LOCUS NC_013315 4110554 bp DNA circular BCT 23-DEC-2012
DEFINITION Clostridium difficile CD196 chromosome, complete genome.
ACCESSION NC_013315
VERSION NC_013315.1 GI:260681769
DBLINK Project: 41017
BioProject: PRJNA41017
KEYWORDS complete genome.
SOURCE Clostridium difficile CD196
ORGANISM Clostridium difficile CD196
Bacteria; Firmicutes; Clostridia; Clostridiales;
Peptostreptococcaceae.
REFERENCE 1 (bases 1 to 4110554)
AUTHORS Stabler,R.A., He,M., Dawson,L., Martin,M., Valiente,E., Corton,C.,
Lawley,T.D., Sebaihia,M., Quail,M.A., Rose,G., Gerding,D.N.,
Gibert,M., Popoff,M.R., Parkhill,J., Dougan,G. and Wren,B.W.
TITLE Comparative genome and phenotypic analysis of Clostridium difficile
027 strains provides insight into the evolution of a hypervirulent
bacterium
JOURNAL Genome Biol. 10 (9), R102 (2009)
PUBMED 19781061
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 4110554)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (06-OCT-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4110554)
AUTHORS He,M.
TITLE Direct Submission
JOURNAL Submitted (13-AUG-2009) He M., Pathogen Genomics, Wellcome Trust
Sanger Institute, Wellcome Trust Genome Campus, Hinxton,
Cambridgeshire CB10 1SA, UNITED KINGDOM
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to FN538970.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..4110554
/organism="Clostridium difficile CD196"
/mol_type="genomic DNA"
/strain="CD196"
/db_xref="taxon:645462"
gene 1..1320
/gene="dnaA"
/locus_tag="CD196_0001"
/db_xref="GeneID:8463285"
CDS 1..1320
/gene="dnaA"
/locus_tag="CD196_0001"
/codon_start=1
/transl_table=11
/product="chromosomal replication initiator protein"
/protein_id="YP_003213055.1"
/db_xref="GI:260681770"
/db_xref="GeneID:8463285"
/translation="MDIVSLWDKTLQLIKGDLTSVSFNTFFKNIVPLKIHLNDLILLA
PSDFNKDILENRYLHLIEDAISQLSLKKYNIKFVLSEKEVADLNSDSTDLNYRVLYPN
LNPKYTFDTFVIGNSNRFAHAACVAVAESPAKAYNPLFLYGGVGLGKTHLMHAIGHHI
VSQKKDSKVVYVSSEKFTNELINSIKDDKNEEFRNKYRNVDVLLIDDIQFIAGKERTQ
EEFFHTFNTLHEANKQIIISSDRPPKDIPTLEDRLRSRFEMGLITDIQAPDFETRIAI
LRKKAQLERIDVPNEVMSYIAKNIKSNIRELEGALTRVVAYSSLSNRVISFDLATEAL
KDIITTSKNEEINVLRIKEKVSSVFNLKMEDFNSKKRTRSIAYPRQIAMYLTRELTDL
SLPKIGEEFGGRDHTTVIHAHDKVSKDIEESEEIKTKIDKIISDLKG"
misc_feature 4..1317
/gene="dnaA"
/locus_tag="CD196_0001"
/note="chromosomal replication initiation protein;
Reviewed; Region: dnaA; PRK00149"
/db_xref="CDD:178902"
misc_feature 13..201
/gene="dnaA"
/locus_tag="CD196_0001"
/note="DnaA N-terminal domain; Region: DnaA_N; pfam11638"
/db_xref="CDD:204696"
misc_feature 352..783
/gene="dnaA"
/locus_tag="CD196_0001"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 427..450
/gene="dnaA"
/locus_tag="CD196_0001"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(430..453,616..618,718..720)
/gene="dnaA"
/locus_tag="CD196_0001"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 604..621
/gene="dnaA"
/locus_tag="CD196_0001"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 754..756
/gene="dnaA"
/locus_tag="CD196_0001"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 1048..1311
/gene="dnaA"
/locus_tag="CD196_0001"
/note="C-terminal domain of bacterial DnaA proteins. The
DNA-binding C-terminal domain of DnaA contains a
helix-turn-helix motif that specifically interacts with
the DnaA box, a 9-mer motif that occurs repetitively in
the replication origin oriC. Multiple...; Region:
Bac_DnaA_C; cd06571"
/db_xref="CDD:119330"
misc_feature order(1111..1113,1135..1140,1159..1161,1177..1185,
1210..1224,1231..1233,1240..1245)
/gene="dnaA"
/locus_tag="CD196_0001"
/note="DnaA box-binding interface [nucleotide binding];
other site"
/db_xref="CDD:119330"
gene 1460..2668
/gene="dnaN"
/locus_tag="CD196_0002"
/db_xref="GeneID:8466019"
CDS 1460..2668
/gene="dnaN"
/locus_tag="CD196_0002"
/note="binds the polymerase to DNA and acts as a sliding
clamp"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit beta"
/protein_id="YP_003213056.1"
/db_xref="GI:260681771"
/db_xref="GeneID:8466019"
/translation="MLYILINIINNTYYYYYYDFNLFLYIKSQRRLSTLKIICNQKIL
ANRIGIAQKAINGKTTIELLKGILISTEEGQLKLTGYDAEIGIETYVQAEIIEKGDVV
VDARLFGDIIRKLPDSFVEIETDSENNIYINCVNSRFKIKGYAAKEFPKLPELNEEDL
YSIPQEILKNMIKQTVFAISQDQTKPVLMGELLEIVDRNLNLVAIDGYRLAVKSCSVD
SLTENIKVIIPGKTLIDVNSLLSGEDNVKVGFNEKNAIFIINDTKIITRLLEGDFIDY
KKLLPREHNSRVKLNTKELLNSIERASLLSQSEKNNLIKLSIRDKVMAITSNTEKGNV
YEEVEIDLDGDYLDIAFNSRYFIEGLKNIDNEEIFIEFTTNVNPCIIKPTDDVNYIYL
LLPVRISSNI"
misc_feature 1562..2650
/gene="dnaN"
/locus_tag="CD196_0002"
/note="Beta clamp domain. The beta subunit (processivity
factor) of DNA polymerase III holoenzyme, refered to as
the beta clamp, forms a ring shaped dimer that encircles
dsDNA (sliding clamp) in bacteria. The beta-clamp is
structurally similar to the trimeric...; Region:
beta_clamp; cd00140"
/db_xref="CDD:29053"
misc_feature 1565..2653
/gene="dnaN"
/locus_tag="CD196_0002"
/note="DNA polymerase III subunit beta; Validated; Region:
PRK05643"
/db_xref="CDD:180180"
misc_feature order(1631..1633,1775..1777,1796..1798,2150..2152)
/gene="dnaN"
/locus_tag="CD196_0002"
/note="putative DNA binding surface [nucleotide binding];
other site"
/db_xref="CDD:29053"
misc_feature order(1778..1780,1787..1789,1865..1867,1871..1873,
2369..2371,2462..2467)
/gene="dnaN"
/locus_tag="CD196_0002"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29053"
misc_feature order(2072..2074,2078..2089,2513..2515,2639..2650)
/gene="dnaN"
/locus_tag="CD196_0002"
/note="beta-clamp/clamp loader binding surface; other
site"
/db_xref="CDD:29053"
misc_feature order(2072..2074,2078..2083,2294..2296,2402..2404,
2441..2446,2522..2524,2639..2650)
/gene="dnaN"
/locus_tag="CD196_0002"
/note="beta-clamp/translesion DNA polymerase binding
surface; other site"
/db_xref="CDD:29053"
gene 2805..3011
/locus_tag="CD196_0003"
/db_xref="GeneID:8466028"
CDS 2805..3011
/locus_tag="CD196_0003"
/codon_start=1
/transl_table=11
/product="RNA-binding mediating protein"
/protein_id="YP_003213057.1"
/db_xref="GI:260681772"
/db_xref="GeneID:8466028"
/translation="MTEITIESEYIKLDQFLKLAEIASTGGHAKFLIQEGLVTVNDEI
ELRRGKKIKSGDIVKIEGTKIKVL"
misc_feature 2835..3008
/locus_tag="CD196_0003"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:29105"
misc_feature order(2838..2840,2874..2879,2883..2888,2892..2897,
2904..2909,2913..2915,2934..2957,2961..2963)
/locus_tag="CD196_0003"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:29105"
gene 3029..4144
/gene="recF"
/locus_tag="CD196_0004"
/db_xref="GeneID:8463286"
CDS 3029..4144
/gene="recF"
/locus_tag="CD196_0004"
/codon_start=1
/transl_table=11
/product="DNA replication and repair protein"
/protein_id="YP_003213058.1"
/db_xref="GI:260681773"
/db_xref="GeneID:8463286"
/translation="MKLKSLQLVNFRNYKKLHLEFNGKVNLLVGKNGQGKTNIVESIY
MLSFGKSFRTNKDKEMVRFNSENLYIGGSFSKYNKYSLIELIIGKDKKGIRINKVPLQ
KIQELLGNLNVVIFSPEDLRLVKEGPKERRAFIDKEISQIIPKYYKYLTNYNKTLSQR
SRVLKNIHVDEALLDVYDDTLAKYGSYIYILRRDFIKKIANISENMHMNLTNGVERLS
IRYKNQINITDEDTIDTVYNKFLAKLSSNRPNDIESKTTRYGIHKDDLNIFINDLDAR
LFGSQGQQRTASISLKLSEIELIKNEVEEYPVLILDDVFSELDEARQKLLVNNLSNVQ
MFITSAEVSHKKIFDEKNVTIFNIENGDVISIENGGN"
misc_feature 3029..4123
/gene="recF"
/locus_tag="CD196_0004"
/note="recombination protein F; Reviewed; Region: recF;
PRK00064"
/db_xref="CDD:178835"
misc_feature 3035..>3586
/gene="recF"
/locus_tag="CD196_0004"
/note="ATP-binding cassette domain of RecF; Region:
ABC_RecF; cd03242"
/db_xref="CDD:213209"
misc_feature 3116..3139
/gene="recF"
/locus_tag="CD196_0004"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213209"
misc_feature order(3125..3130,3134..3142,3329..3331)
/gene="recF"
/locus_tag="CD196_0004"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213209"
misc_feature 3320..3331
/gene="recF"
/locus_tag="CD196_0004"
/note="Q-loop/lid; other site"
/db_xref="CDD:213209"
misc_feature <3806..4111
/gene="recF"
/locus_tag="CD196_0004"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
misc_feature 3863..3892
/gene="recF"
/locus_tag="CD196_0004"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature 3950..3967
/gene="recF"
/locus_tag="CD196_0004"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature 3974..3985
/gene="recF"
/locus_tag="CD196_0004"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature 4037..4057
/gene="recF"
/locus_tag="CD196_0004"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene 4145..6046
/gene="gyrB"
/locus_tag="CD196_0005"
/db_xref="GeneID:8466515"
CDS 4145..6046
/gene="gyrB"
/locus_tag="CD196_0005"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit B"
/protein_id="YP_003213059.1"
/db_xref="GI:260681774"
/db_xref="GeneID:8466515"
/translation="MKQEYGASQIQVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEVVD
NSIDEALQGYCSDIYVSINEDGSVLVKDNGRGIPVEIHPKTGKSTLETVLTNLHAGGK
FGGGGYKVSGGLHGVGVSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEVVGESQ
DKGTMIQFMPDETIFDEIEFKYETLEYRLRELSFLNKGIKIVFEDKREGQEKRKEFHY
TGGLVEYIKYLNKSRTGIHDDIVYIDKKVDDCFVELAMQYTDGYTENIYSFANNINTH
EGGSHLSGFKAALTKTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEG
QTKTKLGNSFMRGIVDSVTVDELGSFLEENPSTARIIVDKALRAQRAREAAKKARELT
RRKSVLESTSLPGKLADCAEKDPSKSEIFLVEGDSAGGSAKQGRDRNSQAILPLRGKI
LNVEKSRLDRILSSDEIKNMITAYGCGIGEDFDIDKARYHKIIIMTDADVDGAHIRTL
LLTFFFRYMRPLIDEGYVYAAQPPLYKVTKQKKEHYVYSDKELNILLDEIGRNGVELQ
RYKGLGEMNAEQLWETTMNPETRTLLQVTVEDAAIADEVFSMLMGDKVAPRKEFIEEN
ARFVRNLDI"
misc_feature 4145..6043
/gene="gyrB"
/locus_tag="CD196_0005"
/note="DNA gyrase subunit B; Validated; Region: gyrB;
PRK05644"
/db_xref="CDD:180181"
misc_feature 4247..>4396
/gene="gyrB"
/locus_tag="CD196_0005"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature 4277..4279
/gene="gyrB"
/locus_tag="CD196_0005"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(4364..4366,4370..4372)
/gene="gyrB"
/locus_tag="CD196_0005"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 4802..5263
/gene="gyrB"
/locus_tag="CD196_0005"
/note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
a ribosomal S5 domain 2-like fold, of the type found in
proteins of the type IIA family of DNA topoisomerases
similar to the B subunits of E. coli DNA gyrase and E.
coli Topoisomerase IV which are; Region:
TopoII_Trans_DNA_gyrase; cd00822"
/db_xref="CDD:48467"
misc_feature 4955..4957
/gene="gyrB"
/locus_tag="CD196_0005"
/note="anchoring element; other site"
/db_xref="CDD:48467"
misc_feature order(5129..5131,5138..5143,5147..5149)
/gene="gyrB"
/locus_tag="CD196_0005"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48467"
misc_feature order(5147..5149,5153..5155)
/gene="gyrB"
/locus_tag="CD196_0005"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:48467"
misc_feature 5396..5737
/gene="gyrB"
/locus_tag="CD196_0005"
/note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in proteins of the type IIA family of DNA topoisomerases
similar to the Escherichia coli GyrB subunit. TopoIIA
enzymes cut both strands of the...; Region:
TOPRIM_TopoIIA_GyrB; cd03366"
/db_xref="CDD:173786"
misc_feature order(5414..5419,5426..5428,5633..5635,5639..5641,
5645..5647)
/gene="gyrB"
/locus_tag="CD196_0005"
/note="active site"
/db_xref="CDD:173786"
misc_feature order(5414..5416,5633..5635)
/gene="gyrB"
/locus_tag="CD196_0005"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173786"
misc_feature 5819..6010
/gene="gyrB"
/locus_tag="CD196_0005"
/note="DNA gyrase B subunit, carboxyl terminus; Region:
DNA_gyraseB_C; pfam00986"
/db_xref="CDD:201537"
gene 6066..8492
/gene="gyrA"
/locus_tag="CD196_0006"
/db_xref="GeneID:8466207"
CDS 6066..8492
/gene="gyrA"
/locus_tag="CD196_0006"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit A"
/protein_id="YP_003213060.1"
/db_xref="GI:260681775"
/db_xref="GeneID:8466207"
/translation="MEENNKILPIEIAEEMKKSYIDYSMSVIAGRALPDVRDGLKPVH
RRILYSMSELNLTPDKPYRKSARIVGDVLGKYHPHGDTAVYYAMVRMAQDFSTRALLV
DGHGNFGSVDGDSPAAMRYTEAKMSKLSLELLRDIEKETVDFKPNFDESLKEPSVLPA
RYPNLLVNGSNGIAVGMATSIPPHNLAEVIDATVYLIDNPECSVDDLIKFVQGPDFPT
AAIIMGKESIAEAYRTGRGKVKVRSRAFIEELPKGKQQIIVTEIPYQVNKAKLVERIA
ELVKEKRIEGISDLRDESNRNGMRIVIELKRDANANIVLNNLYKHSQMEDTFSIIMLA
LVDGQPRVLNLKQILYHYIKHQEDVVTRRTKFELNKAEARAHILEGLKIALDNIDAVI
SLIRASKTGQEAKIGLIEKFKLTEIQAQAILDMRLQRLTGLERDKIEAEYEDLIKKIN
RLKEILADERLLLNVIKNEITIIKENYSDERRTEIRHAEGEIDMRDLISDEEIAITLT
HFGYIKRLPSDTYKSQKRGGRGISALTTREEDFVRHLVTTTTHSRLLFFTNKGRVFKL
NAYEIPEGKRQAKGTAIVNLLQLSADEKIATLIPIDGNDENEYLLLATKKGIVKKTKR
EEFKNINKSGLIAIGLRDDDELIGVELTDGKQEVLLVTKEGMSIRFDENDIRYMGRTA
MGVKGITLSKEDFVVSMNLCSKGTDVLVVSKNGFGKRTNIEEYRSQIRAGKGIKTYNI
SEKTGTIVGADMVNEDDEIMIINSDGVLIRIRVNEISLFGRVTSGVKLMKTNDEVNVV
SIAKINIEEE"
misc_feature 6072..8486
/gene="gyrA"
/locus_tag="CD196_0006"
/note="DNA gyrase subunit A; Validated; Region: PRK05560"
/db_xref="CDD:180128"
misc_feature 6153..7475
/gene="gyrA"
/locus_tag="CD196_0006"
/note="DNA Topoisomerase, subtype IIA; domain A';
bacterial DNA topoisomerase IV (C subunit, ParC),
bacterial DNA gyrases (A subunit, GyrA),mammalian DNA
toposiomerases II. DNA topoisomerases are essential
enzymes that regulate the conformational changes in
DNA...; Region: TOP4c; cd00187"
/db_xref="CDD:29149"
misc_feature order(6153..6233,6246..6395,6399..6455,6459..6530,
6537..6539)
/gene="gyrA"
/locus_tag="CD196_0006"
/note="CAP-like domain; other site"
/db_xref="CDD:29149"
misc_feature 6426..6428
/gene="gyrA"
/locus_tag="CD196_0006"
/note="active site"
/db_xref="CDD:29149"
misc_feature order(7221..7229,7236..7247,7269..7274,7323..7373)
/gene="gyrA"
/locus_tag="CD196_0006"
/note="primary dimer interface [polypeptide binding];
other site"
/db_xref="CDD:29149"
misc_feature 7578..7712
/gene="gyrA"
/locus_tag="CD196_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature 7725..7871
/gene="gyrA"
/locus_tag="CD196_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature 7887..8024
/gene="gyrA"
/locus_tag="CD196_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature 8031..8174
/gene="gyrA"
/locus_tag="CD196_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature 8184..8327
/gene="gyrA"
/locus_tag="CD196_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
misc_feature 8334..8477
/gene="gyrA"
/locus_tag="CD196_0006"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:202843"
gene 8561..8857
/locus_tag="CD196_0007"
/db_xref="GeneID:8466206"
CDS 8561..8857
/locus_tag="CD196_0007"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213061.1"
/db_xref="GI:260681776"
/db_xref="GeneID:8466206"
/translation="MCNKRSCKKGGFLLLGAILGFIFGMFFAPKKGSELRKETKEKFN
DVKENPKEVLHETFNDVKERIINLVDDDNNEEDIKISEEDIVISKSFDDEGDVN"
misc_feature <8645..8773
/locus_tag="CD196_0007"
/note="YtxH-like protein; Region: YtxH; pfam12732"
/db_xref="CDD:205050"
gene 8857..9117
/locus_tag="CD196_0008"
/db_xref="GeneID:8463287"
CDS 8857..9117
/locus_tag="CD196_0008"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213062.1"
/db_xref="GI:260681777"
/db_xref="GeneID:8463287"
/translation="MNAWGWQIGAVLVGSSALIVAIYLAKTLNSINKVVEKAYKIVDY
NERHIQDIVENASSISKGIDDIVYVINKILSIGNIFKIIKRK"
misc_feature <8857..>8976
/locus_tag="CD196_0008"
/note="alpha-ketoglutarate transporter; Provisional;
Region: PRK10406"
/db_xref="CDD:182433"
gene 9135..9446
/gene="rsbV"
/locus_tag="CD196_0009"
/db_xref="GeneID:8463288"
CDS 9135..9446
/gene="rsbV"
/locus_tag="CD196_0009"
/codon_start=1
/transl_table=11
/product="anti-sigma-B factor antagonist"
/protein_id="YP_003213063.1"
/db_xref="GI:260681778"
/db_xref="GeneID:8463288"
/translation="MNIDSNLDSQNKFWNVCLDGELDVSTADKLKEHLHALIEKNMLD
VKINLKDLDYIDSTGLGAMIGVLKKLKINEKEIYIVNPKSNVKKIFTITGLDKIFKVE
G"
misc_feature 9180..9437
/gene="rsbV"
/locus_tag="CD196_0009"
/note="Sulphate Transporter and Anti-Sigma factor
antagonist) domain of anti-anti-sigma factors, key
regulators of anti-sigma factors by phosphorylation;
Region: STAS_anti-anti-sigma_factors; cd07043"
/db_xref="CDD:132914"
misc_feature <9186..9440
/gene="rsbV"
/locus_tag="CD196_0009"
/note="Sulfate permease and related transporters (MFS
superfamily) [Inorganic ion transport and metabolism];
Region: SUL1; COG0659"
/db_xref="CDD:31004"
misc_feature order(9195..9197,9201..9209,9225..9227,9294..9296,
9300..9308,9312..9320,9327..9332,9396..9398,9408..9413,
9417..9419)
/gene="rsbV"
/locus_tag="CD196_0009"
/note="anti sigma factor interaction site; other site"
/db_xref="CDD:132914"
misc_feature 9303..9305
/gene="rsbV"
/locus_tag="CD196_0009"
/note="regulatory phosphorylation site [posttranslational
modification]; other site"
/db_xref="CDD:132914"
gene 9450..9857
/gene="rsbW"
/locus_tag="CD196_0010"
/db_xref="GeneID:8466605"
CDS 9450..9857
/gene="rsbW"
/locus_tag="CD196_0010"
/codon_start=1
/transl_table=11
/product="anti-sigma-B factor (serine-protein kinase)"
/protein_id="YP_003213064.1"
/db_xref="GI:260681779"
/db_xref="GeneID:8466605"
/translation="MACETIKMEITTNPDYVSIIRLTASGIANKMGFPIDDIEDIKVA
VSEACTNAIKHSKDDVFNIVFNILDNAINIEIQDNGKGYDVSSISTPDLENPKESGLG
LFIIKTLMDDVDIESEHNQGTKIKMTKYLGVDI"
misc_feature 9477..9836
/gene="rsbW"
/locus_tag="CD196_0010"
/note="Histidine kinase-like ATPase domain; Region:
HATPase_c_2; pfam13581"
/db_xref="CDD:205759"
misc_feature 9570..9833
/gene="rsbW"
/locus_tag="CD196_0010"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(9588..9590,9600..9602,9609..9611,9675..9677,
9681..9683,9687..9689,9693..9698,9747..9758,9792..9794,
9798..9800,9813..9818,9822..9824)
/gene="rsbW"
/locus_tag="CD196_0010"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 9600..9602
/gene="rsbW"
/locus_tag="CD196_0010"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(9687..9689,9693..9695,9747..9749,9753..9755)
/gene="rsbW"
/locus_tag="CD196_0010"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 9857..10630
/gene="sigB"
/locus_tag="CD196_0011"
/db_xref="GeneID:8466606"
CDS 9857..10630
/gene="sigB"
/locus_tag="CD196_0011"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma-B factor"
/protein_id="YP_003213065.1"
/db_xref="GI:260681780"
/db_xref="GeneID:8466606"
/translation="MKNVANATHYLNMDTKELFNLYNKNKNVDIRNILIERHLYLARL
LAKKYINKGVDFEDIYQVASLALIYAIDRYDVEKGFEFSSFATPTIVGEIKKYFRDKV
WTLRVPRRIQELSKKISDAKIKLEQENKKHPKVKDIADYIGVSEEDVLEAMEASYGYQ
PMSLDSSSNDDSEDKDITLIDKIGKEEGNFGSIEYEDFINKFIETLNELEVKIFKDRF
FFDKTQSSIAKELGISQMTVSRLEKKVVEKLKKEYEKNL"
misc_feature 9938..10576
/gene="sigB"
/locus_tag="CD196_0011"
/note="RNA polymerase sigma-70 factor, sigma-B/F/G
subfamily; Region: SigBFG; TIGR02980"
/db_xref="CDD:200225"
misc_feature 9956..10168
/gene="sigB"
/locus_tag="CD196_0011"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature 10193..>10336
/gene="sigB"
/locus_tag="CD196_0011"
/note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539"
/db_xref="CDD:146934"
misc_feature 10451..10576
/gene="sigB"
/locus_tag="CD196_0011"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(10475..10477,10505..10507,10523..10528,10556..10558,
10562..10567,10571..10576)
/gene="sigB"
/locus_tag="CD196_0011"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 10716..12345
/gene="16SrRNA"
/locus_tag="CD196_r28"
/db_xref="GeneID:8466630"
rRNA 10716..12345
/gene="16SrRNA"
/locus_tag="CD196_r28"
/product="16S ribosomal RNA"
/db_xref="GeneID:8466630"
gene 12370..12442
/locus_tag="CD196_t001"
/db_xref="GeneID:8465768"
tRNA 12370..12442
/locus_tag="CD196_t001"
/product="tRNA-Ala"
/anticodon=(pos:12403..12405,aa:Ala,seq:tgc)
/codon_recognized="GCA"
/db_xref="GeneID:8465768"
gene 12696..15646
/gene="23SrRNA"
/locus_tag="CD196_r21"
/db_xref="GeneID:8466798"
rRNA 12696..15646
/gene="23SrRNA"
/locus_tag="CD196_r21"
/product="23S ribosomal RNA"
/db_xref="GeneID:8466798"
gene 15708..15824
/gene="5SrRNA"
/locus_tag="CD196_r22"
/db_xref="GeneID:8465778"
rRNA 15708..15824
/gene="5SrRNA"
/locus_tag="CD196_r22"
/product="5S ribosomal RNA"
/db_xref="GeneID:8465778"
gene 15951..16460
/locus_tag="CD196_0012"
/db_xref="GeneID:8465788"
CDS 15951..16460
/locus_tag="CD196_0012"
/codon_start=1
/transl_table=11
/product="small-molecule-binding protein"
/protein_id="YP_003213066.1"
/db_xref="GI:260681781"
/db_xref="GeneID:8465788"
/translation="MNSDERRSKLIDILKESKCPVKGGMLAEILNVSRQVIVQDIALI
RARGFEIIATPQGYIIYNQPYFTKQIKCKNHRNSKEIYDELKIIVDLGGIVKDVIVNH
PTYGQITAELNIHSKMDIDNFMKKVETNEFKQLSVLTECSHIHTIETLKEETIEVITK
ELEDRGILS"
misc_feature 15951..16454
/locus_tag="CD196_0012"
/note="Predicted small molecule binding protein (contains
3H domain) [General function prediction only]; Region:
COG1827"
/db_xref="CDD:32012"
misc_feature 15966..16127
/locus_tag="CD196_0012"
/note="HTH domain; Region: HTH_11; pfam08279"
/db_xref="CDD:116863"
misc_feature 16158..16454
/locus_tag="CD196_0012"
/note="3H domain; Region: 3H; pfam02829"
/db_xref="CDD:202419"
gene 16472..17353
/locus_tag="CD196_0013"
/db_xref="GeneID:8463289"
CDS 16472..17353
/locus_tag="CD196_0013"
/codon_start=1
/transl_table=11
/product="mechanosensitive ion channel protein"
/protein_id="YP_003213067.1"
/db_xref="GI:260681782"
/db_xref="GeneID:8463289"
/translation="MNFLSLAKAASTNSNITKRTLENMLNNFSDNIPNIIYAIIVFVI
GIYISKIVRKMVSRFLIKYGMSKGVNNFIVYGIYISMLSIISLISLGVIGIQTTSVVA
VLGAAGFSIGLAFKEILSNLGSGMIILFFKPFNIGDYIQGSGVEGTVSDIQIFSTVLK
TPDNKTIIIPNFQLTSNNIINYTHQNKRRIDFSYNISYDSDIDVVKSILNEIFINEKR
ILDDPKPIIGLNSIGNNTMQIVARPWVKTDDYWDVYFDVMEKVKNKFDENNIKVPFVP
SSLLFNNMSNSNTMDKR"
misc_feature 16757..17287
/locus_tag="CD196_0013"
/note="Mechanosensitive ion channel; Region: MS_channel;
pfam00924"
/db_xref="CDD:201506"
gene 17811..19082
/gene="serS1"
/locus_tag="CD196_0014"
/db_xref="GeneID:8463290"
CDS 17811..19082
/gene="serS1"
/locus_tag="CD196_0014"
/codon_start=1
/transl_table=11
/product="seryl-tRNA synthetase"
/protein_id="YP_003213068.1"
/db_xref="GI:260681783"
/db_xref="GeneID:8463290"
/translation="MLDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQE
VEVMKNELNVNSKKIPQLIKEGKDVTEEKTRLKELSDKIKGIDEKVKEVEAKMEYTLM
RIPNVPHPEVPQGETDEDNVQIRTWGEPTKFDFEYKAHWDIGTGLGILDFERAGKITG
SRFTLYRGLGARLERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDM
FKIEGLEYFLIPTAEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLV
RQHQFNKVELVKFVKPEDSYNELESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFK
YDLEVWMPSYNRYVEISSCSNFEDFQARRAGIRFKRDKKSKAEYVHTLNGSGLAIGRC
LAAILENYQQADGSVVVPEELRPYMGVDVIK"
misc_feature 17811..19079
/gene="serS1"
/locus_tag="CD196_0014"
/note="seryl-tRNA synthetase; Provisional; Region:
PRK05431"
/db_xref="CDD:180077"
misc_feature 17811..18134
/gene="serS1"
/locus_tag="CD196_0014"
/note="Seryl-tRNA synthetase N-terminal domain; Region:
Seryl_tRNA_N; pfam02403"
/db_xref="CDD:202232"
misc_feature 18168..19061
/gene="serS1"
/locus_tag="CD196_0014"
/note="Seryl-tRNA synthetase (SerRS) class II core
catalytic domain. SerRS is responsible for the attachment
of serine to the 3' OH group of ribose of the appropriate
tRNA. This domain It is primarily responsible for
ATP-dependent formation of the enzyme bound...; Region:
SerRS_core; cd00770"
/db_xref="CDD:29815"
misc_feature order(18270..18287,18294..18314,18324..18326,18330..18332,
18336..18338,18345..18347,18384..18395,18399..18407,
18411..18413,18465..18470,18474..18476,18486..18488,
18513..18515,18525..18527,18537..18539,18585..18587,
18648..18650,19056..19061)
/gene="serS1"
/locus_tag="CD196_0014"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29815"
misc_feature order(18291..18293,18501..18503,18507..18509,18594..18596,
18600..18602,18618..18620,18627..18629,18636..18638,
18642..18644,18651..18653,18657..18659,18663..18665,
18855..18866,18957..18959,18963..18965,18981..18983)
/gene="serS1"
/locus_tag="CD196_0014"
/note="active site"
/db_xref="CDD:29815"
misc_feature 18384..18407
/gene="serS1"
/locus_tag="CD196_0014"
/note="motif 1; other site"
/db_xref="CDD:29815"
misc_feature 18591..18602
/gene="serS1"
/locus_tag="CD196_0014"
/note="motif 2; other site"
/db_xref="CDD:29815"
misc_feature order(18966..18974,18981..18983)
/gene="serS1"
/locus_tag="CD196_0014"
/note="motif 3; other site"
/db_xref="CDD:29815"
gene 19402..19857
/locus_tag="CD196_0015"
/db_xref="GeneID:8466628"
CDS 19402..19857
/locus_tag="CD196_0015"
/codon_start=1
/transl_table=11
/product="cytosine/adenosine deaminase"
/protein_id="YP_003213069.1"
/db_xref="GI:260681784"
/db_xref="GeneID:8466628"
/translation="MESSFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTE
TLKDSTAHAEILAIKQASEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTR
HVKNSYIEKQHEFKLDYFNNNNVKVAFDVLQEECSIILQEFFKALRKRD"
misc_feature 19420..19710
/locus_tag="CD196_0015"
/note="Nucleoside deaminases include adenosine, guanine
and cytosine deaminases. These enzymes are Zn dependent
and catalyze the deamination of nucleosides. The zinc ion
in the active site plays a central role in the proposed
catalytic mechanism, activating a...; Region:
nucleoside_deaminase; cd01285"
/db_xref="CDD:29828"
misc_feature order(19474..19476,19522..19524,19555..19563,19645..19647,
19654..19656)
/locus_tag="CD196_0015"
/note="nucleoside/Zn binding site; other site"
/db_xref="CDD:29828"
misc_feature order(19549..19551,19564..19566,19576..19578,19648..19653,
19660..19665,19672..19677)
/locus_tag="CD196_0015"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29828"
misc_feature order(19555..19563,19642..19647,19654..19656)
/locus_tag="CD196_0015"
/note="catalytic motif [active]"
/db_xref="CDD:29828"
gene 19858..19946
/locus_tag="CD196_t002"
/db_xref="GeneID:8463291"
tRNA 19858..19946
/locus_tag="CD196_t002"
/product="tRNA-Ser"
/anticodon=(pos:19892..19894,aa:Ser,seq:gga)
/codon_recognized="UCC"
/db_xref="GeneID:8463291"
gene 20328..21965
/gene="dnaH"
/locus_tag="CD196_0016"
/db_xref="GeneID:8466799"
CDS 20328..21965
/gene="dnaH"
/locus_tag="CD196_0016"
/note="catalyzes the DNA-template-directed extension of
the 3'-end of a DNA strand; the tau chain serves as a
scaffold to help in the dimerizaton of the alpha,epsilon
and theta core complex; the gamma chain seems to interact
with the delta and delta' subunits to transfer the beta
subunit on the DNA"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunits gamma and tau"
/protein_id="YP_003213070.1"
/db_xref="GI:260681785"
/db_xref="GeneID:8466799"
/translation="MHKALYRAYRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCG
TRGTGKTSTAKIFSRAVNCLNKINEEPCNECEICESVLKDNTMDVVEIDAASNNSVDD
IRELRESVKYSPANAKYKVYIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHK
IPATILSRCQRYDFKRVTVKDMTLRMKKICEDEGIDIDDKALNLIARNSQGALRDALS
ILDQCMSFGESKIDYKDVVELMGSVNIEQLFELSQCIVEQDTKKSLEILNEFVLWGKD
IRNLINDLIDHFRNLMVCKVSSELDEIISLPEETIEQLKIQSKNIDINDLIRILNILS
ITQDDIKSSSNPRVLVEITIMKIAQPMFDESKEALIKRVENLEKMIELGNFKSEKIGN
NKEKEYEVDREIDVKQENVVYEDVKNEDVILIESSWKNILKQIKKDKKMPIYALLSEV
KSFNVYSNMLYVIFDDKFDFAKTRLSSQDTINYLEKTIRDVLNRSFNVKIVLTSEVKD
INLEVKEKKDIGEEILKNIVSEEILEIKYSIDENESK"
misc_feature 20328..21935
/gene="dnaH"
/locus_tag="CD196_0016"
/note="DNA polymerase III subunits gamma and tau;
Validated; Region: PRK05563"
/db_xref="CDD:180131"
misc_feature 20379..20840
/gene="dnaH"
/locus_tag="CD196_0016"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 20457..20480
/gene="dnaH"
/locus_tag="CD196_0016"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(20460..20483,20700..20702,20793..20795)
/gene="dnaH"
/locus_tag="CD196_0016"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 20688..20705
/gene="dnaH"
/locus_tag="CD196_0016"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 20829..20831
/gene="dnaH"
/locus_tag="CD196_0016"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 21018..21446
/gene="dnaH"
/locus_tag="CD196_0016"
/note="DNA polymerase III subunits gamma and tau domain
III; Region: DNA_pol3_gamma3; pfam12169"
/db_xref="CDD:152604"
gene 22024..22374
/locus_tag="CD196_0017"
/db_xref="GeneID:8466024"
CDS 22024..22374
/locus_tag="CD196_0017"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213071.1"
/db_xref="GI:260681786"
/db_xref="GeneID:8466024"
/translation="MAKKGFGGGMMPGGGNMNNLLKQAQKMQENMQKAQQELESKEVE
ASVGGGAVTVKVNGKKEVIDITIKPEVVDPDDIEMLQDLVLSAVNQALRNIDDIQASQ
MSKVTGGMNIPGLF"
misc_feature 22081..22371
/locus_tag="CD196_0017"
/note="hypothetical protein; Validated; Region: PRK00153"
/db_xref="CDD:178904"
gene 22387..22986
/gene="recD"
/locus_tag="CD196_0018"
/db_xref="GeneID:8463292"
CDS 22387..22986
/gene="recD"
/locus_tag="CD196_0018"
/codon_start=1
/transl_table=11
/product="recombination protein"
/protein_id="YP_003213072.1"
/db_xref="GI:260681787"
/db_xref="GeneID:8463292"
/translation="MQVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEAL
SKAIIDAKREIRYCSICCNITDTDPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFK
GQYHVLNGVISPMDGIGPDMLKIKELIQRLGNQEVKEIIMATNPTIEGEATAMYIARL
VKPMGIKVTRIAHGLPVGGDLEYADEVTISKALEGRREI"
misc_feature 22396..22983
/gene="recD"
/locus_tag="CD196_0018"
/note="recombination protein RecR; Reviewed; Region: recR;
PRK00076"
/db_xref="CDD:178844"
misc_feature 22504..22623
/gene="recD"
/locus_tag="CD196_0018"
/note="RecR protein; Region: RecR; pfam02132"
/db_xref="CDD:202123"
misc_feature 22627..22962
/gene="recD"
/locus_tag="CD196_0018"
/note="TOPRIM_recR: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in Escherichia coli RecR. RecR participates in the RecFOR
pathway of homologous recombinational repair in
prokaryotes. This pathway provides a...; Region:
TOPRIM_recR; cd01025"
/db_xref="CDD:173775"
misc_feature order(22645..22650,22657..22659,22819..22821,22825..22827,
22831..22833)
/gene="recD"
/locus_tag="CD196_0018"
/note="putative active site [active]"
/db_xref="CDD:173775"
misc_feature order(22645..22647,22819..22821)
/gene="recD"
/locus_tag="CD196_0018"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173775"
misc_feature order(22663..22671,22675..22680,22801..22803,22807..22809,
22813..22815,22822..22824,22858..22860,22888..22923,
22927..22929,22942..22944,22948..22950,22954..22962)
/gene="recD"
/locus_tag="CD196_0018"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:173775"
gene complement(23419..24624)
/locus_tag="CD196_0019"
/db_xref="GeneID:8466514"
CDS complement(23419..24624)
/locus_tag="CD196_0019"
/codon_start=1
/transl_table=11
/product="glycosyl transferase"
/protein_id="YP_003213073.1"
/db_xref="GI:260681788"
/db_xref="GeneID:8466514"
/translation="MSKKVLIMSASTGGGHNRAALAIKEELTSKTLDGEPIECEIIDS
LKLVNNTMDKIISRGYEKSAIYTPKAYGSVYRLSETNLLSKNEFKDNLLITFMAKKFK
KLIRSEKPDLIIGTHPFPMIALSTLKKNFNLHNNESNAYTEHFYKHYTNTINVPPLIS
VLTDYTTHSTWIQNEIDYYIVGHEYVKELLVFDGVGPSKIRTFGIPVEKSFLSHRDKD
IVLSELNLSPDKLTVLLMGGSFGAGNIKETLDELLDTDRDFQILVITGKNESLKEKIE
KKLMSRYHDKNVCVLGYTDKMNDILASIDVLVSKPGGLTTTEALLKDVPMIVPYYIPG
QEEENLDFLSNCGAALRTTKKYNLSILLKVLIDDPSRLEMLKRNVKSIRKSNSAQNIA
NLILNIISG"
misc_feature complement(23470..24618)
/locus_tag="CD196_0019"
/note="diacylglycerol glucosyltransferase; Provisional;
Region: PRK13609"
/db_xref="CDD:184180"
misc_feature complement(24004..24579)
/locus_tag="CD196_0019"
/note="Monogalactosyldiacylglycerol (MGDG) synthase;
Region: MGDG_synth; pfam06925"
/db_xref="CDD:191643"
misc_feature complement(<23635..23931)
/locus_tag="CD196_0019"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region:
Glycosyltransferase_GTB_type; cl10013"
/db_xref="CDD:214166"
gene 25043..26821
/gene="16SrRNA"
/locus_tag="CD196_r01"
/db_xref="GeneID:8463293"
rRNA 25043..26821
/gene="16SrRNA"
/locus_tag="CD196_r01"
/product="16S ribosomal RNA"
/db_xref="GeneID:8463293"
gene 26918..29868
/gene="23SrRNA"
/locus_tag="CD196_r02"
/db_xref="GeneID:8465769"
rRNA 26918..29868
/gene="23SrRNA"
/locus_tag="CD196_r02"
/product="23S ribosomal RNA"
/db_xref="GeneID:8465769"
gene 29997..30113
/gene="5SrRNA"
/locus_tag="CD196_r03"
/db_xref="GeneID:8465779"
rRNA 29997..30113
/gene="5SrRNA"
/locus_tag="CD196_r03"
/product="5S ribosomal RNA"
/db_xref="GeneID:8465779"
gene 30120..30191
/locus_tag="CD196_t003"
/db_xref="GeneID:8465789"
tRNA 30120..30191
/locus_tag="CD196_t003"
/product="tRNA-Asn"
/anticodon=(pos:30152..30154,aa:Asn,seq:gtt)
/codon_recognized="AAC"
/db_xref="GeneID:8465789"
gene 30201..30286
/locus_tag="CD196_t004"
/db_xref="GeneID:8466800"
tRNA 30201..30286
/locus_tag="CD196_t004"
/product="tRNA-Leu"
/anticodon=(pos:30235..30237,aa:Leu,seq:taa)
/codon_recognized="UUA"
/db_xref="GeneID:8466800"
gene 30302..30374
/locus_tag="CD196_t005"
/db_xref="GeneID:8466801"
tRNA 30302..30374
/locus_tag="CD196_t005"
/product="tRNA-Met"
/anticodon=(pos:30335..30337,aa:Met,seq:cat)
/codon_recognized="AUG"
/db_xref="GeneID:8466801"
gene 30385..30456
/locus_tag="CD196_t006"
/db_xref="GeneID:8466802"
tRNA 30385..30456
/locus_tag="CD196_t006"
/product="tRNA-Glu"
/anticodon=(pos:30418..30420,aa:Glu,seq:ttc)
/codon_recognized="GAA"
/db_xref="GeneID:8466802"
gene 30469..30539
/locus_tag="CD196_t007"
/db_xref="GeneID:8466803"
tRNA 30469..30539
/locus_tag="CD196_t007"
/product="tRNA-Gly"
/anticodon=(pos:30501..30503,aa:Gly,seq:tcc)
/codon_recognized="GGA"
/db_xref="GeneID:8466803"
gene 30548..30620
/locus_tag="CD196_t008"
/db_xref="GeneID:8466804"
tRNA 30548..30620
/locus_tag="CD196_t008"
/product="tRNA-Val"
/anticodon=(pos:30581..30583,aa:Val,seq:tac)
/codon_recognized="GUA"
/db_xref="GeneID:8466804"
gene 30629..30702
/locus_tag="CD196_t009"
/db_xref="GeneID:8466805"
tRNA 30629..30702
/locus_tag="CD196_t009"
/product="tRNA-Asp"
/anticodon=(pos:30663..30665,aa:Asp,seq:gtc)
/codon_recognized="GAC"
/db_xref="GeneID:8466805"
gene 30715..30786
/locus_tag="CD196_t010"
/db_xref="GeneID:8466806"
tRNA 30715..30786
/locus_tag="CD196_t010"
/product="tRNA-Thr"
/anticodon=(pos:30747..30749,aa:Thr,seq:tgt)
/codon_recognized="ACA"
/db_xref="GeneID:8466806"
gene 30804..30885
/locus_tag="CD196_t011"
/db_xref="GeneID:8466807"
tRNA 30804..30885
/locus_tag="CD196_t011"
/product="tRNA-Tyr"
/anticodon=(pos:30838..30840,aa:Tyr,seq:gta)
/codon_recognized="UAC"
/db_xref="GeneID:8466807"
gene 30897..30977
/locus_tag="CD196_t012"
/db_xref="GeneID:8466808"
tRNA 30897..30977
/locus_tag="CD196_t012"
/product="tRNA-Leu"
/anticodon=(pos:30931..30933,aa:Leu,seq:tag)
/codon_recognized="CUA"
/db_xref="GeneID:8466808"
gene 31010..31083
/locus_tag="CD196_t013"
/db_xref="GeneID:8466809"
tRNA 31010..31083
/locus_tag="CD196_t013"
/product="tRNA-Arg"
/anticodon=(pos:31044..31046,aa:Arg,seq:tct)
/codon_recognized="AGA"
/db_xref="GeneID:8466809"
gene 31094..31166
/locus_tag="CD196_t014"
/db_xref="GeneID:8466810"
tRNA 31094..31166
/locus_tag="CD196_t014"
/product="tRNA-Gln"
/anticodon=(pos:31127..31129,aa:Gln,seq:ttg)
/codon_recognized="CAA"
/db_xref="GeneID:8466810"
gene 31258..31343
/locus_tag="CD196_t015"
/db_xref="GeneID:8466811"
tRNA 31258..31343
/locus_tag="CD196_t015"
/product="tRNA-Ser"
/anticodon=(pos:31292..31294,aa:Ser,seq:tga)
/codon_recognized="UCA"
/db_xref="GeneID:8466811"
gene 31350..31422
/locus_tag="CD196_t016"
/db_xref="GeneID:8466812"
tRNA 31350..31422
/locus_tag="CD196_t016"
/product="tRNA-Phe"
/anticodon=(pos:31383..31385,aa:Phe,seq:gaa)
/codon_recognized="UUC"
/db_xref="GeneID:8466812"
gene 31432..31505
/locus_tag="CD196_t017"
/db_xref="GeneID:8466813"
tRNA 31432..31505
/locus_tag="CD196_t017"
/product="tRNA-Met"
/anticodon=(pos:31466..31468,aa:Met,seq:cat)
/codon_recognized="AUG"
/db_xref="GeneID:8466813"
gene 31520..31593
/locus_tag="CD196_t018"
/db_xref="GeneID:8466814"
tRNA 31520..31593
/locus_tag="CD196_t018"
/product="tRNA-Met"
/anticodon=(pos:31554..31556,aa:Met,seq:cat)
/codon_recognized="AUG"
/db_xref="GeneID:8466814"
gene 31620..31693
/locus_tag="CD196_t019"
/db_xref="GeneID:8466815"
tRNA 31620..31693
/locus_tag="CD196_t019"
/product="tRNA-Pro"
/anticodon=(pos:31654..31656,aa:Pro,seq:tgg)
/codon_recognized="CCA"
/db_xref="GeneID:8466815"
gene 31704..31777
/locus_tag="CD196_t020"
/db_xref="GeneID:8466816"
tRNA 31704..31777
/locus_tag="CD196_t020"
/product="tRNA-His"
/anticodon=(pos:31738..31740,aa:His,seq:gtg)
/codon_recognized="CAC"
/db_xref="GeneID:8466816"
gene 31789..31861
/locus_tag="CD196_t021"
/db_xref="GeneID:8466817"
tRNA 31789..31861
/locus_tag="CD196_t021"
/product="tRNA-Lys"
/anticodon=(pos:31822..31824,aa:Lys,seq:ttt)
/codon_recognized="AAA"
/db_xref="GeneID:8466817"
gene 31872..31942
/locus_tag="CD196_t022"
/db_xref="GeneID:8466818"
tRNA 31872..31942
/locus_tag="CD196_t022"
/product="tRNA-Cys"
/anticodon=(pos:31904..31906,aa:Cys,seq:gca)
/codon_recognized="UGC"
/db_xref="GeneID:8466818"
gene 31952..32023
/locus_tag="CD196_t023"
/db_xref="GeneID:8466819"
tRNA 31952..32023
/locus_tag="CD196_t023"
/product="tRNA-Asn"
/anticodon=(pos:31984..31986,aa:Asn,seq:gtt)
/codon_recognized="AAC"
/db_xref="GeneID:8466819"
gene 32032..32117
/locus_tag="CD196_t024"
/db_xref="GeneID:8466820"
tRNA 32032..32117
/locus_tag="CD196_t024"
/product="tRNA-Leu"
/anticodon=(pos:32066..32068,aa:Leu,seq:taa)
/codon_recognized="UUA"
/db_xref="GeneID:8466820"
gene 32133..32205
/locus_tag="CD196_t025"
/db_xref="GeneID:8466821"
tRNA 32133..32205
/locus_tag="CD196_t025"
/product="tRNA-Met"
/anticodon=(pos:32166..32168,aa:Met,seq:cat)
/codon_recognized="AUG"
/db_xref="GeneID:8466821"
gene 32216..32287
/locus_tag="CD196_t026"
/db_xref="GeneID:8466822"
tRNA 32216..32287
/locus_tag="CD196_t026"
/product="tRNA-Glu"
/anticodon=(pos:32249..32251,aa:Glu,seq:ttc)
/codon_recognized="GAA"
/db_xref="GeneID:8466822"
gene 32300..32370
/locus_tag="CD196_t027"
/db_xref="GeneID:8466823"
tRNA 32300..32370
/locus_tag="CD196_t027"
/product="tRNA-Gly"
/anticodon=(pos:32332..32334,aa:Gly,seq:tcc)
/codon_recognized="GGA"
/db_xref="GeneID:8466823"
gene 32379..32451
/locus_tag="CD196_t028"
/db_xref="GeneID:8466824"
tRNA 32379..32451
/locus_tag="CD196_t028"
/product="tRNA-Val"
/anticodon=(pos:32412..32414,aa:Val,seq:tac)
/codon_recognized="GUA"
/db_xref="GeneID:8466824"
gene 32460..32533
/locus_tag="CD196_t029"
/db_xref="GeneID:8466825"
tRNA 32460..32533
/locus_tag="CD196_t029"
/product="tRNA-Asp"
/anticodon=(pos:32494..32496,aa:Asp,seq:gtc)
/codon_recognized="GAC"
/db_xref="GeneID:8466825"
gene 32546..32617
/locus_tag="CD196_t030"
/db_xref="GeneID:8466826"
tRNA 32546..32617
/locus_tag="CD196_t030"
/product="tRNA-Thr"
/anticodon=(pos:32578..32580,aa:Thr,seq:tgt)
/codon_recognized="ACA"
/db_xref="GeneID:8466826"
gene 32635..32716
/locus_tag="CD196_t031"
/db_xref="GeneID:8466827"
tRNA 32635..32716
/locus_tag="CD196_t031"
/product="tRNA-Tyr"
/anticodon=(pos:32669..32671,aa:Tyr,seq:gta)
/codon_recognized="UAC"
/db_xref="GeneID:8466827"
gene 32729..32809
/locus_tag="CD196_t032"
/db_xref="GeneID:8466828"
tRNA 32729..32809
/locus_tag="CD196_t032"
/product="tRNA-Leu"
/anticodon=(pos:32763..32765,aa:Leu,seq:tag)
/codon_recognized="CUA"
/db_xref="GeneID:8466828"
gene 32836..32907
/locus_tag="CD196_t033"
/db_xref="GeneID:8466829"
tRNA 32836..32907
/locus_tag="CD196_t033"
/product="tRNA-Gly"
/anticodon=(pos:32868..32870,aa:Gly,seq:gcc)
/codon_recognized="GGC"
/db_xref="GeneID:8466829"
gene 32935..33008
/locus_tag="CD196_t034"
/db_xref="GeneID:8466830"
tRNA 32935..33008
/locus_tag="CD196_t034"
/product="tRNA-Arg"
/anticodon=(pos:32969..32971,aa:Arg,seq:tct)
/codon_recognized="AGA"
/db_xref="GeneID:8466830"
gene 33021..33093
/locus_tag="CD196_t035"
/db_xref="GeneID:8466831"
tRNA 33021..33093
/locus_tag="CD196_t035"
/product="tRNA-Gln"
/anticodon=(pos:33054..33056,aa:Gln,seq:ttg)
/codon_recognized="CAA"
/db_xref="GeneID:8466831"
gene 33105..33177
/locus_tag="CD196_t036"
/db_xref="GeneID:8466832"
tRNA 33105..33177
/locus_tag="CD196_t036"
/product="tRNA-Lys"
/anticodon=(pos:33138..33140,aa:Lys,seq:ttt)
/codon_recognized="AAA"
/db_xref="GeneID:8466832"
gene 33183..33268
/locus_tag="CD196_t037"
/db_xref="GeneID:8466833"
tRNA 33183..33268
/locus_tag="CD196_t037"
/product="tRNA-Ser"
/anticodon=(pos:33217..33219,aa:Ser,seq:tga)
/codon_recognized="UCA"
/db_xref="GeneID:8466833"
gene 33275..33347
/locus_tag="CD196_t038"
/db_xref="GeneID:8466834"
tRNA 33275..33347
/locus_tag="CD196_t038"
/product="tRNA-Phe"
/anticodon=(pos:33308..33310,aa:Phe,seq:gaa)
/codon_recognized="UUC"
/db_xref="GeneID:8466834"
gene 33357..33430
/locus_tag="CD196_t039"
/db_xref="GeneID:8466835"
tRNA 33357..33430
/locus_tag="CD196_t039"
/product="tRNA-Met"
/anticodon=(pos:33391..33393,aa:Met,seq:cat)
/codon_recognized="AUG"
/db_xref="GeneID:8466835"
gene 33445..33518
/locus_tag="CD196_t040"
/db_xref="GeneID:8466836"
tRNA 33445..33518
/locus_tag="CD196_t040"
/product="tRNA-Met"
/anticodon=(pos:33479..33481,aa:Met,seq:cat)
/codon_recognized="AUG"
/db_xref="GeneID:8466836"
gene 33539..33612
/locus_tag="CD196_t041"
/db_xref="GeneID:8466837"
tRNA 33539..33612
/locus_tag="CD196_t041"
/product="tRNA-His"
/anticodon=(pos:33573..33575,aa:His,seq:gtg)
/codon_recognized="CAC"
/db_xref="GeneID:8466837"
gene 33624..33696
/locus_tag="CD196_t042"
/db_xref="GeneID:8466838"
tRNA 33624..33696
/locus_tag="CD196_t042"
/product="tRNA-Lys"
/anticodon=(pos:33657..33659,aa:Lys,seq:ttt)
/codon_recognized="AAA"
/db_xref="GeneID:8466838"
gene 33707..33777
/locus_tag="CD196_t043"
/db_xref="GeneID:8466839"
tRNA 33707..33777
/locus_tag="CD196_t043"
/product="tRNA-Cys"
/anticodon=(pos:33739..33741,aa:Cys,seq:gca)
/codon_recognized="UGC"
/db_xref="GeneID:8466839"
gene 33788..33861
/locus_tag="CD196_t044"
/db_xref="GeneID:8466840"
tRNA 33788..33861
/locus_tag="CD196_t044"
/product="tRNA-Arg"
/anticodon=(pos:33822..33824,aa:Arg,seq:acg)
/codon_recognized="CGU"
/db_xref="GeneID:8466840"
gene 33877..33949
/locus_tag="CD196_t045"
/db_xref="GeneID:8466841"
tRNA 33877..33949
/locus_tag="CD196_t045"
/product="tRNA-Val"
/anticodon=(pos:33910..33912,aa:Val,seq:tac)
/codon_recognized="GUA"
/db_xref="GeneID:8466841"
gene 34028..34441
/locus_tag="CD196_0021"
/db_xref="GeneID:8466842"
CDS 34028..34441
/locus_tag="CD196_0021"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213074.1"
/db_xref="GI:260681789"
/db_xref="GeneID:8466842"
/translation="MYIVIGNEIVDSEELKIIIDENSKFKVEKDLSKSTKREDVIAYQ
LSIDLNYLDSLINEQCNLSSLSDEEKFDEYMTLSDELALDLEELMPKYTIINARAYKL
DEVDGIVKIILAVAYADLGHLKLSDVVKRLSRQVD"
gene 34750..38181
/gene="pyc"
/locus_tag="CD196_0022"
/db_xref="GeneID:8463294"
CDS 34750..38181
/gene="pyc"
/locus_tag="CD196_0022"
/note="biotin-containing enzyme that catalyzes a two step
carboxylation of pyruvate to oxaloacetate"
/codon_start=1
/transl_table=11
/product="pyruvate carboxylase"
/protein_id="YP_003213075.1"
/db_xref="GI:260681790"
/db_xref="GeneID:8463294"
/translation="MLKKFNKILVANRGEIAIRIFRACSELGIKSVGIYSKEDKYGLF
RTKADESYLIGEGKGPIDAYLDMDGIIDLAKRKKVDAIHPGYGFLAENAEFARKCEEN
GITFIGPSSKVMNMMGDKINSKKIAKEVNVQTIPGVEKAIRSTEEAKEVANKIGYPVM
IKASNGGGGRGMRIVHREEDLELEYETACSESRKAFGEDIIFIEKYIADPKHIEVQIL
GDNYGNIVHLYERDCSVQRRHQKIIEYAPAFSLDDKVRKEICEDAVKLSKHVGYSNAG
TLEFLVDANGGHYFIEMNTRVQVEHTVTEMVTGIDIVQSQILIAQGYSLDSEEINIKS
QDDVEIRGYSIQCRITTEDPKNKFMPDTGKIQVYRTGSGFGIRLDGGNGFTGANISPH
YDSLLVKTISWDRTFQGAINKTIRSIKELRVRGVKTNVGFLVNVLNNPIFSNGKCSTK
FIDENPDLFEITESKDRGTKLLQFIGDVIVNDNACKEKPLFDALHDPRMDKDGSKSEG
SKILFDKLGKSAYIEKIKNDKKLLLTDTTMRDAHQSLLATRIRTYDLLKAAKPTEKYQ
KDLFSLEMWGGATYDVAYRFLKESPWRRLQKLREEIPSIMFQMLLRASNGVGYKNYPD
NVIEEFTKESARQGIDVFRIFDSLNWVENMKPSINTALETGKIVEATMCYTGDILDKT
KTKYNLEYYIKMAQELESLGADIIAIKDMSGLLKPYSAYTLVKELKKNVKAPIHLHTH
DTSGNGVATCLMASEAGVDIIDAALESMAGLTSQPSLNAIVEALKNTERDTGIDLFGY
DELGKYYKDLRKVYNKFESDLTNSCAEIYNFEIPGGQYTNLKPQADSLGLVNRFDEVK
EKYKEANEVVGDIIKVTPSSKVVGDLAIFMTKNKLDKDNIIEEGKNLSFPDSVVDYCK
GMIGQPEGGIPKDLQEVVLKGEEAITVRPGSLLPAEDFDEIAKYLNEKYDINANIRNV
ISYALYPKVYEDYIKHLQHYNDISKLESDVFFYGLNKNEECEVEIEEGKVLTIRLVEI
GEVKENGFRTIGFELNGMVREVEIKDKNFSGKINNVEKADMNDPLQIGASIPGKVIKI
MVKEEDEVKANQPLIVIEAMKMETIIVAKTDGVIKSIKVKEDDMVEDKQLLMIMK"
misc_feature 34750..38178
/gene="pyc"
/locus_tag="CD196_0022"
/note="pyruvate carboxylase; Reviewed; Region: PRK12999"
/db_xref="CDD:183835"
misc_feature 34762..35088
/gene="pyc"
/locus_tag="CD196_0022"
/note="Carbamoyl-phosphate synthase L chain, N-terminal
domain; Region: CPSase_L_chain; pfam00289"
/db_xref="CDD:201133"
misc_feature 35104..35640
/gene="pyc"
/locus_tag="CD196_0022"
/note="ATP-grasp domain; Region: ATP-grasp_4; pfam13535"
/db_xref="CDD:205713"
misc_feature 35785..36108
/gene="pyc"
/locus_tag="CD196_0022"
/note="Biotin carboxylase C-terminal domain; Region:
Biotin_carb_C; smart00878"
/db_xref="CDD:197946"
misc_feature 36346..37194
/gene="pyc"
/locus_tag="CD196_0022"
/note="Pyruvate carboxylase and Transcarboxylase 5S,
carboxyltransferase domain; Region: DRE_TIM_PC_TC_5S;
cd07937"
/db_xref="CDD:163675"
misc_feature order(36364..36369,36376..36378,36466..36468,36478..36480,
36577..36579,36583..36585,36766..36768,36874..36876,
36961..36963,36967..36969,37069..37071)
/gene="pyc"
/locus_tag="CD196_0022"
/note="active site"
/db_xref="CDD:163675"
misc_feature order(36364..36369,36466..36468)
/gene="pyc"
/locus_tag="CD196_0022"
/note="catalytic residues [active]"
/db_xref="CDD:163675"
misc_feature order(36367..36369,36874..36876,36961..36963,36967..36969)
/gene="pyc"
/locus_tag="CD196_0022"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163675"
misc_feature order(36895..36897,36901..36903,36976..36978,36982..36984,
36988..36990,37000..37005,37045..37050,37054..37056,
37084..37086,37102..37104,37144..37146)
/gene="pyc"
/locus_tag="CD196_0022"
/note="homodimer binding site [polypeptide binding]; other
site"
/db_xref="CDD:163675"
misc_feature 37975..38175
/gene="pyc"
/locus_tag="CD196_0022"
/note="The biotinyl-domain or biotin carboxyl carrier
protein (BCCP) domain is present in all biotin-dependent
enzymes, such as acetyl-CoA carboxylase, pyruvate
carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
carboxylase, geranyl-CoA carboxylase; Region:
biotinyl_domain; cd06850"
/db_xref="CDD:133459"
misc_feature order(38044..38046,38071..38079,38098..38100)
/gene="pyc"
/locus_tag="CD196_0022"
/note="carboxyltransferase (CT) interaction site; other
site"
/db_xref="CDD:133459"
misc_feature 38074..38076
/gene="pyc"
/locus_tag="CD196_0022"
/note="biotinylation site [posttranslational
modification]; other site"
/db_xref="CDD:133459"
gene 38423..40351
/locus_tag="CD196_0023"
/db_xref="GeneID:8466485"
CDS 38423..40351
/locus_tag="CD196_0023"
/codon_start=1
/transl_table=11
/product="translation elongation factor"
/protein_id="YP_003213076.1"
/db_xref="GI:260681791"
/db_xref="GeneID:8466485"
/translation="MKVYDSKMLRNVAVLGHSGCGKTNLIETIAYTANTNKIPKLTDK
VNMTYSMGLIPIEYNDYKFNLLDTPGYFDFSGDVVSSLRASDAAIIVIDATAPIQVGT
EKSLELTESIPKIMFINKIDNEKARYKDAIAMLREKYNNKIVPMISPIYKDKNFVKLH
NVFENIDDLEGEFKEQAMSVKEALMELIAETDDQILDKYFNGEELTTEEIQKGIIIGI
QRGDIIPVICGSTINNIGTKEILDTISSYLEPIFTEESKPFRGLVFKTMVDPFVGKMS
YIKITEGVLSKDKDVFNINKNVKEKIANIYTLRNSELVEIEKAKAGDIVVITKVNSLK
TGDTISADKDAEALEKIDFPKPQIYYAVTPKNKGDEEKVASVLNKLVEEDPTLHWYRN
TETKQALLGGQGELHIKTIKNKMKDKFGVDVELNDLKVPYRETIKGTADVQGKHKKQS
GGHGQYGDVKIRFERCESDFEFTEEIFGGSVPKQYIPAVEKGLKDSMQKGILAGYPVT
NIKATLYDGSYHDVDSSEMAFKMAASAAFKKGMEEAHPILLEPIMKLKITVPEEYMGD
VMGDINKRRGKIFGMEPDDKGKQIIFAEAPQAETFKYAIDLRAMTQGRGYFEMELERY
GEVPSQFAEKIIGLATAK"
misc_feature 38453..39166
/locus_tag="CD196_0023"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
misc_feature 38465..40330
/locus_tag="CD196_0023"
/note="elongation factor G; Reviewed; Region: PRK12740"
/db_xref="CDD:183713"
misc_feature 38468..38491
/locus_tag="CD196_0023"
/note="G1 box; other site"
/db_xref="CDD:206648"
misc_feature order(38474..38494,38630..38632,38777..38782,38786..38788,
39110..39118)
/locus_tag="CD196_0023"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206648"
misc_feature 38561..38563
/locus_tag="CD196_0023"
/note="G2 box; other site"
/db_xref="CDD:206648"
misc_feature 38576..38584
/locus_tag="CD196_0023"
/note="Switch I region; other site"
/db_xref="CDD:206648"
misc_feature 38621..38632
/locus_tag="CD196_0023"
/note="G3 box; other site"
/db_xref="CDD:206648"
misc_feature order(38627..38632,38678..38683)
/locus_tag="CD196_0023"
/note="Switch II region; other site"
/db_xref="CDD:206648"
misc_feature 38777..38788
/locus_tag="CD196_0023"
/note="G4 box; other site"
/db_xref="CDD:206648"
misc_feature 39110..39118
/locus_tag="CD196_0023"
/note="G5 box; other site"
/db_xref="CDD:206648"
misc_feature 39197..39442
/locus_tag="CD196_0023"
/note="EFG_mtEFG_II: this subfamily represents the domain
II of elongation factor G (EF-G) in bacteria and, the
C-terminus of mitochondrial Elongation factor G1 (mtEFG1)
and G2 (mtEFG2)_like proteins found in eukaryotes. During
the process of peptide synthesis...; Region: EFG_mtEFG_II;
cd04088"
/db_xref="CDD:58095"
misc_feature 39716..39991
/locus_tag="CD196_0023"
/note="Elongation Factor G-like domain IV. This family
includes the translational elongation factor termed EF-2
(for Archaea and Eukarya) and EF-G (for Bacteria),
ribosomal protection proteins that mediate tetracycline
resistance and, an evolutionarily...; Region: EFG_like_IV;
cl02789"
/db_xref="CDD:207734"
misc_feature 40070..40306
/locus_tag="CD196_0023"
/note="EFG_mtEFG_C: domains similar to the C-terminal
domain of the bacterial translational elongation factor
(EF) EF-G. Included in this group is the C-terminus of
mitochondrial Elongation factor G1 (mtEFG1) and G2
(mtEFG2) proteins. Eukaryotic cells harbor 2...; Region:
EFG_mtEFG_C; cd03713"
/db_xref="CDD:58065"
gene 40804..41268
/gene="ctsR"
/locus_tag="CD196_0024"
/db_xref="GeneID:8463295"
CDS 40804..41268
/gene="ctsR"
/locus_tag="CD196_0024"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_003213077.1"
/db_xref="GI:260681792"
/db_xref="GeneID:8463295"
/translation="MATMTDIIEKFIKDLMEEDNSIQIQRNELANLFSCAPSQINYVL
TTRFTIDRGYYIESKKGGGGYVQIEKIRKSKDGHIRELLNEKIGSQISYKKAKELLEG
LKESDLINERELKLILYAIDDKSLCMPIYELKEKVRSNILKNIIIGLFSIEE"
misc_feature 40807..41253
/gene="ctsR"
/locus_tag="CD196_0024"
/note="Firmicute transcriptional repressor of class III
stress genes (CtsR); Region: CtsR; pfam05848"
/db_xref="CDD:147806"
gene 41275..41769
/locus_tag="CD196_0025"
/db_xref="GeneID:8465984"
CDS 41275..41769
/locus_tag="CD196_0025"
/codon_start=1
/transl_table=11
/product="DNA repair protein"
/protein_id="YP_003213078.1"
/db_xref="GI:260681793"
/db_xref="GeneID:8465984"
/translation="MLCQKCNKNKASVYYNKIVNGEKTEMYLCSECAKENTEMNFNLD
MPFSMMDIFSNLGFQPKKELEEKLVCPKCNTTYSEFKNNGRFGCSECYNAFSSQVNPM
LQNIHGHIEHTGKAPKKSFYKISVENEIKELKEDLDRAIKNEEYELAAQFRDKIKYLK
GSID"
misc_feature 41275..41754
/locus_tag="CD196_0025"
/note="Modulator of heat shock repressor CtsR, McsA
[Signal transduction mechanisms]; Region: COG3880"
/db_xref="CDD:33669"
misc_feature 41653..41754
/locus_tag="CD196_0025"
/note="UvrB/uvrC motif; Region: UVR; pfam02151"
/db_xref="CDD:145355"
gene 41785..42810
/locus_tag="CD196_0026"
/db_xref="GeneID:8463296"
CDS 41785..42810
/locus_tag="CD196_0026"
/codon_start=1
/transl_table=11
/product="ATP:guanido phosphotransferase"
/protein_id="YP_003213079.1"
/db_xref="GI:260681794"
/db_xref="GeneID:8463296"
/translation="MKENIVMKSRVRLARNLNNYPFPNKLDKECAMEIIEKVKNAFIN
SNLEQKEEFDFYKIEDLDQSKKMLMVEEHIISPDLAENDKSAVIVKKDKTISIMINEE
DHIRIQTICDDLNLEYAYSVANEIDDLLESSLEYAFNTKLGYLTSCPTNTGTGMRASV
MMHLPALSQLGYMDELYKISSQIGIAIRGIYGERTEALGNIYQISNQLTLGRTESNII
ENVSGLTKDAISKEIKAREILQKKLGIKLEDKIFRSIGTLENSRVMSSAEAMSHLSNI
KMGIEMNYIDKLDLRAIEQLMIGIQPAHQSIMYKSDDVENRDINRATYIRETLEKLRG
GMNCELQ"
misc_feature 41788..42768
/locus_tag="CD196_0026"
/note="ATP:guanido phosphotransferase; Provisional;
Region: PRK01059"
/db_xref="CDD:179213"
misc_feature 41791..42489
/locus_tag="CD196_0026"
/note="Phosphagen (guanidino) kinases found in bacteria;
Region: bacterial_phosphagen_kinase; cd07930"
/db_xref="CDD:153077"
misc_feature order(41806..41808,41812..41814,41818..41820,42001..42003,
42076..42078,42100..42102,42253..42255,42259..42267,
42346..42348,42352..42354,42358..42363,42391..42393)
/locus_tag="CD196_0026"
/note="ADP binding site [chemical binding]; other site"
/db_xref="CDD:153077"
misc_feature order(42088..42090,42226..42228,42364..42369)
/locus_tag="CD196_0026"
/note="phosphagen binding site; other site"
/db_xref="CDD:153077"
misc_feature order(42337..42381,42385..42402)
/locus_tag="CD196_0026"
/note="substrate specificity loop; other site"
/db_xref="CDD:153077"
gene 42995..45244
/gene="clpC"
/locus_tag="CD196_0027"
/db_xref="GeneID:8463297"
CDS 42995..45244
/gene="clpC"
/locus_tag="CD196_0027"
/codon_start=1
/transl_table=11
/product="ATP-dependent Clp protease"
/protein_id="YP_003213080.1"
/db_xref="GI:260681795"
/db_xref="GeneID:8463297"
/translation="MEGKGEEISEDIVLSPRSKQILELSGMFANKLKTNYIGTEHILL
AIIQEGEGIANKILNYAGVNDRTLAQLTIDMMGISDKNQYKAENSYTGNQNQAESKVL
DKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTKNNPVLIGDPGVGKTAIAEGL
ATNIALGNVPETLKNKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVVKNGNIILFID
EMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGATTIDEYRKHVEKDSALERRFQP
VMVDEPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLPDKAIDL
IDEAASKVRLKENTPPSEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGLLKKQ
LEDVRERWNKSSKHSDLVDGEVIAEVVGLWTGIPVNKILEEEADRLLRLEEILHNRVI
GQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQFGDENQI
IRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKAHPDVF
NILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTIGRQKTLGFSIAKGDEEEKSQ
YEKMKENIMGELKQRFRPEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERLKEMDI
KLEMSDEAVKLISKSGFDLEYGARPLKRALQKELEDELSEAILKGNVKKGSNVVAKVK
DEKIVFETK"
misc_feature 43001..45241
/gene="clpC"
/locus_tag="CD196_0027"
/note="ATP-binding subunits of Clp protease and DnaK/DnaJ
chaperones [Posttranslational modification, protein
turnover, chaperones]; Region: clpA; COG0542"
/db_xref="CDD:30888"
misc_feature 43079..43225
/gene="clpC"
/locus_tag="CD196_0027"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:202433"
misc_feature 43358..43819
/gene="clpC"
/locus_tag="CD196_0027"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 43433..43456
/gene="clpC"
/locus_tag="CD196_0027"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(43436..43459,43646..43648,43760..43762)
/gene="clpC"
/locus_tag="CD196_0027"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 43634..43651
/gene="clpC"
/locus_tag="CD196_0027"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 43811..43813
/gene="clpC"
/locus_tag="CD196_0027"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 44342..44788
/gene="clpC"
/locus_tag="CD196_0027"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 44444..44467
/gene="clpC"
/locus_tag="CD196_0027"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(44447..44470,44660..44662,44786..44788)
/gene="clpC"
/locus_tag="CD196_0027"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 44648..44665
/gene="clpC"
/locus_tag="CD196_0027"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 44963..45202
/gene="clpC"
/locus_tag="CD196_0027"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; pfam10431"
/db_xref="CDD:204486"
gene 45424..46797
/gene="radA"
/locus_tag="CD196_0028"
/db_xref="GeneID:8465946"
CDS 45424..46797
/gene="radA"
/locus_tag="CD196_0028"
/note="Sms; stabilizes the strand-invasion intermediate
during the DNA repair; involved in recombination of donor
DNA and plays an important role in DNA damage repair after
exposure to mutagenic agents"
/codon_start=1
/transl_table=11
/product="DNA repair protein RadA"
/protein_id="YP_003213081.1"
/db_xref="GI:260681796"
/db_xref="GeneID:8465946"
/translation="MAKIKTKYVCQSCGYETAKWLGKCPECTKWNTFVEEIDQKSTKK
EVFIIDKSSSKPVSINSIESKEEERFTTDINELDRVLGGGIVKGSLVLVGGDPGIGKS
TLLIQVSSNVANLGKTVLYITGEESESQIKMRAKRLGINSENLYIFAENNLSIIESYL
ESVNPELIILDSIQTVFSPEISSAPGTVSQIKEGTSKFMKISKKMGISTFIVGHVTKE
GSLAGPKLLEHMVDTVLYFEGERYNTYRLVRAVKNRFGSTNELGVFEMRDLGLVELDN
PSKILISEKPKDVAGSVIISTVEGTRPMLLELQALVSPTSFGIPKRTSTGVDYNRVGM
LLAVLEKRVGLQIQNQDVYINIVGGIKINEPSIDLGIAISVASSFRNIPIDENIAVTG
EVGLTGEVRAVSFIEKRIAECKKLGFKKIVVPRSNYDVVKETKGIEIWPVDNLRQAIN
IVLGRNQ"
misc_feature 45424..46788
/gene="radA"
/locus_tag="CD196_0028"
/note="DNA repair protein RadA; Provisional; Region:
PRK11823"
/db_xref="CDD:183326"
misc_feature 45445..46557
/gene="radA"
/locus_tag="CD196_0028"
/note="Sms (bacterial radA) DNA repair protein. This
protein is not related to archael radA any more than is to
other RecA-like NTPases. Sms has a role in recombination
and recombinational repair and is responsible for the
stabilization or processing of...; Region: Sms; cd01121"
/db_xref="CDD:29987"
misc_feature 45706..45729
/gene="radA"
/locus_tag="CD196_0028"
/note="Walker A motif/ATP binding site; other site"
/db_xref="CDD:29987"
misc_feature order(45709..45711,45721..45729,45784..45786,45790..45792,
45934..45939)
/gene="radA"
/locus_tag="CD196_0028"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29987"
misc_feature 45925..45936
/gene="radA"
/locus_tag="CD196_0028"
/note="Walker B motif; other site"
/db_xref="CDD:29987"
misc_feature <46495..46704
/gene="radA"
/locus_tag="CD196_0028"
/note="Subunit ChlI of Mg-chelatase; Region: ChlI;
cl12214"
/db_xref="CDD:209472"
gene 46800..47870
/locus_tag="CD196_0029"
/db_xref="GeneID:8466502"
CDS 46800..47870
/locus_tag="CD196_0029"
/note="non-specific DNA-binding; scans chromosomes during
sporulation for DNA-damage; delays initiation of
sporulation; participates in a checkpoint signaling
cascade for cell-cycle progression and DNA repair"
/codon_start=1
/transl_table=11
/product="DNA integrity scanning protein DisA"
/protein_id="YP_003213082.1"
/db_xref="GI:260681797"
/db_xref="GeneID:8466502"
/translation="MENFLDNKNMLYALKMISPGTPLRLGLNNVLRAKTGGLIVIATN
EDVMKIVDGGFAINAEYSPSYLYELAKMDGAIVLSGDVKKILFANAQLIPDYFIETSE
TGTRHRTAERVAKQTGAIVIGISQRRNVITVYRGNEKYVVEDISKIFTKANQAIQTLE
KYKTVLDQAVTNLNALEFNDLVTIYDVALVMQKMEMVMRVTSIIEKYVIELGDEGTLV
SMQLEELMGTTRIDQKLIFKDYNKENTEIKELMKKVKNLNSEELIELVNMAKLLGYSG
FSESMDMPIKTRGYRILSKIHRLPTAIIENLVNYFENFQQILDASIEELDEVEGIGEI
RATYIKNGLIKMKQLVLLDRHI"
misc_feature 46815..47867
/locus_tag="CD196_0029"
/note="DNA integrity scanning protein DisA; Provisional;
Region: PRK13482"
/db_xref="CDD:184079"
misc_feature 46866..47219
/locus_tag="CD196_0029"
/note="DisA bacterial checkpoint controller
nucleotide-binding; Region: DisA_N; pfam02457"
/db_xref="CDD:190315"
misc_feature 47223..47654
/locus_tag="CD196_0029"
/note="DisA bacterial checkpoint controller linker region;
Region: DisA-linker; pfam10635"
/db_xref="CDD:151152"
gene 47959..49053
/locus_tag="CD196_0030"
/db_xref="GeneID:8463298"
CDS 47959..49053
/locus_tag="CD196_0030"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213083.1"
/db_xref="GI:260681798"
/db_xref="GeneID:8463298"
/translation="MIRKVTRILFILLGFTIGITTYLTLMKDFEILTFGKETYGYIAA
VVAGIIIAILGYLIEPWVVNKVKEIAKIVDKELSKYPQTDILLGSMGLIVGFVIAYLL
SGLVNRIPIVGGILSLLLYLFLGYLGMKVALKSKNDLFNIGKLGRLANPIKDKDKDKE
NKKEVKAIPPKVLDTSVIIDGRIADICKTGFIEGKLIIPAFVLEELRHIADSSDDLKR
VRGRRGLDILNIIQKELNIEVEISERDFDDIAEVDSKLLKLAQVLNGKVVTNDYNLNK
VAQFQGVEVLNINELANAIKPVAIPGEDMVVQVVKEGKEAQQGVAYLDDGTMIVVDGG
RKYMNETIKVLVTSVLQTPAGRMIFAKPKN"
misc_feature 48136..49050
/locus_tag="CD196_0030"
/note="Integral membrane protein (PIN domain superfamily)
[General function prediction only]; Region: COG4956"
/db_xref="CDD:34564"
misc_feature 48469..48849
/locus_tag="CD196_0030"
/note="PIN domain of Thermus Thermophilus Hb8,
uncharacterized Bacillus subtilis YacL, and other
bacterial homologs; Region: PIN_YacL; cd09877"
/db_xref="CDD:189047"
misc_feature order(48478..48480,48571..48573,48715..48717,48769..48771)
/locus_tag="CD196_0030"
/note="putative active site [active]"
/db_xref="CDD:189047"
gene 49182..51359
/locus_tag="CD196_0031"
/db_xref="GeneID:8463299"
CDS 49182..51359
/locus_tag="CD196_0031"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213084.1"
/db_xref="GI:260681799"
/db_xref="GeneID:8463299"
/translation="MRKKIISFLATFIIILTSASQYSFADDMSTRGKVIFIDMNRTSM
SNMLRIKSLREELDNRGYIGLMNIRGDKGSDDRRSYASMGAGGRANVANEEDINFESS
SKDRNIVFESATGKSAKGINNLTINKSINENLNFGEYGSVLGSLGQSLSENGLKASVL
GNSDIIENGQLIKNRNLCLTAMDEYGRIPNGNVDTINKKDLSMPYGISTDYDKLIVET
KEAYKNNDVVFVELGDTYRLDLYKPNLNEKTYESVKDNIEKNIDVYLKNIFSMVEEND
TVYIASAFPSDLDYKNKRRLSPIIKLNGEGKGILSSSTTRREGIVTNLDVGVEILDNF
NIKNQNMVGRKYELINRDDNKEFLMDEYQKIVSISSIRSTILNGFVSIVFLSWIVAMI
AILFRKHISKNYKETTFFILKELLKIGIVMPLSFMITPIMNFKTPLAISLGIIIITLT
IYLISKVLIKNDLKNMLFFTGLTIVIMVIDAGFGSYLMKSNVMSYDCIIGARYYGVGN
EYQGVAIGSAIFTFAILLTYKNIPKWSIIVFSLVILITSASPIMGANVGSAISECVAF
LLFILLIYNVKIDFKKIVLLGIAVLFVLGVFVAIDMILGSNSHLGMFVKEIYFNGPGE
IIQTFSRKIEMNLKLAQTSAWVNILLTGIGVILVLMINQIRYFKQLMDEYPIVFKGFI
ASIAGCLVTLLVNDSGIVSSATAFIYVIVPMITLSINLTALKE"
gene complement(51545..52390)
/locus_tag="CD196_0032"
/db_xref="GeneID:8463300"
CDS complement(51545..52390)
/locus_tag="CD196_0032"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_003213085.1"
/db_xref="GI:260681800"
/db_xref="GeneID:8463300"
/translation="MNRNNFSHEIIEPIDNLDVNFKLFDDSGSYVANHWHNSLEIIYI
TSGDLQINMEGYTYNLKANECMFINSGIIHSTRCTYQDTSILLQVPLSFLNKYIPDFK
NCYFDFKVNANDNNYKKNSGKVKLILENMREIKLSSPPAANLLFTSLLFELLFELYTN
FKISVGNKNMKKTVLDLSKFEPVLEYTKINYKMPISINKIAKVAHLQPEYFCRKFKQY
MGQTYLEYLNDVRISHIYKDLINTNDTLCSILEAHGFTNTKLFYRIFKEKFKCTPKHI
RKKST"
misc_feature complement(52130..52309)
/locus_tag="CD196_0032"
/note="Cupin domain; Region: Cupin_2; pfam07883"
/db_xref="CDD:203791"
misc_feature complement(51707..51823)
/locus_tag="CD196_0032"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature complement(51560..51811)
/locus_tag="CD196_0032"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
gene 52607..53773
/locus_tag="CD196_0033"
/db_xref="GeneID:8463301"
CDS 52607..53773
/locus_tag="CD196_0033"
/codon_start=1
/transl_table=11
/product="beta-glucosidase"
/protein_id="YP_003213086.1"
/db_xref="GI:260681801"
/db_xref="GeneID:8463301"
/translation="MYIKGVNLGGWLVLEKWMTSSLFEGTEAEDEYYLPRQLSREAYE
SRIKTHRSEYITERDFATIKSMGFNSVRIPVPYFIFGDCEPFIGCVKELDKAFAWADK
YGLSILIDLHTVPGSQNGFDNGGISGICSWSQNPEYVAFTLNVLERLAKRYGMRHELY
GIQILNEPITERMWNIMNVPNRFKAVDKEMARGSKPNSLEFLRDFYIKAYKVMRPYMR
EENVIVFHDAFELKAWKDFMREEEFKNIVLDTHQYLMLAESDGCEQSIDSYLKYIREN
YAKDILQMQKYFPVICGEWSLFNSYACGIDTNGGQSPLNGIESNIDKLSKDDKRELYR
KIAKAQLDAWRNGSGHYYWNYKLLLDTVNEEGWIGWDSWDLGKCVAQEWYPIEY"
misc_feature 52610..>53131
/locus_tag="CD196_0033"
/note="Endoglucanase [Carbohydrate transport and
metabolism]; Region: BglC; COG2730"
/db_xref="CDD:32616"
misc_feature 52754..>53110
/locus_tag="CD196_0033"
/note="Glycosyl hydrolases family 2, TIM barrel domain;
Region: Glyco_hydro_2_C; cl15381"
/db_xref="CDD:212627"
gene 53795..55441
/locus_tag="CD196_0034"
/db_xref="GeneID:8463302"
CDS 53795..55441
/locus_tag="CD196_0034"
/codon_start=1
/transl_table=11
/product="beta-xylosidase"
/protein_id="YP_003213087.1"
/db_xref="GI:260681802"
/db_xref="GeneID:8463302"
/translation="MIKNPILPGFNPDPCICRKGDDYYLVVSSFEWFPGIPVYHSKDL
KNWELYTHILTDETKIDLKKLPSSKGIWAPCLTYCEEEDLFYIVYGIMNSMNARYFDV
DNYLITSKDIKGEWSEPVYIHSSGFDASILHDDDGKKWIASLDWETREGYEKPGVICL
VEYCTKKKEIVGYPKRIWSGGTDRGCIEAPHITKRGDYYYIMCAEGGTGYGHSVTMGR
AKNIWRPYEKDSMNPIVTSIPGDFYERHDPDHLKPKYYNPESKLQKSGHGSYIETTSG
EVYLVHLTSRPFVPELRCTLGRETAIQKMKWTKDNWLRMEDESNLAKEYVSESKLEEH
LVSSIPSFDDFDSNVLGLQYYAPRISPLSFADVKSRPGYVRIRGQESRTSLNKVSILA
RKLTSVYARITTKMEFYPEVHQHSAGLIMYYDNMNYINLRKYYSETLGQSALSIIHLE
NGEKTEFLNTRIPIKDIPIYLRLYIQGRKSYFEWSYDEKNYQRIGKVFDTTKFSDEYC
KYGEFTGTFIGLTCADRVKHKHYADFDFFEYIADESKDVD"
misc_feature 53795..55411
/locus_tag="CD196_0034"
/note="Beta-xylosidase [Carbohydrate transport and
metabolism]; Region: XynB; COG3507"
/db_xref="CDD:33310"
misc_feature 53804..54739
/locus_tag="CD196_0034"
/note="Glycosyl hydrolase family 43, beta-D-xylosidase;
Region: GH43_XYL_1; cd09000"
/db_xref="CDD:185741"
misc_feature order(53831..53833,53882..53884,54008..54013,54173..54178,
54356..54358,54413..54418,54593..54595,54686..54688)
/locus_tag="CD196_0034"
/note="inhibitor binding site; inhibition site"
/db_xref="CDD:185741"
misc_feature order(53831..53833,54176..54178,54356..54358)
/locus_tag="CD196_0034"
/note="active site"
/db_xref="CDD:185741"
gene 55538..56911
/locus_tag="CD196_0035"
/db_xref="GeneID:8463303"
CDS 55538..56911
/locus_tag="CD196_0035"
/codon_start=1
/transl_table=11
/product="xylose transporter"
/protein_id="YP_003213088.1"
/db_xref="GI:260681803"
/db_xref="GeneID:8463303"
/translation="MNTEVNVKATTIRYEKISFFERISYGCGDLGCNIIYSAMSAFLL
FYYTNYADVSAAAVGSIMLVSRILDGFSDLTMGIIVDRTKSKYGKARPWILRMAIPFA
IAAVLLFSVPSNLGITSKLIYIFITYNLVSTVIYTAINVPYATLNSLITQNQYERGVL
SIFRMILATCGTLLINGLTLPLVEYFGNNLSAWTKTFFVFGIASIMVFFITFTGTKER
VKAVKQDRNEVIPFKIGIKSLFRNKYWIQITLCLVCIFIVFAINGGSSVYYAKFILGD
EKLFGPINMVSNISQIIAMFMVAPFIKKFGKRNVLIVGSIILISSNVMFIIVGQNYIG
VIFASAIKGIGSAGIASTMFAIVSDTIEYGEWKTGYRTEGLINSASSFGFKVGNGLGS
AILGAVLSIGGYVGTSATQSDLAIVSIKVCFIYLPIFITILQIIIMFFYKLDKEYSTI
LNELNTK"
misc_feature 55580..56806
/locus_tag="CD196_0035"
/note="melibiose:sodium symporter; Provisional; Region:
PRK10429; cl15392"
/db_xref="CDD:199528"
misc_feature 55604..56872
/locus_tag="CD196_0035"
/note="MFS/sugar transport protein; Region: MFS_2;
pfam13347"
/db_xref="CDD:205527"
gene 57356..58309
/locus_tag="CD196_0036"
/db_xref="GeneID:8463304"
CDS 57356..58309
/locus_tag="CD196_0036"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_003213089.1"
/db_xref="GI:260681804"
/db_xref="GeneID:8463304"
/translation="MKKIGDLRLMMKCCSLYYEDNLNQQEIANQLGISRPTISRILKE
AFEQGIVKIQIVDVLKNDYQKIERSLERKYKLKEVIVVDDKQDALTQKQELARAVSEY
LTRVVKENDIIGVSIGTTLKEIPRYVEKSNCKNVTFIPLLGGIGDNEIDIHANQIAVS
LARAFGGDFKLLHAPAVMSDLSTKEKLCKDEKIKEVLDLIDKTTIAIVGIGNPMSLNS
TIMASGYMNEADIEDLKKYNSIGAICLQAFDKEGKTSILEFNQRVLGVKLEDLKKIKR
TIGVASGDEKIEAIKASLKAKFINSLAINHSLALKLLEDCD"
misc_feature 57356..58300
/locus_tag="CD196_0036"
/note="Transcriptional regulator, contains sigma
factor-related N-terminal domain [Transcription]; Region:
DeoR; COG2390"
/db_xref="CDD:32535"
misc_feature <57401..57499
/locus_tag="CD196_0036"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(57404..57406,57422..57427,57455..57457,57461..57466,
57470..57478,57482..57487,57491..57493)
/locus_tag="CD196_0036"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
misc_feature 57548..58297
/locus_tag="CD196_0036"
/note="Putative sugar-binding domain; Region: Sugar-bind;
pfam04198"
/db_xref="CDD:202929"
gene 58341..59309
/gene="acoA"
/locus_tag="CD196_0037"
/db_xref="GeneID:8463305"
CDS 58341..59309
/gene="acoA"
/locus_tag="CD196_0037"
/codon_start=1
/transl_table=11
/product="acetoin:2,6-dichlorophenolindophenol
oxidoreductase subunit alpha"
/protein_id="YP_003213090.1"
/db_xref="GI:260681805"
/db_xref="GeneID:8463305"
/translation="MYMSISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSV
GQEASSVAAVMALEKGDLVSLTHRGHSQFIGMGIDLNKMMAELMGKETGFCKGKGGSM
HIADIESGNLGANGVVGGGLTIAPGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGIN
LSSIWKLPIIFYCENNLYGMSTSIKRHMNIESIATRAASYGIEGISIDGYNPIEVYET
VQKAAEKCRRGEGPVLIESRTYRWLGHSKSDANVYRTKEEIESWKAKDPIEFLKNYLI
ENNLSNEDELDKIQEFAKQSIEDAVEFAQNSPNPKIESLLEDVYAD"
misc_feature 58359..59303
/gene="acoA"
/locus_tag="CD196_0037"
/note="pyruvate dehydrogenase E1 component, alpha subunit;
Region: PDH_E1_alph_y; TIGR03182"
