LOCUS NC_013222 3530383 bp DNA circular BCT 13-FEB-2012
DEFINITION Robiginitalea biformata HTCC2501 chromosome, complete genome.
ACCESSION NC_013222
VERSION NC_013222.1 GI:260060589
DBLINK Project: 58285
BioProject: PRJNA58285
KEYWORDS .
SOURCE Robiginitalea biformata HTCC2501
ORGANISM Robiginitalea biformata HTCC2501
Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales;
Flavobacteriaceae; Robiginitalea.
REFERENCE 1 (bases 1 to 3530383)
AUTHORS Oh,H.M., Giovannoni,S.J., Lee,K., Ferriera,S., Johnson,J. and
Cho,J.C.
TITLE Complete genome sequence of Robiginitalea biformata HTCC2501
JOURNAL J. Bacteriol. 191 (22), 7144-7145 (2009)
PUBMED 19767438
REFERENCE 2 (bases 1 to 3530383)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (28-SEP-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3530383)
AUTHORS Oh,H.-M., Lee,K. and Cho,J.-C.
TITLE Direct Submission
JOURNAL Submitted (19-AUG-2009) Division of Biology and Ocean Sciences,
Inha University, College of Natural Sciences Inha University,
Incheon 402-751, Republic of Korea
REFERENCE 4 (bases 1 to 3530383)
AUTHORS Giovannoni,S.J., Cho,J.-C., Ferriera,S., Johnson,J., Kravitz,S.,
Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H.,
Friedman,R. and Venter,J.C.
TITLE Direct Submission
JOURNAL Submitted (22-FEB-2006) J Craig Venter Institute, 9704 Medical
Center Drive, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to CP001712.
Robiginitalea biformata HTCC2501 is available from ATCC or KCTC
under the names of ATCC BAA-864 or KCTC 12146 respectively.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..3530383
/organism="Robiginitalea biformata HTCC2501"
/mol_type="genomic DNA"
/strain="HTCC2501"
/db_xref="taxon:313596"
gene join(3530041..3530383,1..54)
/locus_tag="RB2501_03305"
/db_xref="GeneID:8457609"
CDS join(3530041..3530382,1..54)
/locus_tag="RB2501_03305"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193670.1"
/db_xref="GI:260060590"
/db_xref="GeneID:8457609"
/translation="MKFILRLLLSALAVVILSKILPGVSVASYGIAILVAVVLSLLNF
IVKPLLIILTLPVTILTLGLFLLIINALIILMADGLITGFAVDGIWWALLFSLLLSIL
QSLLFSFLKEEKNKHQQLKYSRLKTCRVG"
misc_feature 3530095..3530316
/locus_tag="RB2501_03305"
/note="Membrane protein of unknown function; Region:
DUF360; pfam04020"
/db_xref="CDD:202855"
gene 101..1423
/locus_tag="RB2501_03310"
/db_xref="GeneID:8454351"
CDS 101..1423
/locus_tag="RB2501_03310"
/codon_start=1
/transl_table=11
/product="trigger factor"
/protein_id="YP_003193671.1"
/db_xref="GI:260060591"
/db_xref="GeneID:8454351"
/translation="MNITKEQIDELNAVLKVAITKEDYQDKVDKILKDYRKNANIPGF
RKGQVPMGLIKKQYGKAVLVDEVNKLLQDNLNNYLVEEKLDVLGNPLPKQQDNFNWDS
EELAFEFELGLAPEFEVSLKTKKAIPHYKIVADKKMIDDQVTRIRKQYGKLVAKKEIT
AGDEVTGTFVNEAAEIEHKTTLDLSKVKSKKALSALKGSKPGDTVTLKTKGLLTEDYL
LASTLGIDREQAEDLNIEVEFNIEEVNERQPAELNQELFDKLFGPGNVTSEKEMRERI
KEDSEGQFQQQSDQKLLNDVTEQLIESTQFDLPREFLKKWMQTTGEKPLSPEEASDEF
ERSEKGLRYQLIEGKLIKEHGLDIQFDELKEFAKGFIRSQMAQYGQTDPKEEDLENIA
GRVMGNREEVKRLSEQLMSQKLLSLYKEKANLKVKEVNYDQFVKEVYG"
misc_feature 137..1255
/locus_tag="RB2501_03310"
/note="trigger factor; Region: tig; TIGR00115"
/db_xref="CDD:199992"
gene 1691..2278
/locus_tag="RB2501_03315"
/db_xref="GeneID:8454352"
CDS 1691..2278
/locus_tag="RB2501_03315"
/codon_start=1
/transl_table=11
/product="ATP-dependent Clp protease, proteolytic subunit"
/protein_id="YP_003193672.1"
/db_xref="GI:260060592"
/db_xref="GeneID:8454352"
/translation="MGMTPNIIEERQLNAIAMDVFSRLMMDRIIFLGTGISDQVANIV
QAQLLFLASADSSKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMAAV
LLCAGEKGKRSGLQHSRVMIHQPLSGAQGQASDIEIAAREVLKIKDELYQIISKHSGQ
PFDRIQEDSDRDYWMKAGEALEYGMIDEILERDKD"
misc_feature 1733..2269
/locus_tag="RB2501_03315"
/note="Clp protease; Region: CLP_protease; pfam00574"
/db_xref="CDD:201316"
misc_feature 1745..2257
/locus_tag="RB2501_03315"
/note="Caseinolytic protease (ClpP) is an ATP-dependent,
highly conserved serine protease; Region: S14_ClpP_2;
cd07017"
/db_xref="CDD:132928"
misc_feature order(1781..1783,1787..1789,1814..1819,1826..1831,
1838..1840,1883..1885,1904..1906,1916..1918,1925..1927,
1934..1939,1949..1951,1973..1975,2039..2041,2045..2047,
2063..2074,2114..2116,2123..2125,2129..2131,2135..2137,
2204..2206,2210..2212)
/locus_tag="RB2501_03315"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:132928"
misc_feature order(1982..1984,2057..2059,2204..2206)
/locus_tag="RB2501_03315"
/note="active site residues [active]"
/db_xref="CDD:132928"
gene 2360..3595
/gene="clpX"
/locus_tag="RB2501_03320"
/db_xref="GeneID:8454353"
CDS 2360..3595
/gene="clpX"
/locus_tag="RB2501_03320"
/note="binds and unfolds substrates as part of the ClpXP
protease"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease ATP-binding subunit ClpX"
/protein_id="YP_003193673.1"
/db_xref="GI:260060593"
/db_xref="GeneID:8454353"
/translation="MAKENLECSFCGRKKPETNLLIAGLDAHICDRCIEQAHGIVAEE
SRQSKSDDLSSELVLKKPVEIKEFLDTYVIGQERTKKVLSVAVYNHYKRLLQPSSKED
EIEIQKSNIVMVGQTGTGKTLMAKTIARMLNVPLAIVDATVLTEAGYVGEDVESILTR
LLQAADYNLEKAERGIVFIDELDKIARKSDNPSITRDVSGEGVQQGLLKLLEGTVVNV
PPKGGRKHPDQKFIEVNTENILFIAGGAFDGIERIITRRLNMQAIGYSASKREETLDA
ENVLQYIIPKDLKEFGLIPEIIGRLPVLTHMNPLDRKTLRSILTEPRNAIIKQYEKLF
AMDGITFRITDQALDFIVDKAIEYKLGARGLRSLCEAVFTDAMFELPSTEETEFKVTK
PYAEEKLSFETINKLKAVS"
misc_feature 2366..3553
/gene="clpX"
/locus_tag="RB2501_03320"
/note="ATP-dependent protease ATP-binding subunit ClpX;
Provisional; Region: clpX; PRK05342"
/db_xref="CDD:180029"
misc_feature 2375..2491
/gene="clpX"
/locus_tag="RB2501_03320"
/note="ClpX C4-type zinc finger; Region: zf-C4_ClpX;
smart00994"
/db_xref="CDD:198062"
misc_feature 2579..>2932
/gene="clpX"
/locus_tag="RB2501_03320"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 2702..2725
/gene="clpX"
/locus_tag="RB2501_03320"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(2705..2728,2897..2899)
/gene="clpX"
/locus_tag="RB2501_03320"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 2885..2902
/gene="clpX"
/locus_tag="RB2501_03320"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 3287..3562
/gene="clpX"
/locus_tag="RB2501_03320"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; smart01086"
/db_xref="CDD:198154"
gene complement(3570..4112)
/locus_tag="RB2501_03325"
/db_xref="GeneID:8454354"
CDS complement(3570..4112)
/locus_tag="RB2501_03325"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193674.1"
/db_xref="GI:260060594"
/db_xref="GeneID:8454354"
/translation="MWGSKKGLWITSYLGYLQQYYDIVYYDSRQLADMDLPPVHTAED
VYHTFAETGMKRAAARLLSKEQEPADYLAFGGGGSIAWQAALMGLPVKSLYAVSPLCL
QKIGGNPECPVTLVYGEYHENRPAPLWFRQAGLEPEIISKFGQELYSDEKIIQKVCMD
LLKEVIEDRSGKPKKQLSAY"
gene complement(4371..4877)
/locus_tag="RB2501_03330"
/db_xref="GeneID:8454355"
CDS complement(4371..4877)
/locus_tag="RB2501_03330"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193675.1"
/db_xref="GI:260060595"
/db_xref="GeneID:8454355"
/translation="MAFTCLVHTQEYSESRTVEKTAGIGRNELKVNLVYTLLEVPEVT
YERILGPDSGIGVSVDLAVNDDIGYRFAIIPHYRFYFGKAYGGGFFLELNSLIGSIRD
EPLIDFGGEEESAQFAFGLGAATGVKFLTRTAWVAEIALGFGRYLASEQGMDYGYPRV
GITLGRRF"
gene complement(4998..6128)
/locus_tag="RB2501_03335"
/db_xref="GeneID:8454356"
CDS complement(4998..6128)
/locus_tag="RB2501_03335"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_003193676.1"
/db_xref="GI:260060596"
/db_xref="GeneID:8454356"
/translation="MDWIAVFNFLLIAGAIQGFVFNLGTFLIRRRIETPVLFLNLFVF
FLSLNNLQSWIIEKGFVPNTFFWANFQIPWNVLIVPMFYAFLVHYLSQQMERSVFWKQ
SASIFLALLIARITLVLAAGEGSVSVEILEHYTNLEDGIALVYSIFLFGRAWHLLKVY
PILKRHVLQGDNLRWVFRLMKLGALVILLWLFAVIMNSFSESFRPPYTYYPLRISSSL
LIYWVGYQAFFQYVLLQDRLALRKRLREKPAISIAHAVSSNERSEAGHEEFLELDAHV
RRNQRFLDPVLSQDRLAEELGMGTSTLSRLVNRFSGKNFSDYINSYRVAYARELLGNP
EFVRYTITSIGLESGFNSKSTFYTAFRKFLGQTPSAYRGKTG"
misc_feature complement(5013..5255)
/locus_tag="RB2501_03335"
/note="Helix-turn-helix domain; Region: HTH_18; pfam12833"
/db_xref="CDD:205096"
misc_feature complement(5013..5117)
/locus_tag="RB2501_03335"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene complement(6144..7673)
/locus_tag="RB2501_03340"
/db_xref="GeneID:8454357"
CDS complement(6144..7673)
/locus_tag="RB2501_03340"
/codon_start=1
/transl_table=11
/product="plant auxin-regulated protein"
/protein_id="YP_003193677.1"
/db_xref="GI:260060597"
/db_xref="GeneID:8454357"
/translation="MPIPLFNSIASWLLKKRYHQIELFLKYPGEVQQEVLTNLLEFAE
ETEIGQQYGFEGITSYEAYAGRVPLVTYEEFEPLIERTRRGEQNLFWPTEIRWFAKSS
GTTNARSKFIPVSSEALEDCHFKSGKDMLCLYLNNNPNSQLFTGKSLRLGGSKELYED
NGTYFGDLSAILIDNLPFWAELSSTPSNKVSLMSEWESKLQAICRESIRENVTSLAGV
PSWMLVLLNHILQETGKEHLHEIWENLEVYFHGGVSFNPYREQYRKLLPKESFQYYEI
YNASEGFFAIQDRNDSQDLLLMLDYGIFYEFIPMDSFGKPSQRVIPLWEVECGVNYAL
VITTNAGLWRYQIGDTVRFTSTSPYRIRITGRTKHHINVFGEELVIENAEEALRRSCR
EAGGSIAEYTAAPVFMSGNEKGAHEWLIEFRETPADIQAFSRLLDTHLQDLNSDYAAK
RYRNITLNPPTVHRARQNLFYDWLKSKGKLGGQHKVPRLSNTREYLEELMALNQRVGT
V"
misc_feature complement(6183..7628)
/locus_tag="RB2501_03340"
/note="GH3 auxin-responsive promoter; Region: GH3;
pfam03321"
/db_xref="CDD:190600"
gene 7734..8528
/locus_tag="RB2501_03345"
/db_xref="GeneID:8454358"
CDS 7734..8528
/locus_tag="RB2501_03345"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193678.1"
/db_xref="GI:260060598"
/db_xref="GeneID:8454358"
/translation="MQYEGVLRKMETEWDQPIRYYLLFPGDFVRMNDLLDRQVGLRFL
KYECLSCGLDRPIYRQGFCRSCFFETPQAGEWIMHPEKSKAHLDQEDRDLAYEKKVQL
QPHIVYLANSSNVKVGVTRKSQVPTRWIDQGAHEAIEIVETPNRYLAGITEVALKEHV
SDKTNWRKMLTNNLEDVDLFAWRNDLKPHIPEEALPYFIDSTQETQLEFPVLRYPEKV
KSLNLEKTPEFTGRLMGIKGQYLIFEDHTVFNVRGSEGYYVALEIA"
misc_feature 7839..8513
/locus_tag="RB2501_03345"
/note="Protein of unknown function (DUF2797); Region:
DUF2797; pfam10977"
/db_xref="CDD:151424"
gene 8625..9335
/locus_tag="RB2501_03350"
/db_xref="GeneID:8454359"
CDS 8625..9335
/locus_tag="RB2501_03350"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193679.1"
/db_xref="GI:260060599"
/db_xref="GeneID:8454359"
/translation="MSKFRDKLPDNWWTFALSAGIFCFLVGSYFFWPQAREFYDRAWE
VLTSGDQQQVRDWVRGFGWLGPAVIVGSMVVQMFLIVVPSVVLMIGSILSYGPFWGSL
VVFVAIFTASTIGYLIGRSLSKQTVKRLIGENSEKKVTRFLADYGFWAVVITRLNPIL
SNDAISFVAGVLGMNYWKFIGSTLLGIAPLTIALALVGGLSDSFKNGLIWVSAISAVL
FAAFVWWDRNRKKSRAEK"
misc_feature 8772..9332
/locus_tag="RB2501_03350"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG0398"
/db_xref="CDD:30747"
misc_feature 8805..9329
/locus_tag="RB2501_03350"
/note="Uncharacterized membrane-associated protein
[Function unknown]; Region: DedA; COG0586"
/db_xref="CDD:30931"
gene complement(9344..12091)
/locus_tag="RB2501_03355"
/db_xref="GeneID:8454360"
CDS complement(9344..12091)
/locus_tag="RB2501_03355"
/codon_start=1
/transl_table=11
/product="outer membrane assembly protein"
/protein_id="YP_003193680.1"
/db_xref="GI:260060600"
/db_xref="GeneID:8454360"
/translation="MKRKKLLKIVAGILVFLLLLVIGIPLFLEAKIGPILRSNVNRSI
TGDFDFREADLSLIRNFPNARVSLRDITLTTAAPFEGDTLFKAREAYLVMGIGELFKG
AGEPIGIRELFVSGADLRLRLDAEERPNYLVAAEDPAATGATAASDGFTFDLQGYQIA
DSKISYMDQSSGISFLLEDIQHTGSGDLSLAESRLETRTDARISLGMDSVQYLDRNSL
QLDARIGIDLETDTYTFLENEGLINQMPLVFEGSVQLVEEGQEIDLDFRTPSSDFKNF
LALIPEAYSKSLEEVRTSGQFTLEGSITGRSDDTRIPNLDIRMEAVDAAFRYPDLPKG
IDDINFSARLLNTTGIAGDTYLEIPAAGFRIDQDVFNMSGNIRSLTGNPEVDAALKGT
INLASLDQAYPVELAPGLSGVLRADVQTAFDMASVENKQYGNTRTSGSLQLSNLNFRA
DNFAEPVKIREARLRFDPVEARLESLSGSLGQSDFTLSGTVRDYLGYLLADGILKGQF
SLTSNQLLVSDFMSPEDPGQAEKETGADARASGQAPDGGPAFQIPAAIDVSIRGQAAS
VVYDGLPLRNVSGNLQIRDQELQLRDVRSDALDGKLALNGTVATGEGLPRFNMDLGID
GFRIRETLESIELFETLAPIASIVEGKLNSRVQLSGLLNSDFSPDLMSLAGNVVAEVL
ASDITGTRAKVLEALDARMDFFNMEDLDLKGLKTALNFENGLVTVKPFSFTYRDMEVS
VAGSHSFDQQLNYTATLQVPAKYLGSDVNRLVTELQEPGLKEATVPVVATIGGRYSDP
NVQTDLKQAVASLTSRLVEAQKQKLVASGKEKAKDLIGNLLKGSADSTRNSAPDSAKT
GLGSVLKDVVGSGRQDTTKAATGEKTTAGEQVGQSARKILGGLLGKKKDTAGTAKDTL
Q"
misc_feature complement(9698..10372)
/locus_tag="RB2501_03355"
/note="AsmA-like C-terminal region; Region: AsmA_2;
pfam13502"
/db_xref="CDD:205680"
gene complement(12200..12910)
/locus_tag="RB2501_03360"
/db_xref="GeneID:8454361"
CDS complement(12200..12910)
/locus_tag="RB2501_03360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193681.1"
/db_xref="GI:260060601"
/db_xref="GeneID:8454361"
/translation="MKQADQRVAYKAYLFLGALFITSLVVSNLIFQKFFYWKPFGEVE
VFGAPLFELSVGILPYPVTFLITDLISEIYGRKKANQVVTAGIFASFFSMGIVLLADR
VPAIAGSPVDDAVFSQVFALSPIAVLASMLAYLFAQYIDIAIYHFWKRLTRGRYLWLR
NNFSTFSSQIVDTFTVIFLLCTFGVLPWEAFYGLFVSGVIFKIFIAFLDTPLLYLFVY
IFRKRFGLAPNEELPLAF"
misc_feature complement(12305..12751)
/locus_tag="RB2501_03360"
/note="Uncharacterized ACR, YhhQ family COG1738; Region:
DUF165; pfam02592"
/db_xref="CDD:190356"
gene complement(12913..14667)
/locus_tag="RB2501_03365"
/db_xref="GeneID:8454362"
CDS complement(12913..14667)
/locus_tag="RB2501_03365"
/codon_start=1
/transl_table=11
/product="protease IV"
/protein_id="YP_003193682.1"
/db_xref="GI:260060602"
/db_xref="GeneID:8454362"
/translation="MAFLRNLLAAILGTLVALGIVFVMFLIFVSLAGSEEPVRIPDDS
VLELSFPYPINEYSGNDPGDPLAGLFDASQGLDEITKAIRLAAGDDRISGISLGGPYL
LAGITQTRAIRQALAEFRETGKFVYAYGDFYMQKDYYLSSVADSVFLNPVGTVDFKGL
AAEVLYFKEFQEKTGLQMEVVRHGKYKSAVEPFLSDSMSDDNREQLRELLASIWSSIR
EEISTSRGLSVDELDRIADGLLARTPERAVTTGLVDALIYRGEYDDLLARASGRGEDD
PKIVTLQDYIRATKNKRLHTGDSRIAIVYAQGEIFYGEGGPDYIGQVRMQEVFKKVRE
DEDIKAVVLRINSPGGSALTSEIIWREIMETRKEKPVVVSLSDVAASGGYYMAVAGDR
IVTEPTTITGSIGVFATIPNISSLSEKIGINAEQVGTHDMSVDYSFFEPMGDDFREVV
REGIEDTYETFLQRVADGRGISVAQADSLAQGRVWSGTDAVRLGLADALGGMPEALDT
AAELAGVESYRTLSLPKYKSGLERLMEDLGGAGEAAGQAALTDRLGAEWAGILEQIRE
QLQRKGVQARLPFILEIR"
misc_feature complement(12964..14661)
/locus_tag="RB2501_03365"
/note="signal peptide peptidase SppA, 67K type; Region:
SppA_67K; TIGR00705"
/db_xref="CDD:162004"
misc_feature complement(13864..14532)
/locus_tag="RB2501_03365"
/note="Signal peptide peptidase A (SppA) 67K type, a
serine protease, has catalytic Ser-Lys dyad; Region:
S49_SppA_67K_type; cd07018"
/db_xref="CDD:132929"
misc_feature complement(order(13930..13932,13939..13941,13945..13953,
14026..14028,14179..14190,14212..14214,14218..14220,
14263..14265,14374..14376,14515..14517))
/locus_tag="RB2501_03365"
/note="tandem repeat interface [polypeptide binding];
other site"
/db_xref="CDD:132929"
misc_feature complement(order(14020..14022,14032..14034,14338..14340,
14416..14418,14437..14439))
/locus_tag="RB2501_03365"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:132929"
misc_feature complement(14263..14265)
/locus_tag="RB2501_03365"
/note="active site residues [active]"
/db_xref="CDD:132929"
misc_feature complement(13138..13770)
/locus_tag="RB2501_03365"
/note="Signal peptide peptidase A (SppA), a serine
protease, has catalytic Ser-Lys dyad; Region:
S49_Sppa_N_C; cd07023"
/db_xref="CDD:132934"
misc_feature complement(order(13201..13203,13210..13212,13216..13224,
13294..13296,13441..13452,13474..13476,13480..13482,
13525..13527,13636..13638,13747..13749))
/locus_tag="RB2501_03365"
/note="tandem repeat interface [polypeptide binding];
other site"
/db_xref="CDD:132934"
misc_feature complement(order(13288..13290,13300..13302,13387..13401,
13405..13407,13600..13602,13678..13680,13699..13701))
/locus_tag="RB2501_03365"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:132934"
misc_feature complement(13525..13527)
/locus_tag="RB2501_03365"
/note="active site residues [active]"
/db_xref="CDD:132934"
gene 14762..15919
/locus_tag="RB2501_03370"
/db_xref="GeneID:8454363"
CDS 14762..15919
/locus_tag="RB2501_03370"
/codon_start=1
/transl_table=11
/product="deoxyguanosine kinase/deoxyadenosine kinase
subunit"
/protein_id="YP_003193683.1"
/db_xref="GI:260060603"
/db_xref="GeneID:8454363"
/translation="MEKSRETAYLSLGSNLGHRAWLLQQAVFRIGERAGRVSRISPVY
ESPSWGFEGGDFLNLCVEIQTSLSPVELLGTLLGIEKDLGRERDGTPGYTSRKVDIDI
LYYGNSTLSATGLEIPHPRIPERAFVLKPLADIAPQYYHPVLGKDTRNLLQACRDRSG
VTRSGIKIFPDRASQFADLGYIAIEGNIGAGKTTLAGKIAEDMNAKLILERFADNPFL
PKFYQDQARYAFPLEMSFLAERYQQFTEDTRQLDLFKRFMVSDYDIYKSLIFARITLQ
EDEFLLYRKLFTLMYQEVRKPRLYVYLYQHTDRLLRQIANRGRDYERGIPAEYLEKIH
RGYFDFMRNSPELNTLVIDVSELDFVANPEDYEQVLNEMSARILREGDVKV"
misc_feature 14783..15166
/locus_tag="RB2501_03370"
/note="7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
(HPPK). Folate derivatives are essential cofactors in the
biosynthesis of purines, pyrimidines, and amino acids as
well as formyl-tRNA. Mammalian cells are able to utilize
pre-formed folates after...; Region: HPPK; cd00483"
/db_xref="CDD:29601"
misc_feature order(14798..14800,14897..14902,14906..14908,14927..14929,
14933..14935,14978..14980,14990..14992,14999..15001,
15014..15016,15020..15022,15038..15040,15047..15049,
15056..15058,15062..15067,15107..15109,15116..15121,
15134..15136,15140..15142)
/locus_tag="RB2501_03370"
/note="catalytic center binding site [active]"
/db_xref="CDD:29601"
misc_feature order(14978..14980,14990..14992,14999..15001,15014..15016,
15020..15022,15047..15049,15062..15067,15107..15109,
15116..15121,15134..15136)
/locus_tag="RB2501_03370"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29601"
misc_feature 15302..15892
/locus_tag="RB2501_03370"
/note="Deoxynucleoside kinases [Nucleotide transport and
metabolism]; Region: COG1428"
/db_xref="CDD:31617"
misc_feature 15302..15850
/locus_tag="RB2501_03370"
/note="Deoxyribonucleoside kinase (dNK) catalyzes the
phosphorylation of deoxyribonucleosides to yield
corresponding monophosphates (dNMPs). This family consists
of various deoxynucleoside kinases including deoxyribo-
cytidine (EC 2.7.1.74), guanosine (EC 2.7.1; Region: dNK;
cd01673"
/db_xref="CDD:30191"
misc_feature order(15329..15331,15335..15340,15425..15427,15455..15460,
15572..15574,15710..15712,15725..15727)
/locus_tag="RB2501_03370"
/note="Substrate-binding site [chemical binding]; other
site"
/db_xref="CDD:30191"
misc_feature 15479..15481
/locus_tag="RB2501_03370"
/note="Substrate specificity [chemical binding]; other
site"
/db_xref="CDD:30191"
gene complement(16049..16585)
/locus_tag="RB2501_03375"
/db_xref="GeneID:8454364"
CDS complement(16049..16585)
/locus_tag="RB2501_03375"
/codon_start=1
/transl_table=11
/product="SpoU rRNA methylase"
/protein_id="YP_003193684.1"
/db_xref="GI:260060604"
/db_xref="GeneID:8454364"
/translation="MRKLKNEELGRLDVAAFKEAPKTPAVLILDNIRSLHNVGSVFRT
ADAFRVEKVWLCGITAQPPHKDIRKTALGATESVAWEYAGDTLQVLDRLETTHECWAL
EQAEGAVSLGEFRPEPGKRYAFVLGHEVKGVSQAVIDRCRGVVEIPQLGTKHSLNISV
AAGVLLWDFYLKQARDLE"
misc_feature complement(16085..16510)
/locus_tag="RB2501_03375"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
pfam00588"
/db_xref="CDD:201328"
gene 16756..19371
/locus_tag="RB2501_03380"
/db_xref="GeneID:8454365"
CDS 16756..19371
/locus_tag="RB2501_03380"
/note="This protein performs the mismatch recognition step
during the DNA repair process"
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein MutS"
/protein_id="YP_003193685.1"
/db_xref="GI:260060605"
/db_xref="GeneID:8454365"
/translation="MAAKKKKETPLMQQYNGIKKRYPDALLLFRVGDFYETFGADAER
AAEILDIVLTQRNNGGDQTALAGFPHHALNTYLPKLVKAGQRVAICDQLEDPKQTKTI
VKRGVTELVTPGVALGDDMLQAKSNNFLAAVHFGKLRMGISFLDVSTGEFFVSEGNRE
TTDKWLQNFSPKEILVSKNHRTDFREQFGTAYHTFNLEDWVFQEDYARETLTGHFKTS
SLKGFGIDAQPDGIVAAGAVLHYLGETRHRQLGHIGGVRRLASEDYVWMDRFTMQNLE
LFRTRDPGGVSLLDVVDHTRSPMGGRLLRQWLALPLKDLEAIRKRHRIVAHLNSHPEE
LGPMREQLRQMGDLERLIAKAAAGKITPRETVHLKNALQAVIPVKQRAAAAAEPALRD
LAGSLDDCQALRERIGAVLLEEAPAIIGKGRTVAPGFSEELDELRNLAGSGKDYLEQM
LKREQERTGITSLKIASNNVFGYYIEVRNTHKDKVPPEWIRKQTLVSAERYITEELKE
YEAKILGAEERILDLEQQLFAQLVVWMQEYIAPVQENARTLARLDCLCGFANLAGQHG
YVCPEMTDATDLRITQGRHPVIERQLPPGESYVPNDLHLDREQQQILMITGPNMSGKS
AILRQTALIVLLAQIGSFVPAEAARLGVTDKIFTRVGASDNISLGESTFMVEMNEAAS
ILNNLSERSLILLDEIGRGTSTYDGISIAWAIAEYLHQHPARAKTLFATHYHELNEMA
GSFARIKNYNVSVKELRDKVLFLRKLEPGGSHHSFGIHVARMAGMPGEVVRKAQKILV
QLEKSHAGEELTDGLHAVKEDMQLSFFNLDDPLLEQIREEILDLDIDTLTPVEALMKL
NEIKRLLKSKNRASS"
misc_feature 16756..19350
/locus_tag="RB2501_03380"
/note="DNA mismatch repair protein MutS; Provisional;
Region: PRK05399"
/db_xref="CDD:180056"
misc_feature 16780..17115
/locus_tag="RB2501_03380"
/note="MutS domain I; Region: MutS_I; pfam01624"
/db_xref="CDD:144998"
misc_feature 17137..17514
/locus_tag="RB2501_03380"
/note="MutS domain II; Region: MutS_II; pfam05188"
/db_xref="CDD:147397"
misc_feature 18037..18312
/locus_tag="RB2501_03380"
/note="MutS family domain IV; Region: MutS_IV; pfam05190"
/db_xref="CDD:203196"
misc_feature 18490..19146
/locus_tag="RB2501_03380"
/note="MutS1 homolog in eukaryotes. The MutS protein
initiates DNA mismatch repair by recognizing mispaired and
unpaired bases embedded in duplex DNA and activating endo-
and exonucleases to remove the mismatch. Members of the
MutS family possess C-terminal...; Region: ABC_MutS1;
cd03284"
/db_xref="CDD:73043"
misc_feature 18604..18627
/locus_tag="RB2501_03380"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73043"
misc_feature order(18613..18618,18622..18630,18736..18738,18841..18846,
18949..18951)
/locus_tag="RB2501_03380"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73043"
misc_feature 18727..18738
/locus_tag="RB2501_03380"
/note="Q-loop/lid; other site"
/db_xref="CDD:73043"
misc_feature 18751..18792
/locus_tag="RB2501_03380"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73043"
misc_feature 18829..18846
/locus_tag="RB2501_03380"
/note="Walker B; other site"
/db_xref="CDD:73043"
misc_feature 18853..18864
/locus_tag="RB2501_03380"
/note="D-loop; other site"
/db_xref="CDD:73043"
misc_feature 18937..18957
/locus_tag="RB2501_03380"
/note="H-loop/switch region; other site"
/db_xref="CDD:73043"
gene 19494..21191
/locus_tag="RB2501_03385"
/db_xref="GeneID:8454366"
CDS 19494..21191
/locus_tag="RB2501_03385"
/codon_start=1
/transl_table=11
/product="gamma-glutamyltranspeptidase"
/protein_id="YP_003193686.1"
/db_xref="GI:260060606"
/db_xref="GeneID:8454366"
/translation="MKKFLILIPILAFTLSTSAQDRLTGETHTTRSEILARNGMAATS
QPLATQVALDILKKGGTAMDAAIAANAVLGLVEPASCGIGGDIFAIVWDADDQKLYGF
NGSGRAPQSLSIDYFMERDMRYVPFSGPLPVTVPGCVDGWFALHKKFGELPMKEILQP
AIDYGREGFPVSEVIAYEMERSYPYSQDQPGFAETYMPNGRPPKKGEVFQNPDLASTY
EMIAKGGRDAFYKGDIARTIDSYMKKHDGFLSYEDLAAHTSNWVEPVSVNYRGYDIWE
LPPNGQGTAALQMLNILEGFDIASMGFGSTDYLHVLTEAKKLAYEDRAKFYSDPEFND
IPLEELLSDAYADQRRSLIDMDRAADSYPAGDMEIEAGNTTYLTVADEDGNMVSLIQS
IYSEFASGMVPDGLGFVLQNRGQMFNVQDPGHANALEPGKRPFHTIIPAFITKDGRPV
LSFGLMGGAVQPQGHTQIVVNIVDFGMNLQEAGDAPRMRHSGSSQPTGSKMTNGGTLN
LESGFDYQTVRELEKKGHAVAFAVGIYGGYQAIGVDLPNKVYTGASESRKDGQAAGY"
misc_feature 19590..21188
/locus_tag="RB2501_03385"
/note="Gamma-glutamyltransferase [Amino acid transport and
metabolism]; Region: Ggt; COG0405"
/db_xref="CDD:30754"
misc_feature 19650..21173
/locus_tag="RB2501_03385"
/note="Gamma-glutamyltranspeptidase; Region:
G_glu_transpept; pfam01019"
/db_xref="CDD:201554"
gene 21420..21492
/locus_tag="RB2501_t10132"
/db_xref="GeneID:8454367"
tRNA 21420..21492
/locus_tag="RB2501_t10132"
/product="tRNA-Gly"
/codon_recognized="GGC"
/db_xref="GeneID:8454367"
gene 21540..21624
/locus_tag="RB2501_t10134"
/db_xref="GeneID:8454368"
tRNA 21540..21624
/locus_tag="RB2501_t10134"
/product="tRNA-Leu"
/codon_recognized="UUA"
/db_xref="GeneID:8454368"
gene complement(22096..23964)
/locus_tag="RB2501_03390"
/db_xref="GeneID:8454369"
CDS complement(22096..23964)
/locus_tag="RB2501_03390"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193687.1"
/db_xref="GI:260060607"
/db_xref="GeneID:8454369"
/translation="MLSRILPTEYPLRLTAVLFAFVLLVSCGEETESAPDQKEALNAW
FDEKFEEELMMSPLQLTVMGRKELYDQIDDMSLEAQAEHLAWKEATVEELRSKFDYES
LDETDRTSYDLWIYQYEMEKAGEPFWGMNYVFDQMRGMHTTLPNFLINFHRVDSLPDM
EAYISRVGELGRAMEQLTARAREQAADGILPPKFAFETVLKQTRALLEGKPFTDSGDS
APLLADMERKIAALQEKGEITQEQADSLGQAAAEALTTSFEPAYRDLVAWLEAEMPNA
PESPTGVSRHPNGEAYYNHRLKASTTTDLTADEVHQIGLDEVARIQEEMRAIMEEVGF
EGDLKAFFEFVNTDEQFFFPNNDEGRQAYLDESTAYLDAMYAKLPDYFGILPKAGLDV
KRVETFREQDGAPQHYYPGTPDGSRNGTYYAHLSDMTAMPKSTMEGVAYHEGVPGHHM
QISIAQELESVPKFRTQAGFTAYSEGWGLYSESLAGEMGGYENPYYDFGRLVNEIWRA
IRLVVDTGLHSKGWTEADGIRYFEENSSIAPGAIKAEVQRYMVMPGQATAYKIGMLKI
QELRQKAETELGDQFDIRAFHDTILGGGAMPLELLERRVNEWIRETKAATPPIKEG"
misc_feature complement(22138..23799)
/locus_tag="RB2501_03390"
/note="Bacterial protein of unknown function (DUF885);
Region: DUF885; pfam05960"
/db_xref="CDD:203359"
gene complement(24103..24945)
/locus_tag="RB2501_03395"
/db_xref="GeneID:8454370"
CDS complement(24103..24945)
/locus_tag="RB2501_03395"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193688.1"
/db_xref="GI:260060608"
/db_xref="GeneID:8454370"
/translation="MKPFALIAISLILLTSCGEQSKNNTAASDAAQGADAGTQAQIPN
GEGGPTENRYPEALSRVLEAHGGLDAWKAQRTLTYVMPKETLSETHTIDLKTREDRID
TDDYSMGFDGERTWILDPDGTYEGNPEFYHNLMFYFYAMPFVLADPGIHYGSTPDLEF
EGKAYPGIRISYGEGVGITPEDEYYLHYDPDTGQMAWLGYTVTYRTGEPSDNVKWIRY
DNWQPVEGVLLPASISWYEYQGRQIGDRRNTVPFEQVALEETARPEGYYEKPEGAEFF
KKEE"
gene 25086..25730
/locus_tag="RB2501_03400"
/db_xref="GeneID:8454371"
CDS 25086..25730
/locus_tag="RB2501_03400"
/codon_start=1
/transl_table=11
/product="transport-related membrane protein"
/protein_id="YP_003193689.1"
/db_xref="GI:260060609"
/db_xref="GeneID:8454371"
/translation="MPGIIKKWLRRLLPVLLAPLVLIVVCNAVIEVATADRLYSDPDA
IPYSRVGLVLGTARHRAEGGMNPFYENRIAATLALYRAGKISFVLVSGDNGTIYYNEP
DTIKKDLVAGGIPAERIFLDYAGFRTLDSMVRAKIVFGLDTVTVISQEFHNERALYIA
GKKGLYARGFNARGVAGGAGTKLQVREYFARVKVFLDLLFNTQPRFYGNRIDIE"
misc_feature 25212..25658
/locus_tag="RB2501_03400"
/note="YdcF-like. YdcF-like is a large family of mainly
bacterial proteins, with a few members found in fungi,
plants, and archaea. Escherichia coli YdcF has been shown
to bind S-adenosyl-L-methionine (AdoMet), but a
biochemical function has not been...; Region: YdcF-like;
cd06259"
/db_xref="CDD:99750"
misc_feature order(25467..25469,25476..25478,25527..25529,25539..25541,
25548..25550,25644..25646)
/locus_tag="RB2501_03400"
/note="putative active site [active]"
/db_xref="CDD:99750"
gene 25811..27061
/locus_tag="RB2501_03405"
/db_xref="GeneID:8454372"
CDS 25811..27061
/locus_tag="RB2501_03405"
/codon_start=1
/transl_table=11
/product="NRAMP family protein"
/protein_id="YP_003193690.1"
/db_xref="GI:260060610"
/db_xref="GeneID:8454372"
/translation="MSRFRTLLKNLGPGLLFASMAIGTSHLVLSTKAGATYGWLMVIP
ILLANLLKYPFFEYGIRYTNVTGRSLVEGYSRLGRGWMWLYAFITLVTTFTILAALYV
VTAGLLANLFGISGVSVSLIALGLFAFISAALIIGRYSLLETTLKFVVTILFAALLVT
TVMVLYKAPVEAVEGFRRPPLMDSVGVLFLISLIGWMPTAVEASSWISLWSLEKYKGK
HGKPSLKDALQEFNTGYVTTALLAVFFLVIGHRTLYGTGTELSGNAVVFADQVVQLFT
THIGDWAYIFIAVSAFATMFSTCMTAHDAIARVSIDVLEYLRPKRRQFGKRWHYAMAI
LVLTGVNFMVLTAFGANMGNLVALATFISFVMAPLVGYMNLKNVTGGDMPATAKPGRV
LRVLTYAGILFLSLFAAYYCWLLL"
misc_feature 25811..27058
/locus_tag="RB2501_03405"
/note="Mn2+ and Fe2+ transporters of the NRAMP family
[Inorganic ion transport and metabolism]; Region: MntH;
COG1914"
/db_xref="CDD:32098"
misc_feature 25823..>26374
/locus_tag="RB2501_03405"
/note="manganese transport protein MntH; Reviewed; Region:
PRK00701; cl15845"
/db_xref="CDD:210245"
gene 27230..27421
/locus_tag="RB2501_03410"
/db_xref="GeneID:8454373"
CDS 27230..27421
/locus_tag="RB2501_03410"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193691.1"
/db_xref="GI:260060611"
/db_xref="GeneID:8454373"
/translation="MKLFSVARKTRNELRFTPRMGRLDTKVTYIRKHIFGIPFRTLHK
YRQTYYGEVKACTDCQLER"
gene complement(27423..29294)
/locus_tag="RB2501_03415"
/db_xref="GeneID:8454374"
CDS complement(27423..29294)
/locus_tag="RB2501_03415"
/codon_start=1
/transl_table=11
/product="OmpA family protein"
/protein_id="YP_003193692.1"
/db_xref="GI:260060612"
/db_xref="GeneID:8454374"
/translation="MSQKASRGDQAFFEYDYKTAIAEYLEEKRKSHLSPQQALNLAEA
YFRERQYKQAADQYVRIYREDSVMTNHHFNKMLQALSKSSEKERVQAFLSTRSSQLSD
ELLENASFNDELLEDTATGETAYTIFPANGNSPQADFSPAFYGKDRLLFSSSRPQDSK
DTYIPTGEAFTDIYVAALQSGGQLGNPNPLNSLPPLKYHEATPYYSESLQGVFYVRSN
SEDGALTYNPKGKNSLALVLSKRNGQLQTLLRDPGISFYYPFYEEATGRLYFAAEFQQ
GYGGTDLYYVVTNQGLIMSAPVNLGPRINTPGNEIAPFLVDGSLFFSSDVFYGLGGMD
IYKAEIQGDGTYSIPANLGPAINTEQDEFGFILRKSAGGGFEGYFASNRPGGRGSDDI
YGFTTTQKPGLKTLVVSGQVVSSEDAGVQQARVRLLDEADRVVRETYTRQNGAFRIEI
PWQENMRLSIDKPRYTSAALGGPGQDSIISGVPARIALRSVDEVVRSVRERQELKAEK
FYFGRGSSRLTDEIRTALQEPLQALRDFPGLHIRIEAHTDSRGSEQANLSLSRQRAEA
IRDYLVENGIDAERIEGIEGFGESQLQNHCEDGVYCLEILHRQNERYPLVVTNYESL"
misc_feature complement(<27891..28076)
/locus_tag="RB2501_03415"
/note="Carboxypeptidase regulatory-like domain; Region:
CarboxypepD_reg; pfam13620"
/db_xref="CDD:205798"
misc_feature complement(27498..>27770)
/locus_tag="RB2501_03415"
/note="Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Cell envelope
biogenesis, outer membrane]; Region: OmpA; COG2885"
/db_xref="CDD:32711"
misc_feature complement(<27522..27770)
/locus_tag="RB2501_03415"
/note="Peptidoglycan binding domains similar to the
C-terminal domain of outer-membrane protein OmpA; Region:
OmpA_C-like; cd07185"
/db_xref="CDD:143586"
misc_feature complement(order(27618..27620,27627..27632,27642..27644,
27651..27656,27753..27758))
/locus_tag="RB2501_03415"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:143586"
gene complement(29358..30353)
/locus_tag="RB2501_03420"
/db_xref="GeneID:8454375"
CDS complement(29358..30353)
/locus_tag="RB2501_03420"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193693.1"
/db_xref="GI:260060613"
/db_xref="GeneID:8454375"
/translation="MQKQPTRSIWNTCRVLGALVLLLAGASVAHAQREPLYTQYMYNI
GSFNPAYVGSVERPDLSLLYRAQWIDIPGAPRTIRFGANVPLGNRKHGLGFNAVNDQL
GPTSQTFVDFSYSFQVQFTYDVYLAFGLDAGGTFLNTDFSKGTFENPGEPILDQQNIN
EFYPTIGAGLFLYQDFWYVGVSVPNFLTDALYSNEVAQIVSDQLQFNFIGGYVFEFSD
NLKFKPAFLVNYMAGAPVTANVSANFLISDVVTAGAAYRFDNAVSGLAGFQISDNVFM
GYGYDYNTNGLGGYNSGTHEIIVKFYLGSGGGSDRDPDSGKSKKKGKQIDSPRFF"
misc_feature complement(29451..30260)
/locus_tag="RB2501_03420"
/note="Protein of unknown function (DUF3308); Region:
DUF3308; pfam11751"
/db_xref="CDD:204731"
gene complement(30355..35043)
/locus_tag="RB2501_03425"
/db_xref="GeneID:8454376"
CDS complement(30355..35043)
/locus_tag="RB2501_03425"
/codon_start=1
/transl_table=11
/product="aggregation factor core protein MAFp3, isoform
C"
/protein_id="YP_003193694.1"
/db_xref="GI:260060614"
/db_xref="GeneID:8454376"
/translation="MSPAFRLPGRNFLWAAFMLFTGVSAIGQNLSISDAQVVEGSGGG
TNLVFTVNNSVAFTSVTFQYDTFSGTAIDGSDFTGVSGGTGSIAFIPNNTTISIPITP
DLVPEPSETFTVVISNPSAGTISDDTAIGTILDDDQAISISNLSQAEGNAGNTSFSFT
VSVDGGGAAFEDIGFSFDTADGTATAGSGDYTAVSGGGGTILQGSNSTTVTVSVNGDT
TLEPDENFTGTISNVSNGRTGATPTATGTIQNDDAASVSIADASEGEGTGPLEFTVTL
DNAVQGGTTVSYSFTDGTATGGGTDYDSSAGTVTFAGTAGETETISVPLNNDAIVEAD
ENFTVTLSGPTNGVSLGTPSSATGTILDDDTVVVNFSAPSSSGNENTGANLPTLFVTG
TVTAATTVTVTATGGTANGGGIDYNFSSPQVVNIPAGVYDGTTATDIPIPTLSIVNDA
TPEPSETIVLGLSAPTGDATLGSTTSTTYTILNDDNQELQINNVSQAEGSGGGTTAFN
FSVSIVGGGNALQDLSFRVNTRDDSAAEPSDYARIQNQTFTIPAGQNSVVVPVSVVAD
DQAEPDETFDVEIDQPSAGAVIGANDVGVGTIQNDDQQGLVINNVSRDEGDSGNITFT
FQVSISGGGNALQDIDFSYSTQDGTATVADGDYQGLTNIGGTLPAGQSSVNIPVTVLG
DEKAEQNETFTVVLSNPQGGFIAQGTGTGTILNDDVNRISIGDVTQNEGNSGTTNFIF
TVTVDDGAVALQQIDFEYDTFPSGANPATPGEDYVSVSNGSGSIAAGETSTTISVTVN
GDTDLEPAETFSVEINNIDNAEPGDVTGVGTIQNDDQCDAGDVAPEPASDEDTTFCTG
DIIPPLTDFVVSNPPTNTVLTFSQNPDPLVVSNHLNQQQIDNPVAGTYYAFYYDSANN
CASPLFTITIVRNSTPVIDSFSGDERCGPGTVTLTAAGSIPGGSGNNPDLNWYDAPAG
GTLVFTGPNFTPSLSETTTFYVEAFANGCSSPREEVTALVSPLVTTGTATNGSACSVA
EFGPTIRDLDDRLTGADPGNWTVETDPSGGQLSIEPGNLVDFEGLPVGTYSFRYTTNV
AEAPCTEETVVIDIVVTTCDVDTDGDGLLDGVEADLGTDPNETDTDNDGIGDGTEVGP
DTDNPLDEDGDGIIDALDSNTADADQDGVNDQQDPANNNPCIPNADAGNCDVDLSVSK
TVNNPQAVIGQDVTFTITLSNLSVIEVEDIQVGDLLETGFQFVESTASAGAYDPQTGI
WTVDLIAAESVETLEITATVQPAGDYTNTAELLASTPFDGNPDNDTSTVTVEIVLPED
ADLSLQKSAQITPNGVFSGERIAPVVDDRIRFVIIVTNNSEDPVADILVEDILPEQAD
TGFEVLTPIPTQGSFNRDSGIWNIGTLSPGATAELSIPGYVRLATQFTNTARILSPAA
DADDSNNADDVLVVVSERNEGTPLFNQFSPNGDGTNDFLTIQLNRDSEDPGVTQTISA
YSIQIFNRYGQFVHEAINQTSPVIWDGNHKNQQAPEGTYFYILTYTYTTSINPEPVQV
TQKGWIQLIR"
misc_feature complement(34351..34581)
/locus_tag="RB2501_03425"
/note="Calx-beta domain; Region: Calx-beta; cl02522"
/db_xref="CDD:207627"
misc_feature complement(34018..34251)
/locus_tag="RB2501_03425"
/note="Calx-beta domain; Region: Calx-beta; cl02522"
/db_xref="CDD:207627"
misc_feature complement(32953..33216)
/locus_tag="RB2501_03425"
/note="Calx-beta domain; Region: Calx-beta; cl02522"
/db_xref="CDD:207627"
misc_feature complement(31276..31434)
/locus_tag="RB2501_03425"
/note="conserved repeat domain; Region: B_ant_repeat;
TIGR01451"
/db_xref="CDD:211657"
misc_feature complement(30364..30666)
/locus_tag="RB2501_03425"
/note="C-terminal domain of CHU protein family; Region:
CHU_C; pfam13585"
/db_xref="CDD:205763"
gene complement(35210..36097)
/locus_tag="RB2501_03430"
/db_xref="GeneID:8454377"
CDS complement(35210..36097)
/locus_tag="RB2501_03430"
/codon_start=1
/transl_table=11
/product="malonyl CoA-acyl carrier protein transacylase"
/protein_id="YP_003193695.1"
/db_xref="GI:260060615"
/db_xref="GeneID:8454377"
/translation="MKAYVFPGQGAQFSGMGKDLYDKFPQAQVLFEQANDILGFSITE
VMFNGSAEDLKKTEVTQPAIFLHSVILSRVLGDSFAPDMVAGHSLGEFSALVANNTLS
FEEGLKLVSQRARAMQKACEAQQSTMAAVLGLEDAVVEEVCARVDGTVVAANYNCPGQ
LVISGEVAAVEAACEQLKEAGARRALILPVGGAFHSPLMEPAREELAQAITKAKFSEP
SCPIYQNVTASAVTDIDAIRHNLIAQLTAPVRWTQSVRQMVADGATEFIEVGPGKVLQ
GLVKKIESGVAAESAQLPG"
misc_feature complement(35216..36097)
/locus_tag="RB2501_03430"
/note="(acyl-carrier-protein) S-malonyltransferase [Lipid
metabolism]; Region: FabD; COG0331"
/db_xref="CDD:30679"
misc_feature complement(35252..36097)
/locus_tag="RB2501_03430"
/note="malonyl CoA-acyl carrier protein transacylase;
Region: fabD; TIGR00128"
/db_xref="CDD:199994"
gene complement(36256..36801)
/locus_tag="RB2501_03435"
/db_xref="GeneID:8454378"
CDS complement(36256..36801)
/locus_tag="RB2501_03435"
/codon_start=1
/transl_table=11
/product="polyketide synthesis domain-containing protein"
/protein_id="YP_003193696.1"
/db_xref="GI:260060616"
/db_xref="GeneID:8454378"
/translation="MNRKKFMKTAGAGLGMALVPVSGVAARTRAFMASGNELEPKLVR
DADGNVHNVIGDIQTHKLVGADTGGQITEWVDNVPPGAGIPPHIHTREDEIFRVVQGE
VEIMVDGEVSVLKAGDMAFAPRNIPHAWKVVGTAKAKMITSAFPSGIEDMFYELAALP
EGPPDLAKVAEICAKQGIRFV"
misc_feature complement(36379..36570)
/locus_tag="RB2501_03435"
/note="Cupin domain; Region: Cupin_2; pfam07883"
/db_xref="CDD:203791"
gene complement(36886..37710)
/locus_tag="RB2501_03440"
/db_xref="GeneID:8454379"
CDS complement(36886..37710)
/locus_tag="RB2501_03440"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_003193697.1"
/db_xref="GI:260060617"
/db_xref="GeneID:8454379"
/translation="MKSESVIANTSSVRIVPISGRKNLGPEEGYYAVCWIQDEIPSLR
IGEYLEESVGNSLFFLSDSTHWCLDPGAGNTNPGYVLYIPYRLMNDPRMSRLHMNEVR
LLAGNEIPRVNPAPGIARRIQDLLEMLDELAGSHLNHRDEAILSLLNTFFIYLDGQCN
VRSVAAERNSKKNIVLRFKKLIYQRFETCHEVRDYADLLNISDKYLNECVNEVLGVNA
KSLIDEQRIMRSRHLLKFSDKAIKEISYELGFSSPDYFGFFLKKHTGMTPTMIRRS"
misc_feature complement(37243..>37416)
/locus_tag="RB2501_03440"
/note="Asp/Glu/Hydantoin racemase; Region: Asp_Glu_race;
cl00518"
/db_xref="CDD:212232"
misc_feature complement(36889..37128)
/locus_tag="RB2501_03440"
/note="Helix-turn-helix domain; Region: HTH_18; pfam12833"
/db_xref="CDD:205096"
misc_feature complement(36892..37002)
/locus_tag="RB2501_03440"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene complement(37784..38314)
/locus_tag="RB2501_03445"
/db_xref="GeneID:8454380"
CDS complement(37784..38314)
/locus_tag="RB2501_03445"
/codon_start=1
/transl_table=11
/product="hexapeptide repeat protein"
/protein_id="YP_003193698.1"
/db_xref="GI:260060618"
/db_xref="GeneID:8454380"
/translation="MSLVKPVRGKAPVFGADCFLAETAVVVGDVEMGDRCSVWFHAVV
RGDVNSIRMGDQVNVQDGAVIHCTFEKAATRIGNNVSIGHNAIVHGCTVRDNVLVGMG
SILMDHCDVGSYSIIAAGAVVPQGTVIPEGSIYAGVPARKIGEVRPELRTGEIERIAK
AYTRYSGWFREGSPED"
misc_feature complement(37799..38314)
/locus_tag="RB2501_03445"
/note="Carbonic anhydrases/acetyltransferases, isoleucine
patch superfamily [General function prediction only];
Region: PaaY; COG0663"
/db_xref="CDD:31007"
misc_feature complement(37817..38272)
/locus_tag="RB2501_03445"
/note="Gamma carbonic anhydrase-like: This family is
composed of gamma carbonic anhydrase (CA), Ferripyochelin
Binding Protein (FBP), E. coli paaY protein, and similar
proteins. CAs are zinc-containing enzymes that catalyze
the reversible hydration of carbon...; Region:
LbH_gamma_CA_like; cd04645"
/db_xref="CDD:100051"
misc_feature complement(order(38012..38014,38048..38050,38054..38065,
38117..38119,38129..38134,38174..38176,38180..38182,
38186..38191,38198..38200,38234..38236,38243..38248,
38252..38254,38258..38260))
/locus_tag="RB2501_03445"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:100051"
misc_feature complement(order(38048..38050,38063..38065,38117..38119))
/locus_tag="RB2501_03445"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:100051"
gene complement(38368..39096)
/locus_tag="RB2501_03450"
/db_xref="GeneID:8454381"
CDS complement(38368..39096)
/locus_tag="RB2501_03450"
/codon_start=1
/transl_table=11
/product="two-component system response regulator protein"
/protein_id="YP_003193699.1"
/db_xref="GI:260060619"
/db_xref="GeneID:8454381"
/translation="MELRAVLIDDEAQSREILRAYLGKYCENVEVLGEGANIEAGLEL
IRSKKPDLVFLDVEMPFGNAFDLLEQLPERSFETVFVTAYQQYAMDALNSHAAYYLMK
PISIDALVAAVDYVRDIKSREERLDNRVLQGVQAVSGKITIPQLDGFQVLEVADILYC
QADDNYTEIYLKSGKILVSKTLKYFEETLREHAFARVHKSYLVNVAEIVRYRKGKGGS
VVLSSGKEVAVAPSRKKQLLSFFE"
misc_feature complement(38749..39081)
/locus_tag="RB2501_03450"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(38755..39078)
/locus_tag="RB2501_03450"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(order(38788..38793,38800..38802,38851..38853,
38905..38907,38929..38931,39067..39072))
/locus_tag="RB2501_03450"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(38929..38931)
/locus_tag="RB2501_03450"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(38905..38913,38917..38922))
/locus_tag="RB2501_03450"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(38785..38793)
/locus_tag="RB2501_03450"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(<38461..38658)
/locus_tag="RB2501_03450"
/note="LytTr DNA-binding domain; Region: LytTR;
smart00850"
/db_xref="CDD:197918"
gene complement(39098..41095)
/locus_tag="RB2501_03455"
/db_xref="GeneID:8454382"
CDS complement(39098..41095)
/locus_tag="RB2501_03455"
/codon_start=1
/transl_table=11
/product="ATP-binding region, ATPase-like protein"
/protein_id="YP_003193700.1"
/db_xref="GI:260060620"
/db_xref="GeneID:8454382"
/translation="MGRNLFFAICLMLATPAAAQQDSLRPAQNEALEEAGQPAGRSAA
GNRDASGENLGALHRSLLDSAEAYMAGNIRKSLDFVTRSIEILGNRSNRRELARSLTK
LGEIYQFHRQYDLAVNSYRESIETAPSMRTTLLLGSAYVLNGDYQAALDLLDPERGRP
GWTPDQLADLHEIMGDAHRGLDRVNTAVSFYEYALTIADKNQMAARVPDLNSKIAEAF
DQANRTQEAEAYYGNSLRQAREQNPARALRESEKVADFYSKRSRYPEEIALRKQSLEQ
LRNLPPGREAPAQDSITPQGVNFKIGQAYLAQDKQEEAIPFLAQSMAEASSRGDLAVE
KDATRRLSEVYRNRGDYKRALELYQQYVALVDTLYTRKEQELEQAARFSREMASSQSR
IRTLEQERELSQSKYDLALAEQRLTGEINKRQKYIIYSLIFGLLLTGLAAFLYYRSNR
QKELANHLLALKGLRSQMNPHFIFNALNSVNNFIARNDERSANRYLSDFSLLMRTVLE
HSEKDFIPLSEELELLELYLKLEHDRFPDKFDYQIEVAPEVDVEAYHIPPMLLQPYLE
NAVWHGLRYKEEKGFLKVEVRPIGPRTISISISDNGVGRKRSAALKTKNQQRQKSRGM
GNIRRRIEILNQMYGDRIAVSVYDLNPDGSGTRVVLNLRSK"
misc_feature complement(40505..40798)
/locus_tag="RB2501_03455"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(40553..40558,40565..40570,40577..40582,
40670..40675,40682..40687,40691..40693,40778..40783,
40790..40795))
/locus_tag="RB2501_03455"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(40514..40516,40523..40525,40535..40537,
40571..40573,40616..40618,40637..40639,40649..40651,
40685..40687,40727..40729,40736..40738,40748..40750,
40784..40786))
/locus_tag="RB2501_03455"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(40004..40201)
/locus_tag="RB2501_03455"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature complement(39467..39715)
/locus_tag="RB2501_03455"
/note="Histidine kinase; Region: His_kinase; pfam06580"
/db_xref="CDD:203479"
misc_feature complement(39107..39424)
/locus_tag="RB2501_03455"
/note="Histidine kinase-like ATPases; Region: HATPase_c;
smart00387"
/db_xref="CDD:197694"
gene 41301..42491
/locus_tag="RB2501_03460"
/db_xref="GeneID:8454383"
CDS 41301..42491
/locus_tag="RB2501_03460"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193701.1"
/db_xref="GI:260060621"
/db_xref="GeneID:8454383"
/translation="MKQPLRDTHRPRLTPTQNRFRFRLLSILALLLLGGNLPGGKILA
APPEKNPGTRVQIALLLDTSNSMDGLIDQAKATLWDLVNEFSYVRCRENRVPDLEIAL
YEYGNDGLSPREGFIRQVLPFSSDLDEISGKLFSLRTNGGEEFCGQVIQSAVKQLRWS
RDARDLKFIFIAGNEPFNQGRTPYESVIRDAAEKDVVVNTIFCGDYRLGVNTLWADGA
RLGQGDYTAIDHNRAIVHVATPYDDRIIQLNKRLNKTYVAYGALGATRKQTQGEQDAN
AAEMEEAVMVERAVSKSSSFYRNESWDLVDAYQARKLNLEELNRKSLPGHLRELDTDG
LRDYLEKQQEERAEIQEAIRQADARRKAYLAKHQTDSAEGLQGALLEAVRKQARRKAY
TWVQ"
misc_feature 41463..41915
/locus_tag="RB2501_03460"
/note="Von Willebrand factor type A (vWA) domain was
originally found in the blood coagulation protein von
Willebrand factor (vWF). Typically, the vWA domain is made
up of approximately 200 amino acid residues folded into a
classic a/b para-rossmann type of...; Region: vWFA;
cd00198"
/db_xref="CDD:29222"
misc_feature order(41484..41486,41730..41732,41820..41822)
/locus_tag="RB2501_03460"
/note="metal ion-dependent adhesion site (MIDAS); other
site"
/db_xref="CDD:29222"
gene 42674..43723
/locus_tag="RB2501_03465"
/db_xref="GeneID:8454384"
CDS 42674..43723
/locus_tag="RB2501_03465"
/codon_start=1
/transl_table=11
/product="adenylate cyclase-like protein"
/protein_id="YP_003193702.1"
/db_xref="GI:260060622"
/db_xref="GeneID:8454384"
/translation="MIWLVLGWFVLFIQETATRSENLNPDSTITLTPAVFAFASLAVA
LIGFLVGILEVFWLGNRFRSRSFSRKLLYKLAFYSCFMLLVILIAYPLAAALELGASP
LNEAVMEKFWNFLSSVEFLSTMVAIAFSLFLSLFYSEISDNIGHGVLMNFFTGKYHQP
REEYRIFLFSDMKSSTSVAESLGHARYFEFLRAYYSDFSDAIVRHSGEVYQYVGDEVI
VSFTHANGVRGANCIRCFFAMQAALDKNAQWYMDTFGIVPEFKAALHVGRVTTGEIGA
LKKAIFFTGDVLNTTARMQALCNSYGVKVLISGELLGDLPLDGRYTVAPLGTQDLKGR
EKPVDLFTVSPAAEM"
misc_feature 43148..43714
/locus_tag="RB2501_03465"
/note="Adenylate cyclase, family 3 (some proteins contain
HAMP domain) [Signal transduction mechanisms]; Region:
CyaA; COG2114"
/db_xref="CDD:32297"
misc_feature 43172..43702
/locus_tag="RB2501_03465"
/note="cyclase homology domain; Region: CHD; cd07302"
/db_xref="CDD:143636"
misc_feature order(43178..43180,43184..43201,43304..43306,43310..43318,
43325..43327,43517..43525,43535..43540,43547..43552,
43667..43669)
/locus_tag="RB2501_03465"
/note="nucleotidyl binding site; other site"
/db_xref="CDD:143636"
misc_feature order(43184..43186,43316..43318)
/locus_tag="RB2501_03465"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143636"
misc_feature order(43199..43201,43235..43237,43244..43249,43256..43258,
43268..43270,43304..43309,43481..43483,43490..43492,
43520..43531,43538..43540,43667..43669)
/locus_tag="RB2501_03465"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143636"
misc_feature 43840..43905
/note="similar to hypothetical protein"
misc_feature 44196..44261
/note="similar to hypothetical protein"
gene complement(44351..45376)
/locus_tag="RB2501_03480"
/db_xref="GeneID:8454387"
CDS complement(44351..45376)
/locus_tag="RB2501_03480"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193705.1"
/db_xref="GI:260060625"
/db_xref="GeneID:8454387"
/translation="MRNLLLCTIACLAAAASPLSAQEGIPVYFDYLSDNYYLVHPSMA
GIGQGGKIRLTARQQWFSVDEAPNMQTLNAHYRIRDSRSGLGAILFNDANGYHSQTGL
KLTYAHHLPFGGDVRILNQLSFGISPTILQSSLDETEFRSVVPDPAVTGSKISATYFN
LDLGMSYSYQEFYAHVSILNLLETERELYRIGRADPDNVPVIDNLRRYLFSVGYIFGR
GEWRFEPSTMLQITEFTNEKAIDINAKAYKDVGFGTLWGGLSYRRSFDGAQYVQDGQF
GEQRLQLFTPIIGVNVNRFMFSYNYSYQSGDIRLDSGGFHQITLGYDFGPEREDRFDC
YCPAANY"
misc_feature complement(44411..45310)
/locus_tag="RB2501_03480"
/note="Protein of unknown function (DUF3308); Region:
DUF3308; pfam11751"
/db_xref="CDD:204731"
gene 45497..46399
/locus_tag="RB2501_03485"
/db_xref="GeneID:8454388"
CDS 45497..46399
/locus_tag="RB2501_03485"
/codon_start=1
/transl_table=11
/product="nifU related protein"
/protein_id="YP_003193706.1"
/db_xref="GI:260060626"
/db_xref="GeneID:8454388"
/translation="MEEYIITLKETNNPAILKFEANQPLVTKGSYEYKNIDEAKDSPL
AQQLFYLPFIKTVYISGNFVAMERFDIVTWDDVKQEVAQQLVEYLNAGEPVVDEPEQA
GRVAVTVYAEVTPNPAVMKYVANKQLVPDVFEFKDIDQARHSPLAQKLFGFPFVKEVF
MDHNYISVTKYEVAEWEDVSMELREFIREYLAAGGEVLEPGASAEKSQIAGVPEGNLE
QMDPISQEIAGILEEYVKPAVASDGGNIVFQSYEAESKTVHVILQGACSGCPSSTFTL
KNGIQTMLQNMMGDRVNEVVAING"
misc_feature 45512..45772
/locus_tag="RB2501_03485"
/note="Scaffold protein Nfu/NifU N terminal; Region:
Nfu_N; pfam08712"
/db_xref="CDD:204038"
misc_feature 45821..46078
/locus_tag="RB2501_03485"
/note="Scaffold protein Nfu/NifU N terminal; Region:
Nfu_N; pfam08712"
/db_xref="CDD:204038"
misc_feature 46148..46396
/locus_tag="RB2501_03485"
/note="Thioredoxin-like proteins and domains
[Posttranslational modification, protein turnover,
chaperones]; Region: COG0694"
/db_xref="CDD:31038"
gene 46466..46666
/locus_tag="RB2501_03490"
/db_xref="GeneID:8454389"
CDS 46466..46666
/locus_tag="RB2501_03490"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193707.1"
/db_xref="GI:260060627"
/db_xref="GeneID:8454389"
/translation="MAVLKVIEVLANSDKSWEDAAEKALAQASKSVDHIRSIYINEQS
CTVKDGKIASYRVNTKITFEVK"
misc_feature 46472..46663
/locus_tag="RB2501_03490"
/note="Dodecin; Region: Dodecin; pfam07311"
/db_xref="CDD:203610"
gene 46813..48858
/locus_tag="RB2501_03495"
/db_xref="GeneID:8454390"
CDS 46813..48858
/locus_tag="RB2501_03495"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193708.1"
/db_xref="GI:260060628"
/db_xref="GeneID:8454390"
/translation="MEKTPNDLIHETSPYLQQHAYNPVHWVPWTEANLQRAAEENKPL
LISIGYAACHWCHVMEHECFEDPEVAEVMNTLFIPIKVDREERPDVDQVYMDALQLMT
GSGGWPLNVAALPDGKPFWGATYLPRDRWLQALVQLGRLYREDPDRIREYADDLTSAV
ARINLPESDPNAALPGHGEISGWIDSMKPRFDGEYGGMQGAPKFMMPAALNLFLHQES
LHPDPTLEMHVNQTLTAMAFGGLFDQVGGGFSRYSVDARWHVPHFEKMAYDNAQLLSL
YARAFARYGDPLYREVVSRTTEFLLRDLAHPDGCFYSSLDADSRNRDGNLEEGAYYTW
REPELREALGGDYELFAAAYSIDTFGYWEDGKYVLIRREADADLAGRLGLPEPELRER
LQSCRDRLLRLRDKRDAPRLDDKVLTSWNGLLLSGLADAWRYCGLEKARDAAGKLANY
LDGEVTRKDGSVPHSTKGGSGGGHGFLEDYACLAAGYISWAEATGENTWMDRARNLCT
YALQYFGLPGEPLLYFNSSLDPALIRRSLETADNVIPASNSIMAKNLFVLGSYFGDAQ
WITRSREMLTAMVPSIGKYPGQYTNWMQLALWMSVPFYEVAVCGPDAMEQSATLRRNY
LPQCLLALSGEASDLPLFRGRFNPPKTRIFICREGSCKQPLEDSGKALELLRTYASD"
misc_feature 46813..48849
/locus_tag="RB2501_03495"
/note="Highly conserved protein containing a thioredoxin
domain [Posttranslational modification, protein turnover,
chaperones]; Region: COG1331"
/db_xref="CDD:31522"
misc_feature 46894..47244
/locus_tag="RB2501_03495"
/note="TRX domain, SSP411 protein family; members of this
family are highly conserved proteins present in
eukaryotes, bacteria and archaea, about 600-800 amino
acids in length, which contain a TRX domain with a redox
active CXXC motif. The human/rat protein; Region: SSP411;
cd02955"
/db_xref="CDD:48504"
misc_feature order(46969..46971,46978..46980)
/locus_tag="RB2501_03495"
/note="catalytic residues [active]"
/db_xref="CDD:48504"
gene 48956..49786
/locus_tag="RB2501_03500"
/db_xref="GeneID:8454391"
CDS 48956..49786
/locus_tag="RB2501_03500"
/codon_start=1
/transl_table=11
/product="Small-conductance mechanosensitive channel"
/protein_id="YP_003193709.1"
/db_xref="GI:260060629"
/db_xref="GeneID:8454391"
/translation="MEQFGDYQEHIEQGVEWFWNFLPSLVTAILTLVVGLWVISFINK
IVRRFFDKKDYDEALESFLQSFIKIALKLLLFVLVITQLGVKSSSLVAIVGAAGLAIG
LALQGSLSNFAGGVLILLFKPFRVGDWISAQGLDGTVKEINIFTTKLNTFGNQLAIIP
NGKLSNDNIVNYSAEDTRRDKITVGIGYGSNIKQAKDLLLEICGEDERILKDPEPQVF
VGELADSSVNLSLRFWAKNEDFWAAHFHVMETLKLRFDEAGIEIPFPQRDIHMISEGE
"
misc_feature <49013..49135
/locus_tag="RB2501_03500"
/note="Conserved TM helix; Region: TM_helix; pfam05552"
/db_xref="CDD:203274"
misc_feature 49154..49741
/locus_tag="RB2501_03500"
/note="Mechanosensitive ion channel; Region: MS_channel;
pfam00924"
/db_xref="CDD:201506"
gene 49860..50567
/locus_tag="RB2501_03505"
/db_xref="GeneID:8454392"
CDS 49860..50567
/locus_tag="RB2501_03505"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193710.1"
/db_xref="GI:260060630"
/db_xref="GeneID:8454392"
/translation="MKTIITTAACLLTLMATAQFNGNKLTQYHGQFEVVLYDFPPNGS
QFLDEIYKKGTITIENPDNTLKEERLMRFNAFTGQMVYLGQNGEEQSLLKRENITVEL
DGLTFEVHPYREGGDIDRGYFIPMNPGQQVVLYRRPIKHYRKPEVAEHGYEDTRMPAY
FDASEYFIRAGDAPMEPVSLRKNSLLAALGDHKDKLRDFVSENNLNVRKPEDALHLVV
YYNTLLASSPESTFASR"
gene complement(50548..51213)
/locus_tag="RB2501_03510"
/db_xref="GeneID:8454393"
CDS complement(50548..51213)
/locus_tag="RB2501_03510"
/codon_start=1
/transl_table=11
/product="glycoprotease family exported protein"
/protein_id="YP_003193711.1"
/db_xref="GI:260060631"
/db_xref="GeneID:8454393"
/translation="MAWILNLETASTNCSVALYEGSQLRALREDPSPGYSHGELLHVF
IQEVLSEAGVGADALDAIAVSKGPGSYTGLRIGVASAKGLCFSLEVPLIALPTLKVLA
AAAGIKEGLSIPMLDARRMEVYSAVLNTELEYVRETEAEILTPDSFAAYKDQGPLTLV
GSGAEKARELLSDPVFRFQPEIQPSARFMGPMAYAAFEAGSFEDLAYFEPYYLKDFIA
TRK"
misc_feature complement(50572..51204)
/locus_tag="RB2501_03510"
/note="universal bacterial protein YeaZ; Region:
bact_YeaZ; TIGR03725"
/db_xref="CDD:211869"
misc_feature complement(<50800..51105)
/locus_tag="RB2501_03510"
/note="Glycoprotease family; Region: Peptidase_M22;
pfam00814"
/db_xref="CDD:201456"
gene complement(51291..52676)
/locus_tag="RB2501_03515"
/db_xref="GeneID:8454394"
CDS complement(51291..52676)
/locus_tag="RB2501_03515"
/codon_start=1
/transl_table=11
/product="outer membrane transport/efflux protein"
/protein_id="YP_003193712.1"
/db_xref="GI:260060632"
/db_xref="GeneID:8454394"
/translation="MNTFKSIRPSRVLRVLFVLFAFSAGVIQAQKREWTLEECVTYAV
ENNLDVQQFQLAFERTMLDKSDAIGNLLPAVNAQTQVGRNVGFTIDPSTNAPTTAGIT
TASANLTASMTLFDGLRNINQLQRAKMNALASQYQLQDLVDDIRLNVANAYLNVLSNK
ESLKAFQAQYAVTEQDLNRIREQVDAGVLPRGDLLEIQATAANLEQQIVNAENNVLLS
RIVLAQLLQITDYENFDIADQEFEVPPSEILGNSPKVIFDKALTFRNDIAFSRSNVEL
AEQDLKIARGAYLPSLNAFFNYNTRYSSNTTLPDPANPGSFFSPTFIDQLWILDGISY
GARLDVPIFNGWSTRNNVKRAKIDVMRAELQLEQDKLALENDINTAYLDVQSFAKAYE
AAQKTLEARQLALEYARERYEVGLMNAFDYGQAQARVDDAQASVIQNKYNYIFRLKVL
EFYFGLPITLD"
misc_feature complement(51312..52574)
/locus_tag="RB2501_03515"
/note="type I secretion outer membrane protein, TolC
family; Region: type_I_sec_TolC; TIGR01844"
/db_xref="CDD:162556"
gene complement(52695..53807)
/locus_tag="RB2501_03520"
/db_xref="GeneID:8454395"
CDS complement(52695..53807)
/locus_tag="RB2501_03520"
/codon_start=1
/transl_table=11
/product="membrane fusion efflux protein"
/protein_id="YP_003193713.1"
/db_xref="GI:260060633"
/db_xref="GeneID:8454395"
/translation="MNKYVKYGLLVVVALGAFYAIARVLKTNSKPAELYETEKPSKQT
IVNRVVATGKVIPKEEVDIKPQISGIIDKIYLEEGAKVNAGDLIAVIKVVPNEQSLNQ
AQGRVRNAEIALGNAEIEYNRNKTLFDRGVISNQQFNDIQTTYEQAKQEVENARADYQ
IIRRGSAGGSSSANTNIRATVTGTILEIPVEEGDQVIQSNNFNDGTTIATIADLGQMI
FEGQVDEAEVGKLEIGMPLKITLGAIQDQEFEADLQFIAPKGVEEEGAVQFRIEGSVS
LDSAHFIRAGYSANASLVLSQKDSVLAVKEAWLQFDNETEKPYVEVKTGENEYERRDI
ETGISDGIFVEVLSGVTEEDEIKIWNKTEPMSSDES"
misc_feature complement(52740..53702)
/locus_tag="RB2501_03520"
/note="RND family efflux transporter, MFP subunit; Region:
RND_mfp; TIGR01730"
/db_xref="CDD:162505"
misc_feature complement(53634..53636)
/locus_tag="RB2501_03520"
/note="lipoyl-biotinyl attachment site [posttranslational
modification]; other site"
/db_xref="CDD:133456"
misc_feature complement(53487..53633)
/locus_tag="RB2501_03520"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature complement(52992..53279)
/locus_tag="RB2501_03520"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene complement(53848..55068)
/locus_tag="RB2501_03525"
/db_xref="GeneID:8454396"
CDS complement(53848..55068)
/locus_tag="RB2501_03525"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_003193714.1"
/db_xref="GI:260060634"
/db_xref="GeneID:8454396"
/translation="MATLSKNMLRTFLTTLGVIFAIVILIGLLGATNGMKNGFNQIFA
GTATNSMFLWAQRTSMPYKGFERGRSVDLSMDDVDMILREVPEVDVISPRIQLGNFRG
TVTVIRGGRSSGSSVYGDFPTIDLMSKKKMVEGRFLNQNDIQNSRKVCVIGVDAYKLL
FDKGENAIGESVRINGVYFTVVGIFKRNDNINFEGENTVFVPFTTFQTAFNSGDEVGW
MAILVDEDKSVAVAENKIKALLKRKYNIHPDDPRAFGSFDFSQIFEGISAFTMVLSGF
SFFVGIFTLLAGVIAVSNILLITVKERTNEIGIRRALGATPGVIKRQIIMESIVLTFF
AGLIGFIISIGLLHALDIAFGQTDDAPFTNPTVSPLQVIVSFTLMVTLSILIGMIPAN
RAVKVKPIDALREE"
misc_feature complement(54352..55059)
/locus_tag="RB2501_03525"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:205030"
misc_feature complement(53851..55047)
/locus_tag="RB2501_03525"
/note="ABC-type antimicrobial peptide transport system,
permease component [Defense mechanisms]; Region: SalY;
COG0577"
/db_xref="CDD:30922"
misc_feature complement(53872..54237)
/locus_tag="RB2501_03525"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
gene complement(55106..56335)
/locus_tag="RB2501_03530"
/db_xref="GeneID:8454397"
CDS complement(55106..56335)
/locus_tag="RB2501_03530"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_003193715.1"
/db_xref="GI:260060635"
/db_xref="GeneID:8454397"
/translation="MFNRDTWQEIWHSIKSNKLRTFLTGFSVAWGIFILVLLLASVNG
MQNGFYKQFNDDATNSIFIYPNATSKPYGGFEAGRRIQFKNDDLAFIKGSYEGSYEYI
SPRFNRSVSAKYKQETGTYTIVGVSPDHQLIERTVIESGRYLNKRDLRERNKVLVIGK
QVQKELFKDDDPVGQFLIANGLVYKVIGVFSDDGNEREESNIYAPYTTMQQIYGNTDE
INMIAMTYNPSYDFTRALAFSNTMEEVLKRRLVIHPEDQSAFFINNYAEGFSNIQTFS
NFLTFVAIGVGVLILIAGIVGIGNILIFIIKERTKEIGIRKALGARPIEIVKLILMES
IVITAFSGFGGMLFSMGVVALIAPIVDAPAFSNPNVDNTVVIICTVVLILAGVLAGLV
PSIRAANVKPIDALRAD"
misc_feature complement(55625..56305)
/locus_tag="RB2501_03530"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:205030"
misc_feature complement(<55319..55417)
/locus_tag="RB2501_03530"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
gene complement(56325..57029)
/locus_tag="RB2501_03535"
/db_xref="GeneID:8454398"
CDS complement(56325..57029)
/locus_tag="RB2501_03535"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_003193716.1"
/db_xref="GI:260060636"
/db_xref="GeneID:8454398"
/translation="MIEIKDLHKSYKMGSNSLHVLKGINFKAEEGELVAIMGSSGSGK
STLLNILGMLDEADEGDYILDGVPIKNLSETKAAKYRNKFLGFIFQSFNLINYKSALE
NVALPLYYQKVGRKERESKALKYLEQVGLKEWAHHLPNELSGGQKQRVAIARAMAAEP
KVLLADEPTGALDSTTSYEVMDLIQHINDQGNTILVVTHEEDIAHMCKRIIHLRDGII
VEDKKIEQVRASQYVQ"
misc_feature complement(56361..57029)
/locus_tag="RB2501_03535"
/note="ABC-type antimicrobial peptide transport system,
ATPase component [Defense mechanisms]; Region: SalX;
COG1136"
/db_xref="CDD:31331"
misc_feature complement(56376..57026)
/locus_tag="RB2501_03535"
/note="This family is comprised of MJ0796 ATP-binding
cassette, macrolide-specific ABC-type efflux carrier
(MacAB), and proteins involved in cell division (FtsE),
and release of liporoteins from the cytoplasmic membrane
(LolCDE). They are clustered together...; Region:
ABC_MJ0796_Lo1CDE_FtsE; cd03255"
/db_xref="CDD:73014"
misc_feature complement(56895..56918)
/locus_tag="RB2501_03535"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73014"
misc_feature complement(order(56433..56435,56529..56534,56760..56762,
56892..56900,56904..56909))
/locus_tag="RB2501_03535"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73014"
misc_feature complement(56760..56771)
/locus_tag="RB2501_03535"
/note="Q-loop/lid; other site"
/db_xref="CDD:73014"
misc_feature complement(56577..56606)
/locus_tag="RB2501_03535"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73014"
misc_feature complement(56529..56546)
/locus_tag="RB2501_03535"
/note="Walker B; other site"
/db_xref="CDD:73014"
misc_feature complement(56511..56522)
/locus_tag="RB2501_03535"
/note="D-loop; other site"
/db_xref="CDD:73014"
misc_feature complement(56427..56447)
/locus_tag="RB2501_03535"
/note="H-loop/switch region; other site"
/db_xref="CDD:73014"
gene complement(57126..58238)
/locus_tag="RB2501_03540"
/db_xref="GeneID:8454399"
CDS complement(57126..58238)
/locus_tag="RB2501_03540"
/codon_start=1
/transl_table=11
/product="transport/efflux component protein"
/protein_id="YP_003193717.1"
/db_xref="GI:260060637"
/db_xref="GeneID:8454399"
/translation="MKKSVTVVILVVIALTFGGSMYYLYKKNAEDPVVYQTEKPSRQN
IIKKTVATGSILPLEEVLIKPNISGVIEEIYVEGGDFVKSGDLIAKLKVVPNLSALND
AKNAIEDAKITLDDQRRNFSRQQTLFEKGVISQADLDRAQVSYDQAKQAYSAANKRYD
IVRTGTTSGLSSAANTLIRATVSGMVLEVPVEVGNQVIEANTFNEGTTIAAIADIDKM
IFEGKVDESEVGKIHEDLPLEITVGAIEDRVFPAVLDYIAPKGNEENGAIQFEIKGTL
TKRDSTFIRAGLSANASIILDRADSVIAVKEALVQFDPETKQPYVEVETGQQQFERRD
LELGISDGIWVEVRSGLEEDASIKVWNAISPSESGA"
misc_feature complement(57915..58064)
/locus_tag="RB2501_03540"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature complement(57153..58004)
/locus_tag="RB2501_03540"
/note="Membrane Fusion Protein cluster 2 (function with
RND porters); Region: 8a0102; TIGR00999"
/db_xref="CDD:162153"
misc_feature complement(57420..57707)
/locus_tag="RB2501_03540"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene complement(58302..59561)
/locus_tag="RB2501_03545"
/db_xref="GeneID:8454400"
CDS complement(58302..59561)
/locus_tag="RB2501_03545"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_003193718.1"
/db_xref="GI:260060638"
/db_xref="GeneID:8454400"
/translation="MFNRDRWKEILEVLTSNWFRTVLTAFGVFWGILILIILLAAGKG
LENGIKSDFGDIATNTMFIWTRRTTKAHMGLPKDREFSFKTSDRELLESRFPELRYIS
PRNQLGGFRGGSNVIRGIKTGAYNIYGDYPEIINQDPMGITAGRFLNQNDIREKRKIA
VIGEGVVSEMYDPGEEVLGSYLKIQGVNFMVVGTYKKKSNDGDGEEGQKQIFVPFTTF
SQAFNRADNVGWMAITANDGTSITSLKEQIVNTLKEKHKVHPDDQRAIGYFDLYEQYN
RVESLFGAMRFIAYFVGILVLLSGIIGVSNIMLIVVKERTKEIGIRRALGEQPWSIKL
QILLESIFLTIISGMAGIAMGALFIYAVNSLLDANGPVDMFMNPSVSLGVVVGALLIL
MASGLLAGFIPAQSAIRVKPIDALRTE"
misc_feature complement(58818..59522)
/locus_tag="RB2501_03545"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:205030"
misc_feature complement(58305..59507)
/locus_tag="RB2501_03545"
/note="ABC-type antimicrobial peptide transport system,
permease component [Defense mechanisms]; Region: SalY;
COG0577"
/db_xref="CDD:30922"
misc_feature complement(58326..58694)
/locus_tag="RB2501_03545"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
gene complement(59591..60835)
/locus_tag="RB2501_03550"
/db_xref="GeneID:8454401"
CDS complement(59591..60835)
/locus_tag="RB2501_03550"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_003193719.1"
/db_xref="GI:260060639"
/db_xref="GeneID:8454401"
/translation="MFDIERWQEIFDTIRKNKLRTFLTGLSVASGIFILVILLGFGQG
MQNGIAHEFEQDASTSVWVWPGMTTMEYKGMNPGRRIQLRNGNFEYWSRAEGDRIERE
SPRLFVRDVSVNYGNEALVYGIHGVASGFQFIENAKMSQGRFINLTDIESTAKVVVIG
DKIRKDVFGHLETPIGEYIEFSGLPFKIVGVYKELREREEETLYIPLTTAQKVFNGGD
RVSNLAYTLPPAGNFDQAVAEAVAFKDELRQYLQQAHTIAPEDTSAIQVWSAMEEAKR
YYSLTGNIKFFFWFVGICTIIAGVVGVSNIMLIVVKERTREIGIRKALGAKPWSIVGM
ILHEAIFVTALSGFFGLILSMGLLELVGPHVEVDYIMNPSVNLTVALSTVFVLILAGT
IAGFFPAWRAANIRVINALRDE"
misc_feature complement(60107..60805)
/locus_tag="RB2501_03550"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:205030"
misc_feature complement(59594..60784)
/locus_tag="RB2501_03550"
/note="ABC-type antimicrobial peptide transport system,
permease component [Defense mechanisms]; Region: SalY;
COG0577"
/db_xref="CDD:30922"
misc_feature complement(59615..59971)
/locus_tag="RB2501_03550"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
gene complement(60939..61157)
/locus_tag="RB2501_03555"
/db_xref="GeneID:8454402"
CDS complement(60939..61157)
/locus_tag="RB2501_03555"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193720.1"
/db_xref="GI:260060640"
/db_xref="GeneID:8454402"
/translation="MKHATAYVVLLVAALLAPEAANAQCAMCRAVLESSGDTSVAEGI
NNGIVYLMAIPYVLVGALIFLVYRKVRS"
gene complement(61163..61726)
/locus_tag="RB2501_03560"
/db_xref="GeneID:8454403"
CDS complement(61163..61726)
/locus_tag="RB2501_03560"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193721.1"
/db_xref="GI:260060641"
/db_xref="GeneID:8454403"
/translation="MENKNNGSPKAGNISVQEGKLNRWINGVSILIPVVVALLFGIRI
PDVEPLGFLPPIYATINGLTAVLLLAALWAIRTKRQVLHSRLMTTCIVLSLLFLVMYV
AYHMTSDSTPFGGEGYVRYLYYAILISHIVLSIAVIPLVLRTYAKAYLKDFRGHRRLA
RITFPVWLYVAVTGVVVYLMIAPYYPY"
misc_feature complement(61184..61579)
/locus_tag="RB2501_03560"
/note="Protein of unknown function (DUF420); Region:
DUF420; pfam04238"
/db_xref="CDD:146725"
gene complement(61716..62471)
/locus_tag="RB2501_03565"
/db_xref="GeneID:8454404"
CDS complement(61716..62471)
/locus_tag="RB2501_03565"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193722.1"
/db_xref="GI:260060642"
/db_xref="GeneID:8454404"
/translation="MAEKRNYNYIWIGAVILVFGAIFVPKIADRLGEGSVVERDRMSV
AAGSEAGSAPLEYITLNGERRKVPDFALTNQDSLLITDADYLGKVWVAEFFFTTCPTI
CPQMTANLVELQDELAEYEDFGVASFTINPRHDTPAVLKDYAERYGITDMDWHLLTGP
RDSIYELANAGFNIFAAEIPDVPGGFEHSGLFALIDREGYIRSRKDQFGNPIVYYRGT
ISRADGTNDTGETEQISLLKEDLLKLLKEENGK"
misc_feature complement(61866..62273)
/locus_tag="RB2501_03565"
/note="SCO (an acronym for Synthesis of Cytochrome c
Oxidase) family; composed of proteins similar to Sco1, a
membrane-anchored protein possessing a soluble domain with
a TRX fold. Members of this family are required for the
proper assembly of cytochrome c...; Region: SCO; cd02968"
/db_xref="CDD:48517"
misc_feature complement(61839..>62270)
/locus_tag="RB2501_03565"
/note="Uncharacterized protein SCO1/SenC/PrrC, involved in
biogenesis of respiratory and photosynthetic systems
[General function prediction only]; Region: COG1999"
/db_xref="CDD:32182"
misc_feature complement(order(61908..61910,62163..62165,62175..62177))
/locus_tag="RB2501_03565"
/note="Cu(I) binding site [ion binding]; other site"
/db_xref="CDD:48517"
gene complement(62481..63122)
/locus_tag="RB2501_03570"
/db_xref="GeneID:8454405"
CDS complement(62481..63122)
/locus_tag="RB2501_03570"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193723.1"
/db_xref="GI:260060643"
/db_xref="GeneID:8454405"
/translation="MKKKFVLTVLFILPLVVYMFFASGVTNFGRLPVLSGPVSELDGF
AGEQRLQGKITVLGFLGDSVELQQGRMFNLNQKIYKRFHEFQDFQMLMVAPDGTQQKV
AGVMRELETFTDIGNWRFVYGEMPEIRRFFNSLETGLELDATGATPYVFIIDKDRMLR
GRKKDEDTGLKFGFDATSVADLNNKMEDDMKIILAEYRLALKSNQAGRNTQEQ"
gene 63516..63662
/locus_tag="RB2501_03575"
/db_xref="GeneID:8454406"
CDS 63516..63662
/locus_tag="RB2501_03575"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193724.1"
/db_xref="GI:260060644"
/db_xref="GeneID:8454406"
/translation="MEATQKGGIKNGKCELVSQNLPPGALAQENSEGFRRDLFKFQGA
FRSA"
gene complement(63744..64127)
/locus_tag="RB2501_03580"
/db_xref="GeneID:8454407"
CDS complement(63744..64127)
/locus_tag="RB2501_03580"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193725.1"
/db_xref="GI:260060645"
/db_xref="GeneID:8454407"
/translation="MAHEHKLEIFRGLLKFRSNTQKIWGVLIFLSIVTAIEVALGILK
PAALTGNYFLGMKLLNWIFIILTLVKAYYIAWDFMHLRDEKSSLRRAIVWTPIFLVAY
LIFILLFEADYIYNVWKDGFVAWDF"
misc_feature complement(63810..64061)
/locus_tag="RB2501_03580"
/note="Prokaryotic Cytochrome C oxidase subunit IV;
Region: COX4_pro; pfam03626"
/db_xref="CDD:202705"
gene complement(64149..65123)
/locus_tag="RB2501_03585"
/db_xref="GeneID:8454408"
CDS complement(64149..65123)
/locus_tag="RB2501_03585"
/codon_start=1
/transl_table=11
/product="cytochrome c oxidase subunit III"
/protein_id="YP_003193726.1"
/db_xref="GI:260060646"
/db_xref="GeneID:8454408"
/translation="MDTTVTTTAEEKVWGGGNRPLGASYGKLMMWFFIVSDALTFSGF
LASYGFSRFKFIETWPIADEVFTHVPFFHGTYPMYYVAFMTFILIMSSVTMVLAVDAG
HRMMKNRVILYMFLTIIGGAIFVGSQAWEWATFIRGDYGAVETKGGRILQFVNADTGE
RAALADFVVPQADARVEHDRDNGVWFEAEGTLPTYTVEEVAAGLRANPNILIRTETIN
EEGEKTILNREESLDKIRDARLVVEGANLIRNEYGSRLFADFFFFITGFHGFHVFSGV
VINVIIFFNVILGTYERRKHYEMVEKVGLYWHFVDLVWVFVFTFFYLV"
misc_feature complement(<64707..65066)
/locus_tag="RB2501_03585"
/note="Heme-copper oxidase subunit III. Heme-copper
oxidases are transmembrane protein complexes in the
respiratory chains of prokaryotes and mitochondria which
couple the reduction of molecular oxygen to water to,
proton pumping across the membrane. The...; Region:
Heme_Cu_Oxidase_III_like; cl00211"
/db_xref="CDD:185830"
misc_feature complement(order(64992..64997,65007..65009,65049..65054))
/locus_tag="RB2501_03585"
/note="Subunit I/III interface [polypeptide binding];
other site"
/db_xref="CDD:29484"
misc_feature complement(64152..>64406)
/locus_tag="RB2501_03585"
/note="Heme-copper oxidase subunit III. Heme-copper
oxidases are transmembrane protein complexes in the
respiratory chains of prokaryotes and mitochondria which
couple the reduction of molecular oxygen to water to,
proton pumping across the membrane. The...; Region:
Heme_Cu_Oxidase_III_like; cl00211"
/db_xref="CDD:185830"
gene complement(65214..65804)
/locus_tag="RB2501_03590"
/db_xref="GeneID:8454409"
CDS complement(65214..65804)
/locus_tag="RB2501_03590"
/codon_start=1
/transl_table=11
/product="cytochrome o ubiquinol oxidase subunit III"
/protein_id="YP_003193727.1"
/db_xref="GI:260060647"
/db_xref="GeneID:8454409"
/translation="MKNRDLTQQPDPIKKERASKMMLWFGIVSLIMTFAGWTSAYIVS
SSREDWMEDFQLPMAFWYSTGILLLSSLTYMMALRSVRQGQQRAGSLWLGITLVAGLV
FIYSQFSGFSQMIGYGYYFTGPTSNITLSYLFLIAAVHIAHVVAGLISLVVVVVKQLR
GKYGPGRMLGMELGSTFWHFLDLLWVYLMLFFYFFG"
misc_feature complement(65217..65765)
/locus_tag="RB2501_03590"
/note="Heme/copper-type cytochrome/quinol oxidase, subunit
3 [Energy production and conversion]; Region: CyoC;
COG1845"
/db_xref="CDD:32030"
misc_feature complement(order(65400..65402,65412..65414,65421..65426,
65694..65699,65709..65711,65751..65756))
/locus_tag="RB2501_03590"
/note="Subunit I/III interface [polypeptide binding];
other site"
/db_xref="CDD:29484"
gene complement(65801..66700)
/locus_tag="RB2501_03595"
/db_xref="GeneID:8454410"
CDS complement(65801..66700)
/locus_tag="RB2501_03595"
/codon_start=1
/transl_table=11
/product="protoheme IX farnesyltransferase"
/protein_id="YP_003193728.1"
/db_xref="GI:260060648"
/db_xref="GeneID:8454410"
/translation="MKSATGTAETGAIQLAFTDFKEITKARLAISVVFSAVAGYLLGA
SEIRAVPLLLLVLGGYCMVGASNAYNQVIERSLDKRMHRTRHRPIPSGRMRVSTAMAI
AIVMTLAGVALLYQLNPRTAFFGALSIFLYTCVYTPLKTVTPLAVFVGAIPGAIPFML
GWVAATDNFGIEPGTLFMIQFFWQFPHFWALGWMLDEDYRRGGFKMLPTGKKDTGTVV
QIIMYTIWMIVISIIPVFGITGRLSLSVPAAVLIFLMGLVMLWFALRLYELRDRQSAR
SLMLSSVTYITLMQIVYVVDSFI"
misc_feature complement(65804..66646)
/locus_tag="RB2501_03595"
/note="protoheme IX farnesyltransferase; Provisional;
Region: PRK04375"
/db_xref="CDD:179840"
gene complement(66818..67522)
/locus_tag="RB2501_03600"
/db_xref="GeneID:8454411"
CDS complement(66818..67522)
/locus_tag="RB2501_03600"
/codon_start=1
/transl_table=11
/product="TonB"
/protein_id="YP_003193729.1"
/db_xref="GI:260060649"
/db_xref="GeneID:8454411"
/translation="METKKSPKADLRRNSGLYFVLGLALVMALVYVALEWKTYDEVNN
YDISMDVEELLDEEVPMTEQIKTPPPPPPPAAPEVIEVVEDEEEVEETIIESTETSQE
EEIIEVDDVVVEEVEEDIDVPFAVIEDVPVFPGCEGASDKRACFNEMMQKHIRKNFRY
PEIAQEMGIQGRVSVMFTIQKDGSIGNIRLRGPDKNLEAEARRIIERLPKMTPGKQRG
RAVRVPFSIPIMFKLQ"
misc_feature complement(66821..>67108)
/locus_tag="RB2501_03600"
/note="Periplasmic protein TonB, links inner and outer
membranes [Cell envelope biogenesis, outer membrane];
Region: TonB; COG0810"
/db_xref="CDD:31152"
misc_feature complement(66824..67057)
/locus_tag="RB2501_03600"
/note="Gram-negative bacterial tonB protein; Region: TonB;
pfam03544"
/db_xref="CDD:202680"
gene complement(67577..67936)
/locus_tag="RB2501_03605"
/db_xref="GeneID:8454412"
CDS complement(67577..67936)
/locus_tag="RB2501_03605"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193730.1"
/db_xref="GI:260060650"
/db_xref="GeneID:8454412"
/translation="MAAVTYACLAPFDDLDDPGFELPHADKIAHFTFYLIAAVLGVLA
LRERAGRRVGLNGALWLAAVVLTAYGGVIEALQAVLPTGRSPEWGDFLANSLGLLAAV
ASLKVAFHELGALNWPD"
misc_feature complement(67628..>67927)
/locus_tag="RB2501_03605"
/note="VanZ like family; Region: VanZ; cl01971"
/db_xref="CDD:207507"
gene complement(67971..68351)
/locus_tag="RB2501_03610"
/db_xref="GeneID:8454413"
CDS complement(67971..68351)
/locus_tag="RB2501_03610"
/note="part of multienzyme complex composed of H, L, P,
and T proteins which catalyzes oxidation of glycine to
yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a
reduced pyridine nucleotide; protein H is involved in
transfer of methylamine group from the P to T protein;
covalently bound to a lipoyl cofactor"
/codon_start=1
/transl_table=11
/product="glycine cleavage system protein H"
/protein_id="YP_003193731.1"
/db_xref="GI:260060651"
/db_xref="GeneID:8454413"
/translation="MNIPSELKYTKDHEWVRIEGDTAIVGITDFAQGELGDIVYVEVD
ALDEELEREAVFGTVEAVKTVSDLFLPLSGEIVEFNEALEDEPEKVNTDPYGDGWMIK
IKLSDPSEADDLLTPDDYKELIGG"
misc_feature complement(68043..68327)
/locus_tag="RB2501_03610"
/note="Glycine cleavage H-protein. Glycine cleavage
H-proteins are part of the glycine cleavage system (GCS)
found in bacteria, archea and the mitochondria of
eukaryotes. GCS is a multienzyme complex consisting of 4
different components (P-, H-, T- and...; Region: GCS_H;
cd06848"
/db_xref="CDD:133457"
misc_feature complement(68163..68165)
/locus_tag="RB2501_03610"
/note="lipoyl attachment site [posttranslational
modification]; other site"
/db_xref="CDD:133457"
gene complement(68441..75625)
/locus_tag="RB2501_03615"
/db_xref="GeneID:8454414"
CDS complement(68441..75625)
/locus_tag="RB2501_03615"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193732.1"
/db_xref="GI:260060652"
/db_xref="GeneID:8454414"
/translation="MKTGASAFYTKYRLSLFSLLFLLVFAALPAHAQDGETEADSVQT
GVALGSLRMENPPSIVSKYTYDAKLDRYIYTESVGNYDISYPIILTPEDYFELVRREG
MKSYFKDKIDAFSGRKEGSEEARKNLLPNFYVNNSFFETIFGGNTIEVIPQGSVAMDL
GVIWQKNDNPALSPRNRTNLAFDFDQRISLSMLGQIGERLQITAQYDTEATFDFQNLI
KLDYTPTEDDIIQKIEIGNVNMPLNSSLISGAQSLFGVKTQLQFGKTTVTAVFSEQRS
QSNTVVAQGGGTINEFELTALDYDEDRHFFLSQYFRDQYDQALADYPYINSQVQITRL
EVWVTNRSQQTLNVRNVVAIQDLGESLPEKTRIGQAGGAPGGFFNSGGAPVNLPRNGA
NDYDPALIGSGGVLTPDIRDIATVDDGFQIPGGYTVNQGFDYAILENARKLDQGRDYA
FNSQLGYISLNQRLSNDEVLAVAFQYTYNGQIYQVGEFANGGLDATSVSPGAQVEINN
NTLVLKLLKSNITNVSDPIWDLMMKNIYATGAFQLSEEDFKLNILYNDPTPRNYITPV
NPDVGWPDTPRPLEERILLDVFNLDRLNVYNDVQPGGDGFFDFVPGITVNTQNGQIIF
TKVEPFGEYLFELLGGGTYDVDDDQGYNQNQQKYVFRNMYNQTKAASLQDAEKNRFRI
KGRYKSETGNGIPIGAFNVPRGSVRVTAGGRQLQEGIDYTVNYQAGTVQILDPSLQAS
NTPINISVENNAVFGQQTRRFTGVNVEHQFNENFVLGATLLNLNERPLTQKANFGVEP
VNNTIFGLNGNFSTEVPFLTRLANMLPNVDTDVASNLSLRGEVAFLKPNAPDNANFRG
ETTSYLDDFEGAQALIDIRASLGWSLASTPLEFLDEGEEDLETGYERAKLAWYTIDPI
FYTNQRPPGISDNDISLNATRRIFIDEVFPRIDIAQGQTTVQNTLDLAYYPNLKGPYN
ANPNFEAESPQEKWGGIMRSLSSTNFEQSNVEFVQFWVLDPYVDGQATGPGELVINLG
NISEDILEDGRKQYENGLPGVNSNDLTTQTIWGRVPATQALVYAFDADETNRSLQDIG
YDGLADADEAAEGYNGPAEDPALDNYTYYLNREGSLLERYLDFNNTEGNSPVAVTNTN
RGNTTLPDVEDVDRDLTMNTVNSYYEYRIPIRPGVTVDDPYVTDIKEGVTPNLPNGTQ
LNRRWIQYKIPLSDFTDAVGGITDFRSISFMRMYVTGFTDPVVLRFATLDLVRGDWRN
YTKTLQTNNDNPADDGTSVDVNTVNVEENEARIPIPYVLPPGVVREQLNNNNTIVRQN
EQSLSMVVENLEPEDSRGVFKNVSMDMRQYQRIKMFLHAEKIAQSDPFLNTESLVGFL
RIGTDFSENFYQIEVPLEFTDFSASTAEQVWPAINELDVALDDLNKVKSEGIASQTLG
EITFYEVIDGVAVEVDEFAPRQPGRARIGIRGNPSLGSIRSMMVGVKNIDNIPLRAEV
WFNELRLAGLDNNGGWAAVAAVDANMADFANVSATGNTSTSGFGAIDQMPNERAREDA
ISYDVVTNVEIGKLFPAKWNLQIPFNYGISEQLITPEFDPVYDDLKLEDRIAAADSPA
DAEQIREQAEDYTKRTSINFIGVRKNRGEEAEANFFDIENFTFNYSYNETDHRDFEVA
ELRDQNVQAGVVYNHNFKPVPVAPFAKNDSLFRGSYWQWLKELNFNLLPTSISLQSDI
NRQFNQQRFRDVLEPGVETLELPLLQQRNYRFNWQYNLNYALTKSLRVQLTGSNNSIV
RNYYEEEGNPFSNILADRTLWDGFFDIGEPNRHAQQMTLNYEIPLSKIPIFDFVNAQY
TYTSNFDWQRGGDALNLAVAKAQNPGIPEDQLSLSSINTIQNANTHTLTAALSMQRLY
DKLGLKKSTGKPTTGIAAPRTDKAGNAREDGESAAPKRTGKAFNTAIDLLTMVKRINV
NYSENNGTVLPGYTQSVGFIGTTRPTVGFVFGSQADVRQLAAQNGWLTNFNEFNEQFV
QRTSKQLNITATAQPVPELTIDLIADRQYSETLQENFNVTDGEYIPQAPNTYGSFSIS
TMMLATAFNRSDEQSSETFEAFKDNRLTIANRLLSDRNGADIGVDDDGFPIRYGKTQQ
EVLLPAFFAAYTGQDAERVNLDTFRDIPIPNWNIKYTGLMKNKWFQKQFKRFSLSHGY
RSAYTINSFQTNLERYQLVNDNDPGTNPFEVETGDLMPEILINNVVLNDAFNPLVRVD
FEMQNSVSVLAEVRMDRALSLSFDNNLLTEINGKEYTLGLGYRFKDVQFVTRIGGERQ
RLKGDLNLKADLSLRDNITIIRNLDLDSNQITSGQNLVSIKFTADYALSKNLNALFFY
DHSFSEFAVSTAFPQTTINTGFTLRYNFGN"
misc_feature complement(68447..75478)
/locus_tag="RB2501_03615"
/note="cell surface protein SprA; Region: surface_SprA;
TIGR04189"
/db_xref="CDD:211912"
misc_feature complement(74231..75439)
/locus_tag="RB2501_03615"
/note="Motility related/secretion protein; Region: SprA_N;
pfam14349"
/db_xref="CDD:206517"
misc_feature complement(72677..73663)
/locus_tag="RB2501_03615"
/note="Motility related/secretion protein; Region: SprA_N;
pfam14349"
/db_xref="CDD:206517"
misc_feature complement(72362..>72643)
/locus_tag="RB2501_03615"
/note="Bacterial L-asparaginases and related enzymes;
Region: L-asparaginase_like; cl00216"
/db_xref="CDD:211432"
misc_feature complement(70817..72325)
/locus_tag="RB2501_03615"
/note="Motility related/secretion protein; Region: SprA_N;
pfam14349"
/db_xref="CDD:206517"
gene complement(75631..76212)
/gene="ruvA"
/locus_tag="RB2501_03620"
/db_xref="GeneID:8454415"
CDS complement(75631..76212)
/gene="ruvA"
/locus_tag="RB2501_03620"
/note="plays an essential role in ATP-dependent branch
migration of the Holliday junction"
/codon_start=1
/transl_table=11
/product="Holliday junction DNA helicase RuvA"
/protein_id="YP_003193733.1"
/db_xref="GI:260060653"
/db_xref="GeneID:8454415"
/translation="MIEHLTGRLIEKHPTHLVIECAGVGYFVNISLNTFSALPDEEQL
RIYTHLQVREDAHTLFGFYSVAEREAFRLLISVSGVGASTARTMLSSMTPAQLREAIA
SGDVPAIQAVKGIGAKTAQRVILDLRDKILKIYDLDEVSLKPDNTNKEEALSALEVLG
YSRKQSEKAVDTVLRQDPSASVEGIIKQTLKNL"
misc_feature complement(75634..76212)
/gene="ruvA"
/locus_tag="RB2501_03620"
/note="Holliday junction DNA helicase RuvA; Reviewed;
Region: ruvA; PRK00116"
