic transporter or as a...;
Region: ArsB_permease; cd01118"
/db_xref="CDD:238538"
misc_feature complement(order(260295..260333,260409..260468,
260547..260594,260664..260720,260763..260807,
260838..260876,260964..261008,261072..261143,
261162..261215,261219..261269,261339..261392,
261441..261482,261501..261512))
/locus_tag="ECBD_0238"
/note="transmembrane helices; other site"
/db_xref="CDD:238538"
gene complement(261605..261958)
/locus_tag="ECBD_0239"
/db_xref="GeneID:8157092"
CDS complement(261605..261958)
/locus_tag="ECBD_0239"
/inference="protein motif:PFAM:PF01022"
/note="regulates the expression of of the arsRBC involved
in resistance to arsenic"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor ArsR"
/protein_id="YP_003034500.1"
/db_xref="GI:253771669"
/db_xref="InterPro:IPR001845"
/db_xref="GeneID:8157092"
/translation="MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQ
PKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKVQAIVRN
LARQNCSGDSKNICS"
misc_feature complement(261734..261931)
/locus_tag="ECBD_0239"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:238042"
misc_feature complement(order(261785..261787,261878..261880,
261887..261892,261899..261904,261911..261913,
261920..261922,261926..261931))
/locus_tag="ECBD_0239"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238042"
misc_feature complement(order(261746..261754,261767..261775,
261791..261796,261800..261805,261812..261817,
261821..261832,261857..261865,261905..261913,
261923..261928))
/locus_tag="ECBD_0239"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238042"
misc_feature complement(order(261854..261856,261863..261865))
/locus_tag="ECBD_0239"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:238042"
gene complement(262497..262670)
/locus_tag="ECBD_0240"
/db_xref="GeneID:8157093"
CDS complement(262497..262670)
/locus_tag="ECBD_0240"
/inference="similar to AA sequence:KEGG:EFER_3494"
/note="KEGG: efe:EFER_3494 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034501.1"
/db_xref="GI:253771670"
/db_xref="GeneID:8157093"
/translation="MHPLTHPLPVTAHVSLLDKNSLTPARASVNGTTRTSDQDFESVY
AHCQSENASELTG"
gene complement(262835..264187)
/locus_tag="ECBD_0241"
/db_xref="GeneID:8157094"
CDS complement(262835..264187)
/locus_tag="ECBD_0241"
/inference="protein motif:TFAM:TIGR01421"
/note="catalyzes the reduction of 2 glutathione to
glutathione disulfide; maintains high levels of reduced
glutathione in the cytosol; involved in redox regulation
and oxidative defense"
/codon_start=1
/transl_table=11
/product="glutathione reductase"
/protein_id="YP_003034502.1"
/db_xref="GI:253771671"
/db_xref="InterPro:IPR000103"
/db_xref="InterPro:IPR000815"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR004099"
/db_xref="InterPro:IPR006322"
/db_xref="InterPro:IPR012999"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:8157094"
/translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVN
VGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENV
LGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGF
FALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVM
NAEGPQLHTNAIPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAG
VKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHL
DYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMK
LVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
"
misc_feature complement(262838..264187)
/locus_tag="ECBD_0241"
/note="glutathione reductase; Validated; Region: PRK06116"
/db_xref="CDD:235701"
misc_feature complement(263591..>263812)
/locus_tag="ECBD_0241"
/note="NAD(P)-binding Rossmann-like domain; Region:
NAD_binding_8; cl17500"
/db_xref="CDD:248054"
misc_feature complement(263441..263683)
/locus_tag="ECBD_0241"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:215691"
misc_feature complement(262838..263173)
/locus_tag="ECBD_0241"
/note="Pyridine nucleotide-disulphide oxidoreductase,
dimerisation domain; Region: Pyr_redox_dim; pfam02852"
/db_xref="CDD:217252"
gene complement(264259..265101)
/locus_tag="ECBD_0242"
/db_xref="GeneID:8157095"
CDS complement(264259..265101)
/locus_tag="ECBD_0242"
/inference="protein motif:PFAM:PF04378"
/note="PFAM: protein of unknown function DUF519;
KEGG: sbo:SBO_3497 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034503.1"
/db_xref="GI:253771672"
/db_xref="InterPro:IPR002052"
/db_xref="InterPro:IPR007473"
/db_xref="GeneID:8157095"
/translation="MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAG
AGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPL
IARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRK
ILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSW
IVPE"
misc_feature complement(264262..265098)
/locus_tag="ECBD_0242"
/note="Protein involved in catabolism of external DNA
[General function prediction only]; Region: ComJ; COG2961"
/db_xref="CDD:225509"
gene 265304..267346
/locus_tag="ECBD_0243"
/db_xref="GeneID:8157096"
CDS 265304..267346
/locus_tag="ECBD_0243"
/EC_number="3.4.24.70"
/inference="protein motif:PRIAM:3.4.24.70"
/note="PFAM: peptidase M3A and M3B thimet/oligopeptidase
F"
/codon_start=1
/transl_table=11
/product="oligopeptidase A"
/protein_id="YP_003034504.1"
/db_xref="GI:253771673"
/db_xref="InterPro:IPR001567"
/db_xref="GeneID:8157096"
/translation="MTNPLLTPFELPPFSKILPEHVVPAVTKALNDCRENVERVVAQG
APYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQ
HEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPIEKQQRYGEIATRLS
ELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPS
YLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFE
NYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDI
AYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVR
FFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNR
PVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENW
CWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFR
PDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADA
FSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGIKG"
misc_feature 265304..267343
/locus_tag="ECBD_0243"
/note="oligopeptidase A; Provisional; Region: PRK10911"
/db_xref="CDD:182832"
misc_feature 265361..267337
/locus_tag="ECBD_0243"
/note="Peptidase family M3 dipeptidyl carboxypeptidase
(DCP); Region: M3A_DCP; cd06456"
/db_xref="CDD:188995"
misc_feature order(266564..266572,266708..266713,266720..266722,
266798..266800,266807..266809,266954..266956,
267080..267085,267101..267106,267116..267124,
267134..267136,267143..267145)
/locus_tag="ECBD_0243"
/note="active site"
/db_xref="CDD:188995"
misc_feature order(266708..266710,266720..266722,266798..266800)
/locus_tag="ECBD_0243"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:188995"
gene 267354..268106
/locus_tag="ECBD_0244"
/db_xref="GeneID:8157097"
CDS 267354..268106
/locus_tag="ECBD_0244"
/inference="protein motif:PFAM:PF04445"
/note="predicted SAM-dependent methyltransferase"
/codon_start=1
/transl_table=11
/product="methyltransferase"
/protein_id="YP_003034505.1"
/db_xref="GI:253771674"
/db_xref="InterPro:IPR007536"
/db_xref="GeneID:8157097"
/translation="MKICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLEL
RKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD
AFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD
ITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVK
RPDYAPPLANVATPNAVVTKGHRFDIYAGTPV"
misc_feature 267624..>267881
/locus_tag="ECBD_0244"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(267636..267656,267702..267707,267807..267815,
267864..267866)
/locus_tag="ECBD_0244"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(268155..269624)
/locus_tag="ECBD_0245"
/db_xref="GeneID:8157098"
CDS complement(268155..269624)
/locus_tag="ECBD_0245"
/inference="protein motif:TFAM:TIGR00924"
/note="member of the POT family of peptide transporters;
probable proton-dependent peptide transporter function"
/codon_start=1
/transl_table=11
/product="inner membrane transporter YhiP"
/protein_id="YP_003034506.1"
/db_xref="GI:253771675"
/db_xref="InterPro:IPR000109"
/db_xref="InterPro:IPR005279"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8157098"
/translation="MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQ
LGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSL
LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIAL
SLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFKPMSFSKLLYVL
LGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLML
EAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVLASPILAGIYT
HLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG
ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLET
LPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIATPESH"
misc_feature complement(268158..269624)
/locus_tag="ECBD_0245"
/note="dipeptide/tripeptide permease B; Provisional;
Region: PRK10207"
/db_xref="CDD:182306"
misc_feature complement(<269034..269579)
/locus_tag="ECBD_0245"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(269157..269159,269175..269180,
269187..269192,269232..269234,269241..269246,
269253..269258,269265..269270,269412..269417,
269421..269426,269436..269438,269445..269450,
269457..269459,269508..269513,269517..269525,
269535..269537))
/locus_tag="ECBD_0245"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature complement(268341..269384)
/locus_tag="ECBD_0245"
/note="POT family; Region: PTR2; pfam00854"
/db_xref="CDD:216153"
gene complement(269942..270376)
/locus_tag="ECBD_0246"
/db_xref="GeneID:8157099"
CDS complement(269942..270376)
/locus_tag="ECBD_0246"
/inference="protein motif:PFAM:PF00582"
/note="PFAM: UspA domain protein;
KEGG: cko:CKO_04943 hypothetical protein"
/codon_start=1
/transl_table=11
/product="UspA domain protein"
/protein_id="YP_003034507.1"
/db_xref="GI:253771676"
/db_xref="InterPro:IPR006016"
/db_xref="GeneID:8157099"
/translation="MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYS
DLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKY
DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE"
misc_feature complement(269966..270364)
/locus_tag="ECBD_0246"
/note="Usp: Universal stress protein family. The universal
stress protein Usp is a small cytoplasmic bacterial
protein whose expression is enhanced when the cell is
exposed to stress agents. Usp enhances the rate of cell
survival during prolonged exposure to...; Region:
USP_Like; cd00293"
/db_xref="CDD:238182"
misc_feature complement(order(270008..270016,270041..270046,
270047..270052,270260..270262,270344..270352))
/locus_tag="ECBD_0246"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:238182"
gene 270767..271102
/locus_tag="ECBD_0247"
/db_xref="GeneID:8159320"
CDS 270767..271102
/locus_tag="ECBD_0247"
/inference="similar to AA sequence:KEGG:SFV_3506"
/note="ppGpp-dependent, membrane associated, stress
protein produced under conditions of nutrient deprivation,
osmotic shock and oxidative stress"
/codon_start=1
/transl_table=11
/product="universal stress protein UspB"
/protein_id="YP_003034508.1"
/db_xref="GI:253771677"
/db_xref="GeneID:8159320"
/translation="MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYV
DGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVV
SLIALMIWH"
misc_feature 270767..271099
/locus_tag="ECBD_0247"
/note="universal stress protein UspB; Provisional; Region:
PRK04960"
/db_xref="CDD:235323"
gene complement(271346..272845)
/locus_tag="ECBD_0248"
/db_xref="GeneID:8159321"
CDS complement(271346..272845)
/locus_tag="ECBD_0248"
/inference="protein motif:PFAM:PF01384"
/note="PFAM: phosphate transporter;
KEGG: sdy:SDY_3569 low-affinity phosphate transport"
/codon_start=1
/transl_table=11
/product="phosphate transporter"
/protein_id="YP_003034509.1"
/db_xref="GI:253771678"
/db_xref="InterPro:IPR001204"
/db_xref="GeneID:8159321"
/translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
TRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLL
AAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLI
VSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSA
IGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQ
HPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSL
DQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVAL
ALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVL
SSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL"
misc_feature complement(<272093..272770)
/locus_tag="ECBD_0248"
/note="Phosphate/sulphate permeases [Inorganic ion
transport and metabolism]; Region: PitA; COG0306"
/db_xref="CDD:223383"
misc_feature complement(271349..>271708)
/locus_tag="ECBD_0248"
/note="Phosphate/sulphate permeases [Inorganic ion
transport and metabolism]; Region: PitA; COG0306"
/db_xref="CDD:223383"
gene 273077..274279
/locus_tag="ECBD_0249"
/db_xref="GeneID:8159322"
CDS 273077..274279
/locus_tag="ECBD_0249"
/inference="protein motif:PFAM:PF03486"
/note="PFAM: HI0933 family protein; FAD-dependent pyridine
nucleotide-disulphide oxidoreductase; FAD dependent
oxidoreductase;
KEGG: sbc:SbBS512_E3830 pyridine nucleotide-disulfide
oxidoreductase family protein"
/codon_start=1
/transl_table=11
/product="HI0933 family protein"
/protein_id="YP_003034510.1"
/db_xref="GI:253771679"
/db_xref="InterPro:IPR004792"
/db_xref="InterPro:IPR006076"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:8159322"
/translation="MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILM
SGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLF
CDDSAQQIVNMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTVGCEKLVIATG
GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITA
ENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPN
QSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGY
RTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQ
DLIAAKSS"
misc_feature 273077..274273
/locus_tag="ECBD_0249"
/note="Predicted flavoproteins [General function
prediction only]; Region: COG2081"
/db_xref="CDD:224992"
sig_peptide 273077..273145
/locus_tag="ECBD_0249"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.991) with cleavage site probability 0.954 at
residue 23"
misc_feature 273158..>273625
/locus_tag="ECBD_0249"
/note="NAD(P)-binding Rossmann-like domain; Region:
NAD_binding_8; cl17500"
/db_xref="CDD:248054"
gene complement(274594..275646)
/locus_tag="ECBD_0250"
/db_xref="GeneID:8159323"
CDS complement(274594..275646)
/locus_tag="ECBD_0250"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034511.1"
/db_xref="GI:253771680"
/db_xref="GeneID:8159323"
/translation="MNIYIGWLFKLIPLIMGLICIALGGFVLESSGQSEYFVAGHVLI
SLAAICLALFTTAFIIISQLTRGVNTFYNTLFPIIGYAGSIITMIWGWALLAGNDVMA
DEFVAGHVIFGVGMIAACVSTVAASSGHFLLIPKNAAGSKSDGTPVQAYSSLIGNCLI
AVPVLLTLLGFIWSITLLRSADITPHYVAGHVLLGLTAICACLIGLVATIVHQTRNTF
STKEHWLWCYWVIFLGSITVLQGIYVLVSSDASARLAPGIILICLGMICYSIFSKVWL
LALVWRRTCSLANRIPMIPVFTCLFCLFLASFLAEMAQTDMGYFIPSRVLVGLGAVCF
TLFSIVSILEAGSAKK"
misc_feature complement(274603..275646)
/locus_tag="ECBD_0250"
/note="Protein of unknown function (DUF2776); Region:
DUF2776; pfam10951"
/db_xref="CDD:151398"
sig_peptide complement(275557..275646)
/locus_tag="ECBD_0250"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.661) with cleavage site probability 0.311 at
residue 30"
gene 276029..277636
/locus_tag="ECBD_0251"
/db_xref="GeneID:8159324"
CDS 276029..277636
/locus_tag="ECBD_0251"
/inference="similar to AA sequence:KEGG:SF3505"
/note="KEGG: sfl:SF3505 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034512.1"
/db_xref="GI:253771681"
/db_xref="GeneID:8159324"
/translation="MKAIDNQIRNISSSHQDKHSDKVNSHQHHGKVDKTHRAKIVEFD
KLDNDSQIDNDFGLHIIYFLQHGHWKVNDRSHQMEKVWFYNSEPSIDIQEYNRFADNT
TDTFIFTIIPDNNHVLKLSSPITVTVECKGGYYFINSSGDKSDIIYKVDGLSIIARNF
FTLLSGNFKPDWRWDVSKETFTKEKFDSYVKSVFSKIDFYKQCGVINPQNANTAYFGD
TDGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEEMASSAYKHKNNKVLYDLLNTRD
MILNELHQHVFLKDDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMEGNKDSRI
NKNVVVLAGNHEINFNGNYTARLANHKLSAGDTYNLIKTLDVCNYDSERQVLTSHHGI
IRDEEKKCYCLGALQVPFNQMKNPTDPEELANIFNKKHKEHMDDPLFHLIRSNTLKPT
PVYANYFDNTTDFRPARERIFICGETLKGEDPSKYIRQKYGHHGPGVDHNQQFDNGIM
GLNSLKEARDKNNKIIYSSGLSCFQPH"
misc_feature 276653..277624
/locus_tag="ECBD_0251"
/note="Domain of unknown function (DUF4049); Region:
DUF4049; pfam13258"
/db_xref="CDD:205438"
gene 277898..279520
/locus_tag="ECBD_0252"
/db_xref="GeneID:8159325"
CDS 277898..279520
/locus_tag="ECBD_0252"
/inference="similar to AA sequence:KEGG:S4259"
/note="KEGG: sfx:S4259 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034513.1"
/db_xref="GI:253771682"
/db_xref="GeneID:8159325"
/translation="MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDD
ISSIARTMLGEVVEKIDDWQIERFQQSIQDDKISFTIQTDHSEKYSMLSGMRAHILRR
NNNYQFIVTINSKNYGCSLDNTDVNWCSIVYLLNNMTVNDNANDVAVTESYKPIWNWK
ISQYNVSDIKFETMINPQFADRIYFSNCLPVDPTSTRPTYFGDTDGSVGAVLFALFAT
GHLGIMAEGENFLSQLLNIEDEVLNVLLRENFNEQLNTNVNTIISILNRRDIILESLH
PYLVINKDAVTPCTFLGDQTGDRFSNICGDQFIIDLLKRIMSINENVHVLAGNHETNC
NGNYMQNFTRMKPLDEDTYSGIKDYPVCFYDPKYKIMANHHGITFDDQRKRYIIGPIT
VSIDEMTNALDPVELAAIINKKHHAIINGKKFKTSRAISCRSFNRYFSVSTDYRPKLE
ALLACSQMLGINQVVAHNGNGGRERIGETGTVLGLNARDSKHAGRMFSMHNCQINPGA
GPEITTPWKSYQHEKNRNGLMPLIRRRTMLQL"
misc_feature 278477..279406
/locus_tag="ECBD_0252"
/note="Domain of unknown function (DUF4049); Region:
DUF4049; pfam13258"
/db_xref="CDD:205438"
gene 279886..280953
/locus_tag="ECBD_0253"
/db_xref="GeneID:8159326"
CDS 279886..280953
/locus_tag="ECBD_0253"
/inference="protein motif:PFAM:PF00529"
/note="PFAM: secretion protein HlyD;
KEGG: sfv:SFV_3488 hypothetical protein"
/codon_start=1
/transl_table=11
/product="secretion protein HlyD"
/protein_id="YP_003034514.1"
/db_xref="GI:253771683"
/db_xref="InterPro:IPR003997"
/db_xref="InterPro:IPR006143"
/db_xref="GeneID:8159326"
/translation="MDKSKRHLAWWVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIE
ATEVDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVA
AAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAA
ESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPR
DGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAP
DLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGV
AWVRVNEELPWPDDLVVRLPQ"
sig_peptide 279886..279957
/locus_tag="ECBD_0253"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.861) with cleavage site probability 0.380 at
residue 24"
misc_feature 280024..280902
/locus_tag="ECBD_0253"
/note="HlyD family secretion protein; Region: HlyD;
pfam00529"
/db_xref="CDD:215974"
misc_feature 280024..280155
/locus_tag="ECBD_0253"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature 280522..280860
/locus_tag="ECBD_0253"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:222128"
gene 280950..283685
/locus_tag="ECBD_0254"
/db_xref="GeneID:8159327"
CDS 280950..283685
/locus_tag="ECBD_0254"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter; ABC-2 type transporter;
SMART: ATPase AAA;
KEGG: sbc:SbBS512_E3836 ABC transporter ATP binding
protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_003034515.1"
/db_xref="GI:253771684"
/db_xref="InterPro:IPR000412"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013525"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8159327"
/translation="MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLI
GPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYH
TLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCC
ALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWL
VAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIA
IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAW
LFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMS
ERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLM
VDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFI
AYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYSRREALELRRDPVRSTLALM
GTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDEL
DRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRAETVKGYVQAMHQSWL
QDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSALSVVR
EKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVFGVPHKGSFLTL
TLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDPVASLEGPGR
WIGEVYPTSHFLTIARGTFSKALDLTDLWQLFIPLLIAIPLVMGLSILLLKKQEG"
misc_feature 280989..281627
/locus_tag="ECBD_0254"
/note="ATP-binding cassette domain of the drug resistance
transporter and related proteins, subfamily A; Region:
ABC_DR_subfamily_A; cd03230"
/db_xref="CDD:213197"
misc_feature 281004..282431
/locus_tag="ECBD_0254"
/note="ATPase components of various ABC-type transport
systems, contain duplicated ATPase [General function
prediction only]; Region: COG1123"
/db_xref="CDD:224048"
misc_feature 281082..281105
/locus_tag="ECBD_0254"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213197"
misc_feature order(281091..281096,281100..281108,281229..281231,
281463..281468,281568..281570)
/locus_tag="ECBD_0254"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213197"
misc_feature 281220..281231
/locus_tag="ECBD_0254"
/note="Q-loop/lid; other site"
/db_xref="CDD:213197"
misc_feature 281391..281420
/locus_tag="ECBD_0254"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213197"
misc_feature 281451..281468
/locus_tag="ECBD_0254"
/note="Walker B; other site"
/db_xref="CDD:213197"
misc_feature 281475..281486
/locus_tag="ECBD_0254"
/note="D-loop; other site"
/db_xref="CDD:213197"
misc_feature 281556..281576
/locus_tag="ECBD_0254"
/note="H-loop/switch region; other site"
/db_xref="CDD:213197"
misc_feature 281778..282404
/locus_tag="ECBD_0254"
/note="ATP-binding cassette domain of the drug resistance
transporter and related proteins, subfamily A; Region:
ABC_DR_subfamily_A; cd03230"
/db_xref="CDD:213197"
misc_feature 281874..281897
/locus_tag="ECBD_0254"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213197"
misc_feature order(281883..281888,281892..281900,282015..282017,
282243..282248,282345..282347)
/locus_tag="ECBD_0254"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213197"
misc_feature 282006..282017
/locus_tag="ECBD_0254"
/note="Q-loop/lid; other site"
/db_xref="CDD:213197"
misc_feature 282171..282200
/locus_tag="ECBD_0254"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213197"
misc_feature 282231..282248
/locus_tag="ECBD_0254"
/note="Walker B; other site"
/db_xref="CDD:213197"
misc_feature 282255..282266
/locus_tag="ECBD_0254"
/note="D-loop; other site"
/db_xref="CDD:213197"
misc_feature 282333..282353
/locus_tag="ECBD_0254"
/note="H-loop/switch region; other site"
/db_xref="CDD:213197"
misc_feature 282774..283679
/locus_tag="ECBD_0254"
/note="ABC-type multidrug transport system, permease
component [Defense mechanisms]; Region: COG0842"
/db_xref="CDD:223912"
misc_feature <283161..283679
/locus_tag="ECBD_0254"
/note="ABC-2 family transporter protein; Region:
ABC2_membrane_2; pfam12679"
/db_xref="CDD:221706"
gene 283685..284809
/locus_tag="ECBD_0255"
/db_xref="GeneID:8159328"
CDS 283685..284809
/locus_tag="ECBD_0255"
/inference="protein motif:PFAM:PF01061"
/note="PFAM: ABC transporter;
KEGG: sfv:SFV_3486 transporter"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_003034516.1"
/db_xref="GI:253771685"
/db_xref="InterPro:IPR000412"
/db_xref="InterPro:IPR013525"
/db_xref="GeneID:8159328"
/translation="MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTP
GSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIP
PNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVS
LETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPF
EIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIF
MGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAI
LYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA"
sig_peptide 283685..283807
/locus_tag="ECBD_0255"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.958) with cleavage site probability 0.777 at
residue 41"
misc_feature 283934..284788
/locus_tag="ECBD_0255"
/note="ABC-type multidrug transport system, permease
component [Defense mechanisms]; Region: COG0842"
/db_xref="CDD:223912"
misc_feature <284219..284692
/locus_tag="ECBD_0255"
/note="ABC-2 type transporter; Region: ABC2_membrane;
pfam01061"
/db_xref="CDD:216273"
gene complement(284974..286110)
/locus_tag="ECBD_0256"
/db_xref="GeneID:8159329"
CDS complement(284974..286110)
/locus_tag="ECBD_0256"
/inference="protein motif:PFAM:PF01609"
/note="PFAM: transposase IS4 family protein;
KEGG: ssn:SSON_0260 receptor"
/codon_start=1
/transl_table=11
/product="transposase IS4 family protein"
/protein_id="YP_003034517.1"
/db_xref="GI:253771686"
/db_xref="InterPro:IPR002559"
/db_xref="GeneID:8159329"
/translation="MELKKLMEHISIIPDYRQTWKVEHKLSDILLLTICAVISGAEGW
EDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDD
KDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAIPELLN
MLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGTQGRLNKAFEEKFPLKELNNP
EHDSYAISEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKE
PEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFS
GIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS"
misc_feature complement(285826..286095)
/locus_tag="ECBD_0256"
/note="DDE_Tnp_1-associated; Region: DDE_Tnp_1_assoc;
pfam13808"
/db_xref="CDD:222393"
misc_feature complement(285082..285813)
/locus_tag="ECBD_0256"
/note="Transposase DDE domain; Region: DDE_Tnp_1;
pfam01609"
/db_xref="CDD:216602"
misc_feature complement(285346..285690)
/locus_tag="ECBD_0256"
/note="Transposase [DNA replication, recombination, and
repair]; Region: COG5433"
/db_xref="CDD:227720"
misc_feature complement(284995..285339)
/locus_tag="ECBD_0256"
/note="Transposase [DNA replication, recombination, and
repair]; Region: COG5433"
/db_xref="CDD:227720"
gene complement(286356..286601)
/locus_tag="ECBD_0257"
/db_xref="GeneID:8159330"
CDS complement(286356..286601)
/locus_tag="ECBD_0257"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sei:SPC_1578 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034518.1"
/db_xref="GI:253771687"
/db_xref="GeneID:8159330"
/translation="MSNTYQKRKASKEYGLYNKCKKLNDDELFRLLDDRNSLKRISSA
RVLQLRGGQDAVRLAIEFCTDKNYIRRDIGAFILGQI"
misc_feature complement(<286359..286601)
/locus_tag="ECBD_0257"
/note="putative lyase; Provisional; Region: PRK09687"
/db_xref="CDD:170047"
gene complement(286706..287089)
/locus_tag="ECBD_0258"
/db_xref="GeneID:8159331"
CDS complement(286706..287089)
/locus_tag="ECBD_0258"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034519.1"
/db_xref="GI:253771688"
/db_xref="GeneID:8159331"
/translation="MSAEFMVICKKILFRNCVIVSLFVFTYNTWAQCNNNIKIMRKYE
SEGKYTVRNLVKNKAIALGLAEIYVKNRYGQDAAEEEKPYEITELTTSWVVEGTIHSD
QIAGGVFIIEIGKNDGRILNFGHGK"
gene complement(287061..291296)
/locus_tag="ECBD_0259"
/db_xref="GeneID:8159332"
CDS complement(287061..291296)
/locus_tag="ECBD_0259"
/inference="protein motif:TFAM:TIGR01643"
/note="TIGRFAM: hypothetical protein;
PFAM: RHS protein; YD repeat-containing protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034520.1"
/db_xref="GI:253771689"
/db_xref="InterPro:IPR001826"
/db_xref="InterPro:IPR006530"
/db_xref="GeneID:8159332"
/translation="MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVT
SGHPVNPLLGAKVLPGETDIALPAPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADI
RLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVLRLNEGHRLAALWQ
ALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGR
TQTFHREAAGEFSGEITGVTDGAGRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDT
LPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVR
SFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDHITITDS
LDRREVLHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRTQTDAAGRTTEYSPDVVT
GLITRITTPDGRASAFYYNHHNQLTSATGPDGLELRREYDELGRLIQETAPDGDITRY
RYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHRE
EGLSQYRAYDSRGQLIAVKDTQGHETRYEYNIAGDLTAVIAPDGSRNGTQYDAWGKAV
RTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLT
GKLIRSEDEGLVTHWHYDEADRLTHRTVKGETAERWQYDERGWLTDISHISEGHRVAV
HYRYDEKGRLTGERQTVHHPETEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYG
SGWLSGMKLGDTPLVEYTRDRLHRETLRSFGRYELSTAYTPAGQLQSQHLNSLQYDRD
YTWNDNGELIRISSPRQTRSYSYSTTGRLTSVHTTAANLDIRIPYATDPAGNRLPDPE
LHPDSTLSMWPDNRIARDAHYLYRYDRYGRLTEKTDLIPEGVIRTDDERTHQYHYDSQ
HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWD
GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS
VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY
HCDHRGLPLALISTEGATAWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY
NRHRYYDPLQGRYITQDPIGLKGGWNLYGYQLNPISDIDPLGLSMWEDAKSGACTNGL
CGTLSAMIGPDKFDSIDSTAYDALNKINSQSICEDKEFAGLICKDNSGRYFSTAPNRG
ERKGSYPFNSPCPNGTEKVSAYHTHGADSHGEYWDEIFSGKDEKIVKSKDNNIKSFYL
GTPSGNFKAIDNHGKEITNRKGLPNVCRVHGNM"
misc_feature complement(291210..>291290)
/locus_tag="ECBD_0259"
/note="PAAR motif; Region: PAAR_motif; cl15808"
/db_xref="CDD:247079"
misc_feature complement(289908..290024)
/locus_tag="ECBD_0259"
/note="RHS Repeat; Region: RHS_repeat; pfam05593"
/db_xref="CDD:218649"
misc_feature complement(289782..289895)
/locus_tag="ECBD_0259"
/note="RHS Repeat; Region: RHS_repeat; pfam05593"
/db_xref="CDD:218649"
misc_feature complement(289593..289700)
/locus_tag="ECBD_0259"
/note="RHS Repeat; Region: RHS_repeat; pfam05593"
/db_xref="CDD:218649"
misc_feature complement(287064..289691)
/locus_tag="ECBD_0259"
/note="Rhs family protein [Cell envelope biogenesis, outer
membrane]; Region: RhsA; COG3209"
/db_xref="CDD:225750"
misc_feature complement(289461..289574)
/locus_tag="ECBD_0259"
/note="RHS Repeat; Region: RHS_repeat; pfam05593"
/db_xref="CDD:218649"
misc_feature complement(289275..289388)
/locus_tag="ECBD_0259"
/note="RHS Repeat; Region: RHS_repeat; pfam05593"
/db_xref="CDD:218649"
misc_feature complement(287748..287870)
/locus_tag="ECBD_0259"
/note="RHS protein; Region: RHS; pfam03527"
/db_xref="CDD:112350"
misc_feature complement(287556..287789)
/locus_tag="ECBD_0259"
/note="RHS repeat-associated core domain; Region:
Rhs_assc_core; TIGR03696"
/db_xref="CDD:234316"
misc_feature complement(287109..287465)
/locus_tag="ECBD_0259"
/note="Domain of unknown function (DUF4329); Region:
DUF4329; pfam14220"
/db_xref="CDD:222602"
gene complement(291499..291900)
/locus_tag="ECBD_0260"
/db_xref="GeneID:8159333"
CDS complement(291499..291900)
/locus_tag="ECBD_0260"
/inference="protein motif:TFAM:TIGR02793"
/note="Inhibits transcription at high concentrations of
nickel"
/codon_start=1
/transl_table=11
/product="nickel responsive regulator"
/protein_id="YP_003034521.1"
/db_xref="GI:253771690"
/db_xref="InterPro:IPR002145"
/db_xref="InterPro:IPR014160"
/db_xref="InterPro:IPR014864"
/db_xref="GeneID:8159333"
/translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA
TQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLK
GDMGDVQHFADDVIAQRGVRHGHLQCLPKED"
misc_feature complement(291502..291900)
/locus_tag="ECBD_0260"
/note="nickel responsive regulator; Provisional; Region:
PRK02967"
/db_xref="CDD:235093"
misc_feature complement(291511..291744)
/locus_tag="ECBD_0260"
/note="NikR C terminal nickel binding domain; Region:
NikR_C; pfam08753"
/db_xref="CDD:204052"
gene complement(291906..292712)
/gene="nikE"
/locus_tag="ECBD_0261"
/db_xref="GeneID:8159334"
CDS complement(291906..292712)
/gene="nikE"
/locus_tag="ECBD_0261"
/inference="protein motif:TFAM:TIGR02769"
/note="with NikABCD is involved with nickel transport into
the cell"
/codon_start=1
/transl_table=11
/product="nickel transporter ATP-binding protein NikE"
/protein_id="YP_003034522.1"
/db_xref="GI:253771691"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR014137"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8159334"
/translation="MTLLNVCGLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALL
GRSGCGKSTLARLLVGLESPSQGNISWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAV
NPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRV
CLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERF
CQRVMVMDNGQIVETQVVGDKLTFSSDAGRVLQNAVLPAFPVRRRTSEKV"
misc_feature complement(291909..292712)
/gene="nikE"
/locus_tag="ECBD_0261"
/note="nickel transporter ATP-binding protein NikE;
Provisional; Region: nikE; PRK10419"
/db_xref="CDD:236689"
misc_feature complement(292014..292706)
/gene="nikE"
/locus_tag="ECBD_0261"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature complement(292557..292580)
/gene="nikE"
/locus_tag="ECBD_0261"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature complement(order(292083..292085,292182..292187,
292425..292427,292554..292562,292566..292571))
/gene="nikE"
/locus_tag="ECBD_0261"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature complement(292425..292436)
/gene="nikE"
/locus_tag="ECBD_0261"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature complement(292230..292259)
/gene="nikE"
/locus_tag="ECBD_0261"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature complement(292182..292199)
/gene="nikE"
/locus_tag="ECBD_0261"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature complement(292164..292175)
/gene="nikE"
/locus_tag="ECBD_0261"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature complement(292077..292097)
/gene="nikE"
/locus_tag="ECBD_0261"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
gene complement(292709..293473)
/gene="nikD"
/locus_tag="ECBD_0262"
/db_xref="GeneID:8159335"
CDS complement(292709..293473)
/gene="nikD"
/locus_tag="ECBD_0262"