/db_xref="CDD:188297"
misc_feature 58377..59252
/gene="acoA"
/locus_tag="CD196_0037"
/note="Thiamine pyrophosphate (TPP) family, E1 of
PDC_ADC_BCADC subfamily, TPP-binding module; composed of
proteins similar to the E1 components of the human
pyruvate dehydrogenase complex (PDC), the acetoin
dehydrogenase complex (ADC) and the branched chain...;
Region: TPP_E1_PDC_ADC_BCADC; cd02000"
/db_xref="CDD:48163"
misc_feature order(58449..58451,58605..58607,58686..58691,58782..58784,
58788..58799,58806..58808,58818..58820,58830..58832,
58875..58886,58926..58928,58941..58943,59094..59096)
/gene="acoA"
/locus_tag="CD196_0037"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:48163"
misc_feature order(58539..58544,58686..58688,58692..58694,58776..58787,
58866..58868,58872..58874,59073..59075)
/gene="acoA"
/locus_tag="CD196_0037"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:48163"
misc_feature order(58671..58673,58677..58679,58683..58685,58698..58700,
58707..58712,58719..58724,58728..58733,58740..58742,
58797..58802,58818..58823,58830..58832)
/gene="acoA"
/locus_tag="CD196_0037"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:48163"
misc_feature order(59058..59078,59082..59084,59085..59111,59133..59141)
/gene="acoA"
/locus_tag="CD196_0037"
/note="phosphorylation loop region [posttranslational
modification]"
/db_xref="CDD:48163"
gene 59334..60320
/gene="acoB"
/locus_tag="CD196_0038"
/db_xref="GeneID:8465810"
CDS 59334..60320
/gene="acoB"
/locus_tag="CD196_0038"
/codon_start=1
/transl_table=11
/product="acetoin:2,6-dichlorophenolindophenol
oxidoreductase subunit beta"
/protein_id="YP_003213091.1"
/db_xref="GI:260681806"
/db_xref="GeneID:8465810"
/translation="MSTRELTYAQAIKEAMSEEMRRDENVIFMGEDIGIYGGAFGVSV
GMIDEFGPERVRDTPISEAAIAGAAAGAAATGLRPIMEVMFMDFVTISMDAIVNQAAK
MRYMFGGKAQVPMVVRCPGGSGTGSAEQHSQSLEAWFCHVPGVKVVAPSTPADAKGLL
KAAIRDNNPVIFVENKLLYRKKGFVPEDDYVIEIGKADIKREGTDVTVITYGRMLQSV
EEAAETLSKENINVEIIDLRTLYPLDKETIVKSVCKTGRVLICHEAAKTGGLGGEISA
LITESESFDYLDAPVKRICGKDVPIPYNPELEKAVVPRVDEIEEAIKSLIVR"
misc_feature 59346..60311
/gene="acoB"
/locus_tag="CD196_0038"
/note="Pyruvate/2-oxoglutarate dehydrogenase complex,
dehydrogenase (E1) component, eukaryotic type, beta
subunit [Energy production and conversion]; Region: AcoB;
COG0022"
/db_xref="CDD:30372"
misc_feature 59361..59861
/gene="acoB"
/locus_tag="CD196_0038"
/note="Pyrimidine (PYR) binding domain of the beta
subunits of the E1 components of human pyruvate
dehydrogenase complex (E1- PDHc) and related proteins;
Region: TPP_PYR_E1-PDHc-beta_like; cd07036"
/db_xref="CDD:132919"
misc_feature order(59403..59405,59409..59411,59427..59429,59493..59495,
59502..59504,59508..59525,59532..59537,59541..59549,
59604..59606,59613..59618,59643..59648,59712..59714,
59721..59723,59766..59771,59832..59837)
/gene="acoB"
/locus_tag="CD196_0038"
/note="alpha subunit interface [polypeptide binding];
other site"
/db_xref="CDD:132919"
misc_feature order(59424..59426,59511..59513,59517..59519,59595..59597,
59604..59606)
/gene="acoB"
/locus_tag="CD196_0038"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132919"
misc_feature order(59427..59429,59502..59504,59508..59519,59601..59606,
59610..59612,59625..59627,59637..59639,59646..59648,
59712..59714,59718..59723,59745..59747,59751..59756,
59760..59762)
/gene="acoB"
/locus_tag="CD196_0038"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:132919"
misc_feature 59916..60272
/gene="acoB"
/locus_tag="CD196_0038"
/note="Transketolase, C-terminal domain; Region:
Transketolase_C; pfam02780"
/db_xref="CDD:202391"
gene 60333..61379
/gene="acoC"
/locus_tag="CD196_0039"
/db_xref="GeneID:8465811"
CDS 60333..61379
/gene="acoC"
/locus_tag="CD196_0039"
/codon_start=1
/transl_table=11
/product="E2 component of acetoin dehydrogenase enzyme
system (dihydrolipoamide acetyltransferase)"
/protein_id="YP_003213092.1"
/db_xref="GI:260681807"
/db_xref="GeneID:8465811"
/translation="MVANKIKATPAARSQARKDNIKLDRLIGSGENGRIHLVDVLNYL
KDNKANTTPLARRIAEDLNIDLETIVGTGYSGKIRKCDVEKLTAKETIVSNNTSKYSE
KKELKIENENSSMFNTVEGIFEKPNPMRATVAKRMSESYFSAPVFTFNIEVDATELKV
LRAKLIDTVKESTGVKLTMTDLIVMAVSKILPNHQALNSAWTDEGIFRYKDVNIAIAV
GLDEGLYVPVVKNANKKSLKEIAKESKELAEKVKTGKLMPADQEGNTFTISNVGMYGI
TTFTPIINMPSSAILGVGATQDKFVPVNGEAKIKPIMNLSLTSDHRVIDGTVAAKFLK
DLKELLENPLSMLV"
misc_feature 60333..61376
/gene="acoC"
/locus_tag="CD196_0039"
/note="dihydrolipoamide acetyltransferase; Provisional;
Region: PRK14843"
/db_xref="CDD:184847"
misc_feature 60342..60458
/gene="acoC"
/locus_tag="CD196_0039"
/note="e3 binding domain; Region: E3_binding; pfam02817"
/db_xref="CDD:202412"
misc_feature 60486..60587
/gene="acoC"
/locus_tag="CD196_0039"
/note="e3 binding domain; Region: E3_binding; pfam02817"
/db_xref="CDD:202412"
misc_feature 60741..61376
/gene="acoC"
/locus_tag="CD196_0039"
/note="2-oxoacid dehydrogenases acyltransferase (catalytic
domain); Region: 2-oxoacid_dh; pfam00198"
/db_xref="CDD:201074"
gene 61546..63276
/gene="acoL"
/locus_tag="CD196_0040"
/db_xref="GeneID:8465812"
CDS 61546..63276
/gene="acoL"
/locus_tag="CD196_0040"
/codon_start=1
/transl_table=11
/product="E3 component of acetoin dehydrogenase enzyme
system (dihydrolipoyl dehydrogenase)"
/protein_id="YP_003213093.1"
/db_xref="GI:260681808"
/db_xref="GeneID:8465812"
/translation="MSVEVIMPKAGVAMEEGTIVSWLKQEGEEVKIGEPILEITTDKV
NMEIESEGEGTLAVIIHKEEGEVLPVFTVIGVIAEKGENQEEVKAKYLSGNVSKEDIV
EENQNIEVKEEKINKKECNHDYDVVVIGGGPGGYLSALKAALLGGRVALVEENILGGT
CLNRGCIPTKTYIKTAEILEEIDQLSKRGVKVTVDKEQDIKKAIKYKNRVVKKLTAGV
GGLLKSRDVDVFNLKASVKEEHKVILSDGKVLDTENIIIATGSKVRILPIKGIESNLI
ITSTEALDLETVPEELVIIGGGVIGCEFAEIFNSRGSKVTIVEMEDRVIPRMDKELSE
SLKYSLSKKGINVLTKKKVSEFKEEGNNILVCIEGEVPIKADLCLYAIGREANLSGIE
DLDIKIDKGSIVVNSKMETSIPSIYAVGDVTGGVMLAHAAFKMGEVAASNALGVNKEV
DLGALPSCVYTIPEVASVGITEEDARKKYNVKVGKFNFAGNGRALASGQEQGYVKVVA
DAKYGEILGIHMFGCGVAELINHAASFKALEIPTDEASELIFGHPCTSEALMEALADV
NGECLHLPKK"
misc_feature 61552..61776
/gene="acoL"
/locus_tag="CD196_0040"
/note="Lipoyl domain of the dihydrolipoyl acyltransferase
component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid
dehydrogenase multienzyme complexes, like pyruvate
dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH)
and branched-chain 2-oxo acid...; Region: lipoyl_domain;
cd06849"
/db_xref="CDD:133458"
misc_feature order(61642..61644,61663..61680,61690..61692)
/gene="acoL"
/locus_tag="CD196_0040"
/note="E3 interaction surface; other site"
/db_xref="CDD:133458"
misc_feature 61672..61674
/gene="acoL"
/locus_tag="CD196_0040"
/note="lipoyl attachment site [posttranslational
modification]; other site"
/db_xref="CDD:133458"
misc_feature 61915..63261
/gene="acoL"
/locus_tag="CD196_0040"
/note="dihydrolipoamide dehydrogenase; Region:
lipoamide_DH; TIGR01350"
/db_xref="CDD:211643"
misc_feature 62449..62655
/gene="acoL"
/locus_tag="CD196_0040"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
misc_feature 62911..63231
/gene="acoL"
/locus_tag="CD196_0040"
/note="Pyridine nucleotide-disulphide oxidoreductase,
dimerisation domain; Region: Pyr_redox_dim; pfam02852"
/db_xref="CDD:202431"
gene 63694..66642
/locus_tag="CD196_0041"
/db_xref="GeneID:8465813"
CDS 63694..66642
/locus_tag="CD196_0041"
/codon_start=1
/transl_table=11
/product="transcription antiterminator"
/protein_id="YP_003213094.1"
/db_xref="GI:260681809"
/db_xref="GeneID:8465813"
/translation="MRQRIKNLIENEDKKNPLTDEAISSRLNIRREDVTFLRNELKIE
DSRQRRKVVLIKAIKDILKEEKTINKNDITRRLNSIGFTVSRFTVIQYLKEIQDSGDL
KLDKESDDKKEEIINNRENKDIAFDKLIGSSGSLSTIIKLAKAAILYPPHGLHTIIMG
PTGVGKSELAECMYKFAVESSRFPKNAPFIVFNAADYSENPQLLLSQLFGHVKGAFTG
ADENKEGLVSKADGGILFIDEIHRLPHEGQEILFQLIDKGMVRKLGETRLTHKIDVMI
ISATSEPIDSHLLNTFKRRIPVTIEIPELVARPLNERFDIINNFFLIEAQRMGANIHI
KSDVLKALMLYDCIGNVGQLRSDIQVACARGLLNQLTNKLKEVNISISDVPGYVKQGL
IKIRNCRGKIENYVDGDLIIDSNLQGEIEKKNEDIYTFPDEIYKLTERRHIDLLEQGL
DFDVINRIIGGELESCIQKYIKQVKKVSISNNLPDISPIVGKYIVELTYEVIKIASQY
LSSLEPNLHLCLAVHLKAAFERLKEGKVISNAHLKEIIGNYPLEYSVAEKVAQYLKER
YNINLPKEEIGIIAIYFKMSSRRDMSEQKKIGVLLMAHGRVASSVCEVTNKLLGINHA
RYLDMPFEKKPEEMIEEATTIIKDIDEGRGVIILVDMGSLSYFGDIISGKTGINIRTI
SRFDTLLSIEVIRRAVLPDLTIDEIVDEVKGIEPQVKEKVSKCNNTKVDFRKPIILTL
CITGLGGACKIKKILEENIKSITEKVDIEPIGMIEYPSLDLEIKQISNDKNVIAIVGT
IDPQIANIPFFSLVDINDKAKLNQINNLIDTNQIGETNKKYELSDLIHKEDIFVDLQV
KSKEEVLKYMSKKLREKGYVTKNFYKKVVERDNLFPTELSDEIAIPHTDGIDVIRPAI
SIAILKKPIVWSKSKVKIILLLAVDQKCFNPLSTLLSFIETDEFKKIKNIKDRDFIRE
MILDGVNENN"
misc_feature <63694..63846
/locus_tag="CD196_0041"
/note="Sigma-54, DNA binding domain; Region: Sigma54_DBD;
pfam04552"
/db_xref="CDD:113327"
misc_feature 64144..64605
/locus_tag="CD196_0041"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 64147..64587
/locus_tag="CD196_0041"
/note="ATPases associated with a variety of cellular
activities; Region: AAA; smart00382"
/db_xref="CDD:197690"
misc_feature 64171..64194
/locus_tag="CD196_0041"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(64174..64197,64405..64407,64534..64536)
/locus_tag="CD196_0041"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 64393..64410
/locus_tag="CD196_0041"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 64576..64578
/locus_tag="CD196_0041"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 65188..65451
/locus_tag="CD196_0041"
/note="PRD domain; Region: PRD; pfam00874"
/db_xref="CDD:201484"
misc_feature 65482..65844
/locus_tag="CD196_0041"
/note="PTS_IIA, PTS system, mannose/sorbose specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIA_man; cl00025"
/db_xref="CDD:206789"
misc_feature order(65503..65505,65545..65550,65578..65580,65680..65682,
65776..65778)
/locus_tag="CD196_0041"
/note="active pocket/dimerization site"
/db_xref="CDD:28890"
misc_feature order(65503..65505,65671..65673,65680..65682)
/locus_tag="CD196_0041"
/note="active site"
/db_xref="CDD:28890"
misc_feature 65503..65505
/locus_tag="CD196_0041"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:28890"
misc_feature 66226..66615
/locus_tag="CD196_0041"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cd00211"
/db_xref="CDD:29266"
misc_feature order(66352..66354,66400..66402)
/locus_tag="CD196_0041"
/note="active site"
/db_xref="CDD:29266"
misc_feature 66400..66402
/locus_tag="CD196_0041"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29266"
gene 66620..67084
/locus_tag="CD196_0042"
/db_xref="GeneID:8463306"
CDS 66620..67084
/locus_tag="CD196_0042"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIA"
/protein_id="YP_003213095.1"
/db_xref="GI:260681810"
/db_xref="GeneID:8463306"
/translation="MESMKIISSNLIFKNIEVSNNEDALKFLGQRLFDEQYVKESYIQ
AVVAREKKYATGLPTEIYGVAIPHTDIVHVNEPGIAIGILNKPVKFIMMGTDDTEIDV
KVVFMLAVKEPQEQLQLLEKLMTIFQDKNILNNIVDLSEESVSDLLNSKLKN"
misc_feature 66638..67045
/locus_tag="CD196_0042"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cd00211"
/db_xref="CDD:29266"
misc_feature order(66764..66766,66821..66823)
/locus_tag="CD196_0042"
/note="active site"
/db_xref="CDD:29266"
misc_feature 66821..66823
/locus_tag="CD196_0042"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29266"
gene 67197..67499
/locus_tag="CD196_0043"
/db_xref="GeneID:8463307"
CDS 67197..67499
/locus_tag="CD196_0043"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIB"
/protein_id="YP_003213096.1"
/db_xref="GI:260681811"
/db_xref="GeneID:8463307"
/translation="MGVTNVTKKILVACGTGVCTSTIAINKLKKALQDIGKLDMVNIT
QCKVVEVASKAPDYDLIICTTQVSSSIKTPVINGLPFLTGVGMDKLINDVLEELEL"
misc_feature 67218..67490
/locus_tag="CD196_0043"
/note="PTS_IIB_galactitol: subunit IIB of enzyme II (EII)
of the galactitol-specific
phosphoenolpyruvate:carbohydrate phosphotransferase system
(PTS). In this system, EII is a galactitol-specific
permease with two cytoplasmic domains (IIA and IIB) and
a...; Region: PTS_IIB_galactitol; cd05566"
/db_xref="CDD:99908"
misc_feature order(67236..67247,67251..67259)
/locus_tag="CD196_0043"
/note="P-loop; other site"
/db_xref="CDD:99908"
misc_feature order(67236..67238,67242..67247,67254..67259)
/locus_tag="CD196_0043"
/note="active site"
/db_xref="CDD:99908"
misc_feature 67236..67238
/locus_tag="CD196_0043"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99908"
gene 67561..68925
/locus_tag="CD196_0044"
/db_xref="GeneID:8463308"
CDS 67561..68925
/locus_tag="CD196_0044"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIC"
/protein_id="YP_003213097.1"
/db_xref="GI:260681812"
/db_xref="GeneID:8463308"
/translation="MEGLYMEILNFIVGLGAQVMMPIIICIFGLILGTKLGKSLRAGL
TVGVGFIGLNTIIALLTDNLGPATQQMVKNLGLSLSIIDVGWPAASAIAFASTVGALI
IPIGLVVNIVMLITNTTQTVDVDIWDYWHFAFTGALVAGATQSVMWGVFAAVANMVIV
LVMADLTAPGIEEYLGMPGISLPHGFTQAFVPIAIVVNKLLDLIPGINKIEINADTLQ
KKFGLFGEPLIMGSVIGVIIGIAAKYDIKGILQLGVTMGAVLILIPKMAALLMEGLLP
VSEAAQEFIEKRFKNRGKIYIGLDSAVGIGHPVTLSVALVLVPLTILIAAILPGNKVL
PFADLAVIPFALVLIVPITKGNVFRTLIIGIIIITSGLLIATNLAPLFTQMALNASFK
MPEGATMISSICDGANPLSWVFVKVMNYKVIGGVVFGVIALGMAIYNRNRIINENKKL
SIEE"
misc_feature 67579..68901
/locus_tag="CD196_0044"
/note="Phosphotransferase system, galactitol-specific IIC
component [Carbohydrate transport and metabolism]; Region:
GatC; COG3775"
/db_xref="CDD:33570"
misc_feature 67594..68814
/locus_tag="CD196_0044"
/note="PTS system sugar-specific permease component;
Region: EIIC-GAT; cl04451"
/db_xref="CDD:213436"
gene 68960..69433
/locus_tag="CD196_0045"
/db_xref="GeneID:8463309"
CDS 68960..69433
/locus_tag="CD196_0045"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213098.1"
/db_xref="GI:260681813"
/db_xref="GeneID:8463309"
/translation="MKKYKYDSKRYLLSVTIPGFFMILILIYALFNNYINFNLNIYSL
LIIVCTYGIFNTFISSSNPKKIIIDSKCIHFTSFMTTHKYEIKDIEKIRIREFYNKKI
YLKINDGDLFKGRYWIRTNMFNNSIALYSYFIELEECLYPDSLRFRNKKFENKNI"
gene 69605..70255
/locus_tag="CD196_0046"
/db_xref="GeneID:8463310"
CDS 69605..70255
/locus_tag="CD196_0046"
/codon_start=1
/transl_table=11
/product="sugar-phosphate aldolase"
/protein_id="YP_003213099.1"
/db_xref="GI:260681814"
/db_xref="GeneID:8463310"
/translation="MLLEKLRKEVLQASLDLLNYNLVTLTGGNVSGRDEQTGYIAITP
SGMDYRNLTPSDIVIVDVDGNIIDGKWKASVDLSDHLYIYKHREDINSIIHTHSTYSS
CFAILNEPIECASTTLANEVGGSVPVAKFSPPTFKKMGKCVIEAIGDKRACLLANHGV
IAVGPSVGHALTAAVMLEDSAKVYYLAKSIGTPVLLPDEEIQRARDVFFNVYGQDK"
misc_feature 69611..70246
/locus_tag="CD196_0046"
/note="Class II Aldolase and Adducin head (N-terminal)
domain. Aldolases are ubiquitous enzymes catalyzing
central steps of carbohydrate metabolism. Based on
enzymatic mechanisms, this superfamily has been divided
into two distinct classes (Class I and II); Region:
Aldolase_II; cl00214"
/db_xref="CDD:206906"
misc_feature order(69638..69640,69650..69652,69674..69676,69746..69748,
69752..69757,69893..69895,69899..69904,69917..69925,
69944..69946,69950..69955,69995..69997,70073..70075,
70106..70108,70127..70129,70139..70141,70160..70162)
/locus_tag="CD196_0046"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:29521"
misc_feature order(69689..69691,69737..69742,69824..69832,69887..69889,
69893..69895,70076..70078)
/locus_tag="CD196_0046"
/note="active site"
/db_xref="CDD:29521"
misc_feature order(69887..69889,69893..69895,70076..70078)
/locus_tag="CD196_0046"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:29521"
gene 70429..71361
/locus_tag="CD196_0047"
/db_xref="GeneID:8463311"
CDS 70429..71361
/locus_tag="CD196_0047"
/codon_start=1
/transl_table=11
/product="lipoate-protein ligase"
/protein_id="YP_003213100.1"
/db_xref="GI:260681815"
/db_xref="GeneID:8463311"
/translation="MYYLLNKSTNPYFNLALEEYLFLNDKYNDDIIIIWRNEDSIFIG
KNQNPYQEVHHDVIEKGEIPILRRISGGGTVYHDLGNINMSFIQKDRQLHEIDFLEHT
KFMQKMLSTLGLDVSITERKDLFLNGKKISGSAQSIKRKNSLYHGTLLYDSDLNKLTK
YLNSNKATESNATKSVSSKVTNIKFLLEKDINYFLDYCVEYLKSNIKNIKELELDEED
IKSVYNIGEDKYRKIEWTYGKTPKFQVVLPFNNESKINIHVNRWKVSKFFISYDDNVI
NMDKLLDLNFFKEEIKESILENYPHYIDLINLIF"
misc_feature 70429..71145
/locus_tag="CD196_0047"
/note="Lipoate-protein ligase A [Coenzyme metabolism];
Region: LplA; COG0095"
/db_xref="CDD:30444"
misc_feature 70555..70890
/locus_tag="CD196_0047"
/note="Biotin/lipoate A/B protein ligase family; Region:
BPL_LplA_LipB; pfam03099"
/db_xref="CDD:202534"
gene 71602..72348
/gene="ispD"
/locus_tag="CD196_0048"
/db_xref="GeneID:8463312"
CDS 71602..72348
/gene="ispD"
/locus_tag="CD196_0048"
/codon_start=1
/transl_table=11
/product="2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase"
/protein_id="YP_003213101.1"
/db_xref="GI:260681816"
/db_xref="GeneID:8463312"
/translation="MMVKNKIRGDTMYSVIIVAAGSGRRMNLDINKQFIKLREKEIIA
HTIQVFYENINIDEIVVCIKKEEEDFFKENIINKYNFKNIKIAYGGKERQDSIYNGLK
KLDENCDIVLIHDGARPFVDHRIINESIKVAKEKKAVVVGVPVSDTIKIVSDGTVQET
PERNLLWAAQTPQTFEYNLIIDAYEQAYKNNYYGTDDSMLVENIGQSVTMVMGSYENI
KITSPEDLNIAEQILNMEKRDEVNSRRRII"
misc_feature 71638..72288
/gene="ispD"
/locus_tag="CD196_0048"
/note="CDP-ME synthetase is involved in
mevalonate-independent isoprenoid production; Region:
CDP-ME_synthetase; cd02516"
/db_xref="CDD:133009"
misc_feature order(71653..71655,71659..71676,71695..71697,71869..71880,
71887..71889,71944..71952,72256..72258)
/gene="ispD"
/locus_tag="CD196_0048"
/note="substrate binding site; other site"
/db_xref="CDD:133009"
misc_feature order(71953..71955,72010..72012,72034..72036,72040..72042,
72091..72108,72184..72189,72193..72198,72205..72207,
72220..72231,72241..72246)
/gene="ispD"
/locus_tag="CD196_0048"
/note="dimer interface; other site"
/db_xref="CDD:133009"
gene 72345..72830
/gene="ispF"
/locus_tag="CD196_0049"
/db_xref="GeneID:8466264"
CDS 72345..72830
/gene="ispF"
/locus_tag="CD196_0049"
/EC_number="4.6.1.12"
/codon_start=1
/transl_table=11
/product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
synthase"
/protein_id="YP_003213102.1"
/db_xref="GI:260681817"
/db_xref="GeneID:8466264"
/translation="MRIGLGYDVHKLTENRKLIIGGVEIPHDKGLLGHSDADVLIHAI
MDSILGALALGDIGKHFPDTDEEYKGADSMKLLEHVYNLITSKGYKIGNIDSTIIAQS
PKMAPYIESMRSNISKVLNTDIDNINIKATTEEGLGFTGAKQGIASQSICLLLLTSQN
N"
misc_feature 72348..72806
/gene="ispF"
/locus_tag="CD196_0049"
/note="MECDP_synthase
(2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase),
encoded by the ispF gene, catalyzes the formation of
2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEC) in the
non-mevalonate deoxyxylulose (DOXP) pathway for isoprenoid
biosynthesis; Region: MECDP_synthase; cd00554"
/db_xref="CDD:100025"
misc_feature order(72348..72353,72357..72359,72363..72365,72369..72377,
72387..72389,72492..72494,72498..72503,72507..72512,
72621..72623,72627..72629,72633..72635,72654..72656,
72660..72662,72726..72728,72732..72737,72744..72752,
72789..72791,72795..72797,72801..72803)
/gene="ispF"
/locus_tag="CD196_0049"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100025"
misc_feature order(72366..72368,72372..72374,72468..72470)
/gene="ispF"
/locus_tag="CD196_0049"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:100025"
misc_feature order(72510..72512,72516..72518,72642..72647,72651..72662,
72735..72743)
/gene="ispF"
/locus_tag="CD196_0049"
/note="CDP-binding sites; other site"
/db_xref="CDD:100025"
gene 73197..74912
/gene="proS"
/locus_tag="CD196_0050"
/db_xref="GeneID:8466266"
CDS 73197..74912
/gene="proS"
/locus_tag="CD196_0050"
/note="catalyzes the formation of prolyl-tRNA(Pro) from
proline and tRNA(Pro)"
/codon_start=1
/transl_table=11
/product="prolyl-tRNA synthetase"
/protein_id="YP_003213103.1"
/db_xref="GI:260681818"
/db_xref="GeneID:8466266"
/translation="MKMSKMFMPTLKEIPADAEITSHQLMVRSGMIKKMTSGVYNQLP
MGLRVFKKIEQIIREELNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRLKDRTER
EYCLGPTHEEAFTDIIRQEITSYKQLPLNLYQIQVKYRDERRPRFGVMRTKTFTMKDA
YSFDVDDKGLDKSYQDMFDAYVSIFDRCGLENSPVQADSGAIGGSTSAEFMVKSEVGE
DEVVFCSGCDYAANVERAESCNLASQKEEMKELEEVHTPGAATIKELEEFLKTSPDKF
AKTLVYEADGKTVVVVVRGDREVNEIKVSNAIGSVIEFALATDDVVRKVTNAEVGFAG
PIGINADYVFIDKEIVEQRNIVVGANKTEYHIKNANYGRDFEGIVGDFRNVQEGDQCI
VCGKPLEIARGVEVGHIFKLGTKYSESMNANFIDKDGKSKPIVMGCYGIGVERTAAAI
IEQHNDEKGIIWPLSVAPYHVVIVPANMKNEEQISIAENIYNDLQAMGVEVLLDDRDE
RIGVKFNDSELIGIPMRITVGKNINEGKVEFKLRHKEDKEIIDIEEINEKVKAEFIRN
NVRLG"
misc_feature 73197..74825
/gene="proS"
/locus_tag="CD196_0050"
/note="prolyl-tRNA synthetase; Provisional; Region:
PRK09194"
/db_xref="CDD:181689"
misc_feature 73245..>73844
/gene="proS"
/locus_tag="CD196_0050"
/note="Prolyl-tRNA synthetase (ProRS) class II core
catalytic domain. ProRS is a homodimer. It is responsible
for the attachment of proline to the 3' OH group of ribose
of the appropriate tRNA. This domain is primarily
responsible for ATP-dependent formation of...; Region:
ProRS_core_prok; cd00779"
/db_xref="CDD:73229"
misc_feature order(73293..73298,73317..73328,73347..73349,73398..73406,
73410..73415,73473..73475,73479..73493,73545..73547,
73605..73607,73656..73658)
/gene="proS"
/locus_tag="CD196_0050"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:73229"
misc_feature 73392..73415
/gene="proS"
/locus_tag="CD196_0050"
/note="motif 1; other site"
/db_xref="CDD:73229"
misc_feature order(73521..73523,73527..73529,73614..73616,73620..73622,
73644..73652,73659..73661,73665..73667,73671..73673)
/gene="proS"
/locus_tag="CD196_0050"
/note="active site"
/db_xref="CDD:73229"
misc_feature 73611..73622
/gene="proS"
/locus_tag="CD196_0050"
/note="motif 2; other site"
/db_xref="CDD:73229"
misc_feature 73872..74342
/gene="proS"
/locus_tag="CD196_0050"
/note="INS is an amino acid-editing domain inserted (INS)
into the bacterial class II prolyl-tRNA synthetase (ProRS)
however, this CD is not exclusively bacterial. It is also
found at the N-terminus of the eukaryotic/archaea-like
ProRS's of yeasts and...; Region: ProRS-INS; cd04334"
/db_xref="CDD:88585"
misc_feature order(74028..74030,74187..74192,74268..74270)
/gene="proS"
/locus_tag="CD196_0050"
/note="putative deacylase active site [active]"
/db_xref="CDD:88585"
misc_feature <74268..74555
/gene="proS"
/locus_tag="CD196_0050"
/note="Class II tRNA amino-acyl synthetase-like catalytic
core domain. Class II amino acyl-tRNA synthetases (aaRS)
share a common fold and generally attach an amino acid to
the 3' OH of ribose of the appropriate tRNA. PheRS is an
exception in that it attaches...; Region:
class_II_aaRS-like_core; cl00268"
/db_xref="CDD:206944"
misc_feature order(74403..74408,74418..74420,74508..74513,74517..74522,
74529..74531)
/gene="proS"
/locus_tag="CD196_0050"
/note="active site"
/db_xref="CDD:29813"
misc_feature order(74520..74522,74529..74531)
/gene="proS"
/locus_tag="CD196_0050"
/note="motif 3; other site"
/db_xref="CDD:29813"
misc_feature 74598..74825
/gene="proS"
/locus_tag="CD196_0050"
/note="ProRS Prolyl-anticodon binding domain, short
version found predominantly in bacteria. ProRS belongs to
class II aminoacyl-tRNA synthetases (aaRS). This alignment
contains the anticodon binding domain, which is
responsible for specificity in tRNA-binding; Region:
ProRS_anticodon_short; cd00861"
/db_xref="CDD:29801"
misc_feature order(74622..74627,74739..74741,74757..74759,74781..74783,
74808..74810,74814..74816)
/gene="proS"
/locus_tag="CD196_0050"
/note="anticodon binding site; other site"
/db_xref="CDD:29801"
gene 74947..76479
/locus_tag="CD196_0051"
/db_xref="GeneID:8466465"
CDS 74947..76479
/locus_tag="CD196_0051"
/note="catalyzes the formation of prolyl-tRNA(Pro) from
proline and tRNA(Pro)"
/codon_start=1
/transl_table=11
/product="prolyl-tRNA synthetase"
/protein_id="YP_003213104.1"
/db_xref="GI:260681819"
/db_xref="GeneID:8466465"
/translation="MYFIDTILSIYKDIKWCFFIKQINEEVIEMAKNEKQFVEEITKM
EDDFPQWYTDVITKTDLVDYAPVKGFMVVKPYGYALWEKMQEFMDKKFKETGHKNCYF
PLLIPESLLNKEAEHVEGFAPEVAWVTHGGNKKLEERLCVRPTSETIICTMYAKWLKS
YRELPYLYNQWCSVVRWEKSTRPFLRTSEFLWQEGHTLHETAEEAQEETIQQLEVYKA
LCEELLAMPVVAGQKSESEKFAGGERTYTIEAMMHDGKALQSGTSHFLGQHFTKAFDI
TFADREGNLANPYHTSWGASTRLIGGLIMTHSDNRGLVLPPRVAPIQVVIVPIAAKKG
NVMETVDKIYADLKTKGVAVEVDDRDNYTTGWKFNEWEMKGAPVRVEIGPKDIENNQA
MVFRRDTLEKDSMPLEGLADAICDLFDVIHNDMFEKARKHREDNTSIVENMDEFRKAL
EEKPGFIKTMWCGDAECEAKIKEETGATIRCLPFEQENLGHKCVYCGKEADSMVVMAK
AY"
misc_feature 75049..76476
/locus_tag="CD196_0051"
/note="prolyl-tRNA synthetase; Provisional; Region:
PRK08661"
/db_xref="CDD:181528"
misc_feature 75085..75864
/locus_tag="CD196_0051"
/note="Prolyl-tRNA synthetase (ProRS) class II core
catalytic domain. ProRS is a homodimer. It is responsible
for the attachment of proline to the 3' OH group of ribose
of the appropriate tRNA. This domain is primarily
responsible for ATP-dependent formation of...; Region:
ProRS_core_arch_euk; cd00778"
/db_xref="CDD:29823"
misc_feature order(75133..75138,75160..75171,75190..75192,75241..75249,
75253..75258,75319..75321,75325..75339,75403..75405,
75463..75465,75511..75513)
/locus_tag="CD196_0051"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29823"
misc_feature 75235..75258
/locus_tag="CD196_0051"
/note="motif 1; other site"
/db_xref="CDD:29823"
misc_feature order(75379..75381,75385..75387,75472..75474,75478..75480,
75499..75507,75514..75516,75520..75522,75526..75528,
75721..75723,75727..75732,75736..75738,75820..75828,
75832..75834,75838..75840)
/locus_tag="CD196_0051"
/note="active site"
/db_xref="CDD:29823"
misc_feature 75469..75480
/locus_tag="CD196_0051"
/note="motif 2; other site"
/db_xref="CDD:29823"
misc_feature 75826..75840
/locus_tag="CD196_0051"
/note="motif 3; other site"
/db_xref="CDD:29823"
misc_feature 75940..76476
/locus_tag="CD196_0051"
/note="ProRS Prolyl-anticodon binding domain, long version
found predominantly in eukaryotes and archaea. ProRS
belongs to class II aminoacyl-tRNA synthetases (aaRS).
This alignment contains the anticodon binding domain,
which is responsible for specificity in...; Region:
ProRS_anticodon_zinc; cd00862"
/db_xref="CDD:29802"
misc_feature order(76051..76053,76069..76071,76093..76095,76123..76125,
76129..76131)
/locus_tag="CD196_0051"
/note="anticodon binding site; other site"
/db_xref="CDD:29802"
misc_feature order(76330..76332,76345..76347,76423..76425,76432..76434)
/locus_tag="CD196_0051"
/note="zinc-binding site [ion binding]; other site"
/db_xref="CDD:29802"
gene 76919..78400
/gene="gltX"
/locus_tag="CD196_0052"
/db_xref="GeneID:8463313"
CDS 76919..78400
/gene="gltX"
/locus_tag="CD196_0052"
/note="Charges one glutamine molecule and pairs it to its
corresponding RNA trinucleotide during protein
translation"
/codon_start=1
/transl_table=11
/product="glutamyl-tRNA synthetase"
/protein_id="YP_003213105.1"
/db_xref="GI:260681820"
/db_xref="GeneID:8463313"
/translation="MNVRVRFAPSPTGFVHIGSLRTALYNYLFAKKMGGEYILRVEDT
DQSRLVEGAIENMLNAMKWAGVNHSEGVILDDSGKVVQKGEYGPYIQSQRLDIYQEYI
KQLLDSGKAYYCFCTKERLDEVRDAQRAAGETAKYDGHCKNLSKEEVEANIKAGIPYV
IRLRLPENHTIKFTDLVRGDMEFNTNDLDDQVLMKTDGFPTYHFAVVVDDYLMKITHV
IRGEEWVSSTPKHVYLYEAFGWEAPVFVHLPNILNKEKKKLSKRQGDVAVEDFKKKGY
LPEGLVNYVALVGWSPEDNQELFTMEELEKAFSVERVSKSGGVFDTEKLNWVNQHYIK
DGDDAYLTDLAIPFLVEDGFITEEEATNKYDFLKSMISVLKEKLQYVKEITEHASIFF
GDKIEVETEEGREFLRLEHIPTLIDALREKIEKTEVLNAEFVQAMLKEIQKEYKIKGK
NLFMGSRIILTGQMHGPDLPKVMEVLGKETCLNRIAYVKNNIL"
misc_feature 76919..78382
/gene="gltX"
/locus_tag="CD196_0052"
/note="glutamyl-tRNA synthetase; Reviewed; Region: gltX;
PRK01406"
/db_xref="CDD:179296"
misc_feature 76922..>77266
/gene="gltX"
/locus_tag="CD196_0052"
/note="catalytic core domain of discriminating
glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
/db_xref="CDD:173905"
misc_feature order(76934..76936,76940..76948,76970..76975,76979..76984,
77042..77044,77255..77257)
/gene="gltX"
/locus_tag="CD196_0052"
/note="active site"
/db_xref="CDD:173905"
misc_feature 76964..76975
/gene="gltX"
/locus_tag="CD196_0052"
/note="HIGH motif; other site"
/db_xref="CDD:173905"
misc_feature <77486..77920
/gene="gltX"
/locus_tag="CD196_0052"
/note="catalytic core domain of discriminating
glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
/db_xref="CDD:173905"
misc_feature order(77522..77524,77534..77536,77576..77581,77585..77590,
77663..77668,77690..77695)
/gene="gltX"
/locus_tag="CD196_0052"
/note="active site"
/db_xref="CDD:173905"
misc_feature 77690..77704
/gene="gltX"
/locus_tag="CD196_0052"
/note="KMSKS motif; other site"
/db_xref="CDD:173905"
gene 78915..80318
/gene="cysS"
/locus_tag="CD196_0053"
/db_xref="GeneID:8466172"
CDS 78915..80318
/gene="cysS"
/locus_tag="CD196_0053"
/codon_start=1
/transl_table=11
/product="cysteinyl-tRNA synthetase"
/protein_id="YP_003213106.1"
/db_xref="GI:260681821"
/db_xref="GeneID:8466172"
/translation="MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARP
FIIFDTLRRYLEYRGYDVTYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCD
GLGIKRATVHPQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQ
EDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLG
ETIDIHAGGQDLTFPHHENEIAQSEARSGKIFSKYWMHNGYININDEKMSKSKGNFFT
VRDISKLYDLEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLV
ESPLTEKEVELVKELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEF
AKKCLDEFNELTGVLNIVNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLD
MGIVLEDTRQGVKWKRI"
misc_feature 78915..80315
/gene="cysS"
/locus_tag="CD196_0053"
/note="cysteinyl-tRNA synthetase; Validated; Region: cysS;
PRK00260"
/db_xref="CDD:178951"
misc_feature 78924..>79259
/gene="cysS"
/locus_tag="CD196_0053"
/note="catalytic core domain of cysteinyl tRNA synthetase;
Region: CysRS_core; cd00672"
/db_xref="CDD:173899"
misc_feature order(78999..79010,79026..79028,79032..79037,79044..79049,
79113..79115,79119..79121)
/gene="cysS"
/locus_tag="CD196_0053"
/note="active site"
/db_xref="CDD:173899"
misc_feature 79026..79037
/gene="cysS"
/locus_tag="CD196_0053"
/note="HIGH motif; other site"
/db_xref="CDD:173899"
misc_feature <79527..79829
/gene="cysS"
/locus_tag="CD196_0053"
/note="catalytic core domain of cysteinyl tRNA synthetase;
Region: CysRS_core; cd00672"
/db_xref="CDD:173899"
misc_feature 79710..79724
/gene="cysS"
/locus_tag="CD196_0053"
/note="KMSKS motif; other site"
/db_xref="CDD:173899"
misc_feature 79830..80312
/gene="cysS"
/locus_tag="CD196_0053"
/note="Anticodon-binding domain of cysteinyl tRNA
synthetases; Region: Anticodon_Ia_Cys; cd07963"
/db_xref="CDD:153417"
misc_feature order(79836..79838,79845..79847,79857..79859,79866..79868,
79875..79877,79884..79886,80007..80009,80013..80018,
80025..80027,80034..80039,80046..80048,80055..80057,
80199..80201,80211..80213,80226..80228,80238..80240,
80247..80249,80274..80285,80307..80309)
/gene="cysS"
/locus_tag="CD196_0053"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153417"
misc_feature order(80199..80201,80211..80213,80226..80228,80238..80240,
80247..80249,80277..80285)
/gene="cysS"
/locus_tag="CD196_0053"
/note="anticodon binding site; other site"
/db_xref="CDD:153417"
gene 80321..80716
/locus_tag="CD196_0054"
/db_xref="GeneID:8465993"
CDS 80321..80716
/locus_tag="CD196_0054"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213107.1"
/db_xref="GI:260681822"
/db_xref="GeneID:8465993"
/translation="MEKTELVTMSPLVLAYLGDTVYETYIREYLIRQNTQRKVNDLHK
LAIKYVKAKAQATIIHEIEIELTEEESKIYKRGRNQKSNTSPKNADIIDYKHATGFEA
LVGYLYLNNEIERLQYIINKGIKIIERDM"
misc_feature 80360..80713
/locus_tag="CD196_0054"
/note="RIBOc. Ribonuclease III C terminal domain. This
group consists of eukaryotic, bacterial and archeal
ribonuclease III (RNAse III) proteins. RNAse III is a
double stranded RNA-specific endonuclease. Prokaryotic
RNAse III is important in...; Region: RIBOc; cd00593"
/db_xref="CDD:29697"
misc_feature order(80363..80365,80375..80377,80612..80614,80621..80623)
/locus_tag="CD196_0054"
/note="active site"
/db_xref="CDD:29697"
misc_feature order(80363..80365,80612..80614,80621..80623)
/locus_tag="CD196_0054"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:29697"
misc_feature order(80366..80371,80378..80380,80387..80392,80399..80404,
80408..80416,80444..80446,80642..80644,80669..80671)
/locus_tag="CD196_0054"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29697"
gene 81224..82054
/locus_tag="CD196_0055"
/db_xref="GeneID:8463314"
CDS 81224..82054
/locus_tag="CD196_0055"
/codon_start=1
/transl_table=11
/product="thymidylate synthase"
/protein_id="YP_003213108.1"
/db_xref="GI:260681823"
/db_xref="GeneID:8463314"
/translation="MSLADKIFIDMCNNILENGVSSDGEVVRAKWDDGQPAHTIKKFC
VVNRYDLSKEFPILTLRPTNLKAAIDELLWIWQKKSNNINDLNSRIWDSWADETGSIG
KAYGYQIGQKHKYKEGEFDQIDRVIYDLKYNPYSRRIITNIYNHNDLNEMNLYPCAYS
MTFNVTGNRLNAILNQRSNDILVANNWNVTQYAILVHMLAQISDLEVGELVHVIADAH
IYDRHIPLVKELINRESYDAPKLIINPNIKNFYDFRVEDFTLENYKSGPQIKKIPVAI
"
misc_feature 81245..81907
/locus_tag="CD196_0055"
/note="Thymidylate synthase and pyrimidine
hydroxymethylase: Thymidylate synthase (TS) and
deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs
that catalyze analogous alkylation of C5 of pyrimidine
nucleotides. Both enzymes are involved in the...; Region:
TS_Pyrimidine_HMase; cd00351"
/db_xref="CDD:58645"
misc_feature order(81281..81283,81320..81322,81344..81346,81350..81352,
81632..81637,81656..81661,81701..81703,81707..81709,
81719..81721,81746..81748,81752..81757,81866..81871)
/locus_tag="CD196_0055"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:58645"
misc_feature order(81323..81325,81434..81436,81494..81496,81503..81505,
81536..81538,81692..81697,81749..81757,81761..81763,
81782..81787,81875..81877,81881..81883)
/locus_tag="CD196_0055"
/note="active site"
/db_xref="CDD:58645"
gene 82067..82561
/locus_tag="CD196_0056"
/db_xref="GeneID:8463315"
CDS 82067..82561
/locus_tag="CD196_0056"
/codon_start=1
/transl_table=11
/product="dihydrofolate reductase region"
/protein_id="YP_003213109.1"
/db_xref="GI:260681824"
/db_xref="GeneID:8463315"
/translation="MKVIVAVDLNWGIGYGGKLLQSIPEDMKFFKEKTVGNVVVMGRE
TFKSLPGKKALKDRVNIVLTRSKSFNDDRLIVCNSIDETLKELQKYENDKIFIIGGET
VYKQFLPYCNELYVTKIQKTYEADRFFPNIDIMSNWDLIKESEVKEYNNIRYVFSTYI
NNSL"
misc_feature 82067..82546
/locus_tag="CD196_0056"
/note="Dihydrofolate reductase (DHFR). Reduces
7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH
as a cofactor. This is an essential step in the
biosynthesis of deoxythymidine phosphate since
5,6,7,8-tetrahydrofolate is required to regenerate 5;
Region: DHFR; cd00209"
/db_xref="CDD:29264"
misc_feature order(82076..82078,82127..82129,82142..82144,82238..82240,
82358..82360,82376..82378,82415..82417)
/locus_tag="CD196_0056"
/note="folate binding site [chemical binding]; other site"
/db_xref="CDD:29264"
misc_feature order(82082..82084,82103..82105,82193..82201,82259..82261,
82361..82372)
/locus_tag="CD196_0056"
/note="NADP+ binding site [chemical binding]; other site"
/db_xref="CDD:29264"
gene 82588..83964
/locus_tag="CD196_0057"
/db_xref="GeneID:8463316"
CDS 82588..83964
/locus_tag="CD196_0057"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213110.1"
/db_xref="GI:260681825"
/db_xref="GeneID:8463316"
/translation="MKKDIFVNRVSNALENDRGAVFVGSGISFSSTEVDWFKLLEPLV
NELDITLDNKSDDLPMIAQYIVNNYSGNRGPLVNEISKTFNRKFKLNKYHKYLATTKL
STIWTTNYDMLLEDAFYDFDTSVKVSDDSITRNRLEYDVEIIKMHGCISRSDWNEIVI
TQEDYDDFSINKPAISQRLSEDLINKSFLFIGYSYRDPNIRNIMINARRLSKKHTQQH
YIILKKLKDSDSNITQDDVVRQELWCNDLKRLGISTLFIDEYSELEELLREISQKSRG
KTVYVTGSHKESNMNARKLGTKLAKHKDITLLSGQSSGIGSEVVAAFTEECIKSKEDI
INRMKIFPNPYSADEKYSDDITLIPDLKKCRTKMLNSTQVVVVFSGGIGTEAEIDVAI
KQNCNIIPVITCKEDRENPAIKKILNYSDNMKNIEIKDATYYNKIVDEDGVVTMEEIY
ICISKIMN"
misc_feature 82894..83274
/locus_tag="CD196_0057"
/note="SIR2-like domain; Region: SIR2_2; pfam13289"
/db_xref="CDD:205469"
gene 84291..85040
/locus_tag="CD196_0058"
/db_xref="GeneID:8463317"
CDS 84291..85040
/locus_tag="CD196_0058"
/codon_start=1
/transl_table=11
/product="thiamine biosynthesis protein thic"
/protein_id="YP_003213111.1"
/db_xref="GI:260681826"
/db_xref="GeneID:8463317"
/translation="MENGVGMITIHPTANKQIFEDSKNRMVPVTSRGGGMVIQDLISK
NFSEDNVYLKILPEIIKYAQKHNVCISLGATFRSGNIFDSNDRAQITEIKSQIELAKR
IYKSNVGVIIESPGHSRPSDIIKISSILKKEGFPIMPLGPIPTDIAIGMDHIAAAIGA
TIMGIEGCANIISTVTREEHTGGRPSIESTVESIRTAKIAAHIIDIHQMNDINLDMSV
SKSRAKSNTCIFGKDTRYCDRCRELCPLCIR"
misc_feature <84291..84962
/locus_tag="CD196_0058"
/note="ThiC family; Region: ThiC; cl08031"
/db_xref="CDD:208807"
gene 85206..85508
/locus_tag="CD196_0059"
/pseudo
/db_xref="GeneID:8463318"
gene 85512..86258
/locus_tag="CD196_0060"
/db_xref="GeneID:8463319"
CDS 85512..86258
/locus_tag="CD196_0060"
/codon_start=1
/transl_table=11
/product="tRNA/rRNA methyltransferase"
/protein_id="YP_003213112.1"
/db_xref="GI:260681827"
/db_xref="GeneID:8463319"
/translation="MNNLASIEGRNPVIEAIKSDREIDKILIANSAKEGSIKKIIGMA
KDKNIIIQYVDKHKLDEVSTSHSHQGVIAYASEYKYYELDELIDLAKNKDEDPFFIIL
DEITDPHNLGSIIRTADAVGAHGVIIPKRRSVHITPVVAKASAGAVEYMPVCKVTNIV
NTIKRLKEEGLWIAAADMDGETFYKQNLTGPLGVVIGSEGFGISRLVKQNCDFIVKMP
MIGNVTSLNASVAGGILLYEIFRQRLDKSK"
misc_feature 85530..86240
/locus_tag="CD196_0060"
/note="rRNA methylase, putative, group 3; Region:
rRNA_methyl_3; TIGR00186"
/db_xref="CDD:129290"
misc_feature 85530..85748
/locus_tag="CD196_0060"
/note="RNA 2'-O ribose methyltransferase substrate
binding; Region: SpoU_sub_bind; pfam08032"
/db_xref="CDD:203842"
misc_feature 85800..86222
/locus_tag="CD196_0060"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
pfam00588"
/db_xref="CDD:201328"
gene 86261..86788
/locus_tag="CD196_0061"
/db_xref="GeneID:8463320"
CDS 86261..86788
/locus_tag="CD196_0061"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213113.1"
/db_xref="GI:260681828"
/db_xref="GeneID:8463320"
/translation="MKKNINHYLIIDGYNIINAWDNLKELAKEDLEDSREKLIDDIIE
FSEFMGYKTIIVFDAYNVKNSREKVEKRKHITIVYTREHQTADSYIEKFITSLSKYDD
VKVATNDYAEQQMILGKGATRMSARELKLELDRSKNKMKEKNIGLRKKIQRNWLEERL
DKETLSKLENIRRKR"
misc_feature 86285..86779
/locus_tag="CD196_0061"
/note="YacP-like NYN domain; Region: NYN_YacP; pfam05991"
/db_xref="CDD:203367"
gene 86838..87500
/gene="sigH"
/locus_tag="CD196_0062"
/db_xref="GeneID:8463321"
CDS 86838..87500
/gene="sigH"
/locus_tag="CD196_0062"
/note="DNA-dependent RNA polymerase catalyzes the
transcription of DNA into RNA using the four
ribonucleoside triphosphates as substrates"
/codon_start=1
/transl_table=11
/product="RNA polymerase factor sigma-70"
/protein_id="YP_003213114.1"
/db_xref="GI:260681829"
/db_xref="GeneID:8463321"
/translation="MGEIYMLVAKEKSYELVDNCQQDEYNIVLRASEGDKIALEYIIT
KYRNFVKAKAKSYFLIGADKEDIIQEGMIGLYKAVRDFDGSKTNSFKCFAEICITRQI
ITAIKTATRQKHIPLNSYVSLNKPIYDEESDRTLLDIIATSIVTDPEELIISKEELKN
IESKMNELLSDLELEVLELYLNGKSYQFIADKLKRDVKSIDNALQRVKRKLEKHLENR
ND"
misc_feature 86898..87485
/gene="sigH"
/locus_tag="CD196_0062"
/note="RNA polymerase sigma-H factor; Region: spore_sigH;
TIGR02859"
/db_xref="CDD:131906"
misc_feature 86961..87173
/gene="sigH"
/locus_tag="CD196_0062"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
gene 87574..88767
/locus_tag="CD196_0063"
/db_xref="GeneID:8466634"
CDS 87574..88767
/locus_tag="CD196_0063"
/note="EF-Tu; promotes GTP-dependent binding of
aminoacyl-tRNA to the A-site of ribosomes during protein
biosynthesis; when the tRNA anticodon matches the mRNA
codon, GTP hydrolysis results; the inactive EF-Tu-GDP
leaves the ribosome and release of GDP is promoted by
elongation factor Ts; many prokaryotes have two copies of
the gene encoding EF-Tu"
/codon_start=1
/transl_table=11
/product="elongation factor Tu"
/protein_id="YP_003213115.1"
/db_xref="GI:260681830"
/db_xref="GeneID:8466634"
/translation="MAKAKYERTKPHVNIGTIGHVDHGKTTLTAAITKTLYDRYQLGE
AVDFANIDKAPEERERGITISTAHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDG
AILVCSATDGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLT
EYDFPGDDTPIVRGSALMALEDPKSEWGDKIVELFEQIDEYIPAPERDTDKPFLMPVE
DVFSITGRGTVATGRVERGVLKVQDEVELVGLTEAPRKVVVTGVEMFRKLLDQAQAGD
NIGALLRGVQRNEIERGQVLAKTGSVKAHTKFTAEVYVLKKEEGGRHTPFFDGYRPQF
YFRTTDVTGACKLPEGIEMVMPGDNVTMEVDLINSIVVEEGLRFSIREGGRTVASGVV
ATIIE"
misc_feature 87574..88764
/locus_tag="CD196_0063"
/note="elongation factor Tu; Reviewed; Region: PRK00049"
/db_xref="CDD:178823"
misc_feature 87604..88188
/locus_tag="CD196_0063"
/note="Elongation Factor Tu (EF-Tu) GTP-binding proteins;
Region: EF_Tu; cd01884"
/db_xref="CDD:206671"
misc_feature 87628..87651
/locus_tag="CD196_0063"
/note="G1 box; other site"
/db_xref="CDD:206671"
misc_feature order(87631..87633,87637..87639,87649..87654,87661..87663,
87670..87675,87685..87687,87772..87777,87829..87834,
87901..87906,87910..87921,87928..87930,88021..88023,
88033..88035,88111..88116)
/locus_tag="CD196_0063"
/note="GEF interaction site [polypeptide binding]; other
site"
/db_xref="CDD:206671"
misc_feature order(87637..87654,87715..87717,87982..87987,87991..87993,
88096..88104)
/locus_tag="CD196_0063"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206671"
misc_feature 87742..87774
/locus_tag="CD196_0063"
/note="Switch I region; other site"
/db_xref="CDD:206671"
misc_feature 87760..87762
/locus_tag="CD196_0063"
/note="G2 box; other site"
/db_xref="CDD:206671"
misc_feature 87817..87828
/locus_tag="CD196_0063"
/note="G3 box; other site"
/db_xref="CDD:206671"
misc_feature 87823..87879
/locus_tag="CD196_0063"
/note="Switch II region; other site"
/db_xref="CDD:206671"
misc_feature 87982..87993
/locus_tag="CD196_0063"
/note="G4 box; other site"
/db_xref="CDD:206671"
misc_feature 88096..88104
/locus_tag="CD196_0063"
/note="G5 box; other site"
/db_xref="CDD:206671"
misc_feature 88210..88473
/locus_tag="CD196_0063"
/note="EFTU_II: Elongation factor Tu domain II. Elongation
factors Tu (EF-Tu) are three-domain GTPases with an
essential function in the elongation phase of mRNA
translation. The GTPase center of EF-Tu is in the
N-terminal domain (domain I), also known as the...;
Region: EFTU_II; cd03697"
/db_xref="CDD:58088"
misc_feature 88480..88749
/locus_tag="CD196_0063"
/note="Domain III of elongation factor (EF) Tu. Ef-Tu
consists of three structural domains, designated I, II and
III. Domain III adopts a beta barrel structure. Domain III
is involved in binding to both charged tRNA and binding to
elongation factor Ts (EF-Ts); Region: EFTU_III; cd03707"
/db_xref="CDD:58073"
misc_feature order(88516..88518,88522..88530,88582..88584,88702..88710,
88738..88740)
/locus_tag="CD196_0063"
/note="Antibiotic Binding Site [chemical binding]; other
site"
/db_xref="CDD:58073"
gene 89017..89166
/gene="rpmG"
/locus_tag="CD196_0064"
/db_xref="GeneID:8463322"
CDS 89017..89166
/gene="rpmG"
/locus_tag="CD196_0064"
/note="in Escherichia coli BM108, a mutation that results
in lack of L33 synthesis had no effect on ribosome
synthesis or function; there are paralogous genes in
several bacterial genomes, and a CXXC motif for zinc
binding and an upstream regulation region of the paralog
lacking this motif that are regulated by zinc similar to
other ribosomal proteins like L31; the proteins in this
group have the CXXC motif"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L33"
/protein_id="YP_003213116.1"
/db_xref="GI:260681831"
/db_xref="GeneID:8463322"
/translation="MRVKVTLACTECKQRNYNTTKNKKNNPDRIELQKYCRFCKKHTT
HKETK"
misc_feature 89017..89163
/gene="rpmG"
/locus_tag="CD196_0064"
/note="50S ribosomal protein L33; Validated; Region: rpmG;
PRK00504"
/db_xref="CDD:179049"
gene 89192..89413
/gene="secE"
/locus_tag="CD196_0065"
/db_xref="GeneID:8466574"
CDS 89192..89413
/gene="secE"
/locus_tag="CD196_0065"
/codon_start=1
/transl_table=11
/product="preprotein translocase SecE subunit"
/protein_id="YP_003213117.1"
/db_xref="GI:260681832"
/db_xref="GeneID:8466574"
/translation="MAAQKNDGAKTKKRFSLFGYLKETKQELKRVTWPTKKELFKNTS
IVLTVVISCTILVWGIDTILSGALALLLK"
misc_feature 89237..89404
/gene="secE"
/locus_tag="CD196_0065"
/note="SecE/Sec61-gamma subunits of protein translocation
complex; Region: SecE; pfam00584"
/db_xref="CDD:201325"
gene 89433..89975
/gene="nusG"
/locus_tag="CD196_0066"
/db_xref="GeneID:8466623"
CDS 89433..89975
/gene="nusG"
/locus_tag="CD196_0066"
/codon_start=1
/transl_table=11
/product="transcription antitermination protein"
/protein_id="YP_003213118.1"
/db_xref="GI:260681833"
/db_xref="GeneID:8466623"
/translation="MSELQEASWYVVHTYSGHENKVKATIEKAVKTRGMEDCIRQVVV
PTEEVVETTKTGKEKTRQRKVYPSYVLVKMIITDESWYVVRNTKGVTGFVGPGSKPVP
LSEDEVKAMGIDTTDPKVVNSDVDFEIGDTVKVSQGPFSGQIGNIEEIDLENREVKVC
INAFGKRTLFVIELEGIEKI"
misc_feature 89436..89972
/gene="nusG"
/locus_tag="CD196_0066"
/note="transcription antitermination protein NusG;
Validated; Region: nusG; PRK05609"
/db_xref="CDD:180161"
misc_feature 89457..89765
/gene="nusG"
/locus_tag="CD196_0066"
/note="Bacterial N-Utilization Substance G (NusG)
N-terminal (NGN) domain, subgroup 1; Region: NGN_Bact_1;
cd09891"
/db_xref="CDD:193580"
misc_feature order(89463..89465,89565..89567,89628..89630,89637..89639,
89643..89645,89739..89741,89763..89765)
/gene="nusG"
/locus_tag="CD196_0066"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:193580"
misc_feature 89808..89885
/gene="nusG"
/locus_tag="CD196_0066"
/note="KOW (Kyprides, Ouzounis, Woese) motif; Region: KOW;
smart00739"
/db_xref="CDD:128978"
gene 90011..90436
/gene="rplK"
/locus_tag="CD196_0067"
/db_xref="GeneID:8466387"
CDS 90011..90436
/gene="rplK"
/locus_tag="CD196_0067"
/note="binds directly to 23S ribosomal RNA"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L11"
/protein_id="YP_003213119.1"
/db_xref="GI:260681834"
/db_xref="GeneID:8466387"
/translation="MAKKVIGQIKLQIPAGKATPAPPVGPALGQHGVNIMGFTKEFNA
KTADQAGMIIPVVITVYQDRSFSFITKTPPAAVLIKKALNLKSGSGEPNKKKVAKMTS
AQVREIAELKMPDLNAASVEAAMSMIAGTARSMGVVIED"
misc_feature 90011..90433
/gene="rplK"
/locus_tag="CD196_0067"
/note="50S ribosomal protein L11; Validated; Region: rplK;
PRK00140"
/db_xref="CDD:178895"
misc_feature 90035..90427
/gene="rplK"
/locus_tag="CD196_0067"
/note="Ribosomal protein L11. Ribosomal protein L11,
together with proteins L10 and L7/L12, and 23S rRNA, form
the L7/L12 stalk on the surface of the large subunit of
the ribosome. The homologous eukaryotic cytoplasmic
protein is also called 60S ribosomal...; Region:
Ribosomal_L11; cd00349"
/db_xref="CDD:100101"
misc_feature order(90038..90040,90098..90100,90230..90238,90248..90250,
90269..90271,90344..90346,90359..90367,90377..90379,
90386..90391,90398..90403,90407..90415)
/gene="rplK"
/locus_tag="CD196_0067"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:100101"
misc_feature order(90038..90040,90179..90181,90185..90196,90206..90208,
90212..90217,90347..90352,90359..90364)
/gene="rplK"
/locus_tag="CD196_0067"
/note="L7/L12 interface [polypeptide binding]; other site"
/db_xref="CDD:100101"
misc_feature order(90086..90088,90098..90100)
/gene="rplK"
/locus_tag="CD196_0067"
/note="putative thiostrepton binding site; other site"
/db_xref="CDD:100101"
misc_feature order(90287..90289,90296..90298)
/gene="rplK"
/locus_tag="CD196_0067"
/note="L25 interface [polypeptide binding]; other site"
/db_xref="CDD:100101"
gene 90506..91204
/gene="rplA"
/locus_tag="CD196_0068"
/db_xref="GeneID:8466555"
CDS 90506..91204
/gene="rplA"
/locus_tag="CD196_0068"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L1"
/protein_id="YP_003213120.1"
/db_xref="GI:260681835"
/db_xref="GeneID:8466555"
/translation="MAKKGKRYAGALQKVDRTKFYDASEALTLVSDIAGAKFDETVEA
HIKLGVDSRHADQQVRGAVVLPHGTGKTKRVLVFAKGEKAKEAEQAGADFVGAEELVQ
KIQGENWFDFDIVVATPDMMGVVGRLGRVLGPKGLMPNPKSGTVTFDVAKAIDEIKAG
KVEYRLDKTNIIHVPVGKVSFGGEKLTENFTALMDAIIKAKPAAAKGQYLRSITVASS
MGPGVKINPARTAE"
misc_feature 90578..91180
/gene="rplA"
/locus_tag="CD196_0068"
/note="Ribosomal protein L1. The L1 protein, located near
the E-site of the ribosome, forms part of the L1 stalk
along with 23S rRNA. In bacteria and archaea, L1
functions both as a ribosomal protein that binds rRNA, and
as a translation repressor that binds...; Region:
Ribosomal_L1; cd00403"
/db_xref="CDD:88601"
misc_feature order(90611..90619,90626..90628,90632..90634,90638..90640,
90644..90646,91010..91012,91016..91018,91022..91024,
91160..91165,91169..91171)
/gene="rplA"
/locus_tag="CD196_0068"
/note="mRNA/rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88601"
gene 91427..91933
/gene="rplJ"
/locus_tag="CD196_0069"
/db_xref="GeneID:8466547"
CDS 91427..91933
/gene="rplJ"
/locus_tag="CD196_0069"
/note="binds the two ribosomal protein L7/L12 dimers and
anchors them to the large ribosomal subunit"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L10"
/protein_id="YP_003213121.1"
/db_xref="GI:260681836"
/db_xref="GeneID:8466547"
/translation="MRKAIEIKSEVVSEIVEKLQKSSAAVVVDYKGLTVEEVTELRKQ
MREAGVDYKVYKNTLVRRAAKEVGIEQFNDELLVGTNAIAFGYDDPVAPARILKGFMD
SHPKMKLKMGIVEGAFYDESKIVEMANIPSREVLIAKLLGSLKAPVSNFAYLIDAIAK
KAEGQEEA"
misc_feature 91481..91909
/gene="rplJ"
/locus_tag="CD196_0069"
/note="Ribosomal protein L10 family, L10 subfamily;
composed of bacterial 50S ribosomal protein and eukaryotic
mitochondrial 39S ribosomal protein, L10. L10 occupies the
L7/L12 stalk of the ribosome. The N-terminal domain (NTD)
of L10 interacts with L11 protein...; Region:
Ribosomal_L10; cd05797"
/db_xref="CDD:88597"
misc_feature order(91592..91603,91610..91612)
/gene="rplJ"
/locus_tag="CD196_0069"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88597"
misc_feature order(91697..91699,91766..91768,91775..91777,91823..91825,
91832..91837,91844..91849,91853..91870,91874..91882,
91889..91894,91898..91903,91907..91909)
/gene="rplJ"
/locus_tag="CD196_0069"
/note="Interface with L7/L12 ribosomal proteins
[polypeptide binding]; other site"
/db_xref="CDD:88597"
gene 91991..92356
/gene="rplL"
/locus_tag="CD196_0070"
/db_xref="GeneID:8466554"
CDS 91991..92356
/gene="rplL"
/locus_tag="CD196_0070"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L7/L12"
/protein_id="YP_003213122.1"
/db_xref="GI:260681837"
/db_xref="GeneID:8466554"
/translation="MTIEQILEAIENMKVLELNELVKAAEEKFGVSASAPVMVAGAAA
GGPAAEEKTEFDVVLTDVGSSKVGVIKAVREITGLGLKEAKEVVDNAPKTVKEGASKE
EADQIKEKLEAAGAKVEVK"
misc_feature 91991..92350
/gene="rplL"
/locus_tag="CD196_0070"
/note="Ribosomal protein L7/L12. Ribosomal protein L7/L12
refers to the large ribosomal subunit proteins L7 and L12,
which are identical except that L7 is acetylated at the N
terminus. It is a component of the L7/L12 stalk, which is
located at the surface of...; Region: Ribosomal_L7_L12;
cd00387"
/db_xref="CDD:100102"
misc_feature order(91991..91993,92030..92038,92045..92050,92057..92059,
92066..92068,92111..92113,92120..92125,92129..92137,
92147..92152,92213..92215,92219..92224,92228..92230,
92234..92239,92279..92284,92288..92290,92297..92299)
/gene="rplL"
/locus_tag="CD196_0070"
/note="core dimer interface [polypeptide binding]; other
site"
/db_xref="CDD:100102"
misc_feature order(92000..92002,92009..92011,92021..92023,92060..92062,
92075..92077)
/gene="rplL"
/locus_tag="CD196_0070"
/note="peripheral dimer interface [polypeptide binding];
other site"
/db_xref="CDD:100102"
misc_feature order(92042..92044,92051..92056,92066..92068,92075..92077)
/gene="rplL"
/locus_tag="CD196_0070"
/note="L10 interface [polypeptide binding]; other site"
/db_xref="CDD:100102"
misc_feature order(92186..92191,92198..92203,92210..92212,92231..92236,
92243..92245)
/gene="rplL"
/locus_tag="CD196_0070"
/note="L11 interface [polypeptide binding]; other site"
/db_xref="CDD:100102"
misc_feature order(92189..92191,92201..92203,92210..92212,92231..92236,
92243..92245)
/gene="rplL"
/locus_tag="CD196_0070"
/note="putative EF-Tu interaction site [polypeptide
binding]; other site"
/db_xref="CDD:100102"
misc_feature order(92189..92191,92198..92203,92210..92212)
/gene="rplL"
/locus_tag="CD196_0070"
/note="putative EF-G interaction site [polypeptide
binding]; other site"
/db_xref="CDD:100102"
gene 92748..93536
/locus_tag="CD196_0071"
/db_xref="GeneID:8466556"
CDS 92748..93536
/locus_tag="CD196_0071"
/codon_start=1
/transl_table=11
/product="NADP-dependent 7-alpha-hydroxysteroid
dehydrogenase"
/protein_id="YP_003213123.1"
/db_xref="GI:260681838"
/db_xref="GeneID:8466556"
/translation="MEKLQGKIAVVTAATKGIGLASAEILAKNGATVYLAARSEELAN
EVINKISAEGGCAKFVYFNAREEETFTSMIEEVVKKEGKIDILVNNFGSTNPSLDKDL
VTGDTDNFFDTVNTNLKSVYLPCKAAIPHMIKNGKGSIVNISSIGSVLPDLSRIAYCV
SKAAINSLTQNIATQYAKDNVRCNAVLPGLIATKAALDNMSPEFIKEFLKHVPLNRIG
EPDDIAKAVLFYASDDSSFITGDLLEVAGGFGLPTPQFADNILG"
misc_feature 92754..93500
/locus_tag="CD196_0071"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature 92772..93482
/locus_tag="CD196_0071"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(92784..92786,92790..92801,92856..92864,92931..92939,
93015..93023,93093..93095,93174..93182,93219..93221,
93231..93233,93309..93320,93324..93329)
/locus_tag="CD196_0071"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(93096..93098,93180..93182,93219..93221,93231..93233)
/locus_tag="CD196_0071"
/note="active site"
/db_xref="CDD:212491"
gene 94007..97723
/gene="rpoB"
/locus_tag="CD196_0072"
/db_xref="GeneID:8463323"
CDS 94007..97723
/gene="rpoB"
/locus_tag="CD196_0072"
/note="DNA-dependent RNA polymerase catalyzes the
transcription of DNA into RNA using the four
ribonucleoside triphosphates as substrates; beta subunit
is part of the catalytic core which binds with a sigma
factor to produce the holoenzyme"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit beta"
/protein_id="YP_003213124.1"
/db_xref="GI:260681839"
/db_xref="GeneID:8463323"
/translation="MPHPVTIGKRTRMSFSKIKEIADVPNLIEIQVDSYEWFLKEGLK
EVFDDISPIEDYTGNLILEFVDYSLDDKPKYDIEECKERDATYCAPLKVKVRLINKET
GEIKEQEVFMGDFPLMTERGTFVINGAERVIVSQLVRSPGVYYAEERDKTGKRLISST
VIPNRGAWLEYETDSNDVISVRVDRTRKQPVTVLLRALGIGTDAEIIDLLGEDERLSA
TLEKDNTKTVEEGLVEIYKKLRPGEPPTVESASSLLNALFFDPKRYDLAKVGRYKFNK
KLALCYRIMNKISAEDIINPETGEVFVKAGEKISYDLAKAIQNAGINVVNLLMDDDKK
VRVIGNNFVDIKSHIDFDIDDLNIKEKVHYPTLKEILDGYSDEEEIKEAIKSRIKELI
PKHILLDDIIASISYEFNIFYNIGNIDDIDHLGNRRIRSVGELLQNQVRIGLSRMERV
IKERMTVQDMEAITPQALVNIRPVSAAIKEFFGSSQLSQFMDQTNPLSELTHKRRLSA
LGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLGTYAKINEFGFIESP
YRKFDKETSTVTDEIHYLTADEEDLFVRAQANEPLTEDGKFVNHRVVCRTVNGAVEMV
PESRVDYMDISPKQVVSVATAMIPFLENDDANRALMGANMQRQAVPLVRREAPIIGTG
IEYRAAKDSGAVVVARNSGIAERVTADEIIIKREDGNRDRYNLLKFKRSNSGTCINQT
PIINKGDQIIKGDVIADGPATDLGEVALGRNCLIAFMTWEGYNYEDAILINERLVKED
RLSTIHIEEYECEARDTKLGPEEITRDIPNVGDSAIKNLDDRGIIRIGAEVDSGDILV
GKVTPKGETELTAEERLLRAIFGEKAREVRDTSLKVPHGESGIIVDVKVFTRENGDDL
SPGVNELVRCYIAKKRKIKVGDKMAGRHGNKGVISRVLPEEDMPFMENGTPLDIILNP
QGIPSRMNIGQVLEVHLGLAAKTLGWYVATSVFDGANEYDIMDALEEAGYPRDGKLTL
YDGRTGQSFDNRITVGYMYYLKLHHLVDEKLHARSTGPYSLVTQQPLGGKAQFGGQRF
GEMEVWALEAYGAAHILQEILTVKSDDVVGRVRTYEAIVKGENIPEPGIPESFKVLIK
ELQSLCLDVKVLTDEDQEIEVRESVDEDDTIGEFELDVVNHMGEVEESNIIEEIEDDF
VEATEDEDIENLEEFTEDDLFEEEIDFESDDFDM"
misc_feature 94085..>94573
/gene="rpoB"
/locus_tag="CD196_0072"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cl04593"
/db_xref="CDD:156170"
misc_feature 94421..>94846
/gene="rpoB"
/locus_tag="CD196_0072"
/note="RNA polymerase Rpb2, domain 2; Region:
RNA_pol_Rpb2_2; pfam04561"
/db_xref="CDD:203048"
misc_feature <95144..>96076
/gene="rpoB"
/locus_tag="CD196_0072"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cd00653"
/db_xref="CDD:73223"
misc_feature <95174..97498
/gene="rpoB"
/locus_tag="CD196_0072"
/note="DNA-directed RNA polymerase subunit beta; Reviewed;
Region: rpoB; PRK00405"
/db_xref="CDD:179007"
misc_feature <95810..97477
/gene="rpoB"
/locus_tag="CD196_0072"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cd00653"
/db_xref="CDD:73223"
misc_feature order(95903..95905,95957..95965,95969..95971,96332..96343,
96350..96352,96356..96364,96839..96841,96845..96847,
96851..96853,96917..96919,96923..96925,96932..96934,
96941..96943,96956..96958,96968..96970,97019..97021,
97100..97102,97124..97132,97136..97138,97175..97177,
97184..97192,97196..97201,97262..97270,97280..97282,
97286..97291,97295..97297,97301..97318,97322..97339,
97349..97351,97418..97420,97430..97432,97436..97438,
97442..97447,97451..97453,97457..97468,97472..97474)
/gene="rpoB"
/locus_tag="CD196_0072"
/note="RPB1 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(96221..96226,96317..96319,96323..96325,96386..96388,
96395..96397,96866..96868,96905..96907,96986..96991,
96995..96997,97088..97090,97139..97141)
/gene="rpoB"
/locus_tag="CD196_0072"
/note="RPB10 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(96350..96352,96392..96394,96863..96865,97106..97108)
/gene="rpoB"
/locus_tag="CD196_0072"
/note="RPB11 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(96392..96397,96407..96409,96785..96787,96791..96793,
96866..96874,96881..96883,96887..96892,97103..97126,
97130..97132)
/gene="rpoB"
/locus_tag="CD196_0072"
/note="RPB3 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(96407..96409,96518..96520,96524..96526,96536..96544,
96548..96550)
/gene="rpoB"
/locus_tag="CD196_0072"
/note="RPB12 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
gene 97765..101250
/gene="rpoC"
/locus_tag="CD196_0073"
/db_xref="GeneID:8466578"
CDS 97765..101250
/gene="rpoC"
/locus_tag="CD196_0073"
/note="DNA-dependent RNA polymerase catalyzes the
transcription of DNA into RNA using the four
ribonucleoside triphosphates as substrates. Subunit beta'
binds to sigma factor allowing it to bind to the -10
region of the promoter"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit beta'"
/protein_id="YP_003213125.1"
/db_xref="GI:260681840"
/db_xref="GeneID:8466578"
/translation="MFELNNFESIKIALASPEKIRQWSRGEVKKPETINYRTLKPEKD
GLFCERIFGPQKDWECHCGKYRRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPMS
HIWYFKGIPSRMGLLLDMSPRSLEKILYFASYVVVDPGETGLNEKQLLTEKEYRTALE
KYGYTFTVGMGAEAVKTLLQNIDLEQQSKDLRAELKDSTGQKKVRTIRRLEVVEAFKK
SGNKPEWMILDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGA
PDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPELKFYQCGLPKKMALELFKPFVMDKLVKEGYAHNIKSAKSIVEK
VKPEVWDVLEDVIKSHPVLLNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAYNADF
DGDQMAVHVPLSVEAQAEARFLMLSVNNILAPKDGSPITTPSQDMVLGCYYLTIEAQD
GAKGTGMVFKDFNELLLAYYNKSVHLHALVKLKVTLEDGRSSLVESTVGRFIFNENIP
QDLGFVDRKENPFALEVDFLADKKSLGKIIDKCFRKHGNTETAELLDYIKALGFKYST
LGGITVAVDDMSVPEEKKVFIAEAEAKVDKYEKAYRRGLISDEERYEKVIETWTETTD
KVTDALMGGLDRLNNIYIMAHSGARGSKNQIRQLAGMRGLMANASGKTVEIPVKSNFR
EGLSVLEYFTSSHGARKGLADTAIRTAESGYLTRRLVDVSQDVIVREIDCGTEDTTEI
YAIKEGNEVIEEIYDRIVGRYTIDPILNPETGEVLVEADSMIQEDEAETIVALGIEKI
RIRTVLNCKTNHGVCSKCYGRNLATGKEVNIGEAVGIIAAQSIGEPGTQLTMRTFHTG
GVAGADITQGLPRVEELFEARKPKGLAVITEVSGRVEIDETGKRKEVNVIPEEGETQT
YVIPYGSRLKVKQGQMLEAGDPLTQGFINPHDIVRVNGVKGVQEYIVKEVQRVYRLQG
VDVNDKHIEVIVRQMLSKVKVEDPGDTDLLPGGYEDVLTFNECNKDAIDKGLRPAVAK
RVLLGITKASLATDSFLSAASFQETTRVLTEAAIKGKEDHLIGLKENVILGKLIPAGT
GMKKYRNIAVEKIED"
misc_feature 97765..101247
/gene="rpoC"
/locus_tag="CD196_0073"
/note="DNA-directed RNA polymerase subunit beta';
Provisional; Region: PRK00566"
/db_xref="CDD:179068"
misc_feature 97774..98757
/gene="rpoC"
/locus_tag="CD196_0073"
/note="RNA polymerase Rpb1, domain 1; Region:
RNA_pol_Rpb1_1; pfam04997"
/db_xref="CDD:147265"
misc_feature 98434..99264
/gene="rpoC"
/locus_tag="CD196_0073"
/note="RNA polymerase I subunit A N-terminus; Region:
RPOLA_N; smart00663"
/db_xref="CDD:197824"
misc_feature 99196..99669
/gene="rpoC"
/locus_tag="CD196_0073"
/note="RNA polymerase Rpb1, domain 3; Region:
RNA_pol_Rpb1_3; pfam04983"
/db_xref="CDD:147253"
misc_feature 99754..99984
/gene="rpoC"
/locus_tag="CD196_0073"
/note="RNA polymerase Rpb1, domain 4; Region:
RNA_pol_Rpb1_4; pfam05000"
/db_xref="CDD:203147"
misc_feature 100411..>100575
/gene="rpoC"
/locus_tag="CD196_0073"
/note="Largest subunit (beta') of Bacterial DNA-dependent
RNA polymerase (RNAP), C-terminal domain; Region:
RNAP_beta'_C; cd02655"
/db_xref="CDD:132721"
misc_feature order(100411..100413,100420..100425,100429..100431)
/gene="rpoC"
/locus_tag="CD196_0073"
/note="Rpb1 (beta') - Rpb6 (omega) interaction site
[polypeptide binding]; other site"
/db_xref="CDD:132721"
misc_feature 100486..100512
/gene="rpoC"
/locus_tag="CD196_0073"
/note="G-loop; other site"
/db_xref="CDD:132721"
misc_feature 100600..>100770
/gene="rpoC"
/locus_tag="CD196_0073"
/note="Apocytochrome F, C-terminal; Region:
Apocytochr_F_C; cl03168"
/db_xref="CDD:213110"
misc_feature 100735..101208
/gene="rpoC"
/locus_tag="CD196_0073"
/note="Largest subunit (beta') of Bacterial DNA-dependent
RNA polymerase (RNAP), C-terminal domain; Region:
RNAP_beta'_C; cd02655"
/db_xref="CDD:132721"
misc_feature order(101050..101052,101095..101100)
/gene="rpoC"
/locus_tag="CD196_0073"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:132721"
misc_feature order(101140..101142,101158..101160,101176..101178,
101185..101190,101200..101202)
/gene="rpoC"
/locus_tag="CD196_0073"
/note="Rpb1 (beta') - Rpb2 (beta) interaction site
[polypeptide binding]; other site"
/db_xref="CDD:132721"
gene 101539..101961
/gene="rpsL"
/locus_tag="CD196_0074"
/db_xref="GeneID:8466579"
CDS 101539..101961
/gene="rpsL"
/locus_tag="CD196_0074"
/note="interacts with and stabilizes bases of the 16S rRNA
that are involved in tRNA selection in the A site and with
the mRNA backbone; located at the interface of the 30S and
50S subunits, it traverses the body of the 30S subunit
contacting proteins on the other side; mutations in the
S12 gene confer streptomycin resistance"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S12"
/protein_id="YP_003213126.2"
/db_xref="GI:395342380"
/db_xref="GeneID:8466579"
/translation="MPTINQLVRKSRKALEKKSTAPALQKGYNSLNKKVTDASAPQKR
GVCTSVKTVTPKKPNSALRKVARVRLTNGIEVSAYIPGEGHNLQEHSVVLIRGGRVKD
LPGVRYHILRGTLDTAGVDKRRQSRSKYGAKRPKEAKK"
misc_feature 101545..101907
/gene="rpsL"
/locus_tag="CD196_0074"
/note="S12-like family, 30S ribosomal protein S12
subfamily; S12 is located at the interface of the large
and small ribosomal subunits of prokaryotes, chloroplasts
and mitochondria, where it plays an important role in both
tRNA and ribosomal subunit...; Region: Ribosomal_S12;
cd03368"
/db_xref="CDD:48341"
misc_feature order(101548..101553,101557..101562,101569..101574)
/gene="rpsL"
/locus_tag="CD196_0074"
/note="S17 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:48341"
misc_feature 101548..101550
/gene="rpsL"
/locus_tag="CD196_0074"
/note="S8 interaction site; other site"
/db_xref="CDD:48341"
misc_feature order(101572..101580,101614..101616,101659..101664,
101668..101670,101713..101718,101722..101730,
101749..101751,101773..101775,101782..101787,
101824..101829,101839..101844,101905..101907)
/gene="rpsL"
/locus_tag="CD196_0074"
/note="16S rRNA interaction site [nucleotide binding];
other site"
/db_xref="CDD:48341"
misc_feature order(101704..101709,101839..101841)
/gene="rpsL"
/locus_tag="CD196_0074"
/note="streptomycin interaction site [chemical binding];
other site"
/db_xref="CDD:48341"
misc_feature 101707..101712
/gene="rpsL"
/locus_tag="CD196_0074"
/note="23S rRNA interaction site [nucleotide binding];
other site"
/db_xref="CDD:48341"
misc_feature order(101710..101727,101785..101811)
/gene="rpsL"
/locus_tag="CD196_0074"
/note="aminoacyl-tRNA interaction site (A-site)
[nucleotide binding]; other site"
/db_xref="CDD:48341"
gene 102084..102554
/gene="rpsG"
/locus_tag="CD196_0075"
/db_xref="GeneID:8466593"
CDS 102084..102554
/gene="rpsG"
/locus_tag="CD196_0075"
/note="binds directly to 16S rRNA where it nucleates
assembly of the head domain of the 30S subunit"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S7"
/protein_id="YP_003213127.1"
/db_xref="GI:260681842"
/db_xref="GeneID:8466593"
/translation="MPRKGNIPKREVLPDPMYGSKVVTKLINNLMVDGKKGKSQRIVY
DAFAIVAEKTGEEALEVFNKAMDNIMPVLEVKARRVGGANYQVPIEVRPERRQTLGLR
WLVKYTRARGEKGMVEKLAKEIMDAANNTGASVKKKEDTHKMAEANKAFAHYRW"
misc_feature 102084..102551
/gene="rpsG"
/locus_tag="CD196_0075"
/note="30S ribosomal protein S7; Validated; Region:
PRK05302"
/db_xref="CDD:180003"
gene 102603..104669
/gene="fusA"
/locus_tag="CD196_0076"
/db_xref="GeneID:8466588"
CDS 102603..104669
/gene="fusA"
/locus_tag="CD196_0076"
/note="EF-G; promotes GTP-dependent translocation of the
ribosome during translation; many organisms have multiple
copies of this gene"
/codon_start=1
/transl_table=11
/product="elongation factor G"
/protein_id="YP_003213128.1"
/db_xref="GI:260681843"
/db_xref="GeneID:8466588"
/translation="MARKFPLEKTRNIGIMAHIDAGKTTTTERILFYTGQTHKIGETH
EGASQMDWMEQEKERGITITSAATTASWKDHRINIIDTPGHVDFTVEVERSLRVLDGS
VAVFCAKGGVEPQSENVWRQAETYGVPRIAFINKMDILGADFYNVISMMKSRLNSNAV
PMQLPIGKEDSFIGIIDLLKMDAVIYKDDLGVEMEETDIPEDMKELAAEWREKLVESV
AETDEELMMKYLEGEELTIDELKVAIRKATIACEMNPVFCGTAYRNKGVQLVIDAVLD
YLPAPTDIPAIKGILADGEEAERHSSDEEPFSALAFKIMTDPFVGKLAFFRVYSGTLE
SGSYVLNATKNKRERIGRILQMHANTREEITKVYAGDIAAAVGLKDTTTGDTLCDPAN
PIILESMEFPEPVISVAIEPSSKAAQEKMGIALQKLAEEDPTFTVKTDQETGQTIISG
MGELHLEIIVDRLLREFKVEAKVGAPQVAYRETITQPVDVEYKYSKQSGGRGQYGHVK
IRVAPQEPGEGYKFTNKTVGGSVPKEYVGPVDMGIQGAMQSGIVAGYPVVDVAVELYD
GSYHEVDSSEMAFKMAGSMAFKDAMKKGNAVLLEPYFKVEVVTPEDYMGDVMGDLNSR
RGLIQGMEARSGAQVINAFVPLSEMFGYSTDLRSSTQGRATYTMIFDHYEQVPASVAK
KIAEGK"
misc_feature 102603..104660
/gene="fusA"
/locus_tag="CD196_0076"
/note="elongation factor G; Reviewed; Region: PRK00007"
/db_xref="CDD:178789"
misc_feature 102636..103445
/gene="fusA"
/locus_tag="CD196_0076"
/note="Elongation factor G (EF-G) family involved in both
the elongation and ribosome recycling phases of protein
synthesis; Region: EF-G; cd01886"
/db_xref="CDD:206673"
misc_feature 102651..102674
/gene="fusA"
/locus_tag="CD196_0076"
/note="G1 box; other site"
/db_xref="CDD:206673"
misc_feature order(102654..102656,102660..102662,102672..102677,
102684..102686,102693..102698,102798..102803,
102855..102860,102927..102932,103038..103040,
103050..103052)
/gene="fusA"
/locus_tag="CD196_0076"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206673"
misc_feature order(102660..102662,102666..102677,103005..103010,
103014..103016,103380..103388)
/gene="fusA"
/locus_tag="CD196_0076"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206673"
misc_feature 102741..102800
/gene="fusA"
/locus_tag="CD196_0076"
/note="Switch I region; other site"
/db_xref="CDD:206673"
misc_feature 102786..102788
/gene="fusA"
/locus_tag="CD196_0076"
/note="G2 box; other site"
/db_xref="CDD:206673"
misc_feature 102843..102854
/gene="fusA"
/locus_tag="CD196_0076"
/note="G3 box; other site"
/db_xref="CDD:206673"
misc_feature 102849..102905
/gene="fusA"
/locus_tag="CD196_0076"
/note="Switch II region; other site"
/db_xref="CDD:206673"
misc_feature 103005..103016
/gene="fusA"
/locus_tag="CD196_0076"
/note="G4 box; other site"
/db_xref="CDD:206673"
misc_feature 103380..103388
/gene="fusA"
/locus_tag="CD196_0076"
/note="G5 box; other site"
/db_xref="CDD:206673"
misc_feature 103521..103769
/gene="fusA"
/locus_tag="CD196_0076"
/note="EFG_mtEFG_II: this subfamily represents the domain
II of elongation factor G (EF-G) in bacteria and, the
C-terminus of mitochondrial Elongation factor G1 (mtEFG1)
and G2 (mtEFG2)_like proteins found in eukaryotes. During
the process of peptide synthesis...; Region: EFG_mtEFG_II;
cd04088"
/db_xref="CDD:58095"
misc_feature 104040..104387
/gene="fusA"
/locus_tag="CD196_0076"
/note="EFG_mtEFG1_IV: domains similar to domain IV of the
bacterial translational elongation factor (EF) EF-G.
