LOCUS NC_015583 1161602 bp DNA circular BCT 24-DEC-2012
DEFINITION Novosphingobium sp. PP1Y plasmid Mpl, complete sequence.
ACCESSION NC_015583
VERSION NC_015583.1 GI:334144765
DBLINK Project: 67383
BioProject: PRJNA67383
KEYWORDS complete genome; complete replicon.
SOURCE Novosphingobium sp. PP1Y
ORGANISM Novosphingobium sp. PP1Y
Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
Sphingomonadaceae; Novosphingobium.
REFERENCE 1 (bases 1 to 1161602)
AUTHORS D'Argenio,V., Petrillo,M., Cantiello,P., Naso,B., Cozzuto,L.,
Notomista,E., Paolella,G., Di Donato,A. and Salvatore,F.
TITLE De Novo Sequencing and Assembly of the Whole Genome of
Novosphingobium sp. Strain PP1Y
JOURNAL J. Bacteriol. 193 (16), 4296 (2011)
PUBMED 21685292
REFERENCE 2 (bases 1 to 1161602)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2011) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1161602)
AUTHORS Petrillo,M.
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2011) to the INSDC. Bioinformatic, Ceinge
Biotecnologie Avanzate, Via Gaetano Salvatore, 486 Naples, 80145,
ITALY
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to FR856861.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1161602
/organism="Novosphingobium sp. PP1Y"
/mol_type="genomic DNA"
/strain="PP1Y"
/db_xref="taxon:702113"
/plasmid="Mpl"
gene 162..710
/locus_tag="PP1Y_Mpl4"
/db_xref="GeneID:10718788"
CDS 162..710
/locus_tag="PP1Y_Mpl4"
/inference="similar to AA sequence:UniProt:P55616"
/note="KEGG: rhi:NGR_b10010"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004537975.1"
/db_xref="GI:334144766"
/db_xref="GeneID:10718788"
/translation="MAAAIKLREDFSAGQVRAAARNSKDAAQVRRLLALATILEGGSR
SDAARIGGVTLQIVRDWVLRFNAQGPDGLVTRKAPGPDTILDDSHRRALEEIIEAGPI
PAVHGVVRWRIIDLVQWLWDEFRLSISKQALGHELRTMGYRKLSARPRHRGQRPEDIA
AFKKPSPPVWRKSAKACPKARP"
misc_feature 249..392
/locus_tag="PP1Y_Mpl4"
/note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
/db_xref="CDD:205696"
misc_feature 252..584
/locus_tag="PP1Y_Mpl4"
/note="Winged helix-turn helix; Region: HTH_29; pfam13551"
/db_xref="CDD:205729"
misc_feature 489..653
/locus_tag="PP1Y_Mpl4"
/note="Winged helix-turn helix; Region: HTH_33; pfam13592"
/db_xref="CDD:205770"
gene 875..1222
/locus_tag="PP1Y_Mpl14"
/db_xref="GeneID:10718238"
CDS 875..1222
/locus_tag="PP1Y_Mpl14"
/inference="protein motif:COG:COG3335"
/inference="similar to AA sequence:UniProt:A3X239"
/note="KEGG: avi:Avi_8018"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004537976.1"
/db_xref="GI:334144767"
/db_xref="GeneID:10718238"
/translation="MPRCNSEAMDMHLAEISSQVAPGAHAVILLDQAGWHLSGTLAVP
PNITLLPLPPKCPELNPVENVWQFMRENWLSNRIFTSYDNVVDHCCHAWNKLTDQPWR
IMSIGLRKWAHGF"
misc_feature <878..1129
/locus_tag="PP1Y_Mpl14"
/note="DDE superfamily endonuclease; Region: DDE_3;
pfam13358"
/db_xref="CDD:205537"
misc_feature <953..1201
/locus_tag="PP1Y_Mpl14"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3335"
/db_xref="CDD:33144"
gene 1813..2937
/locus_tag="PP1Y_Mpl25"
/db_xref="GeneID:10717993"
CDS 1813..2937
/locus_tag="PP1Y_Mpl25"
/inference="protein motif:COG:COG2828"
/inference="similar to AA sequence:UniProt:B0T6L4"
/note="KEGG: cak:Caul_0497"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004537977.1"
/db_xref="GI:334144768"
/db_xref="GeneID:10717993"
/translation="MPKKVPAVFMRGGAGRGIFFHERDIPAPGPERDHIFLSVLGSPD
PFGRQLNGMGGGNSSLSKVVIVRTAADTEVDVEYLHGQVSLSSAIVDYSANCGNLSGA
VGPFAVSEGLVALKEGITVVRMRNLNTGDIVHAHVPVEHGDYPNSGRYAIPGVGGANA
KVALEYLMPGGGCILATNSARETISGVDVTLGLSPLATVWTHGPQINFPTSLSPQEID
SDLRIMSSLDHLRRLGAVRMRLADSLTNANLASPKIGIVSPPTDYVALDGKSISADDF
DISARVLSMEMVHKSIPLACAMNLAAATCIEGSVPFEMAKRSAPGEFRIGTPSGVLNI
RVVVKPNATGFPYLARVGVDTSARRLMEGYVFYDPAETSA"
misc_feature 1819..2910
/locus_tag="PP1Y_Mpl25"
/note="PrpF protein; Region: PrpF; pfam04303"
/db_xref="CDD:202964"
gene complement(3087..4796)
/locus_tag="PP1Y_Mpl37"
/db_xref="GeneID:10718093"
CDS complement(3087..4796)
/locus_tag="PP1Y_Mpl37"
/inference="protein motif:COG:COG2936"
/inference="similar to AA sequence:UniProt:B4B371"
/note="KEGG: slo:Shew_2869"
/codon_start=1
/transl_table=11
/product="peptidase S15"
/protein_id="YP_004537978.1"
/db_xref="GI:334144769"
/db_xref="GeneID:10718093"
/translation="MQLAAQAANAQEPVLAPAPVPSTFGNYAPAVQYADIVSSSSYVR
MRDGVRLAVRVDRPGKDGKTVDGRFPVIWHHTLSISQQTADGAGGRVSDYRRVQELVR
YGYVVVQVARRGNGQSLGSMRGYHDRNEAQDAFDMVDWLSRQDWSDGKVGVYGCSNTG
DAAMHTLTMRPPALKAVWAGCFSWNKYDAFRRGGIFAQWGTGPTRSIEQDMAVSPVDG
DEDKTLLAQAAREHQESTRLFDMWKQLPYRDSFSAAVGSRFWAEGSISSYAKQMLLAD
VPVYIQGGWFDELRDQGMIARMNLPGSRLVIGPWKHCDNNDFALLQEMHRFYDRYLKG
IDTGVGAQAPIHYFTMNAPEGRQWRSSAAWPVAGVKPATYHFAKGKLATATPARTAVS
FKADFSVKCPDAGSGSQVQPCHVDGAGPAFATAPVEQDTEVTGDPEVSMWVKLDGPDA
NVFAYLEDVAPDGTVRVVTEGRLKASLRKLDKAPWQLPAGVPWHRSYAEDAVPVPAGE
AVQLQFAMMPTSWVFKKGHRIQVSVTGADHRERVRTPETSPVITVLGGKGQDSQVILP
IVP"
misc_feature complement(3090..4700)
/locus_tag="PP1Y_Mpl37"
/note="Predicted acyl esterases [General function
prediction only]; Region: COG2936"
/db_xref="CDD:32759"
misc_feature complement(<4227..4511)
/locus_tag="PP1Y_Mpl37"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature complement(3105..3770)
/locus_tag="PP1Y_Mpl37"
/note="X-Pro dipeptidyl-peptidase C-terminal non-catalytic
domain; Region: PepX_C; smart00939"
/db_xref="CDD:198007"
gene complement(4879..6318)
/locus_tag="PP1Y_Mpl49"
/db_xref="GeneID:10718213"
CDS complement(4879..6318)
/locus_tag="PP1Y_Mpl49"
/inference="similar to AA sequence:UniProt:A1TNV1"
/note="KEGG: aav:Aave_2057"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004537979.1"
/db_xref="GI:334144770"
/db_xref="GeneID:10718213"
/translation="MTQSSRIFGASDVPGATLSIDLEAYGYVEEEYFLAGTADSYRRA
KKGAVPDKTGIAYTTRIIVRRPADRSRFSGVVHFEPIHPSQGGTTHWLTTGRYMMGQG
DVYVAAAISDDRPSRRISAEGPAPTAQSQVTKWFDPVRYAPLSWPQEDGIAYDVMASI
GKLLRSEREDNPLKGWPVKAMLVGGWSFTGSIQRTFINEGFHDRARLPGGKPVFDGYL
IGISSRWNGGGYVPLNSEEPQTANADPRRTLRTIDVPVIEFLSEFEAATGPGPQVPDR
EGKAGGHRLYEMGGTIHSSSMTDPRQPRSERPNLAQLAAKGYPLDAVRGETTDEPCSA
PLSDVDHPAYIRASLDALRHWVLDGVEPPHIAPLVRDGDKIARDAAGNPLGGVRAAEF
VVPLAGYGPYKGTDKPGCFPAKGRPIFVRNDLPHEDLVSLYTSRAEYLREFDAAVDAL
VSARWLLESDARDLKMRARSRSLTAFEAP"
gene complement(6417..9173)
/locus_tag="PP1Y_Mpl64"
/db_xref="GeneID:10718314"
CDS complement(6417..9173)
/locus_tag="PP1Y_Mpl64"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B0T9D4"
/note="KEGG: cak:Caul_4602"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004537980.1"
/db_xref="GI:334144771"
/db_xref="GeneID:10718314"
/translation="MHRGARYVQTRAQLLTGLSALALGLFPLAAHAQDATKGDTAENA
DVAGSEIVVTGTSIRGVAPVGSSLIAIGSEQLENSPSVSTADILKEMPQIFNYGVSDA
SRTGAGGAGNIVYGNAINLRGVSPYATLTLINGRRAVPQGTTGATVDPSTIPALALER
IEVIADGASAIYGSDAVTGVANLIMKRGYDGLKVNTRYGMADDYHNFQIGGIAGHTWD
SGQVTLTFQHLFKSSLSGMDRDFYAADQTSRGGADYREVQCAPGNIVAGGQNYAIPEG
GATPTNLIAGTQNRCDNVKLGDLLPQQENNAIALTFDQEVTDGIKIFADAYANRRDGL
RMSPPATTNLTVPSSNYYFVAPAGAVLSPCPASAKAPAGALCETVQYSFANDGRQNTS
KIVSKTIQGTLGLDAELFSDFHLNAYGTYGYNHDHVYSRGGNINNANIVAALASSDPA
TAFNPFATGVNDPAVLSSIFDNLTDTDGRSKFTNFKAAVDGTLFTLPGGPVKIAVGAE
YFKLKLRTGQIRGAAGAQTGTDQRLGRNVKSAYGELLIPIFGPDNAMPGFQSLTLDIA
GRIDKYSDVGSTKNPKFGFNWEPINDFKIHGSYGKSFRAPELTRLVSAGGSQLFIQSY
YDPTASNGAGATILGVALSGGNLDLQPETSRTYSLGFDYTPAWKPGARLGINYFDLVY
KGQINGFLSNRNVLRQEDQFTSIILRGAAAQARIADLVSQGYRVNGGTTQTALDSVVF
VDGRPSNQGTTITRGIDFNLSVPFDVGADGKVRVTLGGIRFFTYKSALTPTSDLIEQV
NNIDYPLKLRMRGSLDYSNDWLSAGVTVNYANGYNNTLFSPAERIKAYTTIDAQLSFD
LGKTGIYGTEGIRLGIDVQNLFDQDPPYVDIAPIGNGGGGGFDAQVANPIGRLVSFSL
SKEF"
misc_feature complement(6420..8975)
/locus_tag="PP1Y_Mpl64"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(8619..8645,8679..8711,8757..8759,
8763..8783,8802..8816,8835..8837,8871..8873,8892..8918,
8946..8975))
/locus_tag="PP1Y_Mpl64"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(7740..7742,7821..7823))
/locus_tag="PP1Y_Mpl64"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 9555..9977
/locus_tag="PP1Y_Mpl91"
/db_xref="GeneID:10718458"
CDS 9555..9977
/locus_tag="PP1Y_Mpl91"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004537981.1"
/db_xref="GI:334144772"
/db_xref="GeneID:10718458"
/translation="MLYLRKAPEGHGKRRDRHMGIAIRYSIFAASILSATVAQADGIA
PRKSNPHEDAAQVGVHMRAARRIAEEDLAAHFRWRCLTSPLDPQIVAGVQHEGLVPPA
REFDNLYSVGQNAVSSHVIDTGAGRFCRKLWPAVRLAL"
gene complement(9987..10685)
/locus_tag="PP1Y_Mpl95"
/db_xref="GeneID:10718706"
CDS complement(9987..10685)
/locus_tag="PP1Y_Mpl95"
/inference="protein motif:COG:COG3316"
/inference="similar to AA sequence:UniProt:Q11AJ6"
/note="KEGG: pol:Bpro_5309"
/codon_start=1
/transl_table=11
/product="putative transposase"
/protein_id="YP_004537982.1"
/db_xref="GI:334144773"
/db_xref="GeneID:10718706"
/translation="MLFKGRHFEGSLIMLCVRWYLAYGLSLRDLEEMIAERGVAVDHS
TIHRWVLHYTPQLLDAFNARKRSVTSKWNLDETYIKVKGEWMYLYRAIDKSGATVDFL
FSNTRNLRDAKRFFRRAYKRHGLPVQLTIDGSQTNLEAARTCHAEVRMRTRSKAEPLK
VRQSQYMNNRIEQDHRRIKRRIRPMLGFKSQATAGVILEGIELIHMIRKGQMIPANDA
RNPSFADQFDSLAA"
misc_feature complement(10053..10685)
/locus_tag="PP1Y_Mpl95"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3316"
/db_xref="CDD:33125"
misc_feature complement(10140..10475)
/locus_tag="PP1Y_Mpl95"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
gene complement(10974..11987)
/locus_tag="PP1Y_Mpl103"
/db_xref="GeneID:10718743"
CDS complement(10974..11987)
/locus_tag="PP1Y_Mpl103"
/inference="protein motif:COG:COG0491"
/inference="similar to AA sequence:UniProt:A3JY79"
/note="KEGG: vap:Vapar_5001"
/codon_start=1
/transl_table=11
/product="beta-lactamase domain-containing protein"
/protein_id="YP_004537983.1"
/db_xref="GI:334144774"
/db_xref="GeneID:10718743"
/translation="MLPALAFAWSTVSAVAQEMKALPPDAIAHIEKARHLIGRDLPQT
TVGEFFNLLRNSKKTDPKILPANPTTAGPLGKTQYEAVGPVKVFDGVYVVGNAFVDVW
IFVTKDGIIQYDAMNNEDDAKNIIEPAYAKLGLDPRNLKYIIISHGHGDHFGGAKYFQ
QKYGTHVLSSAADWDLMYRNVRSNAPPPARDMVVTDGQKLSLGGQTMTLYVTPGHTPG
PVSLVVPVTDRGQKHVMAAFGGFGLPLNVEPSSAGPGLRVYGKEMRRFQKIAAAAGAD
GIISTHPGFDGTEDHVRNLIGGTAKKRNPYVVGNAAVARYWDAVDQIRLSMISIVDHL
PAP"
misc_feature complement(<11313..11687)
/locus_tag="PP1Y_Mpl103"
/note="Zn-dependent hydrolases, including glyoxylases
[General function prediction only]; Region: GloB; COG0491"
/db_xref="CDD:30837"
misc_feature complement(<11313..11687)
/locus_tag="PP1Y_Mpl103"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; smart00849"
/db_xref="CDD:197917"
gene complement(12157..13476)
/locus_tag="PP1Y_Mpl117"
/db_xref="GeneID:10717840"
CDS complement(12157..13476)
/locus_tag="PP1Y_Mpl117"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:B8IEH9"
/note="KEGG: met:M446_3264"
/codon_start=1
/transl_table=11
/product="major facilitator transporter"
/protein_id="YP_004537984.1"
/db_xref="GI:334144775"
/db_xref="GeneID:10717840"
/translation="MLPRSKLVDIESSTIRKVMWRLLPLLFASYFFAYINRVNIGFAL
SMQGDLGLSSTIFGLGAGLFFISYFVCEIPSNLMLVRVGARRWIARIMITWGALSMCM
ALVNGVSSFIALRLLLGAAEAGFFPGVILYITYWFPSYVRARIMAWFMIAIPLSLAIA
GPISNLILQNMGGVLGLADWRWLFILEGLPTVLLAFVVLITLPDHPGKATWLEPEQKE
WLTGALAAERKRIETAHSSMGLLQALADRRTIALAFIYFANTASSYGVSYFLPQIIKG
MGSSATDANYLSSIPFIIGALGIFVFGVVSDRLRQYRLQLTAFALGMTALGMAGAGLV
GPSYVAIVLIALATAGTYGGKVPFWPLPSMFLTGSAAAGGIAMINSIGNLGGFVGPYA
IGWVKQTTGSYSWGLGLLAIIALAGLTVALLLQTPSHIDGEQGQDAR"
misc_feature complement(12265..13434)
/locus_tag="PP1Y_Mpl117"
/note="4-hydroxyphenylacetate permease; Region: HpaX;
TIGR02332"
/db_xref="CDD:131385"
misc_feature complement(12274..13410)
/locus_tag="PP1Y_Mpl117"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(12319..12321,12328..12333,12340..12345,
12352..12357,12388..12390,12397..12402,12412..12414,
12421..12426,12433..12435,12580..12582,12592..12594,
12601..12603,12613..12615,12625..12627,12664..12666,
12673..12678,12685..12690,12697..12699,13006..13008,
13024..13029,13036..13041,13075..13077,13084..13089,
13096..13101,13108..13113,13249..13254,13258..13263,
13273..13275,13282..13287,13294..13296,13345..13347,
13351..13359,13366..13368))
/locus_tag="PP1Y_Mpl117"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(13544..14431)
/locus_tag="PP1Y_Mpl133"
/db_xref="GeneID:10717970"
CDS complement(13544..14431)
/locus_tag="PP1Y_Mpl133"
/EC_number="1.1.1.60"
/inference="protein motif:COG:COG2084"
/inference="similar to AA sequence:UniProt:B8FR93"
/note="assigned by KAAS to KEGG Orthology:K00042
2-hydroxy-3-oxopropionate reductase"
/codon_start=1
/transl_table=11
/product="2-hydroxy-3-oxopropionate reductase"
/protein_id="YP_004537985.1"
/db_xref="GI:334144776"
/db_xref="GeneID:10717970"
/translation="MKLGVIGLGTMGRPIAHHLYRPTDTLTVSSQNTEVFEEFTTKGI
AASTDVTICRDSDIIFICVPDGEIVKDILFGSGGLAATVRPGTLIVDLSTVVYQDALE
VAARLADMQINFLDAPVSGMEKRANEGTLTIMAGGEKDLFEKAKPYLERIGTKVLHMG
KVGNGQLMKMTNQLVYDTNIAALAEVVPMAVKIGLDPVQIVEVINTGTGRSYASEYFL
PHILDEIFDTSYTLKGAYKDIISAHKISADHNIPMPVISAMTAVYQTALREGHGSKDK
GAMILVFEKLLGIKVRRDK"
misc_feature complement(13580..14431)
/locus_tag="PP1Y_Mpl133"
/note="3-hydroxyisobutyrate dehydrogenase and related
beta-hydroxyacid dehydrogenases [Lipid metabolism];
Region: MmsB; COG2084"
/db_xref="CDD:32267"
misc_feature complement(<13922..14431)
/locus_tag="PP1Y_Mpl133"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene complement(14558..14680)
/locus_tag="PP1Y_Mpl140"
/db_xref="GeneID:10717984"
CDS complement(14558..14680)
/locus_tag="PP1Y_Mpl140"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004537986.1"
/db_xref="GI:334144777"
/db_xref="GeneID:10717984"
/translation="MEMEVADGDAVTLRNKPGPTGERFPHLRSFLTARIDNFIG"
gene complement(14903..17650)
/locus_tag="PP1Y_Mpl145"
/db_xref="GeneID:10717994"
CDS complement(14903..17650)
/locus_tag="PP1Y_Mpl145"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:A5V8N4"
/note="KEGG: swi:Swit_2291"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004537987.1"
/db_xref="GI:334144778"
/db_xref="GeneID:10717994"
/translation="MKSADTDQESAPIEPVELIVTGSRIVRNGFTAPTPTTVFSQEDI
RATALPNIADVANQLPQLQGSATPSTGNGGTSQGASGQNILNLRGLGGQRALVLIDGR
RVVPTVASGVTDANNIPGQAVTRIDVVTGGASAAYGSDAVAGVVNFVLDKEFTGLKGE
MNGGISSRNDNASRGLALTYGGRFLNNRLHVLLSGEWQKTDGIDHLDTSKRSWYTGTR
LLPNSAFVSRTATPNVPALLTFNNVNHSLAAPGGLITSGPLKGTQFGVGGQLLPFSYG
SYIAGSLMAGGQFEDSGTESQLVSQVDFANFLGRADYEINDRISLFAQFLYGYSRGRG
KGANQRKFGTLTIQKTNAYLPQSIVDAMTLNNVTSFGFGTNVEDIGGAQQDNKRRSKQ
ATIGLNGSLGNNWKWDVYYQFGRSDLDIKLNNVINKSNYTRAIDAVFASNGGIVCRNV
ATFPNCVPLNPFGVGVASPQALAYITGTAATRMQLTQQVAEASLSGDIADLWAGPISA
TVGAGWRKEDVATSYVDNVSLASGWFAGNYKPTNGSYNVKELFGEAVVPLAKDFVLAH
SLELNAAVRRTDYSSSGIVTTWKVGVNYRPIPDVLIRATRSRDIRAPGLNDLYSGGSV
NTAPILDPRYSNASVSIPNSNVGNPNLKPEGASSWGVGAVYQPSWLRGFSASVDYYNI
KVRDAIASPGTQNIVNLCEAGVRPDYCALVTRGTGVVGGVLRNDAIVSTITGPVNLAS
LELKGYDIELGYRKNLADWVPGWDANLSLRALGTRVLKNVTDDGVGSRHDAAGENRGS
TPRWRWNVSALYNQNRVTLSATWRLISSGVLSTSFYDNAAGPLTVDNNYVAGASYVDA
GINYKIPTRGGLEVYFRVSNLFDKSPPIVASQNFLAPSFNPSLFDVVGRYFRAGVRFK
I"
misc_feature complement(15014..17557)
/locus_tag="PP1Y_Mpl145"
/note="TonB-dependent receptor; Region: TonB-Xanth-Caul;
TIGR01782"
/db_xref="CDD:162534"
misc_feature complement(<16313..17548)
/locus_tag="PP1Y_Mpl145"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
misc_feature complement(14909..>16051)
/locus_tag="PP1Y_Mpl145"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene complement(17964..18851)
/locus_tag="PP1Y_Mpl173"
/db_xref="GeneID:10717998"
CDS complement(17964..18851)
/locus_tag="PP1Y_Mpl173"
/inference="protein motif:COG:COG0583"
/inference="similar to AA sequence:UniProt:B0T3V7"
/note="KEGG: cak:Caul_3294"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_004537988.1"
/db_xref="GI:334144779"
/db_xref="GeneID:10717998"
/translation="MIGLSLRQLSAFVTVARLGSFTRAAAVLNISQPALTVQIQRVEE
QVGTKLLDRSTHQVTLTPAGRDLFPVLTRLLEELELALAPQRADGSLRGKVRVGCFPS
VAAYFLPQRIADYRRLHTDVTFLIHDTTAQKVLTLIRQEEVDFGIVDGANDANDLECT
PLIVDHMHAIFPRHHPLEGVAELTIEALAEYPLILLDPRSHVRKIVDGVFLQMGRLTE
PSVEVTYMHSAIELARAGLGIAILPALCVPLEDSQLAARKVDHPAFVRRMDLVKKRGA
SKSPAASNFYEFLLSNGIV"
misc_feature complement(17979..18842)
/locus_tag="PP1Y_Mpl173"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(18657..18836)
/locus_tag="PP1Y_Mpl173"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(17985..18572)
/locus_tag="PP1Y_Mpl173"
/note="TThe C-terminal substrate binding domain of an
uncharacterized LysR-type transcriptional regulator,
contains the type 2 periplasmic binding fold; Region:
PBP2_LTTR_like_4; cd08440"
/db_xref="CDD:176131"
misc_feature complement(order(18147..18152,18156..18161,18177..18194,
18468..18488,18492..18494,18504..18506,18513..18518,
18522..18527))
/locus_tag="PP1Y_Mpl173"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176131"
gene 18990..20708
/locus_tag="PP1Y_Mpl185"
/db_xref="GeneID:10718019"
CDS 18990..20708
/locus_tag="PP1Y_Mpl185"
/EC_number="4.2.1.9"
/inference="protein motif:COG:COG0129"
/inference="similar to AA sequence:UniProt:A1WDX3"
/note="assigned by KAAS to KEGG Orthology:K01687
dihydroxy-acid dehydratase"
/codon_start=1
/transl_table=11
/product="dihydroxy-acid dehydratase"
/protein_id="YP_004537989.1"
/db_xref="GI:334144780"
/db_xref="GeneID:10718019"
/translation="MAEEDKSHEGLTKGLTNYGDMDFARYLRLSFIKSTGLSTEMLNK
PVIGIARTGSDFNNCHRMMPELVQAVKRGVLAAGGLPLEFPTISLGEVFLSPTSLVYR
NLMAMDTEEMIRAQPMDAVVLIGGCDKTVPAQLMGAVSANVPAIQLVTGPMMTGRWRG
ERLGACTDCRRFWARYRAGEIDAETIAEVEGNLATTAGTCAVMGTASTMAAIGEALGI
MLPGTAAIPAVHADRLRAAEASGKVAMQLALGAVTPDKIITRDSVENALITLLAIGGS
TNAIIHLTAIAGRAGVDIDLARLNALSDQTPVLVDLKPTGPFYMEDLHAAGGIGAILR
ELKPLLHLDCLTVTGETLGQRLAHPHNYVDRAVIKAFEEPLQPQGGLVALFGNLAPRG
AILKRAAADPAMFEKEGRAVVFSSLEDLSRRIDDPDLDVTADDFIVLQNAGPNSASGM
PEAGYLPIPGKLARAGVKDMVRISDARMSGTAYGTIVLHVAPDAASGGPLAAVRNGDR
IRISVRDKAIELLVPADEIARRIAESPPEALKVPRGYARLYQQEVLQADQGCDFNFLR
KSPIER"
misc_feature 19017..20690
/locus_tag="PP1Y_Mpl185"
/note="dihydroxy-acid dehydratase; Validated; Region:
PRK06131"
/db_xref="CDD:180416"
gene 20806..21591
/locus_tag="PP1Y_Mpl204"
/db_xref="GeneID:10718030"
CDS 20806..21591
/locus_tag="PP1Y_Mpl204"
/EC_number="1.1.1.100"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:Q11AM7"
/note="assigned by KAAS to KEGG Orthology:K00059
3-oxoacyl-[acyl-carrier protein] reductase"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-[acyl-carrier protein] reductase"
/protein_id="YP_004537990.1"
/db_xref="GI:334144781"
/db_xref="GeneID:10718030"
/translation="MDLGLNGKVALVMGASSGLGVATARALAAEGAKVALAARRVDVL
ARLSKEIEAAGGSALVVEWDLAEPDRTEPALDEIEAQLGPIDILVANTGGPPPRGAEG
IPHDLWLEQFRVMVLSIVGIANRLVPGMRRRGWGRIVTFASSGVIVPIPNLALSNALR
LSLVGWSKTLAAEVAADGVTVNVLAPGRINTDRVRSLDNSRAIREGKDVSAVVEASHA
AIPARRYGTPEEFAAVATFLAGVPASYVTGSIVRVDGGLIPVI"
misc_feature 20815..21579
/locus_tag="PP1Y_Mpl204"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature 20824..21582
/locus_tag="PP1Y_Mpl204"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(20845..20847,20851..20856,20860..20862,20917..20925,
21076..21084,21226..21234,21271..21273,21283..21285,
21361..21372)
/locus_tag="PP1Y_Mpl204"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(21148..21150,21232..21234,21271..21273,21283..21285)
/locus_tag="PP1Y_Mpl204"
/note="active site"
/db_xref="CDD:187535"
gene complement(21616..22509)
/locus_tag="PP1Y_Mpl209"
/db_xref="GeneID:10718047"
CDS complement(21616..22509)
/locus_tag="PP1Y_Mpl209"
/inference="protein motif:COG:COG0583"
/inference="similar to AA sequence:UniProt:A7IDN9"
/note="KEGG: nar:Saro_0854"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_004537991.1"
/db_xref="GI:334144782"
/db_xref="GeneID:10718047"
/translation="MINWEDMRVFIALARHGSFSAAGRKLGLDATTVSRRARRLESNL
QSMLFFSNGGSLQLTAAGRRLSEAGIAVEMAMEMAEEDRVPGAAAGTVRMSCPDGLGG
YILAPNLPSFINQRKGLRVEFVATPGYLSATTREVDIAITSSPPEPRKLRVDALSDYE
IGLYASESYLGRCGVPQTAAELRGHECIGYVDDLIYTPELRFLDRFETGLKLHLACSS
LRIQLVLAANGGGIGAFPCFMADDSRDLVRILPERTSTRTFWIAVHEDLYETARMRAV
ISWLYRLVEQKREILVPSQYR"
misc_feature complement(21643..22506)
/locus_tag="PP1Y_Mpl209"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(22321..22500)
/locus_tag="PP1Y_Mpl209"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(21670..22242)
/locus_tag="PP1Y_Mpl209"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature complement(order(21826..21831,21835..21840,21856..21873,
22135..22155,22159..22161,22171..22173,22180..22185,
22189..22194))
/locus_tag="PP1Y_Mpl209"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 22734..23438
/locus_tag="PP1Y_Mpl222"
/db_xref="GeneID:10718052"
CDS 22734..23438
/locus_tag="PP1Y_Mpl222"
/inference="protein motif:COG:COG0725"
/inference="similar to AA sequence:UniProt:Q89MM2"
/note="assigned by KAAS to KEGG Orthology:K02020 molybdate
transport system substrate-binding protein"
/codon_start=1
/transl_table=11
/product="molybdate transport system substrate-binding
protein"
/protein_id="YP_004537992.1"
/db_xref="GI:334144783"
/db_xref="GeneID:10718052"
/translation="MTSPALVAPIRVISTFALANAMNQLVELNQARTGESAVLEFGPT
SQLLESIRTGRGGDVAILTADGIEQLISKGVLLPGSRTDIALSSVGVAVRAGAPWPPI
DTVAAFVATLLAARSVAYSRSGASGIYFAELLQRLGISSEINAKATIIEQGFTAELLV
DDRADIAIQQVSELRRVLGIDVIGQLPREIACDTCFSAGLFRESRNPAAAASFCQTLV
SYASWPILLKSGLEPF"
misc_feature 22761..23429
/locus_tag="PP1Y_Mpl222"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_11; pfam13531"
/db_xref="CDD:205709"
misc_feature 22785..>22988
/locus_tag="PP1Y_Mpl222"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
gene complement(23628..23906)
/locus_tag="PP1Y_Mpl229"
/db_xref="GeneID:10718062"
CDS complement(23628..23906)
/locus_tag="PP1Y_Mpl229"
/inference="protein motif:COG:COG3293"
/note="KEGG: mlo:mll8100"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004537993.1"
/db_xref="GI:334144784"
/db_xref="GeneID:10718062"
/translation="MLADKAYDADHIRATLREKGAFANVPPKANRRSKPYFSTWLYRE
RNLIERFFSKLKHFRRVATRYDKLAENFLAMVQLASMRLWLRVYESTA"
misc_feature complement(23649..23906)
/locus_tag="PP1Y_Mpl229"
/note="Transposase DDE domain; Region: DDE_Tnp_1_2;
pfam13586"
/db_xref="CDD:205764"
gene 23676..23984
/locus_tag="PP1Y_Mpl232"
/db_xref="GeneID:10718070"
CDS 23676..23984
/locus_tag="PP1Y_Mpl232"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004537994.1"
/db_xref="GI:334144785"
/db_xref="GeneID:10718070"
/translation="MDHGKEVFGQLVVSGGHPAEVFQLGEESFDQVALAVEPCAEIWF
RPSVCLRRDIGKRSLLAECRPDMICIICFVGQHACSGGYVIEQVIGSFPVMALAGGQA
"
gene complement(23981..24394)
/locus_tag="PP1Y_Mpl237"
/db_xref="GeneID:10718074"
CDS complement(23981..24394)
/locus_tag="PP1Y_Mpl237"
/inference="protein motif:COG:COG3293"
/inference="similar to AA sequence:UniProt:Q2RVB8"
/note="KEGG: mlo:mll5949"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004537995.1"
/db_xref="GI:334144786"
/db_xref="GeneID:10718074"
/translation="MSRYDLTDFEWRVIEPLLPNKPRGVPRVDDRRVLNGIFWVLRSG
APWRDLPERYGPRTTCYNRFVRWRKAGVWDRMMDAITAAHDGDIQMIDSTSVRAHQQA
ATAKRGIEIIVSVVPEAASRPKSTRSSMGKASRSG"
misc_feature complement(24161..24379)
/locus_tag="PP1Y_Mpl237"
/note="Putative transposase of IS4/5 family (DUF4096);
Region: DUF4096; pfam13340"
/db_xref="CDD:205520"
gene complement(24445..24720)
/locus_tag="PP1Y_Mpl243"
/db_xref="GeneID:10718079"
CDS complement(24445..24720)
/locus_tag="PP1Y_Mpl243"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004537996.1"
/db_xref="GI:334144787"
/db_xref="GeneID:10718079"
/translation="MMIALVWPDTQAWSVRLSESGAVETYNAVVFTLVQGIFAAAALG
ATLIVLFNGFSEGFDPQAIPALLIIWAVSAVGVLGTWFMRRLFTAAR"
gene complement(24856..27705)
/locus_tag="PP1Y_Mpl246"
/db_xref="GeneID:10718085"
CDS complement(24856..27705)
/locus_tag="PP1Y_Mpl246"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B0T9D4"
/note="KEGG: cak:Caul_5189"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004537997.1"
/db_xref="GI:334144788"
/db_xref="GeneID:10718085"
/translation="MDINRRILSSGVAILAIVASSPILAQTKSMNTSIGTNKQLNDGS
DDEQANPQDIIVTGTSIRGVGSVGSPVISLGRETLSEAVRSSPVDILRQLPAVSNLGF
DDTPRTTNNGNVQRGRTINLRGIGAGATLLLIDGNRIAPTGNVVSFVDADQLPTAALE
RIEVVAEGASAIYGSDAVAGVVNYIPRRNFKGIEVSGRTSFTDGYSEWGGSLVAGHNW
GSGSIVVAYDYNKRTEMREGESRFLRQDLTPFGGLDGRVDGNSASLGVPGSIVVARTT
SQGNNPTYPTAGLFNYYTPVVGRDGRLTYAELTLNRANLVDASDYNTYLPANERHQVS
VSLRQEVTSWLTASVLAFYNWKHSQLNIFPSANVNFTPGSAFYVSGIPGVSATANERV
VFSFAKDIGTTLRNQYNKQWQVIGNLKANLPAGWIGQLNFNDSRNINCALCVDANSGN
VDRTALQAAVTAGTYNPLSPTPASAAVLSTFMPAAYDRNRSNLREYALRFDGPLLTLP
GGQMKAAVGATYMEIDQFRTAMGQGSRDVAGVYAKRNVRAAYGELSVPLIGEDFTLPA
VKSLLVNIALRTERYSDFGTTTNPKVGVNWDVVEGLRLRGSWSRSFRAPNLIEIGPQF
FTNITVANQANAAGDPTIPINVGNNQTTVVRVTGGNASLSPEKAKTLTFGFDFKPVDL
PGLNISSTYYDISYSGQIITLQGPSTQFLSNATNRQIYADYIVAASQPSNCLPSDQST
WAQIYRDTFAIPTSSGGNIDVSNICNAKAVIYGRNTNASSVRQRGIDVQASYGWEAAG
SEWRIDISGTKIISNKLQVVPGGAVLDALDVMNQPVSFRGIAGFSWSKGPIMLRPSLN
VVGSYRNDLPITINGVVQPINRVPSWTTVDLVGVLKIGEMLDLVNKVDLTVNVRNLLD
RDPPVVISTNSGYAFDNQNANPFGRIVSLQLTTKF"
misc_feature complement(<26692..27498)
/locus_tag="PP1Y_Mpl246"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
misc_feature complement(<25552..>26883)
/locus_tag="PP1Y_Mpl246"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature complement(<25417..25941)
/locus_tag="PP1Y_Mpl246"
/note="TonB dependent receptor; Region: TonB_dep_Rec;
pfam00593"
/db_xref="CDD:201331"
gene complement(27765..28622)
/locus_tag="PP1Y_Mpl270"
/db_xref="GeneID:10718089"
CDS complement(27765..28622)
/locus_tag="PP1Y_Mpl270"
/inference="similar to AA sequence:UniProt:Q02CE5"
/note="KEGG: sus:Acid_0259"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004537998.1"
/db_xref="GI:334144789"
/db_xref="GeneID:10718089"
/translation="MEMDLTLPDHTVYRPAELPPGVKIPILAWGNGGCANIGNSSEPF
LREIASHGYLAVASGPIAQRPPREEAAGRDAPRPVRDANAPRATRAPNSPRPAQSNNA
SLTAAIDWAIAENSRPGSKYEGRLDTTKIAVLGRSCGGLQAIAIGADPRVKTVIVINS
GIIRGGVPQPDGSLEQRQYIPAGVEDLAKLHTPIAYFVGGHTDQAFRGSEADFLIIDK
LPLFNGNMDVGHGGTFRQPDGGPMGKAVIDWIDWQLKGDKEAAKSFVGADCRLCRDPK
WTVKKKNLR"
gene complement(28739..29764)
/locus_tag="PP1Y_Mpl283"
/db_xref="GeneID:10718107"
CDS complement(28739..29764)
/locus_tag="PP1Y_Mpl283"
/inference="protein motif:COG:COG0657"
/inference="similar to AA sequence:UniProt:C0YKJ0"
/note="KEGG: cak:Caul_2402"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004537999.1"
/db_xref="GI:334144790"
/db_xref="GeneID:10718107"
/translation="MNLSRAFTISAALLVVTGALPVLAATPEEIHLWPGKAPGTEKWT
QPEQVAGQPGRRRITNVSDPTVTVYLPEAGKANGTAIIVAPGGGMRALNIDAGGTSVA
EWLSARGYTALVLKYRIRQQAPGPPGASAERRPALDGGEGRAAPSRTGARAESLPMAG
RPEMVIRDANADPAQDDPEMAIAYRMAVADAGQAIRLVRANSAKWHVDPAKVGIMGFS
AGGGVAVGSGLAEAGPGYPSFVISLYGPSLMDVNVPAYAAPLFMAVKQDHWNVTPGLI
ALFDKWREAKKPVELHVFDMANGAIGMEPTGTPIDSWLDRVTDWLALHDFAPRPNVES
DLRERIQ"
gene complement(29787..30743)
/locus_tag="PP1Y_Mpl293"
/db_xref="GeneID:10718120"
CDS complement(29787..30743)
/locus_tag="PP1Y_Mpl293"
/inference="protein motif:COG:COG2936"
/inference="similar to AA sequence:UniProt:P0A5F5"
/note="KEGG: mtu:Rv1835c"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538000.1"
/db_xref="GI:334144791"
/db_xref="GeneID:10718120"
/translation="MHTPAVKASGVAVLQIGGWSDAAVAGQFESQRVWGGKTVMGPWV
HGNRSLPTVRHAGDTFDVNAEILRWFDHYARGMDNGAGKSEIVYYTQNAVPGTEWRKA
ANWTAASGVRQPFFLSGQALSSRAPAAGGKPVTYAQQEVKLFEGRYSPLRRMWEGNMS
EADAKSLVHTGPVLAGNFQVTGTPTARLWVSTDTRDTNVFAILEDVAPDGKVSYVSDG
RLRASWRKLNPTPWGPSSQLWHRGYAEDIKPMVPGQPTELAFDFFPVSYVFQKGHRIR
LSIVTSIANKWQDPPMTDSKPVNLTLYQDARHPSKVELPIVR"
misc_feature complement(29820..30491)
/locus_tag="PP1Y_Mpl293"
/note="X-Pro dipeptidyl-peptidase C-terminal non-catalytic
domain; Region: PepX_C; smart00939"
/db_xref="CDD:198007"
gene complement(31709..34429)
/locus_tag="PP1Y_Mpl314"
/db_xref="GeneID:10718128"
CDS complement(31709..34429)
/locus_tag="PP1Y_Mpl314"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B0T9D4"
/note="KEGG: cak:Caul_5189"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538001.1"
/db_xref="GI:334144792"
/db_xref="GeneID:10718128"
/translation="MKTSRSYRRLVLFAGSAMTAILPLTGNAQTITTGQISNTIGGEP
VDAKDIVVTGSRIRGVAPVGSTVVAIDREEMAATGQTTTADILRQIPQVTSIGFNAEG
STGAANSSNITRASAPNLRGLGPTATLTIIDGKRVPAAGTQGQLVDPSIIPPIALERA
EVIADGASAIYGSDAVAGVINLIPIKRFSGVEVTGRAALGKNYGDQQVGAIVGTNWTG
GHIVAAVDYVHNSGVDAADRDFITDDRRSFGGQNGLSTNCAAPGTMTVGSSAATGTTY
ALRGGSGVGVLRAGLTAGTSNTCDSSRLINRLLPESQRVSLYAYADQELTENVKIWVQ
GLYSRRSFEAVRSPATLTNQLIPVTNPFRPADVAISGPGSNVYVTYSLVPEVGRINAS
GWARTWQGLSGIEANVGAIRLRASGSYGVGEDAERRKLVNTYQLGLALADSNPLTALN
LFGSGGNNNPATLDKVFSGLSVIHGRSTMGTAEMSADGPLFALPAGDVRFAAGGEYRR
ETLLGDGQSTSRTTGVQQASPSSFYRRTVKAAYGEVFLPLFSPANAVPGIQRLELSAA
LRHEQYSDAGKTTNPKIGINWQPIEGLLLRGSYGKSFRAPGLAESDPTSSGAAVTFTQ
NVTFTGVTGSKNQALIRGGNPSLTPETASTWTAGLDLTAVRGLRLGFTYFDITYQNQI
VDGFGRTALYRANPTLYSNVVAFQGDANFNRIKAIIQGSSLQPANPVDYNDPNLVLVD
ARRINVGKVQTNGIDVDLRYSLRTDNAGTFSLTANATRFFTYKSSELGQPTLRVLNTI
GFPNRFGARGTLGWAKGQFRSQVTVNYTNAYLNTSSTLVPNVKAYTTIDLDVGYTFAE
DASGRNLRLGFNVRNLLDQDPPQVDRDGAYDPSKASAIGRVAAITATTKF"
misc_feature complement(<33725..34303)
/locus_tag="PP1Y_Mpl314"
/note="Outer membrane cobalamin receptor protein [Coenzyme
metabolism]; Region: BtuB; COG4206"
/db_xref="CDD:33936"
misc_feature complement(31712..34234)
/locus_tag="PP1Y_Mpl314"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene complement(34477..34698)
/locus_tag="PP1Y_Mpl334"
/db_xref="GeneID:10718153"
CDS complement(34477..34698)
/locus_tag="PP1Y_Mpl334"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538002.1"
/db_xref="GI:334144793"
/db_xref="GeneID:10718153"
/translation="MSLLAKAVGFRLLIERLDQGKWGDTTLPRARGLAAEITASSTVD
LGKLTLFESSKIASPANRWDVSNWNTYPE"
gene complement(34980..35963)
/locus_tag="PP1Y_Mpl343"
/db_xref="GeneID:10718175"
CDS complement(34980..35963)
/locus_tag="PP1Y_Mpl343"
/inference="protein motif:COG:COG0491"
/inference="similar to AA sequence:UniProt:B7YWE8"
/note="KEGG: vap:Vapar_5001"
/codon_start=1
/transl_table=11
/product="beta-lactamase domain-containing protein"
/protein_id="YP_004538003.1"
/db_xref="GI:334144794"
/db_xref="GeneID:10718175"
/translation="MALKKLRLIKAVGMSCFALACAGAWAQVPVNPTALRAEAAKIAG
DDLKADYLAQCEPVARPRGPRPAGPPPARARVIIEPTQVFDNLYYFGDSFVGATVLKT
SAGLILIDTLTTSEDAANMLVPGMRKFELDPHDIRYVIVTHGHGDHHGGVQYLRQNFP
GFKVVMTEADWAFSAKPLIMPGGRVDPAPKPVRQPGDIGYNGSFKVTLGDTTVSLVET
PGHTPGTQSLLYPVRWHGKPLTVMQWGGGQPEAPQFTQEEVDSFFAKAKAAHASVRWW
SHNYPNTRAKLAQLHAGAKENPFIYGEQRFARYLDVISLCKRAGGISAQSD"
misc_feature complement(<35271..35675)
/locus_tag="PP1Y_Mpl343"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; smart00849"
/db_xref="CDD:197917"
misc_feature complement(<35271..35669)
/locus_tag="PP1Y_Mpl343"
/note="Zn-dependent hydrolases, including glyoxylases
[General function prediction only]; Region: GloB; COG0491"
/db_xref="CDD:30837"
gene complement(36057..37088)
/locus_tag="PP1Y_Mpl352"
/db_xref="GeneID:10718182"
CDS complement(36057..37088)
/locus_tag="PP1Y_Mpl352"
/inference="similar to AA sequence:UniProt:Q02CE5"
/note="KEGG: dfe:Dfer_2249"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538004.1"
/db_xref="GI:334144795"
/db_xref="GeneID:10718182"
/translation="MKRFPKIAAAFLIGMLSSSAVLAQAADAEIGGLSETEVPPTGPY
GAVMEYDSSIRPAQTIYRPRDLGKIGRMPIVVWGSGGCRFNGGAASRRFLLEVASYGY
FIVAPGNPGPDRPVEPTADRVIQSPRPRPVEGARPPRLATGARGARPPQPGGESVPGE
SREKTLPANMEAAIDWAVNENDRDGSAYRGKLAVDKIAASGRSCGGLLALSIQQDPRV
KAAMIWNSGIFGRPGAGGGVEITKDALKQLHTPVLYVAGGADDVAHENAVDDVSRINH
VPVFFGEIPTGHPGTMRQANGGSTSKVAVAWLDWQLKGDERAGRMFSGEDCELCRNPV
WTVVRKNMK"
misc_feature complement(36144..>36911)
/locus_tag="PP1Y_Mpl352"
/note="Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
[Amino acid transport and metabolism]; Region: DAP2;
COG1506"
/db_xref="CDD:31695"
gene complement(37297..38637)
/locus_tag="PP1Y_Mpl367"
/db_xref="GeneID:10718194"
CDS complement(37297..38637)
/locus_tag="PP1Y_Mpl367"
/inference="similar to AA sequence:UniProt:A9AZC5"
/note="KEGG: hau:Haur_1023"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538005.1"
/db_xref="GI:334144796"
/db_xref="GeneID:10718194"
/translation="MLYLISLGSRNTGFPGHVKFVNRMADWLATAPGVSVLRDTYTLP
RWEEVSRSLQVRRPGGKAVALHSTSAYPYSGKTSAKGVTGKIVDLGSTQSNGMANSRP
LVFPDVRGKIVFLRSPVHGFPAGDSFKAWGAYPDDLKLPDLLKTELYQTRSAPALEQF
KEAGAAGVILSWVGVSDANAEGQYVPFGRKFADCPALWVGETTGEEIAKVAAAGGEAT
IALEANIFPNTPTDTLYGILPGQTDEVILVHTHSDGPNAVEENGPIGVVALAKFLAAQ
PKGSLRRTYVFTMTTGHMAGAYVPSVRGFIQKHADIIKRTVGALVIEHLGSREWVDRG
QAYVPSGYNQTTMLQTQSSALAKIALEESRGTLEDRVVAVNPYKGRYTGESGATMSAG
IPTIGFMPAPSFLLKESENCGIEKQDPRLLRAQLENFSRMLLRMDGMSKADLAG"
misc_feature complement(<37618..>37935)
/locus_tag="PP1Y_Mpl367"
/note="Domain of unknown function (DUF2172); Region:
DUF2172; pfam09940"
/db_xref="CDD:150595"
gene 39188..39670
/locus_tag="PP1Y_Mpl384"
/db_xref="GeneID:10718210"
CDS 39188..39670
/locus_tag="PP1Y_Mpl384"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B0SVQ9"
/note="KEGG: cak:Caul_2073"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538006.1"
/db_xref="GI:334144797"
/db_xref="GeneID:10718210"
/translation="MRKLLVTSCLVALTATAQVAAAQTIREPTKTAPSSATEIDVSET
KAADIVVTGTRLASGFNTPTPVTVVTTEQLNTAGKPSLAEAIAQLPVFKGPAISSQPT
NGSPNGTNGQSLLNLRGLGAQRNLLLLDGQRVIATNAAGSVDVNMADSTGRVSIRRCE
"
misc_feature 39401..>39661
/locus_tag="PP1Y_Mpl384"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene complement(39770..40681)
/locus_tag="PP1Y_Mpl391"
/db_xref="GeneID:10718222"
CDS complement(39770..40681)
/locus_tag="PP1Y_Mpl391"
/inference="protein motif:COG:COG0583"
/inference="similar to AA sequence:UniProt:A4XX96"
/note="assigned by KAAS to KEGG Orthology:K05798 LysR
family transcriptional regulator, transcriptional
activator for leuABCD operon"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_004538007.1"
/db_xref="GI:334144798"
/db_xref="GeneID:10718222"
/translation="MNIRKVDLGSLVALDRLLAERSLSRVARDVGLSQPAMSHMLARI
RRIFNDPLLVRDGSAMVLTAEGVELKARLEVALPELLALFSPTRFVPMESRTTFKLAI
TDHAGQVLLPRLLGELREQAPHVQISISVIPNRQTDLEELDRGQFDLRVGWLRSLPPH
WHRRKLMTDSIVLIGAIDHPDLVEPLTIERFVALDHVALQSDRPIYPNLIDSYLSSKQ
LHRNVVAHVSHFSLVPSIIASTRMVAMLPRRLAEEQARLGQIQIVKPPLEFPDNDLSM
AWHPRIHVAVEYVWLRKLIATFCKAPL"
misc_feature complement(39782..40681)
/locus_tag="PP1Y_Mpl391"
/note="leucine transcriptional activator; Reviewed;
Region: leuO; PRK09508"
/db_xref="CDD:181918"
misc_feature complement(40484..40660)
/locus_tag="PP1Y_Mpl391"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(39794..40393)
/locus_tag="PP1Y_Mpl391"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulators that involved in the
catabolism of nitroaromatic/naphthalene compounds and that
of related regulators; contains the type 2 periplasmic
binding fold; Region: PBP2_Nitroaromatics_like; cd08417"
/db_xref="CDD:176109"
misc_feature complement(order(39860..39862,40064..40066,40175..40177,
40352..40354,40364..40369,40373..40375))
/locus_tag="PP1Y_Mpl391"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:176109"
misc_feature complement(order(39965..39967,39974..39979,39986..39991,
39998..40012,40097..40099,40286..40288,40295..40309,
40313..40318,40325..40330,40334..40339,40346..40351,
40358..40363,40370..40372))
/locus_tag="PP1Y_Mpl391"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176109"
gene 40855..42153
/locus_tag="PP1Y_Mpl402"
/db_xref="GeneID:10718229"
CDS 40855..42153
/locus_tag="PP1Y_Mpl402"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:A7HTW5"
/note="KEGG: pla:Plav_1729"
/codon_start=1
/transl_table=11
/product="major facilitator transporter"
/protein_id="YP_004538008.1"
/db_xref="GI:334144799"
/db_xref="GeneID:10718229"
/translation="MTTPMSATVPAPKAWKPYLALFSLYLLNTLLVLDKIVFTILVEP
VKAEFGLDDFQVGLLTGSVYAVCLGVASLPLGMLVDRSSRRNIAAGCLAFWSAMTALC
GMAQSYTTLLAARLGVGIGEAGGGPASLSMIADLFDHRRRATAMAIFALGTPTAGLLN
LTINTNLAHTYGWRFALFAASVPGLVLAITMRLFIAEPERATGTGGVPPKAASFSQTF
HFIRTQRSLVHFLIGGAVAYIVLAGVSSWSFSFLIRVHHVKLHEVGPILGVAIAISGL
FGLFLSGRLADVLSRRDERWRTWVMTITTLMSVCFGTATFSVGSWQAAVIGMAGFATT
ATLWLAPGYALSQSLVPARMRGMIGAIVFMLANVLGYGLGPALVGLLSDLLAPVYGTL
AIRTALIGTVSLNLWAAFHFMLGARTLRADLDVAGLEQQQ"
misc_feature 40915..42003
/locus_tag="PP1Y_Mpl402"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(40957..40959,40966..40974,40978..40983,41032..41034,
41044..41049,41056..41058,41068..41073,41077..41082,
41218..41223,41230..41235,41242..41247,41254..41256,
41290..41295,41302..41307,41323..41325,41566..41568,
41575..41580,41587..41592,41599..41601,41641..41643,
41656..41658,41668..41670,41677..41679,41689..41691,
41848..41850,41857..41862,41869..41871,41881..41886,
41893..41895,41926..41931,41938..41943,41950..41955,
41965..41967)
/locus_tag="PP1Y_Mpl402"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature 40960..41979
/locus_tag="PP1Y_Mpl402"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
gene 42165..43154
/locus_tag="PP1Y_Mpl414"
/db_xref="GeneID:10718241"
CDS 42165..43154
/locus_tag="PP1Y_Mpl414"
/inference="protein motif:COG:COG0667"
/inference="similar to AA sequence:UniProt:A7HL79"
/note="KEGG: sth:STH2508"
/codon_start=1
/transl_table=11
/product="putative potassium channel subunit beta"
/protein_id="YP_004538009.1"
/db_xref="GI:334144800"
/db_xref="GeneID:10718241"
/translation="MQYQSLADDLPSVSRLSLGSWNTFSRCSSEQLEALLARAFERGI
NLLDVGYYWDKPDTEDAVAAALRGLAAPRDSYTIAQKLWLWDYPEHSFAEQLGRSLQR
LGSDHVDIVMVSRPTADLALEPFIGEVVALVEAGMARAWGVTNFTPEQLRDTLALVNQ
RNWPHPVLLQVQYNVMRRGVVEGPGYAELFAEGAIRLCAANMLEGGILAGHLERDRVN
PPEFAEGKRPVHRNICRDSGGIRELIRERQPRLREIARDFGASPAQLALAFGLSHPHL
GTALVGVTEPDHVDENVAALALLDCATEIRAAVDELAIEGVAHPKLFNPHNGI"
misc_feature 42171..43100
/locus_tag="PP1Y_Mpl414"
/note="Aldo-keto reductases (AKRs) are a superfamily of
soluble NAD(P)(H) oxidoreductases whose chief purpose is
to reduce aldehydes and ketones to primary and secondary
alcohols. AKRs are present in all phyla and are of
importance to both health and industrial...; Region:
Aldo_ket_red; cd06660"
/db_xref="CDD:119408"
misc_feature 42207..43106
/locus_tag="PP1Y_Mpl414"
/note="Aldo/keto reductase family; Region: Aldo_ket_red;
pfam00248"
/db_xref="CDD:201112"
misc_feature order(42219..42227,42306..42308,42321..42323,42405..42407,
42504..42509,42594..42599,42672..42674,42762..42779,
42951..42953,43002..43013,43026..43028,43035..43040)
/locus_tag="PP1Y_Mpl414"
/note="active site"
/db_xref="CDD:119408"
misc_feature order(42306..42308,42321..42323,42405..42407,42504..42506)
/locus_tag="PP1Y_Mpl414"
/note="catalytic tetrad [active]"
/db_xref="CDD:119408"
gene 43160..44143
/locus_tag="PP1Y_Mpl427"
/db_xref="GeneID:10718252"
CDS 43160..44143
/locus_tag="PP1Y_Mpl427"
/inference="protein motif:COG:COG0667"
/inference="similar to AA sequence:UniProt:A9AR89"
/note="KEGG: mes:Meso_3129"
/codon_start=1
/transl_table=11
/product="aldo/keto reductase"
/protein_id="YP_004538010.1"
/db_xref="GI:334144801"
/db_xref="GeneID:10718252"
/translation="MEALRLGRSGLKVSQLALGTASFGDTDRAAWNVGADMAWNLVRH
AFDRGITLFDTGSTYGGGLAEDRLGQAVERLGHRDEIVLTSKVYFPTGPDANARGLSR
KHIVAALDRSRARLRTDYVDVLMLHRWDAHTPIEETLTALDILVRSGRVLYTGASSMS
AWRMMKVLGLQRASGMAPFIAMQGLYNLLYREEEREMMPLCREEGIGCMAWSPLARGR
LAGAAGDPVRLAQDPLAASRFTPDLDAPVLAALDAASVRTGLPHAQLALGWLAARQAI
PVIGAASAEQIDVAIAAVSSRPDAVTCAAMEASYRPHAVSGFDPLDEHAPV"
misc_feature 43160..44110
/locus_tag="PP1Y_Mpl427"
/note="Predicted oxidoreductases (related to aryl-alcohol
dehydrogenases) [Energy production and conversion];
Region: Tas; COG0667"
/db_xref="CDD:31011"
misc_feature 43172..44083
/locus_tag="PP1Y_Mpl427"
/note="Aldo-keto reductases (AKRs) are a superfamily of
soluble NAD(P)(H) oxidoreductases whose chief purpose is
to reduce aldehydes and ketones to primary and secondary
alcohols. AKRs are present in all phyla and are of
importance to both health and industrial...; Region:
Aldo_ket_red; cd06660"
/db_xref="CDD:119408"
misc_feature order(43214..43222,43319..43321,43334..43336,43415..43417,
43538..43543,43628..43633,43706..43708,43790..43807,
43946..43948,43991..44002,44015..44017,44024..44029)
/locus_tag="PP1Y_Mpl427"
/note="active site"
/db_xref="CDD:119408"
misc_feature order(43319..43321,43334..43336,43415..43417,43538..43540)
/locus_tag="PP1Y_Mpl427"
/note="catalytic tetrad [active]"
/db_xref="CDD:119408"
gene complement(44659..47154)
/locus_tag="PP1Y_Mpl441"
/db_xref="GeneID:10718264"
CDS complement(44659..47154)
/locus_tag="PP1Y_Mpl441"
/EC_number="2.3.1.54"
/inference="protein motif:COG:COG1882"
/inference="similar to AA sequence:UniProt:Q30WU7"
/note="assigned by KAAS to KEGG Orthology:K00656 formate
C-acetyltransferase"
/codon_start=1
/transl_table=11
/product="formate C-acetyltransferase"
/protein_id="YP_004538011.1"
/db_xref="GI:334144802"
/db_xref="GeneID:10718264"
/translation="MLPPVTTKKAMNLSQAETLDVRAAPSRSARIERMRTALDTVRAG
RFPISIEKFRLVTRAFAASEGQPQVIRVARALAAVLDEITIFIEPDDMLAGNLATKPG
GLELTSLWAAWSEPELDALVAAGFEIDPADRPKIAELNRYWRDRSLTARMTSLYDDER
VWPYAQLGVVLPPFRNREEGWGPGGMLGCGWGIHHEISQIIGVFDYETVLKRGLSALL
GDAREQLSQTRILSAEDVQRADLLRAMIITLEAVIRFAGRLSRLAADLAEHEAAPARA
EELRQMADTLQRIPAEPARTFREALQSLWIVLLIVLPSGVISLGRFDQLFGHYYDADL
AAGRITEAAALEYLQWLRIRDSQIVITSGHTHRAKYGGLAKWHNCVIGGQTPDGRDAT
NPMSYLVLEAARTCPTPHPTITLRVHDETPPDLMESALQLIGTGIGIPALLGDRSCID
FLTREGVPLETARDYAVAGCLGVNIPGQSRTIAWPMCSAPLILTIALHGGVDPRTGNQ
VGPRTARLDECTSFAEVMDSLKTQLVHFIELQAEFNNITMQSYGECFPQPFESALTVG
GIGASKNILGRTLLLENGSCINPIGMINVSDALAALRKVVFEDGTVSASDMLAHLAAN
WEGGAGEAARAQVQAAPKFGNDDDAADLIAAELYEFWAKCTEALTTVYGGNFKAAALT
IGTANFPGGAALGATPDGRKAGDPLADEAVTPVGGRYDHGVLAALRSALKIDQVRWQS
MSLDMRLHPDAMASPPGRQDVARMVRDYFAGGGKHIQFNVISTETLRAAQADPAAYAD
LIVRIGGCSAYFTQLARAVQDEIISREAARSIT"
misc_feature complement(44671..47073)
/locus_tag="PP1Y_Mpl441"
/note="glycyl radical enzyme, PFL2/glycerol dehydratase
family; Region: PFL2-3; TIGR01774"
/db_xref="CDD:162527"
misc_feature complement(44683..47067)
/locus_tag="PP1Y_Mpl441"
/note="Ribonucleotide reductase and Pyruvate formate
lyase; Region: RNR_PFL; cl09939"
/db_xref="CDD:186877"
gene 47351..47797
/locus_tag="PP1Y_Mpl470"
/db_xref="GeneID:10718278"
CDS 47351..47797
/locus_tag="PP1Y_Mpl470"
/inference="protein motif:COG:COG3328"
/inference="similar to AA sequence:UniProt:Q0BR69"
/note="KEGG: gdi:GDI2780"
/codon_start=1
/transl_table=11
/product="putative transposase"
/protein_id="YP_004538012.1"
/db_xref="GI:334144803"
/db_xref="GeneID:10718278"
/translation="MTDDRMALVELIEQGADSDLVREMLAFAAERMMDLEIEARTGVP
SGSRSPARLNHRNGYREHGWDTRAGRIDLAIPKLRKGSYFPSFLEPRRTAEKALAAVI
QEAYVHGVSTRSVDDLVKAMGASGVSKSQVSRRFCRKLWPAVRLAL"
misc_feature 47369..>47785
/locus_tag="PP1Y_Mpl470"
/note="Transposase, Mutator family; Region:
Transposase_mut; pfam00872"
/db_xref="CDD:109910"
gene complement(47913..49535)
/locus_tag="PP1Y_Mpl478"
/db_xref="GeneID:10718301"
CDS complement(47913..49535)
/locus_tag="PP1Y_Mpl478"
/inference="similar to AA sequence:UniProt:A6UJJ7"
/note="KEGG: sme:SMc03257"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004538013.1"
/db_xref="GI:334144804"
/db_xref="GeneID:10718301"
/translation="MRKVSMATRKELIEAVGARYRASDRSSKGKVLDEFVAVTGFHRK
HAMRVLRQEASDRTPERVGRRIYDEAVRTALAVLWEASDRLCGKRLKPLIPILVEAME
SHGHLDLAPQVKASLFQMSPATIDRSLSAIREAGQTKKRRRGVSGTELRRSVPIRTFD
DWGDPAPGHMEVDLVSHSGPAAKGSWAWTFTLTDIATGWTECAPLLVREQTLLVAVLS
ELRRLMPFPLLGFDSDNDSVFINETVRDYCVAHGIAFTRCRPYRKNDQAWVEQKNGSV
VRRLTGYRRFEGLEAAGALAELYTAARLFVNFFQPSFKLAEKQREGAKVYKRYHAPAT
PFQRLLADPRTSEETRRNLREAFADLDPVRLLRDIRTAQEKLVRLADGAAVMNPSEPS
SPTLDAFMTSLRTLWHEGEARPTATAKAPQKRWRRRPDPLVTVTEQLKAWFEEEPWRT
GRELLERLQAEQPGDYPDGLLRTVQRRLKVWRSEHARALVFNPSASSDGRPLRAETVS
SLPRDWVPHRVASGSAARHPVAQGIAREGDLL"
misc_feature complement(48696..49037)
/locus_tag="PP1Y_Mpl478"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
gene 49940..50215
/locus_tag="PP1Y_Mpl501"
/db_xref="GeneID:10718307"
CDS 49940..50215
/locus_tag="PP1Y_Mpl501"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538014.1"
/db_xref="GI:334144805"
/db_xref="GeneID:10718307"
/translation="MMIALVWPDTQAWSVRLSESGAVETYNAVVFTLVQGIFAAAALG
ATLIVLFNGFSEGFDPQAIPALLIIWAVSAVGVLGTWFMRRLFTAAR"
gene 50266..50679
/locus_tag="PP1Y_Mpl505"
/db_xref="GeneID:10718324"
CDS 50266..50679
/locus_tag="PP1Y_Mpl505"
/inference="protein motif:COG:COG3293"
/inference="similar to AA sequence:UniProt:Q2RVB8"
/note="KEGG: mlo:mll5949"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004538015.1"
/db_xref="GI:334144806"
/db_xref="GeneID:10718324"
/translation="MSRYDLTDFEWRVIEPLLPNKPRGVPRVDDRRVLNGIFWVLRSG
APWRDLPERYGPRTTCYNRFVRWRKAGVWDRMMDAITAAHDGDIQMIDSTSVRAHQQA
ATAKRGIEIIVSVVPEAASRPKSTRSSMGKASRSG"
misc_feature 50281..50499
/locus_tag="PP1Y_Mpl505"
/note="Putative transposase of IS4/5 family (DUF4096);
Region: DUF4096; pfam13340"
/db_xref="CDD:205520"
gene complement(50676..50984)
/locus_tag="PP1Y_Mpl511"
/db_xref="GeneID:10718330"
CDS complement(50676..50984)
/locus_tag="PP1Y_Mpl511"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538016.1"
/db_xref="GI:334144807"
/db_xref="GeneID:10718330"
/translation="MDHGKEVFGQLVVSGGHPAEVFQLGEESFDQVALAVEPCAEIWF
RPSVCLRRDIGKRSLLAECRPDMICIICFVGQHACSGGYVIEQVIGSFPVMALAGGQA
"
gene 50754..51032
/locus_tag="PP1Y_Mpl512"
/db_xref="GeneID:10718336"
CDS 50754..51032
/locus_tag="PP1Y_Mpl512"
/inference="protein motif:COG:COG3293"
/note="KEGG: mlo:mll8100"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538017.1"
/db_xref="GI:334144808"
/db_xref="GeneID:10718336"
/translation="MLADKAYDADHIRATLREKGAFANVPPKANRRSKPYFSTWLYRE
RNLIERFFSKLKHFRRVATRYDKLAENFLAMVQLASMRLWLRVYESTA"
misc_feature 50754..51011
/locus_tag="PP1Y_Mpl512"
/note="Transposase DDE domain; Region: DDE_Tnp_1_2;
pfam13586"
/db_xref="CDD:205764"
gene complement(51022..51435)
/locus_tag="PP1Y_Mpl518"
/db_xref="GeneID:10718338"
CDS complement(51022..51435)
/locus_tag="PP1Y_Mpl518"
/inference="protein motif:COG:COG3316"
/inference="similar to AA sequence:UniProt:Q11AJ6"
/note="KEGG: mlo:mll9070"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004538018.1"
/db_xref="GI:334144809"
/db_xref="GeneID:10718338"
/translation="MFKGRHFEGSLIMLCVRWYLAYGLSLRDLEEMIAERGVAVDHST
IHRWVLHYTPQLLDAFNARKRSVTSKWNVDETYIKVKGEWMYLYRAIDKSGATVDFLF
SNTRNLRDAKRFFRRAYKRHGLPVQLTIDGSQTRP"
misc_feature complement(<51025..51435)
/locus_tag="PP1Y_Mpl518"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3316"
/db_xref="CDD:33125"
misc_feature complement(<51118..51375)
/locus_tag="PP1Y_Mpl518"
/note="Integrase core domain; Region: rve; cl01316"
/db_xref="CDD:207376"
misc_feature complement(<51034..51228)
/locus_tag="PP1Y_Mpl518"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
gene 51605..52060
/locus_tag="PP1Y_Mpl522"
/db_xref="GeneID:10718344"
CDS 51605..52060
/locus_tag="PP1Y_Mpl522"
/inference="similar to AA sequence:UniProt:B9K432"
/note="KEGG: avi:Avi_8254"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004538019.1"
/db_xref="GI:334144810"
/db_xref="GeneID:10718344"
/translation="MTARWPDPDRAIIGRYVASLDLRSTKSRACYAQVLHGLQDVAER
YEALDQEVLLVWLRESAVRRAPSTLLHRTRIVDRFFEHLAEIGAIQRNPVSALRDECN
IKQCMPIWRALASRNPEEALAELRQPRPFGSVLGEMMAEHVAMMRRRGY"
gene 52117..52470
/locus_tag="PP1Y_Mpl530"
/db_xref="GeneID:10718348"
mobile_element 52117..52470
/inference="protein motif:COG:COG2963"
/inference="similar to AA sequence:UniProt:Q2CBS1"
/mobile_element_type="insertion sequence:ISxac3"
gene complement(52345..52596)
/locus_tag="PP1Y_Mpl532"
/db_xref="GeneID:10718356"
CDS complement(52345..52596)
/locus_tag="PP1Y_Mpl532"
/note="KEGG: pla:Plav_2371"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538020.1"
/db_xref="GI:334144811"
/db_xref="GeneID:10718356"
/translation="MIVLAGPNGAGKSTLYETRVAQSFAGPFINADIIQRDELRDPSP
DASYEAAEIAASRRADHLARGRDFVTETVHRRAQPATVF"
misc_feature complement(<52378..52590)
/locus_tag="PP1Y_Mpl532"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(order(52555..52566,52579..52581))
/locus_tag="PP1Y_Mpl532"
/note="active site"
/db_xref="CDD:73295"
gene complement(52605..52961)
/locus_tag="PP1Y_Mpl535"
/db_xref="GeneID:10718358"
CDS complement(52605..52961)
/locus_tag="PP1Y_Mpl535"
/inference="similar to AA sequence:UniProt:A7HVP7"
/note="KEGG: pla:Plav_2370"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538021.1"
/db_xref="GI:334144812"
/db_xref="GeneID:10718358"
/translation="MAQSIKLGDDIMKIVRRESELQSRSIAGQIAHWVRIGRAIEKSG
NFDHARITAALAGDIQTTDLTDEEKDVWLDSFIEKMEQPGSDENAFFARRRQYGLGVG
LDAAGNVVREKATPKA"
misc_feature complement(52668..52958)
/locus_tag="PP1Y_Mpl535"
/note="Protein of unknown function (DUF3423); Region:
DUF3423; pfam11903"
/db_xref="CDD:152339"
gene complement(54210..54638)
/locus_tag="PP1Y_Mpl558"
/db_xref="GeneID:10718362"
CDS complement(54210..54638)
/locus_tag="PP1Y_Mpl558"
/inference="protein motif:COG:COG3193"
/inference="similar to AA sequence:UniProt:B9QVM9"
/note="KEGG: swi:Swit_1726"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538022.1"
/db_xref="GI:334144813"
/db_xref="GeneID:10718362"
/translation="MNRISLSQANTIIAAAFEMASQSGLKPLSVAVLDPGGHMIAFQR
QDGTSMLRQKIACGKAAGALALGMSSRRIRDMAVQWPAFVGSLGQISPDGVIPAVGGV
IVVDAEGEPLGAVGVTGDTGDNDEACALAGIAAAGLRAQE"
misc_feature complement(54261..54638)
/locus_tag="PP1Y_Mpl558"
/note="Domain of unknown function (DUF336); Region:
DUF336; cl01249"
/db_xref="CDD:207356"
gene 54896..55084
/locus_tag="PP1Y_Mpl566"
/db_xref="GeneID:10718384"
CDS 54896..55084
/locus_tag="PP1Y_Mpl566"
/inference="ab initio prediction:grc:1.0"
/inference="protein motif:COG:COG3316"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538023.1"
/db_xref="GI:334144814"
/db_xref="GeneID:10718384"
/translation="MCWYCRYGISYRDLEEMQEDLDEWVTNYNEQRPHQGRWCFGKTP
MQTFVDATPMAKEKMIAA"
misc_feature <54908..55027
/locus_tag="PP1Y_Mpl566"
/note="Integrase core domain; Region: rve_3; cl15866"
/db_xref="CDD:210266"
gene 55163..55375
/locus_tag="PP1Y_Mpl572"
/db_xref="GeneID:10718393"
CDS 55163..55375
/locus_tag="PP1Y_Mpl572"
/inference="similar to AA sequence:UniProt:Q0ZKT5"
/note="KEGG: sty:HCM1.162c"
/codon_start=1
/transl_table=11
/product="putative transposase"
/protein_id="YP_004538024.1"
/db_xref="GI:334144815"
/db_xref="GeneID:10718393"
/translation="MRGFKSMPTAYATIKGFEVMRALRKGQARPSCLQPGIVGEVRLV
ERAFGMGPSALIETMTMLNQHFANAS"
misc_feature <55163..55243
/locus_tag="PP1Y_Mpl572"
/note="DDE domain; Region: DDE_Tnp_IS240; pfam13610"
/db_xref="CDD:205788"
gene complement(55780..56781)
/locus_tag="PP1Y_Mpl579"
/db_xref="GeneID:10718398"
CDS complement(55780..56781)
/locus_tag="PP1Y_Mpl579"
/inference="protein motif:COG:COG1609"
/inference="similar to AA sequence:UniProt:A4XFH9"
/note="assigned by KAAS to KEGG Orthology:K06145 LacI
family transcriptional regulator, gluconate utilization
system Gnt-I transcriptional repressor"
/codon_start=1
/transl_table=11
/product="LacI family transcriptional regulator"
/protein_id="YP_004538025.1"
/db_xref="GI:334144816"
/db_xref="GeneID:10718398"
/translation="MAEIPEKVPTLDDVALRAGVSSATVSRFVNNPKVVAAATAERIR
AAIAEVGYIPNLLAGGLASSRSKMVAVLIPHLVDSIFNDTIEAMVEELSSGGFTVMLG
LTGVSAARTNELIRAALSRKVDAIISSGPIDASIPALVSRSTTLFIQIWELPEHPVGL
AIGFSHRDAGSDMARFLMSRGYRRPHLVTADGARAGVRRDGFVEEWQTLGGSNVTHAT
VDIPSRFGHGRRVFADVRRLPEMPDVVVCGSDYLAQGLIVEAQAAGLRVPEDVAVVGF
GNSSIAGEMRPTITTMDVDGRRIAREAIAAIRRYGEGSALPDHPIDVGFRLIARESA"
misc_feature complement(55786..56757)
/locus_tag="PP1Y_Mpl579"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:31797"
misc_feature complement(56593..56745)
/locus_tag="PP1Y_Mpl579"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature complement(order(56596..56601,56605..56610,56617..56619,
56626..56628,56665..56667,56674..56679,56692..56694,
56701..56706,56710..56724))
/locus_tag="PP1Y_Mpl579"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature complement(56599..56628)
/locus_tag="PP1Y_Mpl579"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature complement(55786..56580)
/locus_tag="PP1Y_Mpl579"
/note="Type 1 periplasmic binding fold superfamily;
Region: Periplasmic_Binding_Protein_Type_1; cl10011"
/db_xref="CDD:209116"
gene complement(56829..58004)
/locus_tag="PP1Y_Mpl590"
/db_xref="GeneID:10718404"
CDS complement(56829..58004)
/locus_tag="PP1Y_Mpl590"
/inference="protein motif:COG:COG2124"
/inference="similar to AA sequence:UniProt:A4XFI0"
/note="KEGG: nar:Saro_3832"
/codon_start=1
/transl_table=11
/product="cytochrome P450"
/protein_id="YP_004538026.1"
/db_xref="GI:334144817"
/db_xref="GeneID:10718404"
/translation="MKEIMQDFDPERPEDFDSAHAEYARLRRECPVAHTDGLGGFWAL
TRYDDVKRAASDPLFVTSVQNVVPKVAFTGRRPPLHLNPPEHTPYRKALNPLLSQERA
EALAPHTRTLARELLAPMVAKGGGDICVEFSSHLPVHVFGEWMRMPEESLATLHDAGR
AFILAVHSTKPESMKETSLRLYEMARDLIALRHREPQDPAIDPTSALLAARHEGEPLP
DELVLGTVRQVLVVGMVAPMVMIGSIAVHLSRDLALQQRLRSDPSLIPSAIEEFLRLY
TPYRGFARTPVCPVEMGGRMIDKDEAVALVYASANRDEAVFPNPGEFIMDRPNIAEHL
AFGRGPHNCPGLHIGRMQLRVALEELLVATKQFDLDGEIMMSRWPEIGALSVPLRFD"
misc_feature complement(56832..58004)
/locus_tag="PP1Y_Mpl590"
/note="Cytochrome P450 [Secondary metabolites
biosynthesis, transport, and catabolism]; Region: CypX;
COG2124"
/db_xref="CDD:32307"
gene 58076..59374
/locus_tag="PP1Y_Mpl599"
/db_xref="GeneID:10718416"
CDS 58076..59374
/locus_tag="PP1Y_Mpl599"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:A4XEA0"
/note="KEGG: nar:Saro_3401"
/codon_start=1
/transl_table=11
/product="major facilitator transporter"
/protein_id="YP_004538027.1"
/db_xref="GI:334144818"
/db_xref="GeneID:10718416"
/translation="MSSQPAAADLEQAIGRKVLVRLVIPCALYILIGAIDRTNVSFAA
LQMNQDLGLSGSEYGFGAGVLFIGYMLAKYPSVLVYERIGMHRWLAMITLAWGLSSCA
MAGVRNEWELYGLRVIIGITEGGLSSGLMLYLSHWAPERYRASILAIPITSISIAQVI
GAPISGMLLDATNPFGMPGWRFMFLVEALPALALAVFAWLHFPDRPANAKWLDSAERN
WLATNVRGAKRESSGDRDGGRWDMLSSPVGWTCAAIWFCILASNYGVMFWLPQVVKGM
TGLSATQTGIVVALPWAASAVGLLLNARHSDRTGERYLHVALPALAGGCGLLIAFLAG
PGLLGLTALTIGGACTGCTVAAFWAIPIRLMKPAALAMGIVVINMFGSLAGATVPALM
GVLQQMSGSFLPPTLLLFGIAVACAGLCLVARSADRRARG"
misc_feature 58142..>58594
/locus_tag="PP1Y_Mpl599"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 58169..59326
/locus_tag="PP1Y_Mpl599"
/note="D-galactonate transporter; Region: 2A0114;
TIGR00893"
/db_xref="CDD:162094"
misc_feature order(58184..58186,58193..58201,58205..58210,58259..58261,
58268..58273,58280..58282,58292..58297,58301..58306,
58442..58447,58454..58459,58466..58471,58478..58480,
58514..58519,58526..58531,58547..58549)
/locus_tag="PP1Y_Mpl599"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature <58820..59347
/locus_tag="PP1Y_Mpl599"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene 59386..60567
/locus_tag="PP1Y_Mpl616"
/db_xref="GeneID:10718424"
CDS 59386..60567
/locus_tag="PP1Y_Mpl616"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:A4XEA1"
/note="assigned by KAAS to KEGG Orthology:K07552 MFS
transporter, DHA1 family, bicyclomycin/chloramphenicol
resistance protein"
/codon_start=1
/transl_table=11
/product="MFS transporter DHA1 family
bicyclomycin/chloramphenicol resistance protein"
/protein_id="YP_004538028.1"
/db_xref="GI:334144819"
/db_xref="GeneID:10718424"
/translation="MERNNRKLVLLAGIAAMGSMAIHMLVPALPMIAADFAVGPGEAQ
HILGFYLFFLGAGQLVAGQFVDRIGRRPVLLAGLMAYTAGAFTAFLAPSLSALLAARV
LQAAGGAAGVVTARVIVSDDASPGEGAARQATLMMVVLISPALSPVVGGLIASSAGWR
GVFVLLALAGLFALAAAWIAIAESRPGDGEAMPARSLVQSLWAGYHRLLTDRAFLGAA
GALAAMSSALYIFLANAPFLLESRYGLSPDEVGIAFLFVAVGGIAGSRLVALLERRTD
ALVAGVALGVTGSVAALAGDLSGLTGPAALIAPLILLGVSAGVAGPAGIGRAIAVNPS
LAGTAASLAGAGQMLISSLAITVISWFSPVGSSKLCIALVIATAIAAGCAALARPRET
A"
misc_feature 59407..>59865
/locus_tag="PP1Y_Mpl616"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(59449..59451,59458..59466,59470..59475,59524..59526,
59533..59538,59545..59547,59557..59562,59566..59571,
59707..59712,59719..59724,59731..59736,59743..59745,
59779..59784,59791..59796,59812..59814)
/locus_tag="PP1Y_Mpl616"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 60651..62855
/locus_tag="PP1Y_Mpl626"
/db_xref="GeneID:10718440"
CDS 60651..62855
/locus_tag="PP1Y_Mpl626"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:A4XEA2"
/note="KEGG: nar:Saro_3403"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538029.1"
/db_xref="GI:334144820"
/db_xref="GeneID:10718440"
/translation="MPVSVFTRSSIAALLCSVAVPALAQTATEGASGSQASKALDEII
VTAERREQSLQDIPISATVLTGDQLAQKGVTNLNDIQQVAPSIAINTFNRSTFINIRG
VGIAQSAPTSNPGVAYYIDGQLIPHEQFIGFSFYDIGSLEVLRGPQGTLTGQNSTGGA
IYVRTPDPSFDDVSGYVDATASNYDRYRVVGAINVGGESVALRIAAVHEERDSFTKNI
ADNAQSQPGNLNMDAVRATLRLQGMDSRLNVHVRGEYFDVRSDNNAVKNRNDAITSDP
FVIEEDGRSYQNQAGYRIGGEIRYDVSEAMQARALVSWQDGFTHDQTDGDRTATALPV
PANLPTSSANTRLYPGRVSNASTEFKTLIGELNLLSTGNGPFQWVVGAFALDETVPVS
LYRDNRHTTDFVVSNSDIVTTAKNTSYSLFGQANWFVTPQIELIAGGRYSWDKQVYTR
FAVPGPPIPLPYVSAASSHQLTGKLGVNYHFDDNNMLYLTASKGYKAGGVNLTPNTPD
FLPERNFVYEAGFKTELLDRHLRVNGDVFYSVYKDIQLSSLLNGLPVTQNALGGHSKG
GEIEITGQFGGLAFNLGAGYLDAKFSNSGCITDTNAPGTDAGCPTGLRFVPKGRVLPF
SPDWTINGGIQYTFPVGGIDVTPRVQWSHVGDQNATPFPSFNTLVPSRDLFDARLTFD
LGSKYKLEAFVNNLTDKTYIATQIQNSSSADGGIIYGAPRTYGVRIKVAFGD"
misc_feature 60651..62846
/locus_tag="PP1Y_Mpl626"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature 60828..62846
/locus_tag="PP1Y_Mpl626"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(60828..60857,60885..60914,60942..60959,60975..60983,
61029..61037,61062..61085,61119..61145)
/locus_tag="PP1Y_Mpl626"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(61623..61625,61713..61715)
/locus_tag="PP1Y_Mpl626"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 62917..64377
/locus_tag="PP1Y_Mpl641"
/db_xref="GeneID:10718448"
CDS 62917..64377
/locus_tag="PP1Y_Mpl641"
/inference="protein motif:COG:COG1858"
/inference="similar to AA sequence:UniProt:A4XEA3"
/note="KEGG: nar:Saro_3404"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538030.1"
/db_xref="GI:334144821"
/db_xref="GeneID:10718448"
/translation="MIGAAAVSIAAARPPLPRWWSPGEGRVFPEQLDYQNDEGTLRLL
LTGGKLDTKGHPFFEPIGRNGRACVTCHQPADAMSLSAQSARERWDATGGKDPLFAAY
DGSNCPSLPQGARASHSLLLDRGLIRIERAWPVREWNGKAVTPDFTITVVRDPNGCNS
GPDHGPEHGNISVYRRPRPVANMKYLLAAGFPFDPKQGYALPIDPRTGKMMSGNIMAD
NRTGTLRLQMEDAGSTHLQMLKRLGEADISRIEDFEKRIFTAQQVGKDAGALDTLGAK
GGPAHLRDSEPGALGSIGEPVWSEFAKWEDISPEDAKTLTPAQLAFRQSVARGAKVFR
DKTFLISDTAGINSRIGFGNPVRNSCVFCHNMSQMGNDVAPGQVDLGTTTMPFADPMP
DLPLFRITCLKAPHPHYGRVFYTMDPGFALTSGRCGDVGKITLQSMRGLAARAPYFSN
GLAKDLRGVVDYYDRRYDIGYTEQEKRDLVNLMSVL"
misc_feature <63847..64314
/locus_tag="PP1Y_Mpl641"
/note="Cytochrome c peroxidase [Inorganic ion transport
and metabolism]; Region: MauG; COG1858"
/db_xref="CDD:32043"
gene 64374..65147
/locus_tag="PP1Y_Mpl653"
/db_xref="GeneID:10718461"
CDS 64374..65147
/locus_tag="PP1Y_Mpl653"
/inference="similar to AA sequence:UniProt:A4XEA4"
/note="KEGG: nar:Saro_3405"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538031.1"
/db_xref="GI:334144822"
/db_xref="GeneID:10718461"
/translation="MKSLATLVALGASLAAPAQDTGELVRFVTCPVYRDTDAGRKSGC
WLATDRESGQRYDVSWSPYKPDWNYAILVEGRVSEEPPTPCGDTVLRPVRTSRLYEIP
CTRHMLPAEAYPGRRYKLQGRYIDPLSVPRETPPGPYAQRTFTAYFEYGNDFLIYQYD
DYLLDNAATWIRAAKPGKLVVTGFAATDPVEVSGVTLAEPVELARQRAETIAETLRRL
VPGIPVETRWQAGTTRSDDPDADTIPGQAERRVEIRAVF"
misc_feature 64800..65135
/locus_tag="PP1Y_Mpl653"
/note="Peptidoglycan binding domains similar to the
C-terminal domain of outer-membrane protein OmpA; Region:
OmpA_C-like; cl02931"
/db_xref="CDD:212269"
misc_feature order(64821..64826,64932..64937,64944..64946,64968..64973,
64980..64982,65109..65111,65118..65120)
/locus_tag="PP1Y_Mpl653"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:143586"
gene 65372..66805
/locus_tag="PP1Y_Mpl667"
/db_xref="GeneID:10718472"
CDS 65372..66805
/locus_tag="PP1Y_Mpl667"
/EC_number="2.7.8.-"
/inference="protein motif:COG:COG1502"
/inference="similar to AA sequence:UniProt:A8I630"
/note="assigned by KAAS to KEGG Orthology:K06131
cardiolipin synthase"
/codon_start=1
/transl_table=11
/product="cardiolipin synthase"
/protein_id="YP_004538032.1"
/db_xref="GI:334144823"
/db_xref="GeneID:10718472"
/translation="MIDLGTATWLIVAALYLAVIVRAILLDGRDSYARAAWLLLLIAL
PVIGVILYLLFGEPWISRGFRERGRRVYEEFLPFAPRSAQQAGTAGLATNAFRTFEAA
SHWPVSTGNTARIAPDSDTGIAMLVADIDTAEQSVHLSFYIWLGDNNGTKVVEAVCRA
ARRGVTCRIVADAIGSRSLIHSARWSAMRDAGARLCSSLQAPLGLGFLVGHRTDLRNH
RKIAVIDGRVTYCGSQNCADPAFLVKRRFAPWVDILVRYEGPVTRQADIIFASAWTAE
TGEDLRPYMTMDPPQPSADGFAAIATGTGPLSPRGTMTDMFVAVLAAAKVSVTITTPY
FAPDPPLIGAIVAAARRGVEVRIVFPRRNDNRIVGAISRAYYPVLAKAGVRIFEYYGG
LLHAKTVVVDDALALIGSSNMDRRSLELNFENNILFESAELAVQLRDRQQRWLKDAIE
IDRGDATNRAIARRFVDNLLTMTAALF"
misc_feature 65393..66778
/locus_tag="PP1Y_Mpl667"
/note="cardiolipin synthetase; Reviewed; Region: cls;
PRK01642"
/db_xref="CDD:179315"
misc_feature 65699..66190
/locus_tag="PP1Y_Mpl667"
/note="Catalytic domain, repeat 1, of Escherichia coli
cardiolipin synthase and similar proteins; Region:
PLDc_EcCLS_like_1; cd09152"
/db_xref="CDD:197250"
misc_feature order(66023..66025,66029..66031,66068..66070,66074..66076,
66125..66127)
/locus_tag="PP1Y_Mpl667"
/note="putative active site [active]"
/db_xref="CDD:197250"
misc_feature 66023..66025
/locus_tag="PP1Y_Mpl667"
/note="catalytic site [active]"
/db_xref="CDD:197250"
misc_feature 66278..66790
/locus_tag="PP1Y_Mpl667"
/note="Catalytic domain of phospholipase D superfamily
proteins; Region: PLDc_SF; cl15239"
/db_xref="CDD:210050"
misc_feature order(66554..66556,66560..66562,66599..66601,66605..66607,
66638..66640)
/locus_tag="PP1Y_Mpl667"
/note="putative active site [active]"
/db_xref="CDD:197200"
misc_feature 66554..66556
/locus_tag="PP1Y_Mpl667"
/note="catalytic site [active]"
/db_xref="CDD:197200"
gene 67142..67960
/locus_tag="PP1Y_Mpl685"
/db_xref="GeneID:10718485"
CDS 67142..67960
/locus_tag="PP1Y_Mpl685"
/inference="protein motif:COG:COG0668"
/inference="similar to AA sequence:UniProt:A3SXT4"
/note="KEGG: ara:Arad_7915"
/codon_start=1
/transl_table=11
/product="mechanosensitive ion channel protein"
/protein_id="YP_004538033.1"
/db_xref="GI:334144824"
/db_xref="GeneID:10718485"
/translation="MLFLLFGFALSWLLRRAVVTLIDHDPNERIDRMTISFIQHLATF
VMWIVLALLFSHLVPSLNKLTTSLLAGVSIVSVVVGFAAQSTLGNLVSGISLVIYKPF
RRGDRLQLTAPTGLETGIVEELSLGYTVLRTFDNRRIVLSNGTIANQIMINLSSVDLK
VMMSLTISIGYASDIDKARQIVLDLAQAHEGVTEVVGCPVINLGGSSVDLSLRAWCPD
AATSKSVEYDLLEQIKKRFDEAGIEIPYAYQNVVLTGQVSVGDADPDGVTGPPR"
misc_feature 67148..67900
/locus_tag="PP1Y_Mpl685"
/note="Small-conductance mechanosensitive channel [Cell
envelope biogenesis, outer membrane]; Region: MscS;
COG0668"
/db_xref="CDD:31012"
misc_feature 67283..67873
/locus_tag="PP1Y_Mpl685"
/note="Mechanosensitive ion channel; Region: MS_channel;
pfam00924"
/db_xref="CDD:201506"
gene complement(68037..69416)
/locus_tag="PP1Y_Mpl700"
/db_xref="GeneID:10718500"
CDS complement(68037..69416)
/locus_tag="PP1Y_Mpl700"
/inference="protein motif:COG:COG2079"
/inference="similar to AA sequence:UniProt:A4XEA8"
/note="KEGG: nar:Saro_3409"
/codon_start=1
/transl_table=11
/product="MmgE/PrpD family protein"
/protein_id="YP_004538034.1"
/db_xref="GI:334144825"
/db_xref="GeneID:10718500"
/translation="MRETCDHVSDTLCQWVSDLAFGDLPESTVAAARHVLLDASGVIL
AASGLSPEVRPFIALAEGEGPCRILGTGMTAPPQMAAFANGAMAHALDYEDAFDRAPG
HPNASLVPALLALAQSHGSVDGERFMAALVAGCEVSCRLGLALRRPMEAGGWYPPPIL
AGIGAAAGAAKLLGCSPRQVRSAISLAMCQVTIPGEIKHSAGTVIRAVREAFPAQASV
QAALLARARVAGFERPLEGEAGFYALYAGGAFDPEALAGDLGQRLCIEELTFKPWPSC
RGTHPFIEMALALREDHDLTPPQIEAIHVGIDDVQRMLTEPPARKAAPETAIDAKFSI
PFTVALAIARGGVGLDDFGAETLCDPALLALAGKVVAAADRQTGARARGVGGSIRIEL
ADGRSFSAGCTTARGSPQMPLSEAQLVEKFIDCAARAEVPLPARTASALADRILALES
CQDVGQLFA"
misc_feature complement(68151..69401)
/locus_tag="PP1Y_Mpl700"
/note="Uncharacterized protein involved in propionate
catabolism [General function prediction only]; Region:
PrpD; COG2079"
/db_xref="CDD:32262"
gene complement(69418..70767)
/locus_tag="PP1Y_Mpl720"
/db_xref="GeneID:10718515"
CDS complement(69418..70767)
/locus_tag="PP1Y_Mpl720"
/EC_number="3.1.1.73"
/inference="similar to AA sequence:UniProt:UPI00016A5003"
/note="KEGG: cak:Caul_0593"
/codon_start=1
/transl_table=11
/product="feruloyl esterase"
/protein_id="YP_004538035.1"
/db_xref="GI:334144826"
/db_xref="GeneID:10718515"
/translation="MCRVEGRIEGNIGFELWLPEQWNGRLLGAGVGGDAGVFNYRDMS
LRISQGFAVVSTDSGHKASQAHWMTDAKARTDYTHRALHLTTRAAKALAERFYGRPAN
RSYFTGCSGGGRQALKEMETYPGDYDGVIAGAPGPYMPLQSVRMLWFALEQKRRPQAA
LTDADWHLYETRVTQQCDGLDGVSDGIMENPAACRFDTATLLCKPGQTGECLSAPKLA
MLDAIIAPMPDEQGRPMDKGLFPGVRTRPGPPSPLLRAMWADGVFGNPDWDEMTFRRR
ADLAAANRKMPELRADRTAIAPFIASGGKAIMYQGWQDPSVNAGPTIDFYAALAQANG
GKEQLARSVRLFMVPGMYHCRGGPGADIFGASAQIPVPDDRDPSRDMLWALIHWVEDG
LAPESIVAARKSEGAASFTRKLCPFPQSARYDGKGRTDSASSWKCVDDPLLERMMGS"