/inference="protein motif:TFAM:TIGR02770"
/note="with NikABCE is involved in nickel transport into
the cell"
/codon_start=1
/transl_table=11
/product="nickel transporter ATP-binding protein NikD"
/protein_id="YP_003034523.1"
/db_xref="GI:253771692"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR014138"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8159335"
/translation="MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSL
TCAATLGILPAGVRQTAGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHA
RETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESP
FIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGK
IVEQGDVETLFNAPKHTVTRSLVSAHLALYGMELAS"
misc_feature complement(292712..293473)
/gene="nikD"
/locus_tag="ECBD_0262"
/note="nickel transporter ATP-binding protein NikD;
Provisional; Region: nikD; PRK10418"
/db_xref="CDD:236688"
misc_feature complement(292805..293461)
/gene="nikD"
/locus_tag="ECBD_0262"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature complement(293345..293368)
/gene="nikD"
/locus_tag="ECBD_0262"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature complement(order(292877..292879,292976..292981,
293216..293218,293342..293350,293354..293359))
/gene="nikD"
/locus_tag="ECBD_0262"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature complement(293216..293227)
/gene="nikD"
/locus_tag="ECBD_0262"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature complement(293024..293053)
/gene="nikD"
/locus_tag="ECBD_0262"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature complement(292976..292993)
/gene="nikD"
/locus_tag="ECBD_0262"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature complement(292958..292969)
/gene="nikD"
/locus_tag="ECBD_0262"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature complement(292871..292891)
/gene="nikD"
/locus_tag="ECBD_0262"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
misc_feature complement(<292745..292822)
/gene="nikD"
/locus_tag="ECBD_0262"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:244611"
gene complement(293473..294306)
/gene="nikC"
/locus_tag="ECBD_0263"
/db_xref="GeneID:8159336"
CDS complement(293473..294306)
/gene="nikC"
/locus_tag="ECBD_0263"
/inference="protein motif:TFAM:TIGR02790"
/note="with NikABDE is involved in nickel transport into
the cell"
/codon_start=1
/transl_table=11
/product="nickel transporter permease NikC"
/protein_id="YP_003034524.1"
/db_xref="GI:253771693"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR014157"
/db_xref="GeneID:8159336"
/translation="MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSR
LLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGR
VDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISL
RQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVT
APTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHA
H"
sig_peptide complement(294223..294306)
/gene="nikC"
/locus_tag="ECBD_0263"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.995) with cleavage site probability 0.905 at
residue 28"
misc_feature complement(293476..294291)
/gene="nikC"
/locus_tag="ECBD_0263"
/note="nickel transporter permease NikC; Provisional;
Region: nikC; PRK10417"
/db_xref="CDD:236687"
misc_feature complement(293518..294021)
/gene="nikC"
/locus_tag="ECBD_0263"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(293518..293523,293530..293535,
293542..293547,293551..293556,293563..293568,
293626..293631,293671..293676,293683..293694,
293713..293715,293722..293727,293767..293769,
293818..293820,293827..293832,293842..293844,
293848..293853,293860..293862,293866..293868,
293872..293877,293926..293928,293932..293937,
293944..293973,293977..293988,294016..294018))
/gene="nikC"
/locus_tag="ECBD_0263"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(293677..293694,293926..293970))
/gene="nikC"
/locus_tag="ECBD_0263"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(293566..293568,293626..293628,
293635..293637,293674..293676,293890..293892,
293926..293928))
/gene="nikC"
/locus_tag="ECBD_0263"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(293746..293748,293758..293763,
293779..293817))
/gene="nikC"
/locus_tag="ECBD_0263"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(294303..295247)
/locus_tag="ECBD_0264"
/db_xref="GeneID:8159337"
CDS complement(294303..295247)
/locus_tag="ECBD_0264"
/inference="protein motif:TFAM:TIGR02789"
/note="with NikACDE is involved in nickel transport into
the cell"
/codon_start=1
/transl_table=11
/product="nickel transporter permease NikB"
/protein_id="YP_003034525.1"
/db_xref="GI:253771694"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR014156"
/db_xref="GeneID:8159337"
/translation="MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNL
PPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATL
ELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSV
YLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLND
KQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPV
IQCFTLMMVVVFVVCNLIVDLLNAALDPRIRRHEGAHA"
misc_feature complement(294306..295247)
/locus_tag="ECBD_0264"
/note="nickel transporter permease NikB; Provisional;
Region: PRK10352"
/db_xref="CDD:182400"
sig_peptide complement(295152..295247)
/locus_tag="ECBD_0264"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.865) with cleavage site probability 0.261 at
residue 32"
misc_feature complement(294357..294956)
/locus_tag="ECBD_0264"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(294357..294362,294369..294374,
294381..294386,294390..294395,294402..294407,
294456..294461,294486..294491,294498..294509,
294528..294530,294537..294542,294582..294584,
294633..294635,294642..294647,294657..294659,
294663..294668,294675..294677,294681..294683,
294687..294692,294783..294785,294789..294794,
294801..294830,294834..294845,294876..294878,
294891..294896,294903..294908))
/locus_tag="ECBD_0264"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(294492..294509,294783..294827))
/locus_tag="ECBD_0264"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(294405..294407,294456..294458,
294465..294467,294489..294491,294705..294707,
294783..294785))
/locus_tag="ECBD_0264"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(294561..294563,294573..294578,
294594..294632))
/locus_tag="ECBD_0264"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(295247..296821)
/locus_tag="ECBD_0265"
/db_xref="GeneID:8159338"
CDS complement(295247..296821)
/locus_tag="ECBD_0265"
/inference="protein motif:TFAM:TIGR02294"
/note="TIGRFAM: nickel ABC transporter periplasmic
nickel-binding protein;
PFAM: extracellular solute-binding protein family 5;
KEGG: sfx:S4269 periplasmic binding protein for nickel"
/codon_start=1
/transl_table=11
/product="nickel ABC transporter periplasmic
nickel-binding protein"
/protein_id="YP_003034526.1"
/db_xref="GI:253771695"
/db_xref="InterPro:IPR000914"
/db_xref="InterPro:IPR011980"
/db_xref="GeneID:8159338"
/translation="MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLY
TPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFD
AEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRP
FRFIAPSQFKNHETMNGIKAPIGTGPWILQASKLNQYDVFVRNENYWGEKPAIKKITF
NVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALN
TAKAPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPRQYDP
QKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGAD
VSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADK
PLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYA
PIATEIPFEQIKPVKP"
misc_feature complement(295250..296821)
/locus_tag="ECBD_0265"
/note="ABC-type dipeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
DdpA; COG0747"
/db_xref="CDD:223818"
sig_peptide complement(296753..296821)
/locus_tag="ECBD_0265"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 23"
misc_feature complement(295274..296743)
/locus_tag="ECBD_0265"
/note="The substrate-binding component of an ABC-type
nickel import system contains the type 2 periplasmic
binding fold; Region: PBP2_NikA; cd08489"
/db_xref="CDD:173854"
misc_feature complement(order(295286..295288,295550..295552,
295562..295564,296345..296347,296456..296458,
296465..296467,296675..296677,296690..296692))
/locus_tag="ECBD_0265"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173854"
gene complement(296932..297519)
/locus_tag="ECBD_0266"
/db_xref="GeneID:8159339"
CDS complement(296932..297519)
/locus_tag="ECBD_0266"
/inference="protein motif:PFAM:PF01648"
/note="PFAM: 4'-phosphopantetheinyl transferase;
KEGG: sbo:SBO_3472 holo-(acyl carrier protein) synthase 2"
/codon_start=1
/transl_table=11
/product="holo-(acyl carrier protein) synthase 2"
/protein_id="YP_003034527.1"
/db_xref="GI:253771696"
/db_xref="InterPro:IPR008278"
/db_xref="GeneID:8159339"
/translation="MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHT
LSPLPEIIYGEQGKPAFAPEMPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWR
WLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS
LSVSHCQLENLSLAICTPTPFTLTADSVPWIDSVN"
misc_feature complement(296935..297495)
/locus_tag="ECBD_0266"
/note="holo-(acyl carrier protein) synthase 2;
Provisional; Region: PRK10351"
/db_xref="CDD:182399"
misc_feature complement(<297058..297258)
/locus_tag="ECBD_0266"
/note="4'-phosphopantetheinyl transferase superfamily;
Region: ACPS; pfam01648"
/db_xref="CDD:216625"
gene complement(297574..298623)
/locus_tag="ECBD_0267"
/db_xref="GeneID:8159340"
CDS complement(297574..298623)
/locus_tag="ECBD_0267"
/inference="protein motif:PFAM:PF01594"
/note="PFAM: protein of unknown function UPF0118"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034528.1"
/db_xref="GI:253771697"
/db_xref="InterPro:IPR002549"
/db_xref="GeneID:8159340"
/translation="METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFA
IVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELT
RKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVF
MLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELM
GVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIG
NILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKL
AILLGPGRPKSRLPG"
misc_feature complement(297592..298623)
/locus_tag="ECBD_0267"
/note="Predicted permease, member of the PurR regulon
[General function prediction only]; Region: yhhT; cl00465"
/db_xref="CDD:241882"
misc_feature complement(297637..298587)
/locus_tag="ECBD_0267"
/note="Domain of unknown function DUF20; Region: UPF0118;
pfam01594"
/db_xref="CDD:216594"
gene 298722..299972
/locus_tag="ECBD_0268"
/db_xref="GeneID:8159341"
CDS 298722..299972
/locus_tag="ECBD_0268"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: sbc:SbBS512_E3849 transporter major facilitator
family"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily transporter"
/protein_id="YP_003034529.1"
/db_xref="GI:253771698"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8159341"
/translation="MKHCCKNVVILMPEPVAEPALNGLRLNLRIVSIVMFNFASYLTI
GLPLAVLPGYVHDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADSLGPKKIVVFGLC
GCFLSGLGYLTAGLTASLPVISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIG
RVISWNGIVTYGAMAMGAPLGVVFYHWGGLQALALIIMGVALVAILLAIPRPTVKASK
GKPLPFRAVLGRVWLYGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFV
GTRLLFPNGINRIGGLNVAMICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFP
ALGVVAVKAVPQQNQGAALATYTVFMDLSLGVTGPLAGLVMSWAGVPVIYLAAAGLVA
IALLLTWRLKKRPPEHVPEAASSS"
misc_feature 298761..299957
/locus_tag="ECBD_0268"
/note="major facilitator superfamily transporter;
Provisional; Region: PRK05122"
/db_xref="CDD:235348"
misc_feature 298809..299873
/locus_tag="ECBD_0268"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(298851..298853,298860..298868,298872..298877,
298929..298931,298938..298943,298950..298952,
298962..298967,298971..298976,299136..299141,
299148..299153,299160..299165,299172..299174,
299208..299213,299220..299225,299241..299243,
299445..299447,299454..299459,299466..299471,
299478..299480,299520..299522,299532..299534,
299544..299546,299553..299555,299556..299558,
299697..299699,299706..299711,299718..299720,
299730..299735,299742..299744,299775..299780,
299787..299792,299799..299804,299811..299813)
/locus_tag="ECBD_0268"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(299976..300533)
/locus_tag="ECBD_0269"
/db_xref="GeneID:8159342"
CDS complement(299976..300533)
/locus_tag="ECBD_0269"
/inference="similar to AA sequence:KEGG:SDY_3623"
/note="KEGG: sdy:SDY_3623 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034530.1"
/db_xref="GI:253771699"
/db_xref="GeneID:8159342"
/translation="MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVN
LLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKR
LEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
ITLPADDQQKAQTTAENIINTLVIQ"
misc_feature complement(299979..300533)
/locus_tag="ECBD_0269"
/note="hypothetical protein; Provisional; Region:
PRK11615"
/db_xref="CDD:183232"
gene complement(300606..301271)
/locus_tag="ECBD_0270"
/db_xref="GeneID:8159343"
CDS complement(300606..301271)
/locus_tag="ECBD_0270"
/inference="protein motif:TFAM:TIGR00697"
/note="TIGRFAM: conserved hypothetical protein;
PFAM: protein of unknown function DUF165;
KEGG: sbc:SbBS512_E3851 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034531.1"
/db_xref="GI:253771700"
/db_xref="InterPro:IPR003744"
/db_xref="GeneID:8159343"
/translation="MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTW
GAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALA
HFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF
IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINAL
QAS"
misc_feature complement(300642..301271)
/locus_tag="ECBD_0270"
/note="hypothetical protein; Provisional; Region:
PRK11212"
/db_xref="CDD:183041"
gene 301492..301737
/locus_tag="ECBD_0271"
/db_xref="GeneID:8159344"
CDS 301492..301737
/locus_tag="ECBD_0271"
/inference="protein motif:PFAM:PF01206"
/note="TusA; transfers sulfur to TusBCD complex; involved
in thiouridation of U34 position of some tRNAs"
/codon_start=1
/transl_table=11
/product="sulfur transfer protein SirA"
/protein_id="YP_003034532.1"
/db_xref="GI:253771701"
/db_xref="InterPro:IPR001455"
/db_xref="GeneID:8159344"
/translation="MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIAD
DPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG"
misc_feature 301522..301728
/locus_tag="ECBD_0271"
/note="SirA (also known as UvrY, and YhhP) belongs to a
family of two-component response regulators that controls
secondary metabolism and virulence. The other member of
this two-component system is a sensor kinase called BarA
which phosphorylates SirA. A...; Region: SirA; cd03423"
/db_xref="CDD:239515"
misc_feature order(301525..301530,301537..301539,301546..301557,
301561..301563)
/locus_tag="ECBD_0271"
/note="CPxP motif; other site"
/db_xref="CDD:239515"
gene complement(301839..304037)
/gene="zntA"
/locus_tag="ECBD_0272"
/db_xref="GeneID:8159345"
CDS complement(301839..304037)
/gene="zntA"
/locus_tag="ECBD_0272"
/inference="protein motif:TFAM:TIGR01525"
/note="P-type ATPase involved in the export of lead,
cadmium, zinc and mercury"
/codon_start=1
/transl_table=11
/product="zinc/cadmium/mercury/lead-transporting ATPase"
/protein_id="YP_003034533.1"
/db_xref="GI:253771702"
/db_xref="InterPro:IPR000150"
/db_xref="InterPro:IPR000695"
/db_xref="InterPro:IPR001756"
/db_xref="InterPro:IPR001757"
/db_xref="InterPro:IPR001969"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006121"
/db_xref="InterPro:IPR006404"
/db_xref="InterPro:IPR006416"
/db_xref="InterPro:IPR008250"
/db_xref="GeneID:8159345"
/translation="MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSTPTLSEN
VSGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVES
ALQKAGYSLRDEQAAEEPQASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATT
LVGLYPIARQALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEG
WAASRARQGVSALMALKPETATRLRKGEREEVAINSLRPGDVIEVAAGGRLPADGKLL
SPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIE
EAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGC
PCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTA
IHPATGISESELLTLAAAVEQGATHPLAQAIVREAQVAELAIPTAESQRALVGSGIEA
QVNGERVLICAAGKHPADAFTGLINELESAGQTVVLVVRNDDVLGVIALQDTLRADAA
TAISELNALGVKGVILTGDNPRAAAAIAGELGLEFKAGLLPEDKVKAVTELNQHAPLA
MVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANI
RQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLLRRR"
misc_feature complement(301842..304037)
/gene="zntA"
/locus_tag="ECBD_0272"
/note="zinc/cadmium/mercury/lead-transporting ATPase;
Provisional; Region: zntA; PRK11033"
/db_xref="CDD:236827"
misc_feature complement(303702..303881)
/gene="zntA"
/locus_tag="ECBD_0272"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:238219"
misc_feature complement(order(303852..303854,303861..303869))
/gene="zntA"
/locus_tag="ECBD_0272"
/note="metal-binding site [ion binding]"
/db_xref="CDD:238219"
misc_feature complement(302823..303425)
/gene="zntA"
/locus_tag="ECBD_0272"
/note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
/db_xref="CDD:215733"
gene complement(304111..304737)
/locus_tag="ECBD_0273"
/db_xref="GeneID:8159346"
CDS complement(304111..304737)
/locus_tag="ECBD_0273"
/inference="protein motif:PFAM:PF07947"
/note="PFAM: YhhN family protein;
KEGG: sbc:SbBS512_E3854 hypothetical protein"
/codon_start=1
/transl_table=11
/product="YhhN family protein"
/protein_id="YP_003034534.1"
/db_xref="GI:253771703"
/db_xref="InterPro:IPR012506"
/db_xref="GeneID:8159346"
/translation="MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQ
APMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSF
FWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL"
misc_feature complement(304114..304737)
/locus_tag="ECBD_0273"
/note="Predicted membrane protein [Function unknown];
Region: COG3714"
/db_xref="CDD:226237"
gene 304878..305237
/locus_tag="ECBD_0274"
/db_xref="GeneID:8159347"
CDS 304878..305237
/locus_tag="ECBD_0274"
/inference="similar to AA sequence:KEGG:SFV_3470"
/note="KEGG: sfv:SFV_3470 receptor"
/codon_start=1
/transl_table=11
/product="receptor"
/protein_id="YP_003034535.1"
/db_xref="GI:253771704"
/db_xref="GeneID:8159347"
/translation="MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVV
VSNKREKPINDRRSRQQEVTPAGTSIRYEASFKPQSGGMEQTFRLDAQQYHALTVGDK
GTLSYKGTRFVSFVGEQ"
sig_peptide 304878..304934
/locus_tag="ECBD_0274"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.629) with cleavage site probability 0.610 at
residue 19"
misc_feature 304929..305225
/locus_tag="ECBD_0274"
/note="Protein of unknown function (DUF2500); Region:
DUF2500; pfam10694"
/db_xref="CDD:151190"
gene complement(305240..305509)
/locus_tag="ECBD_0275"
/db_xref="GeneID:8159348"
CDS complement(305240..305509)
/locus_tag="ECBD_0275"
/inference="protein motif:PFAM:PF06611"
/note="PFAM: protein of unknown function DUF1145;
KEGG: sdy:SDY_3617 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034536.1"
/db_xref="GI:253771705"
/db_xref="InterPro:IPR009525"
/db_xref="GeneID:8159348"
/translation="MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMH
GMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLAWQKKFKVKK"
misc_feature complement(305243..305509)
/locus_tag="ECBD_0275"
/note="hypothetical protein; Provisional; Region:
PRK10910"
/db_xref="CDD:182831"
gene complement(305499..306095)
/gene="rsmD"
/locus_tag="ECBD_0276"
/db_xref="GeneID:8159349"
CDS complement(305499..306095)
/gene="rsmD"
/locus_tag="ECBD_0276"
/inference="protein motif:TFAM:TIGR00095"
/note="catalyzes the methylation of 16S rRNA at position
G966"
/codon_start=1
/transl_table=11
/product="16S rRNA m(2)G966-methyltransferase"
/protein_id="YP_003034537.1"
/db_xref="GI:253771706"
/db_xref="InterPro:IPR002052"
/db_xref="InterPro:IPR004398"
/db_xref="InterPro:IPR016065"
/db_xref="GeneID:8159349"
/translation="MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLF
NWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGN
ARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV
ENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD"
misc_feature complement(305523..306029)
/gene="rsmD"
/locus_tag="ECBD_0276"
/note="N6-adenine-specific methylase [DNA replication,
recombination, and repair]; Region: COG0742"
/db_xref="CDD:223813"
misc_feature complement(305631..305927)
/gene="rsmD"
/locus_tag="ECBD_0276"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(305715..305717,305766..305774,
305847..305852,305901..305921))
/gene="rsmD"
/locus_tag="ECBD_0276"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 306245..307738
/locus_tag="ECBD_0277"
/db_xref="GeneID:8159350"
CDS 306245..307738
/locus_tag="ECBD_0277"
/inference="protein motif:TFAM:TIGR00064"
/note="signal recognition protein receptor; functions in
the targeting and insertion of membrane proteins"
/codon_start=1
/transl_table=11
/product="cell division protein FtsY"
/protein_id="YP_003034538.1"
/db_xref="GI:253771707"
/db_xref="InterPro:IPR000897"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR004390"
/db_xref="InterPro:IPR013822"
/db_xref="GeneID:8159350"
/translation="MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVQAQEP
VKASEQAVEEQPQAHTEAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPEPVVEETP
EPVAIEREELPLPEDVNAEAVSPEEWQAEAETVEIVEAAEEEAAKEEITDEELETALA
AEAAEEAVMVVPPAEEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLF
RGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMG
EILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRA
AAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSH
LMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDG
TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED"
misc_feature 306809..307735
/locus_tag="ECBD_0277"
/note="signal recognition particle-docking protein FtsY;
Provisional; Region: PRK10416"
/db_xref="CDD:236686"
misc_feature 306839..307069
/locus_tag="ECBD_0277"
/note="SRP54-type protein, helical bundle domain; Region:
SRP54_N; pfam02881"
/db_xref="CDD:217266"
misc_feature 307124..307660
/locus_tag="ECBD_0277"
/note="The signal recognition particle (SRP) mediates the
transport to or across the plasma membrane in bacteria and
the endoplasmic reticulum in eukaryotes. SRP recognizes
N-terminal sighnal sequences of newly synthesized
polypeptides at the ribosome. The...; Region: SRP;
cd03115"
/db_xref="CDD:239389"
misc_feature 307142..307165
/locus_tag="ECBD_0277"
/note="P loop; other site"
/db_xref="CDD:239389"
misc_feature order(307232..307234,307397..307399,307580..307582,
307589..307594)
/locus_tag="ECBD_0277"
/note="GTP binding site [chemical binding]; other site"
/db_xref="CDD:239389"
gene 307741..308409
/locus_tag="ECBD_0278"
/db_xref="GeneID:8159351"
CDS 307741..308409
/locus_tag="ECBD_0278"
/inference="protein motif:TFAM:TIGR00960"
/note="ATP-binding protein of an ATP-binding cassette
transporter; when bound to FtsX, FtsEX localizes to the
cell division site and plays a role in the assembly or
stability of the septal ring under low-salt growth
conditions"
/codon_start=1
/transl_table=11
/product="cell division protein FtsE"
/protein_id="YP_003034539.1"
/db_xref="GI:253771708"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005286"
/db_xref="InterPro:IPR013505"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8159351"
/translation="MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTL
LKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAI
PLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLL
ADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGG
VGHE"
misc_feature 307741..308406
/locus_tag="ECBD_0278"
/note="cell division protein FtsE; Provisional; Region:
PRK10908"
/db_xref="CDD:182829"
misc_feature 307744..308385
/locus_tag="ECBD_0278"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature 307843..307866
/locus_tag="ECBD_0278"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature order(307852..307857,307861..307869,307996..307998,
308224..308229,308323..308325)
/locus_tag="ECBD_0278"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature 307987..307998
/locus_tag="ECBD_0278"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature 308152..308181
/locus_tag="ECBD_0278"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature 308212..308229
/locus_tag="ECBD_0278"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature 308236..308247
/locus_tag="ECBD_0278"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature 308311..308331
/locus_tag="ECBD_0278"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene 308402..309460
/gene="ftsX"
/locus_tag="ECBD_0279"
/db_xref="GeneID:8159352"
CDS 308402..309460
/gene="ftsX"
/locus_tag="ECBD_0279"
/inference="protein motif:TFAM:TIGR00439"
/note="ABC transporter membrane protein"
/codon_start=1
/transl_table=11
/product="cell division protein FtsX"
/protein_id="YP_003034540.1"
/db_xref="GI:253771709"
/db_xref="InterPro:IPR003838"
/db_xref="InterPro:IPR004513"
/db_xref="GeneID:8159352"
/translation="MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKP
VNRKTNVFNEQVRYAFHGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAA
TQYYPSPQITVYLQKTLDDDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGG
ALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALT
GLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGG
ALLGFSGALLSLILSEILVLRLSSAVAEVAQVFGTKFDINGLSFDECLLLLLVCSMIG
WVAAWLATVQHLRHFTPE"
misc_feature 308531..309457
/gene="ftsX"
/locus_tag="ECBD_0279"
/note="cell division ABC transporter subunit FtsX;
Provisional; Region: ftsX; PRK11026"
/db_xref="CDD:182910"
misc_feature 308546..309457
/gene="ftsX"
/locus_tag="ECBD_0279"
/note="putative protein insertion permease FtsX; Region:
ftsX; TIGR00439"
/db_xref="CDD:129531"
gene 309705..310559
/locus_tag="ECBD_0280"
/db_xref="GeneID:8159353"
CDS 309705..310559
/locus_tag="ECBD_0280"
/inference="protein motif:TFAM:TIGR02392"
/note="binds with the catalytic core of RNA polymerase to
produce the holoenzyme; this sigma factor is responsible
for the expression of heat shock promoters"
/codon_start=1
/transl_table=11
/product="RNA polymerase factor sigma-32"
/protein_id="YP_003034541.1"
/db_xref="GI:253771710"
/db_xref="InterPro:IPR000943"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR012759"
/db_xref="InterPro:IPR014284"
/db_xref="GeneID:8159353"
/translation="MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYH
GDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLV
SFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARE
LGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWE
EQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMK
KLRAAIEA"
misc_feature 309705..310556
/locus_tag="ECBD_0280"
/note="RNA polymerase factor sigma-32; Reviewed; Region:
PRK06596"
/db_xref="CDD:235838"
misc_feature 309861..310073
/locus_tag="ECBD_0280"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:218138"
misc_feature 310371..310541
/locus_tag="ECBD_0280"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(310401..310403,310431..310433,310458..310463,
310491..310493,310497..310502,310506..310514,
310518..310523,310527..310529)
/locus_tag="ECBD_0280"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 310830..311933
/locus_tag="ECBD_0281"
/db_xref="GeneID:8159354"
CDS 310830..311933
/locus_tag="ECBD_0281"
/inference="protein motif:PFAM:PF01094"
/note="PFAM: extracellular ligand-binding receptor;
KEGG: sfv:SFV_3463 Leu/Ile/Val-binding protein precursor"
/codon_start=1
/transl_table=11
/product="extracellular ligand-binding receptor"
/protein_id="YP_003034542.1"
/db_xref="GI:253771711"
/db_xref="InterPro:IPR000709"
/db_xref="InterPro:IPR001828"
/db_xref="GeneID:8159354"
/translation="MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQ
EFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCS
SSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVK
PQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENID
FVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYD
QVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDT
VMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK"
sig_peptide 310830..310901
/locus_tag="ECBD_0281"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.998 at
residue 24"
misc_feature 310875..311912
/locus_tag="ECBD_0281"
/note="ABC-type branched-chain amino acid transport
systems, periplasmic component [Amino acid transport and
metabolism]; Region: LivK; COG0683"
/db_xref="CDD:223755"
misc_feature 310908..311900
/locus_tag="ECBD_0281"
/note="Type I periplasmic ligand-binding domain of ABC
(Atpase Binding Cassette)-type active transport systems
that are involved in the transport of all three branched
chain aliphatic amino acids (leucine, isoleucine and
valine); Region: PBP1_ABC_LIVBP_like; cd06342"
/db_xref="CDD:107337"
misc_feature order(310929..310931,310956..310958,310968..310970,
310977..310979,311529..311531,311592..311594,
311601..311603,311610..311615,311703..311705)
/locus_tag="ECBD_0281"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107337"
misc_feature order(311127..311135,311196..311201,311346..311348,
311502..311504,311574..311576)
/locus_tag="ECBD_0281"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107337"
gene complement(312121..312504)
/locus_tag="ECBD_0282"
/db_xref="GeneID:8159355"
CDS complement(312121..312504)
/locus_tag="ECBD_0282"
/inference="protein motif:PFAM:PF00583"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: sdy:SDY_3610 hypothetical protein"
/codon_start=1
/transl_table=11
/product="GCN5-related N-acetyltransferase"
/protein_id="YP_003034543.1"
/db_xref="GI:253771712"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:8159355"
/translation="MKLTIIRLEKFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARF
NERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGV
EDRGVMTAFMQALGFTAQQGGWEKC"
misc_feature complement(312130..312501)
/locus_tag="ECBD_0282"
/note="Acetyltransferase (GNAT) domain; Region: DUF3749;
pfam12568"
/db_xref="CDD:204966"
gene 312928..314037
/locus_tag="ECBD_0283"
/db_xref="GeneID:8159356"
CDS 312928..314037
/locus_tag="ECBD_0283"
/inference="protein motif:PFAM:PF01094"
/note="PFAM: extracellular ligand-binding receptor;
KEGG: sbc:SbBS512_E3864 high-affinity branched-chain amino
acid ABC transporter periplasmic leucine-specific-binding
protein LivK"
/codon_start=1
/transl_table=11
/product="extracellular ligand-binding receptor"
/protein_id="YP_003034544.1"
/db_xref="GI:253771713"
/db_xref="InterPro:IPR000709"
/db_xref="InterPro:IPR001828"
/db_xref="GeneID:8159356"
/translation="MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDM
EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCS
SSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK
PQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENID
FVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD
QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGA
NTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK"
sig_peptide 312928..312999
/locus_tag="ECBD_0283"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 24"
misc_feature 312973..314016
/locus_tag="ECBD_0283"
/note="ABC-type branched-chain amino acid transport
systems, periplasmic component [Amino acid transport and
metabolism]; Region: LivK; COG0683"
/db_xref="CDD:223755"
misc_feature 313006..314004
/locus_tag="ECBD_0283"
/note="Type I periplasmic ligand-binding domain of ABC
(Atpase Binding Cassette)-type active transport systems
that are involved in the transport of all three branched
chain aliphatic amino acids (leucine, isoleucine and
valine); Region: PBP1_ABC_LIVBP_like; cd06342"
/db_xref="CDD:107337"
misc_feature order(313027..313029,313054..313056,313066..313068,
313075..313077,313627..313629,313690..313692,
313699..313701,313708..313713,313801..313803)
/locus_tag="ECBD_0283"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107337"
misc_feature order(313225..313233,313294..313299,313444..313446,
313600..313602,313672..313674)
/locus_tag="ECBD_0283"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107337"
gene 314085..315011
/locus_tag="ECBD_0284"
/db_xref="GeneID:8159357"
CDS 314085..315011
/locus_tag="ECBD_0284"
/inference="protein motif:PFAM:PF02653"
/note="LivHMGF is the membrane component of the LIV-I/LS
branched-chain amino acid transporter"
/codon_start=1
/transl_table=11
/product="branched-chain amino acid transporter permease
subunit LivH"
/protein_id="YP_003034545.1"
/db_xref="GI:253771714"
/db_xref="InterPro:IPR001851"
/db_xref="GeneID:8159357"
/translation="MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHG
EVYMIGSYVSFMIIAALMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNS
KRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVI
WIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAV
AGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLS
TEYKDVVSFALLILVLLVMPTGILGRPEVEKV"
misc_feature 314115..314960
/locus_tag="ECBD_0284"
/note="Branched-chain amino acid transport system /
permease component; Region: BPD_transp_2; pfam02653"
/db_xref="CDD:217165"
misc_feature 314127..314984
/locus_tag="ECBD_0284"
/note="Transmembrane subunit (TM) of Escherichia coli LivH
and related proteins. LivH is one of two TMs of the E.