Included in this group is a domain of mitochondrial
Elongation factor G1 (mtEFG1) proteins homologous to
domain IV of EF-G. Eukaryotic cells harbor 2...; Region:
EFG_mtEFG1_IV; cd01434"
/db_xref="CDD:58274"
misc_feature 104400..104633
/gene="fusA"
/locus_tag="CD196_0076"
/note="EFG_mtEFG_C: domains similar to the C-terminal
domain of the bacterial translational elongation factor
(EF) EF-G. Included in this group is the C-terminus of
mitochondrial Elongation factor G1 (mtEFG1) and G2
(mtEFG2) proteins. Eukaryotic cells harbor 2...; Region:
EFG_mtEFG_C; cd03713"
/db_xref="CDD:58065"
gene 104760..105953
/gene="tufB"
/locus_tag="CD196_0077"
/db_xref="GeneID:8466137"
CDS 104760..105953
/gene="tufB"
/locus_tag="CD196_0077"
/note="EF-Tu; promotes GTP-dependent binding of
aminoacyl-tRNA to the A-site of ribosomes during protein
biosynthesis; when the tRNA anticodon matches the mRNA
codon, GTP hydrolysis results; the inactive EF-Tu-GDP
leaves the ribosome and release of GDP is promoted by
elongation factor Ts; many prokaryotes have two copies of
the gene encoding EF-Tu"
/codon_start=1
/transl_table=11
/product="elongation factor Tu"
/protein_id="YP_003213129.1"
/db_xref="GI:260681844"
/db_xref="GeneID:8466137"
/translation="MAKAKYERTKPHVNIGTIGHVDHGKTTLTAAITKTLYDRYQLGE
AVDFANIDKAPEERERGITISTAHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDG
AILVCSATDGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLT
EYDFPGDDTPIVRGSALMALEDPKSEWGDKIVELFEQIDEYIPAPERDTDKPFLMPVE
DVFSITGRGTVATGRVERGVLKVQDEVELVGLTEAPRKVVVTGVEMFRKLLDQAQAGD
NIGALLRGVQRNEIERGQVLAKTGSVKAHTKFTAEVYVLKKEEGGRHTPFFDGYRPQF
YFRTTDVTGACKLPEGIEMVMPGDNVTMEVDLINSIVVEEGLRFSIREGGRTVASGVV
ATIIE"
misc_feature 104760..105950
/gene="tufB"
/locus_tag="CD196_0077"
/note="elongation factor Tu; Reviewed; Region: PRK00049"
/db_xref="CDD:178823"
misc_feature 104790..105374
/gene="tufB"
/locus_tag="CD196_0077"
/note="Elongation Factor Tu (EF-Tu) GTP-binding proteins;
Region: EF_Tu; cd01884"
/db_xref="CDD:206671"
misc_feature 104814..104837
/gene="tufB"
/locus_tag="CD196_0077"
/note="G1 box; other site"
/db_xref="CDD:206671"
misc_feature order(104817..104819,104823..104825,104835..104840,
104847..104849,104856..104861,104871..104873,
104958..104963,105015..105020,105087..105092,
105096..105107,105114..105116,105207..105209,
105219..105221,105297..105302)
/gene="tufB"
/locus_tag="CD196_0077"
/note="GEF interaction site [polypeptide binding]; other
site"
/db_xref="CDD:206671"
misc_feature order(104823..104840,104901..104903,105168..105173,
105177..105179,105282..105290)
/gene="tufB"
/locus_tag="CD196_0077"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206671"
misc_feature 104928..104960
/gene="tufB"
/locus_tag="CD196_0077"
/note="Switch I region; other site"
/db_xref="CDD:206671"
misc_feature 104946..104948
/gene="tufB"
/locus_tag="CD196_0077"
/note="G2 box; other site"
/db_xref="CDD:206671"
misc_feature 105003..105014
/gene="tufB"
/locus_tag="CD196_0077"
/note="G3 box; other site"
/db_xref="CDD:206671"
misc_feature 105009..105065
/gene="tufB"
/locus_tag="CD196_0077"
/note="Switch II region; other site"
/db_xref="CDD:206671"
misc_feature 105168..105179
/gene="tufB"
/locus_tag="CD196_0077"
/note="G4 box; other site"
/db_xref="CDD:206671"
misc_feature 105282..105290
/gene="tufB"
/locus_tag="CD196_0077"
/note="G5 box; other site"
/db_xref="CDD:206671"
misc_feature 105396..105659
/gene="tufB"
/locus_tag="CD196_0077"
/note="EFTU_II: Elongation factor Tu domain II. Elongation
factors Tu (EF-Tu) are three-domain GTPases with an
essential function in the elongation phase of mRNA
translation. The GTPase center of EF-Tu is in the
N-terminal domain (domain I), also known as the...;
Region: EFTU_II; cd03697"
/db_xref="CDD:58088"
misc_feature 105666..105935
/gene="tufB"
/locus_tag="CD196_0077"
/note="Domain III of elongation factor (EF) Tu. Ef-Tu
consists of three structural domains, designated I, II and
III. Domain III adopts a beta barrel structure. Domain III
is involved in binding to both charged tRNA and binding to
elongation factor Ts (EF-Ts); Region: EFTU_III; cd03707"
/db_xref="CDD:58073"
misc_feature order(105702..105704,105708..105716,105768..105770,
105888..105896,105924..105926)
/gene="tufB"
/locus_tag="CD196_0077"
/note="Antibiotic Binding Site [chemical binding]; other
site"
/db_xref="CDD:58073"
gene 106326..106637
/gene="rpsJ"
/locus_tag="CD196_0078"
/db_xref="GeneID:8466762"
CDS 106326..106637
/gene="rpsJ"
/locus_tag="CD196_0078"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S10"
/protein_id="YP_003213130.1"
/db_xref="GI:260681845"
/db_xref="GeneID:8466762"
/translation="MAKNEKIRIRLKSYDHKLLDFSAGKIVETAKKAGSQVSGPVPLP
TEKQVVTILRAVHKYKDSREQFEIRTHKRLIDIANPTPKTVDSLMRLDLPAGVDIEIK
L"
misc_feature 106332..106634
/gene="rpsJ"
/locus_tag="CD196_0078"
/note="30S ribosomal protein S10; Reviewed; Region: rpsJ;
PRK00596"
/db_xref="CDD:179076"
gene 106729..107358
/gene="rplC"
/locus_tag="CD196_0079"
/db_xref="GeneID:8466591"
CDS 106729..107358
/gene="rplC"
/locus_tag="CD196_0079"
/note="binds directly near the 3' end of the 23S rRNA,
where it nucleates assembly of the 50S subunit; essential
for peptidyltransferase activity; mutations in this gene
confer resistance to tiamulin"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L3"
/protein_id="YP_003213131.1"
/db_xref="GI:260681846"
/db_xref="GeneID:8466591"
/translation="MKGILGKKVGMTQIFTDKGVVIPVTAVEAGPMVVTQIKTVDKDG
YNAIQIGFEDAKEKALNKPKKGHLAAANVLKKHLKEFRVDSVEGYTVGQEIKADVFEA
GAKIDVTGISKGKGFQGPIKRHGQSRGPETHGSRYHRRPGSMGACSYPGRVFKNKKLA
GHMGSVKVTVQNLEVVKVDADKNLILVKGAIPGAKGSVVTIKEAIKVSK"
misc_feature 106729..107355
/gene="rplC"
/locus_tag="CD196_0079"
/note="50S ribosomal protein L3; Validated; Region: rplC;
PRK00001"
/db_xref="CDD:178784"
gene 107358..108011
/gene="rplD"
/locus_tag="CD196_0080"
/db_xref="GeneID:8466549"
CDS 107358..108011
/gene="rplD"
/locus_tag="CD196_0080"
/note="L4 is important during the early stages of 50S
assembly; it initially binds near the 5' end of the 23S
rRNA"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L4"
/protein_id="YP_003213132.1"
/db_xref="GI:260681847"
/db_xref="GeneID:8466549"
/translation="MTNLEKGGITMPKLNVLNVSGQNVGEIELSDSIFGVEVNGHVLY
EVVKNQLANKRQGTQSAKTRAEVRGGGRKPWKQKGTGRARQGSTRSVQWVGGGVAFAP
KPRSYKYTLPKKVRRLAMKSALSSKVQNSEVIVLDALNMDAPKTKEFAQILNNINAAK
KALVVIADKNDNVIKSARNIEGVQTALVNTMNVYDILKYDSFIITTDAVKKVEEVYA"
misc_feature 107391..108008
/gene="rplD"
/locus_tag="CD196_0080"
/note="50S ribosomal protein L4; Provisional; Region:
rplD; PRK05319"
/db_xref="CDD:180011"
gene 108011..108301
/gene="rplW"
/locus_tag="CD196_0081"
/db_xref="GeneID:8466550"
CDS 108011..108301
/gene="rplW"
/locus_tag="CD196_0081"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L23"
/protein_id="YP_003213133.1"
/db_xref="GI:260681848"
/db_xref="GeneID:8466550"
/translation="MTNPHDVIIRPVVTEHSMAEMGEKKYTFVVAKDANKTEIKKAVE
KVFGVSVDKVNTLNYDGKVKRMGRTQGRTASFKKAVVKLTADSKEIEFFQGM"
misc_feature 108023..108298
/gene="rplW"
/locus_tag="CD196_0081"
/note="50S ribosomal protein L23; Reviewed; Region: rplW;
PRK05738"
/db_xref="CDD:180228"
gene 108331..109161
/gene="rplB"
/locus_tag="CD196_0082"
/db_xref="GeneID:8466566"
CDS 108331..109161
/gene="rplB"
/locus_tag="CD196_0082"
/note="one of the primary rRNA-binding proteins; required
for association of the 30S and 50S subunits to form the
70S ribosome, for tRNA binding and peptide bond formation"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L2"
/protein_id="YP_003213134.1"
/db_xref="GI:260681849"
/db_xref="GeneID:8466566"
/translation="MAIKKFRPTSPALRQMTVLVSDEITCNQPEKSLLVNLKKNAGRN
VHGRITVRHRGGGQKRKYRIIDFKRDKDGIPAKVATIEYDPNRTANIALLNYADGEKR
YILAPVGINVGDTILSGLGADIKPGNCLALKDMPVGTIIHNIELKPGKGAQLVRSAGV
SAQLMAKEGKNALLRLPSGEMRLVSINCKATIGQVGNIEHGNVVIGKAGRKRHMGIRP
TVRGSVMNPNDHPHGGGEGRSPIGRPSPVTPWGKPALGYKTRKKNKASNKLIVSRRTK
"
misc_feature 108331..109158
/gene="rplB"
/locus_tag="CD196_0082"
/note="50S ribosomal protein L2; Validated; Region: rplB;
PRK09374"
/db_xref="CDD:181807"
misc_feature 108454..108684
/gene="rplB"
/locus_tag="CD196_0082"
/note="Ribosomal Proteins L2, RNA binding domain; Region:
Ribosomal_L2; pfam00181"
/db_xref="CDD:109247"
misc_feature 108700..109089
/gene="rplB"
/locus_tag="CD196_0082"
/note="Ribosomal Proteins L2, C-terminal domain; Region:
Ribosomal_L2_C; pfam03947"
/db_xref="CDD:202823"
gene 109196..109477
/gene="rpsS"
/locus_tag="CD196_0083"
/db_xref="GeneID:8466548"
CDS 109196..109477
/gene="rpsS"
/locus_tag="CD196_0083"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S19"
/protein_id="YP_003213135.1"
/db_xref="GI:260681850"
/db_xref="GeneID:8466548"
/translation="MSRSTKKGPFVHARLLKKIEAMNASGNKEVIKTWSRSSTVFPQM
VENTIAVHDGRKHVPVYITEDMVGHKLGEFVPTRTFKGHKDDEKSNKRK"
misc_feature 109196..109471
/gene="rpsS"
/locus_tag="CD196_0083"
/note="30S ribosomal protein S19; Reviewed; Region: rpsS;
PRK00357"
/db_xref="CDD:178985"
gene 109509..109844
/gene="rplV"
/locus_tag="CD196_0084"
/db_xref="GeneID:8466600"
CDS 109509..109844
/gene="rplV"
/locus_tag="CD196_0084"
/note="binds specifically to 23S rRNA during the early
stages of 50S assembly; makes contact with all 6 domains
of the 23S rRNA in the assembled 50S subunit and ribosome;
mutations in this gene result in erythromycin resistance;
located near peptidyl-transferase center"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L22"
/protein_id="YP_003213136.1"
/db_xref="GI:260681851"
/db_xref="GeneID:8466600"
/translation="MEAKATAKYVRVSPRKAGQICDLVRGKNVDEALAILKFTPRGAA
SIIAKVVKSAKANAENNHEMDTEKLYIASIVANQGPTMKRFMPRAMGRATTIRKRTSH
IEVVVKEKK"
misc_feature 109515..109829
/gene="rplV"
/locus_tag="CD196_0084"
/note="Ribosomal protein L22/L17e. L22 (L17 in
eukaryotes) is a core protein of the large ribosomal
subunit. It is the only ribosomal protein that interacts
with all six domains of 23S rRNA, and is one of the
proteins important for directing the proper...; Region:
Ribosomal_L22; cd00336"
/db_xref="CDD:48343"
misc_feature order(109515..109520,109584..109592,109596..109601,
109605..109610,109671..109688,109713..109730,
109824..109829)
/gene="rplV"
/locus_tag="CD196_0084"
/note="putative translocon binding site; other site"
/db_xref="CDD:48343"
misc_feature order(109524..109526,109530..109532,109539..109541,
109545..109553,109560..109562,109572..109574,
109581..109583,109665..109667,109677..109679,
109686..109688,109725..109727,109731..109739,
109743..109745,109752..109754,109788..109805)
/gene="rplV"
/locus_tag="CD196_0084"
/note="protein-rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:48343"
gene 109867..110682
/gene="rpsC"
/locus_tag="CD196_0085"
/db_xref="GeneID:8466565"
CDS 109867..110682
/gene="rpsC"
/locus_tag="CD196_0085"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S3"
/protein_id="YP_003213137.1"
/db_xref="GI:260681852"
/db_xref="GeneID:8466565"
/translation="MGQKVNPHGLRVGVIKDWDSRWFATDKKEFGNLLLEDHNIRKFL
KKRLYSAGVAKIEIERSANKIKMDLHVAKPGVVIGRAGAGIEALKAELEKMTKKTIIV
NIVEVRSTDKNAQLVAENIALAIERRVAFRRAMKQAIQRAMKSGAKGIKVSASGRLGG
AEMARTEGYSEGNVPLQTLRADIDYGFAEADTTYGKIGIKVWICNGEVLPTRDGVNPR
EESRKSDRRDNKRDNRRNDRRGNDRRGNDNRGNYRGQRPQGGSRPQRTENKGN"
misc_feature 109867..110535
/gene="rpsC"
/locus_tag="CD196_0085"
/note="30S ribosomal protein S3; Reviewed; Region: rpsC;
PRK00310"
/db_xref="CDD:178972"
misc_feature 109870..110190
/gene="rpsC"
/locus_tag="CD196_0085"
/note="K homology RNA-binding (KH) domain of the
prokaryotic 30S small ribosomal subunit protein S3. S3 is
part of the head region of the 30S ribosomal subunit and
is believed to interact with mRNA as it threads its way
from the latch into the channel. The KH...; Region:
30S_S3_KH; cd02412"
/db_xref="CDD:48410"
misc_feature 110101..110112
/gene="rpsC"
/locus_tag="CD196_0085"
/note="G-X-X-G motif; other site"
/db_xref="CDD:48410"
misc_feature 110224..110475
/gene="rpsC"
/locus_tag="CD196_0085"
/note="Ribosomal protein S3, C-terminal domain; Region:
Ribosomal_S3_C; pfam00189"
/db_xref="CDD:201068"
gene 110718..111149
/gene="rplP"
/locus_tag="CD196_0086"
/db_xref="GeneID:8466584"
CDS 110718..111149
/gene="rplP"
/locus_tag="CD196_0086"
/note="located in the peptidyl transferase center and may
be involved in peptidyl transferase activity; similar to
archaeal L10e"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L16"
/protein_id="YP_003213138.1"
/db_xref="GI:260681853"
/db_xref="GeneID:8466584"
/translation="MLMPKRVKRRRVHRGSMAGQAHKGNKVTYGEFGLVALEASWITS
NQIEAARIAMTRYIKRGGKVWIKIFPHKPVTRKPAETRMGAGKGSPEYWVAVVKPGRV
MFELAGVSEDKAREAMRLAAHKLPIKCKFVKKEDLEVKGGE"
misc_feature 110784..111113
/gene="rplP"
/locus_tag="CD196_0086"
/note="Ribosomal_L16_L10e: L16 is an essential protein in
the large ribosomal subunit of bacteria, mitochondria, and
chloroplasts. Large subunits that lack L16 are defective
in peptidyl transferase activity, peptidyl-tRNA hydrolysis
activity, association with...; Region: Ribosomal_L16_L10e;
cd01433"
/db_xref="CDD:88606"
misc_feature order(110784..110786,110790..110795,110802..110804,
110850..110855,110862..110864,110871..110873,
110883..110885,110892..110894,110910..110918,
110922..110924,110928..110930,110940..110945,
110964..110978,111018..111020,111072..111077,
111084..111089)
/gene="rplP"
/locus_tag="CD196_0086"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88606"
misc_feature 110829..110834
/gene="rplP"
/locus_tag="CD196_0086"
/note="5S rRNA interface [nucleotide binding]; other site"
/db_xref="CDD:88606"
misc_feature order(110865..110873,110880..110885)
/gene="rplP"
/locus_tag="CD196_0086"
/note="putative antibiotic binding site [chemical
binding]; other site"
/db_xref="CDD:88606"
misc_feature order(110892..110894,110901..110906,110910..110912,
111036..111038)
/gene="rplP"
/locus_tag="CD196_0086"
/note="L25 interface [polypeptide binding]; other site"
/db_xref="CDD:88606"
misc_feature order(110958..110963,110970..110975)
/gene="rplP"
/locus_tag="CD196_0086"
/note="L27 interface [polypeptide binding]; other site"
/db_xref="CDD:88606"
gene 111151..111354
/gene="rpmC"
/locus_tag="CD196_0087"
/db_xref="GeneID:8466559"
CDS 111151..111354
/gene="rpmC"
/locus_tag="CD196_0087"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L29"
/protein_id="YP_003213139.1"
/db_xref="GI:260681854"
/db_xref="GeneID:8466559"
/translation="MKAKELRDLTSEELMNKLNDFKSELFSLRFQLATGQLENTARIK
FVKKDIAKVKTVLAERKLYETRA"
misc_feature 111160..111330
/gene="rpmC"
/locus_tag="CD196_0087"
/note="Ribosomal L29 protein/HIP. L29 is a protein of the
large ribosomal Subunit. A homolog, called heparin/heparan
sulfate interacting protein (HIP), has also been
identified in mammals. L29 is located on the surface of
the large ribosomal subunit, where it...; Region:
Ribosomal_L29_HIP; cd00427"
/db_xref="CDD:88602"
misc_feature order(111160..111162,111169..111171,111271..111273,
111301..111306,111310..111315,111325..111327)
/gene="rpmC"
/locus_tag="CD196_0087"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88602"
misc_feature order(111160..111168,111172..111174,111184..111189,
111193..111198,111205..111210,111217..111222,
111229..111231,111238..111243,111265..111267,
111274..111276,111286..111288,111295..111300,
111307..111312,111319..111321)
/gene="rpmC"
/locus_tag="CD196_0087"
/note="putative translocon interaction site; other site"
/db_xref="CDD:88602"
misc_feature order(111208..111210,111220..111222,111229..111231,
111241..111243,111286..111288)
/gene="rpmC"
/locus_tag="CD196_0087"
/note="signal recognition particle (SRP54) interaction
site; other site"
/db_xref="CDD:88602"
misc_feature order(111226..111228,111235..111240)
/gene="rpmC"
/locus_tag="CD196_0087"
/note="L23 interface [polypeptide binding]; other site"
/db_xref="CDD:88602"
misc_feature 111247..111252
/gene="rpmC"
/locus_tag="CD196_0087"
/note="trigger factor interaction site; other site"
/db_xref="CDD:88602"
gene 111378..111632
/gene="rpsQ"
/locus_tag="CD196_0088"
/db_xref="GeneID:8466570"
CDS 111378..111632
/gene="rpsQ"
/locus_tag="CD196_0088"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S17"
/protein_id="YP_003213140.1"
/db_xref="GI:260681855"
/db_xref="GeneID:8466570"
/translation="MERGRRKVRIGRVVSDKMDKTIVVAVEEFVRHPLYNKRVKRTKK
FKAHDEKNICNIGDRVKIMETRPLSKDKRFRLVEVVEKVK"
misc_feature 111420..111629
/gene="rpsQ"
/locus_tag="CD196_0088"
/note="30S ribosomal protein S17; Reviewed; Region: rpsQ;
PRK05610"
/db_xref="CDD:180162"
gene 111658..112026
/gene="rplN"
/locus_tag="CD196_0089"
/db_xref="GeneID:8466598"
CDS 111658..112026
/gene="rplN"
/locus_tag="CD196_0089"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L14"
/protein_id="YP_003213141.1"
/db_xref="GI:260681856"
/db_xref="GeneID:8466598"
/translation="MIQQESRLRVADNSGAKELLCIRVLGGSKRRYGNIGDVIVATVK
SATPGGVVKKGKVVKAVIVRSKQGVRRNDGSYISFDENAAVIIKDDKTPVGTRIFGPV
ARELRDNEFMKIVSLAPEVL"
misc_feature 111658..112023
/gene="rplN"
/locus_tag="CD196_0089"
/note="50S ribosomal protein L14; Validated; Region: rplN;
PRK05483"
/db_xref="CDD:180117"
gene 112047..112355
/gene="rplX"
/locus_tag="CD196_0090"
/db_xref="GeneID:8466557"
CDS 112047..112355
/gene="rplX"
/locus_tag="CD196_0090"
/note="assembly initiator protein; binds to 5' end of 23S
rRNA and nucleates assembly of the 50S; surrounds
polypeptide exit tunnel"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L24"
/protein_id="YP_003213142.1"
/db_xref="GI:260681857"
/db_xref="GeneID:8466557"
/translation="MMRVKKGDTVVVIAGKDKGKKGSVLKVYPKTSKVLVEGVNVITK
HQKPSAMNQQGGIINKEAPIHISNVMPFDPETGKGVRVRYEVKDGNKVRVSAKSGKEL
"
misc_feature 112047..112352
/gene="rplX"
/locus_tag="CD196_0090"
/note="50S ribosomal protein L24; Reviewed; Region: rplX;
PRK00004"
/db_xref="CDD:178786"
misc_feature 112050..112253
/gene="rplX"
/locus_tag="CD196_0090"
/note="50S ribosomal protein L24; Reviewed; Region: rplX;
PRK12281"
/db_xref="CDD:183399"
gene 112385..112927
/gene="rplE"
/locus_tag="CD196_0091"
/db_xref="GeneID:8466567"
CDS 112385..112927
/gene="rplE"
/locus_tag="CD196_0091"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L5"
/protein_id="YP_003213143.1"
/db_xref="GI:260681858"
/db_xref="GeneID:8466567"
/translation="MASRLQEKYMKEVAPALMEKFGYKNVMEIPKLNKIVINMGIGDA
RENPKGLEKGVEELEMISGQKPVITKARKSVANFKLREGMPIGTKVTLRADKMFYFMD
KLVSVSLPRVRDFRGVNPNAFDGRGNYALGVKEQLIFPEIEYDKIDKVRGMDIIFVTT
AKTDEEARELLKLLGMPFSK"
misc_feature 112391..112924
/gene="rplE"
/locus_tag="CD196_0091"
/note="50S ribosomal protein L5; Validated; Region: rplE;
PRK00010"
/db_xref="CDD:178791"
misc_feature 112457..112627
/gene="rplE"
/locus_tag="CD196_0091"
/note="Ribosomal protein L5; Region: Ribosomal_L5;
pfam00281"
/db_xref="CDD:109342"
misc_feature 112637..112918
/gene="rplE"
/locus_tag="CD196_0091"
/note="ribosomal L5P family C-terminus; Region:
Ribosomal_L5_C; pfam00673"
/db_xref="CDD:201383"
gene 112945..113130
/gene="rpsN"
/locus_tag="CD196_0092"
/db_xref="GeneID:8466551"
CDS 112945..113130
/gene="rpsN"
/locus_tag="CD196_0092"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S14"
/protein_id="YP_003213144.1"
/db_xref="GI:260681859"
/db_xref="GeneID:8466551"
/translation="MARKAMVVKQQRKQKYATREYTRCTICGRPHSVLKKFGICRICF
RELAYKGQIPGVRKASW"
misc_feature 112945..113127
/gene="rpsN"
/locus_tag="CD196_0092"
/note="30S ribosomal protein S14; Reviewed; Region: rpsN;
PRK08061"
/db_xref="CDD:181216"
gene 113163..113561
/gene="rpsH"
/locus_tag="CD196_0093"
/db_xref="GeneID:8466595"
CDS 113163..113561
/gene="rpsH"
/locus_tag="CD196_0093"
/note="binds directly to 16S rRNA central domain where it
helps coordinate assembly of the platform of the 30S
subunit"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S8"
/protein_id="YP_003213145.1"
/db_xref="GI:260681860"
/db_xref="GeneID:8466595"
/translation="MTMTDPIADMLTRIRNANVVKHETVDVPASNMKKELARILLEEG
FIRGYDVIEDGKQGIIRIQLKYGQEGERVITGLKKISKPGMRVYAANHEIPKVLNGLG
ISVISTSKGILTDKQARKENVGGEVICYVW"
misc_feature 113166..113558
/gene="rpsH"
/locus_tag="CD196_0093"
/note="30S ribosomal protein S8; Validated; Region: rpsH;
PRK00136"
/db_xref="CDD:178892"
gene 113592..114134
/gene="rplF"
/locus_tag="CD196_0094"
/db_xref="GeneID:8466589"
CDS 113592..114134
/gene="rplF"
/locus_tag="CD196_0094"
/note="ribosomal protein L6 appears to have arisen as a
result of an ancient gene duplication as based on
structural comparison of the Bacillus stearothermophilus
protein; RNA-binding appears to be in the C-terminal
domain; mutations in the L6 gene confer resistance to
aminoglycoside antibiotics such as gentamicin and these
occur in truncations of the C-terminal domain; it has been
localized to a region between the base of the L7/L12 stalk
and the central protuberance"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L6"
/protein_id="YP_003213146.1"
/db_xref="GI:260681861"
/db_xref="GeneID:8466589"
/translation="MSRIGVKPIIIPAGVEVTIAEGNLVTVKGPKGTLTKQLSAELNI
KKEENTIMVERPTDNKKHRSLHGLTRTLLDNMVVGVNTGFEKKLELKGVGYRAQKQGK
KLVMNLGFSHPVEMEDPEGITVEAPNQTELIVKGIDKQLVGNYAAKIRAWRKPEPYKG
KGIKYVDEVIRRKEGKTGKK"
misc_feature 113592..114128
/gene="rplF"
/locus_tag="CD196_0094"
/note="50S ribosomal protein L6; Validated; Region: rplF;
PRK05498"
/db_xref="CDD:180118"
misc_feature 113622..113831
/gene="rplF"
/locus_tag="CD196_0094"
/note="Ribosomal protein L6; Region: Ribosomal_L6;
pfam00347"
/db_xref="CDD:109407"
misc_feature 113865..114086
/gene="rplF"
/locus_tag="CD196_0094"
/note="Ribosomal protein L6; Region: Ribosomal_L6;
pfam00347"
/db_xref="CDD:109407"
gene 114170..114538
/gene="rplR"
/locus_tag="CD196_0095"
/db_xref="GeneID:8466552"
CDS 114170..114538
/gene="rplR"
/locus_tag="CD196_0095"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L18"
/protein_id="YP_003213147.1"
/db_xref="GI:260681862"
/db_xref="GeneID:8466552"
/translation="MLKKADKNANRLQRHKRVRRKISGTSQRPRLCVFRSANNIYAQI
IDDTKRVTLVAASSLEAEVKSAVNHTGNKEAAKKVGELVAKKAVEKGITEVVFDRGGY
LYHGRIQELAEGAREAGLKF"
misc_feature 114224..114529
/gene="rplR"
/locus_tag="CD196_0095"
/note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal
protein found in the central protuberance (CP) of the
large subunit. L18 binds 5S rRNA and induces a
conformational change that stimulates the binding of L5 to
5S rRNA. Association of 5S rRNA with 23S rRNA...; Region:
Ribosomal_L18_L5e; cd00432"
/db_xref="CDD:88603"
misc_feature order(114227..114229,114233..114238,114242..114244,
114257..114259,114269..114286,114290..114292,
114296..114298,114317..114325,114332..114334,
114455..114457,114488..114490)
/gene="rplR"
/locus_tag="CD196_0095"
/note="5S rRNA interface [nucleotide binding]; other site"
/db_xref="CDD:88603"
misc_feature order(114227..114229,114236..114241)
/gene="rplR"
/locus_tag="CD196_0095"
/note="L27 interface [polypeptide binding]; other site"
/db_xref="CDD:88603"
misc_feature order(114230..114235,114458..114460,114467..114469,
114515..114517)
/gene="rplR"
/locus_tag="CD196_0095"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88603"
misc_feature 114473..114475
/gene="rplR"
/locus_tag="CD196_0095"
/note="L5 interface [polypeptide binding]; other site"
/db_xref="CDD:88603"
gene 114559..115068
/gene="rpsE"
/locus_tag="CD196_0096"
/db_xref="GeneID:8466561"
CDS 114559..115068
/gene="rpsE"
/locus_tag="CD196_0096"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S5"
/protein_id="YP_003213148.1"
/db_xref="GI:260681863"
/db_xref="GeneID:8466561"
/translation="MLRRKPIDAGQLDLQEKVVEVRRVTKVVKGGRNFRFAALVVVGD
ENGHVGIGAGKAMEVPDAIKKAVEDAKKNLIVVPIVGTTIPHEVRGHFGAGNILIMPA
VEGTGVIAGGPARAVLELAGLKDVRAKSLGSNNPRNMVNATIEGLNSLKTVEDIAKLR
GKKVEELLG"
misc_feature 114565..115065
/gene="rpsE"
/locus_tag="CD196_0096"
/note="30S ribosomal protein S5; Validated; Region: rpsE;
PRK00550"
/db_xref="CDD:179061"
misc_feature <114658..114795
/gene="rpsE"
/locus_tag="CD196_0096"
/note="Ribosomal protein S5, N-terminal domain; Region:
Ribosomal_S5; pfam00333"
/db_xref="CDD:144065"
misc_feature 114820..115041
/gene="rpsE"
/locus_tag="CD196_0096"
/note="Ribosomal protein S5, C-terminal domain; Region:
Ribosomal_S5_C; pfam03719"
/db_xref="CDD:190724"
gene 115083..115268
/gene="rpmD"
/locus_tag="CD196_0097"
/db_xref="GeneID:8466586"
CDS 115083..115268
/gene="rpmD"
/locus_tag="CD196_0097"
/note="L30 binds domain II of the 23S rRNA and the 5S
rRNA; similar to eukaryotic protein L7"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L30"
/protein_id="YP_003213149.1"
/db_xref="GI:260681864"
/db_xref="GeneID:8466586"
/translation="MAKLQIKLVRSVIGTTPNQKKNVEALGLRKREQVVVKEDNAQTR
GMINKVSHLLEVTEIAE"
misc_feature 115092..115250
/gene="rpmD"
/locus_tag="CD196_0097"
/note="Ribosomal protein L30, which is found in eukaryotes
and prokaryotes but not in archaea, is one of the smallest
ribosomal proteins with a molecular mass of about 7kDa.
L30 binds the 23SrRNA as well as the 5S rRNA and is one of
five ribosomal proteins that...; Region: Ribosomal_L30;
cd01658"
/db_xref="CDD:100100"
misc_feature order(115110..115115,115119..115124,115128..115136,
115143..115148,115155..115163,115167..115169,
115176..115178,115191..115196,115203..115211,
115215..115220)
/gene="rpmD"
/locus_tag="CD196_0097"
/note="23S rRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:100100"
gene 115301..115744
/gene="rplO"
/locus_tag="CD196_0098"
/db_xref="GeneID:8466571"
CDS 115301..115744
/gene="rplO"
/locus_tag="CD196_0098"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L15"
/protein_id="YP_003213150.1"
/db_xref="GI:260681865"
/db_xref="GeneID:8466571"
/translation="MKLHELKPAEGAVRAKRRLGRGTATGQGKTAGRGQKGQWSRSGG
GVRVGFEGGQMPLARRLPKRGFNNIFKKVYTEVNVEVLNRFENGTEITAELLKSTKTI
SKIGKDGIKILGEGNLEKALTVKAAKFTASAQEKIEKAGGKAELV"
misc_feature 115301..115741
/gene="rplO"
/locus_tag="CD196_0098"
/note="50S ribosomal protein L15; Reviewed; Region: rplO;
PRK05592"
/db_xref="CDD:180155"
gene 115788..117056
/gene="prlA"
/locus_tag="CD196_0099"
/db_xref="GeneID:8466558"
CDS 115788..117056
/gene="prlA"
/locus_tag="CD196_0099"
/codon_start=1
/transl_table=11
/product="preprotein translocase SecY subunit"
/protein_id="YP_003213151.1"
/db_xref="GI:260681866"
/db_xref="GeneID:8466558"
/translation="MLSKLKQAWKIKAVRKKVMYTLMMIVIFRIGTTIPVPGIDTSII
QKMVGGNSLLSLYNMFTGGAFSNFSLFALGISPYITASIIIQLLTVGFESLAELQKSG
EEGKKKINKYTKYTALALAVVQALGITLGIVRSALISNSVFFITTVVITLVSASMLVM
WIGDKITEKGIGNGSSVIIFAGIISRIPTDVIKISQQVKSGEVAPWVIVILAVVILLT
VTGVTFIQEATRKIPVQYAKRVVGRKMYGGQSSHIPMKVNQSGVMPIIFASSLLAFPQ
TIAMFMGPNAQAFVQKYLSMATEQGFWTYRSIEILLIIFFSYFYTTVSFNTEDISKNM
KNNGGFIPGIRPGEPTMDYLNRILTRLTLAGATFLAIIAMVPALTTHYMKVNMSLAGT
SLLIVVGVALELKRQLESNLVMRSYQGFLK"
misc_feature 115788..117050
/gene="prlA"
/locus_tag="CD196_0099"
/note="preprotein translocase subunit SecY; Reviewed;
Region: secY; PRK09204"
/db_xref="CDD:181698"
misc_feature 115992..116999
/gene="prlA"
/locus_tag="CD196_0099"
/note="SecY translocase; Region: SecY; pfam00344"
/db_xref="CDD:201169"
gene 117058..117723
/gene="adk"
/locus_tag="CD196_0100"
/db_xref="GeneID:8466461"
CDS 117058..117723
/gene="adk"
/locus_tag="CD196_0100"
/note="essential enzyme that recycles AMP in active cells;
converts ATP and AMP to two molecules of ADP"
/codon_start=1
/transl_table=11
/product="adenylate kinase"
/protein_id="YP_003213152.1"
/db_xref="GI:260681867"
/db_xref="GeneID:8466461"
/translation="MEMDNMRIILLGPPGAGKGTQAAGIVEKYNIPHISTGDIFRKNI
KEGTELGKKAKEYMDQGLLVPDELTVGLVTDRISQEDCKNGFMLDGFPRNVAQGEHLD
IFLKNAGISLDKVVNIEVDKSILVSRAVGRRICKSCGATYHVEFNPPKVEGVCDVCQG
ELYQRADDNEETVSKRIQVYLDETKPLVDYYSKQGIIADIKGDQAIDKVFEDIVAALG
SGK"
misc_feature 117073..117714
/gene="adk"
/locus_tag="CD196_0100"
/note="adenylate kinase; Reviewed; Region: adk; PRK00279"
/db_xref="CDD:178957"
misc_feature 117076..117684
/gene="adk"
/locus_tag="CD196_0100"
/note="Adenylate kinase (ADK) catalyzes the reversible
phosphoryl transfer from adenosine triphosphates (ATP) to
adenosine monophosphates (AMP) and to yield adenosine
diphosphates (ADP). This enzyme is required for the
biosynthesis of ADP and is essential for...; Region: ADK;
cd01428"
/db_xref="CDD:30189"
misc_feature order(117163..117165,117178..117180,117247..117249,
117322..117327,117331..117336,117346..117348)
/gene="adk"
/locus_tag="CD196_0100"
/note="AMP-binding site [chemical binding]; other site"
/db_xref="CDD:30189"
misc_feature order(117178..117180,117322..117324,117334..117336,
117451..117453,117583..117585,117595..117597)
/gene="adk"
/locus_tag="CD196_0100"
/note="ATP-AMP (Ap5A)-binding site [chemical binding];
other site"
/db_xref="CDD:30189"
gene 117724..118470
/gene="map1"
/locus_tag="CD196_0101"
/db_xref="GeneID:8465826"
CDS 117724..118470
/gene="map1"
/locus_tag="CD196_0101"
/codon_start=1
/transl_table=11
/product="methionine aminopeptidase"
/protein_id="YP_003213153.1"
/db_xref="GI:260681868"
/db_xref="GeneID:8465826"
/translation="MIILKSKKEIELLREAGKIVADTHEVLRKAISPGISTLELDKIA
EENIRKYNAEPSFKGYGGFPGSICASINREVVHGIPGETILQEGDIVSLDIGAYYKGY
HGDSAKTHGVGMISEEDRKLIEVTRESFYEGIKFAKLGYRLSDISHAVQTHVEKHGFS
VVRDLVGHGVGANLHEDPQVPNYGLPGKGPRLREGMVIAIEPMVNAGRYHVKTLSDGW
TTVTIDGKKSAHYEHTIAITEHEPLILTKL"
misc_feature 117751..118464
/gene="map1"
/locus_tag="CD196_0101"
/note="Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also
known as methionyl aminopeptidase and Peptidase M.
Catalyzes release of N-terminal amino acids,
preferentially methionine, from peptides and arylamides;
Region: MetAP1; cd01086"
/db_xref="CDD:29971"
misc_feature order(117952..117954,118003..118005,118036..118038,
118225..118227,118324..118326,118417..118419)
/gene="map1"
/locus_tag="CD196_0101"
/note="active site"
/db_xref="CDD:29971"
gene 118483..118761
/locus_tag="CD196_0102"
/db_xref="GeneID:8466307"
CDS 118483..118761
/locus_tag="CD196_0102"
/codon_start=1
/transl_table=11
/product="ribosomal protein"
/protein_id="YP_003213154.1"
/db_xref="GI:260681869"
/db_xref="GeneID:8466307"
/translation="MKKVLSDNLSIGQVVKVSLGRDKGNLFFVVKIINNEYVLIADGK
KRKLDKPKLKKVKHLKKYNFINDEVRKRVVSGQEITDSFLRAELTKLN"
misc_feature 118513..118737
/locus_tag="CD196_0102"
/note="KOW motif of Ribosomal Protein L14; Region:
KOW_RPL14; cd06088"
/db_xref="CDD:240512"
misc_feature order(118528..118530,118534..118539,118573..118575,
118585..118587,118591..118596,118645..118647,
118651..118656,118660..118662,118690..118692,
118699..118701,118705..118710)
/locus_tag="CD196_0102"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:240512"
gene 118799..119017
/gene="infA"
/locus_tag="CD196_0103"
/db_xref="GeneID:8463324"
CDS 118799..119017
/gene="infA"
/locus_tag="CD196_0103"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-1"
/protein_id="YP_003213155.1"
/db_xref="GI:260681870"
/db_xref="GeneID:8463324"
/translation="MAKKDVIELEGTVSEALPNAMFKVKLENGHEILCHISGKLRMNF
IRILEGDKVNVELSPYDLTRGRITWRKK"
misc_feature 118817..119008
/gene="infA"
/locus_tag="CD196_0103"
/note="S1_IF1: Translation Initiation Factor IF1, S1-like
RNA-binding domain. IF1 contains an S1-like RNA-binding
domain, which is found in a wide variety of RNA-associated
proteins. Translation initiation includes a number of
interrelated steps preceding the...; Region: S1_IF1;
cd04451"
/db_xref="CDD:88417"
misc_feature order(118841..118849,118865..118867,118901..118903,
118910..118915,118928..118939,118988..118990,
118994..118996)
/gene="infA"
/locus_tag="CD196_0103"
/note="rRNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88417"
misc_feature order(118901..118903,118913..118915,119006..119008)
/gene="infA"
/locus_tag="CD196_0103"
/note="predicted 30S ribosome binding site; other site"
/db_xref="CDD:88417"
gene 119053..119166
/gene="rpmJ"
/locus_tag="CD196_0104"
/db_xref="GeneID:8466254"
CDS 119053..119166
/gene="rpmJ"
/locus_tag="CD196_0104"
/note="smallest protein in the large subunit; similar to
what is found with protein L31 and L33 several bacterial
genomes contain paralogs which may be regulated by zinc;
the protein from Thermus thermophilus has a zinc-binding
motif and contains a bound zinc ion; the proteins in this
group have the motif"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L36"
/protein_id="YP_003213156.1"
/db_xref="GI:260681871"
/db_xref="GeneID:8466254"
/translation="MKVRPSVKPICEKCKVIKRKGKVMVICENPKHKQKQG"
misc_feature 119053..119163
/gene="rpmJ"
/locus_tag="CD196_0104"
/note="50S ribosomal protein L36; Reviewed; Region: rpmJ;
PRK00465"
/db_xref="CDD:179039"
gene 119319..119690
/gene="rpsM"
/locus_tag="CD196_0105"
/db_xref="GeneID:8466576"
CDS 119319..119690
/gene="rpsM"
/locus_tag="CD196_0105"
/note="located at the top of the head of the 30S subunit,
it contacts several helices of the 16S rRNA; makes contact
with the large subunit via RNA-protein interactions and
via protein-protein interactions with L5; contacts P-site
tRNA"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S13"
/protein_id="YP_003213157.1"
/db_xref="GI:260681872"
/db_xref="GeneID:8466576"
/translation="MARIAGVDLPREKRAEIGLTYIYGIGKATANEILAKAEINPDTR
IKDLSEDQVNELRKVIDDDFLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQR
TKTNARTRKGPRKTVSRKKKK"
misc_feature 119319..119684
/gene="rpsM"
/locus_tag="CD196_0105"
/note="30S ribosomal protein S13; Validated; Region: rpsM;
PRK05179"
/db_xref="CDD:179955"
misc_feature 119325..119663
/gene="rpsM"
/locus_tag="CD196_0105"
/note="Ribosomal protein S13/S18; Region: Ribosomal_S13;
cl00331"
/db_xref="CDD:214049"
gene 119726..120124
/gene="rpsK"
/locus_tag="CD196_0106"
/db_xref="GeneID:8466594"
CDS 119726..120124
/gene="rpsK"
/locus_tag="CD196_0106"
/note="located on the platform of the 30S subunit, it
bridges several disparate RNA helices of the 16S rRNA;
forms part of the Shine-Dalgarno cleft in the 70S
ribosome; interacts with S7 and S18 and IF-3"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S11"
/protein_id="YP_003213158.1"
/db_xref="GI:260681873"
/db_xref="GeneID:8466594"
/translation="MAKPKKKVTRIRRRERKNIERGHAHIQSTFNNTIITLTDVHGNA
ISWASSGQLGFKGSRKSTPFASQMAAETAAKAAMEHGLKSVEVFVKGPGSGREAAIRA
LQATGLEVTMIKDVTPIPHNGCRPPKRRRV"
misc_feature 119789..120121
/gene="rpsK"
/locus_tag="CD196_0106"
/note="30S ribosomal protein S11; Validated; Region:
PRK05309"
/db_xref="CDD:180007"
gene 120156..120779
/gene="rpsD"
/locus_tag="CD196_0107"
/db_xref="GeneID:8466592"
CDS 120156..120779
/gene="rpsD"
/locus_tag="CD196_0107"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S4"
/protein_id="YP_003213159.1"
/db_xref="GI:260681874"
/db_xref="GeneID:8466592"
/translation="MARYTGASCRQCRREGMKLFLKGDRCYTDKCAIVKRNYAPGQHG
QGRKKVSNYGLQLREKQKVKRIYGVLETQFRNLYERAENMPGKAGENLLSLLERRLDN
VVYRMGLASSRKEARQLVTHGHFTLNGNKVDIPSLIVKVGDVIEVKEKSRSSAKFKNL
VEVNSRIAPKWLEANVEGMTAKVVGVPTREDIDLEIAEHLIIELYSK"
misc_feature 120156..120776
/gene="rpsD"
/locus_tag="CD196_0107"
/note="30S ribosomal protein S4; Validated; Region: rpsD;
PRK05327"
/db_xref="CDD:180018"
misc_feature 120159..120446
/gene="rpsD"
/locus_tag="CD196_0107"
/note="Ribosomal protein S4/S9 N-terminal domain; Region:
Ribosomal_S4; pfam00163"
/db_xref="CDD:201048"
misc_feature 120447..120629
/gene="rpsD"
/locus_tag="CD196_0107"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:29105"
misc_feature order(120450..120452,120486..120491,120495..120500,
120504..120509,120516..120521,120525..120527,
120546..120569,120573..120575)
/gene="rpsD"
/locus_tag="CD196_0107"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:29105"
gene 120857..121804
/gene="rpoA"
/locus_tag="CD196_0108"
/db_xref="GeneID:8466585"
CDS 120857..121804
/gene="rpoA"
/locus_tag="CD196_0108"
/note="catalyzes the transcription of DNA into RNA using
the four ribonucleoside triphosphates as substrates.
Dimerization of the alpha subunit is the first step in the
sequential assembly of subunits to form the holoenzyme"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit alpha"
/protein_id="YP_003213160.1"
/db_xref="GI:260681875"
/db_xref="GeneID:8466585"
/translation="MIEIEKPKVDIVELSEDYRYGKFVIEPLERGYGITIGNALRRIL
LSSLPGVAVNAIKIDGVLHEFSTIPGVKEDVTEIILTLKELSATIDGEGSRTLKIEAQ
GPCSITGADIICPPDVEILSKDLAIATLDDNAKLNMEIFVDKGRGYVSAEENKTENVP
IGVLPVDSIYTPVEKVSYHVENTRVGQKTDYDKLVLEVWTNGSINPQEGISLAAKVLV
EHLNLFIDLTEHVSSVEIMVEKEEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVEE
LANKSEDDMMKVRNLGKKSLEEVIQKLEELGLGLKPSEE"
misc_feature 120860..121789
/gene="rpoA"
/locus_tag="CD196_0108"
/note="DNA-directed RNA polymerase subunit alpha;
Provisional; Region: PRK05182"
/db_xref="CDD:179956"
misc_feature 120899..121528
/gene="rpoA"
/locus_tag="CD196_0108"
/note="N-terminal domain of the Alpha subunit of Bacterial
RNA polymerase; Region: RNAP_alpha_NTD; cd06928"
/db_xref="CDD:132904"
misc_feature order(120920..120922,120956..120958,120968..120970,
120977..120982,121043..121045,121049..121051,
121055..121057,121061..121072,121085..121087,
121103..121105,121247..121249,121298..121300,
121355..121357,121361..121363,121379..121387,
121391..121402,121430..121432,121439..121441,
121445..121447)
/gene="rpoA"
/locus_tag="CD196_0108"
/note="alphaNTD - beta interaction site [polypeptide
binding]; other site"
/db_xref="CDD:132904"
misc_feature order(120929..120931,120938..120940,120944..120952,
120959..120961,120971..120973,120980..120985,
120995..120997,121496..121498,121505..121510,
121514..121519,121523..121528)
/gene="rpoA"
/locus_tag="CD196_0108"
/note="alphaNTD homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:132904"
misc_feature order(121049..121051,121085..121087,121094..121096,
121103..121108,121295..121300,121304..121306,
121361..121363,121376..121381,121406..121408)
/gene="rpoA"
/locus_tag="CD196_0108"
/note="alphaNTD - beta' interaction site [polypeptide
binding]; other site"
/db_xref="CDD:132904"
misc_feature 121571..121771
/gene="rpoA"
/locus_tag="CD196_0108"
/note="Bacterial RNA polymerase, alpha chain C terminal
domain; Region: RNA_pol_A_CTD; pfam03118"
/db_xref="CDD:202541"
gene 121825..122166
/gene="rplQ"
/locus_tag="CD196_0109"
/db_xref="GeneID:8466577"
CDS 121825..122166
/gene="rplQ"
/locus_tag="CD196_0109"
/note="is a component of the macrolide binding site in the
peptidyl transferase center"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L17"
/protein_id="YP_003213161.1"
/db_xref="GI:260681876"
/db_xref="GeneID:8466577"
/translation="MAKYRKLGRETAHRNLMLRNLVTCLLRSGRIETTVTRAKETRRM
AEKMITLAKRGDLHARRQVLAYVMDETVVNNLFTDLAPKYAERNGGYTRIIKIGPRKG
DAAEMAFIELV"
misc_feature 121825..122163
/gene="rplQ"
/locus_tag="CD196_0109"
/note="50S ribosomal protein L17; Validated; Region: rplQ;
PRK05591"
/db_xref="CDD:180154"
gene 122286..123119
/locus_tag="CD196_0110"
/db_xref="GeneID:8466560"
CDS 122286..123119
/locus_tag="CD196_0110"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_003213162.1"
/db_xref="GI:260681877"
/db_xref="GeneID:8466560"
/translation="MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNG
SGKSTLSKNLNAILMPTEGNILIDDMDTKEEERLWDIRQTAGMVFQNPDNQIVATIVE
EDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQPHLLSGGQKQRVAIAGIIAMR
PKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEADRVVVMEKG
KKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIEEGINISSDILTVDEMVMELCQ
L"
misc_feature 122286..123116
/locus_tag="CD196_0110"
/note="cobalt transporter ATP-binding subunit;
Provisional; Region: PRK13633"
/db_xref="CDD:184193"
misc_feature 122301..122942
/locus_tag="CD196_0110"
/note="First domain of the ATP-binding cassette component
of cobalt transport system; Region:
ABC_cobalt_CbiO_domain1; cd03225"
/db_xref="CDD:213192"
misc_feature 122406..122429
/locus_tag="CD196_0110"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213192"
misc_feature order(122415..122420,122424..122432,122553..122555,
122784..122789,122886..122888)
/locus_tag="CD196_0110"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213192"
misc_feature 122544..122555
/locus_tag="CD196_0110"
/note="Q-loop/lid; other site"
/db_xref="CDD:213192"
misc_feature 122712..122741
/locus_tag="CD196_0110"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213192"
misc_feature 122772..122789
/locus_tag="CD196_0110"
/note="Walker B; other site"
/db_xref="CDD:213192"
misc_feature 122796..122807
/locus_tag="CD196_0110"
/note="D-loop; other site"
/db_xref="CDD:213192"
misc_feature 122874..122894
/locus_tag="CD196_0110"
/note="H-loop/switch region; other site"
/db_xref="CDD:213192"
gene 123152..123973
/gene="cbiO"
/locus_tag="CD196_0111"
/db_xref="GeneID:8463325"
CDS 123152..123973
/gene="cbiO"
/locus_tag="CD196_0111"
/note="with CbiNQ forms the ABC transporter for cobalt
import; Clostridia have two adjacent copies of this gene"
/codon_start=1
/transl_table=11
/product="cobalt transporter ATP-binding subunit"
/protein_id="YP_003213163.1"
/db_xref="GI:260681878"
/db_xref="GeneID:8463325"
/translation="MPFASKALDDISFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKP
SSGEIFINDFNITDKNLNLTEIRKRVGVVFQYPEYQLFEETIDKDIAFGPSNLGLEES
EIHNRVKASMEAVGLDYEGFKDKSPFELSGGQKRRVAIAGVIAMNPEVLILDEPTAGL
DPGGRDEIFNLIKDLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEFMGTPREVF
KSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC"
misc_feature 123152..123970
/gene="cbiO"
/locus_tag="CD196_0111"
/note="cobalt transporter ATP-binding subunit;
Provisional; Region: cbiO; PRK13637"
/db_xref="CDD:184197"
misc_feature 123161..123769
/gene="cbiO"
/locus_tag="CD196_0111"
/note="Domain I of the ABC component of a cobalt transport
family found in bacteria, archaea, and eukaryota. The
transition metal cobalt is an essential component of many
enzymes and must be transported into cells in appropriate
amounts when needed. This ABC...; Region:
ABC_cobalt_CbiO_domain1; cd03225"
/db_xref="CDD:72984"
misc_feature 123224..123247
/gene="cbiO"
/locus_tag="CD196_0111"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72984"
misc_feature order(123233..123238,123242..123250,123374..123376,
123611..123616,123713..123715)
/gene="cbiO"
/locus_tag="CD196_0111"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72984"
misc_feature 123365..123376
/gene="cbiO"
/locus_tag="CD196_0111"
/note="Q-loop/lid; other site"
/db_xref="CDD:72984"
misc_feature 123539..123568
/gene="cbiO"
/locus_tag="CD196_0111"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72984"
misc_feature 123599..123616
/gene="cbiO"
/locus_tag="CD196_0111"
/note="Walker B; other site"
/db_xref="CDD:72984"
misc_feature 123623..123634
/gene="cbiO"
/locus_tag="CD196_0111"
/note="D-loop; other site"
/db_xref="CDD:72984"
misc_feature 123701..123721
/gene="cbiO"
/locus_tag="CD196_0111"
/note="H-loop/switch region; other site"
/db_xref="CDD:72984"
gene 124063..124770
/locus_tag="CD196_0112"
/db_xref="GeneID:8463326"
CDS 124063..124770
/locus_tag="CD196_0112"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_003213164.1"
/db_xref="GI:260681879"
/db_xref="GeneID:8463326"
/translation="MVSIFVVNKFWPYIVVLLCLLAMIKLANIPVKYIVKGVKPLKWI
ILFTFLINIFFLPGDEIWSFGFLAITKQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIE
LTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLDETDKIMKAQMSRGADFESKN
LINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVISRRDYMACV
FQVVYLGAIIATRFIAI"
misc_feature 124063..124674
/locus_tag="CD196_0112"
/note="Cobalt transport protein; Region: CbiQ; pfam02361"
/db_xref="CDD:145484"
gene 124802..125533
/gene="truA1"
/locus_tag="CD196_0113"
/db_xref="GeneID:8463327"
CDS 124802..125533
/gene="truA1"
/locus_tag="CD196_0113"
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine synthase 1"
/protein_id="YP_003213165.1"
/db_xref="GI:260681880"
/db_xref="GeneID:8463327"
/translation="MRNIKIKIQYNGKNYCGWQKQPDSLGIQGTIERAIYDITKEETS
LIGSGRTDSGVHAIGQIANFKINSGISIESIPMALNAKLPKDISVIEACEVNDDFHSR
YSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKMCSEAKSLLGTHDFKGFMSSG
SSVKDTVRTIYDIDISKKDDLITFEISGNGFLYNMVRIIVGTLVDMGRGRINEPFLDI
IQSKTRSRCGHTAPAQGLFLKKVHY"
misc_feature 124802..125530
/gene="truA1"
/locus_tag="CD196_0113"
/note="tRNA pseudouridine synthase A; Validated; Region:
truA; PRK00021"
/db_xref="CDD:178798"
misc_feature 124817..125530
/gene="truA1"
/locus_tag="CD196_0113"
/note="Eukaryotic and bacterial pseudouridine synthases
similar to E. coli TruA; Region: PseudoU_synth_EcTruA;
cd02570"
/db_xref="CDD:211337"
misc_feature order(124826..124828,125039..125041,125048..125071)
/gene="truA1"
/locus_tag="CD196_0113"
/note="dimerization interface 3.5A [polypeptide binding];
other site"
/db_xref="CDD:211337"
misc_feature order(124946..124957,125390..125392)
/gene="truA1"
/locus_tag="CD196_0113"
/note="active site"
/db_xref="CDD:211337"
gene 125653..125994
/locus_tag="CD196_0114"
/db_xref="GeneID:8466752"
CDS 125653..>125991
/locus_tag="CD196_0114"
/note="truncated"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L13"
/protein_id="YP_003213166.1"
/db_xref="GI:260681881"
/db_xref="GeneID:8466752"
/translation="MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTF
TPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVIS
HAVAVCYLKIN"
misc_feature 125695..>125967
/locus_tag="CD196_0114"
/note="Ribosomal protein L13. Protein L13, a large
ribosomal subunit protein, is one of five proteins
required for an early folding intermediate of 23S rRNA in
the assembly of the large subunit. L13 is situated on the
bottom of the large subunit, near the...; Region:
Ribosomal_L13; cd00392"
/db_xref="CDD:88313"
misc_feature order(125722..125724,125728..125733,125740..125742,
125749..125751,125761..125763,125845..125847,
125851..125853,125935..125940,125956..125964)
/locus_tag="CD196_0114"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88313"
misc_feature 125938..125940
/locus_tag="CD196_0114"
/note="L3 interface [polypeptide binding]; other site"
/db_xref="CDD:88313"
gene 126112..126504
/gene="rpsI"
/locus_tag="CD196_0115"
/db_xref="GeneID:8463328"
CDS 126112..126504
/gene="rpsI"
/locus_tag="CD196_0115"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S9"
/protein_id="YP_003213167.1"
/db_xref="GI:260681882"
/db_xref="GeneID:8463328"
/translation="MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETL
IRDVKQPLVLTGNENKYDVIVKVEGGGFTGQAGAIRHGISRALLKADLDLRPALKKEG
FLTRDARMKERKKYGLKAARRAPQFSKR"
misc_feature 126112..126501
/gene="rpsI"
/locus_tag="CD196_0115"
/note="30S ribosomal protein S9; Reviewed; Region: rpsI;
PRK00132"
/db_xref="CDD:178888"
gene 126963..127715
/gene="cwlD"
/locus_tag="CD196_0116"
/db_xref="GeneID:8466590"
CDS 126963..127715
/gene="cwlD"
/locus_tag="CD196_0116"
/codon_start=1
/transl_table=11
/product="germination-specific N-acetylmuramoyl-L-alanine
amidase"
/protein_id="YP_003213168.1"
/db_xref="GI:260681883"
/db_xref="GeneID:8466590"
/translation="MEYYSVFISIHIQGDVVRKYIKHIIFSFAMICLVVVSIFEIKNI
SEDVIKYMPVTNKTIILDAGHGGIDPGALNKDKSTSEKDINLAITLKLRELIESSGGL
VILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNSNANMFVSIHLNAFEQSKYYG
AQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIPSVLIECGF
LSNEKECKLLTDETYQEKIAWAIYIGIQKYLS"
misc_feature 127080..127712
/gene="cwlD"
/locus_tag="CD196_0116"
/note="N-acetylmuramoyl-L-alanine amidase [Cell envelope
biogenesis, outer membrane]; Region: AmiC; COG0860"
/db_xref="CDD:31201"
misc_feature 127134..127700
/gene="cwlD"
/locus_tag="CD196_0116"
/note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA
(also known as peptidoglycan aminohydrolase, NAMLA
amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC
3.5.1.28) is an autolysin that hydrolyzes the amide bond
between N-acetylmuramoyl and L-amino...; Region:
MurNAc-LAA; cd02696"
/db_xref="CDD:119407"
misc_feature order(127155..127157,127203..127205,127407..127409,
127605..127607)
/gene="cwlD"
/locus_tag="CD196_0116"
/note="active site"
/db_xref="CDD:119407"
misc_feature order(127155..127157,127203..127205,127407..127409)
/gene="cwlD"
/locus_tag="CD196_0116"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:119407"
gene 127902..129533
/gene="16SrRNA"
/locus_tag="CD196_r04"
/db_xref="GeneID:8465986"
rRNA 127902..129533
/gene="16SrRNA"
/locus_tag="CD196_r04"
/product="16S ribosomal RNA"
/db_xref="GeneID:8465986"
gene 129786..132737
/gene="23SrRNA"
/locus_tag="CD196_r05"
/db_xref="GeneID:8465770"
rRNA 129786..132737
/gene="23SrRNA"
/locus_tag="CD196_r05"
/product="23S ribosomal RNA"
/db_xref="GeneID:8465770"
gene 132818..132933
/gene="5SrRNA"
/locus_tag="CD196_r06"
/db_xref="GeneID:8465780"
rRNA 132818..132933
/gene="5SrRNA"
/locus_tag="CD196_r06"
/product="5S ribosomal RNA"
/db_xref="GeneID:8465780"
gene 132940..133011
/locus_tag="CD196_t046"
/db_xref="GeneID:8465790"
tRNA 132940..133011
/locus_tag="CD196_t046"
/product="tRNA-Asn"
/anticodon=(pos:132972..132974,aa:Asn,seq:gtt)
/codon_recognized="AAC"
/db_xref="GeneID:8465790"
gene 133019..133090
/locus_tag="CD196_t047"
/db_xref="GeneID:8466843"
tRNA 133019..133090
/locus_tag="CD196_t047"
/product="tRNA-Glu"
/anticodon=(pos:133052..133054,aa:Glu,seq:ttc)
/codon_recognized="GAA"
/db_xref="GeneID:8466843"
gene 133099..133171
/locus_tag="CD196_t048"
/db_xref="GeneID:8466844"
tRNA 133099..133171
/locus_tag="CD196_t048"
/product="tRNA-Val"
/anticodon=(pos:133132..133134,aa:Val,seq:tac)
/codon_recognized="GUA"
/db_xref="GeneID:8466844"
gene 133180..133253
/locus_tag="CD196_t049"
/db_xref="GeneID:8466845"
tRNA 133180..133253
/locus_tag="CD196_t049"
/product="tRNA-Asp"
/anticodon=(pos:133214..133216,aa:Asp,seq:gtc)
/codon_recognized="GAC"
/db_xref="GeneID:8466845"
gene 133267..133338
/locus_tag="CD196_t050"
/db_xref="GeneID:8466846"
tRNA 133267..133338
/locus_tag="CD196_t050"
/product="tRNA-Thr"
/anticodon=(pos:133299..133301,aa:Thr,seq:tgt)
/codon_recognized="ACA"
/db_xref="GeneID:8466846"
gene 133356..133437
/locus_tag="CD196_t051"
/db_xref="GeneID:8466847"
tRNA 133356..133437
/locus_tag="CD196_t051"
/product="tRNA-Tyr"
/anticodon=(pos:133390..133392,aa:Tyr,seq:gta)
/codon_recognized="UAC"
/db_xref="GeneID:8466847"
gene 133450..133520
/locus_tag="CD196_t052"
/db_xref="GeneID:8466848"
tRNA 133450..133520
/locus_tag="CD196_t052"
/product="tRNA-Gly"
/anticodon=(pos:133482..133484,aa:Gly,seq:tcc)
/codon_recognized="GGA"
/db_xref="GeneID:8466848"
gene 133534..133607
/locus_tag="CD196_t053"
/db_xref="GeneID:8466849"
tRNA 133534..133607
/locus_tag="CD196_t053"
/product="tRNA-Arg"
/anticodon=(pos:133568..133570,aa:Arg,seq:tct)
/codon_recognized="AGA"
/db_xref="GeneID:8466849"
gene 133620..133692
/locus_tag="CD196_t054"
/db_xref="GeneID:8466850"
tRNA 133620..133692
/locus_tag="CD196_t054"
/product="tRNA-Gln"
/anticodon=(pos:133653..133655,aa:Gln,seq:ttg)
/codon_recognized="CAA"
/db_xref="GeneID:8466850"
gene 133707..133779
/locus_tag="CD196_t055"
/db_xref="GeneID:8466851"
tRNA 133707..133779
/locus_tag="CD196_t055"
/product="tRNA-Lys"
/anticodon=(pos:133740..133742,aa:Lys,seq:ttt)
/codon_recognized="AAA"
/db_xref="GeneID:8466851"
gene 133785..133870
/locus_tag="CD196_t056"
/db_xref="GeneID:8466852"
tRNA 133785..133870
/locus_tag="CD196_t056"
/product="tRNA-Ser"
/anticodon=(pos:133819..133821,aa:Ser,seq:tga)
/codon_recognized="UCA"
/db_xref="GeneID:8466852"
gene 133891..133978
/locus_tag="CD196_t057"
/db_xref="GeneID:8466853"
tRNA 133891..133978
/locus_tag="CD196_t057"
/product="tRNA-Ser"
/anticodon=(pos:133925..133927,aa:Ser,seq:gct)
/codon_recognized="AGC"
/db_xref="GeneID:8466853"
gene 133990..134063
/locus_tag="CD196_t058"
/db_xref="GeneID:8466854"
tRNA 133990..134063
/locus_tag="CD196_t058"
/product="tRNA-Pro"
/anticodon=(pos:134024..134026,aa:Pro,seq:tgg)
/codon_recognized="CCA"
/db_xref="GeneID:8466854"
gene 134152..134224
/locus_tag="CD196_t059"
/db_xref="GeneID:8466855"
tRNA 134152..134224
/locus_tag="CD196_t059"
/product="tRNA-Trp"
/anticodon=(pos:134185..134187,aa:Trp,seq:cca)
/codon_recognized="UGG"
/db_xref="GeneID:8466855"
gene 134288..134361
/locus_tag="CD196_t060"
/db_xref="GeneID:8466856"
tRNA 134288..134361
/locus_tag="CD196_t060"
/product="tRNA-Pro"
/anticodon=(pos:134322..134324,aa:Pro,seq:tgg)
/codon_recognized="CCA"
/db_xref="GeneID:8466856"
gene 134371..134444
/locus_tag="CD196_t061"
/db_xref="GeneID:8466857"
tRNA 134371..134444
/locus_tag="CD196_t061"
/product="tRNA-Ile"
/anticodon=(pos:134405..134407,aa:Ile,seq:gat)
/codon_recognized="AUC"
/db_xref="GeneID:8466857"
gene 134451..134523
/locus_tag="CD196_t062"
/db_xref="GeneID:8466858"
tRNA 134451..134523
/locus_tag="CD196_t062"
/product="tRNA-Phe"
/anticodon=(pos:134484..134486,aa:Phe,seq:gaa)
/codon_recognized="UUC"
/db_xref="GeneID:8466858"
gene 134534..134607
/locus_tag="CD196_t063"
/db_xref="GeneID:8466859"
tRNA 134534..134607
/locus_tag="CD196_t063"
/product="tRNA-Met"
/anticodon=(pos:134568..134570,aa:Met,seq:cat)
/codon_recognized="AUG"
/db_xref="GeneID:8466859"
gene 134629..136159
/gene="16SrRNA"
/locus_tag="CD196_r07"
/db_xref="GeneID:8466860"
rRNA 134629..136159
/gene="16SrRNA"
/locus_tag="CD196_r07"
/product="16S ribosomal RNA"
/db_xref="GeneID:8466860"
gene 136532..139484
/gene="23SrRNA"
/locus_tag="CD196_r08"
/db_xref="GeneID:8465771"
rRNA 136532..139484
/gene="23SrRNA"
/locus_tag="CD196_r08"
/product="23S ribosomal RNA"
/db_xref="GeneID:8465771"
gene 139557..139673
/gene="5SrRNA"
/locus_tag="CD196_r09"
/db_xref="GeneID:8465781"
rRNA 139557..139673
/gene="5SrRNA"
/locus_tag="CD196_r09"
/product="5S ribosomal RNA"
/db_xref="GeneID:8465781"
gene complement(139887..141071)
/gene="aspC"
/locus_tag="CD196_0117"
/db_xref="GeneID:8465791"
CDS complement(139887..141071)
/gene="aspC"
/locus_tag="CD196_0117"
/codon_start=1
/transl_table=11
/product="aspartate aminotransferase"
/protein_id="YP_003213169.1"
/db_xref="GI:260681884"
/db_xref="GeneID:8465791"
/translation="MLSKRLNFITPSYTIGISSKVKEMESNGVKVINLSIGEPDFNVP
NNAKSYGIDSLNKDYTKYDLVPGLKILREEICKKLIEENNCNYSIDEIVVSSGAKNSI
TNTLLALTDEGDEVLLPKPYWVSYPEMIKLVNAVPVFIDTKKENGFKLTKEELEKSIT
DKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYTGEFTSIAS
LSEEAKDITITINGFSKSAAMTGLRLGYTASNKTIAKAMSSIQGHLISHPSLTAQYIA
YGALKDCSIDIDNMVKTYKSRRDLIKSKLDSIDNVGYVNPNGAFYIFIDLSKVSEKFE
YKDSFSIEFCNQFLEEYNVAVVPGIAFGMDKYIRISYACSENTFLSGLDKLKEFVYKI
MA"
misc_feature complement(139893..141071)
/gene="aspC"
/locus_tag="CD196_0117"
/note="aspartate aminotransferase; Provisional; Region:
PRK05764"
/db_xref="CDD:180244"
misc_feature complement(139911..140978)
/gene="aspC"
/locus_tag="CD196_0117"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature complement(order(140343..140345,140367..140372,
140376..140378,140460..140462,140553..140555,
140703..140705,140775..140783))
/gene="aspC"
/locus_tag="CD196_0117"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature complement(order(140247..140249,140256..140258,
140343..140351,140481..140483,140673..140675,
140772..140774))
/gene="aspC"
/locus_tag="CD196_0117"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature complement(140367..140369)
/gene="aspC"
/locus_tag="CD196_0117"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene 141444..143795
/gene="nrdD"
/locus_tag="CD196_0118"
/db_xref="GeneID:8465865"
CDS 141444..143795
/gene="nrdD"
/locus_tag="CD196_0118"
/note="Catalyzes the reduction of nucleoside
5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates"
/codon_start=1
/transl_table=11
/product="anaerobic ribonucleoside triphosphate reductase"
/protein_id="YP_003213170.1"
/db_xref="GI:260681885"
/db_xref="GeneID:8465865"
/translation="MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLS
EQLTQEVIKFLNHKYSESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNS
KTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEH
SFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAA
IAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNI
VYNTEKETNQKVGLKRDELYLNLEKEKLIQTFDIDDELVNKMQNFAFEESYRETDKKT
YQSMEAFIHNLNTMHSRAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETP
IFPILIFKVKEGINLNPEDPNYDLFKLSCRVSAKRLFPNFSFLDAPFNAKYYKKGEPD
TEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGIKHGIINNEKANLDGFFEE
LDEKINLIIEQLLERFEVQGNKKMKNFPFLMGQGVWKGSDDLVPEDTLKEVIKQGTLT
IGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRHKMDEATDKYKLNFSLMGTPAE
GLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGH
ITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVC
GRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRVKHR"
misc_feature 141444..143792
/gene="nrdD"
/locus_tag="CD196_0118"
/note="anaerobic ribonucleoside triphosphate reductase;
Provisional; Region: PRK07111"
/db_xref="CDD:180846"
misc_feature 141453..141737
/gene="nrdD"
/locus_tag="CD196_0118"
/note="ATP cone domain; Region: ATP-cone; pfam03477"
/db_xref="CDD:202657"
misc_feature 141819..143732
/gene="nrdD"
/locus_tag="CD196_0118"
/note="Class III ribonucleotide reductase; Region:
RNR_III; cd01675"
/db_xref="CDD:153084"
misc_feature order(141951..141953,141957..141962,142053..142067,
142077..142079,142086..142091,142098..142100,
142194..142196,143310..143321,143328..143330)
/gene="nrdD"
/locus_tag="CD196_0118"
/note="effector binding site; other site"
/db_xref="CDD:153084"
misc_feature order(141993..141995,142134..142136,142812..142817,
142878..142880,143304..143306,143313..143315)
/gene="nrdD"
/locus_tag="CD196_0118"
/note="active site"
/db_xref="CDD:153084"
misc_feature order(143610..143612,143619..143621,143652..143654,
143661..143663)
/gene="nrdD"
/locus_tag="CD196_0118"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:153084"
misc_feature 143709..143723
/gene="nrdD"
/locus_tag="CD196_0118"
/note="glycine loop; other site"
/db_xref="CDD:153084"
gene 143817..144356
/gene="nrdG"
/locus_tag="CD196_0119"
/db_xref="GeneID:8466371"
CDS 143817..144356
/gene="nrdG"
/locus_tag="CD196_0119"
/codon_start=1
/transl_table=11
/product="anaerobic ribonucleoside-triphosphate reductase
activating protein"
/protein_id="YP_003213171.1"
/db_xref="GI:260681886"
/db_xref="GeneID:8466371"
/translation="MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDL
CGGFYMDTEEIINKVKSLKLQKGITLSGGEPFLQPEPLEEIAREAKINGLDVWSYTGF
TFEQLLDKKNRAYFKNLNLLKQIDILVDGKFIAEKKDISLKFRGSSNQRIIDVQKSLK
YKKVFLVEQYMKDDLSIAE"
misc_feature 143859..144275
/gene="nrdG"
/locus_tag="CD196_0119"
/note="4Fe-4S single cluster domain; Region: Fer4_12;
pfam13353"
/db_xref="CDD:205533"
misc_feature 143892..>144317
/gene="nrdG"
/locus_tag="CD196_0119"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature order(143901..143903,143907..143909,143913..143915,
143919..143927,144027..144029,144033..144038,
144108..144116,144198..144200)
/gene="nrdG"
/locus_tag="CD196_0119"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene 145044..146668
/gene="16SrRNA"
/locus_tag="CD196_r10"
/db_xref="GeneID:8466374"
rRNA 145044..146668
/gene="16SrRNA"
/locus_tag="CD196_r10"
/product="16S ribosomal RNA"
/db_xref="GeneID:8466374"
gene 146693..146765
/locus_tag="CD196_t064"
/db_xref="GeneID:8465772"
tRNA 146693..146765
/locus_tag="CD196_t064"
/product="tRNA-Ala"
/anticodon=(pos:146726..146728,aa:Ala,seq:tgc)
/codon_recognized="GCA"
/db_xref="GeneID:8465772"
gene 147143..150095
/gene="23SrRNA"
/locus_tag="CD196_r11"
/db_xref="GeneID:8466861"
rRNA 147143..150095
/gene="23SrRNA"
/locus_tag="CD196_r11"
/product="23S ribosomal RNA"
/db_xref="GeneID:8466861"
gene 150168..150284
/gene="5SrRNA"
/locus_tag="CD196_r12"
/db_xref="GeneID:8465782"
rRNA 150168..150284
/gene="5SrRNA"
/locus_tag="CD196_r12"
/product="5S ribosomal RNA"
/db_xref="GeneID:8465782"
gene 150292..150363
/locus_tag="CD196_t065"
/db_xref="GeneID:8465792"
tRNA 150292..150363
/locus_tag="CD196_t065"
/product="tRNA-Asn"
/anticodon=(pos:150324..150326,aa:Asn,seq:gtt)
/codon_recognized="AAC"
/db_xref="GeneID:8465792"
gene 150372..150457
/locus_tag="CD196_t066"
/db_xref="GeneID:8466862"
tRNA 150372..150457
/locus_tag="CD196_t066"
/product="tRNA-Leu"
/anticodon=(pos:150406..150408,aa:Leu,seq:taa)
/codon_recognized="UUA"
/db_xref="GeneID:8466862"
gene 150473..150545
/locus_tag="CD196_t067"
/db_xref="GeneID:8466863"
tRNA 150473..150545
/locus_tag="CD196_t067"
/product="tRNA-Met"
/anticodon=(pos:150506..150508,aa:Met,seq:cat)
/codon_recognized="AUG"
/db_xref="GeneID:8466863"
gene 150556..150627
/locus_tag="CD196_t068"
/db_xref="GeneID:8466864"
tRNA 150556..150627
/locus_tag="CD196_t068"
/product="tRNA-Glu"
/anticodon=(pos:150589..150591,aa:Glu,seq:ttc)
/codon_recognized="GAA"
/db_xref="GeneID:8466864"
gene 150645..150715
/locus_tag="CD196_t069"
/db_xref="GeneID:8466865"
tRNA 150645..150715
/locus_tag="CD196_t069"
/product="tRNA-Gly"
/anticodon=(pos:150677..150679,aa:Gly,seq:tcc)
/codon_recognized="GGA"
/db_xref="GeneID:8466865"
gene 150724..150796
/locus_tag="CD196_t070"
/db_xref="GeneID:8466866"
tRNA 150724..150796
/locus_tag="CD196_t070"
/product="tRNA-Val"
/anticodon=(pos:150757..150759,aa:Val,seq:tac)
/codon_recognized="GUA"
/db_xref="GeneID:8466866"
gene 150805..150878
/locus_tag="CD196_t071"
/db_xref="GeneID:8466867"
tRNA 150805..150878
/locus_tag="CD196_t071"
/product="tRNA-Asp"
/anticodon=(pos:150839..150841,aa:Asp,seq:gtc)
/codon_recognized="GAC"
/db_xref="GeneID:8466867"
gene 150892..150963
/locus_tag="CD196_t072"
/db_xref="GeneID:8466868"
tRNA 150892..150963
/locus_tag="CD196_t072"
/product="tRNA-Gly"
/anticodon=(pos:150924..150926,aa:Gly,seq:gcc)
/codon_recognized="GGC"
/db_xref="GeneID:8466868"
gene 150976..151049
/locus_tag="CD196_t073"
/db_xref="GeneID:8466869"
tRNA 150976..151049
/locus_tag="CD196_t073"
/product="tRNA-Arg"
/anticodon=(pos:151010..151012,aa:Arg,seq:tct)
/codon_recognized="AGA"
/db_xref="GeneID:8466869"
gene 152025..152864
/locus_tag="CD196_0121"
/db_xref="GeneID:8466870"
CDS 152025..152864
/locus_tag="CD196_0121"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213172.1"
/db_xref="GI:260681887"
/db_xref="GeneID:8466870"
/translation="MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTR
AEQVFKGIIFLLLATQLSNTFKLHTVYWISLKALDYGVIAALIIFQPEFRAGLEHIGR
AKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGALIIMERETRISDIINTGTII
DAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDLGTRHRAGI
GVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGG
IFK"
misc_feature 152088..152786
/locus_tag="CD196_0121"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1624"
/db_xref="CDD:31811"
misc_feature 152400..152765
/locus_tag="CD196_0121"
/note="DisA bacterial checkpoint controller
nucleotide-binding; Region: DisA_N; pfam02457"
/db_xref="CDD:190315"
gene 152930..154042
/locus_tag="CD196_0122"
/db_xref="GeneID:8463329"
CDS 152930..154042
/locus_tag="CD196_0122"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213173.1"
/db_xref="GI:260681888"
/db_xref="GeneID:8463329"
/translation="MYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTAD
VYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLE
KNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNETDD
FSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNYK
LSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKL
NDTKQLSAEFLYNAGDIELRNIPTNIDNPNVISDVDIKVVVESTEDLSKLNKKDISLY
IDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE"
misc_feature 152963..153985
/locus_tag="CD196_0122"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4856"
/db_xref="CDD:34465"
misc_feature <153587..153757
/locus_tag="CD196_0122"
/note="YbbR-like protein; Region: YbbR; pfam07949"
/db_xref="CDD:203816"
gene 154039..154158
/locus_tag="CD196_0123"
/db_xref="GeneID:8463330"
CDS 154039..154158
/locus_tag="CD196_0123"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213174.1"
/db_xref="GI:260681889"
/db_xref="GeneID:8463330"
/translation="MNKYFEYLVVTRCDKKTYKIKFVNFMFLLHLVYFSYIIK"
gene 154331..155248
/gene="ptb"
/locus_tag="CD196_0124"
/db_xref="GeneID:8463331"
CDS 154331..155248
/gene="ptb"
/locus_tag="CD196_0124"
/note="catalyzes the synthesis of butanoylphosphate from
butanoyl-CoA and inorganic phosphate"
/codon_start=1
/transl_table=11
/product="phosphate butyryltransferase"
/protein_id="YP_003213175.1"
/db_xref="GI:260681890"
/db_xref="GeneID:8463331"
/translation="MRWKCMRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKE
KIANAILVGDIEKTKEIAKSIDMDIENYELIDIKDLAEASLKSVELVSQGKADMVMKG
LVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRLFFVTDAAMNLAPDTNTKKQI
IENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIKGCMVGGPF
AIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAK
APIILTSRADSEETKLNSIALGVLMAAKA"
misc_feature 154346..155245
/gene="ptb"
/locus_tag="CD196_0124"
/note="phosphate butyryltransferase; Validated; Region:
PRK05805"
/db_xref="CDD:180267"
misc_feature 154355..155242
/gene="ptb"
/locus_tag="CD196_0124"
/note="Phosphotransacetylase [Energy production and
conversion]; Region: Pta; COG0280"
/db_xref="CDD:30628"
gene 155270..156349
/gene="buk"
/locus_tag="CD196_0125"
/db_xref="GeneID:8466468"
CDS 155270..156349
/gene="buk"
/locus_tag="CD196_0125"
/note="catalyzes the phosphorylation of 2-butanoate to
butanoyl phosphate"
/codon_start=1
/transl_table=11
/product="butyrate kinase"
/protein_id="YP_003213176.1"
/db_xref="GI:260681891"
/db_xref="GeneID:8466468"
/translation="MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYE
KVSDQFEFRKQVIEEALKEGGVKTSELDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVG
VLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELEDVARISGMPEISRASVVHALN
QKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGEGPFSPERS
GGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLV
YEAMAYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGE
DEMIALAQGGLRVLTGEEEAQVYDN"
misc_feature 155291..155887
/gene="buk"
/locus_tag="CD196_0125"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cd00012"
/db_xref="CDD:212657"
misc_feature order(155300..155311,155315..155317,155321..155323,
155735..155737,155822..155833)
/gene="buk"
/locus_tag="CD196_0125"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
misc_feature <155759..156193
/gene="buk"
/locus_tag="CD196_0125"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:214262"
gene 156408..157016
/locus_tag="CD196_0126"
/db_xref="GeneID:8465904"
CDS 156408..157016
/locus_tag="CD196_0126"
/codon_start=1
/transl_table=11
/product="ATP/GTP-binding protein"
/protein_id="YP_003213177.1"
/db_xref="GI:260681892"
/db_xref="GeneID:8465904"
/translation="MNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPI
DSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDML
FVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKVAKE
VSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM"
gene 157059..157274
/locus_tag="CD196_0127"
/db_xref="GeneID:8463332"
CDS 157059..157274
/locus_tag="CD196_0127"
/codon_start=1
/transl_table=11
/product="ferredoxin"
/protein_id="YP_003213178.1"
/db_xref="GI:260681893"
/db_xref="GeneID:8463332"
/translation="MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPAT
VFEMEKCIGCASCATMCPDVVITVERD"
misc_feature <157092..>157244
/locus_tag="CD196_0127"
/note="The HCP family of iron-sulfur proteins includes
hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
and carbon monoxide dehydrogenase (CODH), all of which
contain [Fe4-S4] metal clusters at their active sites.
These proteins have a conserved...; Region: HCP_like;
cl14655"
/db_xref="CDD:187409"
misc_feature 157095..157244
/locus_tag="CD196_0127"
/note="4Fe-4S dicluster domain; Region: Fer4_7; pfam12838"
/db_xref="CDD:205099"
gene 157303..158382
/locus_tag="CD196_0128"
/db_xref="GeneID:8463333"
CDS 157303..158382
/locus_tag="CD196_0128"
/note="catalyzes the coenzyme A-dependent oxidation of
3-methyl-2-oxobutanoate coupled to the reduction of
ferredoxin producing S-(2-methylpropanoyl)-CoA"
/codon_start=1
/transl_table=11
/product="2-ketoisovalerate ferredoxin reductase"
/protein_id="YP_003213179.1"
/db_xref="GI:260681894"
/db_xref="GeneID:8463333"
/translation="MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELP
KIGGAFVQAESEVSAINMVYGGAGAGARVMTSSSSPGVALKQEGITYAVGAEVPCVVL
NVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAPATVQEAVDMIMEAFDVADYY
RSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVINSLYLEPEV
LEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKA
GLIRPKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGKLPVYFHGRPGGM
TPTPAEIVEKAKKIIAGELVAGGAR"
misc_feature 157303..158358
/locus_tag="CD196_0128"
/note="2-ketoisovalerate ferredoxin reductase; Validated;
Region: PRK07119"
/db_xref="CDD:180853"
misc_feature 157324..157812
/locus_tag="CD196_0128"
/note="Pyrimidine (PYR) binding domain of pyruvate
ferredoxin oxidoreductase (PFOR), indolepyruvate
ferredoxin oxidoreductase alpha subunit (IOR-alpha), and
related proteins; Region: TPP_PYR_PFOR_IOR-alpha_like;
cd07034"
/db_xref="CDD:132917"
misc_feature order(157369..157374,157390..157392,157402..157404,
157411..157413,157453..157464,157483..157488,
157492..157500,157507..157509,157513..157515,
157564..157566,157573..157575,157585..157587,
157624..157629,157678..157683)
/locus_tag="CD196_0128"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132917"
misc_feature order(157369..157374,157381..157386,157390..157392,
157408..157413,157453..157464,157483..157488,
157492..157500,157507..157509,157513..157515,
157564..157566,157573..157575)
/locus_tag="CD196_0128"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132917"
misc_feature order(157384..157386,157468..157470)
/locus_tag="CD196_0128"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132917"
misc_feature order(157390..157392,157618..157620)
/locus_tag="CD196_0128"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:132917"
misc_feature 158062..>158217
/locus_tag="CD196_0128"
/note="Transketolase, C-terminal domain; Region:
Transketolase_C; pfam02780"
/db_xref="CDD:202391"
gene 158382..159134
/locus_tag="CD196_0129"
/db_xref="GeneID:8463334"
CDS 158382..159134
/locus_tag="CD196_0129"
/codon_start=1
/transl_table=11
/product="subunit of oxidoreductase"
/protein_id="YP_003213180.1"
/db_xref="GI:260681895"
/db_xref="GeneID:8463334"
/translation="MAVVFKKTEGLQDTQTHYCPGCTHGIIHRLVGEVLEELGVLGDA
VGVVPVGCSVLGYKYFNCDTQEAAHGRAPAAATGIKRVHPENTVFTYQGDGDLASIGT
AEIVHAAARGEKITTIFVNNTTYGMTGGQMAPTTLVGQRATTAQSGRNAETQGYPIRV
SEMLATLTGAVFVERVAVDTPAHVRQAKKAIKKAFQVQQAGLGFGIVEVLSTCPTNWG
LAPNDALQWLRDNMIPYYPLGNFKNVEVEEVK"
misc_feature 158391..159125
/locus_tag="CD196_0129"
/note="Pyruvate:ferredoxin oxidoreductase and related
2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy
production and conversion]; Region: PorB; COG1013"
/db_xref="CDD:31217"
misc_feature 158433..159029
/locus_tag="CD196_0129"
/note="Thiamine pyrophosphate (TPP) enzyme family,
TPP-binding module; found in many key metabolic enzymes
which use TPP (also known as thiamine diphosphate) as a
cofactor. These enzymes include, among others, the E1
components of the pyruvate, the acetoin and...; Region:
TPP_enzymes; cl01629"
/db_xref="CDD:207466"
misc_feature order(158586..158588,158658..158669,158745..158747,
158751..158753)
/locus_tag="CD196_0129"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:48162"
gene 159135..159692
/locus_tag="CD196_0130"
/db_xref="GeneID:8463335"
CDS 159135..159692
/locus_tag="CD196_0130"
/codon_start=1
/transl_table=11
/product="subunit of oxidoreductase"
/protein_id="YP_003213181.1"
/db_xref="GI:260681896"
/db_xref="GeneID:8463335"
/translation="MSTARVICAGFGGQGVMSMGQLLTYAGMLEGKEVSWLPSYGPEM
RGGTANCAVTVSNEPVGSPLITDDATAAILLNIPAFEKFKDDVIPGGKIIVNSSLIKE
KVDRTDVDVYYIPANELAAELGNDKVANMIMLGAYLKVSDTVDIESVLEAFKKVFGPR
KEKFVPLNREALQKGMDATCSKATN"
misc_feature 159159..159665
/locus_tag="CD196_0130"
/note="2-oxoglutarate ferredoxin oxidoreductase subunit
gamma; Validated; Region: PRK08537"
/db_xref="CDD:181462"
misc_feature 159168..159659
/locus_tag="CD196_0130"
/note="Pyruvate ferredoxin/flavodoxin oxidoreductase;
Region: POR; pfam01558"
/db_xref="CDD:201860"
gene 159802..161208
/locus_tag="CD196_0131"
/db_xref="GeneID:8463336"
CDS 159802..161208
/locus_tag="CD196_0131"
/codon_start=1
/transl_table=11
/product="phosphoglucomutase/phosphomannomutase mutase"
/protein_id="YP_003213182.1"
/db_xref="GI:260681897"
/db_xref="GeneID:8463336"
/translation="MNYKNIIQITSFSIMKGESLVRKYFGTDGVRGVANTELTCDLAY
KLGRAGGFVLAQGDHRVKVVVGKDTRISGDMLEASLIAGLMSVGCDVITVGIIPTPAV
AYLTRKYGADCGVVISASHNPVEYNGIKFFNKNGYKLDDEIELKIEEYIDDIDKIDCL
PIGENVGRKLHEHCAQRDYVDYLKSIISTDFKGLKVVLDCANGASYKVAPIVFDELGA
SVISINSSPDGNNINYKCGSTHPEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIV
DGDHIMILSALNLKKNNKLAQDTLVVTVMSNIGLTIAAKENGINLSTTAVGDRYVLED
MVKNGYNLGGEQSGHMIFLDYNTTGDGVLSSLILANIILQEKKPLSEIASIMSQYPQV
LVNATIKNENKNKYMEYPEIKTEIERIESILNGNGRVLIRPSGTEPLVRVMLEGKEEG
QIKELATNLANLIQEKLS"
misc_feature 159868..161205
/locus_tag="CD196_0131"
/note="phosphoglucosamine mutase; Provisional; Region:
glmM; PRK14316"
/db_xref="CDD:184616"
misc_feature 159871..161181
/locus_tag="CD196_0131"
/note="GlmM is a bacterial phosphoglucosamine mutase
(PNGM) that belongs to the alpha-D-phosphohexomutase
superfamily. It is required for the interconversion of
glucosamine-6-phosphate and glucosamine-1-phosphate in the
biosynthetic pathway of...; Region: GlmM; cd05802"
/db_xref="CDD:100095"
misc_feature order(159877..159879,159883..159885,159892..159894,
160159..160167,160189..160191,160579..160581,
160585..160587,160591..160596,160714..160716,
160777..160785,160834..160836,160840..160842,
160846..160848,161095..161097,161101..161109,
161122..161124)
/locus_tag="CD196_0131"
/note="active site"
/db_xref="CDD:100095"
misc_feature order(159883..159885,160159..160161,160594..160596,
160714..160716,160777..160779,160783..160785,
160834..160836,160840..160842,160846..160848,
161095..161097,161101..161109,161122..161124)
/locus_tag="CD196_0131"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100095"
misc_feature order(160159..160161,160579..160581,160585..160587,
160591..160593)
/locus_tag="CD196_0131"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:100095"
gene 161475..163307
/gene="glmS"
/locus_tag="CD196_0132"
/db_xref="GeneID:8463337"
CDS 161475..163307
/gene="glmS"
/locus_tag="CD196_0132"
/note="[isomerizing]"
/codon_start=1
/transl_table=11
/product="glucosamine--fructose-6-phosphate
aminotransferase"
/protein_id="YP_003213183.1"
/db_xref="GI:260681898"
/db_xref="GeneID:8463337"
/translation="MCGIVGYLGSRKAAEVIVEGLSKLEYRGYDSAGVAVNSSNEEEL
NIRKFKGRLSVLAEDLEKNPIDGNLGIGHTRWATHGEPSDVNSHPHFNQAKTIAVVHN
GIIENYMEIKEELISEGVKFESQTDTEVIAHLVDKYYEGNLLDAVYKTISKLRGAYAL
GVICKEHGNELVAVRKDSPLVVGVGEGENFIASDIPALLKYTRDVYFLENGEVVHLKD
ENVTVYDSNRNLVEKEVFHVTWDVEAASKGGYDYFMSKEIHEQPTGVRETLERRLDDN
GNIILDSINISKEDLEKINKVYIVACGTAYNAGLLGKYAIEKFVNIPVITDIASEFRY
SDPFVDENSLVILVSQSGETADTLAVLRDSKAKGARILSITNVVGSSIARESDDVFYT
WAGPEVAVASTKAYTTQITSLYMIALDFAIKKGTITREFYDSMISKMKEIPSKIQEIL
DNEEYIKEVAKTVVSSEHAFYLGRGIDYSLAMEGSLKLKEISYIHAEAFAAGELKHGT
IALIEKGTPVIAIATQEKLFEKMVSNMEEVRARGAYVVAIAQSHNKDVEKAADKIIYI
PNSDDILSPILAVVPMQLLAYHVSVLRGCDVDKPRNLAKSVTVE"
misc_feature 161475..163304
/gene="glmS"
/locus_tag="CD196_0132"
/note="glucosamine--fructose-6-phosphate aminotransferase;
Reviewed; Region: PRK00331"
/db_xref="CDD:178980"
misc_feature 161478..162122
/gene="glmS"
/locus_tag="CD196_0132"
/note="Glutamine amidotransferases class-II
(Gn-AT)_GFAT-type. This domain is found at the N-terminus
of glucosamine-6P synthase (GlmS, or GFAT in humans). The
glutaminase domain catalyzes amide nitrogen transfer from
glutamine to the appropriate substrate. In...; Region:
GFAT; cd00714"
/db_xref="CDD:48478"
misc_feature order(161478..161480,161553..161555,161697..161702,
161706..161711,161736..161738,161778..161783,
161853..161858)
/gene="glmS"
/locus_tag="CD196_0132"
/note="glutaminase active site [active]"
/db_xref="CDD:48478"
misc_feature 162360..162737
/gene="glmS"
/locus_tag="CD196_0132"
/note="SIS (Sugar ISomerase) domain repeat 1 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_1; cd05008"
/db_xref="CDD:88405"
misc_feature order(162378..162383,162411..162416,162423..162428,
162447..162449,162453..162455,162465..162467,
162474..162476,162540..162542)
/gene="glmS"
/locus_tag="CD196_0132"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88405"
misc_feature order(162384..162389,162519..162527)
/gene="glmS"
/locus_tag="CD196_0132"
/note="active site"
/db_xref="CDD:88405"
misc_feature 162834..163298
/gene="glmS"
/locus_tag="CD196_0132"
/note="SIS (Sugar ISomerase) domain repeat 2 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_2; cd05009"
/db_xref="CDD:88406"
misc_feature order(162897..162899,162939..162941,162951..162953,
162957..162959,162963..162965,162969..162971,
162981..162983,162987..162995,162999..163010,
163059..163064,163074..163076,163080..163085,
163275..163280,163293..163295)
/gene="glmS"
/locus_tag="CD196_0132"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88406"
misc_feature order(162933..162935,162942..162944)
/gene="glmS"
/locus_tag="CD196_0132"
/note="active site"
/db_xref="CDD:88406"
gene 163760..165055
/locus_tag="CD196_0133"
/db_xref="GeneID:8466162"
CDS 163760..165055
/locus_tag="CD196_0133"
/codon_start=1
/transl_table=11
/product="thiosulfate sulfurtransferase"
/protein_id="YP_003213184.1"
/db_xref="GI:260681899"
/db_xref="GeneID:8466162"
/translation="MTNDFKKEKKEDYFVNLKAISTEVLQEKMQDNAWVIVDTRLNDA
YNGWKLDGVKRGGHIKRAVDFSANWLNVYSDRKDEVLEQALKTKRIDLDKNIVLYDAN
GKDALVVADYLSKKGYKYLYKYDIKQWADDENLPMERYKNYQMIVPAFIIKDILDGKI
PETFEDSKNIKMIEASWGEESYTKGHIPTSVHVNTDIIEPPPTWMLDNDDNLTKFALD
YGLTKDDTVIVSSITPMASYRLAVILRYIGVKDVRVLNGGTNSWLSAGYELEFISNPK
HSCTNFGADIPVNSQLVVTTSELRQKLKEKNKFILVDNRTWDEHIGKVSGYTYYDKKG
RIPGALYGHSGSNSVSLEEYRNIDNTMRNKSEILEMWDKENIDVNKQLIFMCGSGWRA
AEVLTYANVIGVENTSLYSDGWMGWSLDNSNLIEVGEHK"
misc_feature 163820..>164089
/locus_tag="CD196_0133"
/note="Rhodanese-like domain; Region: Rhodanese;
pfam00581"
/db_xref="CDD:201322"
misc_feature 164057..164059
/locus_tag="CD196_0133"
/note="active site residue [active]"
/db_xref="CDD:29073"
misc_feature 164162..165046
/locus_tag="CD196_0133"
/note="Rhodanese-related sulfurtransferase [Inorganic ion
transport and metabolism]; Region: SseA; COG2897"
/db_xref="CDD:32722"
misc_feature 164255..164557
/locus_tag="CD196_0133"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cl00125"
/db_xref="CDD:212175"
misc_feature 164447..164449
/locus_tag="CD196_0133"
/note="active site residue [active]"
/db_xref="CDD:29073"
misc_feature 164639..165013
/locus_tag="CD196_0133"
/note="Thiosulfate sulfurtransferase (TST), C-terminal,
catalytic domain. TST contains 2 copies of the Rhodanese
Homology Domain; this is the second repeat. Only the
second repeat contains the catalytically active Cys
residue; Region: TST_Repeat_2; cd01449"
/db_xref="CDD:29080"
misc_feature 164915..164917
/locus_tag="CD196_0133"
/note="active site residue [active]"
/db_xref="CDD:29080"
gene 165532..166269
/locus_tag="CD196_0134"
/db_xref="GeneID:8463338"
CDS 165532..166269
/locus_tag="CD196_0134"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213185.1"
/db_xref="GI:260681900"
/db_xref="GeneID:8463338"
/translation="MKKVKLAISFFILMIIGMTISYADTSINTRYNRLSKALEISEAN
FKFYNVKINSVINHNLSNKEFHNIFIEIINNLKLDKKGINWNQKGSGDKIQLCATIKG
SDKEISIKGINKNNKESYIVVDILDNKVYKHKEVIYSNVENVLNKYSSQVDVSACIVG
EYTKRLQNNKYDDILQKILYNMSAKQIDEVKDVNFLSITAYSKVLNDYELEYLGEKIN
LNIGIKYNEDDGKTLIYIATPIIKLDY"
misc_feature 165757..166266
/locus_tag="CD196_0134"
/note="Protein of unknown function (DUF1779); Region:
DUF1779; pfam08680"
/db_xref="CDD:204024"
gene 166272..167543
/gene="murA"
/locus_tag="CD196_0135"
/db_xref="GeneID:8463339"
CDS 166272..167543
/gene="murA"
/locus_tag="CD196_0135"
/note="adds enolpyruvyl to UDP-N-acetylglucosamine as a
component of cell wall formation; gram-positive bacteria
have 2 copies of MurA which are active"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylglucosamine
1-carboxyvinyltransferase"
/protein_id="YP_003213186.1"
/db_xref="GI:260681901"
/db_xref="GeneID:8463339"
/translation="MRRSKNMAKIIVKKSNPLKGSVKIDGAKNAVLPIIAATLLANGK
STLNGVPNLRDVHVISDLLRHVGAEVEYKENTLTVDASNIKTCEAPYELVRKMRASFL
VMGPLLARFNSTKISMPGGCAIGTRPIDLHLKGFKALGAKIEMDHGFVEAATEKLVGN
KLYLDFPSVGATENIMMAASLAEGTTIIENAAEEPEIVDLANFLNEMGADVKGAGTNT
IKIKGVKELKGAEHNVIPDRIEAATYMVAAAMTKGDITVENVLMEHLKPVVAKLREAG
CEITEMDNSVRVVGPKVLKPIDIKTLPHPGFPTDVQAQFMAMLTVANGTGVVIETVFE
NRFMHVAEFNRMGANIKIDGRSAVVNGVDELHGAAVNATDLRAGAALILCGLIAEGET
QIGEIYHIQRGYVDIDKKITALGGQIEIVED"
misc_feature 166290..167528
/gene="murA"
/locus_tag="CD196_0135"
/note="UDP-N-acetylglucosamine 1-carboxyvinyltransferase;
Region: murA; TIGR01072"
/db_xref="CDD:162190"
misc_feature 166323..167513
/gene="murA"
/locus_tag="CD196_0135"
/note="UDP-N-acetylglucosamine enolpyruvyl transferase
catalyzes enolpyruvyl transfer as part of the first step
in the biosynthesis of peptidoglycan, a component of the
bacterial cell wall. The reaction is phosphoenolpyruvate +
UDP-N-acetyl-D-glucosamine =...; Region: UdpNAET; cd01555"
/db_xref="CDD:30128"
misc_feature order(166341..166352,166971..166982)
/gene="murA"
/locus_tag="CD196_0135"
/note="hinge; other site"
/db_xref="CDD:30128"
misc_feature order(166356..166358,166563..166565,166575..166577,
166650..166667,166767..166769,166776..166781,
167199..167201)
/gene="murA"
/locus_tag="CD196_0135"
/note="active site"
/db_xref="CDD:30128"
gene 167630..168694
/gene="spoIIC"
/locus_tag="CD196_0136"
/db_xref="GeneID:8466347"
CDS 167630..168694
/gene="spoIIC"
/locus_tag="CD196_0136"
/codon_start=1
/transl_table=11
/product="stage II sporulation protein D"
/protein_id="YP_003213187.1"
/db_xref="GI:260681902"
/db_xref="GeneID:8466347"
/translation="MKNPLVVLLGFVTCSVLVPSLITLVSYKNVELTEKPESPVSINK
TIKKSDIEDKGNKEEKSTVSYETVNKKAPIINVYNHITGKTEKMDMENYLCGVLAGEM
SSEFDIEALKAQSVAARTYVVYKQEHGKSSKHKNAVVCTDYKHCQEYKSYDTLKKLNG
EEWIKNKYSKIQEAVRGTKGQIITYNDKAILPLYFSTSSGKTENSEEVFSAKYPYLKS
VESPYDKYSPKFASTLKISNTDFVKSLRRAYSTIVIDVNNLSKQVSITKRSDAGTVEK
IKLGNKELTGKDIRTVFKLNSANFDIKFGEGYIDFVVKGYGHGVGMSQWGAEGMAEEG
YKYYDILSHYYTDTKIKDIY"
misc_feature 167852..168184
/gene="spoIIC"
/locus_tag="CD196_0136"
/note="Stage II sporulation protein; Region: SpoIID;
pfam08486"
/db_xref="CDD:203956"
misc_feature 167885..168682
/gene="spoIIC"
/locus_tag="CD196_0136"
/note="SpoIID/LytB domain; Region: SpoIID_LytB; TIGR02669"
/db_xref="CDD:200209"
gene 168760..169428
/locus_tag="CD196_0137"
/db_xref="GeneID:8466664"
CDS 168760..169428
/locus_tag="CD196_0137"
/codon_start=1
/transl_table=11
/product="cell wall endopeptidase"
/protein_id="YP_003213188.1"
/db_xref="GI:260681903"
/db_xref="GeneID:8466664"
/translation="MKKKLLEKDGFYLSLFVCVCLLAVGGVWFTNNNVDKLASNKGIM
ENANKDSEEEIHLIEKDKKDAIPTATDSKQNLEKAKSKEENKSSTTKLNYIGDKVIRG
YSEKEPSYSKTLDVWETHKGVDISCTKGKEVKSLLNGIVVDVFNDEEYGQSVKIKSDN
NIVVVYSNLDKNVSVKKEQKVTEGQSLGTVGSTSQIESEEGIHVHLEAYSGEKSIDPM
SLIK"
misc_feature <169099..169413
/locus_tag="CD196_0137"
/note="Membrane proteins related to metalloendopeptidases
[Cell envelope biogenesis, outer membrane]; Region: NlpD;
COG0739"
/db_xref="CDD:31082"
misc_feature 169117..169410
/locus_tag="CD196_0137"
/note="Peptidase family M23; Region: Peptidase_M23;
pfam01551"
/db_xref="CDD:201854"
gene 169526..169786
/gene="spoIIID"
/locus_tag="CD196_0138"
/db_xref="GeneID:8463340"
CDS 169526..169786
/gene="spoIIID"
/locus_tag="CD196_0138"
/codon_start=1
/transl_table=11
/product="stage III sporulation protein D"
/protein_id="YP_003213189.1"
/db_xref="GI:260681904"
/db_xref="GeneID:8463340"
/translation="MRSHIEERAIVVAKYILEKNTTVRQTAKTFGVSKSTIHKDVTER
LKEINPSLAKEVKNVLDKNKSERHIRGGLATKLKYEKEHKKM"
misc_feature 169529..169774
/gene="spoIIID"
/locus_tag="CD196_0138"
/note="Stage III sporulation protein D; Region: SpoIIID;
pfam12116"
/db_xref="CDD:152551"
gene 169983..171002
/gene="mreB1"
/locus_tag="CD196_0139"
/db_xref="GeneID:8466674"
CDS 169983..171002
/gene="mreB1"
/locus_tag="CD196_0139"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein Mbl"
/protein_id="YP_003213190.1"
/db_xref="GI:260681905"
/db_xref="GeneID:8466674"
/translation="MAGADIGIDLGTANVLVYVSGKGIVLEEPSVVAIDKRTDSVLAV
GEEAKKMIGRTPGNIVAIRPLRDGVISDYDVTEKMLKSFIDKIVDKKGFGRFFMPRIM
VCVPTGVTEVEKRAVEDATRQAGAREVYIIEEPIAAAIGAGVDISQPNGNMIIDIGGG
TVDIAVISLGGAVVSESIKVGGDRFDDAIVKYMKKQHNLLIGERTAEKIKFEIGSAFK
REEEKYMKITGRNLITGLPSSITINSTEMLEALRECVEQIVVATHAVLEKTPPELAAD
IGDVGIIMTGGGSLLYGLDKIIEQRTGITVTIADEPLSCVAKGTGIALGSIDLLETGG
SFKRK"
misc_feature 169983..170999
/gene="mreB1"
/locus_tag="CD196_0139"
/note="rod shape-determining protein Mbl; Provisional;
Region: PRK13928"
/db_xref="CDD:184402"
misc_feature 169998..170966
/gene="mreB1"
/locus_tag="CD196_0139"
/note="MreB and similar proteins; Region: MreB_like;
cd10225"
/db_xref="CDD:212668"
misc_feature order(170007..170009,170013..170024,170184..170186,
170382..170384,170448..170450,170454..170465,
170526..170531,170601..170603,170610..170615,
170838..170846,170850..170855,170919..170921,
170928..170930)
/gene="mreB1"
/locus_tag="CD196_0139"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212668"
misc_feature order(170007..170009,170448..170450)
/gene="mreB1"
/locus_tag="CD196_0139"
/note="Mg binding site [ion binding]; other site"
/db_xref="CDD:212668"
misc_feature order(170085..170087,170133..170135,170157..170159,
170427..170429,170433..170435,170493..170495,
170589..170591,170595..170597,170664..170666,
170688..170690,170697..170699,170787..170789,
170796..170798,170892..170894,170964..170966)
/gene="mreB1"
/locus_tag="CD196_0139"
/note="putative protofilament interaction site
[polypeptide binding]; other site"
/db_xref="CDD:212668"
misc_feature order(170409..170414,170436..170438,170814..170822,
170895..170897,170901..170903,170910..170912)
/gene="mreB1"
/locus_tag="CD196_0139"
/note="RodZ interaction site [polypeptide binding]; other
site"
/db_xref="CDD:212668"
gene 171018..171446
/gene="fabZ"
/locus_tag="CD196_0140"
/db_xref="GeneID:8466338"
CDS 171018..171446
/gene="fabZ"
/locus_tag="CD196_0140"
/note="in Pseudomonas aeruginosa this enzyme is a trimer
of dimers; essential for membrane formation; performs
third step of type II fatty acid biosynthesis; catalyzes
dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP"
/codon_start=1
/transl_table=11
/product="(3R)-hydroxymyristoyl-ACP dehydratase"
/protein_id="YP_003213191.1"
/db_xref="GI:260681906"
/db_xref="GeneID:8466338"
/translation="MLNIDEIKKLIPHRYPFLLVDKITELEVGKRAVGIKNVTVNEPF
FQGHFPEYPLMPGVLIVEALAQVCGVAMMSVEENKGKLGVFAGIDKVRIKREVRPGDT
LTMEIEMTTLRKNIAKADAKAYVGEELVCKGELMFALVEK"
misc_feature 171048..171437
/gene="fabZ"
/locus_tag="CD196_0140"
/note="FabZ is a 17kD beta-hydroxyacyl-acyl carrier
protein (ACP) dehydratase that primarily catalyzes the
dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP,
the third step in the elongation phase of the bacterial/
plastid, type II, fatty-acid...; Region: FabZ; cd01288"
/db_xref="CDD:48033"
gene complement(171557..172075)
/locus_tag="CD196_0141"
/db_xref="GeneID:8466065"
CDS complement(171557..172075)
/locus_tag="CD196_0141"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213192.1"
/db_xref="GI:260681907"
/db_xref="GeneID:8466065"
/translation="MFLLYLAKVNYSDDDVIQMLSSVLKTIINENTIVVCIGTDRAIG
DTLGPLVGTILKNSNFKYPVYGTLDNPIHALNIYESLDTIKNTHIQGNFLAIDACLGS
QSNIGNIQIREGPILPGKGVGKKLPQIGNYSIVGIVDKIDENNKLSFNNIRLSFILDL
AETIALALLVST"
misc_feature complement(171581..172054)
/locus_tag="CD196_0141"
/note="Protein of unknown function (DUF1256); Region:
DUF1256; cl06087"
/db_xref="CDD:141909"
gene 172495..173688
/gene="metE"
/locus_tag="CD196_0142"
/db_xref="GeneID:8463341"
CDS 172495..173688
/gene="metE"
/locus_tag="CD196_0142"
/codon_start=1
/transl_table=11
/product="S-adenosylmethionine synthetase"
/protein_id="YP_003213193.1"
/db_xref="GI:260681908"
/db_xref="GeneID:8463341"
/translation="MARHLFTSESVTEGHPDKICDQISDSILDALLEKDPQSRVACET
TVTTGLVLVAGEISTSAYVDIPKLVRETVREIGYTRAKYGFDCDTCAVITSIDEQSGD
IAMGVDEGLESKTGEEIEEEIEKVGAGDQGIMFGFACNETPELMPLPISLAHKLSRRL
TEVRKTGLVDYLRPDGKTQVTVEYEGSKAVRVHTVLISAQHCETVSNDKIREDLINHV
IKEVIPAELLDEETKIYINPTGRFVIGGPQGDTGLTGRKIIIDTYGGYSRHGGGAFSG
KDPTKVDRSAAYAARYVAKNIVAAGLADKCEIELAYAIGIARPLSIFIDTFGTGKVSE
EKLVELVNKHFDLRPGAIIRDLDLRKPLYKKVAAYGHFGRTDIDLPWERTDKVEQLRK
DALGE"
misc_feature 172501..173676
/gene="metE"
/locus_tag="CD196_0142"
/note="S-adenosylmethionine synthetase; Validated; Region:
PRK05250"
/db_xref="CDD:179974"
misc_feature 172501..172794
/gene="metE"
/locus_tag="CD196_0142"
/note="S-adenosylmethionine synthetase, N-terminal domain;
Region: S-AdoMet_synt_N; pfam00438"
/db_xref="CDD:201226"
misc_feature 172867..173220
/gene="metE"
/locus_tag="CD196_0142"
/note="S-adenosylmethionine synthetase, central domain;
Region: S-AdoMet_synt_M; pfam02772"
/db_xref="CDD:202384"
misc_feature 173224..173643
/gene="metE"
/locus_tag="CD196_0142"
/note="S-adenosylmethionine synthetase, C-terminal domain;
Region: S-AdoMet_synt_C; pfam02773"
/db_xref="CDD:111646"
gene 174004..175101
/locus_tag="CD196_0143"
/db_xref="GeneID:8466312"
CDS 174004..175101
/locus_tag="CD196_0143"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213194.1"
/db_xref="GI:260681909"
/db_xref="GeneID:8466312"
/translation="MSGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGI
IGGIISMVLFSWFGAEVIDKGRELKLKEPIKIYQVYCGKYLGTFFEWFGPLFLFGTLV
IMIAGAGATLSEYYGLNPYVGRIGMAIVSLITVSLGLTRLSKILGNIGPIIIIFTLLV
GAISLFSNIDALSNAGNMVDSLNIKTATSNGYFSGVLYTCYNVIIVITFLTGMGASAV
NKKDAVWGGIVGGVALMAAAIMMNLALLSNIGNIYTKEIPALYLADKISPIIGILFSV
VLLLGIYTTAVPLLWSVTNRFVEDDHPKFKIITIVVSILACIGGLLPFDKLVGTLYPY
TGYMGILILLCMLYRRITKTEGYKENKSEIS"
misc_feature 174049..175047
/locus_tag="CD196_0143"
/note="Uncharacterized membrane protein [Function
unknown]; Region: COG3949"
/db_xref="CDD:33730"
gene 175365..177584
/locus_tag="CD196_0144"
/db_xref="GeneID:8463342"
CDS 175365..177584
/locus_tag="CD196_0144"
/codon_start=1
/transl_table=11
/product="DNA-binding protein"
/protein_id="YP_003213195.1"
/db_xref="GI:260681910"
/db_xref="GeneID:8463342"
/translation="MEKLEGMISEIVFKNEDNGYTIAHLVNENDEIVVVGCMPTLAIG
ESIEVEGKWVNHKIYGTQFEVNSFMPVTPSSLEGIYVYLSSGMIHGIGEKMAKRIIDK
FGVDTLEVIQNSPEKLQEVEGIGSKKVKQIVKSYEEDRELRNIIIQLSPFGITPNYCL
KIYKKYKSSAIEVINKNPYQLAEDIRGIGFKVADSIASKIGIDKNSKDRICQGILYTL
NKSLSNGHTYLPEHVLIQDSEKLLELNGEIIKECVMMLVYNQKIHIEKVNNENLIYLM
PYYLAENGVCSQIVKLSQYEFEDLKIDIDNEINVLEEDKKIKLAEKQILAVKESVNSG
VLIITGGPGTGKTTTINAIIDIFENNGKSVTLAAPTGRAAKRMSETSNKEAKTIHRLL
EMGFSTDDDLTFFKDEEDPINSDVIIVDEVSMVDIILMYNLLRAIKLGTRVILVGDSD
QLPSVGAGNVLKDMINSNIINVVKLNEIFRQAQESMIIVNAHKINNGEPLYLNTKGKD
FFFIRKSTNEEILNEIIGLVNERLPKFYKVDKLKDIQVLSSMRKGELGVTNLNIELQK
YLNKKEKFKVEESFSKRLFRVGDKVMQVKNNYTKKWETEDQKESGEGIYNGDIGYVYH
IDKDKKTIYILFDQTKIVSYLYDELDEIDHSFCTTIHKSQGSEFPVVVLPIAWAPPML
LSRNLLYTAVTRAKKLVVLVGDVKYLEYMIKNNRVNQRYSNLGYKLNKFKQEGLLIE"
misc_feature 175374..177512
/locus_tag="CD196_0144"
/note="helicase, putative, RecD/TraA family; Region:
recD_rel; TIGR01448"
/db_xref="CDD:162366"
misc_feature 176316..176861
/locus_tag="CD196_0144"
/note="AAA domain; Region: AAA_30; pfam13604"
/db_xref="CDD:205782"
misc_feature 177117..177470
/locus_tag="CD196_0144"
/note="Family description; Region: UvrD_C_2; pfam13538"
/db_xref="CDD:205716"
gene 177587..178369
/locus_tag="CD196_0145"
/db_xref="GeneID:8463343"
CDS 177587..178369
/locus_tag="CD196_0145"
/codon_start=1
/transl_table=11
/product="phosphoribosyl transferase"
/protein_id="YP_003213196.1"
/db_xref="GI:260681911"
/db_xref="GeneID:8463343"
/translation="MKICNDNFIKNFKNMINKCLDFIYPENISCIICDKSIKKTNTYS
ICKSCFKEMNFIQDGCMKCGKPIIRHSIEKEFIEECSYCFNKDFYFDKSISCIEYNDV
TKKMVLGLKYNQKTFMAKYIAQIMKEKLYLENIKFDYILFVPLHKKRLNKRGFNQAQK
IAFNLSKIVNIPLLDCISRKKYTRMLYKLNKKERKEELKNVFVVKENVKLINNKNILL
IDDIFTTGLTTNEISKLLKLSGANKVFVLTLLTKANDNYIME"
misc_feature 177764..178333
/locus_tag="CD196_0145"
/note="comF family protein; Region: comF; TIGR00201"
/db_xref="CDD:161762"
misc_feature 177950..178342
/locus_tag="CD196_0145"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(178016..178018,178043..178045,178244..178252,
178256..178270,178340..178342)
/locus_tag="CD196_0145"
/note="active site"
/db_xref="CDD:206754"
gene 178701..180614
/locus_tag="CD196_0146"
/db_xref="GeneID:8463344"
CDS 178701..180614
/locus_tag="CD196_0146"
/codon_start=1
/transl_table=11
/product="transcription antiterminator"
/protein_id="YP_003213197.1"
/db_xref="GI:260681912"
/db_xref="GeneID:8463344"
/translation="MICLNKRQENLLTTLLLKEEFINVNKIANDFECSERTIRNDCKY
IDEWLSTFCNAYIKRKPNIGIKFSGDGTDKILVNQKLRGEVKRVNSELHKQVEILNLL
LCNNKKVTLNDLSNKLYINKNIVREEISKLSVALNNYNLNVSTKKGSGIYIEGDEKDI
RIMLVSFLFKYIDKYRLNIDEIEYFHIVDIIIVKNIMLTIEEDMDIRLTDISFKQLML
FLLINIIRIRLGNSLKVSNTKKELKLKMLILDIEDELKSNLSIVLNYEEKLFIESLIL
GMNKQINSNNIKKSLYLNEELASYTKKIINLVSEESGINFNNDILLYEQLICHLNVTM
HQMKSNVYLENPLLDNIKTKFCFLFTVISSSIEIELKGKQITEDEIGYLTLHFQTSLE
RKYSKRESNKKASIVCPFSFGVSMLLKVKIEKRFDNIKIIETLREEDLKRDNFNKTID
FIIAFQEYENIQKPIFITTPLFTDEDENKLKEFTNKIKEKDTSYKLMNRLMMSDYLIR
ELEHDDIYEAITYLTNLLIEKHYAEKEYLQSIITREKSYPTNVGKGILFPHGDMKYIK
QSVLCFARLKTPIKIRNGKDIKIILLLAYKKDDDRKVFRELFKEISNLTEDENMLDIL
SKCDIEKVKDILI"
misc_feature 178710..180233
/locus_tag="CD196_0146"
/note="Transcriptional antiterminator [Transcription];
Region: BglG; COG3711"
/db_xref="CDD:33506"
misc_feature 179604..179870
/locus_tag="CD196_0146"
/note="PRD domain; Region: PRD; pfam00874"
/db_xref="CDD:201484"
misc_feature 179904..180161
/locus_tag="CD196_0146"
/note="PTS_IIB_bgl_like: the PTS (phosphotransferase
system) IIB domain of a family of sensory systems composed
of a membrane-bound sugar-sensor (similar to BglF) and a
transcription antiterminator (similar to BglG) which
regulate expression of genes involved...; Region:
PTS_IIB_bgl_like; cd05568"
/db_xref="CDD:99910"
misc_feature order(179922..179933,179937..179945)
/locus_tag="CD196_0146"
/note="P-loop; other site"
/db_xref="CDD:99910"
misc_feature order(179922..179924,179928..179933,179940..179945)
/locus_tag="CD196_0146"
/note="active site"
/db_xref="CDD:99910"
misc_feature 179922..179924
/locus_tag="CD196_0146"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99910"
misc_feature 180210..180608
/locus_tag="CD196_0146"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cd00211"
/db_xref="CDD:29266"
misc_feature order(180327..180329,180375..180377)
/locus_tag="CD196_0146"
/note="active site"
/db_xref="CDD:29266"
misc_feature 180375..180377
/locus_tag="CD196_0146"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29266"
gene 180755..181063
/locus_tag="CD196_0147"
/db_xref="GeneID:8463345"
CDS 180755..181063
/locus_tag="CD196_0147"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIA"
/protein_id="YP_003213198.1"
/db_xref="GI:260681913"
/db_xref="GeneID:8463345"
/translation="MEEIVLKIIIHAGNAKSMLYEALDYAKENDFKKADELIENANEE
ILKAHKVQTELIQKEAGGDKSDISILLIHSQDHLMTCMSERNLIKEMIMLRKEIQKLK
"
misc_feature 180755..181045
/locus_tag="CD196_0147"
/note="PTS_IIA, PTS system, lactose/cellobiose specific
IIA subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_lac;
cd00215"
/db_xref="CDD:29270"
misc_feature order(180755..180757,180917..180919,180965..180970,
180989..180991)
/locus_tag="CD196_0147"
/note="methionine cluster; other site"
/db_xref="CDD:29270"
misc_feature order(180800..180802,180971..180973,180977..180985)
/locus_tag="CD196_0147"
/note="active site"
/db_xref="CDD:29270"
misc_feature 180971..180973
/locus_tag="CD196_0147"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29270"
misc_feature 180980..180982
/locus_tag="CD196_0147"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:29270"
gene 181088..181414
/locus_tag="CD196_0148"
/db_xref="GeneID:8463346"
CDS 181088..181414
/locus_tag="CD196_0148"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIB"
/protein_id="YP_003213199.1"
/db_xref="GI:260681914"
/db_xref="GeneID:8463346"
/translation="MKRKVYLFCSFGMSTSLLADKMQKVADEHNLPIEVEAFPIAEID
KIVEEKNPDCILLGPQVKYMLKELKPKFEAQGKLIDIINEVDYGTMNGEKVLKLAIKL
IKSKQA"
misc_feature 181097..181390
/locus_tag="CD196_0148"
/note="PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme
II (EII) of the N,N-diacetylchitobiose-specific and
lichenan-specific phosphoenolpyruvate:carbohydrate
phosphotransferase system (PTS). In these systems, EII is
either a lichenan- or an N; Region:
PTS_IIB_chitobiose_lichenan; cd05564"
/db_xref="CDD:99906"
misc_feature order(181112..181114,181118..181123,181127..181132,
181265..181267,181346..181348)
/locus_tag="CD196_0148"
/note="active site"
/db_xref="CDD:99906"
misc_feature 181112..181132
/locus_tag="CD196_0148"
/note="P-loop; other site"
/db_xref="CDD:99906"
misc_feature 181112..181114
/locus_tag="CD196_0148"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99906"
gene 181453..182787
/locus_tag="CD196_0149"
/db_xref="GeneID:8463347"
CDS 181453..182787
/locus_tag="CD196_0149"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIC"
/protein_id="YP_003213200.1"
/db_xref="GI:260681915"
/db_xref="GeneID:8463347"
/translation="MNRLERILMPLAEKIGKNKLLIAIRDGFLISSPLLIIGSLFLLV
ANFPIKGWNEFVGQIFGPDWAVKLQQPTVATFEVMTLLAVLGIGYSYAKQIDVDPIAS
AAVAIVAFFIVTPFVIPYTPEGTESVYMVTGIPLGWMGSKGMFVGMITAITSVKLFAA
VVKKGWTLKMPDGVPPTVSKSFAALIPSAIVMVVFFLVKIAFEATPYGSIHEFIFKFL
QMPLLKLGNSLGAMAIAYIFLHLFWFFGINGSSVVGAVYNPILKILSAENLAAFQAGS
KIPNIITGQFQDMFATFGGAGSTLSLVIAMLLICKSKRIKSMGKLSILPGIFGINEPL
IFGLPIMLNPILLIPFAIVPTINIIIAYFCMSAGLVPLTNGVQLPWTTPIIFSGFLTT
GWQGAVLQLVLLILGIFMYIPFIKMLDKQYLREENETVEEEDDDISFDDLVL"
misc_feature 181462..182724
/locus_tag="CD196_0149"
/note="Phosphotransferase system cellobiose-specific
component IIC [Carbohydrate transport and metabolism];
Region: CelB; COG1455"
/db_xref="CDD:31644"
misc_feature 181474..182724
/locus_tag="CD196_0149"
/note="Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
transport and metabolism]; Region: PtsG; cl00557"
/db_xref="CDD:214082"
gene 182798..183316
/locus_tag="CD196_0150"
/db_xref="GeneID:8463348"
CDS 182798..183316
/locus_tag="CD196_0150"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213201.1"
/db_xref="GI:260681916"
/db_xref="GeneID:8463348"
/translation="MKKIVMILDQIQAGAGGKEKSNIPPAGKSSPLGPGVMMEQFLNE
SKVIATLFCGDEFFVNNEKEVTSKMIAMVKKLNPDVVICGPSFNYENFSKMSAILSKN
INDKTDIPAFAAMSEENIDVINEYKNDICIVKTPKKGGIGLNDSLNNICKLAKAIANK
EDITLMKEEFCY"
misc_feature 182804..>183304
/locus_tag="CD196_0150"
/note="glycine reductase, selenoprotein B; Region:
gly_red_sel_B; TIGR01917"
/db_xref="CDD:130972"
gene 183412..184371
/locus_tag="CD196_0151"
/db_xref="GeneID:8463349"
CDS 183412..184371
/locus_tag="CD196_0151"
/codon_start=1
/transl_table=11
/product="glycosylasparaginase"
/protein_id="YP_003213202.1"
/db_xref="GI:260681917"
/db_xref="GeneID:8463349"
/translation="MWGMIATWRMALEGITEASEHLEKGMEAGDAVELAVRRVEDYPF
YKSVGYGGLPNENCEVELDAAFMDGNTLDIGAVAGIRDYSNPVSIARKLSYEKVNNFL
VGIGAEDYAHKNGFERKNMLTDRAKLHYKKRKKETLDKGLSPYAGHDTVGMISLDKTG
KMCAATSTSGLFMKKRGRIGDSALSGSGFYVDSSIGGATATGLGEDLMKGCISYEIVR
LMKEGKHPQEACDIAVNELDKQLIKRRGKAGDLSLVAMNNKGEWGVATNIVDFTFSVV
TKEESPAVYISNRVDGKTIHKVISNEWMEAYEARIKAPIEVSE"
misc_feature 183418..184236
/locus_tag="CD196_0151"
/note="Glycosylasparaginase catalyzes the hydrolysis of
the glycosylamide bond of asparagine-linked glycoproteins.