/db_xref="CDD:178876"
misc_feature complement(76030..76212)
/gene="ruvA"
/locus_tag="RB2501_03620"
/note="RuvA N terminal domain; Region: RuvA_N; pfam01330"
/db_xref="CDD:201732"
misc_feature complement(75640..75765)
/gene="ruvA"
/locus_tag="RB2501_03620"
/note="RuvA, C-terminal domain; Region: RuvA_C; pfam07499"
/db_xref="CDD:203653"
gene complement(76258..78552)
/locus_tag="RB2501_03625"
/db_xref="GeneID:8454416"
CDS complement(76258..78552)
/locus_tag="RB2501_03625"
/note="NADP-dependent; catalyzes the oxidative
decarboxylation of malate to form pyruvate; decarboxylates
oxaloacetate"
/codon_start=1
/transl_table=11
/product="malic enzyme"
/protein_id="YP_003193734.1"
/db_xref="GI:260060654"
/db_xref="GeneID:8454416"
/translation="MSKEKKRREALIYHAKPTPGKIKIVPTKPYATQRDLALAYSPGV
AEPCLEIHKDVEQVYKYTAKGNIVAVISNGTAVLGLGDIGPEASKPVMEGKSLLFKIF
ADIDGIDIELDTKDVDKFVETVKIMAPTFGGINLEDIKAPEAFEIERRLKEELNIPVM
HDDQHGTAIISAAALLNALDLAEKKIEDVRIVISGAGAAAISCSRLYRSLGASRENMV
MLDSKGVIRSDRPELSAEKKEFATDRKIDTLEEAVRDSDVFIGLSIADILTPAMLKTM
NKNAIVFAMANPNPEIDYNLAMKTRKDIIMATGRSDHPNQVNNVLGFPFIFRGALDVR
ATKINEEMKMAAVKALADLAKQPVPEQVNIAYGETRLTFGREYIIPKPFDPRLIAEVP
PAVARAAMESGVARAPIADWGRYREELLQRSGDDKKVIRWLMSRAKSMPKKIVFAEAD
QLDVLKAAQIAHDEGIAHPILLGNRKVIEELKEELEFDAEIPIIDQYEEDSLEKREAY
ARSYWELRQRKGSTLYNSRSKMRERNYFGAMMVREGDADGMISGYSRSYSSVVKPIFE
VIGRASEVSRAATVHVMITSRGPIFLADTSLNIDPTAEELAEITRMTANLARAFNFEP
NIALLSYANFGSSEHPRAVKVREAIRILHEQEPDLVVDGEIQTDFALNRKLRQSQFPF
SKLAGKNVNTLVFPNLESANITYKLIKELQATDTIGPIMLGLRRAVHILQMGASVEEI
VNMTAVAVIDAQEREKRRRAKRKK"
misc_feature complement(76297..78543)
/locus_tag="RB2501_03625"
/note="bifunctional malic enzyme
oxidoreductase/phosphotransacetylase; Reviewed; Region:
PRK07232"
/db_xref="CDD:180898"
misc_feature complement(78097..78498)
/locus_tag="RB2501_03625"
/note="Malic enzyme, N-terminal domain; Region: malic;
pfam00390"
/db_xref="CDD:201200"
misc_feature complement(77356..78063)
/locus_tag="RB2501_03625"
/note="NAD(P) binding domain of malic enzyme (ME),
subgroup 2; Region: NAD_bind_2_malic_enz; cd05311"
/db_xref="CDD:133453"
misc_feature complement(order(77596..77598,77602..77604,77626..77628,
77692..77700,77752..77754,77764..77769,77887..77892,
77956..77967))
/locus_tag="RB2501_03625"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:133453"
misc_feature complement(76309..77271)
/locus_tag="RB2501_03625"
/note="Phosphate acetyl/butaryl transferase; Region:
PTA_PTB; pfam01515"
/db_xref="CDD:201836"
gene 78656..78721
/locus_tag="RB2501_03630"
/db_xref="GeneID:8454417"
CDS 78656..78721
/locus_tag="RB2501_03630"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193735.1"
/db_xref="GI:260060655"
/db_xref="GeneID:8454417"
/translation="MGRFSLPETDGFLRDTGVFWF"
gene complement(78771..80099)
/locus_tag="RB2501_03635"
/db_xref="GeneID:8454418"
CDS complement(78771..80099)
/locus_tag="RB2501_03635"
/codon_start=1
/transl_table=11
/product="sugar transporter"
/protein_id="YP_003193736.1"
/db_xref="GI:260060656"
/db_xref="GeneID:8454418"
/translation="MSLPKPQLSFWQIFNMNVGFLGIQYSFGLQQSAINPIFLFLGAS
EELLPILNIAGPVTGLIVQPIIGAISDKTWSPRWGRRKPFFLIGALIGSICLFLFPLS
PALWFAVGLLWLLDVGNNMAMEPYRAFVGDKLPDKQMSLGYQMQSLFVGAGILLANAS
IFLFQDWFGGGEELTGSVPKWLYYSFFIGSFLSLATILWSVLKTPEIPPDAKELAEIN
RHKALPFAQRLKVPFVEIAEAVRDMPKFMWKLAGVYLFQWYALFVYWQFITPLFRTTM
GFDTSQAAAQAAKMSTTYNIVTALVALVLVPLTMRFGGKKVYALSLFGTAVALFWIPF
IDDPVNVLFPMILFGIGWAAMMGIPYSMVSKIVPQDRRGVYMGILNMMIVIPMGIETL
SFGAIFSNFLGSDSVNAMLFAGAFFAIAGLLALRLNVAKARAEVAEVMGE"
misc_feature complement(78897..80048)
/locus_tag="RB2501_03635"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(78939..78941,78948..78953,78960..78965,
78972..78977,79008..79010,79017..79022,79032..79034,
79041..79046,79053..79055,79194..79196,79206..79208,
79215..79217,79227..79229,79251..79253,79293..79295,
79302..79307,79314..79319,79326..79328,79638..79640,
79656..79661,79668..79673,79707..79709,79716..79721,
79728..79733,79740..79745,79899..79904,79908..79913,
79923..79925,79932..79937,79944..79946,79995..80000,
80004..80012,80019..80021))
/locus_tag="RB2501_03635"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature complement(78933..79979)
/locus_tag="RB2501_03635"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
gene complement(80214..81170)
/locus_tag="RB2501_03640"
/db_xref="GeneID:8454419"
CDS complement(80214..81170)
/locus_tag="RB2501_03640"
/codon_start=1
/transl_table=11
/product="iron-sulfur cluster-binding protein"
/protein_id="YP_003193737.1"
/db_xref="GI:260060657"
/db_xref="GeneID:8454419"
/translation="MGADAHAKLIKAEAKRLGFLSCGISRAGFLEEEAPRLERWLKAG
MHGEMGWMENHFDKRLDPTLLVPGAKSVVSLLLNYYPAEQQPESTYQVSKYAYGEDYH
RVIKDRLRELLHVIRTEIGEVEGRAFVDSAPVLDKAWAARSGLGWMGKHSNLLTKEVG
SYYFIAELILDLELPPDAPVTDHCGTCTACIDACPTQAITEPYVVDGSKCISYYTIEL
KSEIPASASGQWADWIFGCDICQDVCPWNRFATPHSEPRFNAHPELMEMTRADWEELT
EEVFRQVFPKSAVKRTKFSGLKRNIAFLSDGDTASENDFERE"
misc_feature complement(80265..81083)
/locus_tag="RB2501_03640"
/note="iron-sulfur cluster binding protein, putative;
Region: TIGR00276"
/db_xref="CDD:161798"
misc_feature complement(80778..80996)
/locus_tag="RB2501_03640"
/note="Domain of unknown function (DUF1730); Region:
DUF1730; pfam08331"
/db_xref="CDD:149403"
gene complement(81219..81818)
/locus_tag="RB2501_03645"
/db_xref="GeneID:8454420"
CDS complement(81219..81818)
/locus_tag="RB2501_03645"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_003193738.1"
/db_xref="GI:260060658"
/db_xref="GeneID:8454420"
/translation="MKTKIHLCLSGLFLAALMGSSCKEQATQTTMATAGSPAETSETD
RLARGEYLVGVIGCADCHTPKKMTERGPVPDMDKYMMGYDASQAMPPVPESVPIGPWV
LFKGDLTAAVGPWGTTYAANLTPDDTGIGTWTLDQFGKAVREGKFKGLDGGRPIMPPM
PVEAYSKLSDADLEAIFTYLKSLKPVRNVVPAYMPPSGP"
gene complement(81859..82422)
/locus_tag="RB2501_03650"
/db_xref="GeneID:8454421"
CDS complement(81859..82422)
/locus_tag="RB2501_03650"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193739.1"
/db_xref="GI:260060659"
/db_xref="GeneID:8454421"
/translation="MLRQTSLPGLLAAAVFLLLASGCSKPETGEDATLSAVSAKTKVE
TLDSQLKQARKAAMRFHSFQQAVKHGYADPYPFNPSPYVPNMGFHYINVGLMDGTFEV
DRPEILLYVPNKQGKLKLVGIEYAIPAAPDSEAPEGFIGDEDHWHYNPEVAGGAWTLH
AWVVMDNPDGVFASFNPDVPVSDPSLD"
gene complement(82639..85548)
/locus_tag="RB2501_03655"
/db_xref="GeneID:8454422"
CDS complement(82639..85548)
/locus_tag="RB2501_03655"
/codon_start=1
/transl_table=11
/product="two-component system sensor histidine
kinase/response regulator"
/protein_id="YP_003193740.1"
/db_xref="GI:260060660"
/db_xref="GeneID:8454422"
/translation="MPTNRFFLLIFLVWALGLQAQAPYELNPKYPVHSLDGVLSVWKD
STEVLSPEILLEAPPMGAEQGDALPQYLDVRWPYWGKLTLLATDTLPGWRLHFEDKMI
GPPAWTKSNGKVDVWAYARGELLFHKRSGVEYPKTVRDRAPHWVLNSVGLDGIPSGVP
VTLVIRVEGNSIGYPPYFHLTARSPEQPFYHQIFQFNTSFNVFMFGAALIIFIYHLLQ
FLYMRERVILWFVLWLGFCTLTQAMTVGLLIGDISRFRLPVQIAISNGVFYTFWFFGR
AYVGSRQKFPVLDRFIKGLALLTLAEIITVVAYVIVFDPQAYFTAVGWHYPFLLVYTL
GSLGLAIALVLKRDAFARYFGIGTLVGGLGLLVGIFWSMGLINLRFLGVDPYATGIFL
QLLIYSLGIAYRRQTLAKQAAEERVRAAVSESEVRRISDLNALKSRFFTNISHEFRTP
LTLIRGPIQAALDRSGKEGGSEVRLPARDLDMVRRNTERLEGLVDELLELSRIESGKA
EILLTHGDVEQVLKSVVFAFESLAERSNIALRVDLGDAGAAQAAEMGQDSSEVAAWYD
RNKLEKIVYNLLSNAFKYTPEGGIVSFRSRLESGRLLMEISDTGKGIPAADLGQIFER
FYRVEGDEAHGTGIGLALCKELVELQGGELSVESMPGKGTSFRVGLPARREDFPKPNR
LEHVAASGMPAARPTAVKPKEAGEPGIGEQLPDAPSRPCILLVEDNADLRRFVGEVLQ
EKYRVLYAEDGFQGERMAIEHIPDVVVSDVMMPRKDGYELCHALKTNTKTSHIPIILL
TARAGQENKMEGLFQGAEAYLTKPFEARELLVRIRNLMGRQKALWEKMQHSSLVLSGE
LDLPSLDDAFLKKVGSAIESHLDSAELSVEFLAQQVGFSRAQLHRKLKALTGKSPNQL
INEVRLEKARLLLQSRSATVSEVAYSVGFSNLSYFTKRFRERYGMTPSAFIADTE"
misc_feature complement(84337..84942)
/locus_tag="RB2501_03655"
/note="7TM diverse intracellular signalling; Region:
7TMR-DISM_7TM; pfam07695"
/db_xref="CDD:203729"
misc_feature complement(84043..84252)
/locus_tag="RB2501_03655"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(84058..84060,84070..84072,84079..84081,
84091..84093,84100..84102,84112..84114,84178..84180,
84187..84189,84199..84201,84208..84210,84220..84222,
84232..84234))
/locus_tag="RB2501_03655"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(84214..84216)
/locus_tag="RB2501_03655"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(83545..83841)
/locus_tag="RB2501_03655"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(83551..83553,83557..83562,83575..83577,
83581..83583,83629..83640,83710..83715,83719..83721,
83725..83727,83731..83733,83800..83802,83809..83811,
83821..83823))
/locus_tag="RB2501_03655"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(83809..83811)
/locus_tag="RB2501_03655"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(83632..83634,83638..83640,83713..83715,
83719..83721))
/locus_tag="RB2501_03655"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature complement(83050..83385)
/locus_tag="RB2501_03655"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(83041..83382)
/locus_tag="RB2501_03655"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(83083..83088,83095..83097,83152..83154,
83218..83220,83242..83244,83368..83373))
/locus_tag="RB2501_03655"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(83242..83244)
/locus_tag="RB2501_03655"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(83218..83226,83230..83235))
/locus_tag="RB2501_03655"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(83080..83088)
/locus_tag="RB2501_03655"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(82801..82929)
/locus_tag="RB2501_03655"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature complement(82657..82905)
/locus_tag="RB2501_03655"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature complement(82654..82764)
/locus_tag="RB2501_03655"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene complement(85635..86657)
/gene="ruvB"
/locus_tag="RB2501_03660"
/db_xref="GeneID:8454423"
CDS complement(85635..86657)
/gene="ruvB"
/locus_tag="RB2501_03660"
/note="promotes strand exchange during homologous
recombination; RuvAB complex promotes branch migration;
RuvABC complex scans the DNA during branch migration and
resolves Holliday junctions at consensus sequences; forms
hexameric rings around opposite DNA arms; requires ATP for
branch migration and orientation of RuvAB complex
determines direction of migration"
/codon_start=1
/transl_table=11
/product="Holliday junction DNA helicase RuvB"
/protein_id="YP_003193741.1"
/db_xref="GI:260060661"
/db_xref="GeneID:8454423"
/translation="MNEHLDPTADGLSPEELDIERALRPVSFDDFTGQAQVLENLTVF
VQAANLRQEALDHTLLHGPPGLGKTTLAHILANELGVGLKVTSGPVLDKPGDLAGLLT
NLEPRDVLFIDEIHRLSPVVEEYLYSAMEDFKIDIMIETGPNARSVQLHLNPFTLVGA
TTRSGLLTAPMRARFGISSRLEYYNTELLATIVQRSAEILKVPITEDAAIEIAGRSRG
TPRICNALLRRVRDFAQIKGNGNIDMEISRFGLKALHVDAYGLDEMDNKILATIIDKF
KGGPVGLTTLATAVSENAETIEEVYEPFLIQQGFIMRTPRGREVTELAYQHLGRIKGG
GQPGLF"
misc_feature complement(85668..86636)
/gene="ruvB"
/locus_tag="RB2501_03660"
/note="Holliday junction DNA helicase RuvB; Reviewed;
Region: ruvB; PRK00080"
/db_xref="CDD:178847"
misc_feature complement(86109..86561)
/gene="ruvB"
/locus_tag="RB2501_03660"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(86451..86474)
/gene="ruvB"
/locus_tag="RB2501_03660"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(86172..86174,86319..86321,86448..86471))
/gene="ruvB"
/locus_tag="RB2501_03660"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(86316..86333)
/gene="ruvB"
/locus_tag="RB2501_03660"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(86136..86138)
/gene="ruvB"
/locus_tag="RB2501_03660"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature complement(85668..85889)
/gene="ruvB"
/locus_tag="RB2501_03660"
/note="Holliday junction DNA helicase ruvB C-terminus;
Region: RuvB_C; pfam05491"
/db_xref="CDD:203257"
gene complement(86654..86854)
/locus_tag="RB2501_03665"
/db_xref="GeneID:8454424"
CDS complement(86654..86854)
/locus_tag="RB2501_03665"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193742.1"
/db_xref="GI:260060662"
/db_xref="GeneID:8454424"
/translation="MFVYPRGSDVAFGLPPEGPDRAGKNITLQSSRIFPVENMIIINE
IKRIGPLGHRGMWPVLLSLSVI"
gene 86880..88460
/locus_tag="RB2501_03670"
/db_xref="GeneID:8454425"
CDS 86880..88460
/locus_tag="RB2501_03670"
/note="PEP carboxykinase; PEP carboxylase; PEPCK;
catalyzes the phosphorylation and decarboxylation of
oxaloacetate to form phosphoenolpyruvate using ATP"
/codon_start=1
/transl_table=11
/product="phosphoenolpyruvate carboxykinase"
/protein_id="YP_003193743.1"
/db_xref="GI:260060663"
/db_xref="GeneID:8454425"
/translation="MAAFDLSKYGITVTDIHRNTSVPVLYEIGLRNEPGTAISDVGAL
LVYSGEKTGRSPKDKRIVRHPESEKHIDWGDINIGLDEHTYMVNHERAIDYLNICKRL
FVVDAFAGWDPDYRLKVRIICTRAYHALFMQNMLIMPTAKELEDFGEPDYVVFNGGGF
PANIYTSEMTSKTSVDVHLERREIVILGTQYAGEMKKGIFGVMNYLMPLRDVLPMHCS
ANVGHDGDVTILFGLSGTGKTTLSADPKRKLIGDDEHCWTDSGTFNIEGGCYAKAIDL
SEESEPDIFNAIRFGTVLENVVYDEKTRKVDYTDTSITQNTRASYPIEHIENVQIPCV
AGHPKNIIFLTCDAFGVLPPVSKLTPEQASYHFISGYTAKVAGTEMGVTEPEATFSAC
FGAAFMMWHPNRYAELLAEKIRKHEVTAWLVNTGWTGGAYGEGSRIKLKYTRAMLDAI
HNGDFERVSYKEDPAFGLQIPESCPDVPAEVLLPRSTWKDPKAYDATMSKLVTLFREN
FKRFESGVNPEIVAAGPQ"
misc_feature 86913..88322
/locus_tag="RB2501_03670"
/note="Phosphoenolpyruvate carboxykinase; Region:
PEPCK_ATP; pfam01293"
/db_xref="CDD:201716"
misc_feature 86919..88451
/locus_tag="RB2501_03670"
/note="Phosphoenolpyruvate carboxykinase (PEPCK), a
critical gluconeogenic enzyme, catalyzes the first
committed step in the diversion of tricarboxylic acid
cycle intermediates toward gluconeogenesis. It catalyzes
the reversible decarboxylation and...; Region: PEPCK_ATP;
cd00484"
/db_xref="CDD:29830"
misc_feature order(87039..87041,87450..87452,87456..87458,87465..87470,
87525..87527,87579..87599,87633..87638,87687..87689,
87693..87695,87720..87722,87831..87833,88188..88190,
88197..88199,88206..88208)
/locus_tag="RB2501_03670"
/note="active site"
/db_xref="CDD:29830"
misc_feature order(87039..87041,87450..87452,87456..87458,87465..87470,
87687..87689,87831..87833)
/locus_tag="RB2501_03670"
/note="substrate-binding site [chemical binding]; other
site"
/db_xref="CDD:29830"
misc_feature order(87468..87470,87525..87527,87594..87596,87633..87638,
87687..87689)
/locus_tag="RB2501_03670"
/note="metal-binding site [ion binding]"
/db_xref="CDD:29830"
misc_feature order(87579..87599,87720..87722,88188..88190,88206..88208)
/locus_tag="RB2501_03670"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29830"
gene 88585..90867
/locus_tag="RB2501_03675"
/db_xref="GeneID:8454426"
CDS 88585..90867
/locus_tag="RB2501_03675"
/codon_start=1
/transl_table=11
/product="acyl-coenzyme A oxidase I"
/protein_id="YP_003193744.1"
/db_xref="GI:260060664"
/db_xref="GeneID:8454426"
/translation="MQTYSYSQGIYPYLPVFYVIWSDDLLSASEIAVVKKAIAADPGL
SHEERNRLLGWLDRDSPPDAEEFRHWNHLIVRSGVTYREDADYPLSEFAAAFAESQAP
GGSPHPVLRDIEVNLGIQPNHYRHLFGQNAVPVAVASEFQGEVLAEMGLRPHYPDYLT
CREFLQAPVFEQHLERDKEAHRQRVLQQLKRLAAEGYGALAYPPEYGGKNDMPAYATL
FENLMFIDGSLCVKFGVQFGLFGGSIQKLGTKRHWEAYLKDAGTAKLLGCFAMTETRH
GSNVRGIRTTATYVKESDELVVHTPGPDDNKEYIGNALHAQMATVFAQLIVDGENQGV
HAVLVPMRDGSGELLPGIRVEDNGYKMGLNGVDNGKIWFNQVRVPRGNLLDRYGSITE
SGSYHSDIKNPNKRFFTMLGTLVGGRICVARGALAGARFGLSIAVRYALRRRQFNDAA
RVQEDLIMDYPSHQVRLLPAVASSYVYQAALTRLLKSYDGADGTDTRQLEAGVAGLKA
LVTEFADRTLQECREACGGKGYLLENRIGQLKNDVDIFTTFEGDNTVLLQLAAKSRLT
DFRAEFNSDDFFGVLRLLGTQIGKRLSAINPAYTNKTDREHLYNPAFHLHALTYRTDR
LTYTLALRIRDYIKKGVPAYQAFLKVQTHLLALGRAYAALLAFELFLEHTEDLSDDPH
ADLIRKLGTLHALSEIRADAAWYLEQGYIGKRKSKAIRSRVERLCTELRPHARALVDG
FGIPPTRLSEVPIADQSGSL"
misc_feature 89002..90861
/locus_tag="RB2501_03675"
/note="acyl-coenzyme A oxidase; Region: PLN02636"
/db_xref="CDD:178243"
misc_feature 89068..90864
/locus_tag="RB2501_03675"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:209100"
misc_feature order(89299..89301,89389..89391,89395..89397,89509..89511,
89515..89517,90226..90234,90238..90240,90244..90246)
/locus_tag="RB2501_03675"
/note="active site"
/db_xref="CDD:173838"
gene complement(90849..91673)
/locus_tag="RB2501_03680"
/db_xref="GeneID:8454427"
CDS complement(90849..91673)
/locus_tag="RB2501_03680"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193745.1"
/db_xref="GI:260060665"
/db_xref="GeneID:8454427"
/translation="MRALALVLALLVGAGAWAQRKPRIKGNRNPVKISESLPPFKYLR
LEDDLEVRIRQQGSDGYELRVDDNLVDVLQFQVQDSTLVISSFYDITGSRALDITVFF
RELSGVEVLAGKLIGEAEFNADLFSIRTEGAAGAELRLRASLCDVTLAGNSRADLNIR
AESLVVRMAERSDATIYTDSDTISAELGDNADLTLEGIGDHAVLRLSGESGLSARKLV
AGILEANLSGATTARIHAGTSLILDASGQSRTYLYGEPAVTLRRFADRAELHKEPD"
misc_feature complement(90906..91559)
/locus_tag="RB2501_03680"
/note="Protein of unknown function (DUF2807); Region:
DUF2807; pfam10988"
/db_xref="CDD:192686"
gene complement(91864..93582)
/locus_tag="RB2501_03685"
/db_xref="GeneID:8454428"
CDS complement(91864..93582)
/locus_tag="RB2501_03685"
/codon_start=1
/transl_table=11
/product="Cytochrome-c oxidase"
/protein_id="YP_003193746.1"
/db_xref="GI:260060666"
/db_xref="GeneID:8454428"
/translation="MISKQYLITGLIMGFIGIAMSLLFRMQLAWPGESFPVFEAVLGK
WAPEGVMDADIYLALVTIHGTIMVFFVLTAGLSGTFSNLLIPLQIGARDMASGFLNML
SYWMFFLSSVIMVISLFVEAGPAAAGWTIYPPLSALPMAQPGSGMGMTLWLVSMAIFI
ASSLLGSLNYIVTVINLRTKGMSMTRLPLTIWAFFVTAIIGVISFPVLLSAALLLLMD
RSFGTSFFLSDIFIQGEVLHYQGGSPVLFEHLFWFLGHPEVYIVILPAMGIVSEVMSV
NARKPIFGYRAMIASILAIAFLSTIVWGHHMFISGMNPFLGSVFTFTTLLIAIPSAVK
AFNWITTLWKGNLQLNPGMLFSIGMVSTFITGGLTGIILGDSTLDINVHDTYFVVAHF
HLVMGISALYGLFAGVYHWFPKMFQGRMMNKNLGYVHFWVTAVGSYGVFFPMHFVGMA
GVPRRYYENTAFPMFDELVDIQVLMTVFAIITAAAQLVFAFNFVRSIFYGKRGPQNPW
QATTLEWTAPQEHIHGNWPGAIPEVHRWPYDYSKTYENGEYILPGQDYVPQHIPLQDE
EEELQH"
misc_feature complement(91984..93579)
/locus_tag="RB2501_03685"
/note="Heme-copper oxidase subunit I. Heme-copper
oxidases are transmembrane protein complexes in the
respiratory chains of prokaryotes and mitochondria which
catalyze the reduction of O2 and simultaneously pump
protons across the membrane. The superfamily is...;
Region: Heme_Cu_Oxidase_I; cl00275"
/db_xref="CDD:206949"
misc_feature complement(92002..93579)
/locus_tag="RB2501_03685"
/note="cytochrome c oxidase subunit I; Validated; Region:
COX1; MTH00007"
/db_xref="CDD:133649"
misc_feature complement(order(93064..93066,93076..93078,93094..93099,
93274..93276,93283..93285,93304..93306,93337..93339,
93565..93567))
/locus_tag="RB2501_03685"
/note="D-pathway; other site"
/db_xref="CDD:29930"
misc_feature complement(order(92116..92118,92218..92223,92392..92397,
92404..92406,92425..92427,93196..93198,93367..93369,
93379..93384,93394..93396,93415..93417,93508..93510,
93520..93522))
/locus_tag="RB2501_03685"
/note="Low-spin heme binding site [chemical binding];
other site"
/db_xref="CDD:29930"
misc_feature complement(order(92221..92223,92431..92436,92446..92448,
92836..92841,92854..92856))
/locus_tag="RB2501_03685"
/note="Putative water exit pathway; other site"
/db_xref="CDD:29930"
misc_feature complement(order(92410..92412,92665..92670,92815..92817))
/locus_tag="RB2501_03685"
/note="Binuclear center (active site) [active]"
/db_xref="CDD:29930"
misc_feature complement(order(92581..92583,92590..92592,92665..92670,
92770..92772,92803..92805,92815..92817))
/locus_tag="RB2501_03685"
/note="K-pathway; other site"
/db_xref="CDD:29930"
misc_feature complement(order(92218..92223,92431..92436,92665..92667))
/locus_tag="RB2501_03685"
/note="Putative proton exit pathway; other site"
/db_xref="CDD:29930"
gene complement(93728..94735)
/locus_tag="RB2501_03690"
/db_xref="GeneID:8454429"
CDS complement(93728..94735)
/locus_tag="RB2501_03690"
/codon_start=1
/transl_table=11
/product="cytochrome c oxidase subunit II"
/protein_id="YP_003193747.1"
/db_xref="GI:260060667"
/db_xref="GeneID:8454429"
/translation="MTKIFEFSQLKAKTANSEVASDEDNKNNGYLMFGFLVFIYLLTI
FCFWKYSKFLLPEAASEHGGDYDQLMLWSFVIIFIVQFITQALLHYFAFKYRGEEGKK
ALFYADNDRLEFIWTIIPVIVLAGLIIWGLYTWTNIMDVNEEDDPLIVELYAQQFNWT
ARYGGADNVLGDANVRMIDIDRANVLGLDESDPNAADDIIVKELHLPVGRKVNFKMRS
QDVLHSAYMPHFRAQMNCVPGMITEFSFTPTITTAEMRQKPEVMEKVARTNAIRAERA
AAGEPNSDPWEFDFILLCNKICGKSHYNMQMKIIVESEEDYQAWIESQTTFGETVTAA
E"
misc_feature complement(93746..94642)
/locus_tag="RB2501_03690"
/note="Heme/copper-type cytochrome/quinol oxidases,
subunit 2 [Energy production and conversion]; Region:
CyoA; COG1622"
/db_xref="CDD:31809"
misc_feature complement(93794..94270)
/locus_tag="RB2501_03690"
/note="Cytochrome C oxidase subunit II, periplasmic
domain; Region: COX2; cl11412"
/db_xref="CDD:209309"
gene complement(94823..96172)
/locus_tag="RB2501_03695"
/db_xref="GeneID:8454430"
CDS complement(94823..96172)
/locus_tag="RB2501_03695"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193748.1"
/db_xref="GI:260060668"
/db_xref="GeneID:8454430"
/translation="MYTFSNRLKIGSVILMALGLMGMAIGFISAPSTVEEAKAMVAAS
HDDGHGGGHEAAAQTHETTSYDSTTEHGAAAQDADHSLDHDEHLLHQLQNRPWSAIYI
AAFFFFMLALGTLAFYAVQRAAQAGWSPLLFRVMEGITAYLVPGGIAIFVILVLSVLH
MNHLFVWMDAETVAHDELLQGKAGYLNPTFFLIRAAVFLGGWIAYREVSRRLSLAQDE
ANDNSNFIKNFRWSAGFLVFYLVTESIMSWDWIMSVDPHWFSTLFGWYVFASMFVSGI
TTIALVTIYLKSRGYLPDVNDSHIHDLGKFMFGISIFWTYLWFGQFMLIWYADIPEEV
TYFVTRIEDFKLPFFGMVAMNFLFPLLVLMNSDYKRINWFVVMTGIVVLLGHYLDVYL
MITPATVGDQWYIGVPEIGAVLFFGGAFIFWIFRAMTKAPLQPTRNPFIEESRQFHY"
gene complement(96186..96746)
/locus_tag="RB2501_03700"
/db_xref="GeneID:8454431"
CDS complement(96186..96746)
/locus_tag="RB2501_03700"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193749.1"
/db_xref="GI:260060669"
/db_xref="GeneID:8454431"
/translation="MKNTLYTALIFTGILILASCQDKREPNYQYMPNMYEPVGYEAYD
EVEWLPGGSMALLPAENTIARGALPYGLENTPEGKELSRALTSPLDSLNREENLAEGA
ALYALYCAICHGPKGDGQGNLVKREKILGVPSYADPGRNINVGTTYHVIYYGQNAMGS
YATQLDEKERWQVSEYVMKLKEDLTQ"
misc_feature complement(96213..96602)
/locus_tag="RB2501_03700"
/note="Cytochrome c, mono- and diheme variants [Energy
production and conversion]; Region: CccA; COG2010"
/db_xref="CDD:32193"
misc_feature complement(96216..96461)
/locus_tag="RB2501_03700"
/note="Cytochrome C oxidase, cbb3-type, subunit III;
Region: Cytochrome_CBB3; pfam13442"
/db_xref="CDD:205620"
gene complement(96756..97277)
/locus_tag="RB2501_03705"
/db_xref="GeneID:8454432"
CDS complement(96756..97277)
/locus_tag="RB2501_03705"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193750.1"
/db_xref="GI:260060670"
/db_xref="GeneID:8454432"
/translation="MASKVIQAYYDDDDVLMHAVKKVKAARHHIEEVYCPFPVHGLDK
AMGLAPTRIAITSFMYGCLGLTVAIVMMNYIMIQDWPQDIGGKPSFSYIENMPAFVPV
MFEMTVFFAAHLMVITFYLRSRLWPFKKAENPDPRSTDDHFIMEIELHGDEAALTDLL
RETGAVEINRVEK"
misc_feature complement(96762..97274)
/locus_tag="RB2501_03705"
/note="Protein of unknown function (DUF3341); Region:
DUF3341; pfam11821"
/db_xref="CDD:152257"
gene complement(97283..99025)
/locus_tag="RB2501_03710"
/db_xref="GeneID:8454433"
CDS complement(97283..99025)
/locus_tag="RB2501_03710"
/codon_start=1
/transl_table=11
/product="molybdopterin oxidoredutase membrane subunit"
/protein_id="YP_003193751.1"
/db_xref="GI:260060671"
/db_xref="GeneID:8454433"
/translation="MASHYEAPIRKPLVLGDKGYHDVSVDIAAPVEGRANKQWWIVFT
IALAAFLWGIGCIIYTISTGIGTWGLNRTVNWAWDITNFVWWVGIGHAGTLISAVLLL
FRQKWRMAINRSAEAMTIFSVVQAGLFPIIHMGRPWLAYWVVPIPNQFGSLWVNFNSP
LLWDVFAISTYLSVSLVFWWTGLLPDFAMIRDRAVKPFQKKIYSLVSFGWSGRAKDWQ
RFEEVSLVLAGLATPLVLSVHTIVSFDFATSVIPGWHTTIFPPYFVAGAIFSGFAMVQ
TLLIIMRKVCNLEAYITVQHIELMNIIIMITGSIVGCAYITELFIAWYSGVEYEQYAF
LNRATGPYWWAYTLMMTCNVVSPQVMWFKKIRTSILVSFIISIVVNIGMWFERFVIIV
TSLHRDYLPSSWTMFSPTFVDIGIFIGTIGFFFVLFLLYARTFPVIAQAEVKSILKSS
GERYKKLRDAGKPLYEIRTAVPRTADQVPPAAQATTPPPAGDDPAQVSSLLDAVGAFD
PVTQTPDNLKRIKGIGPQMEEKLNQIGIYTFAQVSRMTQREYDLLDSITGSFPGRAQR
DDWAGQAKLLNEKQ"
misc_feature complement(<98201..98866)
/locus_tag="RB2501_03710"
/note="Polysulphide reductase, NrfD; Region: NrfD;
cl01295"
/db_xref="CDD:212608"
misc_feature complement(97286..>97513)
/locus_tag="RB2501_03710"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG3743"
/db_xref="CDD:33538"
gene complement(99052..102183)
/locus_tag="RB2501_03715"
/db_xref="GeneID:8454434"
CDS complement(99052..102183)
/locus_tag="RB2501_03715"
/codon_start=1
/transl_table=11
/product="molybdopterin oxidoreductase, iron-sulfur
binding subunit"
/protein_id="YP_003193752.1"
/db_xref="GI:260060672"
/db_xref="GeneID:8454434"
/translation="MASNKKYWKSEAELSPDNSIVEKLKQNEFPEKLPEDAFLGDKEQ
LAGSQTSRRDFLKYVGFSTAAASLAACEGPVHKSIPYVMQPERIIPGVANYYATTIAD
GYDFASILVKTREGRPIKIENNKEAAVLGSSNARIQASVLSLYDSTRLQGPRSAEGDV
AWDGLDAAVRAKLGSLQGSGRQIALLTQTYASPSTEKLVAEFAEAYPETVHVTYDAIS
SDAALNAFEAKYGERALADYDLSKADLIISFGADFLGDWQGGGYDGGYAKGRIPKDGK
MSRHVQFESNMSLTGANADQRVPLTPAQQKVALAHLYAKLNGTSVSGDLPEAAVRALD
RAVSQIAKNRRRAVVLTGLDDVDAQSVALSINEMLGSEAFEPDAPRYVRQGNSAAVRQ
LIADMQAGRVGALIMDGVNPAYSLPASAGFAEAMQQVDLSVSFSTNWNETTELCTFTA
AANHYLESWGDAQFKKGHYSLMQPVIRELFDTRQFQQSLLVWMGSEQTWHDYIAQTWE
EGILAGGDWNQALHDGVYAPGGMGMADPETAAAIATDKETEAASPEGEVSSVVPIASS
LQRLAAATGGGMSLILYSKVGMGDGRQAGNPWLQEFPDPITRVSWDNYVTVSKADAAD
LGLVNEHVANGGLDGSYVNLTVNGATLQNVPVIIQPGQAPGTLGLSFGYGRQVGMKSE
MQTGVNAFALYENMDSVQEVAVEKAAGMHEFACIQLHNTLMGRGDIIKETTLEIFNTE
DPSHWNHVPQVSLNHQEVPATSVDLWDHFDRSVGHHFNMSIDLNACTGCGACVIACHA
ENNVPVVGKQEIRRSRDMHWLRIDRYYSSEDTFEGDNIKKDELSGAMESKAGFEEMED
PAANPQVAFQPVMCQHCNHAPCETVCPVAATAHSRQGHNHMAYNRCVGTRYCANNCPY
KVRRFNWFLYSDNEEFDYHMNNDLGKMVLNPDVNVRSRGVMEKCSWCIQMTQKSILDA
KREGRPVTDEEFQTACSNACSSGAIVFGDINDAESEVSKLAADDRMYHLLEHVGTRPN
VFYQVKVRNTNEA"
misc_feature complement(100579..102030)
/locus_tag="RB2501_03715"
/note="Molybdopterin-Binding (MopB) domain of the MopB
superfamily of proteins, a large, diverse, heterogeneous
superfamily of enzymes that, in general, bind
molybdopterin as a cofactor. The MopB domain is found in a
wide variety of molybdenum- and...; Region:
Molybdopterin-Binding; cl09928"
/db_xref="CDD:209095"
misc_feature complement(order(100810..100812,100825..100830,
100864..100866,100873..100881,100951..100959,
101134..101136,101269..101271,101329..101337,
101416..101421,101428..101430,101434..101439,
101545..101553,101557..101559,101776..101778))
/locus_tag="RB2501_03715"
/note="molybdopterin cofactor binding site; other site"
/db_xref="CDD:73198"
misc_feature complement(100027..100455)
/locus_tag="RB2501_03715"
/note="The MopB_CT_PHLH CD includes a group of related
uncharacterized putative hydrogenase-like homologs (PHLH)
of molybdopterin binding proteins. This CD is of the PHLH
region homologous to the conserved molybdopterin-binding
C-terminal (MopB_CT) region...; Region: MopB_CT_PHLH;
cd02784"
/db_xref="CDD:30316"
misc_feature complement(99079..99885)
/locus_tag="RB2501_03715"
/note="Fe-S-cluster-containing hydrogenase components 1
[Energy production and conversion]; Region: HybA; COG0437"
/db_xref="CDD:30786"
misc_feature complement(99790..99849)
/locus_tag="RB2501_03715"
/note="4Fe-4S binding domain; Region: Fer4_2; pfam12797"
/db_xref="CDD:205077"
gene complement(102217..103614)
/locus_tag="RB2501_03720"
/db_xref="GeneID:8454435"
CDS complement(102217..103614)
/locus_tag="RB2501_03720"
/codon_start=1
/transl_table=11
/product="Cytochrome c3"
/protein_id="YP_003193753.1"
/db_xref="GI:260060673"
/db_xref="GeneID:8454435"
/translation="MKKVPNRHPFPAIFGFCLVVSLLFSPTLSAQDDAAAQEPAAEAS
AAAGGEEGPCGPGDAANGKQLFNQNCAACHALDRRMTGPALANVAVRLTEEEGLDCEW
IYSWIRNSAGKIASGDAYANEIYAEYNQAAMTAFPTLSDQDIADILAYTEAPPPAPAT
AAAPAAGQAAGGGSGSGLSNDLVLGALLLVFGILVVMLVLVNKTLRRIAEASGVVLER
EKAQKGTPIWKAFAQNQFLVLVTVIFLMLGAAYFAYGWMMQVGVDQGYQPIQPIHYSH
KIHAGDNGIECKYCHSSARKSKHSGIPSLNVCMNCHKSIYEYTGNPEGPSAEDLAKGY
TNEFYTGEIKKLYAAVGWDEETQSYTGESQPVEWVRIHNLPDFVYFNHSQHVEVGQIQ
CQTCHGPVEEMEIMYQDAPLTMGWCINCHRETNVRMEGNDYYEKIHEELARKYGVEQV
TAAQMGGLECGKCHY"
misc_feature complement(103159..>103434)
/locus_tag="RB2501_03720"
/note="Cytochrome c, mono- and diheme variants [Energy
production and conversion]; Region: CccA; COG2010"
/db_xref="CDD:32193"
misc_feature complement(103165..103434)
/locus_tag="RB2501_03720"
/note="Cytochrome c; Region: Cytochrom_C; pfam00034"
/db_xref="CDD:200944"
misc_feature complement(<102805..>103071)
/locus_tag="RB2501_03720"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature complement(<102643..102807)
/locus_tag="RB2501_03720"
/note="Heme-binding domain of the class III cytochrome C
family and related proteins; Region: Cytochrom_C3;
cd08168"
/db_xref="CDD:173979"
misc_feature complement(order(102691..102693,102739..102747,
102754..102756,102778..102780,102787..102789))
/locus_tag="RB2501_03720"
/note="heme-binding residues [chemical binding]; other
site"
/db_xref="CDD:173979"
misc_feature complement(102223..102483)
/locus_tag="RB2501_03720"
/note="Heme-binding domain of the class III cytochrome C
family and related proteins; Region: Cytochrom_C3;
cd08168"
/db_xref="CDD:173979"
misc_feature complement(order(102223..102228,102235..102237,
102301..102303,102364..102366,102421..102429,
102436..102438,102460..102462,102469..102471))
/locus_tag="RB2501_03720"
/note="heme-binding residues [chemical binding]; other
site"
/db_xref="CDD:173979"
gene 103937..104305
/locus_tag="RB2501_03725"
/db_xref="GeneID:8454436"
CDS 103937..104305
/locus_tag="RB2501_03725"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-2"
/protein_id="YP_003193754.1"
/db_xref="GI:260060674"
/db_xref="GeneID:8454436"
/translation="MRNRFAPLLILLMSTAGLFAQSGRVTIEQDPEIGRLLEIYTKSN
SETDFYTIQVGFGSYSLAEELKDEVEQEFPQWTAKIVFDSPTYRVQVGRFRERLEAER
EFREVRKKFPGALLLRPGDR"
misc_feature 104081..104290
/locus_tag="RB2501_03725"
/note="Sporulation related domain; Region: SPOR;
pfam05036"
/db_xref="CDD:113793"
gene complement(104678..107314)
/gene="infB"
/locus_tag="RB2501_03730"
/db_xref="GeneID:8454437"
CDS complement(104678..107314)
/gene="infB"
/locus_tag="RB2501_03730"
/note="Protects formylmethionyl-tRNA from spontaneous
hydrolysis and promotes its binding to the 30S ribosomal
subunits during initiation of protein synthesis. Also
involved in the hydrolysis of GTP during the formation of
the 70S ribosomal complex"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-2"
/protein_id="YP_003193755.1"
/db_xref="GI:260060675"
/db_xref="GeneID:8454437"
/translation="MAENATIRLNKVLRELNISLDRAVDYLTSQGHEVEARPTTKISG
EVYQVLLDEFRSDKSKKVASKEVGEEKRKEKEALRQQLEQEQEEKRLARERRQSRSEV
VKAKADLAGPTQVGKIDLEETKKQGAPTKKEEPAVEKPAAETPGEAEKPAEAPAAKTQ
ADEKPEAEKPAAEKPEVMETEYKKLSGPKIKDKIDLTQFEKKKKEKKDDGDRKRRRRR
ITSKTDSGGRGKAGGRKQRFAANKVEPTEEEVQKQVRETLEKLQGKSKKGKGAKYRRD
KRDQHRQQTEKDLEAQELESKTLKVTEFVTVGEVATMMDVSTTDIISACMSLGIMVTM
NQRLDAETLTIVAEEFGYEVEFVTAEIEESIEEEEDAPEDLQPRAPIVTVMGHVDHGK
TSLLDYIREENVIAGESGGITQHIGAYGVSLENGQKIAFLDTPGHEAFTAMRARGAQV
TDIAIIVIAADDDIMPQTKEAISHAQAAGVPIVFAINKVDKPTANPDKIKEGLANMNL
LVEDWGGKIQSHDISAKTGQGVKELLEKVLLEAELLELKANPDKLASGTVVEAFLDKG
RGYVSTVLVTAGTLHIGDYVLAGTCSGKVKAMQDERGKNVKSAGPSTPISILGLDGAP
QAGDKFNVLEDEREAKQIASKRSQLLREQNVRTQRHITLDEIGRRIALGDFQELNIIL
KGDVDGSVEALSDSFQKLSTDEIQVNIIHKGVGAITESDVLLASASDAIIIGFNVRPM
GNAREVADKEEIDIRMYSIIYDAINDVKDAMEGMLSPEIKEEVTGTAEIRETFKISKI
GTIAGCMVTSGKVFRNSNIRLIRDGVVIFTGELASLKRFKDDVKEVSKGYDCGLQIKN
YNDIKEGDVVEAFQEVAVKKTL"
misc_feature complement(104681..106426)
/gene="infB"
/locus_tag="RB2501_03730"
/note="translation initiation factor IF-2; Region: IF-2;
TIGR00487"
/db_xref="CDD:161900"
misc_feature complement(106256..106411)
/gene="infB"
/locus_tag="RB2501_03730"
/note="Translation initiation factor IF-2, N-terminal
region; Region: IF2_N; pfam04760"
/db_xref="CDD:203084"
misc_feature complement(105728..106177)
/gene="infB"
/locus_tag="RB2501_03730"
/note="Initiation Factor 2 (IF2)/ eukaryotic Initiation
Factor 5B (eIF5B) family; Region: IF2_eIF5B; cd01887"
/db_xref="CDD:206674"
misc_feature complement(106136..106159)
/gene="infB"
/locus_tag="RB2501_03730"
/note="G1 box; other site"
/db_xref="CDD:206674"
misc_feature complement(order(105812..105814,105824..105826,
105929..105934,106001..106006,106061..106066,
106112..106117,106124..106126,106133..106138,
106148..106150,106154..106156))
/gene="infB"
/locus_tag="RB2501_03730"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206674"
misc_feature complement(order(105740..105748,105842..105847,
105851..105856,106001..106003,106133..106153))
/gene="infB"
/locus_tag="RB2501_03730"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206674"
misc_feature complement(106064..106084)
/gene="infB"
/locus_tag="RB2501_03730"
/note="Switch I region; other site"
/db_xref="CDD:206674"
misc_feature complement(106076..106078)
/gene="infB"
/locus_tag="RB2501_03730"
/note="G2 box; other site"
/db_xref="CDD:206674"
misc_feature complement(106007..106018)
/gene="infB"
/locus_tag="RB2501_03730"
/note="G3 box; other site"
/db_xref="CDD:206674"
misc_feature complement(105956..106012)
/gene="infB"
/locus_tag="RB2501_03730"
/note="Switch II region; other site"
/db_xref="CDD:206674"
misc_feature complement(105845..105856)
/gene="infB"
/locus_tag="RB2501_03730"
/note="G4 box; other site"
/db_xref="CDD:206674"
misc_feature complement(105740..105748)
/gene="infB"
/locus_tag="RB2501_03730"
/note="G5 box; other site"
/db_xref="CDD:206674"
misc_feature complement(105371..105655)
/gene="infB"
/locus_tag="RB2501_03730"
/note="This family represents the domain II of bacterial
Initiation Factor 2 (IF2) and its eukaryotic mitochondrial
homologue mtIF2. IF2, the largest initiation factor is an
essential GTP binding protein. In E. coli three natural
forms of IF2 exist in the cell; Region: IF2_mtIF2_II;
cd03702"
/db_xref="CDD:58093"
misc_feature complement(105008..105334)
/gene="infB"
/locus_tag="RB2501_03730"
/note="Translation-initiation factor 2; Region: IF-2;
pfam11987"
/db_xref="CDD:204802"
misc_feature complement(104711..104962)
/gene="infB"
/locus_tag="RB2501_03730"
/note="mtIF2_IVc: this family represents the C2 subdomain
of domain IV of mitochondrial translation initiation
factor 2 (mtIF2) which adopts a beta-barrel fold
displaying a high degree of structural similarity with
domain II of the translation elongation factor...; Region:
mtIF2_IVc; cd03692"
/db_xref="CDD:58083"
gene complement(107356..108588)
/gene="nusA"
/locus_tag="RB2501_03735"
/db_xref="GeneID:8454438"
CDS complement(107356..108588)
/gene="nusA"
/locus_tag="RB2501_03735"
/note="modifies transcription through interactions with
RNA polymerase affecting elongation, readthrough,
termination, and antitermination"
/codon_start=1
/transl_table=11
/product="transcription elongation factor NusA"
/protein_id="YP_003193756.1"
/db_xref="GI:260060676"
/db_xref="GeneID:8454438"
/translation="MENLALIESFSEFKDDKFIDRVTLMAILEEVFRAALKRKFGSDD
NFDIIINPDKGDLEIWRNRVVVPDGEVEEPNEEISLSEARKIEPDFEVGEDVSEEVKL
IDLGRRSILALRQNLIAKIHEHDNTTIYKQFKDLEGEIYTAEVHHIRHKAIILLDDEG
NELIMPKEKQIPSDFFRKGDNVRGIIESVELKGNKPLIIMSRTSPKFLEQLFHQEIPE
VFDGLITIKKAVRIPGEKAKVAVDSYDDRIDPVGACVGMKGSRIHGIVRELGNENIDV
INWTNNPQLMVTRSLSPARVTQVKLNDENMTAQVYLKPEEVSKAIGRGGHNIRLAGQL
TGYEIDVYREGVEEDVELTEFRDEIEEWIIMELRKIGLDTARAVLEQDVEDLVKRTDL
EEETILDVIRILKEEFED"
misc_feature complement(107557..108573)
/gene="nusA"
/locus_tag="RB2501_03735"
/note="transcription termination factor NusA; Region:
NusA; TIGR01953"
/db_xref="CDD:162623"
misc_feature complement(108220..108573)
/gene="nusA"
/locus_tag="RB2501_03735"
/note="NusA N-terminal domain; Region: NusA_N; pfam08529"
/db_xref="CDD:192057"
misc_feature complement(107983..108186)
/gene="nusA"
/locus_tag="RB2501_03735"
/note="S1_NusA: N-utilizing substance A protein (NusA),
S1-like RNA-binding domain. S1-like RNA-binding domains
are found in a wide variety of RNA-associated proteins.
NusA is a transcription elongation factor containing an
N-terminal catalytic domain and three...; Region: S1_NusA;
cd04455"
/db_xref="CDD:88421"
misc_feature complement(order(108091..108093,108097..108099,
108127..108129,108151..108153))
/gene="nusA"
/locus_tag="RB2501_03735"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88421"
misc_feature complement(order(107998..108000,108097..108099,
108103..108105,108133..108135,108145..108147))
/gene="nusA"
/locus_tag="RB2501_03735"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:88421"
misc_feature complement(107686..107892)
/gene="nusA"
/locus_tag="RB2501_03735"
/note="NusA-like KH domain; Region: KH_5; pfam13184"
/db_xref="CDD:205365"
misc_feature complement(107563..107730)
/gene="nusA"
/locus_tag="RB2501_03735"
/note="NusA_K homology RNA-binding domain (KH). NusA is an
essential multifunctional transcription elongation factor
that is universally conserved among prokaryotes and
archaea. NusA anti-termination function plays an important
role in the expression of...; Region: NusA_KH; cd02134"
/db_xref="CDD:48406"
misc_feature complement(107614..107625)
/gene="nusA"
/locus_tag="RB2501_03735"
/note="G-X-X-G motif; other site"
/db_xref="CDD:48406"
gene complement(108604..109077)
/locus_tag="RB2501_03740"
/db_xref="GeneID:8454439"
CDS complement(108604..109077)
/locus_tag="RB2501_03740"
/note="in Streptococcus pneumoniae this gene was found to
be essential; structure determination of the Streptococcus
protein shows that it is similar to a number of other
proteins"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193757.1"
/db_xref="GI:260060677"
/db_xref="GeneID:8454439"
/translation="MDSNRLEKRVSELLDEALAGRPELFLIDLKVNPDQSIQVTLDGD
EGISLQDCMDISRAVEHSLDRDEFNFSLEVGSAGATAPLLMPRQYRKHIGRKLAVRRA
GKEVQGTLTAADDKDITLSWKAREPKPVGKGKHTVRKEETIPHSEIEQAKVVLKF"
misc_feature complement(108613..109065)
/locus_tag="RB2501_03740"
/note="hypothetical protein; Validated; Region: PRK02001"
/db_xref="CDD:179358"
misc_feature complement(108607..109062)
/locus_tag="RB2501_03740"
/note="ribosome maturation protein RimP; Reviewed; Region:
PRK00092"
/db_xref="CDD:178857"
misc_feature complement(order(108622..108660,108715..108717,
108745..108747,108796..108798))
/locus_tag="RB2501_03740"
/note="heptamer interface [polypeptide binding]; other
site"
/db_xref="CDD:212462"
misc_feature complement(order(108715..108729,108736..108768,
108778..108789))
/locus_tag="RB2501_03740"
/note="Sm1 motif; other site"
/db_xref="CDD:212462"
misc_feature complement(order(108628..108660,108721..108723,
108727..108729,108739..108744,108760..108762,
108766..108768,108778..108780))
/locus_tag="RB2501_03740"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:212462"
misc_feature complement(order(108640..108642,108646..108648,
108727..108732))
/locus_tag="RB2501_03740"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:212462"
misc_feature complement(108625..108660)
/locus_tag="RB2501_03740"
/note="Sm2 motif; other site"
/db_xref="CDD:212462"
gene 109270..110652
/locus_tag="RB2501_03745"
/db_xref="GeneID:8454440"
CDS 109270..110652
/locus_tag="RB2501_03745"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193758.1"
/db_xref="GI:260060678"
/db_xref="GeneID:8454440"
/translation="MEIFTSYNLIIAASVVLILSFWFNGLAKRTSIPSVLMLIVLGVV
IQYGLKLFGASLPDLFGALEVLGIIGLIMIVLEAALELELRRDKVWPILKALFIALAG
LLASTWVAALILEALVPGMDTASAWLYATPLSILSSAIIIPSVGGLSPDKKEFHIYES
TFSDIAGIILFYFLAGQLNPAEAVGPAGFAGTILLTVVIALAASYGIILIFQGIKSQA
KQFLLIAVLLLLYAIGKKLHLSSLIIILVFGLVIANMKLFFAGPLRKHLNEERARQIY
HELHIITLETAFVVRTFFFVVFGLTIVLSSLLSIRVLLISLLVLASIYAIRFILLRPI
FGRDYTPQLFIAPRGLITVLLFYAIPPEAQVAGFDPGILLFIIIGTSLVMTWAMIRDK
QKPATLLDEIDEEYDLLDEAYDSEDALESDPSSDSAREDDAARGDHPAGSRPADGNGG
TGPKNPPPNH"
gene 110726..111316
/locus_tag="RB2501_03750"
/db_xref="GeneID:8454441"
CDS 110726..111316
/locus_tag="RB2501_03750"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193759.1"
/db_xref="GI:260060679"
/db_xref="GeneID:8454441"
/translation="MQQLMTPTRLCFALLLLLFLPLPGLAQPSVPAGGIPHAGATTGE
DAAVAESVAVTAVEIPEHIGAIVDSLALVNEIHGSYVGFSGATTRQYEHFIQLSQLAC
PEELLLFTSHENAVVRAYAFWALARQQYEGLEKVLLEHARDEALVREVQGGMVTTVPL
IDFMQWVVDPDLLDTESKKLDTDVFRQISEIRFSDR"
gene 111335..111916
/locus_tag="RB2501_03755"
/db_xref="GeneID:8454442"
CDS 111335..111916
/locus_tag="RB2501_03755"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193760.1"
/db_xref="GI:260060680"
/db_xref="GeneID:8454442"
/translation="MKSSFLKKHEAYLSEFVYGGMDGCVTTFAVVAGSVGASLDSAVI
IILGFANLIADGFAMSVGAYLSHNTARDNRLKLQATENPAAGQTPAGVPDPEPGKSAL
RIGGVTFASFLAIGLVPLLVYVVDYLYPLDVNHFLVACILTGIGFLFIGLLKAYVNRT
RMLRAVVEVLALGAAAAIVAYYVGDLLERLISG"
misc_feature 111368..>111577
/locus_tag="RB2501_03755"
/note="CCC1-related family of proteins; Region: CCC1_like;
cl00278"
/db_xref="CDD:206952"
gene complement(111956..112027)
/locus_tag="RB2501_t10170"
/db_xref="GeneID:8454443"
tRNA complement(111956..112027)
/locus_tag="RB2501_t10170"
/product="tRNA-Gln"
/codon_recognized="CAA"
/db_xref="GeneID:8454443"
gene 112222..115572
/locus_tag="RB2501_03760"
/db_xref="GeneID:8454444"
CDS 112222..115572
/locus_tag="RB2501_03760"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193761.1"
/db_xref="GI:260060681"
/db_xref="GeneID:8454444"
/translation="MFAKNFDKWDTLLGWFVFLVALVIYGITTEPTGSFWDAGEYIST
SAKLQVAHPPGAPFMQMMGAFFAMFAPGPENVAFLVNMMSGVSSAFALLFMFWTITNL
GRKLTGWNQSATDAKGMAILGAALVGCLSLAFSDSFWFNAVETEVYAMASLVMSLLFW
LGLKWTDNMDNPRGNRYLVLIAFVTGLTFGIQFMGFLAIPSIGLLYFFKRFGDAITPW
KFILANVAVVAVLMLVYKFSLTYVLVLFGWSEVFFINEVGLPFNSGTIIMGLLFAGAF
YYGLRYTRKNNYIKANTVVLCGLFMFIGFSSWLMLPIRANANVVINENNPADARALLA
YYNREQYPGVDSPIYGTYYSDRFAPAGENRDDEPKYEQNHELGKYEIVNYYKEALPGP
NPEHVGLLPRMWSDQHAENYMRYFGPLEFSLTENNAELRQAANQLRQGLASGEIDEGQ
YIGFLSRFGDYLKVHPPSFGQNLDYMVRFQFGYMYWRYFMWNFVGKQDDKQGRYNGNG
EWLSGIGFIDALRLGSQENLPQDKLDNKGRNTYYFLPLLLGIIGLVFQLSRNPRQFWV
LLVFFLFTGIAIQFYTNPYIFQPRERDYSLVGSFYVFAIWIGLGVLALFEEFKRWVKP
KIWAPAVTAICLLAVPLLMAAQNWDDHDRSGRYTAKSTAMAYLDSCQEDAGAMLFTIG
DNDTFPLWYVQEIEKYRTDVRIICTSLFATDWYVDQMKRKAYESDPIPSQLTHNLYRY
GNRDVIYHQQLTENRWDIKDFMNWIASDRPETKLRSYLQRIGADTSEYPESTLETVFY
PTNKIRVPVNKENVLASGLVKEKDSALIVDYIDIDLPGVLPKNRILMLDLLANNDWKR
PIYFSGGSFDQAEYLWMKEYLQLDGLAYKLVPIRTGNRNSFELGRIDTDLMYDVAMNW
YWGNSGSDDIYHDVQTRSQGLSFRSNLARLMEELIAENKIDKARDIIDLAMTHLPVEH
FEFYTFVEPFVDGYYKVGDTEKARELYYQLKGIYVDRIDYYAGIPLDEQYERAEEILS
DLEAYKRLNNILIDNNDRELAEKETLIFNEQIDRIAFMNRDNLLDQLPPADPGEMADP
DLIDTMPVSDTTMEDNVRTVVPADSISN"
misc_feature 112330..112875
/locus_tag="RB2501_03760"
/note="Protein of unknown function (DUF2723); Region:
DUF2723; pfam11028"
/db_xref="CDD:151475"
gene complement(115827..116123)
/locus_tag="RB2501_03765"
/db_xref="GeneID:8454445"
CDS complement(115827..116123)
/locus_tag="RB2501_03765"
/codon_start=1
/transl_table=11
/product="thioredoxin"
/protein_id="YP_003193762.1"
/db_xref="GI:260060682"
/db_xref="GeneID:8454445"
/translation="MSKFGELIDQNHPVLLDFYAEWNEQSTAMHPVLRDVAAALGDKG
KVIKIDVDKNKELSQALRIKGLPTLMIYKKGEMVWRQSGEQDANTLIGILNEYV"
misc_feature complement(115839..116114)
/locus_tag="RB2501_03765"
/note="TRX family; composed of two groups: Group I, which
includes proteins that exclusively encode a TRX domain;
and Group II, which are composed of fusion proteins of TRX
and additional domains. Group I TRX is a small ancient
protein that alter the redox...; Region: TRX_family;
cd02947"
/db_xref="CDD:48496"
misc_feature complement(order(116046..116048,116055..116057))
/locus_tag="RB2501_03765"
/note="catalytic residues [active]"
/db_xref="CDD:48496"
gene complement(116215..117444)
/locus_tag="RB2501_03770"
/db_xref="GeneID:8454446"
CDS complement(116215..117444)
/locus_tag="RB2501_03770"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193763.1"
/db_xref="GI:260060683"
/db_xref="GeneID:8454446"
/translation="MIRWLLFILVYLLICLYTLQALRSGTRLPWIHYLYIAITLLVLG
NFVYQFTWGEAEGRVLSRPKSYAFGFLLAVLTFNLITMIFLFSEDIFRVLVAGYHKVL
GGKGEFSLPGRRRFLSLLALGVASLPFGALLYGMYRGKYNFKVLKYELEFKDLPLAFH
GYRITQISDVHSGSFDNWPRISYGVDLINQQESDVIFFTGDLVNNKASEMDPWKDLFS
RLRAPDGVYSILGNHDYGDYVEWESEELKAQNLEDLKALQREMGFDLLLNEHRYLQRG
DDRIALVGVENWGRGGFKKAGDLRQATQGIRENDFKILLSHDPSHWEDKVIHDPMHFH
LTLSGHTHGMQFGIEIPGLVKWSPVKWRYRYWAGIYEELGQFINVNRGFGFLGYPGRV
GIWPEITVITLKKTGLT"
misc_feature complement(116233..117087)
/locus_tag="RB2501_03770"
/note="Predicted phosphohydrolases [General function
prediction only]; Region: COG1408"
/db_xref="CDD:31598"
misc_feature complement(116236..116964)
/locus_tag="RB2501_03770"
/note="Bacillus subtilis YkuE and related proteins,
C-terminal metallophosphatase domain; Region: MPP_YkuE_C;
cd07385"
/db_xref="CDD:163628"
misc_feature complement(order(116419..116421,116425..116427,
116494..116496,116746..116751,116842..116844,
116932..116934,116938..116940))
/locus_tag="RB2501_03770"
/note="putative active site [active]"
/db_xref="CDD:163628"
misc_feature complement(order(116419..116421,116425..116427,
116494..116496,116749..116751,116842..116844,
116932..116934,116938..116940))
/locus_tag="RB2501_03770"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:163628"
gene complement(117484..118224)
/locus_tag="RB2501_03775"
/db_xref="GeneID:8454447"
CDS complement(117484..118224)
/locus_tag="RB2501_03775"
/codon_start=1
/transl_table=11
/product="copper homeostasis protein"
/protein_id="YP_003193764.1"
/db_xref="GI:260060684"
/db_xref="GeneID:8454447"
/translation="MLVEVCANSVESARAAQDAGADRVEFCSELAVGGITPSRGLLEE
VRQAVSIPVHVLIRPRSGDFTYSHAEFRAMLSDIRHCVGMGFEGIVSGCLQPDGRVDV
ARTRELLGATGNARFTFHRAFDRSTDPHAALEALEELGVQTILSSGQALSAPEGLPLL
ESLQQRARRIRMMPGGGIHPGNIRLFAGKGFEAVHLSGIRKGPARETYPGPPMNAPGL
LRETKPLVSDPEVVKAVVDSLKAIADGG"
misc_feature complement(117628..118224)
/locus_tag="RB2501_03775"
/note="CutC family; Region: CutC; cl01218"
/db_xref="CDD:207343"
gene 118266..119267
/locus_tag="RB2501_03780"
/db_xref="GeneID:8454448"
CDS 118266..119267
/locus_tag="RB2501_03780"
/codon_start=1
/transl_table=11
/product="asparaginase"
/protein_id="YP_003193765.1"
/db_xref="GI:260060685"
/db_xref="GeneID:8454448"
/translation="MHRRKFLKNSSLGSAGLIGAATLAGCRDHPASHGEANLAGTPPA
PGPVALCTWDFGNATEKAWSVLNAGGNALDASEAGVRVEEANAGNQTVGLGGRPDRDG
FVTLDACIMDANGNCGSVMGLEGYVHPVSVARKVMEETPHVILIGEGAAQFARDQGFE
KRELLTEASRSDWEEWKETAEYQPIINIENHDTIGMLCMDWAGDICGACTTSGLAFKM
RGRVGDSPVIGAGLYVDNEVGGATATGLGEEVIRTVGSFLIVELMRQGMSPQQACEEG
VRRIMAKNRGRTDFQIGFIALNKQGQTGAYCIHPGFSYRLYNGEGHRNIPSETYLKS"
misc_feature 118407..119207
/locus_tag="RB2501_03780"
/note="Glycosylasparaginase catalyzes the hydrolysis of
the glycosylamide bond of asparagine-linked glycoproteins.
This enzyme is an amidase located inside lysosomes.
Mutation of this gene in humans causes a genetic disorder
known as aspartylglycosaminuria (AGU)...; Region:
Glycosylasparaginase; cd04513"
/db_xref="CDD:72875"
misc_feature order(118422..118424,118836..118844,118896..118898,
118926..118928,118995..118997)
/locus_tag="RB2501_03780"
/note="active site"
/db_xref="CDD:72875"
misc_feature order(118611..118616,118629..118631,118689..118703,
118707..118712,118719..118724,118920..118931,
118944..118952,118962..118964,119007..119009,
119016..119018,119034..119036,119046..119048,
119100..119102)
/locus_tag="RB2501_03780"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:72875"
misc_feature 118842..118844
/locus_tag="RB2501_03780"
/note="catalytic nucleophile [active]"
/db_xref="CDD:72875"
gene 119307..122135
/locus_tag="RB2501_03785"
/db_xref="GeneID:8454449"
CDS 119307..122135
/locus_tag="RB2501_03785"
/codon_start=1
/transl_table=11
/product="DNA polymerase I"
/protein_id="YP_003193766.1"
/db_xref="GI:260060686"
/db_xref="GeneID:8454449"
/translation="MSEKKRLFLLDAYALIFRGYYALIKNPRINSKGMDTSAIMGFMN
SLFDVIRREQPDHLAVCFDKDGSAERTELFPEYKANRDETPDAIRVAVPWIQDILKAM
HIPCIERSGLEADDIIGTLARQAEAQGYQVYMVTPDKDFGQLVTENTFMYRPARMGNG
IEIWGIPEVQKRFGVERPEQVIDYLGMMGDASDNIPGFPGVGDKTAKKFIDQFGSLEG
LLENTEQLKGKMKERIIENAELGKLSKKLATICVDCDVTFDEKDFELSMPDSQKVQEL
FEELEFRRLRDQFLKLFSGETESGPAVGTTETAKKQNREAGSGQFSLFEADAKGEQVE
AYSGRKTIKDVSHLYQAVGDGMERKLFLKSLMAQNRVCFDTETTSLDPLEAELVGIAF
SWEAHKGFYLPVPEGREAAGEVLEELRPFFESDTIEKVGQNLKYDIKVLSTYGIPVRG
PLFDTMLAHYLINPDMRHNMDVLAETYLNYTPVPISDLIGKKGKNQLSMRDVPLEDQT
EYAVEDADITLQLAQLFGPELREAQTEELFKEIEIPLLRVLADMELEGINLDTGFLEK
LSGELEKDIEGLVGKIYEAAGEEFNIGSPKQLGEILFDKMKLVDKPKKTRTGQYSTAE
DVLSGLAKEHEIVQMVLDYRGLTKLKSTYVDALPQQVAPSTGRVHTDYMQTVAATGRL
SSNNPNLQNIPIRTERGRQIRKAFIPRSPEYQLLAADYSQIELRIIAALSEEDTMIES
FKRGEDIHAATAAQVFQVPLEEVTREQRSNAKTVNFGIIYGVSAFGLSNQTNLSRTEA
KELIDTYYKTYPKLRNYISDQIDFAREHGYVQTVLGRRRYLKDINGSNAVVRGAAERN
AVNAPIQGSAADIIKIAMIRIYQKLREGNFKTRMLLQVHDELVFDCYRGEADTVSALI
KSEMESAYELAVPLVVDMGFGETWLEAH"
misc_feature 119316..122132
/locus_tag="RB2501_03785"
/note="DNA polymerase I; Provisional; Region: PRK05755"
/db_xref="CDD:180237"
misc_feature 119325..119819
/locus_tag="RB2501_03785"
/note="PIN domain of the 5'-3' exonuclease of Taq DNA
polymerase I and homologs; Region: PIN_53EXO; cd09859"
/db_xref="CDD:189029"
misc_feature order(119337..119339,119493..119495,119643..119645,
119649..119654,119718..119720,119724..119726)
/locus_tag="RB2501_03785"
/note="active site"
/db_xref="CDD:189029"
misc_feature order(119337..119339,119649..119651,119718..119720)
/locus_tag="RB2501_03785"
/note="metal binding site 1 [ion binding]; metal-binding
site"
/db_xref="CDD:189029"
misc_feature 119511..119549
/locus_tag="RB2501_03785"
/note="putative 5' ssDNA interaction site; other site"
/db_xref="CDD:189029"
misc_feature order(119643..119645,119652..119654)
/locus_tag="RB2501_03785"
/note="metal binding site 3; metal-binding site"
/db_xref="CDD:189029"
misc_feature order(119718..119720,119724..119726)
/locus_tag="RB2501_03785"
/note="metal binding site 2 [ion binding]; metal-binding
site"
/db_xref="CDD:189029"
misc_feature 119838..120056
/locus_tag="RB2501_03785"
/note="H3TH domain of the 5'-3' exonuclease of Taq DNA
polymerase I and homologs; Region: H3TH_53EXO; cd09898"
/db_xref="CDD:188618"
misc_feature order(119868..119891,119895..119924,119928..119939)
/locus_tag="RB2501_03785"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:188618"
misc_feature order(119874..119876,119883..119885)
/locus_tag="RB2501_03785"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:188618"
misc_feature 120399..120959
/locus_tag="RB2501_03785"
/note="DEDDy 3'-5' exonuclease domain of Escherichia coli
DNA polymerase I and similar bacterial family-A DNA
polymerases; Region: DNA_polA_I_Ecoli_like_exo; cd06139"
/db_xref="CDD:176651"
misc_feature order(120426..120437,120444..120446,120600..120605,
120609..120617,120711..120716,120759..120764,
120834..120836,120846..120848)
/locus_tag="RB2501_03785"
/note="active site"
/db_xref="CDD:176651"
misc_feature order(120426..120428,120432..120434,120615..120617,
120834..120836,120846..120848)
/locus_tag="RB2501_03785"
/note="catalytic site [active]"
/db_xref="CDD:176651"
misc_feature order(120429..120437,120444..120446,120600..120605,
120609..120614,120711..120716,120759..120764,
120834..120836,120846..120848)
/locus_tag="RB2501_03785"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176651"
misc_feature 120984..122123
/locus_tag="RB2501_03785"
/note="Polymerase I functions primarily to fill DNA gaps
that arise during DNA repair, recombination and
replication; Region: DNA_pol_A_pol_I_C; cd08637"
/db_xref="CDD:176474"
misc_feature order(121236..121238,121248..121250,121257..121262,
121335..121343,121347..121349,121353..121364,
121461..121466,121548..121550,121608..121610,
121620..121622,121872..121874,121893..121895,
121986..121994)
/locus_tag="RB2501_03785"
/note="active site"
/db_xref="CDD:176474"
misc_feature order(121236..121238,121248..121250,121257..121262,
121335..121343,121347..121349,121353..121364,
121644..121646,121869..121874,121881..121883,
121893..121895,121986..121994)
/locus_tag="RB2501_03785"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:176474"
misc_feature order(121461..121466,121470..121472,121548..121550,
121608..121610,121620..121622,121992..121994)
/locus_tag="RB2501_03785"
/note="catalytic site [active]"
/db_xref="CDD:176474"
gene complement(122153..124606)
/locus_tag="RB2501_03790"
/db_xref="GeneID:8454450"
CDS complement(122153..124606)
/locus_tag="RB2501_03790"
/codon_start=1
/transl_table=11
/product="TonB-dependent outer membrane receptor protein"
/protein_id="YP_003193767.1"
/db_xref="GI:260060687"
/db_xref="GeneID:8454450"
/translation="MAGMNKPAGHTCSQFRSHLGCILLLLFCLAPANAQQREATLSVQ
VLDAAGNAPLEGVQVAIRECRCGGITDRDGRYSRVLPQGSYSVEFFYLGFQGVQRQVD
LRESVDLVVRMQEQAEELSEVVLRARRIAENLESPQMGALELEMQEIKKIPMAAGEFD
VLRGMTLLPGVNNAGEISNGLSVRGGSLDQNLILYDYAPVFNPTHLFGLFSVFTPEVI
SQVDLYRANIPARFGGRTSSVLDVKTRNPFPSKFKLNGGVGLVSSRLAIETPLIKDKL
NLSLGGRAGFTDFLLPLFSERLDNTRARFHDATMKLLWLAGENDQVALTGFYSWDFYQ
LDLITRIQDINAANNQYKFRTLNGTLAWTHVLDDSSTLRNILVASDYQPENIFPEAES
DNEIRYNSSVRYLSLNSEYQRFVGEGLDWYAGLQAARYRIAPGSLDPGSGNSINPVEL
QSEHSYEFGAYANLNWSPLENLSLSAGLRLNHFVLVGPFSQPAFDPDTGNLIATTFFE
DGAGVKTYNGLEPRLGLNYSLGEFTSVKASYARLNQYLQNLYNTTTPLPTSRWKTSDP
LIGPQQSDAFGLGIYQGLADNEMEISLEGYYRASRNNLTYKAGADFFLEPYLQREVIQ
ADGKAYGVELSFRKPEGKVNGWLNYTYARSFLRSNGTGLRERINDNDWYPSEFDRPHV
FNSTVNFEGDLYNTWSFNFTLQSGRPYSAPNSVFRYQDIDIPIFLDRNNARLRPYHRL
DFSWTVRYGKKLDRRWVGDWTFTIYNVYGRRNPFNLFYSQRQGGEFGDIFLESPLGAY
ELSVLNSPLFAITYNFSFD"
misc_feature complement(124232..124489)
/locus_tag="RB2501_03790"
/note="Cna protein B-type domain; Region: Cna_B_2;
pfam13715"
/db_xref="CDD:205890"
misc_feature complement(122294..124105)
/locus_tag="RB2501_03790"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
misc_feature complement(122621..>123787)
/locus_tag="RB2501_03790"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
gene complement(124594..125745)
/locus_tag="RB2501_03795"
/db_xref="GeneID:8454451"
CDS complement(124594..125745)
/locus_tag="RB2501_03795"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193768.1"
/db_xref="GI:260060688"
/db_xref="GeneID:8454451"
/translation="MPTLFPRILGGIPVIFLLLWSLAGCTDPVDPEFSYREGLVYIDA
FASNDPGASYVQVFESGESFGRQTNEFLEGADVRFIRSPDGREVVLFESGDRYLPPAD
FAVRIGEQWQLRVELADGRRYFSTAESPVAPVPIREVSVSYDPQLVFAEDYDREVPGH
RLSVTFSDPAGEENYYFWQFRSYEQLVYCHICYNYSVYRDGECFTPDPDRPGPPLKEY
YTYSCEDACWQIRYNDRVEVYSDEFSDGTTTTGLPVADILLYQKRNVLVKLQQYTLGR
DAYRYYKTLKDLVDNNSGFNAPLPAALLGNLYNPDNPDEYVLGRFTAAAQVSRDVFIE
RIGLEEAQLEDRIVGQAEEYGSVPPPVTSSAPCLSGPYRTAVEPEGWPE"
misc_feature complement(124864..125706)
/locus_tag="RB2501_03795"
/note="Domain of unknown function (DUF4249); Region:
DUF4249; pfam14054"
/db_xref="CDD:206224"
gene complement(125847..128540)
/locus_tag="RB2501_03800"
/db_xref="GeneID:8454452"
CDS complement(125847..128540)
/locus_tag="RB2501_03800"
/codon_start=1
/transl_table=11
/product="membrane associated hydrolase"
/protein_id="YP_003193769.1"
/db_xref="GI:260060689"
/db_xref="GeneID:8454452"
/translation="MTRFSTALLCSLGVIALSRGQDTAEIPEPEPPASAVTADEVPRR
NYITAAIGAESVPVIDGTLDETVWNQVEWAGDFIEQRPDENTPPAQQTQFKILYDAKN
LYVGIRAFDTEPDKIVKRLSRRDGFDGDWVGIFIDSYHDKRTSFGFIVSAAGVKGDVF
GSNNGNNEDDTWNPIWYVKTRTDAAGWTAEMRIPMSQLKFSEAPEQVWGLQVMRRFFR
DEERSVWQRLPVDTPGFTSEFGLLTGLRNIESQNQLEIQPYTVARSETFDPQAGNPFE
DGSETGLTGGLDAKIGITNDLTLDLTINPDFGQVEADPSAIALDGFQIFFREQRPFFI
ENKNIFDYPVSPSQAGNTFGSDNVFYSRRIGRSPQGFPETAEGEFVDQPATTPILGAA
KFSGKTRDGWSVGLLESLTARRSAVIDNAGQRRREVVEPLTNYLVGRVQKDFNEGDTY
VGTIVTATNREALPETLEWLHEAAYTGGVDFKHQWNNRDWYLGGSLVWSHVSGSEAAI
LRTQESIAHLFQRVGADHVDVDPARTSLTGTGGNLQLGKVGNGHWRFESGATWRSPEL
ELNDIGFQRQADDIRHYTWVGYQTLKPDKTFRRVGINYNHWSAWDFAGNHNLVAFNTN
SWQNWAGNWFTNLGLTFRPLQYDNFALRGGPRLRQSASISFWNGINTDSRKKLRFNIF
QNGSQALDGSRDYYYVEGGFTYQPFNALRISAYPGFELNNDKLQYIDNLVSGGEPVYL
NGTIEQRTLSMSLRVNYTINPNLTLQYWGQPFISRGRYSEFKHISNPLAPQIAERITP
FGPGQITFEDGVYSVDRAQDGTVDFTFGDPDFSFIQFRSNLVLRWEYVPGSELFLVWS
QDLTASGDPAAALLGSLESNIFGETQPRNILLLKATYRFAL"
misc_feature complement(127848..128372)
/locus_tag="RB2501_03800"
/note="DOMON-like type 9 carbohydrate binding module;
Region: CBM9_like_2; cd09618"
/db_xref="CDD:187676"
misc_feature complement(order(127902..127904,128079..128081,
128085..128087,128142..128144))
/locus_tag="RB2501_03800"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:187676"
gene 128769..129224
/gene="rplM"
/locus_tag="RB2501_03805"
/db_xref="GeneID:8454453"
CDS 128769..129224
/gene="rplM"
/locus_tag="RB2501_03805"
/note="in Escherichia coli this protein is one of the
earliest assembly proteins in the large subunit"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L13"
/protein_id="YP_003193770.1"
/db_xref="GI:260060690"
/db_xref="GeneID:8454453"
/translation="MDTLSYKTKSANKSTVQKEWLLVDAEGQTLGRLASKVAKILRGK
YKPDFTPHVDCGDNVVVINAEKVSLSGNKWDAKEYIRYTGYPGGQRVQTARTLHEKNP
TALVEKAVKGMLPKNRLGADLFRNLRVYAGEQHDQEAQKPRAINLNDLR"
misc_feature 128826..129167
/gene="rplM"
/locus_tag="RB2501_03805"
/note="Ribosomal protein L13. Protein L13, a large
ribosomal subunit protein, is one of five proteins
required for an early folding intermediate of 23S rRNA in
the assembly of the large subunit. L13 is situated on the
bottom of the large subunit, near the...; Region:
Ribosomal_L13; cd00392"
/db_xref="CDD:88313"
misc_feature order(128853..128855,128859..128864,128871..128873,
128880..128882,128892..128894,128976..128978,
128982..128984,129066..129071,129087..129095,
129099..129107,129111..129119,129123..129125,
129129..129131,129141..129143,129150..129155)
/gene="rplM"
/locus_tag="RB2501_03805"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88313"
misc_feature 129069..129071
/gene="rplM"
/locus_tag="RB2501_03805"
/note="L3 interface [polypeptide binding]; other site"
/db_xref="CDD:88313"
gene 129224..129610
/gene="rpsI"
/locus_tag="RB2501_03810"
/db_xref="GeneID:8454454"
CDS 129224..129610
/gene="rpsI"
/locus_tag="RB2501_03810"
/note="forms a direct contact with the tRNA during
translation"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S9"
/protein_id="YP_003193771.1"
/db_xref="GI:260060691"
/db_xref="GeneID:8454454"
/translation="MEVIHKIGRRKTAVARVYVSQGNGSITVNKKDLAEYFPTATLQY
KVKQPFTLTENENNYDVSVNVFGGGITGQAEAVRLALSRALCEIDEEHRATLKPEGLL
TRDPRMVERKKYGQKKARKKFQFSKR"
misc_feature 129224..129607
/gene="rpsI"
/locus_tag="RB2501_03810"
/note="30S ribosomal protein S9; Reviewed; Region: rpsI;
PRK00132"
/db_xref="CDD:178888"
gene 129920..131089
/locus_tag="RB2501_03815"
/db_xref="GeneID:8454455"
CDS 129920..131089
/locus_tag="RB2501_03815"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S2"
/protein_id="YP_003193772.1"
/db_xref="GI:260060692"
/db_xref="GeneID:8454455"
/translation="MAPYIYMERNGIHVINLYKTVAKLDEAGEALKKIAASGRKILFV
ATKKQAKDIVAQKVAEVNMPYITERWPGGMLTNFVTIRRAVKKMASIDRMKKDGTFNT
LSKKERLQVDRLRAKLEKNLGSIADMTRLPGALFVVDTMREHIAVKEAQKLNIPIFAM
VDTNSDPRPIDFVIPANDDASKSIEVIMSQVTQFVADGLAERKSEKSAEKEGRDADTD
VVEKAPAVAKTDKAPAPAKQTKEIESEPVVEQEKPAEKQVKAENAAEPETVKSDSPVE
QPKAAEKEQKEEGKAPAKKEAAAEKATDSKAEDLTKIEGIGPKAAEALTKAGVSTYSA
LAGTKPDAIKEILTEASSRMAHLDPESWPKQAKLAADGKWEELAEWQEKAKGGVE"
misc_feature 129920..130486
/locus_tag="RB2501_03815"
/note="Ribosomal protein S2 (RPS2), involved in formation
of the translation initiation complex, where it might
contact the messenger RNA and several components of the
ribosome. It has been shown that in Escherichia coli RPS2
is essential for the binding of...; Region: RPS2; cd01425"
/db_xref="CDD:100106"
misc_feature order(129944..129952,130124..130126,130130..130138,
130145..130150,130364..130366,130373..130375)
/locus_tag="RB2501_03815"
/note="rRNA interaction site [nucleotide binding]; other
site"
/db_xref="CDD:100106"
misc_feature order(130370..130375,130379..130381,130421..130432)
/locus_tag="RB2501_03815"
/note="S8 interaction site; other site"
/db_xref="CDD:100106"
misc_feature 130475..130486
/locus_tag="RB2501_03815"
/note="putative laminin-1 binding site; other site"
/db_xref="CDD:100106"
gene 131162..131986
/locus_tag="RB2501_03820"
/db_xref="GeneID:8454456"
CDS 131162..131986
/locus_tag="RB2501_03820"
/codon_start=1
/transl_table=11
/product="elongation factor Ts"
/protein_id="YP_003193773.1"
/db_xref="GI:260060693"
/db_xref="GeneID:8454456"
/translation="MVKITASEVNKLRKSTGAGMMDCKNALVEAEGDFDKAIEILRKK
GQKVAAKRADRDSSEGAAIARVNDSNTEGVIVSLNCETDFVAKNDTFVSLAQKLAEIA
LGHASKEELLAADFEGISVQEKLIEQTGVIGEKIEIGDFRRLSAPFVGSYIHAGNKIA
TLVGLSAEVDGASEVAKDVAMQAAAMNPVALDESGVDQETIDKEIEIAKDQLREEGKP
EAMLDNIAKGKLKRFFKDNTLVNQAFIKDGKISVAEYVKSADKDLKVTGFERVALG"
misc_feature 131162..131983
/locus_tag="RB2501_03820"
/note="elongation factor Ts; Provisional; Region: tsf;
PRK09377"
/db_xref="CDD:181810"
misc_feature 131171..131284
/locus_tag="RB2501_03820"
/note="Ubiquitin Associated domain. The UBA domain is a
commonly occurring sequence motif in some members of the
ubiquitination pathway, UV excision repair proteins, and
certain protein kinases. Although its specific role is so
far unknown, it has been...; Region: UBA; cl00153"
/db_xref="CDD:206865"
misc_feature 131333..>131458
/locus_tag="RB2501_03820"
/note="Elongation factor TS; Region: EF_TS; pfam00889"
/db_xref="CDD:189759"
misc_feature 131606..131983
/locus_tag="RB2501_03820"
/note="Elongation factor TS; Region: EF_TS; pfam00889"
/db_xref="CDD:189759"
gene complement(132101..133969)
/locus_tag="RB2501_03825"
/db_xref="GeneID:8454457"
CDS complement(132101..133969)
/locus_tag="RB2501_03825"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193774.1"
/db_xref="GI:260060694"
/db_xref="GeneID:8454457"
/translation="MKIRFYHLMLSLLLVGCSATRNLPTAGETPIKASLDLVDVRDDR
VLVALDPGAFIAGEVKFYIPKTVPGTYSEDNYGRYVEGLAAFDYKGNPMPVVREDDNT
WSISGARELDRITYYVNDSYDSEATGDPAPFSPAGTNILAGEHYMLNLHGFVGYFEGL
REQPYTLELRIPEGLYPATSLSGSPGPDGTFTYSASRYFEVIDNPIQLSGEPPATFQV
GDITVNISVHSPNGAYSAAAIQPAMERMMQAQKAFLGDIDGTREYNILLYLSTLDNDA
RGFGALEHHTSTVVVLPEQLPAAQLEEAMVDVVSHEFFHIVTPLNVHSEEIQYFDYNA
PKMSRHLWMYEGTTEYFANLFQVRQELISEEDFYSRMVAKIRNASNYNDSLSFTEMSR
NVLEEPYEAEYANVYEKGALINMALDIRLRELSGGTYGVLSLMKELSAKYDEDTPFRD
EALFDEIVEMTYPEVRDFFQAHVIGNTPINYAAYLDKVGLDFGEQEVESGIFLKDMQS
QMPFIDVDPDNTDHIFLRSDIPLNTFFTGLGAQGGDVLKSINGTEVTLNAMRMLIGQS
FGWGPETEVRMVVERDGEEIVLEGTVGNPTVTELLILPDPEAPAEAVRLREAWLKG"
misc_feature complement(132110..133813)
/locus_tag="RB2501_03825"
/note="Predicted protease with the C-terminal PDZ domain
[General function prediction only]; Region: COG3975"
/db_xref="CDD:33755"
misc_feature complement(<132869..133051)
/locus_tag="RB2501_03825"
/note="Peptidase Gluzincin family (thermolysin-like
proteinases, TLPs) includes peptidases M1, M2, M3, M4,
M13, M32 and M36 (fungalysins); Region: GluZincin;
cl14813"
/db_xref="CDD:209905"
misc_feature complement(order(132935..132937,133025..133027,
133037..133039))
/locus_tag="RB2501_03825"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:189001"
misc_feature complement(132203..>132355)
/locus_tag="RB2501_03825"
/note="PDZ domain, also called DHR (Dlg homologous region)
or GLGF (after a conserved sequence motif). Many PDZ
domains bind C-terminal polypeptides, though binding to
internal (non-C-terminal) polypeptides and even to lipids
has been demonstrated; Region: PDZ; cl00117"
/db_xref="CDD:206846"
gene 134116..134823
/gene="pyrH"
/locus_tag="RB2501_03830"
/db_xref="GeneID:8454458"
CDS 134116..134823
/gene="pyrH"
/locus_tag="RB2501_03830"
/note="Catalyzes the phosphorylation of UMP to UDP"
/codon_start=1
/transl_table=11
/product="uridylate kinase"
/protein_id="YP_003193775.1"
/db_xref="GI:260060695"
/db_xref="GeneID:8454458"
/translation="MQYKRILLKLSGEALMGDRSYGIDPGRLALYAEEIRAVVEKGVE
VAIVIGGGNIFRGVAGASNGMDRVQGDHMGMLATIINGLALQSALEDKGLDTRLQSAI
KINEVAEPFIRRRAMRHLEKGRVVIFGGGTGNPYFTTDSAAVLRAIEIEADVILKGTR
VDGIYTSDPEKDKSATKFDSISFKDVLSRGLKVMDTTAFTLSQENELPIVVFDMNKQG
NLMKIVSGENIGTVVNL"
misc_feature 134125..134817
/gene="pyrH"
/locus_tag="RB2501_03830"
/note="UMP kinase (UMPK)-Ec, the microbial/chloroplast
uridine monophosphate kinase (uridylate kinase) enzyme
that catalyzes UMP phosphorylation and plays a key role in
pyrimidine nucleotide biosynthesis; regulation of this
process is via feed-back control and...; Region:
AAK_UMPK-PyrH-Ec; cd04254"
/db_xref="CDD:58620"
misc_feature order(134140..134142,134149..134154,134263..134271,
134530..134535,134590..134595,134602..134604,
134608..134610,134614..134619)
/gene="pyrH"
/locus_tag="RB2501_03830"
/note="putative nucleotide binding site [chemical
binding]; other site"
/db_xref="CDD:58620"
misc_feature order(134263..134271,134281..134286,134326..134328,
134335..134340,134509..134511,134515..134520,
134524..134532)
/gene="pyrH"
/locus_tag="RB2501_03830"
/note="uridine monophosphate binding site [chemical
binding]; other site"
/db_xref="CDD:58620"
misc_feature order(134302..134307,134329..134334,134353..134355,
134374..134376,134404..134406,134446..134448,
134458..134460,134467..134469,134485..134487,
134509..134511,134515..134523,134548..134550,
134557..134562,134728..134730)
/gene="pyrH"
/locus_tag="RB2501_03830"
/note="homohexameric interface [polypeptide binding];
other site"
/db_xref="CDD:58620"
gene 134845..135399
/gene="frr"
/locus_tag="RB2501_03835"
/db_xref="GeneID:8454459"
CDS 134845..135399
/gene="frr"
/locus_tag="RB2501_03835"
/note="Rrf; Frr; ribosome-recycling factor; release factor
4; RF4; recycles ribosomes upon translation termination
along with release factor RF-3 and elongation factor EF-G;
A GTPase-dependent process results in release of 50S from
70S; inhibited by release factor RF-1; essential for
viability; structurally similar to tRNAs"
/codon_start=1
/transl_table=11
/product="ribosome recycling factor"
/protein_id="YP_003193776.1"
/db_xref="GI:260060696"
/db_xref="GeneID:8454459"
/translation="MNEDIQFILDSAKENMDNAISHLEKELVKIRAGRASPSMLSSVM
VDYYGSQTPLNQMSNVNTPDARTISVQPWEKAMIPNIETAITNANLGFNPMNNGEMVI
INVPPLTEERRKQLVKQAKAEAEEAKVSIRAARQDANKEIKALDISEDLEQNAEIDIQ
ELTDTYTERVDGILEHKEAEIMKV"
misc_feature 134854..135396
/gene="frr"
/locus_tag="RB2501_03835"
/note="ribosome recycling factor; Reviewed; Region: frr;
PRK00083"
/db_xref="CDD:178850"
misc_feature 134866..135390
/gene="frr"
/locus_tag="RB2501_03835"
/note="Ribosome recycling factor (RRF). Ribosome recycling
factor dissociates the posttermination complex, composed
of the ribosome, deacylated tRNA, and mRNA, after
termination of translation. Thus ribosomes are 'recycled'
and ready for another round of...; Region: RRF; cd00520"
/db_xref="CDD:29621"
misc_feature order(134938..134949,135157..135168)
/gene="frr"
/locus_tag="RB2501_03835"
/note="hinge region; other site"
/db_xref="CDD:29621"
gene 135700..138099
/locus_tag="RB2501_03840"
/db_xref="GeneID:8454460"
CDS 135700..138099
/locus_tag="RB2501_03840"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193777.1"
/db_xref="GI:260060697"
/db_xref="GeneID:8454460"
/translation="MAFKLTQGFWARTARIILRNRILILVGIALVTVLLATQWKNMQF
SNTEANLLPDDHPATLEYGAFLEQFGEEGNTIVLAVKDSRLFEPEAFNRWNIFNEQLE
AFPEIDFVLSTDNLQRLVKDNEAQEFRLEPWLADSVRTTGQLDSLTDELFNRMPFYEK
LLYNKEGRTIQSVVYLDQDLVNTKVRKDFVLNDLRNLVAEFEQDTGMNVRVSGMPYIR
TMNSQNIIDEIGKFIFAALAVTSLIFFFFFRSIRATLISICVVIFGVMWAFGTLGLLQ
YEITVLTALIPPVIIVIGIPNCIFLINKYQQEVKKHGNQALSLQRVISKIGNATLMTN
VTTASGFATFIITDSRLLSEFGIVASINILGIFVLSLLIIPILYSFMPLPKTKHLKHL
NKRWIDAFVNWMERIVRHQRITVYIVAICTLVASIIGIYQIRISGSPIEDMPKKAEFF
QDIRFFEAEFDGIMPVEIVVDSRRRNGILKPATLRRMDQLGEVIRDIPELSRPISVVD
LVKYSKQAYYNGIPKYYQLPTSQENNFILDIARKSKDNGNLLQSFVDSTGQVARITTF
MQDMKTDRMEEIEQELREEAAKIFPEERYDVSLTGKALLFLKGTKFLVRNLVLSLALA
IGLISLLMAYLFRSFRMIVISLIPNLLPLVITAGVMGFLGVPIKPSTILVFSIAFGIS
VDDTIHFLAKYRQELISNHWRIRKSVYAALRETGVSMFYTSIVLFFGFSVFTISNFGG
TVALGALVSATLLFAMLANLILLPSLLLSLERNIANKQVLKKPQIDILPGGTGSGQDR
D"
misc_feature 135775..137940
/locus_tag="RB2501_03840"
/note="Predicted exporters of the RND superfamily [General
function prediction only]; Region: COG1033"
/db_xref="CDD:31236"
misc_feature <137593..137946
/locus_tag="RB2501_03840"
/note="Protein export membrane protein; Region: SecD_SecF;
cl14618"
/db_xref="CDD:199094"
gene 138196..139623
/gene="asnC"
/locus_tag="RB2501_03845"
/db_xref="GeneID:8454461"
CDS 138196..139623
/gene="asnC"
/locus_tag="RB2501_03845"
/note="catalyzes a two-step reaction, first charging an
asparagine molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="asparaginyl-tRNA synthetase"
/protein_id="YP_003193778.1"
/db_xref="GI:260060698"
/db_xref="GeneID:8454461"
/translation="MTRIRSILSEAPLLSEVSVSGWVRTFRSNRFIALNDGSTLENLQ
CVVDFENFDEATLRRINTGAALTVRGTLVESQGRGQKVEVQVSQLEIHGDADPESYPI
QPKKHSMEFLREQAHLRIRTNTFAAVMRVRSALAFGVHEYFTRNGFYYFHAPIITGSD
AEGAGEMFRVSTLDPLTPPRDESGNVDFGEDFFGKETNLTVSGQLEAEAYAMALGKVY
TFGPTFRAENSNTSRHLAEFWMIEPEMAFYDLDANMDLAEDFIQEVIRYVLKHCEEDL
AFLDKRLEDEEKRKPQAERSGMGLIEKLRFVTDQPFKRVTYTEAIEILRNSKPNKKKK
FQYPIDAWGADLQSEHERYLVEKHFQCPVILFNYPAEIKAFYMRLNDDGKTVRAMDIL
FPGIGEIVGGSQREERLDVLQEKMQQLGIDEKELWWYLDLRRFGTAVHSGFGLGFERL
VQFATGMGNIRDVIPFPRTPQNAEF"
misc_feature 138196..139620
/gene="asnC"
/locus_tag="RB2501_03845"
/note="asparaginyl-tRNA synthetase; Validated; Region:
asnC; PRK03932"
/db_xref="CDD:179678"
misc_feature 138241..138477
/gene="asnC"
/locus_tag="RB2501_03845"
/note="EcAsnRS_like_N: N-terminal, anticodon recognition
domain of the type found in Escherichia coli
asparaginyl-tRNA synthetase (AsnRS) and, in Arabidopsis
thaliana and Saccharomyces cerevisiae mitochondrial (mt)
AsnRS. This domain is a beta-barrel domain (OB...; Region:
EcAsnRS_like_N; cd04318"
/db_xref="CDD:58588"
misc_feature order(138259..138261,138304..138306,138388..138390,
138472..138474)
/gene="asnC"
/locus_tag="RB2501_03845"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:58588"
misc_feature order(138268..138270,138274..138279,138286..138288,
138325..138327,138331..138333,138376..138378,
138418..138420,138442..138444)
/gene="asnC"
/locus_tag="RB2501_03845"
/note="putative anticodon binding site; other site"
/db_xref="CDD:58588"
misc_feature 138511..139608
/gene="asnC"
/locus_tag="RB2501_03845"
/note="Asx tRNA synthetase (AspRS/AsnRS) class II core
domain. Assignment to class II aminoacyl-tRNA synthetases
(aaRS) based upon its structure and the presence of three
characteristic sequence motifs in the core domain. This
family includes AsnRS as well as...; Region: AsxRS_core;
cd00776"
/db_xref="CDD:29821"
misc_feature order(138538..138540,138544..138546,138556..138558,
138571..138573,138589..138594,138601..138603,
138613..138615,138634..138636,138643..138645,
138649..138651,138655..138663,138667..138669,
138760..138765,138769..138777,138811..138813,
138820..138822,138829..138840,138901..138906,
138931..138936,138949..138951,139486..139488,
139495..139506,139597..139605)
/gene="asnC"
/locus_tag="RB2501_03845"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:29821"
misc_feature 138655..138669
/gene="asnC"
/locus_tag="RB2501_03845"
/note="motif 1; other site"
/db_xref="CDD:29821"
misc_feature 138865..138876
/gene="asnC"
/locus_tag="RB2501_03845"
/note="motif 2; other site"
/db_xref="CDD:29821"
misc_feature order(138868..138870,138874..138876,138892..138897,
139387..139389,139396..139398,139531..139533,
139540..139542)
/gene="asnC"
/locus_tag="RB2501_03845"
/note="active site"
/db_xref="CDD:29821"
misc_feature 139531..139542
/gene="asnC"
/locus_tag="RB2501_03845"
/note="motif 3; other site"
/db_xref="CDD:29821"
gene 139680..141137
/locus_tag="RB2501_03850"
/db_xref="GeneID:8454462"
CDS 139680..141137
/locus_tag="RB2501_03850"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma-54"
/protein_id="YP_003193779.1"
/db_xref="GI:260060699"
/db_xref="GeneID:8454462"
/translation="MLKQHLQLKLSQKLSPQQIQLMKLIQLPTLAFEQRLKQEMEENP
ALESGKEDTGTLEDEYADTFDESEDSERIEAEDINIDDYLGDDEIPDYRTRANNYSED
DSDRQVPYAAGISFTQHLLNQLNTEYLDDQEWTIAEFLVGSVDESGYIRRPVADIMDD
LAFTQNVYTDEATIEKVLQKVQQLDPPGVGARSLEECLLLQLERKEPSPAVEMAIEIL
RKSFDHFSKKHYKKLLQKHDIGEEALREAIGEIEKLNPKPGGSYSGGTKIVEHVVPDF
TIRIVDGELELSLNGRNAPELHVSREYSNMLAGYKNARDKSKQQKDAVMFIKQKLDAA
KWFIDAIKQRQQTLYVTMNAIMEYQREYFMTGDERNLKPMILKDIADQIGMDVSTVSR
VANSKYVDTPYGTRLIKEYFSESIKNEQGEDVSTKEIKKILETVVGEENKRKPLTDDK
LAKILKEKGYPIARRTIAKYREQLGIPVARLRKEI"
misc_feature <139743..139820
/locus_tag="RB2501_03850"
/note="Sigma-54 factor, Activator interacting domain
(AID); Region: Sigma54_AID; pfam00309"
/db_xref="CDD:201144"
misc_feature 139746..141128
/locus_tag="RB2501_03850"
/note="RNA polymerase factor sigma-54; Reviewed; Region:
PRK05932"
/db_xref="CDD:180314"
misc_feature 140010..140588
/locus_tag="RB2501_03850"
/note="Sigma-54 factor, core binding domain; Region:
Sigma54_CBD; pfam04963"
/db_xref="CDD:147239"
misc_feature 140655..141128
/locus_tag="RB2501_03850"
/note="Sigma-54, DNA binding domain; Region: Sigma54_DBD;
pfam04552"
/db_xref="CDD:113327"
gene 141137..141742
/locus_tag="RB2501_03855"
/db_xref="GeneID:8454463"
CDS 141137..141742
/locus_tag="RB2501_03855"
/codon_start=1
/transl_table=11
/product="transmembrane protein"
/protein_id="YP_003193780.1"
/db_xref="GI:260060700"
/db_xref="GeneID:8454463"
/translation="MRFFSQLVSYLFHPLLIPLYGTVLYFRITPKFSPLEMQSGNVLP
VFILTVIIPVISMLILRNLGMMQTSRLLRPQERIYPLLIFLVLLLMVLFRVIPNNYAA
ELYFYFLGMIIATVASLLLALAGKPVSLHMAGVGTLLMYLISLSIHFEKNIVLAISAC
TLCTGLVGTARLYLQVHGRASVLTGWLIGLLSQLILVRFWF"
gene complement(141739..142500)
/locus_tag="RB2501_03860"
/db_xref="GeneID:8454464"
CDS complement(141739..142500)
/locus_tag="RB2501_03860"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193781.1"
/db_xref="GI:260060701"
/db_xref="GeneID:8454464"
/translation="MKRFFYVVHMKARIATFILLFCLVPVIGQEGNPTGTDLPKDSLD
TGAPLIDSEYLEDQFYVGFSFNLLLNQPEGVSQNNLISYGIYMGFIKDLPINPKRTLA
LGIGLGYGVNSYYSNLRAIQNGEDFQYIILDEEDSYKRNKIETHLVELPVQFRWRNST
ATDYSFWRIYTGFKLGYVVGSRSKFVTSEFKDSFYNTDTDNFRYGLTLNIGYNTINFH