coli LIV-1/LS transporter, a Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette (ABC) transporter
involved in the uptake of...; Region: TM_PBP1_LivH_like;
cd06582"
/db_xref="CDD:119324"
misc_feature 314658..314714
/locus_tag="ECBD_0284"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119324"
gene 315008..316285
/gene="livM"
/locus_tag="ECBD_0285"
/db_xref="GeneID:8159358"
CDS 315008..316285
/gene="livM"
/locus_tag="ECBD_0285"
/inference="protein motif:PFAM:PF02653"
/note="Part of the ABC transporter complex LivFGHMJ and
LivFGHMK involved in the high-affinity transport of
branched-chain amino acids; LivFGHMK is specific for the
transport of leucine, while LivFGHMJ is a transporter for
leucine, isoleucine, and valine"
/codon_start=1
/transl_table=11
/product="leucine/isoleucine/valine transporter permease
subunit"
/protein_id="YP_003034546.1"
/db_xref="GI:253771715"
/db_xref="InterPro:IPR001851"
/db_xref="GeneID:8159358"
/translation="MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDVR
WQWVFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVA
WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
GLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGG
PNGISQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSL
FVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQ
GFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGG
LMVLMMIWRPQGLLPMTRPQLKLKNGAAKGEQA"
misc_feature 315008..316264
/gene="livM"
/locus_tag="ECBD_0285"
/note="leucine/isoleucine/valine transporter permease
subunit; Provisional; Region: livM; PRK11301"
/db_xref="CDD:236896"
sig_peptide 315008..315070
/gene="livM"
/locus_tag="ECBD_0285"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.989 at
residue 21"
misc_feature 315011..315283
/gene="livM"
/locus_tag="ECBD_0285"
/note="Domain of unknown function (DUF3382); Region:
DUF3382; pfam11862"
/db_xref="CDD:221276"
misc_feature 315440..316228
/gene="livM"
/locus_tag="ECBD_0285"
/note="Transmembrane subunit (TM) of Escherichia coli LivM
and related proteins. LivM is one of two TMs of the E.
coli LIV-1/LS transporter, a Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette (ABC) transporter
involved in the uptake of...; Region: TM_PBP1_LivM_like;
cd06581"
/db_xref="CDD:119323"
misc_feature 315902..315958
/gene="livM"
/locus_tag="ECBD_0285"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119323"
gene 316282..317049
/gene="livG"
/locus_tag="ECBD_0286"
/db_xref="GeneID:8159359"
CDS 316282..317049
/gene="livG"
/locus_tag="ECBD_0286"
/inference="protein motif:PFAM:PF00005"
/note="Part of the ABC transporter complexes LivFGHMJ and
LivFGHMK involved in the high-affinity transport of
branched-chain amino acids; LivFGHMK is specific for the
transport of leucine, while LivFGHMJ is a transporter for
leucine, isoleucine, and valine"
/codon_start=1
/transl_table=11
/product="leucine/isoleucine/valine transporter
ATP-binding subunit"
/protein_id="YP_003034547.1"
/db_xref="GI:253771716"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8159359"
/translation="MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGK
TTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLL
VAQHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQR
RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVM
GISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYLGEA"
misc_feature 316282..317046
/gene="livG"
/locus_tag="ECBD_0286"
/note="leucine/isoleucine/valine transporter ATP-binding
subunit; Provisional; Region: livG; PRK11300"
/db_xref="CDD:183080"
misc_feature 316297..317022
/gene="livG"
/locus_tag="ECBD_0286"
/note="ATP-binding cassette component of branched chain
amino acids transport system; Region:
ABC_Mj1267_LivG_branched; cd03219"
/db_xref="CDD:213186"
misc_feature 316393..316416
/gene="livG"
/locus_tag="ECBD_0286"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213186"
misc_feature order(316402..316407,316411..316419,316540..316542,
316813..316818,316915..316917)
/gene="livG"
/locus_tag="ECBD_0286"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213186"
misc_feature 316531..316542
/gene="livG"
/locus_tag="ECBD_0286"
/note="Q-loop/lid; other site"
/db_xref="CDD:213186"
misc_feature 316741..316770
/gene="livG"
/locus_tag="ECBD_0286"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213186"
misc_feature 316801..316818
/gene="livG"
/locus_tag="ECBD_0286"
/note="Walker B; other site"
/db_xref="CDD:213186"
misc_feature 316825..316836
/gene="livG"
/locus_tag="ECBD_0286"
/note="D-loop; other site"
/db_xref="CDD:213186"
misc_feature 316903..316923
/gene="livG"
/locus_tag="ECBD_0286"
/note="H-loop/switch region; other site"
/db_xref="CDD:213186"
gene 317051..317764
/gene="livF"
/locus_tag="ECBD_0287"
/db_xref="GeneID:8159360"
CDS 317051..317764
/gene="livF"
/locus_tag="ECBD_0287"
/inference="protein motif:PFAM:PF00005"
/note="with LivGHMJ and LivGHMK is part of the
high-affinity branched-chain amino acid transporter;
LivFGHMK is specific for the transport of leucine, while
LivFGHMJ is a transporter for leucine, isoleucine, and
valine"
/codon_start=1
/transl_table=11
/product="leucine/isoleucine/valine transporter
ATP-binding subunit"
/protein_id="YP_003034548.1"
/db_xref="GI:253771717"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8159360"
/translation="MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGK
TTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLA
MGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLL
LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLS
DTGDALLANEAVRSAYLGG"
misc_feature 317051..317761
/gene="livF"
/locus_tag="ECBD_0287"
/note="leucine/isoleucine/valine transporter ATP-binding
subunit; Provisional; Region: livF; PRK11614"
/db_xref="CDD:183231"
misc_feature 317066..317731
/gene="livF"
/locus_tag="ECBD_0287"
/note="ATP-binding cassette domain of branched-chain amino
acid transporter; Region: ABC_TM1139_LivF_branched;
cd03224"
/db_xref="CDD:213191"
misc_feature 317162..317185
/gene="livF"
/locus_tag="ECBD_0287"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213191"
misc_feature order(317171..317176,317180..317188,317309..317311,
317534..317539,317633..317635)
/gene="livF"
/locus_tag="ECBD_0287"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213191"
misc_feature 317300..317311
/gene="livF"
/locus_tag="ECBD_0287"
/note="Q-loop/lid; other site"
/db_xref="CDD:213191"
misc_feature 317462..317491
/gene="livF"
/locus_tag="ECBD_0287"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213191"
misc_feature 317522..317539
/gene="livF"
/locus_tag="ECBD_0287"
/note="Walker B; other site"
/db_xref="CDD:213191"
misc_feature 317546..317557
/gene="livF"
/locus_tag="ECBD_0287"
/note="D-loop; other site"
/db_xref="CDD:213191"
misc_feature 317621..317641
/gene="livF"
/locus_tag="ECBD_0287"
/note="H-loop/switch region; other site"
/db_xref="CDD:213191"
gene 318163..319479
/locus_tag="ECBD_0288"
/db_xref="GeneID:8159361"
CDS 318163..319479
/locus_tag="ECBD_0288"
/inference="protein motif:PFAM:PF01547"
/note="with UgpACE is involved in the uptake of
glycerol-3-phosphate"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate transporter periplasmic
binding protein"
/protein_id="YP_003034549.1"
/db_xref="GI:253771718"
/db_xref="InterPro:IPR006059"
/db_xref="InterPro:IPR006061"
/db_xref="GeneID:8159361"
/translation="MKPLHYTASALALGLALMGNAQAVTTIPFWHSMEGELGKEVDSL
AQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIK
PVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGL
DPEQPPKTWQDLADYAAKLKASGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDG
TDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLAN
IREYAKFNYGVGMMPYDADAKDAPQNAIIGGASLWVMQGKDKETYTGVAKFLDFLAKP
ENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADTATRQMLNKPPLPFTKGLRLGN
MPQIRVIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKSTKS"
sig_peptide 318163..318234
/locus_tag="ECBD_0288"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.997 at
residue 24"
misc_feature 318232..319473
/locus_tag="ECBD_0288"
/note="glycerol-3-phosphate transporter periplasmic
binding protein; Provisional; Region: PRK10974"
/db_xref="CDD:182876"
misc_feature 318235..319458
/locus_tag="ECBD_0288"
/note="ABC-type sugar transport system, periplasmic
component [Carbohydrate transport and metabolism]; Region:
UgpB; COG1653"
/db_xref="CDD:224567"
gene 319577..320464
/locus_tag="ECBD_0289"
/db_xref="GeneID:8159362"
CDS 319577..320464
/locus_tag="ECBD_0289"
/inference="protein motif:PFAM:PF00528"
/note="with UgpEC is involved in the uptake of
glycerol-3-phosphate"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate transporter permease"
/protein_id="YP_003034550.1"
/db_xref="GI:253771719"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8159362"
/translation="MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSV
DPFGFSSQFVGLDNFVTLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVR
GSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFL
VVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFL
LVMNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFL
VIVLTVVQFRYVESKVRYQ"
misc_feature 319598..320413
/locus_tag="ECBD_0289"
/note="ABC-type polysaccharide transport system, permease
component [Carbohydrate transport and metabolism]; Region:
LplB; COG4209"
/db_xref="CDD:226666"
misc_feature 319790..320410
/locus_tag="ECBD_0289"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(319838..319843,319850..319855,319865..319867,
319895..319906,319910..319939,319946..319951,
319955..319957,320072..320077,320084..320086,
320090..320092,320099..320104,320108..320110,
320120..320125,320132..320134,320183..320185,
320225..320230,320237..320239,320258..320269,
320285..320290,320327..320332,320360..320365,
320372..320377,320381..320386,320393..320398,
320405..320410)
/locus_tag="ECBD_0289"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(319913..319957,320258..320275)
/locus_tag="ECBD_0289"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(319955..319957,320057..320059,320285..320287,
320321..320323,320330..320332,320360..320362)
/locus_tag="ECBD_0289"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(320135..320173,320189..320194,320204..320206)
/locus_tag="ECBD_0289"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 320461..321306
/locus_tag="ECBD_0290"
/db_xref="GeneID:8159363"
CDS 320461..321306
/locus_tag="ECBD_0290"
/inference="protein motif:PFAM:PF00528"
/note="with UgpABC is involved in uptake of
glycerol-3-phosphate"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate transporter membrane
protein"
/protein_id="YP_003034551.1"
/db_xref="GI:253771720"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8159363"
/translation="MIENRPWLTIFSHTMLILGIAVILFPLYVAFVAATLDKQAVYAA
PMTLIPGTHLLENIHNIWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAI
VWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLQMLDSYAGLTLPLMASATATF
LFRQFFMTLPDELVEAARIDGASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWP
LLIITDVDLGTTVAGIKGMIATGEGTTEWNSVMVAMLLTLIPPVVIVLVMQRAFVRGL
VDSEK"
misc_feature 320473..321291
/locus_tag="ECBD_0290"
/note="ABC-type sugar transport system, permease component
[Carbohydrate transport and metabolism]; Region: UgpE;
COG0395"
/db_xref="CDD:223472"
misc_feature 320689..321153
/locus_tag="ECBD_0290"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(320737..320742,320749..320754,320767..320769,
320797..320808,320812..320841,320848..320853,
320857..320859,320914..320919,320923..320925,
320929..320931,320938..320943,320947..320949,
320959..320964,320971..320973,321022..321024,
321064..321069,321076..321078,321097..321108,
321115..321120)
/locus_tag="ECBD_0290"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(320815..320859,321097..321114)
/locus_tag="ECBD_0290"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(320857..320859,321115..321117,321151..321153)
/locus_tag="ECBD_0290"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(320974..321012,321028..321033,321043..321045)
/locus_tag="ECBD_0290"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 321308..322378
/gene="ugpC"
/locus_tag="ECBD_0291"
/db_xref="GeneID:8159364"
CDS 321308..322378
/gene="ugpC"
/locus_tag="ECBD_0291"
/inference="protein motif:PFAM:PF00005"
/note="part of the UgpABCE glycerol-3-phosphate uptake
system"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate transporter ATP-binding
subunit"
/protein_id="YP_003034552.1"
/db_xref="GI:253771721"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013611"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8159364"
/translation="MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKS
TLLRMVAGLERVTEGDIWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLK
IRGMGKQQIAERVKEAARILELDGLLKRRSRELSGGQRQRVAMGRAIVRDPAVFLFDE
PLSNLDAKLRVQMRLELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGT
PVEVYEKPASLFVASFIGSPAMNLLTGRVNNEGTHFELDGGIELPLNGGYRQYAGRKM
TLGIRPEHIALSSQAEGGVPMVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGS
TLWLHLAENQLHLFDGETGQRV"
misc_feature 321308..322375
/gene="ugpC"
/locus_tag="ECBD_0291"
/note="glycerol-3-phosphate transporter ATP-binding
subunit; Provisional; Region: ugpC; PRK11650"
/db_xref="CDD:236947"
misc_feature 321317..321958
/gene="ugpC"
/locus_tag="ECBD_0291"
/note="The N-terminal ATPase domain of the maltose
transporter, MalK; Region: ABC_MalK_N; cd03301"
/db_xref="CDD:213268"
misc_feature 321416..321439
/gene="ugpC"
/locus_tag="ECBD_0291"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213268"
misc_feature order(321425..321430,321434..321442,321554..321556,
321782..321787,321884..321886)
/gene="ugpC"
/locus_tag="ECBD_0291"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213268"
misc_feature 321545..321556
/gene="ugpC"
/locus_tag="ECBD_0291"
/note="Q-loop/lid; other site"
/db_xref="CDD:213268"
misc_feature 321710..321739
/gene="ugpC"
/locus_tag="ECBD_0291"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213268"
misc_feature 321770..321787
/gene="ugpC"
/locus_tag="ECBD_0291"
/note="Walker B; other site"
/db_xref="CDD:213268"
misc_feature 321794..321805
/gene="ugpC"
/locus_tag="ECBD_0291"
/note="D-loop; other site"
/db_xref="CDD:213268"
misc_feature 321872..321892
/gene="ugpC"
/locus_tag="ECBD_0291"
/note="H-loop/switch region; other site"
/db_xref="CDD:213268"
misc_feature 322139..322351
/gene="ugpC"
/locus_tag="ECBD_0291"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:219823"
gene 322375..323118
/gene="ugpQ"
/locus_tag="ECBD_0292"
/db_xref="GeneID:8159365"
CDS 322375..323118
/gene="ugpQ"
/locus_tag="ECBD_0292"
/inference="protein motif:PFAM:PF03009"
/note="hydrolyzes diesters during transport at the inner
face of the cytoplasmic membrane to glycerol-3-phosphate
and alcohol; induced when cells are starved for inorganic
phosphate"
/codon_start=1
/transl_table=11
/product="cytoplasmic glycerophosphodiester
phosphodiesterase"
/protein_id="YP_003034553.1"
/db_xref="GI:253771722"
/db_xref="InterPro:IPR004129"
/db_xref="GeneID:8159365"
/translation="MSNWPYPRIVAHRGGGKLAPENTLASIDVGAKYGHKMIEFDAKL
SKDGEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGSWYSKMFKGEPLPLLSQVAE
RCREHGMMANIEIKPTTGTGPLTGKMVALAARELWAGMTPPLLSSFEIDALEAAQQAA
PELPRGLLLDEWRDDWRELTARLGCVSIHLNHKLFNKARVMQLKDAGLRILVYTVNKP
QRAAELLRWGVDCICTDAIDVIGPNFTAQ"
misc_feature 322375..323115
/gene="ugpQ"
/locus_tag="ECBD_0292"
/note="cytoplasmic glycerophosphodiester
phosphodiesterase; Provisional; Region: ugpQ; PRK09454"
/db_xref="CDD:236524"
misc_feature 322399..323079
/gene="ugpQ"
/locus_tag="ECBD_0292"
/note="Glycerophosphodiester phosphodiesterase domain in
Escherichia coli cytosolic glycerophosphodiester
phosphodiesterase UgpQ and similar proteins; Region:
GDPD_EcUgpQ_like; cd08562"
/db_xref="CDD:176505"
misc_feature order(322408..322410,322489..322491,322495..322497,
322534..322536,322714..322716,322810..322812,
323011..323013)
/gene="ugpQ"
/locus_tag="ECBD_0292"
/note="putative active site [active]"
/db_xref="CDD:176505"
misc_feature order(322408..322410,322534..322536)
/gene="ugpQ"
/locus_tag="ECBD_0292"
/note="catalytic site [active]"
/db_xref="CDD:176505"
misc_feature order(322489..322491,322495..322497,322714..322716)
/gene="ugpQ"
/locus_tag="ECBD_0292"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:176505"
gene complement(323105..323545)
/locus_tag="ECBD_0293"
/db_xref="GeneID:8159366"
CDS complement(323105..323545)
/locus_tag="ECBD_0293"
/inference="similar to AA sequence:KEGG:SF3465"
/note="KEGG: sfl:SF3465 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034554.1"
/db_xref="GI:253771723"
/db_xref="GeneID:8159366"
/translation="MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQ
TQQIQQKGMLNQQLKTQTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGG
MLNSNRNPDSSLNQQHMLPERRNGDMLNQPSTPQPDIPLKTIGP"
misc_feature complement(323108..323545)
/locus_tag="ECBD_0293"
/note="hypothetical protein; Provisional; Region:
PRK10350"
/db_xref="CDD:182398"
sig_peptide complement(323492..323545)
/locus_tag="ECBD_0293"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.998) with cleavage site probability 0.958 at
residue 18"
gene 323665..325407
/gene="ggt"
/locus_tag="ECBD_0294"
/db_xref="GeneID:8159367"
CDS 323665..325407
/gene="ggt"
/locus_tag="ECBD_0294"
/EC_number="2.3.2.2"
/inference="protein motif:TFAM:TIGR00066"
/note="periplasmic enzyme; post-translationally processed
into two subunits which are required for wild-type enzyme
activity; cleaves the gammaglutamyl linkages of compounds
such as glutathione and transfer the gammaglutamyl group
to other amino acids and peptides"
/codon_start=1
/transl_table=11
/product="gamma-glutamyltranspeptidase"
/protein_id="YP_003034555.1"
/db_xref="GI:253771724"
/db_xref="InterPro:IPR000101"
/db_xref="GeneID:8159367"
/translation="MIKPTFLRRVAIAALLSGSCFSAAAAPPAPPVSYGVEEDVFHPV
RAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIR
SKNGNTTAIDFREMAPAKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDK
YGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVLPNHENSKAIFWKEGEPLKK
GDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERT
PISGDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAY
ADRSEYLGDPDFVKVPWQALTNKAYAKSIADQIDINKAKPSSEIRPGKLAPYESNQTT
HYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSVKPGVPNVYGLVGGD
ANAVGPNKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGLNVAEA
TNAPRFHHQWLPDELRVEKGFSPDTLKLLEAKGQKVALKEAMGSTQSIMVGPDGELYG
ASDPRSVDDLTAGY"
misc_feature 323665..325404
/gene="ggt"
/locus_tag="ECBD_0294"
/note="gamma-glutamyltranspeptidase; Reviewed; Region:
ggt; PRK09615"
/db_xref="CDD:181992"
sig_peptide 323665..323742
/gene="ggt"
/locus_tag="ECBD_0294"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.976 at
residue 26"
misc_feature 323809..325377
/gene="ggt"
/locus_tag="ECBD_0294"
/note="gamma-glutamyltranspeptidase; Region: g_glut_trans;
TIGR00066"
/db_xref="CDD:129176"
gene complement(325445..325729)
/locus_tag="ECBD_0295"
/db_xref="GeneID:8159368"
CDS complement(325445..325729)
/locus_tag="ECBD_0295"
/inference="similar to AA sequence:KEGG:SbBS512_E3877"
/note="KEGG: sbc:SbBS512_E3877 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034556.1"
/db_xref="GI:253771725"
/db_xref="GeneID:8159368"
/translation="MITYHDAFAKANHYLDDADLPVVITLHGRFSQGWYFCFEAREFL
ETGDEAARLAGNAPFIIDKDSGEIHSLGTAKPLEEYLQDYEIKKATFGLP"
gene complement(325929..326084)
/locus_tag="ECBD_0296"
/db_xref="GeneID:8159369"
CDS complement(325929..326084)
/locus_tag="ECBD_0296"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034557.1"
/db_xref="GI:253771726"
/db_xref="GeneID:8159369"
/translation="MEKLTTELHSLSEMDRRHVVSILAEIANGYDDFNDMLIYLEFYP
NHKILIS"
gene complement(326308..326727)
/locus_tag="ECBD_0297"
/pseudo
/db_xref="GeneID:8159370"
gene complement(326730..327005)
/locus_tag="ECBD_0298"
/db_xref="GeneID:8159371"
CDS complement(326730..327005)
/locus_tag="ECBD_0298"
/inference="protein motif:PFAM:PF03811"
/note="PFAM: Insertion element protein;
KEGG: hdu:HD1971 insertion element IS1 1/2/3/5/6 protein
InsA"
/codon_start=1
/transl_table=11
/product="Insertion element protein"
/protein_id="YP_003034558.1"
/db_xref="GI:253771727"
/db_xref="InterPro:IPR003220"
/db_xref="GeneID:8159371"
/translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR"
misc_feature complement(326733..327005)
/locus_tag="ECBD_0298"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3677"
/db_xref="CDD:226202"
misc_feature complement(326898..327005)
/locus_tag="ECBD_0298"
/note="InsA N-terminal domain; Region: Zn_Tnp_IS1;
pfam03811"
/db_xref="CDD:190760"
misc_feature complement(326742..326891)
/locus_tag="ECBD_0298"
/note="InsA C-terminal domain; Region: HTH_Tnp_IS1;
pfam12759"
/db_xref="CDD:193235"
gene complement(327034..327450)
/locus_tag="ECBD_0299"
/db_xref="GeneID:8159372"
CDS complement(327034..327450)
/locus_tag="ECBD_0299"
/inference="similar to AA sequence:KEGG:LF82_3698"
/note="KEGG: elf:LF82_3698 uncharacterized protein YrhA"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034559.1"
/db_xref="GI:253771728"
/db_xref="GeneID:8159372"
/translation="MMTKTQINKLIKMMNDLDYPFEAPLKESFIESIIQIEFNSNSTN
CLEKLCNEVSILFKNQPDYLTFLRAMDGFEVNGLRLFSLSIPEPSVKNLFAVNEFYRN
NDDFINPDLQERLVIGDYSISIFTYDIKGDAANLLI"
gene complement(327447..328625)
/locus_tag="ECBD_0300"
/db_xref="GeneID:8159373"
CDS complement(327447..328625)
/locus_tag="ECBD_0300"
/inference="protein motif:TFAM:TIGR03344"
/note="TIGRFAM: type VI secretion system effector, Hcp1
family;
PFAM: protein of unknown function DUF796; HNH
endonuclease;
KEGG: sbc:SbBS512_E3883 HNH endonuclease domain protein"
/codon_start=1
/transl_table=11
/product="type VI secretion system effector, Hcp1 family"
/protein_id="YP_003034560.1"
/db_xref="GI:253771729"
/db_xref="InterPro:IPR002711"
/db_xref="InterPro:IPR008514"
/db_xref="InterPro:IPR017728"
/db_xref="GeneID:8159373"
/translation="MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSL
LNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYY
YIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFL
PNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEK
TAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLA
NLRKEFNKTVRKNFLIKLAKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGT
NDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPPMKNIMDHTK
"
misc_feature complement(328137..328625)
/locus_tag="ECBD_0300"
/note="Type VI protein secretion system component Hcp
(secreted cytotoxin) [Intracellular trafficking,
secretion, and vesicular transport]; Region: Hcp;
COG3157"
/db_xref="CDD:225699"
gene complement(328862..329350)
/locus_tag="ECBD_0301"
/db_xref="GeneID:8159374"
CDS complement(328862..329350)
/locus_tag="ECBD_0301"
/inference="protein motif:PFAM:PF00583"
/note="YhhY; regulated by the fur regulator; unknown
function"
/codon_start=1
/transl_table=11
/product="acetyltransferase YhhY"
/protein_id="YP_003034561.1"
/db_xref="GI:253771730"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:8159374"
/translation="MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQER
LADRPGIKQLVACIDEDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMRE
MIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMAR
VK"
misc_feature complement(328865..329350)
/locus_tag="ECBD_0301"
/note="putative acetyltransferase YhhY; Provisional;
Region: PRK10140"
/db_xref="CDD:182263"
misc_feature complement(328994..329191)
/locus_tag="ECBD_0301"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature complement(order(329060..329065,329093..329101))
/locus_tag="ECBD_0301"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 329683..330720
/locus_tag="ECBD_0302"
/db_xref="GeneID:8159375"
CDS 329683..330720
/locus_tag="ECBD_0302"
/inference="protein motif:PFAM:PF01408"
/note="PFAM: oxidoreductase domain protein; oxidoreductase
domain"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="YP_003034562.1"