misc_feature complement(69454..70764)
/locus_tag="PP1Y_Mpl720"
/note="Tannase and feruloyl esterase; Region: Tannase;
pfam07519"
/db_xref="CDD:116138"
gene complement(70953..73547)
/locus_tag="PP1Y_Mpl738"
/db_xref="GeneID:10718534"
CDS complement(70953..73547)
/locus_tag="PP1Y_Mpl738"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B0T9D4"
/note="KEGG: cak:Caul_5189"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538036.1"
/db_xref="GI:334144827"
/db_xref="GeneID:10718534"
/translation="MASLAAPAWAQDSASSTDDASAVINKSADDKQIEAIIVTGSRIR
GVAPVGSNVIAIGTDEIAREPVTSTNDLLRRVPQVVSLGANRNGGTAQNGAANATRGA
GINLRGISTNATLLLYDGKRFPPQGTQGQYTDPSVIPAIALERVEVVADGASAIYGSD
AIAGVVNFIMRKNFDGVEVRGRLGMTDSKYAEQQIAGVIGKTWNGGSAMIAAEFTHNS
ALRGYDLDWYQDDNRARGGRDLRTTNCDPGTLSVGGTTYAIPQGGLTAANAGTLVPGT
SNKCFLNAQDTVIPKQNRYNVVGNISQDLTPDIRLFADGFYSYRDGTIAGVNTINATV
PSTNPFFVSPVAGASSVSVAYSLVPTVGPDFNPYHGSSWNLMGGIEARPFGDWRATVY
YAHGESEDVADRRLGINSGALAVALADTDPATALNVFGGPNNPATIAAIRDRLFVITG
KTRLDVVNAQMDGSLFELPGGAARLAVGAEYRKEYTFTDLEIGSSVSAAHIADGGSRN
VKAVFGELFVPVVGAGNAMSGIEQLSLSLAGRYEKYSDFGHTSNPKIGLTYKPVDAVT
IRGSYGTSFRAPTFTEVSTVAGGAGLYYDLLPGPAGNQRGIGIAGGNPDLKPETATTW
SVGGDIAPVRGLRATLTYFHIDYKNQIQALRGTPGLLTNPLYSSFVILNPSAAQVQDL
IASGLPINAPIDETNVTFIADGRRQNLGRSVVAGLDFGVYLDWAIGAVQFDASAQGTY
FSKYDFESVPGAGLTGVRGTINFPQKFRSQADLGARFGKFSARIVWNHLDGYENNTVT
PVQKVSSYDTFDVNLGVDVTSAFHVGLDVRNLFDRDPPFVDTQRGHDPQSANPVPRLI
SMTAGVKF"
misc_feature complement(70956..73394)
/locus_tag="PP1Y_Mpl738"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(73038..73064,73098..73130,73179..73202,
73221..73238,73272..73274,73311..73337,73365..73394))
/locus_tag="PP1Y_Mpl738"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(<72534..73238)
/locus_tag="PP1Y_Mpl738"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature complement(order(72198..72200,72282..72284))
/locus_tag="PP1Y_Mpl738"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene complement(73653..74687)
/locus_tag="PP1Y_Mpl760"
/db_xref="GeneID:10718547"
CDS complement(73653..74687)
/locus_tag="PP1Y_Mpl760"
/inference="similar to AA sequence:UniProt:A4XEA9"
/note="KEGG: nar:Saro_3410"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538037.1"
/db_xref="GI:334144828"
/db_xref="GeneID:10718547"
/translation="MKRSPLLSVPLEAWVMLYLLSYLPNVMVTKYVTSVPHGNLERPL
TGLETLPASLIISMVLTYGFIWLSGWHRDAHAVSIGRARLPVPTRYTLLSGIGTALIL
FTVPLSFTFQGVSIPFIQLLMRGDILIIAPLVDMIFGRRVRWWSWTALAMVLLALFIT
LADRGGLKLPPIAIVTILLYTLGYFIRLAVMTKIAKSGDPASVRRYFVEEKMIALPLS
VVALGLLSASGIGGQSGELAWGFVKIWSDPALWSLAFIGATLTVISVISIIILLDPRE
NAYCVPLERAASLVAGVGGTILLAAFFGLPAPRLAELVGAGILIGAIVLLSVAPRLSV
SAMRARAETN"
gene complement(74684..75805)
/locus_tag="PP1Y_Mpl768"
/db_xref="GeneID:10718565"
CDS complement(74684..75805)
/locus_tag="PP1Y_Mpl768"
/inference="protein motif:COG:COG2843"
/inference="similar to AA sequence:UniProt:A4XEB0"
/note="KEGG: nar:Saro_3411"
/codon_start=1
/transl_table=11
/product="poly-gamma-glutamate biosynthesis protein"
/protein_id="YP_004538038.1"
/db_xref="GI:334144829"
/db_xref="GeneID:10718565"
/translation="MTHLFLATGDLAMDREVYDESFVATRDALQAADVTFGQLETSFA
ERGTRLPQARHAVLARPEGAAALARAGFNCISMAGNHCMDWGVEAFFETRANLDSAGL
RVVGAGKDIREARRPARFTLGDGTRIAVLAYSSILPQGYWADERRAGCAPMRAFTVYE
QIEHDQPGTPARIHTYPHREDLAAMEADIRAAKADADLVFVSQHWGIHFVRAEIAEYQ
RDVARAAIAAGADAIFGGHAHILKGCEVIDGKPVFYSLSNFATDLRMDEAHAASKSWN
EIRVLAEEWEPDFGGLYNFPTASRLGMVARIEIADGKMTRAGFQPLYIGRDAVPRFTA
AGSDEFTQTLDYMRAVTEEAGLNARYRIEGEIVEIEGVA"
misc_feature complement(75020..75793)
/locus_tag="PP1Y_Mpl768"
/note="Bacterial capsule synthesis protein PGA_cap;
Region: PGA_cap; smart00854"
/db_xref="CDD:197922"
misc_feature complement(75029..75793)
/locus_tag="PP1Y_Mpl768"
/note="CapA and related proteins, metallophosphatase
domain; Region: MPP_CapA; cd07381"
/db_xref="CDD:163624"
misc_feature complement(order(75089..75091,75095..75097,75194..75196,
75563..75568,75686..75688,75770..75772,75776..75778))
/locus_tag="PP1Y_Mpl768"
/note="putative active site [active]"
/db_xref="CDD:163624"
misc_feature complement(order(75089..75091,75095..75097,75194..75196,
75566..75568,75686..75688,75770..75772,75776..75778))
/locus_tag="PP1Y_Mpl768"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:163624"
gene 76070..76948
/locus_tag="PP1Y_Mpl784"
/db_xref="GeneID:10718573"
CDS 76070..76948
/locus_tag="PP1Y_Mpl784"
/inference="similar to AA sequence:UniProt:Q02CE5"
/note="KEGG: dfe:Dfer_2249"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538039.1"
/db_xref="GI:334144830"
/db_xref="GeneID:10718573"
/translation="MAAAQAKRDAIPDTAGDGPFPAVMEMDPSLPDHVIYRPRDLSAM
GARKLAVLAWGNGGCSDDGASARLHLAEIASYGYLVIAPGEIRSGPHAMSPRKPSRSA
GADGQLPPPATTAEDVRAGIDWAIAQAGKSDSPYAGHIAIDQIAVAGHSCGGLQAIEL
APDPRVKTVMIDNSGIFNDGVQAIAGMHVDKAMLGGFHTPTLYILGGPTDIAYANGVD
DFSRIEKVPAVLLNLPVGHGGTFFEPMGGAVAHVAVDWLEWQLRGDRTAARTFKGQNC
RLCSGTDWTIEKKGID"
misc_feature <76172..76603
/locus_tag="PP1Y_Mpl784"
/note="Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
[Amino acid transport and metabolism]; Region: DAP2;
COG1506"
/db_xref="CDD:31695"
gene complement(76956..78251)
/locus_tag="PP1Y_Mpl797"
/db_xref="GeneID:10718588"
CDS complement(76956..78251)
/locus_tag="PP1Y_Mpl797"
/inference="similar to AA sequence:UniProt:B5I6L3"
/note="KEGG: cai:Caci_2024"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538040.1"
/db_xref="GI:334144831"
/db_xref="GeneID:10718588"
/translation="MAFGHLRWLCCAALAVSQAACAPHFASPVLAAEGSVNAAHLRGD
VLWSVRVPEHWNGTLLVWSRGYARKAGAPEAAPDRFIVPLLARGYALAGSDYGSGGWA
LADAVPAQNLVVDEFARKYGKPRRVIGWGMSMGGLVTSALAEQDKPRIDGALALCSSI
GGAVGMMNMALDGAFAFRTLVAPNEGIQLVGVKDDMANGRRVAAAVAQAQTSADGRAR
IALAGVLAGIPGWTGPDSPEPSGDDFEAQVDEIAKAFAMGVMLPREDQETRAGGPFSW
NTGIDYRRQLEKSGRSAFVERLYRSAGLDLDDDLARLASAERISAKPQAVSYMMAHYT
PDANPRVPLLAVQAIGDGMTSPSLQRAYGKAAPGTLVQSLYVRRSGHCAFSQDEILAA
LDTLEGRLEAGRWSRPGAPFIAYDPPPMLRPCFRGRSCQ"
misc_feature complement(<77718..78017)
/locus_tag="PP1Y_Mpl797"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:205026"
gene complement(78382..79428)
/locus_tag="PP1Y_Mpl815"
/db_xref="GeneID:10718597"
CDS complement(78382..79428)
/locus_tag="PP1Y_Mpl815"
/inference="protein motif:COG:COG1835"
/inference="similar to AA sequence:UniProt:Q2GAZ5"
/note="KEGG: nar:Saro_0531"
/codon_start=1
/transl_table=11
/product="acyltransferase 3"
/protein_id="YP_004538041.1"
/db_xref="GI:334144832"
/db_xref="GeneID:10718597"
/translation="MKRLNGLDALRGIAAVSVLLHHINIDRVSMTSNNAYLAVDFFFM
LSGYVMARTYEGRFATGLGAARFMFLRYARLWPVMAFAFLLGIPAALTGMGLTGIAVL
SFAFNMALLPYWAAWSPYPYNVAAWSIFYELVANLMHTLLFWRVRTRLLVLCVLAMGA
VFIGRGLTAPILHVDGLGAFGFAGGLPRVLMSYPLGIVLYRLWRDDPPISIPAPLAYL
TMPVVFMGSELSGVRNIFMDLAFVLILCPVMIAAALKWEPPAVAKKLGEISFPLYAVH
VPVMTLMSISKLSDFLAIPASFILAVIVDRAVSRLRRDRLATDQTEPAASGTPLQDAG
SGIAGPVAGHVHLN"
misc_feature complement(78406..79428)
/locus_tag="PP1Y_Mpl815"
/note="Predicted acyltransferases [Lipid metabolism];
Region: COG1835"
/db_xref="CDD:32020"
misc_feature complement(78517..79419)
/locus_tag="PP1Y_Mpl815"
/note="Acyltransferase family; Region: Acyl_transf_3;
pfam01757"
/db_xref="CDD:201957"
gene complement(79625..80218)
/locus_tag="PP1Y_Mpl824"
/db_xref="GeneID:10718610"
CDS complement(79625..80218)
/locus_tag="PP1Y_Mpl824"
/inference="protein motif:COG:COG1309"
/inference="similar to AA sequence:UniProt:Q1AZC2"
/note="KEGG: rxy:Rxyl_0280"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_004538042.1"
/db_xref="GI:334144833"
/db_xref="GeneID:10718610"
/translation="MPKIVDHSARRRAVAEIAAKLIARDGIEGTKVRDIARLAGYSTS
IVSHYFKSKHELLMSAYRMRMERTVARVEEVSREGSALLDSLASVLPLDEERVESWRI
WLAFWGLATADETFLQEQRQRSRESVDLFHRAIVNSGAMPDDEQSRLVAQALLSSVAG
IATQAIYDPDNWPAQRQLRILKLHLDNHIPGWESRSG"
misc_feature complement(79628..80218)
/locus_tag="PP1Y_Mpl824"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature complement(80039..80167)
/locus_tag="PP1Y_Mpl824"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
misc_feature complement(79661..79963)
/locus_tag="PP1Y_Mpl824"
/note="Bacterial transcriptional repressor; Region:
TetR_C_6; pfam13977"
/db_xref="CDD:206147"
gene 80347..81576
/locus_tag="PP1Y_Mpl832"
/db_xref="GeneID:10718621"
CDS 80347..81576
/locus_tag="PP1Y_Mpl832"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:B5ELK1"
/note="assigned by KAAS to KEGG Orthology:K08224 MFS
transporter, YNFM family, putative membrane transport
protein"
/codon_start=1
/transl_table=11
/product="MFS transporter YNFM family membrane transport
protein"
/protein_id="YP_004538043.1"
/db_xref="GI:334144834"
/db_xref="GeneID:10718621"
/translation="MEAEKITPGTAAYRLLCIAMLFAGLSTFALLYCTQPLMPLFSKT
YGVAAEEASLAVSLATGPMAFVLLVAGKLSDRLGRRPMMIASLLAAAALTTLLGLLPN
WQSLLAARFLCGLALAGVPAVAMAYISEEVEDGAVGRAMGLYIGGSAIGGMSGRLLVS
VLTEYFGWRDALGITGIAGLIIAALFWKILPPSRQFIPRHHSWGSYMAGFRHLFADKA
LPWLFVEAFLIMGAFISIYNYAGYRLLAPPYALSQAQVGLIFLLYLLGSISSAVAGHF
SGEFGPRKCLWLPLVLFVFGIALTAASALPLIIAGIGTVTIAFFAAHAIASAWVGRRA
RRDRAQATACYLFFYYLGSSVLGSAGGYAWTGVGWNGVTFFSCTLVLTALAIAFRLYR
VAPLPSPVPETSPIAAE"
misc_feature 80395..>80853
/locus_tag="PP1Y_Mpl832"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(80437..80439,80446..80454,80458..80463,80512..80514,
80521..80526,80533..80535,80545..80550,80554..80559,
80695..80700,80707..80712,80719..80724,80731..80733,
80767..80772,80779..80784,80800..80802)
/locus_tag="PP1Y_Mpl832"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature 80533..>81291
/locus_tag="PP1Y_Mpl832"
/note="Arabinose efflux permease [Carbohydrate transport
and metabolism]; Region: AraJ; COG2814"
/db_xref="CDD:32643"
gene complement(81587..82003)
/locus_tag="PP1Y_Mpl847"
/db_xref="GeneID:10718629"
CDS complement(81587..82003)
/locus_tag="PP1Y_Mpl847"
/inference="protein motif:COG:COG0784"
/inference="similar to AA sequence:UniProt:Q2NB84"
/note="assigned by KAAS to KEGG Orthology:K03413
two-component system, chemotaxis family, response
regulator CheY"
/codon_start=1
/transl_table=11
/product="two-component system, chemotaxis family,response
regulator CheY"
/protein_id="YP_004538044.1"
/db_xref="GI:334144835"
/db_xref="GeneID:10718629"
/translation="MQPRPEDSAVQTPEPVTKRRCLLIDDSRVIRKVARRILEGLAYE
VSEAENGEEALVQCRSAMPDLFMVDWNMPVMSGLEFVTSLRGMQGDRRPKVMFCTTNS
NTDDIRKGIEAGADEYVIKPFDQQSLHAKLLRIGAA"
misc_feature complement(81599..81940)
/locus_tag="PP1Y_Mpl847"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(81605..81940)
/locus_tag="PP1Y_Mpl847"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(order(81638..81643,81650..81652,81707..81709,
81773..81775,81797..81799,81926..81931))
/locus_tag="PP1Y_Mpl847"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(81797..81799)
/locus_tag="PP1Y_Mpl847"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(81773..81781,81785..81790))
/locus_tag="PP1Y_Mpl847"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(81635..81643)
/locus_tag="PP1Y_Mpl847"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 82173..82640
/locus_tag="PP1Y_Mpl853"
/db_xref="GeneID:10718646"
CDS 82173..82640
/locus_tag="PP1Y_Mpl853"
/inference="protein motif:COG:COG0840"
/inference="similar to AA sequence:UniProt:A5PE95"
/note="KEGG: eli:ELI_11235"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis receptor/sensory
transducer"
/protein_id="YP_004538045.1"
/db_xref="GI:334144836"
/db_xref="GeneID:10718646"
/translation="MASEVKELADCTSGAAEEASQQIRVIQELTECSVAALRVIGKDI
EELEATSVSIAAAVDQQSIAGQDLARSIDLAARSADDVTSNIEQVRETSLSTGAAASQ
VLTSSTELEQQAIMLKLQVDQFLQHVRTPDDNAQQSRQRVSHPEDLSELLVAG"
misc_feature <82176..82439
/locus_tag="PP1Y_Mpl853"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
gene 82811..85231
/locus_tag="PP1Y_Mpl858"
/db_xref="GeneID:10718651"
CDS 82811..85231
/locus_tag="PP1Y_Mpl858"
/inference="similar to AA sequence:UniProt:B1ZP67"
/note="KEGG: ote:Oter_4283"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase domain-containing protein"
/protein_id="YP_004538046.1"
/db_xref="GI:334144837"
/db_xref="GeneID:10718651"
/translation="MSVPVGNPARPLRHPLGAGKDHFSVTRRKLLTGTASAAAATALG
ELGSPVPSGAAPIPTARDRLWYCQPAREWTEALPVGNGRIGAMVFGGTGLERLQLNED
TLWTGGPYNPVNPSAREALPQIRRLIEQGHFTQAQTLADARLMARPLSQMAYQTFGDL
TIAMPHLGTIEQGSYLRELDLDAALAATTFKADGVSWSRKVIASPDHQVIAVHLSADR
PGRMHCLVGLGAPHDGVLSIDGGTLIFGGRNNAAHGVEGALRFEARARVLPQGGRISV
SDNKLAVEGADAVTILIAMATSYRQFDDVGGDPSQITRSQIEAASRHSFARIAADTAA
SHRRLYRRVSLDLGETPAAHRPTDERIRTSETSQDSALAALYFQYGRYLLICSSRPGS
QPANLQGIWNDSDDPPWGSKYTININTEMNYWPAEPTALGECVAPLVALVRDLAQTGA
STAREMYGARGWVAHHNTDLWRATAPIDGAAWGLWPMGGAWLCTHLWDHYDYHRDTAF
LRSVYPLLRGAALFFLDTLQRDPASGYLVTNPSISPENEHPGGASVCAGPSVDRQILR
DLFAQTARAATILGLDDDLSAQILDTSRRLAPDEIGAQGQLQEWLEDWDSSAPEPHHR
HVSHLYGLFPSHQINLDETPDLAMAARKSLELRGDESTGWATAWRANLWARLREGDHA
HRILRYLLGPDRTYPNMFDAHPPFQIDGNFGGAAAIAEMLVQCRDDEIRLLPALPRAW
PDGSVRGLRIRGACKVSLEWRAGELVCARLVSRIAGMRIVHLNERSAEVELVPGRPVT
LNGPLLRT"
gene complement(85239..87908)
/locus_tag="PP1Y_Mpl884"
/db_xref="GeneID:10718659"
CDS complement(85239..87908)
/locus_tag="PP1Y_Mpl884"
/EC_number="3.2.1.21"
/inference="protein motif:COG:COG1472"
/inference="similar to AA sequence:UniProt:B0SVR3"
/note="assigned by KAAS to KEGG Orthology:K01188
beta-glucosidase"
/codon_start=1
/transl_table=11
/product="beta-glucosidase"
/protein_id="YP_004538047.1"
/db_xref="GI:334144838"
/db_xref="GeneID:10718659"
/translation="MVFPVAISPVSVAAQEAGSMTGISPVRAKARAMAADLVAKMTLD
EKLGQLLNTAPAIPRLDIPAYNWWTESLHGALGSLPTTNFPEPIGLAATFDASLVKDV
AGAISTEVRGLHALARKTGRMGRIGTGLDTWSPNINIFRDPRWGRGQETYGEDPYLTA
RMGVSFVEGMQGPDPDLPDVIATPKHFAVHNGPESTRHHANVFVSRHDLEDTYLPAFR
AAIVEGRAGSVMCAYNRVDGQPACASQELLQEHLVDAWGFQGYVVSDCDAVKDISDNH
KYAPDGAAAVAAAMRMGVDSECHTWTLSDTDGLTDRYREALERGLITVSDVDRTLIRL
FSARLRNGDLPGVRKLSTFTSSAADVGTPAHGALALKAAEESLVLLKNDGILPFQTAG
MKVAVIGPFGDATRVLRGNYSSTISAPPISVVDGLRQAMPKATVSYVPFGETVTDGDP
VPESALVSDDGKPGLTARYYNVQGTPPKLFDPGKRDEYLKTVKFSEKPVVTRRERSVD
GRSLDLAQVSDHHRVVWTGYLVPPESGTYRLGLSGFQSGRMDFDGKPFVDLKDAQWGS
LPTMKTLTLEKGHRYPVRIIGEAHTGTAGIGFAWKRISTDPAGDMRRAAQAADVLVAV
VGLTSDLEAEESPIEIPGFKGGDKTTLDIPADQQELLEQAKATGKPLIVVAMNGSPIN
LHWAKENADAILEAWYPGQSGGLAIANVLTGKANPTGKLPLTFYRSVEDLPPFDDYDM
KGRTYRYFTGKAVYPFGYGLSYTTFGYGPVAVEPASGGAQDGIRVTTQVSNTGQRAGG
DAVQLYLDFPDAPGTPNIALRGFQKVSLQPGETRQVTFTLSPRDLSSVTPDGVRKVLK
GHYRVTVGSGQPGFSAATRSADFSVEKAVTLPK"
misc_feature complement(86898..87785)
/locus_tag="PP1Y_Mpl884"
/note="Glycosyl hydrolase family 3 N terminal domain;
Region: Glyco_hydro_3; pfam00933"
/db_xref="CDD:201514"
misc_feature complement(86103..86522)
/locus_tag="PP1Y_Mpl884"
/note="domain in bacterial beta-glucosidases other
glycosidases, glycosyltransferases, proteases, amidases,
yeast adhesins, and bacterial toxins; Region: PA14;
smart00758"
/db_xref="CDD:128997"
misc_feature complement(85314..85508)
/locus_tag="PP1Y_Mpl884"
/note="Fibronectin type III-like domain; Region: Fn3-like;
pfam14310"
/db_xref="CDD:206478"
gene complement(88168..89709)
/locus_tag="PP1Y_Mpl911"
/db_xref="GeneID:10718682"
CDS complement(88168..89709)
/locus_tag="PP1Y_Mpl911"
/inference="similar to AA sequence:UniProt:Q21G69"
/note="KEGG: cak:Caul_2406"
/codon_start=1
/transl_table=11
/product="tryptophan halogenase"
/protein_id="YP_004538048.1"
/db_xref="GI:334144839"
/db_xref="GeneID:10718682"
/translation="MQRPTKKIVIVGGGTAGWLTAGVIAARHLSRMPGGFSVTLVESP
NTPIIGVGEGTWPTLRTTLAKIGVSETDFFRECDAAFKQGAKFARWTTGAHDDAYYHP
LMLPQSFAQLNLAPHWLANGESSFCDAVCPQGRICDDGLAPKTIATPEFEALANYAYH
LDAGKFAPFLQRHCTQKLDVRHVLADVQRVEMTEDGDIKSVVTEQAGEIEGDLFIDCT
GFKALLIGEALGVPFKDCSDVLFCDTALAVQLPYESETSAIASHTISTAQSAGWIWDI
GLPTRRGIGYVYSSDHTSGDDAERELRTYLGAAGKDLPIRKIPIRSGHRETFWKRNCV
AVGLAAGFLEPLEASAIVLIELSAKLIAEQMPACREVMDPIARRFNATTDYRWGRIID
FLKLHYVLTQRRDSAFWQDNLRPESIPERLQELLLLWKYQGPWFHDEFDRVEEVFPPA
SYQYVLYGMGFRTEVEHEALAGDAGLAARAMRENAAQTQRLRAGLPRHRDLIRKIVDH
GLQPV"
misc_feature complement(88306..89691)
/locus_tag="PP1Y_Mpl911"
/note="Tryptophan halogenase; Region: Trp_halogenase;
pfam04820"
/db_xref="CDD:203096"
gene complement(89774..92698)
/locus_tag="PP1Y_Mpl929"
/db_xref="GeneID:10718708"
CDS complement(89774..92698)
/locus_tag="PP1Y_Mpl929"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B0SVR6"
/note="KEGG: cak:Caul_2407"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538049.1"
/db_xref="GI:334144840"
/db_xref="GeneID:10718708"
/translation="MISNHTGRTLSSRLRHGLFAASASGVLAFALTAPAYAQETGGEA
GNTAPQARDGENGVIIVTGIRGSLQRNLDAKREAPGVVDVISSEEIGKFPDSNVAASL
QRLPGVSIQRDGPRGEANGVTIRGFGGDFNETLVDGRRLSTATGGRSIDFSTVGSDFI
GSLAVYKTPDVAVGSNSIGATIDIAYPKPLDRPGFHMAASASGSIQNYAKKVVPSVGL
LISDTFADNTFGILADVIYTRHDTRTNNVYVHGFPGGFYAPCQLQGSTATVCNPTDDT
TADPSQVKSVVGFFEQQYGAQQTYTKDERIDGRIALQWRPSDDILLTLDDNYTEQRIN
SNTFGFGIWFNQGSLRNVVLDDNGVPLDFTQAGSQTDFTAERASNLRRTNQTGLNVKW
NVSDNFEVEADGSFSKSWLNPDGRISSRGADIGYGFGIGPTLGISIDGNSSGAFPSLH
DYGANGDPSRWADTSVIGSHVTVNIANKNTDTIKQARLSGKWTQDDLTLTFGGTYLDD
TFKFRSANTFGNNFWQAYSGYGPASGTSGGVAIPLDLYNGMVGTGGFIPGFDGMLPPT
LINFNAVDYQNFLTSLGNPQAGNIPGYNYGCCNGDFTGTFDVADDVGSYRNISEKTWS
LFLKARFETELAGMPFTFTAGMRQETTHLSSSGLGRLPLSITPSTTDPTLLTVNFGPV
QPVTTKNNYSYFLPAVDVKLEVMPDLVLRFDASRTLTRPTLNLLTPVLNIGTGQRIGA
LTADGGNPTLKPYLSDNFDLAAEWYYQRNSYFAVNLFLKNVSNFIVQGTQRQTINGVV
DPSTGQPAQFTVSQRLNGPDATVRGIELALQHTFGDSGFGFIANATFVDTNKPYDRSD
ISQSGFAVTGLANSANFVGFFDKYGFEFRAALNWRDEYLLQFGQVQNTGAFGAEPTFV
NASTQIDLSTSYQITEGLNVFGEILNLTNETQSTHGRYKNQLLDVYGYGRRFTAGVRY
RF"
misc_feature complement(89777..92524)
/locus_tag="PP1Y_Mpl929"
/note="TonB-dependent receptor; Region: TonB-Xanth-Caul;
TIGR01782"
/db_xref="CDD:162534"
misc_feature complement(<91436..92458)
/locus_tag="PP1Y_Mpl929"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
misc_feature complement(89777..91462)
/locus_tag="PP1Y_Mpl929"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene 93036..93728
/locus_tag="PP1Y_Mpl954"
/db_xref="GeneID:10718724"
CDS 93036..93728
/locus_tag="PP1Y_Mpl954"
/inference="similar to AA sequence:UniProt:B0SVR7"
/note="KEGG: cak:Caul_2408"
/codon_start=1
/transl_table=11
/product="SapC family protein"
/protein_id="YP_004538050.1"
/db_xref="GI:334144841"
/db_xref="GeneID:10718724"
/translation="MADQLVALNSHEHRSLRLRQRHSEAAHFTEIMPSEFAGAAASCP
ILLAKSPETGAFYVGAMFGFKPGENLLSDHRDGAAPTYRTLDQQREGFYVSEDEIAID
PTCPRFSEYEGELLFDMDGRPATPLRHIRRVLTQLVTGKHESETFTATLLRLKLIEPI
DISLNFDDGEKLVLQGLYTVSLDTVNELEDSAVLDLFRKGYLQLIYTMVGSLKHVSAL
AHIRNHRLSRAA"
misc_feature 93057..93689
/locus_tag="PP1Y_Mpl954"
/note="SapC; Region: SapC; pfam07277"
/db_xref="CDD:148720"
gene 93734..94753
/locus_tag="PP1Y_Mpl960"
/db_xref="GeneID:10718747"
CDS 93734..94753
/locus_tag="PP1Y_Mpl960"
/inference="similar to AA sequence:UniProt:Q1NHS9"
/note="KEGG: cak:Caul_2409"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538051.1"
/db_xref="GI:334144842"
/db_xref="GeneID:10718747"
/translation="MPEESVAEISREEISGPEAFQRNVIEPCQPVILRKGCADWPAHR
VATKSDRDLREYLCAFDNGQPAMAFVGDTSIAARYHYGSHRDGFNFECETMAIGPALD
RIAQCAENPSLGSVYLGSLPAEVHLPGFAEENVLPLVPPTARPRVWIGNASTVACHYD
TFDNVACVVAGRRTFTLFPPEAVSDLYVGPIDHTMAGQPVSLATGSSREDPQYPRFEA
IRDRALVVELEPGDALYLPKLWWHQVEAQGDLNLLVNYWWDAFAAGPDAPFTTMMLAM
IAIAERPAPERAAWRAFFDHYVFRPNGHPLAHLPAEQHGILGPLDKGNYGRIRAMVMQ
LLRGS"
misc_feature 93782..94525
/locus_tag="PP1Y_Mpl960"
/note="Cupin-like domain; Region: Cupin_8; pfam13621"
/db_xref="CDD:205799"
gene complement(94831..96921)
/locus_tag="PP1Y_Mpl971"
/db_xref="GeneID:10718752"
CDS complement(94831..96921)
/locus_tag="PP1Y_Mpl971"
/EC_number="3.2.1.55"
/inference="protein motif:COG:COG3534"
/inference="similar to AA sequence:UniProt:B0SVR9"
/note="KEGG: cak:Caul_2410"
/codon_start=1
/transl_table=11
/product="alpha-N-arabinofuranosidase"
/protein_id="YP_004538052.1"
/db_xref="GI:334144843"
/db_xref="GeneID:10718752"
/translation="MRIALNGACTGLVLALGASIALPATIRAQTPDTVSATIDARNRS
EPVTRHAYGMFIEPIGGLVARSIWAEMLDDRKFYYPVVTAAKDVPPPPNPEGRPGVTY
RKWRPIGNDGAVEMDTSDPFVGKQSPKVVVQGKEVRGLGQSGISIAAGKRYVGHFWLS
GDPGVKVQVALVWGKGRADRMVVALQAPRRGWQKAEFAFSPNTDASDARLEITGTGSG
TFRVDAISLMPDDNIDGWRADTTAIARSLNSGMWRLPGGNFLSDWDWHGALGPRDKRA
PIFDHAWSAMQPNDLGMDEWMKLTQILGVDPYVTVNAGLGDAHSAAEEVEYLNGPATS
EWGARRAANGHPKPYAVKYWNIGNEPYGWWQIGRTTLDYFMIKHNRFAEAMRAVDPSI
VLIGSGAMPDQLKPRDTKENPSLESIRHKFGTEEDWTGGLFAKAWGNFDGVSEHWYDS
AEKRPDAPADAELMEYARSPSNQVRMKAEIWDIYRQWFPRIDKDHIFLSIDEYAYFGG
ANLKSALAYAMVMQEMLRHTDFLKMSAFTTGASTMDITATDSVLNSTGLVFKLYGEHF
GEGTVPLAVTGNSPQPEPRYPVGYDHPQVRAGSPTYPLDIIAALGPDGKSLRIGLVNA
TFQKQSADLSFKGLSIAGAGERWVLTGKSVDAANKVGATPQVTITSSQAMPYQGALSV
PPISIVVYEFPLRN"
misc_feature complement(94855..96237)
/locus_tag="PP1Y_Mpl971"
/note="Alpha-L-arabinofuranosidase [Carbohydrate transport
and metabolism]; Region: AbfA; COG3534"
/db_xref="CDD:33336"
misc_feature complement(94864..95421)
/locus_tag="PP1Y_Mpl971"
/note="Alpha-L-arabinofuranosidase C-terminus; Region:
Alpha-L-AF_C; pfam06964"
/db_xref="CDD:203553"
gene 97293..98333
/locus_tag="PP1Y_Mpl999"
/db_xref="GeneID:10718764"
CDS 97293..98333
/locus_tag="PP1Y_Mpl999"
/inference="similar to AA sequence:UniProt:B0SVS0"
/note="KEGG: cak:Caul_2411"
/codon_start=1
/transl_table=11
/product="putative esterase"
/protein_id="YP_004538053.1"
/db_xref="GI:334144844"
/db_xref="GeneID:10718764"
/translation="MVSTALALASVALPGHAQVQTLVPTPVAGAKPATVERIKVHSIA
IEGNLEGESADRDVVVILPPSYGKEPSRRYPVVYALHGYSIGAEQWMKEIHVPQTVEG
AFAEGAAEMIVVLPDSKTAYNGSMYSSSQTTGDFETFVSRDLVGYVDSHYRTLRDRRS
RGLVGHSMGGYGATRIGLKHADVFGALYLMSPCCLSVRDPQSFEPDLEAKVAQLRMPA
DSEDLSFGPRGALAMAAAWSPNPRNPPLYLDLPVKDGTARPEIIAKWMANSPLAFADQ
YIDNLRKYAAIAMDVGDQDGLKVDTRKLHALFDSYGIANSLEIYPGTHTSAVADRFQN
HVMPFFSAHLAH"
misc_feature 97458..>97868
/locus_tag="PP1Y_Mpl999"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature 97467..98327
/locus_tag="PP1Y_Mpl999"
/note="Predicted esterase [General function prediction
only]; Region: COG0627"
/db_xref="CDD:30972"
gene 98362..99909
/locus_tag="PP1Y_Mpl1013"
/db_xref="GeneID:10718786"
CDS 98362..99909
/locus_tag="PP1Y_Mpl1013"
/inference="protein motif:COG:COG3507"
/inference="similar to AA sequence:UniProt:B1ZT63"
/note="KEGG: cak:Caul_2413"
/codon_start=1
/transl_table=11
/product="glycoside hydrolase family protein"
/protein_id="YP_004538054.1"
/db_xref="GI:334144845"
/db_xref="GeneID:10718786"
/translation="MRLTILAAAAALCSCTFSRTPAMAQVWQADQGDGTFRNPVLYAD
YPDPDIIRVGEDFYFATTTFVNTPGITILHSKDLVNWEFYSHVVQRIDGSPAYDLKGG
NGYRRGLYATSLRHHRGMFYLAVTPVGLNTRIYYAPDPRGPWQYHELNREAFDPGLFI
DDDGTGYIATAVNSDGTITLLTLDRDFDRIVGSRKIHFVPGGEGSKIVKRDGWYYIFN
AVPPRMALTVSRSRSLFGPWETREQIDDRTGGHQGALVDLPDGRWFGFVMADAGSIGR
MTNLSPVFWKDDWPIWGTPEEPGKVPGQARKPIDGFAPSQLAASDGFTHARLGMQWQW
NHNPDDSAWSLNERPGWLRLHAMLADNLWSARNTLVQKAQGPRSRAVVKLDIAGLQKG
DRCGFGTFGQYSATIAASRDPKGRPFLTMGLLESTQSGPREEVKVAGTAIAGSELWLS
VNADFTRDKASMAYSLDGKDWVPLGGTFPLAFAWRTGTFQGEQFALSCFNTQGEGGFL
DIDSFIL"
misc_feature 98446..99900
/locus_tag="PP1Y_Mpl1013"
/note="Beta-xylosidase [Carbohydrate transport and
metabolism]; Region: XynB; COG3507"
/db_xref="CDD:33310"
misc_feature 98464..99240
/locus_tag="PP1Y_Mpl1013"
/note="Glycosyl hydrolase family 43, beta-D-xylosidase;
Region: GH43_XYL_2; cd09001"
/db_xref="CDD:185742"
misc_feature order(98500..98502,98824..98826,98968..98970)
/locus_tag="PP1Y_Mpl1013"
/note="active site"
/db_xref="CDD:185742"
gene 99924..101816
/locus_tag="PP1Y_Mpl1025"
/db_xref="GeneID:10717827"
CDS 99924..101816
/locus_tag="PP1Y_Mpl1025"
/EC_number="3.2.1.22"
/inference="similar to AA sequence:UniProt:B0T4F0"
/note="KEGG: cak:Caul_2412"
/codon_start=1
/transl_table=11
/product="alpha-galactosidase"
/protein_id="YP_004538055.1"
/db_xref="GI:334144846"
/db_xref="GeneID:10717827"
/translation="MKRGFRLLGAVAILALTVTAAHADELDPKGDWTAYDKGNAALPP
MGWNSWNAFALEINEAKILGAAETIVTSGLAAKGYRYVDLDEGWWARRGADGRLVIRT
DRFPSAIRSDGTTSFRPLTDKLHDMGLKAGIYSEIGRNSCGQIYSEEKASLPSGTVAE
REVGLYDHVDRDIGLYFAEWGFDLIKVDGCGIRGLPQGSPRVASGEFRAFPPLIDSDS
LGRTNIPAVRALFGKVADALERYNPDNDFVFSLCIWGSADVRSWAKNVGNLSRTSEDI
FPIWGRMLFNMDSTSRRALYAQPGSWNDPDMLYIGSGEFDADHLTEARTHFSMWAMLN
APLIIGYDLRHAAPELMEILGNERIIALDQDPAGNQAVLAYDSDDVQIYAKTLADGTK
GVAILNRTSAPLDAVLTAEHLKFLAGADVELTDLWTGETTRFKGEHKFTLAPREALVF
KAKGKRVLADGYYLSEMPGSVNPAVDGVTVPQAEPMTHRAILPWQSTHGNGEHPRYGG
WGGAQADATPYGEELAVSGQRYQNGIGVLANSRLEIRNAGYKHFSAEVGVDDSARDRS
EPVTFLVYGDGRLLARSEPKRFGEAPSTIKADVSGAKLVEIVARTATPVRFPDPVTWG
NAALTH"
misc_feature 100029..101216
/locus_tag="PP1Y_Mpl1025"
/note="The enzymes of glycosyl hydrolase family 31 (GH31)
occur in prokaryotes, eukaryotes, and archaea with a wide
range of hydrolytic activities, including
alpha-glucosidase (glucoamylase and sucrase-isomaltase),
alpha-xylosidase, 6-alpha-glucosyltransferase; Region:
GH31; cl11402"
/db_xref="CDD:209304"
misc_feature 101397..101810
/locus_tag="PP1Y_Mpl1025"
/note="NPCBM/NEW2 domain; Region: NPCBM; pfam08305"
/db_xref="CDD:191993"
gene complement(101868..103418)
/locus_tag="PP1Y_Mpl1049"
/db_xref="GeneID:10717835"
CDS complement(101868..103418)
/locus_tag="PP1Y_Mpl1049"
/EC_number="3.2.1.55"
/inference="protein motif:COG:COG3534"
/inference="similar to AA sequence:UniProt:B0SVS4"
/note="assigned by KAAS to KEGG Orthology:K01209
alpha-N-arabinofuranosidase"
/codon_start=1
/transl_table=11
/product="alpha-N-arabinofuranosidase"
/protein_id="YP_004538056.1"
/db_xref="GI:334144847"
/db_xref="GeneID:10717835"
/translation="MSLAQAASAASDDDVIPVEVEADKTGATIDRNVFGQFAEHLGYG
IYGGVWVGKDSKIPNVRGIRKDVVSALKAIKVPNVRWPGGCFADEYHWRDGIGPQSAR
RATVNANWGDSGEPNTFGTDEFMDFVSQIDSEAYISVNVGSGTVQEAADWLAYMTAPA
SSAAGKERAANGHPEPYKVRYLGLGNESWSCGGAMRPEYYADLMKRYARFVRNYRPEQ
MEKGAAPMQRIAVGPNGPDTAYTEQVMKTWTQHDWAWNIEGLSLHSYTTGGWPPSMSS
TDFGRDAYASLVKETLGMDAMIASHSAIMDKYDPDKKVPLVVDEWGVWLEPAPGTNPG
FLIQQNSLRDAIIAALNLNIFARHADRVRMTNIAQMVNVLQAMILTQDEKMLLTPTYY
IYKMYVPFQDARFVPVNFDAGTYREGSVELPRVDAIAARGRNGKLWLSVTNLDPSRKA
TISASFDGLTIKALAGEVLTGPKVNSINSFDSPDVVVPRPISGTVRNNKVTVDLPAKS
VAVFRLDE"
misc_feature complement(101874..103361)
/locus_tag="PP1Y_Mpl1049"
/note="Alpha-L-arabinofuranosidase [Carbohydrate transport
and metabolism]; Region: AbfA; COG3534"
/db_xref="CDD:33336"
misc_feature complement(101895..102464)
/locus_tag="PP1Y_Mpl1049"
/note="Alpha-L-arabinofuranosidase C-terminus; Region:
Alpha-L-AF_C; pfam06964"
/db_xref="CDD:203553"
gene 103688..105103
/locus_tag="PP1Y_Mpl1065"
/db_xref="GeneID:10717860"
CDS 103688..105103
/locus_tag="PP1Y_Mpl1065"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:Q2RYP5"
/note="assigned by KAAS to KEGG Orthology:K08139 MFS
transporter, SP family, sugar:H+ symporter"
/codon_start=1
/transl_table=11
/product="MFS transporter SP family sugar:H+ symporter"
/protein_id="YP_004538057.1"
/db_xref="GI:334144848"
/db_xref="GeneID:10717860"
/translation="MNDSGQDNVRMSLVGAIVAVATIGGLLFGYDSGAVNGTQAGLRD
AFALDDAGLGFTVGSLLIGCAAGAFLAGRLADAMGRKRVMMISAVIFLIGALIQGLTP
DHTIFVIARFAGGMAVGAASVLSPAYISEVAPAHMRGRLTSVQQVMIITGLTLAFVVN
YFLAQAAGDSLGMIGGHPAWRWMYLAQSVPAAVYLIALFTIPESPRYLVSRKRDTEAE
AILARLFGAFSASAKVKEIRASFSHDHRPRLRDVMAPGTILRPIVWAGLVLAVFQQLV
GINVIFYYGETLWKLAGASEETALQRNIVSGIVSIAACFVAMGLVDRIGRKPLLLIGS
AGMTVTLGTMTWVFTSGTLDVAGNLVLDQSIGLVALVAANLYVIFFNVSWGPVMWVML
GEMFPNQLRGSALAVCGLAQWAANYAVVQSFPGMASGLGLGLTYAFYTICAAISFFLV
RSFINETRGKELEEMEGWDER"
misc_feature 103733..105100
/locus_tag="PP1Y_Mpl1065"
/note="D-xylose transporter XylE; Provisional; Region:
xylE; PRK10077"
/db_xref="CDD:182225"
misc_feature 103739..>104293
/locus_tag="PP1Y_Mpl1065"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(103781..103783,103790..103798,103802..103807,
103856..103858,103865..103870,103877..103879,
103889..103894,103898..103903,104039..104044,
104051..104056,104063..104068,104075..104077,
104111..104116,104123..104128,104144..104146)
/locus_tag="PP1Y_Mpl1065"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature <104441..105049
/locus_tag="PP1Y_Mpl1065"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene 105381..106490
/locus_tag="PP1Y_Mpl1086"
/db_xref="GeneID:10717877"
CDS 105381..106490
/locus_tag="PP1Y_Mpl1086"
/inference="protein motif:COG:COG1609"
/inference="similar to AA sequence:UniProt:C0INK0"
/note="assigned by KAAS to KEGG Orthology:K02529 LacI
family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LacI family transcriptional regulator"
/protein_id="YP_004538058.1"
/db_xref="GI:334144849"
/db_xref="GeneID:10717877"
/translation="MAKDDATSRKKRGNRKQLGRPTIADVARLAGCSPMTVSRVINHE
ASVREDTRKVVQAAIEQLNYSPNRAARSLAGASQLRIALLYTNPSASYLSEFLMGCLE
EASHSDVHLVVERCAFGEDEDEVIRRLTKSGIDGFLLPPPLSDEKPLLELLRQLDSRA
VLVGPGTAEADDWAVMIDEYQAAYDMTNHIIGLGHKRIGFVIGNPHQTASGQRLSGYL
DAMAAAGLDVPESLVRQGLFTYRSGIDAAMYLLDQPDPPTAIFASNDDMAAAAVAVAQ
RRHLDVPLDLTVCGFDDTPIASTIWPELTTIRQPIHEMASTALEMLATELRAERSGKA
GVPVHLKLDYSIVRRQSDNAPGLARRAMRGSRQEE"
misc_feature 105441..106448
/locus_tag="PP1Y_Mpl1086"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:31797"
misc_feature 105450..105605
/locus_tag="PP1Y_Mpl1086"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature order(105450..105452,105474..105488,105492..105497,
105504..105506,105519..105524,105531..105533,
105570..105572,105579..105581,105588..105593,
105597..105602)
/locus_tag="PP1Y_Mpl1086"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature 105570..105599
/locus_tag="PP1Y_Mpl1086"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature 105618..106433
/locus_tag="PP1Y_Mpl1086"
/note="Ligand-binding domain of DNA transcription
repressor SalR, a member of the LacI-GalR family of
bacterial transcription regulators; Region: PBP1_SalR;
cd01545"
/db_xref="CDD:107258"
misc_feature order(105618..105620,105657..105665,105672..105677,
105681..105686,105705..105719,105723..105725,
105753..105755,105762..105764,105771..105779,
106101..106103,106185..106187,106197..106199,
106206..106211)
/locus_tag="PP1Y_Mpl1086"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:107258"
misc_feature order(105654..105659,105666..105668,105798..105800,
105870..105872,105909..105911,106017..106019,
106092..106094,106254..106256,106305..106307)
/locus_tag="PP1Y_Mpl1086"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107258"
gene complement(106536..108383)
/locus_tag="PP1Y_Mpl1098"
/db_xref="GeneID:10717895"
CDS complement(106536..108383)
/locus_tag="PP1Y_Mpl1098"
/EC_number="3.1.1.53"
/inference="similar to AA sequence:UniProt:Q1NHS8"
/note="KEGG: xca:xccb100_4308"
/codon_start=1
/transl_table=11
/product="exported putative sialate O-acetylesterase"
/protein_id="YP_004538059.1"
/db_xref="GI:334144850"
/db_xref="GeneID:10717895"
/translation="MPALAAPALSPYWTDHAVIQRGKPIAVEGRADPGERVSGSLGDE
SSEAVAGSDGYFTLKFKAHEASRSPLTLTVGNRQVRDLLVGDVWLCSGQSNMAFMVKQ
GLNAATEIASSADDGLRLLRVPDGSAVSPQARFSTPAQWAAAAPDTVRDFSAACYFMA
RELRATLGVPVGVINSSYGGSQIRVWLTPESGKALYGAEQMDMLRSFGSDELGTVARF
APTWENWYLQHSGGTAPWVKPDSLQWQPVPQISVWNEWKGSPLVESPIGTVWLRREVD
LTPAQAKGGAKLSLGVIDEIDMTWVNGHPVGNTFGWDVERNYEVPARFLKPGRNEIIV
AATNTWSTGGFTSPADKLSLTPAGGAAVPLADGWRYSKAPMKELPPRSPWDTNAGIGV
RHNAMVAPLGHVALKGAAWYQGESDVDLPGYRDRMRELFAGWRKQFSSDMRMLVVQLA
NYGPVQLAPTNSGWADLREEQRQSVLADKNAELVTAIDIGERTDIHPANKQVLGHRLA
LAAQGIALPEPVNAMRDGENVRVRFAGVAGKLVAWSASSPLAFELCGDTQSTCRYAAA
RVDGASVLLADDGKPATRVRYAWADSPVVNAYDDKAMPLPGFELDIASR"
misc_feature complement(<107811..108131)
/locus_tag="PP1Y_Mpl1098"
/note="Domain of unknown function (DUF303); Region:
DUF303; pfam03629"
/db_xref="CDD:202706"
misc_feature complement(107271..107735)
/locus_tag="PP1Y_Mpl1098"
/note="Glycosyl hydrolases family 2, sugar binding domain;
Region: Glyco_hydro_2_N; cl08371"
/db_xref="CDD:208893"
misc_feature complement(106848..>107273)
/locus_tag="PP1Y_Mpl1098"
/note="Domain of unknown function (DUF303); Region:
DUF303; pfam03629"
/db_xref="CDD:202706"
gene complement(108425..109312)
/locus_tag="PP1Y_Mpl1116"
/db_xref="GeneID:10717904"
CDS complement(108425..109312)
/locus_tag="PP1Y_Mpl1116"
/inference="protein motif:COG:COG3386"
/inference="similar to AA sequence:UniProt:Q1NAK1"
/note="KEGG: pzu:PHZ_c2467"
/codon_start=1
/transl_table=11
/product="gluconolactonase"
/protein_id="YP_004538060.1"
/db_xref="GI:334144851"
/db_xref="GeneID:10717904"
/translation="MAVSGPVSLAFDAGAMLGEGPVWDTARQCLWFVDIKGHAVWRFD
PEGGTSRRIDAPDQVGWVLPTSAGRLLAGLKSGLHLIDPHPGHFEKTATVPGEPADNR
LNDACTDRAGRVWFGSMDDGEQQETGRFYRYERGSIVAVGPTGVTITNGPAVNGNADL
VYFADTLGRKIYVAELGEDGLPGAPRLFADIAQDFAEAYPDGPVVDAEGCVWTGLWNG
WAVARYSPEGRLLETVPLPVANVTKLAFGGADLRSAFVTTARKGLDGAALEAQPQAGG
LFTFRSEVAGLATTPVEMK"
misc_feature complement(108533..109264)
/locus_tag="PP1Y_Mpl1116"
/note="SMP-30/Gluconolaconase/LRE-like region; Region:
SGL; pfam08450"
/db_xref="CDD:192042"
gene complement(109303..110085)
/locus_tag="PP1Y_Mpl1126"
/db_xref="GeneID:10717920"
CDS complement(109303..110085)
/locus_tag="PP1Y_Mpl1126"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:Q13FC8"
/note="KEGG: mrd:Mrad2831_5401"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538061.1"
/db_xref="GI:334144852"
/db_xref="GeneID:10717920"
/translation="MADKANVEARHAIYPSLSGKRVIVTGGASGIGEGMVEAFTLQGA
QVTFLDIQEEASLALVKRLANAPFKPDFELCDITDIEAFGQVLDRMLTSLGGCDVLIN
NAGNDDRHAIEDITPDYWDERMAVNLRHQFFAAKAVIPAMKAAGSGSIINLGSISWHL
GLEDLVIYQTAKAAIEGLTRSLARELGRSGIRVNSVIPGNVQTPRQMQWYSPEGEAEI
VAAQCLDGRIQPQDIAAMALFLASDDGRFCTSHNYWVDAGWR"
misc_feature complement(109309..110040)
/locus_tag="PP1Y_Mpl1126"
/note="short chain dehydrogenase; Provisional; Region:
PRK12939"
/db_xref="CDD:183833"
misc_feature complement(109318..110022)
/locus_tag="PP1Y_Mpl1126"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(109474..109479,109483..109494,
109570..109572,109582..109584,109621..109629,
109708..109710,109771..109779,109855..109863,
109930..109938,109993..110004,110008..110010))
/locus_tag="PP1Y_Mpl1126"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(109570..109572,109582..109584,
109621..109623,109705..109707))
/locus_tag="PP1Y_Mpl1126"
/note="active site"
/db_xref="CDD:212491"
gene complement(110213..111337)
/locus_tag="PP1Y_Mpl1134"
/db_xref="GeneID:10717928"
CDS complement(110213..111337)
/locus_tag="PP1Y_Mpl1134"
/inference="protein motif:COG:COG3970"
/inference="similar to AA sequence:UniProt:C0INJ0"
/note="KEGG: pzu:PHZ_c2470"
/codon_start=1
/transl_table=11
/product="fumarylacetoacetate (FAA) hydrolase family
protein"
/protein_id="YP_004538062.1"
/db_xref="GI:334144853"
/db_xref="GeneID:10717928"
/translation="MPDNLVDILPADFREGLFAGRAESECGPHVIAIRNGELFDITEQ
VATMSGAVARRSFSGGRHIGAVQDGLPEGWRLISPVDLQCIKACGVTFALSAIERVIE
ERARGDAAKAAEIRDLLEERVGSGIRSVVPGSDEAMALKTALIDQGMWSQYLEVAIGP
DAEVFSKSPVLSTVGHGALIGVRSDSSWNNPEPEVVLVADASGTVVGATLGNDVNLRD
FEGRSALLLSKAKDNTASCSIGPFIRLFDDGFTIDDVRSANVDLLIEGTDGYRLEGTN
RMSEISRDPLDLVNQTLSEHHYPDGFVLFCGTLFAPTQDRDTPGGGFTHKLGDKVTIR
SEKLGSLSNVVTTSREAPPWTMGIAALMRNLAARGLIEKV"
misc_feature complement(110225..111316)
/locus_tag="PP1Y_Mpl1134"
/note="Fumarylacetoacetate (FAA) hydrolase family protein
[General function prediction only]; Region: COG3970"
/db_xref="CDD:33751"
misc_feature complement(110300..110875)
/locus_tag="PP1Y_Mpl1134"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; pfam01557"
/db_xref="CDD:201859"
gene complement(111430..113145)
/locus_tag="PP1Y_Mpl1147"
/db_xref="GeneID:10717935"
CDS complement(111430..113145)
/locus_tag="PP1Y_Mpl1147"
/EC_number="3.2.1.37"
/inference="protein motif:COG:COG3507"
/inference="similar to AA sequence:UniProt:B8H1Q9"
/note="assigned by KAAS to KEGG Orthology:K01198 xylan
1,4-beta-xylosidase"
/codon_start=1
/transl_table=11
/product="xylan 1,4-beta-xylosidase"
/protein_id="YP_004538063.1"
/db_xref="GI:334144854"
/db_xref="GeneID:10717935"
/translation="MPRAIHDFGERDKKESNVIRSRYLILAMAAASLPGAIAAQPVAH
VAEVEYQAGPQPDTAPGEFRNPVLPGFQPDPSLVKVGKDFYLVNSTFAWFPGIPIYHS
RDLVNWRQIGNAIDRPGMFSFKGMRTNDAVFAPAISHYGGKFRILDTCVRCGGNFMLV
ADRPEGPWSDPVWLDFEGIDPSLFVDEDGSAWVVNNGAPEGEPRYEGHRAIWIQRIDL
ASGKMFGPRKVLVDGGVHPEDKPIWAEGPHIFKHDGWYYLTAAEGGTAEDHSQTIYRS
RQADGPYEAGPVNPILTQRDLPADRPSRVEATGHADFVSLDDGSWWAVFLATVPFEGQ
STLLGRETFLLPVTWKNGWPLILPKGAAVPLTAKRPALATDGKVDLTHWRDTFAGLEL
AAQWLQLRDPSGPPWYRIDNGLDLTARPVAPGSLDGQPAFLGRRLRQQTARVSAQIAF
TPERDDDYAGLMAFMNEDHFISIGITRVEGQQRIALRERRSADQPESGVTVASMPLSD
GGPVEFAISLDRGTADFAWRPAGQGDWRYLVRGQNVEHMASVHGGLFTGTVIGPFAQQ
ASTNQ"
misc_feature complement(111436..112977)
/locus_tag="PP1Y_Mpl1147"
/note="Beta-xylosidase [Carbohydrate transport and
metabolism]; Region: XynB; COG3507"
/db_xref="CDD:33310"
misc_feature complement(112078..112953)
/locus_tag="PP1Y_Mpl1147"
/note="Glycosyl hydrolase family 43, beta-D-xylosidase;
Region: GH43_XYL_1; cd09000"
/db_xref="CDD:185741"
misc_feature complement(order(112126..112128,112216..112218,
112351..112356,112411..112413,112606..112611,
112744..112749,112873..112875,112924..112926))
/locus_tag="PP1Y_Mpl1147"
/note="inhibitor binding site; inhibition site"
/db_xref="CDD:185741"
misc_feature complement(order(112411..112413,112606..112608,
112924..112926))
/locus_tag="PP1Y_Mpl1147"
/note="active site"
/db_xref="CDD:185741"
gene complement(113126..115222)
/locus_tag="PP1Y_Mpl1169"
/db_xref="GeneID:10717948"
CDS complement(113126..115222)
/locus_tag="PP1Y_Mpl1169"
/inference="protein motif:COG:COG3661"
/inference="similar to AA sequence:UniProt:A9EV23"
/note="KEGG: pzu:PHZ_c2475"
/codon_start=1
/transl_table=11
/product="alpha-glucuronidase"
/protein_id="YP_004538064.1"
/db_xref="GI:334144855"
/db_xref="GeneID:10717948"
/translation="MLLFVSLCAIQAGPARAEDGYALWLRYAPLDEATASAVNARLGT
PELLGKSSPITQAAQAELARGLGAMLGQSGKGKAPVLARAGRLFGQDAGLARQLAGLP
SGAYRIALGHDGRVVIAANDDIGLLYGSFALLRHVASGEDLDAIDLTSAPALPLRMLD
HWDDPDGFVERGYAGRSIFDWWLLPDHLDPRLIDYARANASVGINGVVVNNVNASPLM
LTPRYIEKLARLANAWRPFGIRVFLSARFSAPRDLGGLTTADPLDPQVRRWWKEKADE
IYTSIPDFGGFLVKANSEGQPGPQDYGRTHADGANMLAQALGSRGTVIWRAFVYASGS
EADRVKLAYEEFKPLDGKFADNVILQVKNGPLDFQPREPFHPLFGAMPHTRMMLEAQI
TKEYLGLATHLAFLAPLWTETLDADTGHGKGNRTLSVAQTLAQGGMAGVANTGSDRNW
TGGHFDQANWYAFGRLAWYPELTADTIAREWAAQTFSRDPAFTVPLAEMMVGSRQTVV
DYMTPLGLAHQMGTGHHYGPAPWVSDLSRPEWNPTYYNRADKSGIGFDRMATGSNALA
QYAPSVAAQWADPATGNEDYLLWFHHLPWEFRTRSGSTLWAELVARYDRGVAGVDAMA
AQWAELSPYVDAQRHRDVAQFLAIQKREARWWRDASIAYFSTVCGCPLPSGARPPAHG
LDWYEALRFPDAPGNP"
misc_feature complement(113210..115180)
/locus_tag="PP1Y_Mpl1169"
/note="Alpha-glucuronidase [Carbohydrate transport and
metabolism]; Region: AguA; COG3661"
/db_xref="CDD:33459"
misc_feature complement(114824..115156)
/locus_tag="PP1Y_Mpl1169"
/note="Glycosyl hydrolase family 67 N-terminus; Region:
Glyco_hydro_67N; pfam03648"
/db_xref="CDD:202718"
misc_feature complement(113180..113872)
/locus_tag="PP1Y_Mpl1169"
/note="Glycosyl hydrolase family 67 C-terminus; Region:
Glyco_hydro_67C; pfam07477"
/db_xref="CDD:203642"
gene 115410..116498
/locus_tag="PP1Y_Mpl1190"
/db_xref="GeneID:10717969"
CDS 115410..116498
/locus_tag="PP1Y_Mpl1190"
/EC_number="3.2.1.37"
/inference="similar to AA sequence:UniProt:Q1N869"
/note="KEGG: dfe:Dfer_0795"
/codon_start=1
/transl_table=11
/product="xylan 1,4-beta-xylosidase"
/protein_id="YP_004538065.1"
/db_xref="GI:334144856"
/db_xref="GeneID:10717969"
/translation="MRRSHVLFIRTAILAGAAAAIAGCSKPEEAPKAQETDKYIAQPL
VTEIFTADPSAHVFDGKLYIYPSHDIDTGIPDDDLGNQYAMRDYRVLELDKPGGKVAI
GPVALDVDDVPWASKSMWAPDAAYKNGTYFLYFPAKDKDGIFHIGVATSDNPMGPFKA
EPEPIKSSFSMDPAVFTDDDGTSYMYFGGIWGGQLQKWARGKYDPSIGDVDLKQDDKP
ALMPKVAKMAPDMKEFAEAPRDAVILDTGGKPVLGGDHDKRFFEASWMYKRGGKYYFT
YSTGDTHFLNYAIGENPYGPFTYTGHILLPVQGWTSHHSIVDWDGKTWLLFHDTQLSG
KNHLRNVKMTELHFNADGTIRTIDPFKH"
misc_feature 115560..116477
/locus_tag="PP1Y_Mpl1190"
/note="Glycosyl hydrolase family 43, includes arabinoxylan
arabinofuranohydrolase, beta-xylosidase,
endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase;
Region: GH43_AXH_like; cd08990"
/db_xref="CDD:185731"
misc_feature order(115563..115565,115767..115769,115920..115925,
116193..116195,116340..116342,116424..116426)
/locus_tag="PP1Y_Mpl1190"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:185731"
misc_feature order(115563..115565,115923..115925,116193..116195)
/locus_tag="PP1Y_Mpl1190"
/note="active site"
/db_xref="CDD:185731"
gene complement(116680..118491)
/locus_tag="PP1Y_Mpl1203"
/db_xref="GeneID:10717971"
CDS complement(116680..118491)
/locus_tag="PP1Y_Mpl1203"
/EC_number="4.2.1.9"
/inference="protein motif:COG:COG0129"
/inference="similar to AA sequence:UniProt:A4YSM9"
/note="assigned by KAAS to KEGG Orthology:K01687
dihydroxy-acid dehydratase"
/codon_start=1
/transl_table=11
/product="dihydroxy-acid dehydratase"
/protein_id="YP_004538066.1"
/db_xref="GI:334144857"
/db_xref="GeneID:10717971"
/translation="MTNQNPPKAPSAKLRSRAWFDNPDNIDMTSLYLERYLNFGLSLE
ELRSGKPIIGIAQTGSDLSPCNRHHIVLAERIREGIREAGGIAIEFPVHPIQETGKRP
TAGLDRNLTYLGLVEALYGYPIDGVVLTTGCDKTTPALLMAAATVNIPAIALSVGPML
NGWHKGERTGSGTIVWKGRQMLAAGELDDEGFIKLVASSAPSTGYCNTMGTATTMNSL
AEALGMMLPGSAAIPAPYRDRQECAYHTGKRVVEMVHEDLKPSDILTLEAFHNAIAVN
AAIGGSTNAPIHLAAIARHIGVDLPLKDWERIGHKIPLLVNLQPAGEYLGEDYYRAGG
VPAVVAQLIKQGLINEGAMTVNGRTMGDNCRNATIEDERVIKTFDQPLVEEAGFLVLS
GNLFDAAIMKTSVISAEFRERYLSNPADPDAFEGPVVVFDGPEDYHHRIDDPATGITS
ETLLFMRGAGPIGYPGAAEVVNMRPPAYLITEGISALPCIGDGRQSGTSGSPSILNAS
PEAAAMGGLALLRTGDRVRIDLGKGSVNVLISDEELAQRRADLEASGGYPYPASQTPW
QEIQRSIVGQMDTGAILEGSEKYQRIAQTMGLPRDNH"
misc_feature complement(116683..118482)
/locus_tag="PP1Y_Mpl1203"
/note="dihydroxy-acid dehydratase; Provisional; Region:
PRK13017"
/db_xref="CDD:183843"
gene complement(118507..119610)
/locus_tag="PP1Y_Mpl1219"
/db_xref="GeneID:10717972"
CDS complement(118507..119610)
/locus_tag="PP1Y_Mpl1219"
/EC_number="5.1.3.3"
/inference="protein motif:COG:COG2017"
/inference="similar to AA sequence:UniProt:B0T7Y2"
/note="assigned by KAAS to KEGG Orthology:K01785 aldose
1-epimerase"
/codon_start=1
/transl_table=11
/product="aldose 1-epimerase"
/protein_id="YP_004538067.1"
/db_xref="GI:334144858"
/db_xref="GeneID:10717972"
/translation="MATGLCPSAHAAEAKREIAGALADGTEVSAITLKADNGISATIL
SYGATLQKLLAPDNHGKIADVVLGYDTLSDYVEHPNYFGVTVGRYANRIAGGRFTLDG
KTYQLPLNDDHNSLHGGGHGFDKVAWQVVSVKSGPTASVVLSHVSPDGDAGYPGKVVS
TVTYTLDEAGNLGIAFEARTDRPTVINMTNHAIFDMAGEGSSDGATGQMLTIPASRFT
PVNADLIPTGELRPVEGSVFDFRQSRRVADGLRDGTDRQIVFGRGYDHNFALDKGVTA
TPQLAARLEDPVSGRVLEVLTTEPGVQFYSGNFLDGTLVGKQGHLYRMGDGIALEPQK
FPDAPNHPDFVSARVDPGKPYRHVMIYRLSTSR"
misc_feature complement(118516..119562)
/locus_tag="PP1Y_Mpl1219"
/note="Galactose mutarotase and related enzymes
[Carbohydrate transport and metabolism]; Region: GalM;
COG2017"
/db_xref="CDD:32200"
misc_feature complement(118525..119520)
/locus_tag="PP1Y_Mpl1219"
/note="galactose mutarotase_like; Region:
galactose_mutarotase_like; cd09019"
/db_xref="CDD:185696"
misc_feature complement(order(118618..118620,118696..118698,
118816..118818,119032..119034,119038..119040,
119260..119262,119335..119337,119368..119370))
/locus_tag="PP1Y_Mpl1219"
/note="active site"
/db_xref="CDD:185696"
misc_feature complement(order(118618..118620,119038..119040))
/locus_tag="PP1Y_Mpl1219"
/note="catalytic residues [active]"
/db_xref="CDD:185696"
gene 119793..121112
/locus_tag="PP1Y_Mpl1228"
/db_xref="GeneID:10717973"
CDS 119793..121112
/locus_tag="PP1Y_Mpl1228"
/inference="protein motif:COG:COG0738"
/inference="similar to AA sequence:UniProt:B1M3M3"
/note="assigned by KAAS to KEGG Orthology:K02429 MFS
transporter, FHS family, L-fucose permease"
/codon_start=1
/transl_table=11
/product="MFS transporter FHS family L-fucose permease"
/protein_id="YP_004538068.1"
/db_xref="GI:334144859"
/db_xref="GeneID:10717973"
/translation="MPTVVSSSGTSAETAQETAIRYGPALTLLASLFFMWGFITVINN
TLLPHLRSVFELNYTQTTLIESVWFIAYFVASIPSAKLIERIGYKMSLVVGLLIMAAG
ALGMMLAAGIPSYGVTLTMLFVIASGITLLQVAANPYVAIVGKPETASSRLNLVQALN
SAGTMLAPLFGAYLILGRSKSGTSAVGTVLSEAERMADAQSVILPYGLVAVVLVVLAI
VIARFPLPAMGTANARVAKEERKHLSLWSHRNLVFGIPAIFIYLIAEIGVANLFVNFV
SQPDIANLTHEQAGRYLTFLWGGMMVGRFAGSAIMQRFDAAKVLAVFSVGAFVVMLVT
SFAHGPVAMWSLILVGLFHSIMFPTIFTLGIKGLGPLTEEGSGLLVMAIAGGALVIVQ
GWIADNYGLQTSFLLTAACELYVLFYALWGSKPTHALPDEVLEAQPV"
misc_feature 119865..121067
/locus_tag="PP1Y_Mpl1228"
/note="Fucose permease [Carbohydrate transport and
metabolism]; Region: FucP; COG0738"
/db_xref="CDD:31081"
misc_feature 119868..>120317
/locus_tag="PP1Y_Mpl1228"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(119910..119912,119919..119927,119931..119936,
119985..119987,119994..119999,120006..120008,
120018..120023,120027..120032,120177..120182,
120189..120194,120201..120206,120213..120215,
120249..120254,120261..120266,120282..120284)
/locus_tag="PP1Y_Mpl1228"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(121238..121993)
/locus_tag="PP1Y_Mpl1242"
/db_xref="GeneID:10717974"
CDS complement(121238..121993)
/locus_tag="PP1Y_Mpl1242"
/inference="protein motif:COG:COG2186"
/inference="similar to AA sequence:UniProt:B0SVS3"
/note="KEGG: cak:Caul_2414"
/codon_start=1
/transl_table=11
/product="GntR domain-containing protein"
/protein_id="YP_004538069.1"
/db_xref="GI:334144860"
/db_xref="GeneID:10717974"
/translation="MTDAELSKEKDAARPGEEPRGPGRRLHGAIAHKLGTDILSGKYA
PGDVLSGEVAFAEELQVSRSAYREAIQVLTAKGLVASRPKAGTRVLPRERWNLLDPEV
LGWAFAGEPDIEFVRSLFELRAIVEPAAARLAAKRRDKADLKAMKTALAEMRSHTLTT
EAGRAADRDFHAAILHATGNQALMVLSASIGAAVNWTTQFKLRARALPRSPIPDHTKV
YEAIAAGDGDAAAEAMNVLVELALDDTRSAMRP"
misc_feature complement(121244..121918)
/locus_tag="PP1Y_Mpl1242"
/note="Transcriptional regulators [Transcription]; Region:
FadR; COG2186"
/db_xref="CDD:32369"
misc_feature complement(121727..121918)
/locus_tag="PP1Y_Mpl1242"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature complement(order(121733..121744,121748..121753,
121781..121783,121790..121795,121799..121813,
121835..121840,121844..121846,121913..121915))
/locus_tag="PP1Y_Mpl1242"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(121337..121639)
/locus_tag="PP1Y_Mpl1242"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:203742"
gene 122106..123635
/locus_tag="PP1Y_Mpl1251"
/db_xref="GeneID:10717975"
CDS 122106..123635
/locus_tag="PP1Y_Mpl1251"
/inference="protein motif:COG:COG1012"
/inference="similar to AA sequence:UniProt:Q46MA2"
/note="KEGG: acr:Acry_0197"
/codon_start=1
/transl_table=11
/product="aldehyde dehydrogenase"
/protein_id="YP_004538070.1"
/db_xref="GI:334144861"
/db_xref="GeneID:10717975"
/translation="MTDFRSVAAETGQPHGEPFNVDGPAQVAQACDRADAAFDAYRAT
SREERAAFLERIAQEILAIGDSLIEAAMTESGLPRARLEGERGRTVGQLRMFADVVRK
GLWQQLRIDPAMPERQPLPRPDLRLRMIPVGPVAVFGASNFPLAFSTAGGDTASALAA
GCPVVVKGHPAHPITGGLVAQAITRAVAACGLPEGVFQHLVGPSNDLGAALVSDPRIM
AVGFTGSRSGGLALARIAQAREVPIPVYAEMSSINPVLLLPEALKARGEALGTAFVAS
LTMGAGQFCTNPGLILAIAGEGLDAFMAAATGSVSQAKPQTMLTAGIREAYAKGVETL
SGCPGVETLARGEDGDRTHGGAVLFQTTGEAFLADKAMGHEVFGASSIIVRCKDEAEL
AKVLAGLEGQLTATLHMDAADEDLAARLLPVLERKVGRILANGWPTGVEVCHAMVHGG
PFPATSDPRTTSVGSLAIDRFLRPVSYQNLSQDVLPAELRDSAMGDGAPRLIDGTLKL
D"
misc_feature 122235..123542
/locus_tag="PP1Y_Mpl1251"
/note="Alpha-Ketoglutaric Semialdehyde Dehydrogenase;
Region: ALDH_KGSADH; cd07129"
/db_xref="CDD:143447"
misc_feature 122235..123542
/locus_tag="PP1Y_Mpl1251"
/note="NAD-dependent aldehyde dehydrogenases [Energy
production and conversion]; Region: PutA; COG1012"
/db_xref="CDD:31216"
misc_feature order(122436..122438,122478..122480,122484..122486,
122793..122795,122802..122804,123294..123296,
123357..123359,123369..123371,123381..123383,
123387..123398,123402..123404,123426..123428,
123441..123446,123456..123461,123519..123524,
123528..123539)
/locus_tag="PP1Y_Mpl1251"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143447"
misc_feature order(122526..122528,122604..122606,122610..122615,
122730..122732,122769..122771,122778..122780,
122787..122789)
/locus_tag="PP1Y_Mpl1251"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:143447"
misc_feature order(122529..122531,122847..122849,122949..122951,
122958..122960)
/locus_tag="PP1Y_Mpl1251"
/note="catalytic residues [active]"
/db_xref="CDD:143447"
gene 123701..124696
/locus_tag="PP1Y_Mpl1267"
/db_xref="GeneID:10717976"
CDS 123701..124696
/locus_tag="PP1Y_Mpl1267"
/inference="protein motif:COG:COG3802"
/inference="similar to AA sequence:UniProt:Q48FW3"
/note="KEGG: mrd:Mrad2831_1329"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538071.1"
/db_xref="GI:334144862"
/db_xref="GeneID:10717976"
/translation="MTFLRLLQHRAVDGSRSVILAEGNTAHFLEGVTSVRELALRAIA
AGDTLADTAKACGQGPAVDIRAEFDASRLIAPIDHEDPAHLILSGTGLTHLGSAEGRD
KMHREAMASQAQTDSMRMFLEGLEGGKPAPGEVGQQPEWFYKGDGSQLVGPNDPLLMP
AFAKDGSEEPEVAGIYIVGEDGAPYRIGFALANEYSDHVTERHNYLWLAHSKLRQAAL
GAELLLGTPPTGIEGTSRILRNGKTLWEKPFLSGEANMSHTIANLEHHHFKYDLFCRP
GDVHVHFFGTATLSFSDGVTTQEGDVFEISASPFTLPVSNPLVRARERAVTVRTL"
misc_feature 123710..124654
/locus_tag="PP1Y_Mpl1267"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: GguC; COG3802"
/db_xref="CDD:33596"
misc_feature 124112..124630
/locus_tag="PP1Y_Mpl1267"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; pfam01557"
/db_xref="CDD:201859"
gene 124700..125626
/locus_tag="PP1Y_Mpl1273"
/db_xref="GeneID:10717977"
CDS 124700..125626
/locus_tag="PP1Y_Mpl1273"
/EC_number="1.1.1.48"
/inference="protein motif:COG:COG0673"
/inference="similar to AA sequence:UniProt:B2IBL2"
/note="assigned by KAAS to KEGG Orthology:K00035
D-galactose 1-dehydrogenase"
/codon_start=1
/transl_table=11
/product="D-galactose 1-dehydrogenase"
/protein_id="YP_004538072.1"
/db_xref="GI:334144863"
/db_xref="GeneID:10717977"
/translation="MDPIRIAVVGLGKIARDQHLPAIAGNAAFSLAATVSPDDPGLDG
IAHFAGLEELLEHGPAIDAVSLCTPPQVRYDLAALALKRGAHVFLEKPPGATLSEVVA
LRERADKVGVSLFAAWHSRFAAGVAPARAWLAERRIDTVSIVWREDVRVWHPGQAWIW
EPGGLGVFDPGINALSILTHILPRPVFLKTATLSIPENRAAPIAADLNLRDTAGAHIH
MDLDWRQTGPQSWDIVVETDAGTLKLSSGGAVLALPNGTEHNEDLEYPGLYARFANLI
RGGRSDVDLDPLRLVADAFLRGKRESVEPFHD"
misc_feature 124700..125614
/locus_tag="PP1Y_Mpl1273"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature 124709..125044
/locus_tag="PP1Y_Mpl1273"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature 125651..127216
/note="potential frameshift: common BLAST hit:
gi|294146654|ref|YP_003559320.1| alpha-L-arabinosidase"
gene 125651..125965
/locus_tag="PP1Y_Mpl1283"
/db_xref="GeneID:10717978"
CDS 125651..125965
/locus_tag="PP1Y_Mpl1283"
/EC_number="3.2.1.55"
/inference="protein motif:COG:COG3534"
/inference="similar to AA sequence:UniProt:B0T7X6"
/note="KEGG: cak:Caul_3612"
/codon_start=1
/transl_table=11
/product="alpha-N-arabinofuranosidase"
/protein_id="YP_004538073.1"
/db_xref="GI:334144864"
/db_xref="GeneID:10717978"
/translation="MLKALRHATKLLLLGATALAGVAQADTGGKSTTATIHADTPGPV
YNKDIFTQFAEHLGNGIYGGLWVGKDSKIPNTNGFRNDVVSALRDLSVPVIRWPGGCF
AD"
misc_feature 125738..>125962
/locus_tag="PP1Y_Mpl1283"
/note="Alpha-L-arabinofuranosidase [Carbohydrate transport
and metabolism]; Region: AbfA; COG3534"
/db_xref="CDD:33336"
gene 126089..127216
/locus_tag="PP1Y_Mpl1285"
/db_xref="GeneID:10717979"
CDS 126089..127216
/locus_tag="PP1Y_Mpl1285"
/inference="protein motif:COG:COG3534"
/inference="similar to AA sequence:UniProt:B0T7X6"
/note="KEGG: xcc:XCC1191"
/codon_start=1
/transl_table=11
/product="alpha-L-arabinosidase"
/protein_id="YP_004538074.1"
/db_xref="GI:334144865"
/db_xref="GeneID:10717979"
/translation="MGAQAYVAGNVGNGSPREMAEWVEYMTAPAGSLADERARNGHKE
PWAVPYFGVGNELWGCGGNMRAEYAADVTRRYATFIKAPAGTSILKVAAGANGDDYDW
TETLMRDAAQTLDGLSLHYYVLPDGGWPPRAPAVGFDESAWADTLHEAWRMDELITKH
SAIMDKYDPEKRMFLAVDEWGAWYAQDPGTHPGFLRQQNTLRDALIAAINLDIFAKHA
DRVRMTAIAQMVNVLQAMILTDGDKMVLTPTYHVFEMYKPWQDATVLPIDIDTPTYAK
GKYTLPAVSGSAVKAKDGKIHIGLSNADPNQSNTVTIALEGVNAKRVSGRVLTAAKID
AHNTFDAPQAVRPASFHGASIKGGKLIVTLPAKSVVVLDLQ"
misc_feature 126620..127192
/locus_tag="PP1Y_Mpl1285"
/note="Alpha-L-arabinofuranosidase C-terminus; Region:
Alpha-L-AF_C; pfam06964"
/db_xref="CDD:203553"
gene 127213..128103
/locus_tag="PP1Y_Mpl1291"
/db_xref="GeneID:10717980"
CDS 127213..128103
/locus_tag="PP1Y_Mpl1291"
/EC_number="2.7.1.58"
/inference="protein motif:COG:COG3734"
/inference="similar to AA sequence:UniProt:B0SYT6"
/note="assigned by KAAS to KEGG Orthology:K00883
2-dehydro-3-deoxygalactonokinase"
/codon_start=1
/transl_table=11
/product="2-dehydro-3-deoxygalactonokinase"
/protein_id="YP_004538075.1"
/db_xref="GI:334144866"
/db_xref="GeneID:10717980"
/translation="MSEAYVLGDWGTSRLRLYRMSGADPTARLNGPGTGALEISAESV
LAERLEVWLGEGRLADVTLCGMAGAPGALLPAGYAPCPADANSWLASRATTQVAGVNV
AVLPGLSCRTEAGVPEVMRGEETQVFGALVLEPSLAQGENIVVLPGTHSKWVRLRNGS
ITGFRTHPTGELFALLAGQSTLTGPDMPGDGTFQDGFARGLVRSHEPFTSALFEARAA
RMLDGKSKDWSRGYLSGLLIGGEVRAEAGAGSDIVLIGDPSLCKLYENGLLRLGCKAT
RIDGDAAVVAGLRLARGPKS"
misc_feature 127213..128091
/locus_tag="PP1Y_Mpl1291"
/note="2-keto-3-deoxy-galactonokinase [Carbohydrate
transport and metabolism]; Region: DgoK; COG3734"
/db_xref="CDD:33529"
misc_feature 127237..128085
/locus_tag="PP1Y_Mpl1291"
/note="2-keto-3-deoxy-galactonokinase; Region: DGOK;
pfam05035"
/db_xref="CDD:203157"
gene 128100..128732
/locus_tag="PP1Y_Mpl1302"
/db_xref="GeneID:10717981"
CDS 128100..128732
/locus_tag="PP1Y_Mpl1302"
/EC_number="4.1.2.21"
/inference="protein motif:COG:COG0800"
/inference="similar to AA sequence:UniProt:B0SYT5"
/note="assigned by KAAS to KEGG Orthology:K01631
2-dehydro-3-deoxyphosphogalactonate aldolase"
/codon_start=1
/transl_table=11
/product="2-dehydro-3-deoxyphosphogalactonate aldolase"
/protein_id="YP_004538076.1"
/db_xref="GI:334144867"
/db_xref="GeneID:10717981"
/translation="MKIEDALATGAPPIAAILRGIRPPEAVAVGNALIEAGIRIIEVP
FNSPDPAASIAAMADALGDRAAIGGGTVISAALAETLGGAGGAFMVSPNVDPAVIARS
IALGMDVLPGFLTPTEAFAAIDAGARDLKLFPGSSLGSGYIKAIGEVLPKHVRIWAVG
GVGPANLAEYRAAGCFGIGVGSSLYKPGFDADTVGAKAREIVAAWHAASA"
misc_feature 128121..128723
/locus_tag="PP1Y_Mpl1302"
/note="2-dehydro-3-deoxy-6-phosphogalactonate aldolase;
Reviewed; Region: PRK09140"
/db_xref="CDD:181670"
misc_feature 128136..128660
/locus_tag="PP1Y_Mpl1302"
/note="KDPG and KHG aldolase; Region: KDPG_aldolase;
cd00452"
/db_xref="CDD:188632"
misc_feature order(128148..128150,128223..128225,128235..128237,
128310..128312,128490..128492,128496..128498,
128574..128576)
/locus_tag="PP1Y_Mpl1302"
/note="active site"
/db_xref="CDD:188632"
misc_feature order(128235..128237,128310..128312,128316..128318,
128373..128384,128442..128453,128457..128459,
128469..128471,128496..128501,128532..128534,
128544..128549)
/locus_tag="PP1Y_Mpl1302"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:188632"
misc_feature 128490..128492
/locus_tag="PP1Y_Mpl1302"
/note="catalytic residue [active]"
/db_xref="CDD:188632"
gene 129165..131537
/locus_tag="PP1Y_Mpl1312"
/db_xref="GeneID:10717982"
CDS 129165..131537
/locus_tag="PP1Y_Mpl1312"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B4SM55"
/note="KEGG: smt:Smal_3801"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538077.1"
/db_xref="GI:334144868"
/db_xref="GeneID:10717982"
/translation="MKNLITVSWIALAFMGVPAMAQTATAEAVTSSQSDAIVVTGTRE
RSRTIFETLAPIDSLSQDAVRSSVSGDLNDTLAQLLPSYNIQRLPAADGQAFVRPATL
RGLSADQTLVLLNGKRYHRSALLGTRGAQAADLASIPSLAIKRIEVLRDGAAAQYGSD
AIAGVINIILEDEPGMSAYSQFSQYYEGDGNEYQVGARGGIALGDRGSIVLTGQYDHA
EATSRTRQRADAEALQEANPDLDVPNPVQRWGQPDEERIHGSLDARYEFSEAIEVYGF
VTAQDGDGVTDFNWRNPTATASVFKDTAAFPGFNFAQWYPAGFTPRFSTRYSDIQTSA
GLRGEIAPAFTYDLSGSYGRSTIEYGMTESLNASMGPDSPTSFYIGKLEQREFNLNAD
FVYRLDVGSTEPINVAFGAERRRETYEVGQGDDASWTIGQGAAEGLASSSNGYPGFGP
DRVGTWHQTSYAGYLDLEWRPVDMLTLGAAGRYEDFSSFGDTFNYKLSARVDPIEGLG
IRATWSTGFRAPTPAQLNTRATTQGLDTTTMTIYTQGRLSPSDPLAIALGARPLTPEK
SRSLTGGVTFQTGFGLSGSVDLYQIKLMDRFSQSATFAVPADYNNVEGYSAISYFTND
FDTRTRGIDAVLSYVTQLGAGRLKANLAYNYNETKVTSGTSAAISNETQRVRFENALP
HHNGTASLGYDVAGFEVLARARYYGPWTDVSGNATGEIFQKFGSMVLFDLSAAYTFNE
HFSLRVGAENIFDSYPDEATFQAVRGLIYSRNAPYDTDGGQYYVRLGVNF"
misc_feature 129192..131534
/locus_tag="PP1Y_Mpl1312"
/note="Outer membrane receptor for ferrienterochelin and
colicins [Inorganic ion transport and metabolism]; Region:
FepA; COG4771"
/db_xref="CDD:34384"
misc_feature 129327..131534
/locus_tag="PP1Y_Mpl1312"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(129327..129356,129384..129386,129390..129416,
129450..129452,129465..129479,129498..129518,
129534..129536,129582..129614,129648..129674)
/locus_tag="PP1Y_Mpl1312"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(130227..130229,130308..130310)
/locus_tag="PP1Y_Mpl1312"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 131537..132820
/locus_tag="PP1Y_Mpl1334"
/db_xref="GeneID:10717983"
CDS 131537..132820
/locus_tag="PP1Y_Mpl1334"
/EC_number="5.1.1.17"
/inference="protein motif:COG:COG0520"
/inference="similar to AA sequence:UniProt:B6IQN7"
/note="KEGG: rce:RC1_0325"
/codon_start=1
/transl_table=11
/product="isopenicillin N epimerase"
/protein_id="YP_004538078.1"
/db_xref="GI:334144869"
/db_xref="GeneID:10717983"
/translation="MIDTRTPRRTVLKGALGFASLTVGTKGVAGAVQPHLPVETGDEE
AFWQAIAGQYDVTREVVQVENGNWGMMPRPVFTAYQEHLARVNRDTSYYSRRGFGRDA
MAVREEIADALGVQPDEIAFTRNATEALKALILGYNQLKPGEAVLYSDLDYDSMQASM
DSLAARCKARVVRIALPEPASHQGLLAAYTQALDENPQVRLLLLTRIGHRTGLAVPVR
EIAAMARARGVDTIVDAAHSWYQIDGDIAAMDCDFVGVNGHKWLGAPLGLGVIHIRRG
ALHKIDPDPAEKGDAGVFSRVHTGTMDISALLTAPDALAFHARIGSERRTRRLRALRS
RWVDQARTIANVQILTPEDPELSASITSFRLKGRTSVQANKALAKQLLDRHGIFTVHR
DGVASGACVRITPALFNSMAEMDKVAAAIAAIASN"
misc_feature 131729..132784
/locus_tag="PP1Y_Mpl1334"
/note="Selenocysteine lyase/Cysteine desulfurase
[Posttranslational modification, protein turnover,
chaperones]; Region: csdA; COG0520"
/db_xref="CDD:30866"
misc_feature 131744..132787
/locus_tag="PP1Y_Mpl1334"
/note="Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the...; Region: AAT_I;
cl00321"
/db_xref="CDD:213094"
misc_feature order(131912..131917,131924..131926,132152..132154,
132236..132238,132245..132247,132305..132307,
132314..132316)
/locus_tag="PP1Y_Mpl1334"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99742"
misc_feature 132314..132316
/locus_tag="PP1Y_Mpl1334"
/note="catalytic residue [active]"
/db_xref="CDD:99742"
gene complement(132939..133427)
/locus_tag="PP1Y_Mpl1348"
/db_xref="GeneID:10717985"
CDS complement(132939..133427)
/locus_tag="PP1Y_Mpl1348"
/inference="similar to AA sequence:UniProt:A5VGB3"
/note="KEGG: nar:Saro_3911"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538079.1"
/db_xref="GI:334144870"
/db_xref="GeneID:10717985"
/translation="MRLRCALVVSLALLASPVLAQANLTAKDRAAAFRAAGFTLQGGQ
WSACGDPGTPSYSPGQIDTVRDLNGDGRPEAVITEGGTYCFGMTGTGYTIVSKQADGS
WKNITGGTGIPTFLATRGVGGWPDIEIGGPGFCFPVERWNGKAYVLNRHQYDGKPCRP
QM"
gene complement(133563..134282)
/locus_tag="PP1Y_Mpl1357"
/db_xref="GeneID:10717986"
CDS complement(133563..134282)
/locus_tag="PP1Y_Mpl1357"
/note="KEGG: sal:Sala_0435"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538080.1"
/db_xref="GI:334144871"
/db_xref="GeneID:10717986"
/translation="MTGPEALQVSRVEWKDAVRIIRSTYPPIDLFEDIADPADWPLLI
SAEQKTNPRIMTTIGNLDLVPVERRVGGNGASYLMAPFTHVSTDRPSRFTDGSYGVLY
VGNGFETALFETIHHHARFMARTAEAPGWTSQFREIVLSVGADLHDMRDSAADKRALD
PDSYAASQALAATLRAAGSDGIVYPSIRHRGGQCAALFYPDGAFEPVQGRHLDYHWDG
TGVDLVRDAGSGAVFRVVHSD"
misc_feature complement(133689..134018)
/locus_tag="PP1Y_Mpl1357"
/note="RES domain; Region: RES; smart00953"
/db_xref="CDD:198021"
gene complement(134279..134692)
/locus_tag="PP1Y_Mpl1364"
/db_xref="GeneID:10717987"
CDS complement(134279..134692)
/locus_tag="PP1Y_Mpl1364"
/inference="similar to AA sequence:UniProt:Q1NCJ9"
/note="KEGG: sal:Sala_0436"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538081.1"
/db_xref="GI:334144872"
/db_xref="GeneID:10717987"
/translation="MLALEPIDTAPGVFRPDPVTQNEAAAMFRAVLNLFARWDLTDEQ
AATLLDMPVRTYRRWKAEGPGRISRDGAARLSNLMGIHKALRIIFSEARRGYAWIKAD
NAAFAGASALDIMLGGELTDLMRVRRYLDAERGAW"
misc_feature complement(134282..134449)
/locus_tag="PP1Y_Mpl1364"
/note="Protein of unknown function (DUF2384); Region:
DUF2384; pfam09722"
/db_xref="CDD:204292"
gene complement(134860..135480)
/locus_tag="PP1Y_Mpl1369"
/db_xref="GeneID:10717988"
CDS complement(134860..135480)
/locus_tag="PP1Y_Mpl1369"
/inference="protein motif:COG:COG1309"
/inference="similar to AA sequence:UniProt:Q2GA94"
/note="KEGG: nar:Saro_0784"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_004538082.1"
/db_xref="GI:334144873"
/db_xref="GeneID:10717988"
/translation="MATKRTPGKRRGKPYHREDLRQELLDAAKAFIVREGYENLSMRR
LAEEIGVSSAAPYHHFPDRRALLLAVAVDGYHSMFADAHIGVDNTDPRENLRGQLLNF
LRFASGNRRIFALMYESELVREGLAPEIQEVQDLGFRRLHELMMAVAPDLSDRERSIR
CATLWCAVFGFALQTNRSMIRTPEPEPDREELAEALVGQALRLLDS"
misc_feature complement(134869..135456)
/locus_tag="PP1Y_Mpl1369"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature complement(135271..135411)
/locus_tag="PP1Y_Mpl1369"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
misc_feature complement(134941..135183)
/locus_tag="PP1Y_Mpl1369"
/note="WHG domain; Region: WHG; pfam13305"
/db_xref="CDD:205485"
gene 135637..136569
/locus_tag="PP1Y_Mpl1374"
/db_xref="GeneID:10717989"
CDS 135637..136569
/locus_tag="PP1Y_Mpl1374"
/inference="similar to AA sequence:UniProt:Q2GA93"
/note="KEGG: nar:Saro_0785"
/codon_start=1
/transl_table=11
/product="xylose isomerase-like TIM barrel
domain-containing protein"
/protein_id="YP_004538083.1"
/db_xref="GI:334144874"
/db_xref="GeneID:10717989"
/translation="MTGFRYGVSLYSYTDDFGTVMTLDDAFDHVADTGATGIEILGET
SVPLYPEPPAAWLDHWFAQLDRYKLEPTNFACWVDTRIQIDRNMNVEEGAAQIAQDLR
LAHRLGFKFIRPKFGVIDHELTPDPIWEGAVERNLDLAQQLDLVILPEIHSPTPIRHP
VTDAYVNFIERTGTQHFGLMIDTGIFQDRPIDKWGGGETDEIKKGALSFLNGIKVPVE
HLEDVIQYVPFIQAKFHHIDETLHDHQIPWERIVPMLKKLGYSGYLSSEYEGERAPWV
AIEQVRRQHALIRQLEEEYDASHPGMAQGGTANA"
misc_feature 135652..136506
/locus_tag="PP1Y_Mpl1374"
/note="Sugar phosphate isomerases/epimerases [Carbohydrate
transport and metabolism]; Region: IolE; COG1082"
/db_xref="CDD:31279"
gene 136562..136966
/locus_tag="PP1Y_Mpl1383"
/db_xref="GeneID:10717990"
CDS 136562..136966
/locus_tag="PP1Y_Mpl1383"
/inference="similar to AA sequence:UniProt:Q2GA92"
/note="KEGG: nar:Saro_0786"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538084.1"
/db_xref="GI:334144875"
/db_xref="GeneID:10717990"
/translation="MLERTHIQSTGFRNIGPEGARTGFELRIRQANYRSSRLSLIEGV
DITVDGVLYPAAHNRFRLGDREYTRSELNEATETRLYVGDYFTVVVPKAGGLTRGVHL
VGSAISYRHPYFPPEFQPAIARNERHATIILS"
gene 137106..139433
/locus_tag="PP1Y_Mpl1386"
/db_xref="GeneID:10717991"
CDS 137106..139433
/locus_tag="PP1Y_Mpl1386"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:Q2GA91"
/note="KEGG: nar:Saro_0787"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538085.1"
/db_xref="GI:334144876"
/db_xref="GeneID:10717991"
/translation="MALFASAPALAQTADEQASGEASTPGEIIVTAQRRSENVLKVPV
SVTVVGAEQLTQRGANDLTAVTKLAPSLQVQQDNTFSVRGVGTATFSNTVEASVSQVI
DEVVLGNREFAANAFYDIARVEVLNGPQGLLFGKNASAGLVNITTNKPKLGEMTFSAD
GELVQRARPGNDGTGFQIRSTANVPVGENAALRLNFIYSDQDPITVSQVNPAVRNDLS
LENLGVRAKFLYEPSDTLSVYVIGDYNRQRGITGRYDITFREFGPGSQYPDRGLVAGP
ENFTFAAEAPNYRDSDTGGLQANINLALGNGMDLTSITAWKQAKTDFQFDSDQTPFNF
FSYNSSNQKYDQFSQELRLALPSESVLSGQFGLYYYRSVGNTAGFRGGNNGLPDFVAV
GFPFCVGATVTAGPPPACNVSNASFLGQDYQYRLVNNSYAGFGQLSYQLTDAFKLTAG
ARLTYEKAQIDLSENFGQYFVTLGVPSNVTKQSTDATDLSYRVGFDWQATPDLMVYGF
YGEGFKGPGFSNTAPAPNADLAVRPEISRGGELGIKGKALDGALTFSLSAFYTKFYDL
QVQAFVQSLRTFVLGNAATATTKGLDFSFQARPFEGLTLSGSAAYADATFDDYPGAQC
YPTQTTDGCKADVNSSLPDFVGTFNAKGYQLPLSSKFTATLGAEYAAPISDALEAQFG
LGYYHRSPQSAGIGAPFTIPTWDTIDLRAGIKAENWNISLFCKNCTNEIRPISIGSDG
GDANPIGTAPPVLTLNQRFSFDSVRTIGVRAGINF"
misc_feature 137109..139388
/locus_tag="PP1Y_Mpl1386"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature 137238..139388
/locus_tag="PP1Y_Mpl1386"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(137238..137267,137295..137324,137343..137360,
137370..137393,137439..137447,137463..137486,
137520..137546)
/locus_tag="PP1Y_Mpl1386"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(138093..138095,138219..138221)
/locus_tag="PP1Y_Mpl1386"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 139529..140446
/locus_tag="PP1Y_Mpl1409"
/db_xref="GeneID:10717992"
CDS 139529..140446
/locus_tag="PP1Y_Mpl1409"
/inference="protein motif:COG:COG0657"
/inference="similar to AA sequence:UniProt:Q2GA90"
/note="KEGG: nar:Saro_0788"
/codon_start=1
/transl_table=11
/product="esterase/lipase-like protein"
/protein_id="YP_004538086.1"
/db_xref="GI:334144877"
/db_xref="GeneID:10717992"
/translation="MALPALRSPFLTLGLLLIAAGSPAAAQTGISTETVAAPAQPNTI
VLQTAEKVDREIWHMSESGRYAVRNVTRPTLTAFRPVGQPSPASVIIAPGGAFLGLEM
DKEGWEVARWFANRGVTAFVLKYRTLPTPPDQKVFVAELDKLIAGEKSTLAPPSDTPA