VYYGLNNLFESDVPGPDGADLDMVPLRIGLIFYIL"
misc_feature complement(141820..142350)
/locus_tag="RB2501_03860"
/note="Outer membrane protein beta-barrel domain; Region:
OMP_b-brl_2; pfam13568"
/db_xref="CDD:205746"
gene complement(142548..143030)
/locus_tag="RB2501_03865"
/db_xref="GeneID:8454465"
CDS complement(142548..143030)
/locus_tag="RB2501_03865"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193782.1"
/db_xref="GI:260060702"
/db_xref="GeneID:8454465"
/translation="MAKFNKKKDGDIPAVSTASLPDIVFMLLFFFMTVTTMKDNTLMV
DNTLPNASETKKLEKKDRVIYIYVGKPTTQYQKTFGTEPKIQLNDKFASVSEVGDYIL
QERAKKPQDIQNVLTTALKVDKEANMGLISDIKQELRKVNALKVNYTTYEGDAFRNIQ
"
misc_feature complement(142572..>142892)
/locus_tag="RB2501_03865"
/note="Biopolymer transport protein ExbD/TolR; Region:
ExbD; cl00537"
/db_xref="CDD:193858"
gene complement(143043..143606)
/locus_tag="RB2501_03870"
/db_xref="GeneID:8454466"
CDS complement(143043..143606)
/locus_tag="RB2501_03870"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193783.1"
/db_xref="GI:260060703"
/db_xref="GeneID:8454466"
/translation="MADIAFLLLIFFLVTTTIETDAGLDRMLPPIEPPEEDVVIKQKN
IFTVNINKNGQLLVEEELTELQDLREKAMAFLDNGGDGTCNYCKGAGDEASSDNPGKA
IISLKNDRETRYGTYITVQNELVGAYNELRNREAQRLYGRDFTDMEAEYLNPETDEDV
REELKEKVLRVQELFPQKLSEAETTSN"
gene complement(143660..144040)
/locus_tag="RB2501_03875"
/db_xref="GeneID:8454467"
CDS complement(143660..144040)
/locus_tag="RB2501_03875"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193784.1"
/db_xref="GI:260060704"
/db_xref="GeneID:8454467"
/translation="MLPESEMPASEAIDSGAMNGMFIIMYILLGIAVVSSLLFALKNL
FSNPASLKKTLFVIVGFLLVVAIAYVLSDGADGTVEEMAGRGVTTTESTVKNIGAGLN
MFFILVIIAVASMLWGGIKKMSNK"
gene complement(144128..144790)
/locus_tag="RB2501_03880"
/db_xref="GeneID:8454468"
CDS complement(144128..144790)
/locus_tag="RB2501_03880"
/codon_start=1
/transl_table=11
/product="biopolymer transport protein"
/protein_id="YP_003193785.1"
/db_xref="GI:260060705"
/db_xref="GeneID:8454468"
/translation="MLQDDAAAADDRGFTQVLKEQFIQGGAGFMGIVLLCLILGLAVA
IERIIYLNMASTNTTKLKQQVEDALASGGVEAAKEVCRNTKGPVASIYYQGLDRAGES
IESAEKAVVAYGGVQMGQLEKNVSWLSLFIAIAPMLGFMGTVIGMIQAFQKISAVGNL
SASLIAGDIQVALLTTVFGLITAIILQIFYNYIIAKIDSIVNDMEDSSIILIDMLVDH
KK"
misc_feature complement(144146..144706)
/locus_tag="RB2501_03880"
/note="Biopolymer transport proteins [Intracellular
trafficking and secretion]; Region: TolQ; COG0811"
/db_xref="CDD:31153"
gene complement(145372..145459)
/locus_tag="RB2501_t10168"
/db_xref="GeneID:8454469"
tRNA complement(145372..145459)
/locus_tag="RB2501_t10168"
/product="tRNA-Ser"
/codon_recognized="UCC"
/db_xref="GeneID:8454469"
gene complement(145525..146562)
/locus_tag="RB2501_03885"
/db_xref="GeneID:8454470"
CDS complement(145525..146562)
/locus_tag="RB2501_03885"
/codon_start=1
/transl_table=11
/product="L-asparaginase I"
/protein_id="YP_003193786.1"
/db_xref="GI:260060706"
/db_xref="GeneID:8454470"
/translation="MARNGTGILLIYTGGTIGMVRDYGSGSLRAFDFNNLLQQIPELH
QLDCRIDTVAFANPIDSSNMDLPHWQQLATLIGEHYDRYDGFVVLHGSDTMSYTASAL
SFMLENLAKPVILTGSQLPIGDLRTDAKENLITSIQIAALSEGGEPLVREVCLYFEYK
LFRGNRTTKVNTEHFEAFDSPNYPPLAVSGVHLKVRKEALWRTPRKSALKVRTDLVNQ
VGVVRLFPGMHPDWLRHQLGAPGLKGVVLETFGAGNAPSAPWLLDALREAAGRGLHIV
NVTQCSGGSVLMGRYETSSGLLDIPLIDGRDITSEAALAKLMYLLGSSVSPKSFKTIF
ESPLRGEMSQN"
misc_feature complement(145570..146493)
/locus_tag="RB2501_03885"
/note="Type I (cytosolic) bacterial L-asparaginase;
Region: L-asparaginase_I; cd08963"
/db_xref="CDD:199207"
misc_feature complement(order(145609..145611,145621..145623,
145633..145635,145690..145692,145702..145716,
145723..145725,145795..145797,145807..145815,
145819..145821,145849..145854,145861..145863,
145870..145875,145879..145911,146041..146058,
146203..146208,146272..146274,146281..146286,
146356..146361,146365..146385,146395..146397,
146479..146487))
/locus_tag="RB2501_03885"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:199207"
misc_feature complement(order(146056..146058,146209..146211,
146284..146292,146377..146382))
/locus_tag="RB2501_03885"
/note="active site"
/db_xref="CDD:199207"
gene complement(146575..147342)
/locus_tag="RB2501_03890"
/db_xref="GeneID:8454471"
CDS complement(146575..147342)
/locus_tag="RB2501_03890"
/codon_start=1
/transl_table=11
/product="DNAse related protein"
/protein_id="YP_003193787.1"
/db_xref="GI:260060707"
/db_xref="GeneID:8454471"
/translation="MTLTDTHAHLYVEAFDEDRARMMARARAEGVERFFIPAIDSAYT
ERMRDLREAYPDEVFLMCGLHPTHVKEDFEAELRHVERELDRGGYVAVGEIGIDLYWD
QTRLEAQQEAFRRQIRMAKSRGLPIVIHCREAFDEIFEILAECQGPDLRGIFHCFTGT
LEQARLALAYGMKLGIGGVATFKNGKIDQFLDELPLESLVLETDSPYLAPTPHRGKRN
EPAYLKFVVSRLSEIYGIPEARIAEITTETSREVFGV"
misc_feature complement(146581..147336)
/locus_tag="RB2501_03890"
/note="TatD like proteins; E.coli TatD is a cytoplasmic
protein, shown to have magnesium dependent DNase activity;
Region: TatD_DNAse; cd01310"
/db_xref="CDD:30053"
misc_feature complement(order(146731..146733,146878..146880,
146953..146955,147316..147318,147322..147324))
/locus_tag="RB2501_03890"
/note="active site"
/db_xref="CDD:30053"
gene 147379..147816
/locus_tag="RB2501_03895"
/db_xref="GeneID:8454472"
CDS 147379..147816
/locus_tag="RB2501_03895"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193788.1"
/db_xref="GI:260060708"
/db_xref="GeneID:8454472"
/translation="MGTLKKFLLDRGFSAMPLERTRTDHLALSGSLNGVTGRFILDTG
ASNTCVGLDRTERFRLLTEISEIRAAGAGAVDMETLVSDGNTLALEGWERPDMQVVLF
DLSHVNQALESQDEPPVDGILGADILHGGKAVIDYDSCNLYLK"
misc_feature 147448..147762
/locus_tag="RB2501_03895"
/note="Bacterial aspartate proteases, retropepsin-like
protease family; Region: retropepsin_like_bacteria;
cd05483"
/db_xref="CDD:133150"
misc_feature 147502..147510
/locus_tag="RB2501_03895"
/note="catalytic motif [active]"
/db_xref="CDD:133150"
misc_feature 147502..147504
/locus_tag="RB2501_03895"
/note="Catalytic residue [active]"
/db_xref="CDD:133150"
gene complement(147900..149192)
/locus_tag="RB2501_03900"
/db_xref="GeneID:8454473"
CDS complement(147900..149192)
/locus_tag="RB2501_03900"
/codon_start=1
/transl_table=11
/product="dihydrolipoamide succinyltransferase"
/protein_id="YP_003193789.1"
/db_xref="GI:260060709"
/db_xref="GeneID:8454473"
/translation="MILEMKVPSPGESITEVEIAQWLVSDGDYVEKDQAIAEVDSDKA
TLELPAEESGVITLKAEEGDAVAVGEVVCLIDTDAEKPDASGGKDQEGSAGTDSVGKG
DEGSGGNAEKELDKQKEQAGQAGGSKAPQPRQAKETYASGVASPAAKKILDEKGIDPA
SVKGSGKDGRITKDDAVKAVPSMGSPGGGSRGESRSKLSMLRRKVAERLVSAKNETAM
LTTFNEVDMSAVFDIRAEHKEAFKEKHGVGLGFMSFFTKAVIRALQQFPAVNSMIDGK
EMITYDYCDISIAVSGPKGLMVPVIRNAENLSFRGIEEEVKRLALRARDGQITVDEMT
GGTFTISNGGVFGSMLSTPIINPPQSGILGMHNIVERAIVRDGAIAIAPVMYVALSYD
HRIIDGKESVGFLVAIKEAIENPVEHLMDGDLKKALEL"
misc_feature complement(147927..149192)
/locus_tag="RB2501_03900"
/note="dihydrolipoamide succinyltransferase; Validated;
Region: PRK05704"
/db_xref="CDD:180214"
misc_feature complement(<149022..149183)
/locus_tag="RB2501_03900"
/note="Lipoyl domain of the dihydrolipoyl acyltransferase
component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid
dehydrogenase multienzyme complexes, like pyruvate
dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH)
and branched-chain 2-oxo acid...; Region: lipoyl_domain;
cd06849"
/db_xref="CDD:133458"
misc_feature complement(order(149046..149048,149058..149075,
149094..149096))
/locus_tag="RB2501_03900"
/note="E3 interaction surface; other site"
/db_xref="CDD:133458"
misc_feature complement(149064..149066)
/locus_tag="RB2501_03900"
/note="lipoyl attachment site [posttranslational
modification]; other site"
/db_xref="CDD:133458"
misc_feature complement(148659..148763)
/locus_tag="RB2501_03900"
/note="e3 binding domain; Region: E3_binding; pfam02817"
/db_xref="CDD:202412"
misc_feature complement(147933..148568)
/locus_tag="RB2501_03900"
/note="2-oxoacid dehydrogenases acyltransferase (catalytic
domain); Region: 2-oxoacid_dh; pfam00198"
/db_xref="CDD:201074"
gene complement(149286..152108)
/gene="sucA"
/locus_tag="RB2501_03905"
/db_xref="GeneID:8454474"
CDS complement(149286..152108)
/gene="sucA"
/locus_tag="RB2501_03905"
/note="SucA; E1 component of the oxoglutarate
dehydrogenase complex which catalyzes the formation of
succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
reaction of 2-oxoglutarate with dihydrolipoamide
succinyltransferase-lipoate to form dihydrolipoamide
succinyltransferase-succinyldihydrolipoate and carbon
dioxide"
/codon_start=1
/transl_table=11
/product="2-oxoglutarate dehydrogenase E1 component"
/protein_id="YP_003193790.1"
/db_xref="GI:260060710"
/db_xref="GeneID:8454474"
/translation="MDRYSFLNAAHTAFFSDLYDRYLTHPDSVEPSWRAFFQGFDFGM
ESALEEIGIDAEAGVVRTAGGDEAAMPLSLKKEFQVVRLIDGYRSRGHLFTQTNPVRE
RRTYTPSLEIENFGLEESDLEKVFSAGDIIGIGPSTLREIIDHLTRIYCDAIGVEYMY
IRSPERVEWIQQWLNVNDNHPNFSPERKKYILRKLNEAVSFEGFLHTKYVGQKRFSLE
GNESLIPAVDAIVERAAELGVQQFVMGMAHRGRLNVLTNIFGKPATDIFSEFEGKDYE
QEIFDGDVKYHLGWTSMRKTNSGDSINMNIAPNPSHLETVGAVVEGITRAKQDRHFPE
DFSKVLPIVVHGDAAIAGQGIAYEVVQMAGLDGYGTAGTIHIVVNNQIGFTTNYLDGR
TSTYCTDVGKVTLSPVLHINADDAEAVVHAALFALEYRMKFRRDVFLDLLGYRKYGHN
EGDEPRFTQPKLYKAIAKHQNPRDIYAERLMSEGVIDADFVKKLEEDYKAKLEEELRD
SKKEDKTRITAFMADEWDGFENVREWEMMEPVETGVPKDKLEAVARVITQLPEDKKFL
RKVDKLVKERHKMFFETNRLDWAMGELLAYGTLLQEGFDVRISGQDVERGTFSHRHAV
MKVEESEEEVLLLNHISEEQGDFQIYNSLLSEYGVVGFEYGYAMASPNTLTIWEAQFG
DFSNGAQIMIDQYLSAAEDKWKLQNGLVLFLPHGYEGQGAEHSSARMERYLQLCARDN
MYVADVSTPANLFHLLRRQMLVNFRKPLVVFTPKSLLRHAKCVSTVEELAEGRFQEVI
DDAGASVKKVKSLVFCTGKFYYDLLAAREELGREDVALVRLEQLFPLPVVQMEELIEK
YSHAEDLVWAQEEPRNMGAWSHLMMHFPDASRFRVASRRFYASPAAGSPARSKMRHQQ
VIDYVFDPKKDNMSRPVPADVATDEE"
misc_feature complement(149346..152108)
/gene="sucA"
/locus_tag="RB2501_03905"
/note="2-oxoglutarate dehydrogenase E1 component;
Reviewed; Region: sucA; PRK09404"
/db_xref="CDD:181824"
misc_feature complement(150720..151508)
/gene="sucA"
/locus_tag="RB2501_03905"
/note="Thiamine pyrophosphate (TPP) family, E1 of
OGDC-like subfamily, TPP-binding module; composed of
proteins similar to the E1 component of the 2-oxoglutarate
dehydrogenase multienzyme complex (OGDC). OGDC catalyzes
the oxidative decarboxylation of...; Region:
TPP_E1_OGDC_like; cd02016"
/db_xref="CDD:48179"
misc_feature complement(order(150963..150965,150969..150971,
151062..151073,151170..151172))
/gene="sucA"
/locus_tag="RB2501_03905"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:48179"
misc_feature complement(149772..150353)
/gene="sucA"
/locus_tag="RB2501_03905"
/note="Transketolase, pyrimidine binding domain; Region:
Transket_pyr; pfam02779"
/db_xref="CDD:202390"
misc_feature complement(order(149907..149909,149913..149915,
150033..150035,150048..150053,150144..150146,
150153..150158))
/gene="sucA"
/locus_tag="RB2501_03905"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132915"
misc_feature complement(order(150018..150020,150027..150032,
150102..150104,150111..150119,150123..150128,
150135..150137,150144..150146,150153..150158))
/gene="sucA"
/locus_tag="RB2501_03905"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132915"
misc_feature complement(order(150048..150050,150141..150143))
/gene="sucA"
/locus_tag="RB2501_03905"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132915"
gene complement(152217..153236)
/locus_tag="RB2501_03910"
/db_xref="GeneID:8454475"
CDS complement(152217..153236)
/locus_tag="RB2501_03910"
/codon_start=1
/transl_table=11
/product="UDP-glucose 4-epimerase"
/protein_id="YP_003193791.1"
/db_xref="GI:260060711"
/db_xref="GeneID:8454475"
/translation="MKVLVTGGLGFIGSHTVVELQQAGHQVVIIDNCSNASEDVLDGI
FEITGQRPEFERMDLREKAAVNDFFARHTDLVGVIHFAASKAVGESVEKPLLYYENNI
GTLVYLLQQLVARGGSSFIFSSSCTVYGQADQMPITEDAPVKPAESPYGNTKQMGEEI
IRDTCRVHPELRAISLRYFNPIGAHPSAAIGELPLGVPANLVPFITQTAAGLREELSV
FGDDYPTPDGTCIRDYIHVVDLARAHVVALERLFGQQNQSNYEVFNIGTGTGSSVMEV
IRSFERVSGEKLNFRVVGRRSGDVVEAYADTTRANNELGWKAESSLDDAMASAWTWEK
KVRKL"
misc_feature complement(152235..153233)
/locus_tag="RB2501_03910"
/note="UDP-glucose 4 epimerase, subgroup 1, extended (e)
SDRs; Region: UDP_G4E_1_SDR_e; cd05247"
/db_xref="CDD:187558"
misc_feature complement(152232..153230)
/locus_tag="RB2501_03910"
/note="UDP-glucose 4-epimerase; Region: PLN02240"
/db_xref="CDD:177883"
misc_feature complement(order(152694..152696,152700..152705,
152775..152777,152787..152789,152862..152870,
152937..152939,152982..152984,152988..152996,
153060..153068,153129..153146,153201..153212,
153216..153218))
/locus_tag="RB2501_03910"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:187558"
misc_feature complement(order(152745..152753,152757..152762,
152769..152771,152781..152783,152790..152792,
152898..152900,152907..152912,152919..152924,
152931..152933,152940..152945,152952..152960,
152964..152966))
/locus_tag="RB2501_03910"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187558"
misc_feature complement(order(152775..152777,152787..152789,
152862..152864,152934..152936))
/locus_tag="RB2501_03910"
/note="active site"
/db_xref="CDD:187558"
misc_feature complement(order(152340..152342,152349..152351,
152418..152420,152535..152537,152541..152543,
152547..152549,152580..152591,152634..152642,
152697..152705,152787..152789,152856..152864))
/locus_tag="RB2501_03910"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187558"
gene complement(153271..154449)
/locus_tag="RB2501_03915"
/db_xref="GeneID:8454476"
CDS complement(153271..154449)
/locus_tag="RB2501_03915"
/codon_start=1
/transl_table=11
/product="pigmentation and extracellular proteinase
regulator"
/protein_id="YP_003193792.1"
/db_xref="GI:260060712"
/db_xref="GeneID:8454476"
/translation="MRKIQMVDLVGQYADIREEVRKSFDSILESAAFINGPEVKAFQE
DLEAYLGVKHVIPCANGTDALQIAMMGLGLKPGDEVITADFTFAATVEVIALLGLTPV
LVDVEPDTFNIDTEAVRKAITPKTRAIVPVHLFGQCADMETLLEIAREHDLFLIEDNA
QAIGANYLFSDGRLQKAGAIGHVGATSFFPSKNLGAYGDGGALFTDDDALAHRIRGIV
NHGMYQRYYHDVVGVNSRLDSLQAAVLRAKLPHLDRYCEKRRAAARYYNASFKDREGI
TVPTTVRSCEGICDTCDCHVFHQYTLRIGGGKRDALAKRLTEAGIPHGIYYPVPLHRQ
KAYADARYKESDFAVTNQLSEEVISLPMHTELDEEQLAYICRTVLEFIEQAEPSSGLI
"
misc_feature complement(153316..154407)
/locus_tag="RB2501_03915"
/note="DegT/DnrJ/EryC1/StrS aminotransferase family;
Region: DegT_DnrJ_EryC1; pfam01041"
/db_xref="CDD:201569"
misc_feature complement(153316..154371)
/locus_tag="RB2501_03915"
/note="3-amino-5-hydroxybenzoic acid synthase family
(AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate
(PLP)-dependent aspartate aminotransferase superfamily
(fold I). The members of this CD are involved in various
biosynthetic pathways for secondary...; Region: AHBA_syn;
cd00616"
/db_xref="CDD:99740"
misc_feature complement(order(153472..153474,153874..153879,
153889..153891,153967..153969,153976..153978,
154264..154269))
/locus_tag="RB2501_03915"
/note="inhibitor-cofactor binding pocket; inhibition site"
/db_xref="CDD:99740"
misc_feature complement(order(153874..153876,153889..153891,
153967..153969,153976..153978,154192..154194,
154264..154269))
/locus_tag="RB2501_03915"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99740"
misc_feature complement(153874..153876)
/locus_tag="RB2501_03915"
/note="catalytic residue [active]"
/db_xref="CDD:99740"
gene 154498..155844
/locus_tag="RB2501_03920"
/db_xref="GeneID:8454477"
CDS 154498..155844
/locus_tag="RB2501_03920"
/codon_start=1
/transl_table=11
/product="3-deoxy-D-manno-octulosonic-acid transferase"
/protein_id="YP_003193793.1"
/db_xref="GI:260060713"
/db_xref="GeneID:8454477"
/translation="MEFQKNRNLAQNPLPLYFLYDLAVRLASVFLHIPAVFSPKIRSF
LRGRRGVKAYLESFREPGRPLIWMHTASLGEFEQGLPVLERLMAAYPGHQFLVTFFSP
SGYEVKKGKVPGAGTCYLPLDTRQNVREFLDGARPDIALFVKYEVWPNFFAGLRSRDI
PLVLFSARFRERQVFFQWYGGLMRRALQGVRQFYVQDPLSASLLNGIGIHRIAVCGDT
RLDRVMEIRSRDNRLDFMEAFVKGRKCLVAGSTWPEDEKAILPFVRARAGATCCAVIA
PHKTDSKTVGELMKRLGSGAVTYSEWSKRLEEAGGLASGKSGDTPREPGLPAGENILV
IDTIGLLTRIYSYADLAYVGGGFATGLHNTLEPAVFGIPVLIGPRYAGFREAEALVEA
GGILPVAGPLEFEETAGKLLDNATYRRQIGAINRDYIDKNAGASIQILAGIRKLIG"
misc_feature 154543..155838
/locus_tag="RB2501_03920"
/note="3-deoxy-D-manno-octulosonic-acid transferase [Cell
envelope biogenesis, outer membrane]; Region: KdtA;
COG1519"
/db_xref="CDD:31708"
misc_feature 154618..155166
/locus_tag="RB2501_03920"
/note="3-Deoxy-D-manno-octulosonic-acid transferase
(kdotransferase); Region: Glycos_transf_N; pfam04413"
/db_xref="CDD:203003"
gene 155857..156087
/locus_tag="RB2501_03925"
/db_xref="GeneID:8454478"
CDS 155857..156087
/locus_tag="RB2501_03925"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193794.1"
/db_xref="GI:260060714"
/db_xref="GeneID:8454478"
/translation="MFRIAARLALAGLLLIFLGCFPDLREKSRRADEENATPATPDTA
GLRNRQKERDTPGPPRKAKDTLRPRMALVSGR"
gene 156233..157546
/locus_tag="RB2501_03930"
/db_xref="GeneID:8454479"
CDS 156233..157546
/locus_tag="RB2501_03930"
/codon_start=1
/transl_table=11
/product="xylose transporter"
/protein_id="YP_003193795.1"
/db_xref="GI:260060715"
/db_xref="GeneID:8454479"
/translation="MDSKIFKISLIAALAGFLFGFDTVVISGAEKKLQLLWETSDAYH
GTVVIGMALFGTVIGAIFGGFPTNRFGRKRTLIWIGVLYSVSAIGSALSNDPVTFGIF
RFLGGIGIGASTVAAPTYISEIAPADQRGRLVGMYQFNIVFGILVAYFSNYLLNGIGD
NDWRWMVGVEAFPALIYTAFAFGIPKSPRWLVTQHREEEAAGILEKLGLKLSVGDIVR
DLEANVQAGAETIFMKKYRFPLLLAFLIAFFNQFSGINAFLYYAPRIFELAGLEESTA
LLSSIGIGVTNLVFTLLGIYLIDRLGRRTLMYYGSFGYIVSLALVAAAFFFNWTGMAV
PIFLFVFIASHAIGQGAVIWVFISEVFPNHLRGSGQSFGCSVHWVLAWLIPSSVPFLM
SWIGPAPVFGFFAFMMVLQLLFVHFMMPETKGISLEELSKRLLRK"
misc_feature 156245..157528
/locus_tag="RB2501_03930"
/note="D-xylose transporter XylE; Provisional; Region:
xylE; PRK10077"
/db_xref="CDD:182225"
misc_feature 156260..>156790
/locus_tag="RB2501_03930"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(156299..156301,156308..156316,156320..156325,
156377..156379,156386..156391,156398..156400,
156410..156415,156419..156424,156560..156565,
156572..156577,156584..156589,156596..156598,
156632..156637,156644..156649,156665..156667)
/locus_tag="RB2501_03930"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature <156983..157489
/locus_tag="RB2501_03930"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene 158038..160401
/locus_tag="RB2501_03935"
/db_xref="GeneID:8454480"
CDS 158038..160401
/locus_tag="RB2501_03935"
/codon_start=1
/transl_table=11
/product="chitinase"
/protein_id="YP_003193796.1"
/db_xref="GI:260060716"
/db_xref="GeneID:8454480"
/translation="MSAQCSGATFEEENGIAVIQAENVNLTGAWRQQSGNGSTGNGYI
TWTGSQSFQTPGTGTIQYTVRINNPGTYRFKWRSRVGEGNSSTEHNDTWLRIQNVNDF
YGLRGNSRVYPRGSGKSPAPEGASSNNWFKVYMNSLNWDWRTVTSDFDAHDIYFQVNS
PRVITIQLSARSRNHFIDRMVVYKENQYSEAASESLSRAQTICDGSSNPPPPPPPDGG
GDDNNAPTVNITNPDNGESFAAGSSVTVQLNANDSDGSIAQHQIFLNGNLVDTDGANY
TPYTIQNLASGNYTIRALVTDNDGATDDATVSISVGSAPPPSGGGGDDGGDEDPPASD
GAIESLTLVNTANNANIANITNGLTLDKSNLPANLSIRANTSSASIGNINFTLSGPIN
QSKTEGDDPYYLFGDIGVDPIGRNFPPGTYSITAQAVNGNTLSYNFTITDNGDGDGGG
DNPPPPPPSGDSGVVRLVLVNAANNTEIGVLTPGIELNADDLPNSLSIRADTDPVDVG
NVLFDLSGPISNTQNEGLAPYYVFGDIGVDPVGRSFPNGNYTVTANPSTGQTLSLSFS
IVSGGGSTPPPADDDVTFTLIDANSNQVVRNLTSGTNISSPFDRNIRVTTTASGVESV
LMVLNGAQNRTQTENLAPYALFGDNGGNYNANDFPNGSYTLTATFYAGPNASGSVIAR
ETLSFTTSGNNTSGKTSGVLTKTIAYPNPVQGREVNLKFPIPKNNPMEYRLISSGFQV
LGTGTMDAQGSDETNVSIQSLEQAPSGIYYLIITDGVITESVKIIKE"
misc_feature 160156..160398
/locus_tag="RB2501_03935"
/note="Por secretion system C-terminal sorting domain;
Region: Por_Secre_tail; TIGR04183"
/db_xref="CDD:200434"
gene 160603..160737
/locus_tag="RB2501_03940"
/db_xref="GeneID:8454481"
CDS 160603..160737
/locus_tag="RB2501_03940"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193797.1"
/db_xref="GI:260060717"
/db_xref="GeneID:8454481"
/translation="MIMEDQISVGTRFLNGFLTVMVVLLVLVLGAVIISLILAAFGVF
"
gene 160961..161128
/locus_tag="RB2501_03945"
/db_xref="GeneID:8454482"
CDS 160961..161128
/locus_tag="RB2501_03945"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193798.1"
/db_xref="GI:260060718"
/db_xref="GeneID:8454482"
/translation="MKSILWLVAVICIIAWLLGLLGIIPGLGTSSLIHVLLVIAVIVI
LYNIISGRKAL"
gene complement(161205..161286)
/locus_tag="RB2501_t10166"
/db_xref="GeneID:8454483"
tRNA complement(161205..161286)
/locus_tag="RB2501_t10166"
/product="tRNA-Leu"
/codon_recognized="CUG"
/db_xref="GeneID:8454483"
gene complement(161327..161413)
/locus_tag="RB2501_03950"
/db_xref="GeneID:8454484"
CDS complement(161327..161413)
/locus_tag="RB2501_03950"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193799.1"
/db_xref="GI:260060719"
/db_xref="GeneID:8454484"
/translation="MKKNTGLPREKKNFFVHIFKKQYICHPI"
gene 161466..162302
/locus_tag="RB2501_03955"
/db_xref="GeneID:8454485"
CDS 161466..162302
/locus_tag="RB2501_03955"
/codon_start=1
/transl_table=11
/product="2-hydroxyhepta-2,4-diene-1,7-dioate isomaerase"
/protein_id="YP_003193800.1"
/db_xref="GI:260060720"
/db_xref="GeneID:8454485"
/translation="MKIYNTTAGPVADENGSFFLLDAAWDALASHTAPRQKAGELLKN
AAATDNPLGSPQTLLPPIGRQEVWASGVTYYRSRSARMEESRDAGGGSFYDRVYEADR
PELFFKAAPYRVTGDGGAVRIRKDSGWDVPEPELTLLLNPMGAITGYTIGNDMSSRSI
EGENPLYLPQAKSYDGSTALGPCLYLPESPLPGDTEISIVILRNGSEAFAGQVEISQI
KRSFVELANWLYREMSFPYGCFLMTGTGIVPPNDFSLKPGDEIRITIPPIGTLSNTVA
GN"
misc_feature 161772..162293
/locus_tag="RB2501_03955"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; pfam01557"
/db_xref="CDD:201859"
gene complement(162397..163725)
/locus_tag="RB2501_03960"
/db_xref="GeneID:8454486"
CDS complement(162397..163725)
/locus_tag="RB2501_03960"
/codon_start=1
/transl_table=11
/product="dehydrogenase-like protein"
/protein_id="YP_003193801.1"
/db_xref="GI:260060721"
/db_xref="GeneID:8454486"
/translation="MATRRDFIRTTSASAAALGLHASLFPQAGLSGILGANEKVVCAC
IGIRSRGKAHVLAINAYPDAILKYNCDVDDSILEEHNAWCEKRLGSVPQVEKDFRRIL
DDPEVDAVFIATPEHWHAPMAIMALQAGKHVYVEKPCSHNPAENEMLVAAQKKYGKVV
QMGNQQRSAKTSIQAIDDIRKGVIGNVYKGEAYYSNNRGSIGTGREIPVPDTLDWELW
QGPAPRTAYRDNVHPYNWHWFRRWGTGEIHNNGTHEIDICRWALGVDLPQRVSSFGGK
FTYDDDWEFPDNQQATFEFAGGKFITWTGHSRGMMKPERPGRGITIYGDKGTIELSRN
YYKRYDLGGNPVQFEFEPELSATTDTQGIGSLDVAHVANFFDAIRKGDVLAAPIDDAS
KSTMLCHLGNMAQDAGHDLTVDPATGKVLNSEKAMQSWGRSYEKGWELKV"
misc_feature complement(162481..163602)
/locus_tag="RB2501_03960"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature complement(163237..>163437)
/locus_tag="RB2501_03960"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
gene complement(163732..165096)
/locus_tag="RB2501_03965"
/db_xref="GeneID:8454487"
CDS complement(163732..165096)
/locus_tag="RB2501_03965"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193802.1"
/db_xref="GI:260060722"
/db_xref="GeneID:8454487"
/translation="MTHSAAVLSALLLLAACAGGPEDDTPWQELFNGEDLSGWTQLGG
EAEYAVRDGAIVGTTVHDTPNSFMATEQLYEDFILELEYLVDSTMNSGIQVRSNSQDY
YMDGRVHGYQIEIDPSDRGWSAGIYDEARRGWLVPVTDNPDAQAAFRQGDWNHYRIEA
IGDTLKTWINGVPAAHLIDDKTSEGFIALQVHSIGDDAQAGTEIIWRDIRILTDSLAR
AYSRDTPLEPVVTKNNLTQAEKEDGWQLLWDGESTEGWHGARLEDFPDYGWEIEDGVL
TVLASGGGESEAGGDIVTDSLYGDFDLRVDFRITEGANSGIKYYVDTELNKGEGSAIG
LEYQILDDERHPDAKLGNHEGSRTMASLYDLIRADPAKPVNPIGQWNTARILSRDGHV
EHWLNGVKVLEYERGSDAYRQLVSESKYKIWPGFGEAGRGHILLQDHGNRVSFRNIKI
KTLN"
misc_feature complement(164464..165021)
/locus_tag="RB2501_03965"
/note="Domain of Unknown Function (DUF1080); Region:
DUF1080; pfam06439"
/db_xref="CDD:203451"
misc_feature complement(163744..164370)
/locus_tag="RB2501_03965"
/note="Domain of Unknown Function (DUF1080); Region:
DUF1080; pfam06439"
/db_xref="CDD:203451"
gene complement(165206..166501)
/locus_tag="RB2501_03970"
/db_xref="GeneID:8454488"
CDS complement(165206..166501)
/locus_tag="RB2501_03970"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193803.1"
/db_xref="GI:260060723"
/db_xref="GeneID:8454488"
/translation="MEYIPLLVLILSFICLLAIGTPVAWSIVVSATLTLLVSIPMLPA
LTTVSQRIAAGLDSFALLAIPFFVLSGELMNRGGIARRLIDFAKTLVGALPGGLALIN
IISAMLMGAIAGSALASASAMGTMLGPEMEKQGYDREFGAAVNITSATTGLVIPPSNI
LIVYSLASGGASIAALFLAGYIPGILTGFFLMVVAWAWARKKGYRTGERSSVGQVFRT
FLDAVPSLLLLVVVIGGIVAGIFTATEASAIAVLYSLVLGLVYREITLDNLPRIALDA
SATTAIVMLLIGASMSMSWALSYEHIPQEISEGLLGITDNKVAILILINLILLLVGIF
MDMTPAVLIFTPIFLPVVTKLGIDPVHFGIIMILNLCIGLCTPPVGSVLFVGVGIAKT
SIEKVVRPLLPLFVAMIIALFLVTYIPELSLWLPSLFDL"
misc_feature complement(165239..166450)
/locus_tag="RB2501_03970"
/note="DctM-like transporters; Region: DctM; pfam06808"
/db_xref="CDD:148424"
misc_feature complement(165224..166444)
/locus_tag="RB2501_03970"
/note="TRAP transporter, DctM subunit; Region: dctM;
TIGR00786"
/db_xref="CDD:129868"
gene complement(166505..166966)
/locus_tag="RB2501_03975"
/db_xref="GeneID:8454489"
CDS complement(166505..166966)
/locus_tag="RB2501_03975"
/codon_start=1
/transl_table=11
/product="TRAP-type C4-dicarboxylate transport system,
small permease component"
/protein_id="YP_003193804.1"
/db_xref="GI:260060724"
/db_xref="GeneID:8454489"
/translation="MKTFRQRLDRLLASALILIMTAMVLNVLWQVFSRYVLGSPSSFT
DELARYLMIWLGVLGAAYVAGKNGHVAIDILPRRAKPGTQRRLRQAVNWIILLFCFFG
LVIGGGRLVFVTYVLEQYSPALRLPLAYVYLVIPLSGLIVIYYKSHDLLRR"
misc_feature complement(166532..166966)
/locus_tag="RB2501_03975"
/note="TRAP-type C4-dicarboxylate transport system, small
permease component [Carbohydrate transport and
metabolism]; Region: DctM; COG3090"
/db_xref="CDD:32904"
gene complement(166963..167967)
/locus_tag="RB2501_03980"
/db_xref="GeneID:8454490"
CDS complement(166963..167967)
/locus_tag="RB2501_03980"
/codon_start=1
/transl_table=11
/product="TRAP-type C4-dicarboxylate transport system,
periplasmic component"
/protein_id="YP_003193805.1"
/db_xref="GI:260060725"
/db_xref="GeneID:8454490"
/translation="MNRKRTSLKTIRAFLIGAGLCLVLAGCRQGPPGRTIHLAHGLDV
THSVHLAMVRMGEDLERLSGGRLRMEIFPNQQLGSEREILELLQIGTLDMTKVSAATL
ENFAPKTRILGLPYLFRDREAAFEILDGPIGQELLDDGLEFWLKGLGFYDAGFRSFYA
MDQPITHPDDLVGKKVRVMESVTAINMIRSMGGAPTPISWGELYTALQQGVVDAAENN
PPSFYLARHYEVCKYYSLDEHTFSPDVLIAGTRFWDQLNEQEKAWIREAADNSIAYQR
ELWALAEAEALEKVAAAGVEISRPDKRPFAEGSREAYRLYEADTTLGRLIRQIKEFQQ
"
misc_feature complement(166966..167946)
/locus_tag="RB2501_03980"
/note="TRAP-type C4-dicarboxylate transport system,
periplasmic component [Carbohydrate transport and
metabolism]; Region: DctP; COG1638"
/db_xref="CDD:31825"
misc_feature complement(167011..167856)
/locus_tag="RB2501_03980"
/note="Bacterial extracellular solute-binding protein,
family 7; Region: SBP_bac_7; pfam03480"
/db_xref="CDD:202660"
gene complement(167987..169384)
/locus_tag="RB2501_03985"
/db_xref="GeneID:8454491"
CDS complement(167987..169384)
/locus_tag="RB2501_03985"
/codon_start=1
/transl_table=11
/product="uronate isomerase"
/protein_id="YP_003193806.1"
/db_xref="GI:260060726"
/db_xref="GeneID:8454491"
/translation="MTFIREDFLLESPQARTLYFDYAADLPIIDYHNHLSPRQIATDH
NFENSTQAWLSGDHYKWRAMRTLGIGEEYITGDAPDEEKFMKWAWAVPQTVRNPLYHW
THLELQRYFGITDLLDERNARDIYEQTSLRLRQPSHSARGLLGRMRVEVVCTTDDPVD
SLEFHRQAQSLKTGPRLLPAFRPDAAYSIGDPKAYSRYLDRLETAAGMSIRNYADLLQ
ALDARLAYFHKQGCRIADHGLGQLAFFATPYCDIEKLFRDVQAGRVPEAQEMRYFEFA
TLSHLCRQYHSRGWVQQFHLGALRDTNTRMRETLGPDTGFDSIGDFPQARGLAGFLDH
LDRSDQLAKTILYNLNPSWNEVFATMAGNFNDGSIRGKIQFGSGWWYNDQLQGMERQL
DALSNMGLLSCFVGMLTDSRSLLSFPRHEYFRRLLCNLLGADIERGRLPDDTDFLGKI
VRDICYFNAKAYFDF"
misc_feature complement(167990..169381)
/locus_tag="RB2501_03985"
/note="Glucuronate isomerase; Region: UxaC; pfam02614"
/db_xref="CDD:202310"
gene 169654..170826
/locus_tag="RB2501_03990"
/db_xref="GeneID:8454492"
CDS 169654..170826
/locus_tag="RB2501_03990"
/codon_start=1
/transl_table=11
/product="NADH-dependent dyhydrogenase"
/protein_id="YP_003193807.1"
/db_xref="GI:260060727"
/db_xref="GeneID:8454492"
/translation="MPTRNIGRLLLALLLFLLASGYALAQPEVAESRNPLSANAPMRV
GVAGLTHGHVNWVFSSAVRGDIEIAGIAEPNREVARKYCEQYGYPADRVYESLEAMLD
AENPEAVSAFGTIYDHLDIVKACAPRGIHVMVEKPLAVNLEHAREMAALAMENNIHLL
TNYETTWYPSNHEAYRRAVGDSAIGAIRKIRVRDGHRGPKKIGVPPEFLAWLTDPELN
GGGALTDFGCYGANLITWLMNGQRPECVTAITRQLQPENNPEVEDEAIVLLEYPGATG
IIEASWNWPIGRKDLVIHGLTGSVFADNRHDFRVRIAEGYDGFREESLRLEERPAPMN
DPFLYFTAVVRGNVHPEPMALSSLENNLIVMEILDAARRSAEAGKTVKLHMPVTEE"
misc_feature 169774..170802
/locus_tag="RB2501_03990"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature 169777..170142
/locus_tag="RB2501_03990"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature 170179..170502
/locus_tag="RB2501_03990"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; pfam02894"
/db_xref="CDD:202453"
gene 170894..171931
/locus_tag="RB2501_03995"
/db_xref="GeneID:8454493"
CDS 170894..171931
/locus_tag="RB2501_03995"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193808.1"
/db_xref="GI:260060728"
/db_xref="GeneID:8454493"
/translation="MDPALYFFFIIIAVIPVLPYHLLGWKWLHLPWLPIGLVGTALAF
IIGFKNNASYGRLWEARKIWGGIVNTSRSFTAMINDFITNQFADTPKSPKDLQAIRVA
MVLRHVAWMTSLRHALRVKKPWEVTAYNKIDQKYMERMEIREYTYSLEDELEGYLSDE
EKRYVLSLKNKQSACLTLQSKHLAELRQNGLIEDFRHMEMQGMITELFTLQGQAERIK
NFPYPRQFATLNLYFVWLFILLLPFALMSEFDQIGQSLLETGDQNPVFRFIALNFVWL
SVPFSVVISWIFLSMERIGDVSENPFEGNPNDVPITTMSRGIEIDIRQMVGDDPEAIP
GPIPEEWDSQM"
misc_feature 170912..171865
/locus_tag="RB2501_03995"
/note="Bestrophin, RFP-TM, chloride channel; Region:
Bestrophin; cl01544"
/db_xref="CDD:207446"
gene 172068..172793
/locus_tag="RB2501_04000"
/db_xref="GeneID:8454494"
CDS 172068..172793
/locus_tag="RB2501_04000"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193809.1"
/db_xref="GI:260060729"
/db_xref="GeneID:8454494"
/translation="MKITEIAPDVFRISIYIPEMNLQFNHFLIRDEQPMLYHAGMKQL
FPVLREAVSSLINPADIKWIGFSHFEVDECGALNEWLQIAPHAQPVCSEVGALVNMGD
FSIRPAHAMAQDAILSTGKYRYRFIRTPHLPHGWDAGVLFEETNKTLLCSDLLHQNGD
VKELTDSDILDLHSQSLLEFENGPLMGYTPYTKRTGSILNQLADLRPTTLATMHGSSF
NGDCRQTLLDLDQVLREVWENIA"
misc_feature 172068..>172745
/locus_tag="RB2501_04000"
/note="Uncharacterized flavoproteins [Energy production
and conversion]; Region: FpaA; COG0426"
/db_xref="CDD:30775"
misc_feature <172233..172535
/locus_tag="RB2501_04000"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; cl00446"
/db_xref="CDD:207049"
gene 172865..173689
/locus_tag="RB2501_04005"
/db_xref="GeneID:8454495"
CDS 172865..173689
/locus_tag="RB2501_04005"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_003193810.1"
/db_xref="GI:260060730"
/db_xref="GeneID:8454495"
/translation="MHTIQEFQPANQLAPYIACYFTGEMNSQALPESSLTVIPNGCLE
LIVHLEETYCRLPGSRGLTATPDYMLIGMFCQPYQVHFSQSVTVFAIRFKPEALSIIL
KLGGPDILESYADIEQILDPGFRDLCHRLRELDTTAERIAITEKHLFALLSKQPETSN
YFTKATQILRQSATGDLKDVSAELNISQRQLERKFKEVMGISPKKYLRLLRIGKVMNA
MQSRSDLNLTNVAYHCGYFDQAHFTKDFKLITGRTPTGFLHDQDAYMYLPESRELR"
misc_feature 173369..173488
/locus_tag="RB2501_04005"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature 173390..173626
/locus_tag="RB2501_04005"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature 173531..173641
/locus_tag="RB2501_04005"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene complement(173840..173921)
/locus_tag="RB2501_t10164"
/db_xref="GeneID:8454496"
tRNA complement(173840..173921)
/locus_tag="RB2501_t10164"
/product="tRNA-Leu"
/codon_recognized="CUA"
/db_xref="GeneID:8454496"
gene complement(174019..175704)
/locus_tag="RB2501_04010"
/db_xref="GeneID:8454497"
CDS complement(174019..175704)
/locus_tag="RB2501_04010"
/codon_start=1
/transl_table=11
/product="adenylate/guanylate cyclase"
/protein_id="YP_003193811.1"
/db_xref="GI:260060731"
/db_xref="GeneID:8454497"
/translation="MKLSTSQKALRQVLKRDATIRNLLEGLCEKLGVTFCFEDPQGQV
LWGKRDDASRAIPMENDGEPLGTFYSADENAQPVMETLKVLFLKEWEKKKIGKEVLGL
YREINMIYGLSEMISEKIDAESIAQVTLQEAAQIIDTTHGLFLMYDPEQDRVIEVADF
GDNPKRSSFVKNQEALLKELIRRGTSAIVPGSRVAANPALSHLKAVMYAPLKVKHRTL
GMVILGHEDAVEYTAAELKLLTTITLQSATAIESAHLYQKGLAEVKEREEAIRKVHDA
SQKFVPSEFIKSLGKVRITEVELGDLVEREVTVVFADIRGFTTLSESISPRDNFLFVN
GFNNRMGPIIRRNGGFIMQYLGDGFMALFPEGAQGALNASVQMQELLREYNAERAAKK
RLPVQVGVGMQNGKLIMGITGDSERLDAAIISDTVNTAARIEGLSKHYGASILLTEEC
RENLTDPGAFDFRYLGQVQLKGKNKPIDLYECIDGDAEDLRAHKIQHLPTFDEAMDHY
FNRDFAMAAVTFQRIFKMHENDLPAKLFLNRSAHLITQDLGDDWKGVETMTTK"
misc_feature complement(174952..175344)
/locus_tag="RB2501_04010"
/note="GAF domain; Region: GAF_2; pfam13185"
/db_xref="CDD:205366"
misc_feature complement(174952..175344)
/locus_tag="RB2501_04010"
/note="GAF domain; Region: GAF_3; pfam13492"
/db_xref="CDD:205670"
misc_feature complement(174262..174819)
/locus_tag="RB2501_04010"
/note="Adenylate cyclase, family 3 (some proteins contain
HAMP domain) [Signal transduction mechanisms]; Region:
CyaA; COG2114"
/db_xref="CDD:32297"
misc_feature complement(174262..174789)
/locus_tag="RB2501_04010"
/note="cyclase homology domain; Region: CHD; cd07302"
/db_xref="CDD:143636"
misc_feature complement(order(174292..174294,174409..174414,
174421..174426,174436..174444,174625..174627,
174634..174642,174646..174648,174751..174768,
174772..174774))
/locus_tag="RB2501_04010"
/note="nucleotidyl binding site; other site"
/db_xref="CDD:143636"
misc_feature complement(order(174634..174636,174766..174768))
/locus_tag="RB2501_04010"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143636"
misc_feature complement(order(174292..174294,174421..174423,
174430..174441,174472..174474,174481..174483,
174643..174648,174682..174684,174694..174696,
174703..174708,174715..174717,174751..174753))
/locus_tag="RB2501_04010"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143636"
gene complement(175718..176095)
/locus_tag="RB2501_04015"
/db_xref="GeneID:8454498"
CDS complement(175718..176095)
/locus_tag="RB2501_04015"
/codon_start=1
/transl_table=11
/product="two-component response regulator"
/protein_id="YP_003193812.1"
/db_xref="GI:260060732"
/db_xref="GeneID:8454498"
/translation="MNKKLLIVDDEAHIRMLIEQTLEDLEDEGVQLLFADNGEAALSI
IQKEKPDLVFLDVMMPKMNGMEVCQRVKKELKLTDTYIILLTAKGQEVDRQKGLDMGA
DKYMTKPFDPDEMFEIAEEILMK"
misc_feature complement(175736..176083)
/locus_tag="RB2501_04015"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(175727..176080)
/locus_tag="RB2501_04015"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(175769..175774,175781..175783,
175838..175840,175904..175906,175928..175930,
176066..176071))
/locus_tag="RB2501_04015"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(175928..175930)
/locus_tag="RB2501_04015"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(175904..175912,175916..175921))
/locus_tag="RB2501_04015"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(175766..175774)
/locus_tag="RB2501_04015"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(176123..180490)
/locus_tag="RB2501_04020"
/db_xref="GeneID:8454499"
CDS complement(176123..180490)
/locus_tag="RB2501_04020"
/codon_start=1
/transl_table=11
/product="PAS/PAC Sensor Hybrid Histidine Kinase"
/protein_id="YP_003193813.1"
/db_xref="GI:260060733"
/db_xref="GeneID:8454499"
/translation="MRKPLHSARTISWMCLAVLSLFCSHSLTAQEQIGRPMINNYNYQ
DYQGAPINWWALEDDQGNMYFANQFQLLQYDGVNWKGIETESGCRSLAKGEDGTIYVG
GTGSLGYISATENGTYEYVSMVKQLPEEHQAFEDVWFVDSFKGRIYFWTEYKVFIWDG
TRMKVLVSEHRLHVSAIVDDTYYIRIWDVGLSVLNDQDEFELLPNGEKFAGERIYSIL
KYDDERILLGTRTQGFFLYDGKDFTPFKTEIDDIMDGEIYLPGLALDDGRFVINSNNV
GAYLLSHEGELLQKYTSETGLQEGSVLNLYLDSRGVLWLPLFNGISNVNLNSSFTTLD
SNMGINTTVFEVVRHQGVLYMSSNGGILYLDESDMTVRPIEGTYGQGGNFLTFRDRLY
VATNGMGLIEIIGTKFRDVRRDQNYDFRAQYLWQSTFDPNRIFVTYNTGLKTFFYNET
TRQLEEESTTTKFIAGTGNIIEEPDGSLWLDTTSDGEVLKVIPDISNGAMNLDNSELI
YYGPEQGLPDSGLGLYEIFDEKVIFSGEVEATFGYNASTDRFEEKEFFFEEYIDWDRP
GSQGFTSEDGKHWFNSGAGIMIAEKKADGKISVNTDTFRELKNNRIFTIYPEEPDAEG
NWVVWFSGPGGVIRYQGQLDKPSIPEFQVNVRSITMSGDSLLYAGNIAYPGDLEIDYE
NNSMTFGYAAPLFIGQKDMKYSTWLTGLDDDWSDWTAQTSREYINLPPGSYTFKVRAQ
NVYGDISEEASVPFSIDYPWYRSWWAYALYLIGFLAIIWMAVKARTGILLNQQKVLED
RVEERTREVQQRLNELATVNSVSQALNDKLELNALIQLVGKKMKDVFNSDITYLAILD
EETNVINFVYQDGDEMPPMQLGEGLTSRIIQSGEPLLINRDTDIMAEYNKHGIKQTGK
QAISYLGVPIPVEDKIIGVLSVQSTKQASRFTQEDKKLLTTIAINVGVALHNADLYEQ
AREAKARAEDANEAKSAFLSTVSHELRTPLTSVLGFAKIIRKRLTEKIFPAVTVDDQK
IKRTMKQVSENLDVVVSEGERLTTLINDVLDLAKIESGRMDWNMKPIFLQDVIGRAVS
ATSSLFEEKKLQLKKNVPDDLPLINGDEDKLIQVVINLLSNAVKFTKKGSVTIDAYRE
ENQLIVEVQDTGIGIAEEDKHKIFERFRQAGDTLTDKPQGTGLGLPICREIIEHHGGI
IWMKSEPGVGSTFFFSIPMMGEGSDQPIQLERILKSLKKQIKHSSQVKSQESATILVV
DDDTPIRSLLRQELSDAGYQVKEAANGKAALDMVRISKPDLIILDVMMPEINGFDVAA
VLKNDPATMDIPIIILSIVQDKERGLRIGVDRYLTKPIDTEKLFHEVDELLEQGVSHK
RVLVVDEDTSTVKSLSDMLSARGYKVMEANPDSLMDMAFEVKPDIIMLKSIRNGDEKS
LKELKLKAGMENVMFFVYQ"
misc_feature complement(<178943..>179929)
/locus_tag="RB2501_04020"
/note="Predicted periplasmic ligand-binding sensor domain
[Signal transduction mechanisms]; Region: COG3292"
/db_xref="CDD:33101"
misc_feature complement(178223..178408)
/locus_tag="RB2501_04020"
/note="Y_Y_Y domain; Region: Y_Y_Y; pfam07495"
/db_xref="CDD:203649"
misc_feature complement(177569..178003)
/locus_tag="RB2501_04020"
/note="Domain present in phytochromes and cGMP-specific
phosphodiesterases; Region: GAF; smart00065"
/db_xref="CDD:197499"
misc_feature complement(176804..177961)
/locus_tag="RB2501_04020"
/note="Signal transduction histidine kinase, nitrogen
specific [Signal transduction mechanisms]; Region: NtrB;
COG3852"
/db_xref="CDD:33642"
misc_feature complement(177299..177541)
/locus_tag="RB2501_04020"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(177314..177316,177326..177328,
177335..177337,177347..177349,177356..177358,
177368..177370,177467..177469,177476..177478,
177488..177490,177497..177499,177509..177511,
177521..177523))
/locus_tag="RB2501_04020"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(177503..177505)
/locus_tag="RB2501_04020"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(176828..177136)
/locus_tag="RB2501_04020"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(176840..176842,176846..176851,
176864..176866,176870..176872,176918..176929,
177008..177013,177017..177019,177023..177025,
177029..177031,177095..177097,177104..177106,
177116..177118))
/locus_tag="RB2501_04020"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(177104..177106)
/locus_tag="RB2501_04020"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(176921..176923,176927..176929,
177011..177013,177017..177019))
/locus_tag="RB2501_04020"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature complement(176387..176716)
/locus_tag="RB2501_04020"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(176378..176713)
/locus_tag="RB2501_04020"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(176420..176425,176432..176434,
176480..176482,176546..176548,176570..176572,
176699..176704))
/locus_tag="RB2501_04020"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(176570..176572)
/locus_tag="RB2501_04020"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(176546..176554,176558..176563))
/locus_tag="RB2501_04020"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(176417..176425)
/locus_tag="RB2501_04020"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(176213..176359)
/locus_tag="RB2501_04020"
/note="cheY-homologous receiver domain; Region: REC;
smart00448"
/db_xref="CDD:197730"
gene 180628..182019
/locus_tag="RB2501_04025"
/db_xref="GeneID:8454500"
CDS 180628..182019
/locus_tag="RB2501_04025"
/codon_start=1
/transl_table=11
/product="peptidase, M20/M25/M40 family protein"
/protein_id="YP_003193814.1"
/db_xref="GI:260060734"
/db_xref="GeneID:8454500"
/translation="MPSPGSYIAAHKERFVQELLQLLRLPSISADPAFSQDVLETAGA
VAQALIHAGCDNVEVCDTEGYPIVYGEKILDPELPTVLVYGHYDVQPPDPVDLWDSPP
FEPVIRETELHPEGAIYARGASDDKGQFYMHVKALEYMIRENKLPCNVKFMVEGEEEV
GSVSLEEFLKANRDRLSNDIILISDTGMIARDIPSITTGLRGLSYVEVEVTGPNRDLH
SGLYGGAVANPINVLAKMIASLHDENNRITIPGFYDKVVELSREERELMAEAPFDLEA
YKKALDIDAVHGEAGYVTNERNAIRPTLDVNGIWGGYTGEGAKTVIPSKAYAKISMRL
VPNQDWREIMDVFTAHFEKIAPPGVRVSVKPHHGGQAYVTPIDHIGYQAASKAYEETF
GKTPVPQRGGGSIPIVTLFEQELESKIILMGFGLDSDAIHSPNEHFGIWNYLKGIETI
PYFYRYFTEMSRG"
misc_feature 180643..182004
/locus_tag="RB2501_04025"
/note="hypothetical protein; Provisional; Region:
PRK08201"
/db_xref="CDD:169276"
misc_feature 180673..181998
/locus_tag="RB2501_04025"
/note="Uncharacterized M20 Dipeptidases; Region:
M20_dipept_like_3; cd05680"
/db_xref="CDD:193555"
misc_feature order(180883..180885,181000..181002,181099..181104,
181180..181182,181921..181923)
/locus_tag="RB2501_04025"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193555"
misc_feature order(181228..181230,181240..181242,181246..181248,
181258..181275,181279..181299,181315..181323,
181327..181329,181336..181341,181348..181350,
181426..181428,181507..181509,181516..181521,
181534..181557,181570..181593,181612..181614,
181618..181620,181624..181626,181831..181836,
181918..181929)
/locus_tag="RB2501_04025"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:193555"
gene 182198..182563
/locus_tag="RB2501_04030"
/db_xref="GeneID:8454501"
CDS 182198..182563
/locus_tag="RB2501_04030"
/codon_start=1
/transl_table=11
/product="antibiotic resistance-related regulatory
protein"
/protein_id="YP_003193815.1"
/db_xref="GI:260060735"
/db_xref="GeneID:8454501"
/translation="MKLSRTEEALMNLLWEQKQAFLKDLVDAYPDPKPAPTTVATLLK
RMAEKGYVAYRTHGRSREYYPTVSKKAYFAGHFNKLIANFFNDSTAQFASFFTREADL
SREQLEELKSLIEEEIKKK"
misc_feature 182204..182506
/locus_tag="RB2501_04030"
/note="Penicillinase repressor; Region: Pencillinase_R;
pfam03965"
/db_xref="CDD:146546"
gene 182566..184116
/locus_tag="RB2501_04035"
/db_xref="GeneID:8454502"
CDS 182566..184116
/locus_tag="RB2501_04035"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193816.1"
/db_xref="GI:260060736"
/db_xref="GeneID:8454502"
/translation="MVTYLLKSTACLLVFYLFYHFVLERQTNHSFKRYYLLASLVAGL
VIPVIPMVRTVALLSPTFVNWVADAGGTENLSGPGAWEATAPAIGWMGYLLGGSLFGV
AFVRNLIRLVRKTRKNPRLSGPDHTKVLLSRNEPPHTFFRYLFLFGPAYERGEIPEGI
LAHEAAHIRQRHSLDLLFMELACLVFWFHPVIWLYRRAVRLNHEFLADREVLRSGHSR
KDYQRLLLVITQSSNQPACTHAFHYSSIKKRIIVMKNSTSHSRKWLTCLVLLPLSALL
FFSFSDRKTEYLPAGDILEIPPPDTAFPELRGDVPAELPGVSALSGEPRSIQQGATRA
EMREYERLARKYNEMLRGDDIHIIGDEVSLMKQIYAKMSDKQRADTEPFPELPPPPPA
PDPHPVPAPHSARSPQPAQQAHPPQPAQPAKPRNGEQQEIREVPPPPPAPSAHGTRPG
ATPPPPPPPPDPEEHLRELASQGADFFYRNQAIPSEKALELFRAGEVNRIQVRNSDGG
TPQVYLAE"
misc_feature <183043..183318
/locus_tag="RB2501_04035"
/note="BlaR1 peptidase M56; Region: Peptidase_M56;
cl15829"
/db_xref="CDD:210229"
gene 184227..185327
/locus_tag="RB2501_04040"
/db_xref="GeneID:8454503"
CDS 184227..185327
/locus_tag="RB2501_04040"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193817.1"
/db_xref="GI:260060737"
/db_xref="GeneID:8454503"
/translation="MIRSFFIICSGADRELLGTCSQGEQNKYAGIGATIFFTALMAFL
AAGYALYTVFDSVWAAIPFGLVWGLLIFNLDRYIVSTMRKRDHFGKELLQASPRIVLA
VIIAVVISKPLELKIFEKEINQVLLERKNDLTLANQEQIAQQYNPAIAEKQAEIAGLK
QEIADKEAATDALYNTYIAEAEGREGTLLVGKGPVYAEKREKHDASLAELADLRETNT
AKITAIESEIATLESGYAQAVEGSQSVIDGFDGLMARIDALGELPWFPSFFIFLLFLS
IETAPILVKLMTPKGPYDMKLEDEETTVSAWVKQKVDQRFKLADTDRLLNERIYGEIA
DEEAVYAYKKEKAEQLLRLQADKFHELQSRHL"
misc_feature 184263..185135
/locus_tag="RB2501_04040"
/note="Domain of unknown function (DUF4407); Region:
DUF4407; pfam14362"
/db_xref="CDD:206530"
gene complement(185363..187213)
/locus_tag="RB2501_04045"
/db_xref="GeneID:8454504"
CDS complement(185363..187213)
/locus_tag="RB2501_04045"
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein mutS"
/protein_id="YP_003193818.1"
/db_xref="GI:260060738"
/db_xref="GeneID:8454504"
/translation="MTTPREAYAARLKGLREEREAISRRLHLTALFRVLSFLGAGGAL
YLAAASHGAFAAVSLVLLALFGWLVGRNEDLKYQRRKRDELIRLNETETRVLDLDYED
LPEGTGYRDSGHAFSEDLDLFGPGSFFQYANRCGLLPGAERLAKWLTDNDTGSVRGKQ
EAIRELAPQVNWRQEYYAVARISDKGATVHSALDWLEGYGPFTRPTYRYAPYLFGLVS
LGLLGAFLAGWVTPWAVGGVFLSGLVIAGYFAKRVGKLAADASRVQDVFEGYARLVAH
VEDREFSSEMLCREQGKLRKDGEAVSVLLKRFSRHLSALDQRNNLLVALLGNGFLLWD
LLKSRAVEAWITAHGSQVRHWFGGIAALDAWCSLGNFAFNHPDYTYPGLEVAAYVGDS
GQPVSLGGNADRPFVVAASGLAHPLLPPGNRVANDFEIREGGFFVITGANMAGKSTFL
RTLSLSLVMANCGLPVCATSFSYTPLPLISSMRTSDSLARSESYFFAELKRLQFLIAA
LEERPSFVVLDEILKGTNSTDKAKGSRLFLGRLVRMGATGVIATHDLSLCQVADTEPR
VENWHFDAEIRQGELHFDYRLKPGVCHSMNASFLLRKMGIVEDPEGKQPS"
misc_feature complement(185396..185989)
/locus_tag="RB2501_04045"
/note="MutS-like homolog in eukaryotes. The MutS protein
initiates DNA mismatch repair by recognizing mispaired and
unpaired bases embedded in duplex DNA and activating endo-
and exonucleases to remove the mismatch. Members of the
MutS family possess...; Region: ABC_MutS-like; cd03283"
/db_xref="CDD:73042"
misc_feature complement(185873..185896)
/locus_tag="RB2501_04045"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73042"
misc_feature complement(order(185555..185557,185654..185659,
185765..185767,185870..185878,185882..185887))
/locus_tag="RB2501_04045"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73042"
misc_feature complement(185765..185776)
/locus_tag="RB2501_04045"
/note="Q-loop/lid; other site"
/db_xref="CDD:73042"
misc_feature complement(185711..185752)
/locus_tag="RB2501_04045"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73042"
misc_feature complement(185654..185671)
/locus_tag="RB2501_04045"
/note="Walker B; other site"
/db_xref="CDD:73042"
misc_feature complement(185636..185647)
/locus_tag="RB2501_04045"
/note="D-loop; other site"
/db_xref="CDD:73042"
misc_feature complement(185549..185569)
/locus_tag="RB2501_04045"
/note="H-loop/switch region; other site"
/db_xref="CDD:73042"
gene complement(187210..187569)
/locus_tag="RB2501_04050"
/db_xref="GeneID:8454505"
CDS complement(187210..187569)
/locus_tag="RB2501_04050"
/codon_start=1
/transl_table=11
/product="MmcQ-like protein"
/protein_id="YP_003193819.1"
/db_xref="GI:260060739"
/db_xref="GeneID:8454505"
/translation="MHIEEFREYCLAKKGVTEGFPFGQDVLVFKVMGKMFALTGLDRH
PPQANLKADPERIPGLREEYDGRILPGYHMNKDHWNTVMLQGLPADLLRELIDHSYEL
IVASLPAKSRKEWEALP"
misc_feature complement(187261..187542)
/locus_tag="RB2501_04050"
/note="Protein of unknown function (DUF419); Region:
DUF419; pfam04237"
/db_xref="CDD:202939"
gene complement(187581..188000)
/locus_tag="RB2501_04055"
/db_xref="GeneID:8454506"
CDS complement(187581..188000)
/locus_tag="RB2501_04055"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193820.1"
/db_xref="GI:260060740"
/db_xref="GeneID:8454506"
/translation="MNIRKILFITGAALLLLPGVLSAQNDTDMKTFDPAFAHTVYFWL
HNPDRQEDRQAFEASLKKFLSRSAYAKTNFIGTPPQASRDVVDGSFTYSLIVTFESAE
AQAAYQAEQPHLEFISESEHLWKKVIVYDSTGIPMND"
misc_feature complement(187602..187889)
/locus_tag="RB2501_04055"
/note="Stress responsive A/B Barrel Domain; Region: Dabb;
smart00886"
/db_xref="CDD:197954"
gene complement(188017..188661)
/locus_tag="RB2501_04060"
/db_xref="GeneID:8454507"
CDS complement(188017..188661)
/locus_tag="RB2501_04060"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193821.1"
/db_xref="GI:260060741"
/db_xref="GeneID:8454507"
/translation="MLELFLGLLLGAMTMYWFYALFTRKRRKDQTEHQSTVILEKIRS
VCKLISVEGDFAEIYRYENRREHFGNLFSSKKKALIVVHAKAHIGYDFKKLEITSDPK
RKTVYLKQFPQPEILSIEPELEFYDIRNGIFNAFTPEDMTALNREAKAQIREKIPESG
LMDSARHEAIEAILVMEKIVETIGWKLNFEALELGKEPRMLPRVYTSGNDQKDT"
misc_feature complement(188110..188547)
/locus_tag="RB2501_04060"
/note="Protein of unknown function (DUF4230); Region:
DUF4230; pfam14014"
/db_xref="CDD:206184"
gene complement(188654..189022)
/locus_tag="RB2501_04065"
/db_xref="GeneID:8454508"
CDS complement(188654..189022)
/locus_tag="RB2501_04065"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193822.1"
/db_xref="GI:260060742"
/db_xref="GeneID:8454508"
/translation="MKRVLQLEEILLFAGGIFLFAQLPFAWWWFPLLILTPDIGMVGY
LAGPVTGAWTYNLFHHRGFAFAIWVAGMLLALPLLQLAGIILFSHVAMDRIFGYGLKH
TRGFQYTHLGEIGKNAKRHA"
misc_feature complement(188681..189022)
/locus_tag="RB2501_04065"
/note="Domain of unknown function (DUF4260); Region:
DUF4260; pfam14079"
/db_xref="CDD:206249"
gene complement(189019..189765)
/locus_tag="RB2501_04070"
/db_xref="GeneID:8454509"
CDS complement(189019..189765)
/locus_tag="RB2501_04070"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193823.1"
/db_xref="GI:260060743"
/db_xref="GeneID:8454509"
/translation="MQTRLEKNGTTYLADLSAPTDLSIPVSANGITAWGVPGATLEPH
GQPGFTGSVATGASVNFYDITFNPHAHGTHTECMGHITERPYSVNTIPPAPWMEARLV
SIEPEPAGKGAHVSLGQLREALGTPSCEAVVIRTYPNPPSKRGRSWSGSNPPYLDPKA
AAWLAAEGVLHLLIDLPSVDPEEDGGALAAHTAFWGLPGNPRPAATITELIFVPDSLA
DGRYLLNLQVAAIENDASPSRPLLFKLKEL"
misc_feature complement(189220..189705)
/locus_tag="RB2501_04070"
/note="Putative cyclase; Region: Cyclase; pfam04199"
/db_xref="CDD:190907"
gene complement(189778..190911)
/locus_tag="RB2501_04075"
/db_xref="GeneID:8454510"
CDS complement(189778..190911)
/locus_tag="RB2501_04075"
/codon_start=1
/transl_table=11
/product="oxygen-independent coproporphyrinogen III
oxidase"
/protein_id="YP_003193824.1"
/db_xref="GI:260060744"
/db_xref="GeneID:8454510"
/translation="MSGIYLHIPFCKQACHYCDFHFSTTLKHKQGLLEAMELEMEQRR
DELGGQPAETLYFGGGTPSLLTGAEIGQLIRRAAACFGLAADAEITLEANPDDLPPGR
LEELALSPVNRLSIGIQSFHETELRWMNRAHSAREALECLEHAAARFANYSIDLIYGI
PGSRPDDWKRTLEVALGFDPPHISAYALTVEPDTALARFIDKGVTPGVDDHRAREDFS
HLVETLQQAGYDHYEISNFGKPGFHSRNNTAYWQGKSYVGIGPSAHSFDGGNRRWNVA
SNLKYLRAVTEGKTYWEAEQLSTRDRYNEAVMTGLRTQWGVSENRVGSEFGPRYAEYL
RQQAAPYLEKGLLASRSGHLVATEAGKFLVDGIASDLFMINLK"
misc_feature complement(189799..190905)
/locus_tag="RB2501_04075"
/note="coproporphyrinogen III oxidase; Validated; Region:
PRK05628"
/db_xref="CDD:180172"
misc_feature complement(190315..190881)
/locus_tag="RB2501_04075"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature complement(order(190348..190353,190441..190443,
190561..190563,190630..190638,190729..190734,
190738..190740,190855..190863,190867..190869,
190873..190875,190879..190881))
/locus_tag="RB2501_04075"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
misc_feature complement(189826..190023)
/locus_tag="RB2501_04075"
/note="HemN C-terminal domain; Region: HemN_C; pfam06969"
/db_xref="CDD:203555"
gene complement(190993..191559)
/gene="ruvC"
/locus_tag="RB2501_04080"
/db_xref="GeneID:8454511"
CDS complement(190993..191559)
/gene="ruvC"
/locus_tag="RB2501_04080"
/note="endonuclease; resolves Holliday structures; forms a
complex of RuvABC; the junction binding protein RuvA forms
a hexameric ring along with the RuvB helicase and
catalyzes branch migration; RuvC then interacts with RuvAB
to resolve the Holliday junction by nicking DNA strands of
like polarity"
/codon_start=1
/transl_table=11
/product="Holliday junction resolvase"
/protein_id="YP_003193825.1"
/db_xref="GI:260060745"
/db_xref="GeneID:8454511"
/translation="MSKLTASETIILGIDPGTTIMGFGIIRVQGKQMEFVQMNELILR
KYDDPFTKLKLIFDRTLELIDTYHPDEIAIEAPFYGKNVQSMLKLGRAQGVAMAAGLS
RQVPITEYLPKKIKMAITGNGNASKEQVARMLQSLLELKSLPKNLDSTDGLAAAVCHF
YNQGKPTGAKSYSGWEAFVKQNTGRTSE"
misc_feature complement(191071..191532)
/gene="ruvC"
/locus_tag="RB2501_04080"
/note="Holliday junction resolvases (HJRs) are
endonucleases that specifically resolve Holliday junction
DNA intermediates during homologous recombination. HJR's
occur in archaea, bacteria, and in the mitochondria of
certain fungi, however this CD includes...; Region:
RuvC_resolvase; cd00529"
/db_xref="CDD:29627"
misc_feature complement(order(191107..191109,191116..191118,
191335..191337,191515..191517))
/gene="ruvC"
/locus_tag="RB2501_04080"
/note="active site"
/db_xref="CDD:29627"
misc_feature complement(order(191179..191181,191212..191214,
191221..191223,191296..191298,191317..191319,
191434..191436,191503..191505))
/gene="ruvC"
/locus_tag="RB2501_04080"
/note="putative DNA-binding cleft [nucleotide binding];
other site"
/db_xref="CDD:29627"
misc_feature complement(order(191254..191259,191269..191271,
191278..191283,191287..191292,191299..191304,
191311..191313,191326..191328,191389..191391,
191398..191400))
/gene="ruvC"
/locus_tag="RB2501_04080"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29627"
gene complement(191552..192037)
/locus_tag="RB2501_04085"
/db_xref="GeneID:8454512"
CDS complement(191552..192037)
/locus_tag="RB2501_04085"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193826.1"
/db_xref="GI:260060746"
/db_xref="GeneID:8454512"
/translation="MNHRVLCGILLAGCLSACNLFESREQRTQKLVDAEIQTINFNEV
DQFPLFDDCQETEDKTVQRRCFEETLLMHLSMTLQNFEFRSQASLKDTLHIDFKVDAQ
GVISITSVEQHPAIVEANPEFERIVTGSLRSLPRLQPALKRGIPVATRFRLPLVLQTD
E"
gene 192208..192687
/locus_tag="RB2501_04090"
/db_xref="GeneID:8454513"
CDS 192208..192687
/locus_tag="RB2501_04090"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193827.1"
/db_xref="GI:260060747"
/db_xref="GeneID:8454513"
/translation="MILGVLGSFLPVLPGPPISWVGLLLLTLTSAVPDNWWFLGITAA
VAVVVVGLDYWIPAMGTKRFGGSRAGMIGTTVGLLVAIIFPVLGIAGIIIWPFLGAVV
GELINKSNSQTALKAAFGSFVGFLTGTFLKFLVSIIYFGLFLSKAWDYRSGLFPWFD"
misc_feature 192229..192651
/locus_tag="RB2501_04090"
/note="Protein of unknown function (DUF456); Region:
DUF456; pfam04306"
/db_xref="CDD:202967"
gene complement(192766..193317)
/locus_tag="RB2501_04095"
/db_xref="GeneID:8454514"
CDS complement(192766..193317)
/locus_tag="RB2501_04095"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193828.1"
/db_xref="GI:260060748"
/db_xref="GeneID:8454514"
/translation="MIEDLIRRRRSIFPDQYNDQPIDRATLFRVLEAANWAPTHKRTE
PWRFKVVTGEKREALGAFLRDKYLDLDPSPKEFKAKKLYHNPQRAAAIIAICMQRDPE
ERLPEWEEVAATAMAVQNMWLVCTELGIGSYWSSPGLIRHMGEFFDLAEGERCLGFFY
MGYYDEAPPEGTRSPLDEKISWE"
misc_feature complement(192829..193311)
/locus_tag="RB2501_04095"
/note="Nitroreductase-like family which includes NADH
oxidase and arsenite oxidiase. NADH oxidase catalyses the
oxidation of NAD(P)H and accepts a wide broad range of
compounds as electron acceptors, such as nitrocompound.
Arsenite oxidase in a...; Region: Arsenite_oxidase;
cd02135"
/db_xref="CDD:48382"
misc_feature complement(order(192907..192912,193195..193197,
193270..193272,193282..193284,193288..193290))
/locus_tag="RB2501_04095"
/note="putative FMN binding site [chemical binding]; other
site"
/db_xref="CDD:48382"
gene complement(193371..194252)
/locus_tag="RB2501_04100"
/db_xref="GeneID:8454515"
CDS complement(193371..194252)
/locus_tag="RB2501_04100"
/codon_start=1
/transl_table=11
/product="regulatory protein, LysR:LysR,
substrate-binding"
/protein_id="YP_003193829.1"
/db_xref="GI:260060749"
/db_xref="GeneID:8454515"
/translation="MRHLRYFMAVADLLNFHRAAERLDITQPGLSRQIQQLEYHLGTQ
LLLRNRREVRLTPAGAYLQEQLIPQLNRLENIFGQARRIGQGQAGEIRIGFLGSAMQE
VIPRLLLELDSRYPDIRTSLEELSNQAQVRALLQERLDLGFVRLSDLPPDLEGCPVIR
ETFSLVVPEDHPFRGKSLGSIREFAGESFILFTPEYSPDYYRTVLSICEDAGFHPQVS
HKSVHAHTIFKLVAAGLGVAIVPTSLQHGFQLKVRFLELSGIRQRAVLTAVWNRAHHS
NALQHCIEHLRGSSPEP"
misc_feature complement(193395..194252)
/locus_tag="RB2501_04100"
/note="DNA-binding transcriptional activator XapR;
Provisional; Region: PRK09986"
/db_xref="CDD:182183"
misc_feature complement(194076..194252)
/locus_tag="RB2501_04100"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(193395..193985)
/locus_tag="RB2501_04100"
/note="The C-terminal substrate binding domain of an
uncharacterized LysR-type transcriptional regulator
similar to regulators involved in the catabolism of
aromatic compounds, contains type 2 periplasmic binding
fold; Region: PBP2_LTTR_aromatics_like_2; cd08448"
/db_xref="CDD:176139"
misc_feature complement(order(193500..193502,193554..193559,
193563..193568,193584..193589,193644..193649,
193749..193751,193881..193883,193887..193889,
193893..193895,193917..193919,193926..193931,
193935..193940,193947..193949,193968..193970))
/locus_tag="RB2501_04100"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176139"
misc_feature complement(order(193653..193655,193674..193679,
193818..193820,193965..193967))
/locus_tag="RB2501_04100"
/note="putative substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:176139"
gene 194353..195933
/locus_tag="RB2501_04105"
/db_xref="GeneID:8454516"
CDS 194353..195933
/locus_tag="RB2501_04105"
/codon_start=1
/transl_table=11
/product="histidine ammonia-lyase"
/protein_id="YP_003193830.1"
/db_xref="GI:260060750"
/db_xref="GeneID:8454516"
/translation="MSQKTPSFAYGADRLTVGKALGIARGTLPGQLTEPVLERVRANR
EAVARIVAKGEPVYGINTGFGPLCTTRISADQTSLLQVNILKSHSVGVGDPIRGEIAR
LMLILKLHALSMGHSGVAETTLKRILWHIENEVTPVVPSQGSVGASGDLAPLAHLFLP
LIGLGRVTYQGEVRDTAEVLGKFGMDPLELGPKEGLALINGTQFIAAHGVSVVEKMQQ
CLSQADIIGAMMLEGLQGSLRPFHEELHKLRPYPGTRHVAHRVRNLLKGSEILEDHID
CERVQDPYSLRCIPQVHGASRTAWLHLKELLETELNSVTDNPVVIDEELSISGGNFHG
QPLAMALDYACLAASEIGNISDRRIYLALEGNQTDLPKLLMKDTGLNSGYMMLQYTSA
ALASENKSLCFPASADSIPTSMGQEDHVSMGSISGRKALQVLENVEKIQAVELLTAAQ
AFEYRKPLKSGWFLEKVHGLVRTRVSFAEADRVFATDIEAGLELIRSGALIRLLDTVS
RKKALSLKTDYDELFETY"
misc_feature 194395..195717
/locus_tag="RB2501_04105"
/note="Phenylalanine ammonia-lyase (PAL) and histidine
ammonia-lyase (HAL); Region: PAL-HAL; cd00332"
/db_xref="CDD:176460"
misc_feature order(194524..194532,194536..194538,194542..194544,
194593..194595,194602..194604,194926..194940,
194950..194952,195202..195204,195211..195213,
195301..195303,195334..195336)
/locus_tag="RB2501_04105"
/note="active sites [active]"
/db_xref="CDD:176460"
misc_feature order(194539..194544,194599..194601,194608..194631,
194692..194694,194776..194781,194818..194820,
194827..194829,195082..195087,195094..195099,
195103..195105,195112..195114,195193..195195,
195199..195207,195211..195216,195223..195228,
195244..195249,195256..195258,195265..195270,
195277..195282,195289..195294,195307..195315,
195325..195327,195331..195351,195355..195360,
195367..195369,195379..195381,195400..195402,
195409..195411,195421..195423,195433..195435,
195442..195444,195451..195453,195487..195492,
195496..195501,195505..195516,195520..195522,
195526..195543,195547..195558,195589..195609,
195616..195618,195634..195639,195646..195648,
195655..195660)
/locus_tag="RB2501_04105"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176460"
gene 195933..197285
/locus_tag="RB2501_04110"
/db_xref="GeneID:8454517"
CDS 195933..197285
/locus_tag="RB2501_04110"
/codon_start=1
/transl_table=11
/product="imidazolonepropionase"
/protein_id="YP_003193831.1"
/db_xref="GI:260060751"
/db_xref="GeneID:8454517"
/translation="MEQNKMDRKTQSKANPETHAGPDAEGHGQGGQPVLHLVGPFAQL
LPMSGLPLKGALPDTSLTVLERAGILMEGSRVRAIGPFDQMEQEARRMRATITRLPGN
QVALPGLVDAHTHSCFAGSRARDYALRNSGRSYLEIAEAGGGIWDTVTATRKATPEQL
RNLLRDRCRRFAADGITTLEVKSGYGLSVEEELKMLRVIAETAADVSQDIIPTCLAAH
SMPRDFDGSAGEYLEQIAEELLPVLLKEGLARRVDAFVEQSAFSPDQILPYLETARRL
GYDITIHADQFTTGGSEVAIRCGARSADHLEASGPAEIAALAKSDVVATALPGATLGL
GCGYTPARALLDAGAALAIASDYNPGSAPMGDLLTQAALLGPAEKISHAEIFAGITFR
AAAALGLDDRGALAPGMLADFVLFDTDHYNEILYHQGRLRPSAVWKSGRRIPDSNGKN
"
misc_feature 196113..197261
/locus_tag="RB2501_04110"
/note="imidazolonepropionase; Validated; Region: PRK09356"
/db_xref="CDD:181795"
misc_feature 196137..197252
/locus_tag="RB2501_04110"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have a...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:206955"
misc_feature order(196269..196271,196275..196277,196779..196781,
196845..196847,196998..197000)
/locus_tag="RB2501_04110"
/note="active site"
/db_xref="CDD:30035"
gene 197335..199362
/locus_tag="RB2501_04115"
/db_xref="GeneID:8454518"
CDS 197335..199362
/locus_tag="RB2501_04115"
/note="catalyzes the formation of
4-imidazolone-5-propanoate from urocanate during histidine
metabolism"
/codon_start=1
/transl_table=11
/product="urocanate hydratase"
/protein_id="YP_003193832.1"
/db_xref="GI:260060752"
/db_xref="GeneID:8454518"
/translation="MKTNTPNTLTDFQKAIRAGIPDTLPPPRERNPEVPHAPVRKDIL
DPEEKKLALRNALRYFPSEWHAELAPEFAGELRQYGRIYMYRFRPEYRMVARPIDAYP
AKIPEAAAIMLMIQNNLDPEVAQHPDELITYGGNGAVFQNWAQYLLTMQYLSEMTEAQ
TLHMYSGHPMGLFPSSPDAPRVVVTNGMMIPNYSRPDDWERFNALGVTQYGQMTAGSY
MYIGPQGIVHGTTITVLNAFRRVLPEATDFAGRVFLTAGLGGMSGAQPKAGNIAGCVT
VCAEVNPAAARKRHQQGWVDELLEDLDALAARTRQAIAGREVVSLAYLGNVVDVWERF
ADEDIPVTLGSDQTSLHNPWAGGYYPAGMSFEAANRMMAEEPEKFREKVRESLRRHVT
AINRHTQKGTYFFDYGNAFLLEAYRAGADIQGADGKEFRYPSYVQDILGPLCFDFGFG
PFRWVCTSGNPEDLRITDQIAREVMEAQLQDAPESIRGQLRDNIRWISRAEENALVVG
SQARILYADAEGRIAIARAFNEAIADGRLQAPVVLGRDHHDVSGTDSPFRETSNIYDG
SRFTADMAIHNVIGDSFRGATWVSIHNGGGVGWGEVVNGGFGLVLDGTPAAEKRLANM
LFFDVNNGIARRSWARNPEAMQALNREIGRSPGLSVRLPQLVDEAILNDLF"
misc_feature 197578..199332
/locus_tag="RB2501_04115"
/note="urocanate hydratase; Provisional; Region: PRK05414"
/db_xref="CDD:180062"
gene 199376..200344
/locus_tag="RB2501_04120"
/db_xref="GeneID:8454519"
CDS 199376..200344
/locus_tag="RB2501_04120"
/codon_start=1
/transl_table=11
/product="formiminoglutamase"
/protein_id="YP_003193833.1"
/db_xref="GI:260060753"
/db_xref="GeneID:8454519"
/translation="MNALYHLCEPALYTGRESTSRAYLHENVRALDLRGSLARTEERI
PALFGYACDEGVRRNLGRPGAAEGPRALRKGLGKYPWQVGAPGHLADAGDIRLEDDNL
EGAQAAYAEGVSKLLEVGYLPMGIGGGHDIAFAHYKGIRNHLGPGKHLGIVNFDAHFD
LRSPGDAPHSGSPFFQVARTCQQEGLDFHYACIGVRRDANPQVLWDRAREFSVCTIER
ESLTPDQLSGHCRTLRKFLKPLDAVYLTIDLDGFSSAYAPGVSAASPMGYAPMEIAPL
LDVVLNSGKLIGLDIAELNPAHDQDGQTVALAGSLVHRILHFPGLF"
misc_feature 199511..200320
/locus_tag="RB2501_04120"
/note="Formimidoylglutamase or HutE; Region:
Formimidoylglutamase; cd09988"
/db_xref="CDD:212514"
misc_feature order(199763..199765,199841..199843,199847..199855,
199883..199888,200117..200119,200123..200125,
200252..200254)
/locus_tag="RB2501_04120"
/note="putative active site [active]"
/db_xref="CDD:212514"
misc_feature order(199763..199765,199841..199843,199847..199849,
199853..199855,200117..200119,200123..200125)
/locus_tag="RB2501_04120"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:212514"
gene complement(200353..201510)
/locus_tag="RB2501_04125"
/db_xref="GeneID:8454520"
CDS complement(200353..201510)
/locus_tag="RB2501_04125"
/codon_start=1
/transl_table=11
/product="homogentisate 1,2-dioxygenase"
/protein_id="YP_003193834.1"
/db_xref="GI:260060754"
/db_xref="GeneID:8454520"
/translation="MPLYHKLGKIPHKRHTTFRKDDGSLHYEQLFGTIGFDGMSSLLY
HLHRPTQVKSIDKTLDVAPRAAVSKHIQSRLLKGLELPPKDDYLDSRTVVLFNRDVHI
GLAAPRNSQTGYFYKNADADELLFVHQGSGVLKTFLGEIPFEYGDYLLIPRGMIYQIH
FDGPDNRLFTVESYHPIYTPKRYRNWFGQHLEHSPYCERDFKLPQNLQTHDEKGEFLI
KIKKEGQLHHLVYATHPFDVVGWDGYNFPYGFSIHDFEPITGRVHQPPPVHQTFETGA
FVVCSFVPRLYDYHPESIPAPYNHSNIDSDEVLYYVDGDFMSRKGIDRGYISLHPAGI
PHGPHPGTYEASIGKKGTEELAVMVDTFKPLQLTQAALDLDDGKYYQSWLE"
misc_feature complement(200419..201510)
/locus_tag="RB2501_04125"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:212615"
gene complement(201618..201758)
/locus_tag="RB2501_04130"
/db_xref="GeneID:8454521"
CDS complement(201618..201758)
/locus_tag="RB2501_04130"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193835.1"
/db_xref="GI:260060755"
/db_xref="GeneID:8454521"
/translation="MQVGGNFLPLSNERLSDEGGFFCWYPPPAARPGLPDPFPVKSSL
PG"
gene complement(201806..203110)
/locus_tag="RB2501_04135"
/db_xref="GeneID:8454522"
CDS complement(201806..203110)
/locus_tag="RB2501_04135"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase"
/protein_id="YP_003193836.1"
/db_xref="GI:260060756"
/db_xref="GeneID:8454522"
/translation="MNIPKTEYPRIVLVGGGFAGIALAKRMKGLPVQLVVIDRQNYHN
FQPLLYQVSTGGLEPDSIAYPIRKILKRLDNMYFRWAEAESVDPARGVLRTDKGEITY
DYLILATGTRTNYFGNDQMRDFALPMKTIPQALNIRSLALQNLEEAEYTEDQAERRAL
MNFCIIGAGPTGVELAGAFAELKRHVFPRDYKHLAVDEMEINLFEGADRVLPPMSETA
SRKSREFLESLGVRIHLDTFVDTYDGRLLTTKDRREFRTANCIWTAGVTGALLPGFPE
GSTDSRTGRLLVDELNRVRGYGSVFAIGDIALMRTDDYPEGHPQMAQPALQQGAHLAD
NLERLLKGREMQPFNYKDKGSMATIGRNKAVVDLPGYQFGGFAAWFIWMFIHLMSLVG
FRNKVVVFFNWVYNYINYDKAARLIVRPFTKKKRKETQYAGK"
misc_feature complement(201887..203086)
/locus_tag="RB2501_04135"
/note="NADH dehydrogenase, FAD-containing subunit [Energy
production and conversion]; Region: Ndh; COG1252"
/db_xref="CDD:31444"
misc_feature complement(202358..202618)
/locus_tag="RB2501_04135"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
gene complement(203204..203962)
/locus_tag="RB2501_04140"
/db_xref="GeneID:8454523"
CDS complement(203204..203962)
/locus_tag="RB2501_04140"
/codon_start=1
/transl_table=11
/product="transcriptional regulatory protein"
/protein_id="YP_003193837.1"
/db_xref="GI:260060757"
/db_xref="GeneID:8454523"
/translation="MLINISFRDSLFFATFIFMEEEIGRSRCENCIVRKFNSLKAMSK
EELKAVSDSKVSRKIKKGEIIFDEGEKLAGVYCVRDGVSKLSKLSENGKDQIVKLASK
GQVLGQRSVVAEESANLSATAVNDMEICFIPREAITDTLHKNPEFSYEVLQTMAHDLR
EADDVIVNMSQKSVKQRIAQALLYLRENFGEDGEGYLLLVLSREDIASVVGTATESCI
RMLSELRKEGLIKTSGKRLSITDARKLKSLADGF"
misc_feature complement(203234..203869)
/locus_tag="RB2501_04140"
/note="cAMP-binding proteins - catabolite gene activator
and regulatory subunit of cAMP-dependent protein kinases
[Signal transduction mechanisms]; Region: Crp; COG0664"
/db_xref="CDD:31008"
misc_feature complement(203507..203848)
/locus_tag="RB2501_04140"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
cd00038"
/db_xref="CDD:28920"
misc_feature complement(order(203606..203614,203639..203644))
/locus_tag="RB2501_04140"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:28920"
misc_feature complement(order(203522..203530,203540..203548))
/locus_tag="RB2501_04140"
/note="flexible hinge region; other site"
/db_xref="CDD:28920"
misc_feature complement(203255..203443)
/locus_tag="RB2501_04140"
/note="helix_turn_helix, cAMP Regulatory protein
C-terminus; DNA binding domain of prokaryotic regulatory
proteins belonging to the catabolite activator protein
family; Region: HTH_CRP; cd00092"
/db_xref="CDD:28976"
misc_feature complement(203429..203434)
/locus_tag="RB2501_04140"
/note="putative switch regulator; other site"
/db_xref="CDD:28976"
misc_feature complement(order(203324..203326,203351..203359,
203363..203365))
/locus_tag="RB2501_04140"
/note="non-specific DNA interactions [nucleotide binding];
other site"
/db_xref="CDD:28976"
misc_feature complement(203306..203326)
/locus_tag="RB2501_04140"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:28976"
misc_feature complement(order(203306..203308,203318..203323))
/locus_tag="RB2501_04140"
/note="sequence specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28976"
misc_feature complement(203318..203323)
/locus_tag="RB2501_04140"
/note="putative cAMP binding site [chemical binding];
other site"
/db_xref="CDD:28976"
gene 204035..206452
/locus_tag="RB2501_04145"
/db_xref="GeneID:8454524"
CDS 204035..206452
/locus_tag="RB2501_04145"
/codon_start=1
/transl_table=11
/product="cation-transporting P-type ATPase"
/protein_id="YP_003193838.1"
/db_xref="GI:260060758"
/db_xref="GeneID:8454524"
/translation="MSGPSCYHCGDPAGSDAVEFDGHTFCCRGCRTVYDLFQSHNLEY
YYELEQAAGKSPAAAEGAYDYLDDPEIAGRLLDFQDTRHQVISLSIPHIHCSSCIWIL
ENLHKLNPGVISSQVDFPRKKARIHFNPELLSLKALVRLLAAIGYEPSITLDDYSGGG
EKKDRTLTYQLAVAGFAFGNIMFLSFPEYFESGEYWLEKYKVLFRWLMFSFSVPVVFY
SGMGYLRTAWKGLRSGLVNIDLPIALGILTLFIRSTVEIIGDLGSGFFDSLAGLVFFL
LLGRFFQQRTYAHLSFERDYKSYFPIAVTRIGEDGKETNVPVYEVAPGDRLLIRNNSL
IPADAVLLSGTGQIDYSFVTGEARPVSKKAGDTLYAGGKQLQGPIEVRALREVSQSYL
TELWSDSAFSGEARGSFRNFTDRIGKRFTLAVLTIATLSAGIWLTIDPGRSLDVFTAV
LIIACPCAIALAAPFTLGNLLRIFGRNGFYAKDTNALERMAKTDTILFDKTGTISTTR
QNQITYTGIPLEPREALVLKNLLRASGHPLSQTLYRQLEPLGIVPLEHFREHLGQGLE
GGAEGHYFKVGSRGFVQDSEIPTGQVESAGAEVHVRTAAGYRGCFNIRNAYREGAAGL
FGRLAPRYKLAVLSGDNASEEEALEALLPPLTPAYFNQQPGDKLHFVRELQQNGRQVA
MVGDGLNDAGALALAEVGIAVSEDANLFTPACDAILDSRQFTRLDTFLGLTRKAMGII
RLSLALSLIYNAVGLWFAVTGRLEPVVAAILMPLSSISIVAFTTAATNWIGRKLDRSK
TEINARG"
misc_feature 204047..204274
/locus_tag="RB2501_04145"
/note="Putative metal-binding domain of cation transport
ATPase; Region: ATPase-cat_bd; pfam12156"
/db_xref="CDD:192946"
misc_feature 204290..206377
/locus_tag="RB2501_04145"
/note="Cation transport ATPase [Inorganic ion transport
and metabolism]; Region: ZntA; COG2217"
/db_xref="CDD:32399"
misc_feature 204293..>204427
/locus_tag="RB2501_04145"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:29471"
misc_feature order(204311..204319,204326..204328)
/locus_tag="RB2501_04145"
/note="metal-binding site [ion binding]"
/db_xref="CDD:29471"
misc_feature 204923..205501
/locus_tag="RB2501_04145"
/note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
/db_xref="CDD:201018"
gene 206513..206710
/locus_tag="RB2501_04150"
/db_xref="GeneID:8454525"
CDS 206513..206710
/locus_tag="RB2501_04150"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193839.1"
/db_xref="GI:260060759"
/db_xref="GeneID:8454525"
/translation="MSVIYLLLAISVTVALVFFVVFVISVRRGQYDDAYTPSVRMLFD
DELVTTGEPDKKENPSKPSNK"
misc_feature 206516..206650
/locus_tag="RB2501_04150"
/note="Cytochrome oxidase maturation protein cbb3-type;
Region: CcoS; pfam03597"
/db_xref="CDD:202697"
gene 206720..208921
/locus_tag="RB2501_04155"
/db_xref="GeneID:8454526"
CDS 206720..208921
/locus_tag="RB2501_04155"
/note="CcoN/CcoO FixN/FixO"
/codon_start=1
/transl_table=11
/product="bifunctional cbb3-type cytochrome c oxidase
subunit I/II"
/protein_id="YP_003193840.1"
/db_xref="GI:260060760"
/db_xref="GeneID:8454526"
/translation="MEVEQFKYDNKIVQKFLYATMLWGIVGMLVGLLLAFMFLFPNLT
DGISWLSFGRLRPLHTNAVIFAFVGNAIFAGIYYSTQRLLKARMYSDALSKINFWGWQ
LIIVSAVLTLPLGYTTSKEYAELEWPIDIAITLVWVVFAWNFIGTVLKRRQRHLYVAI
WFYLATIVTVAVLHIFNSLELPVSALKSYSVYAGVQDALVQWWYGHNAVAFFLTTPFL
GLMYYFVPKAANRPIYSYRLSIVHFWSLIFIYIWAGPHHLLYTSLPDWAQNLGVTFSV
MLIAPSWGGMINGLLTLRGAWDKVRTSPVLKFMVVAITGYGMATFEGPMLSLKNINAI
AHFSDWIIAHVHVGALAWNGFLAFGMVYWMVPRLYKTDLFSVKLANFHFWIGTLGIVL
YALPMYVAGFTQALMWKDFNPDGTLVYGNFLETVQEIMPMYWMRAIGGTLYLVGVFVM
LYNIAVTIRGGEAVSDELAEAAPLKRVSRKRLAGETFHTWLERKPVQLTILATIAILI
GGAVQIIPTLLVKSNIPTITSVTPYTPLELEGRDLYIREGCVSCHSQMVRPFRSEVER
YGEYAKAGEFVYDHPFLWGSKRTGPDLLRVGGKYSDNWHLNHFYDPQSTSAGSIMPAY
QWLIRNEHDRSDIQDKMRAMVTLGVPYTEADIEGAFESMEAQAAQIEQNLYTDPEFAR
SYENQKQNAQENGEPFVEMRNREIVAMIAYLQRLGTDIKIEQGSEVASEKP"
misc_feature 206720..208912
/locus_tag="RB2501_04155"
/note="putative bifunctional cbb3-type cytochrome c
oxidase subunit I/II; Provisional; Region: PRK14485"
/db_xref="CDD:184703"
misc_feature 206726..208093
/locus_tag="RB2501_04155"
/note="Cytochrome cbb3 oxidase subunit I. Cytochrome cbb3
oxidase, the terminal oxidase in the respiratory chains of
proteobacteria, is a multi-chain transmembrane protein
located in the cell membrane. Like other cytochrome
oxidases, it catalyzes the reduction...; Region:
cbb3_Oxidase_I; cd01661"
/db_xref="CDD:29932"
misc_feature order(206762..206764,207755..207757,207767..207769,
207896..207898,208010..208012)
/locus_tag="RB2501_04155"
/note="Low-spin heme binding site [chemical binding];
other site"
/db_xref="CDD:29932"
misc_feature order(207296..207298,207311..207316,207713..207715,
207725..207730,207941..207943)
/locus_tag="RB2501_04155"
/note="Putative water exit pathway; other site"
/db_xref="CDD:29932"
misc_feature order(207335..207337,207485..207490,207749..207751)
/locus_tag="RB2501_04155"
/note="Binuclear center (active site) [active]"
/db_xref="CDD:29932"
misc_feature order(207488..207490,207725..207730,207941..207946)
/locus_tag="RB2501_04155"
/note="Putative proton exit pathway; other site"
/db_xref="CDD:29932"
misc_feature 208181..208882
/locus_tag="RB2501_04155"
/note="Cytochrome C oxidase, mono-heme subunit/FixO;
Region: FixO; pfam02433"
/db_xref="CDD:111339"
gene 208925..209116
/locus_tag="RB2501_04160"
/db_xref="GeneID:8454527"
CDS 208925..209116
/locus_tag="RB2501_04160"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193841.1"
/db_xref="GI:260060761"
/db_xref="GeneID:8454527"
/translation="MMKFVKNYMETIDGVANYPMISLLIFFVFFILLFWWVLTASKQH
VKEMSELPLEDEQPKPTEK"
gene 209113..210090
/locus_tag="RB2501_04165"
/db_xref="GeneID:8454528"
CDS 209113..210090
/locus_tag="RB2501_04165"
/codon_start=1
/transl_table=11
/product="cytochrome-c oxidase fixP chain"
/protein_id="YP_003193842.1"
/db_xref="GI:260060762"
/db_xref="GeneID:8454528"
/translation="MRQSTPWWIRIPVLFFLIFGLMEYFIDSGDQPAFIAQPAAALFL
VVVLVLLIAVELMMRGIENVLYRTLDPAARKRYLEMKARPRRWEWGMRVYRNLLGSRP
IEEEGEIILDHNYDGIRELDNRLPPWWVYSFYITIIFSVIYMFRYHVFSGDDQQTEFE
KEMVAAREAVAEYKRTAVDLVDASTVELLTEPADLAAGEAIFTGNCAVCHKVDGGGSI
GPNLTDDYWILGGGIRNIFNTISEGGRDGKGMVAWKTNLKPGEIAQVASYIVGLHGTN
PPDAKAPEGELYVDPDAPVDRVEVETDSTGAEVIIETDTPNPLESESDQ"
misc_feature 209590..>209784
/locus_tag="RB2501_04165"
/note="Cytochrome c; Region: Cytochrom_C; cl11414"
/db_xref="CDD:212313"
misc_feature 209689..209919
/locus_tag="RB2501_04165"
/note="Cytochrome C oxidase, cbb3-type, subunit III;
Region: Cytochrome_CBB3; pfam13442"
/db_xref="CDD:205620"
gene 210135..211550
/locus_tag="RB2501_04170"
/db_xref="GeneID:8454529"
CDS 210135..211550
/locus_tag="RB2501_04170"
/codon_start=1
/transl_table=11
/product="iron-sulfur cluster-binding protein"
/protein_id="YP_003193843.1"
/db_xref="GI:260060763"
/db_xref="GeneID:8454529"
/translation="MSKDERFRDSIGTIDEAGKRAWVFPKKPSGRFYTYRKWVSYALL
LILVASPFIYVNGNQFMLFNVLERRFNIFGLPFWPQDFHLVVISMIIGVIFIALFTTA
FGRIFCGWMCPQTIFMEMVFRRIEYWIDGDRGAQMRLDRQPWNPVKLRKRLTKWAVFF
LISFGIANVFLAYLIGSDTLLRYVQDGPAAHLGTLVALLIFTGVFYFVFAWFREQVCI
IACPYGRMQGVLLDEKSVVVAYDYKRGEAEKGRKKFRKGEDRQALGYGDCIDCLQCVH
VCPTGIDIRNGTQLECVNCTACIDECDTIMEKVNLPKGLIRYASEDEIARKKKFRFTP
RMKGYAAVLTILTGVFIGMLFLRNDLEASILRLPGQLYQRKENQVISNVYTYKLINKT
TREIPDVHFRLLSHTGTITFVKGDGFAVPAQELFEGTLFIDIPETELNGDQDKLRIGV
YSGKELIETTATRFLAPRTYK"
misc_feature 210228..211532
/locus_tag="RB2501_04170"
/note="cytochrome c oxidase accessory protein FixG;
Region: ccoG_rdxA_fixG; TIGR02745"
/db_xref="CDD:162996"
misc_feature 210393..210509
/locus_tag="RB2501_04170"
/note="4Fe-4S binding domain; Region: Fer4_5; pfam12801"
/db_xref="CDD:205081"
misc_feature <210804..>211118
/locus_tag="RB2501_04170"
/note="The HCP family of iron-sulfur proteins includes
hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
and carbon monoxide dehydrogenase (CODH), all of which
contain [Fe4-S4] metal clusters at their active sites.