This enzyme is an amidase located inside lysosomes.
Mutation of this gene in humans causes a genetic disorder
known as aspartylglycosaminuria (AGU)...; Region:
Glycosylasparaginase; cd04513"
/db_xref="CDD:72875"
misc_feature order(183433..183435,183853..183861,183913..183915,
183943..183945,184012..184014)
/locus_tag="CD196_0151"
/note="active site"
/db_xref="CDD:72875"
misc_feature order(183625..183633,183646..183648,183706..183720,
183724..183729,183736..183741,183937..183948,
183961..183969,183979..183981,184024..184026,
184033..184035,184051..184053,184063..184065,
184117..184119)
/locus_tag="CD196_0151"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:72875"
misc_feature 183859..183861
/locus_tag="CD196_0151"
/note="catalytic nucleophile [active]"
/db_xref="CDD:72875"
gene 184419..185471
/locus_tag="CD196_0152"
/db_xref="GeneID:8463350"
CDS 184419..185471
/locus_tag="CD196_0152"
/codon_start=1
/transl_table=11
/product="peptidase"
/protein_id="YP_003213203.1"
/db_xref="GI:260681918"
/db_xref="GeneID:8463350"
/translation="MNIISNKIDELKEDLLSDIIDIVKIPSVKGESENGFPFGEKVGE
ALNKALEISKKLGFKVRNLDNYIGYAEHGDSDDYVCVIGHVDVVHEGDGWKHQPYKGE
ETNGRIYGRGVLDNKGPIMSALYGLYAIKELNLKLDKRVRIIFGTNEESGFEDIPYYL
EKEKTPIMGFTPDCKYPVVYGEKGMAKIRIKSKINYEEDVYLGFIENMSENVLVTYKE
LNIENSNTILDIKVKYDFSYKLKDVLDEIKASFPNSIDIEVISNFNPVYFDKESNLVK
KLQLAYERVTSLDGTPVTTNGGTYAKVMPNIVPFGPSFPGQKGIAHNPDEYMDIEDII
LNAKIFANAIYELAKE"
misc_feature 184419..185468
/locus_tag="CD196_0152"
/note="Acetylornithine
deacetylase/Succinyl-diaminopimelate desuccinylase and
related deacylases [Amino acid transport and metabolism];
Region: ArgE; COG0624"
/db_xref="CDD:30969"
misc_feature 184437..>185036
/locus_tag="CD196_0152"
/note="Zinc peptidases M18, M20, M28, and M42; Region:
Zinc_peptidase_like; cl14876"
/db_xref="CDD:214231"
misc_feature order(184668..184670,184761..184763,184863..184868,
184935..184937)
/locus_tag="CD196_0152"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193495"
misc_feature <185073..185459
/locus_tag="CD196_0152"
/note="Zinc peptidases M18, M20, M28, and M42; Region:
Zinc_peptidase_like; cl14876"
/db_xref="CDD:214231"
gene 185474..186148
/locus_tag="CD196_0153"
/db_xref="GeneID:8463351"
CDS 185474..186148
/locus_tag="CD196_0153"
/codon_start=1
/transl_table=11
/product="copper homeostasis protein"
/protein_id="YP_003213204.1"
/db_xref="GI:260681919"
/db_xref="GeneID:8463351"
/translation="MLEIIGMSVEDAKIIEDCGADRIELVSALTEGGLTPSFGLIESV
VNSVKIPVNVMIRHHAKSFVYSKEDISIMQKDIGVVKEIGANGVVFGVLDKNNNIDEK
NLNVLLKCCDNLDVTFHRAIDESNTIDSVKILKDYDKITNILTSGGKGSIVDNIQMIK
NMMLSSNHIKILLGGGLNFNNIEKIKELTKASNFHFGTAIRINNSPFEDIDRQKLKQL
VNIISR"
misc_feature 185474..186082
/locus_tag="CD196_0153"
/note="Uncharacterized protein involved in copper
resistance [Inorganic ion transport and metabolism];
Region: CutC; COG3142"
/db_xref="CDD:32956"
gene 186701..187252
/locus_tag="CD196_0154"
/db_xref="GeneID:8463352"
CDS 186701..187252
/locus_tag="CD196_0154"
/codon_start=1
/transl_table=11
/product="RNA-binding protein"
/protein_id="YP_003213205.1"
/db_xref="GI:260681920"
/db_xref="GeneID:8463352"
/translation="MNIIISGKQIELTDAIKNKIETKLSKLDNYIHPDTDVKVTVSAR
KARQKIEVTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS
IRFQDSEINLADEQEDYGDENQELVIQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKN
IDSDEIAVVYKRNNGGYGIIEHE"
misc_feature 186704..186937
/locus_tag="CD196_0154"
/note="RaiA ('ribosome-associated inhibitor A', also known
as Protein Y (PY), YfiA, and SpotY, is a stress-response
protein that binds the ribosomal subunit interface and
arrests translation by interfering with aminoacyl-tRNA
binding to the ribosomal A site; Region: RaiA; cd00552"
/db_xref="CDD:29642"
misc_feature order(186710..186712,186716..186718,186722..186724,
186776..186778,186785..186787,186803..186808,
186818..186820,186830..186832,186857..186859,
186869..186880,186887..186889,186893..186895,
186902..186904,186908..186910,186917..186919)
/locus_tag="CD196_0154"
/note="30S subunit binding site; other site"
/db_xref="CDD:29642"
gene 187384..190059
/gene="secA1"
/locus_tag="CD196_0155"
/db_xref="GeneID:8463353"
CDS 187384..190059
/gene="secA1"
/locus_tag="CD196_0155"
/codon_start=1
/transl_table=11
/product="preprotein translocase SecA subunit"
/protein_id="YP_003213206.1"
/db_xref="GI:260681921"
/db_xref="GeneID:8463353"
/translation="MSFMDNLFNMADKKELKKFNKTVDIIDSLEPKFESMADSELKNM
TNIFKERLANGESIDDILPEAFAVVREVSKRVLGLRHYRVQMIGGIVLHQGRIAEMKT
GEGKTLVATAPVYLNALTGKGVHVVTVNDYLAKRDRDQMAKIYEFLGMSVGVIIHGQN
PKVRKEQYDCDITYGTNNEYGFDYLKDNMVIHKEQRVQRGLNYAIVDEVDSILIDEAR
TPLIISGPGDKSTHLYSDANTFVLTLKPDDYELEEKDKAVSLTASGIQKAEVYFNVDN
ITDISHTELYHHINQALRAHVIMKKDVDYVAKDGEIVIVDEFTGRLMFGRRYSEGLHQ
AIEAKEGLKIQRESKTLATVTFQNYFRMYKKLSGMTGTAKTEEEEFKAIYKMDVFQVP
TNKLMVREDLPDSVYKSEIGKFNAVAQEIIERHKVNQPILVGTVSIEKSELLSQILKK
KGIKHEVLNAKHHDKEAEIIAQAGRLGAVTIATNMAGRGTDIVLGGNPDFLTKREMRR
NGFKEEIVNRVDTPIEGIPVKGNEILFEAREEYEKLFEKFKQQTQEEQKQVVEAGGLA
IIGTERHESRRIDNQLRGRAGRQGDPGSSRFYIGLDDDLMRLFGSDRISGIVDKIGLE
EDMPIEHRILSKSIEGAQKKVEGKNFGIRKHVLQYDDVMNKQREIIYAERKRVLEGED
LQEQIQSMTHSIIEEAVTLYTQDKGFDEEGFKEHMYNLFLPKGSIEIPEIEKLNPVEI
TEKVYEIAMKIYTSKEEQVGYERMREVERVILLQAVDNHWIDHIDAMDQLRQGIGLRA
VGQQDPVIAYKMEGFDMFDEMNKHIKEDTVRYLFNITIETPVERKAVVDVENLSSPSD
GTLPTSKTVKKDEKVGRNDLCPCGSGKKYKNCCGR"
misc_feature 187384..190056
/gene="secA1"
/locus_tag="CD196_0155"
/note="preprotein translocase subunit SecA; Reviewed;
Region: PRK12904"
/db_xref="CDD:183826"
misc_feature 187657..>188022
/gene="secA1"
/locus_tag="CD196_0155"
/note="DEAD/DEAH box helicase; Region: DEAD; pfam00270"
/db_xref="CDD:201124"
misc_feature 187690..187704
/gene="secA1"
/locus_tag="CD196_0155"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 188002..188013
/gene="secA1"
/locus_tag="CD196_0155"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature 188059..188394
/gene="secA1"
/locus_tag="CD196_0155"
/note="SecA preprotein cross-linking domain; Region:
SecA_PP_bind; smart00958"
/db_xref="CDD:198026"
misc_feature 188599..>188859
/gene="secA1"
/locus_tag="CD196_0155"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
misc_feature order(188689..188700,188758..188763,188830..188838)
/gene="secA1"
/locus_tag="CD196_0155"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature 190000..190056
/gene="secA1"
/locus_tag="CD196_0155"
/note="SEC-C motif; Region: SEC-C; pfam02810"
/db_xref="CDD:202406"
gene 190165..191181
/gene="prfB"
/locus_tag="CD196_0156"
/db_xref="GeneID:8466621"
CDS 190165..191181
/gene="prfB"
/locus_tag="CD196_0156"
/codon_start=1
/transl_table=11
/product="peptide chain release factor 2"
/protein_id="YP_003213207.1"
/db_xref="GI:260681922"
/db_xref="GeneID:8466621"
/translation="MKNIQINEEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLK
SLLEDIEVLIEIGLEEDDDSVERDIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSI
NAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYG
YLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPELDENIEVEINPSDLKIDTYRASG
AGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKDRAMRLLMAKLIELKELEQKEK
IEDIQGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYLKM
NKIV"
misc_feature 190174..191172
/gene="prfB"
/locus_tag="CD196_0156"
/note="peptide chain release factor 2; Validated; Region:
prfB; PRK00578"
/db_xref="CDD:179072"
misc_feature 190327..190659
/gene="prfB"
/locus_tag="CD196_0156"
/note="PCRF domain; Region: PCRF; pfam03462"
/db_xref="CDD:202648"
misc_feature 190747..191088
/gene="prfB"
/locus_tag="CD196_0156"
/note="RF-1 domain; Region: RF-1; pfam00472"
/db_xref="CDD:201249"
gene 191316..193466
/locus_tag="CD196_0157"
/db_xref="GeneID:8466459"
CDS 191316..193466
/locus_tag="CD196_0157"
/codon_start=1
/transl_table=11
/product="RNA-binding protein"
/protein_id="YP_003213208.1"
/db_xref="GI:260681923"
/db_xref="GeneID:8466459"
/translation="MNKLDINQILKKEFNLRDEQINNTLKLIDEGNTIPFIARYRKEM
TGEMSDVTLREFYEKLMYLRNLQSRKDDVVRLIDEQGKLTDEITQNIEKAKTLQEVED
IYAPYKQKKRTRATIAKEKGLENLALSILENNLDNIEIEAKNYLDEEKEVLSIEDALK
GARDIIAELVSDDAKIRKYIRELALREGMIVSKSATDEKSVYDMYYDYNEAVKSMAPH
RVLAINRGEKESFLKVKLEINNDKVLNYIINEYVNDKNFKNKEEIVSSIEDSYKRLIF
PSIEREIRNHLTEIAQERAISVFGKNVKSLLLQPPVKDKVVMGFDPAFRTGCKIAVVD
KNGKLLDYTTVYPTDPQNDVEGAKKVLKGLIEKYDIDIISIGNGTASRESETFVSEMI
KEIDSEVQYVIVSEAGASVYSASELANEEHPDINVSIRGAISIARRLQDPLAELVKID
PKSIGVGQYQHDLNKKRLEEVLDGVVEDSVNSVGVDLNTASYSLLEHVAGISKAIAKN
IIAYREENGDFTSRAQLKKVKRLGPQAFTQCAGFMRILEGKNPLDNTGVHPESYDICK
KMIEIIGYSLDDVKNKNIGEIDEKIKEIGLRELSEKLEVGQVTLKDIIAEIKKPGRDP
REEGIKPILRTDVLKIEDIQEGMTLKGTIRNVVDFGAFVDIGIKNDGLVHKSEMSNSF
VKDPMSIVTVGDIVDVKVIGIDLNKKRVALSMKK"
misc_feature 191325..193463
/locus_tag="CD196_0157"
/note="Transcriptional accessory protein [Transcription];
Region: Tex; COG2183"
/db_xref="CDD:32366"
misc_feature 191343..191912
/locus_tag="CD196_0157"
/note="Tex-like protein N-terminal domain; Region: Tex_N;
pfam09371"
/db_xref="CDD:150144"
misc_feature 192258..192554
/locus_tag="CD196_0157"
/note="Likely ribonuclease with RNase H fold; Region:
YqgFc; smart00732"
/db_xref="CDD:128971"
misc_feature 193251..193454
/locus_tag="CD196_0157"
/note="S1_like: Ribosomal protein S1-like RNA-binding
domain. Found in a wide variety of RNA-associated
proteins. Originally identified in S1 ribosomal protein.
This superfamily also contains the Cold Shock Domain
(CSD), which is a homolog of the S1 domain; Region:
S1_like; cl09927"
/db_xref="CDD:209094"
misc_feature order(193275..193277,193299..193301,193329..193331,
193335..193337)
/locus_tag="CD196_0157"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88416"
gene 193614..194780
/locus_tag="CD196_0158"
/db_xref="GeneID:8463354"
CDS 193614..194780
/locus_tag="CD196_0158"
/codon_start=1
/transl_table=11
/product="amidohydrolase"
/protein_id="YP_003213209.1"
/db_xref="GI:260681924"
/db_xref="GeneID:8463354"
/translation="MIFIKNGKINTITNGIIHGDILIDEGKIIEIGEDLIAPLDVEVI
DASNKLVFPGFIDAHTHLGLWEDGIGFEGADGNEETDPITPQLNPIDGINPMDRTFKE
AFEGGITSVCTTPGSANVMGGQCIAIKTCGKRIDKMVIKNPVASKIAFGENPKSCYGQ
DDKSPQTRMAIAALLRENLKKAEEYLEDIDMYESHDDEDCEKPEYDIKMESLIPVLRR
EIPFKAHAHRADDMFTAIRIAKEFNLKLTLDHCTEGHLIVDELVEEGFPVIVGPSLSE
RSKFELRNLTFNTAGILSNAGLDVCIMTDHPVIPVQYLPICAGIAVKHGMKEEKAIES
ITINPAKTLGIEDRVGSIEVGKDADLVIWDNSPLEIQSNVLYTIINGKVVYEKK"
misc_feature 193725..194768
/locus_tag="CD196_0158"
/note="Metallo-dependent hydrolases, subgroup C is part of
the superfamily of metallo-dependent hydrolases, a large
group of proteins that show conservation in their
3-dimensional fold (TIM barrel) and in details of their
active site. The vast majority of the...; Region:
Met_dep_hydrolase_C; cd01309"
/db_xref="CDD:30052"
misc_feature 193746..194696
/locus_tag="CD196_0158"
/note="Amidohydrolase; Region: Amidohydro_4; pfam13147"
/db_xref="CDD:205328"
misc_feature order(193788..193790,193794..193796,194286..194288,
194361..194363,194526..194528)
/locus_tag="CD196_0158"
/note="active site"
/db_xref="CDD:30052"
gene 195082..195687
/locus_tag="CD196_0159"
/db_xref="GeneID:8463355"
CDS 195082..195687
/locus_tag="CD196_0159"
/codon_start=1
/transl_table=11
/product="riboflavin transporter"
/protein_id="YP_003213210.1"
/db_xref="GI:260681925"
/db_xref="GeneID:8463355"
/translation="MQNTAKRGNMISTRTLVVMSILSAISYLLMFIQAPIPGIFPDFL
KIDLSDIPAIFGGMSLGPLVGFGIVVVKNVLQAITATTTGGIGEFANILIGGSYVMIL
CYSYKRSGDLKGVLIGFVLGTISMTIIGSLVNYFVMLPLYGQLMGLDAIIGLGSAINP
QVHDLFTFVIWMIAPFNVLKAVIISLVTLPLYKKMGNIIKK"
misc_feature 195109..195684
/locus_tag="CD196_0159"
/note="ECF-type riboflavin transporter, S component;
Region: ECF-ribofla_trS; cl01942"
/db_xref="CDD:211450"
misc_feature 195121..195657
/locus_tag="CD196_0159"
/note="Protein of unknown function (DUF3816); Region:
DUF3816; pfam12822"
/db_xref="CDD:205090"
gene 196016..197056
/locus_tag="CD196_0160"
/db_xref="GeneID:8463356"
CDS 196016..197056
/locus_tag="CD196_0160"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213211.1"
/db_xref="GI:260681926"
/db_xref="GeneID:8463356"
/translation="MHLSKKIKKLFLDDKGYYFNSNWEDIHIGIYDTKLGDSLKYITN
EYIENMERVKYDYRELKNIENQTDGMCILAIRQNYKALEYVKNQTEELCLEAIKYNYK
ALEYVKEQTEYLCLEAIKKDCNALKYVRNKTEGLIIKAISHSSNIDVVSILKALETQT
RRICLEAIKKDGRCLAYVREQSEELCIEAIKQNYKALKYVKNQTEKMCIESVRQNGMA
LQYVNKQTDKICIEAVKQDGRSLQFVNNKTEEICINAIRYLNKKYNIKDVLSYIDKYT
EDICIEIVRQNGKMLMYIKNQTEKMCIEAVKENYKSLKYVKEQSERICKEALKQNHKA
KEYVKIAIDDCI"
misc_feature 196283..196411
/locus_tag="CD196_0160"
/note="Domain of unknown function (DUF4116); Region:
DUF4116; pfam13475"
/db_xref="CDD:205653"
misc_feature 196496..196621
/locus_tag="CD196_0160"
/note="Domain of unknown function (DUF4116); Region:
DUF4116; pfam13475"
/db_xref="CDD:205653"
misc_feature 196562..196687
/locus_tag="CD196_0160"
/note="Domain of unknown function (DUF4116); Region:
DUF4116; pfam13475"
/db_xref="CDD:205653"
misc_feature 196628..196756
/locus_tag="CD196_0160"
/note="Domain of unknown function (DUF4116); Region:
DUF4116; pfam13475"
/db_xref="CDD:205653"
gene 197195..197647
/locus_tag="CD196_0161"
/db_xref="GeneID:8463357"
CDS 197195..197647
/locus_tag="CD196_0161"
/codon_start=1
/transl_table=11
/product="ATP/GTP hydrolase"
/protein_id="YP_003213212.1"
/db_xref="GI:260681927"
/db_xref="GeneID:8463357"
/translation="MAKIYLENENKTREIGYKLGKLLKEGSVICLVGDLGAGKTTMTQ
SLADSLGIEDYITSPTFTIINEYEGKIPLYHFDVYRIGSSDEMYDIGYDEYVNSNGIC
IIEWANLIEDILPKEYLNIELRYKDEGREMILTPKGEFYKEIVEELIK"
misc_feature 197201..197638
/locus_tag="CD196_0161"
/note="Predicted ATPase or kinase [General function
prediction only]; Region: COG0802"
/db_xref="CDD:31145"
gene 197662..198363
/locus_tag="CD196_0162"
/db_xref="GeneID:8463358"
CDS 197662..198363
/locus_tag="CD196_0162"
/codon_start=1
/transl_table=11
/product="glycoprotease"
/protein_id="YP_003213213.1"
/db_xref="GI:260681928"
/db_xref="GeneID:8463358"
/translation="MDTSSMAASVAVVEDDNLICEFTVNNKKTHSQKLMPMIENMLSM
SDLSIKDMDLLAVCIGPGSFTGLRIGMATVKAMAHVNNIPIIAVNSLESLANNINFCD
RKICCILDAQKNQVYSAKYKFENGEMIELDGVDVVEFDALVDEIVSTNEEFIIVGEAV
YKYKDKLENIKNIKIPSPANNVSNAGSLCSLALNKYNKNIDVHTCYTINPMYIRKSQA
EVQYDEKMKRLNNGR"
misc_feature 197662..198303
/locus_tag="CD196_0162"
/note="universal bacterial protein YeaZ; Region:
bact_YeaZ; TIGR03725"
/db_xref="CDD:211869"
misc_feature 197743..>198258
/locus_tag="CD196_0162"
/note="Glycoprotease family; Region: Peptidase_M22;
pfam00814"
/db_xref="CDD:201456"
gene 198401..198829
/gene="rimI"
/locus_tag="CD196_0163"
/db_xref="GeneID:8463359"
CDS 198401..198829
/gene="rimI"
/locus_tag="CD196_0163"
/codon_start=1
/transl_table=11
/product="ribosomal-protein-alanine acetyltransferase"
/protein_id="YP_003213214.1"
/db_xref="GI:260681929"
/db_xref="GeneID:8463359"
/translation="MTTEDIDEVFEVEKNCFEDYWSKESFRKELSNEVARYIVAKLNG
KIVGYVGIWLILDEGHINNVAVHSDYRGKKIGDKLIKCIVDLCKDNNIASMTLEVRAS
NKIAQNLYRKYGFKMGGIRKEYYSDNKEDAIIMWNQLKEV"
misc_feature 198413..198805
/gene="rimI"
/locus_tag="CD196_0163"
/note="ribosomal-protein-alanine acetyltransferase;
Region: rimI; TIGR01575"
/db_xref="CDD:162430"
misc_feature 198509..198694
/gene="rimI"
/locus_tag="CD196_0163"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(198590..198598,198626..198631)
/gene="rimI"
/locus_tag="CD196_0163"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 198835..199851
/gene="gcp"
/locus_tag="CD196_0164"
/db_xref="GeneID:8466528"
CDS 198835..199851
/gene="gcp"
/locus_tag="CD196_0164"
/note="in most organisms, only the N-terminal domain is
present in a single polypeptide; in some archaea this
domain is fused to a kinase domain; this gene is essential
for growth in Escherichia coli and Bacillus subtilis; the
secreted glycoprotease from Pasteurella haemolytica showed
specificity for O-sialoglycosylated proteins; the
Pyrococcus structure shows DNA-binding properties,
iron-binding, ATP-binding, and AP endonuclease activity"
/codon_start=1
/transl_table=11
/product="DNA-binding/iron metalloprotein/AP endonuclease"
/protein_id="YP_003213215.1"
/db_xref="GI:260681930"
/db_xref="GeneID:8466528"
/translation="MSDIITLAIESSCDETAASVLKNGREVLSNIISTQIETHKKFGG
VVPEVASRKHVENIDIVVQEALDKANIGFNDIDHIAVTYGPGLVGALLVGLSYAKALA
YTLNIPLVGVNHIEGHLSANYIEHKDLKPPFITLIVSGGHTHLVEVKDYGKYEILGKT
RDDASGEAFDKISRAMNLGYPGGPIIDNLAKNGNKHAIEFPRAYLEEDSYDFSFSGLK
SSVLNYLNGKRMKNEEIVVEDVAASFQEAVVEVLSNKALKAVKDKGYNIITLSGGVAS
NSGLRAKITELAKDNGITVKYPPLILCTDNAAMIGCAGYYNFINGKTHDMSLNAVPNL
KINQ"
misc_feature 198844..199842
/gene="gcp"
/locus_tag="CD196_0164"
/note="UGMP family protein; Validated; Region: PRK09604"
/db_xref="CDD:181984"
misc_feature 198850..>199173
/gene="gcp"
/locus_tag="CD196_0164"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:214262"
gene 200148..202856
/gene="hpdB"
/locus_tag="CD196_0165"
/db_xref="GeneID:8466151"
CDS 200148..202856
/gene="hpdB"
/locus_tag="CD196_0165"
/codon_start=1
/transl_table=11
/product="4-hydroxyphenylacetate decarboxylase catalytic
subunit"
/protein_id="YP_003213216.1"
/db_xref="GI:260681931"
/db_xref="GeneID:8466151"
/translation="MSQSKEDKIRSILEAKNIKSNFQNKENLSEFNEKKASKRAEDLL
DVYYNTLSTADMEFPYWYNREYRKSDGDIPVVRRAKALKAAFSHMTPNIIPGEKIVMQ
KTRHYRGSFPMPWVSESFFVAQGEQMREEAKKLASNTADELTKFGSGGGNVTESFGNV
VSIAGKFGMRKEEVPVLVKMAKEWVGKSVEDLGFHYEKMMPDYDLKENLMSTLICMFD
SGYTLPQGREVINYFYPLNYGLDGIIEMAKECKKAVAGNASGDGLIGMDRLYFYEAVI
QVIEGLQTWILNYAKHAKYLESIETDLEAKKEYSDLVEILEHIAHKQPRTFREALQLT
YTIHIASVNEDAISGMSIGRFGQILYPWYEQDIEKGLITKEEVIELLELYRIKITCID
CFASAGVNGGVLSGNTFNTLSIGGLKEDGSTGANELEELLLEASMRCRTPQPSLTMLY
DEKLPEDFLMKAAECTKLGSGYPAWVNNSNGTTFMMKQFADEGMTVEEARAFALGGCL
ETSPGCWKQLTLNGKTYSIAGGAGQSAGSGVHFIANPKILELVLMNGKDHRMNIQVFE
PHNKPLDTYEEVIEVFKDYYKQAINVLERANNIELDIWRKFDTSIINSLLKPDCLDKG
QHIGNMGYRYNATLNVETCGTVTMVNSFAALKKLVYDDKAFTIEEMKDAILNNFGFKD
ALEVGNYSMADQVKVDKTGKYDAIYKACLDAPKYGNNDLYADNILKNYEVWLSKVCEE
AQSLYAKKMYPCQISVSTHGPQGAATLATPDGRLSGTTYSDGSVSAYAGTDKNGVYAL
FESATIWDQAVVQNSQMNLKLHPTTIKGQQGTKKLLDLTRSYLRKGGFHIQYNVVDSE
TLKDAQKNPDNYRQLMVRVAGFTQYWCELGKPIQDEVIARTEYEGV"
misc_feature 200331..202844
/gene="hpdB"
/locus_tag="CD196_0165"
/note="glycyl radical enzyme, PFL2/glycerol dehydratase
family; Region: PFL2-3; TIGR01774"
/db_xref="CDD:162527"
misc_feature 200373..202841
/gene="hpdB"
/locus_tag="CD196_0165"
/note="Pyruvate formate lyase 2 and related enzymes;
Region: PFL2_DhaB_BssA; cd01677"
/db_xref="CDD:153086"
misc_feature order(200490..200498,200517..200519,200733..200741,
200751..200756,200763..200774,200943..200948,
200952..200957,201939..201941,201951..201953,
201966..201968,202365..202373,202377..202379)
/gene="hpdB"
/locus_tag="CD196_0165"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153086"
misc_feature order(200826..200828,201189..201194,201354..201356,
201372..201374,201663..201668,201672..201674,
201759..201761,202407..202409,202413..202415)
/gene="hpdB"
/locus_tag="CD196_0165"
/note="active site"
/db_xref="CDD:153086"
misc_feature 202767..202781
/gene="hpdB"
/locus_tag="CD196_0165"
/note="glycine loop; other site"
/db_xref="CDD:153086"
gene 202860..203117
/gene="hpdC"
/locus_tag="CD196_0166"
/db_xref="GeneID:8466235"
CDS 202860..203117
/gene="hpdC"
/locus_tag="CD196_0166"
/codon_start=1
/transl_table=11
/product="4-hydroxyphenylacetate decarboxylase regulatory
subunit"
/protein_id="YP_003213217.1"
/db_xref="GI:260681932"
/db_xref="GeneID:8466235"
/translation="MRKHSDCMNFCAVDATKGICRLSKQMINLDDSACPEIKVMPKCK
NCKNFVEANDEGIGKCVGLEKEDWVYSTLNAITCEGHVFNE"
gene 203080..204060
/gene="hpdA"
/locus_tag="CD196_0167"
/db_xref="GeneID:8466236"
CDS 203080..204060
/gene="hpdA"
/locus_tag="CD196_0167"
/codon_start=1
/transl_table=11
/product="4-hydroxyphenylacetate decarboxylase activating
subunit"
/protein_id="YP_003213218.1"
/db_xref="GI:260681933"
/db_xref="GeneID:8466236"
/translation="MQLLVKDMCLMSSQKQLEGMIFDVQSFSVHDGPGCRTTVFLNGC
PLSCKWCANPESWTVRPHMMFSELSCQYENGCTVCHGKCKNGALSFNLDNKPVIDWNI
CKDCESFECVNSCYYNAFKLCAKPYTVDELVQVIKRDSNNWRSNGGVTFSGGEPLLQH
EFLHEVLLKCHEVNIHTAIETSACVSNEVFNKIFKDIDFAFIDIKHMDREKHKEQTGV
YNDLILENISNLANSDWNGRLVLRVPVISGFNDSAENISDIISFMHKNNLIEINLLPF
HRLGESKWIQLGKEYEYSDKGDIDEEHLEELQDIFLDNGIACYVGHETAF"
misc_feature 203140..204024
/gene="hpdA"
/locus_tag="CD196_0167"
/note="glycyl-radical enzyme activating protein family;
Region: PFLE_PFLC; TIGR02494"
/db_xref="CDD:162887"
misc_feature 203164..>203280
/gene="hpdA"
/locus_tag="CD196_0167"
/note="anaerobic ribonucleotide reductase-activating
protein; Provisional; Region: nrdG; cl15804"
/db_xref="CDD:212386"
gene 204380..205342
/locus_tag="CD196_0168"
/db_xref="GeneID:8466234"
CDS 204380..205342
/locus_tag="CD196_0168"
/codon_start=1
/transl_table=11
/product="membrane-associated CAAX amino terminal
protease"
/protein_id="YP_003213219.1"
/db_xref="GI:260681934"
/db_xref="GeneID:8466234"
/translation="MNKSWSNLIIKNKDKKVRSGWIIITVMAAFYIFEYYLSTILMEI
IRKILIATGDINLKTNYFSEYANWLNDVGLQVVFQILTDSLMIIIPIIVWRFIMKNPI
SEMGLHSYRIKKKEGYVGMLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILV
FILVAFAEEILNRGFFMAVLRRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIII
GILFSYMFIKSSNIWMCIGYHFTWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGG
MFGIEGGILTTFVNLLSFIFVWYYYRDSKYDFVSDKVNVTNIKN"
misc_feature 204830..205114
/locus_tag="CD196_0168"
/note="CAAX protease self-immunity; Region: Abi;
pfam02517"
/db_xref="CDD:202269"
gene complement(205441..206421)
/locus_tag="CD196_0169"
/db_xref="GeneID:8463360"
CDS complement(205441..206421)
/locus_tag="CD196_0169"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213220.1"
/db_xref="GI:260681935"
/db_xref="GeneID:8463360"
/translation="MNLKLIWINILNPVFIKNEIKRKKIQIIIFFFINFGLTYSLGLL
LYYNKFIDPENFASFMMILPLSSVAIAKFYTEGLNNDMYEFYSLIILFFLIYSLLIVL
KLLNLINNNEFIIINLILTFISSLSIIIYSSNKKNLYPVKNIKLGSLLIIYFMISVIV
PTSFILILQGAQPNYSGIIKFIFTPITSLTTIYIFFSEEYAWRGFLQNIFFDKFGKKL
GVIILGMCWSLWHLPLIFTLYTPEAPILGVILRSIHIVGISIFLGYLYIKTKNIWFCA
IIHVLNNSAFLITNSKESTITYHDILIVSMVVLIFYVPFLFTKEYKNNLE"
misc_feature complement(205573..205857)
/locus_tag="CD196_0169"
/note="CAAX protease self-immunity; Region: Abi;
pfam02517"
/db_xref="CDD:202269"
gene 207549..208016
/locus_tag="CD196_0170"
/db_xref="GeneID:8463361"
CDS 207549..208016
/locus_tag="CD196_0170"
/codon_start=1
/transl_table=11
/product="glyoxalase"
/protein_id="YP_003213221.1"
/db_xref="GI:260681936"
/db_xref="GeneID:8463361"
/translation="MKFLNVLIVVEDIEKSKKFYYDILGLKVICDFGENVVLEGNISL
QEKKLWLEFINKSDSEVKFNGNDAELYFEEDNFDTFVERLSTMKGIDYVHLAIEHRWG
QRAIRFYDLDGHIIEIGETMSSVCRRFLDSGLSIDEVAKRMDVTVEYIESVLE"
misc_feature 207549..207914
/locus_tag="CD196_0170"
/note="This domain superfamily is found in a variety of
structurally related metalloproteins, including the type I
extradiol dioxygenases, glyoxalase I and a group of
antibiotic resistance proteins; Region: Glo_EDI_BRP_like;
cl14632"
/db_xref="CDD:214225"
misc_feature order(207561..207563,207573..207575,207651..207653,
207675..207677,207681..207683,207753..207755,
207867..207869,207891..207893,207897..207899)
/locus_tag="CD196_0170"
/note="active site"
/db_xref="CDD:211348"
misc_feature order(207561..207563,207753..207755,207897..207899)
/locus_tag="CD196_0170"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:211348"
misc_feature 207564..207902
/locus_tag="CD196_0170"
/note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily; Region: Glyoxalase; pfam00903"
/db_xref="CDD:201499"
gene 209188..209901
/locus_tag="CD196_0171"
/db_xref="GeneID:8463362"
CDS 209188..209901
/locus_tag="CD196_0171"
/codon_start=1
/transl_table=11
/product="two-component response regulator"
/protein_id="YP_003213222.1"
/db_xref="GI:260681937"
/db_xref="GeneID:8463362"
/translation="MINIIICEGKKSERVILNDYINTFFYNYNFEYNIKEFENGGDLL
KKYPNNVDIIFMDIDLNDENGFNVSKEIKKFDESVRIIFVSSSNKYIKKGYEIGVYRY
LEKPLKYSLFKEAISSYLKECYKNEAILSIKCKCKIYFIKVDDILYLEVLKNDLTIHT
EKGIYTFKNSMKEIESNLEEHNFFRCHKSYLINLMKVNMLDIENNIVFINQNSIIVSR
YKIKLLREKLNSCLVDVII"
misc_feature 209329..209874
/locus_tag="CD196_0171"
/note="Response regulator of the LytR/AlgR family
[Transcription / Signal transduction mechanisms]; Region:
LytT; COG3279"
/db_xref="CDD:33090"
misc_feature <209332..209547
/locus_tag="CD196_0171"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(209356..209358,209380..209382,209440..209442,
209491..209493,209500..209505)
/locus_tag="CD196_0171"
/note="active site"
/db_xref="CDD:29071"
misc_feature 209356..209358
/locus_tag="CD196_0171"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(209365..209370,209374..209382)
/locus_tag="CD196_0171"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 209500..209508
/locus_tag="CD196_0171"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 209596..209868
/locus_tag="CD196_0171"
/note="LytTr DNA-binding domain; Region: LytTR;
smart00850"
/db_xref="CDD:197918"
gene 210174..211946
/locus_tag="CD196_0172"
/db_xref="GeneID:8463363"
CDS 210174..211946
/locus_tag="CD196_0172"
/codon_start=1
/transl_table=11
/product="lantibiotic ABC transporter ATP-binding protein"
/protein_id="YP_003213223.1"
/db_xref="GI:260681938"
/db_xref="GeneID:8463363"
/translation="MENGKFQFFKGVRNCFNMIYLHDKRYLFISMFMAIFQGIVPSIS
LLVSQNIINNMQTFSKSVKEILVLLIMYLIINIIPSIFQSFYGYYRIKFNKNFEKHIE
TMMLEKSLTLSLKDFEDDNTYDMINRAQSQKGFNITILSENLISIIRESVSTLSLIVV
LSQFQLWLIIVVIVIPVLKSLYSIKLGKEQYDVSVNRTWKERKAWYIDYLLSKGYAYK
EIMVFRIGSKLINHYKKLKEDIISQDMNIAKKNFIATLLCTVLDSIVSAGIIGFIIIQ
GILKKILIGDATTYIQAVQSIKDNVESIFSLFSSVIQDLFYTDLLFKFLDYNCKEDSI
EHIKIFEKIGDINKIELINISYKYNHSSEYSLKNINLTLNKNDPIAILGKNGSGKTTL
LKILLGFYDDYEGDILINGKNLKDIEKDEYIRKVSCMFQDYIKYEATLKENVAMGDVY
KSNLEEKVKSKLKETKLKPSIYEEDGLETILGTWFGKKQLSMGEWQKVAISRTLMKDA
DMYIFDEPDSSLDSEAGNELLSLYKKTFENKIGIFITHHIQHAKKITNNIVVLENGKL
LESGRHDELMDKKGVYFNLFCNCK"
misc_feature 210246..211934
/locus_tag="CD196_0172"
/note="ABC-type multidrug transport system, ATPase and
permease components [Defense mechanisms]; Region: MdlB;
COG1132"
/db_xref="CDD:31327"
misc_feature 211218..211868
/locus_tag="CD196_0172"
/note="ATP-binding cassette domain of multidrug resistance
protein-like transporters; Region: ABCC_MRP_Like; cd03228"
/db_xref="CDD:213195"
misc_feature 211320..211343
/locus_tag="CD196_0172"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213195"
misc_feature order(211329..211334,211338..211346,211464..211466,
211713..211718,211809..211811)
/locus_tag="CD196_0172"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213195"
misc_feature 211455..211466
/locus_tag="CD196_0172"
/note="Q-loop/lid; other site"
/db_xref="CDD:213195"
misc_feature 211641..211670
/locus_tag="CD196_0172"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213195"
misc_feature 211701..211718
/locus_tag="CD196_0172"
/note="Walker B; other site"
/db_xref="CDD:213195"
misc_feature 211725..211736
/locus_tag="CD196_0172"
/note="D-loop; other site"
/db_xref="CDD:213195"
misc_feature 211797..211817
/locus_tag="CD196_0172"
/note="H-loop/switch region; other site"
/db_xref="CDD:213195"
gene 211968..213389
/locus_tag="CD196_0173"
/db_xref="GeneID:8463364"
CDS 211968..213389
/locus_tag="CD196_0173"
/codon_start=1
/transl_table=11
/product="radical SAM protein"
/protein_id="YP_003213224.1"
/db_xref="GI:260681939"
/db_xref="GeneID:8463364"
/translation="MNQKPFIHTFKAGKSYFIYDVNTDKILKVNAAVYNYLNKIEHNL
EKESDWNIEIEDEINTLINYGFLKNKRVNKTMHPETKYIKYHIENNLSSIILQVTQNC
NLRCDYCIYSGSYSNRVHTNKRMNIDVAKRSIDYLIKNSSQLNEVSVGFYGGEPLLEF
DLIKQIVEYVKVVGEGKEIYFNLTTNATLFNEEIIEFFVKNNITTMISLDGGKEIHDK
SRKFANTGEGSHDVVLKNVRYIKNKYPEYYKKNITFNTVINSENDYISIDDFISKNET
LKDSNFLASTLNNNYSDKEIVSSDEYILGKSYDRFLTLLNKLKFIKDESMSPLSRIER
ALLDDFRYEKNIEGRLELPDVWHHGGPCIPGAFRIFVTTDGEFFPCERVSESSKMGMI
GNLDSGVDIEKAEKLLNIGKLYEEQCSDCWAYSYCDICIAKIDDTKCNENEIKPHDCD
RIRHSTENNMKDYCVLKSLGYQY"
misc_feature 211983..213383
/locus_tag="CD196_0173"
/note="Cys-rich peptide radical SAM maturase CcpM; Region:
rSAM_ocin_clost; TIGR04068"
/db_xref="CDD:188583"
misc_feature 212253..>212780
/locus_tag="CD196_0173"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature order(212271..212273,212277..212279,212283..212285,
212289..212297,212421..212423,212427..212432,
212517..212525,212589..212591,212733..212735)
/locus_tag="CD196_0173"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene 213418..214488
/locus_tag="CD196_0174"
/db_xref="GeneID:8463365"
CDS 213418..214488
/locus_tag="CD196_0174"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213225.1"
/db_xref="GI:260681940"
/db_xref="GeneID:8463365"
/translation="MEKVLIYPFNYNFFTILNHCNKISDIEINSLVSPSGWGLCNKEY
NVNNIITKVTNDFQSELKKNSLVWFVDSKENLDLEKFIIPKLKVALKEGKKILYTRDD
LNKISRYISHYEFKKINEWNLEKYEIRDIEGISQINTPIIFICGLYGGLDTFDVNIRI
GEELRKRGFSILQFGPKKESYLFKMIPIPEFMFDDSISSKTKIINFNHFIKDKEVEAK
PDLIIIEVPGELFPFSRKMVGNFGIRAFEISNAVINDCGILCIPSSIYDREYCEELKY
FIKGRHGINIDYFSIEKKVIDTYETEVKQKFSYMSLDENFFVEDIEDYEKTFFIHDNK
QLLELVDNIVNQLKEYAKVISI"
misc_feature 213421..214464
/locus_tag="CD196_0174"
/note="peptide maturation system protein, TIGR04066
family; Region: nat_prod_clost"
/db_xref="CDD:188581"
gene 214504..214755
/locus_tag="CD196_0175"
/db_xref="GeneID:8463366"
CDS 214504..214755
/locus_tag="CD196_0175"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213226.1"
/db_xref="GI:260681941"
/db_xref="GeneID:8463366"
/translation="MNYTEKELLLENIFFDVTGINFNKNNNLKKELFFSPSLHIQPRE
LLLVFCEVIENFNIKIPEEKLLNRQFTSFDNVLKIINMV"
misc_feature 214516..214743
/locus_tag="CD196_0175"
/note="peptide maturation system acyl carrier-related
protein; Region: ocin_ACP_rel; TIGR04069"
/db_xref="CDD:188584"
gene 214806..215009
/locus_tag="CD196_0176"
/db_xref="GeneID:8463367"
CDS 214806..215009
/locus_tag="CD196_0176"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213227.1"
/db_xref="GI:260681942"
/db_xref="GeneID:8463367"
/translation="MSFGKRIEMNNIGVETRGVCTIMCPYTCKMMASSSCNCKNNDYN
ARGGSYNTYYNKLIHGQRTPDGM"
gene 215493..215786
/locus_tag="CD196_0177"
/db_xref="GeneID:8463368"
CDS 215493..215786
/locus_tag="CD196_0177"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213228.1"
/db_xref="GI:260681943"
/db_xref="GeneID:8463368"
/translation="MISMIMMLIGVLFIVFGIILTAVEIKGKMPGFYGVGQNAVRKNA
IGIIAAGIALIFFRNGLDSIDSILTYGVFLVIELVVIGLYFLIRIKYDKDGNL"
gene complement(215918..217267)
/locus_tag="CD196_0178"
/db_xref="GeneID:8463369"
CDS complement(215918..217267)
/locus_tag="CD196_0178"
/codon_start=1
/transl_table=11
/product="amino acid transporter"
/protein_id="YP_003213229.1"
/db_xref="GI:260681944"
/db_xref="GeneID:8463369"
/translation="MEKAKKLGLFSMILLGINSIIGSGIFLLPGKVYSLAGQNSMFIY
IFATLLVLSILLCFAEVGSMFDKNGGAYLYSKKAFGDFIGFEVGTMSWFIRIISWSTL
AVGFATALGSFWPESATEYKGCIAAILVTLLSINSLFGIKSTKIMNNVITIAKLVPLI
VFVIVGIFFIKFVNIVPSGNVVNSSMGPAIILVFYAFTGFESFIVASGEMENPKKNLP
IALITTIFICAIIYILIQIVCMGILGDRLFENSIPIADASSVFLGNYGKVFISVATLI
SIFGINIGSSIVTPKCGSSLAEEGSLPAFIGKTNKYGAPYVAIIISLICCIPLVLTGS
FEQLAVMSVIARFAQYIPTCLSVIVLRKRTDVKASFKIPFGPVIPMVAILGSLWLLQQ
AWAEDISKPITQNRVLIGLGAMLLIAPLYIFMKKNKEIEHKNKSEDSKLYISREKIQ"
misc_feature complement(215957..217174)
/locus_tag="CD196_0178"
/note="Amino acid transporters [Amino acid transport and
metabolism]; Region: PotE; COG0531"
/db_xref="CDD:30877"
misc_feature complement(<216614..217171)
/locus_tag="CD196_0178"
/note="Spore germination protein; Region: Spore_permease;
cl15802"
/db_xref="CDD:210202"
gene complement(217304..218524)
/locus_tag="CD196_0179"
/db_xref="GeneID:8463370"
CDS complement(217304..218524)
/locus_tag="CD196_0179"
/codon_start=1
/transl_table=11
/product="amidohydrolase/peptidase"
/protein_id="YP_003213230.1"
/db_xref="GI:260681945"
/db_xref="GeneID:8463370"
/translation="MQQALKLKYQTKELGKDFVIESCNSIKPWLINIRRELHKIPELA
LEENLTKQKVISYLKEIGIDYMEFTKHNGIMAYILKESADKTICIRADMDALPIEEEN
NIPYKSIHSGKMHACGHDAHTTMLLGACKVLHSIKDKLNVNVKFLFQPAEEGFGGAKF
LVEDGCLENPKADYIFGLHVMPHIETGLIETKYDTLNASVDTIKISIKGKRAHGAYPE
NGIDAIVTASQIVTSLQTIISRNLEPNNAAVLTIGKIYGGDAHNVICEDVKLEGTLRT
LNSKTRNFMIDKIAKIVGDTASAFGCVGTLHVSDENYPAVINEKELVDTVISSTKELL
GEEKFILRPNPSLGGEDFSFYTEHCKGAFFHLGCKNEEKGLISPLHTSSFNIDEDCLP
IGVMMHVMNTLYFN"
misc_feature complement(217328..218467)
/locus_tag="CD196_0179"
/note="Metal-dependent
amidase/aminoacylase/carboxypeptidase [General function
prediction only]; Region: AbgB; COG1473"
/db_xref="CDD:31662"
misc_feature complement(217316..218437)
/locus_tag="CD196_0179"
/note="M20 Peptidase Aminoacylase 1 family; Region:
M20_Acy1; cd03886"
/db_xref="CDD:193507"
misc_feature complement(order(217385..217387,217988..217990,
218066..218068,218168..218170,218174..218176))
/locus_tag="CD196_0179"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193507"
misc_feature complement(order(217706..217714,217730..217732,
217736..217741,217751..217771,217820..217822,
217829..217831,217838..217840,217850..217855,
217919..217921))
/locus_tag="CD196_0179"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:193507"
gene complement(218893..220905)
/locus_tag="CD196_0180"
/db_xref="GeneID:8463371"
CDS complement(218893..220905)
/locus_tag="CD196_0180"
/codon_start=1
/transl_table=11
/product="sigma-54-dependent transcriptional regulator"
/protein_id="YP_003213231.1"
/db_xref="GI:260681946"
/db_xref="GeneID:8463371"
/translation="MKKSVALVNDSRKDLIDFLENNLKLVFGDSININRYFINEINDN
DIINDDVILVMSVERLDKIINNILDKKKVIVVRRTFREDKIYNLLSLPQGTNALIVND
SDETTLETISLFYKIGVTNIRPIPYMNDNNYKNIKIAITPGVPEKVPSFISDIFDLGH
RYIDISTFIEIINLLQIDSKEIQSNLVKYSEEIISLDTGIKDKYKELFLKIEELDTIL
NLSKDGILFTSKDGEINTYNSKVKDILDINEDIYGKYIDDIFVDSLKVLLSEKEILDK
VVVFNKKYINVNKKNIYNRDEKMGTYYSLQEITYIKKLEQNLTKKLREKGQIAKYTFK
DIKTNSPKMFECIDLAKKVSKSDLSILIRGESGTGKELIAQSIHNNSNRKNQPFIAVN
CAAVPENLLESQLFGYDKGTFTGGLKDGKQGLFELANNGTIFLDEIGDMPLELQTKLL
RVLQEKQIMPVGSHNVINIDVRIISATNKNLEQMIDNSQFREDLYYRLNTIPINIPPL
RERKEDILIIMEDLINKKLVITPEAKKLIQNYMWKGNIRELQNVTSYLNIMCEDIVLE
KDLPPNLRSSDNKNTSLKLKYSKNDILNILEILILNKESDVGIGRGLILKALLDKNLQ
ITEGKIKKIFEYLKKEELIICSSGRYGSKITQKGEDFYNKLKYKGL"
misc_feature complement(219187..220287)
/locus_tag="CD196_0180"
/note="Transcriptional regulator containing PAS, AAA-type
ATPase, and DNA-binding domains [Transcription / Signal
transduction mechanisms]; Region: RocR; COG3829"
/db_xref="CDD:33622"
misc_feature complement(219385..219846)
/locus_tag="CD196_0180"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(219793..219816)
/locus_tag="CD196_0180"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(219472..219474,219598..219600,
219790..219813))
/locus_tag="CD196_0180"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(219595..219612)
/locus_tag="CD196_0180"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(219415..219417)
/locus_tag="CD196_0180"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene 221376..222026
/locus_tag="CD196_0181"
/db_xref="GeneID:8463372"
CDS 221376..222026
/locus_tag="CD196_0181"
/codon_start=1
/transl_table=11
/product="cyclic nucleotide-binding protein"
/protein_id="YP_003213232.1"
/db_xref="GI:260681947"
/db_xref="GeneID:8463372"
/translation="MKAEKTSIYPIIKNNLNKISIVEYKKGQRFVASDKDLQEVFFII
EGVALVECTTRGGNKFLVDIVPENEFIGKISYIYEHNLKCDIFAKTNIKLFRFEKNVF
EEFYLKPDFIALFHRKCTRRIYELYKTRMVRELFSCTEVIAYCISNKQENNVCNIKAI
RNFSEIYSISRKSRYHSLLKLTEKEIVKKMGNTYEILNYDELHKLAFEVKEFLEDE"
misc_feature 221403..221969
/locus_tag="CD196_0181"
/note="cAMP-binding proteins - catabolite gene activator
and regulatory subunit of cAMP-dependent protein kinases
[Signal transduction mechanisms]; Region: Crp; COG0664"
/db_xref="CDD:31008"
misc_feature 221421..221690
/locus_tag="CD196_0181"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
cd00038"
/db_xref="CDD:28920"
misc_feature order(221589..221594,221619..221627)
/locus_tag="CD196_0181"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:28920"
gene complement(222166..223542)
/locus_tag="CD196_0182"
/db_xref="GeneID:8463373"
CDS complement(222166..223542)
/locus_tag="CD196_0182"
/codon_start=1
/transl_table=11
/product="drug/sodium antiporter"
/protein_id="YP_003213233.1"
/db_xref="GI:260681948"
/db_xref="GeneID:8463373"
/translation="MQELFSLKDENKRFYKILLSLCIPIIIQNLISTSVNVIDTIMIS
SLGETSVASVGVANQFFFLFNMSLSGITGGAGVFISQFYGKKDVSNIRKVTGLTCVLA
IVLSFVFVIPALLTPKPIIHIFSYDSEVVKLCIDYFSIAVFSYPLIAVSTVFSTGSRG
VRNPKLGMICSAFALVTNVILNYGFIFGNFGLPALGVKGAALATVIARICELILMITY
VYLYKKDYILKFGLKNLKAIDKIFIKSFSSKSFPIFVNDSVWAIGTVLYSVAYARAGT
SAIAASQIATSTGNFFIMTAVCIASGASIMLGNELGADHIKRAIEYAKKFSILVFSAG
LILGIILILNIPLLLKMFSVSDSLASDITKIFFIMGILMALKSFNTLVIIGILRSGGD
TKYALFLELGCMWLASIPLTFIAAFKGAPIFVLVLLTYSEEVVKFIFGVPRALSKKWA
INIVKEID"
misc_feature complement(222175..223542)
/locus_tag="CD196_0182"
/note="Na+-driven multidrug efflux pump [Defense
mechanisms]; Region: NorM; COG0534"
/db_xref="CDD:30880"
misc_feature complement(222994..223473)
/locus_tag="CD196_0182"
/note="MatE; Region: MatE; pfam01554"
/db_xref="CDD:190033"
misc_feature complement(222301..>222675)
/locus_tag="CD196_0182"
/note="MatE; Region: MatE; cl10513"
/db_xref="CDD:209159"
gene complement(223558..225471)
/locus_tag="CD196_0183"
/db_xref="GeneID:8463374"
CDS complement(223558..225471)
/locus_tag="CD196_0183"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_003213234.1"
/db_xref="GI:260681949"
/db_xref="GeneID:8463374"
/translation="MIVLSCNNLNKSFGIDSILENISFTVNEGDKIGIIGVNGTGKTT
LFKIISGIYGYDSGDIYTSKDCEIGYLEQNTNFYSDNTILEEVLEVFKNLIEMESYLR
ELEVKISEESTKTNSPIIEKIMDEYSHKLELFSDLNGYGYKSEAKGVLKGLGFSDNDM
DKPISILSGGEKTRVLLGKLLLKKPTLLLLDEPTNHLDSEAIEWLEVFLKQYKGTVML
ISHDRYFLDQSVNRIFEVHNKKLKVYNGNYSKFVELSKIEKELELKKFEDQQKEIKKQ
EESIERLKAYGREKHLKRARSKEKALDKVDVLDKPEAYRKKARIQFTPSVQSGNDVLQ
IRDVSMGYGERILFKDLDLDIYRGEKVALIGANGVGKSTLFKIITNELQPLSGNIKFG
TNVHVSYFHQEQKTLNLDNTIIDEIWENNTHLTQTTLRNMLGAFLFVDEEVFKKISTL
SGGERARVAILKLILSNANLLLLDEPTNHLDIDSKEVLEEALTNYDGTIFTISHDRYF
LNTVVDKILVLDENGITEYLGNYDYYIDKKRQIQEMSIIEEKEEKTRTQIKDEKRKER
EQREIEKKNRIKRQNIEKEIEKLEIEIEKLDILLCQEEVYSNPDKAKEVSQEKINLEN
NLASLYDEWEEFM"
misc_feature complement(223852..225471)
/locus_tag="CD196_0183"
/note="ATPase components of ABC transporters with
duplicated ATPase domains [General function prediction
only]; Region: Uup; COG0488"
/db_xref="CDD:30834"
misc_feature complement(<225253..225462)
/locus_tag="CD196_0183"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
misc_feature complement(224752..>224973)
/locus_tag="CD196_0183"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
misc_feature complement(224506..224772)
/locus_tag="CD196_0183"
/note="ABC transporter; Region: ABC_tran_2; pfam12848"
/db_xref="CDD:205105"
misc_feature complement(223903..224475)
/locus_tag="CD196_0183"
/note="ATP-binding cassette domain of elongation factor 3,
subfamily F; Region: ABCF_EF-3; cd03221"
/db_xref="CDD:213188"
gene 225607..226239
/locus_tag="CD196_0184"
/db_xref="GeneID:8463375"
CDS 225607..226239
/locus_tag="CD196_0184"
/note="modulates transcription in response to the
NADH/NAD(+) redox state"
/codon_start=1
/transl_table=11
/product="redox-sensing transcriptional repressor Rex"
/protein_id="YP_003213235.1"
/db_xref="GI:260681950"
/db_xref="GeneID:8463375"
/translation="MLGNKNISMAVIRRLPKYHRYLGDLLDRDIQRISSKELSDIIGF
TASQIRQDLNNFGGFGQQGYGYNVEALHTEIGKILGLDRPYNAVLVGAGNLGQAIANY
AGFRKAGFEIKALFDANPRMIGLKIREFEVLDSDTLEDFIKNNNIDIAVLCIPKNGAQ
EVINRVVKAGIKGVWNFAPLDLEVPKGVIVENVNLTESLFTLSYLMKEGK"
misc_feature 225607..226236
/locus_tag="CD196_0184"
/note="redox-sensing transcriptional repressor Rex;
Provisional; Region: PRK05472"
/db_xref="CDD:180107"
misc_feature 225619..225765
/locus_tag="CD196_0184"
/note="Putative DNA-binding protein N-terminus; Region:
Put_DNA-bind_N; pfam06971"
/db_xref="CDD:203556"
misc_feature 225850..226143
/locus_tag="CD196_0184"
/note="CoA binding domain; Region: CoA_binding; pfam02629"
/db_xref="CDD:202320"
gene 226378..226917
/locus_tag="CD196_0185"
/db_xref="GeneID:8463376"
CDS 226378..226917
/locus_tag="CD196_0185"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213236.1"
/db_xref="GI:260681951"
/db_xref="GeneID:8463376"
/translation="MVFVEELWKKAIEFHGHECPGLAIGFKAALAARKYLGCKQSGDE
EIVCISENDACGIDGIQVVLSCTMGKGNLLLRMTGKSVYHFFNRENGKSIRIYVKSKP
FQMDREGYKKYLLESDFEEIFEITDTKLRLPEKARIFKSLKCEVCGEFASEQYIRIEE
GKKVCLDCFNKYERFYEEY"
misc_feature 226384..226893
/locus_tag="CD196_0185"
/note="Formylmethanofuran dehydrogenase subunit E [Energy
production and conversion]; Region: COG2191"
/db_xref="CDD:32374"
misc_feature 226414..226749
/locus_tag="CD196_0185"
/note="FmdE, Molybdenum formylmethanofuran dehydrogenase
operon; Region: FmdE; pfam02663"
/db_xref="CDD:202336"
misc_feature 226807..226899
/locus_tag="CD196_0185"
/note="Prokaryotic dksA/traR C4-type zinc finger; Region:
zf-dskA_traR; pfam01258"
/db_xref="CDD:201690"
gene complement(227093..227263)
/gene="fdxA"
/locus_tag="CD196_0186"
/db_xref="GeneID:8463377"
CDS complement(227093..227263)
/gene="fdxA"
/locus_tag="CD196_0186"
/codon_start=1
/transl_table=11
/product="ferredoxin"
/protein_id="YP_003213237.1"
/db_xref="GI:260681952"
/db_xref="GeneID:8463377"
/translation="MAYKITDACISCGACEAECPVSCISAGDDAYVIDAGSCIDCGSC
AGACPVDAPQPE"
misc_feature complement(227117..227257)
/gene="fdxA"
/locus_tag="CD196_0186"
/note="4Fe-4S dicluster domain; Region: Fer4_10;
pfam13237"
/db_xref="CDD:205417"
misc_feature complement(<227105..>227254)
/gene="fdxA"
/locus_tag="CD196_0186"
/note="The HCP family of iron-sulfur proteins includes
hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
and carbon monoxide dehydrogenase (CODH), all of which
contain [Fe4-S4] metal clusters at their active sites.
These proteins have a conserved...; Region: HCP_like;
cl14655"
/db_xref="CDD:187409"
gene 227548..228615
/locus_tag="CD196_0187"
/db_xref="GeneID:8466074"
CDS 227548..228615
/locus_tag="CD196_0187"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_003213238.1"
/db_xref="GI:260681953"
/db_xref="GeneID:8466074"
/translation="MKNKLVYICIMSLLLFVVGCSNNPNKESTIKKDSKNNQSQVKEE
KREPVKKDITISFAGDVTMGNYKGSSYYGSFDHEFKRQGEDYNYFLKNVKPVFEKDDL
TVVNLEGPLTTASNAKEKKFAFKGKPGYVNILKSGSIEAVSIANNHSEDYFEEGMKDT
QFILDENKINYFGLGKDAVVDVKGIKVGLLGYNGLSTEYNEKNLKQMEDDIKSLKKKS
DVVVVYFHWGIELDYYPDKKQKDFAHYAIDKGADLVMGSHPHVIQGIEKYKNKYIAYS
LGNFCFGGNKNPSDTDSYIYQQTFTFSDNKLTSIKEPNIIPTSITSSSSRNNYQPKVL
DGSEKDRVLNKLEKISKDLNK"
misc_feature 227707..228396
/locus_tag="CD196_0187"
/note="Bacterial capsule synthesis protein PGA_cap;
Region: PGA_cap; smart00854"
/db_xref="CDD:197922"
misc_feature 227710..228393
/locus_tag="CD196_0187"
/note="CapA and related proteins, metallophosphatase
domain; Region: MPP_CapA; cd07381"
/db_xref="CDD:163624"
misc_feature order(227725..227727,227731..227733,227869..227871,
227986..227991,228223..228225,228319..228321,
228325..228327)
/locus_tag="CD196_0187"
/note="putative active site [active]"
/db_xref="CDD:163624"
misc_feature order(227725..227727,227731..227733,227869..227871,
227986..227988,228223..228225,228319..228321,
228325..228327)
/locus_tag="CD196_0187"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:163624"
gene 228785..230686
/locus_tag="CD196_0188"
/db_xref="GeneID:8463378"
CDS 228785..230686
/locus_tag="CD196_0188"
/codon_start=1
/transl_table=11
/product="oxidoreductase, acetyl-CoA synthase subunit"
/protein_id="YP_003213239.1"
/db_xref="GI:260681954"
/db_xref="GeneID:8463378"
/translation="MACNTCKMCESADKKLESFVASKDVETAFHRTEDQKVKCGFGLQ
GVCCRLCSNGPCRVTPKSPRGICGADADTIVARNFLRAVASGAACYLHVVENTAKNLK
NVGITKGVVKGEKTLNQLAEMFGIESDEKYDKCIKVADKVINDLYKSRDDKMELVEKI
AYAPRVKKWKELGIMPGGAKSEVFDAIVKSSTNLNSDPVDMLVNCLNLGISTGLYGLT
LTNLLNDVMLGEPVIRMAPVGFNVIDPDYINIMITGHQHSTFANFQDRLKDEDVIKLA
QSVGAKGFKLVGCTCVGQDLQLRGEHYQEVFAGHAGNNFTSEAVLSTGAIDIVLSEFN
CTIPGLEPIADKYKVKMVCLDDVAKKANAEYIGLDRSKLDELSNTLIEKALESYKERR
GSIEIDIPKDHGFEQSLTGVSEKNLKAFLGDSWKPLINLIAEGKIKGVAAVVGCSNMT
AGGHDVNTVELTKELIKKDIIVLSAGCSTGGLENVGLMSPGAEELAGENLKEVCKTLG
IPPVLNFGPCLAIGRLEIVATELAAELGIDLPQLPLVLSAPQWLEEQALADGAFGLAL
GLPLHLALPPFITGGKLVTEVLTEKLKDLTGGHVIVNPDPKSSANQLEEIIIDRRKNL
GLKDVECNA"
misc_feature 228809..230662
/locus_tag="CD196_0188"
/note="carbon-monoxide dehydrogenase, catalytic subunit;
Region: CO_DH_cata; TIGR01702"
/db_xref="CDD:130763"
misc_feature 228839..230662
/locus_tag="CD196_0188"
/note="The HCP family of iron-sulfur proteins includes
hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
and carbon monoxide dehydrogenase (CODH), all of which
contain [Fe4-S4] metal clusters at their active sites.