KALADGLAALRYVRTNAAEYGIDPQRVGFMGFSAGGFLSRSVVEKGGEDRPDFVAPIY
PNMAAMNVPADAPPMFVAIAADDFLLARQDGLPLLESYRAAGKSIELHLYSKGGHGFG
AGPVGSPEEGWLDLMYRWMRTQGMLSKDK"
misc_feature 139538..140398
/locus_tag="PP1Y_Mpl1409"
/note="Esterase/lipase [Lipid metabolism]; Region: Aes;
COG0657"
/db_xref="CDD:31002"
misc_feature <140015..140413
/locus_tag="PP1Y_Mpl1409"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene 140449..141783
/locus_tag="PP1Y_Mpl1421"
/db_xref="GeneID:10717995"
CDS 140449..141783
/locus_tag="PP1Y_Mpl1421"
/inference="protein motif:COG:COG2723"
/inference="similar to AA sequence:UniProt:Q2GA89"
/note="KEGG: nar:Saro_0789"
/codon_start=1
/transl_table=11
/product="glycoside hydrolase family protein"
/protein_id="YP_004538087.1"
/db_xref="GI:334144878"
/db_xref="GeneID:10717995"
/translation="MIDRRNLIASAAAFGASAAMTGSSALARTAKPKPIDPKFPQGFL
WGAATAAHQVEGNNINADLWPIENAPGTTFADRSGDAANSFELWRADLDLVKGMGLNS
YRFSLEWARIEPDEGYFSNAMLDHYKAMIDGCRERGLNPVVTFNHFTTPRWFAAKGGW
HHPDSPALFARFCDRAARHLSQGMALATTLNEPNLVGVIGEILPPQLVAGDKATQETV
AKQLGVPLYSPGVALYVKDPKTYRANMMEAHRLGVAAIKAMRSDLDVGVSLAIIDDQA
AGKHSMRDAIRERYYGEWLRLAAHTCDFIGVQNYERKVWNDKGALPPPADAPRNAAGA
EVWPGSLAGAVRYAWEATKLPVYVTEHGVNTDDDALRQWLIPAALTELKRAMDEGVPV
RGYFHWSLIDNFEWGFGYHHHFGLHSFDHETFKRTAKPSAAVLGMIARANSL"
misc_feature 140560..141774
/locus_tag="PP1Y_Mpl1421"
/note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
galactosidase [Carbohydrate transport and metabolism];
Region: BglB; COG2723"
/db_xref="CDD:32615"
gene complement(142014..143795)
/locus_tag="PP1Y_Mpl1439"
/db_xref="GeneID:10717996"
CDS complement(142014..143795)
/locus_tag="PP1Y_Mpl1439"
/inference="protein motif:COG:COG3653"
/inference="similar to AA sequence:UniProt:A0QNA1"
/note="KEGG: mmi:MMAR_0213"
/codon_start=1
/transl_table=11
/product="D-amino acid aminohydrolase"
/protein_id="YP_004538088.1"
/db_xref="GI:334144879"
/db_xref="GeneID:10717996"
/translation="MLDVLIKGGEVVDGTGRPRFEADIGIVDGRIVAVGEVSDPARRT
IDATGLLVTPGWVDIHTHYDGQATWDMLLDPSFSSGVTTAILGNCGVGFAPVARGDEG
RLIDLMDGVEEIPGGALHAGLAWNWSSFPEYLDVLDSRPRSFDIGCYLPHGPLRLYVL
GDKVGCGRKADADEIARMAGLVDQAMEAGAFGVSSSRTSVHRTIHGDMTPDFEADREE
LTAIARVVAQHRGVMEFAPSGVVGEDPQGLRAEMAMFDRIVAETGVDLHMLLLQPNLD
PDYWQEQLDWAARINAGGHSRVFGQVSGRSIGALLSFFGTHPFMERPGFREVKDTLSR
DKWLGALADPQVKARILRETDPEGTFGAFLNQHWNNCFDLGETANYEPDASVNVTVLA
AAAGTTAQSYVYDMMLKTSRHPRLLLAINNYVGGGLDKLKPMIEHPATVLGASDAGAH
VMTICDGSMNSFMLTHWARDRSRGPIIPLEQVVRMMSHDTARSMGIADRGTLEPGMRA
DINVIDFDKLELGKPTIVDDLPQGASRLLQPVSGYRMTMVNGAITREYDEPTGAMPGR
LLRHKAGNGALSQRDRARASVPATHEA"
misc_feature complement(142089..143789)
/locus_tag="PP1Y_Mpl1439"
/note="N-acyl-D-aspartate/D-glutamate deacylase [Secondary
metabolites biosynthesis, transport, and catabolism];
Region: COG3653"
/db_xref="CDD:33451"
misc_feature complement(<142866..143789)
/locus_tag="PP1Y_Mpl1439"
/note="D-aminoacylases (N-acyl-D-Amino acid
amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino
acids to produce the corresponding D-amino acids, which
are used as intermediates in the synthesis of pesticides,
bioactive peptides, and antibiotics; Region:
D-aminoacylase; cd01297"
/db_xref="CDD:73255"
misc_feature complement(order(142986..142988,143088..143090,
143529..143531,143610..143612,143616..143618))
/locus_tag="PP1Y_Mpl1439"
/note="active site"
/db_xref="CDD:73255"
misc_feature complement(order(142869..142871,142887..142889,
142980..142982))
/locus_tag="PP1Y_Mpl1439"
/note="putative substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:73255"
misc_feature complement(142098..>142532)
/locus_tag="PP1Y_Mpl1439"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have a...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:206955"
gene 144093..146048
/locus_tag="PP1Y_Mpl1464"
/db_xref="GeneID:10717997"
CDS 144093..146048
/locus_tag="PP1Y_Mpl1464"
/inference="protein motif:COG:COG3533"
/inference="similar to AA sequence:UniProt:Q1NHZ1"
/note="KEGG: sde:Sde_0778"
/codon_start=1
/transl_table=11
/product="acetyl-CoA carboxylase, biotin carboxylase"
/protein_id="YP_004538089.1"
/db_xref="GI:334144880"
/db_xref="GeneID:10717997"
/translation="MPATDFSGHSRRDLLVSTGLAGATAGLATILPATALAAQKAGTQ
VKPARLEPFDLSDVTLEEGPFLHAQRLTEAYLLRLQPDRLLHNFRVNAGLAPRAAVYG
GWESDEIWADINCHGHTLGHYLSACALAFRSTNDRRFKQRVDYIANELAACQKATGSG
LVCAFPDGPALLTAHLRGDKITGVPWYTLHKVYAGLRDGALLADSTVSREVLIRLADW
GVVATRPLTDGQFETMLATEHGGMNEVYADLYAMTGNEDYRELSQRFSHKAVMDPLVQ
GRDLLDGMHANTQVPKIVGFQRVYEITGDDRYAQAANFFFRTVAHTRSFATGGHGDNE
HFFAMADFDRHVFSAKGSETCCQHNMLKLARLLFMQDPNADYADYYERTLYNGILASQ
DPDSGMVTYFQGARPGYMKLYHTPEHSFWCCTGTGMENHVKYRDSIYFHDERSLYVNL
FVPSSVAWKEKGAELIQRTAFPEKPTTGLQWKLRAPAKIALQLRHPRWSRTAVVRVNG
QEVARSATAGSYVEVARTWKDGDRVELQLEMEPTVESAPAAPDIVAFTYGPIVLAGAL
GREGLAPDADIIVNERKIGEYNKSDVAVPTIAGDPRLVAQRLRPGAAPLEFAIAAEDG
SPIRLIPYHRIAHERYATYWRVKPAEA"
misc_feature 144261..145781
/locus_tag="PP1Y_Mpl1464"
/note="Putative glycosyl hydrolase of unknown function
(DUF1680); Region: DUF1680; pfam07944"
/db_xref="CDD:116554"
misc_feature 144264..145991
/locus_tag="PP1Y_Mpl1464"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3533"
/db_xref="CDD:33335"
gene complement(146211..148214)
/locus_tag="PP1Y_Mpl1487"
/db_xref="GeneID:10717999"
CDS complement(146211..148214)
/locus_tag="PP1Y_Mpl1487"
/inference="protein motif:COG:COG1472"
/inference="similar to AA sequence:UniProt:Q9RH02"
/note="KEGG: avi:Avi_0107"
/codon_start=1
/transl_table=11
/product="beta-glucosidase"
/protein_id="YP_004538090.1"
/db_xref="GI:334144881"
/db_xref="GeneID:10717999"
/translation="MKVLRRFVTSLAISCSVALSLAACAAVAEHPVVGAQRIAQPRID
SRSIPVIEVDGLQFRDLDRNGVLTAYEDWRLSPDERAADLLSRMTVEEKAGQMVVANA
FSNAPFGQPASGYDMGMVTNMVRAQGITHLNSMLVLPLAQFAQANNAIQEEAEQGRLG
VPAVIATDPRHHIASTIGAGVQSGGFSEWPDTTGFAGLGDMTLASQFASTVRRDLRAT
GISMLLGPQLDLATEPRWARISGSLGESPASAAPLAAVLVEGLQGSADGLTRDGVATV
AKHFVGYAAARDGWDAHNRYGRFASVDEAELKEHLKPFEAAFAVHPSAVMPAYTIAQG
LTVDGQAVEPVGAAYSKVLVHDLLRTRYGFDGVVLTDWGVTADCGEICRNGFPKGERP
TFEGISMAWGVEDLSRPERFARAISVGVDQFGGVMDTGPLLEAIRSGLVTPSQVDAAV
GRILRQSFRLGLFEAPFVDPAEAERIAGTPHDKQLARIAQGRAMVRLEDDGRIAGRTS
GRVWLRNVDPAAAKAAGYEVVSDPAKADFAVVRTAAPHEMLHPGYFFGSMQHEGSLAF
APGDPDIAAIEALPPGLPLAVSIYLDRPAIVTPLKRRANLLLADFGARDDALFDVLAG
RTKAQGTLPFELPSSMDAVMAQRPGTPADSEGPLYPLHYRKTN"
misc_feature complement(146703..147953)
/locus_tag="PP1Y_Mpl1487"
/note="Beta-glucosidase-related glycosidases [Carbohydrate
transport and metabolism]; Region: BglX; COG1472"
/db_xref="CDD:31661"
misc_feature complement(146850..147950)
/locus_tag="PP1Y_Mpl1487"
/note="Glycosyl hydrolase family 3 N terminal domain;
Region: Glyco_hydro_3; cl07971"
/db_xref="CDD:208801"
misc_feature complement(146226..>146636)
/locus_tag="PP1Y_Mpl1487"
/note="Glycosyl hydrolase family 3 C-terminal domain;
Region: Glyco_hydro_3_C; pfam01915"
/db_xref="CDD:190157"
gene complement(148559..149545)
/locus_tag="PP1Y_Mpl1514"
/db_xref="GeneID:10718000"
CDS complement(148559..149545)
/locus_tag="PP1Y_Mpl1514"
/inference="protein motif:COG:COG4977"
/inference="similar to AA sequence:UniProt:A6UGW0"
/note="KEGG: atu:Atu3462"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_004538091.1"
/db_xref="GI:334144882"
/db_xref="GeneID:10718000"
/translation="MVAHAVAAEIGLVLYEHCQAAMVHGMTDLLGVASTFSADRGGPI
IRISHWSKARDGTFSRTFDTHEALPGKPAILVVPGRLTGPPDADESAPYARWLLDRHA
QGTTLASNCGGAFLLAATGLLSGRRATTHWLFADQLRDRFPEILVDADKIVIEDGDII
TAAGLMAWTDLGLRLIDRVLGPTIMVETGKFWLIDPAGREQRHFSSFSPRLTHGDETI
LKVQHWLQARAVRHLTLADMAAQAQLEERTFQRRFKSATGLKPIEYVQHLRVGKAREL
LEFTRRTVDQIAWSVGYEDPAAFRRIFSRIQGLTPGEYRTRFSSGAELRIMA"
misc_feature complement(148580..149545)
/locus_tag="PP1Y_Mpl1514"
/note="Transcriptional regulator containing an amidase
domain and an AraC-type DNA-binding HTH domain
[Transcription]; Region: COG4977"
/db_xref="CDD:34583"
misc_feature complement(148961..149518)
/locus_tag="PP1Y_Mpl1514"
/note="AraC transcriptional regulators having a Type 1
glutamine amidotransferase (GATase1)-like domain; Region:
GATase1_AraC_2; cd03138"
/db_xref="CDD:153232"
misc_feature complement(149213..149215)
/locus_tag="PP1Y_Mpl1514"
/note="conserved cys residue [active]"
/db_xref="CDD:153232"
misc_feature complement(148748..148873)
/locus_tag="PP1Y_Mpl1514"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature complement(148598..148708)
/locus_tag="PP1Y_Mpl1514"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 149698..150525
/locus_tag="PP1Y_Mpl1525"
/db_xref="GeneID:10718001"
CDS 149698..150525
/locus_tag="PP1Y_Mpl1525"
/inference="protein motif:COG:COG0596"
/inference="similar to AA sequence:UniProt:P25026"
/note="KEGG: sme:SM_b20054"
/codon_start=1
/transl_table=11
/product="putative non-heme chloroperoxidase protein"
/protein_id="YP_004538092.1"
/db_xref="GI:334144883"
/db_xref="GeneID:10718001"
/translation="MTTITTGDGTRIFFKDWGDKNAQPIVFSHGWPLSADAWDAQMVF
FAREGFRTIAHDRRSHGRSDQVWDGNTMDQYADDLAELIETLDLHDVILVGHSTGGGE
VTRYIGRHGTGRVAKIALIGAVPPLMLKTEANPGGLPIAAFDAIREGTYANRSQFFLD
LTAPFYGFNREGKTINEGLRQEFWREGMMGGLKGQLDSIRAFSASDFHEDLARFDRPT
LVIHGDDDQIVPIGASALETIKIVKDAVLKLYEGADHGLAQTHQDRFNADLLAFIRN"
misc_feature 149722..149949
/locus_tag="PP1Y_Mpl1525"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature 149770..150498
/locus_tag="PP1Y_Mpl1525"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:205026"
misc_feature <150295..150516
/locus_tag="PP1Y_Mpl1525"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene 150580..151359
/locus_tag="PP1Y_Mpl1536"
/db_xref="GeneID:10718002"
CDS 150580..151359
/locus_tag="PP1Y_Mpl1536"
/inference="protein motif:COG:COG0300"
/inference="similar to AA sequence:UniProt:A9CF95"
/note="KEGG: atu:Atu3464"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="YP_004538093.1"
/db_xref="GI:334144884"
/db_xref="GeneID:10718002"
/translation="MNKGTYLITGASDGIGAVYADRLARRGHDLVLVARRGDRLADLA
SRLSAKTGVQVEIIAADLADPDGLATVEARLRDDETIIGLVNNAGIAGETTLVDADPA
HLTSLVNLNVLAVTRLTAAIAPRLSSGKSGTIINITSVTALMPDGFTAAYPASKAYVL
AFTEAVAAELTPKGVRVQAVLPGITRTAIWSDEQMAHVDPEMVMDVDDMVDAALAGLD
LGERITIPALPDNSGLEAFLTARGALRPGLSLREPAPRYRL"
misc_feature 150580..151353
/locus_tag="PP1Y_Mpl1536"
/note="Short-chain dehydrogenases of various substrate
specificities [General function prediction only]; Region:
DltE; COG0300"
/db_xref="CDD:30648"
misc_feature 150601..>151146
/locus_tag="PP1Y_Mpl1536"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(150607..150609,150613..150618,150622..150624,
150679..150687,150838..150846,150988..150996,
151033..151035,151045..151047,151123..151134)
/locus_tag="PP1Y_Mpl1536"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(150910..150912,150994..150996,151033..151035,
151045..151047)
/locus_tag="PP1Y_Mpl1536"
/note="active site"
/db_xref="CDD:187535"
gene 151384..152166
/locus_tag="PP1Y_Mpl1544"
/db_xref="GeneID:10718003"
CDS 151384..152166
/locus_tag="PP1Y_Mpl1544"
/inference="protein motif:COG:COG0596"
/inference="similar to AA sequence:UniProt:Q98LK0"
/note="KEGG: mlo:mlr0992"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538094.1"
/db_xref="GI:334144885"
/db_xref="GeneID:10718003"
/translation="MGTSKPTGTIVLIHGAWLNSHSWERVKTRYEAKGFTVIAPDWPL
DDRSPEELRAAPSPGLAELGQRQIVDHYERIIKTLPEAPILIGHSLGGVFVQHLLDRG
LGSAGVAIDPAPTPGVPIHLRALVSALPVFLDPFSRSKVKTMSRRFFRNRFAQTVTAD
NADALYDRYIVPTPGRVYWDGIVNPMRIDWTNPARPPLLLISGGKDLIADASMTRAIY
REQRRAPSRTEYVEFPFRSHWTLLDEGWEEVADAALAWATTA"
misc_feature 151390..>151680
/locus_tag="PP1Y_Mpl1544"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature 151411..152130
/locus_tag="PP1Y_Mpl1544"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:205026"
gene complement(152318..153115)
/locus_tag="PP1Y_Mpl1556"
/db_xref="GeneID:10718004"
CDS complement(152318..153115)
/locus_tag="PP1Y_Mpl1556"
/EC_number="2.7.7.7"
/inference="protein motif:COG:COG0847"
/inference="similar to AA sequence:UniProt:A4WYE4"
/note="assigned by KAAS to KEGG Orthology:K02342 DNA
polymerase III subunit epsilon"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit epsilon"
/protein_id="YP_004538095.1"
/db_xref="GI:334144886"
/db_xref="GeneID:10718004"
/translation="MVDVETACARVSSVCQIGIVGFRDGNEVFAYETLIDPKDEFSPF
NVGIHGISPEHVAGKPTFSAIHGIVAAHLTGRVTVAHSGFDKGALSAACRIGNLPFIE
TTWLDSVRVAKKAWPQLPNHRLNTLADYLKIRHRHHDALSDARAAGAVIVRAIAETGI
DLSGWLAKPAKPGKAPRAAETGPLKGHRIAILGERRDEALAQFLAAHGARVVSSVGTT
TTMLVISTHQPFGRWEAAQAEHRKAEKLRDAGAGIEIVTEADLRARL"
misc_feature complement(152336..153112)
/locus_tag="PP1Y_Mpl1556"
/note="DNA polymerase III subunit epsilon; Validated;
Region: PRK06195"
/db_xref="CDD:180459"
misc_feature complement(152687..153112)
/locus_tag="PP1Y_Mpl1556"
/note="an uncharacterized bacterial subgroup of the DEDDh
3'-5' exonuclease domain family with similarity to the
epsilon subunit of DNA polymerase III; Region:
DNA_pol_III_epsilon_like; cd06130"
/db_xref="CDD:99834"
misc_feature complement(order(152687..152689,152702..152704,
152861..152869,152870..152875,153092..153094,
153098..153109))
/locus_tag="PP1Y_Mpl1556"
/note="active site"
/db_xref="CDD:99834"
misc_feature complement(order(152687..152689,152702..152704,
152864..152869,152870..152875,153092..153094,
153098..153109))
/locus_tag="PP1Y_Mpl1556"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:99834"
misc_feature complement(order(152687..152689,152702..152704,
152861..152863,153101..153103,153107..153109))
/locus_tag="PP1Y_Mpl1556"
/note="catalytic site [active]"
/db_xref="CDD:99834"
gene complement(153175..153927)
/locus_tag="PP1Y_Mpl1567"
/db_xref="GeneID:10718005"
CDS complement(153175..153927)
/locus_tag="PP1Y_Mpl1567"
/inference="protein motif:COG:COG3022"
/inference="similar to AA sequence:UniProt:A5VF37"
/note="KEGG: swi:Swit_4565"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538096.1"
/db_xref="GI:334144887"
/db_xref="GeneID:10718005"
/translation="MIALLSPAKTLDFERALPPLSATKPHFLEEAGSLAKSAANLSQK
RLSELMHISPRLAKLNADRFNNFETLPERPALFAFAGDVYTGFEAHTLDEAGVIFAQD
HVRMLSGLYGLLRPLDAIRPYRLEMGTRWAPRRKSLTDWWGDRIAELLCEQVNREGSG
EVLNLASQEYFAAVKGKLKGLRVIDVDFREPGPDGPRFVSFSAKRARGMMARWMCEHH
VTNIDDMRGFDSDGYRFDAEASGADNWRFTRA"
misc_feature complement(153208..153927)
/locus_tag="PP1Y_Mpl1567"
/note="Protein of unknown function (DUF328); Region:
DUF328; pfam03883"
/db_xref="CDD:146489"
gene complement(154091..155380)
/locus_tag="PP1Y_Mpl1574"
/db_xref="GeneID:10718006"
CDS complement(154091..155380)
/locus_tag="PP1Y_Mpl1574"
/EC_number="2.5.1.49"
/inference="protein motif:COG:COG2873"
/inference="similar to AA sequence:UniProt:Q2RSM0"
/note="assigned by KAAS to KEGG Orthology:K01740
O-acetylhomoserine (thiol)-lyase"
/codon_start=1
/transl_table=11
/product="O-acetylhomoserine (thiol)-lyase"
/protein_id="YP_004538097.1"
/db_xref="GI:334144888"
/db_xref="GeneID:10718006"
/translation="MADLKLETMTVHAGCEPDPTTNARITPIYQTASYVFDSAEHAAD
LFALKQFGNIYSRIMNPTNDALEKKIAALEGGVGALGVASGHAAQLVAFHTLMEPGCN
IVAARKLYGGSLNQMGEAFRKFGWETRFVDVDDPENVRAAIDEKTRCVFIESLANPGG
VVTDIAAIADIAHEGGVPLIVDNTMASPILCRPFEHGADIVTHSTTKFLNGHGNSVGG
VIVDSGRFDWKAQAHKFPSLTQPNGSYHGAILVDALAPVGPIAFIIACRVLGLRDLGP
ALAPQNAWLALTGMETLALRMERHCDNALAVAKWLDQHEKVEWVSYAALEGNRYKSLA
DKYLGGRGGAVFTFGLKGGFEAGVKLVSSVKLFSHLANIGDTRSLIIHPASTTHSQLE
GDELIAAGAGPDVVRISIGIEHIDDIIADLEMGLNRI"
misc_feature complement(154094..155368)
/locus_tag="PP1Y_Mpl1574"
/note="O-acetylhomoserine aminocarboxypropyltransferase;
Validated; Region: PRK05994"
/db_xref="CDD:180344"
misc_feature complement(154160..155317)
/locus_tag="PP1Y_Mpl1574"
/note="CGS_like: Cystathionine gamma-synthase is a PLP
dependent enzyme and catalyzes the committed step of
methionine biosynthesis. This pathway is unique to
microorganisms and plants, rendering the enzyme an
attractive target for the development of...; Region:
CGS_like; cd00614"
/db_xref="CDD:99738"
misc_feature complement(order(154295..154297,154535..154540,
154544..154546,154577..154579,154733..154735,
154739..154741,154763..154765,155027..155029,
155036..155038,155051..155053,155120..155125,
155129..155134,155210..155212,155216..155218,
155273..155278,155282..155293))
/locus_tag="PP1Y_Mpl1574"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99738"
misc_feature complement(order(154733..154735,154760..154765,
154769..154771,154835..154837,154922..154924,
155051..155053,155123..155131))
/locus_tag="PP1Y_Mpl1574"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:99738"
misc_feature complement(order(154760..154765,154769..154771,
154826..154828,154835..154837,155051..155053,
155123..155131))
/locus_tag="PP1Y_Mpl1574"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99738"
misc_feature complement(154760..154762)
/locus_tag="PP1Y_Mpl1574"
/note="catalytic residue [active]"
/db_xref="CDD:99738"
gene complement(156025..156435)
/locus_tag="PP1Y_Mpl1594"
/db_xref="GeneID:10718007"
CDS complement(156025..156435)
/locus_tag="PP1Y_Mpl1594"
/inference="protein motif:COG:COG5649"
/inference="similar to AA sequence:UniProt:A8I600"
/note="KEGG: mes:Meso_0627"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538098.1"
/db_xref="GI:334144889"
/db_xref="GeneID:10718007"
/translation="MSDRNSSSAMIDAKLESLGDWRGDMLARVRKLIHEADPEVVEAV
KWIKPTNPSGVPTWEHSGLICTGEVYKSYVKLTFARGAALEDPAGLFNAGFNGATRRA
IDLHEGAVVDGSAFKALVREAVALNAATQKPKRA"
misc_feature complement(156049..156420)
/locus_tag="PP1Y_Mpl1594"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG5649"
/db_xref="CDD:35208"
gene complement(156549..158534)
/locus_tag="PP1Y_Mpl1603"
/db_xref="GeneID:10718008"
CDS complement(156549..158534)
/locus_tag="PP1Y_Mpl1603"
/inference="protein motif:COG:COG1292"
/inference="similar to AA sequence:UniProt:A9VYL7"
/note="KEGG: mex:Mext_4403"
/codon_start=1
/transl_table=11
/product="choline/carnitine/betaine transporter"
/protein_id="YP_004538099.1"
/db_xref="GI:334144890"
/db_xref="GeneID:10718008"
/translation="MSDPVFETATPPKKLRLEVNAPVFYISAVLILAFALVGALFPEA
AGKVFGSVQAFIVEDFGWFYIASVAGFLIFVIFLMVSRHGDVKLGPDESEPEYSYLSW
FAMLFSAGMGIGLIFFGVAEPIQHYANPPIGEGGTVESAKQALVLTFFHWGLHAWAIY
IVVGLALAYFSFRRGLPLTIRSALYPLIGNRIYGPIGHAIDIFAVLGTMFGVATSLGL
GVLQVNAGFSYLFGLQVSTTVQLLLIAVITGLATMSVVLGLDKGVKRLSELNIVLAVL
LLGFVLVAGSTVFLLQAFVQNLGAYLGAVVQRTFRMYAYEPNPWLGDWTLFYWGWWIA
WSPFVGMFIARISRGRTIREFTTGVLLVPVLFTFLWMTVFGNTAIALDMGGLAPIART
VNDNLPVALFETLAQMPLSTITSFLATLLVITFFVTSADSGALVIDMITSGAAENPPV
WQRIFWAVCAGGVAAVLLVAGGLQALQTAAIASALPFAVVMIFICYGLFRALQMEQMG
TSIDLSLAEPNAPRAELGWQQRLSSIMHHYPPEDIRRFLSETARPALNAVAEQMQENG
FVPDVAESPEQLVLTVPHGERGAFRYTIRNRPFLLPSFVWAETRKAHEKEPRHYRAMA
HTSEGDQPHDVTGFTQDQLINDLLNRYARFRHARRIA"
misc_feature complement(157020..158468)
/locus_tag="PP1Y_Mpl1603"
/note="BCCT family transporter; Region: BCCT; pfam02028"
/db_xref="CDD:145290"
gene complement(158712..159554)
/locus_tag="PP1Y_Mpl1625"
/db_xref="GeneID:10718009"
CDS complement(158712..159554)
/locus_tag="PP1Y_Mpl1625"
/inference="protein motif:COG:COG0384"
/inference="similar to AA sequence:UniProt:Q7CUH5"
/note="KEGG: acr:Acry_0325"
/codon_start=1
/transl_table=11
/product="PhzF family phenazine biosynthesis protein"
/protein_id="YP_004538100.1"
/db_xref="GI:334144891"
/db_xref="GeneID:10718009"
/translation="MTASFQLIDVFGQEPFTGNPLAVVTSDYALDAAEMQQITRWLNL
SETTFLLPPTNKQADYRVRIFTLERELPFAGHPTLGTCHAWLTAGGMPRTSDIVVQEC
GAGLVALRRDGDTLAFAAPPTVRAGEVDEATLTEVAGVLGVDRSAIVDAQWVDNGPGW
VAVMLASADDVLALKPARSHGKRIDIGVVGFYPPGASVAYEVRAIFSDKFGGLIEDPV
TGSLNASLAQWLLASGQVHAPYTAAQGTALGRKGRIGVERDGEGQVWISGNTRTLASG
TIAV"
misc_feature complement(158715..159554)
/locus_tag="PP1Y_Mpl1625"
/note="Predicted epimerase, PhzC/PhzF homolog [General
function prediction only]; Region: COG0384"
/db_xref="CDD:30733"
gene complement(159551..160429)
/locus_tag="PP1Y_Mpl1633"
/db_xref="GeneID:10718010"
CDS complement(159551..160429)
/locus_tag="PP1Y_Mpl1633"
/inference="protein motif:COG:COG0697"
/inference="similar to AA sequence:UniProt:UPI0000F2FA9B"
/note="KEGG: bpy:Bphyt_4886"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538101.1"
/db_xref="GI:334144892"
/db_xref="GeneID:10718010"
/translation="MNRTSEGWIWGALGILIFSGSLPATRLAVISIDPWFLTAARAAI
AGVIGLALLIGLRQPWPARRDYAPLAVVSLGVIVGFPLLTALALRHIDTAHSILFTGL
LPLATAGFGVLRAGERPDPRFWLLALTGGGVVAGYALILQPGANLLGDGLMLAAIAIC
GLGYAEGGVLSRRLGGWQVICWALVLTLPVSLVAVAITRVPDWTMVGTAAWLGLGYVT
LFSMLIGFMCWYRGLALGGIAAVGQMQLLQPFAALALVAVLLRERIAPGMVVAMLAVL
ACVIGARHLSIRSTQS"
misc_feature complement(<159752..>160255)
/locus_tag="PP1Y_Mpl1633"
/note="putative DMT superfamily transporter inner membrane
protein; Provisional; Region: PRK11272"
/db_xref="CDD:183067"
gene 160393..161985
/locus_tag="PP1Y_Mpl1643"
/db_xref="GeneID:10718011"
CDS 160393..161985
/locus_tag="PP1Y_Mpl1643"
/inference="protein motif:COG:COG1167"
/inference="similar to AA sequence:UniProt:A9ANZ6"
/note="KEGG: ara:Arad_4508"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_004538102.1"
/db_xref="GI:334144893"
/db_xref="GeneID:10718011"
/translation="MPPISILRSSGSFSAPLSQPVDAGTQLGNRDSPVRFDQTVLHNL
TVQLLAESLMEHHPTLVSRVMADVRRRITARSLGPGAKLPSIRQMAEASGVSKSTVVE
AYERLVAEGAIVSRRGSGFFVTSHSEPLSLADIAPRLDRAIDPFWVSRQSLESGAQML
KPGCGWLPPDWLPQDDVRRALRALARDNQASLSDYGTPLGLPALRQLLARRMAERGID
SAPDQILLTESGTQAIDLLCRLLINPGDTVLVDDPCYFNFHALLHAHRANIVSVPMTP
EGIDIAAFEQALIGHAPKLYITNSGVHNPTGASPSLQTAHRLLKLADAHDLTIIEDDI
FADFEDEPAPRLAALDGLERVIHIGSFSKTLSASVRCGYIAIRRDWLDRLVDLSIAIS
FGASRLSSEVVLRVLQDGGYRRHLQSLRGRLGRARTDVTARLNDMGIEPWLKPRAGIF
LWCQLPEGIDAAELARAGLERGILLAPGNVFSLSRTAGRYMRVNVAQTGDPEIFDWLR
AATMPSDRRPAQSPPHTTQLAT"
misc_feature 160567..161901
/locus_tag="PP1Y_Mpl1643"
/note="Transcriptional regulators containing a DNA-binding
HTH domain and an aminotransferase domain (MocR family)
and their eukaryotic orthologs [Transcription / Amino acid
transport and metabolism]; Region: ARO8; COG1167"
/db_xref="CDD:31361"
misc_feature 160567..160764
/locus_tag="PP1Y_Mpl1643"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature order(160567..160569,160573..160575,160642..160644,
160648..160653,160675..160689,160693..160698,
160705..160707,160735..160740,160744..160755)
/locus_tag="PP1Y_Mpl1643"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature 160975..161880
/locus_tag="PP1Y_Mpl1643"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature order(161077..161085,161155..161157,161302..161304,
161395..161397,161470..161472,161476..161481,
161500..161502)
/locus_tag="PP1Y_Mpl1643"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature order(161086..161088,161185..161187,161374..161376,
161494..161502,161587..161589,161596..161598)
/locus_tag="PP1Y_Mpl1643"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature 161479..161481
/locus_tag="PP1Y_Mpl1643"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene complement(163103..163348)
/locus_tag="PP1Y_Mpl1675"
/db_xref="GeneID:10718012"
CDS complement(163103..163348)
/locus_tag="PP1Y_Mpl1675"
/inference="similar to AA sequence:UniProt:Q2G875"
/note="KEGG: nar:Saro_1507"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538103.1"
/db_xref="GI:334144894"
/db_xref="GeneID:10718012"
/translation="MVTANRNSPGQDTAITEECDQSLGRPQRRLLRRIYNGRTVPIIV
DGQSFLTYKQASRYLLSLLPDAREKAYVEMKDSAGGG"
gene complement(163444..164106)
/locus_tag="PP1Y_Mpl1679"
/db_xref="GeneID:10718013"
CDS complement(163444..164106)
/locus_tag="PP1Y_Mpl1679"
/inference="protein motif:COG:COG1309"
/inference="similar to AA sequence:UniProt:A4XEZ2"
/note="KEGG: nar:Saro_3644"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_004538104.1"
/db_xref="GI:334144895"
/db_xref="GeneID:10718013"
/translation="MNAPQDHLSGEAKVPAGGQRGRPSAETTRRRMAYLLDVARGMFV
RQGYRATTMDEVAAAAGVTKRTLYAWHADKQALFQACVIAGAERFPKLAPDAGGDLRS
GLEHYVFDLHDELSRADSYGMGLLAAGEAREFPEMREAILRGHLDYMIEPLAVFLRGH
GLEEDGALERTMLFVAMALSPLHNAMLVGLPLPTPGQVRDHARRCVGIFLGDPASCRA
PA"
misc_feature complement(163528..164043)
/locus_tag="PP1Y_Mpl1679"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature complement(163864..164004)
/locus_tag="PP1Y_Mpl1679"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 164238..165263
/locus_tag="PP1Y_Mpl1689"
/db_xref="GeneID:10718014"
CDS 164238..165263
/locus_tag="PP1Y_Mpl1689"
/inference="protein motif:COG:COG1063"
/inference="similar to AA sequence:UniProt:A4XEZ1"
/note="KEGG: nar:Saro_3643"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase"
/protein_id="YP_004538105.1"
/db_xref="GI:334144896"
/db_xref="GeneID:10718014"
/translation="MSLARVHGPGDVRLDTVPVPTCSPGEVLVRIAACGVCGSDLGYI
AQGGLGGGEPLTAPLPLGHEFAGTVVTIGPGVTGIAPGLRVAVNPDRAFIGGGGPDGA
MAPYVRVSGAELGETLFPLPDHLPFDEAALAEPLSVALHGLRVARVKAPDKVAILGAG
PIGLCALVMLTHLGLRDVAIFDRVDERLDRALALGAGLAINVRVESLTDALARFHGGG
KRFGSRYVDTDIFVDCAGSAPALAEALAVAKYRARVSVIALHHKPLPLDLWRLMANEI
TLSGSIADARAAEFGEAVAMLAQARQELSPLISHRIDFAGFHEALATAADAARAAKVV
LTFPEAA"
misc_feature 164238..165194
/locus_tag="PP1Y_Mpl1689"
/note="Threonine dehydrogenase and related Zn-dependent
dehydrogenases [Amino acid transport and metabolism /
General function prediction only]; Region: Tdh; COG1063"
/db_xref="CDD:31263"
misc_feature 164238..165176
/locus_tag="PP1Y_Mpl1689"
/note="Medium chain reductase/dehydrogenase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR; cl16912"
/db_xref="CDD:211475"
misc_feature order(164346..164354,164361..164363,164637..164639,
164649..164651,164709..164726,164781..164786,
164796..164798,164841..164843,164937..164942,
165015..165020,165078..165086)
/locus_tag="PP1Y_Mpl1689"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:176178"
gene 165260..166537
/locus_tag="PP1Y_Mpl1695"
/db_xref="GeneID:10718015"
CDS 165260..166537
/locus_tag="PP1Y_Mpl1695"
/inference="similar to AA sequence:UniProt:A4XEZ0"
/note="KEGG: nar:Saro_3642"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538106.1"
/db_xref="GI:334144897"
/db_xref="GeneID:10718015"
/translation="MTRLPAMIRIDDMADPVLTPALVAARQGPDDLPDFPTAAAILDL
AMAQTGLTDFGADTGFRERLTVILQSLYEDHGLSRGGRLSIVAQAIRVMANRLRIEDL
VRRHPEITDVPVERPIFIAGLPRSGTTHLVNWLSRDDRLNSLTLWEAEEPVPAAPVAP
GETDPRILRSAGVWAAFGAMLPHMSAMHEMAANDIHEDNELMFMDLNCYNWEFQARLP
RWIDHYLAHDRTESYAYEKKVLQVIAWHRGGQPGQPGRRRWLLKSPQHMENLSAIRAV
FPDATMVITHRDPVNVLRSLTTMLGYSDRIRRESIDPPALARLWADRIERLLRACVAQ
RKSWGPAQSLDVPFHDYMADQQGMARRIYALAGLDLPAETEARLTSYLSENPRHAHGK
VHYDLEGVFGMDEAALRQRFAFYYDRFPVRQEN"
gene 166540..167772
/locus_tag="PP1Y_Mpl1710"
/db_xref="GeneID:10718016"
CDS 166540..167772
/locus_tag="PP1Y_Mpl1710"
/inference="similar to AA sequence:UniProt:A4XEY9"
/note="KEGG: nar:Saro_3641"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538107.1"
/db_xref="GI:334144898"
/db_xref="GeneID:10718016"
/translation="MAASEQARARLVSGQAWDDFCDTLKLAGRHIAAFDGPLSDLDRA
EWYRFMTRLTRSSMERLIENAEPTRPRLRDMVWRQSINVQTVDQDHLMCQFDMARDYR
ITGTRGTIPYFVMAVLTCPAPAAPGAVDWAAQGIEGLKRFDPSNLKTTGFLASQQLHI
EPDGTFELILSQNDPGDGHNWLRLTPETNCIMIRLVWSNRAREVAPAMTIERIDHAAP
EPVTPALIADGLAWTGQAVLGYAELVRNWWQGAQGNFAARLNRLDYSRAQYLSNGGVP
DRHVAFGGWEKRADEALVLEFTPPPCEYWNFQLCNIWQENLDTFEDGNGWINNTRHLV
EPDGTVRVVIAEADPGVGGNWINSYGHERGIWGLRFVQTQATAQVRLWRVPLSALADR
GLATLEPAEAVATGQFVD"
gene 167780..168637
/locus_tag="PP1Y_Mpl1720"
/db_xref="GeneID:10718017"
CDS 167780..168637
/locus_tag="PP1Y_Mpl1720"
/inference="protein motif:COG:COG1082"
/inference="similar to AA sequence:UniProt:A4XEY8"
/note="KEGG: nar:Saro_3640"
/codon_start=1
/transl_table=11
/product="xylose isomerase domain-containing protein"
/protein_id="YP_004538108.1"
/db_xref="GI:334144899"
/db_xref="GeneID:10718017"
/translation="MKTITELVFCSPALPDVPLLDRLAPVAAAGFTALSLMPGDVWTL
EETGMAAPEIAARIADAGLKVAELDCTACWMPRQRTQGDSDPLAQFLRGLTPDKVVAT
AARIGAASLVAVDLSNTPAPLDEAAESFAELCDHAAEHDLPVQIEFLPVGGIRTLSEA
WAIVEAAGRANGGLTIDAWHFFRSGSTLDQLAKIPSDRIHTVQLCDAPVLPQGDLWTE
LMTARLLPGEGALDLAGLVRTLDGIGSSAPMGVEVFNIRQNNQSCAQVARDWANAARS
VLAKARGVA"
misc_feature 167816..168583
/locus_tag="PP1Y_Mpl1720"
/note="Sugar phosphate isomerases/epimerases [Carbohydrate
transport and metabolism]; Region: IolE; COG1082"
/db_xref="CDD:31279"
gene 168634..169755
/locus_tag="PP1Y_Mpl1730"
/db_xref="GeneID:10718018"
CDS 168634..169755
/locus_tag="PP1Y_Mpl1730"
/inference="protein motif:COG:COG0673"
/inference="similar to AA sequence:UniProt:A4XEY7"
/note="KEGG: nar:Saro_3639"
/codon_start=1
/transl_table=11
/product="oxidoreductase domain-containing protein"
/protein_id="YP_004538109.1"
/db_xref="GI:334144900"
/db_xref="GeneID:10718018"
/translation="MTTDKIGAAVVGTGFGLFTHVRALRDAGLEVRAIIGRDLEKTRT
RAAPLDIPLAANDLPRVLADDPAIRLVTVATPPLAHFTPVMQAIAAGHAVVCEKPFAR
DLAQAREMLAAAEQAGVIHALGAEFRFDSAQALLRRVVQSGTIGQPLMFHRIYQQPGG
DPDEPLAEWWLDATQGGGFLGAFGTHMIDQARGTVGEIARVSAVLRKLSPGRPTQTSD
DYYTIQFQTASGCMGLIEAALAFPGPFVMSTKVAGTAGTAWIQSGAAFGEPEQVWVQD
AQGARQVSMPDELVNAPPEPFPIDELVQTEMDRWHSQGFDVAPYAKLFAQVKARLEGR
DPPLPDPAGDFRDAAANQAILDAARRSDAERRWIDVEAI"
misc_feature 168646..169557
/locus_tag="PP1Y_Mpl1730"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature 168649..168993
/locus_tag="PP1Y_Mpl1730"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature 169057..169362
/locus_tag="PP1Y_Mpl1730"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; cl11611"
/db_xref="CDD:209369"
gene 169755..170504
/locus_tag="PP1Y_Mpl1737"
/db_xref="GeneID:10718020"
CDS 169755..170504
/locus_tag="PP1Y_Mpl1737"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A5VBI3"
/note="KEGG: nar:Saro_3638"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538110.1"
/db_xref="GI:334144901"
/db_xref="GeneID:10718020"
/translation="MGPRHDFSGAHVLITGGTSGIGAACAALLRDAGAEVTITGTRGG
PGDYDADLSGYRYLQLDIEDKTNIDAVAASLPRLDVLVNNAGIALPSLGLDEWEPDVF
NRAVAMLLNGAFRMAQRTVDLLAHSVIPGGGSVIAIASMSSFFGIPVVPGYGAAKTGL
VGLTRTMAAHWGPRGVRANAVAAGLTRSRMTADTFAQEAWTAPTLARTPLGRLGEAGD
IAQAIAFLASPAASWITGQTLAVDGGYTISG"
misc_feature 169770..170486
/locus_tag="PP1Y_Mpl1737"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05557"
/db_xref="CDD:180126"
misc_feature 169788..170480
/locus_tag="PP1Y_Mpl1737"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(169800..169802,169806..169817,169872..169880,
169932..169940,170004..170012,170076..170078,
170166..170174,170211..170213,170223..170225,
170301..170312,170316..170321)
/locus_tag="PP1Y_Mpl1737"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(170079..170081,170172..170174,170211..170213,
170223..170225)
/locus_tag="PP1Y_Mpl1737"
/note="active site"
/db_xref="CDD:212491"
gene complement(170787..173771)
/locus_tag="PP1Y_Mpl1756"
/db_xref="GeneID:10718021"
CDS complement(170787..173771)
/locus_tag="PP1Y_Mpl1756"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B4RF49"
/note="KEGG: pzu:PHZ_c0623"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538111.1"
/db_xref="GI:334144902"
/db_xref="GeneID:10718021"
/translation="MTACTRLNYLKASFLLTTCFAGVPVTQAQTVAPDEQPVSEIVVV
GSQIKNSKVAGELPVSVVSSEDIGAIAPTSASDLLQALPANGTMDFNGTDTVGNGVHS
ARGDVASVNLRSIGSGNTLVLLNGRRLVQHPGTQTEDSVPVSTVNMNALPISGIERME
VLHDGASAIYGSDAVAGVINTVLDDKFEGLRATGEMGFAENTDKMKFSGDLQGGWTFN
EGRTHVSLSLSYYQSSKVWARELDYSGASDRRPFVEDTDFAGDTSFDNRSSSTPWGQF
TASQAISGLTSSGGVFHIQPDTVSGCRTGLGSGLCIDDGSLDRDLRYNINQSRTMSPS
IKRGNAFAFITHDFGDFEFYSELGYYRARTEEYRGESSILSSAQFTISKDAYWNPLGA
LGNPNRISGFAIPDEGLDLTLTNYRVVDAGLRHIQVDNESYRLLGGFRGSLGNWDWDT
AALYSEATTKDITFDRVSNTLFSEALNRTDSSAYNPFNGGSLADPNWGDATANPQATI
DSFLVDVARFGKTTLALADFKVSNGSLLFLPAGDVGIALGGEWRRTSYREDYDDRLDG
TTNYIDAVTGDLVNASDIMGSSVASDSRGSRNVFSAFSELAVPLVSRDMEVPLVRALN
LQLAGRFEHYSDVGSVFRPKFAASWYPVDQLQLRASYAEGFRAPNLEQLNTEVTTRVS
TVIDYYRCQASVNKGDVASLGACSGNDRVEERRFGNRQLKPEKNASYSVGAVFTPTRE
LTFTVDYWHIKQRNLVGIFGAENIAALDYVSRLQGGSGVSGVLRADPTADDIAFYQGS
GLDPIGEMVQIDDIFTNLDTRTSAGIDFGLYYQPPETPLGSFNFKFNASYLEKAYQGL
SDQAALIRSTLGDAVPLEAVGDLIEKDGRPKWQASGTITWKSGGWGAGLFGRYVSSYY
DTGVVQDDTGEYWKVDDWFTMNLYLQHTFLDGPMEGTRVRFGVRNLLDSKPPFLDATY
GYDASLASAEGRFFYTSVQTRF"
misc_feature complement(<173073..173744)
/locus_tag="PP1Y_Mpl1756"
/note="Outer membrane cobalamin receptor protein [Coenzyme
metabolism]; Region: BtuB; COG4206"
/db_xref="CDD:33936"
misc_feature complement(173238..173600)
/locus_tag="PP1Y_Mpl1756"
/note="TonB-dependent Receptor Plug Domain; Region: Plug;
pfam07715"
/db_xref="CDD:203737"
misc_feature complement(170790..>172445)
/locus_tag="PP1Y_Mpl1756"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene 173939..174862
/locus_tag="PP1Y_Mpl1777"
/db_xref="GeneID:10718022"
CDS 173939..174862
/locus_tag="PP1Y_Mpl1777"
/inference="protein motif:COG:COG0583"
/inference="similar to AA sequence:UniProt:Q1NHV2"
/note="KEGG: pat:Patl_2788"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_004538112.1"
/db_xref="GI:334144903"
/db_xref="GeneID:10718022"
/translation="MRLRHIEVFHAVYEHGSISEAARALNVSQPSVSKVLRHAEDQLG
YELFQRTKGRLIATEPAHELFAEVSEVYTRLGRLTRTAKNIGNRKGGHLRVAVLPSIG
LAIAPRAIALFRERNPDVTFEITTLHSREVERFLYERECDVAIGYRISRQVHMRQTAL
GSAGLVLVSPRGAFGDESRAVPVEVLDGLDFVGLRDSGPLADVFVNELTRLGIAPREI
VTSHTYYTALALVRQGVGVTVADAFTAAAMAAPDLSCYGLAPDVSAPIGAVALESAAA
GELIDRFIETVREVIEDAAGHHEATLAGRSS"
misc_feature 173945..174805
/locus_tag="PP1Y_Mpl1777"
/note="DNA-binding transcriptional regulator LysR;
Provisional; Region: PRK11013"
/db_xref="CDD:182899"
misc_feature 173945..174115
/locus_tag="PP1Y_Mpl1777"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 174212..174799
/locus_tag="PP1Y_Mpl1777"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cd05466"
/db_xref="CDD:176102"
misc_feature order(174257..174262,174266..174271,174278..174280,
174290..174292,174296..174316,174590..174607,
174623..174628,174632..174637)
/locus_tag="PP1Y_Mpl1777"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 175093..176409
/locus_tag="PP1Y_Mpl1792"
/db_xref="GeneID:10718023"
CDS 175093..176409
/locus_tag="PP1Y_Mpl1792"
/EC_number="3.4.11.19"
/inference="protein motif:COG:COG1680"
/inference="similar to AA sequence:UniProt:Q4KAK3"
/note="assigned by KAAS to KEGG Orthology:K01266
D-aminopeptidase"
/codon_start=1
/transl_table=11
/product="D-aminopeptidase"
/protein_id="YP_004538113.1"
/db_xref="GI:334144904"
/db_xref="GeneID:10718023"
/translation="MACAQSREAAIRATLVDPDHSVAPGCVAGVFQNGNLRQSAASGF
ADLASQRPLDSTTLFYGASLSKQFTALAAATLIAQGKLGLEDNVRSYLPELPAYARPV
KVEMLMHHTSGIRDSLGLLRLAGMADVGRASKEQTLDLLFRQTDTAFVPGTQYSYSNG
GYLLLAEIVARVSGQPFAQYARQVLFDPMGMKHAYFLDDGSPRPGTFAHGYVPEGDAF
AARDTFPRFSGSGGLMLSLQDLARYERDIEHRHRVWTEAVAKIMLTPGRLADGTPIDD
GKGLAYGGGLHMGRLGGESIVRHGGSAEAFKHAYVRLPERHAAFAVLCNRGDWKAAEK
LDEVMAAAGTSPPGYPKAYPSGRFHSKELDSDYTLVREGSALLARITSPLVAAPRTVR
FEPGEDGAFHAGAMSLWPGTSPDKISVSRGQSGRIPLTRRTGLEVP"
misc_feature 175120..176070
/locus_tag="PP1Y_Mpl1792"
/note="Beta-lactamase class C and other penicillin binding
proteins [Defense mechanisms]; Region: AmpC; COG1680"
/db_xref="CDD:31866"
misc_feature 175144..176100
/locus_tag="PP1Y_Mpl1792"
/note="Beta-lactamase; Region: Beta-lactamase; pfam00144"
/db_xref="CDD:201034"
gene 176406..178007
/locus_tag="PP1Y_Mpl1804"
/db_xref="GeneID:10718024"
CDS 176406..178007
/locus_tag="PP1Y_Mpl1804"
/EC_number="3.5.1.81"
/inference="protein motif:COG:COG3653"
/inference="similar to AA sequence:UniProt:B7YZ39"
/note="KEGG: vap:Vapar_4361"
/codon_start=1
/transl_table=11
/product="N-acyl-D-amino-acid deacylase"
/protein_id="YP_004538114.1"
/db_xref="GI:334144905"
/db_xref="GeneID:10718024"
/translation="MIANKSTLCALAILAAAGVPAPALSHDAPEETTVIRGGTIYDGT
SETPIVGDVVIAREQIVYVGPSRKPAAGARIVDAKGMIVAPGFIDPHTHAQRFLDSED
GEGRLNLPWLMQGVTTIFSGVDGGGTPEVAAFLDDMEARTFATNVATYVGFGPVRRAV
LGNAARSPNEAELQAMKDLVAQGMCEGALGLSTGLFYAPQSFARTGEVTALAREAARR
GGVYDTHQRDEATYTIGVAASVNEALTIGREAGLPVHFAHIKVLGVDVQGKSGEIIEQ
IEKARAAGQDVTADQYPWDASGTSLQAALLPGWAQDGGRSALLGRIDDPATRGKIEAA
MTENMRRRGGPHALLLTDPGHEWTSMRLDEIAARWKVDPIAAALRIIRDGDRSGKLVS
FNMAEKDIAAFMRRPWVVTSSDGSEGHPRMYANFPRKYAKYVKQDKVIDLATFINSST
GRTADMFGLADRGHLKPGYKADVVVFDPEGYRPVATYTAPRELSEGVRDLFVNGQAAI
LDGKLTGLAPGQAIRHRPPPGTCPS"
misc_feature 176502..>177392
/locus_tag="PP1Y_Mpl1804"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have a...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:206955"
misc_feature 176505..177983
/locus_tag="PP1Y_Mpl1804"
/note="N-acyl-D-aspartate/D-glutamate deacylase [Secondary
metabolites biosynthesis, transport, and catabolism];
Region: COG3653"
/db_xref="CDD:33451"
misc_feature order(176676..176678,176682..176684,177078..177080,
177177..177179,177351..177353)
/locus_tag="PP1Y_Mpl1804"
/note="active site"
/db_xref="CDD:30035"
misc_feature <177594..177962
/locus_tag="PP1Y_Mpl1804"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have a...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:206955"
gene 178199..179395
/locus_tag="PP1Y_Mpl1818"
/db_xref="GeneID:10718025"
CDS 178199..179395
/locus_tag="PP1Y_Mpl1818"
/EC_number="1.4.99.1"
/inference="protein motif:COG:COG0665"
/inference="similar to AA sequence:UniProt:B5ZNR4"
/note="assigned by KAAS to KEGG Orthology:K00285
D-amino-acid dehydrogenase"
/codon_start=1
/transl_table=11
/product="D-amino-acid dehydrogenase"
/protein_id="YP_004538115.1"
/db_xref="GI:334144906"
/db_xref="GeneID:10718025"
/translation="MCTAYALARRGLSVALVDAASGPAQGTSFANGAQLSYAYTDALA
QPSLLRKIPAMIAGLDPAFRVRLSADPAFLRWGLSFLRNCSDARFSANTLAALQLGLE
SRAAMADLQARHGFDFAHAAMGKLHIFRDAEALERAKRVAVMKQVAGAEQFILTRQEA
IDVEPALIDTQGFDGALWTPSEEVGDPHRFCLGLLEVLRKQYPVRDHFNFSIAKLERR
GDRMLVHDNQGRSLAGRSAVVCLGADAPRFLGRLGIRAPIRPMKGYSFTVPPGSNAPS
VSLTDTGRKIVFCRLGSSMRIAGLAELDNRDLRVEPARLSALVEGARQSMPLAADYEA
IGEGWTGLRPMTPDSRPIIRQAAPGLFLNIGHGMLGWTFAAGSAERVAALVNAARSRT
PHFETV"
misc_feature 178205..179353
/locus_tag="PP1Y_Mpl1818"
/note="D-amino acid dehydrogenase small subunit;
Validated; Region: PRK00711"
/db_xref="CDD:179093"
gene 179414..179761
/locus_tag="PP1Y_Mpl1832"
/db_xref="GeneID:10718026"
CDS 179414..179761
/locus_tag="PP1Y_Mpl1832"
/inference="protein motif:COG:COG0251"
/inference="similar to AA sequence:UniProt:A6V2V0"
/note="KEGG: pfl:PFL_0804"
/codon_start=1
/transl_table=11
/product="endoribonuclease"
/protein_id="YP_004538116.1"
/db_xref="GI:334144907"
/db_xref="GeneID:10718026"
/translation="MTTKSSPPLSRFRRAGDLVFTSGQLPRGADGAIVPGDIRVQTRQ
ALANLEAVLSEAGARLDQVTKVTAWLTDAAHMAGFNEVYREVFAQPYPARSTVISGLV
AGDVEIEAVACLA"
misc_feature 179441..179749
/locus_tag="PP1Y_Mpl1832"
/note="YjgF, YER057c, and UK114 belong to a large family
of proteins present in bacteria, archaea, and eukaryotes
with no definitive function. The conserved domain is
similar in structure to chorismate mutase but there is no
sequence similarity and no...; Region:
YjgF_YER057c_UK114_family; cd00448"
/db_xref="CDD:100004"
misc_feature order(179441..179443,179450..179452,179456..179458,
179465..179467,179471..179473,179477..179482,
179597..179599,179603..179608,179612..179614,
179618..179620,179651..179653,179660..179662,
179687..179704,179705..179707,179732..179734,
179738..179740,179744..179746)
/locus_tag="PP1Y_Mpl1832"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100004"
misc_feature order(179639..179641,179651..179653,179693..179695,
179732..179734)
/locus_tag="PP1Y_Mpl1832"
/note="putative active site [active]"
/db_xref="CDD:100004"
gene complement(179867..181105)
/locus_tag="PP1Y_Mpl1837"
/db_xref="GeneID:10718027"
CDS complement(179867..181105)
/locus_tag="PP1Y_Mpl1837"
/inference="protein motif:COG:COG1301"
/inference="similar to AA sequence:UniProt:Q2N7X9"
/note="assigned by KAAS to KEGG Orthology:K11103 aerobic
C4-dicarboxylate transport protein"
/codon_start=1
/transl_table=11
/product="aerobic C4-dicarboxylate transport protein"
/protein_id="YP_004538117.1"
/db_xref="GI:334144908"
/db_xref="GeneID:10718027"
/translation="MIRGWFRIALWKRVLAALVLGIAAGVLLGEQAQSIKWIGDLFIR
AIKMLVVPLIFFSLVSGITAVGDVGRLGKVGGRALGLFMLTAFIAVSLGMGLAALVQP
GAGLTITLPTGSAVPPPPDQSLVAMIIGLVPENPIMAMAQGAILPVIIFAVLFGVAIL
ASGEEGAPLARAMNAGSTVMQNMTIYVMELTPFGVFALIAWVAGTFGFDALIPLSKLV
ALNYVGCAIILGIVYPLILRLIARLPIIDFYRGVVDAQAVAFSTASSNAALPVTLRCV
ERNLGVSNSIASFTVALGATINMNGTAMYLGVIALFGAQAYGIELNWFSYVLIALTST
LGAIGAAGVPGSGLVMMSLVLSSIGVPLETIAFVAGINHLLDMARTMTNVTGDATVAV
AVGRMAGEIDVEEYISADDV"
misc_feature complement(179957..181018)
/locus_tag="PP1Y_Mpl1837"
/note="Sodium:dicarboxylate symporter family; Region: SDF;
pfam00375"
/db_xref="CDD:201189"
misc_feature complement(179870..181012)
/locus_tag="PP1Y_Mpl1837"
/note="Na+/H+-dicarboxylate symporters [Energy production
and conversion]; Region: GltP; COG1301"
/db_xref="CDD:31492"
gene complement(181455..184031)
/locus_tag="PP1Y_Mpl1848"
/db_xref="GeneID:10718028"
CDS complement(181455..184031)
/locus_tag="PP1Y_Mpl1848"
/inference="protein motif:COG:COG2898"
/inference="similar to AA sequence:UniProt:Q2G7Y6"
/note="KEGG: nar:Saro_1597"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538118.1"
/db_xref="GI:334144909"
/db_xref="GeneID:10718028"
/translation="MALSRWRKPLGAVLTLILGCLGLFALHKLLGEISFREARAAFHG
IPAWRLGTAIGLTALSYLFLTLYDVTALRIVGRRVPYRTAGLASFTSYALSHNLGLGL
LTGGTARYRIYSSGGVGGADVARIIGLAGMTFWLGLVVMTGLALAANPDAPELVGLPL
PGFLVRGLGIAVLAAVAAALFAVRHSGRVISVAGWTMPMPSARQALGQIVVACCDMAA
ASAALFVLVPGIGLSLFPVLFLAYVLAVVIALISHVPGGIGVFEAVILALLPQVERPE
LLGALIAYRVIYYLLPLVLAAAVLAIQEHRQWRGSVGSILGHSQFVATSLSPILLSML
TFGGGAMLLVSGALPGLHDRLQILRRVLPLPFTEASHIAASLSGTALLLLAPGLYQRQ
DGAFHLARIILLAGAAFSLLKGLDYEEATVLLVIAGLLQWTRAAFYRRSSLTSASLSR
DWLVAVALALGLSFWIGLFAYKHVAYQSELWWDFAWRGNAPRFLRASFASSVLLTAAA
LHWLFRTREVVDEASLRALPEATEPMALSDRTYAALAYCGDKRFLVSSEGDAFVMYQV
QGQSWIVMGDPVGNRDSWSDLLWRLRDLCDRSQGRLLLYQLSDRALPLAIDLGLQLIK
YGEDARVDLDRFSLDVSEARSLRYSERRARREGAIFEIVPAAQVPSILGDLEIVSKAW
LRAKGQAEKAFSIGAFDRQYMSKFDCAVVRQEGRIVAFANIWKTDDRGELSVDLMRHA
DEMPYGTMDFLFIHLMLWGRQNGYRWFNLGLAPLSGIEAGRLAPVWARLGHLLYKHGE
AQYGFEGLRAYKEKFLPCWDSSYIAGPPGIGLVRALFDLQKLVGGGRDSAARKARLSL
VA"
misc_feature complement(183165..184031)
/locus_tag="PP1Y_Mpl1848"
/note="Predicted integral membrane protein [Function
unknown]; Region: COG0392"
/db_xref="CDD:30741"
misc_feature complement(183165..183968)
/locus_tag="PP1Y_Mpl1848"
/note="Uncharacterized protein family (UPF0104); Region:
UPF0104; pfam03706"
/db_xref="CDD:202732"
misc_feature complement(181500..183056)
/locus_tag="PP1Y_Mpl1848"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG2898"
/db_xref="CDD:32723"
misc_feature complement(181563..182423)
/locus_tag="PP1Y_Mpl1848"
/note="Uncharacterized conserved protein (DUF2156);
Region: DUF2156; pfam09924"
/db_xref="CDD:204341"
gene complement(184064..184477)
/locus_tag="PP1Y_Mpl1872"
/db_xref="GeneID:10718029"
CDS complement(184064..184477)
/locus_tag="PP1Y_Mpl1872"
/inference="protein motif:COG:COG4731"
/inference="similar to AA sequence:UniProt:A5VFR5"
/note="KEGG: swi:Swit_4794"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538119.1"
/db_xref="GI:334144910"
/db_xref="GeneID:10718029"
/translation="MLPLLASLAFLAAGLSSQTNAAFAQVPPSLHGVWVNPSGTVKVE
TGSCADRLCGWVVWASPDAIDDAREGGTEHLLGTRVLSEYDRVAPGTWQGNVFVPDHG
ATFFSKIREIDGDSIRISGCLLHGLLCKSQVWRRA"
misc_feature complement(184070..184384)
/locus_tag="PP1Y_Mpl1872"
/note="Uncharacterized protein conserved in bacteria
(DUF2147); Region: DUF2147; pfam09917"
/db_xref="CDD:204338"
gene complement(184561..185292)
/locus_tag="PP1Y_Mpl1877"
/db_xref="GeneID:10718031"
CDS complement(184561..185292)
/locus_tag="PP1Y_Mpl1877"
/inference="protein motif:COG:COG3946"
/inference="similar to AA sequence:UniProt:A5VFS2"
/note="KEGG: swi:Swit_4801"
/codon_start=1
/transl_table=11
/product="type IV secretory pathway VirJ component-like
protein"
/protein_id="YP_004538120.1"
/db_xref="GI:334144911"
/db_xref="GeneID:10718031"
/translation="MKKLLIALAAVLAAGAGFLGYIGYFGGETFVPVAANPQAGNPAG
GLAAVVLSGDMGFRMGMGPKIAARLAADGIPVIGVNSLVYFRHRRSPLEVRNLVATAI
EKALEFGRADRVVLVGQSFGSDMIPVALSAMPGPVRAKIAKVIMVVPTDTLFLRASPS
EMFNWSKPDADAIPGARRLTWIPVVCVSGARETTSLCPYMDQPNVVHVKLPGGHYLNG
DVDALHRVISDAIYSARVASVKERG"
misc_feature complement(184591..185148)
/locus_tag="PP1Y_Mpl1877"
/note="Bacterial virulence protein (VirJ); Region: VirJ;
pfam06057"
/db_xref="CDD:114761"
gene 185624..185986
/locus_tag="PP1Y_Mpl1891"
/db_xref="GeneID:10718032"
CDS 185624..185986
/locus_tag="PP1Y_Mpl1891"
/EC_number="1.3.1.74"
/inference="similar to AA sequence:UniProt:UPI000190419A"
/note="KEGG: tgr:Tgr7_2953"
/codon_start=1
/transl_table=11
/product="2-alkenal reductase"
/protein_id="YP_004538121.1"
/db_xref="GI:334144912"
/db_xref="GeneID:10718032"
/translation="MLSLAAVTLGLFFGAQKLAVHGIIRPAHRDALPGFTIARATPRS
GGLVVTSVRTDSEAQALGMAAGDRLVAVDEKSVKSISDARRDVANAKGPRLHLDLVRD
HIRRTLILQHKTDRHNEP"
misc_feature 185765..185956
/locus_tag="PP1Y_Mpl1891"
/note="PDZ domain of bacterial and plant zinc
metalloprotases, presumably membrane-associated or
integral membrane proteases, which may be involved in
signalling and regulatory mechanisms. May be responsible
for substrate recognition and/or binding, as most PDZ...;
Region: PDZ_metalloprotease; cd00989"
/db_xref="CDD:29046"
gene 185976..186659
/locus_tag="PP1Y_Mpl1894"
/db_xref="GeneID:10718033"
CDS 185976..186659
/locus_tag="PP1Y_Mpl1894"
/inference="protein motif:COG:COG0745"
/inference="similar to AA sequence:UniProt:A6X2C4"
/note="assigned by KAAS to KEGG Orthology:K02483
two-component system, OmpR family, response regulator"
/codon_start=1
/transl_table=11
/product="two-component system OmpR family response
regulator"
/protein_id="YP_004538122.1"
/db_xref="GI:334144913"
/db_xref="GeneID:10718033"
/translation="MSHKILLVEDDEATAAYICKGLNEAGFTVDHATDGRDGFFQASD
GTYQTIILDRMLPGLDGLAVLNALRAAGIETPVIFLSALGTSDDRVEGLLAGSDDYLA
KPFAFAELLARLRLLLRKGSAPQAETKLTCRDLEVDLLSRKVRRAGVPVDLQPREFRL
LEYLMRHANQVVTRTMLLEGVWDYHFDPGTNVVDVHISRLRKKIDNASGEPLLHTVRG
AGYLLGAER"
misc_feature 185988..186644
/locus_tag="PP1Y_Mpl1894"
/note="heavy metal response regulator; Region:
cztR_silR_copR; TIGR01387"
/db_xref="CDD:130454"
misc_feature 185991..186302
/locus_tag="PP1Y_Mpl1894"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(186000..186005,186132..186134,186156..186158,
186216..186218,186273..186275,186282..186287)
/locus_tag="PP1Y_Mpl1894"
/note="active site"
/db_xref="CDD:29071"
misc_feature 186132..186134
/locus_tag="PP1Y_Mpl1894"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(186141..186146,186150..186158)
/locus_tag="PP1Y_Mpl1894"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 186282..186290
/locus_tag="PP1Y_Mpl1894"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 186363..186644
/locus_tag="PP1Y_Mpl1894"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature order(186435..186437,186492..186497,186549..186551,
186558..186560,186582..186587,186618..186620,
186633..186635)
/locus_tag="PP1Y_Mpl1894"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 186663..188075
/locus_tag="PP1Y_Mpl1902"
/db_xref="GeneID:10718034"
CDS 186663..188075
/locus_tag="PP1Y_Mpl1902"
/inference="protein motif:COG:COG0642"
/inference="similar to AA sequence:UniProt:A5FVP4"
/note="KEGG: swi:Swit_4799"
/codon_start=1
/transl_table=11
/product="integral membrane sensor signal transduction
histidine kinase"
/protein_id="YP_004538123.1"
/db_xref="GI:334144914"
/db_xref="GeneID:10718034"
/translation="MRRLFFLPRSTIARLVAMLVVAQFAATAGILYFVRLSTQETLLS
EQKAVVAELRDGLLAEYRKEGKPALVAAIRDRLQFPQSGIPVILLLNADGSVAAGNLD
NWPPVIGETTEWTTLTLYRKDATAPEAMAFSASTLSDGSHLLTGHVIENGLQLQKIND
EALLAATLLAFPISLLIALQVGRSIARRIASIARTAEAIGAGDLSHRVPLNGTHDAFD
QMGSGINEMLERIELLVEELRMVTDSLAHDLRSPVTRLKSHIEQAFADTRDADDLAVL
EKISAEADTLLRMLTTALQISRAEAGIGRERFETVALGDLLQDLAEIYGPLAEDCGFS
LEATFAAPIAISLHRDLISQALGNLIENACKYARGGTSIRLEARRDENAVVLVVADDG
VGIPAELREVALRRFGRLDPARHKPGAGLGLALVASTARLHGGIFNLEDNRPGLRAVI
RLPGQDGERETVPPANMTKM"
misc_feature <187089..187967
/locus_tag="PP1Y_Mpl1902"
/note="heavy metal sensor kinase; Region: cztS_silS_copS;
TIGR01386"
/db_xref="CDD:162333"
misc_feature 187392..187556
/locus_tag="PP1Y_Mpl1902"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(187395..187397,187407..187409,187416..187418,
187428..187430,187437..187439,187485..187487,
187497..187499,187506..187508,187518..187520,
187527..187529,187539..187541)
/locus_tag="PP1Y_Mpl1902"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 187401..187403
/locus_tag="PP1Y_Mpl1902"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 187716..188018
/locus_tag="PP1Y_Mpl1902"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(187734..187736,187746..187748,187755..187757,
187824..187826,187830..187832,187836..187838,
187842..187847,187920..187931,187977..187979,
187983..187985,187995..188000,188004..188006)
/locus_tag="PP1Y_Mpl1902"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 187746..187748
/locus_tag="PP1Y_Mpl1902"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(187836..187838,187842..187844,187920..187922,
187926..187928)
/locus_tag="PP1Y_Mpl1902"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 188686..189786
/locus_tag="PP1Y_Mpl1922"
/db_xref="GeneID:10718035"
CDS 188686..189786
/locus_tag="PP1Y_Mpl1922"
/inference="protein motif:COG:COG0579"
/inference="similar to AA sequence:UniProt:B6IYF0"
/note="KEGG: swi:Swit_4544"
/codon_start=1
/transl_table=11
/product="FAD dependent oxidoreductase"
/protein_id="YP_004538124.1"
/db_xref="GI:334144915"
/db_xref="GeneID:10718035"
/translation="MDRADAVVVGAGVVGLAIAETLARNGSAALILDGEPHFGSWTSS
RNSEVIHAGIYYPEDSLKARLCVEGRDRLYAFCQSAGVPHKRLGKIIFAHSPDQSGNL
DAIVRAADAAGAGKLERLTRSQAKRLEPELEVADALLSPQTGIIDAHAYMQALIGSAE
THGARLVCSTKVTRALRRNEMWQIWIEGMNEPVLETPILVNSGGLAAQVLARSIEDLP
ASRVPPLHFARGVYFTYSGRTPFSHLIYPVPEPGGLGTHLTLDLAGQARFGPDVEWID
NIDYSVDPARKDKFARSAMRIWPKLDPTRLQPGYAGIRPKISAPGETAADFMIEGPQD
HGLPGLVNLFGIESPGLTASMAIGEWVARKLE"
misc_feature 188761..189780
/locus_tag="PP1Y_Mpl1922"
/note="hydroxyglutarate oxidase; Provisional; Region:
PRK11728"
/db_xref="CDD:183292"
gene 190269..190715
/locus_tag="PP1Y_Mpl1943"
/db_xref="GeneID:10718036"
CDS 190269..190715
/locus_tag="PP1Y_Mpl1943"
/EC_number="1.8.1.8"
/inference="protein motif:COG:COG0526"
/inference="similar to AA sequence:UniProt:A4XEF0"
/note="assigned by KAAS to KEGG Orthology:K03672
thioredoxin 2"
/codon_start=1
/transl_table=11
/product="thioredoxin 2"
/protein_id="YP_004538125.1"
/db_xref="GI:334144916"
/db_xref="GeneID:10718036"
/translation="MTQNALRIVICPACATANRVPVAKLGAGGKCGKCGSPLFEGAPL
TLTSANFDAHASRSDIPLLIDFWASWCGPCRQMAPAFAAAAPQLEPYMRLGKLDTEAE
RAIASRYAIQSIPTLAVISKGREVARQAGAMPANAIVAWARRATGQ"
misc_feature 190296..190691
/locus_tag="PP1Y_Mpl1943"
/note="thioredoxin 2; Provisional; Region: PRK10996"
/db_xref="CDD:182889"
misc_feature 190413..190691
/locus_tag="PP1Y_Mpl1943"
/note="TRX family; composed of two groups: Group I, which
includes proteins that exclusively encode a TRX domain;
and Group II, which are composed of fusion proteins of TRX
and additional domains. Group I TRX is a small ancient
protein that alter the redox...; Region: TRX_family;
cd02947"
/db_xref="CDD:48496"
misc_feature order(190479..190481,190488..190490)
/locus_tag="PP1Y_Mpl1943"
/note="catalytic residues [active]"
/db_xref="CDD:48496"
gene 191115..192149
/locus_tag="PP1Y_Mpl1955"
/db_xref="GeneID:10718037"
CDS 191115..192149
/locus_tag="PP1Y_Mpl1955"
/inference="protein motif:COG:COG0738"
/inference="similar to AA sequence:UniProt:A5PB16"
/note="assigned by KAAS to KEGG Orthology:K02429 MFS
transporter, FHS family, L-fucose permease"
/codon_start=1
/transl_table=11
/product="MFS transporter FHS family L-fucose permease"
/protein_id="YP_004538126.1"
/db_xref="GI:334144917"
/db_xref="GeneID:10718037"
/translation="MGYMRGAAIGLLTMMAGCLLFIPASASATFGVFLFALFILAAGV
TIVQVVANPLISLLGPVKTTHSRLTFAQAFNSLGTTIFPYVGTIIMLGGLAAVSAADL
SGAELAAYRVAETAAIERAYLGLAAALAVIAGVVWFNRNRLKGEKHEGGSILKSFDLM
RRLRFGFGASCIFLYVGAEVAIGSFIVNYMMQENVLGLTEQAAGKLIPFYWGGALVGR
FIGSALLRMVSPGKILSFNAACAIGLILISTHTTGMVSGYTYLAIGLMNSIMFPTIFS
LACEGLGKRAADGSGVICVMIVGGAVIPPLTGHLADVTGSLELALALPALCYAIIALF
GWYARKPVGA"
misc_feature 191121..192119
/locus_tag="PP1Y_Mpl1955"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cl11420"
/db_xref="CDD:212314"
misc_feature 191175..192116
/locus_tag="PP1Y_Mpl1955"
/note="glucose/galactose transporter; Region: gluP;
TIGR01272"
/db_xref="CDD:211636"
gene 192263..193003
/locus_tag="PP1Y_Mpl1952"
/db_xref="GeneID:10718039"
CDS 192263..193003
/locus_tag="PP1Y_Mpl1952"
/inference="protein motif:COG:COG3233"
/inference="similar to AA sequence:UniProt:A5V7A6"
/note="KEGG: swi:Swit_1811"
/codon_start=1
/transl_table=11
/product="polysaccharide deacetylase"
/protein_id="YP_004538127.1"
/db_xref="GI:334144918"
/db_xref="GeneID:10718039"
/translation="MSSTKRLLASIHDVGPRFEAEVEHLADLLESRLGKGHFAMLVVP
DHWGAAPLREDRAFQSRLRAWSERGIEMFVHGWFHRDTVQHSGAASFKARHLTAGEGE
FLGLDEATALRLMREGKALVEDVIGREVAGFIAPAWLYGEGSLSALRQSGFALAEDHW
KVWNASDQRVLARGPVITWASRSMARTASSLAFAVLARTVLPHTLDTVRIAVHPGDVT
KPSILSSIDSTLSRFARSHRPARYTELT"
misc_feature 192275..192943
/locus_tag="PP1Y_Mpl1952"
/note="Putative catalytic domain of uncharacterized
bacterial proteins from the carbohydrate esterase 4
superfamily; Region: CE4_u10; cd11374"
/db_xref="CDD:200603"
misc_feature order(192296..192301,192485..192487,192497..192499,
192668..192676,192899..192901)
/locus_tag="PP1Y_Mpl1952"
/note="putative active site [active]"
/db_xref="CDD:200603"
misc_feature order(192299..192301,192485..192487,192497..192499)
/locus_tag="PP1Y_Mpl1952"
/note="putative Zn binding site [ion binding]; other site"
/db_xref="CDD:200603"
gene 193184..194374
/locus_tag="PP1Y_Mpl1975"
/db_xref="GeneID:10718038"
CDS 193184..194374
/locus_tag="PP1Y_Mpl1975"
/inference="protein motif:COG:COG0438"
/inference="similar to AA sequence:UniProt:A5V7B0"
/note="KEGG: swi:Swit_1815"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_004538128.1"
/db_xref="GI:334144919"
/db_xref="GeneID:10718038"
/translation="MHGSLRIAVPIHSLKPGGVERVALGLASEWDRAGHRVTVVLGRS
GCANLCSAPALDYWKIPTRLPTASWETPWMVHSLYSFLVENRVDVLFCPGNTYAVVAA
AVKLLMGDYAPPMILKVSNALDRPDMPPLLRRGYDSWLRLQGTVFDRFVALSEPMQRE
IRERTLALPQQLATIANPLLPRTRLDALSRLKRRRATAWSTRYLTAGRLVPQKNFPLL
LRAFARAARPDDTLTIAGEGPELDALVRLATELGIAERVRFPGYLASIDPLLADADAF
LLSSDYEGLPGVIVEALAAGLPVLATDCCVSMSCLLDNGRTGVLVPTRCEESFAEGLV
EIRQFRTDPEKARQIASGYELEGAARRYIDLMSDLIRQKECDRKRKLEMSCLSPQNHG
PRLS"
misc_feature 193196..194302
/locus_tag="PP1Y_Mpl1975"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature 193199..194272
/locus_tag="PP1Y_Mpl1975"
/note="This family is most closely related to the GT1
family of glycosyltransferases. WabH in Klebsiella
pneumoniae has been shown to transfer a GlcNAc residue
from UDP-GlcNAc onto the acceptor GalUA residue in the
cellular outer core; Region: GT1_WabH_like; cd03811"
/db_xref="CDD:99982"
misc_feature order(193235..193237,193799..193807,193979..193981,
194045..194047)
/locus_tag="PP1Y_Mpl1975"
/note="putative ADP-binding pocket [chemical binding];
other site"
/db_xref="CDD:99982"
gene 194398..195324
/locus_tag="PP1Y_Mpl1986"
/db_xref="GeneID:10718040"
CDS 194398..195324
/locus_tag="PP1Y_Mpl1986"
/inference="similar to AA sequence:UniProt:A5V7A7"
/note="KEGG: swi:Swit_1812"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538129.1"
/db_xref="GI:334144920"
/db_xref="GeneID:10718040"
/translation="MSEPAAILANDTAAIELTPLDRKSNRGRNALFSVVLSLAVIATV
FHELSRLDIHHVLGMIPVSPGFWIVFAAAYFVTPASEWVIFRRLWTIPPAGILALLRK
KVYNELLLGYLGEAYFYTWARRRVSLDAAPFGAVKDVAILSAMAGNGVTVLLLVVMLP
MIGSTQLGLDAHMLTLSLGVILMISVAATIWRRRVFTLPRAELSMIMQVHLARIGLST
VLSALLWHIVLPDVPLSWWLYLATLRQLVSRLPLVPNKDLLFAGVAVVALGHERDIGA
LMALMAGLILAAHLVLGSLLAINDLANPEKPA"
gene 195342..195839
/locus_tag="PP1Y_Mpl1995"
/db_xref="GeneID:10718041"
CDS 195342..195839
/locus_tag="PP1Y_Mpl1995"
/inference="similar to AA sequence:UniProt:Q5NR82"
/note="KEGG: zmo:ZMO0148"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538130.1"
/db_xref="GI:334144921"
/db_xref="GeneID:10718041"
/translation="MPVLAAAAIPSTPDLGQAEGRCRPGERGPSFLVRVDGLKDRKGN
LKLEVYPDNNRDFLEDDNILINEGKTFRRVVAPVPATGTPVLCIRLPGPGTYAVSLLH
DRDENRRFGWRTDGIGFAGNPRLGWGKPKAAKASAQAGGGPTPITIVLNYQHGLGVAP
LDRSR"
misc_feature 195438..195785
/locus_tag="PP1Y_Mpl1995"
/note="Uncharacterized protein conserved in bacteria
(DUF2141); Region: DUF2141; cl01930"
/db_xref="CDD:194211"
gene 195856..197007
/locus_tag="PP1Y_Mpl2000"
/db_xref="GeneID:10718042"
CDS 195856..197007
/locus_tag="PP1Y_Mpl2000"
/inference="protein motif:COG:COG0438"
/inference="similar to AA sequence:UniProt:A5V7A9"
/note="KEGG: swi:Swit_1814"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_004538131.1"
/db_xref="GI:334144922"
/db_xref="GeneID:10718042"
/translation="MKIVDVCAFYSPMGGGVRTYVEQKLQIGPRLGHEIVIIAPGDED
AVIERGPGARIVTVKSPRFPLDRKYWYFPAADPLYAALDDEAPDFVEATSPWRSAGLV
AEWPGAAPRSLIMHADPLSAYAYRWFGQVFSRKTIDWQFSVFWEHLRKHSRKFDHVVS
ANSDLTRRLHEGGVANTTTIAMGVEPGCFSPDHRDPGLRARLLADCDLPESAVLLLGV
GRLAPEKRWPMVIDAVNAASQWAPIGLVMLGEGREERTILKHISGNPHIRLFQPERNR
KTFARLMASADALVHGCEAETFCMAAAEARASGTPVIVPDSGGAADHAASGAGRTYIS
GNAASCALAIRDIAMNRPRPALRARSMDEHFADLFSTYEATTAGTRSAA"
misc_feature 195856..196965
/locus_tag="PP1Y_Mpl2000"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature 195859..196950
/locus_tag="PP1Y_Mpl2000"
/note="This family is most closely related to the GT1
family of glycosyltransferases. Glycosyltransferases
catalyze the transfer of sugar moieties from activated
donor molecules to specific acceptor molecules, forming
glycosidic bonds. The acceptor molecule can...; Region:
GT1_like_2; cd03814"
/db_xref="CDD:99985"
gene complement(197015..197476)
/locus_tag="PP1Y_Mpl2014"
/db_xref="GeneID:10718043"
CDS complement(197015..197476)
/locus_tag="PP1Y_Mpl2014"
/inference="protein motif:COG:COG1522"
/inference="similar to AA sequence:UniProt:B6IV28"
/note="assigned by KAAS to KEGG Orthology:K05800 Lrp/AsnC
family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="Lrp/AsnC family transcriptional regulator"
/protein_id="YP_004538132.1"
/db_xref="GI:334144923"
/db_xref="GeneID:10718043"
/translation="MIELDAYEKKILRELQRDANQTTAEIAERVGLSASPCWRRIDRL
EREGVIKRRVALVDREKVGLNAHVFVQVKLTAHGRANLDEFASKIREFPEVLDCYVLM
GAVDFMIRVVAKDINAYERFFFEELSQLPGVQEVISTVALSQIKSTTELPI"
misc_feature complement(197018..197476)
/locus_tag="PP1Y_Mpl2014"
/note="Transcriptional regulators [Transcription]; Region:
Lrp; COG1522"
/db_xref="CDD:31711"
misc_feature complement(<197318..197449)
/locus_tag="PP1Y_Mpl2014"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature complement(order(197318..197323,197339..197344,
197348..197353,197360..197365,197369..197380,
197405..197413))
/locus_tag="PP1Y_Mpl2014"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature complement(order(197402..197404,197411..197413))
/locus_tag="PP1Y_Mpl2014"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
misc_feature complement(197045..197269)
/locus_tag="PP1Y_Mpl2014"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:189815"
gene 197604..198656
/locus_tag="PP1Y_Mpl2025"
/db_xref="GeneID:10718044"
CDS 197604..198656
/locus_tag="PP1Y_Mpl2025"
/EC_number="1.4.1.9"
/inference="protein motif:COG:COG0334"
/inference="similar to AA sequence:UniProt:Q1NHX5"
/note="assigned by KAAS to KEGG Orthology:K00263 leucine
dehydrogenase"
/codon_start=1
/transl_table=11
/product="leucine dehydrogenase"
/protein_id="YP_004538133.1"
/db_xref="GI:334144924"
/db_xref="GeneID:10718044"
/translation="MTAAASHELPPVEYIRLIDEAARLDGVIAIHSTARGPAAGGCRL
WTYRDAQTMLADAARLAEGMSYKNAMAELPFGGGKSVLRRPDGDFDRRALFEAFGREV
EKLGGRYVTAEDVGTGVEDMEFAALHTSHVAGRSARPGFAGGDPSPWTALGVFEGMKA
AALFAYGTSLSGMTIAVQGLGSVGAELCHMLSKTGAKLVVADIVVERAAALADKLGAK
VASVEEIAGVDAQVFAPCALGGALNDAALDVLKAKVICGAANNQLATPHIAGRLLAMD
VTYAPDYVVNAGGIINVSAEYLHEDENQVRARVMQIGPRTADVLEQAGELHLPTSQVA
NRIAEQLMAQPVQADS"
misc_feature 197637..198002
/locus_tag="PP1Y_Mpl2025"
/note="Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
Region: ELFV_dehydrog_N; pfam02812"
/db_xref="CDD:202408"
misc_feature 198033..198635
/locus_tag="PP1Y_Mpl2025"
/note="Glutamate/Leucine/Phenylalanine/Valine
dehydrogenase; Region: ELFV_dehydrog; pfam00208"
/db_xref="CDD:201083"
misc_feature 198039..198635
/locus_tag="PP1Y_Mpl2025"
/note="NAD(P) binding domain of leucine dehydrogenase,
phenylalanine dehydrogenase, and valine dehydrogenase;
Region: NAD_bind_Leu_Phe_Val_DH; cd01075"
/db_xref="CDD:133444"
misc_feature order(198138..198140,198144..198152,198207..198212,
198222..198224,198309..198314,198375..198377,
198381..198383)
/locus_tag="PP1Y_Mpl2025"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:133444"
misc_feature 198471..198473
/locus_tag="PP1Y_Mpl2025"
/note="Phe binding site; other site"
/db_xref="CDD:133444"
gene complement(198683..199246)
/locus_tag="PP1Y_Mpl2034"
/db_xref="GeneID:10718045"
CDS complement(198683..199246)
/locus_tag="PP1Y_Mpl2034"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538134.1"
/db_xref="GI:334144925"
/db_xref="GeneID:10718045"
/translation="MSTCPKRSGDSEMAEAQASPKAEALGKDLHLGLQLCRANTLSLT
RLQLALKSGDRRSTLEAIDRLHALDTQISQLVRRLPGHANDDPDMQALSRHVDEQNMA
IAFEKLALVSAVSGPNLGSRHPAWNGGRETAEDLPDLPELGQRMPDLPDHLIVADELP
YRKWLGILLGLLVFMAIAFAAVFALTG"
gene complement(199486..199752)
/locus_tag="PP1Y_Mpl2043"
/db_xref="GeneID:10718046"
CDS complement(199486..199752)
/locus_tag="PP1Y_Mpl2043"
/inference="similar to AA sequence:UniProt:A5PBY2"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538135.1"
/db_xref="GI:334144926"
/db_xref="GeneID:10718046"
/translation="MLPGRYLMLFIRPRVPQHGGETMATYTLRYSDDGRGLDKKIEFQ
AEDASGALIVAYSEAPHRNAELWEGARKLCTIRRDTGQVWRIGA"
gene complement(200196..201443)
/locus_tag="PP1Y_Mpl2055"
/db_xref="GeneID:10718048"
CDS complement(200196..201443)
/locus_tag="PP1Y_Mpl2055"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538136.1"
/db_xref="GI:334144927"
/db_xref="GeneID:10718048"
/translation="MQVEAQFEHDLCDFPANLSDTFRAEAGYLRALRRTEGGQKRESF
AIEQDHGIMERTALCPQFLAVGGVKLRRGVRQFGLLRAKLPGCRRVLWECRVERSGLQ
CAVVPVFADVESLAQCLPDPAEVRHEFGIDGIGLLLAAQPLIFQFLDAAAPAQGGFQD
GVRFGFRPGQLRAEFGLNAFCLQQPRLFIGDETLLLARGIESRSGCIAELRLGDVEQG
IRAGYLVRRARTDARCSFKLGQRRGLQLQYFRLGRGNLLAQPRNPRIDRSVGSRFGAG
RGHLARQRIEPPAVDPSVAVTEQSKFEDGRWRGLTRQEILKALHFALQACQFLRCRLT
GLLLGAVAVEGLAVRFELAFTLRLRLAQEGGLCQRKLRLIVREVGEARRVGLGLRVEG
AVRHQPGNCAGAGCIAAGEREGE"
gene 200484..203333
/locus_tag="PP1Y_Mpl2050"
/db_xref="GeneID:10718050"
CDS 200484..203333
/locus_tag="PP1Y_Mpl2050"
/inference="similar to AA sequence:UniProt:A6G177"
/note="KEGG: vha:VIBHAR_02268"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538137.1"
/db_xref="GI:334144928"
/db_xref="GeneID:10718050"
/translation="MQGLQDFLAGKPAPSAVLELGLLSNSNGGIDSRRLDTLTGKVPS
PGPEPAADAPVDARIAWLRKQVAAAKSEVLQLQPATLAQLEAASGVSSGTADEIASAD
ALLDVAKSQLSDAARAALNAASEQERLIANEQARLLQTKSVQAEFRAQLARSKAEPDA
ILESALSWRRRIQELEDEGLGREQQADAIYAELVTDLSRIRKALSKALDISENGYDRA
LKPGSLDPALPQDSPATRQLRTQKTELAHAAAQLHASYGEELWAKRRALHDAMVLLNG
ERLALLPSLSPAKRAQVTGFGTEGVAQVRREIAEIVLELRFNLQSWRNTMELVAQPFQ
RPTPGFVLALLRLLAIVLVFSWWRRNGDPMLRRAQAEAQAKRPRTLASSLQAGFFEYW
RRVRKPLDWLALTILVWWLLPEGLLIPGLSFIWIVLFWSLTTVLVVNLVDQLARGRGR
DDPRATLRWNSLRLIAGSLLAVGLLLNLTSASVGKGAMYNWVFTLSLLLVPAILVLLA
NWWRARIVALAQAEARDSSLLNWVSRDPGGLTGLLGRLAAGALLLLRGLRSIIARRMR
DLALVRELFEQRARVQAARQVAQDKASGRFHRPSPEVLECLDPHRLPIEFRTGTDRPG
GIALPELMPGTVTLVVGERGLGKSSFLRDISEQYADCGKVVRLSVGSPDLGALLHDLH
AALGTGLISSDPDELSDWLAREDAPCLITVDDLQRLVMPAIGGLAAIDTLIAMARSSG
ISCRWAFTIGEDAWSFLQRARVDRVLFDAVIRLPHWSSADLRALIERRTAQVGLQPDF
SAMIDDGVFELGEDLTVEERKKRGYFDRLAEYVNGNPAIALDYWRQSLFVDGLDQKVV
VRTFDAPAVDRLAALPLPTLFVLRAIMRMDMADVPSIRASTDLSTSIVTDALRSLQLL
GVIAPVAEFYQITLHWWMEATRLLLRQNLTVRGIK"
gene 203336..204262
/locus_tag="PP1Y_Mpl2082"
/db_xref="GeneID:10718049"
CDS 203336..204262
/locus_tag="PP1Y_Mpl2082"
/inference="protein motif:COG:COG0668"
/inference="similar to AA sequence:UniProt:B7VNT3"
/note="KEGG: vfm:VFMJ11_1782"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="YP_004538138.1"
/db_xref="GI:334144929"
/db_xref="GeneID:10718049"
/translation="MSRHLGRLLCLFGGMVAPVSAAHAQAEFDADTISKLADIVRWSG
AITSLFVIGGAWALLRLLSRFVSAFSSEFTSRRLTLQKINTLGQFVVYVATTVLVLLL
SFRFDETTLAVIGGTIAVAVGFAMKDLVASFIAGVIVMLDRPFQVGDRVSFGGEYGDI
TAIGLRSVRMQTLDDNTITIPNSKFLSEITSSGNYGALDMQVVMDFYIAPGQDIDRAY
EIVNEAALSSRFVFLAKPVTVLVTQWVSDYLVGVRLRLKAYVLDTRFEKAFESDVNLR
VLRAFEAEGILVPGAVPFPRNAQNPAIKSEII"
misc_feature 203390..204202
/locus_tag="PP1Y_Mpl2082"