These proteins have a conserved...; Region: HCP_like;
cl14655"
/db_xref="CDD:187409"
misc_feature 211182..211535
/locus_tag="RB2501_04170"
/note="Ubp3 associated protein Bre5; Region: Bre5;
pfam11614"
/db_xref="CDD:204690"
gene 211557..212003
/locus_tag="RB2501_04175"
/db_xref="GeneID:8454530"
CDS 211557..212003
/locus_tag="RB2501_04175"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193844.1"
/db_xref="GI:260060764"
/db_xref="GeneID:8454530"
/translation="MKINWGTGIVIAFIGFIGFILYFVIQASADPRAEHDMVTDSYYK
KELEYQQELNASANLKASGGGVTVRRLPDGLAIRLPERMDPAAIRGTIGMYRPSDDNL
DFEWPIQPGDSLQRIPSDRLVEGRWDLRIDWEYHGEKYLYRTRLTY"
misc_feature <211662..211997
/locus_tag="RB2501_04175"
/note="FixH; Region: FixH; pfam05751"
/db_xref="CDD:147738"
gene 212098..212772
/locus_tag="RB2501_04180"
/db_xref="GeneID:8454531"
CDS 212098..212772
/locus_tag="RB2501_04180"
/codon_start=1
/transl_table=11
/product="heavy-metal-associated domain/membrane-bounded
cytochrome biogenesis cycZ-like domain-containing protein"
/protein_id="YP_003193845.1"
/db_xref="GI:260060765"
/db_xref="GeneID:8454531"
/translation="MGSLHCIGMCGPIALMLPLDRESAGRRYLQLGLYHGGRLLAYGI
IGGVFGLVGRGLYLFGFQQKLSIFLGVLMILAVLLPWKRFQNRWVVRPVYRAVGRLKE
ALGGQLKKRTPDTFLTIGFLNGFLPCGLVYMAVIGAMAGGTVLQGVAYMVVFGLGTLP
LMSAAALFGKFLKGRWAGRLRRAIPVLVVLIGMLFILRGMGLGIPYVSPRPPGQGVAA
GVECHP"
misc_feature 212098..212679
/locus_tag="RB2501_04180"
/note="Family description; Region: DsbD_2; pfam13386"
/db_xref="CDD:205564"
gene 212846..214234
/locus_tag="RB2501_04185"
/db_xref="GeneID:8454532"
CDS 212846..214234
/locus_tag="RB2501_04185"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193846.1"
/db_xref="GI:260060766"
/db_xref="GeneID:8454532"
/translation="MKNPSSSRRSFLKKTTLATAGLTAGPYILRAENRGSAMERNYEA
FSPNDQVQLGLIGCGIQGIFDTRSALEVAGVQLVAVCDLYSGRLTRAEELWGEGLFKT
RDYRELLAREDIDAVIVATPDHWHKQITIDALNAGKAVYCEKPMVQQFEEGHEIIAAQ
KRTGVVCQVGSQGMSSLGNEKARELYEAGAIGEIVMLDMYNDRYSAEGAWQYPIPPDA
NPQTVDFDTFLGRAPEVPYDNTRFFRWRNYRDYGTGVAGDLFVHAFSTLNYILSSNGP
VRALSTGGLRFWNDGRDVPDVTLTFYDYPKTDTHAAFNASFRVNFIAGGGGGGGFRLV
GTEGSMEVGQNSVRLQRTKLDLVPGGYSMIAQTEANQALLQAAYEEALGNQRSANLNL
GETVYEAPRGYKGGHYDHFYNFFDAVRGNRSVIQDPTFGLRAAGAALLANESYYTSRP
VRWDPDAMQIVG"
misc_feature 213065..>213877
/locus_tag="RB2501_04185"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature 213065..213355
/locus_tag="RB2501_04185"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
gene complement(214264..214977)
/locus_tag="RB2501_04190"
/db_xref="GeneID:8454533"
CDS complement(214264..214977)
/locus_tag="RB2501_04190"
/codon_start=1
/transl_table=11
/product="universal stress protein"
/protein_id="YP_003193847.1"
/db_xref="GI:260060767"
/db_xref="GeneID:8454533"
/translation="MLELNYAMISSAESFHPEQMVLLLKAAEKRLEDFLDKPYLKGVG
ITPVIKHYKVFSEVNEVVERHNADLIVMGSHGSDGLRELFFGSNAEKVVRNAEVPVLV
VKKDRPDFQVDTFVFACDFREESLEVFREAQKIAGLFGASFRPVYINIPGDNFMSTRE
INEQISRFLNKAKAGLEVDIFNDYSVERGVLAYSEDVGADLIGVPTHGRKGLTHFFMG
SIGEDIANHSSIPVLTFRM"
misc_feature complement(214669..>214953)
/locus_tag="RB2501_04190"
/note="Usp: Universal stress protein family. The universal
stress protein Usp is a small cytoplasmic bacterial
protein whose expression is enhanced when the cell is
exposed to stress agents. Usp enhances the rate of cell
survival during prolonged exposure to...; Region:
USP_Like; cd00293"
/db_xref="CDD:30165"
misc_feature complement(order(214711..214722,214750..214755,
214759..214764))
/locus_tag="RB2501_04190"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30165"
misc_feature complement(214279..214638)
/locus_tag="RB2501_04190"
/note="Usp: Universal stress protein family. The universal
stress protein Usp is a small cytoplasmic bacterial
protein whose expression is enhanced when the cell is
exposed to stress agents. Usp enhances the rate of cell
survival during prolonged exposure to...; Region:
USP_Like; cd00293"
/db_xref="CDD:30165"
misc_feature complement(order(214315..214326,214354..214359,
214363..214368,214534..214536,214618..214626))
/locus_tag="RB2501_04190"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30165"
gene complement(215099..216457)
/locus_tag="RB2501_04195"
/db_xref="GeneID:8454534"
CDS complement(215099..216457)
/locus_tag="RB2501_04195"
/note="catalyzes the oxygen-independent formation of
protoporphyrinogen-IX from coproporphyrinogen-III"
/codon_start=1
/transl_table=11
/product="coproporphyrinogen III oxidase"
/protein_id="YP_003193848.1"
/db_xref="GI:260060768"
/db_xref="GeneID:8454534"
/translation="MCTLSKKYNVPGPRYTSYPTVPYWERDGFSGSNWKVAAKRSFDQ
SNAASGISVYIHLPFCESLCTFCGCLKRITKRHSVEDPYIRAVLKEWKLYREIFGKRP
VIRTLHLGGGTPTFFSPENLQLLVRGILRFADRAPDWEFSFEGHPSNTTREHLQVLYD
LGFRRVSYGVQDYNPGVQEAINRKQSFEEVAEITRLSREIGYTSVGHDIIYGLPRQTA
DHVRDTLGKTLDIRPDRIAFYSYAHVPWMKGNGQRGFRDSDLPGAAGKLRQFALGEEI
LGKGGYAAVGMDHYALESDVLYRAMRSGQLHRNFMGYTETATQLTIGLGVSSISDSWD
AFAQNVKSVEEYQHLVDCGVLPLMRGHQLTLADRQVRRHILNLMCRNETQWNLGLPAD
VREAVVGRLVQPEADGLVELLPGGIRITQRGRRFMRNICMAFDLRLHEKSPETRLFSM
TV"
misc_feature complement(215102..216448)
/locus_tag="RB2501_04195"
/note="coproporphyrinogen III oxidase; Provisional;
Region: PRK09249"
/db_xref="CDD:181727"
misc_feature complement(215186..215371)
/locus_tag="RB2501_04195"
/note="HemN C-terminal domain; Region: HemN_C; pfam06969"
/db_xref="CDD:203555"
gene complement(216564..217841)
/locus_tag="RB2501_04200"
/db_xref="GeneID:8454535"
CDS complement(216564..217841)
/locus_tag="RB2501_04200"
/codon_start=1
/transl_table=11
/product="Gfo/Idh/MocA family oxidoreductase"
/protein_id="YP_003193849.1"
/db_xref="GI:260060769"
/db_xref="GeneID:8454535"
/translation="MTGPPRKDILRIGLIGVGLRGTNHLRNLLLRDDVRVTALCDIDP
GRLEPAAGMVVEAGQEPPATFGEHEHSYRDLLDLESVDAVVISTPWLWHTPMAVDAMK
AGKYTGLEVSAATTLEECWDLVDTHEATGTHLMLLENVNYRRDVLAVLNMVRQDVFGE
LVHFRCGYQHDLREVKFNDGKQPYGGGVEFGEKAISEARWRTLHSLRRNADVYPTHGL
GPVAAMADINRGNRLVSLTSTASKGIGLHNHIVARGGADHPNASLKFQQGDVITTTLT
TARGETIIVTHDCNLPRPYSLGFRVQGANGLWEVDGDRIYIEGESEPHRWDAAGPWLE
RYDHPLWKKYGEYASGSGHGGMDFFVLHAFVQSARLGVAPPIDAYDAAAWSSVTPLSE
QSIAGRGEPQDVPDFTRGQWIRRKPYDWIKDTY"
misc_feature complement(216699..217733)
/locus_tag="RB2501_04200"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature complement(217437..>217733)
/locus_tag="RB2501_04200"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
gene 218028..218912
/locus_tag="RB2501_04205"
/db_xref="GeneID:8454536"
CDS 218028..218912
/locus_tag="RB2501_04205"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193850.1"
/db_xref="GI:260060770"
/db_xref="GeneID:8454536"
/translation="MTLLLMAAGRGSRYGKLKQFDDLGPNGEFLMEFSIHDALANGFD
HIVVITQKDNVDFLRDYLKERLPGSVSLDVLAQELTDLPEGASFSGERPKPWGTAHAV
WTARDVIRGPFAVINADDYYGQPAYARAAEFMKATEGSNTFGLVAYTLRDTLSPHGSV
SRGVCSREGKYLRSVDERVEIQEVDGQIRDADSGLEFDGNELVSMNFWVCHPSIFQQI
ETDFREFLSGSDDPSKGEIYLPFVIQDMLSEEVVQVEVIPADSPWFGVTYAADKEQAV
SELADLSDKGRYPSPLWG"
misc_feature 218037..218852
/locus_tag="RB2501_04205"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:212311"
misc_feature order(218043..218045,218049..218051,218172..218174,
218376..218378,218382..218384)
/locus_tag="RB2501_04205"
/note="active site"
/db_xref="CDD:132997"
gene 218985..219995
/locus_tag="RB2501_04210"
/db_xref="GeneID:8454537"
CDS 218985..219995
/locus_tag="RB2501_04210"
/codon_start=1
/transl_table=11
/product="desulfatase possibly for mucin"
/protein_id="YP_003193851.1"
/db_xref="GI:260060771"
/db_xref="GeneID:8454537"
/translation="MRELQPISEGLINDTFRVSIPNSDGYVLQRINTEVFPDPDALME
NLERILPKLRGDGYRQLELIRTTDGRAWYQNAGSGAWRLYKFIPGSRTISDAQQPGVA
RETGRILGRFHQLLQDTDPGMLHPVLPGFHDLGLRMQQLNAAETQGLPDRVARGRKLA
EQARVLASQMEAVRLDTLPTRVCHNDPKLSNILFSTGLRPKALCLIDLDTLMPGALLF
DFGDAGRTLINSLAEEQPEDGTNEIDWRAYREFCQGFAAACPELSAAESASLPYGLLL
MPLLHGARALADYYLGDLHYKVSYETQNLVRARNLLRVAGTAGEEINRLRETWVAARE
ET"
misc_feature 218991..219737
/locus_tag="RB2501_04210"
/note="Phosphotransferase enzyme family; Region: APH;
pfam01636"
/db_xref="CDD:201896"
misc_feature order(219015..219017,219027..219029,219063..219065,
219072..219074,219165..219167,219234..219245,
219540..219542,219552..219557,219561..219563,
219600..219605)
/locus_tag="RB2501_04210"
/note="active site"
/db_xref="CDD:88612"
misc_feature order(219015..219017,219540..219542)
/locus_tag="RB2501_04210"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:88612"
misc_feature 219021..219782
/locus_tag="RB2501_04210"
/note="Protein Kinases, catalytic domain; Region:
PKc_like; cl09925"
/db_xref="CDD:213116"
misc_feature order(219027..219029,219063..219065,219072..219074,
219165..219167,219234..219245,219540..219542,
219552..219557,219561..219563,219600..219605)
/locus_tag="RB2501_04210"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:88612"
gene complement(220108..221286)
/locus_tag="RB2501_04215"
/db_xref="GeneID:8454538"
CDS complement(220108..221286)
/locus_tag="RB2501_04215"
/codon_start=1
/transl_table=11
/product="acyl-Coa dehydrogenase-like protein"
/protein_id="YP_003193852.1"
/db_xref="GI:260060772"
/db_xref="GeneID:8454538"
/translation="MKPDLFEAPDYYLLDDLLDEEHKLVRDATRSWVKRAVSPIIEEY
AQKAEFPEEILAGLAEIGAFGPYIPEQYGGAGLDQISYGLIMQEIERGDSGVRSTASV
QSSLVMYPIFAYGNEAQREKYLPKLASGEWMGCFGLTEPDHGSNPAGMVTNFKDAGDH
YLLNGAKLWISNAPFADIAIVWAKNEEGRIHGLIVERGMEGFSTPETHNKWSLRASAT
GELIFDNVKVPKDNLLEGKSGLGAPLGCLDSARYGIAWGAIGAAMDCYDTALRYAKER
VQFGKPIAGTQLQQKKLAEMITEITKAQLLAFRLGQLRNEGRATTAQISMAKRNNVEM
ALNIAREARQVLGGMGITGEYSIMRHMMNLESVITYEGTHDIHLLITGADITGISAFK
"
misc_feature complement(220111..221229)
/locus_tag="RB2501_04215"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:32143"
misc_feature complement(220114..221229)
/locus_tag="RB2501_04215"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:209100"
misc_feature complement(order(220162..220164,220168..220170,
220174..220182,220774..220776,220780..220782,
220873..220875,220879..220881,220969..220971))
/locus_tag="RB2501_04215"
/note="active site"
/db_xref="CDD:173838"
gene complement(221345..222058)
/locus_tag="RB2501_04220"
/db_xref="GeneID:8454539"
CDS complement(221345..222058)
/locus_tag="RB2501_04220"
/codon_start=1
/transl_table=11
/product="RNA methyltransferase"
/protein_id="YP_003193853.1"
/db_xref="GI:260060773"
/db_xref="GeneID:8454539"
/translation="MSDVFHFKQFQVAQQGAAMKVGTDSVLLGAWAPLPESPGQLLDV
GSGNGLLGLMLAQRCPSGDIEAVEVDPGAYVCCVENFEASPWADRLFCYHCSWEEFVA
ESAGPYDMIISNPPFHPEQVSSHEPARERARREASLPFNSLLEGVDRLLAEQGLFSVV
VPFASEADFTKLAAALGLYPQKVLRVRGRAGAPVKRSLMAFGRTQVRHTPGELVIEEA
RHRYTDDYKNLTRDFYLKM"
misc_feature complement(221348..222058)
/locus_tag="RB2501_04220"
/note="Predicted O-methyltransferase [General function
prediction only]; Region: COG4123"
/db_xref="CDD:33880"
misc_feature complement(<221702..221938)
/locus_tag="RB2501_04220"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(221717..221719,221768..221776,
221852..221857,221909..221929))
/locus_tag="RB2501_04220"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(222069..223649)
/locus_tag="RB2501_04225"
/db_xref="GeneID:8454540"
CDS complement(222069..223649)
/locus_tag="RB2501_04225"
/codon_start=1
/transl_table=11
/product="arylsulfatase A"
/protein_id="YP_003193854.1"
/db_xref="GI:260060774"
/db_xref="GeneID:8454540"
/translation="MIQQDILISIFPKQFLIQSMKTTSTPLSKFLQKFSRWCQRCVRY
PLLAIILLGVSCRETVKSEFAAADRADRPPNIVIIFTDDQGYSDVGVYGARDIPTPNL
DAMAADGLLLTNFYAAQPVCSASRAGLLTGCYPNRVGIHNALMPNSPVGLNPAEETLA
ELLRQQGYRTGIFGKWHLGDHPDFLPTRHGFDEFFGIPYSNDMWPLHPLQGPVFDFGP
LPLYEQERVVDTLEDQRLLTRQITERSVDFINRHKEEPFFLYVPHPQPHVPLFVSDAF
RGKSGRGLYGDVIMEIDWSVGQVLGALEDNGLTDDTWVIFTSDNGPWLAYGNHSGRAE
PLREGKGTNWEGGVREPCIMKFPGRLPRGKVLDEPLMAIDLLPTIASVTGSPQPGREI
DGKNAWGLLSGAEARGPQDAYYFYYRVNELQAVRDGDWKLVLPHNYRTMQGQEPGADG
LPGAYDYVDVTAPELYNLREDPGETNNLAERHPEVLAAISRKADSMRRRLGDALTGVK
GVENRPPGRVETGAGQEH"
misc_feature complement(222099..223442)
/locus_tag="RB2501_04225"
/note="Arylsulfatase A and related enzymes [Inorganic ion
transport and metabolism]; Region: AslA; COG3119"
/db_xref="CDD:32933"
misc_feature complement(222411..223430)
/locus_tag="RB2501_04225"
/note="Sulfatase; Region: Sulfatase; pfam00884"
/db_xref="CDD:201490"
gene 223740..226523
/locus_tag="RB2501_04230"
/db_xref="GeneID:8454541"
CDS 223740..226523
/locus_tag="RB2501_04230"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193855.1"
/db_xref="GI:260060775"
/db_xref="GeneID:8454541"
/translation="MMPLRFSGRTCVLLLAALALIPACSEKKQHPVDRVIGSFSDSLP
HIGLPPDADATDANWAGADLGPKPPVKPLYPEESAKHFLLPDGYRMEPVLTEPEIEQP
GAIAFDGNGRMYVLELRSYMLTADSDGELDPISRISRWEDRDHDGVYETGTVFVDSLV
FPRFVLPYGKDCILAMESNRDNVYRYTDTDGDGRADQKELFTNRFGRAGNVEHQQAFM
YYGMDNWLYSTVNAFRVRETAGGIIRQPTGYNHAQWGLTHDDDGKLWFLGGASGVPSY
FQFPIHYGNFEVPDELAEGFKVPWGAPVRIADMQGGMDQVRQPDGSLNEVTGSAGNDI
YRGDRLPRELYGELFYGEPVARIVRQVHPVVAEGLTTLHNAYQEEKSEFLRSTDPLFR
PVDLTTAPDGTLYVTDMYRGIIQEGQWVQPGSYLRARIEQYQLDKVIGLGRIWRLTHE
GIPRDKTRPRMLDQQPSELIQYLNHPNGWWRDKAQQLIVLSGDTSLGPRLEELLGSES
EGTNARIHALWCLEGLGLLQENHIRQLAASPQPRLRIQALRAGESLYLEGPAGLDATY
NRMMEDPVADVAIQAMLSAKFLGLENLESRIAAIADTSDIRGIRLVGEQILDQLEAGG
NNLADGDFSEEQLASLERGKAIYNELCVQCHGAGGIGKPAGKDQLMAPALASSLRVQG
HPRYALGAILHGLQGEIEGKQYAGGIMVGNAEQSDRWIADITSYIRVGLGNGASLVTE
ADAAAFRQATRGRQAPYSYPELLASIPRELKPTEAWKMEASHTQPVVIGGVASPRAAF
DFGGWTTGADQQVGMWYRIDFPEPIRLEEIQFDAPANGTVWAAAKKPAAYPRELSVQA
SQDGQTWKEITRVRPDSLEVAFKLPPTRLRALRLELTDVPDDPGIPWSMRQMRLYGQQ
ESQQSTHSKPETK"
misc_feature 223998..225092
/locus_tag="RB2501_04230"
/note="putative membrane-bound dehydrogenase domain;
Region: Piru_Ver_Nterm; TIGR02604"
/db_xref="CDD:162945"
misc_feature 225618..226001
/locus_tag="RB2501_04230"
/note="Cytochrome c; Region: Cytochrom_C; cl11414"
/db_xref="CDD:212313"
misc_feature <225651..225995
/locus_tag="RB2501_04230"
/note="Cytochrome c, mono- and diheme variants [Energy
production and conversion]; Region: CccA; COG2010"
/db_xref="CDD:32193"
misc_feature 226104..226457
/locus_tag="RB2501_04230"
/note="F5/8 type C domain; Region: F5_F8_type_C;
pfam00754"
/db_xref="CDD:201426"
gene 226520..227563
/locus_tag="RB2501_04235"
/db_xref="GeneID:8454542"
CDS 226520..227563
/locus_tag="RB2501_04235"
/codon_start=1
/transl_table=11
/product="16S rRNA-processing protein"
/protein_id="YP_003193856.1"
/db_xref="GI:260060776"
/db_xref="GeneID:8454542"
/translation="MKQEKKGLSRRKFIGTTALVGAGIGLGGSRLFAGPALIKNPGYP
ASVISGVQIGVITYSFRSMPDQSAEATLDYVKQCGIGAIELMGDPAESFAGKPENPVD
FRQYYRLRRAERDGGLSGDQQKELAELREASEAYNKEVAAWREQTSMEPFEELRRMYA
NEGVSIYAFKPRAFGADNTEAEMDWGVRAAKALGASHITLEHPDNDSHTQKLARIAAK
HGIFVAYHGHEQQTPTFWDTALKQSTFNSLNLDLGHYVAAGNADPLGIIRDKFYRIQS
MHLKDRQKPENGKGNVVWGSGDTPIREALQLMRENKYDFPGTIELEYDIPEGSDAVAE
VKKCLEFCREALS"
misc_feature 226967..227413
/locus_tag="RB2501_04235"
/note="Xylose isomerase-like TIM barrel; Region:
AP_endonuc_2; pfam01261"
/db_xref="CDD:201692"
gene complement(227602..228129)
/locus_tag="RB2501_04240"
/db_xref="GeneID:8454543"
CDS complement(227602..228129)
/locus_tag="RB2501_04240"
/codon_start=1
/transl_table=11
/product="16S rRNA-processing protein"
/protein_id="YP_003193857.1"
/db_xref="GI:260060777"
/db_xref="GeneID:8454543"
/translation="MRKEDCFYLGKIVSRHGFKGELLAKLDTDEPQLYENLESVFVSV
GNNLVPFFLRRCQLHKTRLLRLHFEDIDSEADATRILGSELYLPLQMLPPLEGNKFYY
HEVIGFRLNDARRGDVGEIRSVNDQGAQALFVADKDGREVLIPVTDDFIEKVDRDQRV
IHIRTPEGLLDLYLT"
misc_feature complement(227617..228129)
/locus_tag="RB2501_04240"
/note="16S rRNA-processing protein RimM; Provisional;
Region: rimM; PRK00122"
/db_xref="CDD:178881"
misc_feature complement(227866..228105)
/locus_tag="RB2501_04240"
/note="RimM N-terminal domain; Region: RimM; pfam01782"
/db_xref="CDD:201971"
gene complement(228142..228819)
/locus_tag="RB2501_04245"
/db_xref="GeneID:8454544"
CDS complement(228142..228819)
/locus_tag="RB2501_04245"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S16"
/protein_id="YP_003193858.1"
/db_xref="GI:260060778"
/db_xref="GeneID:8454544"
/translation="MRAKRDGRFLEKLGIYNPNTNPATIEIDVDQSVQWLNDGAQPSE
TARRILSYKGVLLKHHLMGGVRKGALTEEEAEKKFQAWLDEKEQKVSQKTEGLEKARE
EARAKALEAEREANEKRKAAAAEAEAPEAEETPETPEGESAAEEVEAVAAAGEPENEV
AEAEAPAAADDAAQEEAGEEKAEAAPAEKAEEAKAEEKAEEAPKAAAGDSEEKEEKKE
AAAGDKE"
misc_feature complement(228652..>228816)
/locus_tag="RB2501_04245"
/note="Ribosomal protein S16; Region: Ribosomal_S16;
cl00368"
/db_xref="CDD:212204"
gene 229190..229645
/locus_tag="RB2501_04250"
/db_xref="GeneID:8454545"
CDS 229190..229645
/locus_tag="RB2501_04250"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193859.1"
/db_xref="GI:260060779"
/db_xref="GeneID:8454545"
/translation="MKYTEKISNKLNELLEKTYDAEKGYKLAAEKVEVPAVKEFLNDK
VKQRYTFGHELKTEIREYGELPDKGGSFKGDLHRTWMNLTSTLTGNETERILEEVERG
EKASLEQYDEILDDKEMTLPPSTEQLLRSQRNAIQAALNTSKMYESIVS"
misc_feature 229205..229465
/locus_tag="RB2501_04250"
/note="Domain of unknown function (DUF2383); Region:
DUF2383; pfam09537"
/db_xref="CDD:204266"
gene 229859..234220
/locus_tag="RB2501_04255"
/db_xref="GeneID:8454546"
CDS 229859..234220
/locus_tag="RB2501_04255"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit alpha"
/protein_id="YP_003193860.1"
/db_xref="GI:260060780"
/db_xref="GeneID:8454546"
/translation="MYLIFDTETTGLPKRWDAPASDTDNWPRCIQIAWQLHDGEGRLV
EQYDALVRPDGFNIPYDAEQIHGISTDLAREEGLPLEEVLEAFRGALSRTQFLVGQNV
GFDINVMGAEFYRVADEDPLEKFPVLDTCTESTAELCQLPGGRGGKFKLPTLTELHLH
LFGEPFEEAHNATADVEATARCFLELLRRRQYSPEQLGVAPGYFEAFDRANPGTIAPI
GIAHKNLKKASRKLAEATAVDDPGLTRAEIRENVQALEGVPFAHLHNHSQFSVLQSTM
GIKDLVAAAAEYRMPAVALTDHANMMGAFHFVREVKAHNSNLTEEDRASGKRDLIPII
GCEFFVCEDRNNKSVKDYGYQVVMLAKNKKGYHNLAKMSSIAYTEGFYYVPRIDREVV
ERYKEDVIVLTGNLYGEVPSKVLNQGEKQAEEALLWWKEQFGEDLYVEVMRHGQEDED
RANQSLVALAKKHEVSLVATNNTYYRRKEDAEAHDILLCVKEGEKQATPIGRGRGYRF
GLPNQEYYFKSPEEMKELFRDLPESIQSIEGIIEKIEPFDLARDVLLPKFEIPEEFRV
AEDAADGGKRGENAYLRHITFQGAEKRYGEITEAIRERLDFELSTIENSGYPGYFLIV
EDFIREARNMGVSVGPGRGSAAGSVVAYCLGITNIDPLKYDLLFERFLNPDRVSMPDI
DIDFDDEGRSRVMDYVIDKYGANQVAQIITYGTMAAKSSIRDTARVLDLPLSEADRIA
KLIPNMSKLAKIFGQDEAELKKKFRSDDLAKVNELLNLSEGSDLEAQTVNMARVLEGS
LRNTGIHACGVIITPDDITNFVPVATAKDSDLYVTQFDNSVVENAGLLKMDFLGLKTL
TLIKDTVKIVKARHGIDLIPDDFPLDDAETYELFQRGETVGIFQYESPGMQKHLKDLK
PTVFDDLIAMNALYRPGPMEYIPSFIARKHGQEEITYDLPEMEEYLQETYGITVYQEQ
VMLLSQKLAGFSKGEADVLRKAMGKKIFALLQKLKPKFLDGGEANGHPRDVLEKIWKD
WEAFASYAFNKSHSTCYAYIAYQTAYLKAHYPAEYMAAVLSNNMNDIKQVTFFMEECR
RMGLDVLGPDVNESYYKFAVNKDNQVRFGMGAIKGVGRSAVETIVENRKANGPYQSIF
DLAKRIDLRAANKKAFENLALAGGFDSLGNAHRAQYFDCGTDGVSFLEKVIRFGARFQ
ESENSSQVSLFGGSSEVQIAEPEIPPCEEWGTMETLKREKEVVGIYISGHPLDDFKTE
IQAFCNTEIYALNDLSPYLNRELSLAGVITDVQHRVSKNGKGWAIFTLEDYSDAFEFK
IFGEEYLKFRHFLTINAFIYLKVFVREGWVNRETGKKGDPRLQYNQVLLLQDVMDAYA
KKLTIQLDIGQLHEKRIRELQDTLRSFKGQHHLNFVVYEMEEAIKVQLSSRKQKVHIS
SELLHSLRDQEVHYKLN"
misc_feature 229859..>230425
/locus_tag="RB2501_04255"
/note="DNA polymerase III, epsilon subunit and related
3'-5' exonucleases [DNA replication, recombination, and
repair]; Region: DnaQ; COG0847"
/db_xref="CDD:31188"
misc_feature 229865..230410
/locus_tag="RB2501_04255"
/note="DEDDh 3'-5' exonuclease domain family; Region:
DEDDh; cd06127"
/db_xref="CDD:176648"
misc_feature order(229874..229885,229889..229891,230156..230161,
230165..230173,230366..230368,230381..230383)
/locus_tag="RB2501_04255"
/note="active site"
/db_xref="CDD:176648"
misc_feature order(229874..229885,229889..229891,230156..230161,
230165..230170,230366..230368,230381..230383)
/locus_tag="RB2501_04255"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176648"
misc_feature order(229874..229876,229880..229882,230171..230173,
230366..230368,230381..230383)
/locus_tag="RB2501_04255"
/note="catalytic site [active]"
/db_xref="CDD:176648"
misc_feature 230633..234196
/locus_tag="RB2501_04255"
/note="DNA polymerase III subunit alpha; Validated;
Region: dnaE; PRK05673"
/db_xref="CDD:180192"
misc_feature 233717..233989
/locus_tag="RB2501_04255"
/note="DnaE_OBF: A subfamily of OB folds corresponding to
the C-terminal OB-fold nucleic acid binding domain of
Thermus aquaticus and Escherichia coli type C replicative
DNA polymerase III alpha subunit (DnaE). The DNA
polymerase holoenzyme of E. coli contains...; Region:
DnaE_OBF; cd04485"
/db_xref="CDD:72957"
misc_feature order(233729..233737,233777..233788,233792..233794,
233810..233818,233822..233824,233867..233869,
233903..233911,233939..233947)
/locus_tag="RB2501_04255"
/note="generic binding surface I; other site"
/db_xref="CDD:72957"
misc_feature order(233870..233872,233876..233878,233897..233899,
233960..233962)
/locus_tag="RB2501_04255"
/note="generic binding surface II; other site"
/db_xref="CDD:72957"
gene 234501..234716
/locus_tag="RB2501_04260"
/db_xref="GeneID:8454547"
CDS 234501..234716
/locus_tag="RB2501_04260"
/codon_start=1
/transl_table=11
/product="thioredoxin"
/protein_id="YP_003193861.1"
/db_xref="GI:260060781"
/db_xref="GeneID:8454547"
/translation="MVGPIIEELSQEYDGKAVVGKVDVDVHQEFAAKYGVRNIPTVLV
FKDGEIVNRQVGVSPKKVYAEAIDAAL"
misc_feature <234501..234704
/locus_tag="RB2501_04260"
/note="TRX family; composed of two groups: Group I, which
includes proteins that exclusively encode a TRX domain;
and Group II, which are composed of fusion proteins of TRX
and additional domains. Group I TRX is a small ancient
protein that alter the redox...; Region: TRX_family;
cd02947"
/db_xref="CDD:48496"
gene 234854..235786
/locus_tag="RB2501_04265"
/db_xref="GeneID:8454548"
CDS 234854..235786
/locus_tag="RB2501_04265"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193862.1"
/db_xref="GI:260060782"
/db_xref="GeneID:8454548"
/translation="MDLRSELHNAPLFENLGLLARQVVEGYISGIHKSPFHGYSAEFA
EHKVYNTGESTKHIDWKLFARTDKLYTKRYEEETNLRCHLILDSSASMYYPEVARLNL
DHLHKMGFAVLAAAALMELLKKQRDAVGLSVFADTYEYYAPEKGSERHYQMLLAKLND
LGLAGRRGEGTELHAHLHLIAEKLKRRSLVILFSDLFQDRVADEQLFEALRHLKYNKH
EVVLFHLADRATELDFDFENTPKRFQDVETGKHVDLYPETVRAAYRDALVRYVRSIKL
ICGQYDIKYVGVDVADPFARVLNAFLTERQRIAG"
misc_feature <234857..235552
/locus_tag="RB2501_04265"
/note="Uncharacterized conserved protein (some members
contain a von Willebrand factor type A (vWA) domain)
[General function prediction only]; Region: COG1721"
/db_xref="CDD:31907"
misc_feature 234977..>235141
/locus_tag="RB2501_04265"
/note="Protein of unknown function DUF58; Region: DUF58;
pfam01882"
/db_xref="CDD:202025"
gene 235919..235992
/locus_tag="RB2501_t10136"
/db_xref="GeneID:8454549"
tRNA 235919..235992
/locus_tag="RB2501_t10136"
/product="tRNA-Asp"
/codon_recognized="GAC"
/db_xref="GeneID:8454549"
gene 236228..236992
/locus_tag="RB2501_04270"
/db_xref="GeneID:8454550"
CDS 236228..236992
/locus_tag="RB2501_04270"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193863.1"
/db_xref="GI:260060783"
/db_xref="GeneID:8454550"
/translation="MKIQYCSDLHLEFPQNRKWLADHPLIPSGEILIIAGDTHYLGFD
FENLDLFKWVSDHYQQVYVIPGNHEYYGGFDLSLHQKPFQWELQPNVFLLNNQAIEIS
GIRFLFSTLWSHILPENIASVSAYVNDFHKIRMGDKILTIDYFNQLHAEAFDFITTSI
NDREGKTVVVTHHLPTPLCNSLEFEDSAINNAFVVDQTDFITRSNIDYWIYGHVHRNV
GNGIKLEGTTMLCNQLGYVHINEHHDFSRDSFIEIA"
misc_feature 236234..236935
/locus_tag="RB2501_04270"
/note="Microscilla MS158 and related proteins,
metallophosphatase domain; Region: MPP_MS158; cd07404"
/db_xref="CDD:163647"
misc_feature 236243..236875
/locus_tag="RB2501_04270"
/note="Calcineurin-like phosphoesterase; Region:
Metallophos; pfam00149"
/db_xref="CDD:201036"
misc_feature order(236249..236251,236255..236257,236336..236338,
236426..236431,236741..236743,236864..236866,
236870..236872)
/locus_tag="RB2501_04270"
/note="putative active site [active]"
/db_xref="CDD:163647"
misc_feature order(236249..236251,236255..236257,236336..236338,
236426..236428,236741..236743,236864..236866,
236870..236872)
/locus_tag="RB2501_04270"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:163647"
gene 237281..238741
/locus_tag="RB2501_04275"
/db_xref="GeneID:8454551"
CDS 237281..238741
/locus_tag="RB2501_04275"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193864.1"
/db_xref="GI:260060784"
/db_xref="GeneID:8454551"
/translation="MSDTIEFVELKKLKLDVNNPRFAELYSGSNKEEDLIQYLLYNEA
AEDVAKTIVSVGKFHADKALWVLKTDGGYLVKDGNRRCAAVKALRNPTKYELDLKKKI
IKTLPILVYDDPDELDKRILQEHTNNVFREWDRIAKALEVYRMFSKGDTIESMKDIDS
TPTQLIKLASFYYEAVKKGEEDLKKLLRRGRGKSGGKTIIFERLFRYSRQCGYYFQNK
PSYKIKVTDQACFDSYVEALIHYLQDYPEIRTQDIDSWKETFFLKLSPYGFTPCGKST
SSSTNGNSQSSSASSSSSSQTSQPSNQGSQTNPGTTQASSQTSSSTAQRGSTKTKPVY
KRKSLPRNLTKPINECYSLDKDKYCNAKTAMTRIALECALKYVVENTEYEPSKKLKDS
NYFRNVFFNPDGSKKPFTDFKKLKNLFTQLIDNTGVRKAFENFDMEKTHQTIHNYNVG
ATPSDSVALCDNLIPILEFLLQKEDDLISSLKKESL"
gene 238742..239701
/locus_tag="RB2501_04280"
/db_xref="GeneID:8454552"
CDS 238742..239701
/locus_tag="RB2501_04280"
/codon_start=1
/transl_table=11
/product="DNA-methyltransferase"
/protein_id="YP_003193865.1"
/db_xref="GI:260060785"
/db_xref="GeneID:8454552"
/translation="MNYSPLRYPGGKNKISAFIAKICLDNKVSGHYVEPYCGGAAVAL
FLLMEGFVEKITINDKDRSIYAFWHSLLNQTSKLCELIENTEVTIKEWQKQHDIQQNK
AKVDLLTLGFSTFFLNRTNRSGILNARPIGGLNQDGEYKMDCRYNKVDLINRIKAIAK
EKKNIRLYRKDALRLIDKIENESNLENTLFYFDPPYYLKGTSLYLNHYKTQNHKAVSE
RIKAIKNVKWIVSYDNVPEISSLYEGYTQKEYELVHSSNESKVGKEILFFSPNIERPR
FNNWNPLKFKIRRKENSNYLVYDQGQVIDGIRFLKASQIRLLV"
misc_feature 238742..239482
/locus_tag="RB2501_04280"
/note="Site-specific DNA methylase [DNA replication,
recombination, and repair]; Region: Dam; COG0338"
/db_xref="CDD:30686"
gene complement(239818..240864)
/locus_tag="RB2501_04285"
/db_xref="GeneID:8454553"
CDS complement(239818..240864)
/locus_tag="RB2501_04285"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193866.1"
/db_xref="GI:260060786"
/db_xref="GeneID:8454553"
/translation="MIAKQIKGKDFYGVLAYNEKKVEQGVGYVLDTNISYGKTVDMTQ
EFNIVRQLRPRLGKAVYHVSLNLPYEDTLTDKKFVALGNDYLKGMGFDDNQYIMYRHS
DQEHEHIHIIANRVKFSGELVSDSKDYERSERLVRKLELKYGLSHLENIQLTRKASIT
HQEIQKALRTGEAPIKLMLQQYLESAISNSKNITDFITELSKRKISPKFNISKSTGRV
TGISFKYDGIIYKGSTLGRKYSWNNIIKRIDYEQDRDRRIILETNISERRTGGAFEEN
SRTARGTKEKTKLAARLPDQTFEQSKSNMEKAQSVGLIPSTTDDSPWNAFTLELDDKK
RFKKKKRKRKHSRL"
misc_feature complement(240121..240846)
/locus_tag="RB2501_04285"
/note="Relaxase/Mobilisation nuclease domain; Region:
Relaxase; cl01584"
/db_xref="CDD:174650"
gene complement(240861..241202)
/locus_tag="RB2501_04290"
/db_xref="GeneID:8454554"
CDS complement(240861..241202)
/locus_tag="RB2501_04290"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193867.1"
/db_xref="GI:260060787"
/db_xref="GeneID:8454554"
/translation="MARPKKNIQDLKAIRLNVRVTVKEYLIVAENADTLGITIPDFIR
MKVTGRVLPRKRIPPDNRKLFIELGRIGNNLNQLTKKVHLGMNNSPILIEHLSAMRST
LDTLKANIVKP"
misc_feature complement(240882..241013)
/locus_tag="RB2501_04290"
/note="Bacterial mobilisation protein (MobC); Region:
MobC; pfam05713"
/db_xref="CDD:114439"
gene complement(241342..241632)
/locus_tag="RB2501_04295"
/db_xref="GeneID:8454555"
CDS complement(241342..241632)
/locus_tag="RB2501_04295"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193868.1"
/db_xref="GI:260060788"
/db_xref="GeneID:8454555"
/translation="MKRIFIMDDNGIREYVPADSIQKNIPPSTENPIEGKEVEDQLLT
IADLVKKFRVTRPTIYAWIEKGFLKKIPLGGRVLFHPDDIKALIEKMREASS"
misc_feature complement(241357..241509)
/locus_tag="RB2501_04295"
/note="Helix-turn-helix domain; Region: HTH_17; pfam12728"
/db_xref="CDD:205047"
gene complement(241629..241799)
/locus_tag="RB2501_04300"
/db_xref="GeneID:8454556"
CDS complement(241629..241799)
/locus_tag="RB2501_04300"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193869.1"
/db_xref="GI:260060789"
/db_xref="GeneID:8454556"
/translation="MEKLISFSIPILKFPYKIFLNISMSAVHQFMYGTHGKCRLMLLG
LFNKVNHKITLP"
gene 243217..244950
/locus_tag="RB2501_04305"
/db_xref="GeneID:8454557"
CDS 243217..244950
/locus_tag="RB2501_04305"
/codon_start=1
/transl_table=11
/product="transcriptional regulatory protein HypF"
/protein_id="YP_003193870.1"
/db_xref="GI:260060790"
/db_xref="GeneID:8454557"
/translation="MALWNNKGQKIEANTQLAIDKIIRFWEEGKIIAIKGIGGYLLTC
DATNPKAIQTLRKRKHRPSKPFACMYPNINKIEQDCYVDSTEQQMLTGEVAPILLLQL
RKKSVDIALSDIAPGLNQIGVMLPYTPLYLLLMQAFGKPIVATSGNLSNASIVFEDKK
IFSELSGIWDFALTNDREIVTPQDDSVMRFSPFKKQPILIRRSRGVAPNYFWPDIPTE
QKTILALGASQKSAFGLLFGGLFYLSQYLGDLTYLESAENLKRTIEHFVNLLNCKPEV
ILVDKHPDYYSTEYGKHLRDANRTKLVYIQHHFAHFAGVLSEHSLLQKSKRVLGIVWD
GAGYGNDRNIWGGEFLVYENKKIKRLSHIAYVPLILGDKMAGEPRLSALSHSGQNPAI
LPLLKDKFSTKEWKIYQRLLDKTPPLKTSSMGRLFDAVACLLGIMDTQTYEGEAALRL
ETMAQTYFDRHEDTLDSGYDTQISYLDGISTMPIIEGVVKDLNNGTAKDEIAFKFHYS
LVKMVEEIALENTIEKIAFSGGVFQNGLLVDLLMMHLENRFQLYFHQQVSPNDEGIAL
GQLAYYQNIEE"
misc_feature <243220..244920
/locus_tag="RB2501_04305"
/note="Hydrogenase maturation factor [Posttranslational
modification, protein turnover, chaperones]; Region: HypF;
COG0068"
/db_xref="CDD:30417"
misc_feature 243334..243825
/locus_tag="RB2501_04305"
/note="Telomere recombination; Region: Sua5_yciO_yrdC;
pfam01300"
/db_xref="CDD:201719"
gene 244947..246047
/locus_tag="RB2501_04310"
/db_xref="GeneID:8454558"
CDS 244947..246047
/locus_tag="RB2501_04310"
/codon_start=1
/transl_table=11
/product="[NiFe] hydrogenase expression/formation protein"
/protein_id="YP_003193871.1"
/db_xref="GI:260060791"
/db_xref="GeneID:8454558"
/translation="MKFLSEYRDADLAKKYLAEIHSTVTREWNVMEVCGGQTHSLVKN
GIMDLLPKEVQMIHGPGCPVCVTPLNLIDKAIYLAEGKNVILCSFGDMLRVPGSKKSL
LQAKAGGADVRILYSPMEAVQIASENPDKEVVFFAVGFETTAPANALSIDKAYDLGLT
NYSILASQVLVPPAMEAVIEDEESKIDAFLAAGHVCTIMGMDEYYPLVAHYRIPMVVT
GFEPVDLLQGILLTVQQLEKGKAELQNQYSRVVKPKGNPKAQELIRKIFMVSDREWRG
IGTIPASGFEVRPKYAAFDANLKFTIQVEKVEEPKECIAGLVLKGIKKPKQCSQFGKK
CTPQNPMGAPMVSSEGACAAYYHFSGAAETVA"
misc_feature 244947..246032
/locus_tag="RB2501_04310"
/note="Hydrogenase maturation factor [Posttranslational
modification, protein turnover, chaperones]; Region: HypD;
COG0409"
/db_xref="CDD:30758"
misc_feature 244947..246026
/locus_tag="RB2501_04310"
/note="hydrogenase isoenzymes formation protein HypD;
Provisional; Region: PRK15062"
/db_xref="CDD:185022"
gene 246104..247123
/locus_tag="RB2501_04315"
/db_xref="GeneID:8454559"
CDS 246104..247123
/locus_tag="RB2501_04315"
/codon_start=1
/transl_table=11
/product="Hydrogenase expression/formation protein HypE"
/protein_id="YP_003193872.1"
/db_xref="GI:260060792"
/db_xref="GeneID:8454559"
/translation="MPKLDFDIITLGHGSGGLLTNKLLDSGVFHLFDNEHLQQRHDGA
MLTLEGKTAFTTDSFVISPIFFPDSNIGELAVNGTVNDLAMCGAIPQYLSLSFILEEG
LKMTEFWEILVSIKSAAEQANIQIVTGDTKVVERGKGDKIFINTTGIGQLHAKADIAP
SNVQPGDKIIVSDSIATHGVAIMSVREGLEFESELKSDTRGLSHMVSELLDTFGVDIH
LLKDPTRGGVATVLNEIARDRNLGIEILQKDLPLQNEVSALCEILGLDPLYVANEGIF
IAVVKDAISEKVVEKLQSMEYGANASIIGDVTENHPKQVVLKSAIGGRRIVNMLAGEQ
LPRIC"
misc_feature 246146..247024
/locus_tag="RB2501_04315"
/note="HypE (Hydrogenase expression/formation protein).
HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE
dehydrates its own carbamoyl moiety in an ATP-dependent
process to yield the enzyme thiocyanate. The N-terminal
domain of HypE is related to the...; Region: HypE;
cd02197"
/db_xref="CDD:100033"
misc_feature order(246158..246166,246251..246268,246272..246277,
246347..246349,246383..246385,246491..246493,
246497..246499,246506..246508,246512..246514,
246530..246532,246536..246538,246764..246769,
246776..246778)
/locus_tag="RB2501_04315"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100033"
misc_feature 246161..247120
/locus_tag="RB2501_04315"
/note="hydrogenase expression/formation protein HypE;
Region: hypE; TIGR02124"
/db_xref="CDD:162715"
misc_feature order(246272..246274,246347..246349,246773..246778)
/locus_tag="RB2501_04315"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100033"
gene 247180..249297
/locus_tag="RB2501_04320"
/db_xref="GeneID:8454560"
CDS 247180..249297
/locus_tag="RB2501_04320"
/codon_start=1
/transl_table=11
/product="tonB-dependent receptor"
/protein_id="YP_003193873.1"
/db_xref="GI:260060793"
/db_xref="GeneID:8454560"
/translation="MKNIALTAILLFAHALFFAQEQTQDTIQIDPVEVTAARSSSPLK
DLPITVALVSQRTILETQPPSATETLKYIPGVAIQNDGGITSTPIIRGLSRERAPILI
DGNSFVGGRIRSYALIDPWQIERVEVIKGPASAFWGSDAVSGLVNVITRRAENGYGKD
FKVGTSLYGGYQSVNSYSRGRLEVEGRGNGFDFLIGGGLRDADNTDTPGGEVPNSQFK
SAYFDWNIGYSPSENHRLEFSGKYFKNDNVGFPGGLGAPGPPVRDRVFAPDEQTGYNF
NYTGKNISNTIEEVGFNAYFKQQRLHIDQVTNVFFEDTMDINRRIDVSLDVDVDFGGF
KAFTALRLAENSKLTVGADFLREHRFGTKRELVVDIFNPMGAQVNQVAPPPGQIQPDS
DATFFGVFAVEEWKPSEVVDLLFALRFDNFKTEIEDEPFFIPEIADLYNEDNTSDNNT
ALTGNIGAKIHASDRSDFSINLANSFRAPDLFSKYNFADGVIPNPDLGPEKGVFYELG
YAYDGSKFDIGLNFYQNFLNDLYVPVSVDFQGTPNVQNQAVGEARLTGWEYQLSYAIG
KLSSVFWTGSYIRGKDRETDENLAFMPADQNIFGFQLRDNRNAFFGRVEGIFTSKQDR
PAPTERETDGYSLFNISGGINLHEVWPKFPYSKLVLSVDNLTDKEYQSHVFRGTPGNQ
TRFFAPGRSINAQLIIKLGVAGK"
misc_feature 247267..249276
/locus_tag="RB2501_04320"
/note="TonB-dependent hemoglobin/transferrin/lactoferrin
receptor family protein; Region: TonB-hemlactrns;
TIGR01786"
/db_xref="CDD:162537"
misc_feature 247324..249276
/locus_tag="RB2501_04320"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(247324..247353,247381..247410,247441..247458,
247477..247491,247537..247569,247603..247629)
/locus_tag="RB2501_04320"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(248125..248127,248206..248208)
/locus_tag="RB2501_04320"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 249332..249973
/locus_tag="RB2501_04325"
/db_xref="GeneID:8454561"
CDS 249332..249973
/locus_tag="RB2501_04325"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_003193874.1"
/db_xref="GI:260060794"
/db_xref="GeneID:8454561"
/translation="MKSAIGLFNQKGLVNVRLQQIADETGISVGNLAYHYHSKKAIVL
AIDSELGEELELLLSIDQNFPSLLDFDNHLGRYFFILNRYSFYFLDLLEIERAYPKLH
SKRVDYVEKMIAQIHEWLLLNVEKEILRPEKMENQYQHLAESIWMIITFWLTQRQVRG
KTDIGEGHFKEFVWNQLIPLFTEAGWMEFEAVILPQLKFYLDQSISVDFRKLP"
misc_feature 249332..249811
/locus_tag="RB2501_04325"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature 249332..249469
/locus_tag="RB2501_04325"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
misc_feature <249560..249901
/locus_tag="RB2501_04325"
/note="Bacterial transcriptional repressor; Region: TetR;
pfam13972"
/db_xref="CDD:206142"
gene 249990..250247
/locus_tag="RB2501_04330"
/db_xref="GeneID:8454562"
CDS 249990..250247
/locus_tag="RB2501_04330"
/codon_start=1
/transl_table=11
/product="hydrogenase expression/formation protein HypC"
/protein_id="YP_003193875.1"
/db_xref="GI:260060795"
/db_xref="GeneID:8454562"
/translation="MCLAVPGKIIGFEDTVESVFKIGKVSFDGIVKKINLGLVPEAKE
GDYVLVHVGVAMSIVDEEEAKRTMDFLLGTDELDDIRPDEE"
misc_feature 249990..250202
/locus_tag="RB2501_04330"
/note="HupF/HypC family; Region: HupF_HypC; pfam01455"
/db_xref="CDD:201805"
gene 250263..251033
/locus_tag="RB2501_04335"
/db_xref="GeneID:8454563"
CDS 250263..251033
/locus_tag="RB2501_04335"
/codon_start=1
/transl_table=11
/product="CODH nickel-insertion accessory protein"
/protein_id="YP_003193876.1"
/db_xref="GI:260060796"
/db_xref="GeneID:8454563"
/translation="MKIAIAGKGGVGKTTISGTLCRILGAKGDKVLAIDGDPNPNLSI
VLGIDKSDAGPPNLSTDIIERVETEDGKWKFQVRMPFQEVLETYGQKATDNVTLLMVG
KPEKAGTGCMCGSHTVVRELVNAALSSEQGQIMVLDTEASLEHMKRGTSKYVDKIYTV
VEPYYRSLEAASRFAEMAQQLGIGQVEAIANKVRTKEDEMAIREYCAKINLPIAVFVP
FDEQVMAADLKGKSVIDFDPEAKVVKALEALSAAILKN"
misc_feature 250311..250745
/locus_tag="RB2501_04335"
/note="The accessory protein CooC, which contains a
nucleotide-binding domain (P-loop) near the N-terminus,
participates in the maturation of the nickel center of
carbon monoxide dehydrogenase (CODH). CODH from
Rhodospirillum rubrum catalyzes the reversible...; Region:
CooC; cd02034"
/db_xref="CDD:73297"
misc_feature 250317..251030
/locus_tag="RB2501_04335"
/note="CO dehydrogenase maturation factor [Cell division
and chromosome partitioning]; Region: CooC; COG3640"
/db_xref="CDD:33438"
misc_feature <250653..251000
/locus_tag="RB2501_04335"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
gene complement(251035..252018)
/locus_tag="RB2501_04340"
/db_xref="GeneID:8454564"
CDS complement(251035..252018)
/locus_tag="RB2501_04340"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193877.1"
/db_xref="GI:260060797"
/db_xref="GeneID:8454564"
/translation="MNQDIKPSKGPKESQKKSEEKIPWWVDLQVKDLVRPITVKRMQL
LSAGALVLALAVVGYYAWENLLREPTGAEFVDEIVDAAGGLDTWNDIDQGQFTRTHNL
YDETGELLKSTEETFYFKRTVEGLKLQVKSVGDNDSEVVVGKDDYGFWATKDNQTVDP
MIAAKEEGMMCDSKFCDPQCASSMAFFRFSMPFKLKDRGVNASLASTGFNIAELNLLG
GSGKEPTLLDISYDPEVGKDSWRFYVDTQDKLIHKVEYYNKSDKGETRPEEIYWTDHK
TVDGITFSHRWTRYWPNGKVMDEYVYSDVDLGRELPDGFFNRRDGSELVER"
gene complement(252088..252606)
/locus_tag="RB2501_04345"
/db_xref="GeneID:8454565"
CDS complement(252088..252606)
/locus_tag="RB2501_04345"
/codon_start=1
/transl_table=11
/product="[NiFe] hydrogenase-specific C-terminal protease"
/protein_id="YP_003193878.1"
/db_xref="GI:260060798"
/db_xref="GeneID:8454565"
/translation="MADALKKILVAGVGNELKQDDAFGIEFAKKFRDAVSHLDHIMVM
EVGIGGIHLVQELHAGYDILILADAVAWGEEAGHIYFREMEKVSDIEEMPVFEKRTFL
ADMHYTNPIRALMLAKALKVLPNEVYILGCEAAQHDDFAVGMSEAVEDALPKAMRKLQ
NWLSQKKLANFE"
misc_feature complement(252139..252591)
/locus_tag="RB2501_04345"
/note="coenzyme F420-reducing hydrogenase delta subunit
(putative coenzyme F420 hydrogenase processing subunit);
Region: frhD; TIGR00130"
/db_xref="CDD:161726"
misc_feature complement(252118..252582)
/locus_tag="RB2501_04345"
/note="Putative [NiFe] hydrogenase-specific C-terminal
protease. Sequence comparison shows similarity to
hydrogenase specific C-terminal endopeptidases, also
called Hydrogen Maturation Proteases (H2MP). Maturation of
[FeNi] hydrogenases includes formation of...; Region:
H2MP_like-1; cd06068"
/db_xref="CDD:99878"
misc_feature complement(order(252289..252291,252403..252405,
252544..252546))
/locus_tag="RB2501_04345"
/note="nickel binding site [ion binding]; other site"
/db_xref="CDD:99878"
gene complement(252612..253406)
/locus_tag="RB2501_04350"
/db_xref="GeneID:8454566"
CDS complement(252612..253406)
/locus_tag="RB2501_04350"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193879.1"
/db_xref="GI:260060799"
/db_xref="GeneID:8454566"
/translation="MIGLLGLGCKGDSKKDSSVERTVPAKEELSKADKLVKEAIHSAG
GMGNWSAKKTMSYTKNIQSFDSSGTLLRTVAQIHKYQLKPSFKTYMSWELDGNKHEIV
NNGKQAWKLVNGEIQEDKVAVNSAWNSSFGSQYMVCMPFKLKAPGTLLKYEGIDTLSN
NRIVHNLQVTYEKGAGSSGGMHTWNYYLNTDNYQFVANFLDHGKGYTYTDYDTFIEVD
GIVVTKERKSYVSNENREPVYLRTVYSNSNIQFDIELPEELFKVKN"
gene complement(253423..253716)
/locus_tag="RB2501_04355"
/db_xref="GeneID:8454567"
CDS complement(253423..253716)
/locus_tag="RB2501_04355"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193880.1"
/db_xref="GI:260060800"
/db_xref="GeneID:8454567"
/translation="MKPVLFNNVEFKEIMQYVQELVKQSGNIPDEETRELTAEILKYF
DLMHREPLSRMLQAIERSYPDLKDTLKQDYTINTLLELYDFENTNLPDKQEKT"
gene complement(253718..254116)
/locus_tag="RB2501_04360"
/db_xref="GeneID:8454568"
CDS complement(253718..254116)
/locus_tag="RB2501_04360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193881.1"
/db_xref="GI:260060801"
/db_xref="GeneID:8454568"
/translation="MKNESVEDSALRSLFWKEEILQVMYWMHGEGMGSEVSLTQMLPF
LNTSYQNLEYHLNKLTDIGLLVMLDKDGNIHYKLSKSGKKEGGRQFAEAFQGMQKAGH
GECGPDCEFCYGPDGVKLDNCVHNCASGSH"
gene complement(254113..254538)
/locus_tag="RB2501_04365"
/db_xref="GeneID:8454569"
CDS complement(254113..254538)
/locus_tag="RB2501_04365"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193882.1"
/db_xref="GI:260060802"
/db_xref="GeneID:8454569"
/translation="MNWGPIAIVQYFQTLKKSFDRVVFLVAIERPERKIGDISVYQWL
GHLPSEKQIQACVGDAATGVISVENLLVIGEHFKIWPKEVYLVDVEPGAEQAGEYLTA
EVEAKIPEILRILGQFAQENDIVLETEKLRGDTLFEESV"
gene complement(254654..256528)
/locus_tag="RB2501_04370"
/db_xref="GeneID:8454570"
CDS complement(254654..256528)
/locus_tag="RB2501_04370"
/codon_start=1
/transl_table=11
/product="cytochrome C3-like [NiFe] hydrogenase large
subunit"
/protein_id="YP_003193883.1"
/db_xref="GI:260060803"
/db_xref="GeneID:8454570"
/translation="MCFKNLPIAFDEQGNAYLKEGLADPYEHKVVDLGEEQEVLKGLL
ERNGFIRNIDYDPVTRVAGALAFHSVVDLEKRKVLSTNSMATLFRGYEVILKGRDPRD
AAYISSRACGVCGGVHATTAALAIEMALGIKPPPLGIVMRNILLAIEYLYDHPLHLFL
LAGPDYSEELVRETNPELLDKAANTKAKNKEVHGYDTILDIMKDLNPLKGKLYLEALS
MTRVAREAYVLIGGKYPHPQSVVPGGLSVTVNITVLNEVYSRLIKFFDYSQKVTGIWD
DVFDFFLESNPEYAKCGIRPATMMDTGVWDRPEHYDASFENCDKWGEARWSTPGVLVD
GEVVTTKLTELNAGIEEFVEHSYYEKWDGHRFKEDANGMPLSPNHPWNKETIPKPGKQ
SWKDRYSWDTAPTWDRMPMEAGAYTRMYLTAKAQKAPASRFLENTGTSMKIHVPKHYL
PEKTLEWKIPEHWNAFERNRARAYCIPYSAMVAMENWLLAMDLIKNGETKVSVPYEIP
KKGTHIGFGAWGAGRGFLTHHLIVENGVIDNYQIITPSTLNAAPRTPWGEMGPYEEAV
LNTPILEKFDNPEDYKGIDILRAIRSFDPCMPCTTHIMAKDTDHMVTREVTTCACGVE
"
misc_feature complement(254678..256381)
/locus_tag="RB2501_04370"
/note="Ni,Fe-hydrogenase I large subunit [Energy
production and conversion]; Region: HyaB; COG0374"
/db_xref="CDD:30723"
gene complement(256559..256834)
/locus_tag="RB2501_04375"
/db_xref="GeneID:8454571"
CDS complement(256559..256834)
/locus_tag="RB2501_04375"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193884.1"
/db_xref="GI:260060804"
/db_xref="GeneID:8454571"
/translation="MNSSTLFIATIIIVTLLVLVLVVYLVLIIVALRRAGTHLEGLAG
GLQKIQDDTSPLGEKVGVINGALEKLHGGLSSVDSHLVAIAKVLKLA"
gene complement(256841..257005)
/locus_tag="RB2501_04380"
/db_xref="GeneID:8454572"
CDS complement(256841..257005)
/locus_tag="RB2501_04380"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193885.1"
/db_xref="GI:260060805"
/db_xref="GeneID:8454572"
/translation="MKEAGIGVAGNTEHIKALNDTIGVASGMLDVAGSINENADTLKT
TLATRAEKIN"
gene complement(257133..257423)
/locus_tag="RB2501_04385"
/db_xref="GeneID:8454573"
CDS complement(257133..257423)
/locus_tag="RB2501_04385"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193886.1"
/db_xref="GI:260060806"
/db_xref="GeneID:8454573"
/translation="MNVILMIITILAVLLLVYVLVYYLHGIIKLLTSIGGDGQSYLAK
LRLGLRAIETETGHLPVQVTKLNGALTEVAEGLKVVDGQLEESINAAVKQNI"
gene complement(257420..257746)
/locus_tag="RB2501_04390"
/db_xref="GeneID:8454574"
CDS complement(257420..257746)
/locus_tag="RB2501_04390"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193887.1"
/db_xref="GI:260060807"
/db_xref="GeneID:8454574"
/translation="MDTGIQLWIISLVIGLVVIGVVAFLLNLIKKTAKDIDRTAADIW
TQGKLTANNTIHIPLFLTKTNQVASKILNSAVAIVGGSKAITQHIEGCPGCPHCMLQS
SKNSSL"
gene complement(257766..258047)
/locus_tag="RB2501_04395"
/db_xref="GeneID:8454575"
CDS complement(257766..258047)
/locus_tag="RB2501_04395"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193888.1"
/db_xref="GI:260060808"
/db_xref="GeneID:8454575"
/translation="MEMENEALLNEWLIGLALVSVIVVIAAVLLILVWLAAKRILRLA
GAALEIVTQIKNNTNSIWELETTNNVAAGIQKEAEAIEAHATLVAEALE"
gene complement(258050..258214)
/locus_tag="RB2501_04400"
/db_xref="GeneID:8454576"
CDS complement(258050..258214)
/locus_tag="RB2501_04400"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193889.1"
/db_xref="GI:260060809"
/db_xref="GeneID:8454576"
/translation="MTMAFQNRTPKWNKEGKVPSGWGHVKEPNLVKKVMHYTYEKMQF
SDSPKPGSNK"
gene 259397..259480
/locus_tag="RB2501_04405"
/db_xref="GeneID:8454577"
CDS 259397..259480
/locus_tag="RB2501_04405"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193890.1"
/db_xref="GI:260060810"
/db_xref="GeneID:8454577"
/translation="MGFINGNFFETKFLDEKRIIFTKKHYF"
gene 259503..260615
/locus_tag="RB2501_04410"
/db_xref="GeneID:8454578"
CDS 259503..260615
/locus_tag="RB2501_04410"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193891.1"
/db_xref="GI:260060811"
/db_xref="GeneID:8454578"
/translation="MIKRILEEKITQRLDKGKAILVIGPRQVGKTTLINSILDNREHL
FLDGDDSTVRNLLTDPNTEQLKSIIGNHNTLFIDEAQRIENIGLTLKIITDQFKKVQL
LVSGSSAFELNNQTSEPLTGRKWEYKLYPISWRELEDSIGYVKSEQQLELRILYGMYP
DVINNLGDEIEVLKQLTNSYLYKDILAFSGIRKPQMLEKLLRALALQLGSEVSYNELA
QLVGVDKNTVANYIDVLEKGYVVFRLSSFSRNLRNEIKTNQKIYFYDTGVRNAVIGNF
NLLDSRSDKGGLWENFLIAERIKKLAYDGSLANSYFWRTKQQQEIDYVEEVSGQITGY
EFKWSEKAKAKLSKSFMVSYNAAIEVIHRNNFREFV"
misc_feature 259503..259871
/locus_tag="RB2501_04410"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 259509..260612
/locus_tag="RB2501_04410"
/note="Predicted ATPase (AAA+ superfamily) [General
function prediction only]; Region: COG1373"
/db_xref="CDD:31564"
misc_feature 259572..259595
/locus_tag="RB2501_04410"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(259575..259598,259734..259736,259827..259829)
/locus_tag="RB2501_04410"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 259722..259739
/locus_tag="RB2501_04410"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 259869..259871
/locus_tag="RB2501_04410"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene complement(260677..261396)
/locus_tag="RB2501_04415"
/db_xref="GeneID:8454579"
CDS complement(260677..261396)
/locus_tag="RB2501_04415"
/codon_start=1
/transl_table=11
/product="integrase"
/protein_id="YP_003193892.1"
/db_xref="GI:260060812"
/db_xref="GeneID:8454579"
/translation="MKNGGVGMKNNTIGKLVKNLKAFLNDRVRRNRIKPIDLSSFKVV
QEEVDHIYLTDDEIQAIADVDCKEDKELEKVKDFFVIGCLTGLRFSDISRIRPEYLDS
EGFLNIRQKKTSGRIVVPLRKQVKAILDKYSGYAPDIDSFTFNRRIKELGDSAKLHQK
VEIEHKRGTIKEAQLLEKYKLISSHTCRRSFCTNAYLNGIDVQLIMKISGHKSEKAFR
RYLKISNYEAAQKLKEAWGLD"
misc_feature complement(260692..>261369)
/locus_tag="RB2501_04415"
/note="DNA breaking-rejoining enzymes, C-terminal
catalytic domain. The DNA breaking-rejoining enzyme
superfamily includes type IB topoisomerases and tyrosine
recombinases that share the same fold in their catalytic
domain containing six conserved active site...; Region:
DNA_BRE_C; cl00213"
/db_xref="CDD:211431"
misc_feature complement(order(260737..260739,260842..260850,
261061..261063,261130..261135))
/locus_tag="RB2501_04415"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29495"
misc_feature complement(order(260737..260739,260764..260766,
260833..260835,260842..260844,261061..261063,
261133..261135))
/locus_tag="RB2501_04415"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:29495"
misc_feature complement(order(260737..260739,260764..260766,
260833..260835,260842..260844,261133..261135))
/locus_tag="RB2501_04415"
/note="active site"
/db_xref="CDD:29495"
gene 261439..261657
/locus_tag="RB2501_04420"
/db_xref="GeneID:8454580"
CDS 261439..261657
/locus_tag="RB2501_04420"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193893.1"
/db_xref="GI:260060813"
/db_xref="GeneID:8454580"
/translation="MIIEGVKVYYNTGKLFKTFQMLFKGIVIFNNILNYLSFFTFQII
FKLGKKVLKWFLIYRWFTFFKLFFEKFF"
gene 262044..262235
/locus_tag="RB2501_04425"
/db_xref="GeneID:8454581"
CDS 262044..262235
/locus_tag="RB2501_04425"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193894.1"
/db_xref="GI:260060814"
/db_xref="GeneID:8454581"
/translation="MEASRPDRCKAKPFARKCGGFFRFAALELAQKSGETEKANGGDS
RRKDFALQQAHPLGRFRMK"
gene complement(262517..263410)
/locus_tag="RB2501_04430"
/db_xref="GeneID:8454582"
CDS complement(262517..263410)
/locus_tag="RB2501_04430"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="YP_003193895.1"
/db_xref="GI:260060815"
/db_xref="GeneID:8454582"
/translation="MLVFLNPWTQPLIAQASHFLELPGVTLHYRDLGEGLPVLLINGG
PGMSSEGFLMMAGNLAENNRVILFDQRGTGLSELDVVNDSTVTMDRMVADIEALRRHL
GINRWVVMGHSFGGILAYYYASKYPDRLLGMIQSSSGGMDLELLATLDIPGGLTPVEQ
DSLRYYNRRIQRGDTTHATRLKRGEFLAPAYVYHREHIPVVAERLTQGNRTINRLVWQ
DLRRMGYDVKSQMRMLACPVLILHGRQDIVSPELAGKAHRILQDSRLVILEESKHYGW
LDNPGGYFAAIEEFLGMLRDR"
misc_feature complement(<262961..263329)
/locus_tag="RB2501_04430"
/note="Serine carboxypeptidase S28; Region: Peptidase_S28;
cl15279"
/db_xref="CDD:199137"
misc_feature complement(262538..263314)
/locus_tag="RB2501_04430"
/note="proline-specific peptidases, Bacillus
coagulans-type subfamily; Region: pro_imino_pep_2;
TIGR01250"
/db_xref="CDD:188121"
gene 263591..265624
/locus_tag="RB2501_04435"
/db_xref="GeneID:8454583"
CDS 263591..265624
/locus_tag="RB2501_04435"
/codon_start=1
/transl_table=11
/product="dipeptidyl aminopeptidase"
/protein_id="YP_003193896.1"
/db_xref="GI:260060816"
/db_xref="GeneID:8454583"
/translation="MKRFAFLLLALWVLPATTQQPSLQQILGYSFPTELTASETSGLV
AWVENAEGVRNIYYARGLEYLPVQLTRYTADDGQELSQLRFGPEGKTLWFVRGGSANR
QGEYPNPVSMPDPPEQTIHKASLENSDIQALSEGHHPLLAGDRVIFLRKGQPRIMDLS
GENESPLFKVRGSVSGLALSPDGSKLAFVNSRGDHSFIGIYNFATEAFHFQDPSIDRD
SDPVWSPDGQQLAFLRTPYEEPELFVPRRQGLPFSIRVTEVASGKTQTIFTADAGTGS
VFQGVSASNQLFWTARNTLIFPWEKDGWRHLYELPAGGGEPRLITPGAGEVQYVSQNT
DRGTLLFNSNQADRDRPHIYSYDGGLKQLTRGESLEWTPVMDGDGAIFCLGSTATDPA
NVKRIIPGGIEAVTRDLNYPSESLVVPVAVSLTASDGHPSYGQLFVPPGLKRGEKAPA
VIYFHGGSRRQMFPGFHHLGYYHYAYAMNQYLAQNGYVVLSLNYRSGTGYGLEFREAE
GYGAAGASEYRDVLAAAGFLQNHPQVDASRLGLWGGSYGGYLTALGLARNSDRFKAGV
DIHGVYDWNNIIEGFMPSYNPLAKPEFAKRAYEASPIAVMEGWKSPVLLIHGDDDRNV
PFSETVKKAGRLRELGVEFEQLVFPDDVHMFLLHDNWYRALEATKDFFDRKLN"
misc_feature 263654..265618
/locus_tag="RB2501_04435"
/note="Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
[Amino acid transport and metabolism]; Region: DAP2;
COG1506"
/db_xref="CDD:31695"
misc_feature <264239..264322
/locus_tag="RB2501_04435"
/note="WD40-like Beta Propeller Repeat; Region: PD40;
pfam07676"
/db_xref="CDD:203719"
misc_feature 265028..265621
/locus_tag="RB2501_04435"
/note="Prolyl oligopeptidase family; Region: Peptidase_S9;
pfam00326"
/db_xref="CDD:201156"
gene 265815..266540
/locus_tag="RB2501_04440"
/db_xref="GeneID:8454584"
CDS 265815..266540
/locus_tag="RB2501_04440"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193897.1"
/db_xref="GI:260060817"
/db_xref="GeneID:8454584"
/translation="MKNAYAILAGVFFLFCTAGIQAQGLYHKGTLQLKKGKEKEVYIE
IDFGFPQRFQQGITYVEPKDWAKYQKTGKLKGKMKQKMEPKHFESFTLEDGRVFETIW
YTDLTGRAIKMIPKRMTLQRIADGPIKVYKLYSRTTGKINHELADYVMGKREDLVNYI
QNNFQLLIHKHSKHPKNVQQINLLNYIGDNARVKENYDKNHYGLRDQFSAEHKMGIYV
GKEYEAAFLRLVNDYNGDTGAAR"
gene 266732..267316
/locus_tag="RB2501_04445"
/db_xref="GeneID:8454585"
CDS 266732..267316
/locus_tag="RB2501_04445"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193898.1"
/db_xref="GI:260060818"
/db_xref="GeneID:8454585"
/translation="MIVLLLLPACGESKKEANSPQGADAAVEETPYGDESNASPAQQG
DYSALYALGESCKLTPGQLAEALDLEAGQVEEKGNYQGNCTYAVTEPGGLTIQYQVGN
ERWPQDIVLDNIRTARESDLYDIRMSDSGDTYITRHPAQGFLLLLNPEYANPVKISFN
YFNPDGPKLTEAQMAQRRENTYKIANYLIESYQK"
gene 267323..268669
/locus_tag="RB2501_04450"
/db_xref="GeneID:8454586"
CDS 267323..268669
/locus_tag="RB2501_04450"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193899.1"
/db_xref="GI:260060819"
/db_xref="GeneID:8454586"
/translation="MKPNNQLWILGVLLLAVLPVSAQPFSLNDKIQPVELALQEDSRP
GRGDAKFLATLSTVDTTNYYYITGHDMFRFVDIIVKGLGNSSPLEASLVYDNWKDVVE
TQSSGRAEDGIMHFQVRAYGAIGLIINSPRDETVNFTIMASASTPRKSYLGNPFVPIS
DGDAVAGAAGTSGEGGSSGNNTFLYIALGIALLVIGLLAGKLMGRKSASVIALMLTFT
FQAAGQNGATPGFFYKDRYYNGEDLDNGKFEEDLEEEMGDGYDPSDDISDLNDKLNSI
KEFLDNATNLYDSYSGLGSCINSTPLPGEPRIPSFCDEPLTTAGPDNENSCAACFLDA
RRQFNEVRYLFEQLATIYKCTKDFSNAALSFGDNASGIHAVSGMAWQTQRRNIEKSIV
DLEAAYDNKYGELLNSLSESMLKLSECEARYGVEDWFDRFGYMYFEFIKDKYRRKD"
gene 268672..269082
/locus_tag="RB2501_04455"
/db_xref="GeneID:8454587"
CDS 268672..269082
/locus_tag="RB2501_04455"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193900.1"
/db_xref="GI:260060820"
/db_xref="GeneID:8454587"
/translation="MGLNELRLIGMAWACCLVLGCKSTGPATAPAPIEHSILGSWEGC
DGRVVTFTREPDGLILGHYSELGGLGKYGFTRLEEGYRIRRQGRGTYNGKVKWRDTKG
NASWKNVVITIEIDNVFRSDGSDSCSAEMTRLDP"
gene 269147..269524
/locus_tag="RB2501_04460"
/db_xref="GeneID:8454588"
CDS 269147..269524
/locus_tag="RB2501_04460"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193901.1"
/db_xref="GI:260060821"
/db_xref="GeneID:8454588"
/translation="MKKLLLLFLVISSQPILAQIEQDKLLHYGAGVASGAAGAFIAHE
ISGGNRWWTLTGAVGGSLIAGLAKEAIDKNRYGVWDNGDLAATVAGGVTVGVVIELFR
GKNRRGRTNASRSFRGFRVVAGR"
gene complement(269527..270093)
/locus_tag="RB2501_04465"
/db_xref="GeneID:8454589"
CDS complement(269527..270093)
/locus_tag="RB2501_04465"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193902.1"
/db_xref="GI:260060822"
/db_xref="GeneID:8454589"
/translation="MKALNFVLSALAVIALAGCGEQPEPEMSESAEAQPDYQAFEKQV
GIIESLFAAHAAEDLERIDGMLADTLQFSPPAYNGGQWVGKEEFLSGIRGYHENFDNI
QWHEGIVMPDSTVGAYWSGSVFPEATATIEPDVIRVYGTWHATHTESGKDVGVKFFTL
ITINEAGKISQISEYFDVNGLAVQIAEE"
misc_feature complement(269587..269955)
/locus_tag="RB2501_04465"
/note="SnoaL-like domain; Region: SnoaL_2; pfam12680"
/db_xref="CDD:205015"
gene complement(270312..270623)
/locus_tag="RB2501_04470"
/db_xref="GeneID:8454590"
CDS complement(270312..270623)
/locus_tag="RB2501_04470"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193903.1"
/db_xref="GI:260060823"
/db_xref="GeneID:8454590"
/translation="MEKLAVLKTIDEVIQMDEEIKDGEIDFMNRLSDTLDVGPDLILE
ARNTEPAEALAVLRAMPDEQKQLLARLLNEAANSDGEVDEREIQFIYRVLTAAGIQLR
N"
gene 270786..271187
/locus_tag="RB2501_04475"
/db_xref="GeneID:8454591"
CDS 270786..271187
/locus_tag="RB2501_04475"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193904.1"
/db_xref="GI:260060824"
/db_xref="GeneID:8454591"
/translation="MYFYKTMEGNYNVLGTKLIPCSRDPLTGFYRDGDCRTGPGDTGT
HVVCAVMTAEFLQFTRSRGNDLSTPMPYFNFPGLQPGDSWCLCASRWKEAYREGVAPP
VILEATHRKALEILEFEWLLEYKHTPEDAAG"
misc_feature 270819..271163
/locus_tag="RB2501_04475"
/note="Uncharacterized protein conserved in bacteria
(DUF2237); Region: DUF2237; pfam09996"
/db_xref="CDD:204371"
gene complement(271197..271514)
/locus_tag="RB2501_04480"
/db_xref="GeneID:8454592"
CDS complement(271197..271514)
/locus_tag="RB2501_04480"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193905.1"
/db_xref="GI:260060825"
/db_xref="GeneID:8454592"
/translation="MKYNLVEQLAVIKALDEVILVDKLVYEEEASFIAHLAKVLGFKM
DLIRKARNVEAAQAMAVLKLMSENKKHALSVLLREAAGADGRITDAELELIQGILREI
EPD"
gene complement(271576..271887)
/locus_tag="RB2501_04485"
/db_xref="GeneID:8454593"
CDS complement(271576..271887)
/locus_tag="RB2501_04485"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193906.1"
/db_xref="GI:260060826"
/db_xref="GeneID:8454593"
/translation="MSDASNPKSPLSPKSGPGVKSKTGPGVKSKTGPGVKSKTGPGVK
SKTGPGVKSKTGPGVKSKTGPGVKSKTGPGVKSKTGPGVKSKTGPGVKSKTGPGVQSK
S"
gene 271995..273995
/locus_tag="RB2501_04490"
/db_xref="GeneID:8454594"
CDS 271995..273995
/locus_tag="RB2501_04490"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193907.1"
/db_xref="GI:260060827"
/db_xref="GeneID:8454594"
/translation="MKFSKFIKECQEYNVLKNISIYIVSSWVLLQVIDLIAGPLGFSN
QVVAWVLILLLIGLPLYIFGIWKLKLANSIKRKPVTDAEGNPVPGKFRRSGFQKIYFF
FLALISLICLGIALFIVNTNFVRSMDLPSLETGDKIAILEFENLTGDPENDLVGKMAV
DWIIHGVTRNKLGQVISPEIISDYSKVLRASLVPSEDNGLFSNYLKPSRIVEGEYYLA
DGRLIFQCAILDGSMDRTLISFEPVSCDPDSPLDCIEALNQRIQGYFVNVERKEESLE
EHPPKYEAYELFNRAKQWRYEDDRKYLDLLNQAIAADTTFFEPKIYRFMHYFNRGAYR
TADSLLTRIKLSSGMFPRQRNLLNVYDALLQGNHRNTYRYQKEEYKITPLHLETNSNM
MVFTLQLVNKPRGVDSIFREVAMGEMDLSQCDFCTERYKIKAMSDIELGDFPAAIALL
RQFEDGVEFGILKKILLRAHIRKGDFPKAQSLLSRYADLFDPAQLSDIRLFAAKEFII
AGRQDLADATLSEILTDQDYGSAKTDSTALPVIAESLFYKGDYQEAETVLEELTGRGE
ADFYFTSLLAACYHKNAEPQRAAALIADLESRKGPYQFGEVPYSLGQYYAITGDAQRT
YQYLLRAIAEGHWYETGAFRNDPLLKDYINTDTFSRIRTFWH"
misc_feature 272364..>272705
/locus_tag="RB2501_04490"
/note="TolB amino-terminal domain; Region: TolB_N;
cl00639"
/db_xref="CDD:207145"
misc_feature 273537..>273836
/locus_tag="RB2501_04490"
/note="type III secretion low calcium response chaperone
LcrH/SycD; Region: LcrH_SycD; TIGR02552"
/db_xref="CDD:211752"
gene 274019..276307
/locus_tag="RB2501_04495"
/db_xref="GeneID:8454595"
CDS 274019..276307
/locus_tag="RB2501_04495"
/codon_start=1
/transl_table=11
/product="Peptidase C14, caspase catalytic subunit p20"
/protein_id="YP_003193908.1"
/db_xref="GI:260060828"
/db_xref="GeneID:8454595"
/translation="MDLLQNAHALLIGISYEDGLDTIGDAEDVARILRDPERCGYPPG
QVTLLTGADADRKGILGALEALAERTDEQSSVFLYYSGHGDVLDGVFHFVPHGIREGM
EYDEYTAAWVTAEEIRDRINALSTRRLIFFMDCCHATGIASSGFRPKIAGSGDEGPGK
QGPSFEKLEGLAQKVDNEKGISIVASCKEEQESYQLNGDKNSVFTKYLLEALEGNHLT
EVTDPYVRILEVAGYLLRVVPETIEQVARDCDPPLDIRQEPYVNLEMYDNFILSRIPG
NRPAQGASATVGKAPGVAATDKSAPEAGQPQAKEARLIYRETPGANNLILFIHGFTGE
ASRTFGSLPDLLMDDPEFDGWDMKPFGYSQFIEPEHGKQVWGGIRDIQRIVDYFCTSV
KYKFADYDRIAIVAHGLGGLVAQKALLQIPGDALGKISHLVLMGCPSHGLAPEEFEAE
WHKDYAQMRREGPFISGLRKDWDTRFGGELPFSLSVIGASSDTFVSPESCFGPFPEAA
CVTLDGDHFSIVRPDGPQAPSHRLIREFLTGSEALGEFGDAQERNLALGRYEAVVREL
GEDPMALSGKGIKQLVFALEGLDRRDEAMKLLDSHPEAERSTDLMGIIGGRYKRAYLR
KPNKKDGETAQVYYGIALDAAREKNDSPQVYYLAINLAFLALVVDEDRDSMQTFARLA
LEAAENSPDSLWKTATLGEAALYLGDLEAAQTHYALASSQAGIREKLSIHLNALAAYC
ELYETRREEDAFIRFLKAHYLS"
misc_feature 274040..274663
/locus_tag="RB2501_04495"
/note="Caspase domain; Region: Peptidase_C14; pfam00656"
/db_xref="CDD:201376"
misc_feature 274949..>275470
/locus_tag="RB2501_04495"
/note="Predicted hydrolases or acyltransferases
(alpha/beta hydrolase superfamily) [General function
prediction only]; Region: MhpC; COG0596"
/db_xref="CDD:30941"
gene 276321..276545
/locus_tag="RB2501_04500"
/db_xref="GeneID:8454596"
CDS 276321..276545
/locus_tag="RB2501_04500"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193909.1"
/db_xref="GI:260060829"
/db_xref="GeneID:8454596"
/translation="MKHFKKGQIPDLDFQKAVKKPIPIRCVQLDVPFRVETMEGVMEG
KAGDWLVVGVHGEMYPIDAEIFSKTYDLVR"
misc_feature <276378..276530
/locus_tag="RB2501_04500"
/note="PGDYG protein; Region: PGDYG; pfam14083"
/db_xref="CDD:206253"
gene complement(276575..279031)
/locus_tag="RB2501_04505"
/db_xref="GeneID:8454597"
CDS complement(276575..279031)
/locus_tag="RB2501_04505"
/codon_start=1
/transl_table=11
/product="Peptidase C14, caspase catalytic subunit p20"
/protein_id="YP_003193910.1"
/db_xref="GI:260060830"
/db_xref="GeneID:8454597"
/translation="MLVDVENPYVGLRPYNDDESLLFFGRKEQTMELLQRLHAHHFVA
VVGSSGCGKSSLLRAGLIPSLKAGYLVDDSDQWLISIMKPGQNPMGNLAKSLLSELYQ
AHDADATNQLVQTIEEEGVDAILSLLEPLFRERKTNFFILVDQFEELFRFATEKGNRK
RRDNAIDFVNIILELARQKDLPIYVVLTMRSDFIGDCAEFHGLPEAMNQSLYLVPRLN
RQQLKMVIEGPARLFGARVNSALSSKLLNEMGRVQDELPLLQHALMRIWEFETREDAN
GEMDLEDYKAIGGLENALSNHADEALKTLDKNEFQVAKQMFQALTTVDEHGRKTRRPA
HYGELLALTGTSEAVLDKVIRVFIEGRRSFLMIDQMSDKKDNIIDISHESLIRQWKRL
DRWVEEEGEMASTYMKLSQDYQLYADKKKDLLKGTELSLARDWYERFQPTEAWAKRYN
TLFAACREYLGDSEKAEKRDRKNRRNLKIGIWSLAGVMVLAAVYFFVYPIIRDSLDTM
RTYNDLKAQAVASFEQLQDQDPQASDDPEQAGISPQEPYLKLLESIEKQGIFYREDAV
RAQIEALGEDPGDITAGAEEAAYRPGKDVAGKLKADMSELWVDILAKLKDLEAELDEE
NWEIADSEGTVEAYTNYLQAVDKYNFPEVAGHLEAAREKQEELSQDPEWTQAQTTNTA
NAYLEYLRTHIENTEGSTKEDLSPQSQEALERIRAVSRVGWLFAGRALTDEVDDDSLL
GQDRVFDLVFRLGEPNVESSRIPKVEDVLLSKSNRAAYNEFTGNSVKGKKGAFIQNGN
LVLVLERKILGDVLFLKVAY"
misc_feature complement(278585..278965)
/locus_tag="RB2501_04505"
/note="AAA ATPase domain; Region: AAA_16; pfam13191"
/db_xref="CDD:205372"
misc_feature complement(278870..278893)
/locus_tag="RB2501_04505"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(278867..278875,278879..278884))
/locus_tag="RB2501_04505"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
gene complement(279031..280575)
/locus_tag="RB2501_04510"
/db_xref="GeneID:8454598"
CDS complement(279031..280575)
/locus_tag="RB2501_04510"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193911.1"
/db_xref="GI:260060831"
/db_xref="GeneID:8454598"
/translation="MAYVPGYEYDIFISYAHVDNICFPDQEDGWIKQFYQNLNLMLAR
QFGRMDSVKIWWDTKKLDGSVLFDDSIADGIRKSAIIICLDSPGYNASDYCKQELGTF
RDSASADKLGLKVGDQSRILHVLLNNIPHEKWLEPLNGTTGFPFHDAETADDFGETVE
TTSPKFKAQMRHVKNAVARLLEAMKTRCEAPAKLASQTTKLAADPAQAETADDDAFTI
FMSEVPDTLRSPRKRLIAELGKRGYRVKCGIPPPDASDALKAATEEAVAGADLAVNLL
DIYPGRELVDQPDLWYPQVQTEICLQSETPQMVWIPSDAEFADIEEGEYRNFLTAVEA
GKLVDKQYEFIRGSKSSLAQQIEDYAQQIKDRKPAEMPSDGRMSVLLDTHEKDHLYAL
DLSRLLVQKQILPFINPQEDDPLKNLEMLGNRMSQVRKLIFLYGNVSKEWVKERVNAA
LQLIMKNNYPVEDFFIYVAPPHKEDADIGINQRLLKINMIDQSDNPDLNDAAIEEFLK
ELRMPA"
misc_feature complement(<280261..280545)
/locus_tag="RB2501_04510"
/note="TIR domain; Region: TIR_2; pfam13676"
/db_xref="CDD:205852"
gene complement(280641..281090)
/locus_tag="RB2501_04515"
/db_xref="GeneID:8454599"
CDS complement(280641..281090)
/locus_tag="RB2501_04515"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193912.1"
/db_xref="GI:260060832"
/db_xref="GeneID:8454599"
/translation="MEMNEEQFMRDRVDDQLNWYRKKSTRNKKYHMLFSGIIIVSGSL
IPLVAGYSQWNSQFDGLLVACLGVLTAMATGIAALYKFQEKWLSYRTAAEALLREKIL
YQTRTRAYAGNREAYALFVSNVEDILSNENRGWNEIMASSGASEAGA"
misc_feature complement(280731..281051)
/locus_tag="RB2501_04515"
/note="Protein of unknown function (DUF4231); Region:
DUF4231; pfam14015"
/db_xref="CDD:206185"
gene complement(281133..282290)
/locus_tag="RB2501_04520"
/db_xref="GeneID:8454600"
CDS complement(281133..282290)
/locus_tag="RB2501_04520"
/codon_start=1
/transl_table=11
/product="mannonate dehydratase"
/protein_id="YP_003193913.1"
/db_xref="GI:260060833"
/db_xref="GeneID:8454600"
/translation="MMPCMRWYGPQDGVSLTAIRQAGAAGIVTALHQIPPGQVWETAA
IRERQRVVREAGMEWVVVESLPVSEAIKQQKGDYLDHIANYQQSIRNLAACGIRVITY
NFMPVLDWVRTELEHPNPDGTRTLRFDRAAFAWFDIHSLGRPGADADYDAGVRKRAAA
LDDSLGEERRNRIRRSVLQGLPGSDEHFTEAALMALLADYDRIPESRLRKHLIEFLEA
VVPVAEASGAVLAVHPDDPPYPLLGLPRVVSGHDHLQKLFDAVPSVANGLCFCTGSLG
AGKTNDLPSMVDAFGERIHFLHLRNVAHEADGAFRESDHLDGHVPMEEVVSRLLRLMA
RRGLSLPMRPDHGFLHELEHGSKSYPGYSLTGRLKGLAELRGLEKGLLYAG"
misc_feature complement(281148..282290)
/locus_tag="RB2501_04520"
/note="mannonate dehydratase; Provisional; Region:
PRK03906"
/db_xref="CDD:179671"
misc_feature complement(281148..282290)
/locus_tag="RB2501_04520"
/note="mannonate dehydratase; Region: uxuA; TIGR00695"
/db_xref="CDD:129778"
gene complement(282391..283131)
/locus_tag="RB2501_04525"
/db_xref="GeneID:8454601"
CDS complement(282391..283131)
/locus_tag="RB2501_04525"
/codon_start=1
/transl_table=11
/product="2-deoxy-D-gluconate 3-dehydrogenase"
/protein_id="YP_003193914.1"
/db_xref="GI:260060834"
/db_xref="GeneID:8454601"
/translation="MKQKIVIVTGATSGLGYATAKKFCQAGHICYVLGRNPEKTRKTC
KELGPQARELVLDLSRLEDIPGAVRQVQEAAGRIDVLVNNAGINMKKPLLEVSDAEFN
QILQTNLHSVFSISREAGKVMKEQGQGNIVNISSMAAQYGLPYVVAYSASKTAIEGLT
RAMAVELAPMGIRVNCVAPGFIKTPMTAKALDSDPPRKDRVFARTPMGEMGLPEDIAD
TVFYLASEEARFITGVVLPVDGGNSIGF"
misc_feature complement(282409..283131)
/locus_tag="RB2501_04525"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(282415..283116)
/locus_tag="RB2501_04525"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(282577..282582,282586..282597,
282673..282675,282685..282687,282724..282732,
282811..282813,282874..282882,282958..282966,
283024..283032,283087..283098,283102..283104))
/locus_tag="RB2501_04525"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(282673..282675,282685..282687,
282724..282726,282808..282810))
/locus_tag="RB2501_04525"
/note="active site"
/db_xref="CDD:212491"
gene complement(283168..285468)
/locus_tag="RB2501_04530"
/db_xref="GeneID:8454602"
CDS complement(283168..285468)
/locus_tag="RB2501_04530"
/codon_start=1
/transl_table=11
/product="alpha-glucuronidase"
/protein_id="YP_003193915.1"
/db_xref="GI:260060835"
/db_xref="GeneID:8454602"
/translation="MKFTSIRPAPPVFTLLILFFLFSGQVLPKPGASDSREPHLADTA
RCLPEPNRAVVASPNPIPWGYDLWLNFEPLDDARLKDAYREAITGMYMEPVGATGQIV
YRELTEGLGSMLERPLESLPAPAGMKSAEAGLLLVATWDRLPRFIREIMDRPEIPAEG
FLIRQVRAGEKKHLVLTSADDAGLLYGAYRLLRLVQTHQPLDGIDLLDAPKTKLRMLN
HWDNLDRTVERGYAGFSIFNWHTLPELRDPRYADYARANASVGINATAVTNVNSNALV
LTAPYIRKAKALADIFRPYGIRLYLTARFSAPMEIGGLETADPLDPRVIAWWAAKAGE
LYAEIPDFGGFLVKANSEGQPGPQNYGRSHREGANMLADALAPYGGNVIWRAFVYSEE
DPDDRAKQAYTEFAPEDGKFRENVLLQVKNGPIDFQPREPVHPLFGAMPETPMLAEFQ
ITKEYLGFATHLVYLPRLFEEVLQTDTYREGPGSTVARVVDGSLHDKPLSGMAGVANI
GTDINWTGHPFGQADWYGFGRLAWDPNLDSGDIAEEWIRATFGNNPVVVSRVQALMMR
SREAVVNYMTPLGLHHIFDSSHHYGPGPWVDEHSRPEWNPVYYHQADSLGIGFDRTST
GSNAVAQYAPELAERYGDPATCPEEFLLWFHHLPWDYKLRDGHTLWEGLGLKYQEGID
TVSGMLSDWQGLKGLLPDAAYRDVEMRLGIQLQEARWWKDACMLYFQTFSGREFPEGM
EPPAHPLNYYKNLKFPYAPGIRPQWD"
misc_feature complement(283270..285279)
/locus_tag="RB2501_04530"
/note="Alpha-glucuronidase [Carbohydrate transport and
metabolism]; Region: AguA; COG3661"
/db_xref="CDD:33459"
misc_feature complement(284926..285270)
/locus_tag="RB2501_04530"
/note="Glycosyl hydrolase family 67 N-terminus; Region:
Glyco_hydro_67N; pfam03648"
/db_xref="CDD:202718"
misc_feature complement(283234..283926)
/locus_tag="RB2501_04530"
/note="Glycosyl hydrolase family 67 C-terminus; Region:
Glyco_hydro_67C; pfam07477"
/db_xref="CDD:203642"
gene 285687..287180
/locus_tag="RB2501_04535"
/db_xref="GeneID:8454603"
CDS 285687..287180
/locus_tag="RB2501_04535"
/codon_start=1
/transl_table=11
/product="xylulose kinase"
/protein_id="YP_003193916.1"
/db_xref="GI:260060836"
/db_xref="GeneID:8454603"
/translation="MYWIGYDIGSSSVKAALVSDADGSEVARVQYPKKEMPIDSPQPG
WGEQDPDLWWEQVRLATAELLKMPGIDPKAIRGIGISYQMHGLVVVDASLRPLRPSII
WCDSRAVGAGEKLLDLAGEEACRERLLNGPGNFTLSKLVWVRDNQPDVFSQIHKIMLP
GDYIALRFSGNATTTASGLSEGIMWDFRDDQPAGWLLEKAGISPDLLPEIVPTFGVQA
TLSEAGARETGLPEGIPILYRAGDQPNNALSLDVMQPGDVAATGGTSGVVYAVTDATR
TREMNRVNNFAHVNHTRKAPRIGKLLCINGTGIQYSWMQQQVSPNASYPEMNQLASEI
PVGCQGLRIYPFGNGAERMLGNARVGARIQGLNFNTHTRSHLYRAALEGIAFSFVYGM
EIMAADGVGLGRIKAGNDNLFRARTFAETIATLTGATIQMVATTGAVGAARAAAVAAG
AFGSMSEATATDKVQLEYAPLAGTEPYREAYADWKNELNNILKQHKP"
misc_feature 285687..287174
/locus_tag="RB2501_04535"
/note="Glycerol kinase [Energy production and conversion];
Region: GlpK; COG0554"
/db_xref="CDD:30900"
misc_feature 285690..287153
/locus_tag="RB2501_04535"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:213144"
misc_feature order(285705..285716,285720..285722,285726..285728,
286410..286412,286467..286478,286905..286907)
/locus_tag="RB2501_04535"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
gene 287177..288502
/locus_tag="RB2501_04540"
/db_xref="GeneID:8454604"
CDS 287177..288502
/locus_tag="RB2501_04540"
/note="catalyzes the interconversion of D-xylose to
D-xylulose"
/codon_start=1
/transl_table=11
/product="xylose isomerase"
/protein_id="YP_003193917.1"
/db_xref="GI:260060837"
/db_xref="GeneID:8454604"
/translation="MITTGDKEYFKNIGKIPFEGKESDNPLAFKYYDENQKVGDKTMK
EHFRFAVCYWHTFTGLGADPFGAPTQQFPWLENSDPVQQAKDKMDAAFEFITKIGAPY
YCFHDYDLIAEGPTLAESERRLDIITDYAREKMDASGVKLLWGTANCFGNPRYMNGAA
TNPDFKVLAAAGAQVKNALDATIKLDGENYVFWGGREGYMSLLNTDMKREQDHMARFL
HMARDYARKQGFKGVFFIEPKPMEPTKHQYDFDSATVLAFLSKYDLLDDFKLNIEVNH
ATLAQHTFEHELQVAADNGLLGSIDANRGDYQNGWDTDQFPVDVYELTQAMLVILEAG
GFQGGGVNFDAKIRRNSTDLEDIFYAHIGGMDAFARALLAAHAVRTQSDFLKMRKDRY
ASFDSGKGAEFEAGKLSLEDLHKFAGANQEIPRTSGRQELYENIINQFI"
misc_feature 287198..288499
/locus_tag="RB2501_04540"
/note="xylose isomerase; Provisional; Region: PRK05474"
/db_xref="CDD:180109"
misc_feature 287201..288499
/locus_tag="RB2501_04540"
/note="xylose isomerase; Region: xylose_isom_A; TIGR02630"
/db_xref="CDD:211758"
gene complement(288557..289672)
/locus_tag="RB2501_04545"
/db_xref="GeneID:8454605"
CDS complement(288557..289672)
/locus_tag="RB2501_04545"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193918.1"
/db_xref="GI:260060838"
/db_xref="GeneID:8454605"
/translation="MDPALQRTLELLLIVGIGLLLQKRLAGRQQLEGIKLIILNVALP
ATIFLALLKVELKPGLLLLPGLALAFNLAMFLAVRYALPLFAPRHGAPQRRTLALMLP
SLAPGLSCYPFIMAYMDESSLALAALADVGNKFFGLILLYLLAMHWYHQGGRPTDRKA
PVAKKLRGLFLSLVREPINLVIGTAIILLIAGLNLESLPGFIAAAINRFSVMMVALVL
LFIGMAVRVSLSDLRTIALLLSWRSGLALLFSSLMLLLLPALTPALALLVIVFPQSSC
SFWPYAHMHLVSEREKAETRTQPTFDNGFAVNLLACSLPFSSGMILLLFNFSETLAHT
WVLATAGLTLVALSLLPRIWQVALRKLRSAIPENVMP"
gene complement(289696..290886)
/locus_tag="RB2501_04550"
/db_xref="GeneID:8454606"
CDS complement(289696..290886)
/locus_tag="RB2501_04550"
/codon_start=1
/transl_table=11
/product="histidinol-phosphate aminotransferase"
/protein_id="YP_003193919.1"
/db_xref="GI:260060839"
/db_xref="GeneID:8454606"
/translation="MKPRTFNRRDWMRTTVLTAGGIGMIPVSGLCETPRAPLQINPAG
EALYSPFFREYLPKAPRPTALAAKLNANENPYGPSAKAREALGAAAANGNRYAWRDLM
GLIDSIAELEGVTPENIITGPGSSDLLEKTAMVFFRDGGNVVSADPSYMSLIQVAKAC
GADWKPVPLKTDWSHDLDAMEAAIDEQTRLVYICNPNNPTGTLTPADALLKFCDRVAD
QVPVFVDEAYLGFLEPEARQSMVSLVAKGKNVIVARTFSKIHGMAGLRVGYAVALPET
LERINAITRGGMGISGPSIAAAAASMSDEAFLAECRSLNSSVRKHVFETLQELGHQPV
PSYTSFMIFPIEMEGREFLSRMTALDVGVRAFRFMDQNWCRVSMGTRAEMDLFLDAVR
KTLV"
misc_feature complement(289711..290724)
/locus_tag="RB2501_04550"
/note="histidinol-phosphate aminotransferase; Region:
hisC; TIGR01141"
/db_xref="CDD:162223"
misc_feature complement(289708..290685)
/locus_tag="RB2501_04550"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature complement(order(290089..290091,290113..290118,
290122..290124,290203..290205,290293..290295,
290437..290439,290509..290517))
/locus_tag="RB2501_04550"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature complement(order(289993..289995,290002..290004,
290089..290097,290224..290226,290407..290409,
290506..290508))
/locus_tag="RB2501_04550"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature complement(290113..290115)
/locus_tag="RB2501_04550"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene complement(291074..294160)
/locus_tag="RB2501_04555"
/db_xref="GeneID:8454607"
CDS complement(291074..294160)
/locus_tag="RB2501_04555"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit alpha"
/protein_id="YP_003193920.1"
/db_xref="GI:260060840"
/db_xref="GeneID:8454607"
/translation="MYLNCHTYYSLRYGTFSEVDLLELARENGVSCLALTDINNTSAG
LNFVRRAPEFGVRPLLGIDFRNGVESCFVGLAKNNRGYMELNAFLSDHLHGKHPLPER
APAFSDAVVIYPFERVLLAELGDFAPHEYIGISVRDLRRLPFSHLVERRDRLVVLQPV
TFRNKRDFNAHRLLRAIDNNALLSKLPESEQAHPEDCMYALPNLAEVFAEYAFILENT
RALMEGCSIHFDFSENRQPQNLDTYTGSREEDEALLERLCEEGMPYRYSAPGPQIRKR
LAKELELIRAKGFVSYFLINWDIVSEARRRGFFYVGRGSGANSIVAYLLRITDVDPIE
LDLYFERFINLFRTNPPDFDIDFSWRDREAITRYIFDRFQHVALLGTYVTFRERGIIR
ELGKVFGLPKAEIDQLCDGSYESSRLDGVARLVLRYGQLIRGMPNYLSVHAGGILIAG
KPIHWFSATHLPPKGFATTQFDMVIAEDAGLYKFDILAQRGLAKIKEALEIARQNQPE
ATRGVDIHDIRKIKEDPAVNELIRSAQCMGCFYVESPAMRMLLKKLEVDNYLGLVAAS
SIIRPGVSKSGMMREYILRHRDPERVKQAHPVLLDIMPDTYGVMVYQEDVIKVAHYFA
GLSLGEADVLRRGMSGKFRSREEFERVKAAFVANCRRKGYAESLISEIWEQVASFAGY
AFAKGHSASYAVESYQSLFLRAYFPLEYLVAVLNNGGGFYRPECYVHEARMLGARVHP
PCINRSGVANRIEGADIYLGLMYLRELEGRVMDRIVRQRQLGGAFSDLEDFLDRVPIS
IEQLSILVRIDAFRSTGAEKHRLLWKAHLLLSRGGVADHPRLFPPQQTKFRIPSLHGT
ELETAFTQMELLGFCLCSPFDLLEEPPANRNGCRHFPEYMGRYIDIYGYLVTVKNTKT
HNGKRMHFATFIDLYGEVFDTVLFPPVAARYRFRGRGIYRSYGKVVSEFGFLSLEVLR
MEKQGYIPDPRYADMKTAAKRLSLRQQEDALAKSEGKSQPESQPESEPGRPRAKGS"
misc_feature complement(291116..294160)
/locus_tag="RB2501_04555"
/note="DNA polymerase III, alpha subunit [DNA replication,
recombination, and repair]; Region: DnaE; COG0587"
/db_xref="CDD:30932"
misc_feature complement(291239..291457)
/locus_tag="RB2501_04555"
/note="DnaE_OBF: A subfamily of OB folds corresponding to
the C-terminal OB-fold nucleic acid binding domain of
Thermus aquaticus and Escherichia coli type C replicative
DNA polymerase III alpha subunit (DnaE). The DNA
polymerase holoenzyme of E. coli contains...; Region:
DnaE_OBF; cd04485"
/db_xref="CDD:72957"
misc_feature complement(order(291254..291262,291281..291289,
291308..291310,291347..291349,291353..291361,
291380..291382,291386..291397,291437..291445))
/locus_tag="RB2501_04555"
/note="generic binding surface I; other site"
/db_xref="CDD:72957"
misc_feature complement(order(291239..291241,291293..291295,
291299..291301,291305..291307))
/locus_tag="RB2501_04555"
/note="generic binding surface II; other site"
/db_xref="CDD:72957"
gene complement(294237..295451)
/locus_tag="RB2501_04560"
/db_xref="GeneID:8454608"
CDS complement(294237..295451)
/locus_tag="RB2501_04560"
/codon_start=1
/transl_table=11
/product="DNA polymerase IV"
/protein_id="YP_003193921.1"
/db_xref="GI:260060841"
/db_xref="GeneID:8454608"
/translation="MQKTILHLDLDTFFVSVERKLDSRLKNKPILVGGLSDRGVVAAC
SYETRGYGVHSGMPMRMARELCPEAVIIRGNAGTYSKHSDEVTDIIREQVPLFEKSSI
DEFYADLSGMDRFFGCYRYASELRERIIRESGLPISFGLSVNKVVSKVATGEAKPNNQ
LKIDFGYEKPFLAPLSIKKIPMVGDKTYQTLRNLGLRQVRTLQEMPLDVVQRVLGANG
TVIWKRANGIDNRPVIPFCERKSISTERTFDRDTIDVVRLRGILTAMTENLAFQLRRG
GKLTACVTVKLRYSDFNTYSRQLRIPYTSADHILIPRVMDLFERLYDRRLLVRLIGVR
FSHLVPGNYQIDLFDDTQEALNLYAAMDRIRERFGDKSVLRASGMGARTIGRMQNPFN
GQPPTVLAHRKQ"
misc_feature complement(294420..295445)
/locus_tag="RB2501_04560"
/note="Nucleotidyltransferase/DNA polymerase involved in
DNA repair [DNA replication, recombination, and repair];
Region: DinP; COG0389"
/db_xref="CDD:30738"
misc_feature complement(294438..295436)
/locus_tag="RB2501_04560"
/note="DNA Polymerase IV/Kappa; Region: PolY_Pol_IV_kappa;
cd03586"
/db_xref="CDD:176459"
misc_feature complement(order(294984..294986,295143..295145,
295305..295307,295314..295316,295323..295328,
295410..295418,295422..295427))
/locus_tag="RB2501_04560"
/note="active site"
/db_xref="CDD:176459"
misc_feature complement(order(294441..294443,294450..294452,
294462..294467,294552..294554,294558..294569,
294636..294638,294711..294734,294801..294806,
294891..294911,295005..295007,295140..295145,
295149..295151,295278..295280,295350..295352))
/locus_tag="RB2501_04560"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:176459"
misc_feature complement(<294345..294446)
/locus_tag="RB2501_04560"
/note="Domain of unknown function (DUF4113); Region:
DUF4113; pfam13438"
/db_xref="CDD:205616"
gene complement(295695..296024)
/locus_tag="RB2501_04565"
/db_xref="GeneID:8454609"
CDS complement(295695..296024)
/locus_tag="RB2501_04565"
/codon_start=1
/transl_table=11
/product="transmembrane protein"
/protein_id="YP_003193922.1"
/db_xref="GI:260060842"
/db_xref="GeneID:8454609"
/translation="MQYTFGLVPIVAGLDKFTNILTDWSQYVSAGLLDLIPVEAGVFM