These proteins have a conserved...; Region: HCP_like;
cl14655"
/db_xref="CDD:187409"
misc_feature order(229028..229030,229034..229039,229046..229051,
230444..230449)
/locus_tag="CD196_0188"
/note="ACS interaction site; other site"
/db_xref="CDD:73219"
misc_feature order(229037..229039,229046..229048,229058..229060,
229067..229069,230441..230449)
/locus_tag="CD196_0188"
/note="CODH interaction site; other site"
/db_xref="CDD:73219"
misc_feature order(230120..230122,230213..230215,230336..230338,
230441..230443,230447..230449)
/locus_tag="CD196_0188"
/note="metal cluster binding site [ion binding]; other
site"
/db_xref="CDD:73219"
gene 230742..231152
/locus_tag="CD196_0189"
/db_xref="GeneID:8463379"
CDS 230742..231152
/locus_tag="CD196_0189"
/codon_start=1
/transl_table=11
/product="oxidoreductase, electron transfer subunit"
/protein_id="YP_003213240.1"
/db_xref="GI:260681955"
/db_xref="GeneID:8463379"
/translation="MLKHNKDYDMYTLDLENIDNDSRGHIELDSKHNNPVPILCRHCD
EPECVLACMSGAMHKDSESGIVSYDEEKCGSCYMCVMSCPYGLLKPDDRSKQNILKCD
LCKDEEYPRCVANCPSGAIELQKEENDELCSVRG"
misc_feature 230847..231113
/locus_tag="CD196_0189"
/note="4Fe-4S dicluster domain; Region: Fer4_11;
pfam13247"
/db_xref="CDD:205427"
misc_feature <230952..231125
/locus_tag="CD196_0189"
/note="RPB11 and RPB3 subunits of RNA polymerase; Region:
RNAP_RPB11_RPB3; cl11409"
/db_xref="CDD:209307"
gene 231250..232353
/locus_tag="CD196_0190"
/db_xref="GeneID:8463380"
CDS 231250..232353
/locus_tag="CD196_0190"
/codon_start=1
/transl_table=11
/product="oxidoreductase, NAD/FAD binding subunit"
/protein_id="YP_003213241.1"
/db_xref="GI:260681956"
/db_xref="GeneID:8463380"
/translation="MLHHVISEHRTLKQINFVDEDFMEQNNVKWIAGKTVKGIDINKK
VVQTEDITVNYDKLLIATGASSAIPPIKNLRDGNFVYSVRNIDDIYKIKEKAQNSKNV
VIIGAGLVGIDALVGLFKYEQLNISVAFMEKYILDRQLDEYTASVYENKFKEKGVKFY
PSASIQEIVLDNSKNVTGVAFSNGEVLDADMVIVATGVKPNADFLDGTGIEYDRGIII
DDMCQTTQKDIYAAGDVVGKNAIWPLAVKQGIVAAYNMVGKDKKIEDEFAFKNSMNFM
DIPTISIGMNTPVDDSYKVLTRHGINDYKKFVFKDNVIYGAVIQGDISYVGVLTYLIK
NKVEIYDLENRIFDVCYADFFNIKENGEFCYSV"
misc_feature 231250..>232266
/locus_tag="CD196_0190"
/note="NAD(P)H-nitrite reductase [Energy production and
conversion]; Region: NirB; COG1251"
/db_xref="CDD:31443"
misc_feature 231550..231801
/locus_tag="CD196_0190"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
gene complement(232492..233679)
/locus_tag="CD196_0191"
/db_xref="GeneID:8463381"
CDS complement(232492..233679)
/locus_tag="CD196_0191"
/codon_start=1
/transl_table=11
/product="cyclopropane-fatty-acyl-phospholipid synthase"
/protein_id="YP_003213242.1"
/db_xref="GI:260681957"
/db_xref="GeneID:8463381"
/translation="MNITKNFLKDYLEKFGETPFLVRLKDEEEFLIGEGSPQFKVIVN
NDISKSELLKSTSLALGEAYINRDIEVEGDLFLTLNLLLKQIDKFNIDNSAVKHLLHS
SNSMRHQKKEIHAHYDIGNDFYSLWLDKTLSYSCAYFRNDNDTLYDAQVNKVHHILTK
LNLEEGMSLLDIGCGWGFLLIEAAKKYKIHGVGITLSEEQFKEFNARIKEENLQDYLE
VRLMDYRELKKSDLMFDRVVSVGMLEHVGRENYELFIKNVNAVLKDGGLFLLHYISGL
QESYGDPWIKKYIFPGGVIPSLREMIHICSDYKYHTIDVESLRLHYVKTLLYWQKSFS
ENLPKIKEMFDDKFIRMWDLYLCSCAAAFNTGIIDIHQILFTKGIKNDLPLTREYMYN
CSK"
misc_feature complement(232549..233370)
/locus_tag="CD196_0191"
/note="Cyclopropane fatty acid synthase and related
methyltransferases [Cell envelope biogenesis, outer
membrane]; Region: Cfa; COG2230"
/db_xref="CDD:32411"
misc_feature complement(232861..233175)
/locus_tag="CD196_0191"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(232960..232962,233008..233016,
233092..233097,233146..233166))
/locus_tag="CD196_0191"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 233949..234776
/locus_tag="CD196_0192"
/db_xref="GeneID:8463382"
CDS 233949..234776
/locus_tag="CD196_0192"
/codon_start=1
/transl_table=11
/product="ATP-binding protein"
/protein_id="YP_003213243.1"
/db_xref="GI:260681958"
/db_xref="GeneID:8463382"
/translation="MMEVYALVGSSGTGKSFKALEFAYENDIEYIIDDGILIYKNKVL
AGISAKQANTTIEAVKRAIFYNLEHRQEVREAIKKENIRKILIIGTSKKMVNQIVERL
SIGRVCKFINIQDISTKYEIEIAKQARKEGNHVIPVPAVEIKSMASGLSINSLKRLFR
KGNNRNMVVLEKTIIRPTFSYIGKFYISADVIKQIIEYEVYNFGSIDRINKINIENCN
NFMNIFVSININDLETIKKIEDIQQTIKKSIEKMTLVNVQKIDINIHKIKKINFLQC"
misc_feature <234015..234185
/locus_tag="CD196_0192"
/note="Pyruvate ferredoxin/flavodoxin oxidoreductase;
Region: POR; cl00546"
/db_xref="CDD:207101"
gene 234905..236170
/gene="gluD"
/locus_tag="CD196_0193"
/db_xref="GeneID:8463383"
CDS 234905..236170
/gene="gluD"
/locus_tag="CD196_0193"
/codon_start=1
/transl_table=11
/product="NAD-specific glutamate dehydrogenase"
/protein_id="YP_003213244.1"
/db_xref="GI:260681959"
/db_xref="GeneID:8463383"
/translation="MSGKDVNVFEMAQSQVKNACDKLGMEPAVYELLKEPMRVIEVSI
PVKMDDGSIKTFKGFRSQHNDAVGPTKGGIRFHQNVSRDEVKALSIWMTFKCSVTGIP
YGGGKGGIIVDPSTLSQGELERLSRGYIDGIYKLIGEKVDVPAPDVNTNGQIMSWMVD
EYNKLTGQSSIGVITGKPVEFGGSLGRTAATGFGVAVTAREAAAKLGIDMKKAKIAVQ
GIGNVGSYTVLNCEKLGGTVVAMAEWCKSEGSYAIYNENGLDGQAMLDYMKEHGNLLN
FPGAKRISLEEFWASDVDIVIPAALENSITKEVAESIKAKLVCEAANGPTTPEADEVF
AERGIVLTPDILTNAGGVTVSYFEWVQNLYGYYWSEEEVEQKEEIAMVKAFESIWKIK
EEYNVTMREAAYMHSIKKVAEAMKLRGWY"
misc_feature 234923..236167
/gene="gluD"
/locus_tag="CD196_0193"
/note="Glutamate dehydrogenase/leucine dehydrogenase
[Amino acid transport and metabolism]; Region: GdhA;
COG0334"
/db_xref="CDD:30682"
misc_feature 235010..235402
/gene="gluD"
/locus_tag="CD196_0193"
/note="Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
Region: ELFV_dehydrog_N; pfam02812"
/db_xref="CDD:202408"
misc_feature 235448..236143
/gene="gluD"
/locus_tag="CD196_0193"
/note="NAD(P) binding domain of glutamate dehydrogenase,
subgroup 1; Region: NAD_bind_1_Glu_DH; cd01076"
/db_xref="CDD:133445"
misc_feature order(235565..235573,235631..235636,235802..235807,
235865..235873)
/gene="gluD"
/locus_tag="CD196_0193"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:133445"
gene 236363..237019
/locus_tag="CD196_0194"
/db_xref="GeneID:8466173"
CDS 236363..237019
/locus_tag="CD196_0194"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213245.1"
/db_xref="GI:260681960"
/db_xref="GeneID:8466173"
/translation="MYFLPPHDYKLEELDWIFGHELMYFKSKDLHLKYLVLFLKIVYW
FNPFIYIMEKYMDLDCELYCDERVLKNCTVQQKQEYALTIVNSMKRGINFSNKFVTGL
NKQSDIRKRVMNMFSEKHKNGILMALIISLFSSITFFKFDSTSLIEENDFLERSRYAF
EGRQEDMFVTIDSTYADAPIKLRKEHEENCRVNGIVPKDSDSIEIIPRFYKDCMDLKK
"
misc_feature <236396..236704
/locus_tag="CD196_0194"
/note="Peptidase family M48; Region: Peptidase_M48;
cl12018"
/db_xref="CDD:214202"
gene 237350..238483
/locus_tag="CD196_0195"
/db_xref="GeneID:8463384"
CDS 237350..238483
/locus_tag="CD196_0195"
/codon_start=1
/transl_table=11
/product="membrane-associated metalloprotease"
/protein_id="YP_003213246.1"
/db_xref="GI:260681961"
/db_xref="GeneID:8463384"
/translation="MSNFILNGIFRTVIVSSLSILLILIFKKNVFKRFSKKFNYYIWM
IVVIKLFLPFTYYTFTINILRSKKHININNINLEGFNNVSTISNNIILYTWIITVVVY
LIYTIFKYIKLKNLINDLSYDVDDREIVNLYKNILEEFNITKDIKLKYSYEVETPAFF
NSCVLLPPHEYKLKELDWIFRHELMHFKSRDLYLKYVILFLKTVYWFNPFIYIMDKHI
DLDCELYCDERVLKNRNSEEKKDYALTILNAMRKGSNTSNKFIAGLHKQSDIKKRVMN
MFNEKYKNGILMALTLCLLSSITFLKVNSTSIVNLNVLPKGFEDLRTVSSIRFSVIGF
TYADAPKNMREEYKINCESLGLIPKDSDKIEVGVEYYDSLLND"
misc_feature 237443..238177
/locus_tag="CD196_0195"
/note="Peptidase family M48; Region: Peptidase_M48;
cl12018"
/db_xref="CDD:214202"
gene <238747..238980
/locus_tag="CD196_0195A"
/pseudo
/db_xref="GeneID:8463385"
gene 239408..240430
/locus_tag="CD196_0196"
/db_xref="GeneID:8463386"
CDS 239408..240430
/locus_tag="CD196_0196"
/codon_start=1
/transl_table=11
/product="cell wall hydrolase"
/protein_id="YP_003213247.1"
/db_xref="GI:260681962"
/db_xref="GeneID:8463386"
/translation="MKKKILIPVFASVMALSVSSIVNADEVNDSSQNKDDKTNTELNL
GEYKEVKYKVAKIKDGVAIKIREEGQVQNIAYSGDEFTVLGTQGEWVKVKVEDGEGWL
ATRYVDISEGVGYTNADKVNLRKDKSESSEVIEELEKGSSLLVLEDNGDWLKVKDGET
EGYVKSSYISDKAPVIEEPQVNPSIDQNVDSTNNNQQNNANTNQQNNNSNVPTANSNA
VQAVLNLAYSKQGCPYVWGAEGPNTFDCSGFTQYVYRNAVGKNIPRTSKAQSKYGQTV
SKANLQPGDLVFFTTNGSGSVSHVGIYVGGGNMIHSPSTGKTVSVTSINSSYYTARFV
TAKRIL"
misc_feature 239408..>239965
/locus_tag="CD196_0196"
/note="SH3 domain protein [Signal transduction
mechanisms]; Region: COG3103"
/db_xref="CDD:32917"
misc_feature <239636..239728
/locus_tag="CD196_0196"
/note="Src Homology 3 domain superfamily; Region: SH3;
cl17036"
/db_xref="CDD:213143"
misc_feature 239762..239917
/locus_tag="CD196_0196"
/note="Bacterial SH3 domain; Region: SH3_3; pfam08239"
/db_xref="CDD:116824"
misc_feature <240065..240418
/locus_tag="CD196_0196"
/note="Cell wall-associated hydrolases
(invasion-associated proteins) [Cell envelope biogenesis,
outer membrane]; Region: Spr; COG0791"
/db_xref="CDD:31134"
misc_feature 240098..240421
/locus_tag="CD196_0196"
/note="NlpC/P60 family; Region: NLPC_P60; pfam00877"
/db_xref="CDD:189752"
gene 240726..241646
/gene="pyrB"
/locus_tag="CD196_0197"
/db_xref="GeneID:8463387"
CDS 240726..241646
/gene="pyrB"
/locus_tag="CD196_0197"
/codon_start=1
/transl_table=11
/product="aspartate carbamoyltransferase catalytic chain"
/protein_id="YP_003213248.1"
/db_xref="GI:260681963"
/db_xref="GeneID:8463387"
/translation="MLKSRNLIQPEDFSIEEIDEILELAQKIIDNPSKYSRICEGKLL
ATLFYEPSTRTRLSFESAMNRLGGRVVGFSEPNSSSASKGETLGDTMRIVSGYVDIIA
MRHPQSGAASEAARYTEVPFINAGDGKNQHPTQTLTDLLTIKSLKGTLESHTIGLCGD
LKYGRTVHSLVKAMARYKNTKFVFIAPEELKMPDYIKEAIKGHAYYETNNLDDVIGSL
DVLYMTRVQQERFEDKSEYERLKNYYILNKAKLEKASKDMLVMHPLPRVNEIDIDVDS
DDRAVYFKQAKYGMYVRMALIIKLLGINED"
misc_feature 240726..241640
/gene="pyrB"
/locus_tag="CD196_0197"
/note="aspartate carbamoyltransferase catalytic subunit;
Provisional; Region: pyrB; PRK00856"
/db_xref="CDD:179144"
misc_feature 240738..241157
/gene="pyrB"
/locus_tag="CD196_0197"
/note="Aspartate/ornithine carbamoyltransferase,
carbamoyl-P binding domain; Region: OTCace_N; pfam02729"
/db_xref="CDD:202362"
misc_feature 241185..241625
/gene="pyrB"
/locus_tag="CD196_0197"
/note="Aspartate/ornithine carbamoyltransferase, Asp/Orn
binding domain; Region: OTCace; pfam00185"
/db_xref="CDD:201065"
gene 241685..242377
/gene="pyrK"
/locus_tag="CD196_0198"
/db_xref="GeneID:8466491"
CDS 241685..242377
/gene="pyrK"
/locus_tag="CD196_0198"
/note="responsible for channeling the electrons from the
oxidation of dihydroorotate from the FMN redox center in
the pyrD subunit to the ultimate electron acceptor NAD(+)"
/codon_start=1
/transl_table=11
/product="dihydroorotate dehydrogenase electron transfer
subunit"
/protein_id="YP_003213249.1"
/db_xref="GI:260681964"
/db_xref="GeneID:8466491"
/translation="MYKILENIYIGEDMYRMKVKGNFEGKMGQFYMLRAWDTYPVLSR
PISIHDIDEEGITFLYKVVGEGTQILSNLKVNDNIKLEGPYGNGYAKVDGKVALVGGG
IGVAPLYLVAKNIKNCDAYLGFREDVILEDEYKQVCNKVYTTVGNTFVTDIIDVEKYD
YILTCGPTPMMEKLVKMVEGTKTRIMVSLENHMACGVGACLVCTCKTNGGNKKTCKDG
PVFWGEDVIFNG"
misc_feature 241685..242368
/gene="pyrK"
/locus_tag="CD196_0198"
/note="dihydroorotate dehydrogenase electron transfer
subunit; Reviewed; Region: PRK00054"
/db_xref="CDD:178828"
misc_feature 241694..242350
/gene="pyrK"
/locus_tag="CD196_0198"
/note="FAD/NAD binding domain in the electron transfer
subunit of dihydroorotate dehydrogenase. Dihydroorotate
dehydrogenases (DHODs) catalyze the only redox reaction in
pyrimidine de novo biosynthesis. They catalyze the
oxidation of (S)-dihydroorotate to...; Region:
DHOD_e_trans; cd06218"
/db_xref="CDD:99814"
misc_feature order(241808..241810,241814..241825,241859..241867,
241883..241891,241991..241993,242255..242260)
/gene="pyrK"
/locus_tag="CD196_0198"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99814"
misc_feature order(241814..241816,241820..241825)
/gene="pyrK"
/locus_tag="CD196_0198"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99814"
misc_feature order(241880..241882,241889..241891,241898..241900,
241910..241912,241934..241936,241940..241942)
/gene="pyrK"
/locus_tag="CD196_0198"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99814"
misc_feature order(241976..241978,241988..241999,242003..242005)
/gene="pyrK"
/locus_tag="CD196_0198"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99814"
misc_feature order(241991..241996,242051..242059,242180..242185)
/gene="pyrK"
/locus_tag="CD196_0198"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99814"
misc_feature order(242267..242269,242282..242284,242291..242293,
242327..242329)
/gene="pyrK"
/locus_tag="CD196_0198"
/note="Iron coordination center [ion binding]; other site"
/db_xref="CDD:99814"
gene 242424..243272
/gene="pyrD"
/locus_tag="CD196_0199"
/db_xref="GeneID:8466498"
CDS 242424..243272
/gene="pyrD"
/locus_tag="CD196_0199"
/note="catalyzes the conversion of dihydroorotate to
orotate in the pyrimidine biosynthesis pathway, using a
flavin nucleotide as an essential cofactor; subclass 1B is
a heterotetramer consisting of two PyrDB subunits, similar
to the PyrDA subunits and two PyrK subunits"
/codon_start=1
/transl_table=11
/product="dihydroorotate dehydrogenase 1B"
/protein_id="YP_003213250.1"
/db_xref="GI:260681965"
/db_xref="GeneID:8466498"
/translation="MASGTFGFGKEYNEIYDIQKLGGISSKGLTLNKKPGNNGMRVHE
TPSGMMNSVGLENPGVQGFIDYELPFFSKLDLVRIANVGGGTLEDYLLGVQMLNDKPI
DIIELNISCPNVKAGGMAFGIKNEVAREVVREVRNITKLPLVIKLSPNAEDIVGMAKV
CEEEGADGVSLVNTFKAMAIDIKNRRPVFENVYAGLSGPAIKPIALRMVHEVCKNVNI
PVMGMGGITKATDAIEFIMAGATCIQVGTANFMNPRIGIEIIDGINEFMDREGIKSLD
EIRGII"
misc_feature 242424..243266
/gene="pyrD"
/locus_tag="CD196_0199"
/note="dihydroorotate dehydrogenase (subfamily 1) family
protein; Region: pyrD_sub1_fam; TIGR01037"
/db_xref="CDD:130109"
misc_feature 242427..243269
/gene="pyrD"
/locus_tag="CD196_0199"
/note="Dihydroorotate dehydrogenase (DHOD) class 1B
FMN-binding domain. DHOD catalyzes the oxidation of
(S)-dihydroorotate to orotate. This is the fourth step and
the only redox reaction in the de novo biosynthesis of
UMP, the precursor of all pyrimidine...; Region:
DHOD_1B_like; cd04740"
/db_xref="CDD:73402"
misc_feature order(242454..242459,242466..242468,242502..242504,
242526..242528,242544..242549,242553..242555,
242589..242591,243018..243020,243174..243176,
243180..243185)
/gene="pyrD"
/locus_tag="CD196_0199"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:73402"
misc_feature order(242505..242507,242574..242576,242745..242747,
242754..242756,242859..242861,242937..242945,
243015..243017,243096..243098,243159..243164)
/gene="pyrD"
/locus_tag="CD196_0199"
/note="active site"
/db_xref="CDD:73402"
misc_feature order(242505..242507,242574..242576,242745..242747,
242859..242861,242937..242942,243015..243017,
243096..243098,243159..243164)
/gene="pyrD"
/locus_tag="CD196_0199"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73402"
misc_feature order(242556..242564,242790..242792,242874..242876,
242949..242969,242976..242984,243018..243020,
243027..243035,243039..243044,243123..243125,
243132..243137,243255..243257,243264..243266)
/gene="pyrD"
/locus_tag="CD196_0199"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:73402"
misc_feature order(242574..242576,242745..242747,242751..242753,
242940..242945)
/gene="pyrD"
/locus_tag="CD196_0199"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73402"
gene 243357..243941
/gene="pyrE"
/locus_tag="CD196_0200"
/db_xref="GeneID:8466493"
CDS 243357..243941
/gene="pyrE"
/locus_tag="CD196_0200"
/note="involved in fifth step of pyrimidine biosynthesis;
converts orotidine 5'-phosphate and diphosphate to orotate
and 5-phospho-alpha-D-ribose 1-diphosphate"
/codon_start=1
/transl_table=11
/product="orotate phosphoribosyltransferase"
/protein_id="YP_003213251.1"
/db_xref="GI:260681966"
/db_xref="GeneID:8466493"
/translation="MSKVDVVDILKKSDALLEGHFLLSSGKHSNRYVQCAKVLRFPEY
AAEVLSTVVEQIKDLDIDLVVGPAMGGVIVSYELGRQLGKEAVFTERKDNTMELRRGF
EVKKGAKIIIAEDVVTTGKSTMETKRVLEALGGEVVGVACIADRTNHDIGMPIYSAIK
LDIQVYESDECPLCKEGKLPVVKPGSREFKELGM"
misc_feature 243510..>243740
/gene="pyrE"
/locus_tag="CD196_0200"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(243558..243560,243564..243566,243696..243704,
243708..243722)
/gene="pyrE"
/locus_tag="CD196_0200"
/note="active site"
/db_xref="CDD:206754"
gene 244156..245082
/locus_tag="CD196_0201"
/db_xref="GeneID:8466495"
CDS 244156..245082
/locus_tag="CD196_0201"
/codon_start=1
/transl_table=11
/product="ketopantoate reductase"
/protein_id="YP_003213252.1"
/db_xref="GI:260681967"
/db_xref="GeneID:8466495"
/translation="MKNQLNENHKKVVFFGVGAVGATFAEQFFNSKYDFKILCDNERK
KRYLEEGFIINGKRYDFNYVTKDEYKQEADFIIIGLKYNNLKENIKELDGLVGKNTVI
MSLLNGVDSEEIIGERFGIGKMVYSYVTNIDAKKINNNIIHTTNGIIVFGNKDNSEDR
KTNIITEVFDDVNIEYILSKDIQRDMWWKYMVNIGVNQTSAILGAPYGVFQSSEHLRE
LAKSAMREVVAIAQAKDISLTEDDVENSLHRILEHSKEGRTSMLQDVEAHRPTEVDMF
SKNICKLGKKYSIPTPINQTLFYMIKVIESRF"
misc_feature 244252..245076
/locus_tag="CD196_0201"
/note="2-dehydropantoate 2-reductase; Region: apbA_panE;
TIGR00745"
/db_xref="CDD:162018"
misc_feature 244276..244545
/locus_tag="CD196_0201"
/note="Ketopantoate reductase PanE/ApbA; Region: ApbA;
pfam02558"
/db_xref="CDD:202282"
misc_feature 244696..245070
/locus_tag="CD196_0201"
/note="Ketopantoate reductase PanE/ApbA C terminal;
Region: ApbA_C; pfam08546"
/db_xref="CDD:203977"
gene complement(245134..246024)
/locus_tag="CD196_0202"
/db_xref="GeneID:8463388"
CDS complement(245134..246024)
/locus_tag="CD196_0202"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_003213253.1"
/db_xref="GI:260681968"
/db_xref="GeneID:8463388"
/translation="MFEELKTFVAVVEYKNFTKAGEYLNLSQPSVSKHIKNLENYFKV
VLINRSIKQKTIFITESGQILYKRAKEILNLLNITYHDVSQVSDAITGHLKIGASLTI
GEYILPNFLALFSQKYPDIYVEVFIKNTSIVSSHVKDYILDIGLIEGTCSSPSFIQEY
FFEDKMVLALPYNSHLLKDFSFDKLQDQKWIVREDGSGTRDYLDMFLSVKEIIPKSMM
VFGSNYAVKESVRNNLGITIVSNLVTSLPVLNNELSVIELGSSYNRHFSYIFPKDITL
SKAATIFIEELKIFSNLNSI"
misc_feature complement(245161..246024)
/locus_tag="CD196_0202"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(245836..246021)
/locus_tag="CD196_0202"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(245164..245748)
/locus_tag="CD196_0202"
/note="C-terminal substrate binding domain of LysR-type
transcriptional regulator CysL, which activates the
transcription of the cysJI operon encoding sulfite
reductase, contains the type 2 periplasmic binding fold;
Region: PBP2_CysL_like; cd08420"
/db_xref="CDD:176112"
misc_feature complement(order(245329..245334,245338..245343,
245359..245376,245644..245664,245668..245670,
245680..245682,245689..245694,245698..245703))
/locus_tag="CD196_0202"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176112"
gene 246212..247243
/locus_tag="CD196_0203"
/db_xref="GeneID:8463389"
CDS 246212..247243
/locus_tag="CD196_0203"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213254.1"
/db_xref="GI:260681969"
/db_xref="GeneID:8463389"
/translation="MLKKKSSLTLKTIREILPGLFISVLVGYISIFISILIPKVGAAS
ISIFLGMFVGNLFLNQKVFQKGYKFSETDLLSYSIVLLGATLSVSTLIDLKVSGILFI
ILQMTITIIAALYIGKKLGFEENFRFLMASGNAVCGSSAIGAIVPVVNATDKEKGIAV
TIVNVTGIFLMFLLPIISQFLYSHELVKTSAMIGGTLQSIGQVVASGAIVGENVKDLA
TIFKIVRVIFLVVVVLVFGHMKNQSNREILEEEKDEIKKKKVTIPWYVIGFFITCALF
SMNIIPKEVSVLCKEISNKLEIIALAAIGLKVNVKDLVKQGKEVSLYGLFVGTVQVVS
AVVLIKIFI"
misc_feature 246263..247183
/locus_tag="CD196_0203"
/note="Conserved hypothetical protein 698; Region:
Cons_hypoth698; pfam03601"
/db_xref="CDD:112419"
gene 247537..248412
/locus_tag="CD196_0204"
/db_xref="GeneID:8463390"
CDS 247537..248412
/locus_tag="CD196_0204"
/codon_start=1
/transl_table=11
/product="DNA glycosylase"
/protein_id="YP_003213255.1"
/db_xref="GI:260681970"
/db_xref="GeneID:8463390"
/translation="MNVYEKGNGVILEGVTDFDPVHIFECGQCFRWHKQEDGSYTGVA
RGRILNVKKENDKIYLNNTNLKEFNSIWYNYFDLGTDYTEIKNKLKNMDEYLNKATEF
GWGIRILRQDGWEMLISFIISSNNRIPMIQRAIENLSRKFGKYIGEYEGNEYYAFPTP
EELNKASQEEIRACQTGFRDKYIKSTTQAVIENNDEVSEYTNLSTEDCRKELLKFNGV
GPKVCDCIALFGMQKYDSFPVDVWVKRVMQEFYIDEDMSLPKMRTYGIDKFKEMSGFA
QQYLFYYARELGIGK"
misc_feature 247564..247887
/locus_tag="CD196_0204"
/note="8-oxoguanine DNA glycosylase, N-terminal domain;
Region: OGG_N; pfam07934"
/db_xref="CDD:203810"
misc_feature 247579..248391
/locus_tag="CD196_0204"
/note="8-oxoguanine DNA-glycosylase (ogg); Region: ogg;
TIGR00588"
/db_xref="CDD:211589"
misc_feature 247876..248388
/locus_tag="CD196_0204"
/note="endonuclease III; includes endonuclease III
(DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA
glycosidases (Alka-family) and other DNA glycosidases;
Region: ENDO3c; cd00056"
/db_xref="CDD:28938"
misc_feature order(247909..247917,247924..247926,248071..248073)
/locus_tag="CD196_0204"
/note="minor groove reading motif; other site"
/db_xref="CDD:28938"
misc_feature 248179..248202
/locus_tag="CD196_0204"
/note="helix-hairpin-helix signature motif; other site"
/db_xref="CDD:28938"
misc_feature order(248209..248211,248365..248367,248377..248379)
/locus_tag="CD196_0204"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:28938"
misc_feature 248254..248256
/locus_tag="CD196_0204"
/note="active site"
/db_xref="CDD:28938"
gene 248430..249920
/gene="cls"
/locus_tag="CD196_0205"
/db_xref="GeneID:8463391"
CDS 248430..249920
/gene="cls"
/locus_tag="CD196_0205"
/codon_start=1
/transl_table=11
/product="cardiolipin synthetase"
/protein_id="YP_003213256.1"
/db_xref="GI:260681971"
/db_xref="GeneID:8463391"
/translation="MGVIGTIFLFYLIISYLAGAIISVIILLENRDPAKTMSWLLMFI
IFPGVGLMIYAISGRNIRKRKLFKTQKLANNIKEKKLFDTLEKITEIVELEKESIKQN
KLLRDEEDGSYRKRVINMLLKTGMFPFTKNNKVDVFVDGNEKFKRLIEDIREAKDHIH
LEYFIIKDSEIGRVLKEELIKKAKEGIKIRILYDDVGCWRFWFNRKFFREMREVGIEI
AAFLPTKFPIIGGKLNYRNHRKIVVIDGIIGYTGGINIGDEYLGKNDKFGYWRDTHIR
IKGISVYMLQMTFLIDWYYTTKEVLVTKNYFPSVGNVGESMIQVVASGPDSDWEDIHY
AYFSAICQARKNVYIETPYFIPDESLLKAIKSAALSGVDVRIIFPKIADHKIVNIASY
SYFEEILRAGGKVYLYNKGFIHSKVVIIDDKIASAGTANMDLRSFMLNFEVNAFIYDE
EVIRVMTDDFFEDLSHCEELNLEVFKNRNIIQKIKESVARLFSPIL"
misc_feature 248439..249917
/gene="cls"
/locus_tag="CD196_0205"
/note="cardiolipin synthetase; Reviewed; Region: cls;
PRK01642"
/db_xref="CDD:179315"
misc_feature 248475..248609
/gene="cls"
/locus_tag="CD196_0205"
/note="Phospholipase_D-nuclease N-terminal; Region:
PLDc_N; pfam13396"
/db_xref="CDD:205574"
misc_feature 248844..249311
/gene="cls"
/locus_tag="CD196_0205"
/note="Catalytic domain, repeat 1, of bacterial
cardiolipin synthase and similar proteins; Region:
PLDc_CLS_1; cd09110"
/db_xref="CDD:197209"
misc_feature order(249141..249143,249147..249149,249186..249188,
249192..249194,249243..249245)
/gene="cls"
/locus_tag="CD196_0205"
/note="putative active site [active]"
/db_xref="CDD:197209"
misc_feature 249141..249143
/gene="cls"
/locus_tag="CD196_0205"
/note="catalytic site [active]"
/db_xref="CDD:197209"
misc_feature 249390..249911
/gene="cls"
/locus_tag="CD196_0205"
/note="catalytic domain repeat 2 of bacterial cardiolipin
synthase and similar proteins; Region: PLDc_CLS_2;
cd09112"
/db_xref="CDD:197211"
misc_feature order(249669..249671,249675..249677,249714..249716,
249720..249722,249753..249755)
/gene="cls"
/locus_tag="CD196_0205"
/note="putative active site [active]"
/db_xref="CDD:197211"
misc_feature 249669..249671
/gene="cls"
/locus_tag="CD196_0205"
/note="catalytic site [active]"
/db_xref="CDD:197211"
gene 250113..250397
/gene="groES"
/locus_tag="CD196_0206"
/db_xref="GeneID:8465950"
CDS 250113..250397
/gene="groES"
/locus_tag="CD196_0206"
/codon_start=1
/transl_table=11
/product="10 kDa chaperonin"
/protein_id="YP_003213257.1"
/db_xref="GI:260681972"
/db_xref="GeneID:8465950"
/translation="MKIRPLADRVVIKKVEAEEKTASGIVLPGAAKEQPQIAEVVEVG
PGGIVEGKEIKMELTVGDKVIFQKYSGTEVKIEGQEYTILRQSDVLAVIE"
misc_feature 250116..250391
/gene="groES"
/locus_tag="CD196_0206"
/note="Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10
cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase,
to assist the folding and assembly of proteins and is
found in eubacterial cytosol, as well as in the matrix of
mitochondria and chloroplasts. It...; Region: cpn10;
cd00320"
/db_xref="CDD:73192"
misc_feature order(250116..250118,250122..250124,250128..250130,
250137..250139,250218..250223,250281..250283,
250311..250313,250326..250328,250332..250334,
250380..250388)
/gene="groES"
/locus_tag="CD196_0206"
/note="oligomerisation interface [polypeptide binding];
other site"
/db_xref="CDD:73192"
misc_feature 250164..250205
/gene="groES"
/locus_tag="CD196_0206"
/note="mobile loop; other site"
/db_xref="CDD:73192"
misc_feature order(250242..250244,250275..250277)
/gene="groES"
/locus_tag="CD196_0206"
/note="roof hairpin; other site"
/db_xref="CDD:73192"
gene 250430..252058
/gene="groEL"
/locus_tag="CD196_0207"
/db_xref="GeneID:8466196"
CDS 250430..252058
/gene="groEL"
/locus_tag="CD196_0207"
/codon_start=1
/transl_table=11
/product="60 kDa chaperonin"
/protein_id="YP_003213258.1"
/db_xref="GI:260681973"
/db_xref="GeneID:8466196"
/translation="MAKEIKFSEETRRALEAGVNKLADTVKVTLGPKGRNVILDKKFG
SPLITNDGVTIAKEIELEDRFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREG
LKNVTAGANPILLRKGIQKAVIVAVEELKNQSRIVETQEAISQVASISAGDEEVGKLI
AEAMEIVGKDGVITVEESQTMNTELDAVEGMQFDRGFVSAYMVTDVDKMEAVLNDPYI
LITDKKISNIQELLPVLEQIVQQGKKLLIIAEDVEGEALSTLVVNKLRGTFDVVAVKA
PGFGDRRKEMLQDIAILTGAQVISEELGYDLKEADLSMLGRASSVKVTKESTTIVDGS
GDKKAIEDRVTQIKHQVEQTTSDFDREKLMERLAKLAGGVAVVKVGAATEVELKERKL
RIEDALNATRAAVEEGIVAGGGTAFVSVIPAIGTLIESLEGEVKLGAQIVKKALEEPL
RQIAINAGLEGAVIVQNVVNSEAETGFDALNEKYVNMIEAGIVDPTKVSRSALQNAAS
IASTFLTTEAAVADLPEKEDAGMPGMGGGMPGMM"
misc_feature 250430..252016
/gene="groEL"
/locus_tag="CD196_0207"
/note="chaperonin GroEL; Reviewed; Region: groEL;
PRK12849"
/db_xref="CDD:183791"
misc_feature 250436..251995
/gene="groEL"
/locus_tag="CD196_0207"
/note="GroEL_like type I chaperonin. Chaperonins are
involved in productive folding of proteins. They share a
common general morphology, a double toroid of 2 stacked
rings, each composed of 7-9 subunits. The symmetry of type
I is seven-fold and they are found...; Region: GroEL;
cd03344"
/db_xref="CDD:48161"
misc_feature order(250436..250438,250448..250450,250499..250501,
250532..250543,250547..250549,250562..250567,
250571..250573,250601..250603,250607..250609,
250631..250633,250643..250645,250652..250654,
251012..251014,251108..251110,251192..251194,
251573..251575,251579..251581,251801..251803,
251963..251965,251972..251992)
/gene="groEL"
/locus_tag="CD196_0207"
/note="ring oligomerisation interface [polypeptide
binding]; other site"
/db_xref="CDD:48161"
misc_feature order(250517..250525,250685..250687,250697..250699,
250874..250876,251615..251617,251666..251668,
251786..251788,251903..251905,251909..251911)
/gene="groEL"
/locus_tag="CD196_0207"
/note="ATP/Mg binding site [chemical binding]; other site"
/db_xref="CDD:48161"
misc_feature order(250751..250753,251726..251728,251780..251782,
251807..251809,251813..251818,251825..251827)
/gene="groEL"
/locus_tag="CD196_0207"
/note="stacking interactions; other site"
/db_xref="CDD:48161"
misc_feature order(250847..250849,250979..250981,251000..251002,
251546..251548,251648..251653)
/gene="groEL"
/locus_tag="CD196_0207"
/note="hinge regions; other site"
/db_xref="CDD:48161"
gene 252320..253060
/locus_tag="CD196_0208"
/db_xref="GeneID:8466195"
CDS 252320..253060
/locus_tag="CD196_0208"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213259.1"
/db_xref="GI:260681974"
/db_xref="GeneID:8466195"
/translation="MDLRKLLEEVKNENIDIDFALEKLKDLPYEDLGYANIDHHRELR
NGYPEVIYCEGKSDEHILGIIDKMNQKSSNILGTRCRKETFLKIKEIYNHAEYEEASK
ILKIQNHDIENIGKGKIVIATGGTSDIPVADEAYHTAKFLGNDVDRIYDVGVAGIHRL
LNKRHKIDSARVIVAVAGMEGALASVIGGLVDVPVIAVPTSVGYGANFGGLAALLAML
NSCASGISVVNIDNGFGAGYLASMINKL"
misc_feature 252320..253057
/locus_tag="CD196_0208"
/note="NCAIR mutase (PurE)-related proteins [General
function prediction only]; Region: COG1691"
/db_xref="CDD:31877"
misc_feature 252668..253048
/locus_tag="CD196_0208"
/note="AIR carboxylase; Region: AIRC; smart01001"
/db_xref="CDD:198069"
gene 253144..254327
/locus_tag="CD196_0209"
/pseudo
/db_xref="GeneID:8463392"
gene 254709..256244
/gene="guaA"
/locus_tag="CD196_0211"
/db_xref="GeneID:8463393"
CDS 254709..256244
/gene="guaA"
/locus_tag="CD196_0211"
/note="[glutamine-hydrolyzing]; contains
glutamine-hydrolyzing domain and glutamine
amidotransferase; GMP-binding domain; functions to produce
GMP from XMP in the IMP pathway"
/codon_start=1
/transl_table=11
/product="GMP synthase"
/protein_id="YP_003213260.1"
/db_xref="GI:260681975"
/db_xref="GeneID:8463393"
/translation="MKHELVLVIDFGGQYNQLIARRVRENNVYCEILPCTASIERIKE
KNPKGIIFTGGPNSAYLEDSPTISKEIFELGVPILGICYGIQIMSHVLGGVVRKGNKQ
EKEYGKTSITYGKSSLFEGITTNSVWMSHTDLIEKVPEGFTIVANTNDCPVAAMENVE
RNLYGVQFHPEVEHCLEGDKILTNFLYNICKVKGDWTTDSFIEDKIKELKEKIGDKKA
LCALSGGVDSSVAAVLIHKAIGDNLTCIFVDHGLLRKNEGNDVERIFREKFDINLIRV
NAEDRFLSKLKGVSEPEAKRKIIGEEFIRVFEEESNKLGKMDFLVQGTIYPDVIESGH
GNAATIKSHHNVGGIPEDVDFQEIVEPLRELFKDEVRKIGLELGIEEGLIFRHPFPGP
GLGIRVIGDVTKEKCDILREADAVYMDELRKAGLYREIWQAFATLPDVKTVGVMGDER
TYAYLVGLRAVTSSDGMTSDWYKMPYDVLERISNRIINEVDGVNRVVYDITSKPPGTI
EWE"
misc_feature 254709..256241
/gene="guaA"
/locus_tag="CD196_0211"
/note="GMP synthase; Reviewed; Region: guaA; PRK00074"
/db_xref="CDD:178842"
misc_feature 254724..255266
/gene="guaA"
/locus_tag="CD196_0211"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in GMP synthetase; Region: GATase1_GMP_Synthase;
cd01742"
/db_xref="CDD:153213"
misc_feature order(254745..254750,254868..254876,254952..254957,
255096..255098,255213..255215)
/gene="guaA"
/locus_tag="CD196_0211"
/note="AMP/PPi binding site [chemical binding]; other
site"
/db_xref="CDD:153213"
misc_feature order(254871..254873,254955..254957)
/gene="guaA"
/locus_tag="CD196_0211"
/note="candidate oxyanion hole; other site"
/db_xref="CDD:153213"
misc_feature order(254952..254954,255213..255215,255219..255221)
/gene="guaA"
/locus_tag="CD196_0211"
/note="catalytic triad [active]"
/db_xref="CDD:153213"
misc_feature order(254964..254966,255099..255101,255207..255209)
/gene="guaA"
/locus_tag="CD196_0211"
/note="potential glutamine specificity residues [chemical
binding]; other site"
/db_xref="CDD:153213"
misc_feature 255360..256238
/gene="guaA"
/locus_tag="CD196_0211"
/note="The C-terminal domain of GMP synthetase. It
contains two subdomains; the ATP pyrophosphatase domain
which closes to the N-termial and the dimerization domain
at C-terminal end. The ATP-PPase is a twisted,
five-stranded parallel beta-sheet sandwiched...; Region:
GMP_synthase_C; cd01997"
/db_xref="CDD:30184"
misc_feature order(255360..255431,255435..255467,255471..255503,
255534..255647,255663..255707,255729..255758,
255771..255773,255777..255848,255864..255908)
/gene="guaA"
/locus_tag="CD196_0211"
/note="ATP Binding subdomain [chemical binding]; other
site"
/db_xref="CDD:30184"
misc_feature order(255369..255377,255381..255392,255444..255446,
255450..255452,255807..255809)
/gene="guaA"
/locus_tag="CD196_0211"
/note="Ligand Binding sites [chemical binding]; other
site"
/db_xref="CDD:30184"
misc_feature order(255933..255971,255996..256025,256032..256064,
256074..256121,256140..256166,256170..256238)
/gene="guaA"
/locus_tag="CD196_0211"
/note="Dimerization subdomain; other site"
/db_xref="CDD:30184"
gene 256783..258213
/locus_tag="CD196_0212"
/db_xref="GeneID:8466200"
CDS 256783..258213
/locus_tag="CD196_0212"
/codon_start=1
/transl_table=11
/product="membrane-associated nucleotidase"
/protein_id="YP_003213261.1"
/db_xref="GI:260681976"
/db_xref="GeneID:8466200"
/translation="MILNQIFIEDGGIMRNKIIIGITFSLVLLMSGCASKQTAEINVL
ATTDLHGVIPYELTSYVKEERKKDKNLTLVDAGDFFDSGEVFGSSMDSYFSARYKDGD
NNTESYIETPISKDMKEVGYDVAVLGNHEFISNNKFYLDNMISDFEKQKINILSANTY
KKNGDSYTKPYIIKNINTPEGNVKLGILGLTIKEVGERKQWKDGKLVDSKSLELKDQE
GYNGELYMNDLVEDAKKWVGIMEKEKPDIIVAVAHTGEKPKKPRNPGNRIQDLAQQVD
GIDAIVAGHNHVQIEQHDYKNKSGENVIVTEPGKHGEYISKINFKLEKNNDKWNIVDK
SSKLIKFEKNQESDKFGEFISSINKVSKDKKEIRLSEVKTPEWDKIYVFKSGTSADDI
YKTIGYKWRNISSPKGDDMVQIVVMNNNKPVSYIYGEAEVMPINIKCDESEYKNNVVT
IYPNKNDKFKIEKGKQEYSINLKHIQ"
misc_feature 256903..257799
/locus_tag="CD196_0212"
/note="metallophosphatase superfamily, metallophosphatase
domain; Region: MPP_superfamily; cl13995"
/db_xref="CDD:212351"
misc_feature 256909..257649
/locus_tag="CD196_0212"
/note="Calcineurin-like phosphoesterase; Region:
Metallophos; pfam00149"
/db_xref="CDD:201036"
misc_feature order(256924..256926,256930..256932,257014..257016,
257167..257172,257539..257541,257635..257637)
/locus_tag="CD196_0212"
/note="active site"
/db_xref="CDD:163614"
misc_feature order(256924..256926,256930..256932,257014..257016,
257167..257169,257539..257541,257635..257637)
/locus_tag="CD196_0212"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163614"
gene complement(258361..259236)
/locus_tag="CD196_0213"
/db_xref="GeneID:8463394"
CDS complement(258361..259236)
/locus_tag="CD196_0213"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213262.1"
/db_xref="GI:260681977"
/db_xref="GeneID:8463394"
/translation="MINIRYLEILEAIEQTGTFTGAAKKLHITQSAVSHAIAELEQQA
ETSLFDRLPRGVCLTRCGISLLDEARSILTACRNLDKKISRLEECTPINIVSSITIAS
FLLPPILSRLKNSFPSLKVNVRVESANSAMDILKSGEADICFWEGIEPQGAFRTILLG
SYKLCVACAPTFPLSEQTLSLRQLCTFPLLLREQGSAIRDTLDSVLSLSNQKAYPVWE
SVNSFALIKAAEAGLGITILPENLLLDSLLHKKLRLIELDEIDMENKMLAILHKDKNI
TQPLEIILDNISNVL"
misc_feature complement(258364..259233)
/locus_tag="CD196_0213"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(259051..259227)
/locus_tag="CD196_0213"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(258382..258963)
/locus_tag="CD196_0213"
/note="LysR substrate binding domain; Region:
LysR_substrate; pfam03466"
/db_xref="CDD:202651"
misc_feature complement(order(258544..258549,258553..258558,
258574..258591,258862..258882,258886..258888,
258898..258900,258907..258912,258916..258921))
/locus_tag="CD196_0213"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 259335..259919
/locus_tag="CD196_0214"
/db_xref="GeneID:8463395"
CDS 259335..259919
/locus_tag="CD196_0214"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213263.1"
/db_xref="GI:260681978"
/db_xref="GeneID:8463395"
/translation="MKRRRNILNQSRKIYFWLLIINLFISTFTFGGGYVVVPMIRRYF
VNQKQFFTEDDLMSMAAVAQSTPGAIAINLSALAGYRVAGTLGVVISCTAAIIPPLVI
LGLVSAFYTTFISNAIVTAVLKGMQAGVAALIVDLIIDMCSMILKQRSLFLSTMIPIA
FFANFVMSINVIFILSVCCFVCVMQVFYKKRENK"
misc_feature 259362..259865
/locus_tag="CD196_0214"
/note="Chromate transport protein ChrA [Inorganic ion
transport and metabolism]; Region: ChrA; COG2059"
/db_xref="CDD:32242"
misc_feature 259374..259868
/locus_tag="CD196_0214"
/note="Chromate transporter; Region: Chromate_transp;
pfam02417"
/db_xref="CDD:190304"
gene 260045..260482
/locus_tag="CD196_0215"
/db_xref="GeneID:8463396"
CDS 260045..260482
/locus_tag="CD196_0215"
/codon_start=1
/transl_table=11
/product="chromate transporter"
/protein_id="YP_003213264.1"
/db_xref="GI:260681979"
/db_xref="GeneID:8463396"
/translation="MFTDIITISQMTPGPLAVNTSTFVGLQIGGFWGAVAATLGCVLC
GVVISLFLYNFFQKHQNSTYIFEILNGLKSASLGLIISAAATIIILALFGTNKVYFNS
IFEMLNWTALIIFFVILLIVRKWKINPIVIIIISGILGIFFYL"
misc_feature <260048..>260257
/locus_tag="CD196_0215"
/note="Chromate transporter; Region: Chromate_transp;
pfam02417"
/db_xref="CDD:190304"
gene complement(260611..260847)
/locus_tag="CD196_0216"
/db_xref="GeneID:8463397"
CDS complement(260611..260847)
/locus_tag="CD196_0216"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213265.1"
/db_xref="GI:260681980"
/db_xref="GeneID:8463397"
/translation="MLECFIAEDSKIKDGVNIPTLVFKTLHDRYFKTQYFDSYYNSLK
CKKKLVEINNVHNSYYIDSEKFCQEAYDWFVENQ"
gene complement(261157..264585)
/locus_tag="CD196_0217"
/db_xref="GeneID:8463398"
CDS complement(261157..264585)
/locus_tag="CD196_0217"
/codon_start=1
/transl_table=11
/product="DNA repair protein"
/protein_id="YP_003213266.1"
/db_xref="GI:260681981"
/db_xref="GeneID:8463398"
/translation="MKINNYKNQSIITNPKKFENKYQDLPKTPIELLKVVQSLVIHGD
QGKLYGISFNKQQSDEELLRTIPQMLKRIFEINSNPLTIPRNPKQRLVGMCRDYSLLL
VSLLRYRGFEARMRAGFANYFENELTYEDHWLVEYYDTLTKRWIRIDAQIDDIQKNYF
QINFDTHDVGKTDGFLTGSEAWIRCRQGHAHPDDFGYNKNWKGWHSVKGNLLHDFNNM
IGLELLPWDLWTELSSKKYNQLTRAEKNLLDEMAEILSSGNIKIEDLNLLIEKLPEDY
LKSIFSQLKILGISEIKELGNPLELEKKFKFAKAINKSIKNSLCHNKSSIYLKGGRQN
NLKDVEVTIPKNQITVITGVSGSGKSSLAFDTIYEEGKRRYFENLGNGAKLSEQLQKP
EFDLLQGLTPTIAIEQKKGSQNPRSTVGTLTSIWDYLRMLFVSIGKSYCPYCKTPLEK
KNNTKNYCPHCQTIFSKINTSTFNANSHTGACHDCNGLGFTYQVNPQLIVKDPTISIL
DGATYYFGKLRGKKPNGNWMVGELYAIAKDKNIDLDIPWNELPRDFIDAILYGTDDKI
YEFSFESKGRESKIRRPASGAINHIQRLFRESSSENNTLHQYMNKIPCNTCGGELLCI
EARFTTIKGYRFPELTKMTIEQLWNWLCELPNQLQKNELSLVNDILTELKIRVSYLLK
VGLSYISTDRTAPTLSGGELQRVRLSSQLGSELVGLTYILDEPSIGLHPRDHNLIIKM
IEELRDKGNTVIVVEHDKDTILSADYIIDVGPNAGTKGGFIIAEGTTQEIIKNPNSIT
GKYLSTYNKISSQNKIIPSKWLSLKGCHANNLKNIDVEIPLNCMCSITGVSGSGKSSL
VFHSLLPALEEKLKQKSIPNKNYTALTGFDAIDDFILMDQTPIGKSSRSTPATYINIF
DEIRSLFTETPQAKQKLLDESYFSFNSKKGQCPNCQGLGKTKIILQYMADQWVTCNEC
QGKRYQKEILSIQYKGKTIADILDMEVAEAKTFFSDCSDIYRKLSLLDEVGLGYLKLG
QNTLGLSGGESQRIKLAKELGTKTKKRMLYILDEPTTGLHFKDIENLLITFRKLVNEQ
HSLLIIEHNTEVIRASDWIIDIGPDSGINGGEIVASGTPDEIKINPNSITGHFI"
misc_feature complement(<263275..263610)
/locus_tag="CD196_0217"
/note="ATP-binding cassette domain I of the excision
repair protein UvrA; Region: ABC_UvrA_I; cd03270"
/db_xref="CDD:213237"
misc_feature complement(262231..>262569)
/locus_tag="CD196_0217"
/note="ATP-binding cassette domain I of the excision
repair protein UvrA; Region: ABC_UvrA_I; cd03270"
/db_xref="CDD:213237"
misc_feature complement(261205..262128)
/locus_tag="CD196_0217"
/note="ATP-binding cassette domain II of the excision
repair protein UvrA; Region: ABC_UvrA_II; cd03271"
/db_xref="CDD:213238"
misc_feature complement(261280..262053)
/locus_tag="CD196_0217"
/note="AAA domain; Region: AAA_21; pfam13304"
/db_xref="CDD:205484"
gene 264904..267138
/locus_tag="CD196_0218"
/db_xref="GeneID:8463399"
CDS 264904..267138
/locus_tag="CD196_0218"
/codon_start=1
/transl_table=11
/product="signaling protein"
/protein_id="YP_003213267.1"
/db_xref="GI:260681982"
/db_xref="GeneID:8463399"
/translation="MKLSRYKKNSLVLSIILCSLIISILVITVFNTVKLHNISNKQSK
NYLNDVSTQIVMNVDSKIKFILSDLRIMADFIKQYEGDSRYEYLSKRKTSYKYYDVGI
IDLEGKAEFLSGKKFDLKNTASYKKGIEGKEYSEVIESMGFVLYSVPIFNDNHEVSSI
LIGVSNKESMDEILNIDSFNGEGTIEIINSQGKTLFIGKNNELIKDLSYKYKDSADEP
WAQKMLNDFKNDKSGNITITSSKGVQCLLTYHPITRGLNDWHFLLIVPEDVVLGELNK
LNSFTIIMTFITTCIIGIITLILYIIRRKYVNQIENIAYLDSITNGINSTKFSMLVKP
LISESPDSTYMMIAMNIKDFKLINDCFGSEKGNMTLKHLYNILYKNIDENEEFVCRHD
ADLFYLLIKNRPVLEALELLYKIEADTNYFNKNRENPYFLRLSVGIYTIENHNEDLIT
IQDHANTARKSFNKTHQSDFSFYSDIERKRLISEKEISNLMEKALENKEFFMCLQPKI
DIKSGKISGAESLVRWKNSEKGIIYPSNFIPLFEKSGFICKLDLYILEETCKLISKWI
KEGKEVLRISVNVSRQHLNDKLFLEKYKHICNKYNVPTCLIDLELTESIFLENPEAID
IIEDIHSNGFKCSIDDFGFGYSSLGILKDFKVDIIKLDRSFFVSKNNIDRGKVVIKSI
IELSKRLGMKVTAEGIEELEQVEFLKNVGCDYIQGYVFSKPLLISDFENFAYENNKIK
NIHY"
misc_feature 265810..266322
/locus_tag="CD196_0218"
/note="c-di-GMP synthetase (diguanylate cyclase, GGDEF
domain) [Signal transduction mechanisms]; Region:
COG2199"
/db_xref="CDD:32381"
misc_feature 265846..266277
/locus_tag="CD196_0218"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature order(265951..265953,266083..266085)
/locus_tag="CD196_0218"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(265966..265968,265975..265980,265990..265992,
266002..266004,266071..266073,266077..266088)
/locus_tag="CD196_0218"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(266056..266058,266143..266145)
/locus_tag="CD196_0218"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature 266368..267087
/locus_tag="CD196_0218"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene 267394..269424
/locus_tag="CD196_0219"
/db_xref="GeneID:8463400"
CDS 267394..269424
/locus_tag="CD196_0219"
/codon_start=1
/transl_table=11
/product="transcription antiterminator"
/protein_id="YP_003213268.1"
/db_xref="GI:260681983"
/db_xref="GeneID:8463400"
/translation="MISGRMLLIMNFLKGKNKTSYKDISKQLSIEERKVRYDINNLNI
VLRSLNKSVIQKMNKGVLIIPDDFQVVCINNNEYVFSLTERVSIMKIISMFKIDNLNL
EKLSKEFQVSRSSIKNDLNVLSSELERNQITITYDKSFKISGEEDLIYKQRLNILKSY
SYLFGKEKSDLSVFEKYLVNVIEKIFKGIYLIDIYNWSMNLLLQMGWTLNDESFTWYV
SNIFLFTWYIHSDEKHPLESASLSEPCFENKFDQEFETIIQKKLTKEQIFLLKSFVFF
TNKYASLNEDMDLISTEIIVQDLIYNMSEILEISFKEDMILYKGLLNHIAPLIERIKQ
NIQIYEELLHVIPDKYQYVLEATKVSIQKNRVLSQIKNENEIILLAIHFLGSIHRNER
NNYKNILLVCGFGYGVIAMLKDSLVNDYQINIVESIPSYKLQDYKEWESIDFIITTSK
IVIDLPKTIIEINPFLQEEDYLKFEEKGIKRKNVLTNYMSIKKRLDFLEEDAQKRVLS
IICQELGYSDERILFRQLNLSDLIGIDTIRIIDEDMKWEDAVKISSNILANCDFVSAQ
YAENIIDILKNVGFYAVKDNEFALLHGNDSSLVKVSSISLLICKEAVSFGDKKVKIIF
CLASRDKKEQIPAIINLTKMVYKTNFIAMLESAKTKEEAEVLIHKYEKEVTV"
misc_feature 267406..268800
/locus_tag="CD196_0219"
/note="Transcriptional antiterminator [Transcription];
Region: BglG; COG3711"
/db_xref="CDD:33506"
misc_feature 268282..268551
/locus_tag="CD196_0219"
/note="PRD domain; Region: PRD; pfam00874"
/db_xref="CDD:201484"
misc_feature 268579..268836
/locus_tag="CD196_0219"
/note="PTS_IIB_bgl_like: the PTS (phosphotransferase
system) IIB domain of a family of sensory systems composed
of a membrane-bound sugar-sensor (similar to BglF) and a
transcription antiterminator (similar to BglG) which
regulate expression of genes involved...; Region:
PTS_IIB_bgl_like; cd05568"
/db_xref="CDD:99910"
misc_feature order(268597..268608,268612..268620)
/locus_tag="CD196_0219"
/note="P-loop; other site"
/db_xref="CDD:99910"
misc_feature order(268597..268599,268603..268608,268615..268620)
/locus_tag="CD196_0219"
/note="active site"
/db_xref="CDD:99910"
misc_feature 268597..268599
/locus_tag="CD196_0219"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99910"
misc_feature 268984..269379
/locus_tag="CD196_0219"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cl00163"
/db_xref="CDD:206872"
misc_feature order(269113..269115,269167..269169)
/locus_tag="CD196_0219"
/note="active site"
/db_xref="CDD:29266"
misc_feature 269167..269169
/locus_tag="CD196_0219"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29266"
gene 269421..269873
/locus_tag="CD196_0220"
/db_xref="GeneID:8463401"
CDS 269421..269873
/locus_tag="CD196_0220"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIA"
/protein_id="YP_003213269.1"
/db_xref="GI:260681984"
/db_xref="GeneID:8463401"
/translation="MNKLVNVKCSFKIHANSKEEAIVSLVDVVSKEGYLIDKNQFLED
VLKREETLSTYIGHGIGLPHSQSVGVKNSCITIGKLDIPIEWTEEGEKVDLIFLISVT
KDNENNLHLKILSKLARLLMHESFRNQIRCSDEQTVYNLIKEKIEEED"
misc_feature 269451..269846
/locus_tag="CD196_0220"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cd00211"
/db_xref="CDD:29266"
misc_feature order(269562..269564,269610..269612)
/locus_tag="CD196_0220"
/note="active site"
/db_xref="CDD:29266"
misc_feature 269610..269612
/locus_tag="CD196_0220"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29266"
gene 269875..270930
/locus_tag="CD196_0221"
/db_xref="GeneID:8463402"
CDS 269875..270930
/locus_tag="CD196_0221"
/note="FrwC with FrwB, FrwD and PtsA forms a PEP-dependent
sugar phosphotransferase system permease which may
phosphorylate and transport sugars into the cell; forms
translocation channel and contains the specific
substrate-binding site"
/codon_start=1
/transl_table=11
/product="fructose-like permease EIIC subunit 2"
/protein_id="YP_003213270.1"
/db_xref="GI:260681985"
/db_xref="GeneID:8463402"
/translation="MRILKFLQKHLMTATSYMIPFVVAGGILFALSVTLSGQAAVPET
GWLAKLNQIGAAGLALFIPILGGYIAFSMADKPGLAPGMIGAYLAKEVNAGFIGGIIA
GFIAGFVVLQLKKIKLAPTMRTLGSIFIYPLIGTLITGGIIVFLIGEPIASFMTWMTN
WLNGMSGVSKIPLGGILGGMIASDMGGPINKVAATFAQTQVDTLPYLMGGVGVAICIP
PIGLGLATLLFPKKFSKEERDSGKASLLMGCVGITEGAIPFATSDPVRVIPCIMAGSI
IGNIMAFLLGCLNHAPWGGLIVLPVVDNRLGYIASVLTGAVVVAVLMKLVKKDVKEDE
EIEEDLDESIELIFEEL"
misc_feature 269875..270822
/locus_tag="CD196_0221"
/note="putative PTS system fructose-like transporter
subunit EIIC; Provisional; Region: PRK10478"
/db_xref="CDD:182490"
gene 270997..271305
/locus_tag="CD196_0222"
/db_xref="GeneID:8463403"
CDS 270997..271305
/locus_tag="CD196_0222"
/note="FrwB with FrwC, FrwD and PtsA forms a PEP-dependent
sugar phosphotransferase system (PTS) permease which may
phosphorylate and transport sugars into the cell;
cytoplasmic protein that interacts with complex EIIA;
contains the second phosphorylation site of the PTS"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit fructose-like
transporter subunit EIIB"
/protein_id="YP_003213271.1"
/db_xref="GI:260681986"
/db_xref="GeneID:8463403"
/translation="MKIVAVTSCPSGVAHTYMSAESLELSAKKFGIEIKVETQGSSGI
DNELSLKDIDEATCVILTNDVEIRNMERFKGKKVVRMSVSEIIKKSDALIKKIKDTFQ
"
misc_feature 271003..271287
/locus_tag="CD196_0222"
/note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of
the fructose-specific phosphoenolpyruvate:carbohydrate
phosphotransferase system (PTS). In this system, EII (also
referred to as FruAB) is a fructose-specific permease made
up of two proteins (FruA and...; Region: PTS_IIB_fructose;
cd05569"
/db_xref="CDD:99911"
misc_feature order(271021..271032,271036..271044)
/locus_tag="CD196_0222"
/note="P-loop; other site"
/db_xref="CDD:99911"
misc_feature order(271021..271023,271027..271032,271039..271044)
/locus_tag="CD196_0222"
/note="active site"
/db_xref="CDD:99911"
misc_feature 271021..271023
/locus_tag="CD196_0222"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99911"
gene 271409..272674
/locus_tag="CD196_0223"
/db_xref="GeneID:8463404"
CDS 271409..272674
/locus_tag="CD196_0223"
/codon_start=1
/transl_table=11
/product="sugar-phosphate kinase"
/protein_id="YP_003213272.1"
/db_xref="GI:260681987"
/db_xref="GeneID:8463404"
/translation="MKKLPIKTVVQRLLDLQEEGKSATLLGIGPMSPNLLQASFELAK
DDDFPLMFIASRNQVDADELGGGYVNGWNQETFTKDIKKIADKVGFDGLYYLCRDHGG
PWQRDKERNDHLSVDEAMELGKKSYLADIEAGFDLLMIDPTKDPFEIGKVIPLDVVLE
RTVELIEYCENERKRLNLPDIGYEVGTEETNGGLTSTETYETFITRLKVELDNRGLPM
PTFIVGQTGTLTRKTEQVGTFNFRNAYDLAQMAKKYGVGLKEHNGDYLDDVTLLEHIP
SQIIATNVAPQYGTEETRAYLKLAEVECKLEKEGLVDKTSNIRHVLLVNAIECGRWRK
WVVGEQKNLTTEEIFKNEVLSNEILDIAGHYTFNNDDVKKEIEVLYDNLSKNNIDGQR
FVVDHIKRPLRDYAECYNLKGVTTRILNK"
misc_feature 271421..>271999
/locus_tag="CD196_0223"
/note="Tagatose 6 phosphate kinase; Region:
Tagatose_6_P_K; cl09211"
/db_xref="CDD:209001"
gene 272762..273478
/locus_tag="CD196_0224"
/db_xref="GeneID:8463405"
CDS 272762..273478
/locus_tag="CD196_0224"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="YP_003213273.1"
/db_xref="GI:260681988"
/db_xref="GeneID:8463405"
/translation="MINLIFDVDDTLYNQLTPFYTAYNKVFSSIKDISIEDLYMSSRK
YSDEVFHMTENGEMPIKEMHIYRIMKAFEELGNSITEKDAQSFQDEYIYQQSQITLIP
EVERILNFSKERNINLGIITNGPSNHQRMKLKQLNIENWVDKSNIFISSEVGFSKPDT
NIFRVAENVMNLDRENTYYVGDSYRNDVLGAKKAGWKSIWLNHRGHEVEELFYKPDFV
ILEHKDLISLFIKICSYKNM"
misc_feature 272768..273445
/locus_tag="CD196_0224"
/note="Predicted hydrolase (HAD superfamily) [General
function prediction only]; Region: COG1011"
/db_xref="CDD:31215"
misc_feature 273026..273361
/locus_tag="CD196_0224"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature 273125..273127
/locus_tag="CD196_0224"
/note="motif II; other site"
/db_xref="CDD:119389"
gene complement(273673..273966)
/locus_tag="CD196_0225"
/db_xref="GeneID:8463406"
CDS complement(273673..273966)
/locus_tag="CD196_0225"
/codon_start=1
/transl_table=11
/product="spore coat protein"
/protein_id="YP_003213274.1"
/db_xref="GI:260681989"
/db_xref="GeneID:8463406"
/translation="MRNMIENLIKNNTYIDDKVIMLSMLSSAKASANMYLNSALTSST
PELRAIYSASLTQMVEGHTALTELSINKGWVKPYDKPIQQLTCSYKESQNVID"
misc_feature complement(273730..273921)
/locus_tag="CD196_0225"
/note="Coat F domain; Region: Coat_F; pfam07875"
/db_xref="CDD:203788"
gene complement(273972..274187)
/locus_tag="CD196_0226"
/db_xref="GeneID:8463407"
CDS complement(273972..274187)
/locus_tag="CD196_0226"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213275.1"
/db_xref="GI:260681990"
/db_xref="GeneID:8463407"
/translation="MRTLSETEKISLAAVIKMESDGLLMQRAINMLISDEDLKRQSES
SILATEGRIKAIQQFIVENEILISEEV"
gene complement(274732..275244)
/locus_tag="CD196_0227"
/db_xref="GeneID:8463408"
CDS complement(274732..275244)
/locus_tag="CD196_0227"
/codon_start=1
/transl_table=11
/product="nitroreductase"
/protein_id="YP_003213276.1"
/db_xref="GI:260681991"
/db_xref="GeneID:8463408"
/translation="MLEVIKNRRSIRTYIDKNIEEDKITEILKSAMQAPSSKNAQPWE
FIIVDDKELLKELSKSQHRAKHIEFAPLCIVVLGNRDKFLKPGKWIQDLGACTQNLLL
EVTNQGLAACWAGVFPKNKVVNKVKQILDLPVKLVPYALISIGYSEEKNEFIDRFDEN
KIHRNVYKNR"
misc_feature complement(274744..275241)
/locus_tag="CD196_0227"
/note="NAD(P)H:flavin oxidoreductase-like family 1. A
subfamily of the nitroreductase family containing
uncharacterized proteins that are similar to
nitroreductase. Nitroreductase catalyzes the reduction of
nitroaromatic compounds such as nitrotoluenes; Region:
NADPH_oxidoreductase_1; cd02150"
/db_xref="CDD:48395"
misc_feature complement(order(274897..274902,275131..275133,
275209..275211,275215..275217,275221..275223))
/locus_tag="CD196_0227"
/note="putative FMN binding site [chemical binding]; other
site"
/db_xref="CDD:48395"
gene 275694..276170
/gene="purE"
/locus_tag="CD196_0228"
/db_xref="GeneID:8463409"
CDS 275694..276170
/gene="purE"
/locus_tag="CD196_0228"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole carboxylase
catalytic subunit"
/protein_id="YP_003213277.1"
/db_xref="GI:260681992"
/db_xref="GeneID:8463409"
/translation="MKVAVVMGSKSDYPKLEEGIKLLEKYGIEVVARALSAHRTPEQL
SIFLKEIEDDTDVIIAAAGKAAHLPGVIASQTLIPVIGLPIKSSTMDGLDSLLSIVQM
PKGIPVATVTIDLGLNAALLALQIMTLKYPKLKEDLKSYREEMAQKVLEDDKNLRG"
misc_feature 275694..276140
/gene="purE"
/locus_tag="CD196_0228"
/note="AIR carboxylase; Region: AIRC; pfam00731"
/db_xref="CDD:144362"
gene 276176..276874
/gene="purC"
/locus_tag="CD196_0229"
/db_xref="GeneID:8466478"
CDS 276176..276874
/gene="purC"
/locus_tag="CD196_0229"
/note="catalyzes the formation of
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-
carboxamido)succinate from
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and
L-aspartate in purine biosynthesis; SAICAR synthase"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole-succinocarboxamide
synthase"
/protein_id="YP_003213278.1"
/db_xref="GI:260681993"
/db_xref="GeneID:8466478"
/translation="MLLYEGKAKQVYSTDNENEYVVYYKDDATAFNGEKKAEISSKGI
LNNKISTIIFEMLKENNINTHFIKSLSDREMLVKKVEILPLEVIVRNIAAGSICKRVG
LEEGVVFDEPIFEISYKNDAYGDPMLNDDYAVAMKLATREELKFLREETLKINELLKA
FFLKLNLKLVDFKIEFGKDSEGNIILADEVSPDTCRLWDVNTNEKLDKDRFRKDLGDL
VEGYTEVLSRMNNK"
misc_feature 276179..276871
/gene="purC"
/locus_tag="CD196_0229"
/note="phosphoribosylaminoimidazole-succinocarboxamide
synthase; Reviewed; Region: PRK09362"
/db_xref="CDD:181800"
misc_feature 276179..276868
/gene="purC"
/locus_tag="CD196_0229"
/note="bacterial and archaeal
5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide
(SAICAR) synthase; Region: SAICAR_synt_PurC; cd01415"
/db_xref="CDD:133470"
misc_feature order(276182..276187,276191..276196,276200..276202,
276206..276211,276233..276235,276239..276241,
276368..276370,276407..276409,276413..276415,
276419..276421,276530..276532,276698..276700,
276734..276739)
/gene="purC"
/locus_tag="CD196_0229"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:133470"
misc_feature order(276185..276187,276191..276202,276206..276208,
276233..276235,276269..276271,276371..276373,
276404..276415,276419..276421,276431..276433,
276437..276439,276443..276445,276455..276463,
276524..276526,276530..276532,276548..276550,
276686..276694,276698..276700,276737..276739,
276752..276763)
/gene="purC"
/locus_tag="CD196_0229"
/note="active site"
/db_xref="CDD:133470"
misc_feature order(276269..276271,276431..276433,276437..276439,
276443..276445,276455..276463,276524..276526,
276548..276550,276686..276694,276752..276763)
/gene="purC"
/locus_tag="CD196_0229"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133470"
gene 276886..278253
/gene="purF"
/locus_tag="CD196_0230"
/db_xref="GeneID:8466476"
CDS 276886..278253
/gene="purF"
/locus_tag="CD196_0230"
/codon_start=1
/transl_table=11
/product="amidophosphoribosyltransferase"
/protein_id="YP_003213279.1"
/db_xref="GI:260681994"
/db_xref="GeneID:8466476"
/translation="MCGVLGIYSNKDVTKELYYSLYSMQHRGQESCGLALLDDGEIKY
KKDMGLVGDVFKENELSKLKGNIGIGHVRYSTAGGSHVSNCQPLVGSCRKRQLAIAHN
GNLVNANYLKDMLEEDGYMFQTNSDTEVILYILARYYKGDIVESLKVTMDYIKGAYAL
VIMSQEELVAVRDPHGFRPLVLGKKGDEYIFASENCAIDILGGEVIRDVEPGEIIVVK
DGELKSYFYSENYKPVKKSCIFEHIYFARNDATIDNVNAYEFRIKCGERLAQNETVKA
DMVVPVPDSGWPGAIGYANASGLKISEGLVKNRYVGRTFIKPTQEEREIAVKIKLNPL
STIIKGKSIILVDDSIVRGTTSKQLVKSLREAGAKEIHLRITSPPVAYSCYYGIDTPN
RSKLIASSNNVEEMREYIGCDSLKFLDIEGMLDATEHKSTFCKACFDGEYPVKKIDKE
ELLSC"
misc_feature 276889..278214
/gene="purF"
/locus_tag="CD196_0230"
/note="amidophosphoribosyltransferase; Region: purF;
TIGR01134"
/db_xref="CDD:213588"
misc_feature 276889..277644
/gene="purF"
/locus_tag="CD196_0230"
/note="Glutamine amidotransferases class-II (GN-AT)_GPAT-
type. This domain is found at the N-terminus of glutamine
phosphoribosylpyrophosphate (Prpp) amidotransferase
(GPATase) . The glutaminase domain catalyzes amide
nitrogen transfer from glutamine to the...; Region:
GPATase_N; cd00715"
/db_xref="CDD:48479"
misc_feature order(276889..276891,276964..276969,277102..277104,
277189..277194,277264..277266)
/gene="purF"
/locus_tag="CD196_0230"
/note="active site"
/db_xref="CDD:48479"
misc_feature order(276937..276942,276949..276951,276970..276972,
277153..277155,277270..277272,277279..277284,
277291..277296)
/gene="purF"
/locus_tag="CD196_0230"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:48479"
misc_feature 277675..278013
/gene="purF"
/locus_tag="CD196_0230"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(277732..277734,277738..277740,277924..277932,
277936..277950)
/gene="purF"
/locus_tag="CD196_0230"
/note="active site"
/db_xref="CDD:206754"
gene 278247..279323
/gene="purG"
/locus_tag="CD196_0231"
/db_xref="GeneID:8466479"
CDS 278247..279323
/gene="purG"
/locus_tag="CD196_0231"
/codon_start=1
/transl_table=11
/product="phosphoribosylformylglycinamidine cyclo-ligase"
/protein_id="YP_003213280.1"
/db_xref="GI:260681995"
/db_xref="GeneID:8466479"
/translation="MLTYKESGVDIDEGNRAVDLIKGKIKGTYDGNVVGDLGNFSGLY
SLKDFVGMKEPVLLASTDGVGTKLKIAQMMDKHDTVGIDLVAMCVNDLICQGAKPLFF
LDYIALGKLVPEHIEKIVGGIADGCKMSGCALIGGETAEMPGMYGEDDYDLAGFSVGI
ADKEKIVSGNNVKSGDVLVGISSSGVHSNGFSFIRKIFLETYNYKMEQYVEELGMTVG
EALLTPTKIYVKLALDVLAKHDIKAIAHITGGGLIENITRVIPKGLGLDINKKSWEKP
PIFKMIEGFNAVDERELHKSFNMGIGLVLIVDKENADDVVNFINNRENDNAAYVDKKY
SELLEDKAYIIGEVVDSHEGVELC"
misc_feature 278250..279290
/gene="purG"
/locus_tag="CD196_0231"
/note="phosphoribosylaminoimidazole synthetase;
Provisional; Region: PRK05385"
/db_xref="CDD:180049"
misc_feature 278349..279293
/gene="purG"
/locus_tag="CD196_0231"
/note="PurM (Aminoimidazole Ribonucleotide [AIR]
synthetase), one of eleven enzymes required for purine
biosynthesis, catalyzes the conversion of
formylglycinamide ribonucleotide (FGAM) and ATP to AIR,
ADP, and Pi, the fifth step in de novo purine
biosynthesis; Region: PurM; cd02196"
/db_xref="CDD:100032"
misc_feature order(278364..278378,278412..278423,278427..278429,
278433..278435,278451..278453,278517..278519,
278529..278531,278547..278549,278556..278558,
278565..278567,278658..278660,278670..278672,
278676..278678,278697..278702,278712..278714,
279018..279020)
/gene="purG"
/locus_tag="CD196_0231"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100032"
misc_feature order(278517..278519,278652..278660)
/gene="purG"
/locus_tag="CD196_0231"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:100032"
gene 279317..279910
/gene="purN"
/locus_tag="CD196_0232"
/db_xref="GeneID:8466480"
CDS 279317..279910
/gene="purN"
/locus_tag="CD196_0232"
/codon_start=1
/transl_table=11
/product="phosphoribosylglycinamide formyltransferase"
/protein_id="YP_003213281.1"
/db_xref="GI:260681996"
/db_xref="GeneID:8466480"
/translation="MLNIGVLISGGGTNLQAVIDGTESGEIKGQVKVVISSKQGAYGL
ERAKNHNIKAICETDEDKIIEILKENKIDLVVLAGYLKIISPKLVNEFRNKMINIHPS
LIPSFCGAGFYGEKVHQGVIDYGAKVTGATVHFVDEGADTGPIIMQDVVKVNQDDDAK
TLAKRVLEVEHRILKESISLFCENKLKLQGRRVFINE"
misc_feature 279317..279901
/gene="purN"
/locus_tag="CD196_0232"
/note="phosphoribosylglycinamide formyltransferase;
Reviewed; Region: purN; PRK05647"
/db_xref="CDD:180182"
misc_feature 279323..279859
/gene="purN"
/locus_tag="CD196_0232"
/note="Phosphoribosylglycinamide formyltransferase (GAR
transformylase, GART); Region: FMT_core_GART; cd08645"
/db_xref="CDD:187714"
misc_feature order(279338..279340,279353..279361,279545..279568,
279581..279583,279608..279619,279656..279658,
279716..279718,279722..279727,279734..279739,
279824..279826)
/gene="purN"
/locus_tag="CD196_0232"
/note="active site"
/db_xref="CDD:187714"
misc_feature order(279353..279358,279548..279553,279611..279613,
279617..279619,279824..279826)
/gene="purN"
/locus_tag="CD196_0232"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187714"
misc_feature order(279545..279547,279554..279556,279560..279568,
279581..279583,279608..279610,279722..279727,
279734..279739)
/gene="purN"
/locus_tag="CD196_0232"
/note="cosubstrate binding site; other site"
/db_xref="CDD:187714"
misc_feature order(279608..279610,279614..279616,279737..279739)
/gene="purN"
/locus_tag="CD196_0232"
/note="catalytic site [active]"
/db_xref="CDD:187714"
gene 279903..281435
/gene="purH"
/locus_tag="CD196_0233"
/db_xref="GeneID:8466483"
CDS 279903..281435
/gene="purH"
/locus_tag="CD196_0233"
/note="involved in de novo purine biosynthesis"
/codon_start=1
/transl_table=11
/product="bifunctional
phosphoribosylaminoimidazolecarboxamide
formyltransferase/IMP cyclohydrolase"
/protein_id="YP_003213282.1"
/db_xref="GI:260681997"
/db_xref="GeneID:8466483"
/translation="MSKRALISVTDKTGVVEFAKELNKLDYEIISTGNTFKTLKENGV
NVMQVEDVTNFPEILDGRVKTLNPYIHGGILYKRDKESHVETVNEHKIHSIDLVAVNL
YDFEGTLKAGKSHDEIIENIDIGGPSMIRSAAKNYKDVIVVVDIKDYDSIIEKLKTDT
MTLEDRKKLSYKAFSTTGRYDALISSYFAGEVGDTYPDILNLTFQKEQTLRYGENPHQ
NGFLYSQSNAKNPILNYEQLGGKELSFNNLNDLHGCLEVMREFKDSEEVVSVAIKHAN
SCGVGLGKDAFEAYTKCYEADKVSIFGGIVGITSTIDKATAEKLNEIFLEIVVAYDFE
PEALEVLKQKKNLRILKLAKIEDSLQPYEMKYLDGKLLIQDRNNILAEKSENVTKAKP
TDAQLKDMEFGMRVVKNMKSNAIAIVKNGQTLALGCGQTSRIWALKNALENNKDKDFT
GAVLASDAFFPFDDCVTLAHEYGISAVVQPGGSIKDKDSIEACDKYDMVMVFTGIRHF
KH"
misc_feature 279903..281432
/gene="purH"
/locus_tag="CD196_0233"
/note="bifunctional
phosphoribosylaminoimidazolecarboxamide
formyltransferase/IMP cyclohydrolase; Provisional; Region:
purH; PRK00881"
/db_xref="CDD:179152"
misc_feature 279909..280466
/gene="purH"
/locus_tag="CD196_0233"
/note="Inosine monophosphate cyclohydrolase domain. This
is the N-terminal domain in the purine biosynthesis
pathway protein ATIC (purH). The bifunctional ATIC protein
contains a C-terminal ATIC formylase domain that
formylates...; Region: IMPCH; cd01421"
/db_xref="CDD:29633"
misc_feature order(279930..279932,279936..279938,279996..279998,
280005..280007,280092..280097,280203..280205,
280269..280271)
/gene="purH"
/locus_tag="CD196_0233"
/note="purine monophosphate binding site [chemical
binding]; other site"
/db_xref="CDD:29633"
misc_feature order(280065..280067,280074..280079,280086..280091,
280098..280106,280113..280118,280125..280127,
280266..280274,280281..280283,280293..280298,
280305..280307,280401..280403,280410..280418,
280440..280448,280452..280457,280464..280466)
/gene="purH"
/locus_tag="CD196_0233"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29633"
misc_feature order(280092..280094,280269..280271)
/gene="purH"
/locus_tag="CD196_0233"
/note="putative catalytic residues [active]"
/db_xref="CDD:29633"
misc_feature 280299..281228
/gene="purH"
/locus_tag="CD196_0233"
/note="AICARFT/IMPCHase bienzyme; Region: AICARFT_IMPCHas;
smart00798"
/db_xref="CDD:197879"
misc_feature <281241..281432
/gene="purH"
/locus_tag="CD196_0233"
/note="AICARFT/IMPCHase bienzyme; Region: AICARFT_IMPCHas;
cl03362"
/db_xref="CDD:198815"
gene 281446..282696
/gene="purD"
/locus_tag="CD196_0234"
/db_xref="GeneID:8466481"
CDS 281446..282696
/gene="purD"
/locus_tag="CD196_0234"
/codon_start=1
/transl_table=11
/product="phosphoribosylamine--glycine ligase"
/protein_id="YP_003213283.1"
/db_xref="GI:260681998"
/db_xref="GeneID:8466481"
/translation="MKILVVGGGGREHAICWKLSKEKNVEKVYCAPGNAGITNVAECV
NIGDTNIEELLKFAKENEIGLTIVGPEVPLVMGIVDEFEKEGLRVFGPNKKCAQLEGS
KAFSKEFMIKHNIPTAKYKEYTNLEEAISEIDSFGYPVVIKADGLAAGKGVVIPENRE
DAIATLKEMMSDKKFGAAGDKIVIEEFLKGIETSILAFVDNDTIVPMASAKDHKKVNN
YEQGPNTGGMGTFSPSEIYTEELANKVKETVLEKTLEGFKKDGLNFKGILFVGLMITE
DGEKVLEYNVRFGDPETQSVLFRLETDLHEIMETILDNKLKDIEINYSDDEAVCVMLT
SGGYPDSYEKGKIITGLENLDDDIVVFHSGTKMLDGNLVTNGGRVIGITAKSTTVKDA
AEKVYENIKKINFEGMHYRTDIGR"
misc_feature 281446..282690
/gene="purD"
/locus_tag="CD196_0234"
/note="phosphoribosylamine--glycine ligase; Provisional;
Region: PRK00885"
/db_xref="CDD:179154"
misc_feature 281446..281745
/gene="purD"
/locus_tag="CD196_0234"
/note="Phosphoribosylglycinamide synthetase, N domain;
Region: GARS_N; pfam02844"
/db_xref="CDD:202429"
misc_feature 281746..282324
/gene="purD"
/locus_tag="CD196_0234"
/note="Phosphoribosylglycinamide synthetase, ATP-grasp (A)
domain; Region: GARS_A; pfam01071"
/db_xref="CDD:201585"
misc_feature 282427..282693
/gene="purD"
/locus_tag="CD196_0234"
/note="Phosphoribosylglycinamide synthetase, C domain;
Region: GARS_C; pfam02843"
/db_xref="CDD:202428"
gene 282721..286527
/gene="purL"
/locus_tag="CD196_0235"
/db_xref="GeneID:8466477"
CDS 282721..286527
/gene="purL"
/locus_tag="CD196_0235"
/codon_start=1
/transl_table=11
/product="formylglycinamidine ribonucleotide synthetase"
/protein_id="YP_003213284.1"
/db_xref="GI:260681999"
/db_xref="GeneID:8466477"
/translation="MLNTENKDSMVRRVLVEKREGFDLEAKALKKDLVESLHIDNIEN
LRILNRYDVEGISEEVYENAAKTIFSEPNLDVVYYEEIPKLNDERVFAIEFLPGQYDQ
RGDWAAQCVQIVNQGIRPAINTAKVYILSGKITDEEFSKIKDYCINPVDSREASLEKP
ETLKMETEIPTTVEVLDGFIDLDENGLRTFVSEKGLAMTLGDLQHVQKYFKDTEKRNP
TITEIKVLDTYWSDHCRHTTFMTEIENVKIEDGKFNDIVKEAYQMYLNSRDNVYVNRH
KDICLMDIATVAVKELKKNGKLNDLDESEEINACSINVDVEVDGKMEKYLVMFKNETH
NHPTEIEPFGGAATCLGGAIRDPLSGRSYVYQAMRVTGSADPRTTLEDTLPGKLMQRK
ITTEAAHGYSSYGNQIGLTTGQVAEVYDENFVAKRMEIGAVIAAVPKENVVRERPEAG
DVIVLLGGKTGRDGCGGATGSSKEHSEESILTCSAEVQKGDAPNERKIQRFFRNKEVA
QMIKRCNDFGAGGVCVAIGEIADSLDINLDLVPKKYDGLDGTELAISESQERMAVAIK
KENKDKFIQLAVEENLEATHVATVTDTGYLRMFWNGKAIVDINREFLDTNGVKQTTDV
HVTKVDEENTFFSSNEIVKDVKCASMKDKFTKVLSDLNVCSQKGLVEMFDNTIGGNTV
LMPFGGKYQATPTQGMVAKIPVLGGETNTSTIMTYGYNPKVGKWSPFHGALYAVVESV
CKLVAIGGNYSTTRLTFQEYFEKLGNNPEKWGKPFSALLGAFYAQSKFEIPAIGGKDS
MSGTFKDIEVPPTLVSFAVDTVDAKKVVSPEFKKADSKVVMLCVNKAENDVVDFEELK
RNLDKVRELIHGNKVLSTYALGFAGVGEAISKMAFGNKIGFKFSEEAEKTFTDDKLFE
ASYGNIVLELANDDLCMLEGYNYVVLGSTTKEASIFIKGEELALDELYKAHCSTLEPI
FPTKTEEVKSKIETISYISQGEAKKSSLSIATPRVFIPAFPGTNCEYDSARAFERVGA
NANIRVFKNLTYKDIEDSIDTIVNEIKSSQIIMLPGGFSAGDEPDGSGKFIATVFRNP
RVQEAINEFLTQKDGLMLGICNGFQVLIKLGLVPYGEIRVPSESAPTLTYNNIGRHQA
KIARTRISSNKSPWLAQTNVGDIHNIAISHGEGKFVASEDVMRELIANGQVATQYVDF
NNEATYDIEFNPNGSFYAVEGITSADGRVFGKMGHSERIGEEVFKNIIGEKDQKIFES
GVKYFR"
misc_feature 282754..286521
/gene="purL"
/locus_tag="CD196_0235"
/note="phosphoribosylformylglycinamidine synthase, clade
II; Region: FGAM-synthase; TIGR01857"
/db_xref="CDD:130916"
misc_feature 283384..>283467
/gene="purL"
/locus_tag="CD196_0235"
/note="AIR (aminoimidazole ribonucleotide) synthase
related protein. This family includes Hydrogen
expression/formation protein HypE, AIR synthases, FGAM
(formylglycinamidine ribonucleotide) synthase and
Selenophosphate synthetase (SelD). The N-terminal
domain...; Region: PurM-like; cl10019"
/db_xref="CDD:214167"
misc_feature 283693..284544
/gene="purL"
/locus_tag="CD196_0235"
/note="PurL subunit of the formylglycinamide
ribonucleotide amidotransferase (FGAR-AT), first repeat.
FGAR-AT catalyzes the ATP-dependent conversion of
formylglycinamide ribonucleotide (FGAR) and glutamine to
formylglycinamidine ribonucleotide (FGAM), ADP; Region:
PurL_repeat1; cd02203"
/db_xref="CDD:100034"
misc_feature order(283696..283707,283711..283713,283786..283788,
283816..283818,283825..283827,283834..283836,
283966..283968,283999..284004,284014..284016)
/gene="purL"
/locus_tag="CD196_0235"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100034"
misc_feature order(283774..283776,283786..283788,283960..283968)
/gene="purL"
/locus_tag="CD196_0235"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100034"
misc_feature 284806..285549
/gene="purL"
/locus_tag="CD196_0235"
/note="PurL subunit of the formylglycinamide
ribonucleotide amidotransferase (FGAR-AT), second repeat.