/note="Small-conductance mechanosensitive channel [Cell
envelope biogenesis, outer membrane]; Region: MscS;
COG0668"
/db_xref="CDD:31012"
misc_feature 203651..204193
/locus_tag="PP1Y_Mpl2082"
/note="Mechanosensitive ion channel; Region: MS_channel;
pfam00924"
/db_xref="CDD:201506"
gene 204572..204841
/locus_tag="PP1Y_Mpl2094"
/db_xref="GeneID:10718051"
CDS 204572..204841
/locus_tag="PP1Y_Mpl2094"
/inference="similar to AA sequence:UniProt:Q1GRH8"
/note="KEGG: sal:Sala_2033"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538139.1"
/db_xref="GI:334144930"
/db_xref="GeneID:10718051"
/translation="MKKFIYLAGPAALLALAACQSEKADNVEDAAENRADQLDEMADN
ATSEAQEEALENKADRVEEQGEEAANKIDDNGEIAPSETHMGDTQ"
gene complement(205016..207502)
/locus_tag="PP1Y_Mpl2100"
/db_xref="GeneID:10718053"
CDS complement(205016..207502)
/locus_tag="PP1Y_Mpl2100"
/inference="similar to AA sequence:UniProt:C1F346"
/note="KEGG: aca:ACP_2738"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538140.1"
/db_xref="GI:334144931"
/db_xref="GeneID:10718053"
/translation="MKRIASALLATATIMAGPVATQGQTLRVTPAQTLEAQGITVIVD
QNEFSPIFFDEKNAGIQIVLHGERIATDGAVRLDATPEQWAAVPAFLGRTLGASPNQV
LVRSEYKDVNLGYSVKVTAEGDGFRIAVDLDKPLPPSLAGKAGFNLDFLPTAYFGKTF
MMGQDPGLFPRHPTGPMAKDGSGDPLPLAEGANAITLSPEDPMTRVSITSDTAPLKLY
DARNRAQNGWFVVRSLIPAGAKENAIVWHVRPNVVKDWVRQPVVSFNQAGYTPGRPKV
ALIELDPNFKAPAEAELVKLSPDGSKVPVLRAKTQSRGRWMRYNYAAFDFSSVREPGV
YAISYAGQTTNPFRISADAYDRIWQTSLDTFLAEQMDHMGIREQYRVWSSPSHLDDAR
QAPPNIVHFDGYKMGPELDSPFKAGEHIPGLAVGGWQDAGDYDIQTPQNASVVRDLVW
ARELFGLDWDETSVDEKARAVEIRKPDGIEDSIQQIRHGTLQLLAQYKVFGHAIVGII
DPTLRQYAHLGDAGSQTDGLVYDASLDPTERKGAASGAQDDRWAFTTDLPANNLIVAA
ALAGSSRALADSDPAMAGEALAAAKALWAKQQTGDIKPGDGRDDSSSPRSAQAANVAA
TVELLITTRGEKVYADRLRQLLPVIQQNFEWLGDAAVRAIPFMDAGYRKHLVPSVRKM
KAKVDADLVDNPFGVPISEGSWAGSNQVVSFGTTMYLLHQHFPDIVGTDYTLSAIDYV
LGRHPANNLSLVSTVGTASKLIGYGHNRADYSFIPGGLVPGVLIVKPDFPEAKTDWPF
LWFENEYTVSTTSAYILAARAAMAAAAEAR"
misc_feature complement(206456..206722)
/locus_tag="PP1Y_Mpl2100"
/note="N-terminal Early set domain associated with the
catalytic domain of cellulase; Region: E_set_Cellulase_N;
cd02850"
/db_xref="CDD:199881"
gene complement(207612..208568)
/locus_tag="PP1Y_Mpl2129"
/db_xref="GeneID:10718054"
CDS complement(207612..208568)
/locus_tag="PP1Y_Mpl2129"
/inference="protein motif:COG:COG0657"
/inference="similar to AA sequence:UniProt:B0SVR1"
/note="KEGG: cak:Caul_2402"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538141.1"
/db_xref="GI:334144932"
/db_xref="GeneID:10718054"
/translation="MRLTSNLPLTRPILSSLVACGIAASFTITEPALAQSDKMVSIAT
PAQGDAIRLDTGKLPGATIAESWHSQYNSVFARNVTEATLTPFLPDPAKANGTAVIVA
PGGGFRTLSMENEGWDVARALAAKGVAAFVLKYRLNQTPPSLADFERSSADMSAPRGP
APRPALEGMMANLGPQIADARAAFALVRKRSKEWHVDPDRIGMVGFSAGAMLTMATTL
AGQDAKPAFIGNIYGPLAPATVPADAPPMFVALAADDPLFGNSGFGLIESWRAAKRPV
EFHLFEQGGHGFGMYQKPTTSTGWFDEFTSWMGMHGLLKPTH"
misc_feature complement(207705..>208034)
/locus_tag="PP1Y_Mpl2129"
/note="alpha/beta hydrolase fold; Region: Abhydrolase_3;
pfam07859"
/db_xref="CDD:203783"
gene complement(208870..209196)
/locus_tag="PP1Y_Mpl2143"
/db_xref="GeneID:10718055"
CDS complement(208870..209196)
/locus_tag="PP1Y_Mpl2143"
/inference="protein motif:COG:COG1734"
/inference="similar to AA sequence:UniProt:Q2GBE3"
/note="KEGG: nar:Saro_0382"
/codon_start=1
/transl_table=11
/product="TraR/DksA family transcriptional regulator"
/protein_id="YP_004538142.1"
/db_xref="GI:334144933"
/db_xref="GeneID:10718055"
/translation="MADIDTAKKKLEARLAELNARLAHLQDDLAEPLDPDFAEAAVER
EDDASLEGQAALVSSELGSVNRALDRIANGTYGLCVKCSGQISPERLSARPEAALCIT
CAKEVS"
misc_feature complement(208876..>209100)
/locus_tag="PP1Y_Mpl2143"
/note="DnaK suppressor protein [Signal transduction
mechanisms]; Region: DksA; COG1734"
/db_xref="CDD:31920"
gene complement(209397..210737)
/locus_tag="PP1Y_Mpl2149"
/db_xref="GeneID:10718056"
CDS complement(209397..210737)
/locus_tag="PP1Y_Mpl2149"
/inference="protein motif:COG:COG4638"
/inference="similar to AA sequence:UniProt:A3VMQ3"
/note="KEGG: nar:Saro_3484"
/codon_start=1
/transl_table=11
/product="Rieske (2Fe-2S) domain-containing protein"
/protein_id="YP_004538143.1"
/db_xref="GI:334144934"
/db_xref="GeneID:10718056"
/translation="MVTTYRELLDADSRSAPEVLRADQRGDFGHAPICAKRYIDQAFF
DCEVQMMWSRVWQMACREEDIPEVGDVHVYDIIERSVLVVRSAPDRIEAFPNSCLHRG
RKLMDESGRVETMRCGFHGWSWKLDGSIRSVPCRQEFAGLSDADLHLPQIRVGRWGGF
VFINFDRDGPSLEDYLGVVPRHFERWRLEDRWKAVHVARVIPCNWKVAQEAFMESYHV
IATHPQILPFFSDVGSQYDVYGPHVNRNLAAFGEPSPHLPERPGNDEVIGGMLGLWGR
KMPENLAAEAVPAREFLGEAARSSIVRATGGDLEKATDAEMLDAIVYNVFPNFAPWGG
FAPNIVYRWRPNGRAVDSCIMEVMILKPVKEGEARPRGVPVHWLGEDEPWSNATELPA
LGPVIDQDMANMPQVQTGLKASLAGTVQLAGYMESRIRHFHETLDAYLEGRLPA"
misc_feature complement(<210012..210626)
/locus_tag="PP1Y_Mpl2149"
/note="Phenylpropionate dioxygenase and related
ring-hydroxylating dioxygenases, large terminal subunit
[Inorganic ion transport and metabolism / General function
prediction only]; Region: HcaE; COG4638"
/db_xref="CDD:34257"
misc_feature complement(210222..210572)
/locus_tag="PP1Y_Mpl2149"
/note="Rieske non-heme iron oxygenase (RO) family,
N-terminal Rieske domain of the oxygenase alpha subunit;
The RO family comprise a large class of aromatic
ring-hydroxylating dioxygenases found predominantly in
microorganisms. These enzymes enable...; Region:
Rieske_RO_Alpha_N; cd03469"
/db_xref="CDD:58539"
misc_feature complement(order(210372..210374,210378..210380,
210387..210389,210435..210440,210444..210446))
/locus_tag="PP1Y_Mpl2149"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:58539"
misc_feature complement(209415..210158)
/locus_tag="PP1Y_Mpl2149"
/note="C-terminal catalytic domain of Pseudomonas
fluorescens MupW and related aromatic ring hydroxylating
dioxygenases; Region: RHO_alpha_C_MupW-like; cd08882"
/db_xref="CDD:176891"
misc_feature complement(order(209433..209435,209445..209447,
209454..209456,209466..209477,209508..209522,
209526..209534,209688..209693,210075..210077,
210081..210083,210087..210092,210096..210098,
210105..210110,210117..210119,210129..210134))
/locus_tag="PP1Y_Mpl2149"
/note="putative alpha subunit interface [polypeptide
binding]; other site"
/db_xref="CDD:176891"
misc_feature complement(order(209538..209540,209547..209552,
209568..209573,209580..209582,209715..209717,
209721..209723,209742..209744,209748..209750,
209772..209774,209778..209783,210072..210074,
210084..210089,210093..210098,210102..210107))
/locus_tag="PP1Y_Mpl2149"
/note="putative active site [active]"
/db_xref="CDD:176891"
misc_feature complement(order(209547..209552,209568..209573,
209580..209582,209715..209717,209721..209723,
209742..209744,209748..209750,209772..209774,
209778..209783,210072..210074,210084..210089,
210093..210098,210102..210107))
/locus_tag="PP1Y_Mpl2149"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:176891"
misc_feature complement(order(209538..209540,210072..210074,
210087..210089))
/locus_tag="PP1Y_Mpl2149"
/note="Fe binding site [ion binding]; other site"
/db_xref="CDD:176891"
gene complement(210749..211933)
/locus_tag="PP1Y_Mpl2166"
/db_xref="GeneID:10718057"
CDS complement(210749..211933)
/locus_tag="PP1Y_Mpl2166"
/inference="protein motif:COG:COG4638"
/inference="similar to AA sequence:UniProt:A5V8J6"
/note="KEGG: swi:Swit_2253"
/codon_start=1
/transl_table=11
/product="Rieske (2Fe-2S) domain-containing protein"
/protein_id="YP_004538144.1"
/db_xref="GI:334144935"
/db_xref="GeneID:10718057"
/translation="MALYEGMAGEKARKGPPDGFPRLPLIPAARYTDPAFLALERKFL
WQNVWLYALHVDELPEPGDYRLWDRTGSPIVIVRGKDGAIRAFYNSCSHRGAPLVEKV
QGATQGFFCRYHGWTYDLAGNLNSVRELRDFPQFDRSCHGLRKVRCETWGNWVFVNEN
PDAEPLDRFLGGIVDDWANLGVEHLRHIQSDSFVIDCQVKVLIDAFLETYHLKSIHPN
TVDRFLDSRSSFMNLWERGHSMMTTAHRDPEWRDPGARGMPQIEGAEDIFEQNPSYNI
FPNLVTPPSRTGMPFLTFWPRDDRSMVVDVHWFGPEGSQGHEMWPTRISNLGRILEED
TQFAPSIQKSVEAKGFEGLNLSYQERRIYAWHMELDRLIGDALPEQLRLEPVLAPWIE
SH"
misc_feature complement(210821..211870)
/locus_tag="PP1Y_Mpl2166"
/note="Phenylpropionate dioxygenase and related
ring-hydroxylating dioxygenases, large terminal subunit
[Inorganic ion transport and metabolism / General function
prediction only]; Region: HcaE; COG4638"
/db_xref="CDD:34257"
misc_feature complement(211436..211789)
/locus_tag="PP1Y_Mpl2166"
/note="Rieske non-heme iron oxygenase (RO) family,
N-terminal Rieske domain of the oxygenase alpha subunit;
The RO family comprise a large class of aromatic
ring-hydroxylating dioxygenases found predominantly in
microorganisms. These enzymes enable...; Region:
Rieske_RO_Alpha_N; cd03469"
/db_xref="CDD:58539"
misc_feature complement(order(211586..211588,211592..211594,
211601..211603,211652..211657,211661..211663))
/locus_tag="PP1Y_Mpl2166"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:58539"
misc_feature complement(210812..211360)
/locus_tag="PP1Y_Mpl2166"
/note="C-terminal catalytic domain of the oxygenase alpha
subunit of Rieske-type non-heme iron aromatic
ring-hydroxylating oxygenases; Region: RHO_alpha_C;
cd00680"
/db_xref="CDD:176852"
misc_feature complement(order(210827..210829,210839..210841,
210848..210850,210860..210871,210902..210916,
210920..210928,211031..211036,211289..211291,
211301..211306,211310..211312,211319..211324,
211331..211333,211343..211348))
/locus_tag="PP1Y_Mpl2166"
/note="alpha subunit interface [polypeptide binding];
other site"
/db_xref="CDD:176852"
misc_feature complement(order(210932..210934,210941..210946,
210971..210973,211058..211060,211064..211066,
211085..211087,211091..211093,211115..211117,
211121..211126,211286..211288,211298..211303,
211307..211312,211316..211321))
/locus_tag="PP1Y_Mpl2166"
/note="active site"
/db_xref="CDD:176852"
misc_feature complement(order(210941..210946,210971..210973,
211058..211060,211064..211066,211085..211087,
211091..211093,211115..211117,211121..211126,
211286..211288,211298..211303,211307..211312,
211316..211321))
/locus_tag="PP1Y_Mpl2166"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176852"
misc_feature complement(order(210932..210934,211286..211288,
211301..211303))
/locus_tag="PP1Y_Mpl2166"
/note="Fe binding site [ion binding]; other site"
/db_xref="CDD:176852"
gene 212162..212545
/locus_tag="PP1Y_Mpl2180"
/db_xref="GeneID:10718058"
CDS 212162..212545
/locus_tag="PP1Y_Mpl2180"
/EC_number="3.1.26.4"
/inference="protein motif:COG:COG0328"
/inference="similar to AA sequence:UniProt:A5V7L7"
/note="assigned by KAAS to KEGG Orthology:K03469
ribonuclease HI"
/codon_start=1
/transl_table=11
/product="ribonuclease HI"
/protein_id="YP_004538145.1"
/db_xref="GI:334144936"
/db_xref="GeneID:10718058"
/translation="MARRRVKVFFDGGSRPNPGRMEAAVVVRGKTHLFEDMGHGSNGD
AEWLALVQALEVSRAMDLTDVELIGDAREVVQKANLAMRGEIAPHRHVSIFLALAHEV
RPGRIRWIKREQNLAGIALARRHPR"
misc_feature 212177..212524
/locus_tag="PP1Y_Mpl2180"
/note="RNase H is an endonuclease that cleaves the RNA
strand of an RNA/DNA hybrid in a sequence non-specific
manner; Region: RNase_H; cl14782"
/db_xref="CDD:209893"
misc_feature order(212192..212203,212285..212290,212297..212299,
212369..212371,212486..212488,212513..212515)
/locus_tag="PP1Y_Mpl2180"
/note="RNA/DNA hybrid binding site [nucleotide binding];
other site"
/db_xref="CDD:187690"
misc_feature order(212192..212194,212369..212371)
/locus_tag="PP1Y_Mpl2180"
/note="active site"
/db_xref="CDD:187690"
gene 212797..215172
/locus_tag="PP1Y_Mpl2191"
/db_xref="GeneID:10718059"
CDS 212797..215172
/locus_tag="PP1Y_Mpl2191"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:Q15QC2"
/note="KEGG: ttu:TERTU_0091"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538146.1"
/db_xref="GI:334144937"
/db_xref="GeneID:10718059"
/translation="MSILGASLAVIAAASPAQADEAAEAENVDAEAIVVTGTRTTYNN
SMLTEQMIAEQPPLASVLDLVDTLPGVQVQEGDAFGFDDWSTTVSIRGFQTNLDQQQV
GITIDGLPNGGSNYGGGAKANRFIDTMNIATVEVSQGTADIGSLSNEALGGTLNFVTS
DPLDEMRVRLSGSVGDFEASRYYGRVDTGLFLNGAAKAWFSYSHQEATDWIGGSAQNH
RDNFAGKFIIDAPVRITGYASYDDAHEDNYDQLFFPDQYVDIPSTDGLTTNWTGVPYQ
DQAYRRAWSTLRKNFLGYLKAETTIADSLDLRVSAYYHDMAGRGDWVPQYVVDVTADG
AGNPESELSGIGTVNGGSPLGTIYFVDANGVSLTPTSGCTGSLTYPYGGTTDASYDPA
CYPAGAIGAQSYRHTHYRKDRLGFTGDAAWKWQLGTLENTLRGGLWYEDTHRQEWRDW
HNVIDTQVGPAYEATPYWTQYSRKYPQDTFKWYAQDTVQFGPVTANFGAKQFINHIDR
VDLFGDTPDTRFKSKSDVLLSGGVQIEPMTGLDLFAGYAENFKALTDAVLEFGDADLS
QLKPETSENWEAGLRYQGSWFRGSATWFKAKFSNQVLFVSNSSSAGNDYLGEGDGKFF
NAGGIDSEGFELLANVTPFEGLNLYGAYTYIDAKYRSISDLDTGTTEDDATIAMLNGL
AGNRVAGIPRHMWVLSGSYTYGPVTAGLTGKYTGDRFADSGNSLVAQNYFLTDLNISV
KGEGLSDILKDLEFALTVNNLTDERYLGGISGGYAWIGAPRTAIFTVTADF"
misc_feature 212893..215169
/locus_tag="PP1Y_Mpl2191"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature 212929..215169
/locus_tag="PP1Y_Mpl2191"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(212929..212952,212983..213012,213058..213075,
213106..213129,213178..213210,213247..213273)
/locus_tag="PP1Y_Mpl2191"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(213946..213948,214027..214029)
/locus_tag="PP1Y_Mpl2191"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 215186..216925
/locus_tag="PP1Y_Mpl2207"
/db_xref="GeneID:10718060"
CDS 215186..216925
/locus_tag="PP1Y_Mpl2207"
/EC_number="3.1.3.1"
/inference="protein motif:COG:COG3540"
/inference="similar to AA sequence:UniProt:A4A6Z3"
/note="assigned by KAAS to KEGG Orthology:K01077 alkaline
phosphatase"
/codon_start=1
/transl_table=11
/product="alkaline phosphatase"
/protein_id="YP_004538147.1"
/db_xref="GI:334144938"
/db_xref="GeneID:10718060"
/translation="MKRQISQACVSRRALLAGIAGTAALLGQPALLRAHEVSSNPTFR
HGVASGDPDATGVVLWTRVTAAGPVEVTWELSDTPDFAKLVGTGVFRTDASRDHTVKV
LADGLAPGSIHYYRFRLGDALSPVGRARTLPQGRLERLGIALASCSNYAFGFFNAYDA
IARDSNVDFVLHTGDYIYEYGGKDGWGADVAQAIGRVQAPLHEIVSLADYRMRHAQYK
TDAGSQAMHANHTLLACWDDHESANNNWTGGAQNHQPDTEGDWNTRRAASIQAYFEWM
PVREPKWLSAPGRKRMQFWRRYDFGDLALLHTLETRHTARAKQIEYIDHAKDIVDQAS
AERFRKDVLGAPDRPILSPLLEQDLEAALSDSVREGRPWRIIGCPMVIGRVEVPDVAA
LGIVPDPAPRLALAKTAEDFARLAADPAVALAWKGKYNLPDYTDAWGGYPWARERLYG
LSRRAGAGDLVFLSGDSHSFWVNRLADEDGRPAGIEFGTAGISSPGDFVSSGFDDTTA
QLLDRAYAEHIPEVTWTDNMHQGYVRVEFGRENGLATFVAVDTVLTPDYRTKVLRQVP
FTRQGDVVDIVEA"
misc_feature 215318..216805
/locus_tag="PP1Y_Mpl2207"
/note="PhoD-like phosphatase; Region: PhoD; pfam09423"
/db_xref="CDD:204240"
misc_feature 215609..>216121
/locus_tag="PP1Y_Mpl2207"
/note="Bacillus subtilis PhoD and related proteins,
metallophosphatase domain; Region: MPP_PhoD; cd07389"
/db_xref="CDD:163632"
misc_feature order(215624..215626,215630..215632,215708..215710,
215897..215902,216119..216121)
/locus_tag="PP1Y_Mpl2207"
/note="putative active site [active]"
/db_xref="CDD:163632"
misc_feature order(215624..215626,215630..215632,215708..215710,
215897..215899,216119..216121)
/locus_tag="PP1Y_Mpl2207"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:163632"
misc_feature <216491..216661
/locus_tag="PP1Y_Mpl2207"
/note="Bacillus subtilis PhoD and related proteins,
metallophosphatase domain; Region: MPP_PhoD; cd07389"
/db_xref="CDD:163632"
gene complement(217092..218018)
/locus_tag="PP1Y_Mpl2226"
/db_xref="GeneID:10718061"
CDS complement(217092..218018)
/locus_tag="PP1Y_Mpl2226"
/inference="protein motif:COG:COG0491"
/inference="similar to AA sequence:UniProt:Q2GAR2"
/note="KEGG: nar:Saro_0614"
/codon_start=1
/transl_table=11
/product="beta-lactamase-like protein"
/protein_id="YP_004538148.1"
/db_xref="GI:334144939"
/db_xref="GeneID:10718061"
/translation="MARATAVRRSHALAFASALAAAWSWSAQAAAPAPQLFKERWIAG
NLAQEPVVQVQALDDDTFVIRQSIKTNFEAPFLYLMFGRDKALMIDTGAQGGQIRPVV
DRLVAEWLLAKHRSSIPLVVAHSHSHGDHIAGDGAFRDRPETVVVGLQAGNVAEFFGV
ANWPDGIATFDLGGRPLKIIPTPGHQKAAIAVYDSRLQILLSGDTIYPGRLYVPVNFL
AEERASVDRLAAFAASHPIRALLGAHIEMTVQPGRDYAHEVLSHAAEHVLELPVGTIG
ELQEGLKADLDVPDRPQVHDNFIIYPVPARTE"
misc_feature complement(<217392..217787)
/locus_tag="PP1Y_Mpl2226"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; smart00849"
/db_xref="CDD:197917"
misc_feature complement(217224..217775)
/locus_tag="PP1Y_Mpl2226"
/note="Zn-dependent hydrolases, including glyoxylases
[General function prediction only]; Region: GloB; COG0491"
/db_xref="CDD:30837"
gene complement(218161..220554)
/locus_tag="PP1Y_Mpl2237"
/db_xref="GeneID:10718063"
CDS complement(218161..220554)
/locus_tag="PP1Y_Mpl2237"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:Q2GAR3"
/note="KEGG: nar:Saro_0613"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538149.1"
/db_xref="GI:334144940"
/db_xref="GeneID:10718063"
/translation="MKLFRNTLLGATFLMGVGTTSAYAQDAAAGGETGGDIVVTATRR
ATSLQDVPINISAVGEEQLSRQRIDDVRDLADFTPGMTISDTGPGSTGSIVLRGLNAS
DVDSTGASYDDALGMYLGEVPLYYDFKLLDIARVETLLGPQGTLYGLGTLAGAIRNIP
NRPNTDTIEGEVHGRFYGKQHSGKLGYQVDGVINIPIVTDHVAFRSATGYFYDPGFID
YPLLLQEPGVSLPQPSGPDGVTDADYAANLMSRKDLNFEKTFTTRNQLLVQFSEDLKV
NFTYAYQQTKTDGGQYNSDGVLGTGKYESAGRYIEPVNRHAHLGSMEINANLADIADL
VATTAYTNVRNRTQADNTDLLLDLDYGYETFPAFSSWNEADDHRKQFNQEVRFVSRHG
GPFSWVLGGFYNEQKRQRDYIEHVPNHPWVEFGTQPNPDEVEYASFVKSKVTEKAVFG
EGTFRVTPAWQVTAGARYFGYTSNISGLSVLPLLGDPVSPYDLEPAGGKTKKSGWVWK
FNSSYNFTPDLMVYATYSKGYRIGGPNTVAPCILPLDPTQQNVCALPNEIQYGPDTTK
NAEIGVRAQFFDRKLNFNFNVFQIKWSGIQVDSATLNGIVGITVNGGKAKSQGFETSF
QVLPLPGLSIQGTYSYVDAKLTEDVPGIITINDPAGTYPSNPIQLDALDGDRLPGSAK
HSGSLGATYTMPVMAGNLVADWTATYRGNVVTRLGWDRAYGDRLPSYVLHRASLTYEA
DRYSIGLFANNIFDKYAVASVSNDRSRVGLNDGVLLRYYKQTVINPRTFGIELRYKY"
misc_feature complement(218164..220497)
/locus_tag="PP1Y_Mpl2237"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature complement(218164..220395)
/locus_tag="PP1Y_Mpl2237"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(220072..220083,220087..220101,
220135..220152,220153..220158,220204..220224,
220237..220239,220258..220275,220309..220338,
220366..220395))
/locus_tag="PP1Y_Mpl2237"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(219439..219441,219520..219522))
/locus_tag="PP1Y_Mpl2237"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 221198..221314
/locus_tag="PP1Y_Mpl2263"
/db_xref="GeneID:10718064"
CDS 221198..221314
/locus_tag="PP1Y_Mpl2263"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538150.1"
/db_xref="GI:334144941"
/db_xref="GeneID:10718064"
/translation="MLDQTRGESGLAIESTLAELLPKFLSVIFFNGQARASH"
gene 221342..222424
/locus_tag="PP1Y_Mpl2268"
/db_xref="GeneID:10718065"
CDS 221342..222424
/locus_tag="PP1Y_Mpl2268"
/inference="protein motif:COG:COG0715"
/inference="similar to AA sequence:UniProt:A1WZK7"
/note="assigned by KAAS to KEGG Orthology:K02051
sulfonate/nitrate/taurine transport system
substrate-binding protein"
/codon_start=1
/transl_table=11
/product="sulfonate/nitrate/taurine transport system
substrate-binding protein"
/protein_id="YP_004538151.1"
/db_xref="GI:334144942"
/db_xref="GeneID:10718065"
/translation="MVMSFVRSSRIALLAGTLLAVSCSPGADTTPQARTEFNIGWSIY
AGWMPWPYAQQAGIVKKWADKYGIKINVVQVNDYVESVNQYTAGKFDGVTVTNMDALT
IPAAGGKDTSAIIVGDYSNGNDGVLLKGADQLSSIKGRQVYLVELSVSHYLLARALEK
GGLKPTDVKTVNTSDADIVGAFSSPDATAAVAWNPQLSVMKEQPGVKQVFSSAQIPGE
ILDLLVVDTDTLKANPKLGKALTGIWYETMALIKRQDAEGKAARAAMAKLAGTTPEVF
EGQLATTYLYSDPKAAAAATSSPALVQTMTQVRDFSFSHGLFKGASSADEVGMSFPGG
KTLGDPGRVTLRFDESFMKMAADGRL"
misc_feature 221360..>222103
/locus_tag="PP1Y_Mpl2268"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
systems, periplasmic components [Inorganic ion transport
and metabolism]; Region: TauA; COG0715"
/db_xref="CDD:31059"
misc_feature 221441..222421
/locus_tag="PP1Y_Mpl2268"
/note="NMT1-like family; Region: NMT1_2; cl15260"
/db_xref="CDD:212369"
gene 222464..223279
/locus_tag="PP1Y_Mpl2275"
/db_xref="GeneID:10718066"
CDS 222464..223279
/locus_tag="PP1Y_Mpl2275"
/inference="protein motif:COG:COG0600"
/inference="similar to AA sequence:UniProt:Q0BRA5"
/note="assigned by KAAS to KEGG Orthology:K02050
sulfonate/nitrate/taurine transport system permease
protein"
/codon_start=1
/transl_table=11
/product="sulfonate/nitrate/taurine transport system
permease"
/protein_id="YP_004538152.1"
/db_xref="GI:334144943"
/db_xref="GeneID:10718066"
/translation="MRWVNRNVRRGEGILLGALPILFLILLYIFLAAERHAANPMDKV
LPLPNGMARALSVLLFQPDQLTGKLLFWADTLASLQRLGIGLGIATVVALVLGLVLGV
LPPVRTTLGPLVTGIAVIPPIALLPILFIALGLGETAKIALIVIGIAPVMVRDITAHV
AALPREQIIKAQTLGASSWQIMIRVALPQAMPRLLHAVRLSLGPAWVFLISAEAIASD
VGLGYRIFLVRRYLSMDVIIPYVAWIALLAIAMDAALVFASRKLYPWAHGASH"
misc_feature 222593..223270
/locus_tag="PP1Y_Mpl2275"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
system, permease component [Inorganic ion transport and
metabolism]; Region: TauC; COG0600"
/db_xref="CDD:30945"
misc_feature <222884..223177
/locus_tag="PP1Y_Mpl2275"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(222884..222886,223100..223102,223130..223132,
223139..223141,223169..223171)
/locus_tag="PP1Y_Mpl2275"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(222959..222997,223013..223018,223028..223030)
/locus_tag="PP1Y_Mpl2275"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 223276..224076
/locus_tag="PP1Y_Mpl2282"
/db_xref="GeneID:10718067"
CDS 223276..224076
/locus_tag="PP1Y_Mpl2282"
/inference="protein motif:COG:COG1116"
/inference="similar to AA sequence:UniProt:A4VL30"
/note="assigned by KAAS to KEGG Orthology:K02049
sulfonate/nitrate/taurine transport system ATP-binding
protein"
/codon_start=1
/transl_table=11
/product="sulfonate/nitrate/taurine transport system
ATP-binding protein"
/protein_id="YP_004538153.1"
/db_xref="GI:334144944"
/db_xref="GeneID:10718067"
/translation="MSALLSLRDVWVEYGDKIVLEKVDLEFEAGSFVSIIGPSGAGKS
SLLRVILGQEVPTRGTILLDGTPLAPECGPDRGVVFQRYSVFPHLSALQNTVFGIECA
KAPLSARLFGGARRAAESEAADMLNAVGLGDAIDLYPAQMSGGMQQRLAIAQALIKRP
RILLLDEPFGALDPGIRADMHGLITRLWQDYALTIIMVTHDIREAFTLGTRVLALDKR
RHDPHAPHRFGATAVYDLPLRKSDEEPEDGAVVSLEGPLGAKERIGHG"
misc_feature 223282..224013
/locus_tag="PP1Y_Mpl2282"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
system, ATPase component [Inorganic ion transport and
metabolism]; Region: TauB; COG1116"
/db_xref="CDD:31313"
misc_feature 223288..223932
/locus_tag="PP1Y_Mpl2282"
/note="NrtD and SsuB are the ATP-binding subunits of the
bacterial ABC-type nitrate and sulfonate transport
systems, respectively. ABC transporters are a large
family of proteins involved in the transport of a wide
variety of different compounds, like sugars; Region:
ABC_NrtD_SsuB_transporters; cd03293"
/db_xref="CDD:73052"
misc_feature 223384..223407
/locus_tag="PP1Y_Mpl2282"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73052"
misc_feature order(223393..223398,223402..223410,223516..223518,
223771..223776,223873..223875)
/locus_tag="PP1Y_Mpl2282"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73052"
misc_feature 223507..223518
/locus_tag="PP1Y_Mpl2282"
/note="Q-loop/lid; other site"
/db_xref="CDD:73052"
misc_feature 223699..223728
/locus_tag="PP1Y_Mpl2282"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73052"
misc_feature 223759..223776
/locus_tag="PP1Y_Mpl2282"
/note="Walker B; other site"
/db_xref="CDD:73052"
misc_feature 223783..223794
/locus_tag="PP1Y_Mpl2282"
/note="D-loop; other site"
/db_xref="CDD:73052"
misc_feature 223861..223881
/locus_tag="PP1Y_Mpl2282"
/note="H-loop/switch region; other site"
/db_xref="CDD:73052"
gene 224069..224530
/locus_tag="PP1Y_Mpl2287"
/db_xref="GeneID:10718068"
CDS 224069..224530
/locus_tag="PP1Y_Mpl2287"
/inference="protein motif:COG:COG0864"
/inference="similar to AA sequence:UniProt:Q2GAR7"
/note="assigned by KAAS to KEGG Orthology:K07722 CopG
family transcriptional regulator, nickel-responsive
regulator"
/codon_start=1
/transl_table=11
/product="CopG family transcriptional regulator"
/protein_id="YP_004538154.1"
/db_xref="GI:334144945"
/db_xref="GeneID:10718068"
/translation="MANETTNLARLSMSLPGDLFRQLDMMVEERGLPSRSQLIAELIR
HALAEHEAYTRPDEMLAGTITIVYRGDRGRVRHQLAQTQADYLKEVISSQHVFLEDDQ
SLEVLLVQGPASLLKELCDALRRVRGVQQLQLVTTTALLPPLYEQETEETA"
misc_feature 224084..224431
/locus_tag="PP1Y_Mpl2287"
/note="Predicted transcriptional regulators containing the
CopG/Arc/MetJ DNA-binding domain and a metal-binding
domain [Transcription]; Region: NikR; COG0864"
/db_xref="CDD:31204"
misc_feature 224096..224215
/locus_tag="PP1Y_Mpl2287"
/note="Ribbon-helix-helix protein, copG family; Region:
RHH_1; cl15783"
/db_xref="CDD:210183"
misc_feature 224249..>224431
/locus_tag="PP1Y_Mpl2287"
/note="NikR C terminal nickel binding domain; Region:
NikR_C; pfam08753"
/db_xref="CDD:204052"
gene 224527..225351
/locus_tag="PP1Y_Mpl2293"
/db_xref="GeneID:10718069"
CDS 224527..225351
/locus_tag="PP1Y_Mpl2293"
/inference="protein motif:COG:COG3665"
/inference="similar to AA sequence:UniProt:B8GWH6"
/note="KEGG: nar:Saro_0608"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538155.1"
/db_xref="GI:334144946"
/db_xref="GeneID:10718069"
/translation="MTETLANPLAARDHARGMAGTVVEAMPMLPPVAEDLPESVPAQD
LLWEETIAAGGYASRRLPRGSRLRLIDLKGDACASLLIFNAEMPSERLNVADTVKVQW
NAYLGEGKLLLSDMGRVLMSLVSDGAGTHDAFCGTSNAVMNSAKYGDGSNSGPHPNGR
DRFLLGAAKHGLQRRDIHPCINLFKGVRIETDGTITPLVGPFEPGRSLILRAEMDVIV
VIANCPHVLDPREDWSSTPLRATAWRGPITAEDDPIRTATPEGLRAFENVEDYFRR"
misc_feature 224656..225255
/locus_tag="PP1Y_Mpl2293"
/note="urea carboxylase-associated protein 1; Region:
urea_degr_1; TIGR03424"
/db_xref="CDD:132465"
misc_feature 224659..225342
/locus_tag="PP1Y_Mpl2293"
/note="urea carboxylase-associated protein 2; Region:
urea_degr_2; TIGR03425"
/db_xref="CDD:163257"
gene 225367..226005
/locus_tag="PP1Y_Mpl2305"
/db_xref="GeneID:10718071"
CDS 225367..226005
/locus_tag="PP1Y_Mpl2305"
/inference="protein motif:COG:COG3665"
/inference="similar to AA sequence:UniProt:C1R3M6"
/note="KEGG: nar:Saro_0607"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538156.1"
/db_xref="GI:334144947"
/db_xref="GeneID:10718071"
/translation="MSLDPHLSDLPGTVAHDVIVPARAPWLHHIAAGQTLRIVDLEGN
QAVDFLLYSAQDDTERYSAQDTVAAQGNLFLREGTVLRSNEGRAMMTITGTSVDYHDT
IGGACSCESNTLRYGHHTKAEHACVENFLEANLREGRGKRDIVSNINFFMNVPVEADG
SLGIVDGISAPGLTVDLRAEMDVIVVVSNCPQINNPCNGFNPTPVRMIVANA"
misc_feature 225403..225993
/locus_tag="PP1Y_Mpl2305"
/note="urea carboxylase-associated protein 1; Region:
urea_degr_1; TIGR03424"
/db_xref="CDD:132465"
misc_feature 225415..225918
/locus_tag="PP1Y_Mpl2305"
/note="Domain of unknown function (DUF1989); Region:
DUF1989; pfam09347"
/db_xref="CDD:192258"
gene 226002..229598
/locus_tag="PP1Y_Mpl2309"
/db_xref="GeneID:10718072"
CDS 226002..229598
/locus_tag="PP1Y_Mpl2309"
/inference="protein motif:COG:COG2049"
/inference="similar to AA sequence:UniProt:B0T079"
/note="KEGG: nar:Saro_0606"
/codon_start=1
/transl_table=11
/product="allophanate hydrolase subunit 2"
/protein_id="YP_004538157.1"
/db_xref="GI:334144948"
/db_xref="GeneID:10718072"
/translation="MKFDTVLIANRGAIATRIIRTLRRMGLRSVAVYSEADEGSLHVS
EADEAVCIGPARASESYLDIAAILKAAREAGADAIHPGYGFLAENVEFAEACAEAGIV
FIGPTCDNIRTFGLKHSARALAAAHGVPLAPGTDLLTDESAAAAAARRIGFPVILKAT
AGGGGIGMRVCEDEASVRESFAAVARQGQSNFGDAGIFLERYIRRARHIEVQIFGDGE
GRIRALGERDCSLQRRNQKVVEEAPAPLLPAKVRAELIAAAIRLGEAANYRSAGTVEF
LYDAEREEFFFLEMNTRLQVEHGVTEEVMGLDLVEWMIRGGAGDFSFLDEAPKQPSGH
SVQVRLYAEDPALDYRPTSGTLTSVEFPDDIRAETWIMAGSTVSIWYDPMLAKLIVHA
PSRSEAIAAMQDALDKCRIDGIETNLRWLRDVVRSEAFVSGEVSTRVLEGIAFKPRSI
RVVSGGTATTVQDWPGRQRLWAVGVPPSGPMDDQSFRLGNRLLGNPEGTAGLEMTITG
PTLTFSAPARICLTGADFGAALDGNPVARGQAIQVEAGQTLATGRLSGGGIRGYILFA
GGLDIAPYLGSRSTFELGQFGGHAARRLLAGDTLHLGDEATVAPLPDVDLPDLATEWT
VRVLYGPHGAPDFFTDEDIDEIVKVEWQVHYNSNRTGVRLVGPKPKWARTDGGEAGLH
PSNIHDNPYAIGAVDFTGDMPIILGPDGPSLGGFVCPFVVIAADRWKIGQLSPGDKLR
FAPITLDDAIAADQAQRRLLDEGVAHGTSEARPIAQLSPILAEIEESAVRPRTVYRQQ
GDRNILVEYGPIVLDIELRIRVHALMTELERLALPGILDVVPGIRSLQVHFDGKVLNQ
KATLAELIAAEERLGDLADFAIPSRIVHLPLSWRDPATLETIQKYMGAVRDDAPWCPD
NIEFIRRINGLPDTAAVENLIFEANYLVMGLGDVYLGAPVATPVDPRHRLVTTKYNPA
RTWTPPNVVGIGGSYMCIYGMEGPGGYQLFGRTIQVWNTHRQTDAFIEGKPWLLRFFD
QIRFYPVSADELVEWRRDFPSGRRSIRIEESEFRLADYRAFLAENADAIAEFEARRQT
AFDEERAEWQRSGEFDRIADTAEAEPPQAAAIDLPDGATLIEAPFGGSVWKLLVGAGD
EVQAGDTIAIIEAMKMECAVQSPGAGTIAAIYVQERQALQPGAPMLALKEGA"
misc_feature 226008..229586
/locus_tag="PP1Y_Mpl2309"
/note="urea carboxylase; Region: urea_carbox; TIGR02712"
/db_xref="CDD:188242"
misc_feature <226074..226322
/locus_tag="PP1Y_Mpl2309"
/note="Carbamoyl-phosphate synthase L chain, N-terminal
domain; Region: CPSase_L_chain; pfam00289"
/db_xref="CDD:201133"
misc_feature 226350..226883
/locus_tag="PP1Y_Mpl2309"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl03087"
/db_xref="CDD:207834"
misc_feature 227010..227324
/locus_tag="PP1Y_Mpl2309"
/note="Biotin carboxylase C-terminal domain; Region:
Biotin_carb_C; smart00878"
/db_xref="CDD:197946"
misc_feature 227418..228236
/locus_tag="PP1Y_Mpl2309"
/note="Allophanate hydrolase subunit 2; Region: AHS2;
smart00797"
/db_xref="CDD:197878"
misc_feature 228384..229145
/locus_tag="PP1Y_Mpl2309"
/note="Allophanate hydrolase subunit 1 [Amino acid
transport and metabolism]; Region: DUR1; COG2049"
/db_xref="CDD:32232"
misc_feature 229386..229583
/locus_tag="PP1Y_Mpl2309"
/note="The biotinyl-domain or biotin carboxyl carrier
protein (BCCP) domain is present in all biotin-dependent
enzymes, such as acetyl-CoA carboxylase, pyruvate
carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
carboxylase, geranyl-CoA carboxylase; Region:
biotinyl_domain; cd06850"
/db_xref="CDD:133459"
misc_feature order(229452..229454,229479..229487,229506..229508)
/locus_tag="PP1Y_Mpl2309"
/note="carboxyltransferase (CT) interaction site; other
site"
/db_xref="CDD:133459"
misc_feature 229482..229484
/locus_tag="PP1Y_Mpl2309"
/note="biotinylation site [posttranslational
modification]; other site"
/db_xref="CDD:133459"
gene 229601..231364
/locus_tag="PP1Y_Mpl2338"
/db_xref="GeneID:10718073"
CDS 229601..231364
/locus_tag="PP1Y_Mpl2338"
/EC_number="3.5.1.4"
/inference="protein motif:COG:COG0154"
/inference="similar to AA sequence:UniProt:Q9ALV2"
/note="assigned by KAAS to KEGG Orthology:K01426 amidase"
/codon_start=1
/transl_table=11
/product="amidase"
/protein_id="YP_004538158.1"
/db_xref="GI:334144949"
/db_xref="GeneID:10718073"
/translation="MLDRRSAAAIAADVNAGRTTAVAVAKETLSRLAAYDAIQAQVWI
SRLSVDAFLESARAVDARVKAGEVLPLAGVPFAAKDNIDVAGLETTAACPAFAYSPER
SATVIERLTQAGAICIGKTNLDQFATGLNGTRSPYGAPRNAYNLAYVSGGSSSGSSVA
VAAGLVPFALGTDTAGSGRVPAAFQHLIGYKPSKGRWSNKGLVPACRTLDCITVFTDN
VTDARLVDGVIAGFDAADPYSKALANRPLEYKRIGVPRRGQRVWFGDSESEYFYDRAL
DSLAQMAEIVEIDMAPFQEAAQLLYGGPWVAERTAAIATVLADSPEAIDPTVREVVEP
GLSMSAVELFNGIYRLAELKRHADLLWEGIDMLAFPTAGTTYRVSELLAAPVALNSAF
GFYTNFVNLLDMAAVAVPAGIRGNATGFGVTLIGPADTDCALLDAADAYLAAANLPQR
PPLDLEGKMQTVKLAVVGAHLKDMPLHWQLTSRNARFVGAFQTAPSYRLYAIADSVPP
KPALVHSPDGGEIAVEVYELDVAEFGSFVVEVPAPLAIGTVTLSDGSSVKGFVAEPRA
LAGAQDITELGGWRAFIARQG"
misc_feature 229601..231361
/locus_tag="PP1Y_Mpl2338"
/note="allophanate hydrolase; Provisional; Region:
PRK08186"
/db_xref="CDD:181276"
misc_feature 229694..230881
/locus_tag="PP1Y_Mpl2338"
/note="Amidase; Region: Amidase; cl11426"
/db_xref="CDD:212316"
misc_feature 231011..231283
/locus_tag="PP1Y_Mpl2338"
/note="GGCT-like domains, also called AIG2-like family.
Gamma-glutamyl cyclotransferase (GGCT) catalyzes the
formation of pyroglutamic acid (5-oxoproline) from
dipeptides containing gamma-glutamyl, and is a dimeric
protein. In Homo sapiens, the protein is...; Region:
GGCT_like; cl15777"
/db_xref="CDD:210177"
gene 231367..232308
/locus_tag="PP1Y_Mpl2357"
/db_xref="GeneID:10718075"
CDS 231367..232308
/locus_tag="PP1Y_Mpl2357"
/inference="protein motif:COG:COG3391"
/inference="similar to AA sequence:UniProt:Q2GAS2"
/note="KEGG: nar:Saro_0604"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538159.1"
/db_xref="GI:334144950"
/db_xref="GeneID:10718075"
/translation="MRNLPILATLLAAGLGVLPLTAQAHEEQVIEVPGFADFLAVDGN
SVWATNAGRVERWSRKGKLAEVAMSRPCGAMTIMAGSLWVADCEENALVRIDTRTARK
TATIPTGIANRDGELNVAAGAGSIWVASDNDVGKVSRIDPATDTVVATIPVDPGTWYL
AFGHGSLWAVSAKGRSIQRIDPKINAVVKRTALGKQPGFLAAGAGAVWVQEQGDGTVA
RIDPSTSEVTGRVKVGDVLKWGDIDTGGGKVWLRTTEDQTFAVIDPQSMKVRARVGKA
EGSGALRYTRAGLWTSAHDKHTLTWWPKPKKLEKPEK"
misc_feature <231496..>232041
/locus_tag="PP1Y_Mpl2357"
/note="Streptogramin lyase [Defense mechanisms]; Region:
Vgb; COG4257"
/db_xref="CDD:33980"
gene complement(232353..232679)
/locus_tag="PP1Y_Mpl2366"
/db_xref="GeneID:10718076"
CDS complement(232353..232679)
/locus_tag="PP1Y_Mpl2366"
/inference="similar to AA sequence:UniProt:Q2GAS3"
/note="KEGG: nar:Saro_0603"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538160.1"
/db_xref="GI:334144951"
/db_xref="GeneID:10718076"
/translation="MKIGLAVLATFAFATTAYAAPAENPFAKDEAVLTLKGIDLTTPE
GQERLAIRMDQAARAVCGDRLAGVHLALEAKAQECRTAVVADVRSQIETRSAMVPASD
RLAYNR"
gene complement(232805..233170)
/locus_tag="PP1Y_Mpl2369"
/db_xref="GeneID:10718077"
CDS complement(232805..233170)
/locus_tag="PP1Y_Mpl2369"
/inference="similar to AA sequence:UniProt:Q2GAS4"
/note="KEGG: nar:Saro_0602"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538161.1"
/db_xref="GI:334144952"
/db_xref="GeneID:10718077"
/translation="MSIYRIRNALSLTAILSAGIATPAAAEPRTRLVDCEAGSCLLVT
GRRADVGSAVSINGHAVAAQGGRKWQVSLPVKTLQDWSVPYARTITVSVADTHSQAAL
PIGLLGHVDNLDHLVVSVK"
gene complement(233193..234764)
/locus_tag="PP1Y_Mpl2377"
/db_xref="GeneID:10718078"
CDS complement(233193..234764)
/locus_tag="PP1Y_Mpl2377"
/inference="protein motif:COG:COG0457"
/inference="similar to AA sequence:UniProt:Q2GAS5"
/note="KEGG: nar:Saro_0601"
/codon_start=1
/transl_table=11
/product="sulfotransferase"
/protein_id="YP_004538162.1"
/db_xref="GI:334144953"
/db_xref="GeneID:10718078"
/translation="MTEMRSARVEAARSALSRGDLGATHRFATTLLSENPKDAEAHFL
LGVAESSTGRIRSGIRHIDRAVRLDPQGEYCANLAKLFTMVRQDGDAASMLQAAEQAL
PGDALSRDTMGCVYARLGNHAAALVHFSEAVRLEPGHAGYRYNQATTLNFLGRTEEAE
AALEALIALSPEDARAHHLLAGLRRQNPECNHIGRLAEIRGLARKPRDRLLLGYALAK
ELEDVGQLDEALDTLCCVNAEHRRTLPYAFERDAASFDAIEAAWPLPKPVGEAATDSP
IFVVGMPRTGTTLVDRILSSHPAVESAGELQAMPLAVKKAAGTRTPTVLDPDTIAAAA
GSDMAEIGRDFLQRANHHRRNPSLRFTDKFPGNFQYLGFIARALPASRIICLRRHPMD
TVLSNFRNLFAVTSRYYDYSYDLLDIAAYYMRFDRLMALWREALADRLIEVRYEDLIA
DQEGETRRILAHCGLDWDERCLSFHTNSAPVSTPSAAQVRQPIYASSVARWKRHGEVL
EPVRRIFENAGIAID"
misc_feature complement(234546..234737)
/locus_tag="PP1Y_Mpl2377"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:205610"
misc_feature complement(234354..234647)
/locus_tag="PP1Y_Mpl2377"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(234408..234413,234420..234425,
234432..234437,234513..234518,234525..234530,
234534..234539,234621..234626,234633..234638,
234642..234647))
/locus_tag="PP1Y_Mpl2377"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(234369..234371,234378..234380,
234390..234392,234426..234428,234471..234473,
234480..234482,234492..234494,234528..234530,
234570..234572,234579..234581,234591..234593,
234627..234629))
/locus_tag="PP1Y_Mpl2377"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(<234300..234452)
/locus_tag="PP1Y_Mpl2377"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(<234222..234431)
/locus_tag="PP1Y_Mpl2377"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(234222..234224,234267..234269,
234276..234278,234288..234290,234324..234326,
234369..234371,234378..234380,234390..234392,
234426..234428))
/locus_tag="PP1Y_Mpl2377"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(order(234228..234233,234309..234314,
234321..234326,234330..234335,234420..234425))
/locus_tag="PP1Y_Mpl2377"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(233217..233945)
/locus_tag="PP1Y_Mpl2377"
/note="Sulfotransferase domain; Region: Sulfotransfer_1;
pfam00685"
/db_xref="CDD:201393"
misc_feature complement(233367..233939)
/locus_tag="PP1Y_Mpl2377"
/note="Sulfotransferase family; Region: Sulfotransfer_3;
pfam13469"
/db_xref="CDD:205647"
gene complement(234761..235690)
/locus_tag="PP1Y_Mpl2390"
/db_xref="GeneID:10718080"
CDS complement(234761..235690)
/locus_tag="PP1Y_Mpl2390"
/inference="protein motif:COG:COG3000"
/inference="similar to AA sequence:UniProt:Q2GAS6"
/note="KEGG: nar:Saro_0600"
/codon_start=1
/transl_table=11
/product="sterol desaturase-like protein"
/protein_id="YP_004538163.1"
/db_xref="GI:334144954"
/db_xref="GeneID:10718080"
/translation="MQASLKDKVFNHIPPAMIAAVLLFWAFGPETLLKNSWTLTVTSP
LIVMAVLALEWLHERHAGWRMNKQEFLTDLYYSVLSATVIAWASEKLAEAPLTAAKAS
LGISTPWVAQMPWLAQVALAIFVLEFGQYWMHRLMHNWTPFWLTHAPHHHITQLNAAK
GAVGNPIELFLISLSVLALFDFDQTALFAAFNTMGVISVFAHANVRADPPIWYSFFFT
TIRHHSLHHSTDYESTRCNYGNSLILLDRIFGTYREGEGVLVGQDDRRRLSIWEQTLF
PFQPLIDKCHSRKKVGAGTAESTENDQNEPRPA"
misc_feature complement(234854..235552)
/locus_tag="PP1Y_Mpl2390"
/note="Sterol desaturase [Lipid metabolism]; Region: ERG3;
COG3000"
/db_xref="CDD:32818"
misc_feature complement(235007..235336)
/locus_tag="PP1Y_Mpl2390"
/note="Fatty acid hydroxylase superfamily; Region:
FA_hydroxylase; pfam04116"
/db_xref="CDD:202893"
gene complement(235779..236717)
/locus_tag="PP1Y_Mpl2399"
/db_xref="GeneID:10718081"
CDS complement(235779..236717)
/locus_tag="PP1Y_Mpl2399"
/inference="protein motif:COG:COG0583"
/inference="similar to AA sequence:UniProt:A7HSI1"
/note="KEGG: nar:Saro_0599"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_004538164.1"
/db_xref="GI:334144955"
/db_xref="GeneID:10718081"
/translation="MSERAPLIDRKFASRVDWNLMRTFVDIVRAGGIGAAARQLNRQQ
PSISAALKRLEDHVGVTLLHRTATGVEMTAAGKAMMALCEDMLESARMVPHQIAQATK
RVEGIVRIQIVSGLVSPEFDEAIASFHRRNPAIHIEIRVSPWRQVLDALEQGEVEIGV
GYDSSVRGSLMYEPLLVERQQLYCSRHSPYFGYRVSRLGELKDEGFVLTGEDEIEQIT
HLRRRYRLGTNVRGLAEDINEARRLILHGIGIGFLPILAAEGEVAAGRLWPMLHADFE
PSYDIFLLARTEPARDTATQLFWDEVMRRIRAQRRA"
misc_feature complement(235782..236669)
/locus_tag="PP1Y_Mpl2399"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(236487..236666)
/locus_tag="PP1Y_Mpl2399"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(235812..236396)
/locus_tag="PP1Y_Mpl2399"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cd05466"
/db_xref="CDD:176102"
misc_feature complement(order(235980..235985,235989..235994,
236010..236027,236295..236315,236319..236321,
236331..236333,236340..236345,236349..236354))
/locus_tag="PP1Y_Mpl2399"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 236835..237836
/locus_tag="PP1Y_Mpl2409"
/db_xref="GeneID:10718082"
CDS 236835..237836
/locus_tag="PP1Y_Mpl2409"
/inference="protein motif:COG:COG3491"
/inference="similar to AA sequence:UniProt:Q13MV5"
/note="KEGG: bpy:Bphyt_5231"
/codon_start=1
/transl_table=11
/product="2OG-Fe(II) oxygenase"
/protein_id="YP_004538165.1"
/db_xref="GI:334144956"
/db_xref="GeneID:10718082"
/translation="MTSASLPLVDISGLDSIRLEDRMAVARELDRACAQTGFLYIAGA
QLEPDLFRRLVDRAKTYFALDHETKMASYIGHSENHSGYVPVGEEQFPGAAADLKEAF
DVNCDYTSAHGRRRLLGPNCWPEMPGFREDVQAYYAHITRIGRRLFRGFALALGLDED
HFDPYLRHPPSQLRLIHYPFDAAAQDRPGIGAHTDYECFTLLFATAPGLQILDKQGVW
MDVPLIEGTMIMNIGDMMEILSNGRFVATRHRVKKVKEERYSFPLFLTCDYDYVIAPV
LRGEAPRYAPLKGGEHLFNQTAQTFAYLKRRVECGELVLSNAVPPNSFGQRANGTTS"
misc_feature 236835..237743
/locus_tag="PP1Y_Mpl2409"
/note="Isopenicillin N synthase and related dioxygenases
[General function prediction only]; Region: PcbC; COG3491"
/db_xref="CDD:33294"
misc_feature 236850..237209
/locus_tag="PP1Y_Mpl2409"
/note="non-haem dioxygenase in morphine synthesis
N-terminal; Region: DIOX_N; pfam14226"
/db_xref="CDD:206394"
misc_feature 237339..237629
/locus_tag="PP1Y_Mpl2409"
/note="2OG-Fe(II) oxygenase superfamily; Region:
2OG-FeII_Oxy; pfam03171"
/db_xref="CDD:190552"
gene 237833..238720
/locus_tag="PP1Y_Mpl2413"
/db_xref="GeneID:10718083"
CDS 237833..238720
/locus_tag="PP1Y_Mpl2413"
/inference="similar to AA sequence:UniProt:A4XS12"
/note="KEGG: pmy:Pmen_1363"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538166.1"
/db_xref="GI:334144957"
/db_xref="GeneID:10718083"
/translation="MNIADLMRELPETGLDGLAFPRNLLGAFRRKSITFCTGLTDETT
LVYWFQSRSFTIDLRLPDGAETAIAARQGWIGDTLWDPDRKELSWTIVRSYQPGNQWP
EPATFQFIGNCVLEFAPSGAYVEDWRQQCSFGPILGLRLLALRDDETGREVPVDGGLI
VAGRHMAYVQSRLPQVDAAVNAEPSLEEALARGIATEPEIESHEVSVAIDGHAVKYST
RTDVLGTDIAAGDFKLQDDRTITLAKHVDDRACTLRFSLDLHVRDFPFDRQTPCTAQA
QAWIESEQGHLARHAVVTY"
gene 238930..239925
/locus_tag="PP1Y_Mpl2433"
/db_xref="GeneID:10718084"
CDS 238930..239925
/locus_tag="PP1Y_Mpl2433"
/inference="protein motif:COG:COG3000"
/inference="similar to AA sequence:UniProt:Q2GAR1"
/note="KEGG: nar:Saro_0615"
/codon_start=1
/transl_table=11
/product="sterol desaturase-like protein"
/protein_id="YP_004538167.1"
/db_xref="GI:334144958"
/db_xref="GeneID:10718084"
/translation="MDGVRVGKRLIGTQAPVTVGWENIPKVEGGPVKQFVFTWFQPTV
LFALIAFWYYAPNSIAKASTAIGIGIGFRVLLLALEWVNPRYESWRLTWKELVTDLFY
VGLGYTILNLVDQYIGSDAVIEALQHAFDWDKLAWFVGLPLLLQAFLISFIFDFGQYW
MHRGMHNWYPLWLPHSVHHYITQLNINKGAVGNPVELFLIGLGIGGFFDFLPRAALLA
GAIGMAVSTYQHINVRFNTPRWWRFLFNTTEHHSVHHSQDFEATRSNYSGTYIFIDRI
FGTCIDGEAELLGMEGGRRMSIREQMTFPFTEGWKTIKEKYGRERYTRAETVPAE"
misc_feature 239071..239856
/locus_tag="PP1Y_Mpl2433"
/note="Sterol desaturase [Lipid metabolism]; Region: ERG3;
COG3000"
/db_xref="CDD:32818"
misc_feature 239371..239697
/locus_tag="PP1Y_Mpl2433"
/note="Fatty acid hydroxylase superfamily; Region:
FA_hydroxylase; pfam04116"
/db_xref="CDD:202893"
gene 240001..240627
/locus_tag="PP1Y_Mpl2444"
/db_xref="GeneID:10718086"
CDS 240001..240627
/locus_tag="PP1Y_Mpl2444"
/inference="similar to AA sequence:UniProt:Q2GAR0"
/note="KEGG: nar:Saro_0616"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538168.1"
/db_xref="GI:334144959"
/db_xref="GeneID:10718086"
/translation="MNARFIEWIWHIKGSLPLAPGQSSDDAFHRLAPLFQEAGTNYSQ
QDDTLSFSKKDQAAQDKMSVFDAGVLQIERSGSGPVLHYHLVSRALLFCFLAPLLFLG
FAQLTVFLGDLEKPSTEAATEKPDKKKASVLPQHPIDKALGAPAPELPKKDAADDEGK
KPSPTSAYVFAAIFAVLYSVGRVLEAGLIKSVFRKKLQGSQAHEPVPG"
gene complement(241174..242898)
/locus_tag="PP1Y_Mpl2459"
/db_xref="GeneID:10718087"
CDS complement(241174..242898)
/locus_tag="PP1Y_Mpl2459"
/inference="protein motif:COG:COG1053"
/inference="similar to AA sequence:UniProt:A3VAM3"
/note="KEGG: tro:trd_1806"
/codon_start=1
/transl_table=11
/product="3-ketosteroid dehydrogenase"
/protein_id="YP_004538169.1"
/db_xref="GI:334144960"
/db_xref="GeneID:10718087"
/translation="MSGAIAAVPCSIPSDDIGRNRGRNERVAGDDFNFIVIGSGAAGM
VGAITASRGGLKPIIIEKADSWGGTTATSGGVLWVPGNDLMQGQGAGEDPELARSYVH
ALLGEEAGAREIAKADAFLENAPQMARMLAEEGVDWIRASEHPDYYPGVPGSSKGRII
ESAAFDGHRLGARFRTMRLADLDLPAINSGQFATLTRAWTSPRLFVEAARTVICHLLR
KLRGQKPLGNGRALAASLMNIALKRDIPIRLSTRLVDLVVEDGAVTGVIVEREGRRER
LDAPAGVLLAAGGFAQNKALRRELQGRDQSWSNAIPEDEGDAFQAAGAIGAASELTDD
CWWMPSIQISPELNGLVLALRALPGSIIVNAGGERYMNEARSYMTTGRVMYENGAASE
RHWLILDGRFLKRYIFADLSKKAIRKKMMDNGYLKRADTIADLAGQCGIDPSQLEATV
GRFNQFARAGKDGDFGRGETDYDRYWADPAHSPNSSLGEISRPPFWAAVIRPGDLGTN
GGIKTDCHGRVLNVEGRPIAGLYAAGNSSGSPFGHAYPGAGATIAAAATFGYLSGSFA
ARRNSNVA"
misc_feature complement(241186..242805)
/locus_tag="PP1Y_Mpl2459"
/note="3-ketosteroid-delta-1-dehydrogenase; Reviewed;
Region: PRK12844"
/db_xref="CDD:183787"
gene 243177..243788
/locus_tag="PP1Y_Mpl2484"
/db_xref="GeneID:10718088"
CDS 243177..243788
/locus_tag="PP1Y_Mpl2484"
/inference="protein motif:COG:COG1309"
/inference="similar to AA sequence:UniProt:Q1GQV3"
/note="KEGG: sal:Sala_2260"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_004538170.1"
/db_xref="GI:334144961"
/db_xref="GeneID:10718088"
/translation="MECSASTKTRGRPREFDPEEALASALRVFWKHGYEGASMAELTE
AMGITKPSLYACFGNKEALFRKALDLYERDKLCYIKTSLDAPTAREVANRILRGAVKT
HCGESDPQGCMGVISSVACTTEAESIRKEVVARRASSEAAVVERFEKAKAEGDLPEHV
DAKALAQCLLTVLQGLSVKAQVGAERKDLEAVVDTFLAMWPGR"
misc_feature 243189..>243452
/locus_tag="PP1Y_Mpl2484"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature 243240..243371
/locus_tag="PP1Y_Mpl2484"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 244220..244627
/locus_tag="PP1Y_Mpl2497"
/db_xref="GeneID:10718090"
CDS 244220..244627
/locus_tag="PP1Y_Mpl2497"
/inference="similar to AA sequence:UniProt:Q1NF19"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538171.1"
/db_xref="GI:334144962"
/db_xref="GeneID:10718090"
/translation="MAFIDFTDAAPEALAAPANRSVQDTRRFPSVSALSDLEHRIVEL
ARGDGLETLRPQRKRSWLGRLILGPQPISPELANERLEALRKLAVQAWHKGYTLPVSA
VREAQAAGYSEAQVGAVIDTIGRMRVPFRRLAA"
gene 244795..245898
/locus_tag="PP1Y_Mpl2495"
/db_xref="GeneID:10718092"
CDS 244795..245898
/locus_tag="PP1Y_Mpl2495"
/inference="ab initio prediction:grc:1.0"
/inference="protein motif:COG:COG0845"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538172.1"
/db_xref="GI:334144963"
/db_xref="GeneID:10718092"
/translation="MPVPQVQAANPLVREVTQWDDYVGRFAPSQSVEVRPRVSGAITR
IHFKDGEFVRQGQPLFTVDQRPYRAALAEAQADVAAARSAVALARSDYDRVAGLSGDE
AMAASEVDQLRTRMHSAQAALAAAQARARQRALDVEFTTVRAPISGRISDRRVDVGNL
VSGDNNANATLLTTINAVDPIYFTFDASEALFLKARREQEQGHAPARVQVRLQDEADY
KWNGRLDFTDNGLDPRSGTIRVRAVLDNPKGFLTPGMFGNMRLAEGAKAKALLVPDDA
VQSDQARKVVLTVGRDGTVAAKPVELGPLVDGLRVIRSGLSKEDRVVISNYQAAVTGA
KVETRRGMIAADTHTITAPGASVPMASQATLNN"
misc_feature 244810..245802
/locus_tag="PP1Y_Mpl2495"
/note="RND family efflux transporter, MFP subunit; Region:
RND_mfp; TIGR01730"
/db_xref="CDD:162505"
misc_feature 244882..>244998
/locus_tag="PP1Y_Mpl2495"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature 245215..245556
/locus_tag="PP1Y_Mpl2495"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene 245961..249149
/locus_tag="PP1Y_Mpl2516"
/db_xref="GeneID:10718091"
CDS 245961..249149
/locus_tag="PP1Y_Mpl2516"
/inference="protein motif:COG:COG0841"
/inference="similar to AA sequence:UniProt:A8IKH7"
/note="KEGG: swi:Swit_1153"
/codon_start=1
/transl_table=11
/product="hydrophobe/amphiphile efflux-1 (HAE1) family
protein"
/protein_id="YP_004538173.1"
/db_xref="GI:334144964"
/db_xref="GeneID:10718091"
/translation="MRFSRFFIDRPIFAGVIAVIITVVGALAFIGLPVTQYPDIVPPT
VTVSAQYPGASAETVADTVAAPIEQEINGVDDMLYMDSQSTGDGKVTITVTFKIGTDL
DAAQVLVQNRVAVATPRLPQEVQQLGVVTRKSSPDFLMVVNLQSPDRTFDRDYLSNYA
LTQVKDKLARIDGVGDVRLFGARDYGMRIWIDPGKAAALDLTAGEIVSALRAQNVQVS
SGALGQPPFDTGNAYQIGVELQGRLKTPEQFGDVIVRTDADGRQVRVRDVARVELGAQ
DYTTNTYLSGNPTVVMAVMQRPGSNALNSAQAVRAQMDELSQSFPQGLEYSVIYNPTE
FIGQSIDAVYHTLLEAVVLVVLVILVFLQNWRAAIIPIVAIPVSLIGTAVMLAAVGYS
LNNLSLFGMVLAIGIVVDDAIVVVENVERYIEEGMRPIEAARRSMDEVSSALVAIVLV
LCAVFVPTLFISGISGAFYKQFAVTISTATAISLLISLTLSPALAAILLRERHPLPAD
APRWRRVLQSAADGFNHGFERMSAAYAGLTLRLVRKPLRMMATYGALIAATVGLFWAT
PTGFVPQQDQGYFMAAIFLPPGSSLSRTDEATQEVAKRILPVKGLRGAVMFAGFHGPS
RTAAPDAAAIYFPFKSFEERRKLGVTYAGIMEQAQAALQGFDKAQVLLLPPPTINGIV
PPGGYRMIVEDKDGRGYAELAKAAGAMIAQANQTPELKQVYTLFNLNTPRVYADVDRR
KADMLGVPPERVFEALQVYLGSAFVNDFNLLGRTYRVTAQADSPYRGTTADIANLKTR
SNSGAMVPIGSVATFEDKTGPYRVVRYNLQRAVEVDGSVAPGYSTGQALTTMERIADD
ALPAGYGHEWTGIAFQQTTAGNTAGVVFGMAVLFVFLVLAAQYESLTLPLAIILIVPM
CLFAAMLGVDIRGMDNNILTQIGLVVLIALAAKNAILVVEFAKQAEDEQGMSPVEAAV
FAARTRLRPILMTSFAFILGAVPLVIAQGAGAELRQALGTAVFFGMVGVTGFGLLFTP
TFYVVCRALGERLRRRPSAGSHGNHPLPAPAE"
misc_feature 245967..249101
/locus_tag="PP1Y_Mpl2516"
/note="The (Largely Gram-negative Bacterial)
Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Region:
2A0602; TIGR00915"
/db_xref="CDD:162104"
gene 249164..250600
/locus_tag="PP1Y_Mpl2540"
/db_xref="GeneID:10718094"
CDS 249164..250600
/locus_tag="PP1Y_Mpl2540"
/inference="protein motif:COG:COG1538"
/inference="similar to AA sequence:UniProt:A5V5F4"
/note="KEGG: swi:Swit_1154"
/codon_start=1
/transl_table=11
/product="RND efflux system outer membrane lipoprotein"
/protein_id="YP_004538174.1"
/db_xref="GI:334144965"
/db_xref="GeneID:10718094"
/translation="MKTRSFLAALLAATSLAACAAGPDYIAPTPLPRGDAAFIGARSS
AVSTDAVQSDWWRLYDDPVLDALVLDALAANTDIRVAVARIERARASLRGSRSETLPQ
TAIEGSGTYGRASQARTLPGADREGRTVDAGLSVSYELDLFGRVSRGVEASRADLSAA
QEDADAVRVTVVADTVRAYVDAASYAEQLAVAQRTVDLLDRSVRITGARFERGLNQKL
DVIRVTQLRDEQAATIPALQAQRDAALFRLATLTGKTPQDLPEAARERTTTPDVQQPI
PVGDGQALLARRPDVRAAERRLAADTARIGVATADLYPRITLGGSIGTTAVGATDIFA
GGPLRWLLGPLISWAFPNQEAIRARIGEAKADTKADLAAFDGTVLRALEETETALSAY
RNALLRKEQLASAREAADRAAQVSIARQSRGQIDALDVLDAQRTLARSEAAYTQATQG
VARAQVDLFRALGGTWQEWPQGLASAQH"
misc_feature 249227..250555
/locus_tag="PP1Y_Mpl2540"
/note="efflux transporter, outer membrane factor (OMF)
lipoprotein, NodT family; Region: outer_NodT; TIGR01845"
/db_xref="CDD:162557"
gene 250815..253910
/locus_tag="PP1Y_Mpl2559"
/db_xref="GeneID:10718095"
CDS 250815..253910
/locus_tag="PP1Y_Mpl2559"
/EC_number="2.7.3.-"
/inference="protein motif:COG:COG0784"
/inference="similar to AA sequence:UniProt:B9K3H3"
/note="KEGG: mes:Meso_1942"
/codon_start=1
/transl_table=11
/product="multi-sensor hybrid histidine kinase"
/protein_id="YP_004538175.1"
/db_xref="GI:334144966"
/db_xref="GeneID:10718095"
/translation="MKDKIKSGHPSLIYFGLALSLLLPFLADLTFPLGTAVWVVYLLP
VVLAYVAPSPLVPPVIAAVATLLAILGFLFAPAGIDPTLAITNRSVGTAVTWLLAGVG
YLFVRNRLTVLHERWLQAGQVGLAREISGEKKLDELGDAALRYLSGYLGARAGAIYIR
NGQGYRRHATYGVPAEAPIPSSFDIGDGLLGQAVRERRAFVLDQVPDGYLYFGSGLGQ
AKPATLLIANTYADGVVNAVIELGLPAGRIDHAREFLERIEGQLGVAIRSGKYRERLQ
ELLAETQQQAEELQAQSEELRASNEELETQSRQLQDSAKELEAQQSELEQTNAQLEEQ
ARQLEVQRDDLTRAQKSLKAQAGDLEQASRYKSEFLANMSHELRTPLNSLLIMARLLA
ENRSGNLTEEQVKHAQTIETSGNDLLILINDVLDISKIEAGKVELDPHVTGVSGIAEK
LRRLFEPAATNKGLDFAIEIEEPDLALETDPQRVEQVLKNFLSNAIKFTERGRIALSV
ARQDDDRIAFTVHDTGVGIPADQQGAIFEAFRQADGSVSRKYGGTGLGLSISRELAHL
LGGEVSVESEPGEGSAFSLILPAKFSSPTGEVAQRPAPKPSAPRNKPAPAACPPARSS
HAPEDDRERLAADGRVILIVEDDPVFAQILRDLVREQGFSTLIADTADEGALLARQYI
PSAVILDMNLPDHTGLSVLDRIKRDVRTRHIPVHVVSVDDESQTALASGAMGYLFKPV
QREQLVQMLDSLEQRMVQRMRRVLVVEDDAKQAESVSLLLGSRDVETVEAFSAAQCFE
MLERESFDCMVLDLNLPDASGMELLERLSADESMPFPPVIVYTGRDLSAAEELKLRRY
SKSIIVKGAKSPERLLDEVTLFLHKVVSDLPEPQQQLIVKSLNRDEALQGRNVLVVED
DIRNIYALSSVLEPHGVNVRIARNGIEALNSLDEAMTGNTPVELILMDVMMPEMDGLT
ATRKIREREWGRSLPIIALTAKAMERDQQECIEAGASDYLSKPLDVDKLLSLVRVWMP
R"
misc_feature 251217..251615
/locus_tag="PP1Y_Mpl2559"
/note="GAF domain; Region: GAF_2; pfam13185"
/db_xref="CDD:205366"
misc_feature 251217..251612
/locus_tag="PP1Y_Mpl2559"
/note="GAF domain; Region: GAF_3; pfam13492"
/db_xref="CDD:205670"
misc_feature 251910..>252056
/locus_tag="PP1Y_Mpl2559"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(251919..251921,251931..251933,251943..251945,
251952..251954,251964..251966,251973..251975,
252030..252032,252042..252044,252051..252053)
/locus_tag="PP1Y_Mpl2559"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 251937..251939
/locus_tag="PP1Y_Mpl2559"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 252264..>252515
/locus_tag="PP1Y_Mpl2559"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(252282..252284,252294..252296,252303..252305,
252372..252374,252378..252380,252384..252386,
252390..252395,252474..252485)
/locus_tag="PP1Y_Mpl2559"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 252294..252296
/locus_tag="PP1Y_Mpl2559"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(252384..252386,252390..252392,252474..252476,
252480..252482)
/locus_tag="PP1Y_Mpl2559"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 252735..253064
/locus_tag="PP1Y_Mpl2559"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 252738..253067
/locus_tag="PP1Y_Mpl2559"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(252747..252752,252879..252881,252903..252905,
252969..252971,253017..253019,253026..253031)
/locus_tag="PP1Y_Mpl2559"
/note="active site"
/db_xref="CDD:29071"
misc_feature 252879..252881
/locus_tag="PP1Y_Mpl2559"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(252888..252893,252897..252905)
/locus_tag="PP1Y_Mpl2559"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 253026..253034
/locus_tag="PP1Y_Mpl2559"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 253116..253451
/locus_tag="PP1Y_Mpl2559"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(253116..253118,253245..253247,253269..253271,
253335..253337,253392..253394,253401..253406)
/locus_tag="PP1Y_Mpl2559"
/note="active site"
/db_xref="CDD:29071"
misc_feature 253116..>253346
/locus_tag="PP1Y_Mpl2559"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 253245..253247
/locus_tag="PP1Y_Mpl2559"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(253254..253259,253263..253271)
/locus_tag="PP1Y_Mpl2559"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 253401..253409
/locus_tag="PP1Y_Mpl2559"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 253539..253892
/locus_tag="PP1Y_Mpl2559"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 253542..253901
/locus_tag="PP1Y_Mpl2559"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(253551..253556,253698..253700,253722..253724,
253788..253790,253845..253847,253854..253859)
/locus_tag="PP1Y_Mpl2559"
/note="active site"
/db_xref="CDD:29071"
misc_feature 253698..253700
/locus_tag="PP1Y_Mpl2559"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(253707..253712,253716..253724)
/locus_tag="PP1Y_Mpl2559"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 253854..253862
/locus_tag="PP1Y_Mpl2559"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 253895..254767
/locus_tag="PP1Y_Mpl2578"
/db_xref="GeneID:10718096"
CDS 253895..254767
/locus_tag="PP1Y_Mpl2578"
/EC_number="2.1.1.80"
/inference="protein motif:COG:COG1352"
/inference="similar to AA sequence:UniProt:Q1N9J3"
/note="assigned by KAAS to KEGG Orthology:K00575
chemotaxis protein methyltransferase CheR"
/codon_start=1
/transl_table=11
/product="chemotaxis protein methyltransferase CheR"
/protein_id="YP_004538176.1"
/db_xref="GI:334144967"
/db_xref="GeneID:10718096"
/translation="MDAALIETFEPHEEIELDLLLEAIWRHYHYDFRGYSRGSLHRRL
VRAMQRFHCASLSELQHRILREPAAFAELMGFLTIQVSEMFRDPGYFRVLRENVIPHL
KTFPSIKIWIAGCANGEEFYSLAILLREEGLEDRAIFYCTDISPAALKRAQAGVYDLD
RMAQFTENHQQSGARTSLSDHYTAAYGSAIFDKSLRRRAVFAEHNLASDEVFSEVHLV
SSRNVLIYFDRPLQDRALGLFADSLVRGGFVGLGTKETLRLSRYSPAFGDFDDHMKIY
RRNTLPLREITHAP"
misc_feature 253964..254731
/locus_tag="PP1Y_Mpl2578"
/note="Methylase of chemotaxis methyl-accepting proteins
[Cell motility and secretion / Signal transduction
mechanisms]; Region: CheR; COG1352"
/db_xref="CDD:31543"
misc_feature 253964..254095
/locus_tag="PP1Y_Mpl2578"
/note="CheR methyltransferase, all-alpha domain; Region:
CheR_N; pfam03705"
/db_xref="CDD:202731"
misc_feature 254132..254665
/locus_tag="PP1Y_Mpl2578"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cl16911"
/db_xref="CDD:213141"
gene 254757..256574
/locus_tag="PP1Y_Mpl2588"
/db_xref="GeneID:10718097"
CDS 254757..256574
/locus_tag="PP1Y_Mpl2588"
/EC_number="2.7.3.-"
/inference="protein motif:COG:COG3920"
/inference="similar to AA sequence:UniProt:Q1N9J4"
/note="KEGG: mes:Meso_1944"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_004538177.1"
/db_xref="GI:334144968"
/db_xref="GeneID:10718097"
/translation="MHPDPIRILAVDDIAENLVALDALLADGEVEILQARSGEEALEL
LLCHDVALALLDVQMPGMDGFELAELMRGLERTRSIPILFLTAVATDERRRFRGYEAG
AVDYLLKPVDTHILRSKVNVFTELYAHRRELARQRDDLATALARITAHSDNSPLAIVE
LDSAQQVIAWSNGAERLFGWRAAEVKGYNASRIGWLSAEDADTFSALVGNMIDGKANR
ETHTLRFLTTTGFTLTCECYCSAIYDPAGQLISVNVQILDITDRVRAEEAQRLLNGEL
NHRVKNTLATVQAISRQTLRFSSGPGDFSTTFLGRIDALAKAHSLLSSATWQGADLRQ
LIAGQVAIGTFDPARVEAQGPDVDLGPEPALHLALVLHELVTNAHKYGALSGPEGTVS
LNWEIADDRLKLDWVESGGPLVEAPTRTGFGKTMIERSLAADGGGATMHADPAGMKWE
LVLPCPASARAARKQPEAQGDVMRKPDAEAPVCTLADMRILVIEDEPLVSIELMTIIE
DAGGIVTGSASTVASALRLIESTEADGAILDGNLRGESVEGIAATLQARGIPFAFVSG
YGRENLPAGSEDVPLLSKPFRSDQIVSAINAFTKLAAPS"
misc_feature 254778..255092
/locus_tag="PP1Y_Mpl2588"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 254781..255119
/locus_tag="PP1Y_Mpl2588"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(254790..254795,254922..254924,254946..254948,
255012..255014,255072..255074,255081..255086)
/locus_tag="PP1Y_Mpl2588"
/note="active site"
/db_xref="CDD:29071"
misc_feature 254922..254924
/locus_tag="PP1Y_Mpl2588"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(254931..254936,254940..254948)
/locus_tag="PP1Y_Mpl2588"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 255081..255089
/locus_tag="PP1Y_Mpl2588"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 255210..255560
/locus_tag="PP1Y_Mpl2588"
/note="PAS domain S-box; Region: sensory_box; TIGR00229"
/db_xref="CDD:211562"
misc_feature 255510..256118
/locus_tag="PP1Y_Mpl2588"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG3920"
/db_xref="CDD:33706"
misc_feature 255579..255824
/locus_tag="PP1Y_Mpl2588"
/note="HWE histidine kinase; Region: HWE_HK; smart00911"
/db_xref="CDD:197979"
misc_feature 256224..256544
/locus_tag="PP1Y_Mpl2588"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 256227..256550
/locus_tag="PP1Y_Mpl2588"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(256236..256241,256371..256373,256395..256397,
256449..256451,256491..256493,256506..256511)
/locus_tag="PP1Y_Mpl2588"
/note="active site"
/db_xref="CDD:29071"
misc_feature 256371..256373
/locus_tag="PP1Y_Mpl2588"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(256380..256385,256389..256397)
/locus_tag="PP1Y_Mpl2588"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 256506..256514
/locus_tag="PP1Y_Mpl2588"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 256769..257458
/locus_tag="PP1Y_Mpl2603"
/db_xref="GeneID:10718098"
CDS 256769..257458
/locus_tag="PP1Y_Mpl2603"
/inference="similar to AA sequence:UniProt:A5V611"
/note="KEGG: swi:Swit_4407"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538178.1"
/db_xref="GI:334144969"
/db_xref="GeneID:10718098"
/translation="MSKKPSEFNRRNLLFAGATFAAAALIKRSSPAPVPALPSASARP
WRSPAVARHSSVGPKFDVNPKLLEKALAALDTHSGRIRDHGRIAFVDFSVSSSRRRMH
FLDIENGKTKQILVAHGSGSDPDHTGFVERFSNAIGSNASSQGAFLTDDYYVGKHGRS
QRLIGLDPTNDNALDRAIVLHSAWYANEDMIHTHGMLGRSQGCFAVGETHLDDLFSFL
GKGRMIYAGRA"
misc_feature 256943..257386
/locus_tag="PP1Y_Mpl2603"
/note="L,D-transpeptidase catalytic domain; Region:
YkuD_2; pfam13645"
/db_xref="CDD:205822"
gene 257583..258971
/locus_tag="PP1Y_Mpl2611"
/db_xref="GeneID:10718099"
CDS 257583..258971
/locus_tag="PP1Y_Mpl2611"
/inference="protein motif:COG:COG2989"
/inference="similar to AA sequence:UniProt:B4WA00"
/note="KEGG: pzu:PHZ_c2668"
/codon_start=1
/transl_table=11
/product="peptidoglycan binding domain-containing protein"
/protein_id="YP_004538179.1"
/db_xref="GI:334144970"
/db_xref="GeneID:10718099"
/translation="MTLAGCGATSGDANGQASGSGQLSWSSSNQRQLREALGQRAVHG
LDHVTFAADGASQAGEAFTQEALRYARALAQGASSPEELFKIYTIPRPHPDLLQGLTR
ALADGNLESWLNGLAPQSAAYRHLSKAYMELKNKQASPSPQIPLEEDPLEPGDSDPRV
AAVARQLAASDYLDNPSGTGNRYSPDMVRAVKRMQADYGIKPDGIIGKDALEILNFSD
TDRARALAVAMERLRWLERDPPETRIDVNTAAGRLTYWRDGKVVDTRKAVVGEPGRET
PQLGSPIYRLVANPTWTVPRSIQEKEFAGKGGDYLQSHNMAWQNGWIVQQSGPENSLG
LVKFDMKNDHAIYLHDTPAKSLFQEVQRQRSHGCVRVQDALGFAELLARDEGVLDQWR
KSRAKGDETFVPLPREIPVRLLYQTVLFDAKGAPVVRADPYAWDDRVAVALGFPLAKS
HLLRNPSGDVGP"
misc_feature <257778..258911
/locus_tag="PP1Y_Mpl2611"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG2989"
/db_xref="CDD:32808"
misc_feature 258048..258224
/locus_tag="PP1Y_Mpl2611"
/note="Putative peptidoglycan binding domain; Region:
PG_binding_1; pfam01471"
/db_xref="CDD:201815"
misc_feature 258303..>258455
/locus_tag="PP1Y_Mpl2611"
/note="L,D-transpeptidase catalytic domain; Region: YkuD;
pfam03734"
/db_xref="CDD:202749"
misc_feature <258618..258725
/locus_tag="PP1Y_Mpl2611"
/note="L,D-transpeptidase catalytic domain; Region: YkuD;
pfam03734"
/db_xref="CDD:202749"
gene 259188..259769
/locus_tag="PP1Y_Mpl2626"
/db_xref="GeneID:10718100"
CDS 259188..259769
/locus_tag="PP1Y_Mpl2626"
/inference="protein motif:COG:COG2202"
/inference="similar to AA sequence:UniProt:B1ZH86"
/note="KEGG: mrd:Mrad2831_4431"
/codon_start=1
/transl_table=11
/product="putative PAS/PAC sensor protein"
/protein_id="YP_004538180.1"
/db_xref="GI:334144971"
/db_xref="GeneID:10718100"
/translation="MEHGDACVQDETVPEKLRTFFQDSPVALALAAPARDNPLILVNG
RFVALTGYSNAELVGRNCRVLQQDADNREARAKLRAFLDDEDAPNVRTPILNFTKDGT
PFVNLLYMSRLRQADGEARYIFASQFDVSRARPERLQAYDRDLGQTLTKLSPVAAESG
IIVEATLTSIANSAATIAQAKLSLAGLDDSSLL"
misc_feature 259290..259577
/locus_tag="PP1Y_Mpl2626"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature 259293..259580
/locus_tag="PP1Y_Mpl2626"
/note="PAS domain; Region: PAS_9; pfam13426"
/db_xref="CDD:205604"
misc_feature order(259311..259313,259323..259325,259341..259343,
259380..259391,259467..259469,259488..259490)
/locus_tag="PP1Y_Mpl2626"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(259371..259373,259383..259385,259407..259409,
259416..259421,259509..259511,259515..259517)
/locus_tag="PP1Y_Mpl2626"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
gene 259787..263209
/locus_tag="PP1Y_Mpl2632"
/db_xref="GeneID:10718101"
CDS 259787..263209
/locus_tag="PP1Y_Mpl2632"
/EC_number="3.1.1.61"
/inference="protein motif:COG:COG1352"
/inference="similar to AA sequence:UniProt:B1M4A1"
/note="assigned by KAAS to KEGG Orthology:K03412
two-component system, chemotaxis family, response
regulator CheB"
/codon_start=1
/transl_table=11
/product="two-component system, chemotaxis family,response
regulator CheB"
/protein_id="YP_004538181.1"
/db_xref="GI:334144972"
/db_xref="GeneID:10718101"
/translation="MDAGNRADAGTSVPVIGIGASAGGLEALREMLSAARPPTNLAFV
VVQHLDPNHESLLAQLLDRASPLDVLQCEGGEELQPERVYIIPPGRGLAIREGKLQLT
DFAQPRGLRRPIDDFFISLAADQQANAACVILSGTGADGSTGLRAIKEHGGVCVVQQP
ETARYDGMPVAAVGTGLVDYVKAPGEILDCLLSFFQRRSGEPQDQAGRLVADHVDDLC
ATLRKVIGHDFSGYKRSTLVRRVERRMHVLSIDSTSAYVQRVRTDPGECEALFRDLLI
NVTRFFRDPDMFEALRARVVEPLLKERNAEEEIRVWVPGCSSGEEAYSIAMLFAEAAR
DQGLANPVQIFATDIDEQMLQVAREGSYPAAALADIPSPMRERWTVPHGERFSIAGQI
RDLIRFSNHSVIKDPPFSRIDLVSCRNLLIYFDDRLQQSVMPILHYALKPGGYLFLGP
SESIGRFDNMFPALDHHAHIFERAPGDPIYPIDLPANEYNQPSRNSSSAMNIGKMKIS
EGGMAIKRLAEGYAPPAMVVNQDGAVLSAYGKLSRYFDFPVTRTGGSNAISLAKPGLR
DVLGPLVRQARDSGKRVIAREVDVTSDYGVQPIEAIGEPLGDGTLLLIFRDRGPFAPF
AAADLSEIESGDDHMEALEEELRLTRHKLRTAVEELETANEELKSSNEEMMSMNEELQ
STNEELSTVNDELKSKVDQLTVANSDLRNFFESTELAVIILDRDLRIRSYTEAATTIF
PLQVTDRGRSLADVATRLDEGNYLDDARAVATHGEPVQRRVHTRDGKRTLSLRVLPYR
TQHGTIDGATLVLTDITEALSMEHDLAAERERLDLAIRAGGIGVWEYSVDSGELIADA
TNRRLLGLPPTGDVRIDDAFANVHPEDRATIEASLRKASAANDDFEASFRVMLPDDSV
RHLKSFGRLISSSEPKRLVGAAIDMTPEYALAETRALMLREMNHRVKNLFAVVSGMIS
AAGRSHDDVRSYSEDLRERIAALGRAHSLAAPSGDQQSIPLRALIETTTAPYDGHARI
ELHGPDVSIERSCLSSLALILHEWTTNAAKYGALGSGNGALVVTWELGEEGLDLNWTE
RSQGSVEIPEGSGFGTLLVTTSARQLKAELSREVNDDSYRLRIQLPPKVMLA"
misc_feature 259829..260368
/locus_tag="PP1Y_Mpl2632"
/note="CheB methylesterase; Region: CheB_methylest;
pfam01339"
/db_xref="CDD:144802"
misc_feature 260420..261214
/locus_tag="PP1Y_Mpl2632"
/note="Methylase of chemotaxis methyl-accepting proteins
[Cell motility and secretion / Signal transduction
mechanisms]; Region: CheR; COG1352"
/db_xref="CDD:31543"
misc_feature 260435..260584
/locus_tag="PP1Y_Mpl2632"
/note="CheR methyltransferase, all-alpha domain; Region:
CheR_N; pfam03705"
/db_xref="CDD:202731"
misc_feature 260615..261172
/locus_tag="PP1Y_Mpl2632"
/note="CheR methyltransferase, SAM binding domain; Region:
CheR; pfam01739"
/db_xref="CDD:201947"
misc_feature 261911..262231
/locus_tag="PP1Y_Mpl2632"
/note="PAS domain; Region: PAS_10; pfam13596"
/db_xref="CDD:205774"
misc_feature 262307..262603
/locus_tag="PP1Y_Mpl2632"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cl02459"
/db_xref="CDD:207601"
misc_feature order(262346..262348,262358..262360,262376..262378,
262418..262429,262505..262507,262520..262522)
/locus_tag="PP1Y_Mpl2632"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(262409..262411,262421..262423,262445..262447,
262454..262459,262541..262543,262547..262549)
/locus_tag="PP1Y_Mpl2632"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 262577..263194
/locus_tag="PP1Y_Mpl2632"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG3920"
/db_xref="CDD:33706"
misc_feature 262649..262894
/locus_tag="PP1Y_Mpl2632"
/note="HWE histidine kinase; Region: HWE_HK; smart00911"
/db_xref="CDD:197979"
gene 263206..263559
/locus_tag="PP1Y_Mpl2659"
/db_xref="GeneID:10718102"
CDS 263206..263559
/locus_tag="PP1Y_Mpl2659"
/inference="protein motif:COG:COG0784"
/inference="similar to AA sequence:UniProt:A3K7K0"
/note="KEGG: gbe:GbCGDNIH1_1134"
/codon_start=1
/transl_table=11
/product="response regulator receiver domain-containing
protein"
/protein_id="YP_004538182.1"
/db_xref="GI:334144973"
/db_xref="GeneID:10718102"
/translation="MTRSVLIAEDELIVALDLEAIVEEAGFAVSRTCESLSCTQEALD
HGMPACAILDVRLVDGEVYPAADRLHAAGVPIIFHSGHADEAQLRDRYPDAQFCPKPS