/db_xref="GI:253771731"
/db_xref="InterPro:IPR000683"
/db_xref="InterPro:IPR004104"
/db_xref="GeneID:8159375"
/translation="MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ
APIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTL
AQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVA
ETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGD
LKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGV
LEYVNDEGVTVREEMKPEMGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFE
QASPSTVTLAK"
misc_feature 329686..330717
/locus_tag="ECBD_0302"
/note="putative oxidoreductase; Provisional; Region:
PRK10206"
/db_xref="CDD:182305"
misc_feature 329689..330042
/locus_tag="ECBD_0302"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature 330085..330399
/locus_tag="ECBD_0302"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; pfam02894"
/db_xref="CDD:217272"
gene 330843..331538
/locus_tag="ECBD_0303"
/db_xref="GeneID:8159376"
CDS 330843..331538
/locus_tag="ECBD_0303"
/inference="protein motif:PFAM:PF02678"
/note="PFAM: pirin; Cupin 2 conserved barrel domain
protein;
KEGG: sbc:SbBS512_E3886 pirin family protein"
/codon_start=1
/transl_table=11
/product="pirin"
/protein_id="YP_003034563.1"
/db_xref="GI:253771732"
/db_xref="InterPro:IPR003829"
/db_xref="InterPro:IPR013096"
/db_xref="GeneID:8159376"
/translation="MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVIN
DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHS
EYNPSSTERLHLYQIWIMPEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDM
ELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKVSTSDGLAIWDEQAISIHAD
SDSEVLLFDLPPV"
misc_feature 330843..331535
/locus_tag="ECBD_0303"
/note="Pirin-related protein [General function prediction
only]; Region: COG1741"
/db_xref="CDD:224655"
misc_feature 330852..331199
/locus_tag="ECBD_0303"
/note="Pirin; Region: Pirin; pfam02678"
/db_xref="CDD:217181"
gene complement(331535..331684)
/locus_tag="ECBD_0304"
/db_xref="GeneID:8159377"
CDS complement(331535..331684)
/locus_tag="ECBD_0304"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034564.1"
/db_xref="GI:253771733"
/db_xref="GeneID:8159377"
/translation="MFTIIRYTLNQLHRIVLTTRQNPGSVHQHATGASEEACKKAGFK
DAVEF"
gene 331762..332757
/locus_tag="ECBD_0305"
/db_xref="GeneID:8159378"
CDS 331762..332757
/locus_tag="ECBD_0305"
/inference="protein motif:PFAM:PF00532"
/note="PFAM: periplasmic binding protein/LacI
transcriptional regulator; regulatory protein LacI;
SMART: regulatory protein LacI;
KEGG: efe:EFER_3414 DNA-binding transcriptional repressor"
/codon_start=1
/transl_table=11
/product="LacI family transcriptional regulator"
/protein_id="YP_003034565.1"
/db_xref="GI:253771734"
/db_xref="InterPro:IPR000843"
/db_xref="InterPro:IPR001761"
/db_xref="GeneID:8159378"
/translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAAL
DELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYG
YKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSKSPCLDIAV
GFDNFEAARQMTTAIIARGHRHIAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVE
QSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHG
HDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGESVTPKMLDLGFTLSPGGSI"
misc_feature 331762..332754
/locus_tag="ECBD_0305"
/note="gluconate operon transcriptional regulator;
Provisional; Region: PRK14987"
/db_xref="CDD:184949"
misc_feature 331786..331923
/locus_tag="ECBD_0305"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature order(331786..331788,331810..331824,331828..331833,
331840..331842,331855..331860,331867..331869,
331906..331908,331915..331917)
/locus_tag="ECBD_0305"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature 331906..331923
/locus_tag="ECBD_0305"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature 331957..332751
/locus_tag="ECBD_0305"
/note="Ligand-binding domain of DNA transcription
repressor GntR specific for gluconate, a member of the
LacI-GalR family of bacterial transcription regulators;
Region: PBP1_GntR; cd01575"
/db_xref="CDD:107260"
misc_feature order(331990..331995,332002..332004,332137..332139,
332206..332208,332245..332247,332350..332352,
332422..332424,332584..332586,332635..332637)
/locus_tag="ECBD_0305"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107260"
misc_feature order(331993..332001,332008..332013,332017..332022,
332041..332055,332059..332061,332092..332094,
332101..332103,332110..332118,332431..332433,
332515..332517,332527..332529,332536..332541)
/locus_tag="ECBD_0305"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:107260"
gene 332935..333423
/gene="gntK"
/locus_tag="ECBD_0306"
/db_xref="GeneID:8159379"
CDS 332935..333423
/gene="gntK"
/locus_tag="ECBD_0306"
/EC_number="2.7.1.12"
/inference="protein motif:TFAM:TIGR01313"
/note="thermoresistant; catalyzes the formation of
6-phospho-D-gluconate from gluconate"
/codon_start=1
/transl_table=11
/product="gluconate kinase 1"
/protein_id="YP_003034566.1"
/db_xref="GI:253771735"
/db_xref="InterPro:IPR000623"
/db_xref="InterPro:IPR006001"
/db_xref="GeneID:8159379"
/translation="MGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPL
NDDDRKPWLQALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFD
VIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIEVIKK
GK"
misc_feature 332983..333363
/gene="gntK"
/locus_tag="ECBD_0306"
/note="Gluconate kinase (GntK) catalyzes the phosphoryl
transfer from ATP to gluconate. The resulting product
gluconate-6-phoshate is an important precursor of
gluconate metabolism. GntK acts as a dimmer composed of
two identical subunits; Region: GntK; cd02021"
/db_xref="CDD:238979"
misc_feature 332986..333411
/gene="gntK"
/locus_tag="ECBD_0306"
/note="Shikimate kinase; Region: SKI; pfam01202"
/db_xref="CDD:216360"
gene 333427..334767
/locus_tag="ECBD_0307"
/db_xref="GeneID:8159380"
CDS 333427..334767
/locus_tag="ECBD_0307"
/inference="protein motif:TFAM:TIGR00791"
/note="TIGRFAM: gluconate transporter;
PFAM: gluconate transporter; citrate transporter;
KEGG: sdy:SDY_3587 gluconate transporter low affinity GNT
1 system"
/codon_start=1
/transl_table=11
/product="low affinity gluconate transporter"
/protein_id="YP_003034567.1"
/db_xref="GI:253771736"
/db_xref="InterPro:IPR003474"
/db_xref="InterPro:IPR004680"
/db_xref="GeneID:8159380"
/translation="MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSG
MPLDKIAATMEKGMGGTLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAH
YAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVP
GPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHL
GEGKMPSFGFSLSLILLPLVLVGLKTIAARFAPEGSTAYEWFEFIGHPFTAILVACLV
AIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALT
GMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAG
GSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIAFQLLS"
misc_feature 333427..334761
/locus_tag="ECBD_0307"
/note="low affinity gluconate transporter; Provisional;
Region: PRK10472"
/db_xref="CDD:182485"
sig_peptide 333427..333498
/locus_tag="ECBD_0307"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.680) with cleavage site probability 0.506 at
residue 24"
misc_feature 333436..334761
/locus_tag="ECBD_0307"
/note="gluconate transporter; Region: gntP; TIGR00791"
/db_xref="CDD:129873"
gene complement(334824..335417)
/locus_tag="ECBD_0308"
/db_xref="GeneID:8159381"
CDS complement(334824..335417)
/locus_tag="ECBD_0308"
/inference="protein motif:PFAM:PF01914"
/note="YhgN; Ec0197; hydrolyzes nucleoside triphosphates
with an O6 atom-containing purine base to nucleoside
monophosphate and pyrophosphate; seems to play a role in
the elimination of aberrant purine-derived nucleotides
containing the 6-keto group; shows preference for
deoxyinosine triphosphate and xanthosine triphosphate over
standard nucleoside triphosphates (dATP, dCTP, dGTP, and
dTTP)"
/codon_start=1
/transl_table=11
/product="dITP- and XTP- hydrolase"
/protein_id="YP_003034568.1"
/db_xref="GI:253771737"
/db_xref="InterPro:IPR002771"
/db_xref="GeneID:8159381"
/translation="MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVREL
LIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAG
EEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFL
RLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG"
misc_feature complement(334827..335417)
/locus_tag="ECBD_0308"
/note="putative antibiotic transporter; Provisional;
Region: PRK10739"
/db_xref="CDD:170674"
gene 335610..336713
/locus_tag="ECBD_0309"
/db_xref="GeneID:8159382"
CDS 335610..336713
/locus_tag="ECBD_0309"
/EC_number="1.2.1.11"
/inference="protein motif:TFAM:TIGR01745"
/note="catalyzes the formation of 4-aspartyl phosphate
from aspartate 4-semialdehyde"
/codon_start=1
/transl_table=11
/product="aspartate-semialdehyde dehydrogenase"
/protein_id="YP_003034569.1"
/db_xref="GI:253771738"
/db_xref="InterPro:IPR000319"
/db_xref="InterPro:IPR000534"
/db_xref="InterPro:IPR011534"
/db_xref="InterPro:IPR012280"
/db_xref="GeneID:8159382"
/translation="MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA
PSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLR
MKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVAT
YQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNF
GVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQ
AFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRK
LNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
misc_feature 335610..336707
/locus_tag="ECBD_0309"
/note="aspartate-semialdehyde dehydrogenase; Reviewed;
Region: PRK06598"
/db_xref="CDD:235839"
misc_feature 335616..335966
/locus_tag="ECBD_0309"
/note="Semialdehyde dehydrogenase, NAD binding domain;
Region: Semialdhyde_dh; smart00859"
/db_xref="CDD:214863"
gene 336986..339172
/locus_tag="ECBD_0310"
/db_xref="GeneID:8159383"
CDS 336986..339172
/locus_tag="ECBD_0310"
/inference="protein motif:TFAM:TIGR01515"
/note="catalyzes the transfer of a segment of a
1,4-alpha-D-glucan chain to a primary hydroxy group in a
similar glucan chain"
/codon_start=1
/transl_table=11
/product="glycogen branching enzyme"
/protein_id="YP_003034570.1"
/db_xref="GI:253771739"
/db_xref="InterPro:IPR004193"
/db_xref="InterPro:IPR006047"
/db_xref="InterPro:IPR006048"
/db_xref="InterPro:IPR006407"
/db_xref="InterPro:IPR006589"
/db_xref="GeneID:8159383"
/translation="MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDAT
DVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFG
PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
GRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETAS
LICGLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
KWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVIL
DWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALY
WIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQV
SGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLT
FGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
FMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPY
GFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD
SMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE"
misc_feature 336998..339169
/locus_tag="ECBD_0310"
/note="glycogen branching enzyme; Provisional; Region:
PRK05402"
/db_xref="CDD:235445"
misc_feature 337337..337648
/locus_tag="ECBD_0310"
/note="N-terminal Early set domain associated with the
catalytic domain of prokaryotic glycogen branching enzyme;
Region: E_set_GBE_prok_N; cd02855"
/db_xref="CDD:199885"
misc_feature 337619..338821
/locus_tag="ECBD_0310"
/note="Alpha amylase catalytic domain found in the
Glycogen branching enzyme (also called 1,4-alpha-glucan
branching enzyme); Region: AmyAc_Glg_BE; cd11322"
/db_xref="CDD:200461"
misc_feature order(338192..338194,338198..338203,338357..338359,
338558..338563)
/locus_tag="ECBD_0310"
/note="active site"
/db_xref="CDD:200461"
misc_feature order(338198..338200,338357..338359,338561..338563)
/locus_tag="ECBD_0310"
/note="catalytic site [active]"
/db_xref="CDD:200461"
misc_feature 338867..339169
/locus_tag="ECBD_0310"
/note="Alpha amylase, C-terminal all-beta domain; Region:
Alpha-amylase_C; pfam02806"
/db_xref="CDD:217237"
gene 339169..341142
/locus_tag="ECBD_0311"
/db_xref="GeneID:8159384"
CDS 339169..341142
/locus_tag="ECBD_0311"
/inference="protein motif:TFAM:TIGR02100"
/note="catalyzes the hydrolysis of the
alpha-1,6-glucosidic linkages in partially depolymerized
glycogen"
/codon_start=1
/transl_table=11
/product="glycogen debranching enzyme"
/protein_id="YP_003034571.1"
/db_xref="GI:253771740"
/db_xref="InterPro:IPR004193"
/db_xref="InterPro:IPR006047"
/db_xref="InterPro:IPR006589"
/db_xref="InterPro:IPR011837"
/db_xref="GeneID:8159384"
/translation="MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQE
HRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDG
EFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKG
LTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNY
WGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPL
FSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFR
FDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEW
NDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDC
VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQG
TPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVE
NRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPA
GEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR"
misc_feature 339169..341139
/locus_tag="ECBD_0311"
/note="glycogen debranching enzyme; Provisional; Region:
PRK03705"
/db_xref="CDD:235152"
misc_feature 339199..339564
/locus_tag="ECBD_0311"
/note="N-terminal Early set domain associated with the
catalytic domain of Glycogen debranching enzyme and
bacterial isoamylase (also called glycogen
6-glucanohydrolase); Region: E_set_GDE_Isoamylase_N;
cd02856"
/db_xref="CDD:199886"
misc_feature 339574..340851
/locus_tag="ECBD_0311"
/note="Alpha amylase catalytic domain found in glycogen
debranching enzymes; Region: AmyAc_Glg_debranch; cd11326"
/db_xref="CDD:200465"
misc_feature order(340168..340170,340174..340179,340279..340281,
340492..340497)
/locus_tag="ECBD_0311"
/note="active site"
/db_xref="CDD:200465"
misc_feature order(340174..340176,340279..340281,340495..340497)
/locus_tag="ECBD_0311"
/note="catalytic site [active]"
/db_xref="CDD:200465"
gene 341160..342455
/gene="glgC"
/locus_tag="ECBD_0312"
/db_xref="GeneID:8159385"
CDS 341160..342455
/gene="glgC"
/locus_tag="ECBD_0312"
/inference="protein motif:TFAM:TIGR02091"
/note="catalyzes the formation of ADP-glucose and
diphosphate from ATP and alpha-D-glucose 1-phosphate"
/codon_start=1
/transl_table=11
/product="glucose-1-phosphate adenylyltransferase"
/protein_id="YP_003034572.1"
/db_xref="GI:253771741"
/db_xref="InterPro:IPR005835"
/db_xref="InterPro:IPR005836"
/db_xref="InterPro:IPR011831"
/db_xref="GeneID:8159385"
/translation="MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
VHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLL
PAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
ARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVF
DADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRD
VGTLEAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLV
SGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPE
GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER"
misc_feature 341172..342446
/gene="glgC"
/locus_tag="ECBD_0312"
/note="glucose-1-phosphate adenylyltransferase;
Provisional; Region: glgC; PRK00725"
/db_xref="CDD:234824"
misc_feature 341223..341990
/gene="glgC"
/locus_tag="ECBD_0312"
/note="ADP-glucose pyrophosphorylase is involved in the
biosynthesis of glycogen or starch; Region:
ADP_Glucose_PP; cd02508"
/db_xref="CDD:133002"
misc_feature order(341232..341234,341238..341243,341502..341504,
341508..341510,341580..341585,341874..341876,
341880..341885)
/gene="glgC"
/locus_tag="ECBD_0312"
/note="ligand binding site; other site"
/db_xref="CDD:133002"
misc_feature order(341391..341393,341400..341402,341457..341459,
341466..341468,341475..341477,341529..341531,
341535..341537,341547..341552)
/gene="glgC"
/locus_tag="ECBD_0312"
/note="oligomer interface; other site"
/db_xref="CDD:133002"
misc_feature <342207..342425
/gene="glgC"
/locus_tag="ECBD_0312"
/note="Glucose-1-phosphate adenylyltransferase, C-terminal
Left-handed parallel beta helix (LbH) domain:
Glucose-1-phosphate adenylyltransferase is also known as
ADP-glucose synthase or ADP-glucose pyrophosphorylase. It
catalyzes the first committed and...; Region:
LbH_G1P_AT_C; cd04651"
/db_xref="CDD:100056"
misc_feature order(342312..342317,342414..342416)
/gene="glgC"
/locus_tag="ECBD_0312"
/note="sulfate 1 binding site; other site"
/db_xref="CDD:100056"
gene 342455..343888
/gene="glgA"
/locus_tag="ECBD_0313"
/db_xref="GeneID:8159386"
CDS 342455..343888
/gene="glgA"
/locus_tag="ECBD_0313"
/inference="protein motif:TFAM:TIGR02095"
/note="catalyzes the formation of alpha-1,4-glucan chains
from ADP-glucose"
/codon_start=1
/transl_table=11
/product="glycogen synthase"
/protein_id="YP_003034573.1"
/db_xref="GI:253771742"
/db_xref="InterPro:IPR001296"
/db_xref="InterPro:IPR011835"
/db_xref="InterPro:IPR013534"
/db_xref="GeneID:8159386"
/translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF
PDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFA
YTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV
HNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE
ITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAEN
KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVL
QEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL
PLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRF
VQRQAMAMDFSWQVAAKSYRELYYRLK"
misc_feature 342455..343882
/gene="glgA"
/locus_tag="ECBD_0313"
/note="glycogen synthase; Provisional; Region: glgA;
PRK00654"
/db_xref="CDD:234809"
misc_feature 342458..343879
/gene="glgA"
/locus_tag="ECBD_0313"
/note="This family is most closely related to the GT1
family of glycosyltransferases. Glycogen synthase
catalyzes the formation and elongation of the
alpha-1,4-glucose backbone using ADP-glucose, the second
and key step of glycogen biosynthesis. This family...;
Region: GT1_Glycogen_synthase_DULL1_like; cd03791"
/db_xref="CDD:99965"
misc_feature order(342497..342499,342506..342508,343346..343354,
343514..343519,343532..343534,343583..343585,
343598..343600)
/gene="glgA"
/locus_tag="ECBD_0313"
/note="ADP-binding pocket [chemical binding]; other site"
/db_xref="CDD:99965"
misc_feature order(343103..343105,343643..343645,343658..343663,
343667..343669,343751..343753)
/gene="glgA"
/locus_tag="ECBD_0313"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99965"
gene 343907..346354
/locus_tag="ECBD_0314"
/db_xref="GeneID:8159387"
CDS 343907..346354
/locus_tag="ECBD_0314"
/EC_number="2.4.1.1"
/inference="protein motif:TFAM:TIGR02093"
/note="KEGG: sfv:SFV_3437 glycogen phosphorylase;
TIGRFAM: glycogen/starch/alpha-glucan phosphorylase;
PFAM: glycosyl transferase family 35"
/codon_start=1
/transl_table=11
/product="glycogen/starch/alpha-glucan phosphorylase"
/protein_id="YP_003034574.1"
/db_xref="GI:253771743"
/db_xref="InterPro:IPR000811"
/db_xref="InterPro:IPR011833"
/db_xref="GeneID:8159387"
/translation="MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNA
TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGAL
EAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQ
IIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
SGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRL
LIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
ADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLGRNWRTDLSLLNELQQHCD
FPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
TRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
VFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML
DHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRY
RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDR
TIKEYADHIWHIDPVRL"
misc_feature 343907..346351
/locus_tag="ECBD_0314"
/note="glycogen phosphorylase; Provisional; Region:
PRK14986"
/db_xref="CDD:184948"
misc_feature 343958..346336
/locus_tag="ECBD_0314"
/note="This is a family of oligosaccharide phosphorylases.
It includes yeast and mammalian glycogen phosphorylases,
plant starch/glucan phosphorylase, as well as the
maltodextrin phosphorylases of bacteria. The members of
this family catalyze the breakdown of...; Region:
GT1_Glycogen_Phosphorylase; cd04300"
/db_xref="CDD:99996"
misc_feature order(343958..343960,343964..343966,343970..343975,
343979..343987,344054..344062,344453..344455,
344720..344722,344729..344731)
/locus_tag="ECBD_0314"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99996"
misc_feature order(344138..344140,344144..344146,344276..344284,
344714..344716,344723..344725,344729..344731,
344750..344752,344867..344869,344873..344875,
344981..344986,344996..344998,345302..345304,
345323..345325,345554..345559,345563..345574,
345674..345676,345689..345691,345695..345697,
345797..345802,345866..345868,345872..345883,
345890..345892)
/locus_tag="ECBD_0314"
/note="active site pocket [active]"
/db_xref="CDD:99996"
gene 346483..346764
/locus_tag="ECBD_0315"
/db_xref="GeneID:8159388"
CDS 346483..346764
/locus_tag="ECBD_0315"
/inference="similar to AA sequence:KEGG:SFV_3434"
/note="KEGG: sfv:SFV_3434 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034575.1"
/db_xref="GI:253771744"
/db_xref="GeneID:8159388"
/translation="MQNRKWILTSLVMTFFGIPILAQFLAVVIAMLGVGLAGIIEVCN
ILITPTIYLLLKIFMLALGALMLFFSGRVGNVPEFCYVGYDGVGFAVIP"
sig_peptide 346483..346551
/locus_tag="ECBD_0315"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.930) with cleavage site probability 0.720 at
residue 23"
gene complement(346970..348475)
/gene="glpD"
/locus_tag="ECBD_0316"
/db_xref="GeneID:8159389"
CDS complement(346970..348475)
/gene="glpD"
/locus_tag="ECBD_0316"
/inference="protein motif:PFAM:PF01266"
/note="in Escherichia coli this homodimeric enzyme is
expressed under aerobic conditions; anaerobic expression
is repressed by the arcAB system; converts
sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy
acetone phosphate and ubiquinol-8; associates with the
cytoplasmic membrane"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate dehydrogenase"
/protein_id="YP_003034576.1"
/db_xref="GI:253771745"
/db_xref="InterPro:IPR000447"
/db_xref="InterPro:IPR006076"
/db_xref="GeneID:8159389"
/translation="METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSA
SSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
IGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGM
HLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYK
GDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDY
TLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIE
GDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEDFGHEFYEAE
LKYLVDHEWVRRADDALWRRTKQGMWLNADQQSRVSQWLVEYTQQRLSLAS"
misc_feature complement(346973..348475)
/gene="glpD"
/locus_tag="ECBD_0316"
/note="glycerol-3-phosphate dehydrogenase; Reviewed;
Region: glpD; PRK12266"
/db_xref="CDD:237027"
gene 348665..348991
/gene="glpE"
/locus_tag="ECBD_0317"
/db_xref="GeneID:8159390"
CDS 348665..348991
/gene="glpE"
/locus_tag="ECBD_0317"
/EC_number="2.8.1.1"
/inference="protein motif:PRIAM:2.8.1.1"
/note="belongs to rhodanese family; thiosulfate
thiotransferase; in Escherichia coli this enzyme catalyzes
the formation of thiocyanate from thiosulfate and cyanide
with low efficiency; contains an active site cysteine"
/codon_start=1
/transl_table=11
/product="thiosulfate sulfurtransferase"
/protein_id="YP_003034577.1"
/db_xref="GI:253771746"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:8159390"
/translation="MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLT
NDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPA
EVAYGA"
misc_feature 348680..348958
/gene="glpE"
/locus_tag="ECBD_0317"
/note="GlpE sulfurtransferase (ST) and homologs are
members of the Rhodanese Homology Domain superfamily.