FGAR-AT catalyzes the ATP-dependent conversion of
formylglycinamide ribonucleotide (FGAR) and glutamine to
formylglycinamidine ribonucleotide (FGAM), ADP; Region:
PurL_repeat2; cd02204"
/db_xref="CDD:100035"
misc_feature order(284854..284865,284869..284871,284944..284946,
284983..284985,284992..284994,285001..285003,
285106..285108,285148..285153,285163..285165)
/gene="purL"
/locus_tag="CD196_0235"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100035"
misc_feature order(284932..284934,284944..284946,285100..285108)
/gene="purL"
/locus_tag="CD196_0235"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100035"
misc_feature 285739..286512
/gene="purL"
/locus_tag="CD196_0235"
/note="Type 1 glutamine amidotransferase (GATase1)-like
domain found in Formylglycinamide ribonucleotide
amidotransferase; Region: GATase1_FGAR_AT; cd01740"
/db_xref="CDD:153211"
misc_feature order(285919..285924,285934..285936,286045..286047,
286057..286059,286243..286248,286429..286431,
286435..286446)
/gene="purL"
/locus_tag="CD196_0235"
/note="putative active site [active]"
/db_xref="CDD:153211"
misc_feature order(286045..286047,286435..286437,286441..286443)
/gene="purL"
/locus_tag="CD196_0235"
/note="catalytic triad [active]"
/db_xref="CDD:153211"
gene 286733..287605
/locus_tag="CD196_0236"
/db_xref="GeneID:8466482"
CDS 286733..287605
/locus_tag="CD196_0236"
/codon_start=1
/transl_table=11
/product="dtdp-4-dehydrorhamnose reductase"
/protein_id="YP_003213285.1"
/db_xref="GI:260682000"
/db_xref="GeneID:8466482"
/translation="MKILITGSNGQLGKELVSQLEAINQSINQPKYVILATTRNDLDI
SNQTNIDNFILHNKPDVIVNCAAYTKVDACEDNIEIAYKINALGVRNLAIASEKVNAK
LVHISTDYVFNGFSKYPYREDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYG
NGNNFVKTMIKLSLENKEVNVVNDQFGTPTSTVDLAKIIIRIMETEHYGVYHATCEGE
CSWYDFAKKIFELKNIDIKVNPIKSNEFKCKAQRPLYSVLDNFMLKLIGLNSFRKWEE
SIEEYLERYDINEK"
misc_feature 286736..287566
/locus_tag="CD196_0236"
/note="dTDP-6-deoxy-L-lyxo-4-hexulose reductase and
related proteins, extended (e) SDRs; Region:
dTDP_HR_like_SDR_e; cd05254"
/db_xref="CDD:187564"
misc_feature 286739..287587
/locus_tag="CD196_0236"
/note="RmlD substrate binding domain; Region:
RmlD_sub_bind; pfam04321"
/db_xref="CDD:113104"
misc_feature order(286751..286753,286757..286768,286844..286849,
286856..286867,286925..286933,286937..286939,
286982..286984,287048..287056,287126..287128,
287138..287140,287195..287206)
/locus_tag="CD196_0236"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187564"
misc_feature order(286985..286987,287054..287056,287126..287128,
287138..287140)
/locus_tag="CD196_0236"
/note="active site"
/db_xref="CDD:187564"
misc_feature order(287054..287056,287126..287128,287201..287203,
287237..287239,287273..287275,287291..287293)
/locus_tag="CD196_0236"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:187564"
gene 287714..288595
/locus_tag="CD196_0237"
/db_xref="GeneID:8463410"
CDS 287714..288595
/locus_tag="CD196_0237"
/EC_number="2.7.7.24"
/codon_start=1
/transl_table=11
/product="glucose-1-phosphate thymidylyltransferase"
/protein_id="YP_003213286.1"
/db_xref="GI:260682001"
/db_xref="GeneID:8463410"
/translation="MKGIILAGGSGTRLYPITKCISKQTLPIYDKPMIYYPMSVLMLA
GIQDILIISTPRDIKAFEELFGDGSSLGLKITYAIQEKANGIAEAFIIGEEFIGNDRV
SLVLGDNIFYGYGFSERLENAVKRKGATIFGYHVSNPNSFGVVEFDKDFNVLSIEEKP
TVPKSNYAIPGLYFYDNDVVEIAKLVEPSDRGELEITSINSEYLKRGKLKVELLGRGM
AWLDTGTHKGLLDASNYVEVVQTRQGLYIACLEEIAYTKGYISREQLMKLAKPLIKTE
YGQYLLKLASEDMQYGR"
misc_feature 287714..288430
/locus_tag="CD196_0237"
/note="G1P_TT_short is the short form of
glucose-1-phosphate thymidylyltransferase; Region:
G1P_TT_short; cd02538"
/db_xref="CDD:133019"
misc_feature 287717..288568
/locus_tag="CD196_0237"
/note="glucose-1-phosphate thymidylyltransferase, short
form; Region: rmlA; TIGR01207"
/db_xref="CDD:130274"
misc_feature order(287729..287731,287735..287740,287951..287953,
287960..287971,288035..288037,288140..288142,
288185..288190,288218..288220,288302..288304)
/locus_tag="CD196_0237"
/note="substrate binding site; other site"
/db_xref="CDD:133019"
misc_feature order(287747..287749,287756..287764,287771..287776,
287786..287794,287798..287809,287816..287818,
287891..287893,288047..288052,288113..288124,
288134..288139,288371..288379,288389..288394,
288401..288403,288410..288418,288425..288430)
/locus_tag="CD196_0237"
/note="tetramer interface; other site"
/db_xref="CDD:133019"
gene 288632..289189
/locus_tag="CD196_0238"
/db_xref="GeneID:8463411"
CDS 288632..289189
/locus_tag="CD196_0238"
/EC_number="5.1.3.13"
/codon_start=1
/transl_table=11
/product="dtdp-4-dehydrorhamnose 3,5-epimerase"
/protein_id="YP_003213287.1"
/db_xref="GI:260682002"
/db_xref="GeneID:8463411"
/translation="MGKINVIKTKIEGLYIVEPNVFCDERGYFMESYNKKDFIEQGLD
MCFIQDNESSSRKGVLRGMHFQVRYPQGKLVRVTEGEVFDVAVDLRKDSQTFGKWEGV
ILSDKNKKQFYIPEGFAHGFLVLSEKAVFNYKCTNYYYPEFEHGFIWNDKQISIEWPL
KGIEEIFLSEKDKKQKSFKDICIRR"
misc_feature 288647..289171
/locus_tag="CD196_0238"
/note="dTDP-4-dehydrorhamnose 3,5-epimerase; Region:
dTDP_sugar_isom; pfam00908"
/db_xref="CDD:144487"
gene 289227..290210
/locus_tag="CD196_0239"
/db_xref="GeneID:8463412"
CDS 289227..290210
/locus_tag="CD196_0239"
/codon_start=1
/transl_table=11
/product="dtdp-glucose 4,6-dehydratase"
/protein_id="YP_003213288.1"
/db_xref="GI:260682003"
/db_xref="GeneID:8463412"
/translation="MKKILITGGAGFIGSNFVHYMLNKYVDYFIVNLDLLTYAGNLET
LIEIQDSSNYKFVKGDISNREQMYKLFEEERFDIVVNFAAESHVDRSVENPDLFIKTN
IIGTQVLLDASIKYGVKRYHQISTDEVYGDLPIDRKDLFFTEQSPINPSSPYSASKAS
ADLLVSSYYRTYGLLTTISRCSNNYGPYHFPEKLIPLMILNALENKQLPVYGNGENVR
DWLHVYDHCTAIDLIIHKGNIGEIYNIGGHNERSNLEVVKMILNLLDKSEELISYVND
RPGHDLRYAIDATKIENELGWKAKYDFDLGIKETVKWYIENESWWKAVLSV"
misc_feature 289230..290204
/locus_tag="CD196_0239"
/note="dTDP-D-glucose 4,6-dehydratase [Cell envelope
biogenesis, outer membrane]; Region: RfbB; COG1088"
/db_xref="CDD:31285"
misc_feature 289230..290183
/locus_tag="CD196_0239"
/note="dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs;
Region: dTDP_GD_SDR_e; cd05246"
/db_xref="CDD:187557"
misc_feature order(289248..289250,289254..289265,289326..289337,
289341..289346,289401..289409,289470..289478,
289482..289484,289527..289529,289596..289604,
289686..289688,289698..289700,289767..289778)
/locus_tag="CD196_0239"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:187557"
misc_feature order(289482..289490,289602..289610,289686..289688,
289767..289775,289800..289808,289815..289820,
289851..289859,289872..289874,289878..289880,
289983..289985,290055..290057,290064..290066,
290076..290078)
/locus_tag="CD196_0239"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187557"
misc_feature order(289494..289496,289500..289502,289509..289514,
289521..289523,289533..289538,289545..289547,
289557..289559,289566..289568,289620..289622,
289659..289661,289665..289670,289674..289685,
289692..289694,289701..289706,289713..289718,
289725..289730,289734..289742,290067..290069)
/locus_tag="CD196_0239"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187557"
misc_feature order(289530..289532,289602..289604,289686..289688,
289698..289700)
/locus_tag="CD196_0239"
/note="active site"
/db_xref="CDD:187557"
gene 290186..290917
/locus_tag="CD196_0240"
/db_xref="GeneID:8463413"
CDS 290186..290917
/locus_tag="CD196_0240"
/codon_start=1
/transl_table=11
/product="transglycosylase"
/protein_id="YP_003213289.1"
/db_xref="GI:260682004"
/db_xref="GeneID:8463413"
/translation="MESCFISVTLKFIKFRKGRFILNEISSLINILALTQLSGSNTTN
QCNCTYNSSSGFDMIMMTLLKALSQNNQQTSNGYNLSSNSENLFDELGSVVNNTASRF
IDVDTKDKSVKSRIENAIEQASKKYNVDSNLIKAIIKVESDFNPNTVSSAGAKGLMQL
MPENCRDLGVTDPFNIEQNIDAGTRHIKEYIDMFGGSIEMGLMAYNGGPGRMKSRGVE
SISDLYKMPKETQNYIPKVMKYYRG"
misc_feature <290447..290908
/locus_tag="CD196_0240"
/note="Soluble lytic murein transglycosylase and related
regulatory proteins (some contain LysM/invasin domains)
[Cell envelope biogenesis, outer membrane]; Region: MltE;
COG0741"
/db_xref="CDD:31084"
misc_feature 290579..290911
/locus_tag="CD196_0240"
/note="Lytic Transglycosylase (LT) and Goose Egg White
Lysozyme (GEWL) domain. Members include the soluble and
insoluble membrane-bound LTs in bacteria, the LTs in
bacteriophage lambda, as well as, the eukaryotic
'goose-type' lysozymes (GEWL). LTs catalyze...; Region:
LT_GEWL; cd00254"
/db_xref="CDD:29556"
misc_feature order(290606..290608,290666..290668,290741..290743,
290798..290800)
/locus_tag="CD196_0240"
/note="N-acetyl-D-glucosamine binding site [chemical
binding]; other site"
/db_xref="CDD:29556"
misc_feature 290606..290608
/locus_tag="CD196_0240"
/note="catalytic residue [active]"
/db_xref="CDD:29556"
gene 290926..291354
/locus_tag="CD196_0241"
/db_xref="GeneID:8463414"
CDS 290926..291354
/locus_tag="CD196_0241"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213290.1"
/db_xref="GI:260682005"
/db_xref="GeneID:8463414"
/translation="MGINIDKLNISPSINMEVKKLKESNKFSDKLNSLKQSSSLEDIK
RNLESVKKAGERLVLTQNYGDISIYKNAVKEYLKSVVDNMYSLDKNSSFWEHQYYKNV
KIVDSKLEDMTSKLISEEKENIDIVSTVDMIQGLLIDMYR"
misc_feature 290926..291351
/locus_tag="CD196_0241"
/note="Protein of unknown function (DUF327); Region:
DUF327; pfam03885"
/db_xref="CDD:190781"
gene 291378..291692
/gene="fliN"
/locus_tag="CD196_0242"
/db_xref="GeneID:8463415"
CDS 291378..291692
/gene="fliN"
/locus_tag="CD196_0242"
/codon_start=1
/transl_table=11
/product="flagellar motor switch protein"
/protein_id="YP_003213291.1"
/db_xref="GI:260682006"
/db_xref="GeneID:8463415"
/translation="MNSKKEDIYELNFGQLIEEKSGVIEENQNVFNAKVNVAVSIGNT
TETIKNILDLKEGSIIKLSKNVDEKLDIYANDRLFAYGESIITNEKLSVRLSKIEDSD
VN"
misc_feature 291459..291683
/gene="fliN"
/locus_tag="CD196_0242"
/note="Surface presentation of antigens (SPOA); Region:
SpoA; pfam01052"
/db_xref="CDD:201573"
gene 291844..292119
/gene="flgM"
/locus_tag="CD196_0243"
/db_xref="GeneID:8466112"
CDS 291844..292119
/gene="flgM"
/locus_tag="CD196_0243"
/codon_start=1
/transl_table=11
/product="negative regulator of flagellin synthesis
(anti-sigma-d factor)"
/protein_id="YP_003213292.1"
/db_xref="GI:260682007"
/db_xref="GeneID:8466112"
/translation="MDIKNVSSNIVVNNYLKNTSGVKKVEEVKKINKTDKIELSKFAK
EMASVSNMSDENIRNKKVDEIKNALENGTYKIKPKEIAKKMIEDMRG"
misc_feature 291946..292110
/gene="flgM"
/locus_tag="CD196_0243"
/note="Anti-sigma-28 factor, FlgM; Region: FlgM;
pfam04316"
/db_xref="CDD:202970"
gene 292124..292540
/locus_tag="CD196_0244"
/db_xref="GeneID:8466096"
CDS 292124..292540
/locus_tag="CD196_0244"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein"
/protein_id="YP_003213293.1"
/db_xref="GI:260682008"
/db_xref="GeneID:8466096"
/translation="MITDLKVIIYEEKNIISKMMELLKEQFDYIVEKDLENLNMLNPK
LEDISRELASIEIKRRQLFGDDISMSEVVENSNDRYLKEIYTDLKHILALAKNQQESN
DSLIKKELIFTKKMINFIKPADKQTATYNSYGNIRK"
misc_feature 292133..292534
/locus_tag="CD196_0244"
/note="FlgN protein; Region: FlgN; pfam05130"
/db_xref="CDD:203170"
gene 292558..293868
/gene="flgK"
/locus_tag="CD196_0245"
/db_xref="GeneID:8463416"
CDS 292558..293868
/gene="flgK"
/locus_tag="CD196_0245"
/codon_start=1
/transl_table=11
/product="flagellar hook-associated protein"
/protein_id="YP_003213294.1"
/db_xref="GI:260682009"
/db_xref="GeneID:8463416"
/translation="MAGLFSILNTANSGMNAHQKAIQTISHNISNLDTDGYSRQRTEF
ATNSPMYMPSLSNSIARGQLGTGVHVTDVTRARNSFYDYQFRAEAHKYGNTVSKYDYY
NTIETIINEPSDYGISAGIDDFFKGWESLAKDINSDSKKSLVVENASNLATLISESYK
KLNKLKGDIDDNINSEIKQINDMLKSLEDLNKSIDVISGSGSTPNDLLDERDRILDDL
SFKLDLENSDVKNMLSDGKLELNELKNADGTWKTGVSGTLQGLFEMHGKIDTYKSDLK
DVSDGLAKQINDVYNTSAGITVTDFFITSNVDGEDIIKVNPAIKSNPNELKLTADEAS
KIAKLKDEKIDIGVAGGKVSTISDHYKAFAESVGLDSQKVNQDEVNQRKIINNIDNSR
MSVSGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVINGII"
misc_feature 292558..293859
/gene="flgK"
/locus_tag="CD196_0245"
/note="flagellar hook-associated protein FlgK; Validated;
Region: flgK; PRK07739"
/db_xref="CDD:181099"
misc_feature 292579..292668
/gene="flgK"
/locus_tag="CD196_0245"
/note="Flagella basal body rod protein; Region:
Flg_bb_rod; pfam00460"
/db_xref="CDD:109515"
misc_feature <293719..293856
/gene="flgK"
/locus_tag="CD196_0245"
/note="Flagellar basal body rod FlgEFG protein C-terminal;
Region: Flg_bbr_C; pfam06429"
/db_xref="CDD:203447"
gene 293887..294819
/gene="flgL"
/locus_tag="CD196_0246"
/db_xref="GeneID:8466094"
CDS 293887..294819
/gene="flgL"
/locus_tag="CD196_0246"
/codon_start=1
/transl_table=11
/product="flagellar hook-associated protein"
/protein_id="YP_003213295.1"
/db_xref="GI:260682010"
/db_xref="GeneID:8466094"
/translation="MRVSTGMMSSNYLNSLQDNLQRLDKVNRQVNTTKEINKLSDNPY
KAIKILNSKSEIKTMETYVENCKDTGNWLETTDTALDQLGKLLSDIKKTLVASGDGAY
SDDELKTLSNETNEKMKEIANALNATHEGKYIFSGSNTGVPPVECIDNADGSVSLKFN
SSLNLNKLNDSLSMDIAQGISVDYNVKLSSLGFDPTKTDPFEELNNISKKLANPDADA
IKELTTTCLGDMEQLIENTVNVRSIYGTKANTVEAMKEKNDDSLIQLKDILSQNEEID
YGEKLVQLKAAELTYQASLQTGGKLFNVSILDYI"
misc_feature 293887..294813
/gene="flgL"
/locus_tag="CD196_0246"
/note="flagellar hook-associated protein FlgL; Validated;
Region: flgL; PRK07701"
/db_xref="CDD:181087"
misc_feature 293893..294306
/gene="flgL"
/locus_tag="CD196_0246"
/note="Bacterial flagellin N-terminal helical region;
Region: Flagellin_N; pfam00669"
/db_xref="CDD:144315"
gene 294835..295227
/locus_tag="CD196_0247"
/db_xref="GeneID:8466095"
CDS 294835..295227
/locus_tag="CD196_0247"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213296.1"
/db_xref="GI:260682011"
/db_xref="GeneID:8466095"
/translation="MMKVTLKKGILGFENLKEYELLDIEDNDSLKEFNSTEEEGIGFV
VVSPFEIINEYEIVLNQETIEKLEVKSPKDVVLFNIITLGQTFEESTVNMKAPIVINI
KTNFGMQIILQDDKYSIRHPLLRGDNGC"
misc_feature 294847..295206
/locus_tag="CD196_0247"
/note="FliW protein; Region: FliW; pfam02623"
/db_xref="CDD:202316"
gene 295221..295433
/gene="csrA"
/locus_tag="CD196_0248"
/db_xref="GeneID:8463417"
CDS 295221..295433
/gene="csrA"
/locus_tag="CD196_0248"
/codon_start=1
/transl_table=11
/product="carbon storage regulator"
/protein_id="YP_003213297.1"
/db_xref="GI:260682012"
/db_xref="GeneID:8463417"
/translation="MLVISRKKDEAVLIGESIEVKIVGVDGNNVKLAISAPNNISILR
KEIYEKVKSENIKATNKNIKILKSLK"
misc_feature 295221..295382
/gene="csrA"
/locus_tag="CD196_0248"
/note="Global regulator protein family; Region: CsrA;
pfam02599"
/db_xref="CDD:202301"
gene 295455..295850
/gene="fliS1"
/locus_tag="CD196_0249"
/db_xref="GeneID:8465981"
CDS 295455..295850
/gene="fliS1"
/locus_tag="CD196_0249"
/codon_start=1
/transl_table=11
/product="flagellar protein FliS"
/protein_id="YP_003213298.1"
/db_xref="GI:260682013"
/db_xref="GeneID:8465981"
/translation="MYGENPYNSYKQNAVFMASKEQLLLMLVDGAVKYTKIARAAILD
KNTQKAHRELVRVQDIFTELMVTLDQNAGQWAKDMYKVYDFVRYELSRANIRKDIQVI
DNVLPVIEQIKDTWHEADKKSKEERSRYK"
misc_feature 295455..295838
/gene="fliS1"
/locus_tag="CD196_0249"
/note="Flagellin-specific chaperone FliS [Cell motility
and secretion / Intracellular trafficking and secretion /
Posttranslational modification, protein turnover,
chaperones]; Region: FliS; COG1516"
/db_xref="CDD:31705"
gene 295850..296206
/gene="fliS2"
/locus_tag="CD196_0250"
/db_xref="GeneID:8466116"
CDS 295850..296206
/gene="fliS2"
/locus_tag="CD196_0250"
/codon_start=1
/transl_table=11
/product="flagellar protein"
/protein_id="YP_003213299.1"
/db_xref="GI:260682014"
/db_xref="GeneID:8466116"
/translation="MELNLAELDKLSKEELLLMLVDGTVKYTNISKEALLNNDYLKAH
NELIRVQNIFTELMTTLDQDAGQWAKDMYKVYEFIKSELAIADENKDIKIIDDILPIV
KQIRDTWHEVYNQLKI"
misc_feature <295913..296191
/gene="fliS2"
/locus_tag="CD196_0250"
/note="Flagellar protein FliS; Region: FliS; cl00654"
/db_xref="CDD:207152"
gene 296227..297750
/gene="fliD"
/locus_tag="CD196_0251"
/db_xref="GeneID:8466117"
CDS 296227..297750
/gene="fliD"
/locus_tag="CD196_0251"
/codon_start=1
/transl_table=11
/product="flagellar cap protein"
/protein_id="YP_003213300.1"
/db_xref="GI:260682015"
/db_xref="GeneID:8466117"
/translation="MSSISPIRVTGLSGNFDMEGIIEASMIRDKEKVDKAKQEQQIVK
WKQEIYRNVIQESKDLYDKYLSVNSPNSIVSEKAYSSTRITSSDESIIVAKGSAGAEK
INYQFAVSQMAEPAKFTIKLNSSEPIVRQFPPNASGASSLTIGDVNIPISEQDTTSTI
VSKINSLCADNDIKASYSEMTGELIISRKQTGSSSDINLKVIGNDNLAQQIANDNGIT
FANDASGNKVASVYGKNLEADVTDEHGRVTHISKEQNSFNIDNIDYNVNSKGTAKLTS
VTDTEEAVKNMQAFVDDYNKLMDKVYGLVTTKKPKDYPPLTDAQKEDMTTEEIEKWEK
KAKEGILRNDDELRGFVEDIQSAFFGDGKNIIALRKLGINESENYNKKGQISFNADTF
SKALIDDSDKVYKTLAGYSSNYDDKGMFEKLKDIVYEYSGSSTSKLPKKAGIEKTASA
SENVYSKQIAEQERNISRLVEKMNDKEKRLYAKYSALESLLNQYSSQMNYFSQAQGN"
misc_feature 296245..297744
/gene="fliD"
/locus_tag="CD196_0251"
/note="flagellar capping protein; Validated; Region: fliD;
PRK07737"
/db_xref="CDD:181097"
misc_feature 296263..296577
/gene="fliD"
/locus_tag="CD196_0251"
/note="Flagellar hook-associated protein 2 C-terminus;
Region: FliD_N; pfam02465"
/db_xref="CDD:202247"
misc_feature 296923..297714
/gene="fliD"
/locus_tag="CD196_0251"
/note="Flagellar hook-associated protein 2 C-terminus;
Region: FliD_C; pfam07195"
/db_xref="CDD:115824"
gene 297753..298088
/locus_tag="CD196_0252"
/db_xref="GeneID:8466102"
CDS 297753..298088
/locus_tag="CD196_0252"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213301.1"
/db_xref="GI:260682016"
/db_xref="GeneID:8466102"
/translation="MDKLKEKLNLYKDISLQIINLIEKEEYIKISSKLGERQEIINSV
SEIDRNDFIQLYNRMELIEIDSRIRDILQGQLLEVKKELHEYKLTKQVNTMYYNLNRE
KVNIFNKKV"
misc_feature 297804..298040
/locus_tag="CD196_0252"
/note="Flagellar protein FliT; Region: FliT; pfam05400"
/db_xref="CDD:203244"
gene 298103..299062
/gene="fliC"
/locus_tag="CD196_0253"
/db_xref="GeneID:8463418"
CDS 298103..299062
/gene="fliC"
/locus_tag="CD196_0253"
/codon_start=1
/transl_table=11
/product="flagellin subunit"
/protein_id="YP_003213302.1"
/db_xref="GI:260682017"
/db_xref="GeneID:8463418"
/translation="MSDYINEELIKKIKSRNDKDVNYTKEGKIMRVNTNVSALIANNQ
MGRNVNAQSKSMEKLSSGVRIKRAADDAAGLAISEKMRAQIKGLDQAGRNVQDGISVV
QTAEGALEETGNILQRMRTLSVQSSNETNTAEERQKIADELLQLKDEVERISSSIEFN
GKKLLDGSSTEIRLQVGANFGTNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASL
NADGTSGTDAAKQMVSSLDVALKELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAES
RIRDTDVASEMVNLSKMNILVQASQSMLAQANQQPQGVLQLLG"
misc_feature 298190..299056
/gene="fliC"
/locus_tag="CD196_0253"
/note="flagellin; Provisional; Region: PRK12804"
/db_xref="CDD:183759"
misc_feature 298196..298612
/gene="fliC"
/locus_tag="CD196_0253"
/note="Bacterial flagellin N-terminal helical region;
Region: Flagellin_N; pfam00669"
/db_xref="CDD:144315"
misc_feature 298799..299056
/gene="fliC"
/locus_tag="CD196_0253"
/note="Bacterial flagellin C-terminal helical region;
Region: Flagellin_C; pfam00700"
/db_xref="CDD:144340"
gene 299077..301296
/locus_tag="CD196_0254"
/db_xref="GeneID:8466101"
CDS 299077..301296
/locus_tag="CD196_0254"
/codon_start=1
/transl_table=11
/product="glycosyltransferase"
/protein_id="YP_003213303.1"
/db_xref="GI:260682018"
/db_xref="GeneID:8466101"
/translation="MDIEERVRLCFTPFFFYKYTFERKIYMLLSIVMIVKNEEKILEK
TLKSLTTLRSSIESELIIVDTGSTDDTINISRKYTENVYFHNWNNDFSSMRNISISYA
KGEWLLILDADEILIDSSTIVKFFKDGLDKKFNSASIQLKNLYSYDKKLYGYCSVLRL
FKNIDFRYHGKVHEQPIYKNPIFNNVADFEHYGYLFEDEEIRLNKVKRNEKLLFEELK
ENDNSPYTNYQLGKNFIILGKYHEALYYLEKSYELYSKLESAPGYLITSLVKTYLYLG
KHKKCEKLCLKYIKKDMNNIDIYYYIAQAQVDLGKYENSIDSYKRYIYLLDNYEISTQ
ANSLFSDTDTVGLRDEAIITLIKIYYKLEKYESVISEYNNIEDMEKKKNVYFSLFMSL
YKLNRFEDIKNYYKEVSNSKIEKNSFYKNIEEVINNIKDDEKEHVYKILCDIEGNYGI
LNQIRINKCVSIDKCKEILNEEKEIIYAYIIKVAFEDKIDLLDIFYEMEYVWIEKYLK
YLLALERSFNLVLYKYIISRPNTSDIKKIRVYKAISKVVLESISLSDEKYKEIFYLYI
MYSYKYIRYIYRNLSDFELIKFVCNDLDKFTIEFKHLLDIKNKVNDANEKLEYIHSMR
KLLNEYPFYNKIIKILISELEENIKESEEFKDLKDSFIISIENMIETGKINDAKSLVD
DYSKTFMDDVKILNIKGILYMFENKLDKADFMLKKALSLDVENEDTIYNIEYLKSLR"
misc_feature 299161..>299694
/locus_tag="CD196_0254"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:212311"
misc_feature order(299176..299178,299182..299184,299263..299265,
299407..299409,299413..299415)
/locus_tag="CD196_0254"
/note="active site"
/db_xref="CDD:132997"
gene 301320..303197
/locus_tag="CD196_0255"
/db_xref="GeneID:8463419"
CDS 301320..303197
/locus_tag="CD196_0255"
/codon_start=1
/transl_table=11
/product="glycosyl transferase group 2 family protein"
/protein_id="YP_003213304.1"
/db_xref="GI:260682019"
/db_xref="GeneID:8463419"
/translation="MNTPIVVNEKSKDIIKDWQYTYTNEDIKFTSIIILTYNQIEYTK
LCIESIRKFTPKNKYEIIIIDNNSSDGTVEWLKGQSDIKSVYNNKNLGFPKGCNQGIE
LATGENILLLNNDVIVTPNWLYNLNKALWSQDNIGAVGPITNACSYYQQIDVDYKSIE
DMFMFAHKINTSNINLWKYRLKLVGFCMLIKKSVLDNVGVLDELFTPGNFEDDDLSFR
MLESGYKLLLCQDTFIHHFGSVSFKENRNKYTDIMYINRRKFETKWGFNPEYSGMIRT
DLISKIDDSLEANINVLEIGCGIGATLLEIKNIYKNASIYGIEISESAGKLAKYSADV
LIADIEKVKLDYEKDFFDYIILGDVLEHLTDPWKIVNELKQYLKKDGCLISSIPNIMH
VSVLRNLVLGNFTYEDSGILDKTHLRFFTLNEITKMFNDSNYIINSVTATSMPLSEID
NRFIDTMCKESCKEMRQQYESYQYIVKATKSIDTKRYSSISMVNLKYALMRIDNELDV
DSNLSYIFDNYNITEPCFVDDIEYLVDTFVINKATLLNRLGVEAFNRGLGDFSINMFM
TVLEMDRDDIDSIYNITSVLCELEEFDTAYNLIKNSSKKVQSESDIQDILYFIEGKRY
E"
misc_feature 301410..302165
/locus_tag="CD196_0255"
/note="Glycosyltransferases involved in cell wall
biogenesis [Cell envelope biogenesis, outer membrane];
Region: WcaA; COG0463"
/db_xref="CDD:30811"
misc_feature 301413..302033
/locus_tag="CD196_0255"
/note="Subfamily of Glycosyltransferase Family GT2 of
unknown function; Region: GT_2_like_c; cd04186"
/db_xref="CDD:133029"
misc_feature order(301515..301517,301659..301664)
/locus_tag="CD196_0255"
/note="Probable Catalytic site; other site"
/db_xref="CDD:133029"
misc_feature order(301662..301664,301953..301955,301959..301961)
/locus_tag="CD196_0255"
/note="metal-binding site"
/db_xref="CDD:133029"
misc_feature 302148..302627
/locus_tag="CD196_0255"
/note="Methyltransferase domain; Region: Methyltransf_23;
pfam13489"
/db_xref="CDD:205667"
misc_feature 302190..302480
/locus_tag="CD196_0255"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(302202..302222,302274..302279,302328..302336,
302388..302390)
/locus_tag="CD196_0255"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 303190..305304
/locus_tag="CD196_0256"
/db_xref="GeneID:8463420"
CDS 303190..305304
/locus_tag="CD196_0256"
/codon_start=1
/transl_table=11
/product="glycosyl transferase group 2 family protein"
/protein_id="YP_003213305.1"
/db_xref="GI:260682020"
/db_xref="GeneID:8463420"
/translation="MNNDKICFITCVNDERLYEECLVYINSLDIPKNFSIETVALRGA
DSIASAYNKAMRETDSKYKVYLHQDAFIINKNFIYDILEIFKKNTDVGMIGVAGVKDI
PVNGIWWDSDKKAGKVYDSHTGKMDIYEFSNFEECFNEVMAIDGLIMITQYDVFWRED
KFDGWHFYDLSQSMEFRQNKYKVIVPKQNKPWCMHDSGVANINNGYDEYRIKFVKEYI
NLDLYRENFYEFDKKKASTILKSNKHVMDCMKEELTEQLRLKNYKDVLDIVSKIAHFS
VFNHTGLYSCEKCERALLECANNLPEIENTKLFTKKDLKRRKVLHVLSEGYSTGGHTR
LVKNWIEIDKDSVHSVVTTWQSDTLPDWLLKAIDDSGGEVISLDLISDDYLKRAVALR
KIAYDWADIVILYVHMWDTIPVVAFGVDGKIPILHVNHYDSTFWLGTSIADIVIDFSE
ASQLITLDKRGIDKSEILPMPLKEKEVFSKSEVRKRYNLEDDVTIILTIASERKYNSV
NDINYFKIAKTLIENTDNTIIIVVGVDTENLYWKTLSNVTDNRVICFGTTANIDDFYK
ISDIYLESFMVGSHTSKLDAILYDLIPVKFKNEVSPIFTNMWNFIDKFDYKNIKEVID
MIRRYNTSEFDRDKIKEKQSEIKHFVIDKHCIEIKNYIDKIYKEANHHKVKYDLYKND
EIEDYQLFVALYGYMVKNKNMS"
misc_feature 303205..303840
/locus_tag="CD196_0256"
/note="Glycosyltransferase like family; Region:
Glyco_tranf_2_5; pfam13712"
/db_xref="CDD:205887"
gene 305313..306308
/locus_tag="CD196_0257"
/db_xref="GeneID:8463421"
CDS 305313..306308
/locus_tag="CD196_0257"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213306.1"
/db_xref="GI:260682021"
/db_xref="GeneID:8463421"
/translation="MNNIHINKFEKSCEKNWDYFVENKSINGTFLQTRNFLNYHEEGK
FTDHSLIIYKGEEILAVVPACETYENGERVFFSHLGSTFGGIIIRSGFNDIRHVNAIT
NKLETYLQEQSFNKVYLKNTSRIFCKEDTSLLEYFLFKNNYMFYDELSMFLELSKYKK
DILANFRYSKRRYFKYSLKNNLTFKRLYSDEDIVCFFNLLSNCLDSKGAKVIHSVEEL
LEFKNNRLKDIVEFYAVYIDDIMICGSMVFNFQERVYHTQYLASNSTYNKYYPMIFLY
YNLIKDALERNFKYLSFGISTLNRGKYLDEGLATFKEGFGSSAICNRTYYKNINK"
misc_feature 305802..306197
/locus_tag="CD196_0257"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_6; pfam13480"
/db_xref="CDD:205658"
gene 306400..307632
/locus_tag="CD196_0258"
/db_xref="GeneID:8463422"
CDS 306400..307632
/locus_tag="CD196_0258"
/codon_start=1
/transl_table=11
/product="carbamoyl-phosphate-synthetase"
/protein_id="YP_003213307.1"
/db_xref="GI:260682022"
/db_xref="GeneID:8463422"
/translation="MKRLMILGSIKYFENIVMSAKKEGIYTIVCDNRIDTPAKKICDE
AIDVDVFDFDKIKSIAIDKKIDGILTGFTDSLMKPYVYIANELNLPCVISCNQLESVT
NKAIMKKYFKNNAIPTTDYCIIESLKDLEKIQGLNFPLVIKPVDGYGSRGVYFVSNIE
ELIEKFEYSKEASQDGQVIIEEFYESEEIQGLAWVHNGESHVFYIGDRELVNIHTGRA
GKPDRLLYPSKYCFQYEEEIKSIYQNITQAFDIKNGPLYVQMLVGAYGIKVSEVMPRL
PGGCDYMAISQITDLDIGSLFANFSVNNEVNFDEIKKYNMHLSKCVYALPIYIRPGTI
KKINNIDKIENLDYVTQFLLLVKEGDTIGLYEDERQDCGRVYGIANNIFDANIKKKCI
HEMIEIFDENNENMIENF"
misc_feature 306700..307239
/locus_tag="CD196_0258"
/note="ATP-grasp domain; Region: ATP-grasp_4; pfam13535"
/db_xref="CDD:205713"
gene 307643..308596
/locus_tag="CD196_0259"
/db_xref="GeneID:8463423"
CDS 307643..308596
/locus_tag="CD196_0259"
/codon_start=1
/transl_table=11
/product="ornithine cyclodeaminase"
/protein_id="YP_003213308.1"
/db_xref="GI:260682023"
/db_xref="GeneID:8463423"
/translation="MIDMKLITHEQIMSLNISQKQGYEWIKESFLTKKDCQLPPKISM
VEEGHVFYNVMPSLNHNHMIGGIKMVTRLPGRNPSLNSDIFLYNMKDAKLKAILDGNY
ITAFRTAAVAGLAIDTFAKKDFNTISIMGLGVTASAIMNMLSYTLKDKNINIKLLKYK
DQAESFIKKYEKNEQFSFEICDTHEELIVDSDVVISTVTYTDEYLSEFKWFKKGALLL
PVHVMGFGNVDYLFDKVYLDDYNHLKHLENIDRYKYSCEFYNVLSKQAKGRENDDERI
ISYNIGLSIHDILFANKIYELCETLNCEEIELKEPKEKYWI"
misc_feature 307643..308530
/locus_tag="CD196_0259"
/note="Predicted ornithine cyclodeaminase, mu-crystallin
homolog [Amino acid transport and metabolism]; Region:
COG2423"
/db_xref="CDD:32552"
misc_feature <307925..308530
/locus_tag="CD196_0259"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene 309175..310275
/locus_tag="CD196_0260"
/db_xref="GeneID:8463424"
CDS 309175..310275
/locus_tag="CD196_0260"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213309.1"
/db_xref="GI:260682024"
/db_xref="GeneID:8463424"
/translation="MNLLLVKFNNLLKQFQTHKEEYEQKIKDVMESGYYILGNEVRHF
EEEFASYVGSKYCVGLASGLDALIIAFRALGISEGDEVIVQSNTYIASVMGISINGAT
PVFVEPNEYYNIDSSKIEEKINSKTKAILVVHLYGQASKMKDIQELCDKYNLYLIEDC
AQSHGAKYDGKMTGTFGDIGCFSFYPSKNLGAFGDAGAIVTSNEEIADKVKILRNYGS
EKRYYNKFVGYNSRLDEIQAGLLRVKLKYLNEIEIEKSKIVDRYLNEINNPKVILPKI
ENNCTHVWHLFVLQVEKRDTFMEYLKKNGIESIIHYPIPPHLSEAYAYLGYKKGSFNI
AENYSDKVVSIPLFVGMEDEEVSYIIKIINEY"
misc_feature 309232..310266
/locus_tag="CD196_0260"
/note="DegT/DnrJ/EryC1/StrS aminotransferase family;
Region: DegT_DnrJ_EryC1; pfam01041"
/db_xref="CDD:201569"
misc_feature 309238..310266
/locus_tag="CD196_0260"
/note="3-amino-5-hydroxybenzoic acid synthase family
(AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate
(PLP)-dependent aspartate aminotransferase superfamily
(fold I). The members of this CD are involved in various
biosynthetic pathways for secondary...; Region: AHBA_syn;
cd00616"
/db_xref="CDD:99740"
misc_feature order(309361..309366,309649..309651,309658..309660,
309721..309723,309733..309738,310105..310107)
/locus_tag="CD196_0260"
/note="inhibitor-cofactor binding pocket; inhibition site"
/db_xref="CDD:99740"
misc_feature order(309361..309366,309436..309438,309649..309651,
309658..309660,309721..309723,309736..309738)
/locus_tag="CD196_0260"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99740"
misc_feature 309736..309738
/locus_tag="CD196_0260"
/note="catalytic residue [active]"
/db_xref="CDD:99740"
gene 311081..311398
/gene="flgB"
/locus_tag="CD196_0261"
/db_xref="GeneID:8463425"
CDS 311081..311398
/gene="flgB"
/locus_tag="CD196_0261"
/codon_start=1
/transl_table=11
/product="flagellar basal-body rod protein"
/protein_id="YP_003213310.1"
/db_xref="GI:260682025"
/db_xref="GeneID:8463425"
/translation="MNTYDIIKMGLDATNLRSQTIANNIANINTEGYKRHYVTFEETL
NDAMPKIEEKTDNSKGLRVDGNNVDIEEEKVNQAMATLQYNALISFANGKIAMTKSII
SGR"
misc_feature 311087..311389
/gene="flgB"
/locus_tag="CD196_0261"
/note="flagellar basal body rod protein FlgB; Provisional;
Region: flgB; PRK12623"
/db_xref="CDD:183630"
gene 311424..311810
/gene="flgC"
/locus_tag="CD196_0262"
/db_xref="GeneID:8466089"
CDS 311424..311810
/gene="flgC"
/locus_tag="CD196_0262"
/codon_start=1
/transl_table=11
/product="flagellar basal-body rod protein"
/protein_id="YP_003213311.1"
/db_xref="GI:260682026"
/db_xref="GeneID:8466089"
/translation="MRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFE
ENYDNKLGMLGVKVTSVEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITA
SRAYDSNVDTLNAQKSMISKALEIGK"
misc_feature 311424..311807
/gene="flgC"
/locus_tag="CD196_0262"
/note="flagellar basal body rod protein FlgC; Reviewed;
Region: flgC; PRK05681"
/db_xref="CDD:180197"
misc_feature 311424..311510
/gene="flgC"
/locus_tag="CD196_0262"
/note="Flagella basal body rod protein; Region:
Flg_bb_rod; pfam00460"
/db_xref="CDD:109515"
misc_feature <311670..311801
/gene="flgC"
/locus_tag="CD196_0262"
/note="Flagellar basal body rod FlgEFG protein C-terminal;
Region: Flg_bbr_C; pfam06429"
/db_xref="CDD:203447"
gene 311820..312137
/gene="fliE"
/locus_tag="CD196_0263"
/db_xref="GeneID:8466090"
CDS 311820..312137
/gene="fliE"
/locus_tag="CD196_0263"
/note="forms a junction between the M-ring and FlgB during
flagella biosynthesis"
/codon_start=1
/transl_table=11
/product="flagellar hook-basal body protein FliE"
/protein_id="YP_003213312.1"
/db_xref="GI:260682027"
/db_xref="GeneID:8466090"
/translation="MPITQINNLMQGAKLDNLIGETKPLTLNNKEEKKNFEDVIIDTI
DKVNFQQVTADDMKEKFIKGEDVSMHEVMLIGQEAQLSMQYLIEVRNKIHDAYQEMNK
VQI"
misc_feature 311829..312134
/gene="fliE"
/locus_tag="CD196_0263"
/note="flagellar hook-basal body protein FliE;
Provisional; Region: fliE; PRK12728"
/db_xref="CDD:183706"
gene 312162..313712
/gene="fliF"
/locus_tag="CD196_0264"
/db_xref="GeneID:8466103"
CDS 312162..313712
/gene="fliF"
/locus_tag="CD196_0264"
/note="the MS-ring anchors the flagellum to the
cytoplasmic membrane; part of the flagellar basal body
which consists of four rings L, P, S, and M mounted on a
central rod"
/codon_start=1
/transl_table=11
/product="flagellar MS-ring protein"
/protein_id="YP_003213313.1"
/db_xref="GI:260682028"
/db_xref="GeneID:8466103"
/translation="MIASFKNKIKEQVAKSRTKISSLKKGTKIALGIGVIAICLALVF
TAISASKNKYAVLFSELDVQDAADISAELESKKIDTKVKGSTIYVPRTEVDKLRLELA
PSLTGGSKGFALMDDSSSIGLTDEEFQIKKQRMIQGEIEKTIKSFPQVEDTRVHITFG
ESSVFEKEAIPGSAAVYLMLKPGTTLEKNQIKSVMALISGSVTNIPEKNVQVIDNKMN
LLSEGILEDEDVDENNQPTNSLINVDKNKASEQALNKQLEKSILEMLEPIFGKGKVKA
TVNADLSFDTAEKTEIKIDPDKVAIKETRSKNSSKSATNNVQGVDANMNNQGNNNGTN
TEDSLDESFEYETGKIETHTIVAPGELNRLTASVAIDGKIAKGVQADVEDIVNNAIGM
DGARGDTLSVVSMVFDPEGKAEAKQELEEIKKEGFKKNIIKAVIGVVAVVAIGAIGYL
IYKKRSEREDMDYEDEDYISKSDSVDRKDNPLLGDDPELTLEEAVKMYAEEKPDQVTE
IIKTWLNE"
misc_feature 312177..313709
/gene="fliF"
/locus_tag="CD196_0264"
/note="flagellar MS-ring protein; Reviewed; Region: fliF;
PRK06007"
/db_xref="CDD:180348"
misc_feature 312246..312827
/gene="fliF"
/locus_tag="CD196_0264"
/note="Secretory protein of YscJ/FliF family; Region:
YscJ_FliF; cl01907"
/db_xref="CDD:199376"
misc_feature 312954..313382
/gene="fliF"
/locus_tag="CD196_0264"
/note="Flagellar M-ring protein C-terminal; Region:
YscJ_FliF_C; pfam08345"
/db_xref="CDD:192009"
gene 313725..314795
/gene="fliG"
/locus_tag="CD196_0265"
/db_xref="GeneID:8466104"
CDS 313725..314795
/gene="fliG"
/locus_tag="CD196_0265"
/codon_start=1
/transl_table=11
/product="flagellar motor switch protein"
/protein_id="YP_003213314.1"
/db_xref="GI:260682029"
/db_xref="GeneID:8466104"
/translation="MSTEITNVNAFDLSDINESDKKEKIEGEGLKKAAVLLMTLGPNV
SSDIIKSLPDKQVQKIGLEIANISSIASKERREILKEFVEINRAKDYVIEGGLEYARE
LLSNALGNAKANKLLEGISINTSTKPFKHIIKLDVKKILEILRDESAQTIAVLLAHME
PENGAEVLSYLDFDLQNEVAMRISSMGSISPEVIKVIESSLEDKLHSISGDDFKDYGG
VSTLVQILINSDRKTEKNILGTIEEQDPALAAQIKSHIFVFEDIVKLDDISIQKVLKE
VTMKDLVYALKGVDDEISDAIYRNQSSRAADALKEEMEMVGVIKVTQVEAAQQKIANI
VRKLEREGAITIVRNFGGDFVE"
misc_feature 313821..314762
/gene="fliG"
/locus_tag="CD196_0265"
/note="flagellar motor switch protein G; Validated;
Region: fliG; PRK05686"
/db_xref="CDD:180201"
misc_feature 314436..314762
/gene="fliG"
/locus_tag="CD196_0265"
/note="FliG C-terminal domain; Region: FliG_C; pfam01706"
/db_xref="CDD:190075"
gene 314776..315519
/gene="fliH"
/locus_tag="CD196_0266"
/db_xref="GeneID:8466105"
CDS 314776..315519
/gene="fliH"
/locus_tag="CD196_0266"
/codon_start=1
/transl_table=11
/product="flagellar assembly protein"
/protein_id="YP_003213315.1"
/db_xref="GI:260682030"
/db_xref="GeneID:8466105"
/translation="MVTLLNNKIIKSKKASYKGVLDLTIIDKVRVGESNVNKENDCRF
RDEVIKEAIESAEIKKNEILEEAKMNAQNIEKQAYEKGYSQGQKNGYEDGYKESYDEY
TQKAKDEADFIKNQADLILLQANEKMTEYIKEKNKEIVRLAINMASSVLKKHFEDEES
MSDLLKQIIQDYEGSSSFIVRCNSFYKDNIEKEFELFKEETSLKSSVFVIADDSIDKG
NAIIQKENGRIIVGIDCAMEKLKEELLGE"
misc_feature 314896..315516
/gene="fliH"
/locus_tag="CD196_0266"
/note="Flagellar biosynthesis/type III secretory pathway
protein [Cell motility and secretion / Intracellular
trafficking and secretion]; Region: FliH; COG1317"
/db_xref="CDD:31508"
gene 315523..316842
/gene="fliI"
/locus_tag="CD196_0267"
/db_xref="GeneID:8466106"
CDS 315523..316842
/gene="fliI"
/locus_tag="CD196_0267"
/codon_start=1
/transl_table=11
/product="flagellum-specific ATP synthase"
/protein_id="YP_003213316.1"
/db_xref="GI:260682031"
/db_xref="GeneID:8466106"
/translation="MYKTDISIDFDKINKKIENLELTISEGRVKKIIGLTVEVEGIKA
FVGELCVIYNQVNKPVNCEVVGFKDKEVILMALGELTLIAPGCKVISKGIPLSVMCSD
NLLGKVLDGLGNPIDNSDAVLGDRYNLNNEPPDPMKRKKIRNIMETGVRAIDAFTTCG
EGQRIGIFAGSGVGKSTTLGMIARNAKADVNVIALIGERGREVLDFIDKDLGEEGMKK
SVVVCATSDKAPLVRLKGALTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVGIAIG
EPPAQKGYTPSVFAILPKLMERTGTSDKGSITAFYTVLVDGDDFNEPIADTTRGILDG
HIVLSRDLANKNHYPSIDVLNSLSRLMNEIASKEDIKIASFARDMLAEYREAEDLINI
GAYASGTNKKIDEAIYYHEHIINFLKQGINEKSSFNETISSLRRIFE"
misc_feature 315601..316836
/gene="fliI"
/locus_tag="CD196_0267"
/note="flagellar protein export ATPase FliI; Region:
FliI_clade2; TIGR03497"
/db_xref="CDD:211826"
misc_feature 315607..315801
/gene="fliI"
/locus_tag="CD196_0267"
/note="ATP synthase alpha/beta family, beta-barrel domain;
Region: ATP-synt_ab_N; pfam02874"
/db_xref="CDD:145823"
misc_feature 315805..316779
/gene="fliI"
/locus_tag="CD196_0267"
/note="Flagellum-specific ATPase/type III secretory
pathway virulence-related protein. This group of ATPases
are responsible for the export of flagellum and
virulence-related proteins. The bacterial flagellar motor
is similar to the F0F1-ATPase, in that they...; Region:
ATPase_flagellum-secretory_path_III; cd01136"
/db_xref="CDD:30002"
misc_feature 316030..316050
/gene="fliI"
/locus_tag="CD196_0267"
/note="Walker A motif/ATP binding site; other site"
/db_xref="CDD:30002"
misc_feature 316285..316299
/gene="fliI"
/locus_tag="CD196_0267"
/note="Walker B motif; other site"
/db_xref="CDD:30002"
gene 316874..317320
/gene="fliJ"
/locus_tag="CD196_0268"
/db_xref="GeneID:8466107"
CDS 316874..317320
/gene="fliJ"
/locus_tag="CD196_0268"
/codon_start=1
/transl_table=11
/product="flagellar protein"
/protein_id="YP_003213317.1"
/db_xref="GI:260682032"
/db_xref="GeneID:8466107"
/translation="MELDKNFKFRLQKVLDLKIKDEEEIKMEFAKIQQKKIDIESNLE
NLESNYSKYSISKNNDSVQNQKITINYLLALNNSIMDLSEELDKSTNELEKARKQLIS
KQIERKSLEKLKEKKYGQYYKEEQLKEQSTNDEFASMSYLRNRQVL"
gene 317348..318553
/gene="fliK"
/locus_tag="CD196_0269"
/db_xref="GeneID:8466108"
CDS 317348..318553
/gene="fliK"
/locus_tag="CD196_0269"
/codon_start=1
/transl_table=11
/product="flagellar hook-length control protein"
/protein_id="YP_003213318.1"
/db_xref="GI:260682033"
/db_xref="GeneID:8466108"
/translation="MKIQADSYNIIKDIGNRKSSSKNKNIKNNKFEDNLYKATDHKKV
KDRRETSKQNVSSDKRENSDNECHLDEDKSNHLEDENTYEKDCSNNNEALHQLLNLLK
DNYKKDKDINTILNNLKKLSISDELKQELKLNKNILNKIANQNLELNRASTNNPNDIE
NLDIMKLRELLENNASEDIEVISKTTENDTKSIDLYSFDSNRIDTLNSNKQKDDSSDI
LEKLAGVNGNKSGNFGQVINKSVDMNKIKNDNVNLKQIESNVMDDSIKAIKHMKTNDI
QELTIKLRPKELGDMNIQLLKDGESMRAVVTVFNKDVFDSINKNIADLKQHLELTNVN
IKDVSVQMHSDNTNTSDTFDKAFEQQNRQNNQENMSKQNTNDKRNNVVIEDEIKENII
DDDRVDLLA"
misc_feature 318143..318379
/gene="fliK"
/locus_tag="CD196_0269"
/note="Flagellar hook-length control protein FliK; Region:
Flg_hook; pfam02120"
/db_xref="CDD:202116"
gene 318571..319179
/gene="flgD"
/locus_tag="CD196_0270"
/db_xref="GeneID:8466109"
CDS 318571..319179
/gene="flgD"
/locus_tag="CD196_0270"
/codon_start=1
/transl_table=11
/product="basal-body rod modification protein"
/protein_id="YP_003213319.1"
/db_xref="GI:260682034"
/db_xref="GeneID:8466109"
/translation="MYGIATALAGTQVNYRSNNLSQLERNINDIANKQVRSKGNQTVT
DNGTPIIGQGDDADKDLFMKILVAQMGNQDPMNPQDPTEYVSQLAQFATLEKMSAMND
KLDILLALSNSTLINSALSMATSLIGKEVEVSGEEEEDENIVGVVKSTYIKDGEVHLE
LEVDGSDKTVGVKYEKLLKIGEVDANSGEENDSSEQESPEEV"
misc_feature <318724..318891
/gene="flgD"
/locus_tag="CD196_0270"
/note="Flagellar hook capping protein - N-terminal region;
Region: FlgD; pfam03963"
/db_xref="CDD:202834"
gene 319206..320189
/gene="flgE"
/locus_tag="CD196_0271"
/db_xref="GeneID:8466091"
CDS 319206..320189
/gene="flgE"
/locus_tag="CD196_0271"
/codon_start=1
/transl_table=11
/product="flagellar hook protein"
/protein_id="YP_003213320.1"
/db_xref="GI:260682035"
/db_xref="GeneID:8466091"
/translation="MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDS
FYQTVLYASAPTAALGGTNLGQVGVGSKISSINKDMTQGNVQPTNRPSDLMIDGDGYL
PVVRQGTVMYTRDGSFNLDTGFKAADGALKNIKGGRLVNGDGYMLQGVIYDGEYKADT
GEFIKKGDAKGKEPIVIPLQSISPKDGTVQNVLEYNISKDGTVEFLLSDGQRTQFVYD
IPDGAKVGDTPAGIDKLKGTIQKVQTYAFQNPAGLDAEGGNLFKPSANSGDPQIAGAT
GNIIQGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIINLKR"
misc_feature 319206..320186
/gene="flgE"
/locus_tag="CD196_0271"
/note="flagellar basal body rod protein FlgG; Provisional;
Region: flgG; PRK12636"
/db_xref="CDD:183640"
misc_feature 319218..319310
/gene="flgE"
/locus_tag="CD196_0271"
/note="Flagella basal body rod protein; Region:
Flg_bb_rod; pfam00460"
/db_xref="CDD:109515"
misc_feature 319956..320180
/gene="flgE"
/locus_tag="CD196_0271"
/note="Flagellar basal body rod FlgEFG protein C-terminal;
Region: Flg_bbr_C; pfam06429"
/db_xref="CDD:203447"
gene 320202..320405
/locus_tag="CD196_0272"
/db_xref="GeneID:8466092"
CDS 320202..320405
/locus_tag="CD196_0272"
/codon_start=1
/transl_table=11
/product="flagellar protein"
/protein_id="YP_003213321.1"
/db_xref="GI:260682036"
/db_xref="GeneID:8466092"
/translation="MIRVTDLNGRRYILNSDLIVRIDSVPESRILLTTGEKNLVKESV
DEIVDKVIKYKRKVNVGYIRSEK"
misc_feature 320202..320381
/locus_tag="CD196_0272"
/note="Flagellar protein (FlbD); Region: FlbD; pfam06289"
/db_xref="CDD:148101"
gene 320405..321223
/gene="motA"
/locus_tag="CD196_0273"
/db_xref="GeneID:8463426"
CDS 320405..321223
/gene="motA"
/locus_tag="CD196_0273"
/codon_start=1
/transl_table=11
/product="chemotaxis protein"
/protein_id="YP_003213322.1"
/db_xref="GI:260682037"
/db_xref="GeneID:8463426"
/translation="MKKTDSLTFIGLILSTVLVLFGAVKGSSSGLKSFFDFASILITV
FGSFGALMITFTIDDIKLIKDALQYSFKTMNISKLDLLNQFKTLSKKARREGLLSIES
DVMKIQDPFMKKGLELCIDGLEVNEIRSILELEIDSVEETNNRYSKLFKTWGTFAPAF
GMLGTLIGLIQMLSDLTSPDLIASGMGKALITTFYGSLLANIALNPIAYNIDEKTEKE
IYVKEMMLEGIISIQSGESSIVVEERLATYLSNNEKLEIMKSNKNTERAMSNGA"
misc_feature 320405..321166
/gene="motA"
/locus_tag="CD196_0273"
/note="flagellar motor protein MotP; Reviewed; Region:
PRK06926"
/db_xref="CDD:180755"
misc_feature 320417..321151
/gene="motA"
/locus_tag="CD196_0273"
/note="MotA/TolQ/ExbB proton channel family; Region:
MotA_ExbB; cl00568"
/db_xref="CDD:214083"
gene 321213..321908
/gene="motB"
/locus_tag="CD196_0274"
/db_xref="GeneID:8466333"
CDS 321213..321908
/gene="motB"
/locus_tag="CD196_0274"
/codon_start=1
/transl_table=11
/product="chemotaxis protein"
/protein_id="YP_003213323.1"
/db_xref="GI:260682038"
/db_xref="GeneID:8466333"
/translation="MARKKNKKKDEINPDAWLATYADTITLILTFFVLLYATSVVDME
KFKNIADALKGQFSGISMFSTGSSTSEKSPIESVLVDKNDKSNLEQDLKDKVNNSNLQ
NSVTVKDDSRGILLELDDSILFDSGISELKADSKATLNKVYDMIKMMKNKIVIEGHTD
NVPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDPRLFSATGCGEYQPLVSNETAKGR
AENRRVNILITID"
misc_feature 321213..321896
/gene="motB"
/locus_tag="CD196_0274"
/note="flagellar motor protein MotB; Reviewed; Region:
motB; PRK07734"
/db_xref="CDD:181095"
misc_feature 321213..321386
/gene="motB"
/locus_tag="CD196_0274"
/note="Membrane MotB of proton-channel complex MotA/MotB;
Region: MotB_plug; pfam13677"
/db_xref="CDD:205853"
misc_feature 321573..321896
/gene="motB"
/locus_tag="CD196_0274"
/note="Peptidoglycan binding domains similar to the
C-terminal domain of outer-membrane protein OmpA; Region:
OmpA_C-like; cd07185"
/db_xref="CDD:143586"
misc_feature order(321588..321593,321687..321692,321711..321713,
321723..321728,321735..321737,321864..321866,
321876..321878)
/gene="motB"
/locus_tag="CD196_0274"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:143586"
gene 321920..322363
/gene="fliL"
/locus_tag="CD196_0275"
/db_xref="GeneID:8466334"
CDS 321920..322363
/gene="fliL"
/locus_tag="CD196_0275"
/codon_start=1
/transl_table=11
/product="flagellar basal body-associated protein"
/protein_id="YP_003213324.1"
/db_xref="GI:260682039"
/db_xref="GeneID:8466334"
/translation="MFKNKKIIIIILILIIFSAGAGFFILGEGGNKQIDKIAGLFIPT
GKGKDEVKTENLDLEEMVLKLADEGVRYLKVSITVSYDSSYKDIEKNTPLIRDNIINC
FMAKRADDFTADNLKNIKEEIKNTLNIQLGENVIQNIYFTNIVVQ"
misc_feature 322085..322360
/gene="fliL"
/locus_tag="CD196_0275"
/note="Flagellar basal body-associated protein FliL;
Region: FliL; pfam03748"
/db_xref="CDD:202757"
gene 322378..322752
/locus_tag="CD196_0276"
/db_xref="GeneID:8466110"
CDS 322378..322752
/locus_tag="CD196_0276"
/codon_start=1
/transl_table=11
/product="flagellar protein"
/protein_id="YP_003213325.1"
/db_xref="GI:260682040"
/db_xref="GeneID:8466110"
/translation="MILYLLKILICIPIILILIVLSLKISQGTLLKKYNDKYIKILDI
VNISKNNSIIILKIGEEGCIMASSSSSMNKIKDLTKEEILRIENDIKERNFKIQDFKM
ERIKKKYDFSRYIGKFTKKEDK"
gene 322753..323418
/gene="fliP"
/locus_tag="CD196_0277"
/db_xref="GeneID:8463427"
CDS 322753..323418
/gene="fliP"
/locus_tag="CD196_0277"
/note="FliP, with proteins FliQ and FliR, forms the core
of the central channel in the flagella export apparatus"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FliP"
/protein_id="YP_003213326.1"
/db_xref="GI:260682041"
/db_xref="GeneID:8463427"
/translation="MELLSKLPLADVPYTSSMQLFLFLTALMFLPFVMFMMTSFVRIV
ISLSFLKSALGAQQAIPSQILVGLAIVLTIFIMRPVLNEINEKALQPYMKEEVTMEEA
MKEAEGPIKEFLLKQTRQTDLDLFVEQAGLKEKKLTRENIPLSVVVPAFAISELKTAF
QIGFLIYIPFLIIDLVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGWNLIVKTLIL
GFG"
misc_feature 322792..323415
/gene="fliP"
/locus_tag="CD196_0277"
/note="flagellar biosynthesis protein FliP; Reviewed;
Region: fliP; PRK05699"
/db_xref="CDD:180209"
gene 323431..323700
/gene="fliQ"
/locus_tag="CD196_0278"
/db_xref="GeneID:8466114"
CDS 323431..323700
/gene="fliQ"
/locus_tag="CD196_0278"
/codon_start=1
/transl_table=11
/product="flagellar export protein"
/protein_id="YP_003213327.1"
/db_xref="GI:260682042"
/db_xref="GeneID:8466114"
/translation="MSEFMIMSVLKNGMFTGAMIAAPVLIVSLVVGLLISVFQATTQI
QEQTLTFVPKLIAILLVVAIGGSWMLHTLISFTSEIFNMMSLITK"
misc_feature 323443..323667
/gene="fliQ"
/locus_tag="CD196_0278"
/note="Bacterial export proteins, family 3; Region:
Bac_export_3; pfam01313"
/db_xref="CDD:201723"
gene 323712..325526
/gene="flhB"
/locus_tag="CD196_0279"
/db_xref="GeneID:8466115"
CDS 323712..325526
/gene="flhB"
/locus_tag="CD196_0279"
/note="FlhB is a membrane protein responsible for
substrate specificity in switching from rod/hook-type
export to filament-type export; FliR is required for
export of flagellar proteins, although a specific role has
not yet been determined"
/codon_start=1
/transl_table=11
/product="bifunctional flagellar biosynthesis protein
FliR/FlhB"
/protein_id="YP_003213328.1"
/db_xref="GI:260682043"
/db_xref="GeneID:8466115"
/translation="MIFVFIRIVAFFGTLRILFPAGTPALFKSLFAIIISILISSTMQ
IEYATNIDNIVLFTLYGINETITGIMLGYITNLCFYSIRMAGSMMDQQMGLSMINMFD
PNSMTQTTLIDNLMNWTARMIFFSMDGHHVLIRGIRYSFELIPIGKSFVDNNIDYIIN
IFVQCFLTGFKIAIPIVLCLLMADFILGLISRSVPQLNVMIIGMPLKILVGIALFIIS
IPLIVNQISHLLSQIPKMYEGTFALAPMFFMGSTDKTEEATPKKKGEQRKKGNIAKSK
ELPVAMTLLAFTLLVPTLFSYVVDTLKSSLNYFLSLDFYMNINYSSIEKLVIAGLMDF
FKIFLPIAIPFLVLGIVANLFQVGILFTGETLKPNLSKLNPVSGFKNMFSMRSLSTLI
KDTAIISILAYIGYTFFQDNYLDILKLGNIYLPTLMYTVKDLVYSILSKICVAMIVIA
VADYVYQRYSHKKQLRMTKQEVKDEYKNSEGDPEIKAKIKQKQRQISSQRTMQAVPSA
TVIVTNPTHLSIAVRYEKGKDQAPVVVAKGADYLAFKIREIAKGNDIPIIENKPIARL
LYKQVEIDQEIPEDMYQAFAEILVAVYKIKNRYKVLKR"
misc_feature 323712..325505
/gene="flhB"
/locus_tag="CD196_0279"
/note="bifunctional flagellar biosynthesis protein
FliR/FlhB; Provisional; Region: PRK12772"
/db_xref="CDD:183736"
misc_feature 323712..324410
/gene="flhB"
/locus_tag="CD196_0279"
/note="flagellar biosynthesis protein FliR; Reviewed;
Region: fliR; PRK05701"
/db_xref="CDD:180211"
misc_feature 325266..325511
/gene="flhB"
/locus_tag="CD196_0279"
/note="Uncharacterized homolog of the cytoplasmic domain
of flagellar protein FhlB [Function unknown]; Region:
COG2257"
/db_xref="CDD:32438"
gene 325535..327610
/gene="flhA"
/locus_tag="CD196_0280"
/db_xref="GeneID:8466098"
CDS 325535..327610
/gene="flhA"
/locus_tag="CD196_0280"
/note="membrane protein involved in the flagellar export
apparatus"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FlhA"
/protein_id="YP_003213329.1"
/db_xref="GI:260682044"
/db_xref="GeneID:8466098"
/translation="MNKFNLKENMDVIVAFGVVGIVLMMIVPLPTFILDILLAINISL
SVLILLMTLFTTNVLDLSIFPTVLLVTTLFRLGLNLSSTRLILTQGYAGEVIEAFGSF
VVGGNYVVGIIIFLIILIVQFVVITNGSGRVSEVTARFTLDAMPGKQMSIDADLNAGV
IDDKTARKRRKELQQEADFYGSMDGANKFVKGDAIAGLIVTAINIIGGIVIGAVMLNM
TLMGAAQTYVRLTIGDGLVSQIPALLISTSAGIIVTRASTDENFGGLVSKQLTAIPKA
VMMTGCVLIVLGMMPGLPKPAFFSLGIGAIAAGYFLGREKKDTLEDLEFEKPDMVNPD
KNEVEDVTNLINVESIEVEIGYGLISLADESAGGDLLQRIASIRRQCAIDMGIVVQPI
RIRDNLQLNPNQYNIKIKGNVVGGYEIMPNMVLCMDPMNQGFSIFGIKTIEPTFGIEA
LWIESDKVEDAEIKGYTVVDSSTILITHLLDIIKSNAHELLGRQEVKTIIDAARENYS
AVVDELIPDLMTLGEIQKVLKNLLREKVNIKDRVTILETLADQSRNTKDIELLTEYVR
IALARSICNNLVDDDKTIVVATLSPETEELVSNNLQRSVNGTYPAVDPENTNKIFESI
QEVMNNVYFNHNIPVIVVSPKIRAPFRKLVEIVYPNLTVLSLNEIPNDIKIKAEGVVS
IYDDEKVYS"
misc_feature 325535..327583
/gene="flhA"
/locus_tag="CD196_0280"
/note="flagellar biosynthesis protein FlhA; Validated;
Region: flhA; PRK06012"
/db_xref="CDD:180350"
misc_feature 325592..327559
/gene="flhA"
/locus_tag="CD196_0280"
/note="FHIPEP family; Region: FHIPEP; pfam00771"
/db_xref="CDD:201434"
gene 327588..328601
/gene="flhF"
/locus_tag="CD196_0281"
/db_xref="GeneID:8466097"
CDS 327588..328601
/gene="flhF"
/locus_tag="CD196_0281"
/note="positive regulator of class III flagellar genes"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis regulator FlhF"
/protein_id="YP_003213330.1"
/db_xref="GI:260682045"
/db_xref="GeneID:8466097"
/translation="MTKKYTANTIQDAMNLAKMELGDNITLIDKKEVRKSGIQGIFSK
KDIELTIGWEKRENVEQKDLKREIEQLKLIINNMGFDNKNDNDIDKICKNLLSLELNE
EIVESIRIDLQEMKFNGIDTSKNLVEILKKKIKIENQAINGKIALVGPPGVGKTTTIA
KLAAKLVFEENKKVGVITIDTYRIGAVEQLKIYTDIMNIPFKGVISPDEMELALDEMK
DCDVVLIDTTGRGYKNSMQILEIKNLIDKAETDNIHLVVNCTTRESDTKAIIDSYRNV
NFKSLIITKLDETITYGSIFNIMNYAQKPISYITTGQNVPDDIIKPNEDKIIRLLLGV
ESI"
misc_feature 327594..328274
/gene="flhF"
/locus_tag="CD196_0281"
/note="flagellar biosynthetic protein FlhF; Region: FlhF;
TIGR03499"
/db_xref="CDD:211827"
misc_feature 328014..328586
/gene="flhF"
/locus_tag="CD196_0281"
/note="SRP54-type protein, GTPase domain; Region: SRP54;
smart00962"
/db_xref="CDD:198030"
misc_feature 328020..328514
/gene="flhF"
/locus_tag="CD196_0281"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
gene 328598..329476
/gene="fleN"
/locus_tag="CD196_0282"
/db_xref="GeneID:8466099"
CDS 328598..329476
/gene="fleN"
/locus_tag="CD196_0282"
/codon_start=1
/transl_table=11
/product="flagellar number regulator"
/protein_id="YP_003213331.1"
/db_xref="GI:260682046"
/db_xref="GeneID:8466099"
/translation="MIDQAQILRKMAMEKRGLDEFIVENENVPKIITIASGKGGVGKS
NLATNLSICLTKLNKKVLILDADIGMSNIDIIMGVNVKGTIIDVINGEKNIEDIISQT
KYGVNIISGGSALNHIEDFTEAQRNKFIHSIEQIHDVDFIIIDTGAGMSKSLLSFIYC
STEFFLITTPEPTSLTDAYSLLKAISNFGIKRSANIIINRVIDLEEAKSTYKRIKMVV
DKFLNLNLELYGYIIDDKKVSLCVKKQIPFILEYPTSIASKCIIAIAKRMVSQSREDI
VDNKSFLRKMFSIFKS"
misc_feature 328685..329470
/gene="fleN"
/locus_tag="CD196_0282"
/note="Septum formation inhibitor-activating ATPase [Cell
division and chromosome partitioning]; Region: MinD;
COG2894"
/db_xref="CDD:32719"
misc_feature 328688..>328822
/gene="fleN"
/locus_tag="CD196_0282"
/note="FleN is a member of the Fer4_NifH superfamily. It
shares the common function as an ATPase, with the
ATP-binding domain at the N-terminus. In Pseudomonas
aeruginosa, FleN gene is involved in regulating the number
of flagella and chemotactic motility by...; Region:
FleN-like; cd02038"
/db_xref="CDD:73301"
misc_feature 328706..328729
/gene="fleN"
/locus_tag="CD196_0282"
/note="P-loop; other site"
/db_xref="CDD:73301"
misc_feature <329009..329293
/gene="fleN"
/locus_tag="CD196_0282"
/note="FleN is a member of the Fer4_NifH superfamily. It
shares the common function as an ATPase, with the
ATP-binding domain at the N-terminus. In Pseudomonas
aeruginosa, FleN gene is involved in regulating the number
of flagella and chemotactic motility by...; Region:
FleN-like; cd02038"
/db_xref="CDD:73301"
gene 329490..330191
/gene="fliA"
/locus_tag="CD196_0283"
/db_xref="GeneID:8466088"
CDS 329490..330191
/gene="fliA"
/locus_tag="CD196_0283"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma factor for flagellar
operon"
/protein_id="YP_003213332.1"
/db_xref="GI:260682047"
/db_xref="GeneID:8466088"
/translation="MNREELIKENMPLVKSIARKFFIPGKGFEYQDLVNSGVIGLIDA
INKFDAEKGAKFSSYSYIKIKSAILDEIRNQSPISKHNLTKVNKYNRVVEKLQSKLLR
EPTSYEIAKELNVSEKELHDIESNIDMLNIVSLNYVIFEDTNETVQDVISDREEEAPE
NIIEEEEKLEILSKAISNLNEREKLILSLYYYEDLNLKEIGKVLGVSESRVSQLHRKS
IRNLRNKIKELKYSI"
misc_feature 329505..330170
/gene="fliA"
/locus_tag="CD196_0283"
/note="RNA polymerase sigma factor, FliA/WhiG family;
Region: FliA_WhiG; TIGR02479"
/db_xref="CDD:162877"
misc_feature 329505..329717
/gene="fliA"
/locus_tag="CD196_0283"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature 329742..329948
/gene="fliA"
/locus_tag="CD196_0283"
/note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539"
/db_xref="CDD:146934"
misc_feature 330003..330158
/gene="fliA"
/locus_tag="CD196_0283"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(330027..330029,330057..330059,330075..330080,
330108..330110,330114..330119,330123..330131,
330135..330140,330144..330146)
/gene="fliA"
/locus_tag="CD196_0283"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 330207..330629
/locus_tag="CD196_0284"
/db_xref="GeneID:8466100"
CDS 330207..330629
/locus_tag="CD196_0284"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213333.1"
/db_xref="GI:260682048"
/db_xref="GeneID:8466100"
/translation="MIQIILIVVSILIIVTIVINLHKESKNKDNRYFDKIFEQEYEAN
DRLIIAEKRRFFLDKVLAEIRSNNHIKVYENYNLIKANEERKENIFIESKKEVRQENE
LSLKVKHLISSGYDDVEICKMLDIGKGELSLIRSCYKI"
gene 330840..331613
/gene="flgG"
/locus_tag="CD196_0285"
/db_xref="GeneID:8463428"
CDS 330840..331613
/gene="flgG"
/locus_tag="CD196_0285"
/note="makes up the distal portion of the flagellar basal
body rod; the Clostridia have two adjacent copies of the
FlgG gene"
/codon_start=1
/transl_table=11
/product="flagellar basal body rod protein FlgG"
/protein_id="YP_003213334.1"
/db_xref="GI:260682049"
/db_xref="GeneID:8463428"
/translation="MIRGLYTAVSAMITNQQKQNVVVNNLANMDTNGYKSKQLLTKSF
DELKLEGYNNYANGTKQKQIIGDISPGISMDETITNFNQGPIKTTDNKMDVAIQGKGF
FLVSDAAGNQFYTRNGNFRTDNQGDLITSEGYYVLGTNTATGAVGHINVGNQKFEVAK
DNTISLDGNAMYKFNIVDFNDYNNLKKEGDNLYSGGGAMKVNNALTIQSAIESSNVDM
VSEINNMMTISREYEANQKIIQAMDSKLAKIASEIGSVR"
misc_feature 330840..331607
/gene="flgG"
/locus_tag="CD196_0285"
/note="flagellar basal body rod protein FlgG; Reviewed;
Region: flgG; PRK12818"
/db_xref="CDD:183768"
misc_feature 331296..331538
/gene="flgG"
/locus_tag="CD196_0285"
/note="Flagellar basal body rod FlgEFG protein C-terminal;
Region: Flg_bbr_C; cl15855"
/db_xref="CDD:214255"
gene 331634..332395
/gene="flgG"
/locus_tag="CD196_0286"
/db_xref="GeneID:8466093"
CDS 331634..332395
/gene="flgG"
/locus_tag="CD196_0286"
/note="makes up the distal portion of the flagellar basal
body rod; the Clostridia have 2 adjacent copies of the
FlgG gene"
/codon_start=1
/transl_table=11
/product="flagellar basal body rod protein FlgG"
/protein_id="YP_003213335.1"
/db_xref="GI:260682050"
/db_xref="GeneID:8466093"
/translation="MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDL
VDEVLNRPSYPTNGNDISTGTGAKATAPMRIYEQGALAPTDSKSNLAIDGEGFFRVIR
KDGTYAYTRNGGFNIDGLGKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELF
VDNKKIGKINLYQPIGTQNFISEGDSLFVATDAAQIKQVEKVDIVQGYRERSNVSLQE
EFVDLIATQRAFQMNSKGIKTADEMWQIANNLRAK"
misc_feature 331634..332389
/gene="flgG"
/locus_tag="CD196_0286"
/note="flagellar basal body rod protein FlgG; Reviewed;
Region: flgG; PRK12817"
/db_xref="CDD:183767"
misc_feature 331646..331738
/gene="flgG"
/locus_tag="CD196_0286"
/note="Flagella basal body rod protein; Region:
Flg_bb_rod; pfam00460"
/db_xref="CDD:109515"
misc_feature 332165..332383
/gene="flgG"
/locus_tag="CD196_0286"
/note="Flagellar basal body rod FlgEFG protein C-terminal;
Region: Flg_bbr_C; pfam06429"
/db_xref="CDD:203447"
gene 332418..333299
/gene="fliM"
/locus_tag="CD196_0287"
/db_xref="GeneID:8463429"
CDS 332418..333299
/gene="fliM"
/locus_tag="CD196_0287"
/codon_start=1
/transl_table=11
/product="flagellar motor switch protein"
/protein_id="YP_003213336.1"
/db_xref="GI:260682051"
/db_xref="GeneID:8463429"
/translation="MNDMKEYDFGKPQSYSRENLTCLNFLLAEFCKKYKNYIIYELKC
NSSMIVDSIDQVNYQTFLDRVTSSCVVVQNAMEPVMKNFSFRIDRSVADMWIDITSGG
TGVIKDNDRELTELDKKVLLHLMDDLVRNMHLFEGFENIQVLDTHTHINLPQLCSPTA
PVCVVDLKVLNDNEYIGSVSLCFPYNGLEALLESISVIEFFDNDVGDDSEEFTKKIYN
SVSNIELSVIAEIGKVSINVEDLLKLEVGDVIVTNKKINDYIDIFVENSKSYTATPGF
ISSKKGVKINDAVGKEV"
misc_feature 332436..332996
/gene="fliM"
/locus_tag="CD196_0287"
/note="Flagellar motor switch protein FliM; Region: FliM;
pfam02154"
/db_xref="CDD:111086"
misc_feature 333069..333293
/gene="fliM"
/locus_tag="CD196_0287"
/note="Surface presentation of antigens (SPOA); Region:
SpoA; pfam01052"
/db_xref="CDD:201573"
gene 333302..333676
/gene="fliN"
/locus_tag="CD196_0288"
/db_xref="GeneID:8466111"
CDS 333302..333676
/gene="fliN"
/locus_tag="CD196_0288"
/codon_start=1
/transl_table=11
/product="flagellar motor switch protein"
/protein_id="YP_003213337.1"
/db_xref="GI:260682052"
/db_xref="GeneID:8466111"
/translation="MDNSNLISDEEAKMLLNDKVESEVDGDDELALDVSEVNRNNIQR
ILDLKLELSVVIGRTKMTLRDILNLHKGSLIELNTLADQDVEILIDNKVLAYGKVVVV
DLNFGVKITSIVSEEDMVKSLV"
misc_feature <333362..333640
/gene="fliN"
/locus_tag="CD196_0288"
/note="Flagellar motor switch/type III secretory pathway
protein [Cell motility and secretion / Intracellular
trafficking and secretion]; Region: FliN; COG1886"
/db_xref="CDD:32070"
gene 333708..335111
/locus_tag="CD196_0289"
/db_xref="GeneID:8466113"
CDS 333708..335111
/locus_tag="CD196_0289"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213338.1"
/db_xref="GI:260682053"
/db_xref="GeneID:8466113"
/translation="MVLILNLNDIKKDILKLNKKDSCSLYNESINNINNNCISTGLKF
LKQARDLNPDDVDILNLTGLVNLLKCNFDDAVESFYKSSLCEKTALCEKYINMLTSEE
FLIFFEKYNQLIRLINKGMYKEAIQGFKLITDQYCDLIEPYELLALLYDKEEEYIKFD
ECLEVLKIIDKENYLLNQENNTLDMYNSANIQTKSNVKVDDYKNEFLHKSSSNHKIND
YNNVTKEKSSSKNQKSSDSNKKKSIKKNKYLYIAIILGILLVGQSIYSSYKMNNLTDK
ISKNNETKNEESIDSNLTKKENNIEENEDMSKASNINKSNKNINKEADVKSKKNTVEN
EDDKDSDLFTEDELMSKANTLKSEKKTKSSIQLYKKVADIGENKGNTSEATYQVAILS
EKLKDYKTAEEYYKMYVENYSEKDAYFDESYYNLGMMYYNNGDLKNSKLTLKKLVNKV
PNSMYNNSKVKEILKEE"
misc_feature 334749..334949
/locus_tag="CD196_0289"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
gene 335227..337164
/gene="htpG"
/locus_tag="CD196_0290"
/db_xref="GeneID:8463430"
CDS 335227..337164
/gene="htpG"
/locus_tag="CD196_0290"
/note="molecular chaperone"
/codon_start=1
/transl_table=11
/product="heat shock protein 90"
/protein_id="YP_003213339.1"
/db_xref="GI:260682054"
/db_xref="GeneID:8463430"
/translation="MEFEKGSISIHTENIFPIIKKWLYSDKDIFIRELISNGCDAVSK
HKRLVSLGEISENKSSDYKITVSVNKGEGTLKFIDNGIGMTEEEIKKYINQVAFSGAE
DFFNKYKDKMEESNDIIGHFGLGFYSAFMVSKKVQIDTLSYTEGATPVRWISEGGTEY
EISESDARNDRGTTITLFIDDDSKEFLDEFTVRGIINKYCSFLPVEIYLEDVERLERE
AKEAEEKAKKQKEDGKEEIVDAKVIEPLNDTNPLWLKSPKDCTDEEYKEFYRKVFNVF
DEPLFWIHLNVDYPFNLKGILYFPKLKNEFELTEGKVKLYNNQVFVADNIKEVIPEFL
LLLKGVIDCPDLPLNVSRSFLQNDRDVSKISKHIIKKVADKLKSLCKNEREEYNKFWD
DIQIFIKYGCLKDESFYEKVKECILFKTIDDEYITIQDYLEKCKDKHENKVFYVSDKE
QQSQYIKLFKEYDLSAVVLNSSIDTHFISFMEYKENGVKFNRIDADLSDVLKDKNENK
DSEENKEEIAKIEGLFKEAVGERVKNYSVEGLKNEDTPAMVLVSEQSIRMAEMQSRFA
GMDLGMNFEEEKTLVINENSPIIKKLVSLKDDEEKKDKITLICNQIADLALLSNKELK
PDELDSFVQRSNKLMSLLIEL"
misc_feature 335227..337158
/gene="htpG"
/locus_tag="CD196_0290"
/note="heat shock protein 90; Provisional; Region:
PRK05218"
/db_xref="CDD:179965"
misc_feature 335314..>335631
/gene="htpG"
/locus_tag="CD196_0290"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(335323..335325,335335..335337,335344..335346,
335455..335457,335461..335463,335467..335469,
335473..335478,335593..335604)
/gene="htpG"
/locus_tag="CD196_0290"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 335335..335337
/gene="htpG"
/locus_tag="CD196_0290"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(335467..335469,335473..335475,335593..335595,
335599..335601)
/gene="htpG"
/locus_tag="CD196_0290"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 337552..338682
/gene="dhaT"
/locus_tag="CD196_0291"
/db_xref="GeneID:8466243"
CDS 337552..338682
/gene="dhaT"
/locus_tag="CD196_0291"
/codon_start=1
/transl_table=11
/product="1,3-propanediol dehydrogenase"
/protein_id="YP_003213340.1"
/db_xref="GI:260682055"
/db_xref="GeneID:8466243"
/translation="MNFNYNLPVNILFGRGRINDVGKEVSKYGKKVLIVTGKNSTKKT
GLLDKTIDLLKDSKIEYEVFDRVEQNPLITTIYSGVEIIKSTGCDCVLGLGGGSIMDA
AKSIAFSYKNPGDLNDYIFGIRQGEEALPIILVPTTSGTGSEGNCFAVLTNSETKDKK
SIKKNSMYAKASIIDPELMVTMPKHIIASVGFDALAHNMEAYLSNGRNPLADVQAIYG
IELISENLIKVYNDVNDLEAWEKITLASTIGGMTIGTAGTALPHGMEHPVSGLRDVMH
GKGLAALTPTIIESSWDIDIERFGNISKVLGGTCAEDCSDAIRNFLKKIDLDIKLSDL
GIEKSDIDWLTDNCMKISVANIKRHPKYFNKEQIKEMYHKSL"
misc_feature 337564..338670
/gene="dhaT"
/locus_tag="CD196_0291"
/note="Iron-containing alcohol dehydrogenases-like;
Region: Fe-ADH1; cd08185"
/db_xref="CDD:173944"
misc_feature 337573..338655
/gene="dhaT"
/locus_tag="CD196_0291"
/note="Iron-containing alcohol dehydrogenase; Region:
Fe-ADH; pfam00465"
/db_xref="CDD:201245"
misc_feature order(337660..337662,337837..337845,337852..337854,
337861..337863,337960..337965,337969..337971,
338026..338031,338083..338085,338107..338109,
338128..338130,338140..338142,338335..338337,
338347..338349,338377..338379)
/gene="dhaT"
/locus_tag="CD196_0291"
/note="putative active site [active]"
/db_xref="CDD:173944"
misc_feature order(338128..338130,338140..338142,338335..338337,
338377..338379)
/gene="dhaT"
/locus_tag="CD196_0291"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:173944"
gene 338909..339931
/gene="spl"
/locus_tag="CD196_0292"
/db_xref="GeneID:8466011"
CDS 338909..339931
/gene="spl"
/locus_tag="CD196_0292"
/codon_start=1
/transl_table=11
/product="spore photoproduct lyase"
/protein_id="YP_003213341.1"
/db_xref="GI:260682056"
/db_xref="GeneID:8466011"
/translation="MFNPKRIIFEKGTLDTDVGKKIYNKFRDNKDVEIINISSNRIKE
HIPGENLYEQYRSGKQTMVVGIRKSLKFQTCKPSANYQLPLVSGCMGRCEYCYLNTQL
GDKPFIRVFVNVDEILEQTKKYIEDRKPQVTIFEGAATSDPVPVEPYTNSLKKTIEFF
GREEKGRFRFVTKYSDVDSLLDAEHNNHTEIRFSINTPRIINEHEHYTASANKRIESA
VKLARAGYQIGFIIAPVFLYEGWKEEYKNLIISIKEALPKDFDKKIIFEVISHRYTTK
AKNRILEIYPDTLLPMENEDRKFKYGQFGYGKYVYDKEQLDDMKEFFLKEINGVFKNS
LIKYII"
misc_feature 339044..339928
/gene="spl"
/locus_tag="CD196_0292"
/note="DNA repair photolyase [DNA replication,
recombination, and repair]; Region: SplB; COG1533"
/db_xref="CDD:31722"
misc_feature 339155..339784
/gene="spl"
/locus_tag="CD196_0292"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature order(339173..339175,339179..339181,339185..339187,
339191..339199,339311..339313,339317..339322,
339401..339409,339488..339490,339605..339607,
339710..339715)
/gene="spl"
/locus_tag="CD196_0292"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene 340113..341024
/locus_tag="CD196_0293"
/db_xref="GeneID:8466657"
CDS 340113..341024
/locus_tag="CD196_0293"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_003213342.1"
/db_xref="GI:260682057"
/db_xref="GeneID:8466657"
/translation="MHAWESIQITLDLIEANLSEEISINELANKANLSPFYYQRLFKR
LVNKTVMEYIKLRRLARASEYLAEHKNRILDVALNFGFASHETFTRSFKKAYGLTPEK
YRANPVKLNHFIKPELILNYAMVDEGVPLIADDIVIEVNRKTLSNPRTFVGIEIEVPI
CQLVGGETTGIAIVEELWMKLGSQRHNIPNQIPGGNEFAALYMGNAKEGNCMYMAGVE
VESGTSVEGYNTFELPAKEYLVCGFEAENFNELVNSAVFKADKFMERWMKKHNLTTTD
FAIEMYYPTTPEAAYLEHWIVPVPIEQ"
misc_feature 340152..340277
/locus_tag="CD196_0293"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature 340173..340424
/locus_tag="CD196_0293"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature 340314..340424
/locus_tag="CD196_0293"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature 340548..341000
/locus_tag="CD196_0293"
/note="GyrI-like small molecule binding domain; Region:
GyrI-like; cl01368"
/db_xref="CDD:207387"
gene 341039..341455
/locus_tag="CD196_0294"
/db_xref="GeneID:8463431"
CDS 341039..341455
/locus_tag="CD196_0294"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213343.1"
/db_xref="GI:260682058"
/db_xref="GeneID:8463431"
/translation="MNWQDAFFQDTKPTFEQINEFINNPLWDKLNKTLVSTYNVEPKL
EYSKCSMQRGWNVKYKKRGKSLCTLYPQEGYFKALVIVSESNRVEVDLFINTCCDYIK
KIYNEVNFFNGSKWLMIQVDSLLVLNDMLELIKFRA"
misc_feature 341063..341452
/locus_tag="CD196_0294"
/note="Protein of unknown function (DUF3788); Region:
DUF3788; pfam12663"
/db_xref="CDD:205001"
gene complement(341549..341941)
/locus_tag="CD196_0295"
/db_xref="GeneID:8463432"
CDS complement(341549..341941)
/locus_tag="CD196_0295"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_003213344.1"
/db_xref="GI:260682059"
/db_xref="GeneID:8463432"
/translation="MSINTEKNITKNVEELTCPIRYALDIVGGKWKLPIICMLAVENP
IRYSSIKRKLDGITNTMLAQSLKDLESTGIVHRKQYNEIPPKVEYTLTSKGKSIVPIL
QQFANWGATNMQEKNTCGLSCKECRKIK"
misc_feature complement(341591..341914)
/locus_tag="CD196_0295"
/note="Predicted transcriptional regulators
[Transcription]; Region: COG1733"
/db_xref="CDD:31919"
gene 342082..342477
/locus_tag="CD196_0296"
/db_xref="GeneID:8463433"
CDS 342082..342477
/locus_tag="CD196_0296"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213345.1"
/db_xref="GI:260682060"
/db_xref="GeneID:8463433"
/translation="MKALEFLNKAGVYYLATVDENNQAHVRPLGFVMEYNGKLTFCTS
NQKDMFKQLIFNPKVELCCIDQNLNTLRILGEAVFVTSKETQAKALEIMPSLGQMYSV
GDGKFEIFSIDKAKVSCCSMSGKKIDVEL"
misc_feature 342085..342453
/locus_tag="CD196_0296"
/note="Pyridoxine 5'-phosphate (PNP) oxidase-like
proteins; Region: PNPOx_like; cl00381"
/db_xref="CDD:214059"
gene 342880..343086
/locus_tag="CD196_0297"
/db_xref="GeneID:8463434"
CDS 342880..343086
/locus_tag="CD196_0297"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213346.1"
/db_xref="GI:260682061"
/db_xref="GeneID:8463434"
/translation="MSKYSSLWEYVKKNNSQSFKLTFEEIKDIAGIEIDHSFLKYKKE
LNEYGYQVGKISLKEKTVIFNKID"
gene complement(343397..344230)
/locus_tag="CD196_0298"
/db_xref="GeneID:8463435"
CDS complement(343397..344230)
/locus_tag="CD196_0298"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="YP_003213347.1"
/db_xref="GI:260682062"
/db_xref="GeneID:8463435"
/translation="MSNYVTIDFLSYSFYNINYVTLIFYRGGIYMNFLSDLHTHSIVS
GHGYSTLLENINYCKENGIKILGTSEHGPKMPGSPHRWYFHNIQNIPRIINNIIILRG
CEANILDIKGNIDLEPFVIPRLDYLILSFHEAVFSPNTLENNTKALINAINKHDNIEI
LGHLGNPNYPIDYELIIKLAIEKNILIEINNCSIKGVSRNGSSDNCKYIATLCKKYGA
KIILTSDAHICFDIGNYEYSENILKEINFPDELIMNYPKKLINHFHQKGKLLDVDYTN
I"
misc_feature complement(343400..344140)
/locus_tag="CD196_0298"
/note="putative hydrolase; Validated; Region: PRK09248"
/db_xref="CDD:181726"
misc_feature complement(343535..>343801)
/locus_tag="CD196_0298"
/note="RNase P subunit p30; Region: RNase_P_p30; cl03389"
/db_xref="CDD:194612"
gene 344306..346873
/locus_tag="CD196_0299"
/db_xref="GeneID:8463436"
CDS 344306..346873
/locus_tag="CD196_0299"
/codon_start=1
/transl_table=11
/product="transcription antiterminator"
/protein_id="YP_003213348.1"
/db_xref="GI:260682063"
/db_xref="GeneID:8463436"
/translation="MTQKKLSRKEKVLICLKRLTEEHLNFNNGIRFGFDAEYIATEVG
INRSNASKELNQLIKESIIIKIKGKPVQYLYKESIESILGKKLNKGIFDNINSINEYS
ENDSIKDEYILESIKKENNIFNLVGCDGSLRSQIEQAKAAVIYPPKGLSTLIIGPTGV
GKSIFAEYMYKYSLTIKEDSDNAPFIIFNCADYSDNQQLLLAQLFGYVKGAFTGADKD
KYGIVHEANNGVLFLDEVHRLSAEGQEMLFLLMDKGIYRRLGEANKVHECRVMIIAAT
TEDPETAMLETFLRRIPVTIKIPSLEERGFQERMKLICYFFKEESVRIGVKLKVSKEV
IKAFILYKCKGNIGQLKSDIQLICARAFLDYMTYKRECVYVRLSLLPNNIRESLYGNN
RKEEFVQNFSFIGKDDIIFLPEEKDFESENLLIENKKYDLDFYGMIKETWNKLQQEGI
KESQIRSVIDGDIQKYSYNLMNTFIYNNSNQTAYNNIVNDSIATTVKYILQKHDKWSK
REGLDKLIKAIALHIQNLIERIKIGNIVKHPNKDEIMKERAYEYNIAKEILSNMSLMY
GVEFPEDEAIFLATFLYLSYVGLNEESIAILVIMHGESTASSMVNVANTLLDCNHAVA
INMGLEDRVQDILVQAVEIANKIDKGKGILILTDMGSILTFAKVIRDATGKEVKAVDM
VSTPIVIEATRKALTPEMTLEKLYFNIIESIKKHYGDMEVTYAEKDNGGRYFDRLLID
NISKTLTFLNGEKAYFILKEVINRISEHYSLVIQDELLVKFIFHCSCMIERVIIKESL
VYKSYEERISRNKELYLVIKESFKLVEETFDIIISDMEYANILDIFESQYDTDKFKS"
misc_feature 344402..345664
/locus_tag="CD196_0299"
/note="Transcriptional regulators containing an AAA-type
ATPase domain and a DNA-binding domain [Transcription /
Signal transduction mechanisms]; Region: PspF; COG1221"
/db_xref="CDD:31414"
misc_feature 344708..345205
/locus_tag="CD196_0299"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 344771..344794
/locus_tag="CD196_0299"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(344774..344797,345005..345007,345134..345136)
/locus_tag="CD196_0299"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 344993..345010
/locus_tag="CD196_0299"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 345176..345178
/locus_tag="CD196_0299"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 345842..346054
/locus_tag="CD196_0299"
/note="PRD domain; Region: PRD; pfam00874"
/db_xref="CDD:201484"
misc_feature 346085..346450
/locus_tag="CD196_0299"
/note="PTS_IIA, PTS system, mannose/sorbose specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIA_man; cl00025"
/db_xref="CDD:206789"
misc_feature order(346106..346108,346151..346156,346184..346186,
346286..346288,346382..346384)
/locus_tag="CD196_0299"
/note="active pocket/dimerization site"
/db_xref="CDD:28890"
misc_feature order(346106..346108,346277..346279,346286..346288)
/locus_tag="CD196_0299"
/note="active site"
/db_xref="CDD:28890"
misc_feature 346106..346108
/locus_tag="CD196_0299"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:28890"
misc_feature 346580..346843
/locus_tag="CD196_0299"
/note="PRD domain; Region: PRD; pfam00874"
/db_xref="CDD:201484"
gene 347094..347507
/locus_tag="CD196_0300"
/db_xref="GeneID:8463437"
CDS 347094..347507
/locus_tag="CD196_0300"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIA"
/protein_id="YP_003213349.1"
/db_xref="GI:260682064"
/db_xref="GeneID:8463437"
/translation="MKLVIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNI
EDLNKNFVEKLNELDEGDGVLVLADLLGGSPSNVASLNLKKGGKFHALTGVNLPMLLE
ALINREGKSLEELAEACIEAGQTGINNINKVLSSM"
misc_feature 347106..347465
/locus_tag="CD196_0300"
/note="PTS_IIA, PTS system, mannose/sorbose specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIA_man; cd00006"
/db_xref="CDD:28890"
misc_feature order(347127..347129,347169..347174,347205..347207,
347313..347315,347406..347408)
/locus_tag="CD196_0300"
/note="active pocket/dimerization site"
/db_xref="CDD:28890"
misc_feature order(347127..347129,347298..347300,347313..347315)
/locus_tag="CD196_0300"
/note="active site"
/db_xref="CDD:28890"
misc_feature 347127..347129
/locus_tag="CD196_0300"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:28890"
gene 347531..348028
/locus_tag="CD196_0301"
/db_xref="GeneID:8463438"
CDS 347531..348028
/locus_tag="CD196_0301"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIB"
/protein_id="YP_003213350.1"
/db_xref="GI:260682065"
/db_xref="GeneID:8463438"
/translation="MSLVKYCRCDDRLIHGQVIYKWVKHLGVKKIVVVDDETTNDVIA
KGLIKMAAPKNIDLSILTVSESRRYFYNNQADDNVFVLIKNLDTANRMIEEGINIKKL
IVGRIPTGIGKKKISQNVYINKKEFLLIDEFIKKNINVSIQMVPDEEEVELNQNINRY
KGEFI"
misc_feature 347549..347986
/locus_tag="CD196_0301"
/note="PTS system sorbose subfamily IIB component; Region:
PTSIIB_sorb; pfam03830"
/db_xref="CDD:190766"
misc_feature order(347552..347554,347564..347566,347573..347575)
/locus_tag="CD196_0301"
/note="active site"
/db_xref="CDD:28885"
misc_feature 347573..347575
/locus_tag="CD196_0301"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:28885"
gene 348031..348432
/locus_tag="CD196_0302"
/db_xref="GeneID:8463439"
CDS 348031..348432
/locus_tag="CD196_0302"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIA"
/protein_id="YP_003213351.1"
/db_xref="GI:260682066"
/db_xref="GeneID:8463439"
/translation="MNKYKVIILCHGTWGKVLVEETNKNFGLSNQYEVLSLSSEKDVS
VFMKEVEEVVDKEDVKIIISDLYGGSTSSVAIAVAIRRGIDAINGLSLQTILIVDEEL
SKEDKLHTLPERIVKKNNNLCVDLIKEFKKI"
misc_feature 348043..348387
/locus_tag="CD196_0302"
/note="PTS_IIA, PTS system, mannose/sorbose specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIA_man; cl00025"
/db_xref="CDD:206789"
misc_feature order(348061..348063,348103..348108,348139..348141,
348238..348240,348328..348330)
/locus_tag="CD196_0302"
/note="active pocket/dimerization site"
/db_xref="CDD:28890"
misc_feature order(348061..348063,348223..348225,348238..348240)
/locus_tag="CD196_0302"
/note="active site"
/db_xref="CDD:28890"
misc_feature 348061..348063
/locus_tag="CD196_0302"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:28890"
gene 348450..348938
/locus_tag="CD196_0303"
/db_xref="GeneID:8463440"
CDS 348450..348938
/locus_tag="CD196_0303"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIB"
/protein_id="YP_003213352.1"
/db_xref="GI:260682067"
/db_xref="GeneID:8463440"
/translation="MAKITLVRVDHRLIHGQVITKWVKIAQAQKIIIVDDFLGQDEFM
ADIYKMAAPSGVEVVILTAEDAGQAFQNNTLGDKNIFILFKNVDMANKAYKAGLKYEK
IQLGGIPNEAGKKMVFTAVSLGNEDVEQLNELNENGVEIVLQVIPEESSMTYENALKK
FK"
misc_feature 348456..348902
/locus_tag="CD196_0303"
/note="PTS system sorbose subfamily IIB component; Region:
PTSIIB_sorb; pfam03830"
/db_xref="CDD:190766"
misc_feature order(348471..348473,348483..348485,348492..348494)
/locus_tag="CD196_0303"
/note="active site"
/db_xref="CDD:28885"
misc_feature 348492..348494
/locus_tag="CD196_0303"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:28885"
gene 348965..349720
/locus_tag="CD196_0304"
/db_xref="GeneID:8463441"
CDS 348965..349720
/locus_tag="CD196_0304"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIC"
/protein_id="YP_003213353.1"
/db_xref="GI:260682068"
/db_xref="GeneID:8463441"
/translation="MESVLMLAIVTGLWYWFAAGLAGYTLFSTLKSPLFIGFSLGLLW
GDVTTGMIVGASIEMVYLGMVAAGGNIPSDKCLAALIAIPVALQTGVNAEVAVSIAVP
LGVIGVLVNNLRRTGNAVLVHKADKYAEEGNTKGIWRCATLYSLIFGFVLRFPIVFVC
NFFGADLVQSLLDVIPQWLMNGLTVMGGILPALGFATTIFTIGKNKFLPMFIIGFFMV
QYFEISITAAAIFGVCIALLITFMKEDKRVGEV"
misc_feature 348965..349681
/locus_tag="CD196_0304"
/note="PTS system sorbose-specific iic component; Region:
EII-Sor; pfam03609"
/db_xref="CDD:146312"
gene 349720..350583
/locus_tag="CD196_0305"
/db_xref="GeneID:8463442"
CDS 349720..350583
/locus_tag="CD196_0305"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IID"
/protein_id="YP_003213354.1"
/db_xref="GI:260682069"
/db_xref="GeneID:8463442"
/translation="MQEIKNKEVKNGQGPTEVNKTRVLTKKDVTKTYLRWWWTAELSN
SFERMQALAVCASFTPALEKLYKKKEDLVDALKRHLQFFNTQAIWGGLIHGTVLAMEE
EKATEGKIPGEVISGVKNGLMGPLAGIGDTLDFGTFQTIFLALGASFGAEGSVIGAFF
PIMFSILLFCEGYYLFHLGYSLGRDSIKKILSGGIVNKIIDGASILGMFMMGALSATT
VKLSTPLSFDIGGKAIVVQDTLNMIAPGLLPLGVVFFVYWGMKYKKWTITKLLVILVV
LALVGSFIGIF"
misc_feature 349786..350580
/locus_tag="CD196_0305"
/note="PTS system mannose/fructose/sorbose family IID
component; Region: EIID-AGA; pfam03613"
/db_xref="CDD:146316"
gene 350630..351109
/locus_tag="CD196_0306"
/db_xref="GeneID:8463443"
CDS 350630..351109
/locus_tag="CD196_0306"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213355.1"
/db_xref="GI:260682070"
/db_xref="GeneID:8463443"
/translation="MSEKMYTEKEYLEGIRGATGERAVWFYLLMKEAEKLGANPDDIC
KEAIYGFGKMRGQKYNVADTPGKMAEMLYNSKGQKVFEMELVENTDENGVLKFHHCPL
DAAWKEYGLTKEERKEICRLACYGDYGRVDCAQGVKLDFAQKCAHDDEVCELVFTKK"
misc_feature 350693..351097
/locus_tag="CD196_0306"
/note="L-2-amino-thiazoline-4-carboxylic acid hydrolase;
Region: ATC_hydrolase; pfam14196"
/db_xref="CDD:206364"
gene 351174..352481
/locus_tag="CD196_0307"
/db_xref="GeneID:8463444"
CDS 351174..352481
/locus_tag="CD196_0307"
/codon_start=1
/transl_table=11
/product="peptidase"
/protein_id="YP_003213356.1"
/db_xref="GI:260682071"
/db_xref="GeneID:8463444"
/translation="MDISRSVDNSLNRTIEFLKELIKIDSQQGEPISQCPFGIGPKKS
LDKTLDYCASLGFSVKNIDNYIGYAEIGEGEELIGIPMHLDIVPPGEGWSVDPFSGAV
IDNIIYGRGVIDNKGAVSMLIHVLKNIEDMYPTINKRIRLIFGTNEETDMKCIKYYLD
KGEEIPSMGFTPDAMYPVVNGEKGRVHIRIEKEIKIDKSKPYIIVRGGTKENVVPSHC
TAKIINGIISELTTKGVAVHASNPEKGENAISKMVIKIVEDNMDFQHREDIELVSKYL
CSDYYGDALGINQYDEVFKNTTLNLGILKVNEEKIVCELDIRYGKNIVLNNIIDRFKK
VFCNGWKIEVIAHKDLHYVDESNLVLKKLLEAYEEVTDENGYTIAMGGGTYASWFKDM
VAFGPKFLAYKTGGHGVDERVPINHIRKNMEIYTLALIKLLEL"
misc_feature 351174..352469
/locus_tag="CD196_0307"
/note="dipeptidase PepV; Reviewed; Region: PRK07318"
/db_xref="CDD:180927"
misc_feature 351216..352469
/locus_tag="CD196_0307"
/note="M20 Peptidase Xaa-His dipeptidase (PepV) degrades
hydrophobic dipeptides; Region: M20_PepV; cd03888"
/db_xref="CDD:193509"
misc_feature order(351420..351422,351513..351518,351615..351620,
351690..351695,351807..351809,351885..351887,
352125..352127,352317..352322,352383..352385,
352389..352394)
/locus_tag="CD196_0307"
/note="active site"
/db_xref="CDD:193509"
misc_feature order(351420..351422,351513..351515,351615..351620,
351690..351692,352392..352394)
/locus_tag="CD196_0307"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193509"
gene 353444..354538
/locus_tag="CD196_0308"
/db_xref="GeneID:8463445"
CDS 353444..354538
/locus_tag="CD196_0308"
/codon_start=1
/transl_table=11
/product="DNA-binding protein"
/protein_id="YP_003213357.1"
/db_xref="GI:260682072"
/db_xref="GeneID:8463445"
/translation="MNELNIAKTLILKRKEKGITQDELANYIGVSKASVSKWETGQSY
PDITFLPQLATYFNITVDELICYEPQMMKEDINKLYNKLCKDFTVKPFDEVMDEIREI
IKKYYSCFPLIFRMGLLIVNHYDIVDEKKRELLISEALEIFIRIQETCNDIDICRQAK
SMEATCYILLNQPIQVIDLLQNSNFPMINESILLAQGQMMNGQMDEARETFQLGAYQN
LISLVQNLVGILQNADKLQMKEIERRILAISDIFELDTLSPAIMLSSYLTQTQINLIH
GDNEGAIKSLRKYVDLATRDIYPIIIHGDDFFNKLDRWISEIGTGITRDDTIVKAGIV
AAIKNNPMFSLLSENKEYKFLIEKLSLLEE"
misc_feature 353462..353635
/locus_tag="CD196_0308"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(353474..353476,353486..353488,353561..353563)
/locus_tag="CD196_0308"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(353483..353485,353558..353560)
/locus_tag="CD196_0308"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(353504..353509,353540..353542,353549..353551,
353561..353566)
/locus_tag="CD196_0308"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene 354740..355660
/locus_tag="CD196_0309"
/db_xref="GeneID:8463446"
CDS 354740..355660
/locus_tag="CD196_0309"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_003213358.1"
/db_xref="GI:260682073"
/db_xref="GeneID:8463446"
/translation="MMNIVSINGLSKGFGNRKIIDNLNFTVPEGSVFGFVGKNGAGKT
TTMKMVLGLLEPDSGTIDVCGEKVTYGRTSSNRHVGYLPDVPEFYNYMRPLEYLSLCG
EITGLSKKEIKIRSEELLSLVGLGNEKRRIGGFSRGMKQRLGIAQALLSRPKLLICDE