SPWSLRDALQRALAG"
misc_feature 263218..263541
/locus_tag="PP1Y_Mpl2659"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 263221..263550
/locus_tag="PP1Y_Mpl2659"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(263230..263235,263365..263367,263389..263391,
263443..263445,263494..263496,263503..263508)
/locus_tag="PP1Y_Mpl2659"
/note="active site"
/db_xref="CDD:29071"
misc_feature 263365..263367
/locus_tag="PP1Y_Mpl2659"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(263374..263379,263383..263391)
/locus_tag="PP1Y_Mpl2659"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 263503..263511
/locus_tag="PP1Y_Mpl2659"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(263868..264692)
/locus_tag="PP1Y_Mpl2667"
/db_xref="GeneID:10718103"
CDS complement(263868..264692)
/locus_tag="PP1Y_Mpl2667"
/inference="protein motif:COG:COG5031"
/inference="similar to AA sequence:UniProt:A4XEX6"
/note="KEGG: nar:Saro_3628"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538183.1"
/db_xref="GI:334144974"
/db_xref="GeneID:10718103"
/translation="MQTNDDIPYLLRGIKGIATQSSVLVSSSPYLNEPRLRDWIATSF
LRRSGKDRPTSADSYELHRILRDVLDLDLIETLFSEQRLKWPELDKWFAEGFSSTFGV
KDLLAHPEGSLGHTFGKYLTDNGFEIDIVPRFEPRSQFEYYALRSGQTHDLEHIVTGG
NFDILGELVPYFARLSNVPRFLDPALAGPVNAGQLLGALRLLSRTGLHYQQSFLAALA
AAQAGMRVGEQSQPIFMMKYEDVFHLPIVEAREALGIRAVFPVDTSEASLAWEEYR"
misc_feature complement(263913..>264428)
/locus_tag="PP1Y_Mpl2667"
/note="Coenzyme Q (ubiquinone) biosynthesis protein Coq4;
Region: Coq4; cl02093"
/db_xref="CDD:194241"
gene complement(264734..266608)
/locus_tag="PP1Y_Mpl2678"
/db_xref="GeneID:10718104"
CDS complement(264734..266608)
/locus_tag="PP1Y_Mpl2678"
/inference="similar to AA sequence:UniProt:A4XEX5"
/note="KEGG: nar:Saro_3627"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538184.1"
/db_xref="GI:334144975"
/db_xref="GeneID:10718104"
/translation="MFLHIGRQGSSSCLSGADRVAQEHGKKVVKIGGAAGALNDSLIA
VPQLLRVPDIDYLAFDYLGEGAMGLMRRLKEANPRSGFLTDFVDLHIGPYLAELKARG
IKVISNAGGLNPGELAELIRRKGRELGLDIKVAAVSGDDIEGLVSELRDEGVCEMFSG
EPFPQAAIGSVNAYLGAFPIAAALDAGADIVITGRVVDSALILGPLIHEFGWANDAFD
LLAAGSLAGHLLECGAQVTGGTFTDWKDVPDWANIGFPVGECHSDGTCIITKPEDTGG
LVSVGTVAEQLLYEVSDPRTYFLPDVVCDFADVRIEQIGENRVRVSGAKGRPPTAQYK
ACATYDAGWRSVALIPIAGIDAVAKARRTADALLERTSNILKGRSQPDWRMTHVEVIG
TEVSYGEMARPLNPREVLLKIVVDHEDVAAAAMFGREQSTAIMNMAVGTSIAPIVAAP
RAVPLTEMFLFLIDKDRVRPCVKIEGREIPLRFPDLAGFDPQCLPQMEAFDAPKDGHT
PVPLVRLAWARSGDKGRLFNVGVIARRPEYLPYIRACLSAEAVARWYREQFDDPARAR
VDVYLAPGCEALNLVVHDAQGGGINMSPRFDAAAKTMGQFLLEMPVMVPASLARSLSA
"
misc_feature complement(265433..266497)
/locus_tag="PP1Y_Mpl2678"
/note="Protein of unknown function (DUF1446); Region:
DUF1446; pfam07287"
/db_xref="CDD:203607"
gene 266642..267526
/locus_tag="PP1Y_Mpl2698"
/db_xref="GeneID:10718105"
CDS 266642..267526
/locus_tag="PP1Y_Mpl2698"
/inference="protein motif:COG:COG1396"
/inference="similar to AA sequence:UniProt:B5ZPD9"
/note="KEGG: rlt:Rleg2_3280"
/codon_start=1
/transl_table=11
/product="helix-turn-helix domain-containing protein"
/protein_id="YP_004538185.1"
/db_xref="GI:334144976"
/db_xref="GeneID:10718105"
/translation="MTQSDSLIHPQPDDAASWRRRELATFLRSRRARLSPASQGIPEG
GRRRTSGLRREEVAMLLGVSVSWYTKLEQGLDVTASPRLLGKIADVLALTSVERTQLM
HLGLEDQGAVAVQAVDEILVSAQMIVDAMHYSPAFVLSPRADYVACNRAARAFFGNFE
DFAGNGNQLISLFLDKAVREVLPDWMESARSQVAMFRAAFARNMHDPDLQALVMQLLE
GSEEFRDLWERYELPSGTSRDLNYLLPSGQQCHFRHFTFFADMSGEFRVEVFNPIGEA
TLQWMISIVSAKEASAHG"
misc_feature 266777..266923
/locus_tag="PP1Y_Mpl2698"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature 266780..>266923
/locus_tag="PP1Y_Mpl2698"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:31586"
misc_feature order(266780..266782,266855..266857)
/locus_tag="PP1Y_Mpl2698"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(266783..266785,266858..266860)
/locus_tag="PP1Y_Mpl2698"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(266801..266806,266837..266839,266846..266848,
266858..266863)
/locus_tag="PP1Y_Mpl2698"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene complement(267867..270377)
/locus_tag="PP1Y_Mpl2713"
/db_xref="GeneID:10718106"
CDS complement(267867..270377)
/locus_tag="PP1Y_Mpl2713"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:A4XEX7"
/note="KEGG: nar:Saro_3629"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor, plug"
/protein_id="YP_004538186.1"
/db_xref="GI:334144977"
/db_xref="GeneID:10718106"
/translation="MKDLSRIYVVGCSTLAFATCIVAGPALAQSGPDRTSGEEQFADR
SGSAIQEIIVTAQKRTENLQKVPVAVTAITSAEIKNARIENIADLRSIAPNLYVVTQP
GGSSIPTTVIRGQVSGASSNPTVDNGISYYIDGVYLGSLSGIIFDIADIERIEVIRGP
AGTLFGTNSTGGAINYITSGPRGTFGITEDAGYSRFGSFRTKTRLDLPEWHGLSASIS
YLHNERRSNVSNFDRITLDYSNETSGRVGELTSVRHLNESVTNAVHAAVRWQPADDLT
IDYKFDWSRQKFTPPPVYLLGFPDTPGGIGAYQLVASQIYFGGAPLDEYIQTRRGRIA
FNNNTAPSTTRTRSHLIVATYKANEHVTIKNTTSWRNLDRNAFTSNLDGAGAVIGPIA
YAPDGTPTAFAPFALLSVRCCNQLRQFSNELQFSIETQPVTATGGLFIYNRRTPPDTN
PFGLILVDAFQPFPDNSHPGDPITDFDRSFFFKVRQVAGYGQVTYHATDTLDVTGGIR
YTQDDKTFFDTSAGEPGANFNYSKGNFSYLANITYKPNPDLLLYAKYVTSFIAGGSSP
GPLAIDSVTGQVFQGAAIPYKEERAYSFEGGVKAEWFDRRLRTNLALFHVRYTNQQTA
IFSAEGCITSPSGTCEPITSSAFTTNFGKSRAYGAELEITAVPVDHLTLSASGSYTSF
KFLEIDPAVLANAAVSRVQDYPKSLRPEFMSNVSAEYVVPFAGDTRMSVRVDGAYRSR
IVVSSGLVSDAGFVAAGIAYDNGYINDMNTQKALLTLNARVSVMDIPVGPTTATVSLW
GRNLTNKQQLNFNANTGITATGMFDDPVTYGVDLSVKL"
misc_feature complement(267873..270302)
/locus_tag="PP1Y_Mpl2713"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature complement(267873..270170)
/locus_tag="PP1Y_Mpl2713"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene complement(270662..271540)
/locus_tag="PP1Y_Mpl2737"
/db_xref="GeneID:10718108"
CDS complement(270662..271540)
/locus_tag="PP1Y_Mpl2737"
/inference="protein motif:COG:COG5031"
/inference="similar to AA sequence:UniProt:A4XEX8"
/note="KEGG: nar:Saro_3630"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538187.1"
/db_xref="GI:334144978"
/db_xref="GeneID:10718108"
/translation="MNEAQIGDADRAYFNGAIKQVTTESSVLVSSSRYLNHAGLRALI
AQEMLRRNGPDLPNTAYIPEVAQILHDLEDMPRIIELFEIEKARLPQFREWLEGRSLS
DFTIAELEGCASGTLGAAIRDFMVNSGYQLDLFFQEVKVVNDFTFYLRQTALTHDIEH
IVTGFGPNHGGELALLSANMHAKSRYFHPELSAFFSRIQYYLKAKTVMKDGLHYPEAM
VVHLEAEFRGAEQGRNWKFPLMLVDWRAYVDWQIADIRSEFGITPVEDGLWLETNRLC
NEDDPNYGVPLMEAAE"
misc_feature complement(270755..271444)
/locus_tag="PP1Y_Mpl2737"
/note="Coenzyme Q (ubiquinone) biosynthesis protein Coq4;
Region: Coq4; cl02093"
/db_xref="CDD:194241"
gene complement(271614..273359)
/locus_tag="PP1Y_Mpl2744"
/db_xref="GeneID:10718109"
CDS complement(271614..273359)
/locus_tag="PP1Y_Mpl2744"
/inference="protein motif:COG:COG3653"
/inference="similar to AA sequence:UniProt:A5VBP9"
/note="KEGG: nar:Saro_3631"
/codon_start=1
/transl_table=11
/product="amidohydrolase 3"
/protein_id="YP_004538188.1"
/db_xref="GI:334144979"
/db_xref="GeneID:10718109"
/translation="MENILIKNGTVVDGTGASAFKADVRVNGGAIAEVGADLEARGER
IVDATDCYVTPGFIESHTHYDGTMWWQPDLDPLPGYGATTMILGNCGFSTAPLHKYMP
AQREMIGIFSFFEDIPEGPFMQNLPWDWHKWSEYRASVERNVTVPLNYAAYVGHIAIR
LAAMGVEAWDREATPEEIAHMCELLDDALAAGALGMSDNLHDHDGQDRPVPTLKASDA
EFAALFDVMEKYPNSCYQVIVDTFMRMTGPADLERLAKLLGGRKIRCQIAGAVPTLEF
QKGILPAMQESLRKMREADVDVWPGFAHVSPTNVLSLVKSLIFAQSNDFVWHEVVMED
DHHKKAELLADPEWRARARASWDEKAWDHSPLKNPQELHLIDSENGAGPLNITLKEYA
DSLGLHRSDAMADWIIKNGTRSTVHMAPFPKDEALTIELMRDPKTVGNISDAGAHLQM
LCGGGENALLLTQYVREEGSLTIEEAVHVMTGKLAGHFNLSDRGVIAPGKRADIAVFN
LAEIERQEMEKANDVPDGRGGTTWRFTRKAMPTRLTLVNGVPTFENGAFTGAMPGEFL
SPSYAPVEQMAVAAE"
misc_feature complement(271662..273353)
/locus_tag="PP1Y_Mpl2744"
/note="N-acyl-D-aspartate/D-glutamate deacylase [Secondary
metabolites biosynthesis, transport, and catabolism];
Region: COG3653"
/db_xref="CDD:33451"
misc_feature complement(<272421..273350)
/locus_tag="PP1Y_Mpl2744"
/note="D-aminoacylases (N-acyl-D-Amino acid
amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino
acids to produce the corresponding D-amino acids, which
are used as intermediates in the synthesis of pesticides,
bioactive peptides, and antibiotics; Region:
D-aminoacylase; cd01297"
/db_xref="CDD:73255"
misc_feature complement(order(272559..272561,272646..272648,
273090..273092,273171..273173,273177..273179))
/locus_tag="PP1Y_Mpl2744"
/note="active site"
/db_xref="CDD:73255"
misc_feature complement(order(272424..272426,272442..272444,
272553..272555))
/locus_tag="PP1Y_Mpl2744"
/note="putative substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:73255"
misc_feature complement(271668..>272270)
/locus_tag="PP1Y_Mpl2744"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have a...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:206955"
gene 273528..274256
/locus_tag="PP1Y_Mpl2761"
/db_xref="GeneID:10718110"
CDS 273528..274256
/locus_tag="PP1Y_Mpl2761"
/inference="protein motif:COG:COG1396"
/inference="similar to AA sequence:UniProt:A4XEY0"
/note="KEGG: nar:Saro_3632"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538189.1"
/db_xref="GI:334144980"
/db_xref="GeneID:10718110"
/translation="MLGVLRRHLRHDGWTAPRLAAHFGIGEATAKRWIVGKGLTLERL
EQMAGLCGMTISELAREAEHARSGMKRELTLAQERALSTDVFLSFLFMTILAGATPQE
LIDDFELKRPVLDAALGKLERLALIDRLRGDRVRPLVDRALIFRKLPMRALFDKYVKH
QFMEMDFAAPEAVYTAEMLKLSDAGAGQLAELMERLRRDAQVLGDHDREESLRPRRWM
MMMCAIRPFDASGVADSAADFSGN"
gene complement(274253..274630)
/locus_tag="PP1Y_Mpl2769"
/db_xref="GeneID:10718111"
CDS complement(274253..274630)
/locus_tag="PP1Y_Mpl2769"
/inference="protein motif:COG:COG2050"
/inference="similar to AA sequence:UniProt:A5V2F5"
/note="KEGG: swi:Swit_0099"
/codon_start=1
/transl_table=11
/product="thioesterase superfamily protein"
/protein_id="YP_004538190.1"
/db_xref="GI:334144981"
/db_xref="GeneID:10718111"
/translation="MIAGTPYAKLLGVREITGDDETIVLLLPADPKLEGRQGFLYGGV
IGSLLELACLDAIGRELGDPERRPKPINMTFDFLRGGLMVDTFAQARLVRIGRQVVNA
DATCWQADRDRPIATGRMHLLLD"
misc_feature complement(274259..274603)
/locus_tag="PP1Y_Mpl2769"
/note="PaaI_thioesterase is a tetrameric acyl-CoA
thioesterase with a hot dog fold and one of several
proteins responsible for phenylacetic acid (PA)
degradation in bacteria. Although orthologs of PaaI exist
in archaea and eukaryotes, their function has not...;
Region: PaaI_thioesterase; cd03443"
/db_xref="CDD:48038"
misc_feature complement(order(274391..274402,274421..274423,
274511..274513))
/locus_tag="PP1Y_Mpl2769"
/note="CoenzymeA binding site [chemical binding]; other
site"
/db_xref="CDD:48038"
misc_feature complement(order(274400..274402,274406..274420,
274493..274495,274502..274504,274508..274510))
/locus_tag="PP1Y_Mpl2769"
/note="subunit interaction site [polypeptide binding];
other site"
/db_xref="CDD:48038"
misc_feature complement(order(274421..274423,274466..274471,
274478..274483,274505..274507))
/locus_tag="PP1Y_Mpl2769"
/note="PHB binding site; other site"
/db_xref="CDD:48038"
gene complement(274627..275055)
/locus_tag="PP1Y_Mpl2773"
/db_xref="GeneID:10718112"
CDS complement(274627..275055)
/locus_tag="PP1Y_Mpl2773"
/inference="protein motif:COG:COG2050"
/inference="similar to AA sequence:UniProt:A5V2F6"
/note="KEGG: swi:Swit_0100"
/codon_start=1
/transl_table=11
/product="thioesterase superfamily protein"
/protein_id="YP_004538191.1"
/db_xref="GI:334144982"
/db_xref="GeneID:10718112"
/translation="MKGEDDPFERLKNLPPRGHHALLGIYNVDDGPDWAELACPFAPG
FLMDAGAGLVSSGPVVSLIDAATGAAIIARTRQWRPMATLDLRVDYLRSARAGSTLHA
RAACYHVTRKVAFTRCDVHDGDAGDPVAHATATFFFTGDA"
misc_feature complement(274645..274992)
/locus_tag="PP1Y_Mpl2773"
/note="PaaI_thioesterase is a tetrameric acyl-CoA
thioesterase with a hot dog fold and one of several
proteins responsible for phenylacetic acid (PA)
degradation in bacteria. Although orthologs of PaaI exist
in archaea and eukaryotes, their function has not...;
Region: PaaI_thioesterase; cd03443"
/db_xref="CDD:48038"
misc_feature complement(order(274777..274788,274807..274809,
274894..274896))
/locus_tag="PP1Y_Mpl2773"
/note="CoenzymeA binding site [chemical binding]; other
site"
/db_xref="CDD:48038"
misc_feature complement(order(274786..274788,274792..274806,
274876..274878,274885..274887,274891..274893))
/locus_tag="PP1Y_Mpl2773"
/note="subunit interaction site [polypeptide binding];
other site"
/db_xref="CDD:48038"
misc_feature complement(order(274807..274809,274849..274854,
274861..274866,274888..274890))
/locus_tag="PP1Y_Mpl2773"
/note="PHB binding site; other site"
/db_xref="CDD:48038"
gene complement(275062..276240)
/locus_tag="PP1Y_Mpl2779"
/db_xref="GeneID:10718113"
CDS complement(275062..276240)
/locus_tag="PP1Y_Mpl2779"
/inference="protein motif:COG:COG1960"
/inference="similar to AA sequence:UniProt:Q0S7V4"
/note="KEGG: nar:Saro_3606"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase domain-containing
protein"
/protein_id="YP_004538192.1"
/db_xref="GI:334144983"
/db_xref="GeneID:10718113"
/translation="MKLGFSVDDELFRQECADWLNGQMAGEFKDIKGVTKLTGSPERR
KEWEQQLAAHRWSCIGWPEKWGGRNATLAQQVIFAEEYARAGVPGRVNHIGIELAGPT
ILTFGTDEQKQRFLPGIAAGKTIFCQGFSEPNAGSDLASVRTKARLEDGEWVVNGQKI
WTSLAHISDWIFVVTRTEEGSQGPKGLTFLMMPVDQEGIEIRGIRQINGDAEFNETFF
TDARCPADSLIGAVGDGWKIAMGLLSFERGVSTLGQQMGFRYELDEIVAAAKANGAAR
DPLIRQRIAKAEIGLRLMRYGALRMLSNTDHSRMDGAALTYKIQWASWRRSLGELAMD
VLGQAGEISDHPDYEWDTLPNLFLFSRADTIYGGTNQIQRNLIAERGLGLPREPRWTA
"
misc_feature complement(275089..276234)
/locus_tag="PP1Y_Mpl2779"
/note="pimeloyl-CoA dehydrogenase, large subunit; Region:
pimC_large; TIGR03204"
/db_xref="CDD:132248"
misc_feature complement(275092..276219)
/locus_tag="PP1Y_Mpl2779"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:209100"
misc_feature complement(order(275128..275130,275134..275136,
275140..275148,275752..275754,275758..275760,
275851..275853,275857..275859,275947..275949))
/locus_tag="PP1Y_Mpl2779"
/note="active site"
/db_xref="CDD:173838"
gene complement(276237..277295)
/locus_tag="PP1Y_Mpl2790"
/db_xref="GeneID:10718114"
CDS complement(276237..277295)
/locus_tag="PP1Y_Mpl2790"
/inference="protein motif:COG:COG1960"
/inference="similar to AA sequence:UniProt:A5VCG2"
/note="KEGG: nar:Saro_3761"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase domain-containing
protein"
/protein_id="YP_004538193.1"
/db_xref="GI:334144984"
/db_xref="GeneID:10718114"
/translation="MEFAFTDEQHMIAETARAYFVENATSARTREAMAGDGIDRALWQ
GYCQELGFSGIAIPEDRGGSGLGLVELAIIAEAAGSQVAALPMLGSVVQAAQAIAAGG
SEAQRSAWIAGLLSGETIAAFVEDAGLKESEGRLTGTSRFVTHGGSAEVLVVSNGRRA
WIVRADTPGVSVDVPTSMDQTRPLASVRLDGAVGDPLADPAAALASSYRASLVAVAAE
ALGGAQECLDRTVAYSKERVQFGRPIGSFQAYKHRLADMMIEIEQARSAVYWAACAVD
EGSPDAELSLHAAKAFCTDTFFRCAGDMIQLHGGIGFTWEHDAHLFFKRARSLQSMLG
NGNWHRERIATMILGEAA"
misc_feature complement(276240..277295)
/locus_tag="PP1Y_Mpl2790"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:32143"
misc_feature complement(276249..277277)
/locus_tag="PP1Y_Mpl2790"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:209100"
misc_feature complement(order(276285..276287,276291..276293,
276297..276305,276864..276866,276870..276872,
276927..276929,277017..277019))
/locus_tag="PP1Y_Mpl2790"
/note="active site"
/db_xref="CDD:173838"
gene complement(277617..278093)
/locus_tag="PP1Y_Mpl2807"
/db_xref="GeneID:10718115"
CDS complement(277617..278093)
/locus_tag="PP1Y_Mpl2807"
/inference="protein motif:COG:COG1522"
/inference="similar to AA sequence:UniProt:A4XEW2"
/note="KEGG: nar:Saro_3613"
/codon_start=1
/transl_table=11
/product="AsnC family transcriptional regulator"
/protein_id="YP_004538194.1"
/db_xref="GI:334144985"
/db_xref="GeneID:10718115"
/translation="MSWPELDELDHRIIAILSQDARVSNRKIAADLDVNEGTIRGRLK
RLQNEGLIAFTALTSPRLDKGNNLAFVAVQADMLHFHQIARELKRIPTIHSIMTMLGP
FNIMTTCVYRDIEELHAVTVSQILAVEGVHHVETSIAVKTVKFTNGVVSVSAANSS"
misc_feature complement(277653..278093)
/locus_tag="PP1Y_Mpl2807"
/note="Transcriptional regulators [Transcription]; Region:
Lrp; COG1522"
/db_xref="CDD:31711"
misc_feature complement(277938..278078)
/locus_tag="PP1Y_Mpl2807"
/note="Winged helix-turn-helix DNA-binding; Region:
HTH_24; pfam13412"
/db_xref="CDD:205590"
misc_feature complement(277668..277856)
/locus_tag="PP1Y_Mpl2807"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:189815"
gene complement(278090..278560)
/locus_tag="PP1Y_Mpl2810"
/db_xref="GeneID:10718116"
CDS complement(278090..278560)
/locus_tag="PP1Y_Mpl2810"
/inference="protein motif:COG:COG1522"
/inference="similar to AA sequence:UniProt:A4XEW3"
/note="KEGG: nar:Saro_3614"
/codon_start=1
/transl_table=11
/product="AsnC family transcriptional regulator"
/protein_id="YP_004538195.1"
/db_xref="GI:334144986"
/db_xref="GeneID:10718116"
/translation="MLEFDETDLRIVEQLRRNGRATHQQIAKSLDLVATTVSARIRRM
EESGMLRVVAVSDFAVHGYHVLIHVGVEVSGRAPAEVAEDLAGFDEVFAAYLVTGRYE
VSVLLALPNIEDLAQFIATKFSKVPGIRSITQSIGLDIVKYGLGANPVDVEGVL"
misc_feature complement(278132..278560)
/locus_tag="PP1Y_Mpl2810"
/note="Transcriptional regulators [Transcription]; Region:
Lrp; COG1522"
/db_xref="CDD:31711"
misc_feature complement(278408..278551)
/locus_tag="PP1Y_Mpl2810"
/note="Winged helix-turn-helix DNA-binding; Region:
HTH_24; pfam13412"
/db_xref="CDD:205590"
misc_feature complement(order(278405..278407,278423..278428,
278432..278437,278444..278449,278453..278464,
278489..278497,278537..278545))
/locus_tag="PP1Y_Mpl2810"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature complement(order(278486..278488,278495..278497))
/locus_tag="PP1Y_Mpl2810"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
misc_feature complement(278144..278356)
/locus_tag="PP1Y_Mpl2810"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:189815"
gene complement(278694..279374)
/locus_tag="PP1Y_Mpl2814"
/db_xref="GeneID:10718117"
CDS complement(278694..279374)
/locus_tag="PP1Y_Mpl2814"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A8LBK1"
/note="KEGG: fre:Franean1_1609"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538196.1"
/db_xref="GI:334144987"
/db_xref="GeneID:10718117"
/translation="MGEGASIVIGDIEEEWAARTASAIREEGGKAIGVYLDGTKACSQ
ADIVAAALSEFGGLDFYHSNLAGGTQGDVDILDCPEEVLDRSFAINAKSHFLASQAAL
PVLIERGGGSMIYTSSGAASSGSAFQVAYPMTKNAIHALVRHVARKFGKQGIRANGIC
PGLVMTEAVAQHLTDEYVETMLETVPHTRLGKPDDIAGAVAFLASDDGEWVNGQVWHV
NGGGLFRD"
misc_feature complement(278712..279368)
/locus_tag="PP1Y_Mpl2814"
/note="3-oxoacyl-(acyl-carrier-protein) reductase; Region:
3oxo_ACP_reduc; TIGR01830"
/db_xref="CDD:162551"
misc_feature complement(278718..279368)
/locus_tag="PP1Y_Mpl2814"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(278874..278879,278883..278894,
278970..278972,278982..278984,279021..279029,
279108..279110,279171..279176,279183..279185,
279261..279269,279336..279344))
/locus_tag="PP1Y_Mpl2814"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(278970..278972,278982..278984,
279021..279023,279105..279107))
/locus_tag="PP1Y_Mpl2814"
/note="active site"
/db_xref="CDD:212491"
gene complement(279495..281018)
/locus_tag="PP1Y_Mpl2820"
/db_xref="GeneID:10718118"
CDS complement(279495..281018)
/locus_tag="PP1Y_Mpl2820"
/inference="protein motif:COG:COG0154"
/inference="similar to AA sequence:UniProt:A4XEV1"
/note="KEGG: nar:Saro_3602"
/codon_start=1
/transl_table=11
/product="amidase"
/protein_id="YP_004538197.1"
/db_xref="GI:334144988"
/db_xref="GeneID:10718118"
/translation="MAGDGTGVTRREMVSGAVAFAGMAAMPGLAAAKGGDPLDTHDAL
GLAELVRKRQVSASELLDAAIGRAEALNPRFNFMAQKHYDYGRKAIAAGLPEGPFRGV
PWLLKDLNTYIAGLPTENGSRFYRGYRPEVTSELVKRIEKAGFVIFGKTCVPEMGLTG
TTENKLTGDTRNPWNPAHIAGGSSGGAAVAVASGVLPAAHATDGGGSIRIPASCCGLF
GLKPSRGRVPMGPPRTEGWGGLSVHHAVTRSVRDSAAILDATQGPEPGSRYSAPTPSE
SFLSQVGKAPGKLRIALMLDAPAGSPVDPECIEAARKAARLCESLGHHVEEAAPKLDM
AAMGAASFVLIASNVAADMLDRAKATGIPIGPEVLEAITLAFVAYGQRTTGMDFARAN
NTLQAAALTMARFMADYDVILSPTLAAPPLELGRINLSPGVDFEQWGARTAAFSPFTQ
IENMTGQPAMSMPLAMSSSGLPVGVMFVGRYGDEALLFRLAGQIEASVPWKDRRPAL"
misc_feature complement(279519..280913)
/locus_tag="PP1Y_Mpl2820"
/note="amidase; Provisional; Region: PRK07869"
/db_xref="CDD:181154"
misc_feature complement(279558..280844)
/locus_tag="PP1Y_Mpl2820"
/note="Amidase; Region: Amidase; cl11426"
/db_xref="CDD:212316"
gene complement(281030..282115)
/locus_tag="PP1Y_Mpl2839"
/db_xref="GeneID:10718119"
CDS complement(281030..282115)
/locus_tag="PP1Y_Mpl2839"
/inference="protein motif:COG:COG4638"
/inference="similar to AA sequence:UniProt:A4XEV0"
/note="KEGG: nar:Saro_3601"
/codon_start=1
/transl_table=11
/product="Rieske (2Fe-2S) domain-containing protein"
/protein_id="YP_004538198.1"
/db_xref="GI:334144989"
/db_xref="GeneID:10718119"
/translation="MTPTDVITATDARTPPVAVWQILEKLRGQDLIDWRLAEVKDRAS
VEERNLDNGIPFGWYPIDLSANLAVGEVKPLRYFAKDLAMWRGEDGEVRIVDAYCRHL
GAHMGHGGKVNGNLLECPFHAWRYDGNEGVVKEIPYARVIPPQVKRKCIRTWNVVEVN
RWIWAWYHPQGIDPLWEVAVLPEATDPEWTDYEVHEWNVWGSIQNMAENGVDFAHFKY
IHGTANVPEGDLRWGDWGRGADVRAKMGTPMGEVDGLISYDTMGPGQSWTRFTGISET
LLVACLTPVDQDHVHARFCFTQPKTQAEGPMGRLAKGLIRDICKQFDQDKVVWDRQKF
EPNPIICDGDGPIPQFRKFYSRFYAQG"
misc_feature complement(<281372..281947)
/locus_tag="PP1Y_Mpl2839"
/note="Phenylpropionate dioxygenase and related
ring-hydroxylating dioxygenases, large terminal subunit
[Inorganic ion transport and metabolism / General function
prediction only]; Region: HcaE; COG4638"
/db_xref="CDD:34257"
misc_feature complement(281594..281947)
/locus_tag="PP1Y_Mpl2839"
/note="Rieske domain; a [2Fe-2S] cluster binding domain
commonly found in Rieske non-heme iron oxygenase (RO)
systems such as naphthalene and biphenyl dioxygenases, as
well as in plant/cyanobacterial chloroplast b6f and
mitochondrial cytochrome bc(1) complexes; Region: Rieske;
cl00938"
/db_xref="CDD:207253"
misc_feature complement(order(281738..281740,281744..281746,
281750..281755,281759..281761,281810..281815,
281819..281821))
/locus_tag="PP1Y_Mpl2839"
/note="iron-sulfur cluster [ion binding]; other site"
/db_xref="CDD:58538"
misc_feature complement(order(281744..281746,281750..281752,
281759..281761,281810..281815,281819..281821))
/locus_tag="PP1Y_Mpl2839"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:58538"
gene complement(282249..283103)
/locus_tag="PP1Y_Mpl2853"
/db_xref="GeneID:10718121"
CDS complement(282249..283103)
/locus_tag="PP1Y_Mpl2853"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XEU9"
/note="KEGG: nar:Saro_3600"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538199.1"
/db_xref="GI:334144990"
/db_xref="GeneID:10718121"
/translation="MSRSGVLDSRVAIVTGASRGIGAAIARRFAAEGARVAIVARTAE
PDAALAGSLAETAAMIEAAGGQALVIRADLADPVDRARIVPETVARFGRLDILVNNAA
WARFVPIWEAEPRHVDLSLQLNVRAPQELSQQALPHMRTCGAGWILNISSAAADLPPA
APYDSENRYVAFNRDGHATLYGLGKAALDRLTGGWAVELSREAIAVNAMAPVGAVASE
GALAVGGWDEHDHIEPVEAMAEAALQLCHRPASELSGQVVRSLHLLERLGVPVRGLDG
LPLEARAQ"
misc_feature complement(282315..283085)
/locus_tag="PP1Y_Mpl2853"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(282330..283085)
/locus_tag="PP1Y_Mpl2853"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(order(282462..282473,282549..282551,
282561..282563,282648..282656,282798..282806,
282978..282986,283041..283043,283047..283052,
283056..283058))
/locus_tag="PP1Y_Mpl2853"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(282549..282551,282561..282563,
282648..282650,282732..282734))
/locus_tag="PP1Y_Mpl2853"
/note="active site"
/db_xref="CDD:187535"
gene complement(283100..283966)
/locus_tag="PP1Y_Mpl2863"
/db_xref="GeneID:10718122"
CDS complement(283100..283966)
/locus_tag="PP1Y_Mpl2863"
/inference="protein motif:COG:COG2159"
/inference="similar to AA sequence:UniProt:A4XEU8"
/note="KEGG: nar:Saro_3599"
/codon_start=1
/transl_table=11
/product="amidohydrolase 2"
/protein_id="YP_004538200.1"
/db_xref="GI:334144991"
/db_xref="GeneID:10718122"
/translation="MGMPGDIKIIDCMLGIPDAEDRSEWFAPFRPLIKDRQTLDQFAM
PAQYMFKDIPQTGKVDDFVAWTVEQMDRHNVERALVGWNDNATSYRAKEMFGDRFFFD
LPIDPNRGMEEVRRIKRIHAEVGLSAISCFPAGTLPQVAINHKYMFPIYACAEELGLP
VLLNAGIPGPRIPMETQKVEHLDEVCWYFPDLKVVMRHGAEPWEALAVKLMLKWPNLY
YSTSAFAPKHYPKAIIDYANTRGADKIIYAGYFPMGLSLDRIFSDMQNVPFKDEVWPK
FLRENAMKVFGL"
misc_feature complement(283103..283804)
/locus_tag="PP1Y_Mpl2863"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have a...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:206955"
gene complement(283982..285631)
/locus_tag="PP1Y_Mpl2874"
/db_xref="GeneID:10718123"
CDS complement(283982..285631)
/locus_tag="PP1Y_Mpl2874"
/inference="protein motif:COG:COG0318"
/inference="similar to AA sequence:UniProt:A4XEU7"
/note="KEGG: nar:Saro_3598"
/codon_start=1
/transl_table=11
/product="AMP-dependent synthetase and ligase"
/protein_id="YP_004538201.1"
/db_xref="GI:334144992"
/db_xref="GeneID:10718123"
/translation="MSRVDPVFAAVTAPGTPFEIGEREGLRTFVNAPSDLNELIESAR
RFGERTFIVDFDGPQGERRLSYAEVFAWRDRLACHLGIARGDRVAICMRNRAEWIVAF
LAVIRAGGIAAMLNSRGSAAELVAMIDDVTPALVIADSERAALIREGGYRGRLLDQTE
PLEDTDALPDDNARAAPHDPCAILFTSGTTGRVKGAVLSHRSLITGLLGTQLTGTMVL
HNMAQQYGIAVDTMMQQVPPQAILLVSPLFHISGLGSGFLAPMLSGGKVVIMRRWDAE
EAVGLIAREKVTQLSTVPTMLWDMVHKAHLTEADLSSLRNIGSGGQALPLNLLEETRK
LCPHAVIGVGYGMTETSGAIAQAVGEDFLRARASAGRVLPLVDLRVVHADGSECGANE
SGEIMVRSAMVMNGYWNRPEDTAKALTPDGWLHTGDIGYQDQDGYIFIVDRAKDMVIS
GGENIYCAEVERVLCELPEITECATFGVPDERLGERLVAVVQADGLDEGAVIDWVADR
LARYKAPARVVFSARPLPRNAAQKIDKIALRALWPQLASED"
misc_feature complement(284012..285517)
/locus_tag="PP1Y_Mpl2874"
/note="long-chain-fatty-acid--CoA ligase; Validated;
Region: PRK06187"
/db_xref="CDD:180453"
misc_feature complement(284210..285439)
/locus_tag="PP1Y_Mpl2874"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
gene 286012..286785
/locus_tag="PP1Y_Mpl2892"
/db_xref="GeneID:10718124"
CDS 286012..286785
/locus_tag="PP1Y_Mpl2892"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XEV6"
/note="KEGG: nar:Saro_3607"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538202.1"
/db_xref="GI:334144993"
/db_xref="GeneID:10718124"
/translation="MIRDFEGQVAIVTGGSDGIGLATASLLARRGAQVVICGRRQEML
DSARAHIDAQGGKVDTIRLDVADDAALTAMIADTARKYGRLDMLVNNAMSTHYAPIGK
LTLDQWRKDFAVNADAVFVSTKAAMKVMAAAGKGSIVNISSTCGIRAAANMSSYSASK
AALIHFTAVAAIEGARQGIRVNAIVPGQVQTAGTEEFSARAPEIAAKTADAIPMGRGG
RPDELARAIVFMLSDDASYITGTALPVDGGKAAQLYMPS"
misc_feature 286021..286755
/locus_tag="PP1Y_Mpl2892"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature 286039..286749
/locus_tag="PP1Y_Mpl2892"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(286051..286053,286057..286068,286123..286131,
286198..286206,286282..286290,286351..286353,
286432..286440,286477..286479,286489..286491,
286567..286578,286582..286587)
/locus_tag="PP1Y_Mpl2892"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(286354..286356,286438..286440,286477..286479,
286489..286491)
/locus_tag="PP1Y_Mpl2892"
/note="active site"
/db_xref="CDD:212491"
gene 286916..289462
/locus_tag="PP1Y_Mpl2902"
/db_xref="GeneID:10718125"
CDS 286916..289462
/locus_tag="PP1Y_Mpl2902"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:A4XEY5"
/note="KEGG: nar:Saro_3637"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538203.1"
/db_xref="GI:334144994"
/db_xref="GeneID:10718125"
/translation="MHRRQAFAAFHLLLGASSFALADYAMAQETSNSPQAPALGEIVV
TAQKRAQNLQDVPIAISAISAEKVEQLGIKDSRDLSGLAPNVTIVPGTTSNSAAVFSM
RGISNGGSESFGVDAANGLYVDGVYIARAGAMGLDVMDIERVEVLRGPQGTLFGRNTT
GGAVHFISRAPSSTFRLKAEAGYGNFNAWNGKVVVDPGEIAGVATSFSYSHSERDGFV
DNILQPSDSRDPGARKSDALRAAARIELGGSGSFQYAFDWSRINGTPQAFQLTNVADG
TYRDPIIVDGQPVVATQQAPVAQYLAAATFADPDCAALAEPARQYRKKVCNNILSRAL
DKSWGHNIQVQNDFGGFKVKSTTGYRFWHSDTLADLDGIGAFTGPAFSNATLFNGMPE
ALLQYIPSIPAAARPFIAASAVPTITQDLFDTNNRRRHKQFSQEIEVSGDTSTLDWVV
GGFYFWEKGSEDGYQNSGYVLDTNSIFLGNFGALGPSFVAANPAQYRLVQTLARLSYT
ARSESKALYGQFTFYPGGRGSGIRLTAGGRYTWDQKAMIRFQNGADPLPVPETGEASF
KKFTWNLMAGYDVAQGVNLYARAATGYRSGGFNSQDPVITGTTQLPNFKPENVASYEV
GLKSELFGRRLRLNLAAYHNIYKDLAINVPRTDAPIGTFATRIGNAGKVTYTGFEVET
QAIINDNFSIDGNLGYVDIKYKEFLAGQSTTAGAPPVNIASIVTPGYTSPLTANVALN
AQFPLNWGNATIRGRVGYTHEDGKYSFTSVTSSPFNEAIKGDNRDIIDAQIGIDGMPI
GGGEGSLRLWVRNVTNAKDFVRAVDFGQLGFAGGYYAEPRTYGLTLGISY"
misc_feature 287069..287404
/locus_tag="PP1Y_Mpl2902"
/note="TonB-dependent Receptor Plug Domain; Region: Plug;
pfam07715"
/db_xref="CDD:203737"
misc_feature <288434..289459
/locus_tag="PP1Y_Mpl2902"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene complement(289671..291206)
/locus_tag="PP1Y_Mpl2929"
/db_xref="GeneID:10718126"
CDS complement(289671..291206)
/locus_tag="PP1Y_Mpl2929"
/EC_number="6.2.1.-"
/inference="protein motif:COG:COG0318"
/inference="similar to AA sequence:UniProt:Q0K3I3"
/note="assigned by KAAS to KEGG Orthology:K00666
fatty-acyl-CoA synthase"
/codon_start=1
/transl_table=11
/product="fatty-acyl-CoA synthase"
/protein_id="YP_004538204.1"
/db_xref="GI:334144995"
/db_xref="GeneID:10718126"
/translation="MGTWPATIPGAAKAAAERWPDVPGLIVGERTWTFAEVWADARAA
ASAMLASGIRNGDRIAIWAPNTREWILAALGAQAVGATIVPMNTRFKGAEAGDILRRA
RVKILFAPGDFLGTDYAALIAGEDLPDLQEVVRLDQAWDSFIARGKGTQDPAVDAELA
KLTGEHICDIIFTSGTTGRPKGALTSHRQAVQIFGDWAVRVDLRAGDRYLIVNPFFHT
FGYKAGWAVCFTRGATIVPMPVFEVAETVRQIEQNRISFLPGPPTIYQSLLQELDGGK
PRDFSSLRVAVTGAAPVAPALVERMRSELGMSNIVNGYGMTECGAISMTCQGDDAETV
ANTCGKPLPGIEVRCVDDDGNDLSSGQPGELWIRGHAVMKGYLDDPLATREAIDADGW
LHSGDIGTIDDRGYLKITDRKKDMFISGGFNVYPVEVENLLAAHPAINMAAVVGVPDE
RMGEVGRAFVVLRPGSAVTEDELLRWARSNMANYKAPRSIRIMPDLPRNAAGKVLKTE
LRD"
misc_feature complement(289674..291194)
/locus_tag="PP1Y_Mpl2929"
/note="long-chain-fatty-acid--CoA ligase; Validated;
Region: PRK07656"
/db_xref="CDD:181068"
misc_feature complement(289875..291053)
/locus_tag="PP1Y_Mpl2929"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
misc_feature complement(289695..>290003)
/locus_tag="PP1Y_Mpl2929"
/note="AMP-binding enzyme; Region: AMP-binding; cl15778"
/db_xref="CDD:212383"
gene complement(291236..292438)
/locus_tag="PP1Y_Mpl2944"
/db_xref="GeneID:10718127"
CDS complement(291236..292438)
/locus_tag="PP1Y_Mpl2944"
/inference="protein motif:COG:COG0183"
/inference="similar to AA sequence:UniProt:A7HQD4"
/note="KEGG: nar:Saro_3766"
/codon_start=1
/transl_table=11
/product="acetyl-CoA acetyltransferase"
/protein_id="YP_004538205.1"
/db_xref="GI:334144996"
/db_xref="GeneID:10718127"
/translation="MREAAIISTARTGVGKAYRGAFNDTEAPRMAAHVVNAAIERAGI
DPARIDDVYMGCANQWNTQSYNIGRLAVHGSVLPDTTCGFALDRKCSSGLNALAFAAR
GIIAGEIDCALSGGTENVSLTLDKHYPSFRNRSEWVKEHDPYAYMAMIETAEIVADRY
GVSREAQDRFAALSQSRAAAAQEAGRFDDEIAPITVTKALFDKEGNETGKEEVTLTKD
EGIRAGTTFEKLQELKPVFRNGQVVKEGRHITAGNASQLSDGASAQVLMDHATAQKEG
LPILGLYRGFQVAGCGADEMGIGPVFAIPKLLERAGLKVDDIGIWEINEAFASQAIYC
QQQLGIDPEKLNVNGGGIAIGHPFGMTGSRLVGHALIEGKRRGVKYVVVSMCVAGGMG
AAGLFEVV"
misc_feature complement(291239..292438)
/locus_tag="PP1Y_Mpl2944"
/note="acetyl-CoA acetyltransferase; Provisional; Region:
PRK07108"
/db_xref="CDD:180843"
misc_feature complement(291242..292426)
/locus_tag="PP1Y_Mpl2944"
/note="Thiolase are ubiquitous enzymes that catalyze the
reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and...; Region: thiolase;
cd00751"
/db_xref="CDD:29411"
misc_feature complement(order(291269..291274,291509..291511,
291569..291571,291575..291577,291581..291583,
292076..292078,292121..292123,292130..292135,
292154..292156,292178..292189,292220..292222,
292232..292234,292241..292243,292286..292288,
292367..292369))
/locus_tag="PP1Y_Mpl2944"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29411"
misc_feature complement(order(291281..291283,291371..291373,
292169..292171))
/locus_tag="PP1Y_Mpl2944"
/note="active site"
/db_xref="CDD:29411"
gene complement(292453..292830)
/locus_tag="PP1Y_Mpl2956"
/db_xref="GeneID:10718129"
CDS complement(292453..292830)
/locus_tag="PP1Y_Mpl2956"
/EC_number="5.3.3.1"
/inference="similar to AA sequence:UniProt:A4XFB3"
/note="assigned by KAAS to KEGG Orthology:K01822 steroid
delta-isomerase"
/codon_start=1
/transl_table=11
/product="steroid delta-isomerase"
/protein_id="YP_004538206.1"
/db_xref="GI:334144997"
/db_xref="GeneID:10718129"
/translation="MPDPAKMEAAVHEYVAAFAEGNPERVAALFAGDATVEDPVGTPP
HVGREAIRAFYTQSMQTGAQLKLEGPVRVAADHAAFAFSVHLHWEGRDQRVDVIDTFR
FNENNEVIEMRAYFGPQNMHGFA"
misc_feature complement(292462..292824)
/locus_tag="PP1Y_Mpl2956"
/note="ketosteroid isomerase: Many biological reactions
proceed by enzymatic cleavage of a C-H bond adjacent to
carbonyl or a carboxyl group, leading to an enol or a
enolate intermediate that is subsequently re-protonated at
the same or an adjacent carbon; Region:
ketosteroid_isomerase; cd00781"
/db_xref="CDD:29631"
misc_feature complement(order(292480..292488,292525..292527,
292540..292545,292585..292587,292612..292614,
292615..292620,292627..292629,292711..292713,
292807..292809))
/locus_tag="PP1Y_Mpl2956"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29631"
misc_feature complement(order(292489..292491,292534..292536,
292666..292668,292717..292719,292789..292791))
/locus_tag="PP1Y_Mpl2956"
/note="active site/substrate binding site [active]"
/db_xref="CDD:29631"
gene complement(292830..293300)
/locus_tag="PP1Y_Mpl2960"
/db_xref="GeneID:10718130"
CDS complement(292830..293300)
/locus_tag="PP1Y_Mpl2960"
/inference="protein motif:COG:COG2030"
/inference="similar to AA sequence:UniProt:B0TTY1"
/note="KEGG: nar:Saro_3764"
/codon_start=1
/transl_table=11
/product="dehydratase"
/protein_id="YP_004538207.1"
/db_xref="GI:334144998"
/db_xref="GeneID:10718130"
/translation="MSAPKIFERPTDLIGAEGTQLGPTEWLPIDQERVNGFADVTGDH
QWIHVDVERARDGPFGSTIAHGYLTLSLVNMFLPQMIEVRRFAAGVNVGMDKTRFLSP
VLVGSRIRGTGEIVRVEEVKGAIQSTVRVTIEIEGSDKPALVIDTISRYFPETE"
misc_feature complement(292842..293285)
/locus_tag="PP1Y_Mpl2960"
/note="NodN (nodulation factor N) contains a single hot
dog fold similar to those of the peroxisomal
Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the
fatty acid synthase beta subunit. Rhizobium and related
species form nodules on the roots of their...; Region:
NodN; cd03450"
/db_xref="CDD:48045"
misc_feature complement(order(293100..293105,293112..293114,
293157..293159,293166..293168,293172..293174,
293187..293189))
/locus_tag="PP1Y_Mpl2960"
/note="putative active site [active]"
/db_xref="CDD:48045"
misc_feature complement(order(293103..293105,293157..293159,
293166..293168,293172..293174))
/locus_tag="PP1Y_Mpl2960"
/note="putative catalytic site [active]"
/db_xref="CDD:48045"
gene complement(293297..294082)
/locus_tag="PP1Y_Mpl2964"
/db_xref="GeneID:10718131"
CDS complement(293297..294082)
/locus_tag="PP1Y_Mpl2964"
/EC_number="1.1.1.100"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:C3JV04"
/note="assigned by KAAS to KEGG Orthology:K00059
3-oxoacyl-[acyl-carrier protein] reductase"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-[acyl-carrier protein] reductase"
/protein_id="YP_004538208.1"
/db_xref="GI:334144999"
/db_xref="GeneID:10718131"
/translation="MTVPVPSYPAPLGLLKGKTVVVTAAAGTGIGFSAAKRAAEEGAR
LLISDFHERRLGEAADRIADEVGCERPATWVCDVTSEAAVQGLRDGALAALGKVDVLI
NNAGLGGEVSVVDMTDEQWSRVLDVTLTSLFRMTRAFLPSMYAAKSGVMVNNASVLGW
RAQRGQAHYAAAKAGVMAFTRCSALEAADHGVRINAVAPSLAMHPFLAKVTTEEALAE
LVKKEAYGRPAEVWEVANVMMFLASDLSSYMTGEIVPVSSQHA"
misc_feature complement(293300..294082)
/locus_tag="PP1Y_Mpl2964"
/note="short chain dehydrogenase; Provisional; Region:
PRK07831"
/db_xref="CDD:181138"
misc_feature complement(293315..294025)
/locus_tag="PP1Y_Mpl2964"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(293468..293473,293477..293488,
293564..293566,293576..293578,293615..293623,
293702..293704,293765..293773,293849..293857,
293930..293938,293993..293998,294002..294007,
294011..294013))
/locus_tag="PP1Y_Mpl2964"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(293564..293566,293576..293578,
293615..293617,293699..293701))
/locus_tag="PP1Y_Mpl2964"
/note="active site"
/db_xref="CDD:212491"
gene complement(294079..295257)
/locus_tag="PP1Y_Mpl2969"
/db_xref="GeneID:10718132"
CDS complement(294079..295257)
/locus_tag="PP1Y_Mpl2969"
/inference="protein motif:COG:COG1960"
/inference="similar to AA sequence:UniProt:Q0S7V4"
/note="KEGG: nar:Saro_3762"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase domain-containing
protein"
/protein_id="YP_004538209.1"
/db_xref="GI:334145000"
/db_xref="GeneID:10718132"
/translation="MKLGFSAEDETFRAEAAQWLQGQMAGEFKDIAGISNLVSKVERR
KEWERQLAAHRWSCIGWPVEWGGRDATLAQQVIFAEEYARAGAPNRINHIGVELAGPT
ILAFGTQEQKVRYLPGIAAGTQIWCQGYSEPNAGSDLANVKTKARLEGDEWVVTGQKV
WTSLAHFSDYIFVVARSEEGSKGPKGLSFLLMDMDQPGIEVRPIRQMNGEAEFNETFL
DEARCPADATLGEPGKGWGVAMGLLAFERGVSTLAQQMQFRNELDAIVAAARTNGKAA
DPVTRQKIARAEIGLNLMRYGALRMLSNTDHATIDGAALTYKIQWATWRRDLGELAME
VLGQAGEIAGGEAYEWSLLPNMFLFSRSDTIYGGTNQIQRNLIAERGLGLPREPRGDK
"
misc_feature complement(294106..295251)
/locus_tag="PP1Y_Mpl2969"
/note="pimeloyl-CoA dehydrogenase, large subunit; Region:
pimC_large; TIGR03204"
/db_xref="CDD:132248"
misc_feature complement(294109..295236)
/locus_tag="PP1Y_Mpl2969"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:209100"
misc_feature complement(order(294145..294147,294151..294153,
294157..294165,294769..294771,294775..294777,
294868..294870,294874..294876,294964..294966))
/locus_tag="PP1Y_Mpl2969"
/note="active site"
/db_xref="CDD:173838"
gene complement(295254..296306)
/locus_tag="PP1Y_Mpl2978"
/db_xref="GeneID:10718133"
CDS complement(295254..296306)
/locus_tag="PP1Y_Mpl2978"
/inference="protein motif:COG:COG1960"
/inference="similar to AA sequence:UniProt:A5VCG2"
/note="KEGG: nar:Saro_3761"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase domain-containing
protein"
/protein_id="YP_004538210.1"
/db_xref="GI:334145001"
/db_xref="GeneID:10718133"
/translation="MEFAFNEEQAMIAETVQAFFAENATSERTRAAMEADGIDRELWA
SFCMELGLSGIGIAEEDGGVGLGMVELAIVAEAAGSQVSAIPLLGLATAGQAIAAGGS
AAQKEQWLGALVSGEAIAAAAHAPAIRAVGGRLSGTVPFVAHGGLADVLVLVGEDAAW
LVATGDAGVTVTRHTTMDQTRPLATVTLDGAAGAALDFAGARDALHAAGWVCLAAEAL
GGAQATLERTVQYSTERMQFGRPIGSFQAYKHRLADMMVLIEQARSAVYWAACAVDEG
APEAQLALHCAKAFCADTYFECAGHMIQLHGGIGFTWEHDAHLFFKRATSIRSMMGDG
DWHREQVARLTIGEAA"
misc_feature complement(295257..296306)
/locus_tag="PP1Y_Mpl2978"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:32143"
misc_feature complement(295956..296291)
/locus_tag="PP1Y_Mpl2978"
/note="Acyl-CoA dehydrogenase, N-terminal domain; Region:
Acyl-CoA_dh_N; pfam02771"
/db_xref="CDD:202383"
misc_feature complement(295278..295994)
/locus_tag="PP1Y_Mpl2978"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cd00567"
/db_xref="CDD:173838"
misc_feature complement(order(295302..295304,295308..295310,
295314..295322,295878..295880,295884..295886,
295935..295937,295941..295943))
/locus_tag="PP1Y_Mpl2978"
/note="active site"
/db_xref="CDD:173838"
gene complement(296310..297215)
/locus_tag="PP1Y_Mpl2987"
/db_xref="GeneID:10718134"
CDS complement(296310..297215)
/locus_tag="PP1Y_Mpl2987"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A1SP82"
/note="KEGG: nfa:nfa5120"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase"
/protein_id="YP_004538211.1"
/db_xref="GI:334145002"
/db_xref="GeneID:10718134"
/translation="MGICEGRVAIVTGAGNGLGKAYALGLAAEGCRLVVNDLGVGTHG
EDGETRGAAERVVDEIRAMGGEAVANTDDVAEWDAGKRMVEAALDNFGELHAVVNNAG
FVRDRMFFTCSPEEWDAVIRVHLRGHFCTSRHAAEYWRGRSKAGKPVDGRIINTTSGA
GLQGSVGQSAYSTAKGGIATLTLVQAAELARLGVTANALAPNARTRMTDTGAFDMDVK
DGEFDVFAPENMAPLVSYLVSAQSKGVTGQVFELKGGEIFLSQGWTDSPSIDKGARFE
PGELDPIVRKLLEDRAPAKPVYGAG"
misc_feature complement(296361..297215)
/locus_tag="PP1Y_Mpl2987"
/note="short chain dehydrogenase; Provisional; Region:
PRK07791"
/db_xref="CDD:181119"
misc_feature complement(296331..297203)
/locus_tag="PP1Y_Mpl2987"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Provisional; Region: fabG; PRK07792"
/db_xref="CDD:181120"
misc_feature complement(order(296604..296615,296691..296693,
296703..296705,296742..296750,296910..296918,
297099..297107,297162..297164,297168..297173,
297177..297179))
/locus_tag="PP1Y_Mpl2987"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(296691..296693,296703..296705,
296742..296744,296844..296846))
/locus_tag="PP1Y_Mpl2987"
/note="active site"
/db_xref="CDD:187535"
gene complement(297235..298386)
/locus_tag="PP1Y_Mpl2994"
/db_xref="GeneID:10718135"
CDS complement(297235..298386)
/locus_tag="PP1Y_Mpl2994"
/EC_number="2.3.1.9"
/inference="protein motif:COG:COG0183"
/inference="similar to AA sequence:UniProt:A3PZ14"
/note="assigned by KAAS to KEGG Orthology:K00626
acetyl-CoA C-acetyltransferase"
/codon_start=1
/transl_table=11
/product="acetyl-CoA C-acetyltransferase"
/protein_id="YP_004538212.1"
/db_xref="GI:334145003"
/db_xref="GeneID:10718135"
/translation="MPEAYIVDAVRTPIGRKKGSLAQVHPADLGAHPIKALVARTGID
ANLVDDVVWGCCDTIGPQAGDIGRTAWLVAGMPEHVPGVTIDRQCGSSQQAVHFAAQG
VMSGTQDLVVAGGSQAMNAIPISAAMFAGQPYGFDSPFLGSKGWDARYGDEEVNQIRS
AEMIAEKWGISRAAMEQFALTSHQRAQAAWDAGWFDREVAQFEGLGMDETIRPATTLE
GLAALNPVREGGTITAGVASQNCDAAAALLIAGERAVKEHGLTPRARIHHLSVRAANP
VWMLTGPIPATQYALQKAGMRVEDIDLFECNEAFASVTMAWMKELNIPHEKVNVQGGA
IALGHPIGATGARLMTTLLGALERTGGRYGLQTMCEGGGQANVTIIERL"
misc_feature complement(297238..298386)
/locus_tag="PP1Y_Mpl2994"
/note="acetyl-CoA acetyltransferase; Provisional; Region:
PRK07801"
/db_xref="CDD:181123"
misc_feature complement(297241..298374)
/locus_tag="PP1Y_Mpl2994"
/note="Thiolase are ubiquitous enzymes that catalyze the
reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and...; Region: thiolase;
cd00751"
/db_xref="CDD:29411"
misc_feature complement(order(297268..297273,297508..297510,
297568..297570,297574..297576,297580..297582,
298027..298029,298072..298074,298081..298086,
298105..298107,298129..298140,298171..298173,
298183..298185,298192..298194,298237..298239,
298318..298320))
/locus_tag="PP1Y_Mpl2994"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29411"
misc_feature complement(order(297280..297282,297370..297372,
298120..298122))
/locus_tag="PP1Y_Mpl2994"
/note="active site"
/db_xref="CDD:29411"
gene complement(298379..299410)
/locus_tag="PP1Y_Mpl3007"
/db_xref="GeneID:10718136"
CDS complement(298379..299410)
/locus_tag="PP1Y_Mpl3007"
/inference="protein motif:COG:COG1960"
/inference="similar to AA sequence:UniProt:A4XFA5"
/note="KEGG: nar:Saro_3757"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase domain-containing
protein"
/protein_id="YP_004538213.1"
/db_xref="GI:334145004"
/db_xref="GeneID:10718136"
/translation="MDFTLNDEQQMFAETARQLFADTCTPDHWRRQMESGAVLDEERW
AQIVDTGFPLVLLPEEAGGLGLGELDFALIAEAAGYNALPDPLVESAGIATPLLAAAR
PEIELIADPAAIVGIQHPANPYVADAEAASALILHKEGEAYLAAREDVTLKRKESIDP
FRRLYTVEWDPAKAQPLGAVDWELALDRGALFAAAQGLGLAQRAVDLAVEYAKERQQF
GKPIGTYQAVKHHLSSAQVAIEFARPVVLAAAADLAHGDVQSRARISHAKLVALEAAD
QAARASIQVHGAMGYSWEVDVHLFLKRTLALTSSWGTPYFHRQRIMHRIAAQPLGPDQ
TFARETVHA"
misc_feature complement(<299171..299395)
/locus_tag="PP1Y_Mpl3007"
/note="Acyl-CoA dehydrogenase, N-terminal domain; Region:
Acyl-CoA_dh_N; pfam02771"
/db_xref="CDD:202383"
misc_feature complement(298415..>298795)
/locus_tag="PP1Y_Mpl3007"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:32143"
misc_feature complement(298442..>298795)
/locus_tag="PP1Y_Mpl3007"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:209100"
misc_feature complement(order(298466..298468,298472..298474,
298478..298486))
/locus_tag="PP1Y_Mpl3007"
/note="active site"
/db_xref="CDD:173838"
gene complement(299425..300579)
/locus_tag="PP1Y_Mpl3014"
/db_xref="GeneID:10718137"
CDS complement(299425..300579)
/locus_tag="PP1Y_Mpl3014"
/inference="protein motif:COG:COG1960"
/inference="similar to AA sequence:UniProt:A8H4J2"
/note="KEGG: nar:Saro_3756"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase domain-containing
protein"
/protein_id="YP_004538214.1"
/db_xref="GI:334145005"
/db_xref="GeneID:10718137"
/translation="MDLSYTPEQQAFRAEVRSWLEAHVPKAPLEHYDATREGFEAHRE
WEKTLKSGDWGMVTWPSEYGGRGLDLIQWLIFEEEYYRARAPGRVNQNGIFLLGPTLM
EFGTHEQKSRFLTRMASGEEIWAQAWSEPMAGSDLAGVRATVVLDGDEYVLNGHKIWS
SRAAFADWAFGLFRAPGSERHHGMSLIFFPLDAPGVTVNPIRKINGHVGFAEIFLENV
RVPAFNRLGEEGQGWHICMATAGFERGLMLRSPARYQVAAAELARLWQARKDDPWVDP
ALEADVVRAFMNAEAYALSIYQTASRLMAGAKIGPEASTNKIFWSELDIHLHRTALAI
LGPEAEVLSEPGAHDWIDDYIFSLAGPIYAGSNEIQRNIIAERMLGLPRK"
misc_feature complement(299437..300576)
/locus_tag="PP1Y_Mpl3014"
/note="pimeloyl-CoA dehydrogenase, large subunit; Region:
pimC_large; TIGR03204"
/db_xref="CDD:132248"
misc_feature complement(299440..300561)
/locus_tag="PP1Y_Mpl3014"
/note="Putative acyl-CoA dehydrogenases similar to fadE6,
fadE17, and fadE26; Region: ACAD_fadE6_17_26; cd01152"
/db_xref="CDD:173841"
misc_feature complement(order(300097..300099,300103..300105,
300175..300180,300193..300198,300202..300204))
/locus_tag="PP1Y_Mpl3014"
/note="FAD binding site [chemical binding]; other site"
/db_xref="CDD:173841"
misc_feature complement(order(299452..299454,299485..299490,
300034..300036,300175..300177))
/locus_tag="PP1Y_Mpl3014"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173841"
misc_feature complement(299851..299853)
/locus_tag="PP1Y_Mpl3014"
/note="catalytic base [active]"
/db_xref="CDD:173841"
gene complement(300579..301334)
/locus_tag="PP1Y_Mpl3023"
/db_xref="GeneID:10718138"
CDS complement(300579..301334)
/locus_tag="PP1Y_Mpl3023"
/EC_number="4.2.1.17"
/inference="protein motif:COG:COG1024"
/inference="similar to AA sequence:UniProt:Q396R1"
/note="assigned by KAAS to KEGG Orthology:K01692 enoyl-CoA
hydratase"
/codon_start=1
/transl_table=11
/product="enoyl-CoA hydratase"
/protein_id="YP_004538215.1"
/db_xref="GI:334145006"
/db_xref="GeneID:10718138"
/translation="MPITTTIKDRIAEIVFDVPPVNAFDSETWMSIPAIVTEAGRNPD
VNCVLIRAAEESRGFCGGVDIKEMQAHPERITVLNRGNYLTFKAIHEAEVPVVVAVHK
FVIGGGIGICGASDTIIAADDAFFSLPEVDRGAMGGASHMSRMLPLHKVRAAFFTGGN
IPAQEAYRLGAIEKVVPRADLVKEARAFCELVAAKSRKALVIAKEALNGLEARDVDRG
YRWEQGFTLEMYMHEDSQKSRDAFVETGKAAKF"
misc_feature complement(300603..301328)
/locus_tag="PP1Y_Mpl3023"
/note="enoyl-CoA hydratase; Provisional; Region: PRK06495"
/db_xref="CDD:168580"
misc_feature complement(300765..301328)
/locus_tag="PP1Y_Mpl3023"
/note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate synthase,
methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
dehydratase, and dienoyl-CoA isomerase; Region:
crotonase-like; cd06558"
/db_xref="CDD:119339"
misc_feature complement(order(300936..300938,300945..300950,
301014..301022,301026..301028,301140..301154,
301164..301166,301266..301268,301272..301274))
/locus_tag="PP1Y_Mpl3023"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119339"
misc_feature complement(order(301014..301016,301146..301148))
/locus_tag="PP1Y_Mpl3023"
/note="oxyanion hole (OAH) forming residues; other site"
/db_xref="CDD:119339"
misc_feature complement(order(300771..300773,300816..300818,
300825..300827,300858..300860,300867..300872,
300876..300881,300885..300890,300903..300908,
300912..300920,300924..300926,300933..300944,
300978..300989,301050..301052,301074..301076))
/locus_tag="PP1Y_Mpl3023"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
gene complement(301346..302434)
/locus_tag="PP1Y_Mpl3030"
/db_xref="GeneID:10718139"
CDS complement(301346..302434)
/locus_tag="PP1Y_Mpl3030"
/inference="protein motif:COG:COG2070"
/inference="similar to AA sequence:UniProt:A5VCF6"
/note="KEGG: nar:Saro_3754"
/codon_start=1
/transl_table=11
/product="2-nitropropane dioxygenase"
/protein_id="YP_004538216.1"
/db_xref="GI:334145007"
/db_xref="GeneID:10718139"
/translation="MGNPLQTVLCERLGCSAPIIQTAMGWVAEPSLVIASSNAGAFGF
LGAAVMTPDEVREKILAVRKGTDRPFGVNFHSFQPGADRIVELILENREQVRAVSFGR
GPNARMIGRFKDAGILCIPTVGAVKHAKKMVELGVDMVSVQGGEGGGHTGSVPTTILL
PQVLDSVDVPVIACGGFADGRGLVAALAYGAVGIAMGTRFLLTQESPVPDVTKAEYLK
ASTDAIVVTTKLDGIPQRMIRSKLMDRIEKSGSLGMWLRAMEAGLQMKKQTGASWLEF
IRSAKGMTAHGAMPLKQAMMAATMPMLIQKAVVEGDVEHGVMATGVVGGRIAEIPTCE
QLVGRIMEQARGRLEALGVPAPQPASAA"
misc_feature complement(301382..302419)
/locus_tag="PP1Y_Mpl3030"
/note="putative enoyl-[acyl-carrier-protein] reductase II;
Region: enACPred_II; TIGR03151"
/db_xref="CDD:132195"
misc_feature complement(301721..302383)
/locus_tag="PP1Y_Mpl3030"
/note="2-Nitropropane dioxygenase (NPD), one of the
nitroalkane oxidizing enzyme families, catalyzes oxidative
denitrification of nitroalkanes to their corresponding
carbonyl compounds and nitrites. NDP is a member of the
NAD(P)H-dependent flavin oxidoreductase...; Region:
NPD_like; cd04730"
/db_xref="CDD:73392"
misc_feature complement(order(301841..301852,301907..301915,
301991..301996,302006..302008,302069..302071,
302132..302134,302363..302368))
/locus_tag="PP1Y_Mpl3030"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73392"
misc_feature complement(301985..301990)
/locus_tag="PP1Y_Mpl3030"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73392"
misc_feature complement(301985..301987)
/locus_tag="PP1Y_Mpl3030"
/note="putative catalytic residue [active]"
/db_xref="CDD:73392"
gene complement(302434..303333)
/locus_tag="PP1Y_Mpl3038"
/db_xref="GeneID:10718140"
CDS complement(302434..303333)
/locus_tag="PP1Y_Mpl3038"
/EC_number="4.2.1.17"
/inference="protein motif:COG:COG1024"
/inference="similar to AA sequence:UniProt:A8H4I9"
/note="assigned by KAAS to KEGG Orthology:K01692 enoyl-CoA
hydratase"
/codon_start=1
/transl_table=11
/product="enoyl-CoA hydratase"
/protein_id="YP_004538217.1"
/db_xref="GI:334145008"
/db_xref="GeneID:10718140"
/translation="MSDFVEPQKVDIVYETGEPVTYEVIDHVAWIMMNRPTFNNAQNG
QMTYALDDAFMRATNDDEVRCIVLGGNGKHFSAGHDIGTPGRDLHFEFDKRLMVAPHT
NKPAAELLYTREKEQYLGMCRRWRDVPKPTIAMVQGACVAGGLMLAWVCDLIVASEDA
FFQDPVNPLMGIPGVEYFAHAYELPPRIAKEFLLLGERMSAQRAEQFGMVNKLVPRAE
LRDAVATWAAKLAGQPRLGNWLTKQAVNHVEELGGKRTAMDAVYHMHHFAHAQNDLVT
GNSIAGVSGKSAASANKKDAGES"
misc_feature complement(302437..303288)
/locus_tag="PP1Y_Mpl3038"
/note="enoyl-CoA hydratase; Provisional; Region: PRK08290"
/db_xref="CDD:181356"
misc_feature complement(302644..303276)
/locus_tag="PP1Y_Mpl3038"
/note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate synthase,
methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
dehydratase, and dienoyl-CoA isomerase; Region:
crotonase-like; cd06558"
/db_xref="CDD:119339"
misc_feature complement(order(302827..302829,302836..302841,
302905..302913,302917..302919,303091..303105,
303115..303117,303211..303213,303217..303219))
/locus_tag="PP1Y_Mpl3038"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119339"
misc_feature complement(order(302905..302907,303097..303099))
/locus_tag="PP1Y_Mpl3038"
/note="oxyanion hole (OAH) forming residues; other site"
/db_xref="CDD:119339"
misc_feature complement(order(302644..302649,302656..302658,
302701..302703,302710..302712,302743..302745,
302752..302757,302761..302766,302770..302775,
302779..302781,302785..302793,302797..302799,
302824..302835,302869..302880,302941..302943,
302965..302967))
/locus_tag="PP1Y_Mpl3038"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
gene complement(303359..304162)
/locus_tag="PP1Y_Mpl3047"
/db_xref="GeneID:10718141"
CDS complement(303359..304162)
/locus_tag="PP1Y_Mpl3047"
/EC_number="2.8.3.12"
/inference="protein motif:COG:COG2057"
/inference="similar to AA sequence:UniProt:A8H4I8"
/note="assigned by KAAS to KEGG Orthology:K01040
glutaconate CoA-transferase, subunit B"
/codon_start=1
/transl_table=11
/product="glutaconate CoA-transferase subunit B"
/protein_id="YP_004538218.1"
/db_xref="GI:334145009"
/db_xref="GeneID:10718141"
/translation="MTQVTLTELCIFAASEAFRGNGEIVATGVGPVPRLGASLAKLTH
SPELMMTDGECYLVEQPVPIGPRAYDDRKPAGHLPFSRFFDSAVWTGRRHAMVTPTQI
DRFGQINLSYMGGTYQQPKTQMLGVRGFPGNTIYHPNSFFFPAHSPRVFVPGEVDMIS
GAGYNPAKRVAGGNYSGVDLRTIVTNLCVIDFGGKDAEGNRAMRVVSLHPGVTFDEVQ
EATGFALELAEDVAQTPLPGAEALEIIARLDPHGIRASVIKDNPPALRG"
misc_feature complement(303452..304162)
/locus_tag="PP1Y_Mpl3047"
/note="SugarP_isomerase: Sugar Phosphate Isomerase family;
includes type A ribose 5-phosphate isomerase (RPI_A),
glucosamine-6-phosphate (GlcN6P) deaminase, and
6-phosphogluconolactonase (6PGL). RPI catalyzes the
reversible conversion of ribose-5-phosphate to...; Region:
SugarP_isomerase; cl00339"
/db_xref="CDD:206995"
gene complement(304162..305040)
/locus_tag="PP1Y_Mpl3056"
/db_xref="GeneID:10718142"
CDS complement(304162..305040)
/locus_tag="PP1Y_Mpl3056"
/EC_number="2.8.3.12"
/inference="protein motif:COG:COG1788"
/inference="similar to AA sequence:UniProt:A4XF99"
/note="assigned by KAAS to KEGG Orthology:K01039
glutaconate CoA-transferase, subunit A"
/codon_start=1
/transl_table=11
/product="glutaconate CoA-transferase subunit A"
/protein_id="YP_004538219.1"
/db_xref="GI:334145010"
/db_xref="GeneID:10718142"
/translation="MLDKRMSAAEIVAQIRDGMTVGIGGWGPRRKPMALVRELLRSDV
KDLTVVAYGGADVGMLCAAGKVKKLVFAFVSLDAIPLEPWFRKAREGGKLEVLEVDEG
MFQWGLKAAAFQLPFLPTRVGLGTDLAELGGLKTVQSPYADGETLIAMPALKLDVALV
HVNRSDWRGNVQVYGPDVYYDEWFAKAAQKTFVSCEELVDRMEDHYPEHAQANLFERC
FVNGVVEMPCGAHPSSMPPHYGWDMKAFKAYAGAAKDPGDWDAVKDRFVGASEAQYLE
SNGGKEAVAALPLPIF"
misc_feature complement(304351..305040)
/locus_tag="PP1Y_Mpl3056"
/note="Acyl CoA:acetate/3-ketoacid CoA transferase, alpha
subunit [Lipid metabolism]; Region: AtoD; COG1788"
/db_xref="CDD:31974"
gene complement(305040..305969)
/locus_tag="PP1Y_Mpl3065"
/db_xref="GeneID:10718143"
CDS complement(305040..305969)
/locus_tag="PP1Y_Mpl3065"
/inference="protein motif:COG:COG0346"
/inference="similar to AA sequence:UniProt:A4XF98"
/note="KEGG: nar:Saro_3750"
/codon_start=1
/transl_table=11
/product="glyoxalase/bleomycin resistance
protein/dioxygenase"
/protein_id="YP_004538220.1"
/db_xref="GI:334145011"
/db_xref="GeneID:10718143"
/translation="MGIKALGYVVVETAKPEEWNTFLTQFAGAMRAPDAADGAALYRV
DDRVFRFRIEAGTREWFVAAGYELTDRAALDALAVRIGDAARPVEWADANEAAGRGAE
AMFRTSDPAGNGLEFYCGDARSDKPFVSPIGVPEFLTGDLGMGHAVFSAPDFEETIAF
HRDVVGFHETDMPRFHLMGPDAPSMGFAFLHADNGRHHSIAFGEGPVPPSGAVHIMLE
LPDLIEVGKAHDRMKRFGYPESATLGRHVNDETTGFYVQTPSGFDLEIGCDSLIIDPA
SWEVTKHEGISVWGHEWAWQKALKEQQEQEKGA"
misc_feature complement(305091..305963)
/locus_tag="PP1Y_Mpl3065"
/note="2,3-dihydroxybiphenyl 1,2-dioxygenase; Region:
23dbph12diox; TIGR03213"
/db_xref="CDD:132257"
misc_feature complement(305601..305960)
/locus_tag="PP1Y_Mpl3065"
/note="N-terminal domain of 2,3-dihydroxybiphenyl
1,2-dioxygenase (BphC, EC 1.13.11.39) 1 from Rhodococcus
globerulus P6 (BphC1-RGP6) and similar proteins; Region:
BphC1-RGP6_N_like; cd07252"
/db_xref="CDD:176675"
misc_feature complement(305094..305567)
/locus_tag="PP1Y_Mpl3065"
/note="C-terminal domain of 2,3-dihydroxybiphenyl
1,2-dioxygenase (BphC, EC 1.13.11.39) 1 from Rhodococcus
globerulus P6 (BphC1-RGP6) and similar proteins; Region:
BphC1-RGP6_C_like; cd07237"
/db_xref="CDD:176661"
misc_feature complement(order(305112..305114,305175..305177,
305205..305207,305223..305228,305232..305234,
305328..305333,305355..305357,305376..305378,
305403..305405,305451..305453,305532..305534))
/locus_tag="PP1Y_Mpl3065"
/note="active site"
/db_xref="CDD:176661"
misc_feature complement(order(305175..305177,305328..305330,
305532..305534))
/locus_tag="PP1Y_Mpl3065"
/note="Fe binding site [ion binding]; other site"
/db_xref="CDD:176661"
gene complement(305977..306741)
/locus_tag="PP1Y_Mpl3073"
/db_xref="GeneID:10718144"
CDS complement(305977..306741)
/locus_tag="PP1Y_Mpl3073"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A5VCF3"
/note="KEGG: swi:Swit_3623"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase"
/protein_id="YP_004538221.1"
/db_xref="GI:334145012"
/db_xref="GeneID:10718144"
/translation="MGKQTIDLSGKVAIVTGGTRGLGRGIADALAQTGASVVVCGRSE
PDDLPVGVRFRAADIREADQAAALVEAVVEDHGRLDILVNNAGGSPEAPAATASSRFF
DAIVRLNLNAAMYMSQAAHAPMQAAGAGSIVNIASVSGIRPSPGTAAYGAAKAGLLNL
TQSLAQEWGPDGIRVNALILGLMQTETSQLTYGETEAQARVGASMPLGRMGTGQDAAG
AVLWLCSEMASWVSGARINVDGGGERPYFLDLVKGN"
misc_feature complement(305980..306729)
/locus_tag="PP1Y_Mpl3073"
/note="short chain dehydrogenase; Provisional; Region:
PRK07856"
/db_xref="CDD:181148"
misc_feature complement(306025..306705)
/locus_tag="PP1Y_Mpl3073"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(306184..306189,306193..306204,
306280..306282,306292..306294,306331..306339,
306418..306420,306481..306489,306565..306573,
306613..306621,306676..306687,306691..306693))
/locus_tag="PP1Y_Mpl3073"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(306280..306282,306292..306294,
306331..306333,306415..306417))
/locus_tag="PP1Y_Mpl3073"
/note="active site"
/db_xref="CDD:212491"
gene 306934..308148
/locus_tag="PP1Y_Mpl3084"
/db_xref="GeneID:10718145"
CDS 306934..308148
/locus_tag="PP1Y_Mpl3084"
/inference="protein motif:COG:COG1960"
/inference="similar to AA sequence:UniProt:A4XF39"
/note="KEGG: nar:Saro_3691"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase type 2"
/protein_id="YP_004538222.1"
/db_xref="GI:334145013"
/db_xref="GeneID:10718145"
/translation="MASTASVTDAAAAIPTPEQLVERARAMIPVLKERAAKCVADRDV
PADSIAEMQDAGFFRILQPRRWGGFEMSPNAFYDVQKALAEGCMSTGWMFGVVGCHPY
ELALFDDRAQQEVWGTDTSVLVSSSYQPVGKVTPVEGGFRLSGHWGFSTGSIHCDWVL
LGSMVPPSEPGGAPDMRTFLLPRKDYTINRDAWQVFGLQGTGSHDIIVDDVFVPEYRT
HRSVHGFLCENPGQKENDAPLFTLPWAQVFTRSVSTAAFGGARAAVNAAVQIMKDRVS
TNTGKASKADPFLHAAIAKAHAQIIEMETTLRATFDELMGYAERGEKIPMQKRTLFAY
QSSTVVRRLADLADDMMKLLGGRAIYNTSPIIQPWLDLHAGRAHVANDPSNRTADLVG
SMLGEEPKFTFL"
misc_feature 306997..308118
/locus_tag="PP1Y_Mpl3084"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:209100"
misc_feature 306997..>307578
/locus_tag="PP1Y_Mpl3084"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:32143"
misc_feature order(307225..307227,307315..307317,307321..307323,
307378..307380,307384..307386,308074..308085,
308092..308094,308098..308100)
/locus_tag="PP1Y_Mpl3084"
/note="active site"
/db_xref="CDD:173838"
gene 308160..308978
/locus_tag="PP1Y_Mpl3096"
/db_xref="GeneID:10718146"
CDS 308160..308978
/locus_tag="PP1Y_Mpl3096"
/inference="protein motif:COG:COG0596"
/inference="similar to AA sequence:UniProt:A4XF38"
/note="KEGG: swi:Swit_3338"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold protein"
/protein_id="YP_004538223.1"
/db_xref="GI:334145014"
/db_xref="GeneID:10718146"
/translation="MADMKEATYRVAGGYDIHIRECGQGPAVVFFHGSGPGASGISNF
RQNVDAFVEAGYRVVLPDLIGYGSSSKPEGIDYTLTLFVETVYEALRQHGLEKASLVG
NSLGGGIAIEIAADHPEFVQNMILMAPGCIEELDVYFAMPGIANMRSSFGSPDFSEAD
QRRLNESLVYDPAMVTDELVAERFAVSKTQPKDVIVRMRTHNVRPRLPELKMPIQLFW
GRDEAFMPLSGIDYFFEACEDVRCVTFSKVGHWVQLERAAEFNRYATGFLDEHC"
misc_feature 308202..308963
/locus_tag="PP1Y_Mpl3096"
/note="2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
hydrolase; Region: biphenyl_bphD; TIGR03343"
/db_xref="CDD:132386"
misc_feature 308232..>308543
/locus_tag="PP1Y_Mpl3096"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene 308947..309768
/locus_tag="PP1Y_Mpl3103"
/db_xref="GeneID:10718147"
CDS 308947..309768
/locus_tag="PP1Y_Mpl3103"
/inference="protein motif:COG:COG3971"
/inference="similar to AA sequence:UniProt:B0TTT1"
/note="KEGG: nar:Saro_3689"
/codon_start=1
/transl_table=11
/product="hydratase/decarboxylase"
/protein_id="YP_004538224.1"
/db_xref="GI:334145015"
/db_xref="GeneID:10718147"
/translation="MQPDSSMSTAETYGKALYDALRGRKTLAPLIEQDNALTIDDAYA
ISLDFLARRRADGEKVVGKKIGVTSRAVQDMLDVHQPDFGFLTDWMYVEGDIDIDDKA
LIAPRAEAEIAFVLKEGLKGPGVTAADVMAATESIVPCFEIVDSRITDWKISIVDTVS
DNASCGVYVLGEERLDPAGLDLPGLHVAVTKNGEPLSEGYGHAVQGDPAQAVAWLANT
LGQYGVTLDAGDVILSGSLVPLAPAVKGDRFEMILSDSNPENGGRKIGSCVAQFV"
misc_feature 308977..309762
/locus_tag="PP1Y_Mpl3103"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; cl11421"
/db_xref="CDD:211461"
gene 309797..310741
/locus_tag="PP1Y_Mpl3112"
/db_xref="GeneID:10718148"
CDS 309797..310741
/locus_tag="PP1Y_Mpl3112"
/EC_number="1.2.1.10"
/inference="protein motif:COG:COG4569"
/inference="similar to AA sequence:UniProt:Q46NW7"
/note="assigned by KAAS to KEGG Orthology:K04073
acetaldehyde dehydrogenase"
/codon_start=1
/transl_table=11
/product="acetaldehyde dehydrogenase"
/protein_id="YP_004538225.1"
/db_xref="GI:334145016"
/db_xref="GeneID:10718148"
/translation="MARVKAAIIGSGNIGTDLMMKMIKYPQNMELAAVVGIDPNSEGL
AMAREHGIATTHEGIEGLKKLPCYPEIGIAFDATSAYAHKVHDEALRADGIQVVDLTP
AAIGPFTVPPVNMHANLDATNVNMVTCGGQATIPMVAAVSRVASRVPYAEIVASVSSR
SAGPGTRANIDEFTRTTANAIEKVGGAEKGKAIIILNPAEPPMIMRDTVFTLSEGADE
DTIRQSVKNMVAEVQKYVPGYRLKQEVQFERFGDNNKLKIPGRGEFTGLKTMIMLEVE
GAGDYLPSYSGNLDIMTAAAKATGELLAQRRMAAKENA"
misc_feature 309797..310738
/locus_tag="PP1Y_Mpl3112"
/note="acetaldehyde dehydrogenase; Validated; Region:
PRK08300"
/db_xref="CDD:181366"
misc_feature 309809..310159
/locus_tag="PP1Y_Mpl3112"
/note="Semialdehyde dehydrogenase, NAD binding domain;
Region: Semialdhyde_dh; smart00859"
/db_xref="CDD:197927"
misc_feature 310181..310645
/locus_tag="PP1Y_Mpl3112"
/note="Prokaryotic acetaldehyde dehydrogenase,
dimerisation; Region: AcetDehyd-dimer; pfam09290"
/db_xref="CDD:150078"
gene 310738..311778
/locus_tag="PP1Y_Mpl3118"
/db_xref="GeneID:10718149"
CDS 310738..311778
/locus_tag="PP1Y_Mpl3118"
/EC_number="4.1.3.39"
/inference="protein motif:COG:COG0119"
/inference="similar to AA sequence:UniProt:P51018"
/note="assigned by KAAS to KEGG Orthology:K01666 4-hydroxy
2-oxovalerate aldolase"
/codon_start=1
/transl_table=11
/product="4-hydroxy 2-oxovalerate aldolase"
/protein_id="YP_004538226.1"
/db_xref="GI:334145017"
/db_xref="GeneID:10718149"
/translation="MMAKFNVEAGEKLYIQDVTLRDGMHAIRHMYGIDHVRDIASAIE
KSGVDAIEVAHGDGLSGASFNYGFGAHTDWEWLEAVADVLDKCVLTTLILPGVGTVEE
LRRAYDIGVRSVRVATHCTEADVSKQHIGIARDLGMDVSGFLMMSHMIEPEVLAQQAL
LMESYGAQCVYVTDSGGALDMDGVRARFEAYDRVLKPETQRGMHAHHNLGLGVANSIV
AAQCGAVRIDASLTGMGAGAGNAPLEVFIAAVDRKGWNHGCDVNLLMDAAEDLVRPLQ
DRPVRVDRETLSLGYAGVYSSFLRHAEKASETYGIDTRAILVELGRRKMVGGQEDMIV
DVALDMLKARDE"
misc_feature 310765..311772
/locus_tag="PP1Y_Mpl3118"
/note="4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic
acid aldolase,; Validated; Region: PRK08195"
/db_xref="CDD:181282"
misc_feature 310774..311565
/locus_tag="PP1Y_Mpl3118"
/note="4-hydroxy-2-oxovalerate aldolase, N-terminal
catalytic TIM barrel domain; Region: DRE_TIM_HOA; cd07943"
/db_xref="CDD:163681"
misc_feature order(310798..310803,310810..310812,310891..310893,
311164..311166,311170..311172,311260..311262,
311347..311349,311353..311355)
/locus_tag="PP1Y_Mpl3118"
/note="active site"
/db_xref="CDD:163681"
misc_feature order(310798..310803,310891..310893)
/locus_tag="PP1Y_Mpl3118"
/note="catalytic residues [active]"
/db_xref="CDD:163681"
misc_feature order(310801..310803,311347..311349,311353..311355)
/locus_tag="PP1Y_Mpl3118"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163681"
misc_feature 311569..311766
/locus_tag="PP1Y_Mpl3118"
/note="DmpG-like communication domain; Region: DmpG_comm;
pfam07836"
/db_xref="CDD:149094"
gene 311792..312424
/locus_tag="PP1Y_Mpl3132"
/db_xref="GeneID:10718150"
CDS 311792..312424
/locus_tag="PP1Y_Mpl3132"
/inference="protein motif:COG:COG0431"
/inference="similar to AA sequence:UniProt:A1UJN8"
/note="KEGG: ami:Amir_0225"
/codon_start=1
/transl_table=11
/product="NADPH-dependent FMN reductase"
/protein_id="YP_004538227.1"
/db_xref="GI:334145018"
/db_xref="GeneID:10718150"
/translation="MTTLDKAIELASAGVEADRPTFVVALGGTTSANSSTEKALRIAL
EGAAAGGAETLLISGPELELPIYAWERKERTPAAQHLIASLRRADGVIIGSPGYHGTI
SGLVKNALDYVEDMSKDEWPYFHGRPVGAVATGAGWQGAVMTLTTLRGIVHALRGWNT
PLGVAINTSQPMFDGDGRCLDEKIDTMLRAMGREVAEAARTRALLETPRL"
misc_feature 311858..312289
/locus_tag="PP1Y_Mpl3132"
/note="NADPH-dependent FMN reductase; Region: FMN_red;
pfam03358"
/db_xref="CDD:202604"
gene 312421..313875
/locus_tag="PP1Y_Mpl3136"
/db_xref="GeneID:10718151"
CDS 312421..313875
/locus_tag="PP1Y_Mpl3136"
/inference="protein motif:COG:COG1053"
/inference="similar to AA sequence:UniProt:C0LMX2"
/note="KEGG: nar:Saro_3686"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538228.1"
/db_xref="GI:334145019"
/db_xref="GeneID:10718151"
/translation="MTDISLHRPFPASQVPAWDFETQVVVIGFGAAGACAAIEAADAG
ARVMVFERNSGSGGASALSGGEIYIGGGTDAQRAAGFEDTTEALAAYLKAAGGPYADE
AKCDLYAEQSLSHYDWLKAQGVPYRGNYLPGKHIEPVDDSTLIWSGSEAAQPFCDIAT
PAPRGHVIQHAGWGGGRPLIDILEARARDLGVEVVADARAVALIADGERIVGAVFRID
NRNRYVKAARGVVLATGGFVFNEEMRRKYCPETFSINAPIGDKDDGTGILLGMGAGGD
AIHMEQFFTTCPWTMPEPHAKGVFVNVAGQRFVNEDCYHGRVSRCAVDQPGGKVYLLL
DCAHFSQPLDIAQMRIAATGETWEEVEAELEMPEGTLSATMAFYNRHARKGCDPLFGK