Unlike other rhodanese sulfurtransferases, GlpE is a
single domain protein but indications are that it
functions as a dimer. The active site contains a...;
Region: GlpE_ST; cd01444"
/db_xref="CDD:238721"
misc_feature 348857..348859
/gene="glpE"
/locus_tag="ECBD_0317"
/note="active site residue [active]"
/db_xref="CDD:238721"
gene 349036..349866
/locus_tag="ECBD_0318"
/db_xref="GeneID:8159391"
CDS 349036..349866
/locus_tag="ECBD_0318"
/EC_number="3.4.21.105"
/inference="protein motif:PRIAM:3.4.21.105"
/note="protease responsible for the cleavage between Ser
and Asp residues of proteins in regions of high local
hydrophilicity"
/codon_start=1
/transl_table=11
/product="intramembrane serine protease GlpG"
/protein_id="YP_003034578.1"
/db_xref="GI:253771747"
/db_xref="InterPro:IPR002610"
/db_xref="GeneID:8159391"
/translation="MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQ
AERVRAELARFLENPADPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVMMI
ACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWY
LGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERD
PQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK
"
misc_feature 349036..349863
/locus_tag="ECBD_0318"
/note="intramembrane serine protease GlpG; Provisional;
Region: PRK10907"
/db_xref="CDD:182828"
misc_feature 349036..349332
/locus_tag="ECBD_0318"
/note="Protein of unknown function (DUF3582); Region:
DUF3582; pfam12122"
/db_xref="CDD:221430"
misc_feature 349309..349860
/locus_tag="ECBD_0318"
/note="Membrane associated serine protease [Amino acid
transport and metabolism]; Region: COG0705"
/db_xref="CDD:223777"
gene 349883..350641
/locus_tag="ECBD_0319"
/db_xref="GeneID:8159392"
CDS 349883..350641
/locus_tag="ECBD_0319"
/inference="protein motif:PFAM:PF08220"
/note="represses the glpD, glpFK, glpTQ, and glpACB
operons involved in glycerol-3-phosphate metabolism"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor GlpR"
/protein_id="YP_003034579.1"
/db_xref="GI:253771748"
/db_xref="InterPro:IPR001034"
/db_xref="InterPro:IPR014036"
/db_xref="GeneID:8159392"
/translation="MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELA
EQNLILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTT
PEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFI
SQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVN
MGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC"
misc_feature 349883..350638
/locus_tag="ECBD_0319"
/note="DNA-binding transcriptional repressor GlpR;
Provisional; Region: PRK10906"
/db_xref="CDD:182827"
misc_feature 349898..350065
/locus_tag="ECBD_0319"
/note="DeoR-like helix-turn-helix domain; Region:
HTH_DeoR; pfam08220"
/db_xref="CDD:116806"
misc_feature 350096..350581
/locus_tag="ECBD_0319"
/note="DeoR C terminal sensor domain; Region: DeoRC;
pfam00455"
/db_xref="CDD:201239"
gene complement(350623..352221)
/locus_tag="ECBD_0320"
/db_xref="GeneID:8159393"
CDS complement(350623..352221)
/locus_tag="ECBD_0320"
/inference="protein motif:PFAM:PF06956"
/note="PFAM: regulator of RNA terminal phosphate cyclase;
sigma-54 factor interaction domain-containing protein;
ATPase associated with various cellular activities AAA_5;
SMART: ATPase AAA;
KEGG: sfv:SFV_3429 2-component regulator"
/codon_start=1
/transl_table=11
/product="Sigma 54 interacting domain protein"
/protein_id="YP_003034580.1"
/db_xref="GI:253771749"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR009715"
/db_xref="InterPro:IPR011704"
/db_xref="GeneID:8159393"
/translation="MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRL
ELLHDARSRSLFETLKRDIASVSPETEVVSVEIELHNPWDFEEVYACLHDFARGYEFQ
PEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQSSPPRKKEQPRGPGEVTIIDLD
LSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTG
AGKSFLARRILELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREG
LLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDL
RQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTE
ARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQES
RPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQLFDVSRQGKASVNDA
DRLRKYLARFGLTWEAVQDQHSSS"
misc_feature complement(350629..352221)
/locus_tag="ECBD_0320"
/note="Sigma54-dependent transcription regulator
containing an AAA-type ATPase domain and a DNA-binding
domain [Transcription / Signal transduction mechanisms];
Region: RtcR; COG4650"
/db_xref="CDD:226997"
misc_feature complement(351667..352221)
/locus_tag="ECBD_0320"
/note="Regulator of RNA terminal phosphate cyclase;
Region: RtcR; pfam06956"
/db_xref="CDD:148527"
misc_feature complement(351163..351651)
/locus_tag="ECBD_0320"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(351556..351579)
/locus_tag="ECBD_0320"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(351229..351231,351355..351357,
351553..351576))
/locus_tag="ECBD_0320"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(351352..351369)
/locus_tag="ECBD_0320"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(351172..351174)
/locus_tag="ECBD_0320"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene 352410..353636
/locus_tag="ECBD_0321"
/db_xref="GeneID:8159394"
CDS 352410..353636
/locus_tag="ECBD_0321"
/inference="protein motif:PFAM:PF01139"
/note="PFAM: protein of unknown function UPF0027"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034581.1"
/db_xref="GI:253771750"
/db_xref="InterPro:IPR001233"
/db_xref="GeneID:8159394"
/translation="MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIA
VMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQA
IETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHL
GTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRD
LAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEE
INCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCS
CSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSD
LVEVIYTLRQVVCVKG"
misc_feature 352437..353633
/locus_tag="ECBD_0321"
/note="Uncharacterized protein family UPF0027; Region:
UPF0027; pfam01139"
/db_xref="CDD:216324"
misc_feature 352473..353633
/locus_tag="ECBD_0321"
/note="hypothetical protein; Reviewed; Region: PRK09588"
/db_xref="CDD:181972"
gene 353640..354656
/locus_tag="ECBD_0322"
/db_xref="GeneID:8159395"
CDS 353640..354656
/locus_tag="ECBD_0322"
/EC_number="6.5.1.4"
/inference="protein motif:TFAM:TIGR03399"
/note="catalyzes the conversion of terminal3'-phosphate of
RNA to the 2',3'-cyclicphosphodiester"
/codon_start=1
/transl_table=11
/product="RNA 3'-terminal-phosphate cyclase"
/protein_id="YP_003034582.1"
/db_xref="GI:253771751"
/db_xref="InterPro:IPR000228"
/db_xref="InterPro:IPR013796"
/db_xref="InterPro:IPR017770"
/db_xref="GeneID:8159395"
/translation="MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAK
PGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVL
QTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFY
PAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSL
HEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLAS
TAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTR
VSIE"
misc_feature 353646..354644
/locus_tag="ECBD_0322"
/note="RNA 3'-terminal-phosphate cyclase; Provisional;
Region: PRK04204"
/db_xref="CDD:235255"
misc_feature 353658..354623
/locus_tag="ECBD_0322"
/note="RNA 3' phosphate cyclase domain - RNA phosphate
cyclases are enzymes that catalyze the ATP-dependent
conversion of 3'-phosphate at the end of RNA into 2',
3'-cyclic phosphodiester bond. The enzymes are conserved
in eucaryotes; Region: RNA_Cyclase; cd00295"
/db_xref="CDD:238183"
misc_feature order(353682..353687,353697..353699,353754..353756,
353763..353765,353769..353771,353787..353792,
353946..353948,354495..354497,354561..354563)
/locus_tag="ECBD_0322"
/note="putative active site [active]"
/db_xref="CDD:238183"
misc_feature 354561..354563
/locus_tag="ECBD_0322"
/note="adenylation catalytic residue [active]"
/db_xref="CDD:238183"
gene 355720..356181
/locus_tag="ECBD_0324"
/pseudo
/db_xref="GeneID:8159397"
gene complement(356294..357499)
/locus_tag="ECBD_0325"
/db_xref="GeneID:8159398"
CDS complement(356294..357499)
/locus_tag="ECBD_0325"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: seh:SeHA_C4724 tetracycline resistance protein,
class B"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily MFS_1"
/protein_id="YP_003034583.1"
/db_xref="GI:253771752"
/db_xref="InterPro:IPR001958"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8159398"
/translation="MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFG
VLLALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRL
LSGITGATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSP
FFIAALLNIVTFLVVMFWFRETKNTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYF
SAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKT
AVLLGFIADSSAFAFLAFISEGWLVFPVLILLAGGGIALPALQGVMSIQTKSHQQGAL
QGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIIILLSMTFMLTPQA
QGSKQETSA"
misc_feature complement(356339..357481)
/locus_tag="ECBD_0325"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(356612..357475)
/locus_tag="ECBD_0325"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:219516"
misc_feature complement(order(356462..356464,356471..356476,
356483..356488,356495..356500,356531..356533,
356540..356545,356555..356557,356564..356569,
356576..356578,356714..356716,356726..356728,
356738..356740,356750..356752,356762..356764,
356804..356806,356813..356818,356825..356830,
356837..356839,357074..357076,357092..357097,
357104..357109,357143..357145,357152..357154,
357161..357166,357173..357178,357314..357319,
357323..357328,357338..357340,357347..357352,
357359..357361,357419..357424,357428..357436,
357443..357445))
/locus_tag="ECBD_0325"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 357581..358204
/locus_tag="ECBD_0326"
/db_xref="GeneID:8159399"
CDS 357581..358204
/locus_tag="ECBD_0326"
/inference="protein motif:PFAM:PF02909"
/note="PFAM: Tetracyclin repressor domain protein;
regulatory protein TetR;
KEGG: apa:APP7_1823 tetracycline repressor protein TetR"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003034584.1"
/db_xref="GI:253771753"
/db_xref="InterPro:IPR001647"
/db_xref="InterPro:IPR003012"
/db_xref="InterPro:IPR004111"
/db_xref="GeneID:8159399"
/translation="MSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWH
VKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLG
TRPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERET
PTTDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGS"
misc_feature 357581..358195
/locus_tag="ECBD_0326"
/note="tetracycline repressor protein TetR; Provisional;
Region: PRK13756"
/db_xref="CDD:172294"
misc_feature 357605..357745
/locus_tag="ECBD_0326"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
misc_feature 357782..358183
/locus_tag="ECBD_0326"
/note="Tetracyclin repressor, C-terminal all-alpha domain;
Region: TetR_C; pfam02909"
/db_xref="CDD:202462"
gene complement(358182..358481)
/locus_tag="ECBD_0327"
/pseudo
/db_xref="GeneID:8159400"
gene 360950..363343
/locus_tag="ECBD_0328"
/db_xref="GeneID:8158908"
CDS 360950..363343
/locus_tag="ECBD_0328"
/EC_number="2.4.1.1"
/inference="protein motif:TFAM:TIGR02093"
/note="KEGG: ssn:SSON_3549 maltodextrin phosphorylase;
TIGRFAM: glycogen/starch/alpha-glucan phosphorylase;
PFAM: glycosyl transferase family 35"
/codon_start=1
/transl_table=11
/product="glycogen/starch/alpha-glucan phosphorylase"
/protein_id="YP_003034585.1"
/db_xref="GI:253771754"
/db_xref="InterPro:IPR000811"
/db_xref="InterPro:IPR011833"
/db_xref="GeneID:8158908"
/translation="MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALA
EMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDL
LEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPD
DWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPL
RLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAW
AITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK
VWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
GITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANK
VRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP
RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIP
AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVE
QVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYL
VMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR"
misc_feature 360953..363340
/locus_tag="ECBD_0328"
/note="maltodextrin phosphorylase; Provisional; Region:
PRK14985"
/db_xref="CDD:237881"
misc_feature 360983..363334
/locus_tag="ECBD_0328"
/note="This is a family of oligosaccharide phosphorylases.
It includes yeast and mammalian glycogen phosphorylases,
plant starch/glucan phosphorylase, as well as the
maltodextrin phosphorylases of bacteria. The members of
this family catalyze the breakdown of...; Region:
GT1_Glycogen_Phosphorylase; cd04300"
/db_xref="CDD:99996"
misc_feature order(360983..360985,360989..360991,360995..361000,
361004..361012,361466..361468,361724..361726,
361733..361735)
/locus_tag="ECBD_0328"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99996"
misc_feature order(361151..361153,361157..361159,361289..361297,
361718..361720,361727..361729,361733..361735,
361754..361756,361871..361873,361877..361879,
361985..361990,362000..362002,362297..362299,
362318..362320,362549..362554,362558..362569,
362669..362671,362684..362686,362690..362692,
362792..362797,362861..362863,362867..362878,
362885..362887)
/locus_tag="ECBD_0328"
/note="active site pocket [active]"
/db_xref="CDD:99996"
gene 363353..365437
/gene="malQ"
/locus_tag="ECBD_0329"
/db_xref="GeneID:8155935"
CDS 363353..365437
/gene="malQ"
/locus_tag="ECBD_0329"
/EC_number="2.4.1.25"
/inference="protein motif:TFAM:TIGR00217"
/note="amylomaltase; acts to release glucose from
maltodextrins"
/codon_start=1
/transl_table=11
/product="4-alpha-glucanotransferase"
/protein_id="YP_003034586.1"
/db_xref="GI:253771755"
/db_xref="InterPro:IPR003385"
/db_xref="GeneID:8155935"
/translation="MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQR
TATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPT
KLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG
IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA
VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDE
QMAAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFC
EEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDREL
YCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHV
MSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGK
LRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWECGDLTLGKT
LGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRY
IADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLESMFADDGVNKLLKD
LDRRRRAAAKKK"
misc_feature 363353..365383
/gene="malQ"
/locus_tag="ECBD_0329"
/note="4-alpha-glucanotransferase; Provisional; Region:
malQ; PRK11052"
/db_xref="CDD:236831"
misc_feature 363737..365383
/gene="malQ"
/locus_tag="ECBD_0329"
/note="4-alpha-glucanotransferase; Region: malQ;
TIGR00217"
/db_xref="CDD:129321"
gene complement(365548..366864)
/locus_tag="ECBD_0330"
/db_xref="GeneID:8155936"
CDS complement(365548..366864)
/locus_tag="ECBD_0330"
/inference="protein motif:TFAM:TIGR00791"
/note="TIGRFAM: gluconate transporter;
PFAM: gluconate transporter; citrate transporter;
KEGG: sbc:SbBS512_E3796 high-affinity gluconate
transporter"
/codon_start=1
/transl_table=11
/product="gluconate transporter"
/protein_id="YP_003034587.1"
/db_xref="GI:253771756"
/db_xref="InterPro:IPR003474"
/db_xref="InterPro:IPR004680"
/db_xref="GeneID:8155936"
/translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
KVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
LTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGP
TAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEE
MPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNI
SPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSH
VNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLNMVI"
misc_feature complement(365551..366816)
/locus_tag="ECBD_0330"
/note="high-affinity gluconate transporter; Provisional;
Region: PRK14984"
/db_xref="CDD:237880"
misc_feature complement(365551..366816)
/locus_tag="ECBD_0330"
/note="gluconate transporter; Region: gntP; TIGR00791"
/db_xref="CDD:129873"
gene complement(367224..367799)
/locus_tag="ECBD_0331"
/db_xref="GeneID:8155937"
CDS complement(367224..367799)
/locus_tag="ECBD_0331"
/inference="protein motif:TFAM:TIGR03341"
/note="cytoplasmic protein that may be involved in the
utilization of double-stranded DNA as a carbon source"
/codon_start=1
/transl_table=11
/product="DNA uptake protein"
/protein_id="YP_003034588.1"
/db_xref="GI:253771757"
/db_xref="InterPro:IPR000361"
/db_xref="InterPro:IPR001075"
/db_xref="InterPro:IPR017726"
/db_xref="GeneID:8155937"
/translation="MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYC
PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
DDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK
EGIEKQLLNEFPELKGVRDLTEHQRGEHSYY"
misc_feature complement(367227..367799)
/locus_tag="ECBD_0331"
/note="Fe/S biogenesis protein NfuA; Provisional; Region:
PRK11190"
/db_xref="CDD:183027"
misc_feature complement(367509..367799)
/locus_tag="ECBD_0331"
/note="Fe-S cluster assembly scaffold protein
[Posttranslational modification, protein turnover,
chaperones]; Region: sufA; COG0316"
/db_xref="CDD:223393"
misc_feature complement(367233..367508)
/locus_tag="ECBD_0331"
/note="Thioredoxin-like proteins and domains
[Posttranslational modification, protein turnover,
chaperones]; Region: COG0694"
/db_xref="CDD:223766"
gene complement(367858..368541)
/locus_tag="ECBD_0332"
/db_xref="GeneID:8155938"
CDS complement(367858..368541)
/locus_tag="ECBD_0332"
/inference="protein motif:TFAM:TIGR00201"
/note="involved in high-affinity gluconate transport"
/codon_start=1
/transl_table=11
/product="gluconate periplasmic binding protein"
/protein_id="YP_003034589.1"
/db_xref="GI:253771758"
/db_xref="InterPro:IPR005222"
/db_xref="GeneID:8155938"
/translation="MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPA
THSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVL
HARRTTGLQLPDRIVSVPLWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRAT
ATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAAAV
QVWCLCRTL"
misc_feature complement(367861..368541)
/locus_tag="ECBD_0332"
/note="DNA utilization protein GntX; Provisional; Region:
PRK11595"
/db_xref="CDD:183221"
misc_feature complement(367873..368205)
/locus_tag="ECBD_0332"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature complement(order(367936..367950,367954..367962,
368155..368157,368182..368184))
/locus_tag="ECBD_0332"
/note="active site"
/db_xref="CDD:206754"
gene 368579..369349
/locus_tag="ECBD_0333"
/db_xref="GeneID:8155939"
CDS 368579..369349
/locus_tag="ECBD_0333"
/EC_number="3.1.1.1"
/inference="protein motif:TFAM:TIGR01738"
/note="Shows carboxylesterase activity with a preference
for short chain fatty acid esters; involved in
pimeloyl-CoA synthesis"
/codon_start=1
/transl_table=11
/product="carboxylesterase BioH"
/protein_id="YP_003034590.1"
/db_xref="GI:253771759"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR010076"
/db_xref="GeneID:8155939"
/translation="MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHL
VDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQAL
VTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA
LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML
DKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQRV"
misc_feature 368579..369346
/locus_tag="ECBD_0333"
/note="carboxylesterase BioH; Provisional; Region:
PRK10349"
/db_xref="CDD:137836"
misc_feature <368813..>368917
/locus_tag="ECBD_0333"
/note="homoserine O-acetyltransferase; Provisional;
Region: metX; cl17114"
/db_xref="CDD:247710"
gene complement(369378..370256)
/locus_tag="ECBD_0334"
/db_xref="GeneID:8155940"
CDS complement(369378..370256)
/locus_tag="ECBD_0334"
/inference="protein motif:PFAM:PF04754"
/note="PFAM: transposase YhgA family protein;
KEGG: sbc:SbBS512_E3792 transposase, YhgA"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034591.1"
/db_xref="GI:253771760"
/db_xref="InterPro:IPR006842"
/db_xref="InterPro:IPR010106"
/db_xref="GeneID:8155940"
/translation="MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKT
LKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAA
MQNHLDAGYKTLPMVVPLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVT
VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQ
TGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLADI
MRFTGLSEEELAAASQ"
misc_feature complement(369381..370256)
/locus_tag="ECBD_0334"
/note="putative transposase; Provisional; Region:
PRK09857"
/db_xref="CDD:182117"
misc_feature complement(369627..370235)
/locus_tag="ECBD_0334"
/note="Putative transposase, YhgA-like; Region:
Transposase_31; pfam04754"
/db_xref="CDD:218244"
gene complement(370459..370695)
/locus_tag="ECBD_0335"
/db_xref="GeneID:8155941"
CDS complement(370459..370695)
/locus_tag="ECBD_0335"
/inference="protein motif:PFAM:PF09012"
/note="PFAM: protein of unknown function DUF1920;
KEGG: sdy:SDY_3666 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034592.1"
/db_xref="GI:253771761"
/db_xref="InterPro:IPR015102"
/db_xref="GeneID:8155941"
/translation="MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMG
KAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR"
misc_feature complement(370462..370695)
/locus_tag="ECBD_0335"
/note="ferrous iron transport protein FeoC; Provisional;
Region: PRK15431"
/db_xref="CDD:185329"
gene complement(370695..373016)
/gene="feoB"
/locus_tag="ECBD_0336"
/db_xref="GeneID:8155942"
CDS complement(370695..373016)
/gene="feoB"
/locus_tag="ECBD_0336"
/inference="protein motif:TFAM:TIGR00437"
/note="cytoplasmic membrane ferrous uptake system
permease; mutations disrupt the ability of Escherichia
coli to take up ferrous iron; GTP-binding protein which
requires GTP for efficient iron(II) uptake"
/codon_start=1
/transl_table=11
/product="ferrous iron transporter B"
/protein_id="YP_003034593.1"
/db_xref="GI:253771762"
/db_xref="InterPro:IPR002917"
/db_xref="InterPro:IPR003373"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR011619"
/db_xref="InterPro:IPR011640"
/db_xref="InterPro:IPR011642"
/db_xref="GeneID:8155942"
/translation="MKKLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQ
FSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNL
YLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK
LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAY
AGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDK
IVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDW
LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQN
GALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRL
KGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHED
NWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAIDETWQSL
KDTFSLSVLMNPIEASKGDGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMG
AIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVVIG
LLRRARSRVDIELLATRKSVSSCCAASTTGDCH"
misc_feature complement(370698..373016)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="ferrous iron transport protein B; Reviewed; Region:
feoB; PRK09554"
/db_xref="CDD:236563"
misc_feature complement(372510..372995)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="Ferrous iron transport protein B (FeoB) family;
Region: FeoB; cd01879"
/db_xref="CDD:206667"
misc_feature complement(372966..372989)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="G1 box; other site"
/db_xref="CDD:206667"
misc_feature complement(order(372564..372572,372648..372650,
372654..372659,372963..372974,372978..372980))
/gene="feoB"
/locus_tag="ECBD_0336"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206667"
misc_feature complement(372897..372911)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="Switch I region; other site"
/db_xref="CDD:206667"
misc_feature complement(372906..372908)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="G2 box; other site"
/db_xref="CDD:206667"
misc_feature complement(372840..372851)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="G3 box; other site"
/db_xref="CDD:206667"
misc_feature complement(order(372759..372764,372774..372803,
372816..372842))
/gene="feoB"
/locus_tag="ECBD_0336"
/note="Switch II region; other site"
/db_xref="CDD:206667"
misc_feature complement(372648..372659)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="G4 box; other site"
/db_xref="CDD:206667"
misc_feature complement(372564..372572)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="G5 box; other site"
/db_xref="CDD:206667"
misc_feature complement(371721..371969)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="Nucleoside recognition; Region: Gate; pfam07670"
/db_xref="CDD:219507"
misc_feature complement(371496..371654)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="Ferrous iron transport protein B C terminus;
Region: FeoB_C; pfam07664"
/db_xref="CDD:203715"
misc_feature complement(<371241..371483)
/gene="feoB"
/locus_tag="ECBD_0336"
/note="Nucleoside recognition; Region: Gate; pfam07670"
/db_xref="CDD:219507"
gene complement(373033..373260)
/gene="feoA"
/locus_tag="ECBD_0337"
/db_xref="GeneID:8155943"
CDS complement(373033..373260)
/gene="feoA"
/locus_tag="ECBD_0337"
/inference="protein motif:PFAM:PF04023"
/note="PFAM: FeoA family protein;
KEGG: sdy:SDY_3668 ferrous iron transporter A"
/codon_start=1
/transl_table=11
/product="ferrous iron transporter A"
/protein_id="YP_003034594.1"
/db_xref="GI:253771763"
/db_xref="InterPro:IPR007167"
/db_xref="GeneID:8155943"
/translation="MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAP
LGDPIHIETRRVSLVLRKKDLALLEVEAVSC"
misc_feature complement(373039..373260)
/gene="feoA"
/locus_tag="ECBD_0337"
/note="ferrous iron transport protein A; Reviewed; Region:
feoA; PRK09555"
/db_xref="CDD:181949"
gene complement(373717..376038)
/locus_tag="ECBD_0338"
/db_xref="GeneID:8155944"
CDS complement(373717..376038)
/locus_tag="ECBD_0338"
/inference="protein motif:PFAM:PF00575"
/note="PFAM: RNA binding S1 domain protein;
SMART: Resolvase RNase H domain protein fold; RNA binding
S1 domain protein;
KEGG: sbc:SbBS512_E3786 transcriptional accessory
protein"
/codon_start=1
/transl_table=11
/product="RNA binding S1 domain protein"
/protein_id="YP_003034595.1"
/db_xref="GI:253771764"
/db_xref="InterPro:IPR003029"
/db_xref="InterPro:IPR006641"
/db_xref="GeneID:8155944"
/translation="MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEI
TGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELED
LYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTV
PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK
GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP
GLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASR
ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR
VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS
TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK
PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS
LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ
NNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR"
misc_feature complement(373723..376038)
/locus_tag="ECBD_0338"
/note="Transcriptional accessory protein [Transcription];
Region: Tex; COG2183"
/db_xref="CDD:225094"
misc_feature complement(375433..376011)
/locus_tag="ECBD_0338"
/note="Tex-like protein N-terminal domain; Region: Tex_N;
pfam09371"
/db_xref="CDD:150144"
misc_feature complement(374767..375060)
/locus_tag="ECBD_0338"
/note="Likely ribonuclease with RNase H fold; Region:
YqgFc; smart00732"
/db_xref="CDD:128971"
misc_feature complement(373885..374088)
/locus_tag="ECBD_0338"
/note="S1_Tex: The C-terminal S1 domain of a transcription
accessory factor called Tex, which has been characterized
in Bordetella pertussis and Pseudomonas aeruginosa. The
tex gene is essential in Bortella pertusis and is named
for its role in toxin expression; Region: S1_Tex; cd05685"
/db_xref="CDD:240190"
misc_feature complement(order(374002..374004,374008..374010,
374038..374040,374062..374064))
/locus_tag="ECBD_0338"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:240190"
gene complement(376135..376611)
/gene="greB"
/locus_tag="ECBD_0339"
/db_xref="GeneID:8155945"
CDS complement(376135..376611)
/gene="greB"
/locus_tag="ECBD_0339"
/inference="protein motif:TFAM:TIGR01461"
/note="necessary for efficient RNA polymerase
transcription elongation past template-encoded arresting
sites; arresting sites in DNA have the property of
trapping a certain fraction of elongating RNA polymerases
that pass through, resulting in locked ternary complexes.
Cleavage of the nascent transcript by cleavage factors
such as GreA or GreB allows the resumption of elongation
from the new 3'terminus"
/codon_start=1
/transl_table=11
/product="transcription elongation factor GreB"
/protein_id="YP_003034596.1"
/db_xref="GI:253771765"
/db_xref="InterPro:IPR001437"
/db_xref="InterPro:IPR006358"
/db_xref="GeneID:8155945"
/translation="MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSE
NADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR
FRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP"
misc_feature complement(376144..376611)
/gene="greB"
/locus_tag="ECBD_0339"
/note="transcription elongation factor GreB; Reviewed;
Region: greB; PRK01885"
/db_xref="CDD:179345"
misc_feature complement(376390..376596)
/gene="greB"
/locus_tag="ECBD_0339"
/note="Transcription elongation factor, N-terminal;
Region: GreA_GreB_N; pfam03449"
/db_xref="CDD:217565"
misc_feature complement(376147..376374)
/gene="greB"
/locus_tag="ECBD_0339"
/note="Transcription elongation factor, GreA/GreB, C-term;
Region: GreA_GreB; pfam01272"
/db_xref="CDD:201702"
gene 376839..377558
/gene="ompR"
/locus_tag="ECBD_0340"
/db_xref="GeneID:8155946"
CDS 376839..377558
/gene="ompR"
/locus_tag="ECBD_0340"
/inference="protein motif:PFAM:PF00072"
/note="part of two-component system EnvZ/OmpR; regulates
transcription of outer membrane porin genes ompC/F; under
high osmolarity EnvZ functions as
kinase/phosphotransferase and phosphorylates OmpR; the
result is increased expression of ompC and repression of
ompF; also functions in regulation of other genes; forms
dimers upon phosphorylation"
/codon_start=1
/transl_table=11
/product="osmolarity response regulator"
/protein_id="YP_003034597.1"
/db_xref="GI:253771766"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:8155946"
/translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
LTSGEFAVLKALVSHPREPLSRYKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
PRYIQTVWGLGYVFVPDGSKA"
misc_feature 376839..377552
/gene="ompR"
/locus_tag="ECBD_0340"
/note="osmolarity response regulator; Provisional; Region:
ompR; PRK09468"
/db_xref="CDD:181883"
misc_feature 376860..377198
/gene="ompR"
/locus_tag="ECBD_0340"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature order(376869..376874,377001..377003,377025..377027,
377085..377087,377142..377144,377151..377156)
/gene="ompR"
/locus_tag="ECBD_0340"
/note="active site"
/db_xref="CDD:238088"
misc_feature 377001..377003
/gene="ompR"
/locus_tag="ECBD_0340"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature order(377010..377015,377019..377027)
/gene="ompR"
/locus_tag="ECBD_0340"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature 377151..377159
/gene="ompR"
/locus_tag="ECBD_0340"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature 377250..377534
/gene="ompR"
/locus_tag="ECBD_0340"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:238225"
misc_feature order(377322..377324,377379..377384,377436..377438,
377445..377447,377469..377474,377508..377510,
377523..377525)
/gene="ompR"
/locus_tag="ECBD_0340"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238225"
gene 377555..378907
/gene="envZ"
/locus_tag="ECBD_0341"
/db_xref="GeneID:8155947"
CDS 377555..378907
/gene="envZ"
/locus_tag="ECBD_0341"
/inference="protein motif:PFAM:PF02518"
/note="membrane-localized osmosensor; histidine kinase; in
high osmolarity EnvZ autophosphorylates itself and
transfers phosphoryl group to OmpR"
/codon_start=1
/transl_table=11
/product="osmolarity sensor protein"
/protein_id="YP_003034598.1"
/db_xref="GI:253771767"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:8155947"
/translation="MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQ
QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA
QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEE
CNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP
LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVR
GDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
"
sig_peptide 377555..377647
/gene="envZ"
/locus_tag="ECBD_0341"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.996) with cleavage site probability 0.543 at
residue 31"
misc_feature 377564..378871
/gene="envZ"
/locus_tag="ECBD_0341"
/note="osmolarity sensor protein; Provisional; Region:
envZ; PRK09467"
/db_xref="CDD:236531"
misc_feature 378104..378241
/gene="envZ"
/locus_tag="ECBD_0341"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature order(378110..378115,378119..378124,378131..378136,
378140..378142,378188..378193,378197..378202,
378209..378214,378218..378223,378230..378235)
/gene="envZ"
/locus_tag="ECBD_0341"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature 378254..378421
/gene="envZ"
/locus_tag="ECBD_0341"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(378263..378265,378275..378277,378287..378289,
378296..378298,378308..378310,378317..378319,
378350..378352,378362..378364,378371..378373,
378383..378385,378392..378394,378404..378406)
/gene="envZ"
/locus_tag="ECBD_0341"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 378281..378283
/gene="envZ"
/locus_tag="ECBD_0341"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 378608..378862
/gene="envZ"
/locus_tag="ECBD_0341"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature order(378665..378667,378671..378673,378677..378679,
378683..378688,378761..378772,378818..378820,
378824..378826,378839..378844,378848..378850)
/gene="envZ"
/locus_tag="ECBD_0341"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature order(378677..378679,378683..378685,378761..378763,
378767..378769)
/gene="envZ"
/locus_tag="ECBD_0341"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene complement(378983..380605)
/locus_tag="ECBD_0342"
/db_xref="GeneID:8155948"
CDS complement(378983..380605)
/locus_tag="ECBD_0342"
/EC_number="4.1.1.49"
/inference="protein motif:TFAM:TIGR00224"
/note="PEP carboxykinase; PEP carboxylase; PEPCK;
catalyzes the phosphorylation and decarboxylation of
oxaloacetate to form phosphoenolpyruvate using ATP"
/codon_start=1
/transl_table=11
/product="phosphoenolpyruvate carboxykinase"
/protein_id="YP_003034599.1"
/db_xref="GI:253771768"
/db_xref="InterPro:IPR001272"
/db_xref="InterPro:IPR015994"
/db_xref="GeneID:8155948"
/translation="MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGY
ERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETW
QHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEEL
AGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSM
MNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDD
GVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRV
SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLA
GTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRI
SIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQE
KAETLAKLFIDNFDKYTDTPAGAALVAAGPKL"
misc_feature complement(378995..380545)
/locus_tag="ECBD_0342"
/note="Phosphoenolpyruvate carboxykinase (PEPCK), a
critical gluconeogenic enzyme, catalyzes the first
committed step in the diversion of tricarboxylic acid
cycle intermediates toward gluconeogenesis. It catalyzes
the reversible decarboxylation and...; Region: PEPCK_ATP;
cd00484"
/db_xref="CDD:238270"
misc_feature complement(379127..380542)
/locus_tag="ECBD_0342"
/note="Phosphoenolpyruvate carboxykinase; Region:
PEPCK_ATP; pfam01293"
/db_xref="CDD:216417"
misc_feature complement(order(379241..379243,379250..379252,
379259..379261,379607..379609,379715..379717,
379742..379744,379748..379750,379799..379804,
379838..379858,379910..379912,379967..379972,
379979..379981,379985..379987,380411..380413))
/locus_tag="ECBD_0342"
/note="active site"
/db_xref="CDD:238270"
misc_feature complement(order(379607..379609,379748..379750,
379967..379972,379979..379981,379985..379987,
380411..380413))
/locus_tag="ECBD_0342"
/note="substrate-binding site [chemical binding]; other
site"
/db_xref="CDD:238270"
misc_feature complement(order(379748..379750,379799..379804,
379841..379843,379910..379912,379967..379969))
/locus_tag="ECBD_0342"
/note="metal-binding site [ion binding]"
/db_xref="CDD:238270"
misc_feature complement(order(379241..379243,379259..379261,
379715..379717,379838..379858))
/locus_tag="ECBD_0342"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238270"
gene 380850..380978
/locus_tag="ECBD_0343"
/db_xref="GeneID:8155949"
CDS 380850..380978
/locus_tag="ECBD_0343"
/inference="similar to AA sequence:KEGG:SbBS512_E3781"
/note="KEGG: sbc:SbBS512_E3781 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034600.1"
/db_xref="GI:253771769"
/db_xref="InterPro:IPR002052"
/db_xref="GeneID:8155949"
/translation="MKLMQIQPVKYRFTTLTFFDYFLKKAKYYCPDAIINPPFDSG"
gene 380984..382708
/locus_tag="ECBD_0344"
/db_xref="GeneID:8155950"
CDS 380984..382708
/locus_tag="ECBD_0344"
/inference="similar to AA sequence:KEGG:SbBS512_E3780"
/note="KEGG: sbc:SbBS512_E3780 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034601.1"
/db_xref="GI:253771770"
/db_xref="GeneID:8155950"
/translation="MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGV
PATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWD
FGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLL
LWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIA
TGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASL
PWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGY
FVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKN
TSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKV
LADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAF
NDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGE
RLNVNLNE"
misc_feature 381491..382153
/locus_tag="ECBD_0344"
/note="Domain of unknown function (DUF4153); Region:
DUF4153; pfam13687"
/db_xref="CDD:222319"
gene complement(382771..383649)
/gene="hslO"
/locus_tag="ECBD_0345"
/db_xref="GeneID:8155951"
CDS complement(382771..383649)
/gene="hslO"
/locus_tag="ECBD_0345"
/inference="protein motif:PFAM:PF01430"
/note="becomes active under oxidative stress; four
conserved cysteines bind a zinc atom when they are in the
reduced state and the enzyme is inactive; oxidative stress
results in oxidized cysteines, release of zinc, and
binding of Hsp33 to aggregation-prone proteins; forms
dimers and higher order oligomers"
/codon_start=1
/transl_table=11
/product="Hsp33-like chaperonin"
/protein_id="YP_003034602.1"
/db_xref="GI:253771771"
/db_xref="InterPro:IPR000397"
/db_xref="GeneID:8155951"
/translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNV
LAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENA
DLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGD
VDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEV
TVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMD
IAEIRNNASPADPQVH"
misc_feature complement(382795..383643)
/gene="hslO"
/locus_tag="ECBD_0345"
/note="Hsp33-like chaperonin; Reviewed; Region: hslO;
PRK00114"
/db_xref="CDD:234643"
misc_feature complement(382831..383631)
/gene="hslO"
/locus_tag="ECBD_0345"
/note="Heat shock protein 33 (Hsp33): Cytosolic protein
that acts as a molecular chaperone under oxidative
conditions. In normal (reducing) cytosolic conditions,
four conserved Cys residues are coordinated by a Zn ion.