PTSALDPVGRKEILDIMLKIKDSTTVIFSTHILSDVERICDHVAILNKGSIALSGTLS
EIKSMHGKDRLLLEFASNNEIQKFKSSGGIKSLLKDSEETNMEIVLHGKDIKAIQKTV
ISTLAEMNLCPVKMELIELSLENLFLEVVK"
misc_feature 354740..355657
/locus_tag="CD196_0309"
/note="ABC-type multidrug transport system, ATPase
component [Defense mechanisms]; Region: CcmA; COG1131"
/db_xref="CDD:31326"
misc_feature 354752..355384
/locus_tag="CD196_0309"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 354848..354871
/locus_tag="CD196_0309"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(354857..354862,354866..354874,354989..354991,
355214..355219,355310..355312)
/locus_tag="CD196_0309"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 354980..354991
/locus_tag="CD196_0309"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature 355142..355171
/locus_tag="CD196_0309"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 355202..355219
/locus_tag="CD196_0309"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 355226..355237
/locus_tag="CD196_0309"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 355298..355318
/locus_tag="CD196_0309"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 355657..356415
/locus_tag="CD196_0310"
/db_xref="GeneID:8463447"
CDS 355657..356415
/locus_tag="CD196_0310"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_003213359.1"
/db_xref="GI:260682074"
/db_xref="GeneID:8463447"
/translation="MREYIAFTKKEFKENIRNYKLLSLTILFLVFGIMSPLSAKFMPD
LIAHFAPTLKVTTAPTALDSWTQFSGNISGLGTSLTLIVFCNILSNEYSKGTLVIMLT
KGLSRSSVVLSKFSIAVIIMTIGFWLSFLCTYGYTMYFWPTANLNHIIFSAFNLWLIS
IMYISILILGCVLFRPAFASVLLVLAATAILSLISIPKQIAPYTPNFILSKNIDLVSG
KVTPPEFIIPIIVTIVISIVCLLLAVVLFNKKAV"
misc_feature 355681..>356082
/locus_tag="CD196_0310"
/note="ABC-2 type transporter; Region: ABC2_membrane;
cl11417"
/db_xref="CDD:214176"
gene 356798..357871
/locus_tag="CD196_0311"
/db_xref="GeneID:8463448"
CDS 356798..357871
/locus_tag="CD196_0311"
/codon_start=1
/transl_table=11
/product="iron-sulfur-binding protein"
/protein_id="YP_003213360.1"
/db_xref="GI:260682075"
/db_xref="GeneID:8463448"
/translation="MEKSKVYFCDLYSNSQNKNVPNNVRRLFDEAGFKDLIEKNDQVA
IKLHFGEKGNTTYMSPVAVRQVVDKVKDCEGKPFLTDTNTLYTGSRTNSVDHLTTAIE
NGFAYAVVNAPVIIADGLYSRNYENVKIDKKHFESVKIGGEIYNSSAMIVMSHFKGHE
AAGFGGALKNLAMGCASAAGKQMQHSDVTPVVKEKKCVGCGKCVNSCPTKAISIVDKK
AVIDSDVCYGCGECPTVCPTRAVTIQWESDSDVFVEKMAEYAYGAVSNKKDKVGYITF
VMNVTPLCDCVPWSGRPIAHDIGILASTDPVAIEQACYDLICKEMGHDVFKHEHPHVN
GTRIIDYACEMGMGSKEYELIKL"
misc_feature 356807..357868
/locus_tag="CD196_0311"
/note="Uncharacterized Fe-S center protein [General
function prediction only]; Region: COG2768"
/db_xref="CDD:32630"
gene 357941..358204
/locus_tag="CD196_0312"
/db_xref="GeneID:8463449"
CDS 357941..358204
/locus_tag="CD196_0312"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213361.1"
/db_xref="GI:260682076"
/db_xref="GeneID:8463449"
/translation="MKIYYEKENSKKANVNNIPSVFAFNFLRNFLTSKEYEETRKEYF
INNLTKSQVNQAMKDLKWLFREYEGLEVITMESLDGVKTRIVL"
gene 358410..359387
/locus_tag="CD196_0313"
/db_xref="GeneID:8463450"
CDS 358410..359387
/locus_tag="CD196_0313"
/codon_start=1
/transl_table=11
/product="biotin synthase"
/protein_id="YP_003213362.1"
/db_xref="GI:260682077"
/db_xref="GeneID:8463450"
/translation="MEKYIIKLKNKVLREKEISYEEALNLISLDTNNKNDFDILLKSA
NEIREYFMGRKADLCTIMNAKSGKCSEDCKFCAQSSHYKTGVEEYSLLDYNEILNRAK
EMESKGVHRFSLVTSGKGMSGKEFNNILNIYEGLRENTNLKLCASLGIIDYEQAKMLK
SAGVTTYHHNVETCRDNFHNICTTHTYKDRIKTIKDAKKAGLDVCVGGIIGMNESEEQ
RLKMVFEIRELNVKSFPINILNPIKNTPMENYDVLEPMEILKTTAVFRFIIPNVYIRY
AGGRLSLKGYDKVGFNGGVNSAIVGDYLTTVGSGIENDKKMIIEQGFEL"
misc_feature 358515..359381
/locus_tag="CD196_0313"
/note="biotin synthase; Region: bioB; TIGR00433"
/db_xref="CDD:200012"
misc_feature 358614..359195
/locus_tag="CD196_0313"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature order(358614..358616,358620..358622,358626..358628,
358632..358640,358752..358754,358758..358763,
358842..358850,358917..358919,359034..359036,
359121..359126)
/locus_tag="CD196_0313"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
misc_feature 359112..359381
/locus_tag="CD196_0313"
/note="Biotin and Thiamin Synthesis associated domain;
Region: BATS; pfam06968"
/db_xref="CDD:148534"
gene 359606..360628
/gene="rbsR"
/locus_tag="CD196_0314"
/db_xref="GeneID:8463451"
CDS 359606..360628
/gene="rbsR"
/locus_tag="CD196_0314"
/codon_start=1
/transl_table=11
/product="ribose operon repressor"
/protein_id="YP_003213363.1"
/db_xref="GI:260682078"
/db_xref="GeneID:8463451"
/translation="MNFLSITIKEIGELAGVSKTTVSKVINNKDENISQATREKILKI
MKEKNYVPNKLAQSLVTKKTNTIGLLIPDIRNPFFTDVSRGVEDKANEEGYNIILCNT
DEDAKKEYEGIRTLSERMIDGIIFAASSNTNWKEANYKDIKIPTVLIDKKISMNKETL
KGIVKINNFEGAYIATKHLLDIGNKKIIYLSGPLQNEIAVDRLEGYKKALIECNLSYN
SAYVFEGKYKIEWGQEFIKNLEKIDFDAIFCANDLIAIGVIRGLKERGLSIPNDVSVV
GFDDIQTSSLISPSLTTVKQPSYDIGYKASEILINCLRGDKKESFDELIFKPELVIRD
STKESE"
misc_feature 359621..360616
/gene="rbsR"
/locus_tag="CD196_0314"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:31797"
misc_feature 359630..359788
/gene="rbsR"
/locus_tag="CD196_0314"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature order(359630..359632,359654..359668,359672..359677,
359684..359686,359702..359707,359714..359716,
359753..359755,359762..359764,359771..359776,
359780..359785)
/gene="rbsR"
/locus_tag="CD196_0314"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature 359753..359782
/gene="rbsR"
/locus_tag="CD196_0314"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature 359801..360598
/gene="rbsR"
/locus_tag="CD196_0314"
/note="Ligand binding domain of the LacI tanscriptional
regulator family belonging to the type I
periplasmic-binding fold protein superfamily; Region:
PBP1_LacI_sugar_binding_like; cd06267"
/db_xref="CDD:107262"
misc_feature order(359801..359803,359840..359848,359855..359860,
359864..359869,359888..359902,359906..359908,
359939..359941,359948..359950,359957..359965,
360293..360295,360371..360373,360383..360385,
360392..360397)
/gene="rbsR"
/locus_tag="CD196_0314"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107262"
misc_feature order(359837..359842,359849..359851,359984..359986,
360053..360055,360101..360103,360209..360211,
360284..360286,360440..360442,360491..360493)
/gene="rbsR"
/locus_tag="CD196_0314"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107262"
gene 360670..361560
/gene="rbsK"
/locus_tag="CD196_0315"
/db_xref="GeneID:8466512"
CDS 360670..361560
/gene="rbsK"
/locus_tag="CD196_0315"
/codon_start=1
/transl_table=11
/product="ribokinase"
/protein_id="YP_003213364.1"
/db_xref="GI:260682079"
/db_xref="GeneID:8466512"
/translation="MGNIVVIGSVNMDMVCSVDKRPEKGETVLGNSFFTSPGGKGANQ
AISASKLGANVKMISCIGEDGLGEELIRNFRTNKVDYSLVSRNNHKSSGVAVITLCEN
DNSIVVVPGTNELVDIELIKKNEEEIKNADIVLLQLEIPLKTINYVVNFCFENRIKVL
LNPAPAVKLNEDIIEKVTYLTPNEHEYKIVFDTNEGIEEVLKKYPNKLVITEGKNGAR
FYDGEEIKHVSCISVDVQDTTGAGDTFNGALAVAITEGKKLYTAVEYAVVVSGLSVTK
LGAQSGMPYKEDVEKYLNNK"
misc_feature 360676..361554
/gene="rbsK"
/locus_tag="CD196_0315"
/note="Sugar kinases, ribokinase family [Carbohydrate
transport and metabolism]; Region: RbsK; COG0524"
/db_xref="CDD:30870"
misc_feature 360676..361524
/gene="rbsK"
/locus_tag="CD196_0315"
/note="Ribokinase catalyses the phosphorylation of ribose
to ribose-5-phosphate using ATP. This reaction is the
first step in the ribose metabolism. It traps ribose
within the cell after uptake and also prepares the sugar
for use in the synthesis of nucleotides...; Region:
ribokinase; cd01174"
/db_xref="CDD:29358"
misc_feature order(360700..360702,360706..360708,360781..360789,
360796..360798,360952..360954,360958..360960,
360985..360987,360991..360993,361084..361086,
361384..361389,361396..361398,361504..361506)
/gene="rbsK"
/locus_tag="CD196_0315"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29358"
misc_feature order(360709..360711,360715..360717,360730..360750,
360787..360789,360949..360951,360955..360963,
360976..360999,361162..361164)
/gene="rbsK"
/locus_tag="CD196_0315"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29358"
misc_feature order(361216..361218,361300..361308,361315..361317,
361354..361356,361372..361374,361381..361383,
361390..361395,361402..361404,361468..361470,
361477..361482,361489..361491)
/gene="rbsK"
/locus_tag="CD196_0315"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29358"
gene 361608..362570
/gene="rbsB"
/locus_tag="CD196_0316"
/db_xref="GeneID:8466511"
CDS 361608..362570
/gene="rbsB"
/locus_tag="CD196_0316"
/codon_start=1
/transl_table=11
/product="D-ribose ABC transporter substrate-binding
protein"
/protein_id="YP_003213365.1"
/db_xref="GI:260682080"
/db_xref="GeneID:8466511"
/translation="MRVRKILSLGIAGILAIGMLTGCSMEGPSKSDNKGGSDKKDLTI
GVSTITLQHQFFIDIDEGIKEKAKELGVKVIVNDPDQDVAKQTSAIEDFIQQNVDGMI
VLGTDNSAIVPAVEGAFEKMPVVTVDAVLNTENITSYVGTVSYDAGKKLGEYTKKYID
EKLGGKSEIAIVTDLKSQIQMQRIDGFKDALKGSANVKILNSQPGYDREESLNTVENL
IQSNPDVDIIYATAENSVLGAKAALESAKNKDVKIVGFDLTEEASSGITDGTILAMIQ
QQPKEMGRLAVEAVVKAIKGEKVEKNIPVPALLYDKENIKDFKN"
misc_feature 361734..362525
/gene="rbsB"
/locus_tag="CD196_0316"
/note="Periplasmic sugar-binding domain of active
transport systems that are members of the type I
periplasmic binding protein (PBP1) superfamily; Region:
PBP1_ABC_sugar_binding_like; cd01536"
/db_xref="CDD:107249"
misc_feature 361737..362501
/gene="rbsB"
/locus_tag="CD196_0316"
/note="Periplasmic binding protein domain; Region:
Peripla_BP_4; pfam13407"
/db_xref="CDD:205585"
misc_feature order(361770..361772,361989..361991,362154..362156,
362376..362378,362436..362438)
/gene="rbsB"
/locus_tag="CD196_0316"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107249"
gene 362624..364135
/gene="rbsA"
/locus_tag="CD196_0317"
/db_xref="GeneID:8466509"
CDS 362624..364135
/gene="rbsA"
/locus_tag="CD196_0317"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter ATP-binding protein"
/protein_id="YP_003213366.1"
/db_xref="GI:260682081"
/db_xref="GeneID:8466509"
/translation="MSNIILKLSNIAKEFPGVRALDNVNFELFHGEVHALLGENGAGK
STMIKILTGAHSKTSGKFIFEGKEIENISPDISKKIGINAIYQELTVFDELTVAQNIF
MGKEINGKVLTNDKKMNEEAKKIFDNMGIDINPNSLVKELSIAQKQMVEIARVLSSET
KVLIMDEPTSSISKKETEILFRLINDLKESGVSIIYISHRMEELFEICDRITIMRDGK
TISTLNTKDVSSEEELVNLMIDRKLDQFFPKRKVEIKEEIMRVENLTKNNVFNDISFN
IRKGEILGIGGLVGSKRSEIVEAIFGLRTYDSGKIYLNNEEVKFKTPSDAIENGLGLI
TEDRKGTGLFLQMSVKENTTMAGLKKISKFKSIIDRKKEKEILEKYIEALKIKTPHMN
QVIQSLSGGNQQKAIIARWLLLQPDILIMDEPTRGIDVNAKAEIYNLMGDLVESGVSI
IMISSEIPELISMSDRIMVMREGHISGFLEGEEMVENNVLKLAFGGKINEFNN"
misc_feature 362624..364111
/gene="rbsA"
/locus_tag="CD196_0317"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:31325"
misc_feature 362639..363289
/gene="rbsA"
/locus_tag="CD196_0317"
/note="First domain of the ATP-binding cassette component
of monosaccharide transport system; Region:
ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:213183"
misc_feature 362735..362758
/gene="rbsA"
/locus_tag="CD196_0317"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213183"
misc_feature order(362744..362749,362753..362761,362882..362884,
363119..363124,363218..363220)
/gene="rbsA"
/locus_tag="CD196_0317"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213183"
misc_feature 362873..362884
/gene="rbsA"
/locus_tag="CD196_0317"
/note="Q-loop/lid; other site"
/db_xref="CDD:213183"
misc_feature order(362906..362917,363059..363076)
/gene="rbsA"
/locus_tag="CD196_0317"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213183"
misc_feature 363107..363124
/gene="rbsA"
/locus_tag="CD196_0317"
/note="Walker B; other site"
/db_xref="CDD:213183"
misc_feature 363131..363142
/gene="rbsA"
/locus_tag="CD196_0317"
/note="D-loop; other site"
/db_xref="CDD:213183"
misc_feature 363206..363226
/gene="rbsA"
/locus_tag="CD196_0317"
/note="H-loop/switch region; other site"
/db_xref="CDD:213183"
misc_feature 363389..364048
/gene="rbsA"
/locus_tag="CD196_0317"
/note="Second domain of the ATP-binding cassette component
of monosaccharide transport system; Region:
ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:213182"
gene 364119..365117
/gene="rbsC"
/locus_tag="CD196_0318"
/db_xref="GeneID:8466508"
CDS 364119..365117
/gene="rbsC"
/locus_tag="CD196_0318"
/codon_start=1
/transl_table=11
/product="ribose ABC transporter permease"
/protein_id="YP_003213367.1"
/db_xref="GI:260682082"
/db_xref="GeneID:8466508"
/translation="MSSITKHKEEKSSPLLTKLTSVFRDQGSAAVGLVIIFIIMSVAS
SNFLTLDNLINVGRQISINAILAVGMTFVIITGGIDLSVGAVIALVGTFWATTVVNYN
APIWVGMILALAIGTILGVIKGAIISTQKLPPFIVTLAMLTIISGASFVFTGGRPISV
NTDAFKMLGRGYIGPIPIPVIIMIIVVIAGHFLLKRTNFGRHVHAVGGNEEAARLCGV
KVNKVIVKVYALAGLLTALAGIILSSRLASGSPTVGDGAELDAIAAVVLGGTNMMGGS
GSIVGTCIGVGIIGILGNGLNLLSVSSYNQMIIKGLVMLFAIWINNIKLKKSAKSK"
misc_feature 364200..364928
/gene="rbsC"
/locus_tag="CD196_0318"
/note="ABC-type branched-chain amino acid transport
system, permease component [Amino acid transport and
metabolism]; Region: LivM; COG4177"
/db_xref="CDD:33917"
misc_feature 364296..365081
/gene="rbsC"
/locus_tag="CD196_0318"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature 364749..364805
/gene="rbsC"
/locus_tag="CD196_0318"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene 365301..366563
/gene="argE"
/locus_tag="CD196_0319"
/db_xref="GeneID:8466510"
CDS 365301..366563
/gene="argE"
/locus_tag="CD196_0319"
/codon_start=1
/transl_table=11
/product="acetylornithine deacetylase"
/protein_id="YP_003213368.1"
/db_xref="GI:260682083"
/db_xref="GeneID:8466510"
/translation="MKKILLDTLNSKKQEYIDYLKELVSIKTEDVGHGILGGFEKEGQ
EYIEKLANYIGFSVDRQEMSEELIKKAKNIYKEGNLGHNYQDRYNLICKYSDDLPGKT
IVFNGHVDTMPPGDISKWKYNPYRATEDNGKLYGLGTADMKSGLIASILAVKLIKDSG
LNVPGNVKIMSVVDEEGGGNGTINAVMNGIGGDCCIICEPSEQNLIVAHMGFVFFEVE
VKGVSLHCGSKWEGVNAIEKAMLLLQDIKELEHNWLMIYKHPLLPSPTINLGVINGGT
AGSTVPDKCVFNLCVHFLPNIMSYEQVVNDVTNVIMTRANGDLWLKDNKPNINIYQSG
LGFQMDKDSDFVVNAHKILEETLGKKLEIKGSTAGNDARLMKNLAEIPTLILGPGSIE
QCHSIDEYVEIKEYLDSILMYASLILNL"
misc_feature 365349..366533
/gene="argE"
/locus_tag="CD196_0319"
/note="acetylornithine deacetylase or
succinyl-diaminopimelate desuccinylase; Region: DapE-ArgE;
TIGR01910"
/db_xref="CDD:162596"
misc_feature 365352..366554
/gene="argE"
/locus_tag="CD196_0319"
/note="Zinc peptidases M18, M20, M28, and M42; Region:
Zinc_peptidase_like; cl14876"
/db_xref="CDD:213133"
misc_feature order(365622..365624,365721..365723,365823..365828,
365895..365897,366483..366485)
/gene="argE"
/locus_tag="CD196_0319"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193495"
gene 366583..367326
/locus_tag="CD196_0320"
/db_xref="GeneID:8465845"
CDS 366583..367326
/locus_tag="CD196_0320"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213369.1"
/db_xref="GI:260682084"
/db_xref="GeneID:8465845"
/translation="MKKVLIVGESWVKNITHIKGFDTFVTTHYEEAVKWLKEAIESGG
YETVHMPAHVAADSFPYKLEELNEYDCIILSDIGSNTFLLSNSTFIDCNSNPDRLELI
KEYVNNGGALIMVGGYMSFTGIDAKARFGETAIKDVLPITMIDKDDRVEKPAGIIPEV
IDSEHPVLKGIPTEWPKFLGYNKTVARDNCPVLATIGGDPFVAVGEFGKGKSAIFSSD
CAPHWGPKEFTDWKYYNKLWVNMLDWLTC"
misc_feature 366586..367320
/locus_tag="CD196_0320"
/note="Type 1 glutamine amidotransferase (GATase1)-like
domain; Region: GAT_1; cl00020"
/db_xref="CDD:213412"
misc_feature 366934..366936
/locus_tag="CD196_0320"
/note="conserved cys residue [active]"
/db_xref="CDD:153222"
gene 367499..368884
/gene="abgB1"
/locus_tag="CD196_0321"
/db_xref="GeneID:8463452"
CDS 367499..368884
/gene="abgB1"
/locus_tag="CD196_0321"
/codon_start=1
/transl_table=11
/product="aminobenzoyl-glutamate utilization protein"
/protein_id="YP_003213370.1"
/db_xref="GI:260682085"
/db_xref="GeneID:8463452"
/translation="MDNLNKKFLMEYIDEIQGELRDISDKIWKNPELQYKEYYASNLQ
KECLKKHGFSIEGLEGMDTAFVASYGEGRPVIAVLGEYDALDGLSQKVSTTKEPIVDG
GAGHGCGHNLLGTGSIGAVIAVKELIKLKKLKGTIKYYGCPAEEDLSGKVLMIKKGFF
DGIDCAFSWHPFDINTPIRIPTLANYSVKFRYNGISAHAAQAPYNGRSALDAVELMNI
GCNYLREHIFDNCRVHYVTTNGGKMPNIVPDFAEVWYYIRGVKMEHVRDVFGRIVDIA
KGAALMTGTIMEYDIISGVYDYIPNTILTDILSQNMKLVGVQNYNEDDYYFADKLAET
VSIDKRSSVSSVLSGNKDITKMNLHDEVTDDTFTHNNCISLSLDIGDVSYIIPTAQCS
CSVWPIGISAHTWQSCASAGSDMGFKAMLLASKSISCSINDVMLDELVINKAKKELKD
TVGSFEYTPII"
misc_feature 367535..368842
/gene="abgB1"
/locus_tag="CD196_0321"
/note="M20 Peptidase Aminoacylase 1-like protein 2
aminobenzoyl-glutamate utilization protein B subfamily;
Region: M20_Acy1L2_AbgB; cd05673"
/db_xref="CDD:193548"
misc_feature order(367820..367822,367826..367828,367934..367936,
368006..368008,368705..368707)
/gene="abgB1"
/locus_tag="CD196_0321"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:193548"
gene complement(369221..369865)
/locus_tag="CD196_0322"
/db_xref="GeneID:8465800"
CDS complement(369221..369865)
/locus_tag="CD196_0322"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213371.1"
/db_xref="GI:260682086"
/db_xref="GeneID:8465800"
/translation="MNNLDKNNVNEVLDMLLRTRRSIRSFTKEVPSKGLIEEIIETGR
LAPYAILSVAKQTDFRHFFVISNNSLQMNKIKTILVDVIKTQISVNEKKAKNNITLQS
FITSLKMQVEKGVLGIGTAPYLIIVAERRGIPPIEQKSLSHVMQNMWLKSTALGLGFE
LVSVIGRLSDNKDFCDILGVPTGEYGFDACAIGFPTTSVTREGRAIPHPSIKWI"
misc_feature complement(369284..369817)
/locus_tag="CD196_0322"
/note="Nitroreductase family; Region: Nitroreductase;
pfam00881"
/db_xref="CDD:201487"
misc_feature complement(order(369368..369370,369377..369379,
369737..369739,369791..369793,369797..369799,
369803..369805))
/locus_tag="CD196_0322"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73303"
misc_feature complement(order(369416..369418,369425..369430,
369437..369442,369446..369448))
/locus_tag="CD196_0322"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:73303"
gene 370129..370743
/locus_tag="CD196_0323"
/db_xref="GeneID:8463453"
CDS 370129..370743
/locus_tag="CD196_0323"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003213372.1"
/db_xref="GI:260682087"
/db_xref="GeneID:8463453"
/translation="MKKVSIDRRTIRTKKMIRSALAELIDEKGFNNISVTDLTQRADI
NRGTFYLHYVDKYDLLERIENEIIQEIEEETKHLDSSNMMEIDTSSEPLPFMVKLFEY
FRKNSVIIKSILGPKGDPTFERKIKKFIETNLFEKQKLINFNIDEAIISEEYFIQYIL
SADLGVIQYWLEKNMKESPEEMALILARMSLLGPLRAVGIRKDS"
misc_feature 370177..370308
/locus_tag="CD196_0323"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
misc_feature 370387..370644
/locus_tag="CD196_0323"
/note="Transcriptional regulator C-terminal region;
Region: TetR_C_8; pfam14278"
/db_xref="CDD:206446"
gene 372479..373390
/locus_tag="CD196_0324"
/db_xref="GeneID:8463454"
CDS 372479..373390
/locus_tag="CD196_0324"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213373.1"
/db_xref="GI:260682088"
/db_xref="GeneID:8463454"
/translation="MHYKINELENKYNLYNKVVQKGVFMFGYVKINKMDLTFREYDYY
KAYYCGLCKYLKRNHGEISRFSLNYDITFLIVLLTAVYNPESISTEEVCIVNPFKKKK
VITNDITEYAASMNILLTYYKLEDNLMDDKRIKDKLAYYIYKNKLKLAYEKYPEKAEY
IKQQLNELNKLEKDKNINIDEVSSIFGNIMGEVFVYKKDENERNLRMIGFNIGKYIYL
LDAYEDLDEDFKKGRYNPFIEYIDKNDELKEKVKKIIVTSLGFLARGIDNLNLNKNVG
IIENIIYSGVYLRYINILESRGGKNVQ"
gene 373380..373823
/locus_tag="CD196_0325"
/db_xref="GeneID:8463455"
CDS 373380..373823
/locus_tag="CD196_0325"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213374.1"
/db_xref="GI:260682089"
/db_xref="GeneID:8463455"
/translation="MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLT
GFSAMNIGYYEEGEDFLKRAKFMEPENSEYSDALRSYTQYRNDYSNRADNYNRRRRND
LDGCCCCCCDDCCCCLGDDCCENCAKLWCLDSCCECFGGDLITCC"
misc_feature 373410..373595
/locus_tag="CD196_0325"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:205610"
gene 373825..374325
/locus_tag="CD196_0326"
/db_xref="GeneID:8463456"
CDS 373825..374325
/locus_tag="CD196_0326"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213375.1"
/db_xref="GI:260682090"
/db_xref="GeneID:8463456"
/translation="MINMSIKVAYGGVLLALNVILLTLTNIIPVNTLFIMGLASLLVS
IVIMEWGFKSGIAFYIGSIVLGFIVMASKSQWIVYSLTFGIYGIVKYLIEKDRSIYIE
YFMKLVFANIMILILYFLLRTIVYIPINIFIIGSFEIAFIVYDYVYSSFIGYYNNRLR
KMLFKK"
gene complement(374527..375255)
/locus_tag="CD196_0327"
/db_xref="GeneID:8463457"
CDS complement(374527..375255)
/locus_tag="CD196_0327"
/codon_start=1
/transl_table=11
/product="phosphoserine phosphatase"
/protein_id="YP_003213376.1"
/db_xref="GI:260682091"
/db_xref="GeneID:8463457"
/translation="MKNIAAFFDIDGTLYRDSLMVEHFKKLIKYDIIDQKNWYKHARD
TFMDWDKRQGNYDDYLLEICDLYVDSLKGLDKTCINFTSDQVIKLKADRVYKYTRSRI
EWHLNQGHIVIFISGSPGFLVEKMAKKYNVTDFLGSDYVFENNIFTGTVIPMWDSISK
NNAINDFVVKYDLDLSNSYAYGDTNGDINMLKRVGNPIAINPTKELLSQISLDEEISK
NVEIIVERKDIIYSLSTDVNIVDI"
misc_feature complement(374626..375255)
/locus_tag="CD196_0327"
/note="Phosphoserine phosphatase [Amino acid transport and
metabolism]; Region: SerB; COG0560"
/db_xref="CDD:30906"
misc_feature complement(374638..375243)
/locus_tag="CD196_0327"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:214172"
gene 375380..376468
/locus_tag="CD196_0328"
/db_xref="GeneID:8463458"
CDS 375380..376468
/locus_tag="CD196_0328"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213377.1"
/db_xref="GI:260682092"
/db_xref="GeneID:8463458"
/translation="MNFNFAKATNSRLMGSLGLIINWIDDENNHFCQYFLLDAEGLGL
ADYVSLNNPTQEEAYMEEERLMGGFGSDRVELTKDESLFLVSYFGNKNLYYDKLLPGD
KCEYIDIIKNYKTDLIIEKLYNKICKRVDEEVEFINYMTMRFIAWDRESLKYFSGSDE
IANMHITNINGTLLKNVVSDKGQGRYISEALYEDNDGYYICKIAFCISKCYETGFRIN
SLLVTDKELMYDFEVFDEISKSEFVSVYSVNSPEEFAGVFYRENPFLLKSNMNEGIFF
TRFNFNNDHVKENVYIINNDMKAIYYLMGNKFFIGTYNENDCNYINEISQSNYSDYIK
FEEKFFFEQNALYDFAESGSLDFDDFLE"
gene complement(376906..377754)
/locus_tag="CD196_0329"
/db_xref="GeneID:8463459"
CDS complement(376906..377754)
/locus_tag="CD196_0329"
/codon_start=1
/transl_table=11
/product="spore coat assembly asparagine-rich protein"
/protein_id="YP_003213378.1"
/db_xref="GI:260682093"
/db_xref="GeneID:8463459"
/translation="MSNKKKKDLDTSYMPYLDPANYADYITNEEIPQDELRNDPQISN
GYTKIPNNQNINNLYPNNVNHYPKSSNSPNNLPNTNNTSGNMNYNTSATNNMPNNMNN
NTGMPNNMSNNMNSNMGMPNNMPNNMNSNMGMPNNMSNNMNSNMGMPNNMPNNMNSNM
GMPNNMPNNMNSNMGMPNNMPNNMNSNMGMPNNVPNNMNSNMGYNMNNTMGIPNFSCN
QNMPPNVLMMIPGVICHNTMQGMPVVMPSTMPPNIYPTPYGSSNMSIQGIPQATNIEE
FDEEEM"
gene 377953..378318
/locus_tag="CD196_0330"
/db_xref="GeneID:8463460"
CDS 377953..378318
/locus_tag="CD196_0330"
/codon_start=1
/transl_table=11
/product="ArsR family transcriptional regulator"
/protein_id="YP_003213379.1"
/db_xref="GI:260682094"
/db_xref="GeneID:8463460"
/translation="MREEINDCNCNIVHEEIVTEAKSTMPDEEMLYDLAELFKVFGDT
TRVKILYALFANEMCVCDIASLLNMTHSAISHQLRVLKQARLVKFRREGKTVYYSLDD
SHISQIFDCGLNHIRETYK"
misc_feature 378064..378258
/locus_tag="CD196_0330"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature order(378064..378069,378073..378075,378082..378084,
378091..378096,378103..378108,378115..378117,
378205..378207)
/locus_tag="CD196_0330"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:28974"
misc_feature order(378067..378072,378082..378090,378127..378135,
378160..378171,378175..378180,378187..378192,
378196..378201,378217..378225,378238..378246)
/locus_tag="CD196_0330"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(378127..378129,378136..378138)
/locus_tag="CD196_0330"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
gene 378341..380728
/locus_tag="CD196_0331"
/db_xref="GeneID:8463461"
CDS 378341..380728
/locus_tag="CD196_0331"
/codon_start=1
/transl_table=11
/product="heavy-metal-transporting ATPase"
/protein_id="YP_003213380.1"
/db_xref="GI:260682095"
/db_xref="GeneID:8463461"
/translation="MEANNLIKKEFILGGLNCAHCAEEINNKVSKLQEVKSSNLNFIN
KKLIVNIKESFNEDTTIEKIIDIIDSTEPGLDIQISSKENASSKTSIKKELILGGLNC
AHCAEEINNKVSKLKEVESSNLNFVNKKLTVNISNNFKEDDVINKIKEIINSTEPGLD
IQVGSTDKVKGRTTEKSGAVNDTNKKELVPLIIGALVYIFGIYQTATGYESQFSNIVF
IVAYVIVGGDVLLRAIRNISKGRVFDENFLMALATVGALTIGESSEAVGVMLFYKVGE
YLQGVAVGKSRKSITSLMQIRPDYANLKFNSEVKVVSPEEVNVGDIIVVKPGEKVPLD
GVVVDGVSMLDTSALTGESVLREVEKGDEILSGVINKNALLSIEVTKSFGESTVSKIL
DLVENSSIKKSKTENFISKFSRYYTPIVVIAALLIAFVPPLVISGEVFSDWLYRGLIF
LVVSCPCALVLSIPLSFFSGIGFASKNGILIKGSNYLEALRSVDTVVFDKTGTLTKGV
FNVTKLNPEGISEEELLEYAAIAEVNSNHPIAKSILSYYNKKIDLDTIDSYEEIAAYG
IRVKHNGNFILAGNEKLMKKENISYSSAKEVGTVVYIAVDKVYRGYIVISDEVKEDSK
NAIRSLKAIGVKEVVMLTGDNEKVAKNIAQELELDTVYSNLLPNEKVDRLEDLYEGRT
EKEKIAFVGDGINDAPVLARADVGIAMGGLGSDAAIEAADVVLMTDEPSKISKAIEIA
NKTNKIVWQNIIFALGVKIIVMILGAGGVATMWEAIFADVGVALIAVVNAMRAMR"
misc_feature 378368..>378487
/locus_tag="CD196_0331"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cl00207"
/db_xref="CDD:206901"
misc_feature order(378386..378394,378401..378403)
/locus_tag="CD196_0331"
/note="metal-binding site [ion binding]"
/db_xref="CDD:29471"
misc_feature 378614..380725
/locus_tag="CD196_0331"
/note="Cation transport ATPase [Inorganic ion transport
and metabolism]; Region: ZntA; COG2217"
/db_xref="CDD:32399"
misc_feature 378620..378790
/locus_tag="CD196_0331"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:29471"
misc_feature order(378638..378646,378653..378655)
/locus_tag="CD196_0331"
/note="metal-binding site [ion binding]"
/db_xref="CDD:29471"
misc_feature 379142..379807
/locus_tag="CD196_0331"
/note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
/db_xref="CDD:201018"
misc_feature 379994..380440
/locus_tag="CD196_0331"
/note="haloacid dehalogenase-like hydrolase; Region: HAD;
pfam12710"
/db_xref="CDD:205034"
gene 381223..382847
/gene="16SrRNA"
/locus_tag="CD196_r13"
/db_xref="GeneID:8463462"
rRNA 381223..382847
/gene="16SrRNA"
/locus_tag="CD196_r13"
/product="16S ribosomal RNA"
/db_xref="GeneID:8463462"
gene 383132..386084
/gene="23SrRNA"
/locus_tag="CD196_r14"
/db_xref="GeneID:8465773"
rRNA 383132..386084
/gene="23SrRNA"
/locus_tag="CD196_r14"
/product="23S ribosomal RNA"
/db_xref="GeneID:8465773"
gene 386157..386273
/gene="5SrRNA"
/locus_tag="CD196_r15"
/db_xref="GeneID:8465783"
rRNA 386157..386273
/gene="5SrRNA"
/locus_tag="CD196_r15"
/product="5S ribosomal RNA"
/db_xref="GeneID:8465783"
gene 386451..387059
/locus_tag="CD196_0332"
/db_xref="GeneID:8465793"
CDS 386451..387059
/locus_tag="CD196_0332"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213381.1"
/db_xref="GI:260682096"
/db_xref="GeneID:8465793"
/translation="MSVINSFILQYGLISVFVLIMIEYACFPLPSEVVLPLCGAIAAR
NHFGFLTILILSIIAGILGSIFCYTVGNWGGKSIINKIIEICPKAKKGIFASQDYFNK
YSSISVCVCRLIPLCRTYISFIAGIAGQNIITFVISSIVGITIWNTSLISIGYIFSES
WVRIMSHYNDYKFLVLIIPISIIFIGFVIKSFIHKKHHKIRL"
misc_feature 386481..386963
/locus_tag="CD196_0332"
/note="Uncharacterized membrane-associated protein
[Function unknown]; Region: DedA; COG0586"
/db_xref="CDD:30931"
misc_feature 386535..386915
/locus_tag="CD196_0332"
/note="SNARE associated Golgi protein; Region:
SNARE_assoc; pfam09335"
/db_xref="CDD:204201"
gene 387081..387293
/locus_tag="CD196_0333"
/db_xref="GeneID:8463463"
CDS 387081..387293
/locus_tag="CD196_0333"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213382.1"
/db_xref="GI:260682097"
/db_xref="GeneID:8463463"
/translation="MYKVIKTVEKIEGVVNLHKHYVFVGSRRFFYCLCLWYFFLKMYH
VLHFVEDKFAYIEEKAAALKIKTTTL"
gene complement(387600..388373)
/locus_tag="CD196_0334"
/db_xref="GeneID:8463464"
CDS complement(387600..388373)
/locus_tag="CD196_0334"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_003213383.1"
/db_xref="GI:260682098"
/db_xref="GeneID:8463464"
/translation="MWKLLWAECQKIRRSKIVWITFFASIMIAVIVFAGGQDVYNDPD
LHYGLKSVYDGSRYIDNAGWYMDAVQPWSTFFVLPAVIALLGSYIICREEEEDTIKSL
RLIPINETKLTIAKMIITFIFSILLYLLLFTITFLTESVLHFSDLSTKLVLSCMKEYF
LDGIGVFFAISPIIALVSRMKKGYWLALVFTEVYSIAGLFAGMSNVLQTFFPIAAIFN
ISGYYITTGEKIMGSIISLLLCACLSAFILKGLKHNEKN"
misc_feature complement(<388023..388370)
/locus_tag="CD196_0334"
/note="ABC-2 type transporter; Region: ABC2_membrane;
cl11417"
/db_xref="CDD:213123"
misc_feature complement(387699..388355)
/locus_tag="CD196_0334"
/note="ABC-2 family transporter protein; Region:
ABC2_membrane_4; pfam12730"
/db_xref="CDD:205048"
gene complement(388384..389121)
/locus_tag="CD196_0335"
/db_xref="GeneID:8463465"
CDS complement(388384..389121)
/locus_tag="CD196_0335"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_003213384.1"
/db_xref="GI:260682099"
/db_xref="GeneID:8463465"
/translation="MLKLIQTEFLKLRRRKLIWLMLLSALIMPFFALLYFNYFGKTGV
EPTKFYKWSAFGYTLWIILPVVLGIFCTMLIHEENQYDMLKQLWIVPISKMGYFFSKF
FVVLIYSICFMLITAVASVLFSVLSGYVVFSWASILYLLKKCLEIGVITAFVMLPILA
IATSQKGYILPICITLVYAFSGFVIMTINMYLHPLSSMGVIIMRNKDIPGLIFSQEIN
VPLAFLCICIWSIVSVLFASIALGRRK"
misc_feature complement(<388732..389115)
/locus_tag="CD196_0335"
/note="ABC-2 type transporter; Region: ABC2_membrane;
cl11417"
/db_xref="CDD:214176"
misc_feature complement(388417..389100)
/locus_tag="CD196_0335"
/note="ABC-2 family transporter protein; Region:
ABC2_membrane_4; pfam12730"
/db_xref="CDD:205048"
gene complement(389114..390103)
/locus_tag="CD196_0336"
/db_xref="GeneID:8463466"
CDS complement(389114..390103)
/locus_tag="CD196_0336"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_003213385.1"
/db_xref="GI:260682100"
/db_xref="GeneID:8463466"
/translation="MILTLYQLSFVETNLLKVRKLYMNDFVIETKQLTKIYGNQTVVD
KVNLHVKKGRIYGLLGRNGAGKTTIMKMILGLTSITYGEVDVFGENIKGCEKRVYPRI
GAIIETPGFYPNLTGTENLEIFAKLRGTAAPNSVKRALEIVGLPYKNKKLFSKYSLGM
KQRLGIANAILHDPELLVLDEPTNGLDPIGIAEMRKFIRDLSVEHGKTILISSHILSE
ISLLADDIGIIDHGVLLEESSMSELEKKNSKYILLQVSDIPKTSLILERQFNTKDYSV
QDDHTLRLYNTTLDMGEINKALVMQNVTVISSQLCNDTLEDYFKKITGGEGIA"
misc_feature complement(389129..390025)
/locus_tag="CD196_0336"
/note="ABC-type multidrug transport system, ATPase
component [Defense mechanisms]; Region: CcmA; COG1131"
/db_xref="CDD:31326"
misc_feature complement(389408..390022)
/locus_tag="CD196_0336"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(389903..389926)
/locus_tag="CD196_0336"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(389462..389464,389561..389566,
389783..389785,389900..389908,389912..389917))
/locus_tag="CD196_0336"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(389783..389794)
/locus_tag="CD196_0336"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(389609..389638)
/locus_tag="CD196_0336"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(389561..389578)
/locus_tag="CD196_0336"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(389543..389554)
/locus_tag="CD196_0336"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(389456..389476)
/locus_tag="CD196_0336"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene complement(390194..391117)
/locus_tag="CD196_0337"
/db_xref="GeneID:8463467"
CDS complement(390194..391117)
/locus_tag="CD196_0337"
/codon_start=1
/transl_table=11
/product="two-component sensor histidine kinase"
/protein_id="YP_003213386.1"
/db_xref="GI:260682101"
/db_xref="GeneID:8463467"
/translation="MNTSVYLLLILALSLIIIAYLVSVLLRVRIQLTLIKDALEDIKN
GNLNRRILTDENDITKQICYDINEIAINSQFQLIQQKQSEQAYKQLMTSLSHDVKTPL
ASLVGYLEAVESKIVVGEEKDEYIHVASNKAHYLKNFVENLFEWVKLDSKEQVFHFDI
FDLNELSRNIISDWIPVLESSHFEYEFDIPEIEYFLRIDANAYTRIINNLLQNIITHS
SGNKMTLRIFENKEQAQIIITDNGKGISSDNLPHIFERLYQCDHSRASKGNGLGLAIA
KELINAHKGNITANSTPGMGTEFTILLPKAL"
misc_feature complement(390200..391039)
/locus_tag="CD196_0337"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature complement(390674..390868)
/locus_tag="CD196_0337"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(390689..390691,390701..390703,
390710..390712,390722..390724,390731..390733,
390743..390745,390794..390796,390803..390805,
390815..390817,390824..390826,390836..390838,
390848..390850))
/locus_tag="CD196_0337"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(390830..390832)
/locus_tag="CD196_0337"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(390209..390505)
/locus_tag="CD196_0337"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(390221..390223,390227..390232,
390245..390247,390251..390253,390299..390310,
390383..390388,390392..390394,390398..390400,
390404..390406,390470..390472,390479..390481,
390491..390493))
/locus_tag="CD196_0337"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(390479..390481)
/locus_tag="CD196_0337"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(390302..390304,390308..390310,
390386..390388,390392..390394))
/locus_tag="CD196_0337"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(391119..391853)
/locus_tag="CD196_0338"
/db_xref="GeneID:8463468"
CDS complement(391119..391853)
/locus_tag="CD196_0338"
/codon_start=1
/transl_table=11
/product="two-component response regulator"
/protein_id="YP_003213387.1"
/db_xref="GI:260682102"
/db_xref="GeneID:8463468"
/translation="MVERKEERKYNMNSVLIIDDDKELCALMKKCVEQENLSAITAHC
GAEGLHLLDKNRHTLSLVILDIMMPDIDGFQVLKKIRETSNIPVIMLTAKNDEDDKVS
GLRLGADDYLTKPFSINELMARVNSLIRRYTMLNPAFITDTDCIIINGMIIDKTNRIV
SINNIPVQLTSKEFDLLAFLASNKGRVFTKKQIYTQVWEEEYAFDDSNIMSFISKLRK
KIEPDPNHPFYILTVRGVGYRFNKEA"
misc_feature complement(391122..391811)
/locus_tag="CD196_0338"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature complement(391467..391808)
/locus_tag="CD196_0338"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(391509..391514,391521..391523,
391578..391580,391635..391637,391659..391661,
391794..391799))
/locus_tag="CD196_0338"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(391659..391661)
/locus_tag="CD196_0338"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(391635..391643,391647..391652))
/locus_tag="CD196_0338"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(391506..391514)
/locus_tag="CD196_0338"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(391134..391418)
/locus_tag="CD196_0338"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature complement(order(391143..391145,391158..391160,
391194..391199,391221..391223,391230..391232,
391284..391289,391344..391346))
/locus_tag="CD196_0338"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene complement(391813..392001)
/locus_tag="CD196_0339"
/db_xref="GeneID:8463469"
CDS complement(391813..392001)
/locus_tag="CD196_0339"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213388.1"
/db_xref="GI:260682103"
/db_xref="GeneID:8463469"
/translation="MEYMSCPEVAKKWGISERRVQKLCEESRIPGVSKLGYMWLIPKN
AEKPVDGRAKRRKEVQYE"
misc_feature complement(<391873..391995)
/locus_tag="CD196_0339"
/note="Helix-turn-helix domain; Region: HTH_17; pfam12728"
/db_xref="CDD:205047"
gene 392230..393159
/locus_tag="CD196_0340"
/db_xref="GeneID:8463470"
CDS 392230..393159
/locus_tag="CD196_0340"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213389.1"
/db_xref="GI:260682104"
/db_xref="GeneID:8463470"
/translation="MDIIDNLRVQGVDEKLIEDVLYFRNYYGLEKDLEYRVTKSKTYF
YGKDILSMCIAAILEEENILLSGPKATGKNLLADNLGEIFNRPQWNTSFHINTDSSTL
IGTDTFIDNEVKLRRGSVYECAINGGFGVFDEINMAKNDAIVVVHSALDYRRIIDVPG
YERVNLHPATRFIGTMNYEYAGTKELNEALVSRFMVIDIPPIEEDKLMMILKNEFSDA
DEEKLIHFAGIFLDLQLKSQNGEISSKAIDLRGLMASLKTIRRGLKPTLAINMGLTGK
TFDVYEKEMVGDVIKTRIPNKWESIDVFPISHI"
misc_feature 392314..>392901
/locus_tag="CD196_0340"
/note="MoxR-like ATPases [General function prediction
only]; Region: COG0714"
/db_xref="CDD:31058"
misc_feature 392413..392811
/locus_tag="CD196_0340"
/note="AAA domain (dynein-related subfamily); Region:
AAA_5; pfam07728"
/db_xref="CDD:203741"
gene 393173..394945
/locus_tag="CD196_0341"
/db_xref="GeneID:8463471"
CDS 393173..394945
/locus_tag="CD196_0341"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213390.1"
/db_xref="GI:260682105"
/db_xref="GeneID:8463471"
/translation="MKWIYDDYEFENRANNLSWTIAGDYNESIDISEKDYSSKEIGLY
FAIIAGARRKYVDWDIVKKYLTNRIRKGYNKDIILGLIQVILNTIVEEKVIKDRPGIE
DIRRNAYKDIVSRFTKIHNDNIMDKIKYTFVLYNMDKHPALDSMTRRIVNDIRNIDTN
QDMMEILKALDVIYLTYFEYILNGEENSLIDENNVESVEVNFDTFADFMYEELYSDEE
ENIIESDIDSISSSMLVEGVGDFDDSKCSNSADRVIYVDEDTANKIYSKIEHYYGKTY
LSKGEIKKIETQNCRNVHEGCRIHFTDGVLRSECNNVFQLKYVTRQKENNLGKFREHA
RMYRQQIKRLKESLSRILIEENAKSRVYSDCGTILANRAWRVGRSNNNKIFYKDIENE
KGKYVIDILLDASGSQSRNQGNVAIQAYIIANALTEVGIPNRVMGFSSFLDYTILKRF
KDYDDSIKNSENIFEYFCAGNNRDGLAIKSICSGLINRDEENKILIVLSDGRPNDVKI
GKSSERTLRGEKAYRGIVGLRDTANEVRKARKQNILVLGVFTGKESELEAERLIYGND
FIYSRDITRFSDVVSMYLKKIIRN"
misc_feature 394358..394831
/locus_tag="CD196_0341"
/note="Von Willebrand factor type A (vWA) domain was
originally found in the blood coagulation protein von
Willebrand factor (vWF). Typically, the vWA domain is made
up of approximately 200 amino acid residues folded into a
classic a/b para-rossmann type of...; Region: vWFA;
cl00057"
/db_xref="CDD:213414"
misc_feature order(394379..394381,394586..394588,394670..394672)
/locus_tag="CD196_0341"
/note="metal ion-dependent adhesion site (MIDAS); other
site"
/db_xref="CDD:29222"
gene 395458..396210
/gene="cbiM"
/locus_tag="CD196_0343"
/db_xref="GeneID:8463472"
CDS 395458..396210
/gene="cbiM"
/locus_tag="CD196_0343"
/codon_start=1
/transl_table=11
/product="cobalt transport protein"
/protein_id="YP_003213391.1"
/db_xref="GI:260682106"
/db_xref="GeneID:8463472"
/translation="MKQNIKLGVIAALMLIVLTPVTSNAMHIMEGYLPVKWSIAWGVI
FIPFFLVGLKSIGKIVKQDPKKKVLLALCGAFVFVLSALKIPSVTGSCSHPTGVGLGA
IMFGPSVMFVLGTIVLIFQALLLAHGGITTLGANAFSMAIIGPIISFLIFKALKKKDG
NNAMPVFLAAAIGDLATYTVTSIQLALAFPDPSGGVMASAIKFLGIFFMTQIPIAIAE
GILTVIVYNLITENGEKSILENNDKGVKANEC"
misc_feature 395533..396150
/gene="cbiM"
/locus_tag="CD196_0343"
/note="cobalt transport protein CbiM; Validated; Region:
PRK08319"
/db_xref="CDD:181384"
misc_feature 395650..396144
/gene="cbiM"
/locus_tag="CD196_0343"
/note="Protein of unknown function (DUF3816); Region:
DUF3816; pfam12822"
/db_xref="CDD:205090"
gene 396200..396484
/gene="cbiN"
/locus_tag="CD196_0344"
/db_xref="GeneID:8465917"
CDS 396200..396484
/gene="cbiN"
/locus_tag="CD196_0344"
/codon_start=1
/transl_table=11
/product="cobalt transport protein"
/protein_id="YP_003213392.1"
/db_xref="GI:260682107"
/db_xref="GeneID:8465917"
/translation="MSAKTKTKTNILLLLLVVALIIFPLLVNSGAEYGGADGQAESEI
TKINPDYEPWFSSPYEPPSGEIESLLFSAQAALGAGVIGYILGVQKGKRS"
misc_feature <396281..396478
/gene="cbiN"
/locus_tag="CD196_0344"
/note="cobalt transport protein CbiN; Provisional; Region:
PRK02898"
/db_xref="CDD:179494"
gene 396487..397185
/gene="cbiQ"
/locus_tag="CD196_0345"
/db_xref="GeneID:8465918"
CDS 396487..397185
/gene="cbiQ"
/locus_tag="CD196_0345"
/codon_start=1
/transl_table=11
/product="cobalt transport protein"
/protein_id="YP_003213393.1"
/db_xref="GI:260682108"
/db_xref="GeneID:8465918"
/translation="MLIIDKYAYTNRLSKVNPNKKVAIGVIFLIASMVIKNIFVLSGI
MILMSILVVCVAGIDLKNYLKLLRIPMYFLFLSIGITLVNISFNKADLLYSFEIFSFN
VGISKASIDMSIHVLFRAMSCLTCVYFCILTTPFNQLIFFFKKMHLPDTFVELSMLIY
RFIFIFLEEFSEIYKSQELRFGYINLKTSYKSLGILGSMLYKRLMTRYDDMCISLDIK
LYDGKFHIVGDNDV"
misc_feature 396487..397164
/gene="cbiQ"
/locus_tag="CD196_0345"
/note="Cobalt transport protein; Region: CbiQ; cl00463"
/db_xref="CDD:186013"
gene 397178..397996
/gene="cbiO"
/locus_tag="CD196_0346"
/db_xref="GeneID:8465921"
CDS 397178..397996
/gene="cbiO"
/locus_tag="CD196_0346"
/codon_start=1
/transl_table=11
/product="cobalt ABC transporter ATP-binding protein"
/protein_id="YP_003213394.1"
/db_xref="GI:260682109"
/db_xref="GeneID:8465921"
/translation="MFKINNLTYQYEKNTNALLNINMDFSKGNVIGIIGSNGSGKSTL
FMNLMGILKPTSGEILFKEEKLKYDKRSLYNLRKNVGIVFQDPEKQIFYSKVYDDIAF
AMRNIGIDEKIIKERINKALVAVNGIDFIDRPVHFLSYGQKKRVAIASVIAMENEIIL
LDEPTAGLDPVSTRSIVDIIKGLNKDNIKIVISSHDMNLMYEICDYIYVLDKGILIDE
GKAENVFVNENNIIQAGLESPWLVKVHRNMNLPLFKKEEDLYKYWKERELNTNK"
misc_feature 397178..397981
/gene="cbiO"
/locus_tag="CD196_0346"
/note="cobalt transporter ATP-binding subunit;
Provisional; Region: cbiO; PRK13638"
/db_xref="CDD:184198"
misc_feature 397184..397816
/gene="cbiO"
/locus_tag="CD196_0346"
/note="First domain of the ATP-binding cassette component
of cobalt transport system; Region:
ABC_cobalt_CbiO_domain1; cd03225"
/db_xref="CDD:213192"
misc_feature 397280..397303
/gene="cbiO"
/locus_tag="CD196_0346"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213192"
misc_feature order(397289..397294,397298..397306,397430..397432,
397661..397666,397760..397762)
/gene="cbiO"
/locus_tag="CD196_0346"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213192"
misc_feature 397421..397432
/gene="cbiO"
/locus_tag="CD196_0346"
/note="Q-loop/lid; other site"
/db_xref="CDD:213192"
misc_feature 397589..397618
/gene="cbiO"
/locus_tag="CD196_0346"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213192"
misc_feature 397649..397666
/gene="cbiO"
/locus_tag="CD196_0346"
/note="Walker B; other site"
/db_xref="CDD:213192"
misc_feature 397673..397684
/gene="cbiO"
/locus_tag="CD196_0346"
/note="D-loop; other site"
/db_xref="CDD:213192"
misc_feature 397748..397768
/gene="cbiO"
/locus_tag="CD196_0346"
/note="H-loop/switch region; other site"
/db_xref="CDD:213192"
gene 398227..400515
/gene="pcrA"
/locus_tag="CD196_0347"
/db_xref="GeneID:8465919"
CDS 398227..400515
/gene="pcrA"
/locus_tag="CD196_0347"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase"
/protein_id="YP_003213395.1"
/db_xref="GI:260682110"
/db_xref="GeneID:8465919"
/translation="MAVNRRRNMNLDTLNPAQREAVEKTEGPVLILAGAGSGKTKVLT
TRIAYLIEDKGVQAPNILAITFTNKAANEMRERVEQNIGPETKDMWISTFHSCCVRIL
RKDINKIGYNRSFVIYDSADQVTLVKDCLKELNLSDKVFEPKAVISAISGAKDKLYTP
KQFKDINMADNRMVKIADIYALYQDRLKRNSALDFDDLILKTVELFKANDEVLAYYRS
RFRYIMVDEYQDTSKAQYELIKLLAREHQNICVVGDDDQSIYGWRGADIRNILEFEKD
YDNVHVVKLEQNYRSTQVILDAANKVISNNIERKRKKLWSEKKEGELIKIQLTGSEIE
EADFIADSIAQIARKENRPYKDFAVLYRANAQARPVEDALNRSQIPYNIYGGTKFYER
KEIKDLLAYLRVIQNPQDDISIKRIINVPRRGIGLRTIEKIEDRANLKQESIYSVLID
IETNSDISTKARASISGFVDIIGTLRTIKEVYPVSKLIEKVLDTTGYMDELVEIRNKN
EKDLTGKGEEAQDRIDNLREFISIALEFESSNDDTYENKDLETFLTSIALTSESNDEE
DNDRVSLMTIHTSKGLEFPVVFLTGMEEGLFPISRAIKSMSDSQIEEERRLCYVGITR
AKEELYMSLTEKRTLYGKTNVAIASRFMEELPEECIERLYKVKKELSYSKASYNMLDK
YTKKYMSTISKSKVADKVNATIKDSNKETNPDDIKLGSKVHHPKFGVGTVVSIIGTDV
TIAFDQQGIKKINKEYTTLNIL"
misc_feature 398257..400482
/gene="pcrA"
/locus_tag="CD196_0347"
/note="ATP-dependent DNA helicase PcrA; Region: pcrA;
TIGR01073"
/db_xref="CDD:162191"
misc_feature 398284..398514
/gene="pcrA"
/locus_tag="CD196_0347"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:205425"
misc_feature <399946..400119
/gene="pcrA"
/locus_tag="CD196_0347"
/note="Family description; Region: UvrD_C_2; pfam13538"
/db_xref="CDD:205716"
gene 400532..401830
/locus_tag="CD196_0348"
/db_xref="GeneID:8466409"
CDS 400532..401830
/locus_tag="CD196_0348"
/note="catalyzes the removal of amino acids from the N
termini of peptides"
/codon_start=1
/transl_table=11
/product="aminopeptidase 2"
/protein_id="YP_003213396.1"
/db_xref="GI:260682111"
/db_xref="GeneID:8466409"
/translation="MDSINFAKNLIDFIYDSPSSFHAVESTKEILDKNGFEELVLNQR
WNLRVGGKYYVTKNLSAIVAFVVNSEDIERDGFRIIGSHSDSPTFSIKPNAEIEAEKS
YLKLNTECYGGAILSTWLDRPLGIAGRVVLKGDSILKPNERLIDFKKPICIIPNLAIH
LNRSINDGHSYNKQKDMLPLVGMLNDTLEKDNFLIKQIASNLDVNMEDIIDFDLFLYE
FEKGSLIGANDEFISIGRQDNLAMVHASLNALVNTKGQQGVNVMAVFDNEEVGSSTKQ
GADSNMLLNILERICISMGKDREGFFESIYSSFMISSDLAHAIHPNIPEKHDPTNKPI
MGKGPVIKINASQAYTSDGYSIAIYKNICREVNVEYQEFVNRSDERGGSTIGPISSTH
IDIPSVDVGSPILAMHSIRELGNVEDHYSIYKTFSKFFEI"
misc_feature 400550..401824
/locus_tag="CD196_0348"
/note="M18 Peptidase Aspartyl aminopeptidase; Region:
M18_DAP; cd05658"
/db_xref="CDD:193534"
misc_feature 400568..401821
/locus_tag="CD196_0348"
/note="Aminopeptidase I zinc metalloprotease (M18);
Region: Peptidase_M18; pfam02127"
/db_xref="CDD:202119"
misc_feature order(400778..400780,401243..401248,401333..401338,
401471..401476,401480..401482,401555..401557,
401576..401578,401675..401680,401750..401755)
/locus_tag="CD196_0348"
/note="active site"
/db_xref="CDD:193534"
misc_feature order(400778..400780,401243..401245,401333..401338,
401471..401473,401753..401755)
/locus_tag="CD196_0348"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193534"
gene 401861..402613
/locus_tag="CD196_0349"
/db_xref="GeneID:8463473"
CDS 401861..402613
/locus_tag="CD196_0349"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213397.1"
/db_xref="GI:260682112"
/db_xref="GeneID:8463473"
/translation="MKLGLCLEGGGAKGAYQAGVVKALYDGGINKFYSISGTSIGAIN
GYYLYTGNVDNLEKMWTNIKDIQNGNVKIVNNTVDNSPAIDNLRELDDSNIEEMNFYV
NYVEVDNKVVSEKIVDISKMPRNEAIISISYSGLLPSNPNATLGFKEQFVKDVQEGIY
DGFKLDGGLIRSALIEPLIGDNVDKIILISTKYNYELPEDIKKVYDEDKIIVVRPNTQ
FAPKDTLNFDDEFCKTIYQEGYEIGKNILDRL"
misc_feature 401873..402583
/locus_tag="CD196_0349"
/note="Hypothetical patatin similar to Z1214 protein of
Escherichia coli; Region: Pat_hypo_Ecoli_Z1214_like;
cd07209"
/db_xref="CDD:132848"
misc_feature order(401888..401893,401897..401899,401975..401977,
402356..402358)
/locus_tag="CD196_0349"
/note="active site"
/db_xref="CDD:132848"
misc_feature 401969..401983
/locus_tag="CD196_0349"
/note="nucleophile elbow; other site"
/db_xref="CDD:132848"
gene 402678..403202
/gene="ppiB"
/locus_tag="CD196_0350"
/db_xref="GeneID:8463474"
CDS 402678..403202
/gene="ppiB"
/locus_tag="CD196_0350"
/codon_start=1
/transl_table=11
/product="peptidyl-prolyl cis-trans isomerase"
/protein_id="YP_003213398.1"
/db_xref="GI:260682113"
/db_xref="GeneID:8463474"
/translation="MENKNPIVTIEMENGKEIKIELYPNIAPNTVKNFVSLVNEGYYN
GIIFHRVIPGFMIQGGCPNGTGMGGPGHSIKGEFSGNGFTNNLKHERGVISMARTMAP
NSAGSQFFIMHKNSPHLDGQYAGFGRVIEGMDTVDEIASVRTDSADKPQTPQIMKSVT
VETFGIDYSDVEKN"
misc_feature 402702..403166
/gene="ppiB"
/locus_tag="CD196_0350"
/note="cyclophilin: cyclophilin-type peptidylprolyl cis-
trans isomerases. This family contains eukaryotic,
bacterial and archeal proteins which exhibit a
peptidylprolyl cis- trans isomerases activity (PPIase,
Rotamase) and in addition bind the...; Region:
cyclophilin; cd00317"
/db_xref="CDD:29390"
misc_feature 402717..403160
/gene="ppiB"
/locus_tag="CD196_0350"
/note="peptidyl-prolyl cis-trans isomerase B (rotamase B);
Provisional; Region: PRK10791"
/db_xref="CDD:182734"
misc_feature order(402825..402827,402831..402833,402840..402845,
402849..402851,402966..402971,402999..403001,
403005..403007,403029..403034,403044..403046)
/gene="ppiB"
/locus_tag="CD196_0350"
/note="active site"
/db_xref="CDD:29390"
gene 404027..404977
/locus_tag="CD196_0351"
/pseudo
/db_xref="GeneID:8466452"
gene complement(405215..406813)
/gene="ppaC"
/locus_tag="CD196_0352"
/db_xref="GeneID:8463475"
CDS complement(405215..406813)
/gene="ppaC"
/locus_tag="CD196_0352"
/note="catalyzes the hydrolysis of pyrophosphate to
phosphate"
/codon_start=1
/transl_table=11
/product="manganese-dependent inorganic pyrophosphatase"
/protein_id="YP_003213399.1"
/db_xref="GI:260682114"
/db_xref="GeneID:8463475"
/translation="MSLLVFGHKNPDTDSICSAISLAHLKNKLGIKATAYALGDIRKE
AKYALDYFKVDAPEILDNVRIQVRDLNYDKVVPLTPTSSILEAYNLMDEKNVKTLPVT
YDDGTFAGIITMKEIAKNLLHQHFTTIHTSLSNICKNLNGTILVDCGEDIKGRVVTLS
FGMETLIETLKEGDIAIVGDRYDSIEYAIDTKVKLLILTNHTEISKDLLALAKINGVS
VVSVESDNYKTSNVINQCSFLDSIEATENLITFKEDDYMDEIKEIMLETNFRSYPILD
DDNKFLGLVSKGHLLNPSKKNVVLVDHNEYAQSADGIEQANIVEIIDHHKLGGISTDV
PMSFRVMPVGCNSTIIYQMYKENNVEIPYEIAGLLLSAILSDTLLFKSPTTTDMDKKA
CEELSKIAKVDMEKYAMDMFKCGTSLDEYTIEEIVNMDFKEFNMSGHRVGIGQVFTLD
IDSIFAKKDEFLSYINSTDYDKLILAVTDIIKEGSYLIYKAEDSLIANAFDVEGVQGT
FAPGVVSRKKQLVPNLTTAIKNFK"
misc_feature complement(405224..406813)
/gene="ppaC"
/locus_tag="CD196_0352"
/note="putative manganese-dependent inorganic
pyrophosphatase; Provisional; Region: PRK14869"
/db_xref="CDD:184871"
misc_feature complement(406454..406789)
/gene="ppaC"
/locus_tag="CD196_0352"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains associated
with a DRTGG domain upstream. The function of the DRTGG
domain, named after its conserved residues, is unknown.
CBS is a small domain originally...; Region:
CBS_pair_DRTGG_assoc2; cd04597"
/db_xref="CDD:73097"
misc_feature complement(406106..406411)
/gene="ppaC"
/locus_tag="CD196_0352"
/note="DRTGG domain; Region: DRTGG; pfam07085"
/db_xref="CDD:203577"
misc_feature complement(405938..406084)
/gene="ppaC"
/locus_tag="CD196_0352"
/note="CBS domain; Region: CBS; pfam00571"
/db_xref="CDD:201313"
misc_feature complement(405230..405592)
/gene="ppaC"
/locus_tag="CD196_0352"
/note="DHHA2 domain; Region: DHHA2; pfam02833"
/db_xref="CDD:202421"
gene 407661..410333
/gene="adhE"
/locus_tag="CD196_0353"
/db_xref="GeneID:8466450"
CDS 407661..410333
/gene="adhE"
/locus_tag="CD196_0353"
/codon_start=1
/transl_table=11
/product="bifunctional acetaldehyde-CoA/alcohol
dehydrogenase"
/protein_id="YP_003213400.1"
/db_xref="GI:260682115"
/db_xref="GeneID:8466450"
/translation="MHNYFREVFSMEKKEKVVEKSNVEVCSPEIVNSVETLRMRLEEI
RLAQKEFATFTQEQVDKIFLAASTAANQQRIPLAKMAVEETGMGIVEDKVIKNHFASE
YIYNAYKDTKTCGVIEKDEAFGFTRIAEPVGVLSAVIPTTNPTSTAIFKSLIALKTRN
GIIFSPHPRAKNCTIEAARVVHDAAVKAGAPKGLIGWVDVPSIELTNVVMAEADLILA
TGGPGMVKSAYSSGKPAVGVGPGNVPAIIDESADIKMAVSSILVSKSFDNGMICASEQ
AVIVPEKIYEEVKKEFKYRGAHFLNKEETEKVGKVVIIDGSLNARIVGQPAHVIAKMA
DVEVPKTARIIIGEVESVELNEPFAHEKLSPVLAMYKSKSFEDAVAKAEKLVADGGYG
HTSSLYADSINHPDRVEKFVNAMKTCRVLVNTPSSQGGIGDLYNFKLAPSLTLGCGSW
GGNSVSENVGVKHLLNIKTVAERRENMLWFRAPEKVYFKKGCLGVAAREFKDVMDKKK
AFIVTDSFLYNNGYTKKLTDLLDEMGIKHTTFFDVAPDPTLACAREGAKAMADFQPDL
IIAVGGGSAMDAGKIMWVMYEHPEVDFQDLAMRFMDIRKRVYVFPKMGEKAYFAAIPT
SAGTGSEVTPFAVITDQDSGVKYPLADYELMPNMAIIDADMMMEMPPRLTAASGVDAL
THALEAYVSMLRTEPADGLALQAGKIIFEYLPRAYKNGKNDKEAREKMAMASTMAGMS
FANAFLGICHSLAHKLGAFHHVQHGVANALLINEVIKFNCAEAPNKMGAFSQYRYPDC
IQRYAEFASFAGIKGNTDQEKVDNLIKAIDELKARVGLPKTIKEAGVEESKFLETLDV
MVEQAFDDQCTGANPRYPLMSELKEIYLKVYYGK"
misc_feature 407742..410321
/gene="adhE"
/locus_tag="CD196_0353"
/note="bifunctional acetaldehyde-CoA/alcohol
dehydrogenase; Provisional; Region: PRK13805"
/db_xref="CDD:184338"
misc_feature 407781..409079
/gene="adhE"
/locus_tag="CD196_0353"
/note="Coenzyme A acylating aldehyde dehydrogenase (ACDH),
ALDH family 20-like; Region: ALDH_F20_ACDH; cd07122"
/db_xref="CDD:143440"
misc_feature 408474..408476
/gene="adhE"
/locus_tag="CD196_0353"
/note="putative catalytic cysteine [active]"
/db_xref="CDD:143440"
misc_feature 409107..410312
/gene="adhE"
/locus_tag="CD196_0353"
/note="C-terminal alcohol dehydrogenase domain of the
acetaldehyde dehydrogenase-alcohol dehydrogenase
bifunctional two-domain protein (AAD); Region: AAD_C;
cd08178"
/db_xref="CDD:173937"
misc_feature order(409200..409202,409374..409382,409389..409391,
409398..409400,409530..409535,409539..409541,
409596..409601,409653..409655,409677..409679,
409698..409700,409710..409712,409908..409910,
409920..409922,409950..409952)
/gene="adhE"
/locus_tag="CD196_0353"
/note="putative active site [active]"
/db_xref="CDD:173937"
misc_feature order(409698..409700,409710..409712,409908..409910,
409950..409952)
/gene="adhE"
/locus_tag="CD196_0353"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:173937"
gene complement(410693..411034)
/locus_tag="CD196_0354"
/db_xref="GeneID:8465824"
CDS complement(410693..411034)
/locus_tag="CD196_0354"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213401.1"
/db_xref="GI:260682116"
/db_xref="GeneID:8465824"
/translation="MLLILDNLNLNLDFDYRIIREENDDVDIFIDINYRSLDIDTDGS
NLFNSRIQFPFVRALILRINKNNQCMTIHLLRDIDLFSAFANFEVDYTDSIINIKNQN
EKVILNKSIKK"
gene complement(411061..411732)
/locus_tag="CD196_0355"
/db_xref="GeneID:8463476"
CDS complement(411061..411732)
/locus_tag="CD196_0355"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_003213402.1"
/db_xref="GI:260682117"
/db_xref="GeneID:8463476"
/translation="MPILEILNLGKIYGKKETAVHALKDANLKINKGEFVAIIGPSGS
GKSTFLHLVGGLERPSSGTIKVDGKDICCLSDKKLAKYRRQKVGFVFQQYNLIPVLNV
KENIELPLKLDNKKVDEEYIEDIINLLGLSERKNHLPNQLSGGQQQRVAIARALSAKP
SIILADEPTGNLDSKTTEEVMDLLKSSIKKYNQTLIIITHNENIARKADRIISIIDGE
LKLTL"
misc_feature complement(411076..411726)
/locus_tag="CD196_0355"
/note="ABC-type antimicrobial peptide transport system,
ATPase component [Defense mechanisms]; Region: SalX;
COG1136"
/db_xref="CDD:31331"
misc_feature complement(411076..411723)
/locus_tag="CD196_0355"
/note="ATP-binding cassette domain of the transporters
involved in export of lipoprotein and macrolide, and cell
division protein; Region: ABC_MJ0796_LolCDE_FtsE; cd03255"
/db_xref="CDD:213222"
misc_feature complement(411592..411615)
/locus_tag="CD196_0355"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213222"
misc_feature complement(order(411133..411135,411232..411237,
411457..411459,411589..411597,411601..411606))
/locus_tag="CD196_0355"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213222"
misc_feature complement(411457..411468)
/locus_tag="CD196_0355"
/note="Q-loop/lid; other site"
/db_xref="CDD:213222"
misc_feature complement(411280..411309)
/locus_tag="CD196_0355"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213222"
misc_feature complement(411232..411249)
/locus_tag="CD196_0355"
/note="Walker B; other site"
/db_xref="CDD:213222"
misc_feature complement(411214..411225)
/locus_tag="CD196_0355"
/note="D-loop; other site"
/db_xref="CDD:213222"
misc_feature complement(411127..411147)
/locus_tag="CD196_0355"
/note="H-loop/switch region; other site"
/db_xref="CDD:213222"
gene complement(411744..414329)
/locus_tag="CD196_0356"
/db_xref="GeneID:8463477"
CDS complement(411744..414329)
/locus_tag="CD196_0356"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_003213403.1"
/db_xref="GI:260682118"
/db_xref="GeneID:8463477"
/translation="MKDNLKIALRYIISYKARSLAIALSIILATSLIVGIGTLSRSAQ
QAEVDKLKRETGSDHVYFKDINKNQLEYIKSRKDIKNLGITSHYGYTDPNERLAINLE
YANKNYLTNQSKLIKGHLPKASNEVVVEKWILNSLGLKPEINQNITFKLYQKEKPETF
KVVGILEDRPIEKNKGTCEIFLNLNESKLDKFSYAYIEFNNGIDINTSIDNIVKNTML
DENSVGKNKMLIESTRENGTLDNSSKYTAITMSLFSGIVIYSIYVISIYQRIQEYGIL
RAIGSTNFKIFKFMFYELFILALIAIPIGICTGIGGAQIFNRTAGNIQFEGNVTVTPF
VIPDKIILLSIGSIILTILIISFFTYLKIRRISPIDSIRKTFGTDKNINKVNSLISKL
TLNISVTKSISAKNIFRNKKGFIIIILSMSLGGIMIIKENYKYSFSDIQNKNGQEETY
MNADFILTNFFLKLNQSNKADSFKDIKGLNDNQIDKIKNINGIDKVKTASILDTRIEV
DKLNGLDYYNIINSTPYYKDFPLFIKNKNTGKYTMKQKLRGYNDEMINSLEKYLVSGS
INLERMKKENLAILYVPQVSKTNKYKLSYTPGTETPAVDIKVGDTIKVKYPKGEIDQD
LYIKLKDNYEYLEYEFKVGAIVSYPFADNYLYSGDQGIDVITSNDYLKKLTGVDKYNV
VYVDINKNANVKKINTLLGEIGSESPGTTTANMLMEKENFDKMTARALTYAYGIVAVM
FIISVFNIINNISYNLTSRTSEFGMLRAIGISERGFKNMILYEGILYGILSSVITIVV
GLIIQFRMYYTYNFVSYGLGFSIDYKIYILVVLANIIVGILATYIPLRKINKISIVEA
INITE"
misc_feature complement(413688..414308)
/locus_tag="CD196_0356"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:205030"
misc_feature complement(<413322..413528)
/locus_tag="CD196_0356"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
misc_feature complement(411771..412064)
/locus_tag="CD196_0356"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
gene 414537..415472
/locus_tag="CD196_0357"
/db_xref="GeneID:8463478"
CDS 414537..415472
/locus_tag="CD196_0357"
/codon_start=1
/transl_table=11
/product="two-component sensor histidine kinase"
/protein_id="YP_003213404.1"
/db_xref="GI:260682119"
/db_xref="GeneID:8463478"
/translation="MENNFIFPIVILTLFIFSNLIMNKYRFYKELDILKRGILTFFVS
CFVWILFMEGIEYIQLSLGYNFLLEGVLNIILFLILIILSFYIGFKFIRLLDNNNKQE
YKLQKLDSKINHKDNIIVKLRSQKHDYLKHLQVVYSLLNTGLAEDAKEYITNISNSFK
SKNSRYGKVSYLDAIASLKYEECLEKNISFDVYIQDFMDNLEIEPNDMSSVLLNIIDN
AIESLSAIQKEKKYIRLHAYEDEFQYIIAIKNNGPKIHNVESIFLDGFSTKEGQDRGF
GLYLVKNILDKYDYSILVNSDDFLTEFVILIPKYY"
misc_feature 415164..415457
/locus_tag="CD196_0357"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(415176..415178,415188..415190,415197..415199,
415278..415280,415284..415286,415290..415292,
415359..415370,415416..415418,415422..415424,
415437..415439,415443..415445)
/locus_tag="CD196_0357"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 415188..415190
/locus_tag="CD196_0357"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(415290..415292,415359..415361,415365..415367)
/locus_tag="CD196_0357"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 415491..416228
/locus_tag="CD196_0358"
/db_xref="GeneID:8463479"
CDS 415491..416228
/locus_tag="CD196_0358"
/codon_start=1
/transl_table=11
/product="two-component response regulator"
/protein_id="YP_003213405.1"
/db_xref="GI:260682120"
/db_xref="GeneID:8463479"
/translation="MIKVLICDDDKIVRDDIANIVKESGYVDYVKKVKDGIEAIEFIK
SEKIDLLIIDIDMPYKNGIDSAKEILSIDKDIHIVFVTGFADYSLESFKVHPIDFIVK
PFKKEKILDSINIAIDHINSHKIAKNNFIEDTLFVYKIRKQIHMINFDDIVMFEKNSR
AINLYTRDEDTIKFYENFDDLKKRLPPNFFMTHRQYIVNLRLIHKVIPINKSSLEIKF
INFQESATLNKSLEKDFLYRFYRVKRF"
misc_feature 415491..416159
/locus_tag="CD196_0358"
/note="Response regulator of the LytR/AlgR family
[Transcription / Signal transduction mechanisms]; Region:
LytT; COG3279"
/db_xref="CDD:33090"
misc_feature 415503..415841
/locus_tag="CD196_0358"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(415512..415517,415650..415652,415674..415676,
415734..415736,415785..415787,415794..415799)
/locus_tag="CD196_0358"
/note="active site"
/db_xref="CDD:29071"
misc_feature 415650..415652
/locus_tag="CD196_0358"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(415659..415664,415668..415676)
/locus_tag="CD196_0358"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 415794..415802
/locus_tag="CD196_0358"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 415914..>416150
/locus_tag="CD196_0358"
/note="LytTr DNA-binding domain; Region: LytTR; pfam04397"
/db_xref="CDD:146835"
gene complement(416388..421445)
/locus_tag="CD196_0359"
/db_xref="GeneID:8463480"
CDS complement(416388..421445)
/locus_tag="CD196_0359"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213406.1"
/db_xref="GI:260682121"
/db_xref="GeneID:8463480"
/translation="MLERTRVEKNPKIIENFKNNFTKSSSKQYYDLAKSLWDCIENSS
YYYREPEDKFLNMIKKYYNCHYYEIKNMDELLSGPLKNALELIFTSEQVEELCQLIKR
KMDYTYSGGYYRKGYRSNKLVDYFRGIIRFISNYVDLIYYDFSVIDYLTLPNKVLYYD
SIMSDKIALEIDKGNQKVTSALEEVIFGENQTALLTRQMIIGIMKSHSDKCYEMLSKL
LLAAKQQEGLRQQIVESLDEGTISASIYMLKTILDNNLERFSSVIRALDTWTGLGFSD
QKPGIIRKCLELSYKSLTDEKFRIESINSNDNLEIYFALWATATYNIYDSYSLIENLL
SCQEKYKKLVALYFLSHTESTYFKHSIASKNIKGDDLEILAWVITNFYVEGSVGYYYS
WQNRETNFDLSNTPIDKDFDARKEQFESLKHTLEILNSKTKSFSGSVFPWTWIEISSH
EILKCMMTLTAYDMNAQFIDVLMENCHLMSSDLRASLIVNFVNEPKTDRQREFLLECL
SDKSVSNRETVLSLLRKLELTDVELDKITNLLSLKTSSIRQTVIKILLEQDDSNLENI
ASSLIKSSNSQKCLGGLEIVNLLKDNSDRQELYNKLILLIEDIDKSKKNTSQVQILID
NLLGKAKNDYCKENGFGIYNPENKVQIPEQFDFKDDSNSSSKLNKIISNISLSTSEDS
VSVATKKEAKKILDTDINKIIKVYEKFDELITENADYEYEVERWSGNVDKVLLGYSTY
NLTPIKYKVSNDTLDNYPLAELWRETSKKLDLDYKLILDILFYSISTCGYNETEKSWF
SSIYSNVLDSKKQNKIYTKLEKFKFNGLTRKLLRVLLNEFDHKEIFNYCLEIYYKLRN
LLTIEQCKKQRVEFTKNYYRQNEYCPALNAPILNYWLDKAHSFIYDDISFTKFFYTTF
SNYQLLEYKFPFYTSINVFARAHELGLMTEEQVNREMISGYNASNIIRTLTNPRWAGD
TLEKYPWLKDNLKTVTNRIIEIESRRGDMPTEVSHLANNIQYFEGIDYFVNILVALGK
ETFQRGYSYGSNYSKKDVLSSLLKNCYPTKEDDSKKLKSLLKNTDITELRLIESAMYA
PQWVNIIEKYLNWKGLKSTIWYFHAHINEGFSAQKESEVALFSPISPRSFIDGAFDVD
WFLDSYKTIGEERFNILYKSAKYITSGGNSHRRAQLYADATLGKLDKDMLMKEIETNR
NQDKLRSFSLLPMKKGDLKEATFRYEFIQKFAKESKQFGAQRRESESKACTIALENLA
RSAGFGDVNRMMWALETEKLNEVAHLFKPKDIDGTSIWIDVDESGKASTKVQKGNKSL
KSIPKAIAKHPYVLELKSVQKDLKSQYSRAKQSLEQAMKNEIVFTVKEIANIYKNPVI
CPLIKNLVWVCDDNIGYVYNDKSKFFICNIEGETYKLTAKNKLKLAHPVHLFESGKWS
EFQHDLFSKQLVQPFKQVFREYYRINSDEISEKTISRRYAGHQIQPKKTVALLRNQLW
TVDYEEGLQKVFYKENIVAKMFALADWFSPADIEPPTIETVEFFDRKTYKSLELASIP
PILFSEVMRDIDLVVSVAHAGGVDPETSHSTVEMRIAIAKELLLLLKINNINFEGSHV
LITGNLGEYSVHMGSGIVHKKGMGALNILPVHSQSRGKIFLPFADEDPKTAEIMSKIL
LLAEDNKIKDPSILSNL"
misc_feature complement(416961..417494)
/locus_tag="CD196_0359"
/note="Domain of unknown function (DUF4132); Region:
DUF4132; pfam13569"
/db_xref="CDD:205747"
gene complement(421470..421889)
/locus_tag="CD196_0360"
/db_xref="GeneID:8463481"
CDS complement(421470..421889)
/locus_tag="CD196_0360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213407.1"
/db_xref="GI:260682122"
/db_xref="GeneID:8463481"
/translation="MQIYFRVKAVGKRKPMLELTPFDVSDNINCLKEAISEIVSKNVL
EYNEKIPEKSIINFLTNEEIESQADIGKVGFGSIYNENKQSVEKAIEVALQAFEDGIY
KVLINEDVIEKLDSPINLKSGDIFTFIRLTLLAGRMF"
gene complement(422122..422373)
/locus_tag="CD196_0361"
/db_xref="GeneID:8463482"
CDS complement(422122..422373)
/locus_tag="CD196_0361"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213408.1"
/db_xref="GI:260682123"
/db_xref="GeneID:8463482"
/translation="MNRYTKIINMMGSYYTKDFEKEKKNVIKVREVKEDTVRKFFLQG
DCEVLVVFEDTGKEILIDDFSPEEDIKKYLGTKFINKKR"
gene 422462..423193
/locus_tag="CD196_0362"
/db_xref="GeneID:8463483"
CDS 422462..423193
/locus_tag="CD196_0362"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213409.1"
/db_xref="GI:260682124"
/db_xref="GeneID:8463483"
/translation="MTSIKNKDILNCIDYSIKNKLFDKLNDVYKSLPVGNCSGCGNCC
MESVGINLIEFLNIFCYLEDRVDLKKSCISKILDYYFEEYTRKNPCPFKDTNNRCLIY
EVRPLNCRMFGHWKKEDYNKNLDNVIEKNNNYRELMKKQYGFEINDEVVNYRIDYCDR
FIPNKDYLSKSKRLSFFDELMILDSNIYSSGNIDIDFRDRGIVEYFIESLLYRNLAYN
VKIRISKEYKIRKRTIDRIKRIVLV"
misc_feature 422570..422830
/locus_tag="CD196_0362"
/note="Flagellin N-methylase; Region: FliB; pfam03692"
/db_xref="CDD:112504"
gene 423180..424163
/locus_tag="CD196_0363"
/db_xref="GeneID:8463484"
CDS 423180..424163
/locus_tag="CD196_0363"
/codon_start=1
/transl_table=11
/product="metallo-beta-lactamase"
/protein_id="YP_003213410.1"
/db_xref="GI:260682125"
/db_xref="GeneID:8463484"
/translation="MFLYSFILVSNKLYHKYCQNEVRKVNLTKVKGNTFFIKGGTNTG
IYVFEDNTALMIDPGLCGSRPRRVNKVLDENNIQVRYIINTHGHDDHYGACNQFKEYY
KDVCIMSSEYDKLYIENPELFSKYIVGGKSNVFMDNILKNKMLDDIKIDKSIEVGKIE
LNNEMFDIIEFQGHTPGSIAVLTKDNVIFVGDLLIGDEILSKYDFLFLYDIQEQINSL
EKLKNIDFEYLVLGHGKQVISKEDSYKLIEKHLNALKKYLYQIRELLVEPKSLEILLK
NIINNNNLSNNYKEYHFFKSSLVSVISYLVDLEEIGYILENGELLYYTKTK"
misc_feature 423285..423983
/locus_tag="CD196_0363"
/note="Zn-dependent hydrolases, including glyoxylases
[General function prediction only]; Region: GloB; COG0491"
/db_xref="CDD:30837"
misc_feature 423312..423878
/locus_tag="CD196_0363"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; smart00849"
/db_xref="CDD:197917"
gene 424214..425026
/locus_tag="CD196_0364"
/db_xref="GeneID:8463485"
CDS 424214..425026
/locus_tag="CD196_0364"
/codon_start=1
/transl_table=11
/product="guanosine 3',5'-bis-pyrophosphate (ppGpp)
synthesis/degradation protein"
/protein_id="YP_003213411.1"
/db_xref="GI:260682126"
/db_xref="GeneID:8463485"
/translation="MEYEKWNEILAPYEHAVEELKIKFKNIRKEYLAKGEYSPIEFVT
GRTKKISSIISKLKRINAKDIETEIDDIAGIRIMCQFVEDIYAIVDLIKVRNDMTIIG
EKDYITNYKDSGYRSYHVIIKYPINSIAGSKEIICEIQIRTLAMNFWATIEHSLKYKY
DHYIPETLAERLRRASDAAFLLDQEMSEIREDIMKAQAMYQMKSIAIRDTLNRIQELY
DLGDTHKAMQYQRKLDRTETDKNITEILELKQEIDILLEQYKDTKVDDKVVQ"
misc_feature 424316..424669
/locus_tag="CD196_0364"
/note="Nucleotidyltransferase (NT) domain of RelA- and
SpoT-like ppGpp synthetases and hydrolases; Region:
NT_Rel-Spo_like; cd05399"
/db_xref="CDD:143389"
misc_feature order(424349..424351,424355..424357,424424..424429,
424439..424441,424523..424525,424529..424531,
424544..424546,424550..424552,424556..424558,
424568..424570,424625..424627,424631..424633,
424637..424639,424661..424666)
/locus_tag="CD196_0364"
/note="synthetase active site [active]"
/db_xref="CDD:143389"
misc_feature order(424349..424351,424523..424525,424529..424531,
424544..424546,424550..424552,424556..424558,
424568..424570,424625..424627,424631..424633,
424661..424663)
/locus_tag="CD196_0364"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143389"
misc_feature order(424424..424426,424625..424627)
/locus_tag="CD196_0364"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143389"
gene 425136..425828
/locus_tag="CD196_0365"
/db_xref="GeneID:8463486"
CDS 425136..425828
/locus_tag="CD196_0365"
/codon_start=1
/transl_table=11
/product="phosphoesterase"
/protein_id="YP_003213412.1"
/db_xref="GI:260682127"
/db_xref="GeneID:8463486"
/translation="MSLYAIGDLHFSTSVNKPMNIFGSNWDGHEKKIIDNWKEVVKEE
DMVLVLGDTSWGINLSEAKKDLDIISKLPGQKILIKGNHDYWWTTVTSLNKLYEDMRF
IQTNFYEYKDYAICGGRGWICPNDVKFDETDEKVYKREEHRLRLSLESARKSGHSKII
VITHYPPTNDKLEESLFTKLFEEYNVEKVIYGHLHGKESFKMGLKGIRNGVEYTLASC
DYTEFNLIKVHD"
misc_feature 425142..425807
/locus_tag="CD196_0365"
/note="metallophosphatase superfamily, metallophosphatase
domain; Region: MPP_superfamily; cl13995"
/db_xref="CDD:214216"
misc_feature 425142..425720
/locus_tag="CD196_0365"
/note="Calcineurin-like phosphoesterase; Region:
Metallophos; pfam00149"
/db_xref="CDD:201036"
misc_feature order(425157..425159,425163..425165,425289..425291,
425379..425384,425625..425627,425712..425714)
/locus_tag="CD196_0365"
/note="active site"
/db_xref="CDD:163614"
misc_feature order(425157..425159,425163..425165,425289..425291,
425379..425381,425625..425627,425712..425714)
/locus_tag="CD196_0365"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163614"
gene 425915..426856
/locus_tag="CD196_0366"
/db_xref="GeneID:8463487"
CDS 425915..426856
/locus_tag="CD196_0366"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213413.1"
/db_xref="GI:260682128"
/db_xref="GeneID:8463487"
/translation="MRWILVFIFLYLIPLVVIFRNYKNFKRSCIYSSIYVVLATTIMI
SNIYMSGLNKIKESMYYHNYISDETYDEKYVSNFKEKESTDLKQDNKKNEEISNNKNL
NNKQDRNIQNKESNEEGSNDIKEKNNSDSNVSVNNKSEKQEDNTKENNKYTSKEKNSE
DIKKIDMESIGIFKKEIYNIERAALVPMRECIPYTKDIAKNITKLSSIKKDVTNARNK
CKEVVKEYENMQIPELSKEKYTETLSNARDDVKKAYELREKSMESALKLINTKSPKYI
GKITEYLDLSDKQIESFKNRLNDLKEEINNSETNNIN"
gene 426890..428050
/locus_tag="CD196_0367"
/db_xref="GeneID:8463488"
CDS 426890..428050
/locus_tag="CD196_0367"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213414.1"
/db_xref="GI:260682129"
/db_xref="GeneID:8463488"
/translation="MMNKQSIGKLNMFFMGITQRNLDNRHFFIELEVIFKSGRKEFKG
IAIEEDNKYKFNFKGKSDLYTFNELLKNISKEAENYDGLVFKYVERGTIVVIEGDNKK
VNVKYLDNKEEVPKIDEFTASQIKNRDYYVKVGQANALLKEIGVLTKDGKIKNDKIRK
YNQIDHFVELIDSILKEIKDKDCITILDCACGKSYLSFVLNFYIKEVLKKNCYFIGID
YSDVVIEASKNMAKNLGYKNMSFIKEDLTNYTPNRDVDLVISLHACDTATDMAIGLGI
RAKSEAIVVVPCCHKELLGQYRYEAMEPILKHGVFKARFADLITDGLRTLLLEGNGYD
TSVVEYISPLDTPKNLMIRAIKTKTNNDKALKEYKELKSQFGVEPTLEKLIY"
misc_feature 427439..427783
/locus_tag="CD196_0367"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:206018"
misc_feature 427442..>427684
/locus_tag="CD196_0367"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(427454..427474,427541..427546,427619..427627,
427670..427672)
/locus_tag="CD196_0367"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 428190..428762
/locus_tag="CD196_0368"
/db_xref="GeneID:8463489"
CDS 428190..428762
/locus_tag="CD196_0368"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213415.1"
/db_xref="GI:260682130"
/db_xref="GeneID:8463489"
/translation="MEVKMNKLNICIDIDGTITSPYHFLPYLNDIFNKNITEAECITH
NWEELYGSGIRDVYAEFNNKYIHSYDEAKIVEGATEVISTLSKGHNLSFVTARHECLT
DVTKNWLSRQGFSDIDVYLLGSDYKVEKARELSCDIFIEDNPLNSVQLADDGVKVILL
DTNYNKDVKHQNIVRVSNWIDIEKIIKQGI"
misc_feature 428202..428753
/locus_tag="CD196_0368"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:214172"
gene 428790..429281
/locus_tag="CD196_0369"
/db_xref="GeneID:8463490"
CDS 428790..429281
/locus_tag="CD196_0369"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213416.1"
/db_xref="GI:260682131"
/db_xref="GeneID:8463490"
/translation="MIDLKIENRKGKIHVKSSEIKDILELRPDFEYVQDISNTINQEN
ILVFDCQLTGNSFDMDDLDIEEILEELGEEIDESYFSVLFEDVRAYLKDATDEIEADL
QDNYLFDNLRCYFDIYNINQEFTDFKFVFLVSFKDIKISSLANLAKIVSKRQLIGASK
FYS"
gene 429510..430061
/locus_tag="CD196_0370"
/db_xref="GeneID:8463491"
CDS 429510..430061
/locus_tag="CD196_0370"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_003213417.1"
/db_xref="GI:260682132"
/db_xref="GeneID:8463491"
/translation="MQSLNEIIAENLKKIRKEKHLSLDKIAQLSGVSKSMLSQIEKCE
VNPTISTLKKITNGLKISFTSLMERQESDIELIQKSDIDHFIEDNGKYISYPIFPFDS
KRRFEIFMIEIEEGGNLDSNAELPGTQEFITVFSGEVTIKINGEDYIVSSGNSIRFKA
DVSHIYRNSGKGIAKMSMVVYYI"
misc_feature 429510..430037
/locus_tag="CD196_0370"
/note="DNA-binding transcriptional repressor PuuR;
Provisional; Region: PRK09943"
/db_xref="CDD:182158"
misc_feature 429534..429707
/locus_tag="CD196_0370"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(429546..429548,429558..429560,429633..429635)
/locus_tag="CD196_0370"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(429555..429557,429630..429632)
/locus_tag="CD196_0370"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(429576..429581,429612..429614,429621..429623,
429633..429638)
/locus_tag="CD196_0370"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
misc_feature <429894..430052
/locus_tag="CD196_0370"
/note="Cupin domain; Region: Cupin_2; pfam07883"
/db_xref="CDD:203791"
gene 430147..431079
/locus_tag="CD196_0371"
/db_xref="GeneID:8463492"
CDS 430147..431079
/locus_tag="CD196_0371"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213418.1"
/db_xref="GI:260682133"
/db_xref="GeneID:8463492"
/translation="MNNKKAVFFFCSDLKKDPVASNVIKCCEEIMDLNQTDIVIDDNF
VLEFKDKNNNLFHFVKTKDVISHNYKYYLPILNRHFRDYDFAGVVNWHEGENAPEHIL
TAHTIGDVPTGEFGNSNPRYFKNLINAIEDIKNENLLDEFTTLTEATHWSGTTYGEES
KLITEYSVPMLDIEIGSSSDSFNNSIAIQVLAKSLIRVFDCDEPLKTLLCVGGVHFEK
SFSDIIKNKEYNISIGHVLPNQWIVSGMYDDESGFEKLEKCINSIEGGIDCIVFHDKL
KGTYKEQCRKLGEKLNVPVFKHKILKNPKDLPIW"
misc_feature 430357..431040
/locus_tag="CD196_0371"
/note="D-aminoacyl-tRNA deacylase; Region: tRNA_deacylase;
cl00716"
/db_xref="CDD:193915"
gene 431134..431997
/locus_tag="CD196_0372"
/db_xref="GeneID:8463493"
CDS 431134..431997
/locus_tag="CD196_0372"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213419.1"
/db_xref="GI:260682134"
/db_xref="GeneID:8463493"
/translation="MILSYFALLIRVVLLAFERVVVRLLGDEEGDIYKNIASSFLFFF
IGGVCLLPFSIMDRVSDWSFLIPCYISSLVYSIGSVAYVTSLATGEVSLVTPINSLNS
LFLLLLSVIFLGEGLSLAKVAGIIIMIGGVFILKKVSSFLKNVSVIFNNLPCRLMFLY
IFLQSVGRVLDKAFFVQVSPILYSTILYFFVGLNLFIFLAFKKKQKIICEIFSNKKGL
SILSGAINGYSYLALLIALNNLELSIAEPFSQVSMIITLILAHFIFKENIKEKIPGSI
LILIGGWLLLL"
gene 432244..434106
/gene="bglF"
/locus_tag="CD196_0373"
/db_xref="GeneID:8463494"
CDS 432244..434106
/gene="bglF"
/locus_tag="CD196_0373"
/codon_start=1
/transl_table=11
/product="PTS system beta-glucoside-specific transporter
subunit IIABC"
/protein_id="YP_003213420.1"
/db_xref="GI:260682135"
/db_xref="GeneID:8463494"
/translation="MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDA
LKKVQGVMSIVNGAQFQVVIGNSVVDVYDEILKVCPLDTNDSTVKTEEKINLGTRFIE
FIINIFQPLIFAIAGAGILKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVA
VTTANVLKCNRLVAIAAVGYLLLPATTTALSEGVELFGFTIPNIAYNAQVFPAILCVS
FLATMEKIFNKYSPKPIRTFFVPMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYN
KMGFLVVGLLAAFLPFMVATGMHKALIPYSINTIGKLGYEALYMTSSLAHNISESGAC
FAVALRTKDETLKQTALSAGISALMGITEPALYGITLQHKRAMLGVVFSSAISGTFLG
LFAVKGFVIVGPGLASMSMFIDPNNGNNLIFASIGFVIAILGSFIITLIIWKEDTNTV
ESSIGDVVEEELEEEKEVNILVTPVEGKVIDLSKVNDELFASKTLGDGVAIIPTNGNL
YAPCDSEVVMLFETKHAIGLRTKNGAEILIHIGINTVSMNGDGFKTFVKTGDNVKEGD
LLIQFDLDKISHANLDSTVMIVNNNGADYAYKVLNQSYGNVKKGSILFDVKGGI"
misc_feature 432250..434094
/gene="bglF"
/locus_tag="CD196_0373"
/note="PTS system, beta-glucoside-specific IIABC
component; Region: PTS-II-ABC-beta; TIGR01995"
/db_xref="CDD:162649"
misc_feature 432253..432477
/gene="bglF"
/locus_tag="CD196_0373"
/note="PTS_IIB, PTS system, glucose/sucrose specific IIB
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIB_glc; cd00212"
/db_xref="CDD:29267"
misc_feature 432316..432336
/gene="bglF"
/locus_tag="CD196_0373"
/note="active site turn [active]"
/db_xref="CDD:29267"
misc_feature 432319..432321
/gene="bglF"
/locus_tag="CD196_0373"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29267"
misc_feature 432517..433590
/gene="bglF"
/locus_tag="CD196_0373"
/note="Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
transport and metabolism]; Region: PtsG; COG1263"
/db_xref="CDD:31455"
misc_feature 433654..434091
/gene="bglF"
/locus_tag="CD196_0373"
/note="Phosphotransferase system IIA components
[Carbohydrate transport and metabolism]; Region: NagE;
COG2190"
/db_xref="CDD:32373"
misc_feature order(433702..433713,433723..433728,433792..433797,
433801..433806,433822..433830,433846..433854,
433858..433860,433870..433872,433876..433881,
433915..433917,434011..434013,434020..434022)
/gene="bglF"
/locus_tag="CD196_0373"
/note="HPr interaction site; other site"
/db_xref="CDD:29265"
misc_feature order(433702..433704,433708..433713,433717..433719,
433723..433728,433795..433797,433801..433803,
433813..433815,433852..433854,433858..433860,
433870..433872,433876..433881,433885..433887,
434011..434013)
/gene="bglF"
/locus_tag="CD196_0373"
/note="glycerol kinase (GK) interaction site [polypeptide
binding]; other site"
/db_xref="CDD:29265"
misc_feature order(433807..433809,433813..433815,433858..433860,
433864..433866)
/gene="bglF"
/locus_tag="CD196_0373"
/note="active site"
/db_xref="CDD:29265"
misc_feature 433858..433860
/gene="bglF"
/locus_tag="CD196_0373"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29265"
gene 434109..435575
/gene="bglA"
/locus_tag="CD196_0374"
/db_xref="GeneID:8465891"
CDS 434109..435575
/gene="bglA"
/locus_tag="CD196_0374"
/codon_start=1
/transl_table=11
/product="6-phospho-beta-glucosidase"
/protein_id="YP_003213421.1"
/db_xref="GI:260682136"
/db_xref="GeneID:8465891"
/translation="MRKFPEGFLWGGATAANQFEGGWNLGGKGWSVSDVAKAHFDADV
KDYKSNNEITTKDIEEGLAHPEDEVNYPKRHGSDFYHHYKEDIALMAEMGFKTYRMSI
AWSRIFPNGDDKEPNEEGLQFYDDVFDELISYGIEPLVTMSHYEPPLNIVLNYDGWYS
RQVINMFVRYVETICERYKNKVKYWLTFNEVDSMIRHPYTTGGLVRDRFKDKNFEEVI
FQAMHHQFVASALATKICHEIIPNSKVGCMLTKLTYYPYTCRPEDVLATQQKMRSIYA
YSDTQVFGEYPVYLLSYFKNNNIQIAKEEHDDEIMKKYPVDFISFSYYMSSCEAADTT
GLDITPGNTLLAVKNPYLEMSEWGWQIDSIGLRISLIELYDRYRKPLFIVENGLGAKD
ILTEDKKVHDQYRINYLKEHFKCMLDAIIEDGVELWGYTSWGCIDLVSESTKQMSKRY
GYIYVDADDYGKGTYNRYKKDSFYWYKKVIENNSIDFK"
misc_feature 434109..435566
/gene="bglA"
/locus_tag="CD196_0374"
/note="Glycosyl hydrolase family 1; Region: Glyco_hydro_1;
cl01046"
/db_xref="CDD:207297"
gene 435599..436435
/gene="bglG"
/locus_tag="CD196_0375"
/db_xref="GeneID:8465888"
CDS 435599..436435
/gene="bglG"
/locus_tag="CD196_0375"
/codon_start=1
/transl_table=11
/product="beta-glucoside bgl operon transcription
antiterminator"
/protein_id="YP_003213422.1"
/db_xref="GI:260682137"
/db_xref="GeneID:8465888"
/translation="MNYIIKKVLNSSVVLVHDAKYNEFILLGKGIGYGKKTGEYICGS
NDNQMFVPVENTKSKKFLELMDDIPVDILKITQEIIVEAEKLLNSSFNKNLYLILADH
FNFAIERMRKGIKITNRVFWEIKNYYPNEFKVGMVAIYMVEERLGIQLPEEEAANIAF
HFANAMASDGNSYDTIKYAKVIGEIINIFVFSLNRTLDKKSMHYMRFITHIKFFVERF
FSDSMLSSGDDLLFNQMKRSNPKEMLIALKVRDFLEKKYGKKLTNEEIAFLVVHIARV
KQ"
misc_feature 435599..436432
/gene="bglG"
/locus_tag="CD196_0375"
/note="transcriptional antiterminator BglG; Provisional;
Region: PRK09772"
/db_xref="CDD:170086"
misc_feature 435827..436093
/gene="bglG"
/locus_tag="CD196_0375"
/note="PRD domain; Region: PRD; pfam00874"
/db_xref="CDD:201484"
misc_feature 436148..436423
/gene="bglG"
/locus_tag="CD196_0375"
/note="PRD domain; Region: PRD; pfam00874"
/db_xref="CDD:201484"
gene 437001..438584
/locus_tag="CD196_0376"
/db_xref="GeneID:8465893"
CDS 437001..438584
/locus_tag="CD196_0376"
/note="[glutamine-hydrolyzing]"
/codon_start=1
/transl_table=11
/product="asparagine synthetase"
/protein_id="YP_003213423.1"
/db_xref="GI:260682138"
/db_xref="GeneID:8465893"
/translation="MINLEEKYLTRKDTYMIKILEYNGHIRNWKVLCEELGIDSSLCR
DERERAILVEAYKTWGYDMANHMHGMFAFALWDTVEKKLFCLRDQFGVKPFYYYETEN
GKLLYGSSIRKIMEQPGFVKELNEDMLQIYMSFTYVAGENTFFRGVKKLMPGHYLVYQ
NKTVCIGRYWKPEFHPDHSKSIEEWTDEIHTTLQKIMPEVKSENETAELFLSGGVDSS
YILAMSDIEKTGSCGYEEERFDESKLAQQTANILGCKNSRYIITPEEYFASVPYVMYH
MEQPTGDASAIVFAIGCKAAAENTNICYSGEGADEFFGGYNIYHKAECYGENLKTFYI
GNTNIMNEGEKRKILKKYNPDVLPIEVVKGIYEETEELDTLTNMSNVDIQIWLEGDIY
FNIDKMSTAVGLEVRMPLTDTRIFDIASRIPSEYKVKGKENKIAFRTAASKTLPEEIA
FRNKLGFIVPIRIWMADDQYNKDIRDKFNSEIADKFFNIDEINEIFNDYISGNSDNWR
KIWMIYTFLVWYEIYFVKC"
misc_feature <437055..437513
/locus_tag="CD196_0376"
/note="Glutamine amidotransferases class-II (GATase)
asparagine synthase_B type. Asparagine synthetase B
catalyses the ATP-dependent conversion of aspartate to
asparagine. This enzyme is a homodimer, with each monomer
composed of a glutaminase domain and a...; Region: AsnB;
cd00712"
/db_xref="CDD:48476"
misc_feature order(437067..437075,437142..437144)
/locus_tag="CD196_0376"
/note="active site"
/db_xref="CDD:48476"
misc_feature 437625..438380
/locus_tag="CD196_0376"
/note="The C-terminal domain of Asparagine Synthase B.