RTPILTPLEEGPFVALELDFMDSYFSFFTLGGLRTSVDGEVLDRAGHPVSGLFAAGRC
TSGLPAWGHGYSSGMSLADCTFFGRRAGSRAAGS"
misc_feature 312424..313869
/locus_tag="PP1Y_Mpl3136"
/note="hypothetical protein; Validated; Region: PRK07121"
/db_xref="CDD:180854"
gene 313910..314695
/locus_tag="PP1Y_Mpl3155"
/db_xref="GeneID:10718152"
CDS 313910..314695
/locus_tag="PP1Y_Mpl3155"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XF95"
/note="KEGG: nar:Saro_3747"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538229.1"
/db_xref="GI:334145020"
/db_xref="GeneID:10718152"
/translation="MGENNMILQDKVVIITGAGPGMGQAMCRGAGREGAKVVVSARSR
EAIEAIAHDILEAGGEAIAVPCDVAQTDQCNALAKAALDKWGRIDGLVNSAYYHPDWT
ELDTHSIEQLLTAMDVIAVGGVRMAQAVIPTMREQKKGAIVNVSTLASRKPMPGEGGY
AMAKAALNQMSRQLAVELTGTGIRVNTALMGWMMGAPLEQYIQSLGDGAEAFRQQRSS
EIPVGHIPPDADCAKAVYFLLSDYASEITGAALDVNGGDWVAV"
misc_feature 313925..314683
/locus_tag="PP1Y_Mpl3155"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 313925..314677
/locus_tag="PP1Y_Mpl3155"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature order(313958..313960,313964..313969,313973..313975,
314030..314038,314189..314194,314198..314200,
314342..314350,314387..314389,314399..314401,
314477..314488)
/locus_tag="PP1Y_Mpl3155"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(314264..314266,314348..314350,314387..314389,
314399..314401)
/locus_tag="PP1Y_Mpl3155"
/note="active site"
/db_xref="CDD:187535"
gene 314708..315235
/locus_tag="PP1Y_Mpl3164"
/db_xref="GeneID:10718154"
CDS 314708..315235
/locus_tag="PP1Y_Mpl3164"
/inference="protein motif:COG:COG4891"
/inference="similar to AA sequence:UniProt:A4XF94"
/note="KEGG: nar:Saro_3746"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538230.1"
/db_xref="GI:334145021"
/db_xref="GeneID:10718154"
/translation="MLDWMRCAPTLAEDPVSGFDPEAVTVSETVEIAAPARIVWAILT
DVPRYAEWNPFCVRAASTLEMGAAVEMTLVNYAAPGSLVPNCEYICGFEPEKLLSWEM
VHSEAWPYPARRDQVIEATGENSCRYHSTDAFLGANGIHVHRFAGPWIKRAFDDSARA
LKARAEAMFAAEEES"
misc_feature 314780..315175
/locus_tag="PP1Y_Mpl3164"
/note="Ligand-binding SRPBCC domain of an uncharacterized
subfamily of proteins; Region: SRPBCC_4; cd07822"
/db_xref="CDD:176864"
misc_feature order(314783..314785,314789..314791,314795..314797,
314822..314830,314834..314839,314873..314875,
314897..314899,314903..314905,314909..314911,
314915..314917,314966..314968,314972..314974,
314999..315001,315005..315007,315047..315052,
315056..315058,315062..315064,315089..315091,
315095..315097,315101..315103,315107..315109,
315143..315157,315161..315169,315173..315175)
/locus_tag="PP1Y_Mpl3164"
/note="putative hydrophobic ligand binding site [chemical
binding]; other site"
/db_xref="CDD:176864"
gene 315240..315776
/locus_tag="PP1Y_Mpl3169"
/db_xref="GeneID:10718155"
CDS 315240..315776
/locus_tag="PP1Y_Mpl3169"
/inference="similar to AA sequence:UniProt:A5VBK2"
/note="KEGG: swi:Swit_3322"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538231.1"
/db_xref="GI:334145022"
/db_xref="GeneID:10718155"
/translation="MAYTLQQLSDLEAIKILKHRYFRAIDTADMDLLAGMFTEDIMVE
YRGGTYKVALAGRANMLEFLANSFHSGALAMHHGHMPEITLTGDNTAKGIWYLEDIFI
DIEAGTHTYGSAIYRDEYLCEGGVWKLSRTEYDRVIEVVQPIDPAAKITTHYLARTGR
KPEARTDISHLIEWDETV"
misc_feature 315255..315638
/locus_tag="PP1Y_Mpl3169"
/note="SnoaL-like domain; Region: SnoaL_4; pfam13577"
/db_xref="CDD:205755"
gene 315801..316760
/locus_tag="PP1Y_Mpl3176"
/db_xref="GeneID:10718156"
CDS 315801..316760
/locus_tag="PP1Y_Mpl3176"
/inference="protein motif:COG:COG0667"
/inference="similar to AA sequence:UniProt:A4XF33"
/note="KEGG: nar:Saro_3685"
/codon_start=1
/transl_table=11
/product="aldo/keto reductase"
/protein_id="YP_004538232.1"
/db_xref="GI:334145023"
/db_xref="GeneID:10718156"
/translation="MLSRTPLGSTDLSVSVLCYGTNMLGSAIDQESANAILDRFVELG
GNFLDSARIYGDWIPGIPAGASERAIGAWMKSRGNRSDLVIATKGGMFDARAGDYRMR
VNPQDIAKDLGESLDHLGTGTIDLYFLHMDDPDVPVQELIDALAEHQAAGRIRHYAAS
NWAADRIVEANAYAKSAGKPGFVASETFWGLAKPDVEAATRQGYQHYYEGEYEALHET
MPMIAYAATSGGYFAMREKGAVADMLAARYGNQDNDRRFAAAQELAAEHGVSINEIVL
GYLVNQPLQTIPVFGASSPERVEEGVKAAKVKLSAGELAQLRG"
misc_feature 315810..316754
/locus_tag="PP1Y_Mpl3176"
/note="Aldo-keto reductases (AKRs) are a superfamily of
soluble NAD(P)(H) oxidoreductases whose chief purpose is
to reduce aldehydes and ketones to primary and secondary
alcohols. AKRs are present in all phyla and are of
importance to both health and industrial...; Region:
Aldo_ket_red; cd06660"
/db_xref="CDD:119408"
misc_feature 315849..316754
/locus_tag="PP1Y_Mpl3176"
/note="Aldo/keto reductase family; Region: Aldo_ket_red;
pfam00248"
/db_xref="CDD:201112"
misc_feature order(315858..315866,315945..315947,315960..315962,
316062..316064,316188..316193,316278..316283,
316356..316358,316470..316487,316614..316616,
316665..316676,316689..316691,316698..316703)
/locus_tag="PP1Y_Mpl3176"
/note="active site"
/db_xref="CDD:119408"
misc_feature order(315945..315947,315960..315962,316062..316064,
316188..316190)
/locus_tag="PP1Y_Mpl3176"
/note="catalytic tetrad [active]"
/db_xref="CDD:119408"
gene complement(316782..317600)
/locus_tag="PP1Y_Mpl3187"
/db_xref="GeneID:10718157"
CDS complement(316782..317600)
/locus_tag="PP1Y_Mpl3187"
/inference="protein motif:COG:COG1082"
/inference="similar to AA sequence:UniProt:A4XF32"
/note="KEGG: nar:Saro_3684"
/codon_start=1
/transl_table=11
/product="xylose isomerase domain-containing protein"
/protein_id="YP_004538233.1"
/db_xref="GI:334145024"
/db_xref="GeneID:10718157"
/translation="MAIMRLSLDHITAVDADPVQLAETASAAGCAGICLFMQSMDVLP
LMPRFDLCSDRSARKDLSRRLADLGLSLDLAYPFTLAGRSDVGAFAPALECAAELGAG
LVNVLCYDRVPARRTDKFGAFCDLAARYDLRVGIEFYPPSQVHLLADALALAMAIDRP
GQVGVNVDLLHLMRSGGTVAELAAAPQQFILYGQLGDGPAQCDCGDLDAEASSARLLP
GEGVFDLAGFVRALPPDCPISVEIPRNHALLAGETREQRVRRAVDSVRGALAKT"
misc_feature complement(316788..317573)
/locus_tag="PP1Y_Mpl3187"
/note="Sugar phosphate isomerases/epimerases [Carbohydrate
transport and metabolism]; Region: IolE; COG1082"
/db_xref="CDD:31279"
gene 317732..318370
/locus_tag="PP1Y_Mpl3196"
/db_xref="GeneID:10718158"
CDS 317732..318370
/locus_tag="PP1Y_Mpl3196"
/inference="protein motif:COG:COG0663"
/inference="similar to AA sequence:UniProt:B1Y4V8"
/note="KEGG: app:CAP2UW1_2752"
/codon_start=1
/transl_table=11
/product="phenylacetic acid degradation protein PaaY"
/protein_id="YP_004538234.1"
/db_xref="GI:334145025"
/db_xref="GeneID:10718158"
/translation="MPCYAFQGIVPVVDTASFVHPLASLIGDVIVGPGCFIGPGASLR
GDFGRIVIEGDTSVQDSTTIHVSSLRDTVIGRGATLAHGAIIHGCIIGSNALIGMNAV
VLDGAEIGEESLVAALSLVKSDTVIPPRSLVAGNPARVVRTFEAHQVTWKNDGKGEYQ
RLAREALTDMLEVEPLAAPEPDRKRVQSNAIAVRLRGEEAAERERRAARDRN"
misc_feature 317738..318289
/locus_tag="PP1Y_Mpl3196"
/note="phenylacetic acid degradation protein PaaY; Region:
PaaY; TIGR02287"
/db_xref="CDD:131340"
misc_feature 317762..318223
/locus_tag="PP1Y_Mpl3196"
/note="Left-handed parallel beta-Helix (LbetaH or LbH)
domain: The alignment contains 5 turns, each containing
three imperfect tandem repeats of a hexapeptide repeat
motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
hexapeptide repeats are often enzymes...; Region: LbetaH;
cl00160"
/db_xref="CDD:193687"
misc_feature order(317837..317839,317843..317845,317855..317857,
317861..317863,317900..317902,317918..317920,
317924..317926,317966..317968,317981..317986,
317990..317992,318017..318019,318029..318031,
318035..318037,318041..318043)
/locus_tag="PP1Y_Mpl3196"
/note="putative trimer interface [polypeptide binding];
other site"
/db_xref="CDD:100038"
misc_feature order(317966..317968,317972..317977,317990..317992,
318023..318025,318041..318043)
/locus_tag="PP1Y_Mpl3196"
/note="putative CoA binding site [chemical binding]; other
site"
/db_xref="CDD:100038"
gene 318415..319101
/locus_tag="PP1Y_Mpl3208"
/db_xref="GeneID:10718159"
CDS 318415..319101
/locus_tag="PP1Y_Mpl3208"
/inference="similar to AA sequence:UniProt:A4XF31"
/note="KEGG: nar:Saro_3683"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538235.1"
/db_xref="GI:334145026"
/db_xref="GeneID:10718159"
/translation="MQTSTETDRNKAAPGRSMGHIALHYGTEADGPVAAKLLGLLGLE
ETQVLHLPGGNFYRFVIGADHFARADGIVYLSCLPEPQRKLIEAIHETLGVGTADEHQ
AVKDMRAMMESDFEASFHFGFLLESLEDLERIVLDLKQRSESDPDIKGRLKFGLNRAR
PGNPEVDARLDTSPLYGDCTRFAYGANGVQAFIETDILRAGQLGDSMVIELDYVFPGY
ENHVLSVVEM"
gene complement(319148..320236)
/locus_tag="PP1Y_Mpl3214"
/db_xref="GeneID:10718160"
CDS complement(319148..320236)
/locus_tag="PP1Y_Mpl3214"
/inference="similar to AA sequence:UniProt:A4XFC1"
/note="KEGG: nar:Saro_3773"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538236.1"
/db_xref="GI:334145027"
/db_xref="GeneID:10718160"
/translation="MNEIPTGHGKLGHVWREFCDRLADAGEVLMHDAAPSTAIDQAEG
LRYLSRLTRTALNMLVDSADPDFPRLFLLCDDKIKIGADNPDNLYQQCVVSPDREYRI
TGKRNSVPYFSIGSKANRYATEGTMVSTGEIEFADMEFGPGGTFEIVASKDRKPGNWL
PMSDDTSLLIVRQTFDDKKTQVPAEVQVERIGQGPAVPGILSPEIIEKQLLGAAQWVR
GTASTFADWSEWFKAQPNRIFDGDQSIFYRAGGDPNIWYGHLYFDLAPGEALVIRAMP
PECRMWNFQLDNWWMESLDHVNNPRVWLNNTMAKYEDDGSVVVVCADADPGFGNWIDL
AGHRSGTALWRWIGASEFPVPQVEVVKF"
gene 320266..320793
/locus_tag="PP1Y_Mpl3226"
/db_xref="GeneID:10718161"
CDS 320266..320793
/locus_tag="PP1Y_Mpl3226"
/inference="similar to AA sequence:UniProt:A4XF70"
/note="KEGG: nar:Saro_3722"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538237.1"
/db_xref="GI:334145028"
/db_xref="GeneID:10718161"
/translation="MPARTGTKGFMTHSLESIAARLQRLEDLEAIRALIANYGPLADS
GKAQALAQLWSEGGEYEVVGFASAKGHEAIAGMIDGPVHRGLMADGCAHLLGPVAIDL
DGDRAIARGHSVVMRHVAGKSAGRFEVHRVSANRWMLERRSDGWRVVHRANALLDGQE
AARVLLTPPVAPRPR"
misc_feature 320332..320718
/locus_tag="PP1Y_Mpl3226"
/note="SnoaL-like domain; Region: SnoaL_4; pfam13577"
/db_xref="CDD:205755"
gene complement(320762..321502)
/locus_tag="PP1Y_Mpl3229"
/db_xref="GeneID:10718162"
CDS complement(320762..321502)
/locus_tag="PP1Y_Mpl3229"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XFC0"
/note="KEGG: nar:Saro_3772"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538238.1"
/db_xref="GI:334145029"
/db_xref="GeneID:10718162"
/translation="MLFAGKKALITGAASGIGRATAIRFAEEGAQVTIGDRNLAGLEE
TAAMMATRPVVQHYDAMDHASSRRLVEVAAKDGLDILCNISGLLKWGPSDTFALEDFE
QLMTINATSVFVLCQAALPYLVKSKGNIVNTASTAALQGIAYTIAYSASKHAVAAITK
GLAIEYGSRGVRVNAICPGHVETPMTQTPPPAGDVDWTLVMRNSPKLENGSCAPEDIA
EMFAFLASDKARKVTGSLFTVDGGQLAG"
misc_feature complement(320771..321502)
/locus_tag="PP1Y_Mpl3229"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(320783..321481)
/locus_tag="PP1Y_Mpl3229"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(320951..320956,320960..320971,
321047..321049,321059..321061,321098..321106,
321182..321184,321245..321253,321323..321328,
321389..321397,321452..321463,321467..321469))
/locus_tag="PP1Y_Mpl3229"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(321047..321049,321059..321061,
321098..321100,321179..321181))
/locus_tag="PP1Y_Mpl3229"
/note="active site"
/db_xref="CDD:212491"
gene complement(321532..323892)
/locus_tag="PP1Y_Mpl3237"
/db_xref="GeneID:10718163"
CDS complement(321532..323892)
/locus_tag="PP1Y_Mpl3237"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:A4XFB9"
/note="KEGG: nar:Saro_3771"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538239.1"
/db_xref="GI:334145030"
/db_xref="GeneID:10718163"
/translation="MRKFLGTTALLTGVLAAAVPAFAQDVAAQQGGADEDYGIGAIVV
TAQKRSENIQDVPIAISAVSEQYLESRGVDSIDKLGTIAPNVKIERAPSSKTISQISI
RGSVTINPAITWEPAVGLYLDGVYIAKAQGSIFDIADLERVEVLRGPQGTLYGRNALA
GAVNLVTKKPSGIAGGSADVTYGSFDEWKFRGVLDLPRTGIFSAKISGQYRKRNGVID
LVADPFDTPGSSLPKRSKTDSIKSGSFMVQVRAEISDDITADYTFDYSKNKQTPPFSQ
LLRVNRNGDPRDIFDPNSAGYAFGGAFFPLNLYTNPDRVSTASIDGDVYEDSRSYGHA
LTVTANLGAAELKSITAYRDLAWKDGLDLDGSPLPVAFTQRLTDYHAFSQELQVTGEA
MSDKLKYVVGAFYFSEKAETQNPQSYFGGATDLTSDYGSHTKAFALYAQLDYKLTDAL
KLTLGARYTYEKKDIARFFRINYDASQGITAPTVIADLPYGTFPDAKYNNFSPAATLS
YEVNPDVNVYARFARGFKSGGFNGETNVFFDPAAPAGCPAGATELCQPYRPEKVDSYE
LGVKTKLIGNDLVFNVAAFRDEHKDMQLAVFTAGLGAASVVRNAGAARIQGLEFELVA
RPVAGVTINGSLAFLDPKYKTFIDGGVNVADNRAFPHAPKTTAAAGIDWRVVEGDWGK
LNLYGDVSYVSKYYTFPYPLDSATDSDLNAHNTRSPGRTIVNLRATVSEIRLGGVEAS
LSGFVRNLTKEDSPSNFIDFGAGFGGMTLGYFPEPRTYGVTAGVKF"
misc_feature complement(321535..323730)
/locus_tag="PP1Y_Mpl3237"
/note="TonB-dependent siderophore receptor; Region:
TonB-siderophor; TIGR01783"
/db_xref="CDD:162535"
misc_feature complement(321535..323715)
/locus_tag="PP1Y_Mpl3237"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(323392..323418,323452..323484,
323512..323535,323578..323595,323632..323661,
323689..323715))
/locus_tag="PP1Y_Mpl3237"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(322768..322770,322849..322851))
/locus_tag="PP1Y_Mpl3237"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 324001..324681
/locus_tag="PP1Y_Mpl3250"
/db_xref="GeneID:10718164"
CDS 324001..324681
/locus_tag="PP1Y_Mpl3250"
/inference="similar to AA sequence:UniProt:B0TTW1"
/note="KEGG: swi:Swit_3359"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538240.1"
/db_xref="GI:334145031"
/db_xref="GeneID:10718164"
/translation="MSALCYAKCDFEREDNRVTARTIEARLDRLESLDAIRQLPAKYA
LALDMRDMDAMVSLFPTDVRVGRETSGRLALREYMDGTLRSPFTGTSHHIGGHIIEFD
DADHAHGIVYSKNEHETGDEWVIMQMMYVDDYVRQDDRWYFARRLPLYWYATDLNRPP
IGDSKMRWPDTEWAEGNFHKLFPSYEEFWARSGDHGGPVAEPAPLDKFIETMRRGKGA
PKVKVRAQ"
misc_feature 324106..324438
/locus_tag="PP1Y_Mpl3250"
/note="Nuclear transport factor 2 (NTF2-like) superfamily.
This family includes members of the NTF2 family,
Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
and the beta subunit of Ring hydroxylating dioxygenases.
This family is a classic example of...; Region: NTF2_like;
cd00531"
/db_xref="CDD:29628"
gene 324699..326450
/locus_tag="PP1Y_Mpl3259"
/db_xref="GeneID:10718165"
CDS 324699..326450
/locus_tag="PP1Y_Mpl3259"
/inference="protein motif:COG:COG1053"
/inference="similar to AA sequence:UniProt:A4XF69"
/note="KEGG: nar:Saro_3721"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538241.1"
/db_xref="GI:334145032"
/db_xref="GeneID:10718165"
/translation="MPPSPWGLRPEASVPEAGRDIRDWGLSIDAPLTLEDPETHDWDE
AADMIVVGLGGAGVAAALEGLERGLSVIALDQYDGGGSSAANGGVFYAGGGTPIQREA
GISDDAQRMEDYLRYEVGDVVSPETLRDFCEQSAGTVEWLQRHGAPFEASYWPKKTSY
PPLDKFLYHPDSSLAGPFRDLTPPAARGHRTVRRNGGKPWGLGAGIWEPLRQAALNRG
LVIHTQTEARQLALDSSGRVIGVRVERFIDPAIRKRYSRHIAAANKWIAMLSPTFPGA
RLTFAIGYRHLAKAKALAAAGRTSAWVRARRGVVLSAGGFICNPDMVRHFAPDYSAGL
PNGTLGDNGSGIMLGVSAGGKTALMERVSAWRFLSPPRAWGQALLVNGRGERYCNETW
YGARIGDEMVERNGGRGYIIMDRKLFRQSLRDAFGEGVLGFQRDITLVNAFFAAEKGP
TPAALAAKLGCDPALLAANIAAYNRAARGEKPDRFHKSPDEMAVLDRGPYYAIDASVD
ARMFPIACMTVGGLSVDEKSGAVRRREGEDIVPGLYAAGRNAVGICSNLYVSGLSYAD
CIYSGRRAARAISESGQ"
misc_feature 324774..326429
/locus_tag="PP1Y_Mpl3259"
/note="hypothetical protein; Validated; Region: PRK07121"
/db_xref="CDD:180854"
gene 326447..328087
/locus_tag="PP1Y_Mpl3272"
/db_xref="GeneID:10718166"
CDS 326447..328087
/locus_tag="PP1Y_Mpl3272"
/inference="protein motif:COG:COG2303"
/inference="similar to AA sequence:UniProt:Q11BZ9"
/note="KEGG: nar:Saro_3680"
/codon_start=1
/transl_table=11
/product="glucose-methanol-choline oxidoreductase"
/protein_id="YP_004538242.1"
/db_xref="GI:334145033"
/db_xref="GeneID:10718166"
/translation="MSANATQFDYVIVGGGVAGCVLAARLSEDPRVTVLLVEAGGRDG
SPLIAAPGGLLPIMMSGSHAWKYMSAPQAHLDGRVLYLPRGKVLGGGSSINGMAYDRG
MHSDYDRWAQAGNSGWSFAEVLPYFRRLETFHPANDAWHGQDGPIHVTRGDQDHPFAR
AFLAAGAEAGYHRNPDLNGARRDGFGAVDLTVHKGRRCSASSAYLRPAMKRANLTVLT
KTQTRKVLIENGCATGIMVRRNGQDSTIAARAEVILSAGAINSPHLLMLSGIGPAGHL
ATHGLPVVRDMPGVGQDLQDHLAAHVKRRSTKPWSMLRYLNPVYGSLAMGRYLLLRSG
PLASTGMSVAAFVRSDPALDEPDIKMLLVTALTSNNGRTLMPSHGFYAHINVARPEAR
GSVTLASADADAAPVIDQNYLGTENDRRVMREGVKIARRIFAQSAFDPMRGEELAPGR
QVQSDEEIDAFVRASAEADYHSVGTARMGSDPRAVVDPDLKVHGIDRLRVVDASVMPH
LPGGNTAIPVAMIAEKAADMIRGIAAPSPAKLPEEQAR"
misc_feature 326465..328063
/locus_tag="PP1Y_Mpl3272"
/note="choline dehydrogenase; Validated; Region: PRK02106"
/db_xref="CDD:179368"
misc_feature 327611..328021
/locus_tag="PP1Y_Mpl3272"
/note="GMC oxidoreductase; Region: GMC_oxred_C; pfam05199"
/db_xref="CDD:203202"
gene 328084..329181
/locus_tag="PP1Y_Mpl3283"
/db_xref="GeneID:10718167"
CDS 328084..329181
/locus_tag="PP1Y_Mpl3283"
/inference="protein motif:COG:COG1062"
/inference="similar to AA sequence:UniProt:A4XF27"
/note="KEGG: nar:Saro_3679"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase"
/protein_id="YP_004538243.1"
/db_xref="GI:334145034"
/db_xref="GeneID:10718167"
/translation="MKVAAMVCHSPNQPLVREELDLAPPGEDEVLIEIMANGLCHSDL
SQLEGKAAPYPFPVVVGHEGAGIVRAVGSAVTSVAVGDHAIAVALGECGRCRNCLSGK
TNLCELFLAEIATQETRFSLNGKPVWAYSGVGSLAQFVVMKERNVAKIRKDVPFHLAC
TIGCSVATGVGAAIHTARVAKGDSVAVFGLGGIGLNVVQGARLAGASRIIGVDINPER
EAQGQRFGMTDFVNSRETEPVTAIRALTDGGVDHAFECVGHAGLMEQAFDCTRVGWGC
CTVLGVPPDGEVMRVTPFALQLGRTVKGSFMGNVKGRSELPHLLDHYADGQLNLDDLV
THRLPMEKVNEGFALMKSGEAIRVVCSFQDD"
misc_feature 328084..329169
/locus_tag="PP1Y_Mpl3283"
/note="Zn-dependent alcohol dehydrogenases, class III
[Energy production and conversion]; Region: AdhC; COG1062"
/db_xref="CDD:31262"
misc_feature 328084..329160
/locus_tag="PP1Y_Mpl3283"
/note="Medium chain reductase/dehydrogenase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR; cl16912"
/db_xref="CDD:211475"
misc_feature order(328201..328209,328216..328218,328573..328575,
328585..328587,328648..328665,328720..328725,
328735..328737,328780..328782,328849..328854,
328921..328926,328996..329004)
/locus_tag="PP1Y_Mpl3283"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:176178"
gene 329531..330034
/locus_tag="PP1Y_Mpl3293"
/db_xref="GeneID:10718168"
CDS 329531..330034
/locus_tag="PP1Y_Mpl3293"
/inference="similar to AA sequence:UniProt:A5VBF8"
/note="KEGG: swi:Swit_3278"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538244.1"
/db_xref="GI:334145035"
/db_xref="GeneID:10718168"
/translation="MYLVDERASPLPSAAADPALRALIDERAIMRGLARFARVLDSKD
WNALGDVFAQDVAFDYGTGEERKGLAALRDNMTRFLDNCGPTQHLIGSVTVDLAGDRA
VSRSYVQARHQRAGDAAGAVFDSNGEYIDCWERRPEGWRIVRRDANWQTHAGDPAILS
AGSGDLG"
misc_feature 329627..329980
/locus_tag="PP1Y_Mpl3293"
/note="Nuclear transport factor 2 (NTF2-like) superfamily.
This family includes members of the NTF2 family,
Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
and the beta subunit of Ring hydroxylating dioxygenases.
This family is a classic example of...; Region: NTF2_like;
cd00531"
/db_xref="CDD:29628"
gene complement(330042..330839)
/locus_tag="PP1Y_Mpl3300"
/db_xref="GeneID:10718169"
CDS complement(330042..330839)
/locus_tag="PP1Y_Mpl3300"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XF64"
/note="KEGG: nar:Saro_3716"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538245.1"
/db_xref="GI:334145036"
/db_xref="GeneID:10718169"
/translation="MEGRLNGRVALVTGAADGIGHGTARRMAAEGASVLVVDFDAERG
RHVAAELREMGAGAEFIACDVTDRAQVFAAVERCVERFGKIDILVNNAYRGQGQARIE
AKTDAIFASAMDMCLYAAKWSMEAAFPIMRKQGWGRIINVASLNGVNAHMGTAEYNAG
KEALRAYSRTAAREWAAHGICVNIVCPAAKSASYRRFEEMQPQVAAATAAANPMGRMG
DPEADVGGVMVFLASEDARYLTGNTLFVDGGGHINGVPWVPDLGPED"
misc_feature complement(330093..330830)
/locus_tag="PP1Y_Mpl3300"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(330099..330812)
/locus_tag="PP1Y_Mpl3300"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(330258..330263,330267..330269,
330273..330281,330357..330359,330369..330371,
330408..330416,330495..330497,330561..330569,
330645..330653,330720..330728,330783..330794,
330798..330800))
/locus_tag="PP1Y_Mpl3300"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(330357..330359,330369..330371,
330408..330410,330492..330494))
/locus_tag="PP1Y_Mpl3300"
/note="active site"
/db_xref="CDD:212491"
gene complement(330868..331425)
/locus_tag="PP1Y_Mpl3310"
/db_xref="GeneID:10718170"
CDS complement(330868..331425)
/locus_tag="PP1Y_Mpl3310"
/inference="similar to AA sequence:UniProt:A4XF63"
/note="KEGG: nar:Saro_3715"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538246.1"
/db_xref="GI:334145037"
/db_xref="GeneID:10718170"
/translation="MIRIAIPADQGHDPYGFAARNHARTIMAAADAFSKAVYRDSILT
LREFEGGRSRIAQINGCIICQQFRAARDASAMFAATGQRADHLVIDNGPAPDEAFYAE
VESWREAKVFSDRERLAIEFAERFAQEPKVLAQDEEYWTRAHALFSDAEIVDLSHCVA
AWIGLGRIAHVLGFDSICMPFASAD"
misc_feature complement(330907..>331344)
/locus_tag="PP1Y_Mpl3310"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG2128"
/db_xref="CDD:32311"
gene complement(331448..332665)
/locus_tag="PP1Y_Mpl3320"
/db_xref="GeneID:10718171"
CDS complement(331448..332665)
/locus_tag="PP1Y_Mpl3320"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:A4XF72"
/note="KEGG: nar:Saro_3724"
/codon_start=1
/transl_table=11
/product="major facilitator transporter"
/protein_id="YP_004538247.1"
/db_xref="GI:334145038"
/db_xref="GeneID:10718171"
/translation="MDGITTGTRRAMALRGFLCQNVVVGAAFGAFGITVLPVQAHFGV
GRGMATFGLALAVLVMGVGAPLAAGVIGRFGLRVAILAGVILSGLGYLVLGLAPLLGE
AGMGLVLFAYALPIGLGLAFVPFSSAMLASRWFQPNPGPALGFVSMPVLVALLPVAGT
PVIAALGLSSFYFLLAGLHLLLLPLALGIGEPLAGVSGLGHDDTPALAMRTIFRRPAF
WVLVCGAGTLTSVGITGMTHLVAFGVERGLSDQHAALLVTFTGGASVAGSLVVGMLCG
WLGAARTLALIGVLTALGWSALLATSDLPVMVSVVLLIGAGGAGVFPAVNVLAGQVFG
LAALHRVIGLYAIANLPFTFALPPLSGVLHDVAGGYAPVAGMLIAASFAVSMLFFAFS
LASGRPLAVAEPA"
gene complement(332682..333155)
/locus_tag="PP1Y_Mpl3334"
/db_xref="GeneID:10718172"
CDS complement(332682..333155)
/locus_tag="PP1Y_Mpl3334"
/inference="similar to AA sequence:UniProt:A4XF62"
/note="KEGG: nar:Saro_3714"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538248.1"
/db_xref="GI:334145039"
/db_xref="GeneID:10718172"
/translation="MLPLQEISDRLEIQDLLARYSFAIDERDWDALDEVFTSDAVIDY
RETGGARGTLAQIKAWLPLAMERFPLFQHMVATTRLDLDGDRATSRTILFNPMVYRKD
DGAEQVFFIGLWYRDKLVRTEKGWRIAERYEEMGYAHNVPQMPAIPTIDDVPDRI"
misc_feature complement(332763..333143)
/locus_tag="PP1Y_Mpl3334"
/note="SnoaL-like domain; Region: SnoaL_4; pfam13577"
/db_xref="CDD:205755"
gene complement(333159..333764)
/locus_tag="PP1Y_Mpl3338"
/db_xref="GeneID:10718173"
CDS complement(333159..333764)
/locus_tag="PP1Y_Mpl3338"
/inference="similar to AA sequence:UniProt:A5VBK5"
/note="KEGG: swi:Swit_3325"
/codon_start=1
/transl_table=11
/product="ethyl tert-butyl ether degradation EthD"
/protein_id="YP_004538249.1"
/db_xref="GI:334145040"
/db_xref="GeneID:10718173"
/translation="MIKSLCALARKPGTTRGQFQSYYEEKHAPLAAGLFPFSGYVRNH
LIDAPDFGWDTISEFWNDDMAGTAALLAGTVGETMRADEEQFMDRTKVVPARVEEIVL
SPGARADALGLRSALLVTGTRASADIHAQVIEQVRELAEHSEGVSVDLVDTGTQFPAS
AVIWLPGEPSALPDLSGLAVTALLVRRCGTAVTELLGTRRS"
misc_feature complement(333504..333731)
/locus_tag="PP1Y_Mpl3338"
/note="EthD domain; Region: EthD; pfam07110"
/db_xref="CDD:203582"
gene complement(333838..336408)
/locus_tag="PP1Y_Mpl3347"
/db_xref="GeneID:10718174"
CDS complement(333838..336408)
/locus_tag="PP1Y_Mpl3347"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:A4XF61"
/note="KEGG: nar:Saro_3713"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538250.1"
/db_xref="GI:334145041"
/db_xref="GeneID:10718174"
/translation="MHDLSCVGVLSRRMSSAMLAGVAWGAILVPGQAWAQDAPQGANE
ADRGIGEIIVTANRREERGQDVPISITALSPQRLEQQSITKEQDLQATVPSLVVGPNG
QGSRDSNSFTIRGQGATFQASPGVVVYLNEVPLASGITLSQQGGPGNFVDLENMQVLA
GPQGTLFGRNTTGGAVLLVPKKPTDELGGWIKGELGNYKRRNVEGAVNLPVVEDKLSV
RVVGAYHDRDGYTRDVVWNKDRDNEHWYSGRIGILAKPTDAIRNYTMIFGSNSDNNGA
GLIHRGFNIAGLQAVGFCSDPPNPLSPIGVPCDVYRAATAQADALGTRQTAFSIDTFS
KTKTWGASNTTDIDLSDEITLRNIVSYQKMKVGYRYDGDATVLQQHDNDPGVLPAPGV
VTLPGTTFPLTYINATLDRETPRDNFRTWTEELQLQGNMLDGKLNWTIGGFYFNQKPD
GRQSTNSVVYCPALYTGFCTANHSEYGNSTVSKALYGQATLDFGAVSPSLDGLRLTGG
YRQTWDHVSGFATQYNFDASLPAGMVICGRDTSLVVPLETALQDCRFDGSKKTSSPSW
LVGLDYKVTSGVMIYGKVSHGYKAGGFNTYAVYFGENGDPDTRTFDPEKVTTYEAGFK
SDFHLGTVPFRLNVTGYHTQYKGIQRATGDYNPRTNVSGARTLNADARINGVEVEAMM
RPFPGIEIGGNFSYTDAKYKKYEYQTATGAVACNGVIAPGGIADSSCLDFQYVSPYIW
SFHVAAEQPLGGNAGTLSFFANYSHTSRQFTEAINLPSQQPGAYLEPFGLLNMSLDWK
NVYGSGLDVGVFGTNLVDKSYRISNTDVYQQGALLYWSTLYGEPRMYGLRLKYTFGGG
"
misc_feature complement(333850..336381)
/locus_tag="PP1Y_Mpl3347"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature complement(333850..336204)
/locus_tag="PP1Y_Mpl3347"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(335869..335895,335929..335940,
335941..335952,336004..336027,336061..336078,
336118..336147,336175..336204))
/locus_tag="PP1Y_Mpl3347"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(335167..335169,335311..335313))
/locus_tag="PP1Y_Mpl3347"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene complement(336914..337681)
/locus_tag="PP1Y_Mpl3374"
/db_xref="GeneID:10718176"
CDS complement(336914..337681)
/locus_tag="PP1Y_Mpl3374"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:Q396S9"
/note="KEGG: swi:Swit_3287"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538251.1"
/db_xref="GI:334145042"
/db_xref="GeneID:10718176"
/translation="MATFPKGCALLFGGSGGIGRGVARTFAESGSDIAVVYRSKRDVA
DEVADHARAQGRAASVHAADVTDPGQVCAALEAAVAEHGRVHTVVWGAGPLVNQRYLA
ETPLAEWRHAFEVEVHGFFTAAQAAIPHMREQGGGSFVTLGSAGHDWWPARDGMSVAV
KASNEQLVKGIAKEEGRHNIRANSVLVGVIDAGQLHELTRQGQFDEAWVNETHKLLCL
KRWGTAEEIGHACVYFASNEGAYTTGQSISVSGGFGV"
misc_feature complement(336926..337618)
/locus_tag="PP1Y_Mpl3374"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(336935..337618)
/locus_tag="PP1Y_Mpl3374"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(337103..337108,337112..337123,
337199..337201,337214..337216,337250..337258,
337337..337339,337403..337411,337487..337492,
337496..337498,337565..337573))
/locus_tag="PP1Y_Mpl3374"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(337199..337201,337214..337216,
337250..337252,337334..337336))
/locus_tag="PP1Y_Mpl3374"
/note="active site"
/db_xref="CDD:212491"
gene complement(337781..338860)
/locus_tag="PP1Y_Mpl3383"
/db_xref="GeneID:10718177"
CDS complement(337781..338860)
/locus_tag="PP1Y_Mpl3383"
/inference="protein motif:COG:COG4638"
/inference="similar to AA sequence:UniProt:A4XEZ7"
/note="KEGG: nar:Saro_3666"
/codon_start=1
/transl_table=11
/product="Rieske (2Fe-2S) domain-containing protein"
/protein_id="YP_004538252.1"
/db_xref="GI:334145043"
/db_xref="GeneID:10718177"
/translation="MATTQEYGLGEFDFPRGWFMIGEAKEATKIPAAIRYFGKDLVLY
RGESGQPYVVDAYCPHMGAHLAKNTTSYIVRDGEHVQGEAIRCPFHGWAFGADGQCKH
IPYSDFIPKAAKLRTYPVVERAGILWMWHDPEALEPDVDLPDFGGHYDEPGWVEWKVD
YMGDLEVHGIEIVDNMADFGHFIPIHGAKDWQYFANEFKGHIVHQYYSAGHRTLTAAD
EDQLVLDTWYEGPGFLQSEMAGAFDSFIMIANTPIEDGKTRSWHALMVKVHDGSRETT
DADRTIAFEYQEGSRLAFAQDVEIWANKRACLNPLAIPNDGPYGKVRAWYKQFFNSRE
KAREMQKRVNGVVVTLDKRPGNKAA"
misc_feature complement(337862..338830)
/locus_tag="PP1Y_Mpl3383"
/note="Phenylpropionate dioxygenase and related
ring-hydroxylating dioxygenases, large terminal subunit
[Inorganic ion transport and metabolism / General function
prediction only]; Region: HcaE; COG4638"
/db_xref="CDD:34257"
misc_feature complement(338444..338812)
/locus_tag="PP1Y_Mpl3383"
/note="Rieske domain; a [2Fe-2S] cluster binding domain
commonly found in Rieske non-heme iron oxygenase (RO)
systems such as naphthalene and biphenyl dioxygenases, as
well as in plant/cyanobacterial chloroplast b6f and
mitochondrial cytochrome bc(1) complexes; Region: Rieske;
cl00938"
/db_xref="CDD:207253"
misc_feature complement(order(338579..338581,338585..338587,
338591..338596,338600..338602,338678..338683,
338687..338689))
/locus_tag="PP1Y_Mpl3383"
/note="iron-sulfur cluster [ion binding]; other site"
/db_xref="CDD:58538"
misc_feature complement(order(338585..338587,338591..338593,
338600..338602,338678..338683,338687..338689))
/locus_tag="PP1Y_Mpl3383"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:58538"
gene 338906..339859
/locus_tag="PP1Y_Mpl3386"
/db_xref="GeneID:10718178"
CDS 338906..339859
/locus_tag="PP1Y_Mpl3386"
/inference="similar to AA sequence:UniProt:A4XF13"
/note="KEGG: nar:Saro_3665"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_004538253.1"
/db_xref="GI:334145044"
/db_xref="GeneID:10718178"
/translation="MPVYRAYPLHAKALSYAHCLCKYARAMHWDDLRYYLAAVRAGSY
TAAGRRLGVNRTTVGRRIEALEEAVGIPLFHETPLGHEPTRQGAHLLETAARIEAEVE
ALQARIAPSVQHEGHVRIAGSGGIVAEFAAELLAFQEVMPRVSVELLGELDPLDAITY
RRADLGLAIIRKPPRRMAGIEIATMSQARYGLRGGKRARQLGWGHELDAAQPGQWITA
NPSGDAAEALGLTTFNSWPQMKQAVLSGFGTAKLWCFAADAEPMLERLDEPDPRDDYP
LWLIHRAKAPPSPALSGLIDYLGKALAARLCDQTASRASSS"
misc_feature 338984..339823
/locus_tag="PP1Y_Mpl3386"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature 338990..339166
/locus_tag="PP1Y_Mpl3386"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 339329..339814
/locus_tag="PP1Y_Mpl3386"
/note="LysR substrate binding domain; Region:
LysR_substrate; pfam03466"
/db_xref="CDD:202651"
gene 340575..341756
/locus_tag="PP1Y_Mpl3410"
/db_xref="GeneID:10718179"
CDS 340575..341756
/locus_tag="PP1Y_Mpl3410"
/inference="similar to AA sequence:UniProt:A4XF12"
/note="KEGG: nar:Saro_3664"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538254.1"
/db_xref="GI:334145045"
/db_xref="GeneID:10718179"
/translation="MTNTISPTKALDRETLLQAARERTGLVDFGDGWFLEPMDRYIAA
ANAEARLTESGLAAQTEVIVKGLASRLRMVEDIRQHPEILEEKVEVAAVILGLPRTGS
TIFHRLLSSAPGMTAIRWYEAQNFAPFPGEERGHPVERRAYAQAMIDGWLQAAPELAS
IHPLDPDAPDEEILILGQMFVSTMVEGMTHVPSFSRWLDDYDQSHGHEDLKTILKYLQ
WQAPERRGTKWILKSPSNLPYAELAAEAFPDALLVMTHRDPIDIVPSYVSMEAALYKL
SATLTDEEVGRFWFPRLVQWMRRFEEARIRIGEDRFIDIDYRLVLRSPLEQAHRVLER
IGVAVDEKMEAALAEFMAGNKREQRPSHDYSLERFGIDEADVRREFAAYRARYVEGAK
A"
gene complement(341874..343595)
/locus_tag="PP1Y_Mpl3421"
/db_xref="GeneID:10718180"
CDS complement(341874..343595)
/locus_tag="PP1Y_Mpl3421"
/inference="protein motif:COG:COG1053"
/inference="similar to AA sequence:UniProt:A5VBN8"
/note="KEGG: nar:Saro_3626"
/codon_start=1
/transl_table=11
/product="fumarate reductase/succinate dehydrogenase
flavoprotein domain-containing protein"
/protein_id="YP_004538255.1"
/db_xref="GI:334145046"
/db_xref="GeneID:10718180"
/translation="MHSLASEKTRAAAGWDKEVDVLVVGSGAGGLMSGLVAASNRAEV
LIIEKAAEWGGTSSTSGGGIWIPGSDQAKAAGFEDNLDDAFKYVRALSADNVPDENIR
AYVDNAASMLRWLTAHTGVQYLALPYPDYHAENPGGSAQGFRTHLPLAFDGKKLGKDV
KTQRFPSPAASLFGYLQWTFAETHQLLYRTKGWIAGLALNMGKYWFDWPFRFTSRKDR
RLTLGNALTGALRVALNEKGVPLWLETPMKQLVREDGRVVGVVVERGGKLLRIRARKG
VVLAAGGFDKNQDMRDQNAPLYPTAQYSGGVTSNTGDSIRAGVEVGAGTMNLQSAWAA
PVFYVPGEDRGRLCTIERALPGCIMVNRKGERYLNEAASYHVVGQQMAARERDHGDAS
PSWMVFDFRYRHQFPMGPLLPLMPDWMQSAGVRKILKKARTIEALAAKMGVDPDRLSA
TVARFNEYAPKGEDPDFHRGEPAYDKMYGDPRNQPNPCLRALTRAPFYAMPIYPGDIG
TNGGLTTNAKAQVVDEAGAPIAGLYAVGNNAASSMGESYPGAGVTLGPGLTFGYLAAR
DMTGAND"
misc_feature complement(341877..343559)
/locus_tag="PP1Y_Mpl3421"
/note="3-ketosteroid-delta-1-dehydrogenase; Reviewed;
Region: PRK12844"
/db_xref="CDD:183787"
gene complement(343595..344314)
/locus_tag="PP1Y_Mpl3436"
/db_xref="GeneID:10718181"
CDS complement(343595..344314)
/locus_tag="PP1Y_Mpl3436"
/EC_number="1.1.1.184"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:Q396K6"
/note="KEGG: bur:Bcep18194_B1491"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538256.1"
/db_xref="GI:334145047"
/db_xref="GeneID:10718181"
/translation="MNVVLADRDADVLADVAGPLGDKAIAVAADVTDPASVDALADAA
WDRFGGVDLLFNNAGVLVTGQVWDIPKRDWDKAWAVNVDGVLNGLRTFVPRMLAAGTP
SRIVNTSSIGGFLPSPLMSPYTSTKFAVVALTESLLHELTAIGAPIAVSLLAPGPVKS
GIFRETPPEEAKGFHDTLTAMLNEHGLTGDEFAPLVLDAIERGEYWIIPQPLAFDDGF
AARNAQITSRQTPHFHLVRDQ"
misc_feature complement(343670..344257)
/locus_tag="PP1Y_Mpl3436"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(343832..343837,343841..343852,
343934..343936,343946..343948,343985..343993,
344075..344077,344138..344146,344222..344230))
/locus_tag="PP1Y_Mpl3436"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(343934..343936,343946..343948,
343985..343987,344072..344074))
/locus_tag="PP1Y_Mpl3436"
/note="active site"
/db_xref="CDD:212491"
gene 344559..345320
/locus_tag="PP1Y_Mpl3441"
/db_xref="GeneID:10718183"
CDS 344559..345320
/locus_tag="PP1Y_Mpl3441"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XF11"
/note="KEGG: nar:Saro_3663"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538257.1"
/db_xref="GI:334145048"
/db_xref="GeneID:10718183"
/translation="MNDMKGKVALITGAGQGIGQGIALAMAAAGADVVLTGRTLSKVE
ASARLVEERGVRALALSCDVKNAEDLRAVVDAAVGKFGGIDVLVNNAQEVPLGMLDDV
TDEAFLNGFTSGPLASLRLMKLVKPSMVARGGGTIFNFASSAGIRWDMAFYGAYGAVK
QATRALTRAAASEWGRAGIRVLTIAPHAESPGLKGWIENNPDEAEAFFKTIPLGRIGK
LEEDIGRAVVALCGPDMGYLTGATVPLDGGQANFD"
misc_feature 344565..345302
/locus_tag="PP1Y_Mpl3441"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05557"
/db_xref="CDD:180126"
misc_feature 344655..345296
/locus_tag="PP1Y_Mpl3441"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(344667..344675,344742..344750,344826..344834,
344895..344897,344976..344984,345024..345026,
345036..345038,345114..345122,345126..345131)
/locus_tag="PP1Y_Mpl3441"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(344898..344900,344982..344984,345024..345026,
345036..345038)
/locus_tag="PP1Y_Mpl3441"
/note="active site"
/db_xref="CDD:212491"
gene 345334..346047
/locus_tag="PP1Y_Mpl3451"
/db_xref="GeneID:10718184"
CDS 345334..346047
/locus_tag="PP1Y_Mpl3451"
/inference="similar to AA sequence:UniProt:A4XF10"
/note="KEGG: nar:Saro_3662"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538258.1"
/db_xref="GI:334145049"
/db_xref="GeneID:10718184"
/translation="MEKIVCALWAAEGEPRTDFAQRLLETLPVTLKKAGASGIRLNLR
DEAVAPAAGLIQQSQEPQQDALVQFWLPSANARFRGAVDKVLAAHSARFALWLVCEST
IIPNTAHPLAEGRRTWGWSQASFITFRPDLTREEAIAHWHGHHTRVAIDVQANFEYVQ
NIVVRPLTEGAPAYDAFVEECFSPEAMTDSPAFFDAAGDEEKFNRNLKDMMDSCTAFI
DFARVDIIPTSQFDFRSLD"
misc_feature 345721..345942
/locus_tag="PP1Y_Mpl3451"
/note="EthD domain; Region: EthD; pfam07110"
/db_xref="CDD:203582"
gene 346074..346991
/locus_tag="PP1Y_Mpl3459"
/db_xref="GeneID:10718185"
CDS 346074..346991
/locus_tag="PP1Y_Mpl3459"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A0PRU2"
/note="KEGG: nar:Saro_3660"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538259.1"
/db_xref="GI:334145050"
/db_xref="GeneID:10718185"
/translation="MQSASATQHERNTPMSDRKIALVTGASRGAGAGIARGFGEMGYK
VYVTGRTVTPGNAKGWDGSVLPGTVSETAAKINELGGEGVPIVCDHADDAQVARLFEQ
IADENGGKLDVLVNNAAYMHHQLIEKMPFWEKDLDAQKILDVGLRSAYVASWHAAHLM
VPRGSGCIAMTSSFGATCYMHGPAYGAQKAGLDKLAHDMEHDFRGTGVIAVSLWLGMQ
LTERAQISAKTHPEQYEQMLAMAENPEFSAHVIDAIDRAPNRDDLSGQTLIVAEIAKE
LGISDRGNERISHREMLGSPRTKNPAAIY"
misc_feature 346116..346883
/locus_tag="PP1Y_Mpl3459"
/note="Dehydrogenases with different specificities
(related to short-chain alcohol dehydrogenases) [Secondary
metabolites biosynthesis, transport, and catabolism /
General function prediction only]; Region: FabG; COG1028"
/db_xref="CDD:31231"
misc_feature 346128..346916
/locus_tag="PP1Y_Mpl3459"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(346146..346148,346152..346157,346161..346163,
346218..346226,346422..346427,346431..346433,
346584..346592,346626..346628,346638..346640,
346716..346727)
/locus_tag="PP1Y_Mpl3459"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(346506..346508,346590..346592,346626..346628,
346638..346640)
/locus_tag="PP1Y_Mpl3459"
/note="active site"
/db_xref="CDD:187535"
gene 346991..347515
/locus_tag="PP1Y_Mpl3469"
/db_xref="GeneID:10718186"
CDS 346991..347515
/locus_tag="PP1Y_Mpl3469"
/inference="similar to AA sequence:UniProt:B4EMS1"
/note="KEGG: bcj:BCAM1938"
/codon_start=1
/transl_table=11
/product="glyoxalase/bleomycin resistance
protein/dioxygenase superfamily protein"
/protein_id="YP_004538260.1"
/db_xref="GI:334145051"
/db_xref="GeneID:10718186"
/translation="MTKRVPRAIDQVAWIVDDLDAAIVRRLHADGTGPWTVFRNVEMA
GTYLGRETKVTMDVGLAYAGDLQLELIAPTNSAPSPYRGKDGKARIGLHHVAYVVEQL
EEAVAEARAAGLDPVFEAANAAVRVAYLQHPAEPGALTELIEGEGMRALMKQGIAEAA
NWGGTDPIREISAS"
misc_feature 347015..347422
/locus_tag="PP1Y_Mpl3469"
/note="This domain superfamily is found in a variety of
structurally related metalloproteins, including the type I
extradiol dioxygenases, glyoxalase I and a group of
antibiotic resistance proteins; Region: Glo_EDI_BRP_like;
cl14632"
/db_xref="CDD:211465"
misc_feature order(347021..347023,347033..347035,347162..347164,
347195..347197,347201..347203,347270..347272,
347375..347377,347405..347407,347411..347413)
/locus_tag="PP1Y_Mpl3469"
/note="active site"
/db_xref="CDD:211348"
misc_feature order(347021..347023,347270..347272,347411..347413)
/locus_tag="PP1Y_Mpl3469"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:211348"
gene 347685..349100
/locus_tag="PP1Y_Mpl3478"
/db_xref="GeneID:10718187"
CDS 347685..349100
/locus_tag="PP1Y_Mpl3478"
/EC_number="1.14.13.70"
/inference="protein motif:COG:COG2124"
/inference="similar to AA sequence:UniProt:A4XF07"
/note="assigned by KAAS to KEGG Orthology:K05917
cytochrome P450, family 51 (sterol 14-demethylase)"
/codon_start=1
/transl_table=11
/product="cytochrome P450, family 51"
/protein_id="YP_004538261.1"
/db_xref="GI:334145052"
/db_xref="GeneID:10718187"
/translation="MASTAHTSRPLPLVGGASPVIGHLAQFFRDPVSVLKRGYATKGR
LFALNLMGRRMNVMLGPEHNRFFFEETDKLLSIRESMPFFLKMFSPEFYSFAEMDEYL
RQRAIIMPRFKAASMKQYVPIMAEEALALVKRLGDEGTFDLIPTLGPVVMDIAAHSFM
GREFHKKLGHEFFDLFRDFSAGMEFVLPLWLPTRKQIRSQRAKKKLHTILQDWIDNRR
ANPVDPPDFFQTMIASTYPDGTPVPDETIRHLILLLVWAGHETTAGQVSWALADLLQN
PDYLQTIRAEIAAVMGSDDGSAFSWEQALAMGKMDFSLRETERLHPVAYILSRKASAD
IEREGYRIRKGEFVLLAPSVTHRMEETFHNPDAYDPERFNPDNPAAQLESNSLIGFGG
GVHRCAGVNFARMEMKVLIAILLQHYDMELIDEVRPISGASTYWPAQPCRVRYRKRNR
GDARPADTATLARAAGCPAHA"
misc_feature 347703..349031
/locus_tag="PP1Y_Mpl3478"
/note="Cytochrome P450 [Secondary metabolites
biosynthesis, transport, and catabolism]; Region: CypX;
COG2124"
/db_xref="CDD:32307"
misc_feature 347739..348968
/locus_tag="PP1Y_Mpl3478"
/note="Cytochrome P450; Region: p450; pfam00067"
/db_xref="CDD:200971"
gene 349113..349445
/locus_tag="PP1Y_Mpl3486"
/db_xref="GeneID:10718188"
CDS 349113..349445
/locus_tag="PP1Y_Mpl3486"
/inference="protein motif:COG:COG0633"
/inference="similar to AA sequence:UniProt:A4XF06"
/note="KEGG: nar:Saro_3658"
/codon_start=1
/transl_table=11
/product="ferredoxin"
/protein_id="YP_004538262.1"
/db_xref="GI:334145053"
/db_xref="GeneID:10718188"
/translation="MAKVTFIQPDGTPRECVNFEGMTLMQLGVANLVEGIDALCGGMM
QCATCHCWIDPAWIEITGRAGEDERAMLESIEGVEIRPESRLTCQIQLGEELDGLVVR
VPPEQPGV"
misc_feature 349122..349424
/locus_tag="PP1Y_Mpl3486"
/note="2Fe-2S iron-sulfur cluster binding domain.
Iron-sulfur proteins play an important role in electron
transfer processes and in various enzymatic reactions. The
family includes plant and algal ferredoxins, which act as
electron carriers in photosynthesis...; Region: fer2;
cl00159"
/db_xref="CDD:206870"
gene complement(349486..350274)
/locus_tag="PP1Y_Mpl3491"
/db_xref="GeneID:10718189"
CDS complement(349486..350274)
/locus_tag="PP1Y_Mpl3491"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:Q3IE74"
/note="KEGG: nar:Saro_3667"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538263.1"
/db_xref="GI:334145054"
/db_xref="GeneID:10718189"
/translation="MKRLEGKVALVTGGSRGIGEGIVRRFVEEGAKVMITDVLADAGE
ALAAELGEGAAFTRHDVTSRAEWANAVARTEEEFGRLDVLVNNAGVIVFKAFDDLTES
EIDKLIDVNLKGVINGCHAVVPALERAGGGAIVNMSSADGISGANGVTVYCATKFGVR
GLTKALAMELGPRKIRVNSIHPGGIYTPLANPMNVPKEEYDKGYWIYPAQFAGEPKDI
GAAAAYLASEDARYCMGTELSVDGGLNAGHYYMGMPGSPTPPQG"
misc_feature complement(349534..350271)
/locus_tag="PP1Y_Mpl3491"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(349543..350271)
/locus_tag="PP1Y_Mpl3491"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(order(349720..349731,349807..349809,
349819..349821,349858..349866,350008..350016,
350158..350166,350221..350223,350227..350232,
350236..350238))
/locus_tag="PP1Y_Mpl3491"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(349807..349809,349819..349821,
349858..349860,349942..349944))
/locus_tag="PP1Y_Mpl3491"
/note="active site"
/db_xref="CDD:187535"
gene 350406..351260
/locus_tag="PP1Y_Mpl3498"
/db_xref="GeneID:10718190"
CDS 350406..351260
/locus_tag="PP1Y_Mpl3498"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XF05"
/note="KEGG: nar:Saro_3657"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538264.1"
/db_xref="GI:334145055"
/db_xref="GeneID:10718190"
/translation="MNQETPGPPGVSFDFDGKNILVTGAGAGIGRAIADAFHAAGGSV
FAAEIDEGLCSDLEASGMIAIEGDVCAPDFPAMAGARIEQAGGKLDVLVNNVGHFVHP
RPFSMLTNAQANEVLDVNLGQLLRMTSTMLPLLRKAAPGSSIVNVTSIEAYRGIPGCS
VYAAAKAGIAGFTKSLALELGPEGIRVNDIAPETTDTPQVPLDFMIPPESRVHEDKWI
PLGRLGRPEDCAGAALYLASPLASWVTGTAIHVDGGALAAAGWTRTQDGEWTVVPLVT
GNGIRIPS"
misc_feature 350445..351173
/locus_tag="PP1Y_Mpl3498"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature 350463..351161
/locus_tag="PP1Y_Mpl3498"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(350475..350477,350481..350492,350547..350555,
350604..350612,350688..350696,350760..350762,
350844..350852,350889..350891,350901..350903,
350979..350990,350994..350999)
/locus_tag="PP1Y_Mpl3498"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(350763..350765,350850..350852,350889..350891,
350901..350903)
/locus_tag="PP1Y_Mpl3498"
/note="active site"
/db_xref="CDD:212491"
gene 351257..351682
/locus_tag="PP1Y_Mpl3509"
/db_xref="GeneID:10718191"
CDS 351257..351682
/locus_tag="PP1Y_Mpl3509"
/inference="similar to AA sequence:UniProt:A4XF04"
/note="KEGG: nar:Saro_3656"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538265.1"
/db_xref="GI:334145056"
/db_xref="GeneID:10718191"
/translation="MNAADTATLAALRLACETYAAGADRRDKTLWRSVLSEHCVIEGP
GFRIEGCENNLGSLDMLGKMFRKTRHIVHQIHAEVDGDEAVSETYCTADHLMRESDEI
LSWSLRYKDLWRREGEGWRIAHRRLEIDWEETRPVRVQS"
misc_feature 351308..351634
/locus_tag="PP1Y_Mpl3509"
/note="SnoaL-like domain; Region: SnoaL_4; pfam13577"
/db_xref="CDD:205755"
gene 351679..352488
/locus_tag="PP1Y_Mpl3513"
/db_xref="GeneID:10718192"
CDS 351679..352488
/locus_tag="PP1Y_Mpl3513"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XF03"
/note="KEGG: nar:Saro_3655"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538266.1"
/db_xref="GI:334145057"
/db_xref="GeneID:10718192"
/translation="MSGALSGQTALVTGATGAIARASAIALARDGAHLVLMARRPEGL
EQARAEIAAAVPGTHIALEVGDCIDSDAVARACRAAWVIAERLDIVFATVGGGSFAPI
LDVTPEALRKDFELNVISAHHALRHAVPLMPDGGSLVFLSSGAAPLTFPGLSSYSVSK
AGLEALVRSAADELGWRGIRVNAVRPGLTRSDSTGSMFDAPETLEKFLPEYPLGRLGE
AEDMAGAVRYLAGPESAWVTGQCIAVDGGNLLRRSPNLGIASPSKSGVHQS"
misc_feature 351691..352419
/locus_tag="PP1Y_Mpl3513"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature 351775..352413
/locus_tag="PP1Y_Mpl3513"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(351790..351798,351871..351879,351955..351963,
352024..352026,352099..352107,352144..352146,
352156..352158,352234..352245,352249..352254)
/locus_tag="PP1Y_Mpl3513"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(352027..352029,352105..352107,352144..352146,
352156..352158)
/locus_tag="PP1Y_Mpl3513"
/note="active site"
/db_xref="CDD:212491"
gene 352485..353402
/locus_tag="PP1Y_Mpl3523"
/db_xref="GeneID:10718193"
CDS 352485..353402
/locus_tag="PP1Y_Mpl3523"
/inference="protein motif:COG:COG0451"
/inference="similar to AA sequence:UniProt:Q471L4"
/note="KEGG: nar:Saro_3654"
/codon_start=1
/transl_table=11
/product="NAD-dependent epimerase/dehydratase"
/protein_id="YP_004538267.1"
/db_xref="GI:334145058"
/db_xref="GeneID:10718193"
/translation="MSKNILVVGGTGGLGGHAAIYLSGLGHQVSVAGRNVPNPDTPMA
QLPFLKGDYVAGEFTPARLEGFDWVVFAAGNDPRHIPEGSDYAAHFMRANGEAIPAFF
ADARKAGVSRAIQLGSFYPQASPELVAGNVYIQSRKAACEGARAQGREGFDVISVNAP
FMVGTVPGLPSAIFEPYVQWAQGLIPIEHYAPPGGTNFMSFRSLSEAIAGALERGEPG
KAYLVGDENLSFRAYFQLFFDAVGSKVRVEERDAELPLLPDVAIPQGRGNTIAYEPNE
DEAALLGYTRNDIANAVREIVAQFAAQAA"
misc_feature 352533..353249
/locus_tag="PP1Y_Mpl3523"
/note="Nucleoside-diphosphate-sugar epimerases [Cell
envelope biogenesis, outer membrane / Carbohydrate
transport and metabolism]; Region: WcaG; COG0451"
/db_xref="CDD:30800"
misc_feature <352797..>353216
/locus_tag="PP1Y_Mpl3523"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(352836..352838,352881..352883,352893..352895)
/locus_tag="PP1Y_Mpl3523"
/note="active site"
/db_xref="CDD:187535"
gene 353422..354354
/locus_tag="PP1Y_Mpl3531"
/db_xref="GeneID:10718195"
CDS 353422..354354
/locus_tag="PP1Y_Mpl3531"
/inference="protein motif:COG:COG0657"
/inference="similar to AA sequence:UniProt:Q397N4"
/note="KEGG: nar:Saro_3653"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase domain-containing protein"
/protein_id="YP_004538268.1"
/db_xref="GI:334145059"
/db_xref="GeneID:10718195"
/translation="MPMNSQIVAFLSAMPAMEMPPMSAVTPEMMRSFSDNSMATGEAL
PLARIEDMDLPLAGRTISARLYVPESADHAPPLTLFYHGGGFVIGTLDTHDNLCRKLA
RESGSAVLSVGYRLAPEAPFPAGLDDCYDALVWASRNGDKLGIDASRLAVAGDSAGGN
LAAAVAIRAREEGGPKLRHQLLIYPVTDNDFTRPSYAQNGAAGGFLTTEMMQWFWNHY
VGNRDEAHIPLATVQRTEDLSNLAPATIITAECDPLRDEGMAYAKRLADAGVPTEAEV
APGMIHGFASLFEAVPDVLPYLDRAGRRLREALA"
misc_feature 353614..>353958
/locus_tag="PP1Y_Mpl3531"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature 353656..354279
/locus_tag="PP1Y_Mpl3531"
/note="alpha/beta hydrolase fold; Region: Abhydrolase_3;
pfam07859"
/db_xref="CDD:203783"
misc_feature order(353668..353676,353884..353892,353908..353910)
/locus_tag="PP1Y_Mpl3531"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29383"
misc_feature <353797..354279
/locus_tag="PP1Y_Mpl3531"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene complement(354378..355133)
/locus_tag="PP1Y_Mpl3541"
/db_xref="GeneID:10718196"
CDS complement(354378..355133)
/locus_tag="PP1Y_Mpl3541"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:B2JTD7"
/note="KEGG: nar:Saro_3650"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538269.1"
/db_xref="GI:334145060"
/db_xref="GeneID:10718196"
/translation="MINYGLDGKVALVTGASGGIGRAAAQAFARSGARVLVCDVKDVE
GRETVSMIEAAGGRAAYQRCDVSNPDDIKAMVARAVDTWGRLDCAFNNAGVNLLGRDE
FEDENWDVAISINLTGVMRCIREEAAAMLETGGGAIVNTSSINGLVGNPNQPGYVASK
HGVVGLTRQAALKWAQQGIRVNAVCPGVIETPMTAPIAADPKLKAVIDSMTPMGRFGK
PEEIAEAVVWLCSEAASFVTGHPMVIDGGAIAF"
misc_feature complement(354387..355121)
/locus_tag="PP1Y_Mpl3541"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(354381..355118)
/locus_tag="PP1Y_Mpl3541"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(order(354567..354578,354654..354656,
354666..354668,354705..354713,354852..354860,
355011..355019,355074..355076,355080..355085,
355089..355091))
/locus_tag="PP1Y_Mpl3541"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(354654..354656,354666..354668,
354705..354707,354789..354791))
/locus_tag="PP1Y_Mpl3541"
/note="active site"
/db_xref="CDD:187535"
gene 355224..356288
/locus_tag="PP1Y_Mpl3550"
/db_xref="GeneID:10718197"
CDS 355224..356288
/locus_tag="PP1Y_Mpl3550"
/inference="protein motif:COG:COG1902"
/inference="similar to AA sequence:UniProt:A4XEV9"
/note="KEGG: nar:Saro_3610"
/codon_start=1
/transl_table=11
/product="NADH:flavin oxidoreductase"
/protein_id="YP_004538270.1"
/db_xref="GI:334145061"
/db_xref="GeneID:10718197"
/translation="MSSLFTTVSLGAVEMANRVVMSAMTRDRAGPGDVPGELMVEYYR
QRAGAGLIVTEGTQPCAEGKGYWRTPGIYSNEQIEGWRKVADAVHTEGGKIVMQLMHV
GRVVVPANRGFDADVVAPSAIPCPDKVPGPDGVPVECAMPRALASDELPLVAEQYAQA
ARNARAAGIDGVELHCSSGYLINQFLNASSNQRNDDFGGDPERRARFPAMVVKALADA
IGADRVGVRFSPGNPYNGMADADPAATFAPFLDAIEPLGCAYAHVVDMKLETLDTLAF
VRERFSGAIIANNMLTLESGSELLDSGRADAISFGRSFIANPDLVDRLRRGAPLAKPD
FTHLYSGEERGYTDYPALTD"
misc_feature 355230..356225
/locus_tag="PP1Y_Mpl3550"
/note="Old yellow enzyme (OYE)-like FMN binding domain.
OYE was the first flavin-dependent enzyme identified,
however its true physiological role remains elusive to
this day. Each monomer of OYE contains FMN as a
non-covalently bound cofactor, uses NADPH as a...; Region:
OYE_like_FMN; cd02933"
/db_xref="CDD:73381"
misc_feature order(355290..355292,355296..355298,355389..355391,
355515..355517,355902..355904,356088..356090,
356148..356150,356154..356162)
/locus_tag="PP1Y_Mpl3550"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73381"
misc_feature order(355290..355292,355296..355298,355389..355391,
355515..355517,355521..355523,355542..355544,
355746..355748,355755..355757,355761..355763,
355902..355904,355923..355925,356088..356090,
356148..356150,356154..356159)
/locus_tag="PP1Y_Mpl3550"
/note="active site"
/db_xref="CDD:73381"
misc_feature order(355296..355298,355521..355523,355746..355748,
355755..355757,355761..355763,356157..356159)
/locus_tag="PP1Y_Mpl3550"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73381"
misc_feature 355761..355763
/locus_tag="PP1Y_Mpl3550"
/note="catalytic residue [active]"
/db_xref="CDD:73381"
STS 356276..356293
/db_xref="UniSTS:98954"
gene complement(356348..356866)
/locus_tag="PP1Y_Mpl3560"
/db_xref="GeneID:10718198"
CDS complement(356348..356866)
/locus_tag="PP1Y_Mpl3560"
/inference="similar to AA sequence:UniProt:A4XEZ3"
/note="KEGG: nar:Saro_3645"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538271.1"
/db_xref="GI:334145062"
/db_xref="GeneID:10718198"
/translation="MTDTVSDLAARLAALEDKEAIRLLKSRYLRACDLKDVEAVRDSF
DPVEVRIAYQGFPVYSRRDDFVETFRQMGCQPGVFDIHHATNWDIELTGTDEAKGLWS
LNFRTILVGQRQVTRLAVEYEDIYRRRDGRWYIAESVSKVTSLITEEVGADGAIKVLA
YGEMPTPAAQPA"
misc_feature complement(356456..356830)
/locus_tag="PP1Y_Mpl3560"
/note="SnoaL-like domain; Region: SnoaL_4; pfam13577"
/db_xref="CDD:205755"
gene complement(356993..358105)
/locus_tag="PP1Y_Mpl3570"
/db_xref="GeneID:10718199"
CDS complement(356993..358105)
/locus_tag="PP1Y_Mpl3570"
/inference="protein motif:COG:COG2207"
/inference="similar to AA sequence:UniProt:Q396L1"
/note="KEGG: bur:Bcep18194_B1486"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_004538272.1"
/db_xref="GI:334145063"
/db_xref="GeneID:10718199"
/translation="MRWKLQNSSKTVTGRIRVSKRISRAAPGEVSLEVARQLLRIVDH
VGGQRDTVLAGAGLGHVASLLRNDGYDAQALSRHDFARLFAQCTWAIDAVAAWQEGRE
PLSKLGFDLMCHVVINCRTLEQVIRRIDDYSQILGPRLARLTLRTDGGRAIMEMATIR
RRRNVSACFSDLTGLSTYHRLFGWLVGQDLPLTGVQLRYEPVLDSRVAECLMPHRIVY
RSAENALVMPAEVLGRRVVRSAGELDRLLEYFPFDLMQPQDCDEHLSRTIARQMSLAL
SSGERLPTIAGLARQYGMGAATIKRRLEAEGTSMVQLKREARFGLAQRLLSDRRLTVS
AIAQHCQFADPGAFRRAFHQWAGMAPTRWREMNMEE"
misc_feature complement(357398..357970)
/locus_tag="PP1Y_Mpl3570"
/note="Arabinose-binding domain of AraC transcription
regulator, N-term; Region: Arabinose_bd; pfam12625"
/db_xref="CDD:204986"
misc_feature complement(<357185..>357280)
/locus_tag="PP1Y_Mpl3570"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
misc_feature complement(357014..357259)
/locus_tag="PP1Y_Mpl3570"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature complement(order(357203..357205,357206..357208,
357212..357226,357248..357253,357257..357259))
/locus_tag="PP1Y_Mpl3570"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(357014..357121)
/locus_tag="PP1Y_Mpl3570"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 358191..358982
/locus_tag="PP1Y_Mpl3579"
/db_xref="GeneID:10718200"
CDS 358191..358982
/locus_tag="PP1Y_Mpl3579"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XEV8"
/note="KEGG: nar:Saro_3609"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538273.1"
/db_xref="GI:334145064"
/db_xref="GeneID:10718200"
/translation="MTRILEGRAAIVTGGGQGVGQGIARALAEAGANVLIAQRNAEQG
EEEAAFLRSAHGIDAAFLRSDVTILEQVEATVAAAQDRWGRLDLLVNNAGASFPKRIE
NHTDEEMAGSFALNYWAVFWAMRAAFPIMKAQKFGRIINMGSLNGVNAHMFTVAYNAS
KEAMRALTRTAAVEWGPHGITCNTICPSASSPQARDYFKANPEMASQILQQVPAGRFG
DAEKDIGPIAVFLASEGGSYMNGNTLFADGGSHVNGVAWRPQVED"
misc_feature 358203..358937
/locus_tag="PP1Y_Mpl3579"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05557"
/db_xref="CDD:180126"
misc_feature 358218..358931
/locus_tag="PP1Y_Mpl3579"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(358230..358232,358236..358247,358302..358310,
358380..358388,358464..358472,358533..358535,
358614..358622,358659..358661,358671..358673,
358749..358757,358761..358766)
/locus_tag="PP1Y_Mpl3579"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(358536..358538,358620..358622,358659..358661,
358671..358673)
/locus_tag="PP1Y_Mpl3579"
/note="active site"
/db_xref="CDD:212491"
gene 358987..359802
/locus_tag="PP1Y_Mpl3588"
/db_xref="GeneID:10718201"
CDS 358987..359802
/locus_tag="PP1Y_Mpl3588"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XEV7"
/note="KEGG: nar:Saro_3608"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538274.1"
/db_xref="GI:334145065"
/db_xref="GeneID:10718201"
/translation="MQRLQGKRAVVTGAAQGIGAAIARRLAEEGATVALLDLDADKAG
AVLGTPHFGLACDVSDTASVDAAFAQVQARLGGVDILVNNAGRGSAPGDGMDLFYAAQ
AERAQQIAEGKVPSVFVDQTIHCSDEGWSQVLTVTLDGVFRCSRAAVRLMAEEGIGGS
IINIGSTAGVKGNGPVPYCTAKAAVLGMTRAMACELADRGIRVNAVNPGATETPIYAG
LPPELKDSIAADSVLKRLASPEEVTGAVAFLASEDASFATGSTVTVNGGAYFA"
misc_feature <359137..359793
/locus_tag="PP1Y_Mpl3588"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(359236..359244,359473..359481,359518..359520,
359530..359532,359608..359619)
/locus_tag="PP1Y_Mpl3588"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(359395..359397,359479..359481,359518..359520,
359530..359532)
/locus_tag="PP1Y_Mpl3588"
/note="active site"
/db_xref="CDD:187535"
gene complement(359876..362029)
/locus_tag="PP1Y_Mpl3595"
/db_xref="GeneID:10718202"
CDS complement(359876..362029)
/locus_tag="PP1Y_Mpl3595"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:Q2G3Q4"
/note="KEGG: nar:Saro_3084"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538275.1"
/db_xref="GI:334145066"
/db_xref="GeneID:10718202"
/translation="MSLNVRTFLLAGVAGIAFASPAVAQEAGSRDGLNEIVVTAQKRE
ESLQDVPVSIVALGLQDLENKGISDLTDLRTQVPALQVTPHPNSAITARIFMRGVGNN
DDQITMDPSVAVYIDGVYVARSQGLASDVAELERVEVLRGPQGSLYGRNATGGAINFI
TRAPKLGEFGAEQKLTYGNYDQFRSRTRVNVPIGDTLAVEFGYLHAQIDGYVDNLGTG
VKRFGDQRRDGYRAAALWQPTDAISVRYTYDRSEINDTPAFIAYVPFYPEVAPRPTAG
SPSVSNLQPNDVVSQGHNLTASWDVSDSLTVKSITGYRKLRNQTMQDYHSGVFGPFPV
FRTAFDSSQKQFSEELQLIGSGLDDRLEYVLGFYYFEESADSFDTTVVPGRPRSERTV
TIDNKAYAVYAQATYNPAFLDNRLFVTLGGRWSRDERKATLQDVAVPSVGDPIPGTPG
RGDRAFQNFSPSATLRYEFSDKTNAYAKVVSGYKTGGYNVRASTTDRFNAGFGDETLT
SYEFGVKSDMLDNRLRLNAAFFYTSYKDIQLNVQSDPNNIARTDVLNAGKATIKGLEL
DLSLRPARGLTVSANYAYLDAKYDRILNAAGDDVTSQYNYIQAPNHTLVTSVNYEFPP
SPIGTFAVYADYFLQDKKMTSSTDSRYIVGSYGLLNGRVTLSDIPVGFGNWQLAVFGR
NLTDKVYYADHFNAGLPSAFFGQPRTYGVELTFKY"
misc_feature complement(359879..361885)
/locus_tag="PP1Y_Mpl3595"
/note="TonB-dependent siderophore receptor; Region:
TonB-siderophor; TIGR01783"
/db_xref="CDD:162535"
misc_feature complement(359879..361873)
/locus_tag="PP1Y_Mpl3595"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(361547..361573,361607..361639,
361667..361690,361733..361750,361787..361816,
361844..361873))
/locus_tag="PP1Y_Mpl3595"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(361013..361015,361076..361078))
/locus_tag="PP1Y_Mpl3595"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 362168..362797
/locus_tag="PP1Y_Mpl3610"
/db_xref="GeneID:10718203"
CDS 362168..362797
/locus_tag="PP1Y_Mpl3610"
/inference="protein motif:COG:COG1309"
/inference="similar to AA sequence:UniProt:Q2G3Q3"
/note="assigned by KAAS to KEGG Orthology:K09017 TetR/AcrR
family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR/AcrR family transcriptional regulator"
/protein_id="YP_004538276.1"
/db_xref="GI:334145067"
/db_xref="GeneID:10718203"
/translation="MKAIRHQRGKATREAIVKAAETVFAEVGYGEARLEDIAAIVGVR
RPSMVYYFAGKQELYDAVEADIFEAMHHFSRERLEGVTGPLEKLLALTDAWLDFIVAR
PTAARIIQRLIADVRPRQGNPIEFSHVALDILEDIVTEGVESGRFRPVSPMFVLNGVS
GGILFYVNNSTLIGEQRFYEPSDPETLAEYRALLGRLIRAAVLCDAPAG"
misc_feature 362180..>362623
/locus_tag="PP1Y_Mpl3610"
/note="pyrimidine utilization regulatory protein R;
Region: RutR; TIGR03613"
/db_xref="CDD:200300"
misc_feature 362213..362353
/locus_tag="PP1Y_Mpl3610"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 362865..363842
/locus_tag="PP1Y_Mpl3617"
/db_xref="GeneID:10718204"
CDS 362865..363842
/locus_tag="PP1Y_Mpl3617"
/EC_number="3.1.3.-"
/inference="protein motif:COG:COG0496"
/inference="similar to AA sequence:UniProt:B7H2T6"
/note="KEGG: reh:H16_B1063"
/codon_start=1
/transl_table=11
/product="acid phosphatase"
/protein_id="YP_004538277.1"
/db_xref="GI:334145068"
/db_xref="GeneID:10718204"
/translation="MHKRLGAACLPFLLLAAQAADARNIVIANDDGLTSNVIALYNAL
KSRGDDVIVSVPCTGQSGMGAAVKFLRPLGPLAQDCHNGAAPKGAPAVGSIERPGIAK
QDFHYVDGTPVMALLYGIDVLAQKRWGHAPDLVLSGPNEGQNIGSIIVSSGTVNVVQY
ASARGIPAIALSAGEETADNKTLANPQSAKIASLSVTLLDALEKQAGNKPLLPTGTSL
NVNFPHQLENARWKLTRVGTYDAYGVHFVEDMSQSPMAKALGAGDVALPGIVIDMNQA
KPTPAQKDDESVAVRASITISVMQLGYGSNARTGQNAAKALVSRLSRQR"
misc_feature 362934..363581
/locus_tag="PP1Y_Mpl3617"
/note="Survival protein SurE; Region: SurE; pfam01975"
/db_xref="CDD:202072"
gene 363921..364715
/locus_tag="PP1Y_Mpl3626"
/db_xref="GeneID:10718205"
CDS 363921..364715
/locus_tag="PP1Y_Mpl3626"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:Q0KBJ8"
/note="KEGG: nar:Saro_3083"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538278.1"
/db_xref="GI:334145069"
/db_xref="GeneID:10718205"
/translation="MTNNRPPDLAPALGSPQSSVVITGGASGIGLASARAVAAVGRPV
AIWDINEEALERAAAQIRDETGTRCHVECVDMRRTDDFASALDRCRAALPPLGGLVHC
AGIVDTGSLEGITIDNWQAGIDIHLRALAFMTQAMVGDLAGNPGSAIVAITSINATLG
NAVNPIYSAAKGGMLSLVRSLADRLARDGIRINSVSPGQILTPMMRPAVDNLEKGYFE
RRILLERLGDPEEIGRVVRFLLSDEASYITAAELVVDGGNISSQRG"
misc_feature 363978..364691
/locus_tag="PP1Y_Mpl3626"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature 363978..364685
/locus_tag="PP1Y_Mpl3626"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(363990..363992,363996..364007,364062..364070,
364137..364139,364143..364148,364224..364232,
364293..364295,364374..364382,364419..364421,
364431..364433,364509..364520,364524..364529)
/locus_tag="PP1Y_Mpl3626"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(364296..364298,364380..364382,364419..364421,
364431..364433)
/locus_tag="PP1Y_Mpl3626"
/note="active site"
/db_xref="CDD:212491"
gene complement(364798..366273)
/locus_tag="PP1Y_Mpl3638"
/db_xref="GeneID:10718206"
CDS complement(364798..366273)
/locus_tag="PP1Y_Mpl3638"
/inference="protein motif:COG:COG2072"
/inference="similar to AA sequence:UniProt:A4XF56"
/note="KEGG: nar:Saro_3708"
/codon_start=1
/transl_table=11
/product="FAD dependent oxidoreductase"
/protein_id="YP_004538279.1"
/db_xref="GI:334145070"
/db_xref="GeneID:10718206"
/translation="MTATNGKRSVKTAIIGAGMAGILAAIKLRERGEEFVVFEKADRI
GGTWRENRYPGLTCDVPSHAYTYSFEPYPDWKANFAGGPEIQSYFEMVTDKYGIRRNI
RFGCEVTSVDWSEDSCLWTVTLASGETYVADAVVAASGVLHHPNIPQIEGLDSFEGPV
FHTARWDDDAPIDGARVGLIGCGSTGIQIVTAINKRVERLVHFQRSPQWILPVEQFEF
TDEQRAAFRADPKLIDAIRYSDEYIGAVLRFTKGITEVDGPEMTAIEDLCRENLEKSV
RDPDLREKLRPDYRAACKRLIYSWCYYEEVQNPSVYVETGGIERVEPKGVRMKDGTFH
ELDTLVLATGFRADRFIRPAGVTGQGGRTLDDFWAVRPSAYYAVAIPGFPNFFMLNGP
TGPVGNFSLIDIAERQWGYIDQLMDRLRNGEARYIAPKAEAHAEYEERRIAAAKTTIF
GSGCSSWYLDATGVPSSWPWGYQDFADAMVAPKFEDYALSA"
misc_feature complement(365644..366195)
/locus_tag="PP1Y_Mpl3638"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox_3; pfam13738"
/db_xref="CDD:205912"
misc_feature complement(366043..>366192)
/locus_tag="PP1Y_Mpl3638"
/note="NAD(P)-binding Rossmann-like domain; Region:
NAD_binding_8; pfam13450"
/db_xref="CDD:205628"
gene 366495..367658
/locus_tag="PP1Y_Mpl3654"
/db_xref="GeneID:10718207"
CDS 366495..367658
/locus_tag="PP1Y_Mpl3654"
/inference="protein motif:COG:COG2141"
/inference="similar to AA sequence:UniProt:A4XEU3"
/note="KEGG: nar:Saro_3594"
/codon_start=1
/transl_table=11
/product="luciferase family protein"
/protein_id="YP_004538280.1"
/db_xref="GI:334145071"
/db_xref="GeneID:10718207"
/translation="MKFSIIYEAQMVDTSRENEQAVFLQIVEQAKLAEEKGFDCIWCV
EHTALTQYAHMSAPETVLAFIAGATSRIHVGHGVVCLPPAMNHPVKVAERIATLDILS
QGRLHFGVGKGGTQQEAGTFGYDLADLQPMIDESMYLIPKIMVQDEIEHDGEYIKIPK
RPIHPKPYQDPHPPMYMACTRENTLVAAGSRGIGALVLGFSGPDEIAKKNAIYREAFR
NRKAEDQVGFRPTEHLAALCAATVLDDREEARKIGLRGQRFFAESIAYWYQGGPKPTV
DDQLSGDEQAAILEQEKQQTVAYLSEEAIPVGDEHLSNYTIAQDAYGTPDDCIRYVQR
LIDAGADEILFIFQMGGIPHDKIMETITNIGDKVIPHFRAQAEVKAKALAEVG"
misc_feature 366495..367577
/locus_tag="PP1Y_Mpl3654"
/note="Flavin-utilizing monoxygenases; Region:
Flavin_utilizing_monoxygenases; cl07892"
/db_xref="CDD:213112"
misc_feature 366567..367604
/locus_tag="PP1Y_Mpl3654"
/note="Coenzyme F420-dependent N5,N10-methylene
tetrahydromethanopterin reductase and related
flavin-dependent oxidoreductases [Energy production and
conversion]; Region: COG2141"
/db_xref="CDD:32324"
gene 367733..368815
/locus_tag="PP1Y_Mpl3666"
/db_xref="GeneID:10718208"
CDS 367733..368815
/locus_tag="PP1Y_Mpl3666"
/inference="protein motif:COG:COG2771"
/inference="similar to AA sequence:UniProt:A4XEU4"
/note="KEGG: nar:Saro_3595"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_004538281.1"
/db_xref="GI:334145072"
/db_xref="GeneID:10718208"
/translation="MKDEALALSNLLAALYGGIDDERPWQAFLKALAEWMEATYATLI
ITTPGNEMPATFITPGADPQRSEDYIRTYFAQDPFRGLPEGEVMTYRGFLAGLPEETY
ETFSGYMREAHSAQVIGVDLRFPRGFEARFRVTRIETEPEFRPDDIAKMQGLVPHLRL
AIALFEKLQFAGAQHGAFHSAAQGMGIGLVVLDRDRHVVSRNPLAEQLLDEGEGVHLS
GQWLTFDNAADARRIDTMLTENYSDGPTRFRIERPVNGDLMATARPIDVPAVGSGSGA
LALLLSQPGHEELPSPQVLRELFGLTPAEARLASTIAGGESLVNAAHSLGIAHNTAKV
QLRSVFAKTGVRRQAQLVSLIAHLSG"
misc_feature 368621..368797
/locus_tag="PP1Y_Mpl3666"
/note="DNA-binding HTH domain-containing proteins
[Transcription]; Region: CsgD; COG2771"
/db_xref="CDD:32632"
misc_feature order(368636..368644,368681..368689,368711..368716,
368720..368725,368729..368743,368774..368776)
/locus_tag="PP1Y_Mpl3666"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(368669..368671,368675..368677,368681..368683,
368774..368782,368789..368791)
/locus_tag="PP1Y_Mpl3666"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(368832..369602)
/locus_tag="PP1Y_Mpl3675"
/db_xref="GeneID:10718209"
CDS complement(368832..369602)
/locus_tag="PP1Y_Mpl3675"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A4XF55"
/note="KEGG: nar:Saro_3707"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538282.1"
/db_xref="GI:334145073"
/db_xref="GeneID:10718209"
/translation="MKERLEGKAIVVVGAGTGIGAATVRRLCLEGARVCAADINLDAA
AAVAEEMVAEGREAFAVHVDIAEEASVREAFAGAMGGLGRLDGVHVNAADLRTIFADS
DALDVDLGVFDRTIAVNLRGHLLCTRQALPALRKSGGGAIVYTSSDAGDAGEPERPSY
AMSKSALNALVRHVASRWGKEGITANAVAPGFVMTPEMIAGGQVPEPWIAHCLQGVHS
TRLGKVEDIAAMVALLLSEDGRWVNGQVIHVNGGAFYR"
misc_feature complement(368838..369530)
/locus_tag="PP1Y_Mpl3675"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(368853..>369425)
/locus_tag="PP1Y_Mpl3675"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(369015..369020,369024..369035,
369111..369113,369123..369125,369162..369170,
369249..369251,369324..369332,369408..369416))
/locus_tag="PP1Y_Mpl3675"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(369111..369113,369123..369125,
369162..369164,369246..369248))
/locus_tag="PP1Y_Mpl3675"
/note="active site"
/db_xref="CDD:212491"
gene 369870..372035
/locus_tag="PP1Y_Mpl3687"
/db_xref="GeneID:10718211"
CDS 369870..372035
/locus_tag="PP1Y_Mpl3687"
/inference="protein motif:COG:COG1902"
/inference="similar to AA sequence:UniProt:A4XEW5"
/note="KEGG: nar:Saro_3616"
/codon_start=1
/transl_table=11
/product="NADH:flavin oxidoreductase"
/protein_id="YP_004538283.1"
/db_xref="GI:334145074"
/db_xref="GeneID:10718211"
/translation="MSSNQFPYLLSEGRIGAMTLRNRIAVTAMGVSLSEADGTVGERL
IAYHEEQAKGGAGLIISGVTGVGWPTGGVSINQTAISDDRFVPGLTELTRRVHAHGAK
IAAQLHHGGLVAAYSAFAHGEQLWAPAYPPAPKANFTDYFLMEERAGMQGLPVPQVKV
LEKADIDLVVRQFADGARRAKQAGFDGVEIHGGHGYLLSSFVSPYTNNRTDEYGGGLE
NRARLALDVLRAVRAEVGPDFPVWMKIDSREIGKQNAITIELAQQFAQMVEEAGADAI
TVTAYHNTDLGKLHSESHTPHIEGWNLDAVARIKSVVSIPVIGSGRIEPEVADKAIGK
NELDIVAMGRKLLADPHLPAKLTRGAPDEVRPCIYCYTCISAIYMGDMVRCAVNPQLG
REYQGEPAPAKSARHIAVVGGGPGGMEAARRLAALGHKVTLIEKSDRLGGTLRFASLA
YEPNERLLNWLRRQVTEAGVEIRLSTVASPELLRGMGVDTVLVATGAVRDMPPLPGND
LDHVYSGDDMRNLMLGETTSELKRKTSLFSRMATKIGAATGATANLSLVRKATHAWMP
LADDIAIVGGELVGLELAEFLMERGRKVHVIDEAPRMGKGLMLVRRMRILAELAEHGV
GLHSGVSEIAIRKDSVTFTDAEGHAQSVRAGNVIVARGAHGDTSLAEALETAGMKVHV
FGDATGVTYIEGAMRGAADAVAQLSSGLRLEEHREMQHG"
misc_feature 369894..371978
/locus_tag="PP1Y_Mpl3687"
/note="mycofactocin system FadH/OYE family oxidoreductase
2; Region: mycofact_OYE_2; TIGR03997"
/db_xref="CDD:188512"
misc_feature 369897..370946
/locus_tag="PP1Y_Mpl3687"
/note="Old yellow enzyme (OYE)-like FMN binding domain.