SVVGIVEIAAGALVLLRPMIGGIVVAAWLVLIALSLLLTWSFVDVAVRDLVMAVGAFS
LVTLSRK"
gene complement(296172..296528)
/locus_tag="RB2501_04570"
/db_xref="GeneID:8454610"
CDS complement(296172..296528)
/locus_tag="RB2501_04570"
/codon_start=1
/transl_table=11
/product="carboxymuconolactone decarboxylase"
/protein_id="YP_003193923.1"
/db_xref="GI:260060843"
/db_xref="GeneID:8454610"
/translation="MSTTSDNLFPGSTRGLFNKQAALTPETSDAWRTFSQTVFKPGAL
DVRTKQLIALAVGHATRCPYCIRAHTAQALKAGASAKEISEAIWIAAEMSAGAASAHA
AIAFDEMERQGYGENR"
misc_feature complement(<296274..296456)
/locus_tag="RB2501_04570"
/note="Carboxymuconolactone decarboxylase family; Region:
CMD; pfam02627"
/db_xref="CDD:202318"
gene complement(296525..297235)
/locus_tag="RB2501_04575"
/db_xref="GeneID:8454611"
CDS complement(296525..297235)
/locus_tag="RB2501_04575"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma-70 factor"
/protein_id="YP_003193924.1"
/db_xref="GI:260060844"
/db_xref="GeneID:8454611"
/translation="MGNNTFMDIQTTPKEKKAGDIASRPDPWIIEAVLGGDKELFEVL
MRRHNELMYRTIRSYLSREEDIEDCMQEAYIKAYRKLRQFNNESQFSTWLIRIGINEA
LMRIRKGKQMLTVEINQDAEAPQIPDKSIMNPERITMHRESLAYIEHAIDALPRKYKI
VYMLKEVEGLEIKEISKSLDLSNSNVKVRLHRARNMMKEYLFKATDTRTVFEFGNARC
DRVVEGVLTWMRNESRAL"
misc_feature complement(296633..297121)
/locus_tag="RB2501_04575"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:211770"
misc_feature complement(296912..297106)
/locus_tag="RB2501_04575"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature complement(296642..296806)
/locus_tag="RB2501_04575"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(296654..296656,296660..296665,
296669..296677,296681..296686,296690..296692,
296720..296725,296741..296743,296771..296773))
/locus_tag="RB2501_04575"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 297331..298005
/locus_tag="RB2501_04580"
/db_xref="GeneID:8454612"
CDS 297331..298005
/locus_tag="RB2501_04580"
/codon_start=1
/transl_table=11
/product="flavodoxin reductase"
/protein_id="YP_003193925.1"
/db_xref="GI:260060845"
/db_xref="GeneID:8454612"
/translation="MIQMNYHVQIKSISRLTHDTLCLRLSKPHGYRYGIGQAIEVAID
NPGYEQQFRPFTLTSLPFDPYLELIVKVYPDHGGFTQALSRLGENGPLIITAAWDSYD
YRGEGVFIAAGSGITPFIPMIRQLSLSGRIPGHTLLYANKTEADIIHKQALNKALGSR
FINILSREYHSKLDYGRLDQAYLKDKVSDFSEHFYICGPEAFSGAIKGYLINQGAAEA
QIQIGY"
misc_feature 297346..297999
/locus_tag="RB2501_04580"
/note="Ferredoxin reductase-like proteins catalyze
electron transfer between an NAD(P)-binding domain of the
alpha/beta class and a discrete (usually N-terminal)
domain which varies in orientation with respect to the
NAD(P) binding domain. The N-terminal region...; Region:
FNR_like_1; cd06196"
/db_xref="CDD:99793"
misc_feature 297352..297996
/locus_tag="RB2501_04580"
/note="Flavodoxin reductases (ferredoxin-NADPH reductases)
family 1 [Energy production and conversion]; Region: Hmp;
COG1018"
/db_xref="CDD:31221"
misc_feature order(297442..297444,297487..297498,297535..297537,
297541..297543,297547..297549,297559..297561,
297565..297570,297670..297672)
/locus_tag="RB2501_04580"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99793"
misc_feature order(297487..297489,297493..297498)
/locus_tag="RB2501_04580"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99793"
misc_feature order(297559..297561,297568..297570,297577..297579,
297595..297597)
/locus_tag="RB2501_04580"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99793"
misc_feature order(297655..297657,297667..297678,297682..297684)
/locus_tag="RB2501_04580"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99793"
misc_feature order(297670..297675,297748..297756,297922..297927)
/locus_tag="RB2501_04580"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99793"
gene 298163..298693
/locus_tag="RB2501_04585"
/db_xref="GeneID:8454613"
CDS 298163..298693
/locus_tag="RB2501_04585"
/codon_start=1
/transl_table=11
/product="GTP cyclohydrolase I"
/protein_id="YP_003193926.1"
/db_xref="GI:260060846"
/db_xref="GeneID:8454613"
/translation="MQALGMDLSDTSLADTPMRVARMYVNETFRGLSAKNFPRISFFE
KAPGTPEMIVVNDITLYSYCEHHFVPFFGKVHVAYIPGDRLLGLSKVNRVVDYLSRKP
HLQERLTREIADTLSELLQTRHVAVFVEAQHLCVASRGVRDAKSITRTGCYLGQFQNT
HTRAEFMASLKMQGSL"
misc_feature 298163..298675
/locus_tag="RB2501_04585"
/note="GTP cyclohydrolase I; Provisional; Region: folE;
PRK09347"
/db_xref="CDD:181789"
misc_feature 298163..298663
/locus_tag="RB2501_04585"
/note="GTP cyclohydrolase I; Provisional; Region:
PLN03044"
/db_xref="CDD:178607"
misc_feature order(298373..298375,298379..298381,298547..298549,
298616..298618)
/locus_tag="RB2501_04585"
/note="active site"
/db_xref="CDD:29764"
gene 298744..299268
/locus_tag="RB2501_04590"
/db_xref="GeneID:8454614"
CDS 298744..299268
/locus_tag="RB2501_04590"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193927.1"
/db_xref="GI:260060847"
/db_xref="GeneID:8454614"
/translation="MKKLVIICCLGLFASATLLGQDKTNLSDAEIASVAVVANQIDIE
FAEMAIKKSRNAEILDFAKRMVQDHQAVIGQASALVSKLGVQPQDNPISQSMLADARL
TQKELRKAPRKAFDARYIANEVAYHKAVIEAIRDVLVPNTENGELKELLQTVLPALEA
HLGHAEMVQKKLGK"
misc_feature 298822..299241
/locus_tag="RB2501_04590"
/note="Domain of unknown function (DUF4142); Region:
DUF4142; pfam13628"
/db_xref="CDD:205805"
gene 299268..299609
/locus_tag="RB2501_04595"
/db_xref="GeneID:8454615"
CDS 299268..299609
/locus_tag="RB2501_04595"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193928.1"
/db_xref="GI:260060848"
/db_xref="GeneID:8454615"
/translation="MKIVYGLLFPLGFWATLITGSDREAIPDARLPKRHTVEIFRMKF
NPAELHVNPGDTVVWVNKDFVPHDVTEEKTRAWTSHPFGQNESWSRVITEDVDYFCNL
HKVMKGTIVVE"
misc_feature <299370..299606
/locus_tag="RB2501_04595"
/note="Plastocyanin [Energy production and conversion];
Region: PetE; COG3794"
/db_xref="CDD:33589"
gene 299683..301035
/locus_tag="RB2501_04600"
/db_xref="GeneID:8454616"
CDS 299683..301035
/locus_tag="RB2501_04600"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193929.1"
/db_xref="GI:260060849"
/db_xref="GeneID:8454616"
/translation="MKKKYIAAAGSLLLAAGLLTRCTKTETITETITETVTDTIIQTE
IDTLFLDPSLVAEGKEIFRHDTFGDEAFWSGVLHLDKAILGEANGGYGDGVSPATALV
VGLKVDAEALPSEVVSAIQAGQVDLEDPATTVELLRLNSVVGVKGNFDDNGDLSSIGI
TCALCHSTVDDSFADGIGKRLDGYPNRDLNVGVIVSLTDNAQFLADLLHVDEATVRTV
LTGWGPGKFNAGLMADGIATKPDGSIAANLLPAAYGLQGVHLATYTGWGDVTYWNAFV
ANLEMHGQGNFTDARLNDPIQFPIAAENNFGNVTNSPDLITGKLPALQAYQLSLKAPI
PPVGSFDAAAAERGKVVFEGVAQCATCHIAPIFTDAGQNLHTAEEIGIDDFEAKRSPT
GKYRTTPLRGLWARTQGGFYHDGRFATLAEVIDHYDSHFQLNLSTADKNDLSEYLMSL
"
misc_feature <300127..300342
/locus_tag="RB2501_04600"
/note="RNase PH-like 3'-5' exoribonucleases; Region:
RNase_PH; cl03114"
/db_xref="CDD:207843"
misc_feature 300436..301032
/locus_tag="RB2501_04600"
/note="tryptophan tryptophylquinone biosynthesis enzyme
MauG; Region: TTQ_mauG; TIGR03791"
/db_xref="CDD:163503"
gene 301243..302040
/locus_tag="RB2501_04605"
/db_xref="GeneID:8454617"
CDS 301243..302040
/locus_tag="RB2501_04605"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193930.1"
/db_xref="GI:260060850"
/db_xref="GeneID:8454617"
/translation="MKNSKIIFTTLFAFGVYFGLDDLYFGTVRNGIDQVVNQRGTSHN
LAYLLSGIPLYLGLLIMHRPQDFFKVLGLSGPLGRAVRFAFLCTLPMVLGYAILFSPS
REVTLNGLLISGLAAAFFEEVFYRGFLFGQLYRYTRLGFIPAVALGALLFAAIHLYQS
QDLWISLGVFATTFLGAVVFAWTYAEWDHNIWVPVMLHLFMNLAWMLFAVSDNALGGV
YANVFRIVTIGAIIGLTLFYKRRRNIPLEVTRHTLWLKPGQPVGYTP"
misc_feature 301570..301851
/locus_tag="RB2501_04605"
/note="CAAX protease self-immunity; Region: Abi;
pfam02517"
/db_xref="CDD:202269"
gene 302037..305207
/locus_tag="RB2501_04610"
/db_xref="GeneID:8454618"
CDS 302037..305207
/locus_tag="RB2501_04610"
/codon_start=1
/transl_table=11
/product="Cytochrome c assembly protein"
/protein_id="YP_003193931.1"
/db_xref="GI:260060851"
/db_xref="GeneID:8454618"
/translation="MNRVRPTHFTSRILAYLGSTRLMALLFLALGVAMGWATFIENDL
GTPAAQALVYRAWWFEGLMLLFVVNFLLNIRKYGLEKRRKWPVLLVHASLVIIILGAF
VTRYFGYTGLMTIREGEVSNTVYSDEAYLRVAMEEPRGSTPTRRIIERPVLLSGATPW
HNRFELHTEFNGSPIQVSYRDFIPDARYRFREQTGGALYLRIVETHRDERHEHYLREG
VKTNFHGHLFTLNAPQPGAFNFTYISDTLYLSPFRAGSHTDMVSRESTPLPRRVNERA
RRGLYRFGDLQFALSAPPRAGILLLEPARAEQRGESPDALLLQIRAGDSVRDTVVLGQ
ARAAGEPVHLNIDGKDFELSYGSKLHSLPFALELLDFDAQKYPGTQTGYSGFKSRVLV
RDPDRTFEADIFMNHVLDHGGFRFYQASFHADEKGTILSVNHDAAGTLITYTGYFLLY
LGLLGVLFSRHTRFARVVRQLNAHAASRAGVLGLTLTLSGALGAQQSPDPTHPEIQAR
LDSIVDYYAPPPDHTSRFAGLVVQDPDGRMKPMDSYASEILRKLSKREVYRNLTADQV
VHSMLQLPEIWFNVPLIYLGKDSRPLRNLLGISVPLDRVPLVAFFRGDGGYKIEAEVK
TAHRARIPSQFQKDLIAVDGRVHLLHAILSGRAMRLFPLPGHDMNLWISTAELGEKAQ
TLTAPDSTFIAQALPIYFDACSTAARTGDYTEATTILRHLERFQRHHGAEVIPNPLKI
RTEMLYNRLNLFKNLVQAYLFGGLLLLALAIRGIFRASRPLRLGIRLLMAVLWLCYAI
HTAGLGLRWYIAGHAPWSDAYETMIYIAWATMLFGIYLGRKSALAMASTAFVVSVILM
VAHWNWLDPAVANLQPVLNSYWLMIHVAIIVASYGPFTVAMILCLLVLAGMVFLNRRN
RTSLSAPLRQLLLLAELAMTMGLVMLTIGNFLGGQWANESWGRYWAWDPKETWALVSI
LVYALIIHMRLVPGLRGRWVFAMMGVVGYSAILMTYFGVNFYLSGLHAYASGEQLVTP
SVVFYAIGVVGILGVVSYVKAHRHHV"
misc_feature 304413..305102
/locus_tag="RB2501_04610"
/note="cytochrome c-type biogenesis protein CcsB; Region:
cytochr_II_ccsB; TIGR03144"
/db_xref="CDD:211791"
gene complement(305251..306054)
/locus_tag="RB2501_04615"
/db_xref="GeneID:8454619"
CDS complement(305251..306054)
/locus_tag="RB2501_04615"
/codon_start=1
/transl_table=11
/product="flavodoxin reductase"
/protein_id="YP_003193932.1"
/db_xref="GI:260060852"
/db_xref="GeneID:8454619"
/translation="MEVYAPDVLSDVTPGAYTNPIDKLTKQHTMRGFIFPYQVSLLGI
ERVNQDIFRLQLEKPDGYTFRPGQAIDVSIAEPGHELDVAPFTLFNRPADPYLELIVK
IRPNPGSLTGSLSRLWPGATLQITAPWEVYRYIGPGVFLAAGTGITAFLPLLRELAAQ
GKQLYPDHHLVYAISEPSDMLYEEELASLLSHGFTCVVSRSPVPTGKGWYTGHISENL
LRQVVHKDASNYYVCGPRSFEKSIHGLLLGMGVDAAHVQTGYPIYKEAL"
misc_feature complement(305284..305949)
/locus_tag="RB2501_04615"
/note="Flavodoxin reductases (ferredoxin-NADPH reductases)
family 1 [Energy production and conversion]; Region: Hmp;
COG1018"
/db_xref="CDD:31221"
misc_feature complement(305278..305946)
/locus_tag="RB2501_04615"
/note="Ferredoxin reductase-like proteins catalyze
electron transfer between an NAD(P)-binding domain of the
alpha/beta class and a discrete (usually N-terminal)
domain which varies in orientation with respect to the
NAD(P) binding domain. The N-terminal region...; Region:
FNR_like_1; cd06196"
/db_xref="CDD:99793"
misc_feature complement(order(305620..305622,305722..305727,
305731..305733,305743..305745,305749..305751,
305755..305757,305794..305805,305848..305850))
/locus_tag="RB2501_04615"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99793"
misc_feature complement(order(305794..305799,305803..305805))
/locus_tag="RB2501_04615"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99793"
misc_feature complement(order(305695..305697,305713..305715,
305722..305724,305731..305733))
/locus_tag="RB2501_04615"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99793"
misc_feature complement(order(305608..305610,305614..305625,
305635..305637))
/locus_tag="RB2501_04615"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99793"
misc_feature complement(order(305350..305355,305530..305538,
305617..305622))
/locus_tag="RB2501_04615"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99793"
gene 306476..307324
/locus_tag="RB2501_04620"
/db_xref="GeneID:8454620"
CDS 306476..307324
/locus_tag="RB2501_04620"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_003193933.1"
/db_xref="GI:260060853"
/db_xref="GeneID:8454620"
/translation="MPEETSQTTFKITDAPIDDAQVEGVFVTLADVRVDGQSLEGFSK
TTIELSALVEGQTLTLGELDLAADSYSSLELVLDTQTDAAGNTPANYIALANGTKEEL
EASAETIRVTDGFEVIAGAANEIVIDFDLRKTITKSQGALEADYAFASTSQLEAGIRV
VNEQATGEIEGTVTDSQDYAETIIVYAYPEGTFNAEAETQGEVQFANAVTSSKVSGLD
NSYSLNFLEEGTYELVFASYEETEGSVNFATLLEVESTTGLNLGALTLSAALQLSANV
TVTGTL"
misc_feature 306485..306880
/locus_tag="RB2501_04620"
/note="Domain of unknown function (DUF4382); Region:
DUF4382; pfam14321"
/db_xref="CDD:206489"
gene 307520..307705
/locus_tag="RB2501_04625"
/db_xref="GeneID:8454621"
CDS 307520..307705
/locus_tag="RB2501_04625"
/codon_start=1
/transl_table=11
/product="CsbD-like protein"
/protein_id="YP_003193934.1"
/db_xref="GI:260060854"
/db_xref="GeneID:8454621"
/translation="MTNEELKGKWNQVKGKFKQRYGNLTDDDVTFSEGKFDEMLGRIQ
EKTGKRKEEIRKEIESW"
misc_feature 307529..307663
/locus_tag="RB2501_04625"
/note="CsbD-like; Region: CsbD; pfam05532"
/db_xref="CDD:203270"
gene 308137..309198
/locus_tag="RB2501_04630"
/db_xref="GeneID:8454622"
CDS 308137..309198
/locus_tag="RB2501_04630"
/codon_start=1
/transl_table=11
/product="bacteriophage integrase"
/protein_id="YP_003193935.1"
/db_xref="GI:260060855"
/db_xref="GeneID:8454622"
/translation="MAVHLRSRKLKSGDRSLYLDIHHHGDRWREFLKIRISPKDSDRT
EKKRIAERIRANRELELLSQSTGHIPSHLTNLNFFDFAENYLSNYPFKDVRIVHNAVQ
KFKVALGNTRLTFAQITPKVMEAFKDYLIHESGLTGETAHNYFTRFKKILKAAKIKGY
LREMPTADIRFANPNKDDTIRKQVLDTKELQILATTHCGNSEVKRAFLFACYTSLGLA
EIKLLKWSNINKGRLITYRNKTGEIINNRLNPTALIILGEPKGRNEFVFQLQKLSNNG
VNKAIEYWVKRAGIQKHITFYCARHTFACQLLIHGANLKTVADAMGHSSTQSTLKYLN
YVQKLQDEAIDKLPVLQID"
misc_feature 308143..308529
/locus_tag="RB2501_04630"
/note="Protein of unknown function (DUF3946); Region:
DUF3946; pfam13102"
/db_xref="CDD:205283"
misc_feature <308473..309177
/locus_tag="RB2501_04630"
/note="DNA breaking-rejoining enzymes, C-terminal
catalytic domain. The DNA breaking-rejoining enzyme
superfamily includes type IB topoisomerases and tyrosine
recombinases that share the same fold in their catalytic
domain containing six conserved active site...; Region:
DNA_BRE_C; cl00213"
/db_xref="CDD:211431"
misc_feature order(308782..308787,308851..308853,309019..309027,
309130..309132)
/locus_tag="RB2501_04630"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29495"
misc_feature order(308782..308784,308851..308853,309025..309027,
309034..309036,309103..309105,309130..309132)
/locus_tag="RB2501_04630"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:29495"
misc_feature order(308782..308784,309025..309027,309034..309036,
309103..309105,309130..309132)
/locus_tag="RB2501_04630"
/note="active site"
/db_xref="CDD:29495"
gene complement(309577..309774)
/locus_tag="RB2501_04635"
/db_xref="GeneID:8454623"
CDS complement(309577..309774)
/locus_tag="RB2501_04635"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193936.1"
/db_xref="GI:260060856"
/db_xref="GeneID:8454623"
/translation="MDEYAFKTIIDKDNNTILGAHLIGPHCEETINLFAMAIKTKMTI
SDLRTMIFSYPTMASDLTYML"
misc_feature complement(309583..>309759)
/locus_tag="RB2501_04635"
/note="Pyridine nucleotide-disulphide oxidoreductase,
dimerisation domain; Region: Pyr_redox_dim; pfam02852"
/db_xref="CDD:202431"
gene complement(310239..312050)
/locus_tag="RB2501_04640"
/db_xref="GeneID:8454624"
CDS complement(310239..312050)
/locus_tag="RB2501_04640"
/codon_start=1
/transl_table=11
/product="metal transport-related, exported protein"
/protein_id="YP_003193937.1"
/db_xref="GI:260060857"
/db_xref="GeneID:8454624"
/translation="MNKNIIYIGTALIVGLLAGYFIFSISAEDEIAVKDLSDMSDTHD
HSGETAEQMWTCSMHPQIMQPEPGDCPICGMDLIPADTGTEGLSANEIRMTENAMALA
NIRTTVVGVGGMDGNSLKLSGKIRENEEANAVQATYFGGRIERLYVNYAGERVAKGRL
LATIYSPELVSAQQELLTATSLKESQPALYKAVRNKLKLWKLSDKQINGIEESGQVQE
NFPVYATVSGTVTEKLVEEGDYVKQGQPLYKIANLNSVWAVFDAYENQIASLKTGQII
KLTTNAYPNKEFTAKVSFVDPLLNSTTRTVMVRAVLNNSEGLLKPGMFVEGRIDMPND
ESGKVISVPSTAVMWTGERSVVYVKTNPDEPIFEMREVSLGNTNGESFTILSGLEGGD
EIVTNGTFTVDAAAQLQGKKSMMNAKGGKTMTGHEGHLGMQPESSETSEPTVDHAKMD
KRLKVSNNFQEQLKVVFEGYTLLKDALVADNAGKAQSSAKEIGKSLDGVDMKLLENDK
AHNHWMTLQKEIRASANAIAIATEIAEQRSHFKHLSAHMISTIQLFGINQTVFSNYCP
MADSNNGAYWVSLEKEIRNPYYGEEMLTCGEITATLR"
misc_feature complement(310845..311735)
/locus_tag="RB2501_04640"
/note="RND family efflux transporter, MFP subunit; Region:
RND_mfp; TIGR01730"
/db_xref="CDD:162505"
misc_feature complement(311301..>311390)
/locus_tag="RB2501_04640"
/note="The biotinyl-domain or biotin carboxyl carrier
protein (BCCP) domain is present in all biotin-dependent
enzymes, such as acetyl-CoA carboxylase, pyruvate
carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
carboxylase, geranyl-CoA carboxylase; Region:
biotinyl_domain; cd06850"
/db_xref="CDD:133459"
misc_feature complement(310251..310862)
/locus_tag="RB2501_04640"
/note="Protein of unknown function (DUF3347); Region:
DUF3347; pfam11827"
/db_xref="CDD:152263"
gene complement(312079..312480)
/locus_tag="RB2501_04645"
/db_xref="GeneID:8454625"
CDS complement(312079..312480)
/locus_tag="RB2501_04645"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193938.1"
/db_xref="GI:260060858"
/db_xref="GeneID:8454625"
/translation="MYITMYLNTYEWDHVWFSLTRFYMVCLGIAAMAIIMFVAMRGMY
QNKTKNVAIVLGSIILFTGALILVREQRSTVGDILWMKAMIPHHSIAILTSERADLKD
PEVKKLAEEIIRAQEREISEMKAMINRLQEE"
misc_feature complement(312091..>312252)
/locus_tag="RB2501_04645"
/note="Domain of unknown function (DUF305); Region:
DUF305; cl17794"
/db_xref="CDD:248348"
gene complement(312592..313299)
/locus_tag="RB2501_04650"
/db_xref="GeneID:8454626"
CDS complement(312592..313299)
/locus_tag="RB2501_04650"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193939.1"
/db_xref="GI:260060859"
/db_xref="GeneID:8454626"
/translation="MVSRKTAKWIRKTHRYLGLFLGIQFLIWTISGMYFSWTDIDEIH
GDHYKKASPVQTSFNDLLGTSQLATKEPVQSLELLEIANEPYYWINEAQLYNARTGRK
KNGISKEEAQQVASRYMLADLKIAEIQRIDTVDKHHEYRGRPLPAYEISYETPQNLKA
YVAIENGAFQTVRHRDWRWFDFLWMTHTMDYQGRDDFNTVLLRAFSLLGLITVLSGFV
LWYISSLSIRKLKKKFK"
misc_feature complement(313183..313278)
/locus_tag="RB2501_04650"
/note="PepSY-associated TM helix; Region: PepSY_TM_3;
pfam13706"
/db_xref="CDD:205881"
gene complement(313301..313708)
/locus_tag="RB2501_04655"
/db_xref="GeneID:8454627"
CDS complement(313301..313708)
/locus_tag="RB2501_04655"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193940.1"
/db_xref="GI:260060860"
/db_xref="GeneID:8454627"
/translation="MKNMIVVFGIFLIASCKQECKGPKENVTKEVETVSQAAESDKKK
PFSPHTETMTMVGDAQIPIDYSSPGVRNRKIFDGLLPFNASDVGLRLKVTPKTTEEIK
EHLEYRIVKATETSGTISMSWKKVSIEFPFKIE"
misc_feature complement(<313460..313570)
/locus_tag="RB2501_04655"
/note="Protein of unknown function (DUF2911); Region:
DUF2911; pfam11138"
/db_xref="CDD:151582"
misc_feature complement(313313..>313477)
/locus_tag="RB2501_04655"
/note="Protein of unknown function (DUF2911); Region:
DUF2911; pfam11138"
/db_xref="CDD:151582"
gene complement(313735..314487)
/locus_tag="RB2501_04660"
/db_xref="GeneID:8454628"
CDS complement(313735..314487)
/locus_tag="RB2501_04660"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193941.1"
/db_xref="GI:260060861"
/db_xref="GeneID:8454628"
/translation="MKHTYHIQGMTCNGCRTSVEDKLSKVSGVTNASVNLEKEEAVIQ
MDSYIDTATFQKVLSEKYTISEKRAEKNALVSTDNDANNFFAKGETEKSKLQQLKPLL
IILGYIAIATILLNYQRENWNSAMLDFMGLFFIVFSFFKILDLKGFPDSFRMYDPLAK
VVPAYAWVYPFIESALGLMFLIRFEIPIALIATLVILGITTVGVTKILLDKKSIQCAC
LGTALKLPMTEATFIENAIMIAMAVVMLTRIL"
misc_feature complement(314308..314478)
/locus_tag="RB2501_04660"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:29471"
misc_feature complement(order(314443..314445,314452..314460))
/locus_tag="RB2501_04660"
/note="metal-binding site [ion binding]"
/db_xref="CDD:29471"
gene complement(314490..315656)
/locus_tag="RB2501_04665"
/db_xref="GeneID:8454629"
CDS complement(314490..315656)
/locus_tag="RB2501_04665"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193942.1"
/db_xref="GI:260060862"
/db_xref="GeneID:8454629"
/translation="MALWAFILGYIISSMIQIFVTEKRMQRTMGKDESKSVLLGTFFG
FISSSCSFAALASAKSLFKKGASFVSSVAFLLASTNLVIELGIIISIFLGWQFVVGEY
MGGLLLILISWILIRTVNPIKLIEEARKNLEGQEDDEMSDNQDWKKQIQQENSWARVA
KKYKMEWQMVWKDVTVGFTIAGIVAAFVPDSFFQTLFINSGQGNTDFTFLEILEHVIV
GPVAAFLTFIGSMGNIPLAALLFGKGVSFAGVMAFIFSDLVVFPVLRINAKYYGWKMS
IFILFLLFTALIVASLVLHYSFDLMSILPDPSQVKFQDKDHFKIDYTFYLNISFLAIS
AFLIYLGFFKRKDVEHSMSEMAPKSPFLESVLKYAAYICYVWLVGGLIVKFFIK"
misc_feature complement(314832..315653)
/locus_tag="RB2501_04665"
/note="Predicted permease; Region: DUF318; pfam03773"
/db_xref="CDD:112580"
gene complement(315730..316200)
/locus_tag="RB2501_04670"
/db_xref="GeneID:8454630"
CDS complement(315730..316200)
/locus_tag="RB2501_04670"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193943.1"
/db_xref="GI:260060863"
/db_xref="GeneID:8454630"
/translation="MRKLTTILTLFAITTSQVYCQNAKKEKEAVLKVMKSYKEALQNL
TTEGTYELFASDSEVFESGGVEGSYAHYIEHHLGPELEHFKKFDFSDYQIDVEVDLPY
AFTTETYIYTIVLNPNDKGEGRTIKKKGVATSILKRVDGKWQIIKTHSSSRNAK"
gene complement(316205..316762)
/locus_tag="RB2501_04675"
/db_xref="GeneID:8454631"
CDS complement(316205..316762)
/locus_tag="RB2501_04675"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193944.1"
/db_xref="GI:260060864"
/db_xref="GeneID:8454631"
/translation="MSEEKDIETTAAFYWQLFNSSKYVLLIVLLATAIGLYVLPNIDA
SYVVIILLALTLSKIGFIIALSFNQLMKIIGQSHLLSHVLVLFGYLIILIVFSFAIDY
TALHLIDSAHFKINNSSGSNGLLAFFNMSYFSLITFSSVGYGDIVPITVTAKTLVVLE
VALRFFVLVFGIANVNRIRVNNLKT"
misc_feature complement(316238..>316384)
/locus_tag="RB2501_04675"
/note="Ion channel; Region: Ion_trans_2; cl11596"
/db_xref="CDD:209363"
gene complement(316759..318264)
/locus_tag="RB2501_04680"
/db_xref="GeneID:8454632"
CDS complement(316759..318264)
/locus_tag="RB2501_04680"
/codon_start=1
/transl_table=11
/product="glutamate synthase"
/protein_id="YP_003193945.1"
/db_xref="GI:260060865"
/db_xref="GeneID:8454632"
/translation="MRRGFIIMSVLLVLVLAAMLILYPLWWGVALIIIPLLILGLIDY
CQKSNNIRRTYPLFGRITNLLEKQRHVFQEIVLLNRAEGKPFNWIQKEIIYKRAADAN
KSQPFGTQIPYDKVGREWFTHSTYPVKEVNDDFRVTVGSSLCTQPYSSSILNLSGMSY
GSISKNATLALNGGAKIAGFAQNTGEGGFTPYHQEYGADIIFQIGTGYFGCRTKEGNF
DTEKFRDIALHEVVKMIEIKISQGAKPGFGAILPAKKNTEEIAKFRVVEKGKQILSPP
HHSAFGSDEEMIFFIDKLRKLSNGKPIGIKLCIGQKDEFDSMAQSLAKNQNYPDFIAI
DGAEGGTGAAHMESLHWAGLPIVEAIHFAHSTLVKHKIRDEIKLMAAGKIISAFDIYR
MLALGADACYSARGMMFALGCVQSLKCNLDKCPTGITTMEPSRVKSLVVEDKKAKVAN
YHKNTMEAFKELLGSMGLENRKGIQKKYIVRRINETETKTYDEIFVNPSKE"
misc_feature complement(316819..318051)
/locus_tag="RB2501_04680"
/note="Glutamate synthase (GltS) FMN-binding domain. GltS
is a complex iron-sulfur flavoprotein that catalyzes the
reductive synthesis of L-glutamate from 2-oxoglutarate and
L-glutamine via intramolecular channelling of ammonia, a
reaction in the plant, yeast...; Region: GltS_FMN;
cd02808"
/db_xref="CDD:73370"
misc_feature complement(316816..>317808)
/locus_tag="RB2501_04680"
/note="Glutamate synthase domain 2 [Amino acid transport
and metabolism]; Region: GltB; COG0069"
/db_xref="CDD:30418"
misc_feature complement(order(316993..316995,317008..317010,
317026..317028,317050..317055,317116..317118,
317122..317124,317239..317247,317347..317349,
317473..317475,317533..317535,317551..317553,
317656..317658,317707..317709,317788..317799))
/locus_tag="RB2501_04680"
/note="active site"
/db_xref="CDD:73370"
misc_feature complement(order(317050..317055,317116..317118,
317122..317124,317242..317247,317347..317349,
317551..317553,317656..317658,317707..317709,
317788..317799))
/locus_tag="RB2501_04680"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73370"
misc_feature complement(order(317239..317244,317473..317475,
317533..317535))
/locus_tag="RB2501_04680"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73370"
misc_feature complement(order(316993..316995,317008..317010,
317026..317028))
/locus_tag="RB2501_04680"
/note="3Fe-4S cluster binding site [ion binding]; other
site"
/db_xref="CDD:73370"
gene complement(318818..319348)
/locus_tag="RB2501_04685"
/db_xref="GeneID:8454633"
CDS complement(318818..319348)
/locus_tag="RB2501_04685"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193946.1"
/db_xref="GI:260060866"
/db_xref="GeneID:8454633"
/translation="MEELTLGIFVVPTIVLTLVILGYLYFAKQVKDEGEYKRFVFAVA
VTAFMLNFIWELTQGPLYEGFEYDLKHISFCALASVADMLMVFILLFAFGLIFKDVYW
MQNWGLKRILFLVLVGFFGAILAEVWHTARGDWSYADAMPRLPIVEVGLSPVLQFTIL
PWLIFLICKKFIKEKV"
gene complement(319492..320010)
/locus_tag="RB2501_04690"
/db_xref="GeneID:8454634"
CDS complement(319492..320010)
/locus_tag="RB2501_04690"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193947.1"
/db_xref="GI:260060867"
/db_xref="GeneID:8454634"
/translation="MKILKNGVSAVVILTLTFSYAQEKIKLNHDHSKMEMKQTPVEFG
NENVAYAYEHYEHVKNDLVGSNPGDAQKGAEMLNEALGKVEGADAALSASQKIAATDI
LKVQRKAFSELSTEMEALLRGKITSGKLYKDFCPMALNGGAYWLSSVEDIRNPYYGAQ
MLSCGKVAEVIE"
misc_feature complement(319504..319983)
/locus_tag="RB2501_04690"
/note="Protein of unknown function (DUF3347); Region:
DUF3347; pfam11827"
/db_xref="CDD:152263"
gene complement(320035..320487)
/locus_tag="RB2501_04695"
/db_xref="GeneID:8454635"
CDS complement(320035..320487)
/locus_tag="RB2501_04695"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193948.1"
/db_xref="GI:260060868"
/db_xref="GeneID:8454635"
/translation="MKAVKVTGWILLVALVGIQFVPTERNKSDVVPKTDFMVVNEVPK
NVESIIKTSCYDCHSNNTDYPWYNKVQPVAWYLEDHVEHGKEELNFNEWDSYSSRRKN
SKLKSIISQIEDDEMPLTSYTLIHRDARLSDTEKKIVLDWVSKLKDSL"
misc_feature complement(320047..320454)
/locus_tag="RB2501_04695"
/note="Haem-binding domain; Region: Haem_bd; pfam14376"
/db_xref="CDD:206544"
gene complement(320488..321117)
/locus_tag="RB2501_04700"
/db_xref="GeneID:8454636"
CDS complement(320488..321117)
/locus_tag="RB2501_04700"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193949.1"
/db_xref="GI:260060869"
/db_xref="GeneID:8454636"
/translation="MKKANVTTGILAMAIIALMATSCKDKNKEQENQEGHNTEHLDDS
GHMDGTMEDHSQMDQDNMNQGGMAMMSSEVVADYLALKNALVSDDKDGAATAGEKLEG
SLKDFDTSKFSVQQRAELADIIEDATEHAEHIAKSDIGHQREHFDILSKDVIDLLAIT
GSERTLYQAYCPMYNNNKGAQWLSATEEIKNPYYGSKMMTCGSVQKQIN"
misc_feature complement(320500..321057)
/locus_tag="RB2501_04700"
/note="Protein of unknown function (DUF3347); Region:
DUF3347; pfam11827"
/db_xref="CDD:152263"
gene complement(321138..321605)
/locus_tag="RB2501_04705"
/db_xref="GeneID:8454637"
CDS complement(321138..321605)
/locus_tag="RB2501_04705"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193950.1"
/db_xref="GI:260060870"
/db_xref="GeneID:8454637"
/translation="MENGKDKREIPNQNYSESMNTRYCVTERYNLTFGEAVKNVKDQL
DRLGLDIVAEFDVKEYLGVIMKDMPKHLILLVCDQDTAADLIANDIQMGILFPCNVTI
KEIEDESVVEVSMEDTSVTWSSSLKKDVEEIAKKTKENLKKVLDNIGQTNFKL"
misc_feature complement(321168..321539)
/locus_tag="RB2501_04705"
/note="Domain of unknown function DUF302; Region: DUF302;
cl01364"
/db_xref="CDD:207386"
gene complement(321616..322002)
/locus_tag="RB2501_04710"
/db_xref="GeneID:8454638"
CDS complement(321616..322002)
/locus_tag="RB2501_04710"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193951.1"
/db_xref="GI:260060871"
/db_xref="GeneID:8454638"
/translation="MNYYFNKTLNEDFDKVIEKVTEELKNEGFGILTEIDVKETLKKK
LDVDFKKYKILGACNPPYAHKALEAEDKIGTMLPCNVIVQEIEECTVEVAAVNPMASM
QAVENEKLTEVADEITSRLEHVIGKL"
misc_feature complement(321619..321996)
/locus_tag="RB2501_04710"
/note="Domain of unknown function DUF302; Region: DUF302;
cl01364"
/db_xref="CDD:207386"
gene complement(322007..322198)
/locus_tag="RB2501_04715"
/db_xref="GeneID:8454639"
CDS complement(322007..322198)
/locus_tag="RB2501_04715"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193952.1"
/db_xref="GI:260060872"
/db_xref="GeneID:8454639"
/translation="MMMWWWILIPIILILAIFLFRGGSPRSSKSKENPMAILDNRFAK
GEMSKEEYEEQKRTINSKN"
misc_feature complement(322022..>322141)
/locus_tag="RB2501_04715"
/note="Short C-terminal domain; Region: SHOCT; cl01373"
/db_xref="CDD:207389"
gene complement(322256..322729)
/locus_tag="RB2501_04720"
/db_xref="GeneID:8454640"
CDS complement(322256..322729)
/locus_tag="RB2501_04720"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193953.1"
/db_xref="GI:260060873"
/db_xref="GeneID:8454640"
/translation="MQVEENRNAIYQEIISNPVQFTNFISEARKNEEAKKILMKTHME
QMESGNMKMMMDKNPEMKEKMQAHMQQMMEKNPEMKKKMHSKMLDKMMESEKGRKMMM
EKMHNNEMMKKEMKERMKKMMEANPDMMEEMMQKMMEKNPGMMQKMKEKMKNKGQ"
gene complement(322874..324166)
/locus_tag="RB2501_04725"
/db_xref="GeneID:8454641"
CDS complement(322874..324166)
/locus_tag="RB2501_04725"
/codon_start=1
/transl_table=11
/product="amino acid transporter"
/protein_id="YP_003193954.1"
/db_xref="GI:260060874"
/db_xref="GeneID:8454641"
/translation="MAQYKKNSLSLTGAVSLGTGVMIGAGIFALLGQVAELSGQWFPI
AFLVGAIISGFSAYSYIKMSNAYPSAGGIANYLKKIYGKSALTASGALLMAFSMVINE
SLVARTFGSYTLQLFDVGDDSIWVPILGVLLLVVAFLINISGNNVIGKSSLVMAILKI
GGISIFAIGGLWAAGYSFGEVLPSGDLGEYPITSYLGALALSILAYKGFTTITNSGDE
IVNPNKNVGRAIIISLGICTLVYLLVAFAVSSNLSIEEIIKAKDYSLAEASKPAFGKY
GLWFTVGIAIVATISGVVASVFAVSRMTAMLTDMELIPHNHFGMSGGIQRHMLVYTVV
LAITLTVLFDLTRIASLGAILYLIMDIGIHWGILKNLKKEIKANTYIIATAIFLDFIV
LGAFLYIKALSDILVVVVAAVLMVLIFTGEKWFLKRKD"
misc_feature complement(322979..324142)
/locus_tag="RB2501_04725"
/note="Amino acid permease; Region: AA_permease_2;
pfam13520"
/db_xref="CDD:205698"
misc_feature complement(<323273..324139)
/locus_tag="RB2501_04725"
/note="Transmembrane amino acid transporter protein;
Region: Aa_trans; cl15776"
/db_xref="CDD:210176"
gene complement(324170..326506)
/locus_tag="RB2501_04730"
/db_xref="GeneID:8454642"
CDS complement(324170..326506)
/locus_tag="RB2501_04730"
/codon_start=1
/transl_table=11
/product="Copper resistance protein CopA"
/protein_id="YP_003193955.1"
/db_xref="GI:260060875"
/db_xref="GeneID:8454642"
/translation="MNTKITTLLISLMSLAINAQFVANDTEENIDNWPERVYDLTIGY
ETVNYTGKDVKAMTINGGIPGPNLEFNEGEFAIINVTNKMDEETSVHWHGLILPNFYD
GVPYLTTPPIKPGETQQYKFALKQSGTYWYHSHTGLQEQRGVYGSIQINPKDTDLEYD
KDLVLVLSDWMDENPKTQLKNLKRGNEWYLIKKNQVQSWDKVIAKGAVGAKLKMMWQR
MPDMAILDNYYDLFFINGRAEQNYPDFKPGEKVRVRFVNAAAATYFWLTFGGEDPMLI
SADGLDVVPVKKNKTLIGVAETYDFIVTVPESGKLEIRVTSQDGSGQASAYMGTGDIF
KAPDVPVPDLIKQMQQLMSMDMKMGAPAAKLNPSKNDSIKKMMKYAMKMDGMQMDGMK
KDKDSTKMKGDGMAHQDMKLKEDKMQMDGGMNMGYMVPQDKVIGDNMKTGGNPEFNYH
YLEAPGTTEFEEGKPVREMLFNLTGNMNRYVWSINGVPLSETDKIKINQGEVVRITLN
NMTMMHHPMHLHGHFFRVLNENGDRSPLKHTVNVAPMQKVVIEFDAVEYGDWFFHCHV
LYHMNSGMARVFSYDTPRDERLMGYPLSNLTTEADHIWTWGEVTTASHLSELFLTATN
IRNQFILRGEYGWNENLEAEFTYERWLNSYFRVFGGVNMENEMEDSMDEISTTGVVGV
RYLLPLLIDSDLRIDNKLRPTISLSTATMIFRNVALYGEYEYQMDFGWVNDFEPGTDF
EKEVTWQVGLEFVLSRDFSLMGSYDNRFGAGGGLSLRF"
misc_feature complement(324776..326395)
/locus_tag="RB2501_04730"
/note="copper-resistance protein, CopA family; Region:
copper_res_A; TIGR01480"
/db_xref="CDD:162383"
misc_feature complement(326045..326386)
/locus_tag="RB2501_04730"
/note="Multicopper oxidase; Region: Cu-oxidase_3;
pfam07732"
/db_xref="CDD:203745"
misc_feature complement(<325595..326026)
/locus_tag="RB2501_04730"
/note="Cytochrome C oxidase subunit II, periplasmic
domain; Region: COX2; cl11412"
/db_xref="CDD:209309"
misc_feature complement(324773..325099)
/locus_tag="RB2501_04730"
/note="Multicopper oxidase; Region: Cu-oxidase_2;
pfam07731"
/db_xref="CDD:203744"
gene complement(326585..327802)
/locus_tag="RB2501_04735"
/db_xref="GeneID:8454643"
CDS complement(326585..327802)
/locus_tag="RB2501_04735"
/codon_start=1
/transl_table=11
/product="outer membrane efflux protein"
/protein_id="YP_003193956.1"
/db_xref="GI:260060876"
/db_xref="GeneID:8454643"
/translation="MKKYVQLFLGIMSIAAINAQELESLIEQAELNNPEIQAYELRYN
IASEKINEVKTFPNTEISAGVFASEPETRTGAQKARFSAKQMIPWFGTITARENYASS
LADAQYEDLVIAKRKLTLAVSQSYYRLFAIRAKQKVLDENIELLETYERLALTSVEVG
KASAVDVLRLQIRQNELEQSKEVLSEEYQAEQTLFNNLLNREENTQVDVYYEFTIPEV
DPVFAEGDLQLHPELVKYDKLYESVEKSELLNQKEALPDLGFGLDYIPVAERPAMDFS
DNGKDIVMPMVSLSIPIFNNKYQSISKQNELRQQEITAQKAERTNKLKTLLSEAINQR
DANRIRFNVQQRNIDKAIEAEKILIKSYETGTIDFNDVLDVQELQLKFQINQIESIKG
YYIQSSNINYLKS"
misc_feature complement(327203..327739)
/locus_tag="RB2501_04735"
/note="Outer membrane efflux protein; Region: OEP;
pfam02321"
/db_xref="CDD:202204"
misc_feature complement(326594..327124)
/locus_tag="RB2501_04735"
/note="Outer membrane efflux protein; Region: OEP;
pfam02321"
/db_xref="CDD:202204"
gene complement(327799..331566)
/locus_tag="RB2501_04740"
/db_xref="GeneID:8454644"
CDS complement(327799..331566)
/locus_tag="RB2501_04740"
/codon_start=1
/transl_table=11
/product="copper/silver resistance-related transport
membrane protein"
/protein_id="YP_003193957.1"
/db_xref="GI:260060877"
/db_xref="GeneID:8454644"
/translation="MLNKSIKFLIENKLVAVLLLALFVGWGIVNAPFEWNTGALPRNP
VAVDAIPDIGENQQIVFTKWDGRSPQDIEDQITYPLTTSLLGIPGVKTIRSSSMFGFS
SIYIIFEEDIEFYWSRSRILEKLNSLPAGLLPEGVNPALGPDATGLGQIFWYTLEGRD
KDGNVTGGWDLQELRSIQDFYVKYALSSASGVSEVASIGGYVLEYQVDVNPELMKQYG
ISLQQVVKAVKQSNRDIGAQTLEINQAEYLIRGLGYVKSLSDLENAVVTSSDFTSIRI
GDIARVAHGPATRRGILDKEGAEVVGGVVVARYGANPMEVINNVKDQIDELSAGLPSK
ELSDGTTSQLTIVPFYDRTELIQETLGTLDEALTLEILITILVIIVMVFNLRASILIS
GLLPVAVLMVFIAMKLFGVDANIVALSGIAIAIGTMVDVGVILSENIIRHLDESDGKE
SINKVVYTATAEVSGAILTAVMTTIISFIPVFTMIGAEGKLFRPLAFTKTFALTASII
VALFLIPPFAAFLFRKKSVKNTLGYGVNGVLIVLGILAIVYGSLLGLILIAFGVVGLL
KYPELASKISSGFTISDNRANLINIIISAFAIVFVLAEYWRPLGLDKSIFWNLIFVGL
ICFGLLGFFTIFRNYYTRILRWALRNKLIFLSVPTAIVVFGVMIMRNTGKEFMPSLNE
GSFLLMPTSLPHAGVEENKRVLQQLDMAVASIPEIATVVGKSGRTESALDPAPLSMYE
NVIQYKPEYMLDEDRKWQRYKVNEDGMFELRDGTFVTNPNLEVDTDDADYKESSIKSA
FSIQQKDLIPDEDGEYFRNWRPEIKSPDDIWKEIVKVTKFPGVTSAPKLQPIETRLVM
LQTGMRAPMGIKVKGQDLKQIEAFGIQLEDILKEAEGVKDEAVFADRIVGKPYLLIDI
DRERLARYGITIEDVQSVLQVAVGGMVLTQTVEGRERYGVRVRYPRELRENPQDLKEI
YVPVEKGNPVPLSELVTINYEKGPQVIKSEDTFLVGYVLFDKLDGFAEVEVVENAQAL
IQEKIDSGELIVPKGINYLFTGTYENQLRAEKTLSVVVPLALTIIFLILYFQFRSVGT
SLMVFTGIAVAFAGGFLMIWFYGQDWFLNFNFFGENLRDLFQMHTINLSVAVWVGFIA
LFGIATDDGVVMATYLTQTFDRNKPDTLMGVRDSVVEAGEKRIRPCLMTTATTILALL
PVLTSTGRGSDIMIPMAIPSFGGMLIALITLFVVPVLYSWKAEFQLKRLSK"
misc_feature complement(<330040..331566)
/locus_tag="RB2501_04740"
/note="Putative silver efflux pump [Inorganic ion
transport and metabolism]; Region: COG3696"
/db_xref="CDD:33492"
misc_feature complement(<329323..>329649)
/locus_tag="RB2501_04740"
/note="Putative silver efflux pump [Inorganic ion
transport and metabolism]; Region: COG3696"
/db_xref="CDD:33492"
misc_feature complement(327805..>329151)
/locus_tag="RB2501_04740"
/note="Putative silver efflux pump [Inorganic ion
transport and metabolism]; Region: COG3696"
/db_xref="CDD:33492"
gene complement(331676..332056)
/locus_tag="RB2501_04745"
/db_xref="GeneID:8454645"
CDS complement(331676..332056)
/locus_tag="RB2501_04745"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193958.1"
/db_xref="GI:260060878"
/db_xref="GeneID:8454645"
/translation="MALLVLLSTFSFAVDRHYCGDVLVDFSFFGKAESCGMEMQQSKD
SHYHLIGNKGCCEDQTLAIAGQDDLKISYENLNDEQQVFVVSFLYSFINLYEGFDTKI
VPFKDYSPPPLIRDIQVLDQTFLI"
gene 333401..333955
/locus_tag="RB2501_04750"
/db_xref="GeneID:8454646"
CDS 333401..333955
/locus_tag="RB2501_04750"
/codon_start=1
/transl_table=11
/product="regulatory protein"
/protein_id="YP_003193959.1"
/db_xref="GI:260060879"
/db_xref="GeneID:8454646"
/translation="MNMVCSRCLKVIKQELRDLGIPVLSLELGKLTVKAQEISIAEVD
REVMDVLHSNGFEIAKSEEEMIVEQIKIALISLVSDVPFDIKENISDYLTKSLHRAYK
VLSKKFSKNENTTIEKYFIKLKIEKVKELIQLRQHTFSDIAYMLDYSSVNHLSRQFKE
IMGMSMTDYKNSQVWQRGFLDEII"
misc_feature 333659..333910
/locus_tag="RB2501_04750"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature <333812..333907
/locus_tag="RB2501_04750"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 334032..334439
/locus_tag="RB2501_04755"
/db_xref="GeneID:8454647"
CDS 334032..334439
/locus_tag="RB2501_04755"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193960.1"
/db_xref="GI:260060880"
/db_xref="GeneID:8454647"
/translation="MKITKTLSGPITLTVLLLLLAIPSVNSQEKWEAPESADKLTNPL
KNDASAVANGKRTYKMLCVICHGAKGKGDGMGGAGLTPKPTDLTNTDVQAQTDGALFW
KLTEGRSPMASYKSALPEKKRWELINYIRTLKK"
misc_feature 334179..334421
/locus_tag="RB2501_04755"
/note="Cytochrome C oxidase, cbb3-type, subunit III;
Region: Cytochrome_CBB3; pfam13442"
/db_xref="CDD:205620"
gene 334436..335596
/locus_tag="RB2501_04760"
/db_xref="GeneID:8454648"
CDS 334436..335596
/locus_tag="RB2501_04760"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193961.1"
/db_xref="GI:260060881"
/db_xref="GeneID:8454648"
/translation="MKKLLVFMTILAFGSSAFGQTYNTFEPSKTQFMLRGYGHTGFEY
MDSGDESESTFLGSAFAPIFLYKHSDRLMFEAELEFVLEGNELETGLEYADVMYVLNK
NMTVRAGKFLLPFGTFIERLHPAWINRLPNAPLGYGHDGIAPSSGIGVELRGAFDLGG
PKLNYSVYSTNGPRIKDGSEEPEEAGILEFANYEDTNLAKAFGGRIGLLPFSDSSTEI
GFSAYSTSGTGEEGSEFEDIGAFLYALDFSLVKQIPGLSGIVDVKAQYNSSNVDTATF
IEMHEDGDLEEYSFDNQSNSFYAQLSYRPTMASSDFVKKLELVGRYSDFNAPEGAEWE
EKSTQYAFGLNYWLSWRSVVKLSYQTTETEGGHDGDGITNTNGLFLHWAIGF"
gene 335619..335939
/locus_tag="RB2501_04765"
/db_xref="GeneID:8454649"
CDS 335619..335939
/locus_tag="RB2501_04765"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193962.1"
/db_xref="GI:260060882"
/db_xref="GeneID:8454649"
/translation="MKTVYKLSIALGLMVAFGLTVVACSSTKDKNTDVPADSVVEASE
EFSIEKSGAQLWGETCNRCHIAPSPADYNDTDWETISLHMRVRANLTEHESKKIEEFL
KSAN"
misc_feature <335781..335927
/locus_tag="RB2501_04765"
/note="trimethylamine N-oxide reductase cytochrome c-type
subunit; Provisional; Region: PRK15032"
/db_xref="CDD:184992"
gene 336075..336533
/locus_tag="RB2501_04770"
/db_xref="GeneID:8454650"
CDS 336075..336533
/locus_tag="RB2501_04770"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193963.1"
/db_xref="GI:260060883"
/db_xref="GeneID:8454650"
/translation="MLSMIAFIALGSCNQSVDANALLENTETRTEIMNTIVGNHSYMT
EFMDAMQNNDHAMQMMQGNTKMMGNMMQADGMQMMMKDSVMMKNMMQNMMKDGKMMGD
MMQMMHEKGIMSKDCMESCMKMMGDKGMDTKGMMGNMPSGSSNADHSENH"
gene 336577..336801
/locus_tag="RB2501_04775"
/db_xref="GeneID:8454651"
CDS 336577..336801
/locus_tag="RB2501_04775"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193964.1"
/db_xref="GI:260060884"
/db_xref="GeneID:8454651"
/translation="MDGHRMWPTPIAYFFAPVFGIKGNLTLFTFIVIMFAVHLLMPMR
HGGHSHGLTEDNLKRKSEEKQDKDKEQHHH"
gene 336815..337030
/locus_tag="RB2501_04780"
/db_xref="GeneID:8454652"
CDS 336815..337030
/locus_tag="RB2501_04780"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193965.1"
/db_xref="GI:260060885"
/db_xref="GeneID:8454652"
/translation="MKKRFQIDGISCGGCITRIKKVLEGHEAIDEAKIFLNPKGVAKI
NMNENLSINDLQKQLDQLDGYTITEIE"
misc_feature 336827..337018
/locus_tag="RB2501_04780"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:29471"
misc_feature order(336842..336850,336857..336859)
/locus_tag="RB2501_04780"
/note="metal-binding site [ion binding]"
/db_xref="CDD:29471"
gene 337091..337279
/locus_tag="RB2501_04785"
/db_xref="GeneID:8454653"
CDS 337091..337279
/locus_tag="RB2501_04785"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193966.1"
/db_xref="GI:260060886"
/db_xref="GeneID:8454653"
/translation="MHFIWWIIWLILLIWIFFVPYDIPYRKNENENPNDILKKRFAKG
EISKEEYEESKKVLESDK"
gene 337295..337576
/locus_tag="RB2501_04790"
/db_xref="GeneID:8454654"
CDS 337295..337576
/locus_tag="RB2501_04790"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193967.1"
/db_xref="GI:260060887"
/db_xref="GeneID:8454654"
/translation="MNRINIKKLGFAMGLTGALVYLGCIVVMLTAGREGTIDFFNSLL
HGLDTTSIIRMDVPLWEAAIGIVQTFIIGWLIGALIAAFYNVQLKNRRV"
gene 337573..338586
/locus_tag="RB2501_04795"
/note="glyceraldehyde 3-phosphate dehydrogenase
pseudogene"
/pseudo
/db_xref="GeneID:8454655"
gene 338595..339653
/locus_tag="RB2501_04805"
/db_xref="GeneID:8454656"
CDS 338595..339653
/locus_tag="RB2501_04805"
/note="catalyzes the formation of glycerone phosphate and
D-glyceraldehyde 3-phosphate from D-fructose
1,6-bisphosphate"
/codon_start=1
/transl_table=11
/product="fructose-bisphosphate aldolase"
/protein_id="YP_003193968.1"
/db_xref="GI:260060888"
/db_xref="GeneID:8454656"
/translation="MTFEEIKEHLGDTASFYLEHVSNKITKDELQLPEKHVVDKVFVN
TDRNTRVLGSLSQLYGHGNLAGTGYLSILPVDQGIEHSAAFSFYKNPDYFDPENIIKL
AIEAGCNGVASTFGGLALYARKYAHKVPFIVKINHNELLTYPTKYDQTLFGTVKEAWN
MGAVAVGATIYFGSDESNRQLKEISEAFAEVHSLGMATILWCYTRNEAFETDTEDYHS
SADLSGQANHLEVTIQADIIKQKLPTTNFGFKNIGFGKYEDAMYETLTTEHPIDLCRL
QVANCYMGKIGLINSGDGSKGESDLTEAIITAVVNKRAGGSGLILGRKAFQRPFKEGV
ELLRGVQGVYLEKKVTIA"
misc_feature 338601..339650
/locus_tag="RB2501_04805"
/note="fructose-bisphosphate aldolase; Provisional;
Region: PRK09250"
/db_xref="CDD:181728"
misc_feature 338802..339629
/locus_tag="RB2501_04805"
/note="Class I fructose-1,6-bisphosphate (FBP) aldolases
of the archaeal type (DhnA homologs); Region: DhnA;
cd00958"
/db_xref="CDD:188645"
misc_feature order(339357..339359,339450..339452,339522..339530,
339594..339602)
/locus_tag="RB2501_04805"
/note="putative active site; other site"
/db_xref="CDD:188645"
misc_feature 339357..339359
/locus_tag="RB2501_04805"
/note="catalytic residue [active]"
/db_xref="CDD:188645"
gene 339667..341031
/locus_tag="RB2501_04810"
/db_xref="GeneID:8454657"
CDS 339667..341031
/locus_tag="RB2501_04810"
/codon_start=1
/transl_table=11
/product="proton/sodium-glutamate symporter"
/protein_id="YP_003193969.1"
/db_xref="GI:260060889"
/db_xref="GeneID:8454657"
/translation="MFDTEIKSLKSLNHYLQKLVEDRLWLKVIIALFLGVGLGLLLSP
QNGWITKSTADVLGNWLALPGMLFLKLVQMIMIPLIVASIITGIASNDKENLKKLGGG
VLLYFISTTIISVTIGTILALIFRPGKYLHQQAVADHEEALTSNAESTELSFGLNDIP
TAITNLLPDNPLASMVSGEMLSIVIFTIIIGVAVLSLPDDLLKPVKLLLSAIQEICMT
VVKWAMLLVPVAVFGLMAQLTSSVGLNSLSGLGFYVLVVLIGLLLLVIIYLIGVSLLG
KGNPLRFLRKIRDVQLLAFSTTSSAAVMPLSLKTAEEELKVDPTISNFIIPIGATVNM
DGTALYQTITTLFIAQAYGLEMGLLNVIVVVVTIVAASIGTPAIPGGGVVILASVLSG
AGIPAEGIIIIIGVERLLGMFRTAVNVTGDLTACMVFNRFYGNMPITGSDKVLKTQEE
CSTV"
misc_feature 339736..340962
/locus_tag="RB2501_04810"
/note="Sodium:dicarboxylate symporter family; Region: SDF;
pfam00375"
/db_xref="CDD:201189"
misc_feature 339832..340968
/locus_tag="RB2501_04810"
/note="Na+/H+-dicarboxylate symporters [Energy production
and conversion]; Region: GltP; COG1301"
/db_xref="CDD:31492"
gene 341147..341479
/locus_tag="RB2501_04815"
/db_xref="GeneID:8454658"
CDS 341147..341479
/locus_tag="RB2501_04815"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_003193970.1"
/db_xref="GI:260060890"
/db_xref="GeneID:8454658"
/translation="MNAAIYPTIFTSFFTRYENLKQLACFCGAAPFEYTYGTSPQKWA
KTHHMENRVLKRQFHMCALSAINHDPELREYYQRKAAEGKNKMLEINNVRNKLILRNC
TVMKRQKP"
misc_feature <341186..341377
/locus_tag="RB2501_04815"
/note="Transposase IS116/IS110/IS902 family; Region:
Transposase_20; pfam02371"
/db_xref="CDD:202223"
gene 341755..342516
/locus_tag="RB2501_04820"
/db_xref="GeneID:8454659"
CDS 341755..342516
/locus_tag="RB2501_04820"
/codon_start=1
/transl_table=11
/product="stress response protein/ ferredoxin I 3"
/protein_id="YP_003193971.1"
/db_xref="GI:260060891"
/db_xref="GeneID:8454659"
/translation="MAKLFDAEIHFFHLIQTPVDWVKLEKEKEKRHPETLKKIGSAKS
ALRELEKKAEQEHLKCQTFLQYQVGTKHIIKHSGHFDHDFIITGSSGTKGAVRELLGS
YVEEIVRKSDVPVIVVKEDEVAFPFKNIVFVSDFEEDVSQAFKHVISIAKKCNAHIHL
LRVNTKTDTNSIQAGLKPIQTFVEKFPGLKHYSMFVNNEPSVEVGINTFLTYEPADLI
AMCTHGNTGFLNLFSKSIAEGVANHSTLPVMTIRI"
misc_feature 341755..342108
/locus_tag="RB2501_04820"
/note="Usp: Universal stress protein family. The universal
stress protein Usp is a small cytoplasmic bacterial
protein whose expression is enhanced when the cell is
exposed to stress agents. Usp enhances the rate of cell
survival during prolonged exposure to...; Region:
USP_Like; cd00293"
/db_xref="CDD:30165"
misc_feature order(341794..341796,342013..342018,342022..342027,
342055..342066)
/locus_tag="RB2501_04820"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30165"
misc_feature 342139..342507
/locus_tag="RB2501_04820"
/note="Usp: Universal stress protein family. The universal
stress protein Usp is a small cytoplasmic bacterial
protein whose expression is enhanced when the cell is
exposed to stress agents. Usp enhances the rate of cell
survival during prolonged exposure to...; Region:
USP_Like; cd00293"
/db_xref="CDD:30165"
misc_feature order(342151..342159,342241..342243,342412..342417,
342421..342426,342454..342465)
/locus_tag="RB2501_04820"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30165"
gene 342519..343370
/locus_tag="RB2501_04825"
/db_xref="GeneID:8454660"
CDS 342519..343370
/locus_tag="RB2501_04825"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193972.1"
/db_xref="GI:260060892"
/db_xref="GeneID:8454660"
/translation="MGVIQVKKYSGEMEAFDMNKLVNSLRRSQVDESLVQQIAHEVEG
NIEDGMTTKKIYQMAFRMLKSRARVSASRYKLKKALMELGPSGYPFEKFVGKVLQYEG
FEVEVGVLVKGDCVQHEVDVIAQKGNRHYMIECKYHSDQGRFCNVKIPLYIQSRFLDV
QKQWEKQEGHKNKSHQGGVYTNTRFTSDATHYGNCVGLMLTSWDYPKGKALKNRIDTA
GLHPLTSLTTITKSEKSKLLEHGIVLCREIKDNPDVLKKVGIDGARRKKILADSQSLC
ETHQPNT"
misc_feature 342528..>342683
/locus_tag="RB2501_04825"
/note="ATP cone domain; Region: ATP-cone; pfam03477"
/db_xref="CDD:202657"
misc_feature 342774..>342986
/locus_tag="RB2501_04825"
/note="Superfamily of nucleases including Short Patch
Repair (Vsr) Endonucleases, archaeal Holliday junction
resolvases, MutH methy-directed DNA mismatch-repair
endonucleases, and catalytic domains of many restriction
endonucleases, such as EcoRI, BamHI, and...; Region:
Restriction_endonuclease_like; cl00277"
/db_xref="CDD:212600"
misc_feature order(342789..342791,342879..342881,342918..342920,
342924..342926)
/locus_tag="RB2501_04825"
/note="putative active site [active]"
/db_xref="CDD:29959"
gene 343374..344750
/locus_tag="RB2501_04830"
/db_xref="GeneID:8454661"
CDS 343374..344750
/locus_tag="RB2501_04830"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193973.1"
/db_xref="GI:260060893"
/db_xref="GeneID:8454661"
/translation="MTERTINIHFLGAAGTVTGSKYLLDTGDRKILIDCGLFQGLKEL
RLKNWEYPPVNVTEIDAVLLTHGHLDHTGYLPRLVKQGFKGPIYGTYPTLDIAKIILN
DSAKIQEQEAERANKGGYSKHSPAEPLYDLKDVEKTIPYFKGIPLNQWLPILKNVKAR
FQYNGHILGATYIELDVQDKRFVFSGDIGRTNDLLLYPPAKPKRADVLFMESTYGGRF
HPEETEALPEIEKLVNETVSRGGSLFIPSFSVERAQLMMLIFWRLLKETKIPKVPMIM
DSPMGANVLELFHRTRDWHRLEDDECDKMCSHFTVVSSYRETMELRSDDKPKIVIAGS
GMLTGGRMLNYLETQAQNPDNTLLFVGYQAEGTRGRKLLEGEKEIKVYGKTVSFKMQV
AEIEGLSAHADHAELLDWLSDIKIQPEKIFIVHGEREGAEALKQGIKEIYDWDSEVPQ
LYGIEELK"
misc_feature 343389..344738
/locus_tag="RB2501_04830"
/note="Predicted exonuclease of the beta-lactamase fold
involved in RNA processing [Translation, ribosomal
structure and biogenesis]; Region: YSH1; COG1236"
/db_xref="CDD:31429"
misc_feature 343437..343940
/locus_tag="RB2501_04830"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; pfam00753"
/db_xref="CDD:201425"
misc_feature 344130..344489
/locus_tag="RB2501_04830"
/note="Beta-Casp domain; Region: Beta-Casp; smart01027"
/db_xref="CDD:198095"
misc_feature 344523..344660
/locus_tag="RB2501_04830"
/note="RNA-metabolising metallo-beta-lactamase; Region:
RMMBL; pfam07521"
/db_xref="CDD:203663"
gene 344780..346282
/locus_tag="RB2501_04835"
/db_xref="GeneID:8454662"
CDS 344780..346282
/locus_tag="RB2501_04835"
/note="catalyzes the formation of thymine and
2-deoxy-alpha-D-ribose 1-phosphate from thymidine"
/codon_start=1
/transl_table=11
/product="thymidine phosphorylase"
/protein_id="YP_003193974.1"
/db_xref="GI:260060894"
/db_xref="GeneID:8454662"
/translation="MEEKSNILKYKSLGIYTQNENVVYMREDCHVCISEGFEALTRIR
VSNMSSSIIASLHIITSEVLRQGEIGLSQIAAKKLKVWDGETLYVSHLEPIESLSFVR
AKIYNQKLGYTAYKDIITDIIEGDYSNIHLSAFITACAGDRMDIDEISDLTKAMISSG
KQLDWKKEIVVDKHCIGGLPGNRTTPIVVAIAAAYGLTMPKTSSRAITSPAGTADTME
VLTNVTLSGEEIKRVVEQEGGCLVWGGTAQLSPADDILIKVEKALDIDSEGQLIASVL
SKKAAAGATHVVIDIPVGKTAKVRSEEAVQKLKEHMEAVGNAVGLKIKVVITDGSQPV
GRGIGPNLEAVDVLSVLQNKRDAPQDLKERGLLLAGHLLELSEKVETGKGLDTAKELL
ESGKAYQKFEAICKAQGRFSKTYVAPYQFEMHAPKRGKVKKINNRKIAKLAKLSGAPQ
SKLAGISMNVRLGDEIEKGGLLYILHAETNGELNYALEYYENHDDIITIQ"
misc_feature 344828..346276
/locus_tag="RB2501_04835"
/note="thymidine phosphorylase; Provisional; Region:
PRK04350"
/db_xref="CDD:179835"
misc_feature 345068..345262
/locus_tag="RB2501_04835"
/note="Glycosyl transferase family, helical bundle domain;
Region: Glycos_trans_3N; pfam02885"
/db_xref="CDD:145834"
misc_feature 345284..345973
/locus_tag="RB2501_04835"
/note="Glycosyl transferase family, a/b domain; Region:
Glycos_transf_3; pfam00591"
/db_xref="CDD:144256"
misc_feature 346070..346267
/locus_tag="RB2501_04835"
/note="Pyrimidine nucleoside phosphorylase C-terminal
domain; Region: PYNP_C; smart00941"
/db_xref="CDD:198009"
gene 346292..347185
/locus_tag="RB2501_04840"
/db_xref="GeneID:8454663"
CDS 346292..347185
/locus_tag="RB2501_04840"
/codon_start=1
/transl_table=11
/product="phosphoribosylpyrophosphate synthetase"
/protein_id="YP_003193975.1"
/db_xref="GI:260060895"
/db_xref="GeneID:8454663"
/translation="MQTILFSLPGNQELTELLAKKMNAEIGECAIRKFPDGESYTRIL
SDVKGKCVVLVCTLHEPDVKLLPLYFLSHTAKSLGAMCTCLVAPYLAYMRQDKVFNDG
EGVSSTYFGKLISGFADSITTVDPHLHRISSLGEVYDIPNRVIHAADAISKYINENIH
NPVLIGPDSESEQWVSDVAKKAEVPFTVLQKVRHGDRDVEVSVPNVAKYKVSTPVLVD
DIISTAQTMIETTEHLKNAGMKPAICIGIHAVFSGNAYQDLWDAHVKDIITCNTIPHQ
SNGIDLSDVIAQEVTELMYHT"
misc_feature 346292..347182
/locus_tag="RB2501_04840"
/note="phosphoribosylpyrophosphate synthetase;
Provisional; Region: PRK07199"
/db_xref="CDD:180877"
misc_feature 346301..346663
/locus_tag="RB2501_04840"
/note="N-terminal domain of ribose phosphate
pyrophosphokinase; Region: Pribosyltran_N; pfam13793"
/db_xref="CDD:205966"
misc_feature 346730..347107
/locus_tag="RB2501_04840"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(346793..346795,346799..346801,346943..346951,
346955..346969,347039..347041)
/locus_tag="RB2501_04840"
/note="active site"
/db_xref="CDD:206754"
gene 347248..347832
/locus_tag="RB2501_04845"
/db_xref="GeneID:8454664"
CDS 347248..347832
/locus_tag="RB2501_04845"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193976.1"
/db_xref="GI:260060896"
/db_xref="GeneID:8454664"
/translation="MLIGQLADRLVVRENYDENGVFRNKQTFQAGGLIETDGYYEIEV
ETEFFDENGNSTDKYSTTYRCRPEASSVMVMAFPFSNRKSKETEINTSSKNFKDLYNM
DSLKNVELEISFDSGLLDFFGSKSKIYIFDRKLNPKTKDIQINSKLTVKAYSWGIRIK
ELEYSVLEKLSKKGLLSYQKFVENDGSYFTIIYK"
gene 347844..348137
/locus_tag="RB2501_04850"
/db_xref="GeneID:8454665"
CDS 347844..348137
/locus_tag="RB2501_04850"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193977.1"
/db_xref="GI:260060897"
/db_xref="GeneID:8454665"
/translation="MKSYDTLSEAINALQNRGYTYNFNLNPHCLECAALKLEIHPENF
KVDEMHRFEGMSSTDDNSILYAISSKDGIKGTLVDAYGVYAQNISEEMRKKLR"
gene 348154..350310
/locus_tag="RB2501_04855"
/db_xref="GeneID:8454666"
CDS 348154..350310
/locus_tag="RB2501_04855"
/codon_start=1
/transl_table=11
/product="copper-transporting ATPase, P-type (copB)"
/protein_id="YP_003193978.1"
/db_xref="GI:260060898"
/db_xref="GeneID:8454666"
/translation="MENHEHHKHDHSKRSKGSAKEKAVDKKTELKDSLAEKTEHGHTK
TMDKEHNMSHDEHSDHNPKHGQMGHDHHKMMIADFRKRFWVTLVLTIPILFLSPMIQE
FFGYDFLLPGNPYILFAISSIVYFYGGWPFLKGFWSEVKKGAPGMMTLIAMAISVAYF
YSSATVFGLEGVDFFWELATLIAIMLVGHWIEMKSVLGASKALQLLVSMMPAEAHRVN
GETIEDIALEDLLKGDLILIKPGEKVPADGIVVEGSSYLNESMLTGESKPVKKELNDK
VIGGSVNGNSSLKVKVEHTGKDSYLNKVITMVEEAQKTKSKMQNLSDRAAKWLTYIAL
AIGFGTLAVWLALGFPFVYALERMVTVMVIACPHALGLAIPLVVAISTAVSAQNGLLI
RNRTAFEESRKISALLFDKTGTLTKGDFGVTRIESVDNNNSSAEVLRLASALEQSSEH
PIAVGIIKKIKEDKVIIPKPKNFNSITGKGVEATVENKKIKVVSPGYLRDEKIDIPKD
AYSDAAETVVFVLIDGKLAGYIALADEIRPESAEAIRIFKKNNIKVLMATGDNEKTAK
AVSEKLGLDGYYAEVLPHQKVEIVKQLQEKEEFVAMTGDGVNDAPALAQANVGIAVGS
GTDVAAETADIILVNSNPQDIANLILFGKATYNKMIQNLIWATGYNVVAIPLAAGVLY
ASGFVLGPAVGAVFMSLSTIIVAINAQLLKRKIAKK"
misc_feature 348181..348297
/locus_tag="RB2501_04855"
/note="Late embryogenesis abundant protein; Region: LEA_4;
pfam02987"
/db_xref="CDD:111833"
misc_feature 348535..350232
/locus_tag="RB2501_04855"
/note="copper-(or silver)-translocating P-type ATPase;
Region: ATPase-IB1_Cu; TIGR01511"
/db_xref="CDD:188148"
misc_feature 348694..349353
/locus_tag="RB2501_04855"
/note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
/db_xref="CDD:201018"
misc_feature 349711..350019
/locus_tag="RB2501_04855"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature 349825..349827
/locus_tag="RB2501_04855"
/note="motif II; other site"
/db_xref="CDD:119389"
gene 350311..351525
/locus_tag="RB2501_04860"
/db_xref="GeneID:8454667"
CDS 350311..351525
/locus_tag="RB2501_04860"
/codon_start=1
/transl_table=11
/product="multidrug-efflux transporter"
/protein_id="YP_003193979.1"
/db_xref="GI:260060899"
/db_xref="GeneID:8454667"
/translation="MNKPQKLGRIFLILLSLFVVMLGYGILLPILPYYTERLALKDNL
DADRINFHIGMLTSIYPLFQLIFVIVWGRLSDKYGRKPIILVGLIGFITMNLLTGLAT
SLTMLYSARIFGGIFTSSVIPVSNAYLSDITSQKRRTKTMAWSGVAISSGVIFGPVLG
GLLSQTNVHLELSFGIFHFNRFSIPFLFAAILGLIILFVIIKWLKNTAIVTRIREKTI
KFDFTLSNYFIILLLLSFVMQFVVTLFETVFSIYGKDELAFNSSQVGIGFMLCGSVMA
VLQPVFATYGEKIITSKQQITLGLLITGVSLLMFPFLQSELSVYGMIILFASGGAMVT
PNLLSAVSLLSKEDTGRNISIQSSSNSIGQILGPVLGTWLLAGGFYYPFIIAGLIILM
AIGLVYYLQTKN"
misc_feature 350338..351354
/locus_tag="RB2501_04860"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 350347..351354
/locus_tag="RB2501_04860"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature order(350380..350382,350389..350397,350401..350406,
350479..350481,350488..350493,350500..350502,
350512..350517,350521..350526,350662..350667,
350674..350679,350686..350691,350698..350700,
350734..350739,350746..350751,350767..350769,
351013..351015,351022..351027,351034..351039,
351058..351060,351100..351102,351112..351114,
351124..351126,351133..351135,351145..351147,
351289..351291,351298..351303,351310..351312,
351322..351327,351334..351336)
/locus_tag="RB2501_04860"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(351812..352633)
/locus_tag="RB2501_04865"
/db_xref="GeneID:8454668"
CDS complement(351812..352633)
/locus_tag="RB2501_04865"
/codon_start=1
/transl_table=11
/product="NHL repeat protein"
/protein_id="YP_003193980.1"
/db_xref="GI:260060900"
/db_xref="GeneID:8454668"
/translation="MNFRKVYIFPVVFLLLFISSCKKVQKQWHFERKIMLPIESRPLA
LAKDGETIWFSDPDYFRLFRIDLNGRVLDSIIGIQRPMNIHSDKKSLYIPEFLTDTIW
KYRNGRLNPLQIKKRPQAPAGVSVYGDTVAIADFYNHRIIIQTADTSVTIGKQGHQDG
KLYYPIDVKLRGSKVYVADAYNHRVQVFGFGGKHLKTIGLNDQINVASGIELNSQEIA
VTDQENDRVLIYGYDGQLFQVLEEGINYPTDVLLDMEYLYITNFKENSISVYQKR"
misc_feature complement(352070..352150)
/locus_tag="RB2501_04865"
/note="NHL repeat; Region: NHL; pfam01436"
/db_xref="CDD:110440"
gene complement(352971..353456)
/locus_tag="RB2501_04870"
/db_xref="GeneID:8454669"
CDS complement(352971..353456)
/locus_tag="RB2501_04870"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193981.1"
/db_xref="GI:260060901"
/db_xref="GeneID:8454669"
/translation="MKKIALILIITLLGTLSSEAQIQKVDQEVYGMDCAPCAYGLERG
LKKMDGLQNVRVSLNDGKAYLELATENKLTLQGIQEEVKQNGFSAKKAQITISGTVKK
VNGLWVIDTGQELFDISQHSPTELLQALTPGMTTLSGTVEDEEDGNLSGRWAITLTKI
K"
misc_feature complement(353187..353375)
/locus_tag="RB2501_04870"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:29471"
misc_feature complement(order(353346..353348,353355..353363))
/locus_tag="RB2501_04870"
/note="metal-binding site [ion binding]"
/db_xref="CDD:29471"
gene complement(353484..354341)
/locus_tag="RB2501_04875"
/db_xref="GeneID:8454670"
CDS complement(353484..354341)
/locus_tag="RB2501_04875"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193982.1"
/db_xref="GI:260060902"
/db_xref="GeneID:8454670"
/translation="MSFSTFHLRFVLIIILCSSTITIVNAQGHGPLYGLQTPTLAKGG
VDLNVASMSLSTENETSYMLRYLFSYGITEDLQINLTTPTMIERLDNAPRTRGNSNMP
ANGDIEASLWYRFFSNAYGVGKRFESTAILGVSAPTDDVRGQVNVGNSIHGAISTGYA
SRTWYVWLGGGYQYYFEKDNEQLGDLPYASVVVGYRPNIFMGDYPKPDWRIFIETVAE
FPGDNKYNEQQNFRDSRSKKVLMGPSFLGLYGAWGISFGALFPVVQDLTPSSIKENYR
VSINLSYWL"
gene complement(354439..354708)
/locus_tag="RB2501_04880"
/db_xref="GeneID:8454671"
CDS complement(354439..354708)
/locus_tag="RB2501_04880"
/codon_start=1
/transl_table=11
/product="thioredoxin"
/protein_id="YP_003193983.1"
/db_xref="GI:260060903"
/db_xref="GeneID:8454671"
/translation="MKSQVEVFTANCPVCDPVVKMIEELTCDGCEVTTYDLVKKCDDK
TCLTKMNEYGVQKIPAIAVNGKLLDCCKDSAITKEKLIEAGIGQN"
misc_feature complement(<354508..354696)
/locus_tag="RB2501_04880"
/note="Protein Disulfide Oxidoreductases and Other
Proteins with a Thioredoxin fold; Region:
Thioredoxin_like; cl00388"
/db_xref="CDD:213097"
gene complement(354861..355223)
/locus_tag="RB2501_04885"
/db_xref="GeneID:8454672"
CDS complement(354861..355223)
/locus_tag="RB2501_04885"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193984.1"
/db_xref="GI:260060904"
/db_xref="GeneID:8454672"
/translation="MIPRDLSKDIKTRLQSINGQLSGLMKMLDEDTDPEKILIQFKAA
QKGLDKAHFLLLDETYRKALAIKISETLEACPGDCGNEDRIEFIRKQFPDLELESLTD
KMKEIAALKSKLEDSNKE"
misc_feature complement(354948..355202)
/locus_tag="RB2501_04885"
/note="Metal-sensitive transcriptional repressor; Region:
Trns_repr_metal; pfam02583"
/db_xref="CDD:145625"
misc_feature complement(order(355053..355061,355065..355070,
355077..355082,355089..355094,355098..355103,
355107..355115,355119..355127,355131..355142,
355149..355154,355158..355163,355170..355172,
355179..355184,355191..355196))
/locus_tag="RB2501_04885"
/note="putative homotetramer interface [polypeptide
binding]; other site"
/db_xref="CDD:197385"
misc_feature complement(order(355059..355061,355068..355070,
355077..355082,355089..355094,355098..355103,
355107..355115,355119..355127,355131..355142,
355149..355154,355158..355163,355170..355172,
355179..355184,355191..355196))
/locus_tag="RB2501_04885"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:197385"
gene complement(355509..356855)
/locus_tag="RB2501_04890"
/db_xref="GeneID:8454673"
CDS complement(355509..356855)
/locus_tag="RB2501_04890"
/codon_start=1
/transl_table=11
/product="regulatory protein"
/protein_id="YP_003193985.1"
/db_xref="GI:260060905"
/db_xref="GeneID:8454673"
/translation="MKKYDVFIIGSGMSGMTIAYKCASKGLSVGITDELPYGGTCALR
GCDPKKVIIGATEVRDFAKRLQGKGIDTIPDINWKDIMAFKQTFVDEMPRKIEKGYKK
NGIDTFHSSAAFINENTLSVGNQTIQADNVVIASGSKPKVLDFEGGQLAQTSTDFLNL
KELPESLLFIGGGYIAFEFAHIAARSGAEVTIVHRGKRPLENFDKDIVKHLVDATINL
GVRLVLETEVSKIESEDGHFVTTGISEGMETTYKSKAVFNSAGRPPAIFDLELEKAGI
SFSKKGIAVNEYLQSISNANIYAAGDAADSRGLPLTPVAVLEGHVVASNIIKGNKKKV
SYPPMPSVVFTLPTMATVGLLEDKAKEKGFDINVNFEKVGNWFNARRLNVDEYAFKTI
IDKNSNTILGAHLIGPHCEETINLFAMAIKTKMTISDLRTMIFSYPTMVSDLTYML"
misc_feature complement(355512..356855)
/locus_tag="RB2501_04890"
/note="Pyruvate/2-oxoglutarate dehydrogenase complex,
dihydrolipoamide dehydrogenase (E3) component, and related
enzymes [Energy production and conversion]; Region: Lpd;
COG1249"
/db_xref="CDD:31441"
misc_feature complement(<356730..356834)
/locus_tag="RB2501_04890"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(356118..356360)
/locus_tag="RB2501_04890"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
misc_feature complement(355515..355841)
/locus_tag="RB2501_04890"
/note="Pyridine nucleotide-disulphide oxidoreductase,
dimerisation domain; Region: Pyr_redox_dim; pfam02852"
/db_xref="CDD:202431"
gene complement(356856..357386)
/locus_tag="RB2501_04895"
/db_xref="GeneID:8454674"
CDS complement(356856..357386)
/locus_tag="RB2501_04895"
/codon_start=1
/transl_table=11
/product="copper-transporting ATPase"
/protein_id="YP_003193986.1"
/db_xref="GI:260060906"
/db_xref="GeneID:8454674"
/translation="MIAGTSGIASTFSWVEPFRPYLIGLTIIVLVFAWYQKLRPKTQE
EIDCVCEDDAKPTFWQSKQFLFIVTVFAGLMLAFPYYTNLFYAQPTKDIVYVSQSNIE
QHTFDVVGMTCAGCEAHVESEVNKLDGIISVKASYENANTIVEFDKTKTDLPAIRKAI
ESTGYKVVEKTTKENK"
misc_feature complement(357129..>357344)
/locus_tag="RB2501_04895"
/note="MerT mercuric transport protein; Region: MerT;
cl03578"
/db_xref="CDD:186578"
misc_feature complement(<356859..357083)
/locus_tag="RB2501_04895"
/note="Cation transport ATPase [Inorganic ion transport
and metabolism]; Region: ZntA; COG2217"
/db_xref="CDD:32399"
misc_feature complement(356886..357074)
/locus_tag="RB2501_04895"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:29471"
misc_feature complement(order(357039..357041,357048..357056))
/locus_tag="RB2501_04895"
/note="metal-binding site [ion binding]"
/db_xref="CDD:29471"
gene complement(357489..357860)
/locus_tag="RB2501_04900"
/db_xref="GeneID:8454675"
CDS complement(357489..357860)
/locus_tag="RB2501_04900"
/codon_start=1
/transl_table=11
/product="ArsR family transcriptional regulator"
/protein_id="YP_003193987.1"
/db_xref="GI:260060907"
/db_xref="GeneID:8454675"
/translation="MSLEITCTRNEADKKQISRCRETIENSSNSFKAVSKVLSLAGSE
VRLKILFLLNIENELCPCDIADILEMSVPAVSQHIRKMKDAGIIISRRDGQTLYYSLV
KNEDNILNGIFNSLSIRKRTA"
misc_feature complement(357543..357749)
/locus_tag="RB2501_04900"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature complement(order(357543..357545,357603..357605,
357693..357695,357705..357710,357717..357722,
357729..357731,357738..357740,357744..357749))
/locus_tag="RB2501_04900"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:28974"
misc_feature complement(order(357564..357572,357585..357593,
357609..357614,357618..357623,357630..357635,
357639..357650,357675..357683,357723..357731,
357741..357746))
/locus_tag="RB2501_04900"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature complement(order(357543..357545,357672..357674,
357681..357683))
/locus_tag="RB2501_04900"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
gene complement(357958..359922)
/locus_tag="RB2501_04905"
/db_xref="GeneID:8454676"
CDS complement(357958..359922)
/locus_tag="RB2501_04905"
/codon_start=1
/transl_table=11
/product="cation-transporting ATPase"
/protein_id="YP_003193988.1"
/db_xref="GI:260060908"
/db_xref="GeneID:8454676"
/translation="MKKKKVNLRDIGPKKHQGEHGREDGHNHNNPGRTSNFRTYLPAI
FSLVLLISGIAVDYFDTFPFFKGWIRIIWYSVAYIPVGFPVIREGWNSIRRGDFFTEF
FLMSLATLGAFAIGEYPEGVAVMLFYAVGELFQNAAVNRARGNIRALLDERPDHTLVF
RNGNFISVDPETVEIGERIQVRVGEKIALDGKLLSEKASLNTAAITGESKPDTINKGD
EVFAGSINLDGVVEIETIKEFKDSSIARILDMVQNATARKSKTELFIRKFARIYTPIV
VFLAIGLTFFPYFFVDDYVFRDWLYRALIFLVISCPCALVISIPLGYFGGLGAASRNG
ILFKGASFLDAMTKVNTVVMDKTGTVTKGVFKIKEIKSMVFEEAEFMKYLMAMEEQST
HPIAKAILEYKAAGSDYEATEVTEVAGKGLEGTVNGKSVLVGNKALMTANSIEVPSET
EGIVESIVMVATDRKFAGYVTIADELKEDAQRAIEQIRDAGISKIIMLSGDKDSITQQ
VSQELNIDWAKGGLLPEDKLNEVEILKKQPDTTVAFMGDGINDAPVLAASDVGIAMGG
LGSDVAIETADVIIQTDQPSKIARAVKIGRSTRNIVWQNIGLAFGVKIIVLILGAGGL
ATMWEAVFADVGVALLAIFNAVRLQRMTWD"
misc_feature complement(357973..359616)
/locus_tag="RB2501_04905"
/note="heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type
ATPase; Region: ATPase-IB2_Cd; TIGR01512"
/db_xref="CDD:211664"
misc_feature complement(358888..359556)
/locus_tag="RB2501_04905"
/note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
/db_xref="CDD:201018"
misc_feature complement(358180..358593)
/locus_tag="RB2501_04905"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:212620"
gene complement(360033..360449)
/locus_tag="RB2501_04910"
/db_xref="GeneID:8454677"
CDS complement(360033..360449)
/locus_tag="RB2501_04910"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193989.1"
/db_xref="GI:260060909"
/db_xref="GeneID:8454677"
/translation="MKEIERTLETKGVRPTAMRILVYKFLAEKDVALSLTDIENAFVK
AERTTLFRTLKTFEQNGVVHQIDDGTGIQKFALCEPGCNCDLEQDLHLHFHCNNCDET
VCLTQHKIPHINLPEGYVAEDANLVLKGICEKCSGQ"
misc_feature complement(360045..360449)
/locus_tag="RB2501_04910"
/note="Fe2+/Zn2+ uptake regulation proteins [Inorganic ion
transport and metabolism]; Region: Fur; COG0735"
/db_xref="CDD:31078"
misc_feature complement(order(360171..360173,360177..360179,
360222..360224,360354..360356))
/locus_tag="RB2501_04910"
/note="metal binding site 2 [ion binding]; metal-binding
site"
/db_xref="CDD:133478"
misc_feature complement(360270..360311)
/locus_tag="RB2501_04910"
/note="putative DNA binding helix; other site"
/db_xref="CDD:133478"
misc_feature complement(order(360078..360080,360129..360131,
360174..360176,360180..360182))
/locus_tag="RB2501_04910"
/note="metal binding site 1 [ion binding]; metal-binding
site"
/db_xref="CDD:133478"
misc_feature complement(order(360057..360083,360087..360095,
360120..360125,360159..360167))
/locus_tag="RB2501_04910"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133478"
misc_feature complement(order(360054..360056,360153..360155,
360162..360164))
/locus_tag="RB2501_04910"
/note="structural Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:133478"
gene complement(360446..361084)
/locus_tag="RB2501_04915"
/db_xref="GeneID:8454678"
CDS complement(360446..361084)
/locus_tag="RB2501_04915"
/codon_start=1
/transl_table=11
/product="integral membrane protein"
/protein_id="YP_003193990.1"
/db_xref="GI:260060910"
/db_xref="GeneID:8454678"
/translation="MNKKRKQNLKEARSLQIWNVIYDIIEVVVSLIAGFTANSSALIG
WGLDSTIEVISAGTLGWRLHGEIKGLDERLVAKRKMTTMYVIAISFALICLFISYDSI
TKLMSQETASWSTTGIVILIVSLWVNPILIYYKRMYGHKLDSPALLADAKDTFICLYQ
TVVVLIGLLLVKWLGWWWADPVAALLIVPYAAKEGWAAFIKARKIKDNEDIE"
misc_feature complement(<360470..361003)
/locus_tag="RB2501_04915"
/note="Cation efflux family; Region: Cation_efflux;
cl00316"
/db_xref="CDD:213092"
gene complement(361089..362291)
/locus_tag="RB2501_04920"
/db_xref="GeneID:8454679"
CDS complement(361089..362291)
/locus_tag="RB2501_04920"
/codon_start=1
/transl_table=11
/product="cation efflux system protein"
/protein_id="YP_003193991.1"
/db_xref="GI:260060911"
/db_xref="GeneID:8454679"
/translation="MKNLFIYTLIGLFVMSFGLTACGDSNSETKESTKSRSALEQANS
KSEVDKVLLTKHQFEALHMAIDTLKMRNMSGYVEANGQLEVPPQNEATITSVVGSNVV
SIEVLEGDQVTKGQTVAYLSHPNIIEKQTDYLNAYSNSQFLKKEYERQKTLYVAGVGS
GANFQKAEAEYQASRSLVNGLEAQLLQLNISASGLRNGKIYQRVALQSPIAGFVQKVE
IKTGQFVEPQTDLMEIVDTHHVHADLMVFEKDVYKVAEGQLVRFNVQSIPGKELTAEI
YSVGKTFEQNPKAIHVHAEIEDKEGKLIPGMYIQGRIQTENTMTTAIPESAIASDGNK
FFVFSAVKEGDGWAFIPCEVAKSTQDGEWVAIEFLTEQEPNTRYAFNNAYYLMAEIKK
GENEEEGH"
misc_feature complement(361179..362093)
/locus_tag="RB2501_04920"
/note="HlyD family secretion protein; Region: HlyD_2;
pfam12700"
/db_xref="CDD:205028"
misc_feature complement(361374..361676)
/locus_tag="RB2501_04920"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene complement(362293..366630)
/locus_tag="RB2501_04925"
/db_xref="GeneID:8454680"
CDS complement(362293..366630)
/locus_tag="RB2501_04925"
/codon_start=1
/transl_table=11
/product="transport-related, membrane protein"
/protein_id="YP_003193992.1"
/db_xref="GI:260060912"
/db_xref="GeneID:8454680"
/translation="MIDRIIDFSINNKFIIGLLTLALIGAGTYSMTQVPIDAVPDITN
NQVQVITQSPNLGTEDIEQFVTYPVEVAMSNLPSVKEIRSISRFGLSVVTIVFDDKMG
TYLPRQLVSEKLTEVREAIPEGFGQPSIGPITTGLGEVYQYTLKVESEFQDKYSLTDL
RTMQDWIVQRQMAMVPGVVEINAIGGKIKQYEVAVNPNDLKAIGLTITDVFKALESNN
KNTGGAYIEKNHQANFIRGEGLVRSLDDIKKIVIKNENGVPVTVSDVAEVRFGSAVRY
GALTQDGEGEVVGGLVMMLKGANSNEVIVRVKERMAEIQKSLPEGVIIEPLLDRSKLI
NETTGTVRNNLLEGALIVIFVLVFLLGNWRGGLIVASTIPLSLLFAFILMNVFDVWAN
LMSLGAIDFGIIVDGAVIIVEASVFLMGSYLLKKKALNRADRDEIAANASKKMMNAAF
FGQLIILIVFLPILALEGVEGKMFRPMALTFIFAMIGAMVLCLTYVPMMSALFLKPPK
TKKKTWGDRFVLWVQRKYEPLLVNALKKGKWVVGIAVALFAVATFVFSRMGGEFIPQL
DEGDIAFHTILKPGSSLSETIETTTKVERIVMAEFPEVEKIVSRIGVAEVPTDPMPMD
FADVFVILKPRDEWVSAASKDELIAKMKEAVSIIPGVNYEFTQPIEMRFNELLEGIRE
DVAIKIYGEDIDVLASKADEITQIIAGTDGIGDMRAEATSGLPQMTIKYNRDKLAQYG
VSIDQLNMMVQSAFAGGYAGVIFEGEKRFDLVVRLHEQNRSDINDIRKLYISLPNGSQ
IPLQELAAIEYIPGPMQISRDNTNRRTYVGVNVRGRDVESLVNEIKDKLDANLDLPPG
YFIRYGGAFENLERASERLQTVVPVALLLIFILIYFALKSFPQSLMIYLAIPMATIGG
VFALWLRDMPFSISAGVGFIVLFGVAVLNGLVMISGFNELKQEGVADLNVRILEGTKR
RVRPIMLTAFTDILGFLPMAISGSAGAEVQRPLATVVIGGLISSTLLTLLILPIFYQW
VENRSERERKLNSKLVSAMAVAGLLFTSTFAKAQQEQDSLPIISIEQAGKIARENYPL
LKTKQLEIQKQNTLKGTAYDLGKTQVFTGGEEVGDGQGIYTIVGIGQQSINLFGIGAK
RRLQKQRIALAETAHDLTGLQVEQEAKKAWSQAYQQRQKYELYRELDSIYALFEKAVE
LNFEVEAISRLEYASAINQALQISNKLQQAESDYLIALQKLNLWLVSDTYYTVPGKLD
EREIGAVSLDVDLAKHPELALSQKRIDEAEANYRVARTDLLPNFNLQGGLQQVSGENG
FYTYQAGLSLPLFSGTLRSEAKAAKIDSEIAREQANFIQRQLQSEYRQAVQTHQKWKT
SWQFYRDKALPLAGEQRIGALLAYTEGAVDYAAFTQIIRDAINTEMEALNTLDNYLKS
VFELQYFNQ"
misc_feature complement(363511..366630)
/locus_tag="RB2501_04925"
/note="Putative silver efflux pump [Inorganic ion
transport and metabolism]; Region: COG3696"
/db_xref="CDD:33492"
misc_feature complement(362884..363408)
/locus_tag="RB2501_04925"
/note="Outer membrane efflux protein; Region: OEP;
pfam02321"
/db_xref="CDD:202204"
misc_feature complement(362302..362808)
/locus_tag="RB2501_04925"
/note="Outer membrane efflux protein; Region: OEP;
pfam02321"
/db_xref="CDD:202204"
gene 366805..366942
/locus_tag="RB2501_04930"
/db_xref="GeneID:8454681"
CDS 366805..366942
/locus_tag="RB2501_04930"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193993.1"
/db_xref="GI:260060913"
/db_xref="GeneID:8454681"
/translation="MGEVILWYCELKRFEMRYPKIYGMNVTAMALTKWGAKFAIKIVI
V"
gene complement(367231..367557)
/locus_tag="RB2501_04935"
/db_xref="GeneID:8454682"
CDS complement(367231..367557)
/locus_tag="RB2501_04935"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193994.1"
/db_xref="GI:260060914"
/db_xref="GeneID:8454682"
/translation="MAKLDEIAELLTEEIHSFEKSVNKLETLQASLKDYKLEPDISLV
NKILWEYHEIQRKRHFELEKIVLGINNKIEKAQTIPGWQVKLFWAWSFLNLLGWGITI
VFLLKT"
gene complement(367563..368432)
/locus_tag="RB2501_04940"
/db_xref="GeneID:8454683"
CDS complement(367563..368432)
/locus_tag="RB2501_04940"
/codon_start=1
/transl_table=11
/product="mobilization protein"
/protein_id="YP_003193995.1"
/db_xref="GI:260060915"
/db_xref="GeneID:8454683"
/translation="MIGKGKSIAHTRASVAYGMKQEKEFEVILKEFLSGDNPSEIAEE
FRLVQEQNQRCTKNTLSFVLSPTIEDGKGLDTEDLKEITKRFMEAMQLQDRQAIAFVH
RNREHTHIHLYVNRIDFHGKAYKDNYIGKRSQLAAEKVARDMGLSTARDIQELKLEEL
KGIRSEIKAIHDKVFAKSSIRSFDTYIAQMQQKEVHIEPYINKQGALQGFRFQYKGHD
LKGSAVHRSLSAGNIAKQMNLGSLEVQRIKKDRTILISGKTLSLSPNLATTIVKKALK
LALKKVRSASIEL"
misc_feature complement(367722..368414)
/locus_tag="RB2501_04940"
/note="Relaxase/Mobilisation nuclease domain; Region:
Relaxase; cl01584"
/db_xref="CDD:174650"
gene complement(368429..368725)
/locus_tag="RB2501_04945"
/db_xref="GeneID:8454684"
CDS complement(368429..368725)
/locus_tag="RB2501_04945"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003193996.1"
/db_xref="GI:260060916"
/db_xref="GeneID:8454684"
/translation="MKREFVQFRCTVYEKKHLKVKARKSGLSLSEFCRRAAFEDQIIE
RLTQEQIEAYKMLVKYENNFKRIGNMFRQRNPGLADEVSQLADEIRMHLLSFKK"
gene complement(368846..369127)
/locus_tag="RB2501_04950"
/db_xref="GeneID:8454685"
CDS complement(368846..369127)
/locus_tag="RB2501_04950"
/codon_start=1
/transl_table=11
/product="excisionase"
/protein_id="YP_003193997.1"
/db_xref="GI:260060917"
/db_xref="GeneID:8454685"
/translation="MDNSMILERLDRIELLLSFHKEVLTFEEACLYTGMSRSYLYKLT
ASGIIPHSKPNGKLIFFEKAKLNSWLLRNNRKAQFEIEDAALRYSFRNR"
misc_feature complement(368909..369061)
/locus_tag="RB2501_04950"
/note="Helix-turn-helix domain; Region: HTH_17; pfam12728"
/db_xref="CDD:205047"
gene 369155..369520
/locus_tag="RB2501_04955"
/db_xref="GeneID:8454686"
CDS 369155..369520
/locus_tag="RB2501_04955"
/codon_start=1
/transl_table=11
/product="ribose-phosphate pyrophosphokinase"
/protein_id="YP_003193998.1"
/db_xref="GI:260060918"
/db_xref="GeneID:8454686"
/translation="MNKSAFVFIEEFLKEVRKSSLRSAPRNSNFIHIFFRLKSDNQMK
TMENKPNYQNSISFKMHWILSEKNDLKIKRIGVINRLFSPSGKMDPLQAAKMGRNTLK
GRINEMKSVNTICFEKQRI"
gene complement(369609..369690)
/locus_tag="RB2501_t10162"
/db_xref="GeneID:8454687"
tRNA complement(369609..369690)
/locus_tag="RB2501_t10162"
/product="tRNA-Leu"
/codon_recognized="UUG"
/db_xref="GeneID:8454687"
gene 369835..370776
/locus_tag="RB2501_04960"
/db_xref="GeneID:8454688"
CDS 369835..370776
/locus_tag="RB2501_04960"
/note="catalyzes the formation of 5-phospho-alpha-D-ribose
1-phosphate from D-ribose 5-phosphate and ATP"
/codon_start=1
/transl_table=11
/product="ribose-phosphate pyrophosphokinase"
/protein_id="YP_003193999.1"
/db_xref="GI:260060919"
/db_xref="GeneID:8454688"
/translation="MSYTVPEPKLFACTQSQALGKEIAKAYGADLGKVIFSRYSDGEF
QPSFEESIRGARIFIIGSTHPGPEHLMEMLLMLDAAKRASARHITAVMPYFGWARQDR
KDKPRVPIAAKLVAKMLETAGATRIITMDLHADQIQGFFEKPVDHLFASTLFLPYLRK
LKLDNLTIASPDMGGSKRAYAYSKALESDVVICYKQRAKANVISHMELIGDVADKNVV
LVDDMVDTAGTLTKAADLMMERGAKSVRAITTHGLLSGSAYERIENSRLEELIITDSI
PPRQESPKVKVLSCAELFADVMHRVHHNTSIASKFLM"
misc_feature 369859..370767
/locus_tag="RB2501_04960"
/note="ribose-phosphate pyrophosphokinase; Provisional;
Region: PRK01259"
/db_xref="CDD:179265"
misc_feature 369859..370203
/locus_tag="RB2501_04960"
/note="N-terminal domain of ribose phosphate
pyrophosphokinase; Region: Pribosyltran_N; pfam13793"
/db_xref="CDD:205966"
misc_feature 370282..370617
/locus_tag="RB2501_04960"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(370348..370350,370354..370356,370495..370503,
370507..370521,370591..370593)
/locus_tag="RB2501_04960"
/note="active site"
/db_xref="CDD:206754"
gene 370951..371463
/locus_tag="RB2501_04965"
/db_xref="GeneID:8454689"
CDS 370951..371463
/locus_tag="RB2501_04965"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L25"
/protein_id="YP_003194000.1"
/db_xref="GI:260060920"
/db_xref="GeneID:8454689"
/translation="MYTPNAHTVVIEFEDGRKIDAVLQDIQFHPVTDNILHVDFYQLF
PDKEVTMKIPVRLLGNSPGVRNGGRLLFRKRKLVIRALPKNLPDFFNVDISNLKIGDL
VAVDTLKSDEFTILHPDTTVVVQVKTQRKAIVIETDEEDEEGLEGEEAAAAEGAEGEA
SEEPAAEAQE"
misc_feature <370951..>371253
/locus_tag="RB2501_04965"
/note="50S ribosomal protein L25/general stress protein
Ctc; Reviewed; Region: PRK05618"
/db_xref="CDD:180166"
misc_feature <370963..371076
/locus_tag="RB2501_04965"
/note="Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding
domain; Region: Ribosomal_L25_TL5_CTC; cd00495"
/db_xref="CDD:198379"
misc_feature order(370975..370977,371008..371010,371020..371022,
371071..371076)
/locus_tag="RB2501_04965"
/note="CTC domain interface [polypeptide binding]; other