Under oxidative stress (such as heat...; Region: Hsp33;
cd00498"
/db_xref="CDD:238278"
misc_feature complement(order(382960..382962,383131..383133,
383203..383211,383221..383223,383596..383598))
/gene="hslO"
/locus_tag="ECBD_0345"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238278"
misc_feature complement(order(383122..383133,383143..383145,
383149..383151,383596..383598))
/gene="hslO"
/locus_tag="ECBD_0345"
/note="domain crossover interface; other site"
/db_xref="CDD:238278"
misc_feature complement(order(382852..382854,382861..382863,
382954..382956,382960..382962))
/gene="hslO"
/locus_tag="ECBD_0345"
/note="redox-dependent activation switch; other site"
/db_xref="CDD:238278"
gene complement(383674..384075)
/locus_tag="ECBD_0346"
/db_xref="GeneID:8155952"
CDS complement(383674..384075)
/locus_tag="ECBD_0346"
/inference="protein motif:PFAM:PF01479"
/note="PFAM: RNA-binding S4 domain protein;
SMART: RNA-binding S4 domain protein;
KEGG: sdy:SDY_3678 ribosome-associated heat shock protein
HSP15"
/codon_start=1
/transl_table=11
/product="ribosome-associated heat shock protein Hsp15"
/protein_id="YP_003034603.1"
/db_xref="GI:253771772"
/db_xref="InterPro:IPR002942"
/db_xref="GeneID:8155952"
/translation="MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALAR
KLNALTMPHPDRRPDKKERRDLLRFKHGDSE"
misc_feature complement(383869..384051)
/locus_tag="ECBD_0346"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:238095"
misc_feature complement(order(383926..383928,383932..383949,
383950..383952,383971..383973,383977..383982,
383989..383994,383998..384003,384007..384012,
384046..384048))
/locus_tag="ECBD_0346"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:238095"
gene complement(384086..384754)
/locus_tag="ECBD_0347"
/db_xref="GeneID:8155953"
CDS complement(384086..384754)
/locus_tag="ECBD_0347"
/inference="protein motif:TFAM:TIGR01509"
/note="TIGRFAM: HAD-superfamily hydrolase, subfamily IA,
variant 3;
PFAM: haloacid dehalogenase;
KEGG: sfv:SFV_3404 phosphatase"
/codon_start=1
/transl_table=11
/product="HAD-superfamily hydrolase, subfamily IA, variant
3"
/protein_id="YP_003034604.1"
/db_xref="GI:253771773"
/db_xref="InterPro:IPR005833"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006402"
/db_xref="GeneID:8155953"
/translation="MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNG
VTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFL
EALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLI
PSLM"
misc_feature complement(384182..384721)
/locus_tag="ECBD_0347"
/note="haloacid dehalogenase superfamily, subfamily IA,
variant 3 with third motif having DD or ED; Region:
HAD-SF-IA-v3; TIGR01509"
/db_xref="CDD:233443"
misc_feature complement(384191..384475)
/locus_tag="ECBD_0347"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature complement(384407..384409)
/locus_tag="ECBD_0347"
/note="motif II; other site"
/db_xref="CDD:119389"
gene complement(384819..386942)
/locus_tag="ECBD_0348"
/db_xref="GeneID:8155954"
CDS complement(384819..386942)
/locus_tag="ECBD_0348"
/inference="protein motif:PFAM:PF07095"
/note="PFAM: Intracellular growth attenuator IgaA;
KEGG: sfv:SFV_3403 dehydrogenase"
/codon_start=1
/transl_table=11
/product="Intracellular growth attenuator IgaA"
/protein_id="YP_003034605.1"
/db_xref="GI:253771774"
/db_xref="InterPro:IPR010771"
/db_xref="GeneID:8155954"
/translation="MIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPE
ERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPN
KWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRGYAL
QPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLIT
PDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINN
ISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWL
RSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTL
RISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAV
NRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALV
NLGNSKDWDALVKRANTGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARAAQSL
NSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIV
TKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTR
MMEIQAYYESCLNPQLITPSESLIE"
misc_feature complement(384840..386891)
/locus_tag="ECBD_0348"
/note="Intracellular growth attenuator protein IgaA;
Region: IgaA; pfam07095"
/db_xref="CDD:219294"
gene complement(386951..387070)
/locus_tag="ECBD_0349"
/db_xref="GeneID:8155955"
CDS complement(386951..387070)
/locus_tag="ECBD_0349"
/inference="similar to AA sequence:KEGG:SbBS512_E3775"
/note="KEGG: sbc:SbBS512_E3775 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034606.1"
/db_xref="GI:253771775"
/db_xref="GeneID:8155955"
/translation="MCLMMLKLNSTLADSQPQNHVLCLVRLTTPDRLSKMGKA"
gene 387274..387834
/gene="nudE"
/locus_tag="ECBD_0350"
/db_xref="GeneID:8155956"
CDS 387274..387834
/gene="nudE"
/locus_tag="ECBD_0350"
/inference="protein motif:PFAM:PF00293"
/note="ADP-sugar pyrophosphatase; catalyzes the formation
of D-ribose 5-phosphate from ADP-ribose; can also act on
ADP-mannose and ADP-glucose"
/codon_start=1
/transl_table=11
/product="ADP-ribose diphosphatase NudE"
/protein_id="YP_003034607.1"
/db_xref="GI:253771776"
/db_xref="InterPro:IPR000086"
/db_xref="GeneID:8155956"
/translation="MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRP
TNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF
GANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLE
DPDFNEARNVSALFLVREWLKGQGRV"
misc_feature 387274..387825
/gene="nudE"
/locus_tag="ECBD_0350"
/note="adenosine nucleotide hydrolase NudE; Provisional;
Region: nudE; PRK11762"
/db_xref="CDD:183303"
misc_feature 387418..387810
/gene="nudE"
/locus_tag="ECBD_0350"
/note="ADP-ribose pyrophosphatase (ADPRase) catalyzes the
hydrolysis of ADP-ribose and a variety of additional
ADP-sugar conjugates to AMP and ribose-5-phosphate. Like
other members of the Nudix hydrolase superfamily, it
requires a divalent cation, such as Mg2+; Region:
ADPRase_NUDT5; cd03424"
/db_xref="CDD:239516"
misc_feature order(387418..387420,387472..387474,387514..387516,
387556..387558,387568..387570,387637..387639)
/gene="nudE"
/locus_tag="ECBD_0350"
/note="ADP-ribose binding site [chemical binding]; other
site"
/db_xref="CDD:239516"
misc_feature order(387463..387465,387469..387471,387475..387477,
387490..387492,387607..387618,387622..387624,
387628..387642,387700..387705,387709..387711,
387748..387753,387772..387774,387784..387786,
387793..387795,387805..387810)
/gene="nudE"
/locus_tag="ECBD_0350"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:239516"
misc_feature order(387472..387474,387508..387516,387556..387558,
387568..387570,387637..387639,387700..387702)
/gene="nudE"
/locus_tag="ECBD_0350"
/note="active site"
/db_xref="CDD:239516"
misc_feature order(387511..387522,387526..387579)
/gene="nudE"
/locus_tag="ECBD_0350"
/note="nudix motif; other site"
/db_xref="CDD:239516"
misc_feature order(387556..387558,387568..387570,387700..387702)
/gene="nudE"
/locus_tag="ECBD_0350"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:239516"
gene complement(388002..390554)
/gene="mrcA"
/locus_tag="ECBD_0351"
/db_xref="GeneID:8155957"
CDS complement(388002..390554)
/gene="mrcA"
/locus_tag="ECBD_0351"
/EC_number="2.4.1.129"
/inference="protein motif:TFAM:TIGR02074"
/note="bifunctional murein transglycosylase/murein
transpeptidase; penicillin-binding protein 1A; involved in
the synthesis of cross-linked peptidoglycan from the lipid
intermediates in cell wall formation;
penicillin-insensitive transglycosylase catalyzes the
formation of linear glycan strands and the
penicillin-sensitive transpeptidase catalyzes the
cross-linking of the peptide subunits"
/codon_start=1
/transl_table=11
/product="peptidoglycan synthetase"
/protein_id="YP_003034608.1"
/db_xref="GI:253771777"
/db_xref="InterPro:IPR001264"
/db_xref="InterPro:IPR001460"
/db_xref="InterPro:IPR011816"
/db_xref="GeneID:8155957"
/translation="MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL
QIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIF
RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEIL
ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRA
VARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRY
GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNN
KITDTLKALPTYGPLLPAAVTSANPQQATAMLADGSTVALSMEGVRWARPYRSDTQQG
PTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQ
SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWQPKNSP
PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
SFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDT
QKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFL
IKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW
IGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
IVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF"
misc_feature complement(388005..390554)
/gene="mrcA"
/locus_tag="ECBD_0351"
/note="penicillin-binding protein 1a; Provisional; Region:
mrcA; PRK11636"
/db_xref="CDD:183248"
sig_peptide complement(390480..390554)
/gene="mrcA"
/locus_tag="ECBD_0351"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.863) with cleavage site probability 0.697 at
residue 25"
misc_feature complement(389865..390395)
/gene="mrcA"
/locus_tag="ECBD_0351"
/note="Transglycosylase; Region: Transgly; pfam00912"
/db_xref="CDD:201501"
misc_feature complement(<388764..389273)
/gene="mrcA"
/locus_tag="ECBD_0351"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; cl17760"
/db_xref="CDD:248314"
gene 390674..391453
/locus_tag="ECBD_0352"
/db_xref="GeneID:8155958"
CDS 390674..391453
/locus_tag="ECBD_0352"
/inference="similar to AA sequence:KEGG:SSON_3526"
/note="KEGG: ssn:SSON_3526 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034609.1"
/db_xref="GI:253771778"
/db_xref="GeneID:8155958"
/translation="MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDII
KDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWL
SGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD
ASALQRFLPFLPSHQQCLAWRDNEQWLWATRYRWGRKLAVGMTSAKELAAALSVDPES
VAICGEGGFDPWEAVSVRQPPLPPSGGDFAIALGLALGKAY"
misc_feature 390716..>390964
/locus_tag="ECBD_0352"
/note="Tfp pilus assembly protein, ATPase PilM [Cell
motility and secretion / Intracellular trafficking and
secretion]; Region: PilM; COG4972"
/db_xref="CDD:227306"
gene 391453..391992
/locus_tag="ECBD_0353"
/db_xref="GeneID:8155959"
CDS 391453..391992
/locus_tag="ECBD_0353"
/inference="protein motif:PFAM:PF05137"
/note="PFAM: fimbrial assembly family protein;
KEGG: sfl:SF3412 hypothetical protein"
/codon_start=1
/transl_table=11
/product="fimbrial assembly family protein"
/protein_id="YP_003034610.1"
/db_xref="GI:253771779"
/db_xref="InterPro:IPR007813"
/db_xref="GeneID:8155959"
/translation="MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTG
SAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEAL
AALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQ
GRWQFEYQLTRKVSDEHVL"
misc_feature 391453..391989
/locus_tag="ECBD_0353"
/note="Tfp pilus assembly protein PilN [Cell motility and
secretion / Intracellular trafficking and secretion];
Region: PilN; COG3166"
/db_xref="CDD:225707"
sig_peptide 391453..391599
/locus_tag="ECBD_0353"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.937) with cleavage site probability 0.501 at
residue 49"
misc_feature <391789..391965
/locus_tag="ECBD_0353"
/note="Fimbrial assembly protein (PilN); Region: PilN;
pfam05137"
/db_xref="CDD:218459"
gene 391976..392416
/locus_tag="ECBD_0354"
/db_xref="GeneID:8155960"
CDS 391976..392416
/locus_tag="ECBD_0354"
/inference="similar to AA sequence:KEGG:SFV_3398"
/note="KEGG: sfv:SFV_3398 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034611.1"
/db_xref="GI:253771780"
/db_xref="GeneID:8155960"
/translation="MNMFFDWWFATSPRLRQLCWAVWLLMLVTLIFLSSTHHEERDAL
IRLRASHHQQWAALYRLVDTTPFSEEKTLPFSPLDFQLSGAQLVSWHPSAQGGELALK
TLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG"
gene 392406..392810
/locus_tag="ECBD_0355"
/db_xref="GeneID:8155961"
CDS 392406..392810
/locus_tag="ECBD_0355"
/inference="similar to AA sequence:KEGG:SDY_3687"
/note="KEGG: sdy:SDY_3687 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034612.1"
/db_xref="GI:253771781"
/db_xref="GeneID:8155961"
/translation="MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMV
GRGEHIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDALTLGTGTNCEPPQWLWQRQ
GDTNEAMDSRTTVDADTRRTGGKAAKSDADGG"
misc_feature 392409..392771
/locus_tag="ECBD_0355"
/note="Protein of unknown function (DUF2531); Region:
DUF2531; pfam10748"
/db_xref="CDD:220868"
sig_peptide 392721..392780
/locus_tag="ECBD_0355"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.685 at
residue 19"
gene 392722..393960
/gene="hofQ"
/locus_tag="ECBD_0356"
/db_xref="GeneID:8155962"
CDS 392722..393960
/gene="hofQ"
/locus_tag="ECBD_0356"
/inference="protein motif:TFAM:TIGR02515"
/note="outer membrane porin probably involved in uptake of
extracellular double-stranded DNA; similar to outer
membrane competence protein ComE from Haemophilus
influenzae and outer membrane protein PilQ involved in
type IV pilus production from Pseudomonas aeruginosa"
/codon_start=1
/transl_table=11
/product="outer membrane porin HofQ"
/protein_id="YP_003034613.1"
/db_xref="GI:253771782"
/db_xref="InterPro:IPR001775"
/db_xref="InterPro:IPR001814"
/db_xref="InterPro:IPR003522"
/db_xref="InterPro:IPR004845"
/db_xref="InterPro:IPR004846"
/db_xref="InterPro:IPR005644"
/db_xref="InterPro:IPR011662"
/db_xref="InterPro:IPR013355"
/db_xref="GeneID:8155962"
/translation="MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQE
KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEDNILSVHSIAWQNNNIA
RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN
KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT
LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK
QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA
DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG
KEDERRELVVFITPRLVSSE"
misc_feature 392800..393957
/gene="hofQ"
/locus_tag="ECBD_0356"
/note="outer membrane porin HofQ; Provisional; Region:
hofQ; PRK10560"
/db_xref="CDD:182549"
misc_feature 393079..393252
/gene="hofQ"
/locus_tag="ECBD_0356"
/note="Bacterial type II/III secretion system short
domain; Region: Secretin_N; pfam03958"
/db_xref="CDD:217815"
misc_feature 393469..393951
/gene="hofQ"
/locus_tag="ECBD_0356"
/note="Bacterial type II and III secretion system protein;
Region: Secretin; pfam00263"
/db_xref="CDD:215826"
gene 394205..394882
/gene="aroK"
/locus_tag="ECBD_0357"
/db_xref="GeneID:8155963"
CDS 394205..394882
/gene="aroK"
/locus_tag="ECBD_0357"
/EC_number="2.7.1.71"
/inference="protein motif:PRIAM:2.7.1.71"
/note="type I enzyme similar to type II but differentially
regulated; major shikimate kinase in fully repressed
cells; catalyzes the formation of shikimate 3-phosphate
from shikimate in aromatic amino acid biosynthesis"
/codon_start=1
/transl_table=11
/product="shikimate kinase I"
/protein_id="YP_003034614.1"
/db_xref="GI:253771783"
/db_xref="InterPro:IPR000623"
/db_xref="GeneID:8155963"
/translation="MGDLFSCQTRWSIEIIFSLTLAISYEVSVHVLRRSLSEAGLSLT
NSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWV
FDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE
KQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQI
IHMLESN"
misc_feature 394361..394876
/gene="aroK"
/locus_tag="ECBD_0357"
/note="shikimate kinase; Reviewed; Region: aroK; PRK00131"
/db_xref="CDD:234654"
misc_feature 394376..394834
/gene="aroK"
/locus_tag="ECBD_0357"
/note="Shikimate kinase (SK) is the fifth enzyme in the
shikimate pathway, a seven-step biosynthetic pathway which
converts erythrose-4-phosphate to chorismic acid, found in
bacteria, fungi and plants. Chorismic acid is a important
intermediate in the synthesis...; Region: SK; cd00464"
/db_xref="CDD:238260"
misc_feature order(394400..394417,394697..394699,394718..394720)
/gene="aroK"
/locus_tag="ECBD_0357"
/note="ADP binding site [chemical binding]; other site"
/db_xref="CDD:238260"
misc_feature order(394412..394414,394460..394462,394466..394468)
/gene="aroK"
/locus_tag="ECBD_0357"
/note="magnesium binding site [ion binding]; other site"
/db_xref="CDD:238260"
misc_feature order(394466..394468,394538..394540,394547..394549,
394601..394609,394778..394780)
/gene="aroK"
/locus_tag="ECBD_0357"
/note="putative shikimate binding site; other site"
/db_xref="CDD:238260"
gene 394939..396027
/gene="aroB"
/locus_tag="ECBD_0358"
/db_xref="GeneID:8155964"
CDS 394939..396027
/gene="aroB"
/locus_tag="ECBD_0358"
/inference="protein motif:TFAM:TIGR01357"
/note="catalyzes the formation of 3-dehydroquinate from
3-deoxy-arabino-heptulonate 7-phosphate; functions in
aromatic amino acid biosynthesis"
/codon_start=1
/transl_table=11
/product="3-dehydroquinate synthase"
/protein_id="YP_003034615.1"
/db_xref="GI:253771784"
/db_xref="InterPro:IPR002658"
/db_xref="InterPro:IPR016037"
/db_xref="GeneID:8155964"
/translation="MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNET
LAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVAL
GGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP
ASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYC
IRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA
RTSERLGQFSSAETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEIRLIL
PLAIGKSEVRSGVSHELVLNAIADCQSA"
misc_feature 394972..396006
/gene="aroB"
/locus_tag="ECBD_0358"
/note="Dehydroquinate synthase (DHQS) catalyzes the
conversion of DAHP to DHQ in shikimate pathway for
aromatic compounds synthesis; Region: DHQS; cd08195"
/db_xref="CDD:173954"
misc_feature order(395062..395064,395248..395256,395263..395265,
395272..395274,395323..395328,395332..395334,
395389..395391,395398..395400,395443..395445,
395467..395469,395488..395490,395500..395502,
395677..395679,395689..395691,395728..395730)
/gene="aroB"
/locus_tag="ECBD_0358"
/note="active site"
/db_xref="CDD:173954"
misc_feature order(395170..395172,395191..395196,395275..395277,
395284..395286,395290..395298,395362..395367,
395392..395409)
/gene="aroB"
/locus_tag="ECBD_0358"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:173954"
misc_feature order(395488..395490,395677..395679,395728..395730)
/gene="aroB"
/locus_tag="ECBD_0358"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:173954"
gene 396119..397405
/locus_tag="ECBD_0359"
/db_xref="GeneID:8155965"
CDS 396119..397405
/locus_tag="ECBD_0359"
/inference="protein motif:PFAM:PF05036"
/note="PFAM: sporulation domain protein;
KEGG: sbo:SBO_3375 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034616.1"
/db_xref="GI:253771785"
/db_xref="InterPro:IPR007730"
/db_xref="GeneID:8155965"
/translation="MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDI
ELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQ
YMMMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPG
TTSAENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVA
VNSTLPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEP
KPVAQTPKRTEPAAPVASTKAPAATSAPAPKETATTAPVQTASPAQTTATPAAGGKTA
GNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGV
YASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK"
misc_feature 396422..397402
/locus_tag="ECBD_0359"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: DamX; COG3266"
/db_xref="CDD:225805"
misc_feature 396482..397402
/locus_tag="ECBD_0359"
/note="cell division protein DamX; Validated; Region:
PRK10905"
/db_xref="CDD:236792"
gene 397512..398348
/locus_tag="ECBD_0360"
/db_xref="GeneID:8155966"
CDS 397512..398348
/locus_tag="ECBD_0360"
/EC_number="2.1.1.72"
/inference="protein motif:TFAM:TIGR00571"
/note="KEGG: sbc:SbBS512_E3764 DNA adenine methylase;
TIGRFAM: DNA adenine methylase;
PFAM: D12 class N6 adenine-specific DNA methyltransferase"
/codon_start=1
/transl_table=11
/product="DNA adenine methylase"
/protein_id="YP_003034617.1"
/db_xref="GI:253771786"
/db_xref="InterPro:IPR002052"
/db_xref="InterPro:IPR002294"
/db_xref="InterPro:IPR012326"
/db_xref="InterPro:IPR012327"
/db_xref="GeneID:8155966"
/translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN
TDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQ
DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF
YCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE
RHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPA
KK"
misc_feature 397512..398324
/locus_tag="ECBD_0360"
/note="DNA adenine methylase; Provisional; Region:
PRK10904"
/db_xref="CDD:182825"
gene 398366..399043
/locus_tag="ECBD_0361"
/db_xref="GeneID:8155967"
CDS 398366..399043
/locus_tag="ECBD_0361"
/EC_number="5.1.3.1"
/inference="protein motif:TFAM:TIGR01163"
/note="catalyzes the interconversion of D-ribulose
5-phosphate to xylulose 5-phosphate"
/codon_start=1
/transl_table=11
/product="ribulose-phosphate 3-epimerase"
/protein_id="YP_003034618.1"
/db_xref="GI:253771787"
/db_xref="InterPro:IPR000056"
/db_xref="GeneID:8155967"
/translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
NLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT
LQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
VRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSE
LAKVSHE"
misc_feature 398378..399013
/locus_tag="ECBD_0361"
/note="Ribulose-5-phosphate 3-epimerase (RPE). This enzyme
catalyses the interconversion of D-ribulose 5-phosphate
(Ru5P) into D-xylulose 5-phosphate, as part of the Calvin
cycle (reductive pentose phosphate pathway) in
chloroplasts and in the oxidative pentose...; Region: RPE;
cd00429"
/db_xref="CDD:238244"
misc_feature 398381..399013
/locus_tag="ECBD_0361"
/note="ribulose-phosphate 3-epimerase; Region: rpe;
TIGR01163"
/db_xref="CDD:130231"
misc_feature order(398390..398392,398396..398398,398471..398473,
398573..398575,398792..398797,398801..398806,
398894..398896,398900..398902,398960..398965)
/locus_tag="ECBD_0361"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238244"
misc_feature order(398411..398413,398420..398422,398480..398482,
398486..398491,398495..398497,398501..398512,
398582..398584,398594..398596,398657..398659,
398663..398668,398720..398722,398729..398731,
398735..398737,398747..398749,398789..398791,
398816..398818,398822..398824,398834..398836)
/locus_tag="ECBD_0361"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:238244"
misc_feature order(398465..398467,398471..398473,398567..398569,
398894..398896)
/locus_tag="ECBD_0361"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238244"
gene 399036..399794
/locus_tag="ECBD_0362"
/db_xref="GeneID:8155968"
CDS 399036..399794
/locus_tag="ECBD_0362"
/inference="protein motif:TFAM:TIGR01449"
/note="catalyzes the dephosphorylation of
2-phosphoglycolate to form glycolate and phosphate"
/codon_start=1
/transl_table=11
/product="phosphoglycolate phosphatase"
/protein_id="YP_003034619.1"
/db_xref="GI:253771788"
/db_xref="InterPro:IPR005833"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006346"
/db_xref="InterPro:IPR006402"
/db_xref="InterPro:IPR006439"
/db_xref="GeneID:8155968"
/translation="MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEE
RVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDDDIPAEEQVRILRKLFDRYY
GEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGG
DDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
AIDLSQPDVIYQSINDLLPALGLPHSENQESKND"
misc_feature 399039..399767
/locus_tag="ECBD_0362"
/note="phosphoglycolate phosphatase; Provisional; Region:
PRK13222"
/db_xref="CDD:237310"
misc_feature 399324..399662
/locus_tag="ECBD_0362"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature 399435..399437
/locus_tag="ECBD_0362"
/note="motif II; other site"
/db_xref="CDD:119389"
gene 399787..400791
/locus_tag="ECBD_0363"
/db_xref="GeneID:8155969"
CDS 399787..400791
/locus_tag="ECBD_0363"
/EC_number="6.1.1.2"
/inference="protein motif:TFAM:TIGR00233"
/note="catalyzes a two-step reaction, first charging a
tryptophan molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="tryptophanyl-tRNA synthetase"
/protein_id="YP_003034620.1"
/db_xref="GI:253771789"
/db_xref="InterPro:IPR001412"
/db_xref="InterPro:IPR002305"
/db_xref="InterPro:IPR002306"
/db_xref="GeneID:8155969"
/translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
HAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
AQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
KIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE
VADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASAHASRTLKAVYEAIGFVAKP
"
misc_feature 399790..400773
/locus_tag="ECBD_0363"
/note="tryptophanyl-tRNA synthetase II; Reviewed; Region:
PRK12282"
/db_xref="CDD:183400"
misc_feature 399799..400638
/locus_tag="ECBD_0363"
/note="catalytic core domain of tryptophanyl-tRNA
synthetase; Region: TrpRS_core; cd00806"
/db_xref="CDD:173903"
misc_feature order(399805..399819,399835..399837,399841..399846,
399853..399855,399904..399906,399919..399921,
400030..400032,400168..400170,400180..400182,
400189..400191,400216..400218,400222..400227,
400231..400236,400243..400245,400339..400341,
400369..400374,400378..400380)
/locus_tag="ECBD_0363"
/note="active site"
/db_xref="CDD:173903"
misc_feature 399835..399846
/locus_tag="ECBD_0363"
/note="HIGH motif; other site"
/db_xref="CDD:173903"
misc_feature order(399916..399918,399925..399930,400048..400053,
400057..400065,400072..400077,400081..400092,
400096..400101,400156..400158,400162..400167,
400174..400179)
/locus_tag="ECBD_0363"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:173903"
misc_feature 400369..400383
/locus_tag="ECBD_0363"
/note="KMSKS motif; other site"
/db_xref="CDD:173903"
gene 401081..401986
/locus_tag="ECBD_0364"
/db_xref="GeneID:8155970"
CDS 401081..401986
/locus_tag="ECBD_0364"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034621.1"
/db_xref="GI:253771790"
/db_xref="GeneID:8155970"
/translation="MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELANECRSSVG
LTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLTHVDINNVVCAMPLPYTRLYEG
LASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLTQKGLCLALE
LGPHTYVGEHQLICRKGESANVKRVGLDNRSADQKIMTDVFFGGSDVERVDLSYHESL
QRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLL
RAVVDKHALLAHQQRVVSGEQEPSY"
gene 402003..402365
/locus_tag="ECBD_0365"
/db_xref="GeneID:8155971"
CDS 402003..402365
/locus_tag="ECBD_0365"
/inference="similar to AA sequence:KEGG:SbBS512_E3759"
/note="KEGG: sbc:SbBS512_E3759 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034622.1"
/db_xref="GI:253771791"
/db_xref="GeneID:8155971"
/translation="METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTM
AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEE
GYLLANLYGLWMAANEEV"
misc_feature 402051..>402236
/locus_tag="ECBD_0365"
/note="PRD domain protein EF_0829/AHA_3910; Region:
EF_0829; TIGR03582"
/db_xref="CDD:132621"
gene 402449..403612
/locus_tag="ECBD_0366"
/db_xref="GeneID:8155972"
CDS 402449..403612
/locus_tag="ECBD_0366"
/inference="protein motif:PFAM:PF01168"
/note="PFAM: alanine racemase domain protein;
KEGG: sbc:SbBS512_E3758 alanine racemase family"
/codon_start=1
/transl_table=11
/product="alanine racemase domain protein"
/protein_id="YP_003034623.1"
/db_xref="GI:253771792"
/db_xref="InterPro:IPR001608"
/db_xref="GeneID:8155972"
/translation="MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKR
LIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQ
GHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRVQFVLLKVYSDDDFLY
PGQESGFVQHSLHEVVAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLIQAR
DQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQPERIA
MLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTL
PLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPEIVGRYDSLGNSLGA"
misc_feature 402449..403594
/locus_tag="ECBD_0366"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme yhfX; Region: PLPDE_III_yhfX_like; cd06811"
/db_xref="CDD:143486"
misc_feature order(402530..402532,402629..402631,402635..402637,
402698..402703,402707..402712,402728..402730,
402788..402790,402827..402829,402836..402838,
402848..402850,402932..402943,403298..403309,
403319..403321,403325..403327,403331..403333,
403340..403345,403565..403567)
/locus_tag="ECBD_0366"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143486"
misc_feature 402545..403609
/locus_tag="ECBD_0366"
/note="Predicted amino acid racemase [Amino acid transport
and metabolism]; Region: COG3457"
/db_xref="CDD:225988"
misc_feature order(402623..402625,402629..402631,402692..402694,
402767..402769,402899..402901,402935..402937,
403025..403027,403151..403156,403208..403219,
403340..403342)
/locus_tag="ECBD_0366"
/note="active site"
/db_xref="CDD:143486"
misc_feature order(402623..402625,402629..402631,402692..402694,
402767..402769,402899..402901,403025..403027,
403151..403156,403208..403219)
/locus_tag="ECBD_0366"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143486"
misc_feature order(402629..402631,402935..402937,403025..403027,
403217..403219)
/locus_tag="ECBD_0366"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143486"
misc_feature 402629..402631
/locus_tag="ECBD_0366"
/note="catalytic residue [active]"
/db_xref="CDD:143486"
gene 403612..404838
/locus_tag="ECBD_0367"
/db_xref="GeneID:8155973"
CDS 403612..404838
/locus_tag="ECBD_0367"
/EC_number="5.4.2.7"
/inference="protein motif:PRIAM:5.4.2.7"
/note="PFAM: phosphopentomutase domain protein;
metalloenzyme domain protein;
KEGG: elf:LF82_3289 uncharacterized protein YhfW"
/codon_start=1
/transl_table=11
/product="mutase"
/protein_id="YP_003034624.1"
/db_xref="GI:253771793"
/db_xref="InterPro:IPR006124"
/db_xref="InterPro:IPR013553"
/db_xref="GeneID:8155973"
/translation="MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQ
LPTLEKLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRM
PFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSV
ISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYD
NGFQVVHMGYGVDEKVQVPQKLYEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMD
ITLNEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVEAMQPDDCLV
VMADHGNDPTIGHSHHTREVVPVLVYQQGMIATQLGVRTTLSDVGATVCEFFRAPPPQ
NGRSFLSSLRFAGDTL"
misc_feature 403612..404829
/locus_tag="ECBD_0367"
/note="putative mutase; Provisional; Region: PRK12383"
/db_xref="CDD:237085"
misc_feature 403612..404817
/locus_tag="ECBD_0367"
/note="Phosphopentomutase [Carbohydrate transport and
metabolism]; Region: DeoB; COG1015"
/db_xref="CDD:223947"
gene 404835..405713
/locus_tag="ECBD_0368"
/db_xref="GeneID:8155974"
CDS 404835..405713
/locus_tag="ECBD_0368"
/inference="protein motif:PFAM:PF02126"
/note="phosphotriesterase homology protein; PhP; YhfV;
member of a family of proteins related to
phosphotriesterase (PTE)"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="YP_003034625.1"
/db_xref="GI:253771794"
/db_xref="InterPro:IPR001559"
/db_xref="InterPro:IPR017947"
/db_xref="GeneID:8155974"
/translation="MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLM
TRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELA
QEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTS
FSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYP
DEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQ
ADVDVMLRENPSQFFQ"
misc_feature 404835..405707
/locus_tag="ECBD_0368"
/note="Predicted metal-dependent hydrolases with the
TIM-barrel fold [General function prediction only];
Region: COG1099"
/db_xref="CDD:224024"
misc_feature 404853..405707
/locus_tag="ECBD_0368"
/note="Phosphotriesterase (PTE) catalyzes the hydrolysis
of organophosphate nerve agents, including the chemical
warfare agents VX, soman, and sarin as well as the
insecticide paraoxon. PTE exists as a homodimer with one
active site per monomer. The active site...; Region: PTE;
cd00530"
/db_xref="CDD:238295"
misc_feature order(404868..404870,404874..404876,405204..405206,
405306..405308,405390..405392,405561..405563)
/locus_tag="ECBD_0368"
/note="active site"
/db_xref="CDD:238295"
misc_feature order(404874..404876,405084..405086,405306..405308,
405561..405563)
/locus_tag="ECBD_0368"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:238295"
misc_feature order(404889..404891,405003..405005,405120..405122,
405132..405134,405153..405155,405174..405176)
/locus_tag="ECBD_0368"
/note="homodimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:238295"
gene 405724..406077
/locus_tag="ECBD_0369"
/db_xref="GeneID:8155975"
CDS 405724..406077
/locus_tag="ECBD_0369"
/inference="similar to AA sequence:KEGG:SFV_3383"
/note="KEGG: sfv:SFV_3383 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034626.1"
/db_xref="GI:253771795"
/db_xref="GeneID:8155975"
/translation="MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQ
LDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSV
EHVEHAIPMLINHLK"
misc_feature 405727..406074
/locus_tag="ECBD_0369"
/note="Protein of unknown function DUF2620; Region:
DUF2620; pfam10941"
/db_xref="CDD:151388"
gene 406089..407393
/locus_tag="ECBD_0370"
/db_xref="GeneID:8155976"
CDS 406089..407393
/locus_tag="ECBD_0370"
/inference="similar to AA sequence:KEGG:LF82_3287"
/note="KEGG: elf:LF82_3287 uncharacterized protein YhfT"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034627.1"
/db_xref="GI:253771796"
/db_xref="GeneID:8155976"
/translation="MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYM
NRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGA
IWGVLILTCLLPVNQLLTALPVDVLGSLGALSSPVVSAFALFPLVAIFYQFGWKQSLI
AAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVF
EERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLIN
QAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISA
EVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAV
AIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA"
sig_peptide 406089..406154
/locus_tag="ECBD_0370"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.615) with cleavage site probability 0.492 at
residue 22"
misc_feature 406101..407381
/locus_tag="ECBD_0370"
/note="Protein of unknown function; Region: YhfT;
pfam10797"
/db_xref="CDD:220877"
gene 407934..408209
/locus_tag="ECBD_0372"
/db_xref="GeneID:8155978"
CDS 407934..408209
/locus_tag="ECBD_0372"
/inference="protein motif:PFAM:PF03811"
/note="PFAM: Insertion element protein;
KEGG: hdu:HD1971 insertion element IS1 1/2/3/5/6 protein
InsA"
/codon_start=1
/transl_table=11
/product="Insertion element protein"
/protein_id="YP_003034628.1"
/db_xref="GI:253771797"
/db_xref="InterPro:IPR003220"
/db_xref="GeneID:8155978"
/translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR"
misc_feature 407934..408206
/locus_tag="ECBD_0372"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3677"
/db_xref="CDD:226202"
misc_feature 407934..408041
/locus_tag="ECBD_0372"
/note="InsA N-terminal domain; Region: Zn_Tnp_IS1;
pfam03811"
/db_xref="CDD:190760"
misc_feature 408048..408197
/locus_tag="ECBD_0372"
/note="InsA C-terminal domain; Region: HTH_Tnp_IS1;
pfam12759"
/db_xref="CDD:193235"
gene 408128..408631
/locus_tag="ECBD_0373"
/db_xref="GeneID:8155979"
CDS 408128..408631
/locus_tag="ECBD_0373"
/inference="protein motif:PFAM:PF03400"
/note="PFAM: IS1 transposase"
/codon_start=1
/transl_table=11
/product="IS1 transposase"
/protein_id="YP_003034629.1"
/db_xref="GI:253771798"
/db_xref="InterPro:IPR005063"
/db_xref="GeneID:8155979"
/translation="MPGNCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature 408236..408628
/locus_tag="ECBD_0373"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:112225"
gene complement(409420..410151)
/locus_tag="ECBD_0374"
/db_xref="GeneID:8155980"
CDS complement(409420..410151)
/locus_tag="ECBD_0374"
/inference="protein motif:PFAM:PF07702"
/note="may act as a transcriptional regulator of a
fructoselysine-induced operon containing the yhfM, yhfN,
yhfO, yhfP, yhfQ, and yhfR genes"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator FrlR"
/protein_id="YP_003034630.1"
/db_xref="GI:253771799"
/db_xref="InterPro:IPR000524"
/db_xref="InterPro:IPR011663"
/db_xref="GeneID:8155980"
/translation="MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQ
YNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATK
EKVIEQERVSAAPFCEKLNIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEI
YVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQN
DKPVHVSELFCRANRITLTIDNKRH"
misc_feature complement(409423..410145)
/locus_tag="ECBD_0374"
/note="DNA-binding transcriptional regulator FrlR;
Provisional; Region: PRK11402"
/db_xref="CDD:183118"
misc_feature complement(409927..410118)
/locus_tag="ECBD_0374"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature complement(order(409933..409944,409948..409953,
409981..409983,409990..409995,409999..410013,
410035..410040,410044..410046,410113..410115))
/locus_tag="ECBD_0374"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(409447..409866)
/locus_tag="ECBD_0374"
/note="UTRA domain; Region: UTRA; pfam07702"
/db_xref="CDD:219527"
gene complement(410251..411036)
/locus_tag="ECBD_0375"
/db_xref="GeneID:8155981"
CDS complement(410251..411036)
/locus_tag="ECBD_0375"
/inference="protein motif:PFAM:PF00294"
/note="PFAM: PfkB domain protein;
KEGG: sbc:SbBS512_E3751 kinase, PfkB family"
/codon_start=1
/transl_table=11
/product="fructoselysine 6-kinase"
/protein_id="YP_003034631.1"
/db_xref="GI:253771800"
/db_xref="InterPro:IPR002173"
/db_xref="InterPro:IPR011611"
/db_xref="GeneID:8155981"
/translation="MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCI
TWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADF
ALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHL
DFAFASAPQEDETLRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVID
TMGAGDSFIAGFLCGWSAGMTLPQAIAQGTACAAKTIQYHGAW"
misc_feature complement(410254..411030)
/locus_tag="ECBD_0375"
/note="Fructoselysine kinase-like. Fructoselysine is a
fructoseamine formed by glycation, a non-enzymatic
reaction of glucose with a primary amine followed by an
Amadori rearrangement, resulting in a protein that is
modified at the amino terminus and at the...; Region:
Fructoselysine_kinase_like; cd01940"
/db_xref="CDD:238915"
misc_feature complement(410257..411027)
/locus_tag="ECBD_0375"
/note="Sugar kinases, ribokinase family [Carbohydrate
transport and metabolism]; Region: RbsK; COG0524"
/db_xref="CDD:223598"
misc_feature complement(order(410365..410367,410374..410376,
410950..410952))
/locus_tag="ECBD_0375"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238915"
misc_feature complement(order(410284..410286,410293..410295,
410359..410361,410368..410373,410380..410382,
410461..410463,410539..410541))
/locus_tag="ECBD_0375"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238915"
gene complement(411033..411863)
/locus_tag="ECBD_0376"
/db_xref="GeneID:8155982"
CDS complement(411033..411863)
/locus_tag="ECBD_0376"
/inference="protein motif:PFAM:PF01261"
/note="YhfOP; YhfP; YhfO; FrlC; catalyzes the
interconversion of fructoselysine and psicoselysine"
/codon_start=1
/transl_table=11
/product="fructoselysine 3-epimerase"
/protein_id="YP_003034632.1"
/db_xref="GI:253771801"
/db_xref="InterPro:IPR012307"
/db_xref="GeneID:8155982"
/translation="MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDL
KAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEM
NAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCN
ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTH
YIPGEGKMPLRELMRDIIERGYEGYCTVELVTMYMNEPRLYARQALERFRALLPEDER
"
misc_feature complement(411039..411863)
/locus_tag="ECBD_0376"
/note="fructoselysine 3-epimerase; Provisional; Region:
PRK09856"
/db_xref="CDD:182116"
misc_feature complement(411054..411821)
/locus_tag="ECBD_0376"
/note="AP endonuclease family 2; These endonucleases play
a role in DNA repair. Cleave phosphodiester bonds at
apurinic or apyrimidinic sites; the alignment also
contains hexulose-6-phosphate isomerases, enzymes that
catalyze the epimerization of...; Region: AP2Ec; cl12060"
/db_xref="CDD:245856"
misc_feature complement(order(411084..411086,411117..411119,
411645..411647,411765..411767))
/locus_tag="ECBD_0376"
/note="AP (apurinic/apyrimidinic) site pocket; other site"
/db_xref="CDD:237986"
misc_feature complement(order(411627..411629,411636..411638,
411642..411647,411747..411749,411750..411758))
/locus_tag="ECBD_0376"
/note="DNA interaction; other site"
/db_xref="CDD:237986"
misc_feature complement(order(411117..411119,411210..411212,
411216..411218,411243..411245,411321..411323,
411420..411422,411525..411527,411666..411668))
/locus_tag="ECBD_0376"
/note="Metal-binding active site; metal-binding site"
/db_xref="CDD:237986"
gene complement(411913..412935)
/gene="frlB"
/locus_tag="ECBD_0377"
/db_xref="GeneID:8155983"
CDS complement(411913..412935)
/gene="frlB"
/locus_tag="ECBD_0377"
/inference="protein motif:PFAM:PF01380"
/note="catalyzes the conversion of fructoselysine
6-phosphate to glucose 6-phosphate and lysine"
/codon_start=1
/transl_table=11
/product="fructoselysine-6-P-deglycase"
/protein_id="YP_003034633.1"
/db_xref="GI:253771802"
/db_xref="InterPro:IPR001347"
/db_xref="GeneID:8155983"
/translation="MLDIDKSTVDFLVTENMVQEVEKVLSHDVPLVHAIVEEMVKRDI
DRIYFVACGSPLNAAQTAKHLADRFSDLQVYAISGWEFCDNTPYRLDDRCAVIGVSDY
GKTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSIDYQADCIWEIHLLLCYSVV
LEMITRLAPNAEIGKIKNDLKQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGP
LRPLGYKEGIVTLMEFTWTHGCVIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTER
AINFVKQRTDNVIVIDYAEISQGLHPWLAPFLMFVPMEWLCYYLSIYKDHNPDERRYY
GGLVEY"
misc_feature complement(411916..412935)
/gene="frlB"
/locus_tag="ECBD_0377"
/note="fructoselysine-6-P-deglycase; Provisional; Region:
frlB; PRK11382"
/db_xref="CDD:183111"
misc_feature complement(412450..412800)
/gene="frlB"
/locus_tag="ECBD_0377"
/note="SIS domain. SIS (Sugar ISomerase) domains are found
in many phosphosugar isomerases and phosphosugar binding
proteins. SIS domains are also found in proteins that
regulate the expression of genes involved in synthesis of
phosphosugars; Region: SIS; cl00389"
/db_xref="CDD:241833"
misc_feature complement(411934..412350)
/gene="frlB"
/locus_tag="ECBD_0377"
/note="SIS (Sugar ISomerase) domain repeat 2 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_2; cd05009"
/db_xref="CDD:240142"
misc_feature complement(order(411937..411942,412096..412101,
412105..412107,412117..412122,412171..412182,
412186..412194,412198..412200,412210..412212,
412216..412218,412222..412224,412228..412230,
412240..412242,412285..412287))
/gene="frlB"
/locus_tag="ECBD_0377"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:240142"
misc_feature complement(order(412237..412239,412246..412248))
/gene="frlB"
/locus_tag="ECBD_0377"
/note="active site"
/db_xref="CDD:240142"
gene complement(412956..414293)
/gene="frlA"
/locus_tag="ECBD_0378"
/db_xref="GeneID:8155984"
CDS complement(412956..414293)
/gene="frlA"
/locus_tag="ECBD_0378"
/inference="protein motif:PFAM:PF00324"
/note="inner membrane protein possibly involved in
fructoselysine transport; member of the flr operon"
/codon_start=1
/transl_table=11
/product="fructoselysine transporter"
/protein_id="YP_003034634.1"
/db_xref="GI:253771803"
/db_xref="InterPro:IPR004841"
/db_xref="GeneID:8155984"
/translation="MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWL
TVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDA
PSLSIMALAIVSNLGFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAK
IIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMT
GEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPAL
GSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSI
ILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKPLWRTPAFGL
MTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQLNALS"
misc_feature complement(412959..414293)
/gene="frlA"
/locus_tag="ECBD_0378"
/note="putative fructoselysine transporter; Provisional;
Region: frlA; PRK11357"
/db_xref="CDD:183096"
misc_feature complement(<413613..414158)
/gene="frlA"
/locus_tag="ECBD_0378"
/note="hypothetical protein; Provisional; Region:
PHA02764"
/db_xref="CDD:165129"
gene complement(414588..414755)
/locus_tag="ECBD_0379"
/db_xref="GeneID:8155985"
CDS complement(414588..414755)
/locus_tag="ECBD_0379"
/inference="similar to AA sequence:KEGG:SbBS512_E3747"
/note="KEGG: sbc:SbBS512_E3747 lipoprotein"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_003034635.1"
/db_xref="GI:253771804"
/db_xref="GeneID:8155985"
/translation="MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISIS
KIIGGCGPTAQ"
misc_feature complement(414591..414755)
/locus_tag="ECBD_0379"
/note="Protein of unknown function (DUF4223); Region:
DUF4223; pfam13978"
/db_xref="CDD:206148"
sig_peptide complement(414687..414755)
/locus_tag="ECBD_0379"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.983) with cleavage site probability 0.595 at
residue 23"
gene complement(415002..416375)
/gene="cysG"
/locus_tag="ECBD_0380"
/db_xref="GeneID:8155986"
CDS complement(415002..416375)
/gene="cysG"
/locus_tag="ECBD_0380"
/inference="protein motif:TFAM:TIGR01469"
/note="multifunction enzyme consisting of uroporphyrin-III
C-methyltransferase, precorrin-2 dehydrogenase and
sirohydrochlorin ferrochelatase; catalyzes the methylation
of uroporphyrinogen III to form precorrin-2, then
catalyzes formation of sirohydrochlorin from precorrin-2
and finally catalyzed the formation of siroheme from
sirohydrochlorin"
/codon_start=1
/transl_table=11
/product="siroheme synthase"
/protein_id="YP_003034636.1"
/db_xref="GI:253771805"
/db_xref="InterPro:IPR000878"
/db_xref="InterPro:IPR003043"
/db_xref="InterPro:IPR006366"
/db_xref="InterPro:IPR006367"
/db_xref="GeneID:8155986"
/translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALA
FIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDALNQRVSEAAEARRIFCNV
VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQ
LRGRVKQQFATMGERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEV
VLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC
VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAAS
GCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQ
KLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDK
LNWFSNH"
misc_feature complement(415005..416375)
/gene="cysG"
/locus_tag="ECBD_0380"
/note="siroheme synthase; Provisional; Region: cysG;
PRK10637"
/db_xref="CDD:182606"
misc_feature complement(416031..416360)
/gene="cysG"
/locus_tag="ECBD_0380"
/note="Putative NAD(P)-binding; Region: NAD_binding_7;
pfam13241"
/db_xref="CDD:222002"
misc_feature complement(415749..415922)
/gene="cysG"
/locus_tag="ECBD_0380"
/note="Sirohaem synthase dimerisation region; Region:
CysG_dimeriser; pfam10414"
/db_xref="CDD:204480"
misc_feature complement(415038..415727)
/gene="cysG"
/locus_tag="ECBD_0380"
/note="Uroporphyrin-III C-methyltransferase
(S-Adenosyl-L-methionine:uroporphyrinogen III
methyltransferase, SUMT); Region: SUMT; cd11642"
/db_xref="CDD:212501"
misc_feature complement(order(415062..415073,415137..415139,
415143..415148,415152..415154,415224..415238,
415299..415301,415305..415307,415368..415370,
415380..415385,415449..415460,415467..415475,
415626..415634,415701..415703))
/gene="cysG"
/locus_tag="ECBD_0380"
/note="active site"
/db_xref="CDD:212501"
misc_feature complement(order(415062..415070,415143..415148,
415152..415154,415233..415235,415380..415385,
415455..415460,415467..415475,415701..415703))
/gene="cysG"
/locus_tag="ECBD_0380"
/note="SAM binding site [chemical binding]; other site"
/db_xref="CDD:212501"
misc_feature complement(order(415311..415325,415335..415343,
415347..415349,415371..415376,415386..415388,
415392..415394,415398..415400,415419..415424,
415434..415436,415440..415445,415455..415463,
415467..415469,415668..415670,415674..415691))
/gene="cysG"
/locus_tag="ECBD_0380"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:212501"
gene complement(416394..417200)
/locus_tag="ECBD_0381"
/db_xref="GeneID:8155987"
CDS complement(416394..417200)
/locus_tag="ECBD_0381"
/inference="protein motif:TFAM:TIGR00790"
/note="member of the FNT family of formate and nitrite
transporters"
/codon_start=1
/transl_table=11
/product="nitrite transporter NirC"
/protein_id="YP_003034637.1"
/db_xref="GI:253771806"
/db_xref="InterPro:IPR000292"
/db_xref="GeneID:8155987"
/translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL
IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMW
AILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC
NWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYT
LAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG"
misc_feature complement(416397..417200)
/locus_tag="ECBD_0381"
/note="nitrite transporter NirC; Provisional; Region:
PRK11562"
/db_xref="CDD:183200"
gene complement(417326..417652)
/gene="nirD"
/locus_tag="ECBD_0382"
/db_xref="GeneID:8155988"
CDS complement(417326..417652)
/gene="nirD"
/locus_tag="ECBD_0382"
/EC_number="1.7.1.4"
/inference="protein motif:TFAM:TIGR02378"
/note="involved in reducing nitrite to ammonium to
detoxify nitrite accumulation in anaerobic
nitrate-respiring cells and regenerate NAD+; bounds to
NirB, the cytoplasmic subunit, whose expression is induced
at high nitrate concentrations"
/codon_start=1
/transl_table=11
/product="nitrite reductase small subunit"
/protein_id="YP_003034638.1"
/db_xref="GI:253771807"
/db_xref="InterPro:IPR012748"
/db_xref="GeneID:8155988"
/translation="MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN
IDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDG
VVQLRG"
misc_feature complement(417335..417643)
/gene="nirD"
/locus_tag="ECBD_0382"
/note="Assimilatory nitrite reductase (NirD) family,
Rieske domain; Assimilatory nitrate and nitrite reductases
convert nitrate through nitrite to ammonium. Members
include bacterial and fungal proteins. The bacterial NirD
contains a single Rieske domain while...; Region:
Rieske_NirD; cd03529"
/db_xref="CDD:239605"
gene complement(417649..420192)
/locus_tag="ECBD_0383"
/db_xref="GeneID:8155989"
CDS complement(417649..420192)
/locus_tag="ECBD_0383"
/inference="protein motif:TFAM:TIGR02374"
/note="TIGRFAM: nitrite reductase [NAD(P)H], large
subunit;
PFAM: nitrite and sulphite reductase 4Fe-4S region;
FAD-dependent pyridine nucleotide-disulphide
oxidoreductase; BFD domain protein [2Fe-2S]-binding domain
protein; nitrite/sulfite reductase hemoprotein
beta-component ferrodoxin domain protein;
KEGG: sbc:SbBS512_E3741 nitrite reductase [NAD(P)H], large
subunit"
/codon_start=1
/transl_table=11
/product="nitrite reductase (NAD(P)H), large subunit"
/protein_id="YP_003034639.1"
/db_xref="GI:253771808"
/db_xref="InterPro:IPR000103"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR005117"
/db_xref="InterPro:IPR006066"
/db_xref="InterPro:IPR006067"
/db_xref="InterPro:IPR007419"
/db_xref="InterPro:IPR012744"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:8155989"
/translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAY
DRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFY
DKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGV
EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDI
YAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIG
DAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIE
LPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK
AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF
EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYS
VIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAG
FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCT
RECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFY
IRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVLCEWTETV
NTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA"
misc_feature complement(417652..420192)
/locus_tag="ECBD_0383"
/note="nitrite reductase subunit NirD; Provisional;
Region: PRK14989"
/db_xref="CDD:184951"
misc_feature complement(419506..>419700)
/locus_tag="ECBD_0383"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:215691"
misc_feature complement(418771..418929)
/locus_tag="ECBD_0383"
/note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD;
pfam04324"
/db_xref="CDD:218027"
misc_feature complement(418585..418737)
/locus_tag="ECBD_0383"
/note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD;
pfam04324"
/db_xref="CDD:218027"
misc_feature complement(418324..418515)
/locus_tag="ECBD_0383"
/note="Nitrite/Sulfite reductase ferredoxin-like half
domain; Region: NIR_SIR_ferr; pfam03460"
/db_xref="CDD:217572"
gene complement(420454..421635)
/locus_tag="ECBD_0384"
/db_xref="GeneID:8155990"
CDS complement(420454..421635)
/locus_tag="ECBD_0384"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: sbo:SBO_3346 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034640.1"
/db_xref="GI:253771809"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8155990"
/translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSS
MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSTA
MFILGVVSGITMSIGTFLITQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSI
EWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCY
ILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQLILTV
LAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVL
TCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTS
H"
sig_peptide complement(421537..421635)
/locus_tag="ECBD_0384"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.995) with cleavage site probability 0.983 at
residue 33"
misc_feature complement(420457..421632)
/locus_tag="ECBD_0384"
/note="putative transporter; Provisional; Region:
PRK03699"
/db_xref="CDD:235151"
misc_feature complement(420502..421608)
/locus_tag="ECBD_0384"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(420613..420615,420622..420627,
420634..420639,420646..420651,420679..420681,
420688..420693,420703..420705,420712..420717,
420724..420726,420862..420864,420874..420876,
420883..420885,420895..420897,420907..420909,
420946..420948,420955..420960,420967..420972,
420979..420981,421201..421203,421219..421224,
421231..421236,421270..421272,421279..421284,
421291..421296,421303..421308,421444..421449,
421453..421458,421468..421470,421477..421482,
421489..421491,421540..421545,421549..421557,
421564..421566))
/locus_tag="ECBD_0384"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 421906..422478
/locus_tag="ECBD_0385"
/db_xref="GeneID:8155991"
CDS 421906..422478
/locus_tag="ECBD_0385"
/inference="protein motif:PFAM:PF00160"
/note="PFAM: peptidyl-prolyl cis-trans isomerase
cyclophilin type;
KEGG: sbc:SbBS512_E3738 peptidyl-prolyl cis-trans
isomerase A"
/codon_start=1
/transl_table=11
/product="peptidyl-prolyl cis-trans isomerase A (rotamase
A)"
/protein_id="YP_003034641.1"
/db_xref="GI:253771810"
/db_xref="InterPro:IPR002130"
/db_xref="GeneID:8155991"
/translation="MFKSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELEL
DKQKAPVSVQNFVNYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEAD
NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD
KISQVPTHDVGPYQNVPSKPVVILSAKVLP"
sig_peptide 421906..421980
/locus_tag="ECBD_0385"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.999 at