OYE was the first flavin-dependent enzyme identified,
however its true physiological role remains elusive to
this day. Each monomer of OYE contains FMN as a
non-covalently bound cofactor, uses NADPH as a...; Region:
OYE_like_FMN_family; cd02803"
/db_xref="CDD:73369"
misc_feature order(369951..369953,369957..369959,370056..370058,
370185..370187,370455..370457,370599..370601,
370896..370901)
/locus_tag="PP1Y_Mpl3687"
/note="active site"
/db_xref="CDD:73369"
misc_feature order(369951..369953,369957..369959,370056..370058,
370185..370187,370599..370601,370896..370901)
/locus_tag="PP1Y_Mpl3687"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73369"
misc_feature order(370449..370451,370455..370457)
/locus_tag="PP1Y_Mpl3687"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73369"
misc_feature 370455..370457
/locus_tag="PP1Y_Mpl3687"
/note="putative catalytic residue [active]"
/db_xref="CDD:73369"
misc_feature 371088..>371303
/locus_tag="PP1Y_Mpl3687"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
misc_feature 371580..371810
/locus_tag="PP1Y_Mpl3687"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
gene 372028..372660
/locus_tag="PP1Y_Mpl3709"
/db_xref="GeneID:10718212"
CDS 372028..372660
/locus_tag="PP1Y_Mpl3709"
/inference="protein motif:COG:COG1522"
/inference="similar to AA sequence:UniProt:A4XEW3"
/note="KEGG: nar:Saro_3706"
/codon_start=1
/transl_table=11
/product="AsnC family transcriptional regulator"
/protein_id="YP_004538284.1"
/db_xref="GI:334145075"
/db_xref="GeneID:10718212"
/translation="MDDRPGTAKRVKGKDIPGQTPTGEQKKARVAIDEGGTLRKASGR
KAIRAISGDMNQSISFDATDHAIVEQLRLNGRANNQQIAEALGLTATTVSTRIKRMED
ANQLRVVGVSDFAAHGFNVLMKIAIEIDGRPASEVAKDLSNLPEIFAVHLVTGRYDID
VLVALHDFADLNGFLFDNLANVRGIRSMTPAVVVDVVKYQFEVAPIEGER"
misc_feature 372208..372624
/locus_tag="PP1Y_Mpl3709"
/note="Transcriptional regulators [Transcription]; Region:
Lrp; COG1522"
/db_xref="CDD:31711"
misc_feature 372208..372330
/locus_tag="PP1Y_Mpl3709"
/note="AsnC-type helix-turn-helix domain; Region:
HTH_AsnC-type; pfam13404"
/db_xref="CDD:205582"
misc_feature order(372211..372213,372220..372225,372232..372237,
372247..372249,372337..372339,372397..372402,
372406..372414)
/locus_tag="PP1Y_Mpl3709"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:28974"
misc_feature order(372211..372219,372259..372267,372292..372303,
372307..372312,372319..372324,372328..372333,
372349..372357,372370..372378)
/locus_tag="PP1Y_Mpl3709"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(372259..372261,372268..372270,372397..372399)
/locus_tag="PP1Y_Mpl3709"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
misc_feature 372400..372606
/locus_tag="PP1Y_Mpl3709"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:189815"
gene 372677..373144
/locus_tag="PP1Y_Mpl3714"
/db_xref="GeneID:10718214"
CDS 372677..373144
/locus_tag="PP1Y_Mpl3714"
/inference="protein motif:COG:COG1522"
/inference="similar to AA sequence:UniProt:A4XEW2"
/note="KEGG: nar:Saro_3613"
/codon_start=1
/transl_table=11
/product="AsnC family transcriptional regulator"
/protein_id="YP_004538285.1"
/db_xref="GI:334145076"
/db_xref="GeneID:10718214"
/translation="MLDQLDQDLIRLLAHDARVSNRRLATELGVTEGTVRGRIKRLQQ
DGLLAFTAITGYEIARKSRLAFINVQAEVDRVREVAQAISELPLINAVLLTMGQFNIT
AMCLFEELDMLVETASDQILSIKGVHHVETSIAVKTVKYNARMAKITKPSEPD"
misc_feature 372704..373111
/locus_tag="PP1Y_Mpl3714"
/note="Transcriptional regulators [Transcription]; Region:
Lrp; COG1522"
/db_xref="CDD:31711"
misc_feature 372704..372820
/locus_tag="PP1Y_Mpl3714"
/note="Winged helix-turn-helix DNA-binding; Region:
HTH_24; pfam13412"
/db_xref="CDD:205590"
misc_feature 372902..373090
/locus_tag="PP1Y_Mpl3714"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:189815"
gene 373757..374536
/locus_tag="PP1Y_Mpl3732"
/db_xref="GeneID:10718215"
CDS 373757..374536
/locus_tag="PP1Y_Mpl3732"
/inference="protein motif:COG:COG1802"
/inference="similar to AA sequence:UniProt:B7YQG6"
/note="KEGG: vap:Vapar_0428"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_004538286.1"
/db_xref="GI:334145077"
/db_xref="GeneID:10718215"
/translation="MKQSNDLSNKGRVASSPRRRARKAEAAPNLGAGVAAHGVDVEQH
IYQTVFDSVLNQRLVPGTKLPEPALCELFKVSRAVIRKVLQRLEHDRIVELRPNKGAV
IAAPTPEETRQIFEARRALEVSIVEIAARRRTAQDLADLRQLLASEHELTQNPYQPTW
AACAREFHLRIAAVADNPILTAYLTELMTRCSLIVALYQPLGNTACEHAEHGRIVDYM
EKGDVASARAEMGRHLRALEDNISLDRSGSTQTLAQMLNLG"
misc_feature 373883..374479
/locus_tag="PP1Y_Mpl3732"
/note="Transcriptional regulators [Transcription]; Region:
FadR; COG2186"
/db_xref="CDD:32369"
misc_feature 373883..374068
/locus_tag="PP1Y_Mpl3732"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature order(373949..373951,373952..373957,373979..373993,
373997..374002,374009..374011,374039..374044,
374048..374059)
/locus_tag="PP1Y_Mpl3732"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature 374093..374464
/locus_tag="PP1Y_Mpl3732"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:203742"
gene 375271..378549
/locus_tag="PP1Y_Mpl3748"
/db_xref="GeneID:10718216"
CDS 375271..378549
/locus_tag="PP1Y_Mpl3748"
/inference="similar to AA sequence:UniProt:B6IR14"
/note="KEGG: rce:RC1_0463"
/codon_start=1
/transl_table=11
/product="TonB-dependent outer membrane receptor"
/protein_id="YP_004538287.1"
/db_xref="GI:334145078"
/db_xref="GeneID:10718216"
/translation="MRIAKLAAGLSLSAMGIALIVPSAIHAQVITGAINGRLTDPEGN
PLGDVSVAIVHVPSGTTTTATTSDDGVYAVRNLRPGGPYRITATSLDFGSKSVDVAAI
NTGDAFQANFSLGEVNEIVVSGSSFGGGDLKTGPSSNFSAQKIEAAPSISRDLKDLAR
MNPFVAVDPSNSDALVCGGANNRTNSLTIDGVRQNDDFGLQANGYPTQRSPISIDVIE
TLGVELAPYDVNYGAFGGCTLNATTKSGGNSFHGQVFYEYTGDALQGSSFGYTDFQEG
SRQKRRLTGKFTEKTFGATLTGPIIKDTLFFTLNYEKFSRSEPSLVGPTGSDFANQVP
GVSVEQANEVRQILKDRYGYDPLGYEATKLPVRDEKFFGKLDWNIAPGHRATVSYQET
KGSSVSAIGNTLTGSSTSLGLLSQWVERQNNLQVYKAQVFSDWTDNFSTEFSASYKKM
DNPGHPLAGNDFAQFRVYLNGTTTGPSIYAGTNASYQANELTTYLQQYRAKATYTAGS
HRITAGYEREMLKIWDLFVQNANGSYVFNSLDDLRAGNASSVSYANAASNQKADAGFN
LRTTTNTIYLQDEWAVLPELTVKAGLRYDFFEQSDRPDENPLVMARYGISNTENLDGK
HLLQPRFGFNWKPDPTLTVYGGIGLFGGGSPTVWTANTYYNTGQMLGNVTCTRNDTAS
AACLASLNNVDGFNVNPALQQANSASAALGQGLINALDKDFKPQSTWKMSIGAQKEFD
LGAFGNGWRIAGEFIHSEVQNAVAWKELYADANQGPPAPDGRPTFLPGRENRNDILVT
NTKKGYGNQVGLALAKTWREGPLAGLEAMFSHTYIRSKDINPGITTVASSNYSGVATS
DPNDPALATSNYEFRHLSKLSISYSHAFFGDNRTRLTLFGQRRSGQVFSYTFDVGANA
NMAADMLVGENGALATRNRQLLYVPQTVGGQVTAGSDPIVTYGAGFDLQAFNAFLKNN
GLLKYAGKITPRNAFKAPAITTIDMRISQEIPGFFPEGAKAEIYLDVENLGNLINKKW
GVLQQIPSPYVSANVVARNCQIAGACATQGNFYQYDSFVGRAATSFNTQSVWQMKIGA
RFKF"
misc_feature 375367..375612
/locus_tag="PP1Y_Mpl3748"
/note="Carboxypeptidase regulatory-like domain; Region:
CarboxypepD_reg; pfam13620"
/db_xref="CDD:205798"
misc_feature <376963..>377214
/locus_tag="PP1Y_Mpl3748"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene 378590..379948
/locus_tag="PP1Y_Mpl3776"
/db_xref="GeneID:10718217"
CDS 378590..379948
/locus_tag="PP1Y_Mpl3776"
/inference="protein motif:COG:COG0402"
/inference="similar to AA sequence:UniProt:A8G7W6"
/note="KEGG: spe:Spro_0096"
/codon_start=1
/transl_table=11
/product="deaminase"
/protein_id="YP_004538288.1"
/db_xref="GI:334145079"
/db_xref="GeneID:10718217"
/translation="MQLSRRGILATALVAGAAGAAGVTSPAFAAANKGPHAAVHGASF
LLRNVLLETGYKREGADVVGTDTDKASLLVQDGRIAAILPADAPAPAGTAVRDGAGML
LLPSFRDMHIHLDKTFYGGPWVPPRKRTGGIRGQIVLEQTLLPQMLPTLEERAGKLVD
LLQSNGTTFARSHCNVDPVVGTKHVELLKHALDQRADGFGHEIVAFPQHGFVSANLIP
TMRAAMAAGATHVGGIDPTTLDGGMEKSVDAMMQIALDMNKSVDIHLHEPGASGIAAI
RRIADTVEREPSLRGKVTISHAFSLMSIPASEMEELATRLASLDMSVASTLPFGGKVM
PIPILLDKGVNVYTGTDSVEDHWSVFGSGDVLEKAKLACELYRWSDEFSISQSLKIAT
GGPTPLDATGRQAWPKAGDAADMVLVPASCSAEAVARLAPRKAVFHAGNLVAGTLDAK
TA"
misc_feature 378716..379930
/locus_tag="PP1Y_Mpl3776"
/note="putative deaminase; Validated; Region: PRK06846"
/db_xref="CDD:180726"
misc_feature 378722..379918
/locus_tag="PP1Y_Mpl3776"
/note="Bacterial cytosine deaminase and related
metal-dependent hydrolases. Cytosine deaminases (CDs)
catalyze the deamination of cytosine, producing uracil and
ammonia. They play an important role in pyrimidine
salvage. CDs are present in prokaryotes and fungi; Region:
Bact_CD; cd01293"
/db_xref="CDD:30036"
misc_feature order(378920..378922,378926..378928,379379..379381,
379388..379390,379478..379480,379640..379642)
/locus_tag="PP1Y_Mpl3776"
/note="active site"
/db_xref="CDD:30036"
gene complement(380771..382156)
/locus_tag="PP1Y_Mpl3800"
/db_xref="GeneID:10718218"
CDS complement(380771..382156)
/locus_tag="PP1Y_Mpl3800"
/inference="protein motif:COG:COG3920"
/inference="similar to AA sequence:UniProt:A5P796"
/note="KEGG: met:M446_1069"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_004538289.1"
/db_xref="GI:334145080"
/db_xref="GeneID:10718218"
/translation="MDRNETIIWMNDAYLRATMRTRESIIGRRMFDAFPSEPGTESYE
LLSASLKRVVETAEVDEIALIRYDIASPDGSMEQRYWSATHTPLLDSDGRVDAILQHT
VDVTELHRLRCLRDESGLVRRADAVQHRNLDLQAQRARLTRMFEQAPGFMAVLVGPEH
EFAMVNAAYTQLVGREKLVGRRLADALPEVVSQGSIALLDEVRLTGRPYHGRSQEIYF
EAVPGAPRDRRFLDFIYQPIFEDGEVAAIFVQGQDMTEVVEAARHQDLLINELNHRVK
NTLAIVQSLASQSFRNVEMAGSARQSFEERLRALAGAHNLLTDASWRMTLLDEVVREA
TAPAAGADACRIEANGPVIALSPRLTVALTMALHELTTNAMKYGALSNDAGRICIAWF
REAGNSDYLVLDWQELGGPPVKPSGRKGFGSRLIERGLAAEYGGKAELDFREEGLHCR
VVLYAPEVSAA"
misc_feature complement(381836..382156)
/locus_tag="PP1Y_Mpl3800"
/note="PAS domain; Region: PAS_9; pfam13426"
/db_xref="CDD:205604"
misc_feature complement(381380..381724)
/locus_tag="PP1Y_Mpl3800"
/note="PAS fold; Region: PAS_4; pfam08448"
/db_xref="CDD:117025"
misc_feature complement(380786..381400)
/locus_tag="PP1Y_Mpl3800"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG3920"
/db_xref="CDD:33706"
misc_feature complement(381104..381349)
/locus_tag="PP1Y_Mpl3800"
/note="HWE histidine kinase; Region: HWE_HK; pfam07536"
/db_xref="CDD:148894"
gene complement(382343..383155)
/locus_tag="PP1Y_Mpl3815"
/db_xref="GeneID:10718219"
CDS complement(382343..383155)
/locus_tag="PP1Y_Mpl3815"
/inference="similar to AA sequence:UniProt:Q2GA49"
/note="KEGG: nar:Saro_0829"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538290.1"
/db_xref="GI:334145081"
/db_xref="GeneID:10718219"
/translation="MHTIQASVAAILLSLMTMPALAAESDGTLRPPPQWSGEVSSGVT
YQEGDYGTDDKFETLSVPVAAAVSKGRFHLSASIPYVRTTAPIGVIVSKGGLLGTPLF
ASGSLSQERTSREGIGDLTLQAAVDLPIGDFVTTWVTSIKVPTASSAKGLGTGKVDYA
VTGQIARPIGAITPFASLGYTVLGEPDGFDVRNTLSGSAGARVALGHRSFAALSYSYE
ESAIDTLADREALGLGIGTKLNDRMRLSVEGAAGLSEGAPATSVAARIGFGF"
misc_feature complement(<382346..382606)
/locus_tag="PP1Y_Mpl3815"
/note="Protein of unknown function, DUF481; Region:
DUF481; cl01213"
/db_xref="CDD:207341"
gene 383502..384560
/locus_tag="PP1Y_Mpl3829"
/db_xref="GeneID:10718220"
CDS 383502..384560
/locus_tag="PP1Y_Mpl3829"
/inference="similar to AA sequence:UniProt:C1A782"
/note="KEGG: gau:GAU_1050"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538291.1"
/db_xref="GI:334145082"
/db_xref="GeneID:10718220"
/translation="MIKGARVPERAYLIVLWAVSVIFAGFIVGFGNLVIGDLPQVETT
VSPEQFVDKARDEKLQSELKQAEDRSGAIDDKLQIARLQLEQARRASQTATETFQAWI
QTRTATTDPQQDPEVVQRTRQLEQLKGNERAIQGRINTLENERLPLEQRATALRQEQA
DLQDAAYPAFEKALFWQELRIFLLRLALTLPMLLLAAWLVAKRRKGAYWPLSRGFVIA
AVFVFFVELVPYLPSYGGYIRYGVGILLTVAAGHFLIKNMRHYLEKRREVEAQAEEER
RKLVSHDEAFKKMSAKVCPGCDRPIAAMEGSETNFCVHCGMTLFDHCSKCNARKMAFF
RYCMACGTPAQDAAKAGT"
misc_feature 384381..384524
/locus_tag="PP1Y_Mpl3829"
/note="Double zinc ribbon; Region: DZR; pfam12773"
/db_xref="CDD:205068"
gene 385083..387455
/locus_tag="PP1Y_Mpl3846"
/db_xref="GeneID:10718221"
CDS 385083..387455
/locus_tag="PP1Y_Mpl3846"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B8H5J4"
/note="KEGG: nar:Saro_2580"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538292.1"
/db_xref="GI:334145083"
/db_xref="GeneID:10718221"
/translation="MIAFSAAAVAQDQADQNGGQAYNNEIIVTATKRNESIQNVPFSI
NAQTAEAMRRSGATSIEDVSRSIAGLTVQNLGPGQSQVSIRGVSAGQVVRDQPGVKEQ
VGVYMDESVISLSLFTPDFDLFDLDRIETLRGPQGTLFGSGSEGGTVRYITKQPKLDI
VEGTVEAGANVLKGGDVGYDGKAAVNLPLGETAALRVVGYAEHYAGFVDAIGPAAGKN
INDGNRYGGRASVLWEPSPGIKVTPRIIYQDIKTNGFNREDTYHLYYNPLIDASQTLS
ERTQYLKLREEFRDKTTLADLTINADLTDAIALTSVTTYIHRNILVARDASALTGSVS
VSPFAIDLGVDGSLANLPSELRDRTKLKQWTQELRLASTDAGPFQWVFGGFYSHVDRT
YAQRLPTPGYDAIVDAALGAGTSASVANGFPADSPYNADIPYIIKQAAVFGEASYKLG
QFKLTAGGRYYDFKEKRDFISGGIFANGDRNIGDKTSSNGFSPRFIASYEASPDVTVN
LQASKGFRLGGVNDPLNIPLCSGGATGPDAATYGNRPTFDDETLWNYEGGIKAHTGGI
TFNGAVFHNEIRNLQVTADAGSCSSRVLFNVPKAHTTGVEAELAARLMPGFDVTVNGS
YIDSKIDSTVVDGSGAVIAGIRKGNRLPTVPKFQISASATYETEISDGIDWALTASYQ
HVGNRFTQLADQEPGAGSFTNSIFYDPATGAFGTGAYDFGSYRLPSYDLVNLSTSVNF
DHGLSVSVYVNNLLDKNALMSLDRERGGRARLGYNIGSPRKIGMTVRKEF"
misc_feature 385146..387452
/locus_tag="PP1Y_Mpl3846"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature 385209..387452
/locus_tag="PP1Y_Mpl3846"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(385209..385238,385266..385295,385326..385343,
385356..385367,385392..385403,385449..385481,
385515..385541)
/locus_tag="PP1Y_Mpl3846"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(386070..386072,386151..386153)
/locus_tag="PP1Y_Mpl3846"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 387806..388714
/locus_tag="PP1Y_Mpl3872"
/db_xref="GeneID:10718223"
CDS 387806..388714
/locus_tag="PP1Y_Mpl3872"
/inference="protein motif:COG:COG4957"
/note="KEGG: swi:Swit_5190"
/codon_start=1
/transl_table=11
/product="MucR family transcriptional regulator"
/protein_id="YP_004538293.1"
/db_xref="GI:334145084"
/db_xref="GeneID:10718223"
/translation="MPALAKVEEKAPTKPAAAKPAPAPKAEQPAAKAETAEAPKPAAA
VKPAVSAKESHSDPNFIVSLITGEKFKTLKRHLRKHGLTEAEYKTRYDLPADYPIVAR
AYSELRRKVAKNIDRSGQDTAVPAAKEAAPATAKTKAPAKAPAQAKPSAAKKTASKPK
VAAKSTAAKSATAAKAKSAPAAKAADTAAKPAAAAPEAKKDAAPAAAKAAPAKKATKA
PAKSRAKKAPAAKKAATAKTPAAQDSKKDAGAAASAPAAMPAPAANAASPAPESKSAA
APSTADSTASSKPARKDRPKLSPVFK"
misc_feature <387977..388150
/locus_tag="PP1Y_Mpl3872"
/note="Predicted transcriptional regulator
[Transcription]; Region: COG4957"
/db_xref="CDD:34565"
gene complement(388114..388764)
/locus_tag="PP1Y_Mpl3877"
/db_xref="GeneID:10718224"
CDS complement(388114..388764)
/locus_tag="PP1Y_Mpl3877"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538294.1"
/db_xref="GI:334145085"
/db_xref="GeneID:10718224"
/translation="MRGFLVQWLRLSGALPYYLKTGESFGRSLRAGFELAVLSAVEGA
AALLLSGAGLAALAAGAGIAAGADAAAPASFLLSWAAGVLAVAAFLAAGAFFARLFAG
ALVAFLAGAAFAAAGAASFLASGAAAAGLAAVSAAFAAGALLAFAAVALLAAVDFAAT
LGLLAVFLAAEGFACAGAFAGAFVLAVAGAASLAAGTAVSWPLRSMFLATLRRSSE"
gene complement(388838..390163)
/locus_tag="PP1Y_Mpl3883"
/db_xref="GeneID:10718225"
CDS complement(388838..390163)
/locus_tag="PP1Y_Mpl3883"
/EC_number="3.5.1.32"
/inference="protein motif:COG:COG1473"
/inference="similar to AA sequence:UniProt:B8H1R6"
/note="assigned by KAAS to KEGG Orthology:K01451 hippurate
hydrolase"
/codon_start=1
/transl_table=11
/product="hippurate hydrolase"
/protein_id="YP_004538295.1"
/db_xref="GI:334145086"
/db_xref="GeneID:10718225"
/translation="MKKSPLLLLLAGLAASPAVAAVPDPKADLARIDAVLDKNYPQLQ
ALYEDIHAHPEVAFQETRTAALLAARMRKLGFTVTEKVGGTGIVAIYRNGDGPTVLVR
TELDGLPVLEKTGLPYASHYTQEIDGKVTPTMHACGHDIHMTWWVATAEALLAMKDRW
HGTLMFIGQPAEETVSGAKAMLDDGLFTRFPKPDYGFAAHVSPEASGNVRFKEGTSSS
ASDQLRITFKGKGAHGSMPASSIDPIVMGGHFVSDVQSIRSREVDPGKFGVITVGSFH
AGTAPNIIPDTSVLQLTLRSHDPEVRQQLMDGVKKTADAVSAMAGAPEPQIDYLYGTA
ALYNDPKLADSVAAVVKEAVSGKVTVESEDKPAGSGSEDYSEFVTAGVPSVFVGIGGV
DADVLAGYVKKGERPPVNHSPFFAPDPEPAIRAGAQALSLAVLTVAGTD"
misc_feature complement(388841..390058)
/locus_tag="PP1Y_Mpl3883"
/note="Metal-dependent
amidase/aminoacylase/carboxypeptidase [General function
prediction only]; Region: AbgB; COG1473"
/db_xref="CDD:31662"
misc_feature complement(388856..390043)
/locus_tag="PP1Y_Mpl3883"
/note="M20 Peptidase Aminoacylase 1 subfamily; Region:
M20_Acy1_like6; cd05664"
/db_xref="CDD:193540"
misc_feature complement(order(388931..388933,389564..389566,
389645..389647,389747..389749,389753..389755))
/locus_tag="PP1Y_Mpl3883"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193540"
misc_feature complement(order(389285..389293,389309..389311,
389315..389320,389330..389350,389399..389401,
389408..389410,389417..389419,389429..389434,
389498..389500))
/locus_tag="PP1Y_Mpl3883"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:193540"
gene complement(390177..391499)
/locus_tag="PP1Y_Mpl3894"
/db_xref="GeneID:10718226"
CDS complement(390177..391499)
/locus_tag="PP1Y_Mpl3894"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B0SXI8"
/note="KEGG: cak:Caul_2646"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor plug"
/protein_id="YP_004538296.1"
/db_xref="GI:334145087"
/db_xref="GeneID:10718226"
/translation="MSRFLTLIVARQAALGSLPSTCSAYYGQSAACSADQQSDFSDYA
SSVLPAIGYQPAWLKSQNYEVRLASNGTNFIDWTIGGYYEHRKDHIDSNTTSVSPVDG
SVPDPLRNLSYRYVETKVRQLAGFGEVTLHPTDKLSLTGGLRYYDYTKTTGGEATLAS
PLTGSVLADYSREKASANGLIQKFNISYNFTPDFMAYASAAKGFRPGGANNIPILPDN
LIAYDADSLWNYEAGVKTSWLGGDVIFNAAVFQIDWSNMQLSARTADGLYSFLTNAGA
ARIRGGEVDLTVRPLSGLSLSVSGGYTDGKLTEDQANEDILVTASSGKKGDRLSNSPK
WSGAASAAYKWALSDRFDGLLRADFAYTGKMKSNVSRTDPYLTYYGDYATLNLRAGVE
NETWGMAVYVNNVTDTVGNVSQTNGFGYSNLTFSIQPRTFGVNFHFAM"
misc_feature complement(390186..>391226)
/locus_tag="PP1Y_Mpl3894"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature complement(390186..>391169)
/locus_tag="PP1Y_Mpl3894"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene 391646..393151
/locus_tag="PP1Y_Mpl3906"
/db_xref="GeneID:10718227"
CDS 391646..393151
/locus_tag="PP1Y_Mpl3906"
/inference="similar to AA sequence:UniProt:Q20XX3"
/note="KEGG: swi:Swit_5071"
/codon_start=1
/transl_table=11
/product="integrase catalytic subunit"
/protein_id="YP_004538297.1"
/db_xref="GI:334145088"
/db_xref="GeneID:10718227"
/translation="MAGRHINDHQVRLFMTNRRNNPVALAAAKAGFSPATGYRVLQDA
RLPSQRQTPRSRRRPDPLAGIFDEVVVPMLEAAPGLRPIAIFEELRRRYPETVFGSRR
TLERRIRDWRAMNGQDREVIFRQVHEAGRLGLSDFTCMDDLAVSIAGQPLDHLLYHFR
LPCGGFEHGHVILGGESFVALAEGLQNALWSAGGAPKLHRTDSLSAAFRNLDADAKID
LTRRYDALCAHYGMEPTRNNRGIAHENGAIESAHGHIKAAVKDALLLRGSGDFADLAD
YRRFIDEVVNARNRRHGPGIDAERKFLQPLPDVRTTDYEEILVTVTSSGGFTLRKVFY
TVPSRLIGHRLRVRLYDDRLDVFIGGTRLMTLPRGRAGMNGKHGHVVDYRHVIHSLRR
KPMALLGLVYRDSLFPRDAYRLMFDHLLEVQGEREACRTTVALLAMAHERACEAELAA
LLTEDLTARRTPCLTTLRARFSPDPADLPEVVVQLVPLSIYDGLIEQGEAA"
misc_feature 392111..392413
/locus_tag="PP1Y_Mpl3906"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
gene 393148..394017
/locus_tag="PP1Y_Mpl3921"
/db_xref="GeneID:10718228"
CDS 393148..394017
/locus_tag="PP1Y_Mpl3921"
/inference="protein motif:COG:COG1484"
/inference="similar to AA sequence:UniProt:P55500"
/note="KEGG: rhi:NGR234_166"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004538298.1"
/db_xref="GI:334145089"
/db_xref="GeneID:10718228"
/translation="MNAAPMIDAQRLSLMLNELRLPTIKHIWGDFAAQADKEGWPASR
FLAALAEHELAERDRRRIERHLAEAHLPAGKTLDCFAFDAVPMISKAQVMALCAGDGW
LEQGANLILFGPPGGGKTHLAAAIGLALVERGWRVLFTRTSDLVQRLQVARRELALES
AMARLDKYHLLILDDFAYVSRDQAETSVLFELISARYERRSLLITANQPFGEWNRVFP
DPAMTLAAVDRLVHHATIFEMNVESYRRRTAQARRTGAGRPAAYTTPKVLETIRDNQD
ENDDLASDNQNRH"
misc_feature 393163..393876
/locus_tag="PP1Y_Mpl3921"
/note="DNA replication protein [DNA replication,
recombination, and repair]; Region: DnaC; COG1484"
/db_xref="CDD:31673"
misc_feature 393451..393777
/locus_tag="PP1Y_Mpl3921"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 393484..393507
/locus_tag="PP1Y_Mpl3921"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(393487..393510,393667..393669,393766..393768)
/locus_tag="PP1Y_Mpl3921"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 393655..393672
/locus_tag="PP1Y_Mpl3921"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
gene complement(394043..395098)
/locus_tag="PP1Y_Mpl3930"
/db_xref="GeneID:10718230"
CDS complement(394043..395098)
/locus_tag="PP1Y_Mpl3930"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B0SXI8"
/note="KEGG: cak:Caul_2646"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor plug"
/protein_id="YP_004538299.1"
/db_xref="GI:334145090"
/db_xref="GeneID:10718230"
/translation="MKSSITMAALLAAVSAFPLTSMAQTSDAAATSESANEGVLASGD
IVVTALRRDSTLQETPISIAALSGDTLRDMGSSDLSGYFRQVPNLNVTQGQIGSSRIS
IRGVNAAGEATVGLYYDETPVTGPSGTTQDPGSVAANLNLFDVERVEVLRGPQGTLYG
ASSMAGTLRIIFKKPDASTYETAAEAEASAIDGGGTGYGAKAMVNIPIVEDKLAVRLV
GYYQKKPGFIDNVRYGDKNINDNTARGVRALIGYEPGPDTTVTATAIYEKSKADDLQG
WYPQVGRYKTDSRVRLPFRSEMQLYNLKADQDFGFATLTATGTYYKFNIVRAVDFTPA
VAACSATNWMRIARQSG"
misc_feature complement(394598..394936)
/locus_tag="PP1Y_Mpl3930"
/note="TonB-dependent Receptor Plug Domain; Region: Plug;
pfam07715"
/db_xref="CDD:203737"
gene complement(395444..397960)
/locus_tag="PP1Y_Mpl3938"
/db_xref="GeneID:10718231"
CDS complement(395444..397960)
/locus_tag="PP1Y_Mpl3938"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:B0SXI9"
/note="KEGG: cak:Caul_2647"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538300.1"
/db_xref="GI:334145091"
/db_xref="GeneID:10718231"
/translation="MARQALIVFLAWTCSTFAVPPALAATGRASLAEALQSLARRGHL
SILFRPETVSGLQVAKPGKPRNPEAALDELLRGTGLRARRIAPRTFIIERIEVAKFKG
PGEASVSSGERPAHVPPPSSIIVTALRRPTLLLDTPVSMIAIDGQEWSELAGRTNADV
ARLAPSLTITSQGAGLDRLSLRGVISAGEPSVGLYYGNVPVLGPSGSTSDPGLMTPNL
LLIDVDRIEVLRGPQGTLYGAGSLAGTMRVLFRQPDLDAYSVDVDGSVSSTKGGGVGF
DASSAINLPLVPGRAALRAVTYRRREAGFVDNVALGLVNIGKRDDAGARLAVKWEPDP
DWSLAIEGAYQKTVYDDFGSGSGDVGRNRTNRAVRLPFSSRFWMASAVVRGALGTTDV
ELSASRYRWLPRRSFDFTAVLEDLRGDPQACAGYFDRPAASGCTAAELTQFGSYLNSA
TPAVLDQPLRVSSTSAELRLSGRGALNWTTGFFFNRRTDKGESLTRRTDERGMIDATA
PLLSQRWFAGSLNQVAAFGDVTWNALERLHVTAGGRIFRYRRSASGESVLRNPATEVY
GSEGMQSYVYSVRGTVGRIRFDFYPRTDWLIYGELAQGFRPGGINIVPGLPSDAAVYL
GDRLVSREVGWRVSLARDAIQLSGAAFRQVWSDMEVSAITNNGAFGIISNLGSARIDG
VELGLKARAGGHFEANVQATYLDPRLTSDQVSEIAQATGRAGDRLGLVPPFIASGVLT
SRWDVGGDLAFKLALYGHFSSRHYSMTHRADDRTMRIGSAGSIDMRAILQGSAHSVTV
GVTNLTGSQDRIYASNLLIAPRTITRVRPRTVSIGFNASF"
misc_feature complement(397679..397831)
/locus_tag="PP1Y_Mpl3938"
/note="Secretin and TonB N terminus short domain; Region:
STN; smart00965"
/db_xref="CDD:198033"
misc_feature complement(395447..397648)
/locus_tag="PP1Y_Mpl3938"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature complement(395528..397543)
/locus_tag="PP1Y_Mpl3938"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene 398074..398574
/locus_tag="PP1Y_Mpl3963"
/db_xref="GeneID:10718232"
CDS 398074..398574
/locus_tag="PP1Y_Mpl3963"
/inference="protein motif:COG:COG1595"
/inference="similar to AA sequence:UniProt:B0SXJ0"
/note="assigned by KAAS to KEGG Orthology:K03088 RNA
polymerase sigma-70 factor, ECF subfamily"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-70 factor"
/protein_id="YP_004538301.1"
/db_xref="GI:334145092"
/db_xref="GeneID:10718232"
/translation="MSEPNKLHDAIFPHLPVLRQWLLRRLDRKEDVDDVVQDVWMRLC
RLPDQGVIDNPRAYLFRTAGSVVTDRFRRGAVRAANRHEELTEIRHPVEEITPERVLM
GKNEIERVVARIGMLPERTRDIFVLSRFENLNNKQIAAAMGISVSAIEKHMMKAMRAL
LEESDD"
misc_feature 398113..398562
/locus_tag="PP1Y_Mpl3963"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:211770"
misc_feature 398113..398292
/locus_tag="PP1Y_Mpl3963"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature 398422..398553
/locus_tag="PP1Y_Mpl3963"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(398425..398427,398455..398457,398473..398478,
398506..398508,398512..398517,398521..398529,
398533..398538,398542..398544)
/locus_tag="PP1Y_Mpl3963"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 398597..399559
/locus_tag="PP1Y_Mpl3969"
/db_xref="GeneID:10718233"
CDS 398597..399559
/locus_tag="PP1Y_Mpl3969"
/inference="protein motif:COG:COG3712"
/inference="similar to AA sequence:UniProt:B4RFZ1"
/note="KEGG: pzu:PHZ_c2395"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_004538302.1"
/db_xref="GI:334145093"
/db_xref="GeneID:10718233"
/translation="MSDEELAAFLRDASGEARSSGESRQALQEAEDLWNSLDTVRDDP
RILAMRSAARARLAANDGAEDGENMRFGGAKQRSPRPTLAPWAAIAACLLIVVGLGSY
IWTDRPGLTASQAVQVLANGREAPRTYRLADGSSVTLDAASRVEVALSDDARRLTLEQ
GRAFFDVAHDADRPFIVTSGDSSVTALGTRFMVSQQPDDPLVMLAQGKVRVADAVQTA
ELVPGEELSRDAGGSFVIARSDPAGASQWTTGAVSFDAEPVSQVLKKLNPYLARPLVL
DNPADTQARVSGTFQLGNDRDIRTGLEAMGIAVTQGQAPVAGRR"
misc_feature 398600..399511
/locus_tag="PP1Y_Mpl3969"
/note="Fe2+-dicitrate sensor, membrane component
[Inorganic ion transport and metabolism / Signal
transduction mechanisms]; Region: FecR; COG3712"
/db_xref="CDD:33507"
misc_feature 398945..399226
/locus_tag="PP1Y_Mpl3969"
/note="FecR protein; Region: FecR; pfam04773"
/db_xref="CDD:203087"
gene 399741..400526
/locus_tag="PP1Y_Mpl3979"
/db_xref="GeneID:10718234"
CDS 399741..400526
/locus_tag="PP1Y_Mpl3979"
/inference="similar to AA sequence:UniProt:Q2G433"
/note="assigned by KAAS to KEGG Orthology:K10094 nickel
transport system substrate-binding protein"
/codon_start=1
/transl_table=11
/product="nickel transport system substrate-binding
protein"
/protein_id="YP_004538303.1"
/db_xref="GI:334145094"
/db_xref="GeneID:10718234"
/translation="MLCSRKPRRRSLPRRSPFLLASTFASALALGFTSIAPADAHAIW
FAQRAKQLALIYGVGADDLDAVGRMKHLTLVKGYDEDWQPVETSLREAGIVPIVDSDE
PIAAMTAVMDYGVWTKDKAGSWHNTTKDEVADVALSEHNWKYALHFEKLPKKEVPLFE
GLVLQLVPVGPIPEDKGKPLKVRAYLNGKPMAGVQVMSDYVNDPDQIPVKTDADGTAT
ITLRNQGLNVLMGIYVGPSDQPTKYDQVEYRSSLSFVLPHLPE"
misc_feature 399852..400448
/locus_tag="PP1Y_Mpl3979"
/note="Domain of unknown function (DUF4198); Region:
DUF4198; pfam10670"
/db_xref="CDD:151174"
gene 400585..400983
/locus_tag="PP1Y_Mpl3992"
/db_xref="GeneID:10718235"
CDS 400585..400983
/locus_tag="PP1Y_Mpl3992"
/inference="similar to AA sequence:UniProt:Q2G434"
/note="KEGG: nar:Saro_2954"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538304.1"
/db_xref="GI:334145095"
/db_xref="GeneID:10718235"
/translation="MKTSAFSALFAASLLAAAPAAVIPGTAYAHGSMKPQHGGMVQMS
GETLFELVKGAKGVDVYISEEDEPLPASEFSAKLIVTSASGAKATTAMNAAKANRFAA
PGVKLQAGSKVVVSLVEKSSGTKTFATFKL"
gene complement(400905..401726)
/locus_tag="PP1Y_Mpl3996"
/db_xref="GeneID:10718236"
CDS complement(400905..401726)
/locus_tag="PP1Y_Mpl3996"
/inference="ab initio prediction:grc:1.0"
/inference="protein motif:COG:COG0419"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538305.1"
/db_xref="GI:334145096"
/db_xref="GeneID:10718236"
/translation="MSGSLGEVTGQLVADEDETGAHQRRVGSDGAALEAAAQSPDVHG
DEDQAQGHELPKFDADVEREEVRDHALGRERQILELGCKAEAMKQAEDEYRGTGIGRP
AEHRAKAVEVVDCLVGDGQPDDGIDDVGIGANVEDRTDQQRRAVPDREQRDVSPDVLH
PVEEKDDSGEEEQMVVTRDHVLRAEVHVRQDGDARTALDEGLVRFSHSVGLGRGGDRQ
RCQKRAGGCQRASGRGKAAGRCEGGRLHLRQSLKVAKVFVPLLFSTSETTTLDPA"
misc_feature 400989..401723
/note="potential protein location (conserved hypothetical
protein) that overlaps protein (hypothetical protein)"
gene 401725..402336
/locus_tag="PP1Y_Mpl4004"
/db_xref="GeneID:10718237"
CDS 401725..402336
/locus_tag="PP1Y_Mpl4004"
/inference="similar to AA sequence:UniProt:Q2G436"
/note="KEGG: nar:Saro_2952"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538307.1"
/db_xref="GI:334145097"
/db_xref="GeneID:10718237"
/translation="MATTYPADIAALPRNVQASPATLAKACIGAAVAAGGVLTLFVLP
AEYGIDPTGIGARLGISGMAVMEEDEDSAPVSTGPAASLVTPTRASIERATAWREDEL
TLDLPPHSGAEIKAHMVKGDSFVFSWHSTGGPVKVDMHGEPVNAADDEFTSYWKERQS
EAGQGDFTATFDGTHGWYWRNKSDTPVKVTVKVAGFYKDLFKP"
gene 402853..405006
/locus_tag="PP1Y_Mpl4013"
/db_xref="GeneID:10718239"
CDS 402853..405006
/locus_tag="PP1Y_Mpl4013"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:Q2G438"
/note="KEGG: nar:Saro_2950"
/codon_start=1
/transl_table=11
/product="TonB-dependent siderophore receptor"
/protein_id="YP_004538308.1"
/db_xref="GI:334145098"
/db_xref="GeneID:10718239"
/translation="MRIFNSAVHASLLAGTALVAFPAIAMADEAANDTETADTITVVG
QRQQYRGDVPLAEIPQSVQQIDGKMLQDLNITRLDSALDLASGISRQNNFGGLWDAFA
VRGFAGDENFPSGFLVNGFNGGRGYGGPRDASNIERIEVLKGPNGAVFGRGEPGGTVN
IITKKATLDDTFGSFAASAGSFSTYRVEGDYNLALNDKVAIRLNGAAQDAGSFRDTIN
SNKIVASPSVLFEPSSSTSISYEMEFVDQEVPFDRGVVAVDGVLGLIPRSTFLGEPGD
GPTKVKVLGHQVQLQQDLAKDWVFLAGFGYRDTSFKGYSSDAELAGSRQTLEETGNYL
ARQRRYRDYGTTNLVFRGEVSGKLYTGSIAHHVLVGADWDRFKINLHQLRFRPGPYTA
GDPITAANNAIDIYNPVYGQLPVPTAVIQNSNETQKSWGVYFQDQIDITDAFKIRGGG
RYDHFRQQIVNNINGTTTVIIKKRFSPTIGALYQLTDTLSLYASYGTGFRPNSGIDFA
GNPFAPETSKSYEAGLRFVSPDDMITATLAAYTMKKNNILTSDPINAGFSLAAGKARS
RGIEADVNAKLPGGINVYATYAYTDAEWTSAALDVSFGLNIQSGDPLINIPKHAANLL
VTKEFDLGDAGVVTIGGGVNYTSKRLGETGVDFYLPDYTLVRALASYAPSDGVKLSVD
ATNLFDVTYYPASYHRYWVSPGQPRTVTFRVDFSF"
misc_feature 403021..405003
/locus_tag="PP1Y_Mpl4013"
/note="TonB-dependent siderophore receptor; Region:
TonB-siderophor; TIGR01783"
/db_xref="CDD:162535"
misc_feature 403033..405003
/locus_tag="PP1Y_Mpl4013"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(403033..403062,403090..403119,403153..403170,
403198..403221,403249..403281,403315..403341)
/locus_tag="PP1Y_Mpl4013"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(403783..403785,403879..403881)
/locus_tag="PP1Y_Mpl4013"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 405080..406135
/locus_tag="PP1Y_Mpl4030"
/db_xref="GeneID:10718240"
CDS 405080..406135
/locus_tag="PP1Y_Mpl4030"
/inference="protein motif:COG:COG3182"
/inference="similar to AA sequence:UniProt:Q2G439"
/note="KEGG: nar:Saro_2949"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538309.1"
/db_xref="GI:334145099"
/db_xref="GeneID:10718240"
/translation="MKPGTFLRIHRWIALAFAPLLLIQALTGTMILFREPLAQTLDPG
AMTRQSSHDMQPAPLSQLLEAAGARFPTMRVTRLFMPSGPDAAAFAQLTGAQGEVRYA
SIDPGNARVLAAGPIWRFPIEAALQIHYRLLGDWLGIAIVTLNGLALFLIGVSGVKHW
WPGRGRIVASLKVRRNLPSRIKLRLYHRSAGAIASILILFSATTGVLLAAADLPLGPA
PASAAPARTITLSSGQVDNAISLLHARLPEARMRDIRIGPDGTLAINLLAPEAGPRAV
DVVQIDATGPSLDKVLKSDDNPALWLTVLPLHAGDSFGLPGRLLLMAEALALIFLCIS
GPLQWWRARSSRPGAKK"
misc_feature 405092..405196
/locus_tag="PP1Y_Mpl4030"
/note="PepSY-associated TM helix; Region: PepSY_TM_3;
pfam13706"
/db_xref="CDD:205881"
misc_feature 405101..406108
/locus_tag="PP1Y_Mpl4030"
/note="Uncharacterized iron-regulated membrane protein
[Function unknown]; Region: PiuB; COG3182"
/db_xref="CDD:32995"
misc_feature 405458..405697
/locus_tag="PP1Y_Mpl4030"
/note="PepSY-associated TM helix; Region: PepSY_TM_2;
pfam13703"
/db_xref="CDD:205878"
gene 406132..407061
/locus_tag="PP1Y_Mpl4039"
/db_xref="GeneID:10718242"
CDS 406132..407061
/locus_tag="PP1Y_Mpl4039"
/EC_number="1.1.1.79"
/EC_number="1.1.1.81"
/inference="protein motif:COG:COG0111"
/inference="similar to AA sequence:UniProt:Q2G440"
/note="assigned by KAAS to KEGG Orthology:K12972
gyoxylate/hydroxypyruvate reductase A"
/codon_start=1
/transl_table=11
/product="gyoxylate/hydroxypyruvate reductase A"
/protein_id="YP_004538310.1"
/db_xref="GI:334145100"
/db_xref="GeneID:10718242"
/translation="MTSILHCGDEERGTLWREIFAREMPEVDFRCWPELGDPQDIRFL
VAWTLTPELIASLPNLEILFSIGAGVDQLDLELVPPHVRVVRMIEPGITVTMAQFIVM
ATLALHRDLPFYVAEQRAGRWTQRDVLLCSERTVGFLGLGELARASIKALAPLDFNLL
GWSRSGADIAGVDTYAGADGLDPFLARCDILVCLLPLTDETRGILCRNLFDRLPRGAA
IINAARGGHLVAEDLCAALDEGQLSAAFLDVASPEPLPQDHPFYSHPAIFLTPHVAGV
TRRETAVHSLMGNLRRVLAGQEPDGEVDRSRGY"
misc_feature 406156..407058
/locus_tag="PP1Y_Mpl4039"
/note="Phosphoglycerate dehydrogenase and related
dehydrogenases [Amino acid transport and metabolism];
Region: SerA; COG0111"
/db_xref="CDD:30460"
misc_feature 406432..406953
/locus_tag="PP1Y_Mpl4039"
/note="D-isomer specific 2-hydroxyacid dehydrogenase, NAD
binding domain; Region: 2-Hacid_dh_C; pfam02826"
/db_xref="CDD:202418"
gene 407216..407908
/locus_tag="PP1Y_Mpl4053"
/db_xref="GeneID:10718243"
CDS 407216..407908
/locus_tag="PP1Y_Mpl4053"
/EC_number="3.8.1.2"
/inference="similar to AA sequence:UniProt:A1BBY4"
/note="assigned by KAAS to KEGG Orthology:K01560
2-haloacid dehalogenase"
/codon_start=1
/transl_table=11
/product="2-haloacid dehalogenase"
/protein_id="YP_004538311.1"
/db_xref="GI:334145101"
/db_xref="GeneID:10718243"
/translation="MTSASSSFTPPFRPKYISFDCYGTLIRFHMSEMAREFFADRIPA
EAMDHMCSVFSTYRFDETLGAWKPYREVIRNAVRRTAKKFGVEYREADADSIYDMVPK
WGPHPDVPGGLSKIADKIPLVILSNAMNDQIPHNVALLGAPFHRVYTAESAQAYKPRM
QAFEYMFDQLGCGPEVMMHVSSSFRYDQNTATDLGFGCRVFVGRGHEPSNANYRDVEI
PHIGCLPAVVGL"
misc_feature 407255..407839
/locus_tag="PP1Y_Mpl4053"
/note="2-haloalkanoic acid dehalogenase, type II; Region:
HAD_type_II; TIGR01428"
/db_xref="CDD:130495"
misc_feature 407261..407791
/locus_tag="PP1Y_Mpl4053"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:212620"
gene 407859..409571
/locus_tag="PP1Y_Mpl4059"
/db_xref="GeneID:10718244"
CDS 407859..409571
/locus_tag="PP1Y_Mpl4059"
/inference="protein motif:COG:COG0747"
/inference="similar to AA sequence:UniProt:Q48BY0"
/note="assigned by KAAS to KEGG Orthology:K02035
peptide/nickel transport system substrate-binding protein"
/codon_start=1
/transl_table=11
/product="peptide/nickel transport system
substrate-binding protein"
/protein_id="YP_004538312.1"
/db_xref="GI:334145102"
/db_xref="GeneID:10718244"
/translation="MSKFRTSVACPRSSASEHRRCDFASHPPRLAPTVPPIGQARGVG
GGNQARGLQAMLIGGNSLSRRSVIGAGLAGAGLLALGGCAGGERKATPKKGGSIRVAT
QAASTADTLDPAKGALATDYTRHFMLYNGLTCIEDESLVPRPSLAKSIDSADRITWHF
ELERGVRFHDGSELTAQDVVFSLLRHKDPAVGSKMETIAAQFADVRSDGRYGVTIRLT
GANADLPTILAQSHFLVVRAGQNAPDGNGTGAFRLAEFQPGVRTVVVRNEEYWIPGRP
HLERVELIAIPDEVSRVNALLSGDIQLCNAINPRSTRRIEADPRYATMATPSALFTDL
IMRQDQLPTGNPDFVQAVKLMIDRPLIKRALFRNYATIANDQPIAPFQPYFNPDVPQT
VLDLDKARWHIQRSGLTGVRMPIFAATAAEGSVDMASILQEYGSKVGLNFAVNRVPAD
GYWSTHWMRHPMTFGNCNPRPTADLIFSLFFDSKANWNESGWKNERFDRLLIEARGEA
DEARRAELYGEMQRIVHDKCGVAIPVFISLLDGHDRRLKGLVPVPLGAFMGYRFAEYA
WWED"
misc_feature 408132..409505
/locus_tag="PP1Y_Mpl4059"
/note="The substrate-binding component of an
uncharacterized ABC-type
nickel/dipeptide/oligopeptide-like import system contains
the type 2 periplasmic binding fold; Region:
PBP2_NikA_DppA_OppA_like_17; cd08503"
/db_xref="CDD:173868"
misc_feature 408282..409325
/locus_tag="PP1Y_Mpl4059"
/note="Bacterial extracellular solute-binding proteins,
family 5 Middle; Region: SBP_bac_5; pfam00496"
/db_xref="CDD:201265"
gene 409556..410551
/locus_tag="PP1Y_Mpl4076"
/db_xref="GeneID:10718245"
CDS 409556..410551
/locus_tag="PP1Y_Mpl4076"
/inference="protein motif:COG:COG0601"
/inference="similar to AA sequence:UniProt:Q2G444"
/note="assigned by KAAS to KEGG Orthology:K02033
peptide/nickel transport system permease protein"
/codon_start=1
/transl_table=11
/product="peptide/nickel transport system permease"
/protein_id="YP_004538313.1"
/db_xref="GI:334145103"
/db_xref="GeneID:10718245"
/translation="MVGRLMAAPAKTQSSLAKLAPLIIRRVLSSLLTLFLVSLVIFTV
SGLLPGDAAQEVLGQSATEEQVAALRHDMGLDRPAHVRYVAWLGGIVRGDPGMSYVAN
MPVSQIISDRLPNSLTLAAITAVISTVLALIIGISSAINRGGRLDSALNVTTLSLVAM
PEFLIATLGVLIFSVKLLWLPSIALVTPEASWSAMLRSMALPVFSLTCVVVAQMARMT
RAAVADQLDRPYVEMAKLKGVPFSRIVLFHVMPNAVGPVVNAMALSLSYLMGGAIIVE
TIFNFPGLASLMVNAVTSRDMPLLQSCAMIFCATYLALMLVADIVAILANPRLRA"
misc_feature 409694..410545
/locus_tag="PP1Y_Mpl4076"
/note="dipeptide transporter permease DppB; Provisional;
Region: PRK10914"
/db_xref="CDD:182834"
misc_feature 409892..410503
/locus_tag="PP1Y_Mpl4076"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(409940..409945,409952..409957,409970..409972,
410003..410014,410018..410047,410054..410059,
410063..410065,410180..410185,410189..410191,
410195..410197,410204..410209,410213..410215,
410225..410230,410237..410239,410288..410290,
410330..410335,410342..410344,410363..410374,
410381..410386,410420..410425,410453..410458,
410465..410470,410474..410479,410486..410491,
410498..410503)
/locus_tag="PP1Y_Mpl4076"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(410021..410065,410363..410380)
/locus_tag="PP1Y_Mpl4076"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(410063..410065,410165..410167,410381..410383,
410414..410416,410423..410425,410453..410455)
/locus_tag="PP1Y_Mpl4076"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(410240..410278,410294..410299,410309..410311)
/locus_tag="PP1Y_Mpl4076"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 410548..411372
/locus_tag="PP1Y_Mpl4081"
/db_xref="GeneID:10718246"
CDS 410548..411372
/locus_tag="PP1Y_Mpl4081"
/inference="protein motif:COG:COG1173"
/inference="similar to AA sequence:UniProt:B6A1K0"
/note="assigned by KAAS to KEGG Orthology:K02034
peptide/nickel transport system permease protein"
/codon_start=1
/transl_table=11
/product="peptide/nickel transport system permease"
/protein_id="YP_004538314.1"
/db_xref="GI:334145104"
/db_xref="GeneID:10718246"
/translation="MSTKLTTFLRGLPVSGRIGLALVVFWLVVALVGPWLAPYSVGAF
VDQDVFSGISSQFWLGSDYLGRDVLSRVLWGSRYTVFLALGAAMIAVCIGTSFALLAA
IRGGWTDEVISRAMDTFISIPSKIFALVLVAAFGSSLSLLLVIAAATYVPGNFRIARA
LAMNLVALDFVQVARARGEGSVHIALREVLPNMIHPLLADTGLRFVFVVLLLSGLSFL
GLGVQPPHADLGSLVRENISGITEGALAIIVPALAIATLTVGANLLIDALKPGGKA"
misc_feature 410644..411354
/locus_tag="PP1Y_Mpl4081"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppC; COG1173"
/db_xref="CDD:31366"
misc_feature 410776..>411144
/locus_tag="PP1Y_Mpl4081"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(410821..410826,410833..410838,410851..410853,
410881..410892,410896..410925,410932..410937,
410941..410943,410992..410997,411001..411003,
411007..411009,411016..411021,411025..411027,
411037..411042,411049..411051,411100..411102,
411142..411144)
/locus_tag="PP1Y_Mpl4081"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature 410899..410943
/locus_tag="PP1Y_Mpl4081"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(411052..411090,411106..411111,411121..411123)
/locus_tag="PP1Y_Mpl4081"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 411369..413183
/locus_tag="PP1Y_Mpl4093"
/db_xref="GeneID:10718247"
CDS 411369..413183
/locus_tag="PP1Y_Mpl4093"
/inference="protein motif:COG:COG1123"
/inference="similar to AA sequence:UniProt:A6VZV2"
/note="assigned by KAAS to KEGG Orthology:K02032
peptide/nickel transport system ATP-binding protein"
/codon_start=1
/transl_table=11
/product="peptide/nickel transport system ATP-binding
protein"
/protein_id="YP_004538315.1"
/db_xref="GI:334145105"
/db_xref="GeneID:10718247"
/translation="MNAPAVEVSGLVIDVARPDGTRKAIVEDVSFAIPKGEVLALIGE
SGSGKTTIALSMMGYSRFGARISAECIRVGDMRIDRMAESELPTIRGRRISYIAQSAA
AAFNPSRPIMAQVIEPLLVHRLADRRTAEAKAVEIFRSLALPSPETIGQRYPHQVSGG
QLQRLMAAMALITDPELVILDEPTTALDVTTQVEVLRTFKSAIAASGATAIYVSHDLA
VVAQVADRIVVLKNGRTSEEGTAEQILEAPSSDYTKSLLAAAHPAVRPSADASEDNVL
TVSAIRAGYGRIVDGQPAIPVLSNVGFTLKRGATIGVIGESGSGKSTLARVIAGLLPA
AGGEVQLDDDVLPADMADRSREQLRRIQMVFQNADTALNPAHTVGEILSRPLAFYHGL
KGSAAAARVAELLDIIQLPRGLETRRSTELSGGQKQRVNLARALAAEPDVLLCDEVTS
ALDTVVGAAILDLIDELRRKLGIATVFISHDISTVKAFCDKMLVLYSGTAVELSRQSE
FAGAIRHPYTRLLVDSVPDMDRGWLTHRAAVERAAMPGASLRNAAGEALCRFLPRCPA
AIAGTCDAVPAPLRESEGQAILCHHTLADLSSAGSAEI"
misc_feature 411369..412961
/locus_tag="PP1Y_Mpl4093"
/note="ATPase components of various ABC-type transport
systems, contain duplicated ATPase [General function
prediction only]; Region: COG1123"
/db_xref="CDD:31320"
misc_feature 411384..412085
/locus_tag="PP1Y_Mpl4093"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature 411495..411518
/locus_tag="PP1Y_Mpl4093"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature order(411504..411509,411513..411521,411663..411665,
411909..411914,412011..412013)
/locus_tag="PP1Y_Mpl4093"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature 411654..411665
/locus_tag="PP1Y_Mpl4093"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature 411837..411866
/locus_tag="PP1Y_Mpl4093"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature 411897..411914
/locus_tag="PP1Y_Mpl4093"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature 411921..411932
/locus_tag="PP1Y_Mpl4093"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature 411999..412019
/locus_tag="PP1Y_Mpl4093"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature 412191..412874
/locus_tag="PP1Y_Mpl4093"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature 412311..412334
/locus_tag="PP1Y_Mpl4093"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature order(412320..412325,412329..412337,412464..412466,
412704..412709,412806..412808)
/locus_tag="PP1Y_Mpl4093"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature 412455..412466
/locus_tag="PP1Y_Mpl4093"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature 412632..412661
/locus_tag="PP1Y_Mpl4093"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature 412692..412709
/locus_tag="PP1Y_Mpl4093"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature 412716..412727
/locus_tag="PP1Y_Mpl4093"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature 412794..412814
/locus_tag="PP1Y_Mpl4093"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature 412869..413078
/locus_tag="PP1Y_Mpl4093"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; pfam08352"
/db_xref="CDD:203916"
gene 413337..414191
/locus_tag="PP1Y_Mpl4111"
/db_xref="GeneID:10718248"
CDS 413337..414191
/locus_tag="PP1Y_Mpl4111"
/inference="protein motif:COG:COG0454"
/inference="similar to AA sequence:UniProt:Q2G451"
/note="KEGG: nar:Saro_2937"
/codon_start=1
/transl_table=11
/product="GCN5-like N-acetyltransferase"
/protein_id="YP_004538316.1"
/db_xref="GI:334145106"
/db_xref="GeneID:10718248"
/translation="MVVATKAPNVLRDMSVEDLHRTVELSAEQSWPHRTEDWELFYEL
GEGIVAECEGKVVGSIMAWRFGGNYASIGMVIVTADKQGEGIGRQLMEAMLERLEGWN
ITLNATAEGLPLYTKLGFEPFATVHQHQGLAPTMPLADLRPGERVRPMGATDNMLPAI
YSQTLGMDRDAFFERISRDSQSVVLSRDHEPVGFALLRRFGRGRVIAPIVAPDLGGAQ
ALVTHWLGAKAGRFCRIDALVGTGLSEWLEDIGLPCVGKVTTMVRGKAPKGSGPAKVF
AVASQAFG"
misc_feature 413478..413648
/locus_tag="PP1Y_Mpl4111"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(413559..413567,413595..413600)
/locus_tag="PP1Y_Mpl4111"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 414191..415663
/locus_tag="PP1Y_Mpl4119"
/db_xref="GeneID:10718249"
CDS 414191..415663
/locus_tag="PP1Y_Mpl4119"
/EC_number="1.2.1.16"
/inference="protein motif:COG:COG1012"
/inference="similar to AA sequence:UniProt:B1Y1H1"
/note="assigned by KAAS to KEGG Orthology:K00135
succinate-semialdehyde dehydrogenase (NADP+)"
/codon_start=1
/transl_table=11
/product="succinate-semialdehyde dehydrogenase"
/protein_id="YP_004538317.1"
/db_xref="GI:334145107"
/db_xref="GeneID:10718249"
/translation="MLELRDPSLLRQAALISGEWLVADKASGIAVDNPADGSLVGMVP
PCGRSETQAAIDAAMAAWPDWRARTAGERCALVERWHALVLENADDLARIMTAEQGKP
LAEAQGEIRYAATFIKWFAEEGRRVGARNVTSPERDRRILVLTEPVGPSAIITPWNFP
AAMITRKCAPALAAGCPVIIKPSEFTPFSALAMAELALRAGIPAGLIHVLTGMPQEIG
ETFAASPDVRKLSFTGSTRVGSLLMRQCADTIKRISLELGGNAPLIVFEDADLDLAVK
AAMVSKFRNSGQTCVCANRIFVQSSVHDEFAARLSAAVSALHAAPGFEAGATVGPLIN
AAAVTKVSEHVADALDRGGRLVASGSGREDGNFVRPVVITDAHADMRLASEETFGPVA
PLFRFEDEAQAIAMANDTPYGLASYFYTRDLSRSFRVAEALEAGMVALNTGSIAMEVA
PFGGVKASGLGREGGTAGIEEYLETKAFHIGGLELQEAQA"
misc_feature 414191..415639
/locus_tag="PP1Y_Mpl4119"
/note="succinic semialdehyde dehydrogenase; Region:
PLN02278"
/db_xref="CDD:177917"
misc_feature 414281..415630
/locus_tag="PP1Y_Mpl4119"
/note="Mitochondrial succinate-semialdehyde dehydrogenase
and ALDH family members 5A1 and 5F1-like; Region:
ALDH_F5_SSADH_GabD; cd07103"
/db_xref="CDD:143421"
misc_feature order(414395..414397,414422..414424,414545..414547,
414554..414559,414563..414589,414605..414613,
414626..414628,414872..414874,414908..414910,
414920..414922,414929..414931,415100..415102,
415112..415114,415250..415252,415451..415453,
415457..415462,415472..415474,415478..415480,
415487..415489,415493..415513,415529..415531,
415538..415543,415559..415561,415574..415576,
415610..415630)
/locus_tag="PP1Y_Mpl4119"
/note="tetramerization interface [polypeptide binding];
other site"
/db_xref="CDD:143421"
misc_feature order(414650..414664,414686..414688,414731..414733,
414737..414742,414884..414895,414902..414904,
414911..414916,414956..414964,415058..415060,
415346..415348,415352..415354,415430..415432,
415544..415546)
/locus_tag="PP1Y_Mpl4119"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:143421"
misc_feature order(414662..414664,414956..414958,415049..415051,
415058..415060)
/locus_tag="PP1Y_Mpl4119"
/note="catalytic residues [active]"
/db_xref="CDD:143421"
gene 415660..416736
/locus_tag="PP1Y_Mpl4131"
/db_xref="GeneID:10718250"
CDS 415660..416736
/locus_tag="PP1Y_Mpl4131"
/EC_number="1.1.1.93"
/inference="protein motif:COG:COG0473"
/inference="similar to AA sequence:UniProt:A3M2Y8"
/note="assigned by KAAS to KEGG Orthology:K00056 tartrate
dehydrogenase"
/codon_start=1
/transl_table=11
/product="tartrate dehydrogenase"
/protein_id="YP_004538318.1"
/db_xref="GI:334145108"
/db_xref="GeneID:10718250"
/translation="MSAKRRYSIAVLPGDGIGKEVMPEGTRALEAAASAHGFELDLQW
HDFASCDYYAKHGQMMPDDWKDRIGKVDAIFFGAVGWPDTVPDHVSLWQSLLQFRREF
DQYVNLRPVRLMPGVPCPLAGRKPGDIDFWVVRENTEGEYSSVGGHMFPGTDREIVIQ
ETVMTRHGVDRVLRYAFDLAAKRERRHVTSATKSNGIAITMPFWDKRVEAIGAEYPGV
THDKYHIDILTAQFVMNPQRFDVVVASNLFGDILSDLGPACTGTIGVAPSANINPDGT
HPSLFEPVHGSAPDIAGKGIANPVGQIWSASMMLEHLGEAEAAASIMRAIEATLASEN
GRTGDLGGKANTVSCGKAVASLIG"
misc_feature 415669..416730
/locus_tag="PP1Y_Mpl4131"
/note="Isocitrate/isopropylmalate dehydrogenase; Region:
Iso_dh; cl00445"
/db_xref="CDD:212218"
misc_feature 415672..416697
/locus_tag="PP1Y_Mpl4131"
/note="tartrate dehydrogenase; Provisional; Region:
PRK08194"
/db_xref="CDD:181281"
gene 416856..418265
/locus_tag="PP1Y_Mpl4145"
/db_xref="GeneID:10718251"
CDS 416856..418265
/locus_tag="PP1Y_Mpl4145"
/inference="protein motif:COG:COG0161"
/inference="similar to AA sequence:UniProt:B2JSP3"
/note="KEGG: nar:Saro_2934"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538319.1"
/db_xref="GI:334145109"
/db_xref="GeneID:10718251"
/translation="MENAPSRTPAHRSNQSLVDLDRQHLIHPVTSFRGHEAHGARVLA
SGDGMWLTDIEGKKVLDAFAGLWCVNVGYGQESIVEVAMEQMRRLPYATGYFHFGSEP
AILLADKLASLAPEGLDHVYFTLGGSDAVDSAIRYITHYFNAIGKPEKKQFIALEWGY
HGSSSNGAGLTALANFHRGFDLPRPWQHHIASPYPYRHPEGHDDAAVIASTVAAIEAK
VAELGADKVAAFCCEPIQGSGGVIVPPRGWLKAIRETCDRLGILMLVDEVITGFGRTG
PMFACDDEGVSPDFLTLAKGLTAGYAPMGAVLMADHVYQSIADSAPAALPVGHGFTYS
GHPVSAAVGLEVIRLYENGLLENGQKTGKRFDHHLDRIRAHPLVGDTRGRGLLGAIEL
VSNKETKAGFAPELDIAGRLSQLTWENDVIVRCFANAVIGFAPALCCSENEMDLIFER
VERSLDQLLEMPDVRQALG"
misc_feature 416895..418259
/locus_tag="PP1Y_Mpl4145"
/note="hypothetical protein; Provisional; Region:
PRK05965"
/db_xref="CDD:180330"
misc_feature 416904..418220
/locus_tag="PP1Y_Mpl4145"
/note="Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The major
groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase;
Region: OAT_like; cd00610"
/db_xref="CDD:99735"
misc_feature order(417231..417239,417333..417338,417342..417344,
417552..417554,417651..417653,417657..417662,
417738..417740)
/locus_tag="PP1Y_Mpl4145"
/note="inhibitor-cofactor binding pocket; inhibition site"
/db_xref="CDD:99735"
misc_feature order(417234..417239,417333..417338,417552..417554,
417651..417653,417660..417662,417738..417740)
/locus_tag="PP1Y_Mpl4145"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature 417738..417740
/locus_tag="PP1Y_Mpl4145"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene 418278..418766
/locus_tag="PP1Y_Mpl4157"
/db_xref="GeneID:10718253"
CDS 418278..418766
/locus_tag="PP1Y_Mpl4157"
/inference="protein motif:COG:COG1522"
/inference="similar to AA sequence:UniProt:Q2G455"
/note="KEGG: nar:Saro_2933"
/codon_start=1
/transl_table=11
/product="AsnC family transcriptional regulator"
/protein_id="YP_004538320.1"
/db_xref="GI:334145110"
/db_xref="GeneID:10718253"
/translation="MALGPKLDRIDLKILAMLQQCGRITNVELSDAVGLSPSPCLTRV
KRLESAGYITGYGAHINLNKLGEFLTVFTEVTLSEHRRGDFSRFEMRIAKIDEIVECH
LVSGGYDYLLKFAARGVTHYQSLIEEMLESDYGIEKYFSYVVIKSPFIKHHFPIQNLF
GE"
misc_feature 418290..418745
/locus_tag="PP1Y_Mpl4157"
/note="Transcriptional regulators [Transcription]; Region:
Lrp; COG1522"
/db_xref="CDD:31711"
misc_feature 418299..>418454
/locus_tag="PP1Y_Mpl4157"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature order(418302..418310,418350..418358,418383..418394,
418398..418403,418410..418415,418419..418424,
418440..418448)
/locus_tag="PP1Y_Mpl4157"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(418350..418352,418359..418361)
/locus_tag="PP1Y_Mpl4157"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
misc_feature 418497..418718
/locus_tag="PP1Y_Mpl4157"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:189815"
gene 418786..419934
/locus_tag="PP1Y_Mpl4162"
/db_xref="GeneID:10718254"
CDS 418786..419934
/locus_tag="PP1Y_Mpl4162"
/EC_number="3.5.1.32"
/inference="protein motif:COG:COG1473"
/inference="similar to AA sequence:UniProt:Q4ZQL7"
/note="assigned by KAAS to KEGG Orthology:K01451 hippurate
hydrolase"
/codon_start=1
/transl_table=11
/product="hippurate hydrolase"
/protein_id="YP_004538321.1"
/db_xref="GI:334145111"
/db_xref="GeneID:10718254"
/translation="MNDIADLLQPLIAFRRDIHAHPELGFAEHRTAQRIAEQLREIGL
EVHEGIGGTGIVAVLRSGDGKRTLGLRADMDALPIEEQTNAAWSSTVPGCFHGCGHDG
HVAMLLGAAQVLARDPGFSGTLNFIFQPAEEGLGGARHMIEDGLFDRFDCERVYALHN
WPGLPAGTIATRPGAIMGAADKFKIILEGKGGHAALPQDTPDTILAAASLVQQLNSII
GRDIPPSANAVLSVTEIAGGHAHNVLPASVRIGGTVRSFDPVVQDRIEERMRQMIKGI
ETSFEVRSSLEYDRYYPATINDTDAAGDALDIAATVANAQLAPEPAPTSEDFSFMLQE
RPGAYLWLGQGRGDNPPPLHNPHYDFNDDVMETGIRLHVALARHWLQD"
misc_feature 418786..419928
/locus_tag="PP1Y_Mpl4162"
/note="Metal-dependent
amidase/aminoacylase/carboxypeptidase [General function
prediction only]; Region: AbgB; COG1473"
/db_xref="CDD:31662"
misc_feature 418810..419919
/locus_tag="PP1Y_Mpl4162"
/note="M20 Peptidase Aminoacylase 1 subfamily; Region:
M20_Acy1_like1; cd05666"
/db_xref="CDD:193542"
misc_feature order(419077..419079,419083..419085,419182..419184,
419260..419262,419845..419847)
/locus_tag="PP1Y_Mpl4162"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193542"
misc_feature order(419329..419331,419395..419400,419410..419412,
419419..419421,419428..419430,419479..419499,
419509..419514,419518..419520,419536..419544)
/locus_tag="PP1Y_Mpl4162"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:193542"
gene complement(419968..420378)
/locus_tag="PP1Y_Mpl4172"
/db_xref="GeneID:10718255"
CDS complement(419968..420378)
/locus_tag="PP1Y_Mpl4172"
/inference="protein motif:COG:COG3667"
/inference="similar to AA sequence:UniProt:Q2G457"
/note="KEGG: nar:Saro_2931"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538322.1"
/db_xref="GI:334145112"
/db_xref="GeneID:10718255"
/translation="MRNDFRAGRDLGHAALGVELQITPAIAGEHYLWLSQDGDVTGAA
MIVGTLAFGEALRLEPRVAIGWSAQSIPAEEVGAGIGELELSARLRHQIGPVLNVYGG
IIDERLVGQTRRIARAQGDDGHVTRAVIGLGLNF"
misc_feature complement(419971..>420378)
/locus_tag="PP1Y_Mpl4172"
/note="Copper resistance protein B precursor (CopB);
Region: CopB; cl01476"
/db_xref="CDD:194144"
gene 420889..421275
/locus_tag="PP1Y_Mpl4185"
/db_xref="GeneID:10718256"
CDS 420889..421275
/locus_tag="PP1Y_Mpl4185"
/inference="protein motif:COG:COG2372"
/inference="similar to AA sequence:UniProt:A5V9K8"
/note="KEGG: nar:Saro_2925"
/codon_start=1
/transl_table=11
/product="copper resistance protein CopC"
/protein_id="YP_004538323.1"
/db_xref="GI:334145113"
/db_xref="GeneID:10718256"
/translation="MPRLTVTSALASLAALALVVPGVAMAHPKLVSSTPAADSSVAKP
TEITLNFNETLVAPLSGIELVMTGMPGMANHKPMPISGFTTKAEGKSIKVKLPRALPA
GSYTLNWHAVAADQHRIEGSYNFTVR"
misc_feature 420967..421269
/locus_tag="PP1Y_Mpl4185"
/note="CopC domain; Region: CopC; pfam04234"
/db_xref="CDD:202938"
gene 421473..422135
/locus_tag="PP1Y_Mpl4190"
/db_xref="GeneID:10718257"
CDS 421473..422135
/locus_tag="PP1Y_Mpl4190"
/inference="protein motif:COG:COG1276"
/inference="similar to AA sequence:UniProt:Q2G464"
/note="KEGG: nar:Saro_2924"
/codon_start=1
/transl_table=11
/product="copper resistance D"
/protein_id="YP_004538324.1"
/db_xref="GI:334145114"
/db_xref="GeneID:10718257"
/translation="MAATSLTDLDAATVTAVLGATPLGDVLIIRSAALAALVLLALAV
PRHAVLAPLGALALATCAWTGHAGAGEGTLGALHEVSDVIHLLAAATWVGALACFVRD
GASRGNDAEWVTVLSRFARTGTLIVVLLAVTGIANGYLITGPSGLVPASTWSLLIAAK
ILLFIAMLGLAAHNRWHLVPALDTGQPGARARLSRSLVVETACALGVVALVAIAGMLN
PS"
misc_feature <421659..422075
/locus_tag="PP1Y_Mpl4190"
/note="Copper resistance protein D; Region: CopD; cl00563"
/db_xref="CDD:207110"
gene 422381..423226
/locus_tag="PP1Y_Mpl4201"
/db_xref="GeneID:10718258"
CDS 422381..423226
/locus_tag="PP1Y_Mpl4201"
/EC_number="2.3.1.-"
/inference="protein motif:COG:COG0454"
/inference="similar to AA sequence:UniProt:A3K8L9"
/note="KEGG: rhi:NGR_b06280"
/codon_start=1
/transl_table=11
/product="acetyltransferase, GNAT family"
/protein_id="YP_004538325.1"
/db_xref="GI:334145115"
/db_xref="GeneID:10718258"
/translation="MTDAVSEPVALTVEDLPQAVGLSTALSWPHRLEDWRFGYDLGHG
LALRQGDRLVGTAMAWNYGPDFATVGSIIVDSQFKGQRLGSRIFDALMDTLGERSVIL
AATLDGLELYRRRGFVGFDQICQYQGLAANLADEAASTAVEKAVGTDLPIVLELDAAA
TGMARRELIARLVEAGDLRVLRGQGDRPRGYAITRDFGRGQVIGPVIAECEEDARTLI
ADALSRLQGRFVRIDTSIGLGLGPWLETQGLAHVDTVEAMVRGNRPQPKGPARVYALS
SQSLG"
misc_feature 422513..422734
/locus_tag="PP1Y_Mpl4201"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_7; pfam13508"
/db_xref="CDD:205686"
gene 423318..424598
/locus_tag="PP1Y_Mpl4211"
/db_xref="GeneID:10718259"
CDS 423318..424598
/locus_tag="PP1Y_Mpl4211"
/inference="protein motif:COG:COG0665"
/inference="similar to AA sequence:UniProt:A0KDZ1"
/note="KEGG: bpy:Bphyt_5908"
/codon_start=1
/transl_table=11
/product="FAD dependent oxidoreductase"
/protein_id="YP_004538326.1"
/db_xref="GI:334145116"
/db_xref="GeneID:10718259"
/translation="MKLTSYWLDTVAPFSGRSRQPVGGKADVVIVGAGLTGTSAALSL
ARKGADVVVLEADVVGSQASGRSGGMCNNGFAQDYRMMAEAIGIEKANTLYRAFDAGV
DTVERLVQEEDIDCSFARNGKLKLAARPEHYDKLARTQELLARQVDSDTYMVSREGLA
GEIGSDRYYGGMVFAKSAGLHVGRFVRGLGEAAARRGAQIHEQTPVTGIRRTASGSFE
VTTPRGKIEAGQVLLASGISGVGPLGWFRRRIIPVGSFIIATEPLSDERLNQIMPRRR
MATDTKNIVNYFRHLPDNRLLFGGRARFAVSDPESDVKSGKLLQAALLDVFPQLADVR
IDYCWGGMVDMTRDRLPRAGQRQDGLYYSMGYSGHGTQMATYMGTVMAEVMDGNVDLN
PWRDFDWPAIPGHFGKPWFLPIVGTYYHLKDRFT"
misc_feature 423390..424505
/locus_tag="PP1Y_Mpl4211"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 423396..424328
/locus_tag="PP1Y_Mpl4211"
/note="FAD dependent oxidoreductase; Region: DAO;
pfam01266"
/db_xref="CDD:201696"
gene 424595..426055
/locus_tag="PP1Y_Mpl4225"
/db_xref="GeneID:10718260"
CDS 424595..426055
/locus_tag="PP1Y_Mpl4225"
/EC_number="1.2.1.3"
/inference="protein motif:COG:COG1012"
/inference="similar to AA sequence:UniProt:A4JSQ3"
/note="assigned by KAAS to KEGG Orthology:K00128 aldehyde
dehydrogenase (NAD+)"
/codon_start=1
/transl_table=11
/product="aldehyde dehydrogenase"
/protein_id="YP_004538327.1"
/db_xref="GI:334145117"
/db_xref="GeneID:10718260"
/translation="MTDPISHLAASGRFDRILVGGHWIEPLSSRTAPVIDPASEETIA
HVVLAGPDDVDAAVAAARGAFPGWAATPVAQRARLLSRVHELILERAELLAQAISQEM
GSAITFARAAHVPFAAEHVRVAAENLADYPFLHMRGTTAIAREPIGVCGLITPWNWPL
YQITAKVAPALAAGCTVILKPSELAPLSALLFAEIICDAGIPAGVFNLVSGSGPDVGE
ALSAHADIDMISITGSTRAGVLVSKSAAETVKRVALELGGKSPNVVLPDADLARAVPP
GIASCYRNVGQSCSAPTRMIVPREKLAEVERIAAETAAQFVVGDPRDERTTHGPIANR
AQFERVQYMIGVGISEGAKLVCGGSGKPEGLERGFYARPTIFSEVTSDMAIAQDEVFG
PVLVIIPYDSVEEAVAIANDTIYGLGAHVQGTDMDQVRAVARRIRSGQVHLNYPAWDP
QAPFGGYKRSGNGREYGIEGMEEFLEIKAMVGYEPS"
misc_feature 424643..426040
/locus_tag="PP1Y_Mpl4225"
/note="Rhodococcus ruber 6-oxolauric acid
dehydrogenase-like; Region: ALDH_CddD_SSP0762; cd07138"
/db_xref="CDD:143456"
misc_feature 424661..426031
/locus_tag="PP1Y_Mpl4225"
/note="Aldehyde dehydrogenase family; Region: Aldedh;
pfam00171"
/db_xref="CDD:201055"
misc_feature order(425051..425065,425132..425134,425243..425245,
425285..425296,425303..425305,425312..425314,
425357..425365,425459..425461,425759..425761,
425765..425767,425954..425956)
/locus_tag="PP1Y_Mpl4225"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:143456"
misc_feature order(425063..425065,425357..425359,425450..425452,
425459..425461)
/locus_tag="PP1Y_Mpl4225"
/note="catalytic residues [active]"
/db_xref="CDD:143456"
gene 426996..428411
/locus_tag="PP1Y_Mpl4242"
/db_xref="GeneID:10718261"
CDS 426996..428411
/locus_tag="PP1Y_Mpl4242"
/inference="protein motif:COG:COG5001"
/inference="similar to AA sequence:UniProt:B8H3B9"
/note="KEGG: ccr:CC_3094"
/codon_start=1
/transl_table=11
/product="sensory box/GGDEF family protein"
/protein_id="YP_004538328.1"
/db_xref="GI:334145118"
/db_xref="GeneID:10718261"
/translation="MHRALQRLADGDLDIEIGVFRLQELQALSGPLETFRRNAKAVKN
LAFTDAATGMPNRRAFQETAERLLSASKEGRFAFMLIDIDRFKHINDDYGHAAGDELV
RIIGARMKAFLGKASVVARVGGDEFAVFLPLTAQTSGIAVGSALVEAMREPFSLGEYS
VASTVSLGVTEAQLPSGSDVDAILRNADLALYASKKNGRNCATAFAAQMAEERLIDRA
LEKDLEAAFDGGQLRMVYQPIHSIDEACREVEALVRWKHPELGEVPPSTFIPAAERSG
LMVRLGEWIIRRALQDFAKWPDIHMSLNLSPLQLQHDGFSTFLLDCCRQNGIAPQRLF
LEVTESLSIERNTRALLTLNLLRNLGFRIALDDFGTGYSSLSMVKSFKFDRMKLDRTL
VMDLGQDPASLAVLEAAVTMARHVGAEVVAEGISEDRLVAPTRSAGCTHLQGYFYSRP
IEASHVHDYIAKVQGKRARAA"
misc_feature 427134..427598
/locus_tag="PP1Y_Mpl4242"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature order(427239..427241,427368..427370)
/locus_tag="PP1Y_Mpl4242"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(427254..427256,427263..427268,427278..427280,
427290..427292,427356..427358,427362..427373)
/locus_tag="PP1Y_Mpl4242"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(427344..427346,427428..427430)
/locus_tag="PP1Y_Mpl4242"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature 427656..428360
/locus_tag="PP1Y_Mpl4242"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene complement(428797..430119)
/locus_tag="PP1Y_Mpl4262"
/db_xref="GeneID:10718262"
CDS complement(428797..430119)
/locus_tag="PP1Y_Mpl4262"
/inference="protein motif:COG:COG0665"
/inference="similar to AA sequence:UniProt:A4XF43"
/note="KEGG: nar:Saro_3695"
/codon_start=1
/transl_table=11
/product="FAD dependent oxidoreductase"
/protein_id="YP_004538329.1"
/db_xref="GI:334145119"
/db_xref="GeneID:10718262"
/translation="MSPVVERIHSDEKLPAAADVVIVGAGIVGSATAYYLARRGLSVA
LLEKGHVGCEQSSRNWGWCRQQNRDAREMPLSQLSMRLWDELAGEIGKDLGFRRCGLV
YATDDAQMLAGWESWRPVAKDFGVNTRMLSAAEAADRMPTTRRNWIGGLHSVDDGKAE
PALAAPVLAEGARALGATIHQQCAARGLDITNGQVVGVHTEKGTIRTSAVLCSAGAWA
SRFLRTHGVSFPQASVRQTALRTKPTANVGEVLYSPDFAMTRRLDGSYTLAISGRAVL
ELTPQGIRYAREFMPQFLQRLKAVQVGLGKSFLTGPDSVSALLKNDDKVFEKTRVLDP
EPLGRQVRQIMHNVRTTFPELADIEIDSAWGAFVDCTPDAVPVISQVGKVDGLFLAAG
CSGHGFGVGPGIGYLAAQLIVNDTPSVDTTPFRLSRLVDGSKVQVGAL"
misc_feature complement(428818..430032)
/locus_tag="PP1Y_Mpl4262"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(428821..430032)
/locus_tag="PP1Y_Mpl4262"
/note="Glycine/D-amino acid oxidases (deaminating) [Amino
acid transport and metabolism]; Region: DadA; COG0665"
/db_xref="CDD:31009"
gene 430513..431694
/locus_tag="PP1Y_Mpl4283"
/db_xref="GeneID:10718263"
CDS 430513..431694
/locus_tag="PP1Y_Mpl4283"
/inference="protein motif:COG:COG3503"
/inference="similar to AA sequence:UniProt:B3D4U6"
/note="KEGG: nar:Saro_2951"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538330.1"
/db_xref="GI:334145120"
/db_xref="GeneID:10718263"
/translation="MGQAQFKASPLTRPAAAVRRRLQSIDALRGLVMVIMLLDHVRET
WFLHMQVSDPMDAASVAPSLFFTRLVSNLCAPVFVALTGLGAWLYTQSHSKADASTFL
LKRGLFLMFLEVTLITMAWTYKFPPTFWLQVIWAIGLAMVSLAALLHLPRKVLFAIGL
AIVCGHNLLDPIHLEPGHPFYVPWAMLHQRDMIDLPFGLMAKTTYPVLPWIGVISLGY
AMGPWFAKGTDANTRQRRLLLLGCGMLLAFVVLRLLDVYGDKPWTAGETPLRTFMAFI
ALTKYPPSLLFLLPTLGIGALLLSQFEKAQGQGWMNALSVFGAAPMFFYVLHLYVLRA
LYMTALYIWGPNHGEFFGVDNIAWVWVWYVGLLPALYIPTVWFSRLKSRRRDIAWLKY