site"
/db_xref="CDD:198379"
misc_feature order(371014..371019,371026..371028,371047..371049,
371071..371073)
/locus_tag="RB2501_04965"
/note="L16 interface [polypeptide binding]; other site"
/db_xref="CDD:198379"
gene 371635..372201
/locus_tag="RB2501_04970"
/db_xref="GeneID:8454690"
CDS 371635..372201
/locus_tag="RB2501_04970"
/note="Enables the recycling of peptidyl-tRNAs produced at
termination of translation"
/codon_start=1
/transl_table=11
/product="peptidyl-tRNA hydrolase"
/protein_id="YP_003194001.1"
/db_xref="GI:260060921"
/db_xref="GeneID:8454690"
/translation="MKKFLIAGLGNIGDEYAETRHNIGFRILDHLSRSEDFSFESARL
GEVGTWKVKGRSLLCLKPATYMNRSGRAVQYWLDKEKIPLQNLLVVTDDLNLPFGTLR
LKTKGSDGGHNGLKDIQQILGTTGYARFRFGIGSEFSKGRQVDYVLGKWEEAEQEALP
ERLDRSAELIRSFALAGPGITMNQFNNT"
misc_feature 371647..372153
/locus_tag="RB2501_04970"
/note="Peptidyl-tRNA hydrolase (PTH) is a monomeric
protein that cleaves the ester bond linking the nascent
peptide and tRNA when peptidyl-tRNA is released
prematurely from the ribosome. This ensures the recycling
of peptidyl-tRNAs into tRNAs produced through...; Region:
PTH; cd00462"
/db_xref="CDD:73208"
misc_feature order(371665..371667,371695..371697,371827..371832,
371908..371910,371968..371970)
/locus_tag="RB2501_04970"
/note="putative active site [active]"
/db_xref="CDD:73208"
misc_feature 371695..371697
/locus_tag="RB2501_04970"
/note="catalytic residue [active]"
/db_xref="CDD:73208"
gene complement(372235..372900)
/locus_tag="RB2501_04975"
/db_xref="GeneID:8454691"
CDS complement(372235..372900)
/locus_tag="RB2501_04975"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194002.1"
/db_xref="GI:260060922"
/db_xref="GeneID:8454691"
/translation="MLVFGWLLVSCGSDDSPKVPPAVSLAYPENNSECTTGISRSETT
SEVEFRWADTPHAVRYELTVRNLQTNVTENVITSGLSASLVLEKGTAYSWNVIARSES
GMDGPAGGAWQFFNAGSALTYPPFPAQHKDPVSGETVTPDASGEVTLRWDGADADNDL
VEFEIYFGTDASNLSLEQTVGSGQLSLVVPVQSGGVYYWEILSRDSEGNTSRSGVSSF
RVF"
gene complement(372915..376622)
/locus_tag="RB2501_04980"
/db_xref="GeneID:8454692"
CDS complement(372915..376622)
/locus_tag="RB2501_04980"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194003.1"
/db_xref="GI:260060923"
/db_xref="GeneID:8454692"
/translation="MWERDNAIQLRRTASGELLKPQEGSGFTLDEMGMRRALEELNGN
PGSAKRMYFPDSRGELQPYLVRERSVMAPELQERYPEIRSYLGVSPENPARRIRFSMS
PSGFQGMVSEPGREASGFLEKVPGSGARYLLYRRDQKEALPSAWKCGTRAYREFAKPA
SSRAAKLVDDQLLRTYRLAVATTGEYAEYHGGTVGSALSAVNATLTRINEVFETDLAI
SLVLVAGNDQVIYTDPSTDPFGGNFSSEVQTTLDAQIGSANYDIGHLFHRGSEAGNAG
FIGAVCSENRKGSAYAATPTPEGDRFDLDFVAHEMGHQFGANHTWSFDSEGSGVQAEP
ASGTTIMGYAGIAEGNNVAQQGDDYFHYFSIVQIAQYVAGTSCASTTALANNPPAVNP
LPDYFIPAGTAFVLEADASDPDASDILTYAWEQVDDGVVTRASFGPQNPSGANFRSLP
PGVSPSRYFPRLSRVASGNLTQVSPASGSAWETVSEIERDMTFALTVRDNAPGGGQVA
SDLVSVRVVSQPDAFRVISQQSTQNFAGGSIQTISWETGATNQAPINCQEVDIFLSLN
SGQDFPVLLASGVPNTGSAQVQLPGTATTGGRIMVKASDNIFFSVNQADFTITQQPFV
LAAQELEAVGCQPVDAVYDFTYHNFDGFAEEVTLGVSGLPAGLGSGFSSPTVQTDGTD
LTLTITNTAAAAPGLYPLVITGTAPGGNFNLPVQLRLTDGSFTAPALLSPEADATDVG
LVPRLQWEATQEATSYRVQLALDAGFSGILVDEVVYLAEYQPEELLPDTTYFWRVRPI
NDCGQGAFGAAASFRTIATDCKTLTAQGTPITISSTGTPTVTSSIFFADDQTVIGARV
GLDLSHSYLADLVIKLRSPAGTEITLISNSCAEANDVDATFDADAPSFICGNNPAISG
LVRPLGSLNAFDGESSFGEWVLIVEDTAPADGGALNGFSLELCVEGQFRPDADGDGVF
DDGDDLCPGTPPGAVVDANGCPVYRFAPDQFDIAISGEKCVGTDDGAIRVTASRSLDY
TITIRGNGLDESGAFSNSFELRNLATGQYDICISGTDGPITYEAQCYTVTIGSPDPLS
VLVSRSAGGSGIDLDLDGAVSYVVSLNGEERTVGSGPLHLELQPGNNDLKVTAVPACK
GSYEASYFSSDSISAAPNPFSDRIGLYLPDIREPVTLELFNTSGRLLYRSARQPLSHN
EEFSLPVLPSGLYLLRVQSGQQEALLKVFRR"
misc_feature complement(375519..376043)
/locus_tag="RB2501_04980"
/note="Metallo-peptidase family M12B Reprolysin-like;
Region: Reprolysin_2; pfam13574"
/db_xref="CDD:205752"
misc_feature complement(order(375666..375668,375684..375686,
375693..375698))
/locus_tag="RB2501_04980"
/note="active site"
/db_xref="CDD:58567"
misc_feature complement(374772..375053)
/locus_tag="RB2501_04980"
/note="Ser-Thr-rich
glycosyl-phosphatidyl-inositol-anchored membrane family;
Region: GPI-anchored; pfam10342"
/db_xref="CDD:204452"
misc_feature complement(373761..374060)
/locus_tag="RB2501_04980"
/note="Proprotein convertase P-domain; Region:
P_proprotein; pfam01483"
/db_xref="CDD:201820"
misc_feature complement(372927..373136)
/locus_tag="RB2501_04980"
/note="Por secretion system C-terminal sorting domain;
Region: Por_Secre_tail; TIGR04183"
/db_xref="CDD:200434"
gene 376890..377684
/locus_tag="RB2501_04985"
/db_xref="GeneID:8454693"
CDS 376890..377684
/locus_tag="RB2501_04985"
/codon_start=1
/transl_table=11
/product="riboflavin biosynthesis protein RibF"
/protein_id="YP_003194004.1"
/db_xref="GI:260060924"
/db_xref="GeneID:8454693"
/translation="MQSTLLTFYPHPRMVLQKDSGLKLLNTIEEKTDILRETGLDCLV
IHPFTQRFSRLTATQFVREMLVEKLHTKKIIIGYDHRFGRNRTANIQDLEAFGNLFDF
SVEEISAQEVDEVSVSSTKIRKALEAGDLETANAYLGYPYMLSGTVRRGKGLGRNLGF
PTANLGIDSEYKLIPANGVYAVRSQLGDREVFGMMNIGSNPTVEDSGQHIEVHFFDLD
QDLYDQPLRVGLLARLRDERKFDSLEALKEQLSLDQQAARRAIRQR"
misc_feature 376893..377342
/locus_tag="RB2501_04985"
/note="FAD synthetase, N-terminal domain of the
bifunctional enzyme; Region: FAD_synthetase_N; cd02064"
/db_xref="CDD:185679"
misc_feature 376896..377648
/locus_tag="RB2501_04985"
/note="bifunctional riboflavin kinase/FMN
adenylyltransferase; Reviewed; Region: PRK05627"
/db_xref="CDD:180171"
misc_feature 377298..377648
/locus_tag="RB2501_04985"
/note="Riboflavin kinase; Region: Flavokinase; pfam01687"
/db_xref="CDD:190069"
gene 377681..379006
/locus_tag="RB2501_04990"
/db_xref="GeneID:8454694"
CDS 377681..379006
/locus_tag="RB2501_04990"
/codon_start=1
/transl_table=11
/product="gamma-glutamyl carboxylase-like protein"
/protein_id="YP_003194005.1"
/db_xref="GI:260060925"
/db_xref="GeneID:8454694"
/translation="MIRRLLYSRMDNSPLILFRMFYGVLLALECFGAIATGWVRRYLV
EPEFTFTFIGFEWLQPLPGPGMYVYYALMGLLGIAIALGYRYRLSIILFTLLWTGTYL
MQKTAYNNHYYLLILISGLMCFLPAHRARSLDAKRRPEIRTDTMYTAVKWTVVLQLFI
VYTYAAIAKIYDDWLDFSFIGLLMAGKADYPLIGTILQEPWVHRCIGLFGIAFDFLII
PLLLWKPTRKWAFGASIFFHLFNSVVFQIGIFPYLSLAFTAFFFEPETIRRTFFPTKA
AGQWQPPSGRPRYAGILLGVGALYFTLQVFLPIRHYAIPGDVLWTEEGHRMSWRMMLR
SRRGTIQFRIVDKATGISEPVKPENYLTPRQYRKVLAYPDFIWQFAQYLKKSYARQGK
DIAVYAAGNLRINRQPAAPFIDPEVDLAAEPWDHFRHHRWILPAPWELE"
misc_feature 377726..378985
/locus_tag="RB2501_04990"
/note="Vitamin K-dependent gamma-carboxylase; Region:
VKG_Carbox; cl02773"
/db_xref="CDD:198787"
gene 379094..380365
/locus_tag="RB2501_04995"
/db_xref="GeneID:8454695"
CDS 379094..380365
/locus_tag="RB2501_04995"
/note="catalyzes a two-step reaction, first charging a
serine molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="seryl-tRNA synthetase"
/protein_id="YP_003194006.1"
/db_xref="GI:260060926"
/db_xref="GeneID:8454695"
/translation="MLPLHTLRENPDSIAQALGKRGIDAQPMIQEVLELDKQRRTLQT
QLDATLAEANTLSREIGNLFKAGKSEEAQELKARSAKLKESSKALTESLNDAADTLQQ
ALYQVPNAPHTSVPAGTDEEDNEVVFTSGDLPQAGGSALPHWELAAQYDLIDFELGVK
ITGAGFPVYKGKCARLQRALVSFFLDRNTEAGYQEVQVPHLVNEASGLGTGQLPDKEG
QMYELRDDKLFLIPTAEVPVTNMLRDELMDLGDLPLCYTAYTPCFRREAGSYGAHVRG
LNRLHQFDKVEIVRVEEPGNSYAALEQMVEHVKGLLGELGLPYRILRLCGGDLGFTSA
LTYDFEVWSAAQERWLEVSSVSNFEAFQANRLKLRYRDENNKPQLAHTLNGSALALPR
ILACILEDYQDESGIRIPDVLVPYTGFDRIE"
misc_feature 379094..380359
/locus_tag="RB2501_04995"
/note="seryl-tRNA synthetase; Provisional; Region:
PRK05431"
/db_xref="CDD:180077"
misc_feature 379094..379426
/locus_tag="RB2501_04995"
/note="Seryl-tRNA synthetase N-terminal domain; Region:
Seryl_tRNA_N; pfam02403"
/db_xref="CDD:202232"
misc_feature 379460..380344
/locus_tag="RB2501_04995"
/note="Seryl-tRNA synthetase (SerRS) class II core
catalytic domain. SerRS is responsible for the attachment
of serine to the 3' OH group of ribose of the appropriate
tRNA. This domain It is primarily responsible for
ATP-dependent formation of the enzyme bound...; Region:
SerRS_core; cd00770"
/db_xref="CDD:29815"
misc_feature order(379562..379579,379586..379606,379616..379618,
379622..379624,379628..379630,379637..379639,
379673..379684,379688..379696,379700..379702,
379754..379759,379763..379765,379775..379777,
379802..379804,379814..379816,379826..379828,
379874..379876,379937..379939,380339..380344)
/locus_tag="RB2501_04995"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29815"
misc_feature order(379583..379585,379790..379792,379796..379798,
379883..379885,379889..379891,379907..379909,
379916..379918,379925..379927,379931..379933,
379940..379942,379946..379948,379952..379954,
380144..380155,380243..380245,380249..380251,
380267..380269)
/locus_tag="RB2501_04995"
/note="active site"
/db_xref="CDD:29815"
misc_feature 379673..379696
/locus_tag="RB2501_04995"
/note="motif 1; other site"
/db_xref="CDD:29815"
misc_feature 379880..379891
/locus_tag="RB2501_04995"
/note="motif 2; other site"
/db_xref="CDD:29815"
misc_feature order(380252..380260,380267..380269)
/locus_tag="RB2501_04995"
/note="motif 3; other site"
/db_xref="CDD:29815"
gene 380465..382249
/locus_tag="RB2501_05000"
/db_xref="GeneID:8454696"
CDS 380465..382249
/locus_tag="RB2501_05000"
/codon_start=1
/transl_table=11
/product="tetratricopeptide repeat domain-containing
protein"
/protein_id="YP_003194007.1"
/db_xref="GI:260060927"
/db_xref="GeneID:8454696"
/translation="MKQFLCSLAVLCLSVVSAQEDFLAKQYFNDGDFDKAVVYYEKLA
ENNPRRTDYTEGLVLCYHQLEAYDKAISFLSRRLEEGNAYPTLLIDMGYTYLLMDRPE
EAEKWYRQALETIESNPNFGYGIGFKFQRYTLLDYALQAYSRAMELNPELDFNFQIAR
IYGEQGRIGEMFDAYMDLLQQRESAKANVLRVIESFIGPDPEAENNQLLRRVLLTRAQ
KDPDPLWNELLSWLYLEQGQYANAFNQEKAIYRRVPEVRLDRMVNLGRSAEEAGAVEA
AVAAFEFVVAESNDPVSRLNARLHLIDIGLADNREKDLREAEQAYEELMDEYGYAAST
LQLQVAYAKFLAFRLSKPDRAIRILKNSLDLPLPEYAEGYVKLSLGDILVFDQRFNEA
LILFSQIQKLLKNDVMGQQARFKVAQTSFYKGDFDWALTQLKVLRNSTSQLIANDAMQ
LSLIISDNSLEDSTQTALRKYARADLLAYQQKNAEALAALDEILTGHKGEKIEDEALL
MHGRLLEAAGDYSGALLSYRKIVEFFGQDILADDAHFAMGELYRTRLEDPAKAMEHYR
EIIYRFQDSYHFPEARKQFRRLRGDPVN"
misc_feature 380531..380803
/locus_tag="RB2501_05000"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(380534..380536,380570..380572,380582..380584,
380591..380593,380636..380638,380672..380674,
380684..380686,380693..380695,380738..380740,
380774..380776,380786..380788,380795..380797)
/locus_tag="RB2501_05000"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature order(380537..380542,380627..380632,380636..380641,
380648..380653,380729..380734,380741..380746,
380753..380758)
/locus_tag="RB2501_05000"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 380603..380815
/locus_tag="RB2501_05000"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature 380723..381004
/locus_tag="RB2501_05000"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(380723..380725,380729..380734,380741..380746,
380831..380836,380840..380845,380852..380857,
380930..380935,380942..380947,380954..380959)
/locus_tag="RB2501_05000"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature order(380738..380740,380774..380776,380786..380788,
380795..380797,380840..380842,380876..380878,
380888..380890,380897..380899,380939..380941,
380975..380977,380987..380989,380996..380998)
/locus_tag="RB2501_05000"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature 382013..>382207
/locus_tag="RB2501_05000"
/note="tol-pal system protein YbgF; Region: tol_pal_ybgF;
TIGR02795"
/db_xref="CDD:188247"
gene 382275..382589
/locus_tag="RB2501_05005"
/db_xref="GeneID:8454697"
CDS 382275..382589
/locus_tag="RB2501_05005"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194008.1"
/db_xref="GI:260060928"
/db_xref="GeneID:8454697"
/translation="MIIYNVTINVEDAIRKEWLEWMRTTHIPDVIATGAFKNARICRV
LVEEEMGGTTYSVQYLAPDRQSLEAYYGEHAARLRQEVTDRYGDRLVAFRTELEIISE
HE"
misc_feature 382281..382574
/locus_tag="RB2501_05005"
/note="Domain of unknown function (DUF4286); Region:
DUF4286; pfam14114"
/db_xref="CDD:206283"
gene 382611..383576
/locus_tag="RB2501_05010"
/db_xref="GeneID:8454698"
CDS 382611..383576
/locus_tag="RB2501_05010"
/codon_start=1
/transl_table=11
/product="dimethyladenosine transferase"
/protein_id="YP_003194009.1"
/db_xref="GI:260060929"
/db_xref="GeneID:8454698"
/translation="MSMARYPIRGSGTGHSAVNLRPEIPHPMSRDRGKRRSPAKKGGG
MGRKGDTQRTTGVRAKKHLGQHFLTDASVAMRIAGTLSPDGPPRILEIGPGTGVLTAF
LLRRPVDLLAVELDGESVKYLREVFPLELASETTSYKSFEVLHGDFLKLDLPGLFGGK
PFAVTGNFPYNISTQIVFRVLENRERIPEFSGMFQREVAERICAGPGSKTYGILSVLV
QAYYLAEYRFTVPPEVFDPPPKVESGVLHLRYRTDTRADWDYQHLTRLVKTAFNQRRK
TLRNSLKSLPVPDYLKEDAIFDRRPEQLEVREFIALSKRIWDDTV"
misc_feature 382872..383159
/locus_tag="RB2501_05010"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(382884..382904,382950..382955,383046..383054,
383109..383111)
/locus_tag="RB2501_05010"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 383563..384915
/locus_tag="RB2501_05015"
/db_xref="GeneID:8454699"
CDS 383563..384915
/locus_tag="RB2501_05015"
/codon_start=1
/transl_table=11
/product="transmembrane Mg2+ transporter"
/protein_id="YP_003194010.1"
/db_xref="GI:260060930"
/db_xref="GeneID:8454699"
/translation="MTPFKLTDELLAEIQQLIENRQNDSLRSLMEEVHYADVAEIIDE
LHEDQATYLIKLLDSEKTSDVLTELDEDVREAILGNLSSQEIAGELAELDTDDAADIV
AELPKEIVQEVISKISDREHARDIVDLLRYDENSAGGLMAKELVKVYDHWTVLTCVKE
MRQQAENVTRVHSIYVVNDQGILIGRLSLKDLLTASTRSPIRDIYISHVDSVNVNEKP
EEVARIMSKYDLEAIPVVDEIGRLVGRITIDDIVDVIREEADRDYQMAAGISQDVEAD
DSIWDLTRARLPWLFLGLIGGLGAAAIMGGFEEMIARHAILFFFTPLIAAMAGNVGVQ
SSAIIVQGLVNDDLKGSVGNRLIKEMLLALLNGVILAVGLLVFTWIWKGSFPTALAIS
ISLIAVIVVAGVIGTFTPLFLHKRGIDPAIATGPFITTSNDIFGILIYFWIARFVLGI
"
misc_feature 383569..384912
/locus_tag="RB2501_05015"
/note="Mg/Co/Ni transporter MgtE (contains CBS domain)
[Inorganic ion transport and metabolism]; Region: MgtE;
COG2239"
/db_xref="CDD:32420"
misc_feature 383662..383967
/locus_tag="RB2501_05015"
/note="MgtE intracellular N domain; Region: MgtE_N;
pfam03448"
/db_xref="CDD:146204"
misc_feature 384004..384303
/locus_tag="RB2501_05015"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domain in the
magnesium transporter, MgtE. MgtE and its homologs are
found in eubacteria, archaebacteria, and eukaryota.
Members of this family transport Mg2+ or other...; Region:
CBS_pair_Mg_transporter; cd04606"
/db_xref="CDD:73106"
misc_feature 384520..384894
/locus_tag="RB2501_05015"
/note="Divalent cation transporter; Region: MgtE;
pfam01769"
/db_xref="CDD:110745"
gene 384993..385940
/locus_tag="RB2501_05020"
/db_xref="GeneID:8454700"
CDS 384993..385940
/locus_tag="RB2501_05020"
/codon_start=1
/transl_table=11
/product="D-3-phosphoglycerate dehydrogenase"
/protein_id="YP_003194011.1"
/db_xref="GI:260060931"
/db_xref="GeneID:8454700"
/translation="MKKVLHLDENHPLLEEGLAALGFKNHRDHTGTRQEILEKIGAYH
GIIIRSRLPVDRELLDRAKNLEFIGRVGAGLENIDTRAAGERGIFLAAAPEGNRNAVG
EHALGMLLSLMNKLHTADAEVREGRWRREANRGVELDGKTVGIIGYGNTGQAFARKLR
GFDVQTLCYDIVGGVGNGDARQVGMPELMQHADVVSLHVPETPETIGMVDAGFLGGFA
KPIWLLNTARGKCVRTGDLVDALRTGRVLGAGLDVLEYEKSSFESLFGEDGMPPDMQE
LIRSPRVLLSPHVAGWTVESKEKLAATIVRKIKEHYQGK"
misc_feature 384993..385937
/locus_tag="RB2501_05020"
/note="Phosphoglycerate dehydrogenase and related
dehydrogenases [Amino acid transport and metabolism];
Region: SerA; COG0111"
/db_xref="CDD:30460"
misc_feature 385308..385862
/locus_tag="RB2501_05020"
/note="D-isomer specific 2-hydroxyacid dehydrogenase, NAD
binding domain; Region: 2-Hacid_dh_C; pfam02826"
/db_xref="CDD:202418"
gene 385988..386407
/locus_tag="RB2501_05025"
/db_xref="GeneID:8454701"
CDS 385988..386407
/locus_tag="RB2501_05025"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_003194012.1"
/db_xref="GI:260060932"
/db_xref="GeneID:8454701"
/translation="MWRTIWIFSALALAVWILLRIGRLGYYSGTTDPEWIFGSLAVLF
LLIGMGLQRHARPKPPSREADQRKIRQLGLTPRECEVLLPLCKGLSNREIADELHISE
STVKTHVSNLLVKLDVRRRTQVIRKARALNLLPEGSA"
misc_feature <386039..386389
/locus_tag="RB2501_05025"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:32379"
misc_feature 386207..386374
/locus_tag="RB2501_05025"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(386210..386218,386255..386263,386285..386290,
386294..386299,386303..386317,386348..386350)
/locus_tag="RB2501_05025"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(386243..386245,386249..386251,386255..386257,
386348..386356,386363..386365,386372..386374)
/locus_tag="RB2501_05025"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene 386508..387032
/locus_tag="RB2501_05030"
/db_xref="GeneID:8454702"
CDS 386508..387032
/locus_tag="RB2501_05030"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194013.1"
/db_xref="GI:260060933"
/db_xref="GeneID:8454702"
/translation="MKKTIIRYGLYGGTVICVLFLLSLYLADGLDFGAQEVIGYASMV
VALSFVYFGIRHFRDRENSGTLNFGAGLKIGLGISLITALMFGILDVIYVKYMNPDFM
ETYYASVLADLEASLPESEFQERARAMEAEKELFTNPLMNFFLMFITVFLIGLIMSII
SAQILKRKPSTATS"
misc_feature 386526..387011
/locus_tag="RB2501_05030"
/note="Protein of unknown function (DUF4199); Region:
DUF4199; pfam13858"
/db_xref="CDD:206029"
gene 387092..387547
/locus_tag="RB2501_05035"
/db_xref="GeneID:8454703"
CDS 387092..387547
/locus_tag="RB2501_05035"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194014.1"
/db_xref="GI:260060934"
/db_xref="GeneID:8454703"
/translation="MQYEATSADDYISQLPEERREPVSRLRETIRTHLPEGFEESISY
GMIGYVVPHARYPDGYHCNPELPLPFMSLASQKNYIAVYHSGIYADPELNQWFLDRYR
ALDIGKPDMGKSCIRFRKPDKIPYGLIGELCEKMEVEDWVRMYEKAIKK"
misc_feature 387143..387496
/locus_tag="RB2501_05035"
/note="Domain of unknown function (DU1801); Region:
DUF1801; pfam08818"
/db_xref="CDD:204074"
gene 387560..387949
/locus_tag="RB2501_05040"
/db_xref="GeneID:8454704"
CDS 387560..387949
/locus_tag="RB2501_05040"
/codon_start=1
/transl_table=11
/product="glyoxalase"
/protein_id="YP_003194015.1"
/db_xref="GI:260060935"
/db_xref="GeneID:8454704"
/translation="MEKRVTGLGGFFFKTKDPDHIKEWYKKHLGIPTDNYGWTFWWKD
ENGRDCSTQWSPFKMDTKYFEPSEKPFMMNFRVENLRELLAALREEGVQVVGEIEEYD
YGKFGWILDPEGNKIELWEPVDSAFLE"
misc_feature 387596..387919
/locus_tag="RB2501_05040"
/note="Glyoxalase-like domain; Region: Glyoxalase_2;
pfam12681"
/db_xref="CDD:205016"
gene 387996..388397
/locus_tag="RB2501_05045"
/db_xref="GeneID:8454705"
CDS 387996..388397
/locus_tag="RB2501_05045"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194016.1"
/db_xref="GI:260060936"
/db_xref="GeneID:8454705"
/translation="MSDENKDFGDKAREAGEDAKKAAGDFKSEAKKTADEFKEGLNSA
GGENKKILAGILAIVLGSLGVHKFILGYQKEGIILLVVTVIGMVLTCIGVGIFVVWAT
GLIGLIEGVIYLTKSDEEFYNTYQVGKKPWF"
misc_feature 388134..388319
/locus_tag="RB2501_05045"
/note="TM2 domain; Region: TM2; pfam05154"
/db_xref="CDD:203181"
gene 388521..388844
/locus_tag="RB2501_05050"
/db_xref="GeneID:8454706"
CDS 388521..388844
/locus_tag="RB2501_05050"
/codon_start=1
/transl_table=11
/product="ArsR family regulatory protein"
/protein_id="YP_003194017.1"
/db_xref="GI:260060937"
/db_xref="GeneID:8454706"
/translation="MGVSKTQLFDQRQNEIAQIARVLAHPARVAILQYISRQDSCICS
DLVEETGLAQATISQHLSEIKKVGLLRGNFQGRNLCYCIDTDRWNEIQGLFGSFFTRI
SSQCC"
misc_feature 388578..388772
/locus_tag="RB2501_05050"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature order(388578..388583,388587..388589,388596..388598,
388605..388610,388617..388622,388629..388631,
388722..388724)
/locus_tag="RB2501_05050"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:28974"
misc_feature order(388581..388586,388596..388604,388641..388649,
388677..388688,388692..388697,388704..388709,
388713..388718,388734..388742,388755..388763)
/locus_tag="RB2501_05050"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(388641..388643,388653..388655)
/locus_tag="RB2501_05050"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
gene 388954..389445
/locus_tag="RB2501_05055"
/db_xref="GeneID:8454707"
CDS 388954..389445
/locus_tag="RB2501_05055"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194018.1"
/db_xref="GI:260060938"
/db_xref="GeneID:8454707"
/translation="MKTSEFLNLLERHPERELNFEYAPGKLLRPDYHITEVKNIRVDA
TDCGGRSDAWTETVIQLWESPVPEHTDRSITARKALAILSRVNRKQPLMLDSPVKFEY
GNRQFHTAQLHVAGEVVEGDHLVLRLSPEATQCKASDICGTPEPAPVAGARNGCDPAS
GCC"
gene 389461..389952
/locus_tag="RB2501_05060"
/db_xref="GeneID:8454708"
CDS 389461..389952
/locus_tag="RB2501_05060"
/codon_start=1
/transl_table=11
/product="phosphinothricin N-acetyltransferase"
/protein_id="YP_003194019.1"
/db_xref="GI:260060939"
/db_xref="GeneID:8454708"
/translation="MQIRDMQPEDWHEVARIYEEGIATGYATFETRVPAYEDWDRAHL
PFGRLVAEISGQVAGWAALSPVSGRCVYGGVAEVSVYVSSAQRGKGTGKALLRKLIAE
SEQQGIWTLQSGIFPQNAGSIRLHEAVGFRRLGYREKIAKRDGIWQDNILFERRSKTV
GTD"
misc_feature 389461..389943
/locus_tag="RB2501_05060"
/note="Sortase and related acyltransferases [Cell envelope
biogenesis, outer membrane]; Region: COG1247"
/db_xref="CDD:31440"
misc_feature 389605..389784
/locus_tag="RB2501_05060"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(389698..389706,389734..389739)
/locus_tag="RB2501_05060"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 389987..390409
/locus_tag="RB2501_05065"
/db_xref="GeneID:8454709"
CDS 389987..390409
/locus_tag="RB2501_05065"
/codon_start=1
/transl_table=11
/product="protein tyrosine phosphatase"
/protein_id="YP_003194020.1"
/db_xref="GI:260060940"
/db_xref="GeneID:8454709"
/translation="MKNILVLCTGNSCRSQMAHGYLEALQSEPAARIYSAGVETHGLN
PDAVRFMAEDGIDISGHTSNHVDEYEGIAWDYIITVCDHARENCPFIPAPGAKRLHQN
FSDPSKVTGSEAEKREAFIAARDQIKAYCRDFIERELR"
misc_feature 389990..390394
/locus_tag="RB2501_05065"
/note="Low molecular weight phosphatase family; Region:
LMWPc; cd00115"
/db_xref="CDD:29014"
misc_feature 389996..390391
/locus_tag="RB2501_05065"
/note="Low molecular weight phosphotyrosine protein
phosphatase; Region: LMWPc; pfam01451"
/db_xref="CDD:201802"
misc_feature order(390008..390010,390014..390019,390023..390031)
/locus_tag="RB2501_05065"
/note="active site"
/db_xref="CDD:29014"
gene complement(390387..392222)
/locus_tag="RB2501_05070"
/db_xref="GeneID:8454710"
CDS complement(390387..392222)
/locus_tag="RB2501_05070"
/codon_start=1
/transl_table=11
/product="hemolysin"
/protein_id="YP_003194021.1"
/db_xref="GI:260060941"
/db_xref="GeneID:8454710"
/translation="MSLVTAKEVSRAINLDRYGFLGTLMGWVLMQITRISSINRFYKR
HRHLEGTEFLERILEHYEIDFEIPEEDIKRLPKEGAFITISNHPLGGIDGVLLLKLLL
QHRQDYKIIANFLLQRIEPLAPFIMPVNPFENHRDAKSSVAGFKRSMEHLGGGHPLGI
FPAGEVSTYKEGQHFVDKPWEEAALKLIRRAEVPVVPIYFHARNSRLFYYLSRINDIF
RTAKLPSELTTQRNRSIKVRIGHPISVAVQKEHDTLEEFSDLLRRKTYLLANAYERER
LIDQIPGSLKIPKPPRRIADAVRSEVIQGEIEKLREKNCRLLQNRNYEVFLAQKKDMP
FILQEIGRQREVTFRAIGEGTNKSIDLDRFDDYYHHLFLWDDQEKKIVGAYRMGMGSE
IFEKYGIDGFYLQDLFRFEPELFGMMSRSIEMGRAYIVKEYQQKPMPLFLLWKGIVHT
TLRHPEHQYLIGGVSISNQFSNFSKSLMIEFMKSHYWDPYVAQYIRPKKEFKVKLNDA
DKEFVFDETESDLNKFDKLIEEVEPGSLRLPVLIKKYIKQNARVVAFNVDPLFNNSVD
GLMYIRIADLPEDTVKPVMEEFQAELERRLAEGAGGEQASGAPAQ"
misc_feature complement(391425..392051)
/locus_tag="RB2501_05070"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: Unknown ACT14924;
Region: LPLAT_ACT14924-like; cd07986"
/db_xref="CDD:153248"
misc_feature complement(order(391725..391733,391878..391889,
391944..391946,391953..391955,391962..391964))
/locus_tag="RB2501_05070"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153248"
misc_feature complement(390891..391193)
/locus_tag="RB2501_05070"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_5; pfam13444"
/db_xref="CDD:205622"
gene complement(392324..393574)
/locus_tag="RB2501_05075"
/db_xref="GeneID:8454711"
CDS complement(392324..393574)
/locus_tag="RB2501_05075"
/codon_start=1
/transl_table=11
/product="aspartate kinase III"
/protein_id="YP_003194022.1"
/db_xref="GI:260060942"
/db_xref="GeneID:8454711"
/translation="MRVFKFGGASVKDADGVRNVLKVLSETGTEKTFLVVSAMGKTTN
AMEAVVRAYFEDKGTLAAALDEVVAYHLGIAGELFPAEGHPVFDRLRGLFEEVRGFLA
WNKSPKYGFVYDQVVGYGELLSTVIVSAFLEDSGIANTWLDIRKYIKTDSNYRDGNVQ
WERTQEAIATLAPGKELFITQGFLGSDENNFTTTLGREGSDYTAAIIAYCLNAQSVTI
WKDVPGVLNADPRYFEQASLLNRISYREAIELAFYGASVIHPKTLQPLQRKEIPLHVK
SFLKPADPGTTVGSGKGIEPEVPCFIVKKDQVLMRLSSLDFSFIVEDSIGDLFKLLHD
HRMKVDMIQNSAISFSVCIDNKFGRLPELLQQLRGRFKVVHHENVSLYTIRHFNAEAI
RSLQNGREVLLEQRSKETVQLVVK"
misc_feature complement(392708..393574)
/locus_tag="RB2501_05075"
/note="AAK_AK-HSDH-like: Amino Acid Kinase Superfamily
(AAK), AK-HSDH-like; this family includes the N-terminal
catalytic domain of aspartokinase (AK) of the bifunctional
enzyme AK- homoserine dehydrogenase (HSDH). These
aspartokinases are found in such...; Region:
AAK_AK-HSDH-like; cd04243"
/db_xref="CDD:58609"
misc_feature complement(order(392798..392800,392837..392839,
392972..392974,393212..393214,393446..393448,
393560..393562))
/locus_tag="RB2501_05075"
/note="putative catalytic residues [active]"
/db_xref="CDD:58609"
misc_feature complement(order(392804..392809,392882..392884,
392888..392890,392897..392899,392912..392917,
393551..393556,393560..393562))
/locus_tag="RB2501_05075"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:58609"
misc_feature complement(order(392975..392986,393212..393214,
393446..393448,393464..393466))
/locus_tag="RB2501_05075"
/note="aspartate binding site [chemical binding]; other
site"
/db_xref="CDD:58609"
gene complement(393561..394049)
/locus_tag="RB2501_05080"
/db_xref="GeneID:8454712"
CDS complement(393561..394049)
/locus_tag="RB2501_05080"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase"
/protein_id="YP_003194023.1"
/db_xref="GI:260060943"
/db_xref="GeneID:8454712"
/translation="METSIRPAEEADMKEVYRLIRELAVYEREPDAVEVTEQQLLRDG
FGPDPKFRCFVAERDGGIVGMALIYPRYSTWKGPAIHLEDLIVTEEARGLGVGSALLT
EVIRYASGQGVKRVCWEVLDWNEPAIDFYEARGARVLRDWDVVQLDEAGIEAYLKEYA
SI"
misc_feature complement(393630..394037)
/locus_tag="RB2501_05080"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_8; pfam13523"
/db_xref="CDD:205701"
misc_feature complement(393702..393893)
/locus_tag="RB2501_05080"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature complement(order(393756..393761,393789..393797))
/locus_tag="RB2501_05080"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 394164..395171
/locus_tag="RB2501_05085"
/db_xref="GeneID:8454713"
CDS 394164..395171
/locus_tag="RB2501_05085"
/note="catalyzes the formation of D-fructose 6-phosphate
from fructose-1,6-bisphosphate"
/codon_start=1
/transl_table=11
/product="fructose-1,6-bisphosphatase"
/protein_id="YP_003194024.1"
/db_xref="GI:260060944"
/db_xref="GeneID:8454713"
/translation="MQRKNKTLGEFIIENQQEFQYSTGELSKLINAIRLAAKVVNHEV
NKAGLVDILGAAGETNIQGESQQKLDVLANEKFKQTLQNREIVCGIASEEEDDFITIN
SQDEQHQNKYVVLIDPLDGSSNIDVNVSVGTIFSIYRRVTPIGSPVSLEDFLQPGVNQ
VAAGYIIYGTSTMLVYTTGHGVNGFTLNPAIGTFYLSHPNMQFPETGRIYSVNEGNYT
HFPQGVKDYIKYCQKEEDDRPYTSRYIGSLVSDFHRNMIKGGIYIYPKSSTAFNGKLR
LLYECNPMAYLAEQAGGRASDGYRRILEITPTELHQRVPFFCGSRKMVEKAESFMAQY
A"
misc_feature 394197..395156
/locus_tag="RB2501_05085"
/note="Fructose-1,6-bisphosphatase, an enzyme that
catalyzes the hydrolysis of fructose-1,6-biphosphate into
fructose-6-phosphate and is critical in gluconeogenesis
pathway. The alignment model also includes chloroplastic
FBPases and sedoheptulose-1; Region: FBPase; cd00354"
/db_xref="CDD:30130"
misc_feature order(394197..394199,394206..394208,394230..394232,
394236..394244,394494..394499,394578..394580)
/locus_tag="RB2501_05085"
/note="AMP binding site [chemical binding]; other site"
/db_xref="CDD:30130"
misc_feature order(394371..394373,394440..394445,394512..394514,
394518..394520,395001..395003)
/locus_tag="RB2501_05085"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:30130"
misc_feature order(394521..394523,394527..394532,394809..394811,
394890..394895,394905..394907,394953..394955,
394983..394985)
/locus_tag="RB2501_05085"
/note="active site"
/db_xref="CDD:30130"
gene complement(395225..395653)
/locus_tag="RB2501_05090"
/db_xref="GeneID:8454714"
CDS complement(395225..395653)
/locus_tag="RB2501_05090"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194025.1"
/db_xref="GI:260060945"
/db_xref="GeneID:8454714"
/translation="MPILDLYNHSEKRRNLAHFAAIASLAAVDGAVNPAEKEILDRFA
QKLNITDAEYKEVMKKENKYPIEAPFEMKKRYERLYDFFRIIFSDHGIDAEEEDLVRK
YAIGIGFSSEMADKVLKSSTEIFSGQIPFEDYLLLMERRK"
misc_feature complement(395324..>395572)
/locus_tag="RB2501_05090"
/note="tellurium resistance terB-like protein; Region:
terB_like; cl11965"
/db_xref="CDD:209401"
misc_feature complement(order(395366..395368,395387..395389,
395396..395398,395546..395548,395567..395569))
/locus_tag="RB2501_05090"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143581"
gene 395882..396895
/locus_tag="RB2501_05095"
/db_xref="GeneID:8454715"
CDS 395882..396895
/locus_tag="RB2501_05095"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194026.1"
/db_xref="GI:260060946"
/db_xref="GeneID:8454715"
/translation="MEKPLLEFTDRGIYCPPADVYLDPWKPVDRALISHGHADHSRPG
HGRYITHHRNVPIIRHRLGDIRVSGREWGESFTVNGVRFSFHPAGHIIGSSQIRAEYQ
GEVWVFSGDYKTEDDGLATPYEPVRCHSFITECTFGLPAFKWRPQAEVLGDINAWWAR
NREGGKTSVLLAYSLGKAQRLLAGLDPDIGRIYTHGAIENMTEVLRPLAGFPETTRVT
GETTREELRGNLVLAPPSAHGSTWMRRMVPYEVAAASGWMAFRGARRRRAVDQGFVLS
DHCDWQGLLDSIRATGAERVICTHGYAHIFSRFLAENGYDARTEETQYEGETPENDTQ
VVT"
misc_feature 395894..396862
/locus_tag="RB2501_05095"
/note="putative exonuclease, DNA ligase-associated;
Region: Xnuc_lig_assoc; TIGR04122"
/db_xref="CDD:200373"
misc_feature 395954..396259
/locus_tag="RB2501_05095"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; smart00849"
/db_xref="CDD:197917"
gene 396892..398499
/locus_tag="RB2501_05100"
/db_xref="GeneID:8454716"
CDS 396892..398499
/locus_tag="RB2501_05100"
/codon_start=1
/transl_table=11
/product="DNA ligase"
/protein_id="YP_003194027.1"
/db_xref="GI:260060947"
/db_xref="GeneID:8454716"
/translation="MRAFAELIRTLDATNKTNVKVDALSSYFDSAPGPDKVWTIAILS
HRRPPRPVNTRLLREWASELAGIPLWLFEESYHIVGDLAETIALVIPQSGNPDSGARS
LSDYLEDIVALRGREESGKKAYLQENWQKLGFYERFVLTKFMTGGFRIGISQKLMTRA
LSQATGIGEDLLAFRLMGNWDPANTSFQELVLQEQQAENQSRPYPFYLAYPVDETPED
LGDPSAWLMEHKWDGIRAQLIVRGGTHFLWSRGEELITGSYPELADLAEALPDGTVID
GEILPYPKGQVGSFNDLQKRLGRKKVTNALLQKIPVILRAYDLLEWKGKDIRDLPYTE
RRALLDPLIEPLQADPNLPADLSATLEIKDWDAARKERGRARELRSEGLMLKRRASAY
GVGRKKGDWWKWKVDPFTVDAVLTYAMRGHGRRSNLFTDYTFALWADTENGRELVTFA
KAYSGLTDAEFRQVDAWIKRNTLERFGPVRSVKPEHVFEIAFEGIARSGRHKSGFATR
FPRIVRWRKDKPISEANTLAELENMIP"
misc_feature 396892..398496
/locus_tag="RB2501_05100"
/note="ATP-dependent DNA ligase; Validated; Region:
PRK09247"
/db_xref="CDD:181725"
misc_feature 397492..398118
/locus_tag="RB2501_05100"
/note="Adenylation domain of putative bacterial
ATP-dependent DNA ligases; Region:
Adenylation_DNA_ligase_Bac1; cd07897"
/db_xref="CDD:185708"
misc_feature order(397573..397584,397588..397596,397636..397644,
397648..397650,397654..397656,397723..397725,
397747..397752,397759..397767,397840..397842,
398032..398034,398041..398043,398047..398049,
398092..398094,398098..398100,398104..398106)
/locus_tag="RB2501_05100"
/note="active site"
/db_xref="CDD:185708"
misc_feature order(397579..397581,397588..397596,397636..397644,
397648..397650,397654..397656,397747..397752,
397759..397767,398032..398034,398098..398100,
398104..398106)
/locus_tag="RB2501_05100"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:185708"
misc_feature 398119..398487
/locus_tag="RB2501_05100"
/note="The Oligonucleotide/oligosaccharide binding
(OB)-fold domain of archaeal and bacterial ATP-dependent
DNA ligases is a DNA-binding module that is part of the
catalytic core unit; Region: OBF_DNA_ligase_Arch_LigB;
cd07972"
/db_xref="CDD:153441"
misc_feature order(398152..398166,398179..398181,398239..398244,
398248..398265,398377..398379,398383..398388,
398392..398394,398407..398418,398422..398424)
/locus_tag="RB2501_05100"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:153441"
gene 398503..401007
/locus_tag="RB2501_05105"
/db_xref="GeneID:8454717"
CDS 398503..401007
/locus_tag="RB2501_05105"
/codon_start=1
/transl_table=11
/product="helicase"
/protein_id="YP_003194028.1"
/db_xref="GI:260060948"
/db_xref="GeneID:8454717"
/translation="MAGPKHPTGQPPDTDALMAIASDWFKRQGWDPFPFQHKTWAAFM
EGRHGLLNAPTGSGKTYALWFPILLEYMRQHPNFRDGHKKGLKAIWITPLRALSREIH
QSAERITRDLDIPFEVGIRTGDTSSAERARQRKILPDLLITTPESLQLLLATKGYKKL
FADCYAIVVDEWHELLGSKRGVQMELALSRLKTICPALRIWGISATIGNLEQARQVLL
GPESGALENSVLIRAQIDKKITVRSIIPDTMETFPWRGHLGLHLLEHVIPIIRNSKTT
LLFTNTRGQCEIWFRALLEKHPELAGDIAMHHGSIDKATRNWVEQAIRNESLRAVVCT
SSLDLGVDFAPVETVVQIGGPKGVARFLQRAGRSGHRPGRESVIYFLPTHAMELIEAS
ALQQAVRKQAVEDRIPYLASYDVLVQYLTTLAVSDGFLPEEIYREVTGTFCYQAMSRE
DWEWLLNFLVMGSQSLASYDEYKKVEVLPDGLFKVTNRGVAMRHRFQIGTIVGDAHMT
VKYQKGGYIGTIEEWFISKLNPGDVFTFAGRNLEFIRIRDMVAQVRNSSRKTSKVPSW
MGGRLTLSSEMSELLREELYSHRRPAGEQSREIRSLDALFKRQQLESIVPGPDQFLIE
TFQSREGYHHLFYPFEGRFVHEAMASLLSYRISLLSPITFSLAYNDYGFELLSDRELN
IGVILDNDLFSPEYLLDDLQKSLNATEMARRKFRDIAVISGLVFTGYPKKGIKMKHLQ
SNSQLLFEVFRDYEPDHLLFRQAFRETFEHQLEEGRLRKALERISRQEILWKACEKYT
PFSFPIITDRLREKLSSEKLADRIRRMTRILTRGGR"
misc_feature 398557..400995
/locus_tag="RB2501_05105"
/note="DEXH box helicase, DNA ligase-associated; Region:
DEXH_lig_assoc; TIGR04121"
/db_xref="CDD:200372"
misc_feature 398641..399123
/locus_tag="RB2501_05105"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 398668..398682
/locus_tag="RB2501_05105"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 399010..399021
/locus_tag="RB2501_05105"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature 399286..399645
/locus_tag="RB2501_05105"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(399343..399354,399424..399429,399502..399510)
/locus_tag="RB2501_05105"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(399526..399528,399589..399591,399601..399603,
399613..399615)
/locus_tag="RB2501_05105"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
misc_feature 400342..400908
/locus_tag="RB2501_05105"
/note="DEAD/H associated; Region: DEAD_assoc; pfam08494"
/db_xref="CDD:203959"
gene 401028..401702
/locus_tag="RB2501_05110"
/db_xref="GeneID:8454718"
CDS 401028..401702
/locus_tag="RB2501_05110"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194029.1"
/db_xref="GI:260060949"
/db_xref="GeneID:8454718"
/translation="MTHSLELAGESVVFHPWGGLFWPAASTLLLSDLHLGKVMHFRKH
GAAVPRAAIRRNFDRLEAIRRHFEPRTLCFLGDLFHSHINREWQLFSDWAGACTSRMQ
LVVGNHDVISPLRYEALGIELYDSLEAGPFTLTHHPEAAAGRFNIAGHIHPAVRLGGA
GRQTLRLPCFHLKTNQLILPAFGAFTGTHALDPEPGDRFFALTGDAVVPLEAAISGTP
TKSSKS"
misc_feature 401109..401600
/locus_tag="RB2501_05110"
/note="Pyrococcus furiosus PF1019 and related proteins,
metallophosphatase domain; Region: MPP_PF1019; cd07391"
/db_xref="CDD:163634"
misc_feature order(401121..401123,401127..401129,401256..401258,
401346..401351,401433..401435,401475..401477,
401481..401483)
/locus_tag="RB2501_05110"
/note="putative active site [active]"
/db_xref="CDD:163634"
misc_feature order(401121..401123,401127..401129,401256..401258,
401346..401348,401433..401435,401475..401477,
401481..401483)
/locus_tag="RB2501_05110"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:163634"
gene 401699..402514
/locus_tag="RB2501_05115"
/db_xref="GeneID:8454719"
CDS 401699..402514
/locus_tag="RB2501_05115"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194030.1"
/db_xref="GI:260060950"
/db_xref="GeneID:8454719"
/translation="MNKTWSYLNLLSAMLVLAVNGISQSGMWPYPAVGEISRKYDTLF
TPAGYAFAIWGLIFIGLLAFAIYGIYRSSRYDRDNEFIARSAPWFIGANLLNAAWVVV
FTREWIGMSLLVIVGLLACLAAIIRRLNMERWDAPIGTIAFVWWPICFYSGWVSVAVI
ANAALYLEYLGWDGWGIGPVQWALALVLVAFALNVFMVLSRNMREFALVGIWALAAIA
FRHQESSGPLFYVPLAGAALLLLLVGWHGYRNRRTNPMRKFQERFTHGDPEKS"
gene 402576..405941
/locus_tag="RB2501_05120"
/db_xref="GeneID:8454720"
CDS 402576..405941
/locus_tag="RB2501_05120"
/codon_start=1
/transl_table=11
/product="transcription-repair coupling factor"
/protein_id="YP_003194031.1"
/db_xref="GI:260060951"
/db_xref="GeneID:8454720"
/translation="MNLETIREKFQQAPFFRDLQDAIAQPAATVSLDGLTGSSLSFVV
AETFKAQVCPMLVLLGDKEEAAYVLNDLEELLGRDNVLFYPGSYRRPYEIEETDNANV
LLRAEVLSRISSRKKPALIVSYPDALFEKVVTRKELSRNTLKVRVGDNLSLDFLNETL
FEYHFKRVDFVTEPGEFSVRGGIVDVFSFSHDEPYRLEFFGDEIDSIRSFDVETQLST
DKHKKITLVPNVADKILHEARESFLKYISDRTLLFIKQPELCFAQLDKLFKKAGEAFT
KLEGELAHAEPGALFLDGRSFREELGGFRTVALDGKSGETGTAGTALRVRVMPQPAFN
KQFELLRDTLAENAEKGMQNFLFCSSQQQANRFRDIFEEIGRDVPYSTIVRPLYRGFQ
SEELGLSCYTDHQLFERYHRFHLRNGYAKKQAITLKELNKLEIGDYVTHIDHGIGKFG
GLQKIDVEGRQQEAIKLIYGDRDILYVSIHSLHKIAKYNGKDGTVPKIYKLGSAAWKK
LKAKTKSRVKKIAFDLIQVYAKRRMKKGFSHAPDSYLQHELEASFVYEDTPDQSTATE
AVKADMESERPMDRLICGDVGFGKTEVAIRAAFKAVDNGKQVAVLVPTTILAFQHFRT
FGERLAEMPVTVDYLNRFRSAKERRTLLENLKSGKLDIVIGTHQLVGKQVEFKDLGLL
IVDEEQKFGVSVKDKLKSLKEHIDVLTLTATPIPRTLQFSLMAARDLSVINTPPPNRY
PIESRVVRFGEEVIRDAIRYEIQRGGQVFFVHNRIENIAEVAGLIQRLVPDARVGIGH
GQMEGKKLEKLMLDFMNGEFDVLVSTTIIESGLDVTNANTILINNANNFGLSDLHQMR
GRVGRSNKKAFCYFITPPYHVMTAEARKRMEALEQYTELGSGFNIAMKDLEIRGAGDL
LGGEQSGFINEIGFETYQKILAEAIDELKDNEFKDLYRETEGPRQQYVRDCQIDTDFE
LLFPDDYINSVSERLSLYTELNDTDNEEDLAAFRRKLEDRFGPLPEPASDLLESVRLK
WMATALGLEKIVMKKGKLIGYFIADQQSEFYQSAVFKRMLQYVQSHPGSGRLKEKQTR
NGLRLLLVFERVTSIGKALGALEPIAGSRVPQA"
misc_feature 402669..405917
/locus_tag="RB2501_05120"
/note="Transcription-repair coupling factor (superfamily
II helicase) [DNA replication, recombination, and repair /
Transcription]; Region: Mfd; COG1197"
/db_xref="CDD:31390"
misc_feature 403872..404162
/locus_tag="RB2501_05120"
/note="CarD-like/TRCF domain; Region: CarD_CdnL_TRCF;
pfam02559"
/db_xref="CDD:202283"
misc_feature 404307..404717
/locus_tag="RB2501_05120"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 404334..404348
/locus_tag="RB2501_05120"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 404628..404633
/locus_tag="RB2501_05120"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature 404826..405188
/locus_tag="RB2501_05120"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(404892..404903,404967..404972,405045..405053)
/locus_tag="RB2501_05120"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(405069..405071,405135..405137,405147..405149,
405156..405158)
/locus_tag="RB2501_05120"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
misc_feature 405477..405773
/locus_tag="RB2501_05120"
/note="TRCF domain; Region: TRCF; pfam03461"
/db_xref="CDD:202647"
gene 406046..407965
/locus_tag="RB2501_05125"
/db_xref="GeneID:8454721"
CDS 406046..407965
/locus_tag="RB2501_05125"
/codon_start=1
/transl_table=11
/product="alpha-amino acid ester hydrolase"
/protein_id="YP_003194032.1"
/db_xref="GI:260060952"
/db_xref="GeneID:8454721"
/translation="MKRLFLLLVLCLLALPAHSSEPIDSVYLRQHYDLAEYHIPMRDG
VELFTVVYTPKDQSRTYPILLNRTCYNASNYSNYQVNRYPSDYLVRDGYILAYQDVRG
RYMSDGTFDNMTPNIPGNDPDDPTAIDESSDTYDTIEWLINNIGNNNGRVGMYGVSYP
GFYTAAALPDAHPALKASSPQAPISDFWFDDFHHQGAYLQSYTAAFAVFGYQKEERTR
EPWYRDKIMRFYGEPASDGYDFYLRKGPLKNITEQFHHDNFFWEQIVEHPNYDDFWQK
RNILPHLRGIDHAVMTVGGWFDAEDLYGPLNIYKTIEAHNPQAKNTLVMGPWDHGGWT
RERGQTTHNHIYFGDSISTHYQKEIERQFFNYHLKDEGTLTLPEAYMFDTGTKQWRSF
DQWPPKDVAPLSLYFGENGTLSLDSPTDPDAVFSYTSDPDKPVPYTSQTEGLTFTPRR
FMSDDQRFASRRPDVLTFETEPLEDPRTIAGEILAKLQVSMTGSDADFVVKLIDVYPQ
DHENYEHNPGNIVMGGYQQLVRSEVFRGRFRNSFEHPEPFVPGEVSEVNFRLQDVLHT
FKEGHRIMIQIHSTWFPYIDRNPQKYVDNIYKADEEDFIKSTISVHGSSVIEAGGKVG
EAGPVEVRFESFIRD"
misc_feature 406160..407881
/locus_tag="RB2501_05125"
/note="Predicted acyl esterases [General function
prediction only]; Region: COG2936"
/db_xref="CDD:32759"
misc_feature 407177..407815
/locus_tag="RB2501_05125"
/note="X-Pro dipeptidyl-peptidase C-terminal non-catalytic
domain; Region: PepX_C; smart00939"
/db_xref="CDD:198007"
gene complement(408063..408722)
/locus_tag="RB2501_05130"
/db_xref="GeneID:8454722"
CDS complement(408063..408722)
/locus_tag="RB2501_05130"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194033.1"
/db_xref="GI:260060953"
/db_xref="GeneID:8454722"
/translation="MKTISSVVEHYIKKKPFLQTALAQGIINLTSLSRQVRPEIEAQL
GKEVRNGAIVMALKRLSDDLEFRATHRIVKVLKNIGEITVRSSLTDFTFLISDTILRN
QGRLLEVVNKNKDVFYTSSRGVNELNIVVSNSLDDVVEDVFSAERQTQKAENLSSITV
KLPAENVSVPGIYYFIFQRLAWEGIVLYEVISTTNEFTILVDEDQVDNAFTVIKDLKS
L"
misc_feature complement(408078..408266)
/locus_tag="RB2501_05130"
/note="Family description; Region: ACT_7; pfam13840"
/db_xref="CDD:206011"
gene complement(408805..409191)
/locus_tag="RB2501_05135"
/db_xref="GeneID:8454723"
CDS complement(408805..409191)
/locus_tag="RB2501_05135"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194034.1"
/db_xref="GI:260060954"
/db_xref="GeneID:8454723"
/translation="MKPNQNMPEETTCDIGREGEDYAVRYLLASGYRILCRNYRYRRA
EIDVLAFREGVLVVIEVKTRTRAFYEALSRSIPRSKIARLVRAADHYVRSNGLRAEVR
FDIIQVIRLREGYRLVHLEDAFYFFQ"
misc_feature complement(408811..409152)
/locus_tag="RB2501_05135"
/note="Restriction endonuclease; Region: Mrr_cat; cl00516"
/db_xref="CDD:207086"
gene 409391..410899
/locus_tag="RB2501_05140"
/db_xref="GeneID:8454724"
CDS 409391..410899
/locus_tag="RB2501_05140"
/codon_start=1
/transl_table=11
/product="signal peptide protein"
/protein_id="YP_003194035.1"
/db_xref="GI:260060955"
/db_xref="GeneID:8454724"
/translation="MEYFVNCNTAPLTPYAPPLDKTRVEHLFRRAGFSASVQTVDQSV
GQTAGTLVDSLVNDALALPPLPAPAWQDWNRANYPADDDAAGPIIRSQRDSWRLDYTQ
ALLDNNLRDRMSFFWSNHFVTELEIYESPSYLYYYTDCLQRNALGNFKTFVSEIGLTY
AMLYYLDGVYNNGDNPNENYARELYELFTLGEGNGYTEQDIIETARALSGYTERGEER
WDPVIFDITTFDPGVKTILGQSGTWGYDDVIDILFEQRPNEIATFICRKIYEFLVHPD
SNDATGNAEAIISGMATTFISNNFELAPVVSQLLKSQHFFDDNAIGVIIKSPFDYYLN
FINETGFGYDDTNLSFALESSRLIGQELFEPVDVAGWQRDRQWINTNFIIGRWLTIEV
MIQGFFQANQEQFRTLAMDAVGPADSNTSNPETVVRALVDKFLPKGLLTPQDFENAMD
VFKIDDVPENYYGSDNIPGGLGLWMLAVSPEVPQQVFLLLMYLSRQPEFQLK"
misc_feature 409466..410719
/locus_tag="RB2501_05140"
/note="Protein of unknown function (DUF1800); Region:
DUF1800; pfam08811"
/db_xref="CDD:192162"
gene 411026..412606
/locus_tag="RB2501_05145"
/db_xref="GeneID:8454725"
CDS 411026..412606
/locus_tag="RB2501_05145"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194036.1"
/db_xref="GI:260060956"
/db_xref="GeneID:8454725"
/translation="MMLGSNMLSASAPSPLTAAIANAPGDGILILIRLSGGNDGLSTV
IPIEQYDTYANARPNIYIPESKVLKLTDEFGVPSYMQALEEMWGEGSFKAVHGVGYEN
QSLSHFTGSDIYANTDLTTTGFSGLDTGWMGRYFENIYPDYLINPPAAPAAIQIGQYG
NLVFQGEETNYAFVASNINQLEEIAETGVQYSLDAALFDNCMYGDQLRFLRGVANTTY
EYSGLIHEAYMRGQNQVEYQDNGFARQLALLARLIKGNLGTRVYMISMGGFDTHGNQP
LIHERLMTNLSVAVKDFYEDLTFTEQDDKVLSMTFSEFGRRIYENGSNGTDHGKAAPT
LFFGAGLNGSAFVGDHPSLDDPNSRGNLEYTMDFRDLYATVLAEWLCVDIPLVEQHLL
GHAYNPVNLGFNCSGVDFDDIAYSDQPPTPPTPGDGTPGDEPTPEEIEAIVHKPYYPT
ESNPHIHVEMPFSAHIDISLYNILGQKIATLFNEMVFEGSLEINVRDRVPRHLATGKY
IYRIGVQDRHLAKSIMVA"
misc_feature 411110..412153
/locus_tag="RB2501_05145"
/note="Protein of unknown function (DUF1501); Region:
DUF1501; pfam07394"
/db_xref="CDD:116016"
gene 412754..414829
/gene="metG"
/locus_tag="RB2501_05150"
/db_xref="GeneID:8454726"
CDS 412754..414829
/gene="metG"
/locus_tag="RB2501_05150"
/note="methionine--tRNA ligase; MetRS; adds methionine to
tRNA(Met) with cleavage of ATP to AMP and diphosphate;
some MetRS enzymes form dimers depending on a C-terminal
domain that is also found in other proteins such as
Trbp111 in Aquifex aeolicus and the cold-shock protein
CsaA from Bacillus subtilis while others do not; four
subfamilies exist based on sequence motifs and zinc
content"
/codon_start=1
/transl_table=11
/product="methionyl-tRNA synthetase"
/protein_id="YP_003194037.1"
/db_xref="GI:260060957"
/db_xref="GeneID:8454726"
/translation="MSDAKGSFERTTITAALPYTNGPIHIGHLAGVYVPADIYSRYLR
LRGEEVLFVCGSDEHGVAIPMKAGREGISPKELIDKYDALIRESFEAFGIAFDNYSRT
SAPIHRETASAFFTKLHDQGDFEEQVTDQLFDPEAGQFLADRFVVGTCPKCGHTEAYG
DQCENCGSSLNATDLIDPRSAISGAQPVLKQTRHWFLPLDRYEGFLRTWILDGHKNDW
KPNVYGQCKSWIDEGLKPRAVTRDLEWGIPVPLEGAEGKVLYVWFDAPIGYISSTREW
ARREGADWEIWWKDPGTRLLHFIGKDNIVFHCIIFPSMLKAHGDFILPENVPANEFLN
LEGQKLSTSKNWAVWLHEYLEEFPDMQDVLRYALTANAPETKDNDFTWKDFQARNNNE
LVAIFGNFINRVAVLTDKYKGGQVPALQNLSENDRNTLHAMRAYPARIADCLDRFRFR
EGSQELMNLARLGNKYLADEEPWKVIKEDPDRVGTILGVGLQVAAALAVLCEPFLPFT
AGRLREILNLGALDSPLEWEAVSREAVLLPAGHAIGETRLLFRKIEDAEIEKQLQKLH
ETKKQNEMDNSSVTPQKDTIQYDDFTKLDLRVGTILEAEKMPKADKLIVMKVDTGIDT
RTIVSGIAKQFAPEDLVGKQVTVLVNLAPRPLRGVESQGMILLAEDAEGNLVFLTPEQ
ALANGSVIS"
misc_feature 412775..414823
/gene="metG"
/locus_tag="RB2501_05150"
/note="methionyl-tRNA synthetase; Reviewed; Region: metG;
PRK00133"
/db_xref="CDD:178889"
misc_feature 412790..413893
/gene="metG"
/locus_tag="RB2501_05150"
/note="catalytic core domain of methioninyl-tRNA
synthetases; Region: MetRS_core; cd00814"
/db_xref="CDD:173907"
misc_feature order(412799..412804,412808..412810,412922..412924,
413537..413539,413546..413551,413558..413560,
413660..413662,413672..413674)
/gene="metG"
/locus_tag="RB2501_05150"
/note="active site"
/db_xref="CDD:173907"
misc_feature 412826..412837
/gene="metG"
/locus_tag="RB2501_05150"
/note="HIGH motif; other site"
/db_xref="CDD:173907"
misc_feature 413768..413782
/gene="metG"
/locus_tag="RB2501_05150"
/note="KMSKS motif; other site"
/db_xref="CDD:173907"
misc_feature 413918..414301
/gene="metG"
/locus_tag="RB2501_05150"
/note="Anticodon-binding domain of methionyl tRNA
synthetases; Region: Anticodon_Ia_Met; cd07957"
/db_xref="CDD:153411"
misc_feature order(413921..413923,413942..413947,413954..413959,
413966..413971,413978..413983,413990..413995,
414143..414148,414152..414157,414170..414172)
/gene="metG"
/locus_tag="RB2501_05150"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153411"
misc_feature order(413942..413944,413954..413959,413966..413971,
413978..413983,413990..413995,414152..414154,
414170..414172)
/gene="metG"
/locus_tag="RB2501_05150"
/note="anticodon binding site; other site"
/db_xref="CDD:153411"
misc_feature 414509..414826
/gene="metG"
/locus_tag="RB2501_05150"
/note="tRNA-binding-domain-containing Escherichia coli
methionyl-tRNA synthetase (EcMetRS)-like proteins. This
family includes EcMetRS and Aquifex aeolicus Trbp111
(AaTrbp111). This domain has general tRNA binding
properties. MetRS aminoacylates methionine...; Region:
tRNA_bind_EcMetRS_like; cd02800"
/db_xref="CDD:48402"
misc_feature order(414512..414514,414653..414655,414701..414709,
414716..414718,414752..414763,414782..414784,
414788..414790,414794..414796,414803..414805,
414815..414826)
/gene="metG"
/locus_tag="RB2501_05150"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48402"
misc_feature order(414587..414589,414623..414625,414701..414703,
414713..414715,414734..414736,414743..414745)
/gene="metG"
/locus_tag="RB2501_05150"
/note="putative tRNA-binding site [nucleotide binding];
other site"
/db_xref="CDD:48402"
gene 414834..415736
/locus_tag="RB2501_05155"
/db_xref="GeneID:8454727"
CDS 414834..415736
/locus_tag="RB2501_05155"
/codon_start=1
/transl_table=11
/product="Histone deacetylase superfamily protein"
/protein_id="YP_003194038.1"
/db_xref="GI:260060958"
/db_xref="GeneID:8454727"
/translation="MLKIAFHPIYAHPLPEGHRFPMQKYELLPQQLLHEGTAEHENFF
TPGLPEDSEILRAHDAAYFEDLQTGRIPPREMRKVGFPWSEALVLRERTIAQGTIRCC
HYALENGVSMNIAGGTHHAYRDRGEAFCMLNDQAIGACHLLANNLAERILMLDLDVHQ
GNGTAAIFREEPRVFTYSMHGQSNYPFRKEVSDWDVPLAKQTGDTEYLTTLETHLENL
YAQVRPDFVFYLCGVDVLATDKLGTLALTPEGCRQRDAMVFRWCRSHGLPVQCSMGGG
YSPQIRTIVEAHAQTFRTAQSLYF"
misc_feature 414834..415673
/locus_tag="RB2501_05155"
/note="Deacetylases, including yeast histone deacetylase
and acetoin utilization protein [Chromatin structure and
dynamics / Secondary metabolites biosynthesis, transport,
and catabolism]; Region: AcuC; COG0123"
/db_xref="CDD:30472"
misc_feature 414885..415709
/locus_tag="RB2501_05155"
/note="Histone deacetylase class IV also known as histone
deacetylase 11; Region: HDAC_classIV; cd09993"
/db_xref="CDD:212519"
misc_feature order(414903..414905,415182..415193,415215..415223,
415302..415304,415308..415310,415521..415523,
415533..415535,415653..415658,415662..415664)
/locus_tag="RB2501_05155"
/note="putative active site [active]"
/db_xref="CDD:212519"
misc_feature order(415302..415304,415308..415310,415533..415535)
/locus_tag="RB2501_05155"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:212519"
gene 415736..416575
/locus_tag="RB2501_05160"
/db_xref="GeneID:8454728"
CDS 415736..416575
/locus_tag="RB2501_05160"
/codon_start=1
/transl_table=11
/product="PAP2 family protein"
/protein_id="YP_003194039.1"
/db_xref="GI:260060959"
/db_xref="GeneID:8454728"
/translation="MVRNIFIAFLCCLAVPVSAQQSGRSIDAGTWQQFTYDLGSIFGG
VGYSYSRPLYWGGQQWGNFALLVGATGGAYLADVPVSDYFIGIREDVPKFIRDYGWEI
GSPANNYMLTGGVYLTGLFLKDPKLRRTGVLLVASATSAGFLQQVLKSAIGRARPSSG
LGKATFSPLWPGDNDFHSFPSGHSILAFTNAYAIAKQFRNPWLRAGIYTVGLVPGISR
LWEGKHWLSDVVFSIGISIFTVEAIDRYLDRRYDEKYGQDPDQAQWNLTFGPGTIGMQ
YRF"
misc_feature 416114..416461
/locus_tag="RB2501_05160"
/note="PAP2_like_5 proteins. PAP2 is a super-family of
phosphatases and haloperoxidases. This subgroup, which is
specific to bacteria, lacks functional characterization
and may act as a membrane-associated lipid phosphatase;
Region: PAP2_like_5; cd03394"
/db_xref="CDD:48098"
misc_feature order(416180..416182,416201..416203,416276..416284,
416387..416389,416405..416407,416417..416419)
/locus_tag="RB2501_05160"
/note="active site"
/db_xref="CDD:48098"
misc_feature <416228..416485
/locus_tag="RB2501_05160"
/note="Membrane-associated phospholipid phosphatase [Lipid
metabolism]; Region: PgpB; COG0671"
/db_xref="CDD:31015"
gene 417056..417574
/locus_tag="RB2501_05165"
/db_xref="GeneID:8454729"
CDS 417056..417574
/locus_tag="RB2501_05165"
/codon_start=1
/transl_table=11
/product="ferritin 1"
/protein_id="YP_003194040.1"
/db_xref="GI:260060960"
/db_xref="GeneID:8454729"
/translation="MLKKNVETALNGQIRVEAQSSQIYLSMASWAEVKGLEGISQFLY
KHSDEERMHMLKLVRYVNERGGHAVVSELDAPETDFGSFQNLFKMLYEHEIYVSECIN
DLVHVTLEEKDYATHNFLQWYVAEQIEEEALARTILDKINLIGNDKGGLYLFDRDIKQ
ISADSAASGETA"
misc_feature 417062..417529
/locus_tag="RB2501_05165"
/note="nonheme-containing ferritins; Region:
Nonheme_Ferritin; cd01055"
/db_xref="CDD:153113"
misc_feature 417074..417487
/locus_tag="RB2501_05165"
/note="Ferritin-like domain; Region: Ferritin; pfam00210"
/db_xref="CDD:201085"
misc_feature order(417104..417106,417200..417205,417212..417214,
417335..417337,417431..417433,417440..417445)
/locus_tag="RB2501_05165"
/note="ferroxidase diiron center [ion binding]; other
site"
/db_xref="CDD:153113"
gene 417665..417886
/locus_tag="RB2501_05170"
/db_xref="GeneID:8454730"
CDS 417665..417886
/locus_tag="RB2501_05170"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194041.1"
/db_xref="GI:260060961"
/db_xref="GeneID:8454730"
/translation="MGKKKKKKKCAAELLLLREQRLQEILRTGCAPEGCKSKCCKKFK
KGEHKRCRKCPCKDLLKLARSNPGFQQVA"
gene complement(417948..418403)
/locus_tag="RB2501_05175"
/db_xref="GeneID:8454731"
CDS complement(417948..418403)
/locus_tag="RB2501_05175"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194042.1"
/db_xref="GI:260060962"
/db_xref="GeneID:8454731"
/translation="MFAALISCSGALAQPVAKHTGFAQSGTEQIRETTPGLPNPAFFV
RQAQTDAAYEQQLQLEGGKEEMDFWTDQRAFERELYRQNLAAYKVYIQAKRDVYSSHQ
QSCGPSCLHGDYYYLQASFYLQMGSDSNGDSWMFGSLDSGGGLIAAGPE"
gene complement(418545..418877)
/locus_tag="RB2501_05180"
/db_xref="GeneID:8454732"
CDS complement(418545..418877)
/locus_tag="RB2501_05180"
/codon_start=1
/transl_table=11
/product="Single-strand binding protein"
/protein_id="YP_003194043.1"
/db_xref="GI:260060963"
/db_xref="GeneID:8454732"
/translation="MNALRNKVQLIGNLGQDPEVTVLDGGGKMARFSLATNEIYKNAQ
GEKVTDTQWHQVVAWGKIADIVESYLNKGKEVAVEGKLIHRHYDTEEGQRKYVTEVRC
SELLLLGK"
misc_feature complement(<418575..418871)
/locus_tag="RB2501_05180"
/note="Single-stranded DNA-binding protein [DNA
replication, recombination, and repair]; Region: Ssb;
COG0629"
/db_xref="CDD:30974"
misc_feature complement(418554..418856)
/locus_tag="RB2501_05180"
/note="SSB_OBF: A subfamily of OB folds similar to the OB
fold of ssDNA-binding protein (SSB). SSBs bind with high
affinity to ssDNA. They bind to and protect ssDNA
intermediates during DNA metabolic pathways. All bacterial
and eukaryotic SSBs studied to date...; Region: SSB_OBF;
cd04496"
/db_xref="CDD:72968"
misc_feature complement(order(418584..418586,418593..418595,
418626..418628,418653..418655,418716..418718,
418722..418724,418764..418772,418845..418856))
/locus_tag="RB2501_05180"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:72968"
misc_feature complement(order(418575..418577,418581..418583,
418620..418625,418629..418631,418635..418637,
418659..418664,418701..418703,418707..418709,
418713..418715,418719..418721,418725..418730,
418761..418766,418785..418787,418815..418817,
418833..418841))
/locus_tag="RB2501_05180"
/note="ssDNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:72968"
misc_feature complement(order(418560..418562,418641..418643,
418647..418649,418653..418655))
/locus_tag="RB2501_05180"
/note="tetramer (dimer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:72968"
gene 419121..420689
/locus_tag="RB2501_05185"
/db_xref="GeneID:8454733"
CDS 419121..420689
/locus_tag="RB2501_05185"
/codon_start=1
/transl_table=11
/product="peptidase, M28 family protein"
/protein_id="YP_003194044.1"
/db_xref="GI:260060964"
/db_xref="GeneID:8454733"
/translation="MRNHPILLLLCLFVLASGTAQETAAEQQTAALVAQIEKEAVENS
QLETLAHQLMDVIGPRLVGTPQMNKAHEWAVATFKEWGIPAENEQWGTWRGWERGICH
IDLLEPRVVSLHGRQLAWSPSTPAKGITADLITLPEVADSLAFARWLPEVKGKWVLVS
MPEPTGRPDYNWEEWATEASFEKMKSDREAQTKAWRQNLRNTGYSSRSINQALEAAGA
AGIVQSRWSGAFGANKIFSANTEEIPVIDLSLEDYGMLYRMAENGDGPRLRVVAESRE
LGRVPTFNTVATIRGTELPDEYIVLSAHFDSWDGGTGATDNGTGTLTMMEAARILKKV
YPNPKRTIIVGLWGSEEQGLNGSRAYVEDHPEVVSGLQALFNQDNGTGRVVNISGQGF
LHAYEYLGRWLEAVPDHVTEHIETQFPGNPGRGGSDYASFVAMGAPAFSLSSLSWSYW
NYTWHTNLDTYDKIVFDDVRNNAILTAVLAYMASEDPERTSREKAVLSVNPRTGEQRE
WPEPRSPNREGGQD"
misc_feature 419247..>419411
/locus_tag="RB2501_05185"
/note="Zinc peptidases M18, M20, M28, and M42; Region:
Zinc_peptidase_like; cl14876"
/db_xref="CDD:213133"
misc_feature <419925..420578
/locus_tag="RB2501_05185"
/note="Predicted aminopeptidases [General function
prediction only]; Region: Iap; COG2234"
/db_xref="CDD:32415"
misc_feature <419964..420605
/locus_tag="RB2501_05185"
/note="Zinc peptidases M18, M20, M28, and M42; Region:
Zinc_peptidase_like; cl14876"
/db_xref="CDD:213133"
misc_feature order(420030..420032,420066..420068,420168..420173,
420252..420254,420483..420485)
/locus_tag="RB2501_05185"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193495"
gene 420771..422081
/locus_tag="RB2501_05190"
/db_xref="GeneID:8454734"
CDS 420771..422081
/locus_tag="RB2501_05190"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194045.1"
/db_xref="GI:260060965"
/db_xref="GeneID:8454734"
/translation="MKNTICLLLLLALAVGCRQDPQPVTQTEGTTENLVMADPTGQGM
SDERLDRIDSMLHHAIAGDQIPGAVALVARNGKIVLHKAYGLANVRDSLPFRPDGIFR
IASQTKAITATAVMMLWEEGRFRLDDPIADYIPEFADTGVLDTFREADSSFTTTPLET
PITIRHLLTHTSGIGYGMIDGDPRFRKAYAKAGIVDAFTARPVTLAENIPKLARMPLH
HEPGEGWTYSEGLDVLGYFVELVSGKPFDAFLKERIFDPLGMADTWFYLPEDRAERLV
PVQYWDPDDGDWRPFTTDVFDIDYPKQGARTYFAGGAGLSSTAIDYAAFLQMYLNGGE
YNGQRLLSRTTIETMMANQIGDLWSGGPKDYGLAFAIVNPDGVAQGGEGGIGTFDWGG
YFNTQYFADPGEQLIGILMKQTQGAGKDETGWKFRQMVFAAIDD"
misc_feature 420894..422018
/locus_tag="RB2501_05190"
/note="Beta-lactamase class C and other penicillin binding
proteins [Defense mechanisms]; Region: AmpC; COG1680"
/db_xref="CDD:31866"
misc_feature 420924..422069
/locus_tag="RB2501_05190"
/note="Beta-lactamase; Region: Beta-lactamase; pfam00144"
/db_xref="CDD:201034"
gene 422177..425317
/locus_tag="RB2501_05195"
/db_xref="GeneID:8454735"
CDS 422177..425317
/locus_tag="RB2501_05195"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194046.1"
/db_xref="GI:260060966"
/db_xref="GeneID:8454735"
/translation="MKKHLILLLTFTLVAQASYSQRNRRQAPREILPDSLYSGLAWRN
IGPFRGGRSVAACGVADQPGTYYMGTTGGGIWKTGDNGITWKNISDGFLKTGTVGDIA
VAPSDPNVVLAGMGEHAARGVMTSMGDGVYLSRDAGTTWEHIGLDKSRHISDVIIHPT
DPDTFYVAAQGAQYGPGGDRGVYRTADGGQTWERVLHVNDWTGAASLSMDPKNPRILY
AAMWEHRRYPWTMESGGKGSGIYKSSDGGTTWEKLGKGLPETFGKAGISASGARSGLV
YAVLEAEGEQAGVYRSDDGGGKWRQVNKDRINVARSWYYMEIFADTQDPERVYVLNAP
MTRSIDGGKTFQPIPTPHGDNHDLWIHPEDNQVMINANDGGGNISLNGGASWSSQENQ
PTAQFYRVITDNQFPYLVYGGQQDNSAIAIASRTSDGGIDWKDWHSVAGCESAYLAFD
PDDPDVVYGGCYQGIIEKWFRDRRTAKEIQEYPELGLSKAPEDQKYRYNWNAPIVSDP
FDRNTIYHAGNVVFRSQDGGLSWEVISPDLTRDEADKQGPGGGPFTNEAAGGENYNTI
MYLTASPHEQGTLWAGSDDGLIHLTRNGGESWENVTPEGMGQGIVNSIEVSPHHPATA
YATLMRYKFMDLTPYVYKTTDYGASWSLVTDGLDDPNGFVRVVREDPIRPGLLYAGTE
TGLYISRDAGGYWQPFQLNLPVVPINDLTFRNNDLVAATAGRAFWILDDLSALQQDYD
RRQPISLIQPRETVLFSGGYQEKPTPGLGQNPKSGVILDYYLGREADSAEIVLEILEN
NRVIRSYTNQPPKDFKTWPGGPSKPETLTAHTGLNRFVWDFRREAIPAVDGVFVMGDY
SGSRVAPGNYTARIRMDSTEATQPIRIVPRPDIGATPADFREQQEALSQIEEALRDMH
RAVNQLRSVRSQLETYADLLSGDEKAEPLLKLGDSLLQRITDWEEELIQPRQKTFQDV
INYNNQLNAEFMYLKGYIDGAEPVLTQGARERLRDLMTAWRSLARERDAIVNEGMEGY
NRSYRELGLPALIMED"
misc_feature 423674..424267
/locus_tag="RB2501_05195"
/note="BNR repeat-like domain; Region: BNR_2; pfam13088"
/db_xref="CDD:205269"
gene complement(425567..425689)
/locus_tag="RB2501_05200"
/db_xref="GeneID:8454736"
CDS complement(425567..425689)
/locus_tag="RB2501_05200"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194047.1"
/db_xref="GI:260060967"
/db_xref="GeneID:8454736"
/translation="MYPAGIPPPNKAEIVYQMTWLTPGIPRDTGKQVWIKTPGE"
gene complement(425729..426247)
/locus_tag="RB2501_05205"
/db_xref="GeneID:8454737"
CDS complement(425729..426247)
/locus_tag="RB2501_05205"
/codon_start=1
/transl_table=11
/product="CBS domain-containing protein"
/protein_id="YP_003194048.1"
/db_xref="GI:260060968"
/db_xref="GeneID:8454737"
/translation="MKENTIFKNNLTKYNSMAIKSFQGRRAKDPSKKEYDAPILVSDY
MTRNLVTFRPDQSILEVMEAFTRHRISGGPVLDDNGFLVGIVSEADCMKQISESRYFN
QPILDKSVERFMTKEVETIPHDMSIFDAAGVFHKNNRRRLPVMKDGLLIGQISRKDIV
VAALKLNSQNWK"
misc_feature complement(425768..426127)
/locus_tag="RB2501_05205"
/note="FOG: CBS domain [General function prediction only];
Region: COG0517"
/db_xref="CDD:30863"
misc_feature complement(425762..426109)
/locus_tag="RB2501_05205"
/note="The CBS domain, named after human CBS, is a small
domain originally identified in cystathionine
beta-synthase and is subsequently found in a wide range of
different proteins. CBS domains usually occur in tandem
repeats. They associate to form a so-called...; Region:
CBS_pair_16; cd04629"
/db_xref="CDD:73127"
gene 426321..428606
/locus_tag="RB2501_05210"
/db_xref="GeneID:8454738"
CDS 426321..428606
/locus_tag="RB2501_05210"
/codon_start=1
/transl_table=11
/product="peptidase, M20/M25/M40 family protein"
/protein_id="YP_003194049.1"
/db_xref="GI:260060969"
/db_xref="GeneID:8454738"
/translation="MKPTATVLCLLLLLAATFWAFESATPRYHEDADVPAAEFSTDRA
MEHVVAIARKPHGVGFPGHDDVREYLVRTLRGMGLEPELQEGYTAGDWGNLSKAVNIL
ARIPGTGSGKALLLLSHYDSSPHSSFGASDAGSGVAVILEAVRAYRESGEQPANDIIL
LFSDAEELGLNGADLFVNQHPWAQDVGLVLNFEARGSGGPGYMLLETNGGNSGLVDAF
VAAGAEYPVANSLAYSIYKMLPNDTDLTVFREDGDIEGMNFAFIDDHFDYHTALDTPE
RLDLRTLAHQGSYLVPLLEHFSQASLDGLKSGEDSVYFNLPFFGLVTYPFRWIWPIFG
LAVLGFLLVCAIGLRNGQLHGRGILKGFAPLFACLILNGAAGYFAWPLLKTLYPGYGD
ILQGFPYNGYLYIAAWAALAAGICFLVYSRFRKLPPADTLVAPLLLWLVLCGVLNIYL
PGAAFFLIPGIALLMALLISCLKESPNPYVLCLLGIPALWIFAPFVKMFPVGLGMKML
IAASLMTTFLFLLLLGLLARLPNKARLGGLGLLLFAGFLAGAHFSSRYTPENPKPTSL
LYVGQTDTQQAFWATYEQVPSDWTQAYLGPEPERPETAGLHTLSSKYNSGFTFIREAS
RKPIPEPAVEILTDTLIGGRHHLVLEIIPQRDINRLEVFATGAELSAARVNGVELSED
YLDRRRGGKLVTHYVSDNAPTRLDLEFPAGEALELTLYEASNDLLDNPWFSIPPRPAE
TIPMPFILNDAVLLIKSLHFE"
misc_feature 426432..427292
/locus_tag="RB2501_05210"
/note="M28 Zn-peptidase Endoplasmic reticulum
metallopeptidase 1; Region: M28_Fxna_like; cd03875"
/db_xref="CDD:193497"
misc_feature <426591..427181
/locus_tag="RB2501_05210"
/note="Predicted aminopeptidases [General function
prediction only]; Region: Iap; COG2234"
/db_xref="CDD:32415"
misc_feature order(426675..426677,426714..426716,426816..426821,
426897..426899,427125..427127)
/locus_tag="RB2501_05210"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193497"
gene 428599..429453
/locus_tag="RB2501_05215"
/db_xref="GeneID:8454739"
CDS 428599..429453
/locus_tag="RB2501_05215"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194050.1"
/db_xref="GI:260060970"
/db_xref="GeneID:8454739"
/translation="MSDSPDSARHTLPDAPGTIGILGCGWLGFPLAGRLLESGYSVRG
TTTRAEKLDKLENAGIRAFQVVLTETGFTGDWREFLQGLDLLVCNIPPGIRANPQTDY
PAKIRHLVRALEDHGVPRLIYIGSTSVYGRSQGVVDEAAEPEPDSESGRQLLRAEEIL
RASPLAGSSLILRFGGLIGPNRHPVTMLSGRTGLSGGNDPVNLIERTDCLNLIERAIR
DPSQVGIANGVAPGHPAKADYYQGEALERGIPPPQYVDSTGQKPGKRIKSRHFLVNTY
EFLTTPEA"
misc_feature 428653..429405
/locus_tag="RB2501_05215"
/note="atypical (a) SDRs, subgroup 4; Region: SDR_a4;
cd05266"
/db_xref="CDD:187576"
misc_feature 428653..429243
/locus_tag="RB2501_05215"
/note="NADH(P)-binding; Region: NAD_binding_10; pfam13460"
/db_xref="CDD:205638"
misc_feature order(428665..428667,428671..428679,428734..428742,
428863..428871,428968..428976,429043..429045,
429055..429057,429118..429129)
/locus_tag="RB2501_05215"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187576"
gene 429572..429946
/locus_tag="RB2501_05220"
/db_xref="GeneID:8454740"
CDS 429572..429946
/locus_tag="RB2501_05220"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194051.1"
/db_xref="GI:260060971"
/db_xref="GeneID:8454740"
/translation="METKHIEERIVSDLEELISESCGKNQNDERYRELHRDLLRNHYN
AADVDIDYHRKRIRMFVLADNASYRPGKVNLNLPVLHVNLLFKNLKAFLTGCLQTDRK
SLSFYAQLLRRFRAGKRQAVLY"
gene 430139..430846
/locus_tag="RB2501_05225"
/db_xref="GeneID:8454741"
CDS 430139..430846
/locus_tag="RB2501_05225"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194052.1"
/db_xref="GI:260060972"
/db_xref="GeneID:8454741"
/translation="MKKLVWLILLAAGFQLTAQTESALKKHYEDYYRQMRVQGDVRGV
INALTHLNLLDYSVERRDTLAYVYANNDQHLQALNLLGVDLSPEDSDIALQVKALSLK
SLNQPKRSLEHFEALFDRNPNPYLSYEIADLKIQVGENAGALTAIEYGIEHATDEMKY
AFYERQQPYEVSLKSALIHLRGLAQYGMNRNNIDKAIASFDEALAMDPNFNLASLSKQ
ALESRKQQAQEGENPDN"
gene complement(430941..431417)
/locus_tag="RB2501_05230"
/db_xref="GeneID:8454742"
CDS complement(430941..431417)
/locus_tag="RB2501_05230"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194053.1"
/db_xref="GI:260060973"
/db_xref="GeneID:8454742"
/translation="MCCLPLMVAGQQAEKKHLDSLLTAWHQAASDADFDAYFGLMAPG
GVFIGTDASENWDREAFMEFSRPYFDQGKAWSFRAIERNIYLGPGGKTAWFDELLDTW
MQLCRGSGTLVKTPEGWKIAHYVLSMTIPNEEVEGAVALKRERDSLVRARLTGDGQ"
misc_feature complement(431025..431360)
/locus_tag="RB2501_05230"
/note="SnoaL-like domain; Region: SnoaL_3; pfam13474"
/db_xref="CDD:205652"
gene complement(431452..431946)
/locus_tag="RB2501_05235"
/db_xref="GeneID:8454743"
CDS complement(431452..431946)
/locus_tag="RB2501_05235"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194054.1"
/db_xref="GI:260060974"
/db_xref="GeneID:8454743"
/translation="MKKLCAFFLLLCVLSGCDQPAGPRIDSPPEGTLPDTLPLPEPVG
LQGPVRTAVADWEAFTALEERIASLYNVQGPEEMKLKLEELTADFQALEESEFPELFN
IPSVRSRERVVRTFLLKTQAALYYRRDYRPALRQFLEAYNAFRSQLNRVESSQLDPSL
FDED"
gene 432009..432959
/locus_tag="RB2501_05240"
/db_xref="GeneID:8454744"
CDS 432009..432959
/locus_tag="RB2501_05240"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="YP_003194055.1"
/db_xref="GI:260060975"
/db_xref="GeneID:8454744"
/translation="MAKTILILGACGQIGTELTLALRGIHGPEAVVASDIREGDSELM
GSGPFEILDATDADAMEEVVVHYEVDEIYLMAAMLSATAEKFPDRAWNLNMNTLFNVL
KLARENKISKIFWPSSIAVFGGTTPKEDTPQSTVMEPSTVYGISKQSGERWCAYYHRK
FGVDVRSLRYPGLISWKTQPGGGTTDYAVEIFHEALKNGTYTSFLDRDTRLPMMYMDD
AIRATIELMRADAEALSIRSSYNLQAMTFSPEELAEAIRREIPDFRIEYAPDFRQEIA
DSWPSRIDDSQAREDWGWQPEYDLQKTTATMLAELRAQAG"
misc_feature 432015..432950
/locus_tag="RB2501_05240"
/note="Nucleoside-diphosphate-sugar epimerases [Cell
envelope biogenesis, outer membrane / Carbohydrate
transport and metabolism]; Region: WcaG; COG0451"
/db_xref="CDD:30800"
misc_feature 432021..432941
/locus_tag="RB2501_05240"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(432033..432035,432039..432044,432048..432050,
432111..432119,432231..432239,432354..432362,
432435..432437,432447..432449,432516..432527)
/locus_tag="RB2501_05240"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(432288..432290,432360..432362,432435..432437,
432447..432449)
/locus_tag="RB2501_05240"
/note="active site"
/db_xref="CDD:187535"
gene complement(432947..434320)
/locus_tag="RB2501_05245"
/db_xref="GeneID:8454745"
CDS complement(432947..434320)
/locus_tag="RB2501_05245"
/codon_start=1
/transl_table=11
/product="ribosomal protein S6 modification protein"
/protein_id="YP_003194056.1"
/db_xref="GI:260060976"
/db_xref="GeneID:8454745"
/translation="MTQLPTLGSEEWCVFDDLGIPAIKARVDSGAKTSSMQATNIKVV
MKHGEEWVHFEVHPLQDTRSITIPCEAKLVDRRYVKSSSGITEERLVIRTPVRLGEDT
FEIEVTLASRDTMEYRMLLGREALSGRYLVNPAASFSQQEISDAELEGLYKPHRPSRS
GLKIALLASNPQLYSNKRIMEAAQGRGHEIVFLNVELAYMKLDARSPEIRYRGGNILN
EFDAIIPRIKPAVTFYGCALIRQFDNLGVYCLNSAEAITQSRDKLFASQLFSRHDIHI
PITGFAKSPNDTRDLIKMVNGAPLIIKLLESTQGKGVVLAETNKAAESVINAFKSVQT
NILVQEFIKEANGQDIRCFVINNKVVASMQRQAEKGEFRANIHQGGSASPVKITSEER
KLAIKAAKVLNLAVAGVDIIRSNKGPLLLEVNSSPGLEGIENATGKDIADSMIRAIEK
KLNYQPA"
misc_feature complement(433895..434302)
/locus_tag="RB2501_05245"
/note="Uncharacterized protein conserved in archaea
[Posttranslational modification, protein turnover,
chaperones]; Region: COG4067"
/db_xref="CDD:33825"
misc_feature complement(432965..433837)
/locus_tag="RB2501_05245"
/note="ribosomal protein S6 modification protein;
Provisional; Region: PRK10446"
/db_xref="CDD:182468"
misc_feature complement(432977..433546)
/locus_tag="RB2501_05245"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl03087"
/db_xref="CDD:207834"
gene complement(434401..434709)
/locus_tag="RB2501_05250"
/db_xref="GeneID:8454746"
CDS complement(434401..434709)
/locus_tag="RB2501_05250"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194057.1"
/db_xref="GI:260060977"
/db_xref="GeneID:8454746"
/translation="MDNLKRVIVDFKKLTPEVLKLLVEKYPDGYDDDNIITFRNAQGE
RVEAVEVTTDDTKYLVKISAKLEKTMANYEEEDYEDFDDDDPEAIPDVEIDSEDDPEM
"
gene complement(434712..435686)
/locus_tag="RB2501_05255"
/db_xref="GeneID:8454747"
CDS complement(434712..435686)
/locus_tag="RB2501_05255"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194058.1"
/db_xref="GI:260060978"
/db_xref="GeneID:8454747"
/translation="MDSNAPVTDFITRYFRHFNAAALVDAAKGYQDQLDQGAKMLVSL
AGAMSTAELGRIFAEMIRQDKVHIISCTGANLEEDIMNLVAHSHYRRVPEYRDLTPKD
EWALLEKGLNRVTDTCIPEEEAFRRLQEHIFKIWKDAEAAGERYFPHEFMYKLLLSGV
LEPHYEIDLKDSWMYAAAEKNLPLVCPGWEDSTMGNIFASYVVKGELKASTMKSGIEY
MTYLADWYTDNSDKGIGFFQIGGGIAGDFPICVVPMLYQDLERTETPFWSYFCQISDS
TTSYGSYSGAVPNEKITWGKLGIDTPKFIVESDATIVAPLIFAYLLNM"
misc_feature complement(434718..435686)
/locus_tag="RB2501_05255"
/note="Deoxyhypusine synthase; Region: DS; cl00826"
/db_xref="CDD:199348"
gene complement(435743..436615)
/locus_tag="RB2501_05260"
/db_xref="GeneID:8454748"
CDS complement(435743..436615)
/locus_tag="RB2501_05260"
/codon_start=1
/transl_table=11
/product="arginase"
/protein_id="YP_003194059.1"
/db_xref="GI:260060979"
/db_xref="GeneID:8454748"
/translation="MKQSKNYAGIPDEFSQMEKAAVVLIPVPYDGTSTWGKGADKGPD
AFLEASENMELYDIETGTEVYRQGIYLAPPVTGDHPEGVVNAVHDQVKDYIMRNKFVT
LFGGEHSLSIGSIRAFNECFDDLTVLQIDAHADLRKTYEGTAYNHACAVHEASQTTNL
VQVGIRSMDAIEKTYMDPEKVFFAHEMAADEFWMDKVIELLTDNVFITFDLDALDPSI
LPSTGTPEPGGLFWYETLEFLFRVFEEKNVVGFDIVELCPNPADRSSDFLAAKLYYKM
LSYKFREDAIEGDA"
misc_feature complement(435785..436552)
/locus_tag="RB2501_05260"
/note="Agmatinase and related proteins; Region:
Agmatinase-like_2; cd11593"
/db_xref="CDD:212539"
misc_feature complement(order(435851..435853,435980..435982,
435986..435988,436172..436177,436211..436219,
436223..436225,436292..436294))
/locus_tag="RB2501_05260"
/note="putative active site [active]"
/db_xref="CDD:212539"
misc_feature complement(order(435980..435982,435986..435988,
436211..436213,436217..436219,436223..436225,
436292..436294))
/locus_tag="RB2501_05260"
/note="Mn binding site [ion binding]; other site"
/db_xref="CDD:212539"
gene complement(436669..438132)
/locus_tag="RB2501_05265"
/db_xref="GeneID:8454749"
CDS complement(436669..438132)
/locus_tag="RB2501_05265"
/codon_start=1
/transl_table=11
/product="arginine decarboxylase"
/protein_id="YP_003194060.1"
/db_xref="GI:260060980"
/db_xref="GeneID:8454749"
/translation="MNITYRDLIDQTYYFPTEEFDLEGDRLRFHGVSLTDLIERYGSP
LKFTYLPKISQNINRAKDWFAEAMEKHDYPGKYYYCYCTKSSHFRYVLHEALKNDIHI
ETSSAFDIDIVENLKAQGLISDRTYVICNGFKREAYVDNIGRLINEGHRNCIPIIDNY
EELSLLDEVIDQPFKVGIRIASEEEPKFEFYTSRLGIGYKDIVPFYENQIRDNDKVEL
RMLHFFINTGIRDNAYYWNELNKCLKVYVRLKKLCPSLDSLNIGGGFPTKNSLSFQYD
YAYMVDEIVNQIKLTCEEGDVPPPNIFTEFGSFTVGESGGAVYKVLYQKQQNDREKWN
MIDSSFITTLPDSWAINKRFIMLSVNRWDDPYERVLLGGLTCDSDDYYNSQQDMNAIY
LPKFHSGKPLYIGFFNTGAYQETIGGFGGLHHCLIPQPKHLLIDREENGEVFISVFSE
QQTARDHMQILGYGPGPDGEPEAQTSLRTGKKRETAS"
misc_feature complement(436897..438078)
/locus_tag="RB2501_05265"
/note="Diaminopimelate decarboxylase [Amino acid transport
and metabolism]; Region: LysA; COG0019"
/db_xref="CDD:30369"
misc_feature complement(436828..438018)
/locus_tag="RB2501_05265"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme Arginine Decarboxylase; Region: PLPDE_III_ADC;
cd06830"
/db_xref="CDD:143503"
misc_feature complement(order(436855..436863,436882..436890,
436996..436998,437002..437010,437014..437016,
437113..437115,437122..437124,437128..437130,
437134..437136,437158..437169,437545..437556,
437638..437640,437650..437652,437662..437664,
437725..437727,437806..437811,437815..437820,
437881..437883,438004..438006))
/locus_tag="RB2501_05265"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143503"
misc_feature complement(order(436861..436863,436885..436887,
436897..436899,437002..437007,437209..437220,
437341..437346,437452..437454,437461..437463,
437596..437598,437740..437742,437824..437826,
437881..437883,437887..437889))
/locus_tag="RB2501_05265"
/note="active site"
/db_xref="CDD:143503"
misc_feature complement(order(436897..436899,437005..437007,
437209..437220,437341..437346,437452..437454,
437461..437463,437596..437598,437740..437742,
437824..437826,437881..437883,437887..437889))
/locus_tag="RB2501_05265"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143503"
misc_feature complement(order(437005..437007,437881..437883))
/locus_tag="RB2501_05265"
/note="catalytic residues [active]"
/db_xref="CDD:143503"
misc_feature complement(order(436861..436863,436885..436887,
436897..436899,437002..437007,437209..437211,
437452..437454))
/locus_tag="RB2501_05265"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143503"
gene 438620..439276
/locus_tag="RB2501_05270"
/db_xref="GeneID:8454750"
CDS 438620..439276
/locus_tag="RB2501_05270"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194061.1"
/db_xref="GI:260060981"
/db_xref="GeneID:8454750"
/translation="MGAQISPGAYKAVEMHGDTTRNHLLLVSDNYIIHTTYDSQPAHF
ISTMGGFYEIGEDSLRVDLEFNTDYEKTGEKVHRVSYGYADGNLIFNENHARPYRREP
DLDQPLDGAWLFATRGPDTGQERRGDNSARKTLKFLNNGYFQWVAYNSETMDFMGSGG
GRYAADQGIYTEQIQFFSRDDSRVGAELEFSFERKGDDWHHTGKNSRGEPMYEIWSIR
"
gene complement(439383..439817)
/locus_tag="RB2501_05275"
/db_xref="GeneID:8454751"
CDS complement(439383..439817)
/locus_tag="RB2501_05275"
/codon_start=1
/transl_table=11
/product="molybdenum cofactor biosynthesis protein C"
/protein_id="YP_003194062.1"
/db_xref="GI:260060982"
/db_xref="GeneID:8454751"
/translation="MVDITHKEVTLRSATAEAIVRTGREETIRAIREGRVPKGDVLEM
SKAAGLLGVKQTPYLLPDCHPLPIEEARVAYEMDGMEIRILMTVRTHYKTGVEVEAMH
GASVVALTIYDMLKPIDKEVEIRTIRLLEKTGGKSDIRRSAD"
misc_feature complement(439404..439817)
/locus_tag="RB2501_05275"
/note="MoaC family, prokaryotic and eukaryotic. Members of
this family are involved in molybdenum cofactor (Moco)
biosynthesis, an essential cofactor of a diverse group of
redox enzymes. MoaC, a small hexameric protein, converts,
together with MoaA, a guanosine...; Region: MoaC_PE;
cd01420"
/db_xref="CDD:29626"
misc_feature complement(order(439413..439448,439596..439616,
439623..439700,439806..439817))
/locus_tag="RB2501_05275"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:29626"
misc_feature complement(order(439455..439463,439638..439652,
439698..439706))
/locus_tag="RB2501_05275"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29626"
misc_feature complement(order(439470..439472,439479..439481,
439512..439514,439521..439529,439536..439538,
439626..439631,439635..439637,439656..439658,
439704..439706))
/locus_tag="RB2501_05275"
/note="putative active site [active]"
/db_xref="CDD:29626"
gene complement(439837..440304)
/locus_tag="RB2501_05280"
/db_xref="GeneID:8454752"
CDS complement(439837..440304)
/locus_tag="RB2501_05280"
/codon_start=1
/transl_table=11
/product="molybdopterinconverting factor subunit"
/protein_id="YP_003194063.1"
/db_xref="GI:260060983"
/db_xref="GeneID:8454752"
/translation="METKKETEKGIAKKKALFIEGPIAPDFIAQSIAKHQSKTGIGAH
DIFLGQVRADEIDGKTVTGIAYTAYEEMAHEKMHEIREDLFGKYDLSCMHIYHSLGEV
AVGEICLFVFVSSPHRKAVFEALHELVERIKKELPVFGKELFGDDSYAWKVNK"
misc_feature complement(439849..440226)
/locus_tag="RB2501_05280"
/note="MoaE family. Members of this family are involved in
biosynthesis of the molybdenum cofactor (Moco), an
essential cofactor for a diverse group of redox enzymes.