residue 25"
misc_feature 421981..422475
/locus_tag="ECBD_0385"
/note="peptidyl-prolyl cis-trans isomerase A (rotamase A);
Provisional; Region: PRK10903"
/db_xref="CDD:182824"
misc_feature 421999..422463
/locus_tag="ECBD_0385"
/note="cyclophilin_EcCYP_like: cyclophilin-type A-like
peptidylprolyl cis- trans isomerase (PPIase) domain
similar to the cytosolic E. coli cyclophilin A and
Streptomyces antibioticus SanCyp18. Compared to the
archetypal cyclophilin Human cyclophilin A, these...;
Region: cyclophilin_EcCYP_like; cd01920"
/db_xref="CDD:238901"
misc_feature order(422119..422121,422125..422127,422134..422139,
422143..422145,422248..422265,422287..422289,
422311..422316,422341..422343)
/locus_tag="ECBD_0385"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238901"
gene 422583..422750
/locus_tag="ECBD_0386"
/db_xref="GeneID:8155992"
CDS 422583..422750
/locus_tag="ECBD_0386"
/inference="similar to AA sequence:KEGG:SFV_3368"
/note="KEGG: sfv:SFV_3368 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034642.1"
/db_xref="GI:253771811"
/db_xref="GeneID:8155992"
/translation="MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALA
RLEELRRHYGR"
misc_feature 422583..422747
/locus_tag="ECBD_0386"
/note="hypothetical protein; Provisional; Region:
PRK10204"
/db_xref="CDD:182304"
gene 422740..423342
/locus_tag="ECBD_0387"
/db_xref="GeneID:8155993"
CDS 422740..423342
/locus_tag="ECBD_0387"
/inference="protein motif:PFAM:PF02661"
/note="PFAM: filamentation induced by cAMP protein Fic;
KEGG: sfv:SFV_3367 cell filamentation protein Fic"
/codon_start=1
/transl_table=11
/product="cell filamentation protein Fic"
/protein_id="YP_003034643.1"
/db_xref="GI:253771812"
/db_xref="InterPro:IPR003812"
/db_xref="GeneID:8155993"
/translation="MGDKFGEGRDPYLYPGLDIMRNRLNIHQQQRLEQAAYEMTALRA
ATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNAL
MQDLEEEGYLVGLEKAKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQL
SWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE"
misc_feature 422740..423339
/locus_tag="ECBD_0387"
/note="Protein involved in cell division [Cell division
and chromosome partitioning]; Region: Fic; COG2184"
/db_xref="CDD:225095"
misc_feature 422740..423339
/locus_tag="ECBD_0387"
/note="cell filamentation protein Fic; Provisional;
Region: PRK10347"
/db_xref="CDD:182396"
gene 423374..423937
/locus_tag="ECBD_0388"
/db_xref="GeneID:8155994"
CDS 423374..423937
/locus_tag="ECBD_0388"
/inference="protein motif:TFAM:TIGR00566"
/note="aminodeoxychorismate synthase subunit PabA; with
PabB catalyzes the formation of 4-amino-4-deoxychorismate
from chorismate and glutamine in para-aminobenzoate
synthesis; PabA provides the glutamine amidotransferase
activity"
/codon_start=1
/transl_table=11
/product="para-aminobenzoate synthase component II"
/protein_id="YP_003034644.1"
/db_xref="GI:253771813"
/db_xref="InterPro:IPR000991"
/db_xref="InterPro:IPR001317"
/db_xref="InterPro:IPR001680"
/db_xref="InterPro:IPR006220"
/db_xref="InterPro:IPR006221"
/db_xref="InterPro:IPR011702"
/db_xref="GeneID:8155994"
/translation="MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKP
QKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG
KTSPITHNGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQW
DLEGVQFHPESILSEQGHQLLANFLHR"
misc_feature 423374..423934
/locus_tag="ECBD_0388"
/note="para-aminobenzoate synthase component II;
Provisional; Region: PRK08857"
/db_xref="CDD:181566"
misc_feature 423377..423928
/locus_tag="ECBD_0388"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in Anthranilate synthase; Region:
GATase1_Anthranilate_Synthase; cd01743"
/db_xref="CDD:153214"
misc_feature order(423524..423529,423533..423535,423608..423613,
423620..423622,423752..423763)
/locus_tag="ECBD_0388"
/note="glutamine binding [chemical binding]; other site"
/db_xref="CDD:153214"
misc_feature order(423608..423610,423875..423877,423881..423883)
/locus_tag="ECBD_0388"
/note="catalytic triad [active]"
/db_xref="CDD:153214"
gene 424023..425243
/gene="argD"
/locus_tag="ECBD_0389"
/db_xref="GeneID:8155995"
CDS 424023..425243
/gene="argD"
/locus_tag="ECBD_0389"
/EC_number="2.6.1.17"
/inference="protein motif:TFAM:TIGR03246"
/note="DapATase; bifunctional enzyme that functions in
arginine and lysine biosynthetic pathways; catalyzes the
formation of N-acetyl-L-glutamate 5-semialdehyde from
2-oxoglutarate and N(2)-acetyl-L-ornithine or
N-succinyl-2-L-amino-6-oxoheptanedioate from
2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate"
/codon_start=1
/transl_table=11
/product="bifunctional
N-succinyldiaminopimelate-aminotransferase/acetylornithine
transaminase protein"
/protein_id="YP_003034645.1"
/db_xref="GI:253771814"
/db_xref="InterPro:IPR004636"
/db_xref="InterPro:IPR004839"
/db_xref="InterPro:IPR005814"
/db_xref="InterPro:IPR017652"
/db_xref="GeneID:8155995"
/translation="MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEY
VDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERV
VFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQ
HQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPISAMLTTAEIASAF
HPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSD
IRGMGLLIGAELKPQYKGRARDFLYAGAEAGVMVLNAGPDVMRFAPSLVVEDADIDEG
MQRFAHAVAKVVGA"
misc_feature 424032..425237
/gene="argD"
/locus_tag="ECBD_0389"
/note="bifunctional
N-succinyldiaminopimelate-aminotransferase/acetylornithine
transaminase protein; Reviewed; Region: argD; PRK05093"
/db_xref="CDD:179933"
misc_feature 424083..425222
/gene="argD"
/locus_tag="ECBD_0389"
/note="Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The major
groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase;
Region: OAT_like; cd00610"
/db_xref="CDD:99735"
misc_feature order(424341..424349,424443..424448,424452..424454,
424599..424601,424698..424700,424704..424709,
424785..424787)
/gene="argD"
/locus_tag="ECBD_0389"
/note="inhibitor-cofactor binding pocket; inhibition site"
/db_xref="CDD:99735"
misc_feature order(424344..424349,424443..424448,424599..424601,
424698..424700,424707..424709,424785..424787)
/gene="argD"
/locus_tag="ECBD_0389"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature 424785..424787
/gene="argD"
/locus_tag="ECBD_0389"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene complement(425310..427400)
/locus_tag="ECBD_0390"
/db_xref="GeneID:8155996"
CDS complement(425310..427400)
/locus_tag="ECBD_0390"
/inference="protein motif:TFAM:TIGR01667"
/note="TIGRFAM: integral membrane protein, YccS/YhfK
family;
PFAM: protein of unknown function DUF893 YccS/YhfK;
KEGG: sbc:SbBS512_E3734 integral membrane protein,
YccS/YhfK family"
/codon_start=1
/transl_table=11
/product="integral membrane protein, YccS/YhfK family"
/protein_id="YP_003034646.1"
/db_xref="GI:253771815"
/db_xref="InterPro:IPR010020"
/db_xref="InterPro:IPR010289"
/db_xref="GeneID:8155996"
/translation="MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVP
ACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTA
ELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQP
LRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLS
AQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARL
RVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPL
YARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWI
LMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASY
LILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQW
QSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEP
AFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALTPELAQEYLQSCEIAIQRCQQ
RLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPH
HGIWLSRKLRDSKA"
misc_feature complement(425373..427367)
/locus_tag="ECBD_0390"
/note="integral membrane protein, YccS/YhfK family;
Region: YCCS_YHJK; TIGR01667"
/db_xref="CDD:130728"
misc_feature complement(426411..427217)
/locus_tag="ECBD_0390"
/note="FUSC-like inner membrane protein yccS; Region:
FUSC-like; pfam12805"
/db_xref="CDD:221781"
misc_feature complement(425907..426275)
/locus_tag="ECBD_0390"
/note="Fusaric acid resistance protein-like; Region:
FUSC_2; pfam13515"
/db_xref="CDD:222189"
gene complement(427451..428083)
/locus_tag="ECBD_0391"
/db_xref="GeneID:8155997"
CDS complement(427451..428083)
/locus_tag="ECBD_0391"
/inference="protein motif:PFAM:PF00027"
/note="complexes with cyclic AMP and binds to specific DNA
sites near the promoter to regulate the transcription of
several catabolite-sensitive operons"
/codon_start=1
/transl_table=11
/product="cAMP-regulatory protein"
/protein_id="YP_003034647.1"
/db_xref="GI:253771816"
/db_xref="InterPro:IPR000595"
/db_xref="InterPro:IPR001808"
/db_xref="InterPro:IPR012318"
/db_xref="GeneID:8155997"
/translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
misc_feature complement(427454..428083)
/locus_tag="ECBD_0391"
/note="DNA-binding transcriptional dual regulator Crp;
Provisional; Region: PRK11753"
/db_xref="CDD:236969"
misc_feature complement(427733..428062)
/locus_tag="ECBD_0391"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
cd00038"
/db_xref="CDD:237999"
misc_feature complement(order(427829..427837,427865..427870))
/locus_tag="ECBD_0391"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:237999"
misc_feature complement(order(427745..427753,427763..427771))
/locus_tag="ECBD_0391"
/note="flexible hinge region; other site"
/db_xref="CDD:237999"
misc_feature complement(427463..427666)
/locus_tag="ECBD_0391"
/note="helix_turn_helix, cAMP Regulatory protein
C-terminus; DNA binding domain of prokaryotic regulatory
proteins belonging to the catabolite activator protein
family; Region: HTH_CRP; cd00092"
/db_xref="CDD:238044"
misc_feature complement(427652..427657)
/locus_tag="ECBD_0391"
/note="putative switch regulator; other site"
/db_xref="CDD:238044"
misc_feature complement(order(427544..427546,427571..427579,
427583..427585))
/locus_tag="ECBD_0391"
/note="non-specific DNA interactions [nucleotide binding];
other site"
/db_xref="CDD:238044"
misc_feature complement(427526..427546)
/locus_tag="ECBD_0391"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238044"
misc_feature complement(order(427526..427528,427538..427543))
/locus_tag="ECBD_0391"
/note="sequence specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238044"
misc_feature complement(427538..427543)
/locus_tag="ECBD_0391"
/note="putative cAMP binding site [chemical binding];
other site"
/db_xref="CDD:238044"
gene 428385..428789
/locus_tag="ECBD_0392"
/db_xref="GeneID:8155998"
CDS 428385..428789
/locus_tag="ECBD_0392"
/inference="protein motif:PFAM:PF02566"
/note="PFAM: OsmC family protein;
KEGG: sdy:SDY_3518 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034648.1"
/db_xref="GI:253771817"
/db_xref="InterPro:IPR003718"
/db_xref="GeneID:8155998"
/translation="MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAA
GGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVA
RAVDLSAEKYCSVALMLEKAVNITHSYEVVAA"
misc_feature 428385..428786
/locus_tag="ECBD_0392"
/note="hypothetical protein; Provisional; Region:
PRK10738"
/db_xref="CDD:182688"
gene complement(428844..429713)
/locus_tag="ECBD_0393"
/db_xref="GeneID:8155999"
CDS complement(428844..429713)
/locus_tag="ECBD_0393"
/EC_number="2.7.1.19"
/inference="protein motif:PRIAM:2.7.1.19"
/note="PFAM: phosphoribulokinase/uridine kinase;
KEGG: sfv:SFV_3361 phosphoribulokinase"
/codon_start=1
/transl_table=11
/product="phosphoribulokinase"
/protein_id="YP_003034649.1"
/db_xref="GI:253771818"
/db_xref="InterPro:IPR006082"
/db_xref="InterPro:IPR006083"
/db_xref="GeneID:8155999"
/translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF
HRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYD
EAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLE
WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFA
AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML
PLVQRLMEGKKIE"
sig_peptide complement(429639..429713)
/locus_tag="ECBD_0393"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.637) with cleavage site probability 0.588 at
residue 25"
misc_feature complement(428865..429695)
/locus_tag="ECBD_0393"
/note="Phosphoribulokinase-like (PRK-like) is a family of
proteins similar to phosphoribulokinase (PRK), the enzyme
involved in the Benson-Calvin cycle in chloroplasts or
photosynthetic prokaryotes. PRK catalyzes the
phosphorylation of D-ribulose 5-phosphate to...; Region:
PRK_like; cd02029"
/db_xref="CDD:238987"
misc_feature complement(order(429654..429665,429678..429680))
/locus_tag="ECBD_0393"
/note="active site"
/db_xref="CDD:238987"
gene complement(429767..429985)
/locus_tag="ECBD_0394"
/db_xref="GeneID:8156000"
CDS complement(429767..429985)
/locus_tag="ECBD_0394"
/inference="protein motif:PFAM:PF06794"
/note="PFAM: protein of unknown function UPF0270;
KEGG: sbc:SbBS512_E3729 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034650.1"
/db_xref="GI:253771819"
/db_xref="InterPro:IPR010648"
/db_xref="GeneID:8156000"
/translation="MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKR
QLQCGEAVLVWSELHETVNIMPRSQFRE"
misc_feature complement(429770..429985)
/locus_tag="ECBD_0394"
/note="hypothetical protein; Provisional; Region:
PRK04966"
/db_xref="CDD:179903"
gene complement(429979..431001)
/locus_tag="ECBD_0395"
/db_xref="GeneID:8156001"
CDS complement(429979..431001)
/locus_tag="ECBD_0395"
/inference="protein motif:PFAM:PF00561"
/note="PFAM: alpha/beta hydrolase fold;
KEGG: ssn:SSON_3484 predicted hydrolase"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="YP_003034651.1"
/db_xref="GI:253771820"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000952"
/db_xref="GeneID:8156001"
/translation="MAQITTTDANEFSSSAEFIPMRGFSNCHLQTMLPRLFRRQVKFT
PYWQRLELPDGDFVDLAWSENPAQAQHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGW
LGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
CLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAY
PGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIH
AKDDPFMDHQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTY
LEAKSC"
misc_feature complement(429988..430959)
/locus_tag="ECBD_0395"
/note="putative hydrolase; Provisional; Region: PRK10985"
/db_xref="CDD:182883"
gene complement(431001..432914)
/locus_tag="ECBD_0396"
/db_xref="GeneID:8156002"
CDS complement(431001..432914)
/locus_tag="ECBD_0396"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: ATPase AAA;
KEGG: ssn:SSON_3483 ABC transporter ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_003034652.1"
/db_xref="GI:253771821"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8156002"
/translation="MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLL
ALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDAN
ERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL
AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIH
IEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
QSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLN
LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADE
SPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPN
LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPF
DGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIAR
LEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQ
EQLEQMLLEGQSN"
misc_feature complement(431055..432914)
/locus_tag="ECBD_0396"
/note="putative ABC transporter ATP-binding protein;
Provisional; Region: PRK10636"
/db_xref="CDD:236729"
misc_feature complement(<432372..432911)
/locus_tag="ECBD_0396"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature complement(432792..432815)
/locus_tag="ECBD_0396"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(order(432390..432395,432789..432797,
432801..432806))
/locus_tag="ECBD_0396"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature complement(432249..>432467)
/locus_tag="ECBD_0396"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
misc_feature complement(432438..432467)
/locus_tag="ECBD_0396"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature complement(432390..432407)
/locus_tag="ECBD_0396"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature complement(432372..432383)
/locus_tag="ECBD_0396"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(432015..432266)
/locus_tag="ECBD_0396"
/note="ABC transporter; Region: ABC_tran_2; pfam12848"
/db_xref="CDD:221805"
misc_feature complement(431403..431978)
/locus_tag="ECBD_0396"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
gene 433045..433596
/locus_tag="ECBD_0397"
/db_xref="GeneID:8156003"
CDS 433045..433596
/locus_tag="ECBD_0397"
/inference="protein motif:PFAM:PF02525"
/note="required for KefB activity"
/codon_start=1
/transl_table=11
/product="glutathione-regulated potassium-efflux system
ancillary protein KefG"
/protein_id="YP_003034653.1"
/db_xref="GI:253771822"
/db_xref="InterPro:IPR003680"
/db_xref="GeneID:8156003"
/translation="MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHY
PDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAG
KYWRSVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSA
QELASHARAYGDWLANPLSPGGR"
misc_feature 433045..433593
/locus_tag="ECBD_0397"
/note="glutathione-regulated potassium-efflux system
ancillary protein KefG; Provisional; Region: PRK04930"
/db_xref="CDD:179895"
gene 433596..435401
/locus_tag="ECBD_0398"
/db_xref="GeneID:8156004"
CDS 433596..435401
/locus_tag="ECBD_0398"
/inference="protein motif:TFAM:TIGR00932"
/note="involved in potassium efflux"
/codon_start=1
/transl_table=11
/product="glutathione-regulated potassium-efflux system
protein KefB"
/protein_id="YP_003034654.1"
/db_xref="GI:253771823"
/db_xref="InterPro:IPR003148"
/db_xref="InterPro:IPR004771"
/db_xref="InterPro:IPR006036"
/db_xref="InterPro:IPR006153"
/db_xref="GeneID:8156004"
/translation="MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGP
WGLGFISDVDEILHFSELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALL
AGLLMLTDFAWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAV
IPALALVPLLAGSADEHFDWMKIGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFT
AATLLLVLGSALFMDALGLSMALGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFI
SVGMSLNLGVLYTHLLWVVISVVVLVAVKILVLYLLARLYGVRSSERMQFAGVLSQGG
EFAFVLFSTASSQRLFQGDQMALLLVTVTLSMMTTPLLMKLVDKWLSRQFNGPEEEDE
KPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGD
ATQVDLLRSAGAEAAESIVITCNEPEDTMKLVEICQQHFPHLHILARARGRVEAHELL
QAGVTQFSRETFSSALELGRKTLVTLGMHPHQAQRAQLHFRRLDMRMLRELIPMHADT
VQISRAREARRELEEIFQREMQQERRQLDGWDEFE"
misc_feature 433596..435395
/locus_tag="ECBD_0398"
/note="glutathione-regulated potassium-efflux system
protein KefB; Provisional; Region: PRK03659"
/db_xref="CDD:179625"
sig_peptide 433596..433655
/locus_tag="ECBD_0398"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.947) with cleavage site probability 0.511 at
residue 20"
misc_feature 433668..434444
/locus_tag="ECBD_0398"
/note="transporter, monovalent cation:proton antiporter-2
(CPA2) family; Region: 2a37; TIGR00932"
/db_xref="CDD:233195"
misc_feature 434802..435137
/locus_tag="ECBD_0398"
/note="TrkA-N domain; Region: TrkA_N; pfam02254"
/db_xref="CDD:216949"
gene 435411..435611
/locus_tag="ECBD_0399"
/db_xref="GeneID:8156005"
CDS 435411..435611
/locus_tag="ECBD_0399"
/inference="similar to AA sequence:KEGG:SDY_3511"
/note="KEGG: sdy:SDY_3511 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034655.1"
/db_xref="GI:253771824"
/db_xref="InterPro:IPR012658"
/db_xref="GeneID:8156005"
/translation="MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMRE
ADKEARDHVRKDEQVIGIFHPD"
misc_feature 435411..435608
/locus_tag="ECBD_0399"
/note="Predicted nucleic-acid-binding protein containing a
Zn-ribbon domain [General function prediction only];
Region: COG3529"
/db_xref="CDD:226060"
gene 435706..436296
/locus_tag="ECBD_0400"
/db_xref="GeneID:8156006"
CDS 435706..436296
/locus_tag="ECBD_0400"
/inference="protein motif:PFAM:PF00254"
/note="rotamase"
/codon_start=1
/transl_table=11
/product="FKBP-type peptidyl-prolyl cis-trans isomerase"
/protein_id="YP_003034656.1"
/db_xref="GI:253771825"
/db_xref="InterPro:IPR001179"
/db_xref="GeneID:8156006"
/translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
GPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
DHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH"
misc_feature 435706..436149
/locus_tag="ECBD_0400"
/note="FKBP-type peptidyl-prolyl cis-trans isomerase;
Provisional; Region: PRK15095"
/db_xref="CDD:237908"
misc_feature 435709..435927
/locus_tag="ECBD_0400"
/note="FKBP-type peptidyl-prolyl cis-trans isomerase;
Region: FKBP_C; pfam00254"
/db_xref="CDD:215821"
gene complement(436345..436563)
/locus_tag="ECBD_0401"
/db_xref="GeneID:8156007"
CDS complement(436345..436563)
/locus_tag="ECBD_0401"
/inference="protein motif:PFAM:PF04102"
/note="PFAM: SlyX family protein;
KEGG: sfv:SFV_3353 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003034657.1"
/db_xref="GI:253771826"
/db_xref="InterPro:IPR007236"
/db_xref="GeneID:8156007"
/translation="MQDLSLEARLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDH
LRLLTEKLKASQPSNIASQAEETPPPHY"
misc_feature complement(436348..>436509)
/locus_tag="ECBD_0401"
/note="phi X174 lysis protein; Provisional; Region:
PRK02793"
/db_xref="CDD:179472"
gene 436784..437596
/locus_tag="ECBD_0402"
/db_xref="GeneID:8156008"
CDS 436784..437596
/locus_tag="ECBD_0402"
/inference="protein motif:PFAM:PF01346"
/note="rotamase"
/codon_start=1
/transl_table=11
/product="FKBP-type peptidyl-prolyl cis-trans isomerase"
/protein_id="YP_003034658.1"
/db_xref="GI:253771827"
/db_xref="InterPro:IPR000774"
/db_xref="InterPro:IPR001179"
/db_xref="GeneID:8156008"
/translation="MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKND
DQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTL
QAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEA
PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLV
IPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK"
misc_feature 436784..437527
/locus_tag="ECBD_0402"
/note="FKBP-type peptidyl-prolyl cis-trans isomerase;
Provisional; Region: PRK10902"
/db_xref="CDD:236791"
sig_peptide 436784..436861
/locus_tag="ECBD_0402"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.978 at
residue 26"
misc_feature 436892..437239
/locus_tag="ECBD_0402"
/note="Domain amino terminal to FKBP-type peptidyl-prolyl
isomerase; Region: FKBP_N; pfam01346"
/db_xref="CDD:216447"
misc_feature 437258..437521
/locus_tag="ECBD_0402"
/note="FKBP-type peptidyl-prolyl cis-trans isomerase;
Region: FKBP_C; pfam00254"
/db_xref="CDD:215821"
gene 437763..438485
/locus_tag="ECBD_0403"
/db_xref="GeneID:8156009"
CDS 437763..438485
/locus_tag="ECBD_0403"
/inference="protein motif:PFAM:PF08348"
/note="PFAM: YheO domain protein;
KEGG: sfx:S4398 hypothetical protein"
/codon_start=1
/transl_table=11
/product="YheO domain protein"
/protein_id="YP_003034659.1"
/db_xref="GI:253771828"
/db_xref="InterPro:IPR013559"
/db_xref="GeneID:8156009"
/translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG
SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI
SKHTVYLYIRQFKSGDFQGQDK"
misc_feature 437817..438467
/locus_tag="ECBD_0403"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG2964"
/db_xref="CDD:225512"
misc_feature 437844..438176
/locus_tag="ECBD_0403"
/note="YheO-like PAS domain; Region: PAS_6; pfam08348"
/db_xref="CDD:116929"
misc_feature 438255..438446
/locus_tag="ECBD_0403"
/note="HTH domain; Region: HTH_22; pfam13309"
/db_xref="CDD:205489"
gene 438485..438871
/locus_tag="ECBD_0404"
/db_xref="GeneID:8156010"
CDS 438485..438871
/locus_tag="ECBD_0404"
/inference="protein motif:TFAM:TIGR03012"
/note="in Escherichai coli the heterohexameric TusBCD
complex is involved in sulfur related that results in
thiouridation to U34 position in some tRNAs"
/codon_start=1
/transl_table=11
/product="sulfur transfer complex subunit TusD"
/protein_id="YP_003034660.1"
/db_xref="GI:253771829"
/db_xref="InterPro:IPR003787"
/db_xref="InterPro:IPR017463"
/db_xref="GeneID:8156010"
/translation="MRFAIVVTGPAYGTQQASSAFQFAQALIVEGHELSSVFFYREGV
YNANQLTSPASDEFDLVRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSN
LQPGFTLSGLGALAEASLTCDRVVQF"
misc_feature 438485..438868
/locus_tag="ECBD_0404"
/note="sulfur transfer complex subunit TusD; Validated;
Region: PRK00207"
/db_xref="CDD:178928"
gene 438871..439230
/locus_tag="ECBD_0405"
/db_xref="GeneID:8156011"
CDS 438871..439230
/locus_tag="ECBD_0405"
/inference="protein motif:TFAM:TIGR03010"
/note="in Escherichai coli the heterohexameric TusBCD
complex is involved in sulfur related that results in
thiouridation to U34 position in some tRNAs"
/codon_start=1
/transl_table=11
/product="sulfur relay protein TusC"
/protein_id="YP_003034661.1"
/db_xref="GI:253771830"
/db_xref="InterPro:IPR003787"
/db_xref="InterPro:IPR017462"
/db_xref="GeneID:8156011"
/translation="MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV
FQLLSGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLE
ADALRRELANYDVILRF"
misc_feature 438871..439227
/locus_tag="ECBD_0405"
/note="sulfur relay protein TusC; Validated; Region:
PRK00211"
/db_xref="CDD:178930"
gene 439238..439525
/locus_tag="ECBD_0406"
/db_xref="GeneID:8156012"
CDS 439238..439525
/locus_tag="ECBD_0406"
/inference="protein motif:TFAM:TIGR03011"
/note="in Escherichai coli the heterohexameric TusBCD
complex is involved in sulfur related that results in
thiouridation to U34 position in some tRNAs"
/codon_start=1
/transl_table=11
/product="sulfur transfer complex subunit TusB"
/protein_id="YP_003034662.1"
/db_xref="GI:253771831"
/db_xref="InterPro:IPR007215"
/db_xref="GeneID:8156012"
/translation="MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYL
ESLRNAPIKVYALNEDLIARGLTGQISNDIIPIDYTDFVRLTVKHSSQMAW"
misc_feature 439238..439522
/locus_tag="ECBD_0406"
/note="sulfur transfer complex subunit TusB; Provisional;
Region: PRK13510"
/db_xref="CDD:184101"
gene 439651..440025
/gene="rpsL"
/locus_tag="ECBD_0407"
/db_xref="GeneID:8156013"
CDS 439651..440025
/gene="rpsL"
/locus_tag="ECBD_0407"
/inference="protein motif:TFAM:TIGR00981"
/note="interacts with and stabilizes bases of the 16S rRNA
that are involved in tRNA selection in the A site and with
the mRNA backbone; located at the interface of the 30S and
50S subunits, it traverses the body of the 30S subunit
contacting proteins on the other side; mutations in the
S12 gene confer streptomycin resistance"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S12"
/protein_id="YP_003034663.1"
/db_xref="GI:253771832"
/db_xref="InterPro:IPR005679"
/db_xref="InterPro:IPR006032"
/db_xref="GeneID:8156013"
/translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
DCSGVKDRKQARSKYGVKRPKA"
misc_feature 439657..439980
/gene="rpsL"
/locus_tag="ECBD_0407"
/note="S12-like family, 30S ribosomal protein S12
subfamily; S12 is located at the interface of the large
and small ribosomal subunits of prokaryotes, chloroplasts
and mitochondria, where it plays an important role in both
tRNA and ribosomal subunit...; Region: Ribosomal_S12;
cd03368"
/db_xref="CDD:239466"
misc_feature order(439660..439665,439669..439674,439681..439686)
/gene="rpsL"
/locus_tag="ECBD_0407"
/note="S17 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:239466"
misc_feature 439660..439662
/gene="rpsL"
/locus_tag="ECBD_0407"
/note="S8 interaction site; other site"
/db_xref="CDD:239466"
misc_feature order(439684..439692,439726..439728,439732..439737,
439741..439743,439786..439791,439795..439803,
439822..439824,439846..439848,439855..439860,
439897..439902,439912..439917,439978..439980)