This domain is always found associated n-terminal
amidotransferase domain. Family members that contain this
domain catalyse the conversion of aspartate to asparagine.
Asparagine synthetase B catalyzes the...; Region:
Asn_Synthase_B_C; cd01991"
/db_xref="CDD:30178"
misc_feature order(437628..437636,437694..437702,437874..437876,
437913..437921)
/locus_tag="CD196_0376"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30178"
misc_feature order(437628..437636,437694..437702,437874..437876,
437913..437921)
/locus_tag="CD196_0376"
/note="Molecular Tunnel; other site"
/db_xref="CDD:30178"
gene complement(438649..439245)
/locus_tag="CD196_0377"
/db_xref="GeneID:8463495"
CDS complement(438649..439245)
/locus_tag="CD196_0377"
/codon_start=1
/transl_table=11
/product="radical SAM protein"
/protein_id="YP_003213424.1"
/db_xref="GI:260682139"
/db_xref="GeneID:8463495"
/translation="MNILYTIENSIYVNITNTCPCSCVFCIRNEKDEVANSGSLWLEH
EPSVDEVKEAFNKYNLDDYDEIVFCGYGEPLMRINELIEVAKFIKEKSSIKIRINTNG
LSDLIHNKKTAILLKDVIDTVSISLNAPNKEAYNRVTQPKFGEKSFDYMLGFARDCKK
YIKEVAFSVVDEISPEEIEESKQLAKKLDIPLRVRHKN"
misc_feature complement(438658..439242)
/locus_tag="CD196_0377"
/note="radical SAM protein, TatD family-associated;
Region: tatD_link_rSAM; TIGR04038"
/db_xref="CDD:188553"
misc_feature complement(<438790..439209)
/locus_tag="CD196_0377"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature complement(order(438868..438870,438943..438951,
439027..439032,439039..439041,439165..439173,
439177..439179,439183..439185,439189..439191))
/locus_tag="CD196_0377"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene complement(439272..439790)
/locus_tag="CD196_0378"
/db_xref="GeneID:8463496"
CDS complement(439272..439790)
/locus_tag="CD196_0378"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213425.1"
/db_xref="GI:260682140"
/db_xref="GeneID:8463496"
/translation="MNKVTSKKTTYIVTSALFASIICLTIAYILHIPVGGNNGYVHIG
DAFIYLAATILPTNYAIAASAIGAGLADLSTGAAIWVIPTIIIKPILVLFFTSKSDKI
INKRNIVASVVAGIVGLVLYMFAEGIIIGSFTSAFVMSLLGLLQPIGSFIVFIILGMA
LDKLDFKKRYFN"
misc_feature complement(439287..439739)
/locus_tag="CD196_0378"
/note="ECF-type riboflavin transporter, S component;
Region: ECF-ribofla_trS; cl01942"
/db_xref="CDD:211450"
gene complement(440161..441159)
/gene="ldhA"
/locus_tag="CD196_0379"
/db_xref="GeneID:8463497"
CDS complement(440161..441159)
/gene="ldhA"
/locus_tag="CD196_0379"
/codon_start=1
/transl_table=11
/product="(R)-2-hydroxyisocaproate dehydrogenase"
/protein_id="YP_003213426.1"
/db_xref="GI:260682141"
/db_xref="GeneID:8463497"
/translation="MKILVFGARDYEEPVIKKWSEEHKDVQVDIYPENMTEENVVKAK
GYDGISIQQTNYIDNPYIYETLKDAGVKVIASRTAGVDMIHFDLVNENGLIVTNVPSY
SPNAIAELAVTQAMNLLRKTPLVKKKVCEGDYRWIAELLGTEVRSITVGVIGTGKIGA
TSAKLFKGLGANVIAFDQYPNSDLNDILTYKDSLEDLLKEADLITLHTPLLEGTKHMI
NKDTLAIMKDGAYIVNTGRGGLINTGDLIEALESGKIRAAALDTFETEGLFLNKKMNP
GELTDPEINKLLSMEQVIFTHHLGFFTSTAIENIVYSSLSSAVEVIKTGTATNRVN"
misc_feature complement(440164..441159)
/gene="ldhA"
/locus_tag="CD196_0379"
/note="D-lactate dehydrogenase; Validated; Region:
PRK08605"
/db_xref="CDD:181499"
misc_feature complement(440260..440826)
/gene="ldhA"
/locus_tag="CD196_0379"
/note="D-isomer specific 2-hydroxyacid dehydrogenase, NAD
binding domain; Region: 2-Hacid_dh_C; pfam02826"
/db_xref="CDD:202418"
gene 441836..443035
/gene="hadA"
/locus_tag="CD196_0380"
/db_xref="GeneID:8466282"
CDS 441836..443035
/gene="hadA"
/locus_tag="CD196_0380"
/codon_start=1
/transl_table=11
/product="isocaprenoyl-CoA:2-hydroxyisocaproate
CoA-transferase"
/protein_id="YP_003213427.1"
/db_xref="GI:260682142"
/db_xref="GeneID:8466282"
/translation="MLLEGVKVVELSSFIAAPCCAKMLGDWGAEVIKIEPIEGDGIRV
MGGTFKSPASDDENPMFELENGNKKGVSINVKSKEGVEILHKLLSEADIFVTNVRVQA
LEKMGIAYDQIKDKYPGLIFSQILGYGEKGPLKDKPGFDYTAYFARGGVSQSVMEKGT
SPANTAAGFGDHYAGLALAAGSLAALHKKAQTGKGERVTVSLFHTAIYGMGTMITTAQ
YGNEMPLSRENPNSPLMTTYKCKDGRWIQLALIQYNKWLGKFCKVINREYILEDDRYN
NIDSMVNHVEDLVKIVGEAMLEKTLDEWSALLEEADLPFEKIQSCEDLLDDEQAWAND
FLFKKTYDSGNTGVLVNTPVMFRNEGIKEYTPAPKVGQHTVEVLKSLGYDEEKINNFK
DSKVVRY"
misc_feature 441842..443026
/gene="hadA"
/locus_tag="CD196_0380"
/note="Predicted acyl-CoA transferases/carnitine
dehydratase [Energy production and conversion]; Region:
CaiB; COG1804"
/db_xref="CDD:31989"
misc_feature 442046..442573
/gene="hadA"
/locus_tag="CD196_0380"
/note="CoA-transferase family III; Region: CoA_transf_3;
pfam02515"
/db_xref="CDD:202268"
gene 443065..443874
/gene="hadI"
/locus_tag="CD196_0381"
/db_xref="GeneID:8466208"
CDS 443065..443874
/gene="hadI"
/locus_tag="CD196_0381"
/codon_start=1
/transl_table=11
/product="activator of 2-hydroxyisocaproyl-CoA
dehydratase"
/protein_id="YP_003213428.1"
/db_xref="GI:260682143"
/db_xref="GeneID:8466208"
/translation="MLKMYTMGLDIGSTASKGVILKNGEDIVASETISSGTGTTGPSR
VLEKLYGKTGLAREDIKKVVVTGYGRMNYSDADKQISELSCHARGVNFIIPETRTIID
IGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSELGSISMNSQNE
VSISSTCTVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLVKRIGVQRNVVMVGG
VARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEAKESQKEVKNI"
misc_feature <443074..443829
/gene="hadI"
/locus_tag="CD196_0381"
/note="Activator of 2-hydroxyglutaryl-CoA dehydratase
(HSP70-class ATPase domain) [Lipid metabolism]; Region:
COG1924"
/db_xref="CDD:32107"
misc_feature 443077..443823
/gene="hadI"
/locus_tag="CD196_0381"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:214262"
misc_feature order(443092..443103,443107..443109,443113..443115)
/gene="hadI"
/locus_tag="CD196_0381"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
gene 443883..445115
/gene="hadB"
/locus_tag="CD196_0382"
/db_xref="GeneID:8466211"
CDS 443883..445115
/gene="hadB"
/locus_tag="CD196_0382"
/codon_start=1
/transl_table=11
/product="subunit of oxygen-sensitive
2-hydroxyisocaproyl-CoA dehydratase"
/protein_id="YP_003213429.1"
/db_xref="GI:260682144"
/db_xref="GeneID:8466211"
/translation="MKMSEKKEARVVINDLLAEQYANAFKAKEEGRPVGWSTSVFPQE
LAEVFDLNVLYPENQAAGVAAKKGSLELCEIAESKGYSIDLCAYARTNFGLLENGGCE
ALDMPAPDFLLCCNNICNQVIKWYENISRELDIPLIMIDTTFNNEDEVTQSRIDYIKA
QFEEAIKQLEIISGKKFDPKKFEEVMKISAENGRLWKYSMSLPADSSPSPMNGFDLFT
YMAVIVCARGKKETTEAFKLLIEELEDNMKTGKSSFRGEEKYRIMMEGIPCWPYIGYK
MKTLAKFGVNMTGSVYPHAWALQYEVNDLDGMAVAYSTMFNNVNLDRMTKYRVDSLVE
GKCDGAFYHMNRSCKLMSLIQYEMQRRAAEETGLPYAGFDGDQADPRAFTNAQFETRI
QGLVEVMEERKKLNRGEI"
misc_feature 443898..445079
/gene="hadB"
/locus_tag="CD196_0382"
/note="benzoyl-CoA reductase, bzd-type, N subunit; Region:
benz_CoA_bzdN; cl11464"
/db_xref="CDD:143741"
misc_feature 443994..445079
/gene="hadB"
/locus_tag="CD196_0382"
/note="2-hydroxyglutaryl-CoA dehydratase, D-component;
Region: HGD-D; pfam06050"
/db_xref="CDD:203384"
gene 445115..446242
/gene="hadC"
/locus_tag="CD196_0383"
/db_xref="GeneID:8466209"
CDS 445115..446242
/gene="hadC"
/locus_tag="CD196_0383"
/codon_start=1
/transl_table=11
/product="subunit of oxygen-sensitive
2-hydroxyisocaproyl-CoA dehydratase"
/protein_id="YP_003213430.1"
/db_xref="GI:260682145"
/db_xref="GeneID:8466209"
/translation="MEAILSKMKEVVENPNAAVKKYKNETGKKAIGCFPVYCPEEIIH
AAGMLPVGIWGGQTELDLAKQYFPAFACSIMQSCLEYGLKGAYDELSGVIIPGMCDTL
ICLGQNWKSAVPHIKYISLVHPQNRKLEAGVKYLISEYKGVKRELEEICGYEIEEAKI
HESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIKSGFFMRKEEHTELVKDLIAK
LNAMPEEVCSGKKVLLTGILADSKDILDILEDNNISVVADDLAQETRQFRTDVPAGDD
ALERLARQWSNIEGCSLAYDPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPL
VRKDIEDSGIPTLYVEIDQQTQNNEQARTRIQTFAEMMSLA"
misc_feature 445166..446224
/gene="hadC"
/locus_tag="CD196_0383"
/note="benzoyl-CoA reductase, bzd-type, N subunit; Region:
benz_CoA_bzdN; cl11464"
/db_xref="CDD:143741"
misc_feature 445214..446230
/gene="hadC"
/locus_tag="CD196_0383"
/note="2-hydroxyglutaryl-CoA dehydratase, D-component;
Region: HGD-D; pfam06050"
/db_xref="CDD:203384"
gene 446290..447423
/gene="acdB"
/locus_tag="CD196_0384"
/db_xref="GeneID:8466210"
CDS 446290..447423
/gene="acdB"
/locus_tag="CD196_0384"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase"
/protein_id="YP_003213431.1"
/db_xref="GI:260682146"
/db_xref="GeneID:8466210"
/translation="MLYNKEQELLRKAVRDFVSKELDTLPAEMDKTGVMPKELIKKLA
DAKFISSNIPEEYGGGGAGYVSYAIVMEEIARRCASTATFVTAGSSLASLPILYNGTE
EQKQKYLKGIATGELIGAFGLTEPGAGSDAGGQQTTAELVGDHYILNGRKTFITNGPF
CDVAIVIAVTDRSKGLRGTSAFIVESKWDGFSTGAHEDKMGIRGTETSDLIFENVKVP
KENLLGKEGQGFKIAMGTLEVGRIGVAALALGIAQGALDEAVKYTKQRVQFGKPIAKF
QNTQFTIADMETKVCAARGLVYDAAQKRDAGMRVAQESAMAKYYASEIANEVAYKALQ
LHGGYGFIKDYEIERMYRDARIVSIYEGTSEVQKMVISSNVLK"
misc_feature 446290..447420
/gene="acdB"
/locus_tag="CD196_0384"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:32143"
misc_feature 446305..447420
/gene="acdB"
/locus_tag="CD196_0384"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:209100"
misc_feature order(446560..446562,446650..446652,446656..446658,
446749..446751,446755..446757,447364..447372,
447376..447378,447382..447384)
/gene="acdB"
/locus_tag="CD196_0384"
/note="active site"
/db_xref="CDD:173838"
gene 447456..448241
/gene="etfB1"
/locus_tag="CD196_0385"
/db_xref="GeneID:8465808"
CDS 447456..448241
/gene="etfB1"
/locus_tag="CD196_0385"
/codon_start=1
/transl_table=11
/product="electron transfer flavoprotein subunit beta"
/protein_id="YP_003213432.1"
/db_xref="GI:260682147"
/db_xref="GeneID:8465808"
/translation="MKILVCVKQVPDTNEVRINKETGTLIRDGVPSILNPDDANALEE
ALKIKDEHDDVTITVITMGPPQADFMLRECLAMGADDAILLSDRAFGGADTWATSNTI
AAGISKVGDYDIIFAGRQAIDGDTAQVGPQIAEKLDIPQVTYVQDFKIEGKDIIVQRQ
LEDGYELIKVSTPVLLTAVKELNTPRYMSVDKIVKAYKHDVKVWTIDDLDVNKEEVGL
KASPTKVFRSFTPEPRGKGEILEGKADEIASKIIIGLKQKHII"
misc_feature 447459..448070
/gene="etfB1"
/locus_tag="CD196_0385"
/note="The electron transfer flavoprotein (ETF) serves as
a specific electron acceptor for various mitochondrial
dehydrogenases. ETF transfers electrons to the main
respiratory chain via ETF-ubiquinone oxidoreductase. ETF
is an heterodimer that consists of an...; Region:
ETF_beta; cd01714"
/db_xref="CDD:30169"
misc_feature order(447471..447476,447558..447560,447567..447569,
447639..447641,447804..447809,447813..447818,
447831..447842)
/gene="etfB1"
/locus_tag="CD196_0385"
/note="Ligand binding site [chemical binding]; other site"
/db_xref="CDD:30169"
misc_feature 447531..448010
/gene="etfB1"
/locus_tag="CD196_0385"
/note="Electron transfer flavoprotein domain; Region: ETF;
pfam01012"
/db_xref="CDD:201550"
gene 448260..449297
/gene="etfA1"
/locus_tag="CD196_0386"
/db_xref="GeneID:8466047"
CDS 448260..449297
/gene="etfA1"
/locus_tag="CD196_0386"
/codon_start=1
/transl_table=11
/product="electron transfer flavoprotein subunit alpha"
/protein_id="YP_003213433.1"
/db_xref="GI:260682148"
/db_xref="GeneID:8466047"
/translation="MNDIKDLSSYKNVWIFAEQREGKIAPVVIELLGEGRKLAKEVDA
ELCAILLGKDVDGLAKELITFGADKVYVADDALLEKYTTDAYTKVIKDAIDEIKPEIM
LFGATHIGRDLAPRIASRVGTGLTADCTKLEIDPEDKKIKQTRPAFGGNIMATIICPN
HRPQMSTVRPGVMDKAEKDETRTGEVIALDYKITQDDIRTTVLETVKTKKDLVSLTDA
NVIVSGGLGLGGPEGFEMLKKLADKLGGVVGSSRAAVDAGWIDHSHQVGQTGTTVKPN
LYIACGISGAIQHLAGMQSSDFIIAINKNPAAPILEIADYGVVGDLHEIVPMLIEKLD
SVDDLLEAIKA"
misc_feature 448290..449264
/gene="etfA1"
/locus_tag="CD196_0386"
/note="Electron transfer flavoprotein, alpha subunit
[Energy production and conversion]; Region: FixB; COG2025"
/db_xref="CDD:32208"
misc_feature 448293..448805
/gene="etfA1"
/locus_tag="CD196_0386"
/note="The electron transfer flavoprotein (ETF) serves as
a specific electron acceptor for various mitochondrial
dehydrogenases. ETF transfers electrons to the main
respiratory chain via ETF-ubiquinone oxidoreductase. ETF
is an heterodimer that consists of an...; Region:
ETF_alpha; cd01715"
/db_xref="CDD:30170"
misc_feature 448896..449150
/gene="etfA1"
/locus_tag="CD196_0386"
/note="Electron transfer flavoprotein FAD-binding domain;
Region: ETF_alpha; pfam00766"
/db_xref="CDD:189709"
gene 449780..451411
/locus_tag="CD196_0387"
/db_xref="GeneID:8466044"
CDS 449780..451411
/locus_tag="CD196_0387"
/codon_start=1
/transl_table=11
/product="sigma-54-dependent transcriptional regulator"
/protein_id="YP_003213434.1"
/db_xref="GI:260682149"
/db_xref="GeneID:8466044"
/translation="MDNNLIGLIEHVENPAILCKESGEIIYCNHLIDSIFSFLDIKKP
RNINELDSNFDKTEILTDSKKKIAFRELRMTAHIYNMKDNNNENNIVYLFEKSLISDK
VIEDIIEHIDEVVVVFNKDGVIEKMNTVSDEILPFKRTEVLGRNITDLVRQGLVEEPI
ILNMLKVKKKIYRNIVYPDGKLIAYTAVPRWDSKGKLTGGVLTGRDISRVIKLESQIK
YSDISEDTEYISQSKIMDNIKKVVKRAAASDSSIFINGESGVGKEIIARTIYKYSSRR
DKPFIAINCGAIPNELLESEFFGYEEGSFTGAKKKGKKGLFEEANGGTIFLDEIGELP
MQMQKKLLRVIQENTITRIGGSKPIKIDVRYISATNISHEDLRNNLKFRQDLYYRLSV
IPVKIPPLRERKEDIVPLVNYFLKLYNEKYNREVEVSPKVIELLEEYSWPGNIRELKN
IIERFVVLSAKNVIGEDEFNMLINLDMIDNETDDLSPIVVNGIMNLNDAYKIVDQIMI
SKAINKYGSITKAAEVIGIYPSTIHRKIKSGHIHV"
misc_feature 450134..450403
/locus_tag="CD196_0387"
/note="PAS domain; Region: PAS_9; pfam13426"
/db_xref="CDD:205604"
misc_feature <450446..451408
/locus_tag="CD196_0387"
/note="Response regulator containing CheY-like receiver,
AAA-type ATPase, and DNA-binding domains [Signal
transduction mechanisms]; Region: AtoC; COG2204"
/db_xref="CDD:32386"
misc_feature 450482..450976
/locus_tag="CD196_0387"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 450545..450568
/locus_tag="CD196_0387"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(450548..450571,450761..450763,450887..450889)
/locus_tag="CD196_0387"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 450749..450766
/locus_tag="CD196_0387"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 450944..450946
/locus_tag="CD196_0387"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 451286..451390
/locus_tag="CD196_0387"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:214025"
gene complement(451546..452472)
/gene="fba"
/locus_tag="CD196_0388"
/db_xref="GeneID:8463498"
CDS complement(451546..452472)
/gene="fba"
/locus_tag="CD196_0388"
/codon_start=1
/transl_table=11
/product="fructose-bisphosphate aldolase"
/protein_id="YP_003213435.1"
/db_xref="GI:260682150"
/db_xref="GeneID:8463498"
/translation="MALITTKEMFKKAYEGGFAIGAFNISDLEQLQGVLKAAKAKNSY
VMIQASMSAVKYAGPHTLVEMVKAASDEIGVDVALHLDHGPNMDAIKTCIDAGFSSVM
IDGSHFDFEENVRITKEAVEYAHSKGVVVEAELGVLAGTEDDVTSDVHKYTQPAEAVE
FVERTGVDSLAIAIGTSHGAFKFKGEAKLRFDILEEIQSKLPGFPIVLHGASAVDQNA
VATCNEFGGNIAGAKGVPVDMLRKASSMAVCKINMDTDLRLAMTAAIRKFLAENPKEF
DPRKYIGAGRDAIQAVVESKIDDVLGSANSIN"
misc_feature complement(451558..452457)
/gene="fba"
/locus_tag="CD196_0388"
/note="Tagatose-1,6-bisphosphate (TBP) aldolase and
related Type B Class II aldolases. TBP aldolase is a
tetrameric class II aldolase that catalyzes the reversible
condensation of dihydroxyacetone phosphate with
glyceraldehyde 3-phsophate to produce tagatose 1; Region:
TBP_aldolase_IIB; cd00947"
/db_xref="CDD:29573"
misc_feature complement(451558..452451)
/gene="fba"
/locus_tag="CD196_0388"
/note="fructose-bisphosphate aldolase; Provisional;
Region: PRK09197"
/db_xref="CDD:181692"
misc_feature complement(order(451666..451668,451675..451677,
451687..451689,451696..451701,451705..451710,
452047..452049,452266..452271,452278..452280,
452290..452292,452302..452310,452317..452319,
452377..452379,452386..452394))
/gene="fba"
/locus_tag="CD196_0388"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:29573"
misc_feature complement(order(451708..451713,451717..451719,
451837..451839,451843..451848,451930..451932,
451936..451944,452224..452229))
/gene="fba"
/locus_tag="CD196_0388"
/note="active site"
/db_xref="CDD:29573"
misc_feature complement(order(451846..451848,451939..451941,
452224..452226))
/gene="fba"
/locus_tag="CD196_0388"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:29573"
misc_feature complement(order(451837..451839,451843..451845,
451930..451932,451936..451938,451942..451944))
/gene="fba"
/locus_tag="CD196_0388"
/note="Na+ binding site [ion binding]; other site"
/db_xref="CDD:29573"
gene 452802..453131
/locus_tag="CD196_0389"
/db_xref="GeneID:8466067"
CDS 452802..453131
/locus_tag="CD196_0389"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213436.1"
/db_xref="GI:260682151"
/db_xref="GeneID:8466067"
/translation="MPQIKIRGINENDICKISKKMINDLVEAVKCPRDYFEIECIKSV
AIRDGKIADVYPFVEVAWFDRGQEVQDIVARIITDSIRNNLDVESMDLAFTVFEKEKY
YENGEHF"
misc_feature 452805..453125
/locus_tag="CD196_0389"
/note="Domain of unknown function (DUF1904); Region:
DUF1904; pfam08921"
/db_xref="CDD:204095"
gene 453131..455737
/locus_tag="CD196_0391"
/pseudo
/db_xref="GeneID:8463499"
gene 453982..455100
/locus_tag="CD196_0390"
/db_xref="GeneID:8463501"
CDS 453982..455100
/locus_tag="CD196_0390"
/codon_start=1
/transl_table=11
/product="transposase-like protein b"
/protein_id="YP_003213437.1"
/db_xref="GI:260682152"
/db_xref="GeneID:8463501"
/translation="MIAVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVY
KNDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQNALKDLDNAYKKFFKEKAGFPKF
KSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPKGRILNATISKEPSGR
YYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQR
ELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNM
IRNCKLSRLISDVSWSEFIRQLEYKANWHGRQIVKVGKFFASSQICNKCGYKNEEVKD
LSIREWICPSCNETHDRDINASINILKEGLRLITTQNK"
misc_feature 453991..455091
/locus_tag="CD196_0390"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG0675"
/db_xref="CDD:31019"
misc_feature 453997..454128
/locus_tag="CD196_0390"
/note="Helix-turn-helix domain; Region: HTH_OrfB_IS605;
pfam12323"
/db_xref="CDD:204881"
misc_feature 454186..454809
/locus_tag="CD196_0390"
/note="Probable transposase; Region: OrfB_IS605;
pfam01385"
/db_xref="CDD:189964"
misc_feature 454717..454917
/locus_tag="CD196_0390"
/note="transposase, IS605 OrfB family, central region;
Region: tspaseT_teng_C; TIGR01766"
/db_xref="CDD:200129"
gene 455755..457125
/locus_tag="CD196_0392"
/db_xref="GeneID:8463500"
CDS 455755..457125
/locus_tag="CD196_0392"
/codon_start=1
/transl_table=11
/product="tRNA (Uracil-5-)-methyltransferase"
/protein_id="YP_003213438.1"
/db_xref="GI:260682153"
/db_xref="GeneID:8463500"
/translation="MGGMSVKKKDVIEFEVDKMEFGGTSLSQVGDRVIHMKGGISGQK
VRAGVKKVRSKKAEVKMIELLENSPLETEETCKHFRECGGCTLLSVPYEKQLEIKEKQ
VMDLFLKQDLFGFQFLGIEGSPENKYYRNKMEYTFGDEVKNGPLTLGLHKKGKHIDIQ
TVEECMLVDEDFSKILVSSVEFFNEKKLPYYRTMNHKGYLRHLVVRKGIHTNEIMVNI
VTSSQEDFDMNEFKDMLLGIDLKAELVGVLHTINDGLADAVQCDELRVLYGRDYIQEE
ILGLKFKISPFSFFQTNTKGAEVLYSIARDFIGDYNDKVVFDLYSGTGSIGQVMAGAA
KKVYGIEIVEEAVVAANENAKLNGLTNCEFIAGDVAKVVKDLKDKPDLIIVDPPRPGI
HKDAIRDICGFGAKEIVYISCNPKSLVVDLVDFKGYGYEIKMVKCMDMFPNTPHCETV
VKLIRE"
misc_feature 455776..457101
/locus_tag="CD196_0392"
/note="SAM-dependent methyltransferases related to tRNA
(uracil-5-)-methyltransferase [Translation, ribosomal
structure and biogenesis]; Region: TrmA; COG2265"
/db_xref="CDD:32446"
misc_feature <456913..457119
/locus_tag="CD196_0392"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cl16911"
/db_xref="CDD:213141"
gene 457648..458682
/locus_tag="CD196_0393"
/db_xref="GeneID:8463502"
CDS 457648..458682
/locus_tag="CD196_0393"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213439.1"
/db_xref="GI:260682154"
/db_xref="GeneID:8463502"
/translation="MFKKKLIAVAMSITMISVGSFSYAHSGRTDSSGGHRDNKNKSGL
GSYHYHCGGYPAHLHNNGGCPYTGGGSSSGTTTSVNNEEKQKRSVGEKGYNQGYEDGY
KGNYSSSNYSGDYSDTYESKYSEGYEKGKAKLEEEEKVAKETGYNLGLTGAKSNNTYE
KEVLKNAYDTGYSTGYNEYKTKKIEEYKAKGIEDSNKDKEKMTFEENIDSEFIDAYNN
AYDEIQEQLKNDYTTQGFESAIKGERFDTSTIGNVKYANWFKEGYDNGKVKLPKAKES
VYNQGYNEEDFSIPYEMKSIETKLKGVYDEGLEKREEEKSRNATYGVGAGTAAVVAGV
VYKNKKRKKI"
gene 458769..458972
/locus_tag="CD196_0394"
/db_xref="GeneID:8463503"
CDS 458769..458972
/locus_tag="CD196_0394"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213440.1"
/db_xref="GI:260682155"
/db_xref="GeneID:8463503"
/translation="MGFNFRKSINLGGGLKLNLGKKSVGISAGVKGARVSVNSKGRKS
ATLSIPGTGISYTKTSTKKRKPK"
misc_feature 458775..458942
/locus_tag="CD196_0394"
/note="Protein of unknown function (DUF4236); Region:
DUF4236; pfam14020"
/db_xref="CDD:206190"
gene 459143..460303
/locus_tag="CD196_0395"
/db_xref="GeneID:8463504"
CDS 459143..460303
/locus_tag="CD196_0395"
/codon_start=1
/transl_table=11
/product="cell surface protein"
/protein_id="YP_003213441.1"
/db_xref="GI:260682156"
/db_xref="GeneID:8463504"
/translation="MKLSKTLLAIGMSVSLLIASCPTSNALSSINSIKGTNKYETAGL
IADKQNYDIAILINSENGLSDGLSASGLSGAKNAPILLTKKDTIPSETLKRLEKVKEV
YLIGGKNSIGASVQKILSDKKISINRISGTDRIDTSHKVAKEIGRVSTVKKVILTNAF
KGEPDAMSVASIAVRDKSPIVLTDGNTTSFATDGLETYAIGGKVSMSDKLINETKATR
IGGVDRYDTNKQIINKFYNGSKEFYIASGTDLVYSLVGSTIAQKTPIVLVGNGSNKSI
LKNASKITAIGNIDDVIIKQCLNITNNVGDSNTGIVKDTNSNNTNKPSNEPSSNNPGL
TDKSTVYVTPNGKSYHLTKNCSTLKRSKTINKVTLKQAKSQGKIDPCNVCVK"
misc_feature 459239..459493
/locus_tag="CD196_0395"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:202898"
misc_feature 459524..459781
/locus_tag="CD196_0395"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:202898"
misc_feature 459791..460003
/locus_tag="CD196_0395"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:202898"
gene complement(460834..461733)
/locus_tag="CD196_0396"
/db_xref="GeneID:8463505"
CDS complement(460834..461733)
/locus_tag="CD196_0396"
/codon_start=1
/transl_table=11
/product="integrase, catalytic region"
/protein_id="YP_003213442.1"
/db_xref="GI:260682157"
/db_xref="GeneID:8463505"
/translation="MVITLSKNEDKYKAIQSLFNEKKASLIQLCEIAKVNRSGYYKWL
NRDKSNLELENIKLATLITKIYEEKKGVFGSLRMTLQLNREYKLNVNHKRVYRLMRAV
GLRSICRKKKFSYVKCTQEVIAENVLNRKFSADKTSQKWLTDVTEFKLTDGTKAYLSA
ILDLGDRSIVSYVIGKSNNNNLVFETFNKAIEVYPNAKPIFHSDRGYQYTSRVFKSKL
LTQGMIQSMSRVGHCIDNAPMEGFWGILKVEMYYLRKFDTYEQLVKAIDDYIYYYNNF
RYQKRLNSMSPLEFRKYLSTEIA"
misc_feature complement(460867..461631)
/locus_tag="CD196_0396"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:177368"
misc_feature complement(461398..461565)
/locus_tag="CD196_0396"
/note="HTH-like domain; Region: HTH_21; pfam13276"
/db_xref="CDD:205456"
misc_feature complement(460984..461319)
/locus_tag="CD196_0396"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
misc_feature complement(460858..461016)
/locus_tag="CD196_0396"
/note="Integrase core domain; Region: rve_2; pfam13333"
/db_xref="CDD:205513"
gene complement(461727..462398)
/locus_tag="CD196_0397"
/db_xref="GeneID:8463506"
CDS complement(461727..462398)
/locus_tag="CD196_0397"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213443.1"
/db_xref="GI:260682158"
/db_xref="GeneID:8463506"
/translation="MSKTKVSSEQKIEAIESYLKGENSVIKIMEELNIGKRTFREWMR
NYETFGNDGLIKQSHKSCYSKEFKLNAIESYLNGEGSYDTISKKYKMRSVHPLKAWVK
EYNLHKVIKETPKGGLFMETRKTTLDERAEIVKDCIEHGLNYNLIAKKYFVSYSQVRR
WTLKYKENGIDALEDRRGKSKKEDELTQLDEIKLELKIVKAEKHKLQLENEFLKKLKI
IERGW"
misc_feature complement(462219..462371)
/locus_tag="CD196_0397"
/note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
/db_xref="CDD:205696"
misc_feature complement(461877..462212)
/locus_tag="CD196_0397"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG2963"
/db_xref="CDD:32783"
misc_feature complement(461856..462014)
/locus_tag="CD196_0397"
/note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
/db_xref="CDD:205696"
gene 463499..464872
/gene="rocR"
/locus_tag="CD196_0398"
/db_xref="GeneID:8463507"
CDS 463499..464872
/gene="rocR"
/locus_tag="CD196_0398"
/codon_start=1
/transl_table=11
/product="arginine utilization sigma-54 dependent
regulatory protein"
/protein_id="YP_003213444.1"
/db_xref="GI:260682159"
/db_xref="GeneID:8463507"
/translation="MNEILENIDEGVHFVNKDGKTIIYNNSVQKMEKMNRHDILANSF
FDIVNKMKINRSTLLEVLEKREVIKDNIQKYLDKNGKEITAINTTIPIDIKGEFVGAL
EISKNMTTIENLLNRNYKKNLVNKVSSRQKKGYEFDDILGESNLIKEAIEKSKKACKS
DASVFIYGETGTGKELFSQSIHYGSNRRNYPFIAQNCAALPESLFEGILFGTSKGGFT
GAIDRPGLFEQANKGTLLLDEINSMPIMLQAKLLRVLQEGYVRRVGGTKDIPIDVRII
ATTNESPKVILNEHKMRKDLYYRLNIIHIKIPPLRDRKEDILLLCKKFISKYNKKLNK
KVVGISDEAIKILKNYDWQGNIRELENIIYCTMSMMEDEVQIETSMINLNDYYNLKEN
KESNNYSLNDLEGKTLSKIISEIEEKYIYESLEKASYNITKAASILGMNRQNLQYKIK
KYNIKIL"
misc_feature 463538..463825
/gene="rocR"
/locus_tag="CD196_0398"
/note="PAS domain; Region: PAS_9; pfam13426"
/db_xref="CDD:205604"
misc_feature 463943..464425
/gene="rocR"
/locus_tag="CD196_0398"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 464000..464023
/gene="rocR"
/locus_tag="CD196_0398"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(464003..464026,464210..464212,464336..464338)
/gene="rocR"
/locus_tag="CD196_0398"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 464198..464215
/gene="rocR"
/locus_tag="CD196_0398"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 464393..464395
/gene="rocR"
/locus_tag="CD196_0398"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature <464786..464854
/gene="rocR"
/locus_tag="CD196_0398"
/note="Bacterial regulatory protein, Fis family; Region:
HTH_8; pfam02954"
/db_xref="CDD:202485"
gene 465128..466195
/locus_tag="CD196_0399"
/db_xref="GeneID:8466542"
CDS 465128..466195
/locus_tag="CD196_0399"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="YP_003213445.1"
/db_xref="GI:260682160"
/db_xref="GeneID:8466542"
/translation="MRKVRVGIWGFGAMGIGMANMILKKEGIEIVSVCSRSTSGKSMY
DVLGIERGERPEVIINKNYEEVFREKSVDVVLLATDSFTKKAFDKIIFLLNRKINVIS
TAEQMAYPQADDADLAKKMDEVAKENGVSILGTGINPGFVLDLLVLALSGTCEEVTSI
KAKRVNDLSPFGKSVMEEQGVGVTREEFIKGVEDKTIAGHVGFVESINMIADGLGWKL
DKIEQTKEPIMTTVDRKSKYGEALAGNVAGCRQCGYGYVNGDVLIEMEHPQQIIPEVE
GIKTGDYVSIKGIPNIDLQINPEIPGGVGTYAMIVNSIPLIINARPGLKTMLDIPVPR
AIMGDIRNQIEVELEEESKAN"
misc_feature 465137..466129
/locus_tag="CD196_0399"
/note="Uncharacterized conserved protein related to
dihydrodipicolinate reductase [Function unknown]; Region:
COG3804"
/db_xref="CDD:33598"
misc_feature 465137..465517
/locus_tag="CD196_0399"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
gene 466292..466600
/locus_tag="CD196_0400"
/db_xref="GeneID:8463508"
CDS 466292..466600
/locus_tag="CD196_0400"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213446.1"
/db_xref="GI:260682161"
/db_xref="GeneID:8463508"
/translation="MDAKINDWVIIHNIVLTPEERAPQVPEDTKKVSLEMWVKGFIQS
DASIGDLVEVKTITGRLVKGNLLKVNPYYTHDYGKCIPELLQIGIQAKEILFGGVYNE
"
gene 466593..468023
/locus_tag="CD196_0401"
/db_xref="GeneID:8463509"
CDS 466593..468023
/locus_tag="CD196_0401"
/codon_start=1
/transl_table=11
/product="pyridoxal-phosphate dependent enzyme"
/protein_id="YP_003213447.1"
/db_xref="GI:260682162"
/db_xref="GeneID:8463509"
/translation="MNNSTSIKDMSYQAVMGRNNEIMKNAIGLDYSSFEQEGIGFDYE
KMMSETGYTLQDIEAIQSQYAVGNTPLIELKNLTKLARKCAKEGKGAKIFVKDEAMNA
SGSFKARRAATAVYHAKQMGYKGVIAATSGNYGAAVASQAAMQGLKCIIVQECYDSNG
VGQPEIIEKARKCEAYGAEVVQLTVGPELFYTFLVLLEETGYFNASLYSPFGIAGVET
LGYELAIQFREKYKKDPDIVVCTNAGGGNLTGTARGLIKAGSINTKVVGASVDLKGLH
MASDNQFNKKSFTTGHTGFGIPYCTWPDRSDVPRSAARPLRYMDRYVLVKQGEVFYTT
ELLAQLEGIERGPAGNTSLAAAFSLAQELDEDKVIVVQETEYTGAGKHICPQLTFARE
NGIDIKFGNPREEIAGVNLILPERPELLKCVDIDMNKIRKSFIKNCISNNHIDNIDKL
SNRDIEFLMEEVKSSRDFVVDVLNNL"
misc_feature 466782..467705
/locus_tag="CD196_0401"
/note="Pyridoxal-phosphate dependent enzyme; Region: PALP;
pfam00291"
/db_xref="CDD:201135"
misc_feature 466797..467705
/locus_tag="CD196_0401"
/note="Tryptophan synthase beta superfamily (fold type
II); this family of pyridoxal phosphate (PLP)-dependent
enzymes catalyzes beta-replacement and beta-elimination
reactions. This CD corresponds to
aminocyclopropane-1-carboxylate deaminase (ACCD),
tryptophan...; Region: Trp-synth-beta_II; cd00640"
/db_xref="CDD:107202"
misc_feature order(466908..466913,466989..466991,467322..467336,
467634..467636)
/locus_tag="CD196_0401"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:107202"
misc_feature 466911..466913
/locus_tag="CD196_0401"
/note="catalytic residue [active]"
/db_xref="CDD:107202"
gene 468101..468475
/gene="oraS"
/locus_tag="CD196_0402"
/db_xref="GeneID:8463510"
CDS 468101..468475
/gene="oraS"
/locus_tag="CD196_0402"
/codon_start=1
/transl_table=11
/product="D-ornithine aminomutase S component"
/protein_id="YP_003213448.1"
/db_xref="GI:260682163"
/db_xref="GeneID:8463510"
/translation="MKKREDDFEVRRKHLQELSDDELKERFWNLATQIVEPMIELGKK
NTTPSIERSVLLRMGFSSLEVKPILEGVMERGLIGKGAGHVVYKLAKSKNITVREAGL
LLVKGEYWDEVTCLFREGVESC"
gene 468469..470673
/gene="oraE"
/locus_tag="CD196_0403"
/db_xref="GeneID:8466399"
CDS 468469..470673
/gene="oraE"
/locus_tag="CD196_0403"
/codon_start=1
/transl_table=11
/product="D-ornithine aminomutase E component"
/protein_id="YP_003213449.1"
/db_xref="GI:260682164"
/db_xref="GeneID:8466399"
/translation="MLKENKKLDIDYILKDLDKYKPKRRGWVWREHLENLEMGPFKYK
DCTKPLKKSVGLPSSKYFNNIDPQPSPVITTEIASGRFEDDIRRMRMAAHHGADHLMV
IRTAGQSHFDGLIEGTPQGIGGVPITRKQVRAQRKALDFIEEEVGRPINYHSYVSGVA
GPEVAVMFAEEGVNGAHQDPQYNVLYRNINMVRSFVDACEAKKIMAFANIAQIDGAHN
ANATAREAWKVMPELMVQHALNSIFSEKIGIDKSNICLSTVPPTAPPAPCLRIDLPYA
VALRELFSDYKMRAQMNTKYMESSTREATVTHVLNLLTSVLTRADIQSTITPDEGRNV
PWHIYNIEACDTAKQALVGMDGLMDMIELKDVGELRDKARELKERAVLYMEEISEVGG
YFESVEQGFFVDSGNYPERNGDGISRKIKGGVGEGTVYEREEDYLAPVTAHFGYNNVA
QYDENAIDNPSMLIDGCTFENPDKIIYIDELDDFDNVENRLKESYEYRNGTKIKPEME
WCADGIVMITMMLPTDKRTAEFAALEFVKKMNLQEIEVISREVMHESEGTRIEVKGRV
PFDIDLNNLVIPEEPKVLTDEEIRADIEEKPMKIVSATVGEDEHSVGLREIIDIKHGG
IEKYGIECHYLGTSVPVEKLVDAAIELNADAILASTIISHDDIHYKNMKKLHDYCVEK
GIRDKVMIACGGTQVTPEIAVEQGIDAGFGRNSKGIHVATFLVEKRREMSNK"
misc_feature <468649..469785
/gene="oraE"
/locus_tag="CD196_0403"
/note="D-Lysine 5,6-aminomutase alpha subunit; Region:
Lys-AminoMut_A; pfam09043"
/db_xref="CDD:117609"
misc_feature 470263..470631
/gene="oraE"
/locus_tag="CD196_0403"
/note="B12 binding domain (B12-BD). This domain binds
different cobalamid derivates, like B12 (adenosylcobamide)
or methylcobalamin or methyl-Co(III)
5-hydroxybenzimidazolylcobamide, it is found in several
enzymes, such as glutamate mutase, methionine synthase...;
Region: B12-binding; cd02067"
/db_xref="CDD:30205"
misc_feature order(470287..470307,470317..470319,470437..470445,
470449..470457,470551..470553,470599..470601,
470608..470610,470617..470619)
/gene="oraE"
/locus_tag="CD196_0403"
/note="B12 binding site [chemical binding]; other site"
/db_xref="CDD:30205"
misc_feature 470296..470298
/gene="oraE"
/locus_tag="CD196_0403"
/note="cobalt ligand [ion binding]; other site"
/db_xref="CDD:30205"
gene 470673..472082
/locus_tag="CD196_0404"
/db_xref="GeneID:8466398"
CDS 470673..472082
/locus_tag="CD196_0404"
/codon_start=1
/transl_table=11
/product="component of D-ornithine aminomutase"
/protein_id="YP_003213450.1"
/db_xref="GI:260682165"
/db_xref="GeneID:8466398"
/translation="MENSKVSLKIDVLVAEIGSTTTVVNAFHDINTNNPIFLGQGQAP
TTVFEGGDVRNGLSGAIKDLANKLSVDDIEYNDMFATSSAAGGLKMTVHGLVYDMTVK
AAKEAALGAGAVIRQITSGRIKRTDLNKIKEINPNIILIAGGVDYGERDTAIYNAEMI
ASMNLGIPVIYAGNVENQEEIRLIFEDTNYKLYITENVYPKIDLLNIEPTRRIIQSVF
EEHITTAPGMKYIKEMVNENITPTPGAVMEASKLLYKNIGDLLTLDVGGATTDVHSVT
DGSDYINKILVNPEPTAKRSVEGDLGVYVNMKNIVEVIGKENLQSELYIDIDAVIENY
PPIPKSKEEILFVERLTKEAVVKAMLRHSGKIRNIYGTTGKVKIAEGKDLTEVRYIVG
TGGALTRLPSRIEILDNMLKYNKNNELLFPKEKTKILIDNDYIMASMGVLSKKYEEAS
LKLLLKSLNFEEERLCILG"
misc_feature 470703..471995
/locus_tag="CD196_0404"
/note="MutL protein; Region: MutL; pfam13941"
/db_xref="CDD:206112"
gene 472067..473131
/locus_tag="CD196_0405"
/db_xref="GeneID:8463511"
CDS 472067..473131
/locus_tag="CD196_0405"
/codon_start=1
/transl_table=11
/product="amino acid racemase"
/protein_id="YP_003213451.1"
/db_xref="GI:260682166"
/db_xref="GeneID:8463511"
/translation="MYPRLEIDIEKLKHNAKLISQMCHERSIKISFVTKSFCAQKEIV
EEICSEGIDHIADSRIQNLKKLQDINLPKILIRIPMLSELEEVINYCDISFNSELETI
KKLNELCESKNIIHKIVLMFDLGDLREGYFYEEDFFNNVREIVRLKNIEIIGIATNLT
CYGAIIPSRENIGRLVSIAKRMEEKFGINLEIVSGGNSSSIHLLINNNMPEGITNLRI
GESILLGRETAYGENINGTYQDAFKLICQVVECKEKPSVPIGEIGVDAFRNKPVYEDK
GILKRAIIAIGKQDINIDSLIPIDTDIKILGASSDHMILDVSNTKYDYKLGDNLEFLL
TYGGIMSSSTSKYVSKKIIV"
misc_feature 472070..473125
/locus_tag="CD196_0405"
/note="Predicted amino acid racemase [Amino acid transport
and metabolism]; Region: COG3457"
/db_xref="CDD:33260"
misc_feature 472070..473125
/locus_tag="CD196_0405"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme Alanine Racemase-like 1; Region:
PLPDE_III_AR_like_1; cd06815"
/db_xref="CDD:143490"
misc_feature order(472070..472072,472169..472171,472175..472177,
472238..472243,472247..472252,472268..472270,
472313..472315,472358..472360,472364..472366,
472376..472378,472445..472456,472811..472822,
472907..472909,472913..472915,472919..472921,
472928..472933,473108..473110)
/locus_tag="CD196_0405"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143490"
misc_feature order(472163..472165,472169..472171,472232..472234,
472295..472297,472427..472429,472448..472450,
472538..472540,472655..472660,472715..472726,
472928..472930)
/locus_tag="CD196_0405"
/note="active site"
/db_xref="CDD:143490"
misc_feature order(472163..472165,472169..472171,472232..472234,
472295..472297,472427..472429,472538..472540,
472655..472660,472715..472726)
/locus_tag="CD196_0405"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143490"
misc_feature order(472169..472171,472448..472450,472538..472540,
472724..472726)
/locus_tag="CD196_0405"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143490"
misc_feature 472169..472171
/locus_tag="CD196_0405"
/note="catalytic residue [active]"
/db_xref="CDD:143490"
gene 473161..474582
/locus_tag="CD196_0406"
/db_xref="GeneID:8463512"
CDS 473161..474582
/locus_tag="CD196_0406"
/codon_start=1
/transl_table=11
/product="Na+/H+ antiporter"
/protein_id="YP_003213452.1"
/db_xref="GI:260682167"
/db_xref="GeneID:8463512"
/translation="MKERECRKASLFDAMIPITCLILFLSLGVLVYGSSPHVPLIGAA
AVAGLVAVYRLGFKWKELELSMFNSIKMAMQAILIIIIIGVLIGTWIVSGVVPCMIYW
GLKILSPNIFLVASTLVCAIVSLATGSSWSTMGTVGVALLGIGQSLGMPIGLIVGSII
SGAYFGDKLSPLSETTNLAPAMAGTDLFTHIKYMLYSTIPSLLICLVIYGVIGMKYSG
QALDIKQIELIRSTLDSTFNTLSPVLLLAPAIVIGLVVFKVPAIPGLIVGAVLGVLFA
VVFQGESMNTILDAAQNGYVSSTQIQEVDALLSKGGIMNMMSTVSLTICALSLGGILE
KTGMLEVVASSLLRLAKGVFGTVLCTMVTCTITNIIAGEQYLSIVIPGRMYNKEYKKR
GIHPKMLSRALEDSGTLTSPLVPWNTCGAYITATLGVSALTYGPYALLNIINPIVSLV
LIACKFKIARIEDEPETCLNFDV"
misc_feature 473179..474510
/locus_tag="CD196_0406"
/note="Na+/H+ antiporter NhaC; Region: antiport_nhaC;
TIGR00931"
/db_xref="CDD:188097"
gene 475011..475475
/locus_tag="CD196_0407"
/db_xref="GeneID:8463513"
CDS 475011..475475
/locus_tag="CD196_0407"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213453.1"
/db_xref="GI:260682168"
/db_xref="GeneID:8463513"
/translation="MTRISNITIAEQSEYCFLAIRKTIDFMVEFSEFSKQSFEKISKY
LEERGILSSGAPIVCFHNMDLAKLDVEVGFPVATYIDGKNEILQRIVPAQKIITAIDL
GPYELQDPTLEDLFSWANSNGYKLHGDIYYQYLNDINRPASEYLTKMMLPII"
misc_feature 475017..475469
/locus_tag="CD196_0407"
/note="GyrI-like small molecule binding domain; Region:
GyrI-like; cl01368"
/db_xref="CDD:207387"
gene 475773..476135
/locus_tag="CD196_0408"
/db_xref="GeneID:8463514"
CDS 475773..476135
/locus_tag="CD196_0408"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213454.1"
/db_xref="GI:260682169"
/db_xref="GeneID:8463514"
/translation="MKIYDILTRFYIQDIEKAIPFYENLLKEKCSLRFSYKEVGLELA
QIGNVLLLSGSDDALKPFIETKSTFMVDSVDEWRSYLLDNGAVVVRDKKKVPTGYNMT
LRHPDGTIIEYVQHTKQD"
misc_feature 475794..476108
/locus_tag="CD196_0408"
/note="This domain superfamily is found in a variety of
structurally related metalloproteins, including the type I
extradiol dioxygenases, glyoxalase I and a group of
antibiotic resistance proteins; Region: Glo_EDI_BRP_like;
cd06587"
/db_xref="CDD:211348"
misc_feature order(475803..475805,475890..475892,475923..475925,
475929..475931,475974..475976,476076..476078,
476100..476102,476106..476108)
/locus_tag="CD196_0408"
/note="active site"
/db_xref="CDD:211348"
gene 476706..477590
/locus_tag="CD196_0409"
/db_xref="GeneID:8463515"
CDS 476706..477590
/locus_tag="CD196_0409"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_003213455.1"
/db_xref="GI:260682170"
/db_xref="GeneID:8463515"
/translation="MDKRREAAMSYKVINVITAIDYIEEHLSEKLDLDIIANAVHYSK
YHLHRTFTTSVGLTMHDYIKRRKLTEAAKLLVFSKKPIIEIALIAGYESQQAFTSIFK
AMYKKSPNKYRKEQEFYPLQLRFVLKKDNLFSKNVLELEKEIKLASMSDIPLWMNLVR
LVIDGFPNLQEEEYIYQLEQYILEERALILKLNNVAIANMVFNRETRSIDFFGIHPQY
RNSDIAQVFLKKVIEDFLIDTDISITTFREGDKADTGHRDMIKKLGFAEAELLVEFGY
PTQKFILPCVEERDNRQN"
misc_feature 476772..476897
/locus_tag="CD196_0409"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature 476793..477044
/locus_tag="CD196_0409"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature 476937..477047
/locus_tag="CD196_0409"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 477848..479962
/locus_tag="CD196_0410"
/db_xref="GeneID:8463516"
CDS 477848..479962
/locus_tag="CD196_0410"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213456.1"
/db_xref="GI:260682171"
/db_xref="GeneID:8463516"
/translation="MSENKQVVNCDIIASNSKHNMCEHDVELLTFFPDEIAHLIEINN
KLDNAFKKAENLVDKLDKDYMDAKMYMVKNRGEIDPHEMFQNEQGLKQIDNYGAFMVK
VRDKINKIKDSPYFARIDFRLKDMDDESKYYIGRFAFDYEDELIILDWRSPIASMFYD
YEIGKAGYDAPIGWVDGEITRKRQFKIKNGKLEYALESSINIQDDILQKELSHTSDEK
MKSIISTIQKEQNQIIRNDKADTLIIQGVAGSGKTSIALHRIAFLLYRFKDKISANNV
IILSPNKVFGDYISNVLPELGEEPLCELSFENIAEVQLDRVINFESEKDPLEINDAKW
SERVRFKSTLDFVKLIDDYIKQMPNKIFIPKDYTFGSFTAKSDWIQSRFEAYNRYPVK
KRLEKVAEDIHYKFESDNIMEEDLPKVKSILKSLNGMLTIKNTLTLYKDFFKQMNISN
MFVMAEKKTLEWSDVYPFIYIHAAYEGIQEDKIIRHIVIDEMQDYTPIQYAVINLLFK
CKKTILGDFGQLVNPNHTHTLDDMKQLYNDGELVMLNKSYRSTFEIINFAKKIQDISS
LEPIERHGEEPALLKCNNEQDEINKIKIEIEEFKKSDNATLGIILKTDNDAKAVYDAL
REEYSVHLISSESSSFTKGVSITSIKMSKGLEFDEVIVPSVNNKTYYSDYDRSLLYIA
CTRAMHKLKLTYVGTLTQLISM"
misc_feature 478160..479935
/locus_tag="CD196_0410"
/note="Superfamily I DNA and RNA helicases [General
function prediction only]; Region: COG3973"
/db_xref="CDD:33754"
misc_feature 478544..>478723
/locus_tag="CD196_0410"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:205425"
misc_feature 479672..479917
/locus_tag="CD196_0410"
/note="Family description; Region: UvrD_C_2; pfam13538"
/db_xref="CDD:205716"
gene complement(480224..482467)
/locus_tag="CD196_0411"
/db_xref="GeneID:8463517"
CDS complement(480224..482467)
/locus_tag="CD196_0411"
/codon_start=1
/transl_table=11
/product="antibiotic resistance ABC transporter
ATP-binding protein"
/protein_id="YP_003213457.1"
/db_xref="GI:260682172"
/db_xref="GeneID:8463517"
/translation="MSNIIIKGLTQNNLKNISFKIPKNKIVVFTGVSGSGKSSIVFDT
IAAESQRQMNETYSSFIRNRLPKYRKPQVELIDNLTASVIVDQTPLGGNARSTVGTIS
DLYSSLRLLFSRIGEPYIGTTSYFSFNDPNGMCKNCSGIGRVKVINIESIINPENSWN
TGCINDSLFKPNSWYWKQYAESGLFDLDKPIKDYSFEEYNLLLYGSKNKDGKQENPKI
EGIFNKYNQTYLNRDISNMSKHTKEKSERLITDKECPVCHGKRLNKETLNCNILGYSI
ADMCNMELTDLYDLLLQIKDKRTETVIKTLTDGLKRMIDIGLPYLHLNRESSSLSGGE
AQRLKLVRYMGSSLTGMTYIFDEPSAGMHPRDVHRMNQLLKKLRDRGNTVLVVEHDKD
VISIADEVIDIGPSAGTQGGHVVFQGSYDKLLLANTLTSNAMNLSLPIKTDSRHPKGT
LPIRDACINNLKHIDVDLPVGIMTVVTGVAGSGKSTLISRVFAQKYEKDVIKIDQSPV
TATNRSMPATFLGFFDEIRKVFAKENNVEEGLFSFNSKGACPVCDGKGVLVTELVFMD
PIINTCEACKGTRYSEEVLSKLYKGKCIVDVLSMTVDESLEFFTEKKLCKILQTMKDV
GLPYMTLGQPLSTLSGGERQRIKLAKNLNKKGTIYILDEPTTGLHGSDIEKLMLIFEH
IVDKGNTVIIIEHNLDVLKQADWVIDIGPDGGKNGGQVVFEGTPLEMFERGCTITSDF
LRKSINI"
misc_feature complement(<482120..482458)
/locus_tag="CD196_0411"
/note="The excision repair protein UvrA domain I;
Nucleotide excision repair in eubacteria is a process that
repairs DNA damage by the removal of a 12-13-mer
oligonucleotide containing the lesion. Recognition and
cleavage of the damaged DNA is a multistep...; Region:
ABC_UvrA_I; cd03270"
/db_xref="CDD:73029"
misc_feature complement(481214..>481540)
/locus_tag="CD196_0411"
/note="The excision repair protein UvrA domain I;
Nucleotide excision repair in eubacteria is a process that
repairs DNA damage by the removal of a 12-13-mer
oligonucleotide containing the lesion. Recognition and
cleavage of the damaged DNA is a multistep...; Region:
ABC_UvrA_I; cd03270"
/db_xref="CDD:73029"
misc_feature complement(480290..481117)
/locus_tag="CD196_0411"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(480365..481051)
/locus_tag="CD196_0411"
/note="AAA domain; Region: AAA_21; pfam13304"
/db_xref="CDD:205484"
misc_feature complement(481013..481036)
/locus_tag="CD196_0411"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(480383..480385,480479..480484,
480953..480955,481010..481018,481022..481027))
/locus_tag="CD196_0411"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(480953..480964)
/locus_tag="CD196_0411"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(480527..480556)
/locus_tag="CD196_0411"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(480479..480496)
/locus_tag="CD196_0411"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(480461..480472)
/locus_tag="CD196_0411"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(480377..480397)
/locus_tag="CD196_0411"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 482799..483515
/locus_tag="CD196_0412"
/db_xref="GeneID:8463518"
CDS 482799..483515
/locus_tag="CD196_0412"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213458.1"
/db_xref="GI:260682173"
/db_xref="GeneID:8463518"
/translation="MILIVILSIFIIASINIIILGKENIRDIVIPLTLFIVSDFLFLC
GNIICRGGVMLLFIGLFAIPLMLIAFIWICVHMIKLYYKKDLNKRKMIGCIFSIFISI
GTIFIPSPSESFRFKLYEKDYSVVAKAILKVYDEKKLSSESVFYIQSDKNELEKIFSK
EVIKKMKKLNRNLDVVKISGNRNLVYFFFGAELQSIDGIVIFKDLKHVKPKLDFINRS
IQAPRLEYITNNVYYFKGEL"
gene 483543..484481
/locus_tag="CD196_0413"
/db_xref="GeneID:8463519"
CDS 483543..484481
/locus_tag="CD196_0413"
/codon_start=1
/transl_table=11
/product="beta-lactamase"
/protein_id="YP_003213459.1"
/db_xref="GI:260682174"
/db_xref="GeneID:8463519"
/translation="MKRKNNFIWIVILLVVVAMGVYYVGRKHNNTKQKHDKNHINSEL
NKSKVENNDKNKKEKINMVDYSDCFEGISGGAIFYNTKNKEYNIYNKELIETRRSPCS
TFKIVSTLIGLEKGVINSKESVMGYDGTEYPNKNWNKNLSLEEAFKESCVWYYKKLID
KVDAKSVQNILDDLKYGNCDISEWEGDLKNGKGHLNGFWLESSLQISPKEQVQTMAKI
FEGDTNFKKEHINILRDIMKIDVNDKNINVYGKTGTGFDEKNKRVDAWFVGMLEREGD
TYYFAIKSDDSNKEITGPKVKEIAINIIKKYYSVRE"
misc_feature 483726..484463
/locus_tag="CD196_0413"
/note="Beta-lactamase class D [Defense mechanisms];
Region: COG2602"
/db_xref="CDD:32594"
gene 484825..485508
/locus_tag="CD196_0414"
/db_xref="GeneID:8463520"
CDS 484825..485508
/locus_tag="CD196_0414"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_003213460.1"
/db_xref="GI:260682175"
/db_xref="GeneID:8463520"
/translation="MEILKCENLTKIYGSNQTRVTALNNVNLSVQKGDFVSIVGASGS
GKSTLLHLLGGVDRPTSGKIYVEDTEISSLKEEALAVFRRRKVGLIYQFYNLIPTLDV
RKNILLPMLLDKRKVDEDRFSEIVSILGLSDRLNHLPSQLSGGQQQRVSIARSLIYRP
AILLADEPTGNLDRKNSEEIVDLLNLSNKRFNQTILLITHDEKIALEANRIVTMEDGV
IVSEKVVKK"
misc_feature 484831..485496
/locus_tag="CD196_0414"
/note="ABC-type antimicrobial peptide transport system,
ATPase component [Defense mechanisms]; Region: SalX;
COG1136"
/db_xref="CDD:31331"
misc_feature 484834..485481
/locus_tag="CD196_0414"
/note="ATP-binding cassette domain of the transporters
involved in export of lipoprotein and macrolide, and cell
division protein; Region: ABC_MJ0796_LolCDE_FtsE; cd03255"
/db_xref="CDD:213222"
misc_feature 484942..484965
/locus_tag="CD196_0414"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213222"
misc_feature order(484951..484956,484960..484968,485098..485100,
485320..485325,485422..485424)
/locus_tag="CD196_0414"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213222"
misc_feature 485089..485100
/locus_tag="CD196_0414"
/note="Q-loop/lid; other site"
/db_xref="CDD:213222"
misc_feature 485248..485277
/locus_tag="CD196_0414"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213222"
misc_feature 485308..485325
/locus_tag="CD196_0414"
/note="Walker B; other site"
/db_xref="CDD:213222"
misc_feature 485332..485343
/locus_tag="CD196_0414"
/note="D-loop; other site"
/db_xref="CDD:213222"
misc_feature 485410..485430
/locus_tag="CD196_0414"
/note="H-loop/switch region; other site"
/db_xref="CDD:213222"
gene 485505..488165
/locus_tag="CD196_0415"
/db_xref="GeneID:8463521"
CDS 485505..488165
/locus_tag="CD196_0415"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_003213461.1"
/db_xref="GI:260682176"
/db_xref="GeneID:8463521"
/translation="MNILQEYTLDFVRRNKRSSIAIMLAILLTTTMMSSLCGLLYTMW
TDFIRLSIEKEGNWHGELFDYTYGSDLPLIENFSSVDDVMVKGQWYVGKINDEKRDYI
IYRNATSEYWNSMPEKDTIIEGRRPNNANEIALSKQYFENNPSVKIGDKITLPIGDRI
LNGKPLEPIAQKSKGESFKKISETTLTIVGKVDVSTSSVIPAYTALGYLDRTSIKPND
SITVYLRFKNIRDTYKELPKLAKSLGWKTNEYGKYNLKYNSNYLLKMLVFSPEQKASM
SSISKFSTPIMYLTIAIFTVAVFVMVIYNAFSLSANARLTQLGILSSVGASPKQIKMS
VVFEGFLLTIIPLPIGLFLGWLLCNRLIVYINSVNYHTDVPEVVFTYGIPAFLPAVLL
TIVTVWISALIPARKVSKISPIEAIRQGDSVKIKKSHKYSLGKIFGIEGELASNALRA
RKKSYRTATISLTLSFLLLTCFLHIIANQEGAKAVYGSDNYKDQRDIAVYLENSEPVE
SAFIEKLDNTEGVKSSLYYQKMSASTWLTEKDASKELAKNGGFKSIVSSKKYSPIERD
GKFRIISNIIGLDDKSFTEYCRQISVDPKLFYDTKNPTSIVYNKEEDINRSTRRNKVY
IDYLNLSIGDNIKLNEKVYDEDKGDYTYNMKVGAITSTLPKTVDTSSKYTLMQIVPMS
MVQEISKNYDEVSRLRSNRLIGVFKVNNREDIPRVREKLESIYNKDYGSGDYSIEDVL
ESEKQKASGIKTMNLIVGFITGLLAMIGLSNVLATVSGNTRSRRQEFAMLRSVGLSPE
GIKKMLVLEGLFLGITPLLLSIPVQIGIVYAFLRINEIYFIEYLPFAPISTIIGFTIL
ILFIVIASYMTGYKQLKNENIVESIKNETI"
misc_feature 485541..486758
/locus_tag="CD196_0415"
/note="ABC-type transport system, involved in lipoprotein
release, permease component [Cell envelope biogenesis,
outer membrane]; Region: LolE; COG4591"
/db_xref="CDD:34229"
misc_feature 485541..>486005
/locus_tag="CD196_0415"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:205030"
misc_feature 486375..486743
/locus_tag="CD196_0415"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
misc_feature <487386..488033
/locus_tag="CD196_0415"
/note="ABC-type transport system, involved in lipoprotein
release, permease component [Cell envelope biogenesis,
outer membrane]; Region: LolE; COG4591"
/db_xref="CDD:34229"
misc_feature 487779..>488036
/locus_tag="CD196_0415"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
gene complement(488346..489527)
/locus_tag="CD196_0416"
/db_xref="GeneID:8463522"
CDS complement(488346..489527)
/locus_tag="CD196_0416"
/codon_start=1
/transl_table=11
/product="two-component sensor histidine kinase"
/protein_id="YP_003213462.1"
/db_xref="GI:260682177"
/db_xref="GeneID:8463522"
/translation="MKTPRNINSTVVFIIFCLIITFLLSVILTTITSFNEYNVLSKAL
GASYEYNPKSTESILKSLKNSSDKDFKTGNEILSKHGYSKSTFWSKNFFYFLVISFGI
ISTMATVVYIIKHRTNKQKLSRINNLTQYLEEVNLGKESVLLRCEDEFSHLEDEIYKT
VGELRCSKEFALKERQTLSDNLADIAHQLKTPITSMSLMAQLLSENCPDEEIDYINRL
TNQISRLERLVSSLLTLSKLDASTLIFESKLIDVHSLLTYAIEPIEGSLREKHQTFTI
EASPSVEFEIDINWTLEALLNILKNCSEHIEDGGYIVAYYSQNPLYVEIIIEDNGKGF
AQEELPYIFNRFYRGKNASKDSIGIGLALSKSIIERQNGTLHAENCHNGGARFIIKFY
T"
misc_feature complement(488355..489263)
/locus_tag="CD196_0416"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature complement(488817..488984)
/locus_tag="CD196_0416"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(488832..488834,488844..488846,
488853..488855,488865..488867,488874..488876,
488886..488888,488931..488933,488940..488942,
488952..488954,488961..488963,488973..488975))
/locus_tag="CD196_0416"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(488967..488969)
/locus_tag="CD196_0416"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(488355..488648)
/locus_tag="CD196_0416"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(488367..488369,488373..488378,
488391..488393,488397..488399,488445..488456,
488526..488531,488535..488537,488541..488543,
488547..488549,488616..488618,488625..488627,
488637..488639))
/locus_tag="CD196_0416"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(488625..488627)
/locus_tag="CD196_0416"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(488448..488450,488454..488456,
488529..488531,488535..488537))
/locus_tag="CD196_0416"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(489527..490189)
/locus_tag="CD196_0417"
/db_xref="GeneID:8463523"
CDS complement(489527..490189)
/locus_tag="CD196_0417"
/codon_start=1
/transl_table=11
/product="two-component response regulator"
/protein_id="YP_003213463.1"
/db_xref="GI:260682178"
/db_xref="GeneID:8463523"
/translation="MAKILLLEDDDTITFGIKTSLEKKNHTVCCYNTIAEAKKNFDKT
IDLILLDLNLPDGIGYEFCQYVKSIEDTPVIFLTVRDDEKDIIRGLDMGADDYVVKPF
LLSVLQSRINAVLRRTHSNTNNTITCGNISLNKVEVKAYLDNVEVLLTAGEYKLLLSL
MENKNRAMTRTKLLEMLWDVDGNFVNDNTLTVTIKRLREKLKNPPCIKTLRGIGYRME
DS"
misc_feature complement(489533..490183)
/locus_tag="CD196_0417"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature complement(489845..490177)
/locus_tag="CD196_0417"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(489887..489892,489899..489901,
489956..489958,490013..490015,490034..490036,
490163..490168))
/locus_tag="CD196_0417"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(490034..490036)
/locus_tag="CD196_0417"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(490013..490015,490016..490018,
490022..490027))
/locus_tag="CD196_0417"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(489884..489892)
/locus_tag="CD196_0417"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(489539..489814)
/locus_tag="CD196_0417"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature complement(order(489548..489550,489563..489565,
489587..489592,489614..489616,489623..489625,
489680..489685,489740..489742))
/locus_tag="CD196_0417"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene complement(490334..490867)
/locus_tag="CD196_0418"
/db_xref="GeneID:8463524"
CDS complement(490334..490867)
/locus_tag="CD196_0418"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003213464.1"
/db_xref="GI:260682179"
/db_xref="GeneID:8463524"
/translation="MNELAKEVEYTKRTIYKYFSCKEDLFFAVVLRGYKRLWDNVKIE
SAKGKTGFEKIKLSYFAFHKFYSVEPSLLCLMGMIGIVNSEKSDTDMLFKEKFFSFNK
FMFDEIQGMFEIGKNDRSIRHDIEIPTLMYSSIFTLTGFFNLLSVTGKSYLNNFNIDE
EKFIETTLALLIDSIKA"
misc_feature complement(490448..490867)
/locus_tag="CD196_0418"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature complement(490781..>490867)
/locus_tag="CD196_0418"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene complement(491181..492113)
/locus_tag="CD196_0419"
/db_xref="GeneID:8463525"
CDS complement(491181..492113)
/locus_tag="CD196_0419"
/codon_start=1
/transl_table=11
/product="transposase-like protein b"
/protein_id="YP_003213465.1"
/db_xref="GI:260682180"
/db_xref="GeneID:8463525"
/translation="MVVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVY
KNDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQNALKDLENAYEKFFKEKAGFPKF
KSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGR
YYVSLCCTDVDIEVFENTNNQTGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQR
ELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNM
IKNHKLSRLISDVSWSEFIRQLEYKANWYGRQIV"
misc_feature complement(491196..492104)
/locus_tag="CD196_0419"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG0675"
/db_xref="CDD:31019"
misc_feature complement(491967..492098)
/locus_tag="CD196_0419"
/note="Helix-turn-helix domain; Region: HTH_OrfB_IS605;
pfam12323"
/db_xref="CDD:204881"
misc_feature complement(491286..491909)
/locus_tag="CD196_0419"
/note="Probable transposase; Region: OrfB_IS605;
pfam01385"
/db_xref="CDD:189964"
misc_feature complement(491184..491378)
/locus_tag="CD196_0419"
/note="transposase, IS605 OrfB family, central region;
Region: tspaseT_teng_C; TIGR01766"
/db_xref="CDD:200129"
gene 493127..493732
/locus_tag="CD196_0420"
/db_xref="GeneID:8463526"
CDS 493127..493732
/locus_tag="CD196_0420"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="YP_003213466.1"
/db_xref="GI:260682181"
/db_xref="GeneID:8463526"
/translation="MKIKENVLMLDSTRGSNCFIVFDKEIILIDTGLPFMGKNIIKEL
KTLGIKLTDIKHILLTHHDVDHISNIKLLKEKTGAKVWAHVEDIPFIIGEKDRPGFKK
FIGKAISRRLIKDVEPYGENMKIGNIKIIHTPGHTPGHVCMIFEDVLFAGDLVKNKNG
NIVPYPNPWNWDYKKMMKSIRELDNLKYEWICMSHGTPCIK"
misc_feature 493175..493711
/locus_tag="CD196_0420"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; smart00849"
/db_xref="CDD:197917"
misc_feature 493181..493720
/locus_tag="CD196_0420"
/note="Zn-dependent hydrolases, including glyoxylases
[General function prediction only]; Region: GloB; COG0491"
/db_xref="CDD:30837"
gene 494236..494985
/locus_tag="CD196_0421"
/db_xref="GeneID:8463527"
CDS 494236..494985
/locus_tag="CD196_0421"
/codon_start=1
/transl_table=11
/product="RpiR family transcriptional regulator"
/protein_id="YP_003213467.1"
/db_xref="GI:260682182"
/db_xref="GeneID:8463527"
/translation="MRLESLVNQSYNSLNENDKIIIKQILICQREYRNFSCEKIANEC
NVSRATLLRLCRKIGLDSFSDLKYLLKNNQLEFVNNDNNFHDVCENYRLLMNELQKIS
FQDICKIIYDAETIYIYGTGNEQKSLAQEIKRIFLSVGKCVIDLFDIGEIEFMRESFQ
KSDLFIIISLSGETKSGIEIAKFINNHIHTISLTRLDNNTIATLCEYNLYVETQKLDT
LQAISYEVVGAFYALLDLLHMNYIEYRRRKE"
misc_feature 494236..494979
/locus_tag="CD196_0421"
/note="Transcriptional regulators [Transcription]; Region:
RpiR; COG1737"
/db_xref="CDD:31923"
misc_feature 494236..494448
/locus_tag="CD196_0421"
/note="Helix-turn-helix domain, rpiR family; Region:
HTH_6; pfam01418"
/db_xref="CDD:201784"
misc_feature 494542..494946
/locus_tag="CD196_0421"
/note="RpiR-like protein. RpiR contains a SIS (Sugar
ISomerase) domain, which is found in many phosphosugar
isomerases and phosphosugar binding proteins. In E. coli,
rpiR negatively regulates the expression of rpiB gene.
Both rpiB and rpiA are ribose phosphate...; Region:
SIS_RpiR; cd05013"
/db_xref="CDD:88408"
misc_feature order(494608..494610,494740..494742)
/locus_tag="CD196_0421"
/note="putative active site [active]"
/db_xref="CDD:88408"
gene 494982..495746
/locus_tag="CD196_0422"
/db_xref="GeneID:8463528"
CDS 494982..495746
/locus_tag="CD196_0422"
/codon_start=1
/transl_table=11
/product="RpiR family transcriptional regulator"
/protein_id="YP_003213468.1"
/db_xref="GI:260682183"
/db_xref="GeneID:8463528"
/translation="MKIEGLFNKYYNSFTANDKYICECILNHKEDCIKLSIDEFADKY
HISTSALSRFAQKLQLPGYSELRVIIRLNETEVEYKNQSKHQLMDCYNKVIDDIEKKD
CSIMFERMKKANRIIVFGEGYSQERVVKEMKRIFLPTGKIIYDVYGYDMIQALNHFIK
TDDMIFFISLNGDTSTIIDFAKEMRMKGTYMVSITKMISNPLARLCDENLYIQSISIS
VDKQLDYDVTTPYFILIELLYIKYKMYLESEHIPRK"
misc_feature 494982..495743
/locus_tag="CD196_0422"
/note="Transcriptional regulators [Transcription]; Region:
RpiR; COG1737"
/db_xref="CDD:31923"
misc_feature 494982..495185
/locus_tag="CD196_0422"
/note="Helix-turn-helix domain, rpiR family; Region:
HTH_6; pfam01418"
/db_xref="CDD:201784"
misc_feature 495303..495704
/locus_tag="CD196_0422"
/note="RpiR-like protein. RpiR contains a SIS (Sugar
ISomerase) domain, which is found in many phosphosugar
isomerases and phosphosugar binding proteins. In E. coli,
rpiR negatively regulates the expression of rpiB gene.
Both rpiB and rpiA are ribose phosphate...; Region:
SIS_RpiR; cd05013"
/db_xref="CDD:88408"
misc_feature order(495351..495353,495486..495488)
/locus_tag="CD196_0422"
/note="putative active site [active]"
/db_xref="CDD:88408"
gene 495845..496666
/locus_tag="CD196_0423"
/db_xref="GeneID:8463529"
CDS 495845..496666
/locus_tag="CD196_0423"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="YP_003213469.1"
/db_xref="GI:260682184"
/db_xref="GeneID:8463529"
/translation="MKLYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICT
GRSIGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREVAF
SIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDVHKIC
LWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKET
ICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRRNII"
misc_feature 495860..>496111
/locus_tag="CD196_0423"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature 495863..496645
/locus_tag="CD196_0423"
/note="haloacid dehalogenase-like hydrolase; Region:
Hydrolase_3; pfam08282"
/db_xref="CDD:203899"
misc_feature order(495872..495880,495974..495979)
/locus_tag="CD196_0423"
/note="active site"
/db_xref="CDD:119389"
misc_feature 495872..495889
/locus_tag="CD196_0423"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature 495974..495976
/locus_tag="CD196_0423"
/note="motif II; other site"
/db_xref="CDD:119389"
misc_feature <496439..496546
/locus_tag="CD196_0423"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:212620"
gene 496680..498344
/gene="malL"
/locus_tag="CD196_0424"
/db_xref="GeneID:8463530"
CDS 496680..498344
/gene="malL"
/locus_tag="CD196_0424"
/codon_start=1
/transl_table=11
/product="oligo-1,6-glucosidase"
/protein_id="YP_003213470.1"
/db_xref="GI:260682185"
/db_xref="GeneID:8463530"
/translation="MEKKWWQKEIVYQIYPRSFQDSNNDGIGDLQGIISRLDYLKDLG
ITSLWLCPIFKSPMDDNGYDISDYLDIASEFGSMEDLKELIKESKDRGIKIILDLVLN
HTSDEHPWFQEALKNPESPYHDYYIFKKGNDLPNNWRSVFGGSVWEKVENRDEYYFHS
FGKKQPDLNWENPILRSELYQMINTWSQMGVAGFRVDAITFIKKNLSFQSLESDGVDG
LVKCTKTVRNQPGIEKMLYELKENTFKKYDCMTVAEAAGISYDQLGDFIGEDGFFSMV
FDFKHADLDVASGSEWFKRISWTIPDLRKCILDSQMYVQEHGWAANFIENHDQPRATT
KYLLQYERNDDAVKMLGAMYFFLRGTPFIYQGQELGMTNFKRDTINDFNDLSSIDQYY
RSIDEGYSEEEALEFVNLRSRDNARTPFPWADKENAGFSDATPWLKVIENYKDINAQS
QINNSESILEFYKKMIKLRQDSKYSDCLIYGSIEPIDIESDNVIAYRRQLDLVVIDCY
YNFSDKLVEIKTEEKYDIVFQNLDDINLLNKTVSLKPFQAVLLKVR"
misc_feature 496692..498335
/gene="malL"
/locus_tag="CD196_0424"
/note="alpha,alpha-phosphotrehalase; Region:
trehalose_treC; TIGR02403"
/db_xref="CDD:162843"
misc_feature 496698..498092
/gene="malL"
/locus_tag="CD196_0424"
/note="Alpha amylase catalytic domain found in Sucrose
isomerases, oligo-1,6-glucosidase (also called isomaltase;
sucrase-isomaltase; alpha-limit dextrinase), dextran
glucosidase (also called glucan 1,6-alpha-glucosidase),
and related proteins; Region: AmyAc_SI_OligoGlu_DGase;
cd11333"
/db_xref="CDD:200472"
misc_feature order(496740..496742,496746..496748,496752..496754,
496764..496766)
/gene="malL"
/locus_tag="CD196_0424"
/note="Ca binding site [ion binding]; other site"
/db_xref="CDD:200472"
misc_feature order(496857..496859,496866..496868,496977..496979,
496986..496988,497103..497105,497160..497162,
497172..497174,497268..497270,497439..497441,
497916..497918)
/gene="malL"
/locus_tag="CD196_0424"
/note="active site"
/db_xref="CDD:200472"
misc_feature order(497268..497270,497439..497441,497661..497663)
/gene="malL"
/locus_tag="CD196_0424"
/note="catalytic site [active]"
/db_xref="CDD:200472"
gene 498349..500223
/locus_tag="CD196_0425"
/db_xref="GeneID:8466302"
CDS 498349..500223
/locus_tag="CD196_0425"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIABC"
/protein_id="YP_003213471.1"
/db_xref="GI:260682186"
/db_xref="GeneID:8466302"
/translation="MNKYNKIANELIEIIGENNIISITHCATRLRVMVKDREIINDKK
VEKVNEVKGVFFTSGQYQIILGTGIVNKVYAEVEKMGLKTLSKKEQDELVKNNETGFK
KVMRTLADIFVPIIPVIAATGLFLGLKGCLFNDNVLGLFGMSSANIPLYIQTLVSVLT
ETAFAFLPAIIVWSAFKVFGGTPVIGLVIGLMLVSPILPNAYSVADPSNEVEAIMAFG
FIPIVGCQGSVLTAIVTAFIGANLEKWFRKHMPNVLDLIFTPFFVMLITMLVILLGVG
PIMHTIELKMVDIISLLIGLPLGIGGFIIGFTYPLAVITGLHHTYVMIETSLLANTGF
NALITLCAMYGFANIGTCLAFMKKSKNNQVKQTAVGAMLSQLFGISEPVLFGIQLRYN
LKPLIIMCASSGLGAAILSILHIQSNSYGLAVLPSYLMYIYDGYNLITYLLVSIFVVA
FCFIVTCLFGVPKEAINEDEDEELVFNENNENFVSPAKGKIVALENVPDETFSKKMLG
DGFAIDIIDGKIVSPISGKLETVFSSGHAFGIKGTNGEVLIHVGIDTVALNGDGFDIA
VKQGDMVKQGDVLVNVDLKRIHELGKSTLTMVLFPDGKKVNILDINKDVKIGQRICVE
"
misc_feature 498418..499725
/locus_tag="CD196_0425"
/note="PTS system, sucrose-specific IIBC component;
Region: PTS-II-BC-sucr; TIGR01996"
/db_xref="CDD:131051"
misc_feature <498418..498591
/locus_tag="CD196_0425"
/note="PTS_IIB, PTS system, glucose/sucrose specific IIB
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIB_glc; cl00164"
/db_xref="CDD:206873"
misc_feature 498421..498441
/locus_tag="CD196_0425"
/note="active site turn [active]"
/db_xref="CDD:29267"
misc_feature 498424..498426
/locus_tag="CD196_0425"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29267"
misc_feature 498631..499725
/locus_tag="CD196_0425"
/note="Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Carbohydrate
transport and metabolism]; Region: PtsG; COG1263"
/db_xref="CDD:31455"
misc_feature 499801..500220
/locus_tag="CD196_0425"
/note="Phosphotransferase system IIA components
[Carbohydrate transport and metabolism]; Region: NagE;
COG2190"
/db_xref="CDD:32373"
misc_feature order(499843..499854,499864..499869,499933..499938,
499942..499947,499963..499971,499984..499992,
499996..499998,500008..500010,500014..500019,
500053..500055)
/locus_tag="CD196_0425"
/note="HPr interaction site; other site"
/db_xref="CDD:29265"
misc_feature order(499843..499845,499849..499854,499858..499860,
499864..499869,499936..499938,499942..499944,
499954..499956,499990..499992,499996..499998,
500008..500010,500014..500019,500023..500025)
/locus_tag="CD196_0425"
/note="glycerol kinase (GK) interaction site [polypeptide
binding]; other site"
/db_xref="CDD:29265"
misc_feature order(499948..499950,499954..499956,499996..499998,
500002..500004)
/locus_tag="CD196_0425"
/note="active site"
/db_xref="CDD:29265"
misc_feature 499996..499998
/locus_tag="CD196_0425"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29265"
gene complement(500578..502377)
/gene="blaR"
/locus_tag="CD196_0426"
/db_xref="GeneID:8463531"
CDS complement(500578..502377)
/gene="blaR"
/locus_tag="CD196_0426"
/codon_start=1
/transl_table=11
/product="beta-lactamase-inducing penicillin-binding
protein"
/protein_id="YP_003213472.1"
/db_xref="GI:260682187"
/db_xref="GeneID:8463531"
/translation="MYAPFFIRFLLSTLTLSILIVIILLAKKVFKKHISAKYQYNIGF
ILLIMLIIPFVPLKYINLGNVFNYLYTFNQLGSSTNRTSIIKNSPNSIINNSNALNDF
SVSLNQVNFDSLNILLLISWIIGILIMIAITIHCNIKIKNMKKSIQILRDEEIVFIFE
KCKKDIGINKDFILCKSPIINTPITFGYFKPHIILPDKSISKLSLKDIKYILLHELQH
FKNKDILINYIMCFLQILYWFNPLVWYAFKEMRIDREIACDISVLKKLDKDSHIEYGQ
TLINFVDNISRPSNLTLTSDIGGSKKQIKKRLLKIMDFHNESNTLKFKSILIFTLIAL
IVFGNIPKLSIMADINEKYRPTNEQTVYEDLSQYFKGFDGSFVMYDLKSKQYHIYNKE
KSKTRISPNSTYKIYSALLGLENGIITRNNSHIPWDGKHHSNSSWNEDQDLFSAMENS
VNWYFQTLDKKTGLKNIQTYLKQIGYGNYDVSGGISNFWLESSLKISPIEQVELLESF
YTNKFKFEDKNIETVKDSLLISKKDGVSLFGKTGTANINGKDVNGWFIGYVEKNENTY
FFATNIQSKDYSNGSSASKITLSILNDKKIYNP"
misc_feature complement(501445..>501930)
/gene="blaR"
/locus_tag="CD196_0426"
/note="BlaR1 peptidase M56; Region: Peptidase_M56;
cl15829"
/db_xref="CDD:210229"
misc_feature complement(500599..501285)
/gene="blaR"
/locus_tag="CD196_0426"
/note="Beta-lactamase class D [Defense mechanisms];
Region: COG2602"
/db_xref="CDD:32594"
gene complement(502380..502766)
/gene="blaI"
/locus_tag="CD196_0427"
/db_xref="GeneID:8465901"
CDS complement(502380..502766)
/gene="blaI"
/locus_tag="CD196_0427"
/codon_start=1
/transl_table=11
/product="penicillinase repressor"
/protein_id="YP_003213473.1"
/db_xref="GI:260682188"
/db_xref="GeneID:8465901"
/translation="MKKLPHISEAEYQVMKIIWKYAPISTTEVIEKLVETSTWSPKTI
QTMLLRLVKKGALTYEKNSRVFVYTPLVKEEEYVATESSSFLNRFYNGTLNSMVLNFL
ENDKLSEDDIEELREILNKRTTKGDK"
misc_feature complement(502404..502748)
/gene="blaI"
/locus_tag="CD196_0427"
/note="Penicillinase repressor; Region: Pencillinase_R;
pfam03965"
/db_xref="CDD:146546"
gene 502999..503676
/locus_tag="CD196_0428"
/db_xref="GeneID:8465900"
CDS 502999..503676
/locus_tag="CD196_0428"
/codon_start=1
/transl_table=11
/product="iron-sulfur flavoprotein"
/protein_id="YP_003213474.1"
/db_xref="GI:260682189"
/db_xref="GeneID:8465900"
/translation="MIITVINGSPRKNGATSKVLTYLYKDIERLIPDVKINYFDLSEV
NPSYCIGCLNCYKMGKCINQNDKVEYIHDIITKSDGVIFGSPTYGSSVTGLFKVFTDR
AHMMLERLLYRKPCIAVTTYENARGSKAISFIKSMVLDSGGYVCGSLSIKTGFNQNPI
TEKVESKIQKVSKKFIYCIEEKKNPPVLSQIYNFIAINAVLKPMAFKDIEQYKGIIDR
WEEQGII"
misc_feature 502999..>503400
/locus_tag="CD196_0428"
/note="Multimeric flavodoxin WrbA [General function
prediction only]; Region: WrbA; COG0655"
/db_xref="CDD:31000"
gene 503688..504113
/locus_tag="CD196_0429"
/db_xref="GeneID:8463532"
CDS 503688..504113
/locus_tag="CD196_0429"
/codon_start=1
/transl_table=11
/product="MarR family transcriptional regulator"
/protein_id="YP_003213475.1"
/db_xref="GI:260682190"
/db_xref="GeneID:8463532"
/translation="MKDFEKLYEATTKLVSTSLKVKDDLKKMFKQNGYDITTDHYALL
RFLWEQDGISQIDLCEKSCKDKSNTTRILDVMKNKGLIVRKVDVKDRRKFQIFLTDLG
RELEEPLNEIASIYATETFKSISDEELPLFTDILDRIGK"
misc_feature 503787..504074
/locus_tag="CD196_0429"
/note="helix_turn_helix multiple antibiotic resistance
protein; Region: HTH_MARR; smart00347"
/db_xref="CDD:197670"
misc_feature 503787..503963
/locus_tag="CD196_0429"
/note="MarR family; Region: MarR_2; pfam12802"
/db_xref="CDD:205082"
gene 504181..504960
/locus_tag="CD196_0430"
/db_xref="GeneID:8463533"
CDS 504181..504960
/locus_tag="CD196_0430"
/codon_start=1
/transl_table=11
/product="iron-sulfur protein"
/protein_id="YP_003213476.1"
/db_xref="GI:260682191"
/db_xref="GeneID:8463533"
/translation="MNSKIYYFSGTGNSLVVSKILKETLNGSKEVIPLAIHRKENNID
INEDILVIVFPVYFADVPDIIKSFVEKLNFNINTHIYAIATCNGVAGHSLFTIDKLLK
KRGKKLSAGFLINMPGNALITPSDVEEERLKNQTNRVAEIAKCINNLEIGNIEGKNNL
KSHIDSVVLRLVGKNMQIATTKFFAENKCNGCGTCKRVCPVENISIVDKKPKWGNECE
RCLACFHWCPKEAINVKKSFLTNRKKYHHPDITVKDIFLDK"
misc_feature 504181..504606
/locus_tag="CD196_0430"
/note="NADPH-dependent FMN reductase; Region: FMN_red;
cl00438"
/db_xref="CDD:212217"
misc_feature 504736..504795
/locus_tag="CD196_0430"
/note="4Fe-4S binding domain; Region: Fer4; cl02805"
/db_xref="CDD:207738"
misc_feature 504742..504876
/locus_tag="CD196_0430"
/note="4Fe-4S dicluster domain; Region: Fer4_9; pfam13187"
/db_xref="CDD:205368"
gene complement(505210..505953)
/locus_tag="CD196_0431"
/db_xref="GeneID:8463534"
CDS complement(505210..505953)
/locus_tag="CD196_0431"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213477.1"
/db_xref="GI:260682192"
/db_xref="GeneID:8463534"
/translation="MSCFICYYTFKYATIFSKLCALKLAFYSNLKLKTKETRYMKINI
KSKLSEFIKQNNLFDDNRIISYLPNITIETDKIKTIMINEVVPTNTNDDFYSVDKDAD
YLKTTIPLFDSAGIEVSNINDILDMGIYITNAVKLPKSEYTITRDTIKLHMPILEEEI
KLFKNLEVVMLMGDVAKKSFNMITKKHIKKNVIPSISTYKLRNNELYYDNLRVFPSYI
MTGGNILIEKSKFEMASEDIKKMFEIING"
misc_feature complement(505357..>505572)
/locus_tag="CD196_0431"
/note="Uracil DNA glycosylase superfamily; Region: UDG;
pfam03167"
/db_xref="CDD:202563"
gene complement(505979..506236)
/locus_tag="CD196_0432"
/db_xref="GeneID:8463535"
CDS complement(505979..506236)
/locus_tag="CD196_0432"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213478.1"
/db_xref="GI:260682193"
/db_xref="GeneID:8463535"
/translation="MILNRTELFRGYSLNRFNEICNILSVNKIKYKYKVKNNAYSKKP
FSNEITLGNLGQKEDFSYEYLIYVHKDDYEQAESLINSKLR"
gene 506562..507074
/locus_tag="CD196_0433"
/db_xref="GeneID:8463536"
CDS 506562..507074
/locus_tag="CD196_0433"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003213479.1"
/db_xref="GI:260682194"
/db_xref="GeneID:8463536"
/translation="MKKISQEKISTHIQEVPQEKIEQWKSLYEKYKSILKVNSKSVLE
IIEFLKRKYVIVEETSEEFKHVVINNIKLNKPFSQKISSDKELKPIVFTIPNEGNAKK
LYDTQEETYSGCKIIVGMEFETGCVFVEGSDELNDEITSFKGLDKYDISNYYLVANYI
RCLKKYKLID"
gene 507260..508033
/gene="spaF"
/locus_tag="CD196_0434"
/db_xref="GeneID:8463537"
CDS 507260..508033
/gene="spaF"
/locus_tag="CD196_0434"
/codon_start=1
/transl_table=11
/product="lantibiotic ABC transporter ATP-binding protein"
/protein_id="YP_003213480.1"
/db_xref="GI:260682195"
/db_xref="GeneID:8463537"
/translation="MLFFHVSILLVIDLRYYKKGEINMKDLILETKNLSKRYGEQMAV
NNVSLQIERNSIYGLLGPNGAGKSTTLKMLVGLLRPTDGRIIFDRKPWKRESLAKIGS
LIESPALYGNLTAEENLLVHTKILGIPKDKIYEVLEIVNLKNTGKKRASQFSMGMKQR
LGIAIALLSDPELLILDEPTNGLDPFGIQELRELIASFPKKGITVILSSHILSEVAQV