Moco biosynthesis is an evolutionarily conserved pathway
present in eubacteria, archaea and...; Region: MoaE;
cd00756"
/db_xref="CDD:58647"
misc_feature complement(order(439915..439917,439927..439929,
439951..439953,439957..439959,439984..439986,
440149..440151,440155..440157,440161..440175,
440179..440181,440194..440196,440206..440208))
/locus_tag="RB2501_05280"
/note="MoaE homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:58647"
misc_feature complement(order(439852..439854,439885..439893,
439897..439899,439903..439908,440014..440016,
440068..440070,440080..440082,440089..440091,
440098..440100,440104..440106))
/locus_tag="RB2501_05280"
/note="MoaD interaction [polypeptide binding]; other site"
/db_xref="CDD:58647"
misc_feature complement(order(439885..439887,439906..439908))
/locus_tag="RB2501_05280"
/note="active site residues [active]"
/db_xref="CDD:58647"
gene 440557..440628
/locus_tag="RB2501_t10138"
/db_xref="GeneID:8454753"
tRNA 440557..440628
/locus_tag="RB2501_t10138"
/product="tRNA-Arg"
/codon_recognized="AGG"
/db_xref="GeneID:8454753"
gene 441066..441137
/locus_tag="RB2501_t10140"
/db_xref="GeneID:8454754"
tRNA 441066..441137
/locus_tag="RB2501_t10140"
/product="tRNA-Arg"
/codon_recognized="CGG"
/db_xref="GeneID:8454754"
gene 442099..442764
/locus_tag="RB2501_05285"
/db_xref="GeneID:8454755"
CDS 442099..442764
/locus_tag="RB2501_05285"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_003194064.1"
/db_xref="GI:260060984"
/db_xref="GeneID:8454755"
/translation="MKTLHIDSVRKSYQNKVILSDIYLACKTGEIVGLLGRNGSGKST
LLKIIFGSERADNKFVRAGDRIIRNITDGRNLVNYLPQDNFLPRGVRIRTLFELFLTS
KMNRHILEHEYVQPLLNKKNDELSGGEKRIVEILLLIHSNADFILLDEPFNGLSPKLC
DYICEYIKQLAPTKGFIISDHDYTNIINPSDRIVVLKDGYLREIKDKAELVELGYLLE
SHL"
misc_feature 442099..442734
/locus_tag="RB2501_05285"
/note="ABC-type (unclassified) transport system, ATPase
component [General function prediction only]; Region:
YhbG; COG1137"
/db_xref="CDD:31332"
misc_feature 442108..442734
/locus_tag="RB2501_05285"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 442204..442227
/locus_tag="RB2501_05285"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(442213..442218,442222..442230,442342..442344,
442543..442548,442639..442641)
/locus_tag="RB2501_05285"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 442333..442344
/locus_tag="RB2501_05285"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature 442471..442500
/locus_tag="RB2501_05285"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 442531..442548
/locus_tag="RB2501_05285"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 442555..442566
/locus_tag="RB2501_05285"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 442627..442647
/locus_tag="RB2501_05285"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 443214..443288
/locus_tag="RB2501_05290"
/db_xref="GeneID:8454756"
CDS 443214..443288
/locus_tag="RB2501_05290"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194065.1"
/db_xref="GI:260060985"
/db_xref="GeneID:8454756"
/translation="MKQKFDKMREAVKNKQPNFSILHF"
gene 443304..443747
/locus_tag="RB2501_05295"
/db_xref="GeneID:8454757"
CDS 443304..443747
/locus_tag="RB2501_05295"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194066.1"
/db_xref="GI:260060986"
/db_xref="GeneID:8454757"
/translation="MKRQLFFGSFITLLCGGLIYVLFRTATLKMFVWYETIGLGGLIN
ELRNWSFQFAGKLPEWILFSLPDGLWIFSYVCLMLAIWRNSFSFKNAIWILIIPILAI
SSEIGQYLGLVIGTFDFADLLFYIFGMTLPFIFFTKTINLKFQIK"
gene complement(443740..443874)
/locus_tag="RB2501_05300"
/db_xref="GeneID:8454758"
CDS complement(443740..443874)
/locus_tag="RB2501_05300"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194067.1"
/db_xref="GI:260060987"
/db_xref="GeneID:8454758"
/translation="MSELTEFDELEDDEELSSSILPKAMKTNIANAMNEIKCFKFSFI
"
gene 443960..444292
/locus_tag="RB2501_05305"
/db_xref="GeneID:8454759"
CDS 443960..444292
/locus_tag="RB2501_05305"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194068.1"
/db_xref="GI:260060988"
/db_xref="GeneID:8454759"
/translation="MSTGNQFADLKKEEGNQYLVLNTTFKNTDDESRMIMDGEVLINY
NGKEYLFDKSETVMLEGWGLMLDQINPLTSKTTNLVYKIPSEITGPAYYRPGRSNSDD
LIVIGNIQ"
misc_feature <443987..444211
/locus_tag="RB2501_05305"
/note="Domain of unknown function (DUF4352); Region:
DUF4352; pfam11611"
/db_xref="CDD:204689"
gene 444633..445070
/locus_tag="RB2501_05310"
/db_xref="GeneID:8454760"
CDS 444633..445070
/locus_tag="RB2501_05310"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194069.1"
/db_xref="GI:260060989"
/db_xref="GeneID:8454760"
/translation="MRSIQAWKMPSTKSDHLNDVWLLENPRKTKFSIQEIYQFRSMKV
EDLIEKSIKSYLDFQSYNQPTDLAKAIQSSGLTVSDEIKELFPKLAPLMSRRHHIVHQ
ADRNNKVGSGHHKYKSLNLREVKDWISTIDSFAELLIIEIHNG"
gene 445063..445383
/locus_tag="RB2501_05315"
/db_xref="GeneID:8454761"
CDS 445063..445383
/locus_tag="RB2501_05315"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194070.1"
/db_xref="GI:260060990"
/db_xref="GeneID:8454761"
/translation="MGKFEITQDKSGKFRFKLKARNGQIILSSQAYTTKSAAEKGIES
VKINSNNISRIIRKRSNDGKFYFNLKAANGQIIGTSPLYNSKTGREGSIHTLKESKEV
ETST"
misc_feature 445087..>445197
/locus_tag="RB2501_05315"
/note="Domain of unknown function (DUF1508); Region:
DUF1508; pfam07411"
/db_xref="CDD:191742"
misc_feature 445246..>445356
/locus_tag="RB2501_05315"
/note="Domain of unknown function (DUF1508); Region:
DUF1508; pfam07411"
/db_xref="CDD:191742"
gene 445751..446920
/locus_tag="RB2501_05320"
/db_xref="GeneID:8454762"
CDS 445751..446920
/locus_tag="RB2501_05320"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194071.1"
/db_xref="GI:260060991"
/db_xref="GeneID:8454762"
/translation="MQLLKTLLLSGLLLLFLACSKGDSGTDQTTNPPNNQSGQSPDSG
SDSDENPADDENTGGQPDAVDMEDFTAAVADFMANRGLKGGQVAITRNEKLVYLQSFG
DADDETPVHDQSLFRVASISKPITVLAISRLVADGKLSMGDRVFGTNGLLGTQYGTPP
YQDGVEKITVNELVEHKSGFKNEPYDIMFDEVSLSHQQLIDRVLDERTYVRSNPYYYS
NFGYCLLGRVIEAVTGMSYEDYVEQKILSPMGISAMKIGGNTLDERFENEVLYNSSWF
DPYAMNVTRMDAHGGWIASAKDLARIAVHSDTRSVVPDLLDFGDAESYLENGTYLHYG
ALPGTLAVLSVNSPFCYTAVFNTGNANYDSVLNAFADFMNDQITSRQEWPEADLF"
misc_feature 445925..>446785
/locus_tag="RB2501_05320"
/note="Beta-lactamase class C and other penicillin binding
proteins [Defense mechanisms]; Region: AmpC; COG1680"
/db_xref="CDD:31866"
misc_feature 445955..>446692
/locus_tag="RB2501_05320"
/note="Beta-lactamase; Region: Beta-lactamase; pfam00144"
/db_xref="CDD:201034"
gene complement(446956..449076)
/locus_tag="RB2501_05325"
/db_xref="GeneID:8454763"
CDS complement(446956..449076)
/locus_tag="RB2501_05325"
/codon_start=1
/transl_table=11
/product="serine/threonine kinase"
/protein_id="YP_003194072.1"
/db_xref="GI:260060992"
/db_xref="GeneID:8454763"
/translation="MDGNQHIMPDTPSKKEHFISRAETLLLENIARENFGVSELAEAM
NMSRSSLLRKVRKHTGLSASQFIRQVRLKQGMEMLRQTTLNVTEVSYRVGFGSTSYFI
KCFREHYGYPPGEAAERALENASAEPGDSPMEAGASAHGTPLTSAVKPRWKSIAAVAL
ALGILAFLLYFLSRPPTSIEVEKSIAVLPFKNESSDTTNTYFVNGLMESTLNNLQKIE
DLRVVSRPSVEKYRHSDKTIQEMAGELEVNYFIAGSGQREGDRVLLNIQLIEAATDRQ
IWAEQYSRELGDIFALQHEVAQKIAAAIEAIVTPAEREQIEKVPTENLAAYDYYLQAL
EPYHAGNGEGLLRAIGLFEQAIGEDPQFAQAYANMAIAYFLLDMDLAEKKYTDRINNL
ADKALLYDSKLAESLVAKALYYMQVKQYRLALPHLEKALEYNPNSVLVYQLLSDYYAR
IVPDTGKYLEYALKGNQLEFGAGDSITRSYSNLHLGNAFIQTGFPDQAMEYIDQSIAY
FPQNEYASFVRVFIQFAIDRDLGRMQRSLVREWQKDTTRLDILQEVGKSFYFQEEYDS
AYYYYGKFVRAREGSGLDIYPQEDLKIGRVFEAVGRPEMAGEFYRSYAAYCERDESIY
KPASLAVKYAHEGKLDQAIEQLEVFAAQDNFQYWILLFIEKDPVMEPLEGHPGYAAVL
QKIRDRFWAHHERLEKELEQEGLL"
misc_feature complement(448732..448968)
/locus_tag="RB2501_05325"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature complement(448732..448836)
/locus_tag="RB2501_05325"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature complement(448150..448563)
/locus_tag="RB2501_05325"
/note="TolB amino-terminal domain; Region: TolB_N;
cl00639"
/db_xref="CDD:207145"
misc_feature complement(<447931..448101)
/locus_tag="RB2501_05325"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(447769..448035)
/locus_tag="RB2501_05325"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(447787..447789,447796..447798,
447808..447810,447844..447846,447889..447891,
447922..447924,447934..447936,447967..447969,
448012..448014,448021..448023,448033..448035))
/locus_tag="RB2501_05325"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(447772..447990)
/locus_tag="RB2501_05325"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(order(447826..447831,447838..447843,
447850..447855,447952..447957,447964..447969,
447973..447978))
/locus_tag="RB2501_05325"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(447544..447864)
/locus_tag="RB2501_05325"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(447601..447606,447613..447618,
447727..447732,447739..447744,447748..447753,
447838..447843,447850..447855,447859..447864))
/locus_tag="RB2501_05325"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(447562..447564,447571..447573,
447583..447585,447619..447621,447658..447660,
447667..447669,447691..447693,447742..447744,
447787..447789,447796..447798,447808..447810,
447844..447846))
/locus_tag="RB2501_05325"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene 449237..449806
/locus_tag="RB2501_05330"
/db_xref="GeneID:8454764"
CDS 449237..449806
/locus_tag="RB2501_05330"
/codon_start=1
/transl_table=11
/product="ankyrin"
/protein_id="YP_003194073.1"
/db_xref="GI:260060993"
/db_xref="GeneID:8454764"
/translation="MKTLKIKPLKSLIYTAFLGALLISSAGSCQDAKSQTGVARPEMD
IHTAVLYGNLDAVKQHVAAGTDLDSQDPMGGYPLIAAATFGHTEIAETLIDGGADISV
TNNDGSTALHAAAFFCRVEIVQALLDANADKTVRNKFGSTPRESVMGSFSDVKPIYEM
MQSQLGALGLKLNMEELEETRPVIAMMLQ"
misc_feature 449369..449665
/locus_tag="RB2501_05330"
/note="ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can range
from 2 to over 20 (ankyrins, for example). ANK repeats may
occur in combinations with other...; Region: ANK; cd00204"
/db_xref="CDD:29261"
misc_feature 449369..449647
/locus_tag="RB2501_05330"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:205076"
gene 449881..450930
/locus_tag="RB2501_05335"
/db_xref="GeneID:8454765"
CDS 449881..450930
/locus_tag="RB2501_05335"
/codon_start=1
/transl_table=11
/product="acyltransferase"
/protein_id="YP_003194074.1"
/db_xref="GI:260060994"
/db_xref="GeneID:8454765"
/translation="MLLVYHIAIIFQPWAMLVGFIGTEEPLEAIWKPMTLLNVWRIPL
LFYVSGMGVCFAIRKRNWLQLLRERSQRILLPFVFGFLAIAPLHFLVFQEYYGLPLGY
YPHAGHLWFLGNIFCYVLLLSPLFFYLKKHEEGRFVQKLRYLMRKAVGPLSVISFFVI
EALLVRPRPFELYAETWHGFFIGLLAFFFGFLFVLIGKPFWQTVLKWRWLYIGLAASL
YTLRFLEFNLSAPGYLMAIESNLWIFGIFGFGYKYLNRPGATLRYLSQAAYPVYIIHM
AVLYTAAMLILPLELSPFLKFLGITVFTGVICMLLYEFVIRRIGFLRPLFGLKVKAGT
ETRKPVLPKSAGTME"
misc_feature 449899..450819
/locus_tag="RB2501_05335"
/note="Acyltransferase family; Region: Acyl_transf_3;
pfam01757"
/db_xref="CDD:201957"
misc_feature 450001..450858
/locus_tag="RB2501_05335"
/note="OpgC protein; Region: OpgC_C; cl00792"
/db_xref="CDD:199344"
gene complement(450957..451580)
/locus_tag="RB2501_05340"
/db_xref="GeneID:8454766"
CDS complement(450957..451580)
/locus_tag="RB2501_05340"
/codon_start=1
/transl_table=11
/product="transcription regulator"
/protein_id="YP_003194075.1"
/db_xref="GI:260060995"
/db_xref="GeneID:8454766"
/translation="MKRTVWAFIALALTLSCNGPSNTHDTPADPSAGSGSQSAESGAM
RDAADSPDPDFDPETRLAELGIDLPEAATPVANYVNAVRSGNLIFLAGKGPKKADGTY
ITGQVGTDLTEEEGYEAARLTAINQLAVLKAELGNLDRVVRIVKVHGMVNAAPGFTNQ
PEVINGFSDLMVAVFGDRGKHARAAVGMGSLPRNISVEVEAVVEVRD"
misc_feature complement(450969..451394)
/locus_tag="RB2501_05340"
/note="This group of proteins belong to a large family of
YjgF/YER057c/UK114-like proteins present in bacteria,
archaea, and eukaryotes with no definitive function. The
conserved domain is similar in structure to chorismate
mutase but there is no sequence...; Region:
YjgF_YER057c_UK114_like_1; cd02199"
/db_xref="CDD:100006"
misc_feature complement(order(450975..450977,450981..450983,
450987..450989,451017..451043,451065..451067,
451077..451079,451086..451088,451131..451133,
451137..451139,451143..451148,451152..451154,
451305..451310,451314..451316,451320..451322,
451329..451331,451335..451337,451344..451349))
/locus_tag="RB2501_05340"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100006"
misc_feature complement(order(450987..450989,451032..451034,
451086..451088,451098..451100,451347..451349))
/locus_tag="RB2501_05340"
/note="putative active site [active]"
/db_xref="CDD:100006"
gene complement(451669..451863)
/locus_tag="RB2501_05345"
/db_xref="GeneID:8454767"
CDS complement(451669..451863)
/locus_tag="RB2501_05345"
/codon_start=1
/transl_table=11
/product="DNA-binding protein"
/protein_id="YP_003194076.1"
/db_xref="GI:260060996"
/db_xref="GeneID:8454767"
/translation="MKNTIRVLRAEKNWTQEQLASAIGVSRQTINAIEKEKFDPSLPT
AFRIARLFEKPIEAIFTFEE"
misc_feature complement(451687..451857)
/locus_tag="RB2501_05345"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature complement(order(451759..451761,451834..451836,
451846..451848))
/locus_tag="RB2501_05345"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature complement(order(451762..451764,451837..451839))
/locus_tag="RB2501_05345"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature complement(order(451756..451761,451771..451773,
451780..451782,451813..451818))
/locus_tag="RB2501_05345"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene complement(451881..452291)
/locus_tag="RB2501_05350"
/db_xref="GeneID:8454768"
CDS complement(451881..452291)
/locus_tag="RB2501_05350"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194077.1"
/db_xref="GI:260060997"
/db_xref="GeneID:8454768"
/translation="MQTIDMNQTTRKQQLRNLGAWTFAWVLSTALVVFGAEFIWDGNP
WITIVALAVNILVGIGMILSNRRLLENCDELEKKIQLESMGLTLGLTLVVGIAFSMMD
ATNLIPFDAEIAFLVMFMGICYMLAIWFNNRRYR"
gene complement(452385..453023)
/locus_tag="RB2501_05355"
/db_xref="GeneID:8454769"
CDS complement(452385..453023)
/locus_tag="RB2501_05355"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194078.1"
/db_xref="GI:260060998"
/db_xref="GeneID:8454769"
/translation="MISKPIFLRLLAGFLLVSCWGCATLKQEEDPYAETWESVVESQN
WKYALELGPDDAAARQEAYFALPDWTDGSSASADPEFVETYPKLVSRAYFRLIAEAMK
ADRRIRRSFQELSLEIRNTDSKPSRKLQRDYETARRRYIAHRQMLEGLLAWKAFNTYG
SDDLEFFMREQLRPSLALYRKGAQQERILDYLMTELADLYHKPEEGILDNSL"
gene complement(453153..456293)
/locus_tag="RB2501_05360"
/db_xref="GeneID:8454770"
CDS complement(453153..456293)
/locus_tag="RB2501_05360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194079.1"
/db_xref="GI:260060999"
/db_xref="GeneID:8454770"
/translation="MKRYFLLAGLLSLAFSTSFAQEINEYLTPVKFRNIGPFRGGRST
GSSGVVGDPLTYYMGTTGGGLWKTTDAGQRWTNISDGYFKTGSVGAVTVSESHPNVVY
VGMGEHAPRGVMTSYGDGVYKSVDGGKTWEHLGLELTRHISRIIVHPENPDRVWVAAQ
GALHGPTRERGIYKSEDGGKTWKNVLFVNELTGCSDLSMDVHNPQVLYAAMWEHIRKP
WQVVSGGPGSGLYKSTDGGETWKQIHKGLPEEKGKMAIAVSRANPDRLYAVIESDTQK
EKGGLFTSANAGASWSRVSDDHRLVQRAWYYIEVTPDPVDEHTVYVLSASAYRSIDGG
RNWEQIRTNHGDYHDLWINPKNPKNMVISDDGGAEITFDGGSSWSRQDNMPTAQFYRV
AVDSLFPYNLYGGQQDNTSVKIASIGMGSSGIGREHWSPSAGGESAFLGFDPNDPKKV
MGGSYLGYVELLDVPSQTGTLVMIEPNLYLGLPAREMKYLFNWNAPIIRSMHEPDTYY
HAAQYVLRTRDQGMSWDVISPDLTRDLDEKQGNGGAPYTNEAVGAENYGTISYLIESP
HEPGTMYAGSDDGMVHITRDGGATWQDVTPKGQGETLVNAIEISPHDPGTVYIATTRY
KFNDFRPGLLKSTDYGKSWTAINRGIPDGAYTRVVREDPVRKDLLVAGTETGLYLSYN
GGTDWERFQSNLPVVPITDLQIRFGDLILATQGRSFWICDDMALLRQVPGRTDGLKLY
TPGDAIYPNWYSSMDGPDPNGTHPFAGVNPPSGMPVYYQLPQTVDSTELRLEIRDASG
KLVRAFSSQADDSYRSYEGAPPRPPVLPSQPGLNRFVWDMRYPPLPGAPEVYIEGSFR
GHRAIPGTYTLELIHGDTRQKATASILPNPALPTTEAEFSDYHEFMEGAEATYREMTH
MTNGMREARMRLKDLIGHLEEAGKPELAGQGKDLAAEMDQWDSTMVQRLSKAYDDVEN
YVNGFTAEYLTALNHGDSGIPRVNKGTKEKIAALNQRWAQHRATARRILDSRVPGFNA
ALQEAGIGALYLPPMP"
misc_feature complement(<455574..456101)
/locus_tag="RB2501_05360"
/note="Sialidases or neuraminidases function to bind and
hydrolyze terminal sialic acid residues from various
glycoconjugates as well as playing roles in pathogenesis,
bacterial nutrition and cellular interactions. They have a
six-bladed, beta-propeller fold...; Region: Sialidase;
cl01922"
/db_xref="CDD:92329"
misc_feature complement(455118..455972)
/locus_tag="RB2501_05360"
/note="Uncharacterized protein related to plant
photosystem II stability/assembly factor [General function
prediction only]; Region: COG4447"
/db_xref="CDD:34127"
misc_feature complement(order(455748..455756,455763..455771))
/locus_tag="RB2501_05360"
/note="Asp-box motif; other site"
/db_xref="CDD:29333"
gene complement(456364..457341)
/locus_tag="RB2501_05365"
/db_xref="GeneID:8454771"
CDS complement(456364..457341)
/locus_tag="RB2501_05365"
/codon_start=1
/transl_table=11
/product="large multifunctional protein- glycosyl
hydrolase"
/protein_id="YP_003194080.1"
/db_xref="GI:260061000"
/db_xref="GeneID:8454771"
/translation="MKISRFPFAGGPLGVPAARILTSVMLLAGIYISSAQPDSPVIGR
WDLTVSMDGRELPSWLEVKLSGQSTLVGYYVSFAGSARPISEVHADRGSFSFSLPPQW
IGKHYMHVHGKVEGDTISGELLYHTGTSHSFKGVRAPELLREEPEAWTPARPLIADSG
LDGWTTTPGSDTNQWEVVDGVLNSPASGANLMTIEKFDDFKLHVEFRVPEGSNSGIYL
RGRYEVQVEDSYGKQPESIYLGGVYGFLSPNEMAAARAGEWQTYDITLVGRRVTVVLN
GKTIIHRQIIPGITGGALDSAEGEPGPIMLQGDHGPISYRNMTVSVPAN"
misc_feature complement(456382..456891)
/locus_tag="RB2501_05365"
/note="Domain of Unknown Function (DUF1080); Region:
DUF1080; pfam06439"
/db_xref="CDD:203451"
gene 457471..457869
/locus_tag="RB2501_05370"
/db_xref="GeneID:8454772"
CDS 457471..457869
/locus_tag="RB2501_05370"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194081.1"
/db_xref="GI:260061001"
/db_xref="GeneID:8454772"
/translation="MTQILFANSPEAYAAIEELADTIWREHYIPIIGKPQVDYMLRKF
QTAGAIAGQSAAGMRYYLLEDRGQPAGYFAYEKQGEALFLSKIYVLKSHRGRGLARAA
MEHIRNQAGVWGCRQIALTVTGHLASILGL"
misc_feature 457648..457833
/locus_tag="RB2501_05370"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(457729..457737,457765..457770)
/locus_tag="RB2501_05370"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 457874..457966
/locus_tag="RB2501_05375"
/db_xref="GeneID:8454773"
CDS 457874..457966
/locus_tag="RB2501_05375"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194082.1"
/db_xref="GI:260061002"
/db_xref="GeneID:8454773"
/translation="MGFGKGEGTVQGPLGMAFIMDDYRMVLELS"
gene complement(458009..458701)
/locus_tag="RB2501_05380"
/db_xref="GeneID:8454774"
CDS complement(458009..458701)
/locus_tag="RB2501_05380"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194083.1"
/db_xref="GI:260061003"
/db_xref="GeneID:8454774"
/translation="MLASALVTFLALEFQIAYNVDLTLLSIAIVFPLVFSIRGSFRRR
EKALQHFSQFRSALKTLSYYIGSNEALPQEQKNHMAGLLSSISDKTIEHLGRNDPSTK
AVDESINHIHEYLLELGALAPVKLKDRVFRFLNDLHEGFENLHAINIHRTPVSLKAYC
LIFIYLFPLVYAPNILMNIGTTHPDIVVFFIVLLTQFILVTLYNIQDQLEYPFDEDGL
DDIKLQNFKIDR"
gene 458792..459853
/locus_tag="RB2501_05385"
/db_xref="GeneID:8454775"
CDS 458792..459853
/locus_tag="RB2501_05385"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194084.1"
/db_xref="GI:260061004"
/db_xref="GeneID:8454775"
/translation="MKIQSRLLGCLLILLLQLPGAILGQQEPADGAAKPLFSSTERLD
VRLSYSNRDLIRDTNDSTYLNTMLLYRVGDEAWDSVEVRIRARGNWRKANCFLAPVKV
RIKKAAARGTLFEGIKELKFVLPCAPTDDCADYVLKEYLAYKFYEMVTPFHFRTRRMR
LEYVDQKKRNEKAYELEAFMIEDIANVADRNRGKRLKRTVHPLQQDHLSSVQNDFFQF
MIGNTDFSSAYQHNEKLIFVDGRQAIPIPYDFDMSGMVNAHYAVVSSVQGDNLDIEKV
TQRLFRGFKRDPQVFDAVRRQYLDLKPRVMAYLDSMAEDFHNSRQFQNTRDFLENFFQ
ILRDDTSYREQILVSARDQ"
gene complement(459860..461536)
/locus_tag="RB2501_05390"
/db_xref="GeneID:8454776"
CDS complement(459860..461536)
/locus_tag="RB2501_05390"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194085.1"
/db_xref="GI:260061005"
/db_xref="GeneID:8454776"
/translation="MGSIRLIFLLLLTFPVGYGQSDAALRPKLVVGVVVDQMRFDYLE
KYRENFGDGGFLRLLREGYSFENMQYDYIPTVTAAGHASIYTGTTPSGHGIIGNSWYD
RDAGRIVDNVGDTTVQIIGSLMPNGEGRSPARLMAPTLSDRLREWAGPESRIISISLK
DRGAILPGGHQADAAYWHDWETSPGYFVSSTYYMDALPAWVEDFNAAGLSENYMHQTW
TPLLPMEAYKNSAPDDNPYEVVLKGKDAPVFPYDLAAMRSEYGEGQPYHNILWATPYG
NELVREFALRALRSEELGKDSIPDFLGISFSTPDVAGHTFGPQSVEMADIYLRLDRDI
AKLLQALDQEVGQGRYLLFLTSDHGVHPVVSQAQEQGLPAGLAVLPRYRQDLMFHLSL
RYGAFNWIESFGTEQIYLNRKLAEEKGIPLAEIQQVAAAFMAEQPGVRYALTASDLAE
KAMKAPLPAMLQKGFYANRSGDVLLVYEPGYAPTMNYRIAVSEVRGATHGSGYAFDTH
VPLLWFGAGIPQGSTDRLVHPANIVPTLTRVLNLTPLPGAAGQPLDELLD"
misc_feature complement(<461246..461449)
/locus_tag="RB2501_05390"
/note="Sulfatase; Region: Sulfatase; cl10460"
/db_xref="CDD:213119"
misc_feature complement(460034..>460729)
/locus_tag="RB2501_05390"
/note="Type I phosphodiesterase / nucleotide
pyrophosphatase; Region: Phosphodiest; pfam01663"
/db_xref="CDD:201911"
gene complement(461643..462764)
/locus_tag="RB2501_05395"
/db_xref="GeneID:8454777"
CDS complement(461643..462764)
/locus_tag="RB2501_05395"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_003194086.1"
/db_xref="GI:260061006"
/db_xref="GeneID:8454777"
/translation="MRESVNIAYVRSLGRLSFIRFPGLGPKQKPIMLTISIKANSISE
YFAQVQNVLGGELTDYWGEYVLDIDNQYARGSLRYREFEWGASVFDYDIVFHQPTVFR
ICTIRYNPIHFVYCLEGHSEHRFGHESETRKFEQFQSVIVTGPAEGFQTGEFPAGVPL
KINSIRIDREKFISNRLQVVETLNQRLYDVFHDVERRQAFAYQGSYNLALAPLVEKLY
SLESRGLIRIMQIEGLILQILSAHIMDHEESMAGTNGNVRVLSRELMIVRDIARQISE
QVAGDYSLPALSKATGLSQYKLQEGFKSLYTRTVADYVRHVRLETARNLLRKTDMNIS
EVVYSVGFNSRSYFSNIFKKQYGLSPSDFISKLRRTGSD"
misc_feature complement(461676..461924)
/locus_tag="RB2501_05395"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature complement(461673..461783)
/locus_tag="RB2501_05395"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 462985..463272
/locus_tag="RB2501_05400"
/db_xref="GeneID:8454778"
CDS 462985..463272
/locus_tag="RB2501_05400"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194087.1"
/db_xref="GI:260061007"
/db_xref="GeneID:8454778"
/translation="MTYEFYSGLIVGIISGVCLLILLRTLFSRAKATDRASESPGRDR
DQQVQPFIPMNHRQINYFQGGEDASVSRIKEKLRQFKIRNGFYMEADESNW"
gene 463891..464289
/locus_tag="RB2501_05405"
/db_xref="GeneID:8454779"
CDS 463891..464289
/locus_tag="RB2501_05405"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194088.1"
/db_xref="GI:260061008"
/db_xref="GeneID:8454779"
/translation="MMRLFAISMSALMLLQSFHVTVSDLVQLDELLEHAQYHRQQFGD
NFFVFLSKHYGAEKEEHSREHQEEQPQHEQLPFQQLAHLSGAHTFILRKPAFEFGWLP
ESPAQKPNFHYIPLRSTPFQSGVFQPPRQA"
gene 464370..468701
/locus_tag="RB2501_05410"
/db_xref="GeneID:8454780"
CDS 464370..468701
/locus_tag="RB2501_05410"
/codon_start=1
/transl_table=11
/product="transport-related, membrane protein"
/protein_id="YP_003194089.1"
/db_xref="GI:260061009"
/db_xref="GeneID:8454780"
/translation="MLNNIIDFSIKNKFLVLLFTGALAATGLYSLTRLSVGAVPDVTN
NQVQVITTSRNLSTQDMERFITYPVELEMANLPGVEEIRSVSKFGLSVVTIVFEDRLG
TYLPRQLIAEKLNAAADRIPEGFGTPTMGPISTGLGEIYQYILDVEPEFRDRYTATEL
RTIQDWIIKRQLSGIPGVVEVNTWGGNLKQYEVAVNSDRLMAMGVTVSDLVDALEGNN
GIAGGSYIEKGNQAYFIRGEGLIGSLEDIRNTVVKTIDGIPLYVRDVAQVGFGRAPRF
GAITGNGEGEKVLGQVMMLKGANSKEVIQAVKERVASISRSLPKGVYINAFLDRSELI
ARTTSTVVENLVLGCLIVIFVVVLLLGNFRSGLIVASVIPLSLLFGISLMHLFGVDAN
LMSLGAIDFGIIIDGAVIIVEYIAYRLSRRLPGSAEGGGEPLNIRRDRITREGASKMM
TSAIFGQLIILIVFIPILALSGVEGKMFRPMALAFSFTLIGAIILCFTYVPVMSSLIL
KPVDPDRRTFPNRMMTRLKHWYGRALGWAFRRKRMVISAAGACLLLALGLFAIMGAEF
VPTLDEGDFVIQPVLKTGTSLQKTIETTTRIENILLEEFPEVEQVVTRIGAAEVPTDP
MSMEESDVIITLKPRSEWVSATSKDGLAARFKEALAVIPGLEVEFTQPIEMRFNELIT
GVRADIAVKVFGEDLNQLARLGDRIKTLAETVPGAADIVVEKIEGLPQLNISYDRERI
ARYGLNIREINQTLSLAYAGRPVGQVYEGERRFDLVLRLEEGHRGRLEEVGQLFIDLP
GGGKVPLSEVARVELQEGAAKISRDDTRRRMVVGINVRNRDLQSVVDDIRGLVEEKID
LPPGYSITYGGQFENLRSAKSRLAVAVPIALLLIFIMLYFAFGSAQDALMIFSAIPLS
AVGGVFLLWLRGMPFSISAGVGFIALFGIAVLNGIVMIEHFKELMKKGGENLEALIRR
GATDRLRAVLLTASAAALGFLPMAVSTNAGAEVQRPLATVVIGGLVSATLLTLIVLPV
LYSLFSRKDKKVGFPLPRGGKLPGVLMLLVLSGPLQAQDLGISLDSLLARAEKNNSRL
RAADLRRETAEALRGTAFTLDKAELFYSRDQNNLANGVPLDVIGIRQRFEFPTVYTAK
RNALRYEAAMANNSYESEKRDLYLQISSLYNSYVIAREKLRIYRQLDTLYSRFARAAD
RRFELGATNYLEKVTARSKQQQIRLELQAARTRASKLESEIRLQVQDDSLPPLEAPPP
MELVAAPPDISQIPEIRNFQNRLAAQKYTRKLEANRLLPDLSAEYFRGTNEVTKNAFE
GYLLGVSIPVFFGGQASRIRAARLAESAIIEDQKAYSLGLDTRQEQLQEQLQQERQAL
SYYKEEGNQLATAIMEAAEAGFHNGEIDFFRYIESLENSYGIRLDYLDQLESYNQSIL
NINFIKY"
misc_feature 464370..467495
/locus_tag="RB2501_05410"
/note="Putative silver efflux pump [Inorganic ion
transport and metabolism]; Region: COG3696"
/db_xref="CDD:33492"
misc_feature 467589..468110
/locus_tag="RB2501_05410"
/note="Outer membrane efflux protein; Region: OEP;
pfam02321"
/db_xref="CDD:202204"
misc_feature 468195..468692
/locus_tag="RB2501_05410"
/note="Outer membrane efflux protein; Region: OEP;
pfam02321"
/db_xref="CDD:202204"
gene 468736..469911
/locus_tag="RB2501_05415"
/db_xref="GeneID:8454781"
CDS 468736..469911
/locus_tag="RB2501_05415"
/codon_start=1
/transl_table=11
/product="cation efflux system protein"
/protein_id="YP_003194090.1"
/db_xref="GI:260061010"
/db_xref="GeneID:8454781"
/translation="MLLLAVGLGACNSRENPAGNLADREPAGDIVLISPEQFDGNGMQ
LGHPQMRNFAEILEVSGTIDVPPENRAVVSAVRGGFVKSISLLVGDRVRKGQRIAALE
NPEFLQLQQDYLETREQLPYKKAEYRRQKTLYGEKISSEKSYLQAESDYKTALARLGG
LGSQLKLLNFDPETLEPGNLRAESQVYAPIAGSVTQVNVIKGAFVSQATEIVEIVDDD
HIHLELTVYEKDIGKLRIGQPIRFSLPEQSGQQYNAEVYLIGTSIGPDRTVKVHAHLA
EATGANLLVGMFVRAQIELGDPGTGENSGSTSVTGARDNASPSAMLSLPEGAVVTQGG
QSYILVLEEQREDGYRMRQIPISTGQKARGFVAVTGDGLSRETTVLVRGAFSLIAAP"
misc_feature 468886..469896
/locus_tag="RB2501_05415"
/note="RND family efflux transporter, MFP subunit; Region:
RND_mfp; TIGR01730"
/db_xref="CDD:162505"
misc_feature 469288..469593
/locus_tag="RB2501_05415"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene complement(469925..472399)
/locus_tag="RB2501_05420"
/db_xref="GeneID:8454782"
CDS complement(469925..472399)
/locus_tag="RB2501_05420"
/codon_start=1
/transl_table=11
/product="penicillin acylase"
/protein_id="YP_003194091.1"
/db_xref="GI:260061011"
/db_xref="GeneID:8454782"
/translation="MEKLPNSPRLAYRRLLKALQPVVGAVLLMATLTACRQEREAGPT
IPGIQENVEVIRDPYGINHIYAKNEHDLFFAQGYLAARDRLFQFEIWRRQATGTVAEI
LGERELQRDIGTRLFAYRGDLEEDFGVYHPRGSAIIRAYTDGVNAYIEEALAHPESLP
LEFRALGILPGKWTPDVVISRHQGLLGNSDEELAIGRAVAAIGEEAVKSLLWFHPKEP
DLELADGIDAESLSEDILKLYNAYRKPVRFEPEDMDPGFPGSSVALENLMGNPDTPDL
LTAADKPALPVSDSLSIGSNNWVVAGERTASGHPVMANDPHRRISVPSLRYMVHLVAP
GWDVIGGGEPEIPGVSIGHNPHGAWGLTVFRTDGEDIYVYDTDPEDPDRYRYREGWEE
METIRESIPVKGREAEDVTLKYTRHGPVLFQDTLRNKAYAMRCAWLEPGGAPYLASLR
MDQARSWEEFREACNYSHIPGENMVWADTAGNIGWQAVGIAPIRPNFSGLVPVPGDGS
HEWDGYLPIVEKPHALNPDKDFIATANQNVSPPEYDRWDAVGYSWSDPFRGDRIEEVL
GREKPLDLKEMQALQTDYLSLPARELTPYLQGMEFSGRAAEAREQLSGWDYRLEPESV
AAAIYVAWENRIREAAHEQFVPEAAKPHIGSLQLERILQWVREPGQRFGNPSARSAFL
KEAFESAVEGLEQRLGADMSQWQYGQPKLKHITIRHPLSGLLPDRRESLDLGPLPRGG
NGYTPGSTGNNMNQSSGATFRLVVPVGDWDRARAMNSPGQSGDPDSPYYGNLFEAWAR
DQYFPLYYSRDSILKHADARMVLQPE"
misc_feature complement(469961..472363)
/locus_tag="RB2501_05420"
/note="Protein related to penicillin acylase [General
function prediction only]; Region: COG2366"
/db_xref="CDD:32513"
misc_feature complement(<471938..472240)
/locus_tag="RB2501_05420"
/note="The Ntn hydrolases (N-terminal nucleophile) are a
diverse superfamily of of enzymes that are activated
autocatalytically via an N-terminally lcated nucleophilic
amino acid. N-terminal nucleophile (NTN-) hydrolase
superfamily, which contains a...; Region: Ntn_hydrolase;
cl00467"
/db_xref="CDD:212223"
misc_feature complement(470636..471517)
/locus_tag="RB2501_05420"
/note="Penicillin G acylase (PGA) belongs to a family of
beta-lactam acylases that includes cephalosporin acylase
(CA) and aculeacin A acylase. PGA and CA are crucial for
the production of backbone chemicals like
6-aminopenicillanic acid and...; Region: Ntn_PGA_like;
cd03747"
/db_xref="CDD:73357"
misc_feature complement(order(470795..470797,470984..470986,
471056..471058,471305..471307,471311..471313,
471347..471349,471446..471448,471515..471517))
/locus_tag="RB2501_05420"
/note="active site"
/db_xref="CDD:73357"
gene complement(472401..474482)
/locus_tag="RB2501_05425"
/db_xref="GeneID:8454783"
CDS complement(472401..474482)
/locus_tag="RB2501_05425"
/codon_start=1
/transl_table=11
/product="Penicillin amidase superfamily protein"
/protein_id="YP_003194092.1"
/db_xref="GI:260061012"
/db_xref="GeneID:8454783"
/translation="MKRFFFCLIASVCLISCEQEGQEARIVWDTYGVPHIYASNQEDL
FFMQGWAQMHNHANHILKLYGTSRGRGAEYWGPSKLADDQLIRTMGFDVLAEEWADSQ
DPELREIYAAFVRGMNAYAEAHPEAIQPENREVLPITPKDVNMHSMYVVFTRFIGGSD
LGRVQRWPDMGSNTYAVGPSRSASGNAMLVQNPHLPWFGEFLFFESNLILEGRRMYGT
TLVGFPGIAIGFNENLGWSHTDNTIDNSDLYEVELTEGGYLLDGEPTPFQESATTIRV
RQEDGSLSDVELPLFRTEHGPVVKRGDDKALTIRMVGMDRPNMFLQWWRMINSSNLEE
FENALQMAQIPFWNVMYADRFGDIFYLFNGLVPQRGQDAWAYWDRVVPGGKSADIWTE
VHPYEDLPKVKNPANGWLQNANDPPWTSTIPMTLNPDDYPGYMAPRYMPFRPQRSARM
LLEDESVTFEELQEYKLSTRLEFADRILDDLARAVDSLGSDGARAAMDHLEAWDRTAD
AESTGTLLFFNWAQKFGPYRGSNYAVAWDEEAPTTTPDGLADPARAVQLLEASAEEIT
GKYGTLEVPWGDYYRINYNGKDLPANGTDGSLGVFRVAWPGSGDEDHLYVGGGDSWVG
VIEFADSVRAKVLLSYGNATQPGSPHFGDQLELFSRKEFRDAWFTDSAIESNTARVEK
LEEIQPKSATE"
misc_feature complement(472461..474416)
/locus_tag="RB2501_05425"
/note="Penicillin amidase; Region: Penicil_amidase;
pfam01804"
/db_xref="CDD:145130"
misc_feature complement(472860..474407)
/locus_tag="RB2501_05425"
/note="Cephalosporin acylase (CA) belongs to a family of
beta-lactam acylases that includes penicillin G acylase
(PGA) and aculeacin A acylase. PGA and CA are crucial for
the production of backbone chemicals like
6-aminopenicillanic acid and...; Region: Ntn_CA; cd01936"
/db_xref="CDD:73289"
misc_feature complement(order(473241..473243,473763..473765,
473901..473903,473967..473969))
/locus_tag="RB2501_05425"
/note="active site"
/db_xref="CDD:73289"
misc_feature complement(472479..>472673)
/locus_tag="RB2501_05425"
/note="The Ntn hydrolases (N-terminal nucleophile) are a
diverse superfamily of of enzymes that are activated
autocatalytically via an N-terminally lcated nucleophilic
amino acid. N-terminal nucleophile (NTN-) hydrolase
superfamily, which contains a...; Region: Ntn_hydrolase;
cl00467"
/db_xref="CDD:212223"
gene complement(474532..475050)
/locus_tag="RB2501_05430"
/db_xref="GeneID:8454784"
CDS complement(474532..475050)
/locus_tag="RB2501_05430"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194093.1"
/db_xref="GI:260061013"
/db_xref="GeneID:8454784"
/translation="MQFNNRKISNQFRVFHRYLGFFLAGIMAVYAISGIVLTFRNTDY
MKSDVQVNTNLPTGLEGEELGSALRRRGFEVERTEGDMIYFQGGSYNVATGEARYTEK
RLPVVLEKMNNLHKMHSGNPLFWLGIFFGVALLFFSISAFWMFMPGAPVFKKGLYFAG
AGFLLTVILLFV"
misc_feature complement(474928..475029)
/locus_tag="RB2501_05430"
/note="PepSY-associated TM helix; Region: PepSY_TM_1;
pfam13172"
/db_xref="CDD:205353"
gene complement(475270..478518)
/locus_tag="RB2501_05435"
/db_xref="GeneID:8454785"
CDS complement(475270..478518)
/locus_tag="RB2501_05435"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194094.1"
/db_xref="GI:260061014"
/db_xref="GeneID:8454785"
/translation="MRHTFLLLLGAFLLLQGMPTHAQRNKSKNAVEEKKLPLQAFKFR
NVGPAFLSGRIADLAIHPEDDDTWYVAVGSGGVWKTENAGTTWTPLFDEQASYSTGCL
TLDPQNPAIIWVGTGENVGGRHVAYGDGIYRSKDGGASWENLGLKQTEHISKIIVHPD
NSDVVWVAAQGPLWSKRGERGVYKTTDGGATWNRVLGNAEWTGATDLLIDPRDPQVLY
AATWDRHRTVAALMGGGPGTGIHKSTDGGETWEELTSGLPKSNMGKIGLAISPQDPDV
LYAAIELDRTQGAVYRSADRGASWKKMSNTVSGGTGPHYYQELYASPHKFDRLYLMNV
RVLTSEDGGKTFTQLKEEDKHSDNHAMAFKKDDPDYLMIGTDAGIYESFDLAETWRYH
KNLPLTQFYKVAVNNAEPFYHIFGGTQDNGSAGGPSATDEEEGIANRHWYKTLGADGH
QSATDPEYNNIIYAETQQGGLHRVDLTTGEQVYIQPQPGPGDPHERFNWDAPIVVSPH
NPARLYFASYRVWKSENRGDSWTPISGDLTRNEERLELPIMGRQQSWDNAWDVGAMSN
YNTITSLSESPVQEGLLYAGTDDGYIAVSSDGGGSWDRIPVTRLGLPARSFVNDIKAD
LHDANTVYVALDNHKEGDFNPYLFKSTDRGQSWTSIAADLPERTLVWRLVQDHVNPSL
LFAATEFGVYTSLDGGSNWQKLPGTPNMGFRDLAIQKRENDLVAASFGRGFFVLDDYS
ALREMTPENLSARGKLFAPRPAKWYVPRSELGNTGADFYLAENPEFGAVFTYHLADEF
TTAKEARQKAEKAANEKKADIPFPGYAALDEENSEQPARVWLTIRDSQGNVIRHIQQK
ASQGTHRIAWDLRHASTGAIDPERDSRGWFSRGPLATPGNYTASLSLEKEGEVTVLDE
GVSFEVKPIREGVLGGMDYDNYNTYRRDLAEVQRRMEVLRDRFEQAETSLKGFEKALE
QTPASPAGLAGEVQELREAIRELQIKTEGSPARDEIGERNPPSVQNFFVTAYRGMNTT
YGPTAMHRQSLDTARDMLGELEPQVNRIADQMVPALERKLEAAGAPYIKGRD"
misc_feature complement(477610..478284)
/locus_tag="RB2501_05435"
/note="BNR repeat-like domain; Region: BNR_2; pfam13088"
/db_xref="CDD:205269"
misc_feature complement(477334..>477792)
/locus_tag="RB2501_05435"
/note="BNR repeat-like domain; Region: BNR_2; pfam13088"
/db_xref="CDD:205269"
gene complement(478610..479392)
/locus_tag="RB2501_05440"
/db_xref="GeneID:8454786"
CDS complement(478610..479392)
/locus_tag="RB2501_05440"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194095.1"
/db_xref="GI:260061015"
/db_xref="GeneID:8454786"
/translation="MLKILKYSFYDLMRSRWSYVYFLFYLLLGSVLLFLNNDLSKAVI
TLMNIIIILVPLIATIFGVMYFYNSREFTELLLAQPLKRSSIFLGQFLGVAGSLTLSL
VLGLGLPFVLYGLFQSGVIVNFALLILIGAFLTFIFAGLAFNIAIFNENKIKGFGYAV
LLWLFMAVIYDGLFLLALIAFEEYPLDSFSLAATVFNPIDLSRILILLELDISALLGY
TGAVFKKFLGTQLGFLISGAVLILWTLLPVWSLYRKAKKKDF"
gene complement(479385..480095)
/locus_tag="RB2501_05445"
/db_xref="GeneID:8454787"
CDS complement(479385..480095)
/locus_tag="RB2501_05445"
/codon_start=1
/transl_table=11
/product="ATP-binding transport protein"
/protein_id="YP_003194096.1"
/db_xref="GI:260061016"
/db_xref="GeneID:8454787"
/translation="MIQIDNVHKRFAKNEVLKGVDLQIPEGGIYAVLGPNGSGKTTLI
KCVLGLVIPNKGDIRVKGQKVKNQWKYREEINYLPQIANFPGNIRVKELIGMIKDLRK
KPGDEVSLIELFGLEPFLDKKLANLSGGTKQKVNLVLTFMFDSPVIILDEPTSGLDPT
AMIALKNLIRKEREAGKTFLITTHIMQFVEEIADQVVYLLEGKIYYTGTLSGLLEKTG
QHDLEHAIAAITSEKQHA"
misc_feature complement(479469..480095)
/locus_tag="RB2501_05445"
/note="ABC-type polar amino acid transport system, ATPase
component [Amino acid transport and metabolism]; Region:
GlnQ; COG1126"
/db_xref="CDD:31323"
misc_feature complement(479484..480092)
/locus_tag="RB2501_05445"
/note="This family of ATP-binding proteins belongs to a
multisubunit transporter involved in drug resistance (BcrA
and DrrA), nodulation, lipid transport, and lantibiotic
immunity. In bacteria and archaea, these transporters
usually include an ATP-binding...; Region:
ABC_DR_subfamily_A; cd03230"
/db_xref="CDD:72989"
misc_feature complement(479973..479996)
/locus_tag="RB2501_05445"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72989"
misc_feature complement(order(479544..479546,479640..479645,
479856..479858,479970..479978,479982..479987))
/locus_tag="RB2501_05445"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72989"
misc_feature complement(479856..479867)
/locus_tag="RB2501_05445"
/note="Q-loop/lid; other site"
/db_xref="CDD:72989"
misc_feature complement(479688..479717)
/locus_tag="RB2501_05445"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72989"
misc_feature complement(479640..479657)
/locus_tag="RB2501_05445"
/note="Walker B; other site"
/db_xref="CDD:72989"
misc_feature complement(479622..479633)
/locus_tag="RB2501_05445"
/note="D-loop; other site"
/db_xref="CDD:72989"
misc_feature complement(479538..479558)
/locus_tag="RB2501_05445"
/note="H-loop/switch region; other site"
/db_xref="CDD:72989"
gene complement(480092..481276)
/locus_tag="RB2501_05450"
/db_xref="GeneID:8454788"
CDS complement(480092..481276)
/locus_tag="RB2501_05450"
/codon_start=1
/transl_table=11
/product="copper-binding periplasmic protein"
/protein_id="YP_003194097.1"
/db_xref="GI:260061017"
/db_xref="GeneID:8454788"
/translation="MSARTIDVCKDCRVTSIREGIRLAEPYDTLLIGKGYYREYNILV
DKPLSLIGEGYPIIDGEEQGEVIRVVADDVRIQGFAIRNVGVSYTSDHAAIRVVQSEG
FAIEDNRFENLFFGIYLEKSRGGVVRGNQISGDAVDEYNSGNGIQLWYSNNVEVSENR
IEGVRDGIYLEFSDTIRIRGNSSRKNLRYGLHFMFSNDNVYSDNLFENNGAGVAVMFS
KRIRMTGNRFRKNWGTAAYGMLLKEINDAEIIGNLFEENTVGINIEGSNRITYEGNNF
VSNGWAIRVLGACYSNNFHRNNFLYNSFDLSYNSNVNDNSFEGNYWSNYSGYDLDKNG
VGDVPHRPVKLFSYIVNRTPETLILLRSLFMDLIDFSERVSPVFTPDNLADNQPQMRI
IK"
misc_feature complement(480104..481228)
/locus_tag="RB2501_05450"
/note="nitrous oxide reductase family maturation protein
NosD; Region: NosD_copper_fam; TIGR04247"
/db_xref="CDD:211970"
gene complement(481369..481788)
/locus_tag="RB2501_05455"
/db_xref="GeneID:8454789"
CDS complement(481369..481788)
/locus_tag="RB2501_05455"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194098.1"
/db_xref="GI:260061018"
/db_xref="GeneID:8454789"
/translation="MFSGLLIALAAGCKVAPEPIDYGADACQFCRMAIVDQQHGAEIV
TNKGKVFKFDAVECMMNHLREVEAQSVSLFLVNTYPRPGELLDATQASYLVSKGIPSP
MGEYLTAFENEAQAVEAQIKHGGDVYTWQEINNRFKD"
misc_feature complement(481390..481773)
/locus_tag="RB2501_05455"
/note="NosL; Region: NosL; cl01769"
/db_xref="CDD:207477"
gene complement(481858..482472)
/locus_tag="RB2501_05460"
/db_xref="GeneID:8454790"
CDS complement(481858..482472)
/locus_tag="RB2501_05460"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194099.1"
/db_xref="GI:260061019"
/db_xref="GeneID:8454790"
/translation="MKKASTLMILGPLFLLGLYFLPLWNIMLGAPQYPEPLGMNIHIN
GIRGVSEFDIQNIDGLNHYIGMRTLPKDEDMWEFSAFPIIVGAMIVLGIIVGVLGYFK
KVGYRWFFGWFLLMSVLGIMGMYDFNNWMVDYGTNLDPNAIMKLENPDGTPMTYKPPL
FGHVKMLNFDVTSLPAPGAWMMFVGMTMTLLAGYLGWKSSKKTE"
gene complement(482579..484537)
/locus_tag="RB2501_05465"
/db_xref="GeneID:8454791"
CDS complement(482579..484537)
/locus_tag="RB2501_05465"
/codon_start=1
/transl_table=11
/product="nitrous oxide reductase"
/protein_id="YP_003194100.1"
/db_xref="GI:260061020"
/db_xref="GeneID:8454791"
/translation="MKHIKSIIGITLSGAALLFSGCNQGGGSSNGALTSSAAEKVYVA
PGEQDEYYAFLSGGYSGNLTVYGLPSGRMFKEIPVFSQFPTSGYGYSEETKPMLNTSY
GFVPWDDAHHPDISQTNGELDGRWIFINGNNTPRIARVSLSTFETEEIIEVPNSAGNH
SSSFITENTEYVVAGTRFSVPVPQRDMPINEYKGNFKGALTFITVDQEHGHMDIKFQL
LMPGFNYDLSHPGRGKSHGWFFFTTYNTEEASTLQEVNSSQNDKDFIAAINWKKIEEY
VNNGGGTKMPANYAHNVYDESTHMATTTMEKEVLTVNPAEVPGAIFFLPTPKSPHGCD
VDPSGEYIIGNGKLSADLTVHSFDRMIAAIEGEKFDGEAYGIPILKFEDVLAGTVKSG
GLGPLHTEFDADGNAYTTFFISSEVVKWKLGSWEVIDRKPTFYSVGHLMIPGGNSRKP
FGKYVVAMNKITKDRYLPTGPEMEHSAQIYDISGEKMELIYDFPTHGEPHYAAGCPAD
LLRENSKKIYRLDENNHPYGIKSPADARVERDGRDVHIYMSTIRSHFTPDNIEGIKVG
DRVYFHMTNHEQDFDVPHGFAVIGANTSEILIMPGQTKTIVWEPKQVGVWPFYCTDFC
SALHQEMQGYVRVSPANSNLELSWSLGE"
misc_feature complement(482621..484426)
/locus_tag="RB2501_05465"
/note="nitrous-oxide reductase, Sec-dependent; Region:
nitrous_NosZ_Gp; TIGR04246"
/db_xref="CDD:211969"
misc_feature complement(482627..>482872)
/locus_tag="RB2501_05465"
/note="Cytochrome C oxidase subunit II, periplasmic
domain; Region: COX2; cl11412"
/db_xref="CDD:209309"
gene complement(484579..485154)
/locus_tag="RB2501_05470"
/db_xref="GeneID:8454792"
CDS complement(484579..485154)
/locus_tag="RB2501_05470"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194101.1"
/db_xref="GI:260061021"
/db_xref="GeneID:8454792"
/translation="MKTINQTFFWCIILMGLAIMGCKSDPEASAQATDSGSGVEVSKE
QGQAFIKDEASEPNILNIAAGSPDHTTLTAAVQAADLENALVNAGPLMVFAPTNEAFD
ALPAGTVEDLLKPENKDALANILKFHVTPGNYDKEFLKKFKKLGQANDQSVPVEVKGD
DVYVGGAKIVASVPASNGIIHVVDKVMLPPQ"
misc_feature complement(484582..>485004)
/locus_tag="RB2501_05470"
/note="Secreted and surface protein containing
fasciclin-like repeats [Cell envelope biogenesis, outer
membrane]; Region: COG2335"
/db_xref="CDD:32486"
misc_feature complement(484588..484956)
/locus_tag="RB2501_05470"
/note="Fasciclin domain; Region: Fasciclin; pfam02469"
/db_xref="CDD:202249"
gene complement(485161..485652)
/locus_tag="RB2501_05475"
/db_xref="GeneID:8454793"
CDS complement(485161..485652)
/locus_tag="RB2501_05475"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194102.1"
/db_xref="GI:260061022"
/db_xref="GeneID:8454793"
/translation="MSLLVGLITLSCGEKKENKEADGFKIERKSSQDATKAETPATEG
VKASERVDLTNKGVGPITSVTLDPEIDQEMAAEGEAVYNQMCLACHKVGKRFIGPAPN
GILERRTPEWVMNMILAPEKMVKEDPLAKDLLMEFNGSPMANQGLTEEQARAVLEYFR
TLK"
misc_feature complement(485164..485424)
/locus_tag="RB2501_05475"
/note="Cytochrome c; Region: Cytochrom_C; pfam00034"
/db_xref="CDD:200944"
gene 485697..485807
/locus_tag="RB2501_05480"
/db_xref="GeneID:8454794"
CDS 485697..485807
/locus_tag="RB2501_05480"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194103.1"
/db_xref="GI:260061023"
/db_xref="GeneID:8454794"
/translation="MYRWNTAENMIFVIKRIKTSFNLRMVKSATEIPDFK"
gene 485804..486235
/locus_tag="RB2501_05485"
/db_xref="GeneID:8454795"
CDS 485804..486235
/locus_tag="RB2501_05485"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194104.1"
/db_xref="GI:260061024"
/db_xref="GeneID:8454795"
/translation="MISKTAKYAIKAVIYLGLHSSEPKKILTRDMYEQIHVSESYLAK
ILQVLSRHNIISSIKGRNGGFYLSEENKNHTLMDIVRVVDGGQYVESCVLGISNCNSE
NPCALHDLVGKGKTEFNRVLEEVTIKKLIASLEDRQVYFPL"
misc_feature 485804..486217
/locus_tag="RB2501_05485"
/note="Predicted transcriptional regulator
[Transcription]; Region: COG1959"
/db_xref="CDD:32142"
misc_feature 485807..486052
/locus_tag="RB2501_05485"
/note="Transcriptional regulator; Region: Rrf2; pfam02082"
/db_xref="CDD:202106"
gene complement(486431..486898)
/locus_tag="RB2501_05490"
/db_xref="GeneID:8454796"
CDS complement(486431..486898)
/locus_tag="RB2501_05490"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194105.1"
/db_xref="GI:260061025"
/db_xref="GeneID:8454796"
/translation="MKYAIFFLMLAIPLLGNSQNSDYSVSSYKDEGRKAPNTHYIGEA
WLNGVLRAEGDLPYNITKATFKANSTLDWHKHDAPQVLIVVEGEGYYQERGKDPMRMK
VGDVIKCEKETEHWHASSKEHDVTYLAIYTGETTWTEVLSQEAYDAVAEKLKK"
misc_feature complement(486482..>486754)
/locus_tag="RB2501_05490"
/note="Uncharacterized conserved protein, contains
double-stranded beta-helix domain [Function unknown];
Region: COG1917"
/db_xref="CDD:32101"
gene 486984..488231
/locus_tag="RB2501_05495"
/db_xref="GeneID:8454797"
CDS 486984..488231
/locus_tag="RB2501_05495"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194106.1"
/db_xref="GI:260061026"
/db_xref="GeneID:8454797"
/translation="MRGCLFAALLIICSQIGRGQTLKECYQESQEAFQVKDYERYLDL
TRQALQLHPSHPELLLNEVEGLILCGREKQAYQALGRYLSWDASDRFEQKPAVDSFMR
QGSFRKKLDKKLRAYSKTIRRSETFLRLAEKHHFEDIALTPDYIILSEVNQGAVHFLS
RQDHRLVAKVTLPGSALSLLVGDNGQYLYATTSVIPQFAGYNPEQQYKSYLSQIDIGT
KSVEGSLEIPGESILGSMASNGQGTIYISDSRRPILYRVNARNLELVQTLEISDAFNL
QGITYNHADQKLYLADYIKGILSLDANDLSIRKWLRSPEFLLKGIDGLSALDSRNLIG
IQNNSNPMRLIRISIEASGELKRVQLLDNDLDLGGEPTNGKLLANHAFYYIANSPWPH
YDPDTHKPQPDKWQGLVINRIQF"
gene 488233..488679
/locus_tag="RB2501_05500"
/db_xref="GeneID:8454798"
CDS 488233..488679
/locus_tag="RB2501_05500"
/codon_start=1
/transl_table=11
/product="GCN5-related N-acetyltransferase"
/protein_id="YP_003194107.1"
/db_xref="GI:260061027"
/db_xref="GeneID:8454798"
/translation="MQPRITPYKEAHWPEIRRIFLSNTPKYFDPGELQDLRDYLDRQA
DSYFVLTIEDQVVGSGGYCLSGPGLGRLTWDFLDPAFKGQGLGSVLIEHCLHCLTSDP
GIEKEEVCTSQLAYQFYERFGFELIRKEKDYWAKNLDLYYMVKRLV"
misc_feature 488245..488673
/locus_tag="RB2501_05500"
/note="Sortase and related acyltransferases [Cell envelope
biogenesis, outer membrane]; Region: COG1247"
/db_xref="CDD:31440"
misc_feature 488371..>488520
/locus_tag="RB2501_05500"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature <488458..488628
/locus_tag="RB2501_05500"
/note="N-Acyltransferase superfamily: Various enyzmes that
characteristicly catalyze the transfer of an acyl group to
a substrate; Region: NAT_SF; cl00357"
/db_xref="CDD:213096"
misc_feature order(488461..488463,488491..488496)
/locus_tag="RB2501_05500"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(488820..488893)
/locus_tag="RB2501_t10160"
/db_xref="GeneID:8454799"
tRNA complement(488820..488893)
/locus_tag="RB2501_t10160"
/product="tRNA-Asn"
/codon_recognized="AAC"
/db_xref="GeneID:8454799"
gene complement(489044..490387)
/locus_tag="RB2501_05505"
/db_xref="GeneID:8454800"
CDS complement(489044..490387)
/locus_tag="RB2501_05505"
/codon_start=1
/transl_table=11
/product="protease"
/protein_id="YP_003194108.1"
/db_xref="GI:260061028"
/db_xref="GeneID:8454800"
/translation="MSPILIQALQFLLSLSLLIVLHEMGHFLPAKAFKTRVEKFYLFF
DIKFSLFKKKIGETVYGIGWLPLGGYVKIAGMIDESMDTDQMNEPPKPWEFRSKPAWQ
RLIIMLGGVTVNFLVAWVIYIGTSFAYGDAYIAADSIEDGYHVTNPVLLELGVQTGDK
LVAIDGQRYAKYDDLRRNMITADRITIERDGVEREIELPEDFLGQLSTGEDLSLFNLR
FPFMVGEVSDSSLNKDADLQPGDLVLSLAGEPVKYYDQVAPIMDTLANRTIPVSIERD
AETRTLQLQTDENGKLGIYPGGSMKRFSEMGYFDTVTEEYSFGESIAVGGRKFVDQIG
GYWLQLKKIFTPSTGAYKGVGGFKAIFDIFPDFWSWQGFWEITAFLSIMLAVLNLLPI
PALDGGHVMFLLYEMVSGRKPSDKFMEYAQMVGFFLLIALILFANGNDVYKALFK"
misc_feature complement(489050..490324)
/locus_tag="RB2501_05505"
/note="Predicted membrane-associated Zn-dependent
proteases 1 [Cell envelope biogenesis, outer membrane];
Region: COG0750"
/db_xref="CDD:31093"
misc_feature complement(<490016..490324)
/locus_tag="RB2501_05505"
/note="RseP-like Site-2 proteases (S2P), zinc
metalloproteases (MEROPS family M50A), cleave
transmembrane domains of substrate proteins, regulating
intramembrane proteolysis (RIP) of diverse signal
transduction mechanisms. In Escherichia coli, the S2P
homolog...; Region: S2P-M50_PDZ_RseP-like; cd06163"
/db_xref="CDD:100084"
misc_feature complement(order(490310..490312,490319..490324))
/locus_tag="RB2501_05505"
/note="active site"
/db_xref="CDD:100084"
misc_feature complement(489794..>489928)
/locus_tag="RB2501_05505"
/note="PDZ domain, also called DHR (Dlg homologous region)
or GLGF (after a conserved sequence motif). Many PDZ
domains bind C-terminal polypeptides, though binding to
internal (non-C-terminal) polypeptides and even to lipids
has been demonstrated; Region: PDZ; cl00117"
/db_xref="CDD:206846"
misc_feature complement(489533..489724)
/locus_tag="RB2501_05505"
/note="PDZ domain of bacterial and plant zinc
metalloprotases, presumably membrane-associated or
integral membrane proteases, which may be involved in
signalling and regulatory mechanisms. May be responsible
for substrate recognition and/or binding, as most PDZ...;
Region: PDZ_metalloprotease; cd00989"
/db_xref="CDD:29046"
misc_feature complement(489059..>489274)
/locus_tag="RB2501_05505"
/note="Site-2 protease (S2P) class of zinc
metalloproteases (MEROPS family M50) cleaves transmembrane
domains of substrate proteins, regulating intramembrane
proteolysis (RIP) of diverse signal transduction
mechanisms. Members of this family use proteolytic...;
Region: S2P-M50; cl10020"
/db_xref="CDD:209123"
misc_feature complement(489215..489226)
/locus_tag="RB2501_05505"
/note="putative substrate binding region [chemical
binding]; other site"
/db_xref="CDD:100078"
gene 490504..491229
/locus_tag="RB2501_05510"
/db_xref="GeneID:8454801"
CDS 490504..491229
/locus_tag="RB2501_05510"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194109.1"
/db_xref="GI:260061029"
/db_xref="GeneID:8454801"
/translation="MTGMRPLRTFAKKHAMRSLLFRYKYFWITLVVVSGVIIYLMYNA
LEPRQVLPVYQPADFNPELVDAEISHIKKYHRVADFSLVNQNGDTITRSDYDGHIYIA
DFFFTTCPTICPIMTENMAYLQDELRDQPEVLLLSHSVTPEIDSVPRLKEYALEKGVM
DEKWNLVTGDKKQIYELARKSYMAVKTDGDGGPFDMIHTENFILVDKEGRIRGTYDGT
RREEMARLLEELQILQASYAAPD"
misc_feature 490591..491157
/locus_tag="RB2501_05510"
/note="Uncharacterized protein SCO1/SenC/PrrC, involved in
biogenesis of respiratory and photosynthetic systems
[General function prediction only]; Region: COG1999"
/db_xref="CDD:32182"
misc_feature 490732..491154
/locus_tag="RB2501_05510"
/note="SCO (an acronym for Synthesis of Cytochrome c
Oxidase) family; composed of proteins similar to Sco1, a
membrane-anchored protein possessing a soluble domain with
a TRX fold. Members of this family are required for the
proper assembly of cytochrome c...; Region: SCO; cd02968"
/db_xref="CDD:48517"
misc_feature order(490828..490830,490840..490842,491095..491097)
/locus_tag="RB2501_05510"
/note="Cu(I) binding site [ion binding]; other site"
/db_xref="CDD:48517"
gene 491438..491671
/locus_tag="RB2501_05515"
/db_xref="GeneID:8454802"
CDS 491438..491671
/locus_tag="RB2501_05515"
/codon_start=1
/transl_table=11
/product="ferrous iron transport protein A"
/protein_id="YP_003194110.1"
/db_xref="GI:260061030"
/db_xref="GeneID:8454802"
/translation="MNVADLRRGERGVIKEFTEDVLPIKLLELGCLPGNIIEMVQVAP
LRDPIYINVNGSHIAIRREVARQIALEPLPSNE"
misc_feature 491438..491653
/locus_tag="RB2501_05515"
/note="FeoA domain; Region: FeoA; pfam04023"
/db_xref="CDD:202856"
gene 491664..493901
/locus_tag="RB2501_05520"
/db_xref="GeneID:8454803"
CDS 491664..493901
/locus_tag="RB2501_05520"
/codon_start=1
/transl_table=11
/product="ferrous iron transport protein B"
/protein_id="YP_003194111.1"
/db_xref="GI:260061031"
/db_xref="GeneID:8454803"
/translation="MSKDIKVALIGNPNTGKTSVFNRLTGLNQKVGNYPGITVEKKQG
VCKLSRGIKAHILDLPGTYSLNTTSLDESVVVELLLNRNAPDFPDVAVVISDVENLKR
NLLLFTQIRDLSIPAILVINMADRMRRKGISLDVEALEKRLNTRIALISTRKNTGIET
LKNHIERYREIPASPCVDVSVIDPEYFGRLKKTFPGEELYKLWVVITQDVNFTPLQKN
LRGEAPTYDIKSRGELKRLQHKETILRYQFINGVLKETYKVDWAAAKGLRATFDKVLT
HKVFGYLIFFLILLTIFQAIYDWSEVPMDFIDAGFASASEWIKNTLPPGMFTDLVAEG
VVAGIGGIVIFIPQIAFLFFFIALLEESGYMSRVVFLMDRVMRPFGLSGKSVVPLMSG
TACAIPAVMATRNIESWKERLITILVTPFMTCSARLPVYLIIIALVIPEGRFIGLSYQ
ALTLMLLYLVGFLAAILSAMGLNRILKIPNRSFFVVEMPNYKWPLWKNVFYTVVEKTK
SFVYGAGKIILAISIVLWFLGSTGYSEEFRNAEEIVTERVQSQGFSEYSKAYMDQKMQ
EYRSTLRAGVTPADGRVPVGSVQDSIVKFRSLLELRAVNQEIAGYKLEHSLIGRMGKF
IEPAVEPLGYDWKIGIAVLTSFAAREVFVGTLATIYSVGSDEEETIKNRMAAEVKEDT
GEPLFNLASGISLLLFYAFAMQCMSTLAIVKRETNSWKWPILQLVFMSAFAYIVAFAA
YQILA"
misc_feature 491667..>493259
/locus_tag="RB2501_05520"
/note="Fe2+ transport system protein B [Inorganic ion
transport and metabolism]; Region: FeoB; COG0370"
/db_xref="CDD:30719"
misc_feature 491685..492167
/locus_tag="RB2501_05520"
/note="Ferrous iron transport protein B (FeoB) family;
Region: FeoB; cd01879"
/db_xref="CDD:206667"
misc_feature 491694..491717
/locus_tag="RB2501_05520"
/note="G1 box; other site"
/db_xref="CDD:206667"
misc_feature order(491703..491705,491709..491720,492027..492032,
492036..492038,492114..492122)
/locus_tag="RB2501_05520"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206667"
misc_feature 491772..491786
/locus_tag="RB2501_05520"
/note="Switch I region; other site"
/db_xref="CDD:206667"
misc_feature 491775..491777
/locus_tag="RB2501_05520"
/note="G2 box; other site"
/db_xref="CDD:206667"
misc_feature 491835..491846
/locus_tag="RB2501_05520"
/note="G3 box; other site"
/db_xref="CDD:206667"
misc_feature order(491844..491900,491910..491912,491925..491927)
/locus_tag="RB2501_05520"
/note="Switch II region; other site"
/db_xref="CDD:206667"
misc_feature 492027..492038
/locus_tag="RB2501_05520"
/note="G4 box; other site"
/db_xref="CDD:206667"
misc_feature 492114..492122
/locus_tag="RB2501_05520"
/note="G5 box; other site"
/db_xref="CDD:206667"
misc_feature 492741..492971
/locus_tag="RB2501_05520"
/note="Nucleoside recognition; Region: Gate; pfam07670"
/db_xref="CDD:203716"
misc_feature 493020..493181
/locus_tag="RB2501_05520"
/note="Ferrous iron transport protein B C terminus;
Region: FeoB_C; pfam07664"
/db_xref="CDD:203715"
misc_feature <493509..493820
/locus_tag="RB2501_05520"
/note="Nucleoside recognition; Region: Gate; pfam07670"
/db_xref="CDD:203716"
gene 493901..494035
/locus_tag="RB2501_05525"
/db_xref="GeneID:8454804"
CDS 493901..494035
/locus_tag="RB2501_05525"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194112.1"
/db_xref="GI:260061032"
/db_xref="GeneID:8454804"
/translation="MEWNLQNILAYLTVALAIAWLVRKFLWPSAKKSGDCGDGDCGCH
"
gene 494049..494462
/locus_tag="RB2501_05530"
/db_xref="GeneID:8454805"
CDS 494049..494462
/locus_tag="RB2501_05530"
/codon_start=1
/transl_table=11
/product="TonB-linked outer membrane protein"
/protein_id="YP_003194113.1"
/db_xref="GI:260061033"
/db_xref="GeneID:8454805"
/translation="MKNISALLLLAALLLGASCGSSKSGNPNGEITDMQAEMDERNSA
VIPLITRIRRLPGISIQNGVPVLSKSANSMSGSQTEPLYVLDGLAMGNSFRQIENVVQ
PVDVKSIKVLRSSDASFYGSRGANGVIVITTKSGG"
misc_feature 494361..494450
/locus_tag="RB2501_05530"
/note="TonB-dependent outer membrane receptor, SusC/RagA
subfamily, signature region; Region: SusC_RagA_signa;
TIGR04057"
/db_xref="CDD:211899"
gene complement(494463..494876)
/locus_tag="RB2501_05535"
/db_xref="GeneID:8454806"
CDS complement(494463..494876)
/locus_tag="RB2501_05535"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194114.1"
/db_xref="GI:260061034"
/db_xref="GeneID:8454806"
/translation="MRNIIGLITLLATWALPAQNRLEIEVEGVEASEGEIQIALYTHE
KDFLSMEGVFRADSVKASKGTTLISVEDLPAGTYALAIFHDRNSNKRLDTNWIGVPKE
PLGFSNARMRTFGPPTFEDCMMHVQADARITIRLE"
misc_feature complement(494475..494807)
/locus_tag="RB2501_05535"
/note="Uncharacterized protein conserved in bacteria
(DUF2141); Region: DUF2141; pfam09912"
/db_xref="CDD:192410"
gene complement(495041..495478)
/locus_tag="RB2501_05540"
/db_xref="GeneID:8454807"
CDS complement(495041..495478)
/locus_tag="RB2501_05540"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194115.1"
/db_xref="GI:260061035"
/db_xref="GeneID:8454807"
/translation="MARTKRSVFWNLLLVACLVVCALAFTAHYRNWTRLEPHRMQLLS
GIYYLDLPYAEINSVGWVPKLPQLERQSGFSAGALEKGVFRDSLQPARPVYILVDDLR
QDKIAVRYRDSLTLYLNFADSAETHSVYNLLQAKHEEYRTREP"
gene 495733..496254
/locus_tag="RB2501_05545"
/db_xref="GeneID:8454808"
CDS 495733..496254
/locus_tag="RB2501_05545"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194116.1"
/db_xref="GI:260061036"
/db_xref="GeneID:8454808"
/translation="MKKIILLIMGVVCFGATAQDEVVVPGISGMLERVQGQMVDLAGA
FSEEQMGWRPSEGVRSTGETILHTAAANYYIAMRMGFPPPEGVDIMNMEAIEGKDNII
ETYKKSSAFINEKLQMVDPGSFGEEVDFGFAKMNKLSGLLVVLEHNGEHKGQLIAYAR
SNGVVPPWSEGGQ"
misc_feature 495820..496197
/locus_tag="RB2501_05545"
/note="DinB superfamily; Region: DinB_2; pfam12867"
/db_xref="CDD:205116"
misc_feature 495826..496236
/locus_tag="RB2501_05545"
/note="Mycothiol maleylpyruvate isomerase N-terminal
domain; Region: MDMPI_N; cl00986"
/db_xref="CDD:207273"
gene complement(496320..497141)
/locus_tag="RB2501_05550"
/db_xref="GeneID:8454809"
CDS complement(496320..497141)
/locus_tag="RB2501_05550"
/codon_start=1
/transl_table=11
/product="GufA protein"
/protein_id="YP_003194117.1"
/db_xref="GI:260061037"
/db_xref="GeneID:8454809"
/translation="MKAVVDYMQSIDPILAAFYATLFTWGLTALGAALVFFFKTMNRA
VLDGMLGFTGGVMVAASFWSLLAPGIEMSPGEGFEKVMPAAVGFLLGAVFIFGLDKIL
PHLHINFKESEAEGIDTGWRRTTLLTLAITLHNIPEGLAVGVLFGGVAAGFEGASIGG
AVALALGIGLQNFPEGFAVAMPLRRYGLSRKKSWLYGQASAMVEPVAAVLGAWAVLTF
QPILPYALSFAAGAMIFVVVEEVIPETQLDKYTDIATMGFIGGFIIMMALDVGLG"
misc_feature complement(496323..497120)
/locus_tag="RB2501_05550"
/note="Predicted divalent heavy-metal cations transporter
[Inorganic ion transport and metabolism]; Region: COG0428"
/db_xref="CDD:30777"
gene complement(497138..497800)
/locus_tag="RB2501_05555"
/db_xref="GeneID:8454810"
CDS complement(497138..497800)
/locus_tag="RB2501_05555"
/codon_start=1
/transl_table=11
/product="iron dependent repressor"
/protein_id="YP_003194118.1"
/db_xref="GI:260061038"
/db_xref="GeneID:8454810"
/translation="MTHSEENYLKGIYHLCKGGSVAVATNAIAAQMDTKPSSVTDMVK
RLSEKGLVDYRKYQGVSLTESGNRQALKIIRKHRLWELFLVEKLDFKWDQVHEIAEQL
EHIESEVLIDRLDALLEYPDYDPHGDPIPDKNGVFKTREKKLLSAMPVPSEGQFVGVK
DSSATFLRFLDRHRIALGKKVSILEKEEFDKSMRIRLDGEAFRISHQIASNLYIKPNN
AS"
misc_feature complement(497621..497797)
/locus_tag="RB2501_05555"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
misc_feature complement(497444..497719)
/locus_tag="RB2501_05555"
/note="Helix-turn-helix diphteria tox regulatory element;
Region: HTH_DTXR; smart00529"
/db_xref="CDD:197774"
misc_feature complement(497405..497614)
/locus_tag="RB2501_05555"
/note="Iron dependent repressor, metal binding and
dimerisation domain; Region: Fe_dep_repr_C; pfam02742"
/db_xref="CDD:202369"
misc_feature complement(497153..497374)
/locus_tag="RB2501_05555"
/note="FeoA domain; Region: FeoA; pfam04023"
/db_xref="CDD:202856"
gene 497895..500171
/locus_tag="RB2501_05560"
/db_xref="GeneID:8454811"
CDS 497895..500171
/locus_tag="RB2501_05560"
/codon_start=1
/transl_table=11
/product="TonB-dependent outer membrane receptor protein"
/protein_id="YP_003194119.1"
/db_xref="GI:260061039"
/db_xref="GeneID:8454811"
/translation="MNIRCILPIISLLLGLAPALAQDRELRGMVTDSEGPVPLANVYL
RNLETGTATDVDGQFRLEGLPDGTHTLVVSAVGYRTHRQSVRVGPAGSRLEIRLQPRA
EQLNVTVVTGTLKAVRRFESPVPVEVYSPAFIRKNPTANVFEALQAVNGVRPQINCNV
CNTGDIHINGLEGPYTLVLIDGMPIVSGLGTVYGLSGIPNALIEQIEIVKGPASSLYG
SEAVGGLINIITKNALTAPEFFADGFATGWGEYNLDAGGSLRIGENTRVLTGINYFNY
DVPTDNNGDNFTDVTLQDRISVFQKWNFTRDSSREFSLAGRFFYEDRWGGEMQWTPEF
RGTDSIYGESIYTRRWELLGRYQLPLPEKLLLSVSYNDHRQDSWYGDLPYLADQRIGF
GQLSWDKTAGNHDLLIGAALRYNYYDDNTPATDSPRGNDPDRVWIPSLFAQDEYRFSG
KHTLLAGLRYDQDPRHGSIWTPRGAVKLQLGEHELLRLNFGTGFRVVNLFTEDHAALT
GARDVVIAEDLLPEQSWNLNLNYLRKFYTPDGHFFSVDASAFYTDFSNQILPDYDSDP
NRIFYRNLDGRSVSRGFSLNLDAAFANGLRVAAGTTLQDVRVDAEGTNSRPVLTERYS
ATWSVSFPIRPLQLTADYTGNLYGPMRLPLAGDLDPRPEYSPAWSIQNIQFTFKGLEH
MEIYAGVKNLLNWTPNRGTPFLIARAGDPFDKQVQFDASGDPVPSEGNPYGLTFDPAY
VYGPNQGIRGFAGLRYQL"
misc_feature 497970..498188
/locus_tag="RB2501_05560"
/note="Carboxypeptidase regulatory-like domain; Region:
CarboxypepD_reg; pfam13620"
/db_xref="CDD:205798"
misc_feature 498189..499976
/locus_tag="RB2501_05560"
/note="Outer membrane receptor for ferrienterochelin and
colicins [Inorganic ion transport and metabolism]; Region:
FepA; COG4771"
/db_xref="CDD:34384"
misc_feature 498267..499976
/locus_tag="RB2501_05560"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(498267..498296,498324..498353,498390..498407,
498426..498449,498492..498524,498558..498584)
/locus_tag="RB2501_05560"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature 499038..499040
/locus_tag="RB2501_05560"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 500301..501506
/locus_tag="RB2501_05565"
/db_xref="GeneID:8454812"
CDS 500301..501506
/locus_tag="RB2501_05565"
/codon_start=1
/transl_table=11
/product="lycopene cyclase"
/protein_id="YP_003194120.1"
/db_xref="GI:260061040"
/db_xref="GeneID:8454812"
/translation="MEHFDFIIIGGGASGLLLAEAMGRDTWFDGKRIALFEKQEQKGN
DRTWCFWESGEGAFDELIETRWDRMRFRGTGIDRVLPLLPLTYKMLRGEDFYASYYQK
IATCPNIHVIREAVNHVEERPDGAFLKTSRASYTTSRVFSSVPFSQPPLPGRPYPLIR
QHFIGWRVRVPRPVFDPDTPTFMDFGIPQRGNTRFMYVLPDSPTEALLEYTLFSKDLL
EPGEYEAAIEAYLREEYGVGEYEILEKERGSIPMTCNDFTARDSKHITHIGIAGGWAR
PSTGYTFWNSTQLVPRLVKALKSGKRLQMARRDRFWFYDLVLLEVLAGNNARGGEVFS
ALFRRVPPTRILRFLHQQTSLGEDLRIIAACPKRLFIRALWRSFLKSLGGAATPQNRA
APPWPGGFR"
misc_feature 500388..501383
/locus_tag="RB2501_05565"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene complement(501436..502413)
/locus_tag="RB2501_05570"
/db_xref="GeneID:8454813"
CDS complement(501436..502413)
/locus_tag="RB2501_05570"
/codon_start=1
/transl_table=11
/product="isoprenyl synthetase"
/protein_id="YP_003194121.1"
/db_xref="GI:260061041"
/db_xref="GeneID:8454813"
/translation="MIESIEQYRQSFDDYLQKILQFGEPAGLYEPIGYIMDLGGKRMR
PVLVLLSAELFGAPAENALPAAAAVEIFHNFSLVHDDIMDAAPLRRGRPTVHRKWDPN
TAILSGDAMLIRAYQQLDGYPPELFQPLTRLFSRTALEVCEGQQYDMDFESRDDVGIP
EYLRMIEFKTAVLLGCALQMGAIIGGAEVAEQEAVYDFGIRLGLAFQLQDDYLDVFGN
PETFGKQVGGDIIENKKTYLYLQALERCGADDARELRDLYSVRPTNPQSKVDRVRQIF
ETCGADRQTRNQIGGYTREAFARLDTLTGNPRAKAALRDFGEWLLRRDF"
misc_feature complement(501439..502413)
/locus_tag="RB2501_05570"
/note="Geranylgeranyl pyrophosphate synthase [Coenzyme
metabolism]; Region: IspA; COG0142"
/db_xref="CDD:30491"
misc_feature complement(501445..502344)
/locus_tag="RB2501_05570"
/note="Trans-Isoprenyl Diphosphate Synthases,
head-to-tail; Region: Trans_IPPS_HT; cd00685"
/db_xref="CDD:173833"
misc_feature complement(order(501712..501714,501727..501729,
501742..501744,501772..501774,501781..501786,
501895..501897,501904..501909,501970..501972,
501979..501981,502144..502149,502162..502167,
502171..502179,502183..502191,502198..502200))
/locus_tag="RB2501_05570"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:173833"
misc_feature complement(502162..502191)
/locus_tag="RB2501_05570"
/note="chain length determination region; other site"
/db_xref="CDD:173833"
misc_feature complement(order(501712..501714,501727..501729,
501742..501744,501772..501774,501781..501786,
501907..501909,501970..501972,502144..502149,
502162..502164,502171..502176))
/locus_tag="RB2501_05570"
/note="substrate-Mg2+ binding site; other site"
/db_xref="CDD:173833"
misc_feature complement(order(501781..501786,501907..501909,
502144..502149,502162..502164,502171..502176))
/locus_tag="RB2501_05570"
/note="catalytic residues [active]"
/db_xref="CDD:173833"
misc_feature complement(order(501907..501909,501970..501972,
502144..502149,502162..502164,502171..502176))
/locus_tag="RB2501_05570"
/note="aspartate-rich region 1; other site"
/db_xref="CDD:173833"
misc_feature complement(order(501706..501720,501727..501744,
501760..501765,502114..502158))
/locus_tag="RB2501_05570"
/note="active site lid residues [active]"
/db_xref="CDD:173833"
misc_feature complement(order(501712..501714,501727..501729,
501742..501744,501772..501774,501781..501786))
/locus_tag="RB2501_05570"
/note="aspartate-rich region 2; other site"
/db_xref="CDD:173833"
gene 502498..503070
/locus_tag="RB2501_05575"
/db_xref="GeneID:8454814"
CDS 502498..503070
/locus_tag="RB2501_05575"
/codon_start=1
/transl_table=11
/product="sigma-24 factor FecI"
/protein_id="YP_003194122.1"
/db_xref="GI:260061042"
/db_xref="GeneID:8454814"
/translation="MAPAKDNYNNLNRFFRDEYESLSGYVRSRIDDTAERDAEDIIQD
VALRLFSRADDLSQINNIAGFVYRAVRNRIIDVMRTRKGKQSDNERLEERWSEFAERF
YGESAERYPESTMRQLKVGIENLKPNYREVILAVDFEGYSYREYSEMTGISPGTLMSR
RHRALSILQKNFMSEKAVKIITRDIKTVYK"
misc_feature 502498..503031
/locus_tag="RB2501_05575"
/note="DNA-directed RNA polymerase specialized sigma
subunit, sigma24 homolog [Transcription]; Region: RpoE;
COG1595"
/db_xref="CDD:31783"
misc_feature 502537..502743
/locus_tag="RB2501_05575"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature 502843..503004
/locus_tag="RB2501_05575"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(502873..502875,502903..502905,502921..502926,
502954..502956,502960..502965,502969..502977,
502981..502986,502990..502992)
/locus_tag="RB2501_05575"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 503083..503532
/locus_tag="RB2501_05580"
/db_xref="GeneID:8454815"
CDS 503083..503532
/locus_tag="RB2501_05580"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194123.1"
/db_xref="GI:260061043"
/db_xref="GeneID:8454815"
/translation="MDYGKHMEKRMEARVKRGVAKGVKIFFFILLGIGIFLLVGYAFM
LLWNWLMPELFGLPTVGYWKAFGILVLAKLLFGFGGHGSGGGKKKSGKGGERPVCRNR
VFETKDKWAYYDRFWNEEGETAFNNYIQRLNNETGNAPAEEHPGTDR"
gene 503725..504330
/locus_tag="RB2501_05585"
/db_xref="GeneID:8454816"
CDS 503725..504330
/locus_tag="RB2501_05585"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194124.1"
/db_xref="GI:260061044"
/db_xref="GeneID:8454816"
/translation="MKEQIIDTACEMFLQLGFKSVTMDDLAERLGISKKTIYLHFKNK
TELIHECTCNLFEKISLGITCITDQGLNPIEELYEIKKFALTHLKDEKSSPQYQLRKY
YPRIFESLNEQKFAMMKECVLKNINRGMAMGIYRANLDPGFVARIYFAGVTSLNDEDL
FPKSDFPMPGLMDHYLEYHLRGIVTPDGRKVLNKIINSNLE"
misc_feature 503728..504273
/locus_tag="RB2501_05585"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature 503737..503877
/locus_tag="RB2501_05585"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 504331..505734
/locus_tag="RB2501_05590"
/db_xref="GeneID:8454817"
CDS 504331..505734
/locus_tag="RB2501_05590"
/codon_start=1
/transl_table=11
/product="outer membrane efflux protein"
/protein_id="YP_003194125.1"
/db_xref="GI:260061045"
/db_xref="GeneID:8454817"
/translation="MRLIRIGILALLIARAGYAQEMTPPATQSGTPPLTAQSADQEAE
APVAFSLEEAVAFALEHNYSAINANRDIADAEKQKWETIASGLPQISGAVSYQDQLKQ
PISLIPAEFFGGEPGTFEEIVFGPPRTMSATATLRQQIFDGSYIVGIQATRAFLSYSQ
NNREKTEQEVRRAVVESYGNVLLARESVELLEKDIAAVDKNLFETEKLYENGLAEEED
VEQLQITSATLHNNLSSNQRLAEITLQMLNVTMGLPLDHPTRLTQDLDELVEQETRPE
LLESGFILENNVDYKLAQNLNEQRFYELKLARSRALPTLNAFINYGRTGFGDPLAYFD
GDTQSFQSSILGFDLSIPIFSSLGRSASTQRAKIALEKAKTQLEETEQQLELQLKQAR
SDYTLAIETFQTSKANLALAERIERKNTIKYSEGLASSFELRQAQTQLYSAQREYLQS
MVDVINRKTALENILNP"
misc_feature 504382..505728
/locus_tag="RB2501_05590"
/note="Outer membrane protein [Cell envelope biogenesis,
outer membrane / Intracellular trafficking and secretion];
Region: TolC; COG1538"
/db_xref="CDD:31727"
gene 505734..506990
/locus_tag="RB2501_05595"
/db_xref="GeneID:8454818"
CDS 505734..506990
/locus_tag="RB2501_05595"
/codon_start=1
/transl_table=11
/product="RND family efflux transporter MFP subunit"
/protein_id="YP_003194126.1"
/db_xref="GI:260061046"
/db_xref="GeneID:8454818"
/translation="MNRMLPIQTKIPIQTKILISTTINHTPMKNILLLTFALLALSGC
GSSPDSDLDTLLANGDLEAIKARRQELSETEKNLKASLRQIDSVIASLEGNANRPLVS
TMQLQPARFDHYLELQGDVQTKQNVLLYPEMAGTLERVLVEDGDQVRKGQVLARIDDG
GLSSGLEQLRTQAALAETTYERQKRLWDQNIGSEIQYLQAKTEFESLTNQIRQAEAQL
AKSAIRAPFSGIVDDVLLEAGTTVNPAAGMPVIRLVNLSDMYVEVDVPESYLPSVRPG
KDVMIFLPVLGDSIRTKVRQTGNYINPTNRSFSVEIPVPNRDGKIKPNLTARVSINDY
SAEAAILVPPSVISENAEGQQYVYLAEDIDAEGVGTAVKRLVETGLSQGDQVEILSGI
EAGDQIITEGARRVREGQKIQILNKA"
misc_feature 506034..506975
/locus_tag="RB2501_05595"
/note="RND family efflux transporter, MFP subunit; Region:
RND_mfp; TIGR01730"
/db_xref="CDD:162505"
misc_feature 506106..506255
/locus_tag="RB2501_05595"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature 506400..506702
/locus_tag="RB2501_05595"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene 506987..510493
/locus_tag="RB2501_05600"
/db_xref="GeneID:8454819"
CDS 506987..510493
/locus_tag="RB2501_05600"
/codon_start=1
/transl_table=11
/product="AcrB/AcrD/AcrF family protein"
/protein_id="YP_003194127.1"
/db_xref="GI:260061047"
/db_xref="GeneID:8454819"
/translation="MSRQKKNADKEFWLSSWAIDNPSVIYVMIGIFLVMGISAYQNMP
REDFPEVEETKVYISTPYPGNTAEDIERLITDPLEDRLKNVSNLVELTSTSQEDYSMI
VVEFDENISVQDAKLKVEDEVDAEKAGEDWPIFNGAKVEPNVFDLNLAESFPIMNVNL
TGDYPVEQLKEFAEYLQDEIEDLDEIKEVDIRGAQDKEVEVAVDIYKMMAAKVSFDDV
LNAIRNGNMTMSAGNLQTNGQRRTVRILGEVEDPDELRNFVVKSENGNAVYIKDVATV
TFHEEDKTTYAREKGRSVVMLDIKKRSGKNTIEAANKIRDLVQEAREDYFPRDLNVTI
ANDSSSRTLNQVDDLVNNIIFGILLVVTVLMFFLGFRNALFVGFAIPMSMFMSFMILS
WLGYSLNTMILFGLIMGLGMLVDNGVVVVENVYRLMDEEGMSRLEAAKKGIGEIAVPI
IISTATTVAAFVPLGLWPGIMGEFMIFFPITLSVVLGSSLFVAIFMNSMLVSNFMETG
EKELTRKQLVRLSLILIPLGIFILIVGGAMRGLGSLMIVTAGLSWLYRYVIKKRANRF
QRVTLRRLENFYEGQLKRALRGRNVYWYAGTMFVLLIAAFMAFGASLASQRTKVEFFP
DNTPNEIYVYIEYPQGTSIEKTNEITKAIEERVYAVVDSDTYMMGDRNVLLESTVSQV
GRGAENPFTEGGTAAEMPHRGKITLSMREYKYREGKDTEELRLRIQQALEGVYPGVEI
SVEKDAVGPPAGYPINVELEGKNYDTLINLAERMRNFINSKNIEGIEELKIDVNKSKP
SMEVIVDREKAGELGVAVGQVGNQLRRSIFGDKAGIYKEDGEDYDINVRFNEDLRYNT
SALFNQNIIFRDPATGQIKEIPVSAVASHRNTSGFSAIKHIDAKRVVTVYSGLTPGFT
DAGAIVSQIQDAMEEFEGVPPNVSIDYTGQLEEQNKQMQFLVGAFFSGLGLIMLLLVF
QFGGISKPAIIMTAIFLSFIGVFGGLIITGWSFVIMMTMMGIISLAGIVVNNGVVLLD
YTQILIDRKKVKLGLDDRELLTLPQVTEAIVRGGKARLRPVLLTAITTVLGLIPLAIG
LNINFFGLFSSFQPDIYMGGDNVIFWGPLAWTVIFGLIVATFLTLIIVPVLFNITYRI
KLAVRKRRPKSEEEARRLQEAA"
misc_feature 507023..510424
/locus_tag="RB2501_05600"
/note="Cation/multidrug efflux pump [Defense mechanisms];
Region: AcrB; COG0841"
/db_xref="CDD:31183"
gene 510591..512342
/gene="aspS"
/locus_tag="RB2501_05605"
/db_xref="GeneID:8454820"
CDS 510591..512342
/gene="aspS"
/locus_tag="RB2501_05605"
/note="catalyzes a two-step reaction, first charging an
aspartate molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA; contains discriminating
and non-discriminating subtypes"
/codon_start=1
/transl_table=11
/product="aspartyl-tRNA synthetase"
/protein_id="YP_003194128.1"
/db_xref="GI:260061048"
/db_xref="GeneID:8454820"
/translation="MYRSHTCGELREEHIGREVTLAGWAGKVRDKGFVVWIDLRDRYG
ITQLVFDQERTPAALLDQARETGREYVLQVKGNVIERASKNPKLPTGGIEVLVEEMTV
LNPAETPPFTIEDQTDGGDELRMKYRYLDIRRNPVKNKLMFRHTVTMEVRKYLSDQGF
IEVETPYLIKSTPEGARDFVVPSRMNAGEFYALPQSPQTFKQLLMVGGLDKYFQIVKC
FRDEDLRADRQPEFTQIDCEMAFVEQEDILRAFEGLTRHLLKAVNGVDTGEFPRMTYD
EAIRRYGSDKPDIRFGMEFGELNEVARHRDFNVFNQAELVVGIAVPGAASYTRKEIDA
LVDWVKRPQVGAKGMVYVKCNDDGSFKSSVDKFYSQEDLARWAEATGATPGDLICVLS
GDAGTTRSQLSMLRMELAGRLGLRNPKEFAPLWVTDFPLLEFDEESGRYHAMHHPFTA
PKPGQLELLDSDPGAVRANAYDLVLNGNEIGGGSIRIHDKKTQAVMFRHLGFTEAEAR
AQFGFLMDAFQYGAPPHGGIAFGLDRLVAILGGQESIRDYIAFPKNNSGRDVMIDAPA
PLDAEQLRELHLGLLES"
misc_feature 510591..512324
/gene="aspS"
/locus_tag="RB2501_05605"
/note="aspartyl-tRNA synthetase; Validated; Region: aspS;
PRK00476"
/db_xref="CDD:179042"
misc_feature 510597..510992
/gene="aspS"
/locus_tag="RB2501_05605"
/note="EcAspRS_like_N: N-terminal, anticodon recognition
domain of the type found in Escherichia coli aspartyl-tRNA
synthetase (AspRS), the human mitochondrial (mt) AspRS-2,
the discriminating (D) Thermus thermophilus AspRS-1, and
the nondiscriminating (ND)...; Region: EcAspRS_like_N;
cd04317"
/db_xref="CDD:58587"
misc_feature order(510597..510599,510606..510608,510660..510662,
510714..510716,510900..510902,510906..510911)
/gene="aspS"
/locus_tag="RB2501_05605"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:58587"
misc_feature order(510669..510671,510675..510683,510696..510698,
510729..510731,510789..510791,510831..510833,
510843..510845,510870..510872,510918..510920)
/gene="aspS"
/locus_tag="RB2501_05605"
/note="anticodon binding site; other site"
/db_xref="CDD:58587"
misc_feature 511011..>511439
/gene="aspS"
/locus_tag="RB2501_05605"
/note="Asp tRNA synthetase (aspRS) class II core domain.
Class II assignment is based upon its structure and the
presence of three characteristic sequence motifs. AspRS is
a homodimer, which attaches a specific amino acid to the
3' OH group of ribose of the...; Region: AspRS_core;
cd00777"
/db_xref="CDD:73228"
misc_feature order(511020..511028,511035..511037,511044..511049,
511056..511058,511065..511076,511080..511100,
511119..511121,511128..511142,511152..511163,
511206..511211,511218..511223,511239..511241,
511251..511253,511281..511283,511311..511313,
511326..511328)
/gene="aspS"
/locus_tag="RB2501_05605"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:73228"
misc_feature 511086..511100
/gene="aspS"
/locus_tag="RB2501_05605"
/note="motif 1; other site"
/db_xref="CDD:73228"
misc_feature order(511110..511118,511176..511178,511182..511184,
511191..511193,511248..511250,511254..511256,
511269..511277,511284..511286,511290..511292)
/gene="aspS"
/locus_tag="RB2501_05605"
/note="active site"
/db_xref="CDD:73228"
misc_feature 511245..511256
/gene="aspS"
/locus_tag="RB2501_05605"
/note="motif 2; other site"
/db_xref="CDD:73228"
misc_feature 511512..511754
/gene="aspS"
/locus_tag="RB2501_05605"
/note="GAD domain; Region: GAD; pfam02938"
/db_xref="CDD:145868"
misc_feature <511851..512258
/gene="aspS"
/locus_tag="RB2501_05605"
/note="Asp tRNA synthetase (aspRS) class II core domain.
Class II assignment is based upon its structure and the
presence of three characteristic sequence motifs. AspRS is
a homodimer, which attaches a specific amino acid to the
3' OH group of ribose of the...; Region: AspRS_core;
cd00777"
/db_xref="CDD:73228"
misc_feature 512181..512192
/gene="aspS"
/locus_tag="RB2501_05605"
/note="motif 3; other site"
/db_xref="CDD:73228"
gene 512438..514222
/locus_tag="RB2501_05610"
/db_xref="GeneID:8454821"
CDS 512438..514222
/locus_tag="RB2501_05610"
/codon_start=1
/transl_table=11
/product="transport related, membrane protein"
/protein_id="YP_003194129.1"
/db_xref="GI:260061049"
/db_xref="GeneID:8454821"
/translation="MGNQPHSLLTRFLKWRYKHISHKTFTHLMSVVLGFLAGLAAVTL
KNATYFIESALDRGVLFLSEEIYFILPIVGLTLVYLYVKYVHKAKLEHAISSILFALS
RKKGLIQAKKIVTPLITAPLTVGFGGSVGLLGPAVASGAAISSNISRMLHISSQERSL
LIACASAGAIASVFQAPIAAIIFAVEVFSLDLTMLSMLPLLLASISGVLTSYFFLGDE
NLFTFELQDSFAVRDSLYYILLGMGTAVASVYFTRMYFGIMKLFQPLRSPKYRLLVGG
LAIGTMLYFIPPLYGEGFGFINSLLEGDHLAALGTTPFDAYTHNIWVVIGLLFGITLF
KAVAMTTTFAAGGAGGIFIPTMVMGGALGNMLAKVINNLGLGLSVSESNFTLIGMAGL
IAGVIHAPLTAIFLIAEITGGYDLFVPLMITAAMSFLITRNTMDHTIYTRELARIGAL
ITHNKDQTVLTLMELDDVIETGFREVRKEMTLGEMLLESVAKSTRNIFPVVDADGKLE
GIVLLDDIREFMFDTAMYDKITVASFLQNPPEKIFYESDSMKQVMKKFQDSGAWNLPV
VRNGKYAGFVSKSKLLTAYRRKLITFAR"
misc_feature 512537..513721
/locus_tag="RB2501_05610"
/note="CLC voltage-gated chloride channel. The ClC
chloride channels catalyse the selective flow of Cl- ions
across cell membranes, thereby regulating electrical
excitation in skeletal muscle and the flow of salt and
water across epithelial barriers. This...; Region:
Voltage_gated_ClC; cd00400"
/db_xref="CDD:79359"
misc_feature 512654..513733
/locus_tag="RB2501_05610"
/note="Voltage gated chloride channel; Region:
Voltage_CLC; pfam00654"
/db_xref="CDD:201375"
misc_feature order(512723..512737,512828..512842,513485..513499)
/locus_tag="RB2501_05610"
/note="Cl- selectivity filter; other site"
/db_xref="CDD:79359"
misc_feature order(512726..512728,512732..512734,512834..512839,
513485..513493)
/locus_tag="RB2501_05610"
/note="Cl- binding residues [ion binding]; other site"
/db_xref="CDD:79359"
misc_feature 512834..512836
/locus_tag="RB2501_05610"
/note="pore gating glutamate residue; other site"
/db_xref="CDD:79359"
misc_feature order(512969..512971,512996..512998,513041..513043,
513062..513064,513629..513631,513638..513640,
513662..513664,513686..513688,513707..513712)
/locus_tag="RB2501_05610"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:79359"
misc_feature 513854..514189
/locus_tag="RB2501_05610"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains in
association with either the SpoIVFB domain (sporulation
protein, stage IV cell wall formation, F locus,
promoter-distal B) or the chloride channel protein EriC;
Region: CBS_pair_SpoIVFB_EriC_assoc2; cd04613"
/db_xref="CDD:73113"
gene 514222..514485
/locus_tag="RB2501_05615"
/db_xref="GeneID:8454822"
CDS 514222..514485
/locus_tag="RB2501_05615"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194130.1"
/db_xref="GI:260061050"
/db_xref="GeneID:8454822"
/translation="MRTLIRYVVLAIVLASLAGIIYGFTRMEEAPQQANKFIGFGVVG
LFLLAMPLFLVSESRGKNMKDYMLTDQKIREMRENRKKSPENQ"
misc_feature 514234..>514377
/locus_tag="RB2501_05615"
/note="Heme/copper-type cytochrome/quinol oxidases,
subunit 1 [Energy production and conversion]; Region:
CyoB; COG0843"
/db_xref="CDD:31185"
gene 514574..514768
/locus_tag="RB2501_05620"
/db_xref="GeneID:8454823"
CDS 514574..514768
/locus_tag="RB2501_05620"
/codon_start=1
/transl_table=11
/product="cold shock protein"
/protein_id="YP_003194131.1"
/db_xref="GI:260061051"
/db_xref="GeneID:8454823"
/translation="MTGTVKFFNESKGYGFITNDDTGRDIFVHATALDGLVLNQGDKV
EYQETEGRKGMVAADVHVIG"
misc_feature 514574..514759
/locus_tag="RB2501_05620"
/note="Cold-Shock Protein (CSP) contains an S1-like
cold-shock domain (CSD) that is found in eukaryotes,
prokaryotes, and archaea. CSP's include the major
cold-shock proteins CspA and CspB in bacteria and the
eukaryotic gene regulatory factor Y-box protein; Region:
CSP_CDS; cd04458"
/db_xref="CDD:88424"
misc_feature order(514592..514594,514619..514621,514652..514654,
514730..514732)
/locus_tag="RB2501_05620"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:88424"
misc_feature order(514610..514630,514649..514660)
/locus_tag="RB2501_05620"
/note="RNA-binding motif; other site"
/db_xref="CDD:88424"
gene complement(514843..515292)
/locus_tag="RB2501_05625"
/db_xref="GeneID:8454824"
CDS complement(514843..515292)
/locus_tag="RB2501_05625"
/codon_start=1
/transl_table=11
/product="cytosine/adenosine deaminase"
/protein_id="YP_003194132.1"
/db_xref="GI:260061052"
/db_xref="GeneID:8454824"
/translation="MELILDDAFFMRKALQEAEAAFDLGEVPVGAVITVRDRVIARAH
NLTEKLNDVTAHAEMQAITAAANFLGGKYLTDCTLYVTLEPCQMCAGALYWSQVSRVV
YGAPDPQRGFTAMGGKLHPRTLVTPGILEAEAAALLKRFFIERRNLN"
misc_feature complement(514948..515262)
/locus_tag="RB2501_05625"
/note="Nucleoside deaminases include adenosine, guanine
and cytosine deaminases. These enzymes are Zn dependent
and catalyze the deamination of nucleosides. The zinc ion
in the active site plays a central role in the proposed
catalytic mechanism, activating a...; Region:
nucleoside_deaminase; cd01285"
/db_xref="CDD:29828"
misc_feature complement(order(515026..515028,515035..515037,
515119..515127,515158..515160,515206..515208))
/locus_tag="RB2501_05625"
/note="nucleoside/Zn binding site; other site"
/db_xref="CDD:29828"
misc_feature complement(order(515005..515010,515017..515022,
515029..515034,515104..515106,515116..515118,
515131..515133))
/locus_tag="RB2501_05625"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29828"
misc_feature complement(order(515026..515028,515035..515040,
515119..515127))
/locus_tag="RB2501_05625"
/note="catalytic motif [active]"
/db_xref="CDD:29828"
gene 515391..517163
/locus_tag="RB2501_05630"
/db_xref="GeneID:8454825"
CDS 515391..517163
/locus_tag="RB2501_05630"
/codon_start=1
/transl_table=11
/product="1-deoxy-D-xylulose-5-phosphate synthase"
/protein_id="YP_003194133.1"
/db_xref="GI:260061053"
/db_xref="GeneID:8454825"
/translation="MQILEQINDPADLRALPEDRLPQLAAELREFIIDVVSVKEGHLG
ASLGVVELTLALHYVFNTPEDRLIWDVGHQAYGHKILTGRRESFHTNRQQGGISGFPK
RDESPYDAFGTGHASTSLSALLGMALAARLQGKIARKHVAVIGDASIAGGMAFEALNH
MGVADTDVLVVLNDNAIGIDPSVGALKEYLTRVKAGGAAGDNLFENLNLHYTGPVDGH
DLPGLVATLRKLASRPGPKLLHVVTTKGKGLRQAEENQVVYHAPGRFDKYTGDLIRRE
NDPGRGPKYQDVFGHTLVELARENPRIVGITPAMPSGSSLKYLMEEFPERAFDVGIAE
QHAVTLAAGMAADGAVPYCAIYSTFLQRAYDQVIHDVAIQQLPVVFCLDRAGLVGQDG
ATHHGIFDIAYLRCIPGLVVMSPMDNRELRDMLYTVQLEPRGPVAIRYPRGYSRQASW
KHPFRRIPVGKARKLQQGIAVAVLTLGPLGQTIREVLGETENPEAFGHYDFRFAKPLD
REALREIALAYGQVVTLEDGCREGGFGSAVLEALAEMGYSGKVHRLGIPDAFPGHATT
QELYEELGLDKASLLRTLNNLTHE"
misc_feature 515391..517151
/locus_tag="RB2501_05630"
/note="1-deoxy-D-xylulose-5-phosphate synthase;
Provisional; Region: PRK05444"
/db_xref="CDD:180086"
misc_feature 515511..516137
/locus_tag="RB2501_05630"
/note="Thiamine pyrophosphate (TPP) family, DXS subfamily,
TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate
synthase (DXS) is a regulatory enzyme of the
mevalonate-independent pathway involved in terpenoid
biosynthesis. Terpeniods are plant natural products...;
Region: TPP_DXS; cd02007"
/db_xref="CDD:73294"
misc_feature order(515736..515738,515823..515834,515913..515915,
515919..515921)
/locus_tag="RB2501_05630"
/note="TPP-binding site; other site"
/db_xref="CDD:73294"
misc_feature 516249..516716
/locus_tag="RB2501_05630"
/note="Pyrimidine (PYR) binding domain of
1-deoxy-D-xylulose-5-phosphate synthase (DXS),
transketolase (TK), and related proteins; Region:
TPP_PYR_DXS_TK_like; cd07033"
/db_xref="CDD:132916"
misc_feature order(516291..516293,516297..516299,516315..516317,
516366..516368,516375..516377,516381..516398,
516405..516410,516414..516422,516474..516476,
516483..516488,516561..516563,516570..516572,
516618..516623,516687..516689)
/locus_tag="RB2501_05630"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132916"
misc_feature order(516315..516317,516375..516377,516384..516392,
516471..516476,516480..516482,516561..516563,
516567..516569,516594..516599,516603..516608,
516612..516614)
/locus_tag="RB2501_05630"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132916"
misc_feature order(516384..516386,516390..516392,516465..516467,
516474..516476)
/locus_tag="RB2501_05630"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132916"
misc_feature 516768..517130
/locus_tag="RB2501_05630"
/note="Transketolase, C-terminal domain; Region:
Transketolase_C; pfam02780"
/db_xref="CDD:202391"
gene 517156..518259
/locus_tag="RB2501_05635"
/db_xref="GeneID:8454826"
CDS 517156..518259
/locus_tag="RB2501_05635"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194134.1"
/db_xref="GI:260061054"
/db_xref="GeneID:8454826"
/translation="MSNIGAKTNLVATACLLLSTLAFGQDTIPRTIDSIPTDTLVIRT
NQYPIRIIPRGVNLTNPVITFNETKPLMRRKKRFRVPSFWEKKNEFDLQLSEVAFVNW
NAGGDNAVSAIGKLYFERNYKFRYFQWDNDLELRFGWNAQEGRKWRKTDDAIRLSSTI
GYRRDTISNWYYSVKMNFNTQFADGFKYPDRSKPISRFMAPGYLFLGAGTSYIPEGKD
FNLYISPLTFKGTFVLDQTLANNGAFGVEKAVLDNNGNVLEPGSNLFAELGFLVTHKW
ELPITDNVILNHNLSLYTDYLRVFGNVDVDWQVKFNFKVNEFIQATLLTHLIYDDDIL
FDRVEADDGTVIDPGSPRTQFRQQLGIGINYKF"
misc_feature 517435..517713
/locus_tag="RB2501_05635"
/note="Protein of unknown function (DUF3078); Region:
DUF3078; pfam11276"
/db_xref="CDD:151717"
gene complement(518260..519609)
/locus_tag="RB2501_05640"
/db_xref="GeneID:8454827"
CDS complement(518260..519609)
/locus_tag="RB2501_05640"
/codon_start=1
/transl_table=11
/product="dGTP triphosphohydrolase"
/protein_id="YP_003194135.1"
/db_xref="GI:260061055"
/db_xref="GeneID:8454827"
/translation="MMQWERLLSLKRHGDTHKRLRKEQDETRLGFEVDYDRIIFSPYF
RSLQDKTQVIPLSKTDFVHTRLTHSLEVSVVGRSLGRLAGAEVLKTHPYLSEVHGYRF
NDFGAIVAAAALAHDIGNPPFGHSGEKAIGAFFSRGPGRRYQDALSEDQFEDLVRFEG
NAHGFRLLTASREGIPGGLRLSHATLGAFMKYPKGSLPRKPAPHIAAKKFGYFQSDTD
SFREVAEELGLKTLGSGADRFYCRHPLTYLVEAADDICYTIIDFEDGINLGLIPEDFA
LEYLIKLVSDGINTEKYRAIPAMQDRLGYLRAIAINSLVRDAVRVFMENEPEILSGEF
PVALLDRSRYKAQIADILNISVERIYQSPEVVEKEVAGYAILSDILEVVTGALVCQLE
GELSAYDGLILKLLPETTRMPGATSVYDVLLQACSYVASLSDGAAVHLHNKISGKQL"
misc_feature complement(518272..519606)
/locus_tag="RB2501_05640"
/note="deoxyguanosinetriphosphate triphosphohydrolase-like
protein; Provisional; Region: PRK01096"
/db_xref="CDD:179219"
gene 519848..522607
/locus_tag="RB2501_05645"
/db_xref="GeneID:8454828"
CDS 519848..522607
/locus_tag="RB2501_05645"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_003194136.1"
/db_xref="GI:260061056"
/db_xref="GeneID:8454828"
/translation="MVSAQNTGSIAGVLTDQEMNGEPLPFANILIKGTTTGTTSDFDG
LYEIDGLDPGDYTVVFSFLGYETVEIPATVEAGKVTQINVPMSANEGMALDEVVVTTV
SRKDSEVALLLDQKSAILIRESIGSQQLGRIGVSDAATATTKISGVTASEASGDIFIR
GLGDRYLSTTLNGLPVPSDDVDRKNIDLGLFPTRVIQNVSIGKTYSVQSSADQASGTV
NITSRELVGSNELTIGLRGGANTNVIQDGVFDNFKLSPASAKAPLGYYSFNRSVQQLI
TQQGWNTRTEEAPMDYVLNLVAGKKFGDRLSVLLTGSQSRSYDYGQGLFRQFRSNFID
DTLTDATRWRKREVTSGLLDMVYFINENHKLKSSSIFLNTFTEEIFEGGRNGEGFIFE
ETDPAEGLGQFVRDQNIKQTQILISQLLGTHRLGQKNSLQWALGFNNVNADEPNRIRN
EVNFDPDGSFVQLGRTGGFQQRKSSQEIQDREYNGYLKDVMDIIQEEDKSFRIEVGVN
YRNKERDFESVFVGVEEQSVNTVNPPSIDNIGAIFQPDNFTSGRLQYNLLQPDLYNGK
LESMAGFADFNVGLNKWNFNAGLRFQRDEINVGFDVGNFPGRVGETNKEYSNLYPSLN
VRYSIDDRNALRLAMSRTITLPEFKEIAPFEYVSQVGQVTRGNPDLEASRDLNYDLKW
EYFPSAGELISLAAFYKEISDPINRVQDRGSAGVFSYFNSGEKAEVIGIEAEAKVDLI
TAPENEEGLREGSGLGLVFNATRMWHEQDLKEVRDEEGNFIRTFRYKGLTETGLQGAS
DWIFNASLNYSLEGANPFNATLTANYASDKIFSLGAPEIQSQSDTFYNDAIVEKGFVV
LDAVLIQELGEHWRIRLMGRNLLTPTIERTQLVRPSTTNIETEEVVRSYTSGAQISLG
LNYTF"
misc_feature 519872..520144
/locus_tag="RB2501_05645"
/note="Cna protein B-type domain; Region: Cna_B_2;
pfam13715"
/db_xref="CDD:205890"
misc_feature 520127..522604
/locus_tag="RB2501_05645"
/note="TonB-dependent receptor; Region: TonB-Xanth-Caul;
TIGR01782"
/db_xref="CDD:162534"
misc_feature 520214..>520969
/locus_tag="RB2501_05645"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
misc_feature <521534..522604
/locus_tag="RB2501_05645"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene 522691..524688
/locus_tag="RB2501_05650"
/db_xref="GeneID:8454829"
CDS 522691..524688
/locus_tag="RB2501_05650"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194137.1"
/db_xref="GI:260061057"
/db_xref="GeneID:8454829"
/translation="MTMVFALMLASCSSDDGGTDPPVQATCSDGIQNGDETGIDCGGS
CTACVVEEDANLSGSQEEDRTLDPTVAYTLTGTYSVESGVTLTIPAGTVITSQTGTDK
YIVVQKGGQIDIQGTAANPVIMTSTGQNPGDWGGLVIAGNATTTEGVDAIAEVGGIVY
GGTDDADSSGSISYLIINYAGAQINSESQYNGLSLYAVGSGTSIDNVAILNGTDDGVE
FFGGTVSASNFYLENNEDDAVDWTEGWNGTLTNTLVLHTIAGFSTAVEADGINGNPTL
ANFTAVSTTGGTALQFKKESGATITGLSLTGYEVSVDMRDGGPLANVQIDGAAADPAE
TYLADPTVEATAFAWVDTDVSVETQDLEGSMTTDMTLDASVIYRLRGSFSVDAGTLTI
PAGTRIIADAEQGAATETYIVVKKGAMIDIQGTAEAPVVMTSSSQQPGDWGGLVILGD
ATTSEGVDAIAEVGGFVYGGTNDTDNSGSIEYLVINYAGAQINSESQYNGLSLYAVGS
GTTINNVAILNGTDDGVEFFGGTVSASNFYLANNEDDAVDWTEGWNGTLTNTLVVHDI
EGFSTAVEADGVDAGVAVPTLENFTAVSSTGGTALQFKKTTGAIITNILLDGYTVNVD
MRDSGPVGNIEVDGTAMTTVDDDVFGGTGVDTSVFAWFTGE"
gene 524952..527210
/locus_tag="RB2501_05655"
/db_xref="GeneID:8454830"
CDS 524952..527210
/locus_tag="RB2501_05655"
/codon_start=1
/transl_table=11
/product="phosphate sodium symporter"
/protein_id="YP_003194138.1"
/db_xref="GI:260061058"
/db_xref="GeneID:8454830"
/translation="MGDDLYLYMIIALAILAISDLVVGVSNDAVNFLNSALGSKAISF
RTIMIVASIGIAFGAMSSSGMMEVARKGIFVPGEFMFSEIMIIFMAVMITDVLLLDFF
NTLGMPTSTTVSIVFELLGAAVITSLIKMSAADESFLNLGNYINNDKAIEIILGIVLS
VLIAFTIGALIQFLSRLFLTFEFQKKATWKASVFGGLAIAGIVYFILIKGLSSTNLFN
GLVIDFVEQNTLLFLVGNAIVWSLVCGLLQSLAKLNIYQIIIVFGTFALAMAFAGNDL
VNFIGVPIAAYQSFLDWSASGVGADNYAMDGLAAAVQTPTLLLLLSGVVMILTLWFST
KALFVTETEINLAREGEGEERFRPNYLSRQIVRLTVAAVETISSLPPEKVQAAISRRF
ERAPSYTSRVQAKEKPAFDMVRASVNLMVASVLISIATSMKLPLSTTYVTFMVAMGTS
LADRAWGSESAVYRVAGVLNVIGGWFLTAITAFTGAGIVAYLIYLGGAWAIGLLFVLA
LVILIRNYLNHKKRSRELKEEYVLRRTESSTISEVIEDSADNVAVAIKRVNKIYTSSM
EGLVKHDLNSLKKSTKHIRKLDTEVENLRESIFYFIKNLDEGSVKASNLYLQILRYLQ
DMTQSLEHISKSSYKHVNNNHKKLRFQQLRDLKETDSFVSGFFKEVQEIFSEGNFEEL
TQTLIRQEELLQRVDAKIRKQIERTRGDESSPKNTALYFNLLQETRDLLEATFKLMEI
YDVNINKIELEL"
misc_feature 525027..>525488
/locus_tag="RB2501_05655"
/note="Phosphate transporter family; Region: PHO4;
pfam01384"
/db_xref="CDD:201762"
misc_feature <526206..>526502
/locus_tag="RB2501_05655"
/note="Phosphate transporter family; Region: PHO4;
cl00396"
/db_xref="CDD:207031"
gene complement(527340..527669)
/locus_tag="RB2501_05660"
/db_xref="GeneID:8454831"
CDS complement(527340..527669)
/locus_tag="RB2501_05660"
/codon_start=1
/transl_table=11
/product="nicotinic acid mononucleotide adenyltransferase"
/protein_id="YP_003194139.1"
/db_xref="GI:260061059"
/db_xref="GeneID:8454831"
/translation="MLICGVISIEAQQPEPQFERTDDLVKATYYHENGAVAQTGFFRD
GQLHGEWIMFDTSGKKVAIGQYDAGNKTGKWFFWEEDNLREVDYSDNAIVNVVNWNNG
TRVAVNR"
misc_feature complement(527364..>527582)
/locus_tag="RB2501_05660"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG2849"
/db_xref="CDD:32677"
gene 527959..528690
/locus_tag="RB2501_05665"
/db_xref="GeneID:8454832"
CDS 527959..528690
/locus_tag="RB2501_05665"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194140.1"
/db_xref="GI:260061060"
/db_xref="GeneID:8454832"
/translation="MGYLQFFCLYVLVLLSPPALESQQITAPELLEKSIAYHDPQGQW
GRLRADFEILAERPGGSDRLSTIHMDQAASLFRVRVEQEGVTKTYQVHGGHCRLWYQG
EAGFPEETAASENLTCERASLLRDYYSYLYGLPMKLRDPGTVMEPEVNRADFHGKEYL
VIEVRYEPGTGSDTWRFYFDPVTSALGAYQFFHDVAANDGEYILLEGEAAIGTMRVPE
FRKWYRNDTGEYLGSDRLRPAGSRE"
misc_feature <528490..528603
/locus_tag="RB2501_05665"
/note="adenylate kinase; Provisional; Region: PRK14529"
/db_xref="CDD:237746"
gene 528874..529299
/locus_tag="RB2501_05670"
/db_xref="GeneID:8454833"
CDS 528874..529299
/locus_tag="RB2501_05670"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194141.1"
/db_xref="GI:260061061"
/db_xref="GeneID:8454833"
/translation="MTGTELETTFLAEHRLAIGTFRFYHNLVIGRIDEGQQVTLDSAL
PVIAIGIEFYNRKRPAVYLSDRQHSYSMDPTLHLEAHKLFPFLLGYGVVAYNDINRRV
AELEQQFVPCPSGIFDSMDAGLAWAMQLIGEQEKSRPHR"
gene complement(529374..529958)
/gene="nadD"
/locus_tag="RB2501_05675"
/db_xref="GeneID:8454834"
CDS complement(529374..529958)
/gene="nadD"
/locus_tag="RB2501_05675"
/note="transfers an adenyl group from ATP to NaMN to form
nicotinic acid adenine dinucleotide (NaAD) which is then
converted to the ubiquitous compound NAD by NAD
synthetase; essential enzyme in bacteria"
/codon_start=1
/transl_table=11
/product="nicotinic acid mononucleotide
adenylyltransferase"
/protein_id="YP_003194142.1"
/db_xref="GI:260061062"
/db_xref="GeneID:8454834"
/translation="MKKTGLFFGTFNPIHIGHLIIANHLAEFSDLDQVWFVVTPRSPF
KKKDSLLDDYHRFQMVYEAVREYPRLEVCDAEFKLPQPNYTIDTLTHLREKHGDSRQF
SLIMGEDNLKGLHKWKNYEAILDYYSIYVYPRLGPGDIPEALRDHPAISRVDAPVMEL
SATFIRKQHAAGKNVRPLLPEAVWKYMDEMNFYR"
misc_feature complement(529377..529958)
/gene="nadD"
/locus_tag="RB2501_05675"
/note="nicotinic acid mononucleotide adenylyltransferase;
Provisional; Region: nadD; PRK00071"
/db_xref="CDD:178839"
misc_feature complement(529380..529949)
/gene="nadD"
/locus_tag="RB2501_05675"
/note="Nicotinamide/nicotinate mononucleotide
adenylyltransferase; Region: NMNAT; cd02165"
/db_xref="CDD:185680"
misc_feature complement(order(529479..529481,529557..529562,
529605..529610,529629..529634,529638..529643,
529647..529649,529704..529712,529833..529835,
529896..529898,529905..529910,529914..529916,
529926..529940))
/gene="nadD"
/locus_tag="RB2501_05675"
/note="active site"
/db_xref="CDD:185680"
misc_feature complement(529905..529916)
/gene="nadD"
/locus_tag="RB2501_05675"
/note="(T/H)XGH motif; other site"
/db_xref="CDD:185680"
gene complement(529977..530627)
/gene="gmk"
/locus_tag="RB2501_05680"
/db_xref="GeneID:8454835"
CDS complement(529977..530627)
/gene="gmk"
/locus_tag="RB2501_05680"
/note="Essential for recycling GMP and indirectly, cGMP"
/codon_start=1
/transl_table=11
/product="guanylate kinase"
/protein_id="YP_003194143.1"
/db_xref="GI:260061063"
/db_xref="GeneID:8454835"
/translation="MAGGKLIVFSAPSGSGKTTIVRHLLEQPNLNLAFSVSATSRPRR
PKEKHGEHYYFMTVSEFKQHIKNGDFLEWEEVYRDNFYGTLKSEVERLWAEGKNVIFD
IDVAGGLRIKKKFPDQTLAVFVKPPSVDELKIRLKKRSTESDEKINMRIAKASVELAT
APQFDRIIKNYDLEVALKEARDLVAGYVGEAEPGENRAKTRDLDAGGNGTDAKNPS"
misc_feature complement(530076..530627)
/gene="gmk"
/locus_tag="RB2501_05680"
/note="Guanylate kinase [Nucleotide transport and
metabolism]; Region: Gmk; COG0194"
/db_xref="CDD:30543"
misc_feature complement(530247..530612)
/gene="gmk"
/locus_tag="RB2501_05680"
/note="Guanosine monophosphate kinase (GMPK, EC 2.7.4.8),
also known as guanylate kinase (GKase), catalyzes the
reversible phosphoryl transfer from adenosine triphosphate
(ATP) to guanosine monophosphate (GMP) to yield adenosine
diphosphate (ADP) and guanosine...; Region: GMPK; cd00071"
/db_xref="CDD:73180"
misc_feature complement(order(530382..530384,530400..530402,
530469..530471,530496..530498,530505..530507,
530526..530528,530577..530579,530595..530597))
/gene="gmk"
/locus_tag="RB2501_05680"
/note="catalytic site [active]"
/db_xref="CDD:73180"
misc_feature complement(order(530577..530579,530595..530597))
/gene="gmk"
/locus_tag="RB2501_05680"
/note="G-X2-G-X-G-K; other site"
/db_xref="CDD:73180"
gene complement(530627..531484)
/locus_tag="RB2501_05685"
/db_xref="GeneID:8454836"
CDS complement(530627..531484)
/locus_tag="RB2501_05685"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194144.1"
/db_xref="GI:260061064"
/db_xref="GeneID:8454836"
/translation="MIHSMTGFGKHVIQSPGKKITVELKSLNSKNLDINARVPQAYRE
KELVFRNRIARELERGKVDFSLYVELTGDQPSAEINGAIVKKYMEQLGELAEGDSQSF
LAMALRLPDALRTEREEIDPEEFAAIEAALQQALSALKEFRRDEGKALENDFRQRIEA
ILSHLDAVDKRDTDRLAAVRERLQRAVAEIRENVDENRFEQELIYYLEKYDITEEKVR
LAKHLEYFRQSLDSADSNGKKLGFICQEIGREINTIGSKANDAPMQRIVVQMKDELEK
VKEQILNVL"
misc_feature complement(530633..531484)
/locus_tag="RB2501_05685"
/note="hypothetical protein; Provisional; Region:
PRK11820"
/db_xref="CDD:183325"
misc_feature complement(531026..531481)
/locus_tag="RB2501_05685"
/note="YicC-like family, N-terminal region; Region:
YicC_N; pfam03755"
/db_xref="CDD:146410"
misc_feature complement(530633..530887)
/locus_tag="RB2501_05685"
/note="Domain of unknown function (DUF1732); Region:
DUF1732; pfam08340"
/db_xref="CDD:149411"
gene complement(531598..532413)
/locus_tag="RB2501_05690"
/db_xref="GeneID:8454837"
CDS complement(531598..532413)
/locus_tag="RB2501_05690"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194145.1"
/db_xref="GI:260061065"
/db_xref="GeneID:8454837"
/translation="MKKLLTGLAGMALLGACQQQPEQSTEPETAGGPEPIVHEEYQGE
EPTEPEATEVYEPVPPKVDPYGQNGAPSDAIVLFDGGGFDQWQMVSDSSEVKWHLNDD
GSMTVADKTGDIRTKQEFGDIQLHLEWRSPADVQRDGQNRGNSGVFLNGLYEVQVLDN
NDNDTYVNGQVASVYKQHIPLAMASVPSGEWNTYDIIYHMPEFNEAGEKIRSGTLTVI
HNGVLVQDHVELKGTTPYIGWPDNPAHGKGPLILQDHGDNSRVSYRNIWVREL"
misc_feature complement(531607..532197)
/locus_tag="RB2501_05690"
/note="Domain of Unknown Function (DUF1080); Region:
DUF1080; pfam06439"
/db_xref="CDD:203451"
gene complement(532416..533168)
/locus_tag="RB2501_05695"
/db_xref="GeneID:8454838"
CDS complement(532416..533168)
/locus_tag="RB2501_05695"
/codon_start=1
/transl_table=11
/product="secreted glycosyl hydrolase"
/protein_id="YP_003194146.1"
/db_xref="GI:260061066"
/db_xref="GeneID:8454838"
/translation="MRKLTLLACCFFAVIACKENKETPSEEVAESAETATPENEASDW
IVLFDGTSFDGWKGYNQEGVPDTWSIEEGAMVFTPPAERPEGASYNLVTESKFENFVL
SLEWQISEGGNSGVFWGVEELEQFGQPYQTGPEIQVLDNEKHPDAKAGTTHQAGALYD
MIAPSEDVTRPVGEWNTMEITIDYAGETGKVVMNGTELLTFPLGNDAWDAMVADSKFD
GWEGFGQYHEGKIGLQDHGDRVAFRNIKIKPL"
misc_feature complement(532425..533042)
/locus_tag="RB2501_05695"
/note="Domain of Unknown Function (DUF1080); Region:
DUF1080; pfam06439"
/db_xref="CDD:203451"
gene complement(533202..534254)
/locus_tag="RB2501_05700"
/db_xref="GeneID:8454839"
CDS complement(533202..534254)
/locus_tag="RB2501_05700"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194147.1"
/db_xref="GI:260061067"
/db_xref="GeneID:8454839"
/translation="MKTIKGPAVFLAQFVDDKAPFNSLDGMCKWASDLGYKGIQIPTW
EHFLIDLDKAAESQDYCDELKGKVQSYGLEITELSTHLQGQLVAVHPAYDLMFDNFAP
DAVKNNPKARTEWAVDVVKKAATASRRLGIKAHATFSGALLWHTFHPWPQRPPGLVEM
GFEELAKRWKPILDHFDKEGVDVCYEIHPGEDLHDGDTFERFLEATGNHPRVNILYDP
SHFVLQQLDYIEYIDHYHEFIRSFHVKDSEFNPTGKKGAFGGYNDWGDRAGRYRSLGD
GQIDFKTIFSKLTQYGCDVWAVMEWECCIKSPEQGAREGAKFIQDHIIEATEKTFDDF
AGGEIDKEMLRKILGQ"
misc_feature complement(533280..534197)
/locus_tag="RB2501_05700"
/note="Sugar phosphate isomerases/epimerases [Carbohydrate
transport and metabolism]; Region: IolE; COG1082"
/db_xref="CDD:31279"
misc_feature complement(533373..>533936)
/locus_tag="RB2501_05700"
/note="AP endonuclease family 2; These endonucleases play
a role in DNA repair. Cleave phosphodiester bonds at
apurinic or apyrimidinic sites; the alignment also
contains hexulose-6-phosphate isomerases, enzymes that
catalyze the epimerization of...; Region: AP2Ec; cl12060"
/db_xref="CDD:187176"
misc_feature complement(order(533442..533444,533466..533468,
533526..533528,533595..533597,533604..533606,
533697..533699,533841..533843))
/locus_tag="RB2501_05700"
/note="Metal-binding active site; metal-binding site"
/db_xref="CDD:28903"
misc_feature complement(533253..533417)
/locus_tag="RB2501_05700"
/note="AP endonuclease family 2 C terminus; Region:
AP_endonuc_2_N; pfam07582"
/db_xref="CDD:191792"
gene 534478..536184
/locus_tag="RB2501_05705"
/db_xref="GeneID:8454840"
CDS 534478..536184
/locus_tag="RB2501_05705"
/codon_start=1
/transl_table=11
/product="GMC family oxidoreductase"
/protein_id="YP_003194148.1"
/db_xref="GI:260061068"
/db_xref="GeneID:8454840"
/translation="MSKPSGEYDAIVVGTGITGGWAAKELCEKGLKTLVLERGKMVKH
IEDYPTANLDDWDLPYGNQMDRKRQRQYHKQLRVGWAPRPDVAHFFVNDLEHPYQETK
RFDWIRGYQVGGRSLTWGRQSYRWSDVDFEANKKDGIAVDWPVRYKDIAPWYDKVESY
IGVSGEALGLPHLPDGKFQPPMGLNCPEEDLKKAVSGSFSDGRVLTVGRAAHITDPNA
VPEGRNPCQFRDRCWRGCPFGGYFSSNSSTLPAAERTGNMTLMPLAIVHEVIVDEATG
RATGVKVIDTETHEQLTFNAKVIFLCASAMATVGILMKSRSSRFPDGIGNNHDQLGRN
IMDHHYQLGARASVEGHLDKYYKGRRPNGFYIPRFVNLGRDSEKKDYLRGFGYQGSAS
RGDWTESVAEMGYGAGLKDSIMKPGKWTIGATGFGEMLPYHDNRVRLSETEKDQWGLP
QLDFDVEFKENEYRMREDILRQIVAMFEAAGFKDIETYERETGPGLGIHEMGGARMGH
DPKTSVVNRHNQVHDVPNIYVTDGAFMTSASCVNPSLTYMAFTARAAHHAAEQFKAGA
FS"
misc_feature 534478..536121
/locus_tag="RB2501_05705"
/note="Choline dehydrogenase and related flavoproteins
[Amino acid transport and metabolism]; Region: BetA;
COG2303"
/db_xref="CDD:32458"
misc_feature 534496..>534591
/locus_tag="RB2501_05705"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 535768..536121
/locus_tag="RB2501_05705"
/note="GMC oxidoreductase; Region: GMC_oxred_C; pfam05199"
/db_xref="CDD:203202"
gene 536199..536663
/locus_tag="RB2501_05710"
/db_xref="GeneID:8454841"
CDS 536199..536663
/locus_tag="RB2501_05710"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194149.1"
/db_xref="GI:260061069"
/db_xref="GeneID:8454841"
/translation="MKNTSAKRLWGDYLDRHLEYAFTGEPKVRPLGRDADQANRNLQL
VLKGKKRSYSHALLGLQHRGETLPRIGDFTVLTDWEGQARCIVRTVAVRLKPFFSISS
SYAKLEGEGDGSLEQWKKSHWEAFARELEPFGRVPRESMIVVCEVFEKVYEG"
misc_feature 536292..536654
/locus_tag="RB2501_05710"
/note="ASC-1 homology domain, subfamily similar to
Enterococcus faecalis Ef3133. The ASCH domain, a small
beta-barrel domain found in all three kingdoms of life,
resembles the RNA-binding PUA domain and may also interact
with RNA. ASCH has been proposed to...; Region:
ASCH_Ef3133_like; cd06553"
/db_xref="CDD:119345"
gene 536748..536810
/locus_tag="RB2501_05715"
/db_xref="GeneID:8454842"
CDS 536748..536810
/locus_tag="RB2501_05715"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194150.1"
/db_xref="GI:260061070"
/db_xref="GeneID:8454842"
/translation="MLLRYFLPSLPFTYKPESLV"
gene complement(536930..538066)
/locus_tag="RB2501_05720"
/db_xref="GeneID:8454843"
CDS complement(536930..538066)
/locus_tag="RB2501_05720"
/codon_start=1
/transl_table=11
/product="Gfo/Idh/MocA family oxidoreductase"
/protein_id="YP_003194151.1"
/db_xref="GI:260061071"
/db_xref="GeneID:8454843"
/translation="MPEKIKLGILGGGGDSLIGVLHRVAAHMYDSYEITGAVFNPDHA
QSLEFARELGISTDRIYPDFDTLIAEETKLPESERIQVCSIQTPNFLHYPMAKKLLEN
GFHVICEKPMTTTYEEAKTLRDLHEKSGKVFTVTHTYTGYPMVRQMREMIKAGALGKI
HKVDARYYQGWINPIIHDKEKRNSVWRLDPKKAGISSCMGDIGVHAFNMVEFTTGLKI
KSLLCDFNYLYDDNVMDVDGTVLIRMDDHVKGVIRASQVATGEENGLAITIYGEKAGF
RWEQERPNFLYLLSDTEPVRVYKPGHAYNSELSLDGTKLPAGHPEGIFDAMGNIYRGV
AKAIRGQKYNDGEFPTMTDGVRGLNFVEATVASHKSGNTWVDLD"
misc_feature complement(536933..538003)
/locus_tag="RB2501_05720"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature complement(537656..538003)
/locus_tag="RB2501_05720"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature complement(<537437..537622)
/locus_tag="RB2501_05720"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; cl11611"
/db_xref="CDD:209369"
gene complement(538088..539347)
/locus_tag="RB2501_05725"
/db_xref="GeneID:8454844"
CDS complement(538088..539347)
/locus_tag="RB2501_05725"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194152.1"
/db_xref="GI:260061072"
/db_xref="GeneID:8454844"
/translation="MKPINRNRVFLAACISLVVTSMTFAIRAGILDQLGLQFDLSDTQ
LGYINGMAFLGFPIATIVGGLLYNLLGPKKLMMIAFFSHIIGLVMTIYAGGFWTLLIS
TFFIGFANGSVEAACNPMIADMYTRNRTAMLNRFHVWFPGGIVIGALISKFMTDFGMG
WQAQIAIMLIPTLIYGFMFFKEPLPESEHMETDTRLNIKALASPLFLFIIVCMTLTAI
SEFGPQQWVERILGNSGANPMLVLAMVTGIMALGRYFGGFLVHRLNPIGVLLMSAIVT
TAAVYSMSIAEGGMIYAAAILFALGVCYFWPTMIGFTSEYMPKTGALGMSLVGGAGML
STAIWQPVIGSWLDSARQTALDSGMAQEVAELAAGKATLGKMMFFPLTVAVLFGILFL
FFRKKLEERRVPQAHDMADVLEQTKGS"
misc_feature complement(538301..539320)
/locus_tag="RB2501_05725"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(538334..539311)
/locus_tag="RB2501_05725"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature complement(order(538340..538342,538349..538354,
538361..538366,538373..538378,538409..538414,
538424..538426,538433..538438,538445..538447,
538589..538591,538601..538603,538610..538612,
538622..538624,538634..538636,538679..538681,
538688..538693,538700..538705,538712..538714,
538916..538918,538934..538939,538946..538951,
538982..538984,538991..538996,539003..539008,
539015..539020,539156..539161,539165..539170,
539180..539182,539189..539194,539201..539203,
539252..539257,539261..539269,539276..539278))
/locus_tag="RB2501_05725"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(539391..540563)
/locus_tag="RB2501_05730"
/db_xref="GeneID:8454845"
CDS complement(539391..540563)
/locus_tag="RB2501_05730"
/codon_start=1
/transl_table=11
/product="nucleoside permease"
/protein_id="YP_003194153.1"
/db_xref="GI:260061073"
/db_xref="GeneID:8454845"
/translation="MFLEFFVWGSWFVTMGTYLGRSLNTDAAAVGTAYMTQSWGAIVA
PFIVGLIADRFFAAQRMLGVIHIAGAVLMYFIGSTQEFAVFYPLLLVYMVLYMPTLAL
ANSVAFNQLSDPSKQFARIRIWGTIGWIVAGMLIGYVFHWEAENLLGYTFMLASGSSL
ALGLFSFTLPDTPPKSKGDRITLSDVLGLEALSLLKSRNYLIFFLSSVLICIPLAFYY
SFANPFLNEIGMDNAAGNMTFGQISEVIFLLLLPVFLNRFGLKWTLIVGMLAWGVRYT
LFAYGNADEGAWMLFAGIVLHGICYDFFFVSGQIYTDVKAGPRIRSAAQGLITLATYG
VGMLIGYQVCGSIVDAFATADGHAWREIWLYPAGFSYVVLLVFILFFRNEKVSYKL"
misc_feature complement(539418..540563)
/locus_tag="RB2501_05730"
/note="Nucleoside H+ symporter; Region: Nuc_H_symport;
pfam03825"
/db_xref="CDD:112629"
misc_feature complement(<539418..539855)
/locus_tag="RB2501_05730"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(540609..541052)
/locus_tag="RB2501_05735"
/db_xref="GeneID:8454846"
CDS complement(540609..541052)
/locus_tag="RB2501_05735"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194154.1"
/db_xref="GI:260061074"
/db_xref="GeneID:8454846"
/translation="MKSYFHQLFDYNYYCNKKLIEACSEMKEVSARTAELFSHILNAH
HIWNARLNGSEPQYGVWDVHALSDWADIHYENQRASFELITNADDLEKRVGYENSEGR
SFSNTLRDILFHILNHSTHHRAQIVAEIRASGAEPPALDYIFYKR"
misc_feature complement(540612..541052)
/locus_tag="RB2501_05735"
/note="Mycothiol maleylpyruvate isomerase N-terminal
domain; Region: MDMPI_N; cl00986"
/db_xref="CDD:207273"
gene complement(541068..542081)
/locus_tag="RB2501_05740"
/db_xref="GeneID:8454847"
CDS complement(541068..542081)
/locus_tag="RB2501_05740"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194155.1"
/db_xref="GI:260061075"
/db_xref="GeneID:8454847"
/translation="MKRRKFLHQSAKASAAVSLFGALACKGNEKKETSDGSPDSGAMA
ATAEADLFFDLSLGQWSINRMIRNDGVDPYTFAEKAKGWGFTGLEYVSALYYGTLQPA
GFSAEAMQEFVDKSNEEAQKHGMKNVLIMVDGQGNLAVSDAAERAAAVENHHKWVDAA
AAMGCHAIRVNLAGSDVPDEWIANSIDGLTQLGNYARDKRINVLVENHGGLSSNGEMM
ARVFSQVELDNVGTLPDFGNFCIRRNDPSDYGSGCAEAYDIYKGVEELMPFAKAVSAK
SHDFGPDGNESEIDYVRMLKIVKDAGYRGYIGVEYEGSEIGEEAGIIATRDLLIKAAG
ELS"
misc_feature complement(541335..541850)
/locus_tag="RB2501_05740"
/note="Xylose isomerase-like TIM barrel; Region:
AP_endonuc_2; pfam01261"
/db_xref="CDD:201692"
gene 542288..544000
/locus_tag="RB2501_05745"
/db_xref="GeneID:8454848"
CDS 542288..544000
/locus_tag="RB2501_05745"
/codon_start=1
/transl_table=11
/product="GMC family oxidoreductase"
/protein_id="YP_003194156.1"
/db_xref="GI:260061076"
/db_xref="GeneID:8454848"
/translation="MSKFYYNQEQDSYDAIVVGSGISGGWAAKELCEAGLKTLVLERG
RMVKHIEDYPTANMDDWDFPHNGQLPREEAAKQEKQARTGYTVRAQHNFWFVNDLEHP
YNETRRFDWMRGYHVGGRSIMWGRHSYRWSDIDFEANKREGIAVDWPVRYKDIAPWYD
KVEAYIGVTGEKLGLPQLPDGVFEPMMELNCVEDHFRQKLAEQYEDRVVTAGRVAHIN
SDKQYEGRNRCQFRNRCIRGCPFGAYFSSVSSTLPAAERTGNLTLRPDSIVHEITYDP
DTKKATGVKIIDRVTKEEFEFKAKVVFLCASAIASTSILMQSRSDRFPNGLGNDSDQL
GRNIMDHHLNVGASGKFDGFEDKYYKGRKPNGIYLPRFRNLGGGTNVDSFKRGYGYQG
GASRGNWEDTIGELSHGKDLKEAILKPGGWTFGMGGFGEVLPYEDNRMTLDYNKLDQW
GLPTVTFDAGYKENELNMRQDMMEQAADMLEKAGFREVTPFNGNSALGLGIHEMGTAR
MGRDRRTSVVNGYNQVHDCKNVYVTDGAFMTSASCVNPSLTYMAFTARAADHAVKELK
KGNI"
misc_feature 542321..543979
/locus_tag="RB2501_05745"
/note="Choline dehydrogenase and related flavoproteins
[Amino acid transport and metabolism]; Region: BetA;
COG2303"
/db_xref="CDD:32458"
misc_feature 542327..>542416
/locus_tag="RB2501_05745"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 543587..543958
/locus_tag="RB2501_05745"
/note="GMC oxidoreductase; Region: GMC_oxred_C; pfam05199"
/db_xref="CDD:203202"
gene 544027..544650
/locus_tag="RB2501_05750"
/db_xref="GeneID:8454849"
CDS 544027..544650
/locus_tag="RB2501_05750"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194157.1"
/db_xref="GI:260061077"
/db_xref="GeneID:8454849"
/translation="MGMAMGLTLATPTVMSILQSCQQEAGTDWTPVFFSEGEGAVLVK
LVDIILPKTDTPAASELQVHAFIDSYMEAVPPAEEQDFMRMAFGAFIDKALADSGKEA
AEDLTVEDLEPVLAESLAKKTPEEEAVIMEAIGSYQEAVESGQEATLDEAISRYSFAN
NLRGSVIWAYKNTEYIGEEVLAYQPVPGEYIPCGDVDELTGGKAWSI"
misc_feature 544129..544590
/locus_tag="RB2501_05750"
/note="Gluconate 2-dehydrogenase subunit 3; Region:
Gluconate_2-dh3; pfam13618"
/db_xref="CDD:205796"
gene 544760..545614
/locus_tag="RB2501_05755"
/db_xref="GeneID:8454850"
CDS 544760..545614
/locus_tag="RB2501_05755"
/codon_start=1
/transl_table=11
/product="glyoxylate-induced protein"
/protein_id="YP_003194158.1"
/db_xref="GI:260061078"
/db_xref="GeneID:8454850"
/translation="MKPQQYANTFPQPAEAFTLDFAPHLGMFRESAGEDPLEQLRFMA
DAGFRSFEDNGMGNRPVAQQEAMARLMAERDMRMGVFVAHTIYWDRPNLASGDLALRE
EFLGEIRAAVAVAQRVNARWMTVVPGHLDLRQDMGHQTAHVVESLRRAADILEPHNLT
MVLEPLNFRNHPGMFLSGSAQAYEICRAVNSPACKILFDIYHQQIQEGNLIPNIEACW
DEIAYFQIGDNPGRKEPTTGEINYSNVFKYIAGRGYEGILGMEHGNSQEGISGEKAVI
EAYRAVDP"
misc_feature 544877..545479
/locus_tag="RB2501_05755"
/note="Xylose isomerase-like TIM barrel; Region:
AP_endonuc_2; pfam01261"
/db_xref="CDD:201692"
gene 545703..545834
/locus_tag="RB2501_05760"
/db_xref="GeneID:8454851"
CDS 545703..545834
/locus_tag="RB2501_05760"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194159.1"
/db_xref="GI:260061079"
/db_xref="GeneID:8454851"
/translation="MSQIDTYLYVLLTYVTLYSLARYAYRKFKNRLTPAEPAEQEMG"
gene 545947..546033
/locus_tag="RB2501_05765"
/db_xref="GeneID:8454852"
CDS 545947..546033
/locus_tag="RB2501_05765"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194160.1"
/db_xref="GI:260061080"
/db_xref="GeneID:8454852"
/translation="MENYYIILLGYLAAFLVIRSIVRPMLKD"
gene complement(546219..548657)
/locus_tag="RB2501_05770"
/db_xref="GeneID:8454853"
CDS complement(546219..548657)
/locus_tag="RB2501_05770"
/codon_start=1
/transl_table=11
/product="ribonucleoside-diphosphate reductase large
chain"
/protein_id="YP_003194161.1"
/db_xref="GI:260061081"
/db_xref="GeneID:8454853"
/translation="MFDKITARVRKLCYGLSDLVDPVKVAMRVIEGLYDGVTTSELDN
LAAEIAATLTTTHPDYAKLAARISVSNLHKNTKKSFSETMKDLYEYVNPRTGKKAPLV
ADDVFEVIQKHADTLDSMIIYNRDFGYDYFGFKTLERSYLLKLNGKIVERPQHMLMRV
SVGIHLDDLDAVRETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIY
NTLKQTAKISQSAGGIGLSIHNIRATGSYIAGTNGTSNGLVPMLRVFNDTARYVDQGG
GKRKGSFAIYLEPWHADIFDFLELKKNHGKEEMRARDLFYAMWISDLFMKRVEADAEW
TLMCPNECPGLYTTHSEEFEELYLKYEKEGKGRKTIKARELWEKILESQIETGTPYML
YKDAANRKSNQKNLGTIRSSNLCTEILEYTAEDEVAVCNLASIALPMFIKNGEFDHKE
LFRVTKRVTKNLNRVIDRNYYPIKEAENSNMRHRPIGLGVQGLADTFILLRLPFTSDE
AKKLNREIFETLYYAAATASMEMAKEEGPYSSYEGSPISQGQFQHNLWGIEDKELSGR
WDWEKLRKSIKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV
VNKHLLEDLVSLGLWNENMKQELMRANGSIQHIDAIPDNIKELYQTVWELSMKDIIDM
SRQRGYFIDQSQSLNLFMENANYAKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTL
DNTKKKVEVPEAVVTEEGVAPEKAKNLKVSTTPVKEQPVDAEPLSAEEMKALVAQAKA
ASGQTDDDCLMCGS"
misc_feature complement(546222..548657)
/locus_tag="RB2501_05770"
/note="ribonucleoside--diphosphate reductase large
subunit; Region: PLN02437"
/db_xref="CDD:178056"
misc_feature complement(548436..548651)
/locus_tag="RB2501_05770"
/note="ATP cone domain; Region: ATP-cone; pfam03477"
/db_xref="CDD:202657"
misc_feature complement(546471..548201)
/locus_tag="RB2501_05770"
/note="Class I ribonucleotide reductase; Region: RNR_I;
cd01679"
/db_xref="CDD:153088"
misc_feature complement(order(546873..546890,547362..547364,
547407..547409,547413..547415,547419..547421,
547959..547961,548046..548051,548091..548096))
/locus_tag="RB2501_05770"
/note="active site"
/db_xref="CDD:153088"
misc_feature complement(order(547830..547832,547836..547847,
547854..547859,547866..547871,547875..547880,
547890..547892,547926..547928,547971..547973,
547980..547985,547992..547997,548004..548006,
548013..548018,548058..548060))
/locus_tag="RB2501_05770"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153088"
misc_feature complement(order(546480..546485,547368..547370,
547407..547409,547413..547415,547419..547421,
548046..548048))
/locus_tag="RB2501_05770"
/note="catalytic residues [active]"
/db_xref="CDD:153088"
misc_feature complement(order(547875..547877,547890..547892,
547932..547934,547971..547973,548007..548009,
548016..548024))
/locus_tag="RB2501_05770"
/note="effector binding site; other site"
/db_xref="CDD:153088"
misc_feature complement(order(546507..546512,546516..546521,
546531..546536,546540..546548,547506..547508,
547527..547529,547539..547541,547671..547676,
547680..547685,547692..547694))
/locus_tag="RB2501_05770"
/note="R2 peptide binding site; other site"
/db_xref="CDD:153088"
gene complement(548822..549808)
/locus_tag="RB2501_05775"
/db_xref="GeneID:8454854"
CDS complement(548822..549808)
/locus_tag="RB2501_05775"
/codon_start=1
/transl_table=11
/product="ribonucleoside-diphosphate reductase small
chain"
/protein_id="YP_003194162.1"
/db_xref="GI:260061082"
/db_xref="GeneID:8454854"
/translation="MSAAEEPILKENKDRFVIFPIQHHDLWEWYKKCEACFWTAEEID
LHQDLSDWNNKLSDDEKYFIKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQ
IMMENIHSETYSLLIDTYVKDEKEKNVLFQAIENFPAIKKKADWALKWIESPSFAERL
IAFAAVEGIFFSGAFCSIFWLKKRGLMPGLTFSNELISRDEGMHCDYAVHLHNNHLVN
KVPKERITQIITNALDIEREFITESLPVSLIGMNAKLMTQYLEFVTDRLLVELECEKV
YNSTNPFDFMDMISLQGKTNFFEKRVSEYQKAGVMNKEKDTDSQKISFDADF"
misc_feature complement(548936..549763)
/locus_tag="RB2501_05775"
/note="Ribonucleotide Reductase, R2/beta subunit,
ferritin-like diiron-binding domain; Region: RNRR2;
cd01049"
/db_xref="CDD:153108"
misc_feature complement(order(549404..549406,549413..549418,
549467..549469,549476..549478,549485..549490,
549497..549499,549506..549511,549707..549709,
549728..549730,549761..549763))
/locus_tag="RB2501_05775"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153108"
misc_feature complement(order(549197..549199,549209..549214,
549470..549472,549482..549484,549491..549493,
549584..549586,549695..549697))
/locus_tag="RB2501_05775"
/note="putative radical transfer pathway; other site"
/db_xref="CDD:153108"
misc_feature complement(order(549197..549199,549206..549208,
549308..549310,549482..549484,549491..549493,
549584..549586))
/locus_tag="RB2501_05775"
/note="diiron center [ion binding]; other site"
/db_xref="CDD:153108"
misc_feature complement(549470..549472)
/locus_tag="RB2501_05775"
/note="tyrosyl radical; other site"
/db_xref="CDD:153108"
gene complement(550299..550874)
/locus_tag="RB2501_05780"
/db_xref="GeneID:8454855"
CDS complement(550299..550874)
/locus_tag="RB2501_05780"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194163.1"
/db_xref="GI:260061083"
/db_xref="GeneID:8454855"
/translation="MNQRTKWITRIAGVALTSLVVLGIISYMTPGNMLPESPMVTGKY
QLSSLQDGQVEYFEGPVYFELAKQHSGFRQIPVFKLHFINPNAQKGKGFGFIIPLSQD
SAFIRAEQYSVESTKDEFLSSLGTVFGYADLVKEKNTLYFTESGSISISASSFEEVAG
NMNMLLMDENGRSMRLKGRFNARPLYTQQLN"
gene complement(550871..551095)
/locus_tag="RB2501_05785"
/db_xref="GeneID:8454856"
CDS complement(550871..551095)
/locus_tag="RB2501_05785"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194164.1"
/db_xref="GI:260061084"
/db_xref="GeneID:8454856"
/translation="MKIKEKMMKRCLYYFLGLVAALVLAVLSGKATYGEGSVLDGTET
AAVSDEGSDALVSGAPLEKVRGIEPNQENP"
gene 551380..552114
/locus_tag="RB2501_05790"
/db_xref="GeneID:8454857"
CDS 551380..552114
/locus_tag="RB2501_05790"
/codon_start=1
/transl_table=11
/product="LytTr DNA-binding domain family protein"
/protein_id="YP_003194165.1"
/db_xref="GI:260061085"
/db_xref="GeneID:8454857"
/translation="MLEAVIVDDEEKALQSLQWELTNFSNEISVVASFTDAYKALSYL
DSNQPDCLFLDIEMPSMDGFQFIQKMQNSDVAVVITTAYNQYAIKALKNEAIDYLLKP
IDSDDLADTITKIRKHHARGMSAERLERILLNHNATSSHKKITLSTDGKLVFLENDDI
IYAESDGNYSTIYLSDGHKIVLTKKLKEVGELLPSDTFFRIHNSFIINLNKIKEFLKT
DGYVILKPNHKIPVSRQKKSDFLDMI"
misc_feature 551380..552111
/locus_tag="RB2501_05790"
/note="Response regulator of the LytR/AlgR family
[Transcription / Signal transduction mechanisms]; Region:
LytT; COG3279"
/db_xref="CDD:33090"
misc_feature 551392..551724
/locus_tag="RB2501_05790"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(551401..551406,551542..551544,551566..551568,
551620..551622,551671..551673,551680..551685)
/locus_tag="RB2501_05790"
/note="active site"
/db_xref="CDD:29071"
misc_feature 551542..551544
/locus_tag="RB2501_05790"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(551551..551556,551560..551568)
/locus_tag="RB2501_05790"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 551680..551688
/locus_tag="RB2501_05790"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 551827..552108
/locus_tag="RB2501_05790"
/note="LytTr DNA-binding domain; Region: LytTR;
smart00850"
/db_xref="CDD:197918"
gene 552128..554062
/locus_tag="RB2501_05795"
/db_xref="GeneID:8454858"
CDS 552128..554062
/locus_tag="RB2501_05795"
/codon_start=1
/transl_table=11
/product="Signal transduction ATPase, FimS family protein"
/protein_id="YP_003194166.1"
/db_xref="GI:260061086"
/db_xref="GeneID:8454858"
/translation="MRKHLFKTLLHICIAAISMQAAAQGIPKDFRQLADSLIRARPAN
YSAYKTALGPYSQDTLLMQYFVREAEIAAFTPGAIYGYTQLGLHFQNLSQNDRALDYL
AVALEKATESNNRELRIVALNRLGMAYRKMEAIKSALDYHQEALSLSESIADPGDFVL
RERNTAINGIGNIYRMLEQYGLAIEYFQRSLENDQALGNLEGQVANYQNIAECLEALG
DLTGAMSYYEDALRVNKSLGSDRSDVITRYGMAHVLAHEEKAAEALEILEAILPKARS
FRDPELLANVYVQLGWVLSRLKRYDEARGYLLNGLRISEELNLPSNMDSANRYLHDIE
MALGNYQAAIEFYKASVAARRMISNDLNRRYVYEMISKSEVDKRKDQIEILSKENEIV
KLRLRRNRTTLLVGALMLVLITLILYILYRQYQLNSEKKVLTLEQAMLRSQMNPHFLF
NSLNSIKLYIINNEQKNAVHYLNKFSKLVRKILEASSLKEIPLAEELETVELYMNIEN
IRFNNEIDFAVEMDPEINPSLVKIPSLILQPFLENAIWHGLSSKEGEKRIRILIRQED
SGYITLVIRDNGIGRAEADKLKQRRVLKRKSVGIDITRERLANFSRDYQYNYTIEIRD
LFDADGKSAGTEVILKIPTI"
misc_feature 552371..552580
/locus_tag="RB2501_05795"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature 552488..552835
/locus_tag="RB2501_05795"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(552488..552490,552494..552499,552506..552511,
552629..552634,552638..552643,552650..552655,
552749..552754,552761..552766,552773..552778)
/locus_tag="RB2501_05795"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 552488..552715
/locus_tag="RB2501_05795"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature order(552503..552505,552539..552541,552551..552553,
552560..552562,552638..552640,552674..552676,
552686..552688,552695..552697,552758..552760,
552794..552796,552806..552808,552815..552817)
/locus_tag="RB2501_05795"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature 552608..552835
/locus_tag="RB2501_05795"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature 552965..553192
/locus_tag="RB2501_05795"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature 553433..553678
/locus_tag="RB2501_05795"
/note="Histidine kinase; Region: His_kinase; pfam06580"
/db_xref="CDD:203479"
misc_feature 553733..554053
/locus_tag="RB2501_05795"
/note="Histidine kinase-, DNA gyrase B-, and HSP90-like
ATPase; Region: HATPase_c; pfam02518"
/db_xref="CDD:202270"
gene complement(554055..554621)
/locus_tag="RB2501_05800"
/db_xref="GeneID:8454859"
CDS complement(554055..554621)
/locus_tag="RB2501_05800"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194167.1"
/db_xref="GI:260061087"
/db_xref="GeneID:8454859"
/translation="MFELGKTVVSEELFEKHFVCDLQACKGACCVDGSAGAPVAEEER
GILEKIYTRVRPFLRDEGRKAIEAQGPYVRGSDGEWETPLVDGNECAYVVYSGETALC
GIEAAHREGAIDWKKPLSCHLYPVRIREYTALTAVNYHQWHICDPACSLGEATRVPIY
KFVREALVRKFGEAWYEELESVAEKHLK"
misc_feature complement(554076..554621)
/locus_tag="RB2501_05800"
/note="Protein of unknown function (DUF3109); Region:
DUF3109; pfam11307"
/db_xref="CDD:151748"
gene 554633..554755
/locus_tag="RB2501_05805"
/db_xref="GeneID:8454860"
CDS 554633..554755
/locus_tag="RB2501_05805"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194168.1"
/db_xref="GI:260061088"
/db_xref="GeneID:8454860"
/translation="MDKDILFNLKSGSGKFPYNHYWNLRIPITFAPQKIEHYEL"
gene 554745..555317
/locus_tag="RB2501_05810"
/db_xref="GeneID:8454861"
CDS 554745..555317
/locus_tag="RB2501_05810"
/codon_start=1
/transl_table=11
/product="transmembrane protein"
/protein_id="YP_003194169.1"
/db_xref="GI:260061089"
/db_xref="GeneID:8454861"
/translation="MNFNFREIATATMILFAVIDIVGSVPIIIDLRKKAGHIQSGKAT
LVAAIIMVAFLFVGEEILKLIGIDVNSFAVAGSFVLFFLAIEMILGITLYRDEAPEAA
SIVPLAFPLIAGAGTMTSLLSLRAEFDVVNIIVAIVANCIFVYGVLKASSRIERVLGQ
NGLSVIRKVFGVILLAISVKLFATNINGLF"
misc_feature 554757..555314
/locus_tag="RB2501_05810"
/note="MarC family integral membrane protein; Region:
MarC; pfam01914"
/db_xref="CDD:110875"
gene 555382..555570
/locus_tag="RB2501_05815"
/db_xref="GeneID:8454862"
CDS 555382..555570
/locus_tag="RB2501_05815"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194170.1"
/db_xref="GI:260061090"
/db_xref="GeneID:8454862"
/translation="MIVLIVLALALIVFNITMVDMQDPLEGDSLVALIGIAAALCAIV
LLLIYQTSRRIQKKLDGE"
gene complement(555626..557260)
/locus_tag="RB2501_05820"
/db_xref="GeneID:8454863"
CDS complement(555626..557260)
/locus_tag="RB2501_05820"
/codon_start=1
/transl_table=11
/product="carboxy-terminal protease"
/protein_id="YP_003194171.1"
/db_xref="GI:260061091"
/db_xref="GeneID:8454863"
/translation="MKNDLKKSYYIGPAVVAFALALGIFVGGKLHFNDTPEKLFTTNS
KKDKLNRLIDYIDYEYVDEVDTDSIVDVTVNNILDKLDPHSVYIPKSEMKRVSENMKG
DFVGIGINFYTFRDTITVTRTIPGGPSQRAGLQPGDKILLADGDTLYGRRIPDGQIVS
RLKGQEGSSVKLQVYRKTEDRLFSVNLRRDRIPIRSIDASYMLTSDMGYIRMNRFAET
TFDEFDAALRKLQQLGAKKLTLDLRDNPGGYLNVAERIADAFLPEGKLILFTRNKKGQ
TDSIYATSRGRFENKPVYVLINERSASASEIIAGALQDNDVGTIVGRRSFGKGLVQRE
MDLGDGSAVRLTVSRYYTPTGRSIQRDYQNGSQDYYDRFTERYHNGELTSVDSIRVAD
SLKFTTPGGKVVYGGGGIVPDVFVAIGSNEEEALAALDSRGYFSRFVFDHLEEDRNRY
ADYDEMRFYREFRTDDILFEHMVDFLSAFNLRIDYYEHEDLLKTYIKAGIAEQLFSPD
MKARILAPTDAMLLKVRDLDRPRLNPEEGPESRPDS"
misc_feature complement(556688..556951)
/locus_tag="RB2501_05820"
/note="PDZ domain of C-terminal processing-,
tail-specific-, and tricorn proteases, which function in
posttranslational protein processing, maturation, and
disassembly or degradation, in Bacteria, Archaea, and
plant chloroplasts. May be responsible for...; Region:
PDZ_CTP_protease; cd00988"
/db_xref="CDD:29045"
misc_feature complement(order(556772..556777,556784..556789,
556928..556930,556934..556945))
/locus_tag="RB2501_05820"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29045"
misc_feature complement(556181..>556663)
/locus_tag="RB2501_05820"
/note="C-terminal processing peptidase; serine protease
family S41; Region: Peptidase_S41_CPP; cd07560"
/db_xref="CDD:143476"
misc_feature complement(order(556277..556279,556352..556354))
/locus_tag="RB2501_05820"
/note="Catalytic dyad [active]"
/db_xref="CDD:143476"
gene complement(557250..557702)
/locus_tag="RB2501_05825"
/db_xref="GeneID:8454864"
CDS complement(557250..557702)
/locus_tag="RB2501_05825"
/codon_start=1
/transl_table=11
/product="deoxycytidylate deaminase"
/protein_id="YP_003194172.1"
/db_xref="GI:260061092"
/db_xref="GeneID:8454864"
/translation="MKEKKQEKYDKAYLRMANEWGKLSYCRRKQVGAIIVRERMIISD
GYNGTPSGFENFCEDEEGYTKWYVLHAEANAISKVASSTQSCEGATLYITLSPCRECS
KLIHQCGIRRVVYQKAYKDDSGLQFLARAGVELVHLPVIDIGVAVNEE"
misc_feature complement(557337..557675)
/locus_tag="RB2501_05825"
/note="Deoxycytidylate deaminase domain. Deoxycytidylate
deaminase catalyzes the deamination of dCMP to dUMP,
providing the nucleotide substrate for thymidylate
synthase. The enzyme binds Zn++, which is required for
catalytic activity. The activity of the...; Region:
deoxycytidylate_deaminase; cd01286"
/db_xref="CDD:29829"
misc_feature complement(order(557400..557402,557409..557414,
557487..557489,557493..557495,557559..557561))
/locus_tag="RB2501_05825"
/note="catalytic motif [active]"
/db_xref="CDD:29829"
misc_feature complement(order(557400..557402,557409..557411,
557487..557489,557493..557495))
/locus_tag="RB2501_05825"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:29829"
gene complement(557807..558394)
/locus_tag="RB2501_05830"
/db_xref="GeneID:8454865"
CDS complement(557807..558394)
/locus_tag="RB2501_05830"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194173.1"
/db_xref="GI:260061093"
/db_xref="GeneID:8454865"
/translation="MENFWMYGELGFLHVLDPQGYDHVLFLTALALPFTYRYWKRVFW
LATLFTVSHCLSLALAAYGVVDADAGWVEFLIPLTILLTALFNLLLTGAGPDRQAAFR
VHLVSTGLFGLIHGLGFSNYFRMLMSGESEKTGPLLGFALGIEAAQLLVLVVVLGVTY
LVVERLRAPTAWYIRLASLAIVGISTALLIGAWPL"
misc_feature complement(557951..558376)
/locus_tag="RB2501_05830"
/note="HupE / UreJ protein; Region: HupE_UreJ_2;
pfam13795"
/db_xref="CDD:205968"
gene complement(558480..559205)
/locus_tag="RB2501_05835"
/db_xref="GeneID:8454866"
CDS complement(558480..559205)
/locus_tag="RB2501_05835"
/codon_start=1
/transl_table=11
/product="Heat shock protein DnaJ-like protein"
/protein_id="YP_003194174.1"
/db_xref="GI:260061094"
/db_xref="GeneID:8454866"
/translation="MIKWFGAFVGYLFLRLPGAIIGFLIGSLIDGASRSGGTVFTDFT
RQKVSPADFELNLLSLCSIVIKADGRVSQQELDYVRQYFLATYGKEKANAIFRTFNEV
IKKREISGQRICAYLNQRTRYEVRLQLVHFLFGIAQADGHVSEAEIRKLRELAGYLQI
GATDFESIMAMFVESADNAYKILEIERTATDEEVKKAYRNMAKKYHPDRVNTQDEAIK
RGAEEKFKEVQKAYEAIQQERGI"
misc_feature complement(558483..559199)
/locus_tag="RB2501_05835"
/note="Dna-J like membrane chaperone protein; Provisional;
Region: djlA; PRK09430"
/db_xref="CDD:181850"
misc_feature complement(558729..559037)
/locus_tag="RB2501_05835"
/note="N-terminal tellurium resistance protein terB-like
domain of heat shock DnaJ-like proteins; Region:
terB_like_DjlA; cd07316"
/db_xref="CDD:143585"
misc_feature complement(order(558765..558767,558786..558788,
558981..558983,559002..559004))
/locus_tag="RB2501_05835"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:143585"
misc_feature complement(558507..558674)
/locus_tag="RB2501_05835"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of Hsp70s; Region: DnaJ;
cd06257"
/db_xref="CDD:99751"
misc_feature complement(order(558516..558521,558528..558533,
558540..558542,558582..558590))
/locus_tag="RB2501_05835"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
gene 559359..559769
/locus_tag="RB2501_05840"
/db_xref="GeneID:8454867"
CDS 559359..559769
/locus_tag="RB2501_05840"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194175.1"
/db_xref="GI:260061095"
/db_xref="GeneID:8454867"
/translation="MYPTELVKPMREDLSTAGFEELFTAEEVEAAIKQPGTVLVVVNS
VCGCAAANARPAAKLSLQNGKTPDRLVTVFAGVDREAVDAARSLMVPFPPSSPSMGLF
KDGELVHMIERHHIEGRPAEMIAENLTQAYDEFC"
misc_feature 559362..559766
/locus_tag="RB2501_05840"
/note="Disulphide isomerase; Region: Disulph_isomer;
pfam06491"
/db_xref="CDD:203466"
gene 559870..560607
/locus_tag="RB2501_05845"
/db_xref="GeneID:8454868"
CDS 559870..560607
/locus_tag="RB2501_05845"
/codon_start=1
/transl_table=11
/product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
/protein_id="YP_003194176.1"
/db_xref="GI:260061096"
/db_xref="GeneID:8454868"
/translation="MAKILAYPLSAIYLLVFGIVLVVFHPVQWVCLNLFGYQAHKASV
SLLNLCIMRCTHILGTTYRFEYANPMPESGPLIIVTNHQSMYDIPPLIWYLRKYHPKF
VSKKELGKGIPSVSYNLRHGGSALIDRKDRRQARAELERLGAYIEKTGRSAVIFPEGT
RSRTGEPKPFRTFGLSLLMDQAPSAQILPVTINNSWKLFRYGTFPLGLGARVRFTVHP
PMPVAGFTPEKMKELEAKIASKIDPPA"
misc_feature 559909..560598
/locus_tag="RB2501_05845"
/note="1-acyl-sn-glycerol-3-phosphate acyltransferase
[Lipid metabolism]; Region: PlsC; COG0204"
/db_xref="CDD:30553"
misc_feature 560038..560583
/locus_tag="RB2501_05845"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: AGPAT-like; Region:
LPLAT_AGPAT-like; cd07989"
/db_xref="CDD:153251"
misc_feature order(560113..560115,560122..560124,560128..560130,
560179..560190,560344..560352)
/locus_tag="RB2501_05845"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153251"
gene 560604..561263
/locus_tag="RB2501_05850"
/db_xref="GeneID:8454869"
CDS 560604..561263
/locus_tag="RB2501_05850"
/codon_start=1
/transl_table=11
/product="HAD superfamily hydrolase"
/protein_id="YP_003194177.1"
/db_xref="GI:260061097"
/db_xref="GeneID:8454869"
/translation="MTDAEFVEQTIDYVRSELDGAEGGHDWFHTQRVFRNTLLIAKDE
KVNILIVSLAALLHDVADSKFHDGDEDAGPKKADAFMRKIGVPQAIRTHVVQIIRNIS
FKNSLEKNKKPFTSDELFVVRDADRLDAIGAIGIARAFNFGGYKGRKLYDPEIAPRVK
MSKAEYKKSDGPTLNHFYEKLLLLKDRMHTDTGKRLAEKRHAFMLEYLEEFYREWNGT
A"
misc_feature 560658..561257
/locus_tag="RB2501_05850"
/note="Predicted HD superfamily hydrolase [General
function prediction only]; Region: COG1418"
/db_xref="CDD:31608"
misc_feature 560667..561254
/locus_tag="RB2501_05850"
/note="Metal dependent phosphohydrolases with conserved
'HD' motif; Region: HDc; cl00076"
/db_xref="CDD:213078"
misc_feature order(560688..560690,560775..560780,560979..560981)
/locus_tag="RB2501_05850"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:28958"
misc_feature 560778..560780
/locus_tag="RB2501_05850"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28958"
gene 561399..562820
/locus_tag="RB2501_05855"
/db_xref="GeneID:8454870"
CDS 561399..562820
/locus_tag="RB2501_05855"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="YP_003194178.1"
/db_xref="GI:260061098"
/db_xref="GeneID:8454870"
/translation="MQRRKFLKNTAASTAAFSIVPSFVLGKGHVPPSDTLYVAAFGVG
GRGAGVMRGLSETGKVKYVAFCDVDDRRAAPTYEMFPDVKRYKDYRDVYKKHLKDMDA
IMVATPDHTHATIALPFMREKKHAYVEKPLTHNIAEARMMTQVAREMGIVTQMGNQGA
SSNGSREAREWLDSGIIGRIEKVDCWTNRPVWPQGVPVPEGSDPIPKELDWDLWLGPA
AMRPYNDRYLPFKWRGWWDFGTGALGDMGCHIMETPFSVLELGYPTEAEASCTTNWVG
DFVEADYSESCPSSSIVRLKFDTDQHGQVALNWYDGGLKPDLPDELKDGETIGDNGGG
SIFYGTKGIMVCDTYSRNARLLPSDLMDMVSKPAPRLPRVEGGTGGHQRNFVEGCLNG
TPTSSDFEKAGKLTESVLMGNLAIRAFQYKNRVTDPDSGRSYFEYPGRKKIMWDGENM
RVTNFDKANEWVNGSYREGWDLA"
misc_feature 561570..562634
/locus_tag="RB2501_05855"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature <561693..561866
/locus_tag="RB2501_05855"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
gene complement(562889..563965)
/locus_tag="RB2501_05860"
/db_xref="GeneID:8454871"
CDS complement(562889..563965)
/locus_tag="RB2501_05860"
/codon_start=1
/transl_table=11
/product="radical SAM domain-containing protein"
/protein_id="YP_003194179.1"
/db_xref="GI:260061099"
/db_xref="GeneID:8454871"
/translation="MSHPEREIRKGRGAQSRQANRFEALQEQPLEDFLEHQRISGESE
KVRTGYLRVHPKTIVNKVSSPDVGMSYSMNPYQGCEHGCVYCYARNSHEYWGYGPGLD
FESKILVKENAPALLDRFLKRSSWKAAPIVLSGNTDCYQPAEREFGITRACLEIFHRY
RHPVGIITKNALVLRDMDLLTELHADGLVGVNISVTSLDESTRRLLEPRTASIAKRLE
TIRKLSDAGIPVNAMLAPIIPGINSHEVMDMARAVADAGARSFGFTVVRLNGAIAGIF
TEWLHRAMPDRAGKILSQIRACHGGSLNDSRFGIRNKGEGAVASQIHQLAAIARKKYF
AGRKFPELNTSLHAAHKSGQWELF"
misc_feature complement(562949..563845)
/locus_tag="RB2501_05860"
/note="DNA repair photolyase [DNA replication,
recombination, and repair]; Region: SplB; COG1533"
/db_xref="CDD:31722"
misc_feature complement(563177..563749)
/locus_tag="RB2501_05860"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature complement(order(563261..563263,563384..563386,
563456..563464,563555..563560,563564..563566,
563705..563713,563717..563719,563723..563725,
563729..563731))
/locus_tag="RB2501_05860"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene complement(564083..565618)
/locus_tag="RB2501_05865"
/db_xref="GeneID:8454872"
CDS complement(564083..565618)
/locus_tag="RB2501_05865"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003194180.1"
/db_xref="GI:260061100"
/db_xref="GeneID:8454872"
/translation="MAVALLAAWVCGAQEMPVDYMFGEKYNDRYRYSNLVTFSESAQG
NKVLVRAYYTGLILRPKGYLIERYNPQLELIDEYNYKFRGADFLDGFVANGQLYLLFL
SYDPERLSYTYSVHQTPVGAYNFTRKDLLTIPSVYVENPVDKNYYNRKFNSGFSTTLL
FDREQKAFALSLHHKKGDVNKHRILVYNFNMQPVMDVDFSASVEEKNYAFEALEMAPD
HSAAYLVAKAYFRKRRFKAEERKFQYELIKLARDGAQTASYDREGFYSEALKPILRNG
KLICVGFYADRKDERYNGLEYLEVDPQTLQAGIHKYNPFSHQFMVDKFGSESEKAIKN
LVFKDVHFTPDGSLLFNAEEYFVTNSIQDNGSGGRLRVERFHHNDIISVRLDSRGDLV
WARNINKTEVTQGDGAYASYSAYSKDGHTYFFICTAADNPQLLNNERLIFRQGLSRNR
NVFLIRLNPEGRISWEKIIDQSEARLPLMVSKPLVEEDEDRLYFYAKRGSKKQLVSVH
IRG"
gene complement(565652..566434)
/locus_tag="RB2501_05870"
/db_xref="GeneID:8454873"
CDS complement(565652..566434)
/locus_tag="RB2501_05870"
/codon_start=1
/transl_table=11
/product="3-hydroxybutyryl-CoA dehydratase"
/protein_id="YP_003194181.1"
/db_xref="GI:260061101"
/db_xref="GeneID:8454873"
/translation="MKFKNLKTEEKDGIALLTIDRPKKLNALNRKTIEELHEAFSSLD
ADPDIRAIVVRGSGPKAFVAGADIAEFASYGPEEGRDLAAKGQETLFDLVEQLGTPVI
AAVNGFALGGGLELALACHIRVASHNARMGLPEVSLGLIPGYGGTQRLPELVGRGRAL
EMILSGGMIDAERALEYGLVNHVTALEELESYCLQLAGKIAKNSPVAIRYAIKAVNAG
SRSSVSGFRTEIDAFGSCFGTADFKEGTTAFLEKRKPDFPGE"
misc_feature complement(565664..566434)
/locus_tag="RB2501_05870"
/note="3-hydroxybutyryl-CoA dehydratase; Validated;
Region: PRK05809"
/db_xref="CDD:180270"
misc_feature complement(565835..566419)
/locus_tag="RB2501_05870"
/note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate synthase,
methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
dehydratase, and dienoyl-CoA isomerase; Region:
crotonase-like; cd06558"
/db_xref="CDD:119339"
misc_feature complement(order(566021..566023,566030..566035,
566099..566107,566111..566113,566231..566245,
566255..566257,566354..566356,566360..566362))
/locus_tag="RB2501_05870"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119339"
misc_feature complement(order(566099..566101,566237..566239))
/locus_tag="RB2501_05870"
/note="oxyanion hole (OAH) forming residues; other site"
/db_xref="CDD:119339"
misc_feature complement(order(565835..565840,565847..565849,
565892..565894,565901..565903,565934..565936,
565943..565948,565952..565957,565961..565966,
565979..565984,565988..565996,566000..566002,
566018..566029,566063..566074,566135..566137,
566159..566161))
/locus_tag="RB2501_05870"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
gene complement(566501..567955)
/locus_tag="RB2501_05875"
/db_xref="GeneID:8454874"
CDS complement(566501..567955)
/locus_tag="RB2501_05875"
/codon_start=1
/transl_table=11
/product="sensory transduction histidine kinase"
/protein_id="YP_003194182.1"
/db_xref="GI:260061102"
/db_xref="GeneID:8454874"
/translation="MFKKMSLRSRIFVSMILLVLIASVLIAGVTVYQYREQAQDYHQD
RLERKEEQIKQAITFALQRTTYPVTTENLGLIFKDEIYRIAIIENANFNIYDLDGQLI
KSSRPKFDNDSVSLCLDAHVLNALRGSMEKRYVESAAAAGDNYQASYSFITDSRFKPI
GILNLPYFEENSFYDMELGEFMMRLGAVYLIMLLSAIALAYFISKYITRSLETVSDKL
THTRLARTNEKIFLDDPSEEIGKLIDAYNSMIDELELSATKLARSEREQAWREMAKQV
AHEIKNPLTPMRLSVQSFERKFDPRDPDVGRQVAEFSKTLIQQIDTLSSIASAFSNFA
KMPAQQNETLNVVEIVKLALDIFNEPYIHFMADEQEIIAKMDRTQLIRVVTNLVKNAI
QAVPEVDHPRILVSVAAEDGFVKIMVADNGIGIEADNRDKVFEPKFTTKSSGMGLGLG
MVKTIVETYGGRIEFTSQKGKGTVFTVYLPREKA"
misc_feature complement(566504..567505)
/locus_tag="RB2501_05875"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature complement(567194..567403)
/locus_tag="RB2501_05875"
/note="HAMP domain; Region: HAMP; pfam00672"
/db_xref="CDD:189662"
misc_feature complement(566951..567160)
/locus_tag="RB2501_05875"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(566966..566968,566978..566980,
566987..566989,566999..567001,567008..567010,
567020..567022,567086..567088,567095..567097,
567107..567109,567116..567118,567128..567130,
567140..567142))
/locus_tag="RB2501_05875"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(567122..567124)
/locus_tag="RB2501_05875"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(566519..566818)
/locus_tag="RB2501_05875"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CD 