L"
misc_feature 430561..431574
/locus_tag="PP1Y_Mpl4283"
/note="Predicted membrane protein [Function unknown];
Region: COG3503"
/db_xref="CDD:33306"
gene 431694..432530
/locus_tag="PP1Y_Mpl4296"
/db_xref="GeneID:10718265"
CDS 431694..432530
/locus_tag="PP1Y_Mpl4296"
/inference="protein motif:COG:COG3450"
/inference="similar to AA sequence:UniProt:A1TP73"
/note="KEGG: aav:Aave_2183"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538331.1"
/db_xref="GI:334145121"
/db_xref="GeneID:10718265"
/translation="MPLQSPALISDFPEGADETETIGLCIPTRSHFLIRRFFVSTLTG
CPTFIDLRALATDLPAGDMPGTDAFTSGFHPVNLSSGPCEIGLLALPAGQGETCEDRG
DTWIFVLEGKVTVTDASGALDLAAGESFGVARDTPFAWSSDGGARLVIMRYLEGPSGN
PGITRIDNDAELSPSNPPAAELLLGETPSCRANTMFASADEAFKCGIWDSTPYQRTPI
FFHHCELMHLLEGSVTFVDAEGREATFSKGDTFVIEQGAECSWDSQVDVTKIFALWRK
PA"
misc_feature <431994..432146
/locus_tag="PP1Y_Mpl4296"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:212615"
misc_feature 432285..432506
/locus_tag="PP1Y_Mpl4296"
/note="Protein of unknown function (DUF861); Region:
Cupin_3; pfam05899"
/db_xref="CDD:147835"
gene complement(432590..433564)
/locus_tag="PP1Y_Mpl4302"
/db_xref="GeneID:10718266"
CDS complement(432590..433564)
/locus_tag="PP1Y_Mpl4302"
/inference="protein motif:COG:COG0179"
/inference="similar to AA sequence:UniProt:A4JEE1"
/note="KEGG: nar:Saro_3422"
/codon_start=1
/transl_table=11
/product="fumarylacetoacetate (FAA) hydrolase"
/protein_id="YP_004538332.1"
/db_xref="GI:334145122"
/db_xref="GeneID:10718266"
/translation="MRLATIAGATPDGTLVVVSQDGRRMLAAGPQMPNLLGAMERWDA
LQPHLAALARRLEAGEGEPLDPGALRAPLPRTWQWLDGSAFGTHGDLMQIAFKLPPIE
TDRPLMYQGISDRFYGPGDPVPFPDPADGIDFEGEFGVIVDAVPMGTTAEEAMKHIRL
VVQINDWSLRTIAPVEMKTGFGWVQAKPACSMAPFAVTPEALGDAWQDGRVCLDLVIE
WNGKAFGHANGAAMDFGFHELVAHAARTRDLVAGTVIGSGTVSNPNYAEVGSSCISEV
RAIEMIAGGKPSTAFMGYGDTIRMEARAKDGLAPFGAIDQRVAKPATR"
misc_feature complement(432758..>433351)
/locus_tag="PP1Y_Mpl4302"
/note="2-keto-4-pentenoate
hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
(catechol pathway) [Secondary metabolites biosynthesis,
transport, and catabolism]; Region: MhpD; COG0179"
/db_xref="CDD:30528"
misc_feature complement(432608..433324)
/locus_tag="PP1Y_Mpl4302"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; pfam01557"
/db_xref="CDD:201859"
gene complement(433570..434349)
/locus_tag="PP1Y_Mpl4308"
/db_xref="GeneID:10718267"
CDS complement(433570..434349)
/locus_tag="PP1Y_Mpl4308"
/inference="protein motif:COG:COG1878"
/inference="similar to AA sequence:UniProt:A4JED9"
/note="KEGG: nar:Saro_0716"
/codon_start=1
/transl_table=11
/product="putative cyclase"
/protein_id="YP_004538333.1"
/db_xref="GI:334145123"
/db_xref="GeneID:10718267"
/translation="MARRFVDLSITLCNDVITDPPFLKPEITYQTHGETMGELGHFFP
GVTAEQTPDGAGFAAAEWVKLTTHSGTHLDAPWHFHPTQDGGKPALTIDEVPLEWCFQ
PGVKLDFRHFEDGYVVTAKDVEDELARIGHELKPLEIVVVNTAAGKALGDPDYVSRGC
GMGYEATMYLTERGVRVTGTDAWSWDAPFVHTARKVEETGDTSLIWEGHKAGRDIGYC
HIEKLHNLEVLPADGFTISCFPHKIKGASAGWIRAVAIFED"
misc_feature complement(433783..434337)
/locus_tag="PP1Y_Mpl4308"
/note="Putative cyclase; Region: Cyclase; pfam04199"
/db_xref="CDD:190907"
gene complement(434487..435644)
/locus_tag="PP1Y_Mpl4320"
/db_xref="GeneID:10718268"
CDS complement(434487..435644)
/locus_tag="PP1Y_Mpl4320"
/inference="protein motif:COG:COG0596"
/inference="similar to AA sequence:UniProt:B9JQ86"
/note="KEGG: nar:Saro_0714"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538334.1"
/db_xref="GI:334145124"
/db_xref="GeneID:10718268"
/translation="MALFEYFPNYIWNLSVAIAMESGGRIGEVIDMCKPIKDAADAGA
DAGTPAFMKQWVAMGDKLIELAAEDEARGRLFSASNKLERAALYMFTGERMQGHGHPG
RKETYAKARAAFDKSTQIGRINRERVEIPLEKGTMPALFTRAPGEGRKPVVVFCNGLD
SCKELLYWTQLPEQLARRGISTLCVDQPGSGETLRLQGLPVDPHSESWASKAVDWLEQ
QDNVDPRAIGMTGISLGGHFAPRAVAYEPRFASGAVWGANHNWREVQDKRMAREGENP
VPHYWAHVHWAFGAKDQEDFLAKSEAMNLNGHMDGIKVPFLVTHGANDRQISPQYADD
LYDQLVNSPRREKVIFTAREGGVEHVGADNMSYGRDLLSDWFAETLGGKTA"
misc_feature complement(434577..435191)
/locus_tag="PP1Y_Mpl4320"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_5;
pfam12695"
/db_xref="CDD:205024"
misc_feature complement(434622..>435014)
/locus_tag="PP1Y_Mpl4320"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene complement(435648..436559)
/locus_tag="PP1Y_Mpl4329"
/db_xref="GeneID:10718269"
CDS complement(435648..436559)
/locus_tag="PP1Y_Mpl4329"
/inference="protein motif:COG:COG0346"
/inference="similar to AA sequence:UniProt:Q2GAG3"
/note="KEGG: nar:Saro_0713"
/codon_start=1
/transl_table=11
/product="glyoxalase/bleomycin resistance
protein/dioxygenase"
/protein_id="YP_004538335.1"
/db_xref="GI:334145125"
/db_xref="GeneID:10718269"
/translation="MTRVTEIRFVGYGVEDFDAERKFYTDDWGLVEVPGSGDKADMAW
FKTQGHGEHHVVRLHKSDANHVEVIAFAADSRADVDALFGKIEAAGCKVIFAPRDLDA
PGGGYGFRFFSPDGLPFEISAGVETLEARELERWEGVPLKISHIVLHSPDHQAMVKFF
TDVLGFRISDWLGDFMCFLRCNEAHHRVAILPGPPCLNHVAYDMPSIDDMFRGAHRLK
QHGTDIRWGPGRHTAGNNTFSYFVTPGGFAVEYTSELEVVDFETHEYKVHKPAPMVMD
QWGIGTGGPQTMPHPAPDARLFQASEF"
misc_feature complement(435807..436550)
/locus_tag="PP1Y_Mpl4329"
/note="2,3-dihydroxybiphenyl 1,2-dioxygenase; Region:
23dbph12diox; TIGR03213"
/db_xref="CDD:132257"
misc_feature complement(436179..436550)
/locus_tag="PP1Y_Mpl4329"
/note="This domain superfamily is found in a variety of
structurally related metalloproteins, including the type I
extradiol dioxygenases, glyoxalase I and a group of
antibiotic resistance proteins; Region: Glo_EDI_BRP_like;
cl14632"
/db_xref="CDD:211465"
misc_feature complement(order(436200..436202,436206..436208,
436230..436232,436356..436358,436383..436385,
436389..436391,436434..436436,436521..436523,
436533..436535))
/locus_tag="PP1Y_Mpl4329"
/note="active site"
/db_xref="CDD:211348"
misc_feature complement(order(436200..436202,436356..436358,
436533..436535))
/locus_tag="PP1Y_Mpl4329"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:211348"
misc_feature complement(435720..436145)
/locus_tag="PP1Y_Mpl4329"
/note="C-terminal, catalytic, domain of BphC5
(2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium
Rhodococcus rhodochrous K37 and similar proteins; Region:
BphC5-RK37_C_like; cd07239"
/db_xref="CDD:176663"
misc_feature complement(order(435810..435812,435840..435842,
435858..435863,435867..435869,435957..435959,
435963..435965,436002..436004,436026..436028,
436119..436121,436125..436127))
/locus_tag="PP1Y_Mpl4329"
/note="putative active site [active]"
/db_xref="CDD:176663"
misc_feature complement(order(435810..435812,435840..435842,
435963..435965,436125..436127))
/locus_tag="PP1Y_Mpl4329"
/note="Mn binding site [ion binding]; other site"
/db_xref="CDD:176663"
misc_feature complement(order(435720..435731,435741..435746,
435750..435755,435870..435872,435903..435905,
435915..435917,435924..435929,435936..435938,
435984..435986,436035..436037))
/locus_tag="PP1Y_Mpl4329"
/note="putative oligomer interface [polypeptide binding];
other site"
/db_xref="CDD:176663"
gene complement(436586..437701)
/locus_tag="PP1Y_Mpl4335"
/db_xref="GeneID:10718270"
CDS complement(436586..437701)
/locus_tag="PP1Y_Mpl4335"
/inference="protein motif:COG:COG0654"
/inference="similar to AA sequence:UniProt:Q2GAG4"
/note="KEGG: nar:Saro_0712"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538336.1"
/db_xref="GI:334145126"
/db_xref="GeneID:10718270"
/translation="MKDLNTLIIGGGIGGLSAAIALRRAGHGVTVIEKDPEWSVYGVG
IIQQSNVIRAMDQLGVLDAFLGAACGFDAVEIYLPDGTRVARVPSPALVEGKPANVGI
GRRALQKVLGDSAMQLGAEIRLGVAAERFDDDGEGVNVRFSDGREERFDVVVGADGVY
SQTREAILPDAEKPQFTGQAVWRYNFPRPADLDALHVYNGPIGSGLVPMSEELMYMYV
TTPEPDNPWYPTEGIAAVMRSKLARAAPQIRALAEQITSDEGVVYRPLEGMMLYGSWS
KGRIALLGDAVHATTPHLGQGAGMAIEDALVLAEELTRADTPEAAFEAYRDRRFERCR
YIVEKSLEICHGQIGKGPPVDNHKATAEMFAVVSQPI"
misc_feature complement(436589..437635)
/locus_tag="PP1Y_Mpl4335"
/note="hypothetical protein; Provisional; Region:
PRK06847"
/db_xref="CDD:180727"
misc_feature complement(436685..437635)
/locus_tag="PP1Y_Mpl4335"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene 438368..439372
/locus_tag="PP1Y_Mpl4354"
/db_xref="GeneID:10718271"
CDS 438368..439372
/locus_tag="PP1Y_Mpl4354"
/inference="similar to AA sequence:UniProt:Q2GAG6"
/note="KEGG: nar:Saro_0710"
/codon_start=1
/transl_table=11
/product="xylose isomerase-like TIM barrel
domain-containing protein"
/protein_id="YP_004538337.1"
/db_xref="GI:334145127"
/db_xref="GeneID:10718271"
/translation="MSKIQRGVSLYSFQEEMFLGQMSVEDCVAYAASIGAKGIEILPE
QNMPTFPNISDAEVDRWKGMMERHGTHFTCYDMFLDTKLRKGELMSDEEQVASIERDL
RLCHRLGIKNMRILIFVRPDILEKCVPLAEELDIHMGVEVHAPWHLEHAWILRTIDVA
DRLKTRHLGILPDMGIFMKHYPPAFRARFERQGARPEVTQFIVDQHEQKIMCEYTIYE
VAVKMGGNKAEIAMAETLRHAPYANPKRLKDYAPYFRHIQAKFYEMNEDCTDPSLAYE
DVIPELVKCGWEGTLSSEYEGNRWIQDVMEVDSREQVRRQHVMFDRLIAKAEAELENA
"
misc_feature 438449..>438886
/locus_tag="PP1Y_Mpl4354"
/note="Xylose isomerase-like TIM barrel; Region:
AP_endonuc_2; pfam01261"
/db_xref="CDD:201692"
gene 439787..440173
/locus_tag="PP1Y_Mpl4365"
/db_xref="GeneID:10718272"
CDS 439787..440173
/locus_tag="PP1Y_Mpl4365"
/inference="similar to AA sequence:UniProt:Q2GAG7"
/note="KEGG: nar:Saro_0709"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538338.1"
/db_xref="GI:334145128"
/db_xref="GeneID:10718272"
/translation="MFDKYLIDETTLHNTGPADAPTGFAFQAKLGYYRGIGLSMIEKL
DVSIDGETIARDAVRFDEGKGPISLEEMETAYDRRWPFGAPATISVEYPGGFPKGEHE
LSLVEQLRVSYLPFPSVNTDVKRVTF"
gene complement(440316..441668)
/locus_tag="PP1Y_Mpl4373"
/db_xref="GeneID:10718273"
CDS complement(440316..441668)
/locus_tag="PP1Y_Mpl4373"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:A3TIW9"
/note="KEGG: sma:SAV_2275"
/codon_start=1
/transl_table=11
/product="transmembrane efflux protein"
/protein_id="YP_004538339.1"
/db_xref="GI:334145129"
/db_xref="GeneID:10718273"
/translation="MVALVLEIVDVTIVNTALPVIEKDFGSAAAEAQWVSAGYSLAFA
LLLMLGGRLGDALGYRGLFITGVAGFTGASILCGLSGSPEQLIAARVLQGCAGAMMAP
QVMALIQVLFEPLERVAKLAWVGVIGGMSAIAGPILGGLLIHANLFGLGWRSVFLINA
PVGVVALIVAWRLLPKARSEHARGIDVWGTMLFAGAMAGLLFPLVRGSDLGWQPWHFA
LLLASPILLMIVWRRTRQRTERGAASMFHPELFSQRQFPMGLLIALLFGSSTSGFLFV
FAFGVQKLLGYSPLQTGLLHIPFSVGVMIGIAFLGRKLIASHGKWVLVGGVTCMALFS
AGTLGWIVTGGDGWWVLGCLALAGAGMGMTNGPLTPVILARVDRKHAGAASGLIKTVQ
ELGLALGVAIVGTAFFASAGPGETGKLLPAILVIEILLLGCFVLAIRLPGPLFPEHDA
"
misc_feature complement(440472..441668)
/locus_tag="PP1Y_Mpl4373"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature complement(<440973..441668)
/locus_tag="PP1Y_Mpl4373"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(440973..440975,440985..440987,
440994..440996,441006..441008,441018..441020,
441060..441062,441069..441074,441081..441086,
441093..441095,441273..441275,441291..441296,
441303..441308,441342..441344,441351..441356,
441363..441368,441375..441380,441516..441521,
441525..441530,441540..441542,441549..441554,
441561..441563,441612..441617,441621..441629,
441636..441638))
/locus_tag="PP1Y_Mpl4373"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(441767..443458)
/locus_tag="PP1Y_Mpl4386"
/db_xref="GeneID:10718274"
CDS complement(441767..443458)
/locus_tag="PP1Y_Mpl4386"
/inference="protein motif:COG:COG2303"
/inference="similar to AA sequence:UniProt:B0T5J8"
/note="KEGG: nar:Saro_1208"
/codon_start=1
/transl_table=11
/product="glucose-methanol-choline oxidoreductase"
/protein_id="YP_004538340.1"
/db_xref="GI:334145130"
/db_xref="GeneID:10718274"
/translation="MQNHEFDAIVVGSGITGGWAAKQLTEAGLKVLMLERGRKIEHQV
DYENETKAPWDMPFRGVGDTELYKREYPVQMLNRHFTEFTQDHFVNDADQPYQKAKGS
EFDWFRSYQLGGRSLTWGRQCYRWSDYDFGANKRDGFGTDWPIRYDDLAAWYDLVEDF
VGVSGAHEGLPQLPDGKFLPAMELNCVEAAMRERILAKYPDRLITIGRTANLTEARPE
QGRAHCQYRSICARGCSYGAYFSTQSATLPAAKKTGLLTVVTDAQVTKLDHDPQTRRV
SAVHWVDTKTGEAKRAGSRIVFLNAGAFNSVHLLLNSASEAMPNGLANSSGVLGTHIM
DHANTMAAMAVVPGFEDRTSFGNRPTGIVIPRFRNLDKLDGDGFTRGYSFQGGALQGT
WTRGKRMPGIGEGFKEEIHKIGPWTMVLVVFADSMPRASNRLTLSKQLDPRGVPQLEI
AFAHGKEELAALADAKKEAAAMLNSAGAHVVMGFDQPGHGGTAIHEMGGARMGWDPET
SVLNRWSQSHDVANLFVTDGAQMSSSACQNPSLTYMALTARACDAAVKMLKEGAI"
misc_feature complement(441791..443458)
/locus_tag="PP1Y_Mpl4386"
/note="Choline dehydrogenase and related flavoproteins
[Amino acid transport and metabolism]; Region: BetA;
COG2303"
/db_xref="CDD:32458"
misc_feature complement(<443351..443458)
/locus_tag="PP1Y_Mpl4386"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(441809..>441994)
/locus_tag="PP1Y_Mpl4386"
/note="GMC oxidoreductase; Region: GMC_oxred_C; pfam05199"
/db_xref="CDD:203202"
gene complement(443464..444096)
/locus_tag="PP1Y_Mpl4400"
/db_xref="GeneID:10718275"
CDS complement(443464..444096)
/locus_tag="PP1Y_Mpl4400"
/inference="similar to AA sequence:UniProt:Q2G921"
/note="KEGG: nar:Saro_1207"
/codon_start=1
/transl_table=11
/product="twin-arginine translocation pathway signal"
/protein_id="YP_004538341.1"
/db_xref="GI:334145131"
/db_xref="GeneID:10718275"
/translation="MSTPASGWTRREFAGGAALLALALGIPAAAVKLTDLDAADVPSD
RQRKLIAEVSELVIPKTDTPGAAEVGVGDFVILALAHGLSGTREPVATGVITPALAPF
RRRDGSLNHLDWLERRLDHAAGGDFLRRDKDEQSRLLAAIDGEAMAHGAAYSPWVAIK
GLILTGYYTSEVGGSQELRYELVPGKWEPDIPIQPGDRAFSSDWTAVDFG"
misc_feature complement(443542..443970)
/locus_tag="PP1Y_Mpl4400"
/note="Gluconate 2-dehydrogenase subunit 3; Region:
Gluconate_2-dh3; pfam13618"
/db_xref="CDD:205796"
gene complement(444093..445151)
/locus_tag="PP1Y_Mpl4407"
/db_xref="GeneID:10718276"
CDS complement(444093..445151)
/locus_tag="PP1Y_Mpl4407"
/inference="protein motif:COG:COG1082"
/inference="similar to AA sequence:UniProt:B2IKB4"
/note="KEGG: nar:Saro_0453"
/codon_start=1
/transl_table=11
/product="xylose isomerase-like TIM barrel
domain-containing protein"
/protein_id="YP_004538342.1"
/db_xref="GI:334145132"
/db_xref="GeneID:10718276"
/translation="MKTIKGPAIFLAQFAGDEAPFNSLDAIGDWVASLGYKGVQIPSW
DARLFDLAKAAESQDYCDEVKGRLGAKGLEITELSTHLQGQLVAVHPAYDVQFDGFAA
EHVRGDPKARQEWAVDQLKLAAKASKRLGLNAHATFSGALAWPYVYPWPQRPAGLVED
AFEELARRWKPILDTFDENGVDLAYEIHPGEDLHDGATFEMFLERVGDHPRANILYDP
SHFVLQQLDYLAFLDIYHERVKCFHVKDAEFRPSGRMGVYGGYQSWVDRPGRFRSLGD
GQVDFAQIFSKMAQYDFAGWAVLEWECALKHPEAGAAEGAPFIADHIIRVTDKAFDDF
ADSGSDREVNARIMGIGA"
misc_feature complement(444177..445133)
/locus_tag="PP1Y_Mpl4407"
/note="Sugar phosphate isomerases/epimerases [Carbohydrate
transport and metabolism]; Region: IolE; COG1082"
/db_xref="CDD:31279"
misc_feature complement(444150..444314)
/locus_tag="PP1Y_Mpl4407"
/note="AP endonuclease family 2 C terminus; Region:
AP_endonuc_2_N; pfam07582"
/db_xref="CDD:191792"
gene complement(445173..446288)
/locus_tag="PP1Y_Mpl4418"
/db_xref="GeneID:10718277"
CDS complement(445173..446288)
/locus_tag="PP1Y_Mpl4418"
/inference="protein motif:COG:COG0673"
/inference="similar to AA sequence:UniProt:B0T5K5"
/note="KEGG: nar:Saro_0452"
/codon_start=1
/transl_table=11
/product="oxidoreductase-like"
/protein_id="YP_004538343.1"
/db_xref="GI:334145133"
/db_xref="GeneID:10718277"
/translation="MSRLRMGMIGGGPGAFIGPVHRIAAELDREIELVAGAFSSDAER
SRKAGDTYRIDPARAYPDVATMLREEAAREDGIDFVAVTTPNHHHLPAVRAALQAGLP
VICDKPATATLDEAREMAGLVASAGLPFALTYTYSGYPLVREARARIAAGDLGQIRKV
VVEYPQGWLAQQAEGKQAEWRVDPGRAGIGGCIADIGVHAFQLAEFVTGLKVTRILAD
LGAVVPGRVLDDDCQILLRFENGARGALLASQISVGERNGLRIRVYGEKGGIDWRQES
PNAFTLYHLDGRTELVQAGDPGLGEAAVASSRTPGGHPEGYLEAFANLYRDFAKQLRG
EPGSLVPGMADGLRGMQLIDLAVRASREERGWTDFPA"
misc_feature complement(445197..446231)
/locus_tag="PP1Y_Mpl4418"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature complement(445887..>446189)
/locus_tag="PP1Y_Mpl4418"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature complement(445500..445853)
/locus_tag="PP1Y_Mpl4418"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; cl11611"
/db_xref="CDD:209369"
gene 446505..447689
/locus_tag="PP1Y_Mpl4431"
/db_xref="GeneID:10718279"
CDS 446505..447689
/locus_tag="PP1Y_Mpl4431"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:Q2GAG5"
/note="KEGG: nar:Saro_0711"
/codon_start=1
/transl_table=11
/product="major facilitator transporter"
/protein_id="YP_004538344.1"
/db_xref="GI:334145134"
/db_xref="GeneID:10718279"
/translation="MKPQGITLVAAGFLPIFAIVSMFPIVAAMIQHFRTDPDAATKVP
LMVTAPGLTIAILAPFAGFFVDRFGRRRLLLLCTFFYGVFGTAPFFLDDLDHIFASRL
ALGVCEAGILTIVNTLIADYWDEQGRHNWLFLQGLAGPFLASGVILMSGLVASVRWNG
GFLVYLVAFPIYFAMLACLYEPRRAGQDAGETARPLAGEPRRPFPLGHALAVAAMTFF
SAALYYVFIVNGSIAFGEVGVNDPAAVSKITFLPSLFVMLGAVIFRVLASRANAVQLG
TFLFILGSGLTIIGLARTPTEMVVGLAIQQTGAGMTIPTLIAWAQTRFPFEHRGTGMG
IWTGAFFFGQFASPWFVHKFNLAAGTMQGAFLLAGGLALAVMVGILALLVTGLARRPE
PA"
misc_feature 446520..447557
/locus_tag="PP1Y_Mpl4431"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 446523..447548
/locus_tag="PP1Y_Mpl4431"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature order(446559..446561,446568..446576,446580..446585,
446643..446645,446652..446657,446664..446666,
446676..446681,446685..446690,446826..446831,
446838..446843,446850..446855,446862..446864,
446898..446903,446910..446915,446928..446930,
447162..447164,447171..447176,447183..447188,
447195..447197,447237..447239,447249..447251,
447261..447263,447270..447272,447282..447284,
447420..447422,447429..447434,447441..447443,
447453..447458,447465..447467,447498..447503,
447510..447515,447522..447527,447534..447536)
/locus_tag="PP1Y_Mpl4431"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(448700..449704)
/locus_tag="PP1Y_Mpl4444"
/db_xref="GeneID:10718280"
CDS complement(448700..449704)
/locus_tag="PP1Y_Mpl4444"
/inference="protein motif:COG:COG3667"
/inference="similar to AA sequence:UniProt:Q2G458"
/note="KEGG: nar:Saro_2930"
/codon_start=1
/transl_table=11
/product="copper resistance B"
/protein_id="YP_004538345.1"
/db_xref="GI:334145135"
/db_xref="GeneID:10718280"
/translation="MLVPDVAASQEQDAPMDHSQMDHGSMDHSMHGSMDDQNGMDMPM
DDSEAMPAGDHTMHDGQDMPMDMSSGEDHSAHAGHVMSAPQVADQPGKAPPPAVPTDH
SADRFFPQDRMQSARDALLKHSAFSTLALQVDRLEYRMKDGKDGYGWEGEAWYGGDID
RFVVASEGEGTFGEAAERIEVAAYWRHALDPWFNLQVGARQDFRPDTQRTYALLGIQG
LAPYWFEVEGQLLVSNKGDVHARGKASYDQRLTQVLVLEPEAEFDVAFQDVPEIGVGA
GFERVEVGARLRYDANRSLAPYIGVNWERKLGKTARLSRAAGEGASDVSAVVGIRAMF
"
misc_feature complement(448703..449317)
/locus_tag="PP1Y_Mpl4444"
/note="Copper resistance protein B precursor (CopB);
Region: CopB; pfam05275"
/db_xref="CDD:191247"
gene complement(449758..451455)
/locus_tag="PP1Y_Mpl4453"
/db_xref="GeneID:10718281"
CDS complement(449758..451455)
/locus_tag="PP1Y_Mpl4453"
/EC_number="1.10.3.3"
/inference="protein motif:COG:COG2132"
/inference="similar to AA sequence:UniProt:A5V8G4"
/note="assigned by KAAS to KEGG Orthology:K00423
L-ascorbate oxidase"
/codon_start=1
/transl_table=11
/product="L-ascorbate oxidase"
/protein_id="YP_004538346.1"
/db_xref="GI:334145136"
/db_xref="GeneID:10718281"
/translation="MLAGGLGLSAVTPAWARSGTPGTAGFGTLSGDSITLQIGESHFA
TGGRSAHAITVNGTLPAPLLRLREGQTVRLAVTNTLREQSSIHWHGLLLPFQMDGVPG
VSFPGIDPGETFVYEFPIVHSGTFWYHSHSGMQEAVGLYGPIVIDPAGPDPIGYDREH
VLVLSDWSPMHPHEQLRRLKMMGGYFNRQKQTLAGLLAGKDQSLAERLEWAQMRMDAT
DISDVTGSTYSFLINGHGTPENWTGLFKPGEKVRLRVINASAMTNFNFRVPGLALKVV
AADGNHVQPFETDEVQIAIAETYDFIVEPGEAESYAIVAEAIDRSGLVRASLAQRPGL
VAPVPPLRERPLLTMRDMGMDMSGMDMGEGGVIDLSKPANESMDGHSMSMRDPSVAPG
VKMGPGVATLSPMPVDRLADRPTGLEDVDHRVLTYADLRALDPNPDPRTPSREIDVHL
TANMERYMWSMDGEALSEGPDPIPFRLNERVRVNLINDTMMPHPIHLHGHFFELVSGE
PGHRVRKHTVNVLPGGKASFDLTADGEGDWAFHCHMLLHMHSGMMRIVTVRDEGADA"
misc_feature complement(449779..451449)
/locus_tag="PP1Y_Mpl4453"
/note="copper-resistance protein, CopA family; Region:
copper_res_A; TIGR01480"
/db_xref="CDD:162383"
misc_feature complement(451012..451347)
/locus_tag="PP1Y_Mpl4453"
/note="Multicopper oxidase; Region: Cu-oxidase_3;
pfam07732"
/db_xref="CDD:203745"
misc_feature complement(450511..450984)
/locus_tag="PP1Y_Mpl4453"
/note="Multicopper oxidase; Region: Cu-oxidase; pfam00394"
/db_xref="CDD:201203"
misc_feature complement(449773..450141)
/locus_tag="PP1Y_Mpl4453"
/note="Multicopper oxidase; Region: Cu-oxidase_2;
pfam07731"
/db_xref="CDD:203744"
gene complement(451532..452089)
/locus_tag="PP1Y_Mpl4467"
/db_xref="GeneID:10718282"
CDS complement(451532..452089)
/locus_tag="PP1Y_Mpl4467"
/inference="protein motif:COG:COG1595"
/inference="similar to AA sequence:UniProt:Q2G460"
/note="assigned by KAAS to KEGG Orthology:K03088 RNA
polymerase sigma-70 factor, ECF subfamily"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-70 factor"
/protein_id="YP_004538347.1"
/db_xref="GI:334145137"
/db_xref="GeneID:10718282"
/translation="MAVGDGDDASAAVAALAGRQSGFDTLMKRHREAVFRFVRGLTGN
ESDALDITQECFVAAFLALGRYDRTRPFRAWILRIARNKCHDWARRRTVRRFFSFAVP
LDDASDIADPEENPEEALSSRRGVERIHEAIASLPASLKEPLLLCSLEDMTQDEAAEV
LGISRKAVETRIYRARQKLSHLLEG"
misc_feature complement(451541..452023)
/locus_tag="PP1Y_Mpl4467"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:211770"
misc_feature complement(451817..452014)
/locus_tag="PP1Y_Mpl4467"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature complement(451553..451711)
/locus_tag="PP1Y_Mpl4467"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(451562..451564,451568..451573,
451577..451585,451589..451594,451598..451600,
451628..451633,451649..451651,451679..451681))
/locus_tag="PP1Y_Mpl4467"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene complement(452126..452500)
/locus_tag="PP1Y_Mpl4474"
/db_xref="GeneID:10718283"
CDS complement(452126..452500)
/locus_tag="PP1Y_Mpl4474"
/inference="similar to AA sequence:UniProt:Q2G461"
/note="KEGG: nar:Saro_2927"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538348.1"
/db_xref="GI:334145138"
/db_xref="GeneID:10718283"
/translation="MIGQKLRAGDNHESRLHAVLHEELDLDKAQEAQIDRLESEFAER
RKLLDGRLRQANAQLAQAIEREHTYGPAVERAVDQSHMAMGELQKATLRHVFSMRAVL
RPDQARRFDSAVAHALTTPPEE"
gene complement(453075..454049)
/locus_tag="PP1Y_Mpl4489"
/db_xref="GeneID:10718284"
CDS complement(453075..454049)
/locus_tag="PP1Y_Mpl4489"
/inference="protein motif:COG:COG1234"
/inference="similar to AA sequence:UniProt:P28607"
/note="KEGG: pat:Patl_0876"
/codon_start=1
/transl_table=11
/product="beta-lactamase-like protein"
/protein_id="YP_004538349.1"
/db_xref="GI:334145139"
/db_xref="GeneID:10718284"
/translation="MKVSLRALAPLAFLALAHTGEAATVTPGATSFITLGTMGGPVPD
GQRSQPANAIVRGDRVYLVDAGDGATEQLARAGMNLPAVRAVFISHLHIDHVGGLAAV
IGLRLQTETGGVLQIYGPPGTREFVGGIVASLQPSAKAGYGLPGRVWAPPANTVNVTE
LRDGEMITVDDMTVKVVQNTHYDFAPGSSDERNYKSYSYRFDMPGKSILYTGDTGPSE
AVEKLAAGVDLLVSEMIDMDSTLARMAKVAPDMPASIKENMVRHLTTHHLTPQEVGRL
AARAHAKALVVTHFAGGLSGPEQVGRNVEAVKKEYAGPVTIANDLDRF"
misc_feature complement(453078..453947)
/locus_tag="PP1Y_Mpl4489"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; cl00446"
/db_xref="CDD:207049"
gene complement(454066..456375)
/locus_tag="PP1Y_Mpl4496"
/db_xref="GeneID:10718285"
CDS complement(454066..456375)
/locus_tag="PP1Y_Mpl4496"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:A5VH73"
/note="KEGG: swi:Swit_5026"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538350.1"
/db_xref="GI:334145140"
/db_xref="GeneID:10718285"
/translation="MLKITIGTLLAGVALAPHLVLAQSAEAQVAEQSAGNEGGLEEII
VTAQRREETLQKVAVAVSAVTGDQLVKSGITETSNLGKLVPALVVQPTGGTTSFFLRG
VGTNSQNSFSENAIAFNFNGVYVGRPTAPAGVFYDLERVEVVKGPQGTLYGRNATGGA
INVLPKKPQLGTLGFEGLVEYGNYDSKKGFAAVNLPFGETVALRVAGQIVDRDGYLSD
GYDDDKGEAARASLLIKPSDQWSITFVGDYYNQHGKGSGAVLLPNPDFAVPPVDDRIG
LSDPLAIAAINGFADTRFAPPFCVGGFIASGCIENAKGDGYLNNKFYGLSAQVEGDMG
FGKLTIIPAWRRSEADFRTYLPGFLGEIQDNADQMSLEARLTSSAQGRLRYVAGAFFY
NEEQETLNYFRQGRLSTTRFSPRLKTQSIAAFGQLTFDLSYAFRVVAGGRYTHEEKSQ
LTASVSGGLPGPIDPPLGAPFTGSLTFNKFTWKAGVEFDAGPASLLYANVATGFKSGG
FYVASPPNNVFAPETLTAYTIGSKNRFFGNKVQLNVEAFYWDYKDQQVTFVGGVKTGD
GLFAQGSLTTNAGQSRIYGAEVEMRFAPTRHDQFSANVQYLNGKYNSLQTANFSPTGA
PVSTGCTVTGTRLANPGVNGARFFDIDCSGKPTVNSPRWSANVGYEHTFDLGGDMELI
AGLRSNIESSRFLNANFRDVEKQGAFMMSDAYLTLEGPEGRWTVTAFINNIEDEEVLA
RAGSRPILDFPIGTLRPPRTYGARLGFKL"
misc_feature complement(454072..456210)
/locus_tag="PP1Y_Mpl4496"
/note="TonB-dependent siderophore receptor; Region:
TonB-siderophor; TIGR01783"
/db_xref="CDD:162535"
misc_feature complement(454072..456195)
/locus_tag="PP1Y_Mpl4496"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(455881..455907,455941..455964,
456001..456018,456043..456048,456067..456084,
456112..456141,456169..456195))
/locus_tag="PP1Y_Mpl4496"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(455242..455244,455323..455325))
/locus_tag="PP1Y_Mpl4496"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 456691..457596
/locus_tag="PP1Y_Mpl4525"
/db_xref="GeneID:10718286"
CDS 456691..457596
/locus_tag="PP1Y_Mpl4525"
/inference="protein motif:COG:COG0583"
/inference="similar to AA sequence:UniProt:Q2G901"
/note="KEGG: nar:Saro_1227"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_004538351.1"
/db_xref="GI:334145141"
/db_xref="GeneID:10718286"
/translation="MRFKGLDLNLLLVLETLLAERSVTAASRRLNLSQPATSAALAKL
REYFNDELLQQRGRTMFPTAHALSIRPLVREVLADAERLIATSASFDPATSDRKFVVM
GSDYIFTTLLASFIASLQAEAPNIRIQANPLEPNVIKQLERAEVDLLLTPRHFVTPEH
PAIAIFEEQHVIVGWNENPIFSKEVKLEDFLAAPQVCVEFGPNRTVPFAEEQMRALGL
QRRIEVIAPTFAAVPWILPNSSRVAVLQERLAQKFARHLPLAIAPLPFPMSTMEEMAQ
FHSTRDRDAGLQWLLSRLQEKAQES"
misc_feature 456748..457593
/locus_tag="PP1Y_Mpl4525"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature 456748..456888
/locus_tag="PP1Y_Mpl4525"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 456982..457578
/locus_tag="PP1Y_Mpl4525"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature order(457027..457032,457036..457041,457048..457050,
457060..457062,457066..457086,457357..457374,
457390..457395,457399..457404)
/locus_tag="PP1Y_Mpl4525"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene complement(457719..458456)
/locus_tag="PP1Y_Mpl4533"
/db_xref="GeneID:10718287"
CDS complement(457719..458456)
/locus_tag="PP1Y_Mpl4533"
/inference="protein motif:COG:COG2186"
/inference="similar to AA sequence:UniProt:A5V7I5"
/note="KEGG: nar:Saro_3676"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_004538352.1"
/db_xref="GI:334145142"
/db_xref="GeneID:10718287"
/translation="MKERLYQDLARELLVDLVEGKYRVGDRLPAERELSALHNVSRPT
VREAIIALEVQGLVEVRVGSGAYVVRLPGDEEKPGFNISAFELTEARLLVESECAALA
AAQITDEELAGLERLVKEIAQENLDPKGTERADRQFHVTLAAATRNAALIEIVERLWN
LRATSPEASLLHEKARSANIKPVVDEHTAVLDALRARDPRAARAAMRAHLTTVLDSLL
FATEERAVEEARRAVAAKRERYARATS"
misc_feature complement(458085..458456)
/locus_tag="PP1Y_Mpl4533"
/note="Predicted transcriptional regulators
[Transcription]; Region: COG1725"
/db_xref="CDD:31911"
misc_feature complement(458253..458444)
/locus_tag="PP1Y_Mpl4533"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature complement(order(458259..458270,458274..458279,
458307..458309,458316..458321,458325..458339,
458361..458366,458370..458372,458439..458441))
/locus_tag="PP1Y_Mpl4533"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(<457974..458201)
/locus_tag="PP1Y_Mpl4533"
/note="FCD domain; Region: FCD; pfam07729"
/db_xref="CDD:203742"
gene 458978..461197
/locus_tag="PP1Y_Mpl4544"
/db_xref="GeneID:10718288"
CDS 458978..461197
/locus_tag="PP1Y_Mpl4544"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:A4XF16"
/note="KEGG: nar:Saro_3668"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538353.1"
/db_xref="GI:334145143"
/db_xref="GeneID:10718288"
/translation="MAGTLAGLLVAAPAQAQDAGSPDAADAGQDAGVIIVTAQKRSQD
ILQVPAAVSAISEKTLDAAQVKDFTDITNVAPSVTVASAGNSASSTVSLRGIGTLSFS
TSVEPSVSIVVDDVALLQQGQAFGKLNDIARIEVLRGPQDSLFGKNASAGVINIVTKD
PTNNLSGFVEGLMTDDNEVRVNGNLSGPIGDSAGFRINAFYGDRKGYIRNLTNDTWLN
GEESYGVRGKVKYDSGILSVQLIGDYSNTKSTGNQPTYYYVAPGTLQNGRPINLGGVV
PGIANTEVTVNDDQLSNTEQWMASAKIGLDLGFASLTSVSSYQDWKLDTSSDFDFTPS
FVIRQGGPYHAKQFAQELRLTSADTGPFDYLVGLYYADGETDRQFARDTAAFLTFLRR
NWDSTASTRTLAAFAQLGYDLSDKTKLTVGGRINNEKVGVFYRDNIPATPIIYQGQAK
DTALTGKASLQHFITDEVMTYASIATGYKGQAYDISSGFNQSRIDNLVKPENSVAYEV
GVKGRFWDNRGSFGLTGFWTDYDDFQAQNVEFVGGAIQPVLRNVGKLRTKGIEFEGTL
RPVNGLSLFASAAYVDAKIRQFPNATCYPGQTAVQGCVGGSQNLAGANLANSPKFKYN
IGGNFETPLGSSPISIFTSANYVWQDDVNFALDGNPLTEQKAYGIANATIGLRETENR
NWEVSLFVNNLFDKSYAAVLTDYSDNGYTGTAIVQQVPRNYGRYVGLKLRFGFGGDR"
misc_feature 459119..461149
/locus_tag="PP1Y_Mpl4544"
/note="TonB-dependent siderophore receptor; Region:
TonB-siderophor; TIGR01783"
/db_xref="CDD:162535"
misc_feature 459131..461176
/locus_tag="PP1Y_Mpl4544"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(459131..459157,459185..459214,459248..459265,
459308..459331,459368..459391,459425..459451)
/locus_tag="PP1Y_Mpl4544"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(459953..459955,460034..460036)
/locus_tag="PP1Y_Mpl4544"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene complement(461580..463052)
/locus_tag="PP1Y_Mpl4572"
/db_xref="GeneID:10718289"
CDS complement(461580..463052)
/locus_tag="PP1Y_Mpl4572"
/inference="protein motif:COG:COG3119"
/inference="similar to AA sequence:UniProt:A9V5D4"
/note="KEGG: mbr:MONBRDRAFT_27473"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538354.1"
/db_xref="GI:334145144"
/db_xref="GeneID:10718289"
/translation="MGPTAGSRPNLILFMTDECRADALSSYGNPVCKTPNFDLLARQG
TRFADCHVQYPVCGASRCSLLTGLPVANTGHRSLYYFIRPDEPNMLRYLKESGYDTYL
IGKNDALAEASFPLSLTNWLDFPWRGGGGHTRFDLDAPNTMLVDAKPDPRQTNDYKLL
QSAIQILERRQQDRPFCIFLAIGSPHPPYFAPQGFADMYKPDDLPDLAPPGLSKKPIF
HEVVRKGYHLDEVGDAVFRQVRATYYGQVSYADWLLGQLMEALERTGRSRDTVLVASS
DHGDYAGDYGMVEKWPGGLESCLTRVPLVIRMPGGAEGHVVPEMTELYDIMPTFLDLG
AVRPKQAIFARSLLPQLGGAKGDPERAAYTESGYDTFEPQAFEPRMKGPPNIYTAKHE
IQNDFPQTVTRAAAITTPAYKLVSRPNGQSELYDRKKDPAELVNLIDDRRYARTREAL
THKLLDRYISTTGVPPVERDSREVPPDPPMPQFDNAASVE"
misc_feature complement(461703..463031)
/locus_tag="PP1Y_Mpl4572"
/note="Arylsulfatase A and related enzymes [Inorganic ion
transport and metabolism]; Region: AslA; COG3119"
/db_xref="CDD:32933"
misc_feature complement(461988..463028)
/locus_tag="PP1Y_Mpl4572"
/note="Sulfatase; Region: Sulfatase; pfam00884"
/db_xref="CDD:201490"
gene 463284..464885
/locus_tag="PP1Y_Mpl4586"
/db_xref="GeneID:10718290"
CDS 463284..464885
/locus_tag="PP1Y_Mpl4586"
/EC_number="3.1.1.1"
/inference="protein motif:COG:COG2272"
/inference="similar to AA sequence:UniProt:Q2G7Z9"
/note="assigned by KAAS to KEGG Orthology:K03927
carboxylesterase type B"
/codon_start=1
/transl_table=11
/product="carboxylesterase type B"
/protein_id="YP_004538355.1"
/db_xref="GI:334145145"
/db_xref="GeneID:10718290"
/translation="MRALHLIKIVAGLLLGPTAASAAATVDAPPSAAIVHTQGGTLSG
KVLPSGIRAYLGIPYAAPPVRDLRWRAPQPAPEWSDIRSAREFGAQCFQPLRDATANS
YAGAETMSEDCLYLNVWARPGTRRAPVIVYIHGGAFYTGAGSFPIYDGETIARHGAVF
VNLNYRVGPLGFLALPELSAESPQGTSGNYGLLDQIAALGWIKRNIAAFGGDPDNITI
IGQSAGSMSVLALQASPLAKGLFQRAVGMSGAMIAGAITLPSRTDAETAGSKLEAGWK
ATSLSQLRAMPADRLIVPRVPGGPSTGPAIDGYVLPGPIPEIFRSGEQADVPLLVGFT
RDEALGGMGPISGLDEYRAKARSLYGDRAERFLELFPAANDAEAKAQARLADRDNTVA
LGMFSWAALQQTYGHAPVYSYEFAHPHSFAAGVTFSDLDPVKAGAYHTSEVPFWLGTL
DSFNRFRHTRDWTANDRRISEKMVNALIAFARTGTPDVPSAEFPPFDASAPQLMMIAD
DLHPAPWPAREQLFFFDTSGKAPRP"
misc_feature 463383..464801
/locus_tag="PP1Y_Mpl4586"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature 463383..464798
/locus_tag="PP1Y_Mpl4586"
/note="Carboxylesterase family; Region: COesterase;
pfam00135"
/db_xref="CDD:201026"
misc_feature order(463686..463694,463944..463952,463959..463961,
464376..464378,464388..464393,464469..464471,
464601..464603,464610..464612)
/locus_tag="PP1Y_Mpl4586"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29383"
misc_feature order(463947..463949,464292..464294,464598..464600)
/locus_tag="PP1Y_Mpl4586"
/note="catalytic triad [active]"
/db_xref="CDD:29383"
gene complement(464931..465905)
/locus_tag="PP1Y_Mpl4607"
/db_xref="GeneID:10718291"
CDS complement(464931..465905)
/locus_tag="PP1Y_Mpl4607"
/inference="protein motif:COG:COG0179"
/inference="similar to AA sequence:UniProt:A4JEE1"
/note="KEGG: nar:Saro_3422"
/codon_start=1
/transl_table=11
/product="fumarylacetoacetate (FAA) hydrolase"
/protein_id="YP_004538356.1"
/db_xref="GI:334145146"
/db_xref="GeneID:10718291"
/translation="MRLATIAGATPDGTLVVVSQDGRRMLAAGPQMPNLLGAMERWDA
LQPHLAALARRLEAGEGEPLDPGALRAPLPRTWQWLDGSAFGTHGDLMQIAFKLPPIE
TDRPLMYQGISDRFYGPGDPVPFPDPADGIDFEGEFGVIVDAVPMGTTAEEAMKHIRL
VVQINDWSLRTIAPVEMKTGFGWVQAKPACSMAPFAVTPEALGDAWQDGRVCLDLVIE
WNGKAFGHANGAAMDFGFHELVAHAARTRDLVAGTVIGSGTVSNPNYAEVGSSCISEV
RAIEMIAGGKPSTAFMGYGDTIRMEARAKDGLAPFGAIDQRVAKPATR"
misc_feature complement(465099..>465692)
/locus_tag="PP1Y_Mpl4607"
/note="2-keto-4-pentenoate
hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
(catechol pathway) [Secondary metabolites biosynthesis,
transport, and catabolism]; Region: MhpD; COG0179"
/db_xref="CDD:30528"
misc_feature complement(464949..465665)
/locus_tag="PP1Y_Mpl4607"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; pfam01557"
/db_xref="CDD:201859"
gene complement(465911..466690)
/locus_tag="PP1Y_Mpl4613"
/db_xref="GeneID:10718292"
CDS complement(465911..466690)
/locus_tag="PP1Y_Mpl4613"
/inference="protein motif:COG:COG1878"
/inference="similar to AA sequence:UniProt:A4JED9"
/note="KEGG: nar:Saro_0716"
/codon_start=1
/transl_table=11
/product="putative cyclase"
/protein_id="YP_004538357.1"
/db_xref="GI:334145147"
/db_xref="GeneID:10718292"
/translation="MARRFVDLSITLCNDVITDPPFLKPEITYQTHGETMGELGHFFP
GVTAEQTPDGAGFAAAEWVKLTTHSGTHLDAPWHFHPTQDGGKPALTIDEVPLEWCFQ
PGVKLDFRHFEDGYVVTAKDVEDELARIGHELKPLEIVVVNTAAGKALGDPDYVSRGC
GMGYEATMYLTERGVRVTGTDAWSWDAPFVHTARKVEETGDTSLIWEGHKAGRDIGYC
HIEKLHNLEVLPADGFTISCFPHKIKGASAGWIRAVAIFED"
misc_feature complement(466124..466678)
/locus_tag="PP1Y_Mpl4613"
/note="Putative cyclase; Region: Cyclase; pfam04199"
/db_xref="CDD:190907"
gene complement(466828..467985)
/locus_tag="PP1Y_Mpl4625"
/db_xref="GeneID:10718293"
CDS complement(466828..467985)
/locus_tag="PP1Y_Mpl4625"
/inference="protein motif:COG:COG0596"
/inference="similar to AA sequence:UniProt:B9JQ86"
/note="KEGG: nar:Saro_0714"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538358.1"
/db_xref="GI:334145148"
/db_xref="GeneID:10718293"
/translation="MALFEYFPNYIWNLSVAIAMESGGRIGEVIDMCKPIKDAADAGA
DAGTPAFMKQWVAMGDKLIELAAEDEARGRLFSASNKLERAALYMFTGERMQGHGHPG
RKETYAKARAAFDKSTQIGRINRERVEIPLEKGTMPALFTRAPGEGRKPVVVFCNGLD
SCKELLYWTQLPEQLARRGISTLCVDQPGSGETLRLQGLPVDPHSESWASKAVDWLEQ
QDNVDPRAIGMTGISLGGHFAPRAVAYEPRFASGAVWGANHNWREVQDKRMAREGENP
VPHYWAHVHWAFGAKDQEDFLAKSEAMNLNGHMDGIKVPFLVTHGANDRQISPQYADD
LYDQLVNSPRREKVIFTAREGGVEHVGADNMSYGRDLLSDWFAETLGGKTA"
misc_feature complement(466918..467532)
/locus_tag="PP1Y_Mpl4625"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_5;
pfam12695"
/db_xref="CDD:205024"
misc_feature complement(466963..>467355)
/locus_tag="PP1Y_Mpl4625"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene complement(467989..468900)
/locus_tag="PP1Y_Mpl4634"
/db_xref="GeneID:10718294"
CDS complement(467989..468900)
/locus_tag="PP1Y_Mpl4634"
/inference="protein motif:COG:COG0346"
/inference="similar to AA sequence:UniProt:Q2GAG3"
/note="KEGG: nar:Saro_0713"
/codon_start=1
/transl_table=11
/product="glyoxalase/bleomycin resistance
protein/dioxygenase"
/protein_id="YP_004538359.1"
/db_xref="GI:334145149"
/db_xref="GeneID:10718294"
/translation="MTRVTEIRFVGYGVEDFDAERKFYTDDWGLVEVPGSGDKADMAW
FKTQGHGEHHVVRLHKSDANHVEVIAFAADSRADVDALFGKIEAAGCKVIFAPRDLDA
PGGGYGFRFFSPDGLPFEISAGVETLEARELERWEGVPLKISHIVLHSPDHQAMVKFF
TDVLGFRISDWLGDFMCFLRCNEAHHRVAILPGPPCLNHVAYDMPSIDDMFRGAHRLK
QHGTDIRWGPGRHTAGNNTFSYFVTPGGFAVEYTSELEVVDFETHEYKVHKPAPMVMD
QWGIGTGGPQTMPHPAPDARLFQASEF"
misc_feature complement(468148..468891)
/locus_tag="PP1Y_Mpl4634"
/note="2,3-dihydroxybiphenyl 1,2-dioxygenase; Region:
23dbph12diox; TIGR03213"
/db_xref="CDD:132257"
misc_feature complement(468520..468891)
/locus_tag="PP1Y_Mpl4634"
/note="This domain superfamily is found in a variety of
structurally related metalloproteins, including the type I
extradiol dioxygenases, glyoxalase I and a group of
antibiotic resistance proteins; Region: Glo_EDI_BRP_like;
cl14632"
/db_xref="CDD:211465"
misc_feature complement(order(468541..468543,468547..468549,
468571..468573,468697..468699,468724..468726,
468730..468732,468775..468777,468862..468864,
468874..468876))
/locus_tag="PP1Y_Mpl4634"
/note="active site"
/db_xref="CDD:211348"
misc_feature complement(order(468541..468543,468697..468699,
468874..468876))
/locus_tag="PP1Y_Mpl4634"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:211348"
misc_feature complement(468061..468486)
/locus_tag="PP1Y_Mpl4634"
/note="C-terminal, catalytic, domain of BphC5
(2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium
Rhodococcus rhodochrous K37 and similar proteins; Region:
BphC5-RK37_C_like; cd07239"
/db_xref="CDD:176663"
misc_feature complement(order(468151..468153,468181..468183,
468199..468204,468208..468210,468298..468300,
468304..468306,468343..468345,468367..468369,
468460..468462,468466..468468))
/locus_tag="PP1Y_Mpl4634"
/note="putative active site [active]"
/db_xref="CDD:176663"
misc_feature complement(order(468151..468153,468181..468183,
468304..468306,468466..468468))
/locus_tag="PP1Y_Mpl4634"
/note="Mn binding site [ion binding]; other site"
/db_xref="CDD:176663"
misc_feature complement(order(468061..468072,468082..468087,
468091..468096,468211..468213,468244..468246,
468256..468258,468265..468270,468277..468279,
468325..468327,468376..468378))
/locus_tag="PP1Y_Mpl4634"
/note="putative oligomer interface [polypeptide binding];
other site"
/db_xref="CDD:176663"
gene complement(468927..470042)
/locus_tag="PP1Y_Mpl4640"
/db_xref="GeneID:10718295"
CDS complement(468927..470042)
/locus_tag="PP1Y_Mpl4640"
/inference="protein motif:COG:COG0654"
/inference="similar to AA sequence:UniProt:Q2GAG4"
/note="KEGG: nar:Saro_0712"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538360.1"
/db_xref="GI:334145150"
/db_xref="GeneID:10718295"
/translation="MKDLNTLIIGGGIGGLSAAIALRRAGHGVTVIEKDPEWSVYGVG
IIQQSNVIRAMDQLGVLDAFLGAACGFDAVEIYLPDGTRVARVPSPALVEGKPANVGI
GRRALQKVLGDSAMQLGAEIRLGVAAERFDDDGEGVNVRFSDGREERFDVVVGADGVY
SQTREAILPDAEKPQFTGQAVWRYNFPRPADLDALHVYNGPIGSGLVPMSEELMYMYV
TTPEPDNPWYPTEGIAAVMRSKLARAAPQIRALAEQITSDEGVVYRPLEGMMLYGSWS
KGRIALLGDAVHATTPHLGQGAGMAIEDALVLAEELTRADTPEAAFEAYRDRRFERCR
YIVEKSLEICHGQIGKGPPVDNHKATAEMFAVVSQPI"
misc_feature complement(468930..469976)
/locus_tag="PP1Y_Mpl4640"
/note="hypothetical protein; Provisional; Region:
PRK06847"
/db_xref="CDD:180727"
misc_feature complement(469026..469976)
/locus_tag="PP1Y_Mpl4640"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene complement(470097..471473)
/locus_tag="PP1Y_Mpl4647"
/db_xref="GeneID:10718296"
CDS complement(470097..471473)
/locus_tag="PP1Y_Mpl4647"
/EC_number="3.2.1.21"
/inference="protein motif:COG:COG2723"
/inference="similar to AA sequence:UniProt:Q2GA89"
/note="assigned by KAAS to KEGG Orthology:K05350
beta-glucosidase"
/codon_start=1
/transl_table=11
/product="beta-glucosidase"
/protein_id="YP_004538361.1"
/db_xref="GI:334145151"
/db_xref="GeneID:10718296"
/translation="MKKGPGPLLGKTLNAISGVNRREVLMGSVALGLAANSRPAIAGR
EAPNGRKGTFPSGFLWGASTAGHQVEGNNLASDTWALEHLNPTNFTEPSGDACDSFHR
WPLDLDIVRDLGLNSVRFSVEWARIEPEAGEFSVAMLDHYKAMVEGCRERGLKPLVSF
NHFTCPRWFAMRGGWTNPDAPSLFARYCDRLARHLGESIERATTLNEPNLMLLLRYKL
PSGVFAKNDVVQAAASKAYGSSTFVSSFIENEEQSHAVQPILMEAHRQAKAAIKAARS
DLPVGVTLAIEDDQPFGEGSQIAKKRAMCYDDWLRVARADDFIGVQNYERARIGPEGQ
MSPPAGAVLTDRGAEIYPPSLAGAVRYAWSQTKVPVLVTEHGIGTSDDRQRAGFIPAS
LQHLAEAIAEGVPVLGYCHWSLLDNFEWIFGYTPKFGLVEVNRTTFARTPKPSAHVLA
GIARKNAV"
misc_feature complement(470100..471317)
/locus_tag="PP1Y_Mpl4647"
/note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
galactosidase [Carbohydrate transport and metabolism];
Region: BglB; COG2723"
/db_xref="CDD:32615"
gene complement(471473..473848)
/locus_tag="PP1Y_Mpl4662"
/db_xref="GeneID:10718297"
CDS complement(471473..473848)
/locus_tag="PP1Y_Mpl4662"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:Q2GA91"
/note="KEGG: nar:Saro_0787"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538362.1"
/db_xref="GI:334145152"
/db_xref="GeneID:10718297"
/translation="MRTTFTAILLSATFLGGASAQAQEVDAAAAEGAGTEIIVTAQRR
SESIQRVPVSVTALTQDTLASQNLNDLTQVSRAAPSLQIGVDNSFAVRGVGTLSFAGT
IDSSVAVAIDDVNLGRPVLNSPLLNDLARVEVLNGPQGLLFGKNASAGLLNIVTARPV
LGAYTSATNLELAMRDTPGSGRNAPGIIARETLNIPISDNSALRLAGLYSYQEPGTTY
VGTPSPGTRHDLNATSYSLKAKYLAELTDSLTFYGIADYNESHGIAGIFDNSYRQVDA
TSTNSPALAADGITPGTKNLLFGGDADQFRDIETGGAQGQVTYAFDSGFEISNLFAWR
YYEQDQSLDGDYLSADGFNTNASQSSYNQFSNELRVALPSGNRLSGQVGLYWFKSTLD
LSRQLGGNSYLPAFVLSGYPFCVGATPVPGANPPVCSVNNQSQVGGDRDYSLDTESYA
AFGQLTYEVIDGFKLIAGGRVTHDKIDLDLTQNQVNYFQSIGGPRGRFESHYSNTDFS
WKLGAQFQATPTVMLYGFYGRGYKGPGFNDSFPTADADVVVREETSKTAEIGVKSSFL
DRRLVVNLSAFHTDFNNFQVQSFDPNLSTFVVQNAAKVVSKGIEANVILAPFEGLTIN
GSGSLLSSKFKDFVGAQCYPTQTTYGCSATVNVFDASGLTLPAAPKFTSSLQVRYEVP
TSGSIVPFLQGNWYHRSSINYLVNRAPGAGLDVIDIFGASIGARIADNLRVSIFCKNC
TNKINPTAIGVESGDANARDSRGGATPKLTYTQQFGLDSVRTVGLNLGFDF"
misc_feature complement(471524..473746)
/locus_tag="PP1Y_Mpl4662"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature complement(471524..473689)
/locus_tag="PP1Y_Mpl4662"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(473381..473407,473441..473473,
473501..473524,473543..473560,473603..473632,
473660..473689))
/locus_tag="PP1Y_Mpl4662"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(472709..472711,472826..472828))
/locus_tag="PP1Y_Mpl4662"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 474002..474910
/locus_tag="PP1Y_Mpl4683"
/db_xref="GeneID:10718298"
CDS 474002..474910
/locus_tag="PP1Y_Mpl4683"
/inference="protein motif:COG:COG0583"
/inference="similar to AA sequence:UniProt:Q2G901"
/note="KEGG: nar:Saro_1227"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_004538363.1"
/db_xref="GI:334145153"
/db_xref="GeneID:10718298"
/translation="MRFKGMDLNLLVAFEALMETRNTARAGEKIGLSQPATSAALSRL
RAYFRDELLVVKGRRMFPTPLAETLLPRVRACLRSAESVISTSSQFDPARAERLFRIV
ASDYVSAALLSPLLRSLETSAPGVMLDLMPPESHSADLLRRGVVDLMITPSEYGSSGL
PTEPLYEDNFVVAGCLNHPLFASQFTMEDIFTYGHIAVSLGETGSTTVGDRQLNLLGH
ARKVDIIAHSFTVVPWMLVGTQRLAIMHERLAHIAASHFSITYRPLPQAIEPLRQIIQ
YHETRASDPGLRWLIDLIRAEVKSPI"
misc_feature 474017..474904
/locus_tag="PP1Y_Mpl4683"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature 474023..474202
/locus_tag="PP1Y_Mpl4683"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 474296..474892
/locus_tag="PP1Y_Mpl4683"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature order(474338..474343,474347..474352,474359..474361,
474371..474373,474377..474397,474668..474685,
474701..474706,474710..474715)
/locus_tag="PP1Y_Mpl4683"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene complement(474899..476167)
/locus_tag="PP1Y_Mpl4692"
/db_xref="GeneID:10718299"
CDS complement(474899..476167)
/locus_tag="PP1Y_Mpl4692"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:Q0B9Q3"
/note="assigned by KAAS to KEGG Orthology:K08191 MFS
transporter, ACS family, hexuronate transporter"
/codon_start=1
/transl_table=11
/product="MFS transporter ACS family hexuronate
transporter"
/protein_id="YP_004538364.1"
/db_xref="GI:334145154"
/db_xref="GeneID:10718299"
/translation="MAIFKGKLRWWMIGLVTLGTIMNYLARSTLSVAAPTLKDEFGMT
TEQYSWVVLAFQASYTAMQTVAGALLDSLGTRLGFFIFAMGWALANMGHALATGWPSL
AAFRAALGATEAAAIPAGAKVTSEWFPAHQRPLATSCFQMGTSVGSMLAPPLVAFCIL
WWGWQEAFLITGGLSVAWALLWWFGYRKPEEHPAITPGELEELSKNDRGQEGEARPAT
RGAVLRSRGFWAIAVPRFLAEPAWQTFNFFIPLYLVSVWGLNLRDIALWAWLPFLAAD
FGSLAAGILPNALMRRGAGMIASRKVTMTVGALCMIGPACIGLAGSPGLAIALFCVGG
FAHQMLNGALITLCADIFDTRAVGTASGMAGSIAWIGGMLFTFLIGQSADQFGYAPLF
VALGCLDLLGACVLWGLLRSPKGSAGRSYG"
misc_feature complement(474941..476131)
/locus_tag="PP1Y_Mpl4692"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(474947..476116)
/locus_tag="PP1Y_Mpl4692"
/note="D-galactonate transporter; Region: 2A0114;
TIGR00893"
/db_xref="CDD:162094"
misc_feature complement(order(475052..475054,475061..475066,
475073..475078,475085..475090,475121..475123,
475130..475135,475145..475147,475154..475159,
475166..475168,475331..475333,475343..475345,
475352..475354,475364..475366,475376..475378,
475418..475420,475427..475432,475439..475444,
475451..475453,475724..475726,475742..475747,
475754..475759,475793..475795,475802..475807,
475814..475819,475826..475831,475967..475972,
475976..475981,475991..475993,476000..476005,
476012..476014,476063..476068,476072..476080,
476087..476089))
/locus_tag="PP1Y_Mpl4692"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(476194..478848)
/locus_tag="PP1Y_Mpl4709"
/db_xref="GeneID:10718300"
CDS complement(476194..478848)
/locus_tag="PP1Y_Mpl4709"
/inference="protein motif:COG:COG3250"
/inference="similar to AA sequence:UniProt:A4XF17"
/note="KEGG: nar:Saro_3669"
/codon_start=1
/transl_table=11
/product="glycoside hydrolase family protein"
/protein_id="YP_004538365.1"
/db_xref="GI:334145155"
/db_xref="GeneID:10718300"
/translation="MAIAGACLLPVTTPALAASHAQQADGLRTVVELGEGWRFRKGDI
PAQSPEFDDRDWSTVTVPHTWNRIGEYDASAHVPGSSGRKIDKYMGVAWYRLSFVSPA
TGPTKRVWLEFDAASRTAEVWLNGKRLGAHAGGFSRFRFDATDAIRKGGRNFLAVRVD
NSEPQPGNATANTLPLAGDFFVQGGLYRPVRLIVTDATHFAMDDFGGPGIYARTQSIA
SGAATVSVESKLSTERSGPVHGSVVTRLVAADGTIVARSVSPFHLQSGAKVEVSQELT
VPDAHLWQGTADPYLYSLESELRDGNGRLLDRAKQSFGIRQFRIDPEKGFFINGQHVA
LHGVGLHQDGMESGWAMTKSQIADRFETVRDMGANTIRLTHYQHGQSIHDLADKYGLV
LWDEIALVTAWTLDQAQGDAPPEIMAQARQQLVELIRQNYNHPSVALWGIANEVDFGP
MRPDFLGRGLKVSPSDPTPMLEELAAIVRREDPDRSAALATCCEDRDMPDVPIVANAV
PVSGGNRYFGWYYGKPEEVGPHFDALHAKRPSQPQAITEYGAGGALSIHTDNPLGGPF
DMGGHDQPEEYQSWLHEKTWPYLEERPFLFASWLWNAFDFATVTRTEGDAKDINTKGL
VSYDGRIRKDAFYYYRAHWSDQPTVHVNGRRYVQRAYPTTDISVYSNAPRTKLFLNGK
DLGEQGKCDNLVCVWSGVQLSAGANTVEAVGSFADRDVRDAVSWNLDASRASAYYIDS
GALVAAPGYGSDTFFNGGRAGSTDQHPRGRPPVLAPIVPDEEHAQLATFREGTFSYRL
PVEPGRYSITLRFLEPKATAGERVFDVKANGKTVIAALDVAKEAGAPITLVARTVTLD
VTENAIDLQFLPRKGDAIVSTIEVRPSA"
misc_feature complement(476899..478767)
/locus_tag="PP1Y_Mpl4709"
/note="beta-D-glucuronidase; Provisional; Region:
PRK10150"
/db_xref="CDD:182269"
misc_feature complement(478261..478767)
/locus_tag="PP1Y_Mpl4709"
/note="Glycosyl hydrolases family 2, sugar binding domain;
Region: Glyco_hydro_2_N; pfam02837"
/db_xref="CDD:202424"
misc_feature complement(477901..478221)
/locus_tag="PP1Y_Mpl4709"
/note="Glycosyl hydrolases family 2; Region:
Glyco_hydro_2; pfam00703"
/db_xref="CDD:201405"
misc_feature complement(477025..477879)
/locus_tag="PP1Y_Mpl4709"
/note="Glycosyl hydrolases family 2, TIM barrel domain;
Region: Glyco_hydro_2_C; cl15381"
/db_xref="CDD:212627"
misc_feature complement(476251..476679)
/locus_tag="PP1Y_Mpl4709"
/note="Di-glucose binding within endoplasmic reticulum;
Region: Malectin; pfam11721"
/db_xref="CDD:204721"
gene complement(478940..479896)
/locus_tag="PP1Y_Mpl4736"
/db_xref="GeneID:10718302"
CDS complement(478940..479896)
/locus_tag="PP1Y_Mpl4736"
/EC_number="2.7.1.45"
/inference="protein motif:COG:COG0524"
/inference="similar to AA sequence:UniProt:A5V7I4"
/note="assigned by KAAS to KEGG Orthology:K00874
2-dehydro-3-deoxygluconokinase"
/codon_start=1
/transl_table=11
/product="2-dehydro-3-deoxygluconokinase"
/protein_id="YP_004538366.1"
/db_xref="GI:334145156"
/db_xref="GeneID:10718302"
/translation="MTEVRRIVCLGECMLELSRQPGGAEGWRMGFGGDTLNTAVHLSR
SGHRVSYMTALGSCPFSENLRRAWESEGIDCSLVATHPTRRPGLYAISTNLEGERSFT
YWRESSAARAMFEISEIEEAIAKAEAADLLYFSLISMAILPPQGRRDLILLAKAVREA
GGLVAFDSNYRPLLWESREAAQYWRDQAIALANIGLPTFEDEAQLCDARDEVAVAAHW
QGLGCEEVIVKLGARGCMLPDGNACAVPLAVTPVDTSGAGDAFNAAYLAARMRGASVL
ESALAGHRLAGWCVMHPGAIPQRDPSAPYGRTEPNALAEPRR"
misc_feature complement(479006..479881)
/locus_tag="PP1Y_Mpl4736"
/note="Sugar kinases, ribokinase family [Carbohydrate
transport and metabolism]; Region: RbsK; COG0524"
/db_xref="CDD:30870"
misc_feature complement(479009..479881)
/locus_tag="PP1Y_Mpl4736"
/note="2-keto-3-deoxygluconate kinase (KdgK)
phosphorylates 2-keto-3-deoxygluconate (KDG) to form
2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the
common intermediate product, that allows organisms to
channel D-glucuronate and/or D-galacturinate into the...;
Region: KdgK; cd01166"
/db_xref="CDD:29350"
misc_feature complement(order(479012..479014,479120..479122,
479129..479131,479384..479386,479486..479488,
479582..479584,479588..479590,479630..479632,
479786..479788,479795..479800))
/locus_tag="PP1Y_Mpl4736"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29350"
misc_feature complement(order(479036..479038,479048..479050,
479114..479116,479123..479131,479156..479158,
479195..479197,479210..479212))
/locus_tag="PP1Y_Mpl4736"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29350"
gene complement(479912..481120)
/locus_tag="PP1Y_Mpl4747"
/db_xref="GeneID:10718303"
CDS complement(479912..481120)
/locus_tag="PP1Y_Mpl4747"
/inference="protein motif:COG:COG4948"
/inference="similar to AA sequence:UniProt:P38104"
/note="KEGG: nar:Saro_3675"
/codon_start=1
/transl_table=11
/product="mandelate racemase/muconate lactonizing protein"
/protein_id="YP_004538367.1"
/db_xref="GI:334145157"
/db_xref="GeneID:10718303"
/translation="MKIESARVIVTCPGRNFVTLKIITDQGVYGIGDGTLNGRETAVV
AYLEDHVIPCLIGMDPRRIEDIWQYLYRGAYWRRGPVTMRAIAAVDMALWDIKAKMAG
MPLYQLLGGRSRDGVMVYGHANGSDIGETVEAVGHYIDMGYKAIRAQTGVPGIKDAYG
VGRGKLYYEPADAALPSVTGWDTRKALNYVPKLFEELRKTYGFDHHLLHDGHHRYTPQ
EAANLGKMLEPYQLFWLEDCTPAENQEAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQN
QLIDYIRTTVVGAGGITHLRRIADLAALYQIRTGCHGATDLSPVTMGCALHFDTWVPN
FGIQEYMRHTEETDAVFPHDYRFDEGELFVGETPGHGVDIDEKLAAKYPYKPAYLPVA
RLEDGTMWNW"
misc_feature complement(479915..481120)
/locus_tag="PP1Y_Mpl4747"
/note="bifunctional D-altronate/D-mannonate dehydratase;
Provisional; Region: PRK15072"
/db_xref="CDD:185032"
misc_feature complement(479915..481117)
/locus_tag="PP1Y_Mpl4747"
/note="The starvation sensing protein RpsA from E.coli and
its homologs are lactonizing enzymes whose putative
targets are homoserine lactone (HSL)-derivative. They are
part of the mandelate racemase (MR)-like subfamily of the
enolase superfamily. Enzymes of...; Region: rpsA; cd03322"
/db_xref="CDD:73347"
misc_feature complement(order(480104..480106,480185..480187,
480266..480268,480335..480337,480413..480415,
480419..480421,480491..480493,480674..480676,
480680..480682,480761..480763))
/locus_tag="PP1Y_Mpl4747"
/note="putative active site pocket [active]"
/db_xref="CDD:73347"
misc_feature complement(order(480335..480337,480413..480415,
480491..480493))
/locus_tag="PP1Y_Mpl4747"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:73347"
gene 481447..482847
/locus_tag="PP1Y_Mpl4762"
/db_xref="GeneID:10718304"
CDS 481447..482847
/locus_tag="PP1Y_Mpl4762"
/EC_number="5.3.1.12"
/inference="protein motif:COG:COG1904"
/inference="similar to AA sequence:UniProt:B4RGF5"
/note="assigned by KAAS to KEGG Orthology:K01812
glucuronate isomerase"
/codon_start=1
/transl_table=11
/product="glucuronate isomerase"
/protein_id="YP_004538368.1"
/db_xref="GI:334145158"
/db_xref="GeneID:10718304"
/translation="MTRTLELHPDRLLPADPSTRAIARELYQSIASLPIISPHGHTDP
HWFAANETFGNAADLLLAPDHYVFRMLYSQGVDLQDLGIGKSDADPREAWRLFAERYH
LFRGTPSRIWLDWVFAEAFGIDVILEARTSDLYFDAITAKLATDAFRPRALFERFNIE
VIATTEGPLDRLEHHQAIRKSGWSGRVITAYRPDPVVDPEFEGFHDNLAKLSELTGED
CHSWTGYLDAHRKRRAFFAQMGATSTDHGHPTARTADLSAGEAEDLFARVIRKNCSAA
DAELFRAQMLTEMAAMSLDDGLVMQLHPGAYRNHNRDIFKAFGRDKGADIPSRTEYVS
ALKPLLDRFGNRPDFTLILFTLDESVYARELAPLAGHYPCLRLGPAWWFHDSPEGMRR
FRKATTETAGFYNTVGFNDDTRAFLSIPARHDLARRIDCGFLAELVAEHRLNDWEAAE
LAQDLAYNLAKKAYKL"
misc_feature 481465..482844
/locus_tag="PP1Y_Mpl4762"
/note="glucuronate isomerase; Reviewed; Region: PRK02925"
/db_xref="CDD:179502"
gene 482889..484214
/locus_tag="PP1Y_Mpl4777"
/db_xref="GeneID:10718305"
CDS 482889..484214
/locus_tag="PP1Y_Mpl4777"
/EC_number="1.1.1.57"
/inference="protein motif:COG:COG0246"
/inference="similar to AA sequence:UniProt:Q0AT70"
/note="assigned by KAAS to KEGG Orthology:K00040
fructuronate reductase"
/codon_start=1
/transl_table=11
/product="fructuronate reductase"
/protein_id="YP_004538369.1"
/db_xref="GI:334145159"
/db_xref="GeneID:10718305"
/translation="MQERFGYDRDRGTVGIVHFGIGAFHRAHQAWYTDKAMDAGDSEW
MILGVSLRSGGVSLEMKPQDGLYTVTERSGEDMRSRLVGAVQDVLLAPNESDRLIRQL
ADPQTRIVTFTVTEKGYCQTPEGALDFSRTDEGSFYPYLAQAMRLRSEAGISGLTLLS
CDNLSHNGRQLKRLIRQYLEARAPDLMTWFENECRCPSSMVDRIVPAPTDADRAGLAE
RLGMEDRAAVFTEPFSQWVIEDDFAGERPRWERAGAELVADVSSFETAKLRMLNGAHS
ALAYLGLRAGHDYIHEAITDMRLRPIVEGLMRDEAAPTISVSPGQDLAAYATSLLDRF
TNSALNHRLAQIAMDGSQKIPQRWLETLEANRQMGRPCPSIIAALEAWFDHLRGMNGT
VEDPLSDQLAKLAKESSNSSLALSMFGCQGILAGTWNISNDELNAAFAE"
misc_feature 482898..484163
/locus_tag="PP1Y_Mpl4777"
/note="D-mannonate oxidoreductase; Provisional; Region:
PRK15037"
/db_xref="CDD:184997"
misc_feature 482931..483380
/locus_tag="PP1Y_Mpl4777"
/note="Mannitol dehydrogenase Rossmann domain; Region:
Mannitol_dh; pfam01232"
/db_xref="CDD:144722"
misc_feature 483474..484133
/locus_tag="PP1Y_Mpl4777"
/note="Mannitol dehydrogenase C-terminal domain; Region:
Mannitol_dh_C; pfam08125"
/db_xref="CDD:149275"
gene 485211..486032
/locus_tag="PP1Y_Mpl4801"
/db_xref="GeneID:10718306"
CDS 485211..486032
/locus_tag="PP1Y_Mpl4801"
/inference="protein motif:COG:COG4625"
/inference="similar to AA sequence:UniProt:B4DAG5"
/note="KEGG: ppg:PputGB1_2865"
/codon_start=1
/transl_table=11
/product="outer membrane autotransporter"
/protein_id="YP_004538370.1"
/db_xref="GI:334145160"
/db_xref="GeneID:10718306"
/translation="MLTGGLKQGNYKARADRPSANSDSRSIRAGIDVTAMDGLILGAT
IGIDGIDANLDRAQHPRITQFNASVGPYASYTNGKIYADATAAYSLSQYKLRRQVAWS
GFSDQLRAGVEGDNASATVEVGGILQTGVLRAQPFVGLQYRYADVSGFIEYGGDAALA
VAGYKTESVRSSLGLRTSAGLERGSWNIRPTVRAEWQRELNSRPDSRVEAAFANGDLP
IFTLKSSRMARDAAIVGAGLSAVYNDRTAIRIGYDGEFASDRHIHAFTLTASRRF"
misc_feature 485244..485999
/locus_tag="PP1Y_Mpl4801"
/note="Autotransporter beta-domain; Region:
Autotransporter; smart00869"
/db_xref="CDD:197937"
gene 486164..486853
/locus_tag="PP1Y_Mpl4816"
/db_xref="GeneID:10718308"
CDS 486164..486853
/locus_tag="PP1Y_Mpl4816"
/inference="protein motif:COG:COG1475"
/inference="similar to AA sequence:UniProt:A5VC33"
/note="assigned by KAAS to KEGG Orthology:K03497
chromosome partitioning protein, ParB family"
/codon_start=1
/transl_table=11
/product="ParB family chromosome partitioning protein"
/protein_id="YP_004538371.1"
/db_xref="GI:334145161"
/db_xref="GeneID:10718308"
/translation="MAGFLRDILTTLSYEPAAADQIPADGAALSRLDQRLAGFVQNSG
QNRSAITIRPNDCSVWDGNPRDQPGLTSENCRSLIESIAQEDGNRIPVLVRRNPPGSD
APYELIVGSRRRFSVDWLNHNGRPEIRLNALVVDLSDEEAFRLADIENREREDITELD
RARSYQNAVDRFYGGGSVAHGNCAQSFEQPAEPATCLGPDAGRGGRRLRNARRVARTA
FGSADAATAQA"
misc_feature 486353..486616
/locus_tag="PP1Y_Mpl4816"
/note="ParB-like nuclease domain; Region: ParB;
smart00470"
/db_xref="CDD:197744"
gene 487794..489812
/locus_tag="PP1Y_Mpl4839"
/db_xref="GeneID:10718309"
CDS 487794..489812
/locus_tag="PP1Y_Mpl4839"
/inference="ab initio prediction:grc:1.0"
/inference="protein motif:COG:COG1530"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538372.1"
/db_xref="GI:334145162"
/db_xref="GeneID:10718309"
/translation="MRNNHSSFSAGSLRRRSRFQGRCWGRRFAVRPDRSRWSFRAHRS
IRPDGPQRSFRAHRPFRPDRSQRSFRTHRSIRPDRFQRSFRTHRSIRPDRSQRSFRTH
RSIRPDGPQRSFRAHRPFRPDGSQRSYRAHRSIRPDRSQRSFRTHRSIRPDRSQRSFR
THRSIRPDGPQRSFRAHRPSGPTDPSGPTGPTDPSGPTDPSGPSGPTGFTGTLIGATV
DDTTVVGPSGTDTLADVNLLPSTATDAQDTLAVDVLAGDGTVVQVVLPTSAEGVQDTL
APVGNLAGALLGEQVGNLVNDTTGALSPTVASLTSTVDQVASPLLDTVNGLTSPLLGD
GGLLEPVTGVTDGLLGGLTDGLPVGGNEPARTYDGPLLGLDLGNNLVTGPTTSDTLAG
VNLLSDGTSLAEGQLVTAEVLSGDTVLDVSLPTTAEGITDGLAPVGNLTGALLGEQVG
SLVDQVSGTAAPVLAPVTGIVDGLTAPVLDTVNSTLGGVVGDTAGGLLEPITGGLLNG
GEQGGLLAPVTGVVDSTLGGLSGGGESGGLLAPVTGIVDTLTGGSADGGVLAPVTGVV
DSALGGLSGGSESGGLLAPVTGIVDTLTGGSADGGVLAPVTGVVDSTLGGLSGGGESG
GLLAPVTGIVGSLTGGLTGGTDGAPDTGTSSPIAPVTGLLGGLLGGSN"
gene 490418..491323
/locus_tag="PP1Y_Mpl4853"
/db_xref="GeneID:10718310"
CDS 490418..491323
/locus_tag="PP1Y_Mpl4853"
/inference="protein motif:COG:COG2200"
/inference="similar to AA sequence:UniProt:Q13FV3"
/note="KEGG: bxe:Bxe_C1172"
/codon_start=1
/transl_table=11
/product="diguanylate phosphodiesterase"
/protein_id="YP_004538373.1"
/db_xref="GI:334145163"
/db_xref="GeneID:10718310"
/translation="MPSDGPLLPSQTQIRLYREDMVQAAALLERIGREEAFFVWRPIF
KPQEPDRVLHYEALLRLPGEQGEQLECTLAYAALERLGLAYLADKHAASRVLDELEAD
PLASISFAISAQSLSPHLHGRDAAWTELLARLRADKGLAARLVLEIHETAPMTGFAEV
QALVGQMRALGARICIAGFGSGFASTRQLLMIQPDIVKLDSIFLHTAYQCERNRNRIS
HLIGLARTLSNTLVIDGVETPWHMKLAREENVQWIAGPLQGRASTRRAWLAKPQKPRA
NGGEETVDDNLVFLPQPAGQAVQLR"
misc_feature 490490..491200
/locus_tag="PP1Y_Mpl4853"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene 492163..493821
/locus_tag="PP1Y_Mpl4876"
/db_xref="GeneID:10718311"
CDS 492163..493821
/locus_tag="PP1Y_Mpl4876"
/inference="similar to AA sequence:UniProt:A5VC28"
/note="KEGG: swi:Swit_3496"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538374.1"
/db_xref="GI:334145164"
/db_xref="GeneID:10718311"
/translation="MSITRIARLRRQALISAATLPLLLLGACAGGVGFHGGVGNPGGP
TEPGGPTGPTDPSDPSGPTDPSGPTGPTDPSGPTDPSGPSGPTGFTGTLIGATVDDTT
VVGPSGTDTLADVNLLPSTATDAQDTLAVDVLAGDGTVVQVVLPTSAEGVQDTLAPVG
NLAGALLGEQVGNLVNDTTGALSPTVASLTSTVDQVASPLLDTVNGLTSPLLGDGGLL
EPVTGVTDGLLGGLTDGLPVGGNEPARTYDGPLLGLDLGNNLVTGPTTSDTLAGVNLL
SDGTSLAEGQLVTAEVLSGDTVLDVSLPTTAEGITDGLAPVGNLTGALLGEQVGSLVD
QVSGTAAPVLAPVTGIVDGLTAPVLDTVNSTLGGVVGDTAGGLLEPITGGLLNGGEQG
GLLAPVTGVVDSTLGGLSGGGESGGLLAPVTGIVDTLTGGSADGGVLAPVTGVVDSAL
GGLSGGSESGGLLAPVTGIVDTLTGGSADGGVLAPVTGVVDSTLGGLSGGGESGGLLA
PVTGIVGSLTGGLTGGTDGAPDTGTSSPIAPVTGLLGGLLGGSN"
gene 494708..495325
/locus_tag="PP1Y_Mpl4895"
/db_xref="GeneID:10718312"
CDS 494708..495325
/locus_tag="PP1Y_Mpl4895"
/inference="protein motif:COG:COG2200"
/inference="similar to AA sequence:UniProt:Q13FV3"
/note="KEGG: bxe:Bxe_C1172"
/codon_start=1
/transl_table=11
/product="diguanylate phosphodiesterase"
/protein_id="YP_004538375.1"
/db_xref="GI:334145165"
/db_xref="GeneID:10718312"
/translation="MLDELEADPLASISFAISAQSLSPHLHGRDAAWTELLARLRADK
GLAARLVLEIHETAPMTGFAEVQALVGQMRALGARICIAGFGSGFASTRQLLMIQPDI
VKLDSIFLHTAYQCERNRNRISHLIGLARTLSNTLVIDGVETPWHMKLAREENVQWIA
GPLQGRASTRRAWLAKPQKPRANADTGRGSANSRIPQSFGRLSPT"
misc_feature <494720..495208
/locus_tag="PP1Y_Mpl4895"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene 495493..495888
/locus_tag="PP1Y_Mpl4902"
/db_xref="GeneID:10718313"
CDS 495493..495888
/locus_tag="PP1Y_Mpl4902"
/inference="protein motif:COG:COG0784"
/inference="similar to AA sequence:UniProt:A3X9D8"
/note="KEGG: ppg:PputGB1_0383"
/codon_start=1
/transl_table=11
/product="response regulator receiver protein"
/protein_id="YP_004538376.1"
/db_xref="GI:334145166"
/db_xref="GeneID:10718313"
/translation="MERTTPTVLVIDDVAEIVEELLTLLSLREISATGAHSLDGAIGA
LENAPQIRVIACDVRLGKESGFDICDRIRTHPRLKARNFAYIFISGDPMRLNQASHLP
KHSILTKPVEPRALIELLREKLDAMRTIG"
misc_feature 495514..495855
/locus_tag="PP1Y_Mpl4902"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 495517..495864
/locus_tag="PP1Y_Mpl4902"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(495526..495531,495661..495663,495685..495687,
495757..495759,495808..495810,495817..495822)
/locus_tag="PP1Y_Mpl4902"
/note="active site"
/db_xref="CDD:29071"
misc_feature 495661..495663
/locus_tag="PP1Y_Mpl4902"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(495670..495675,495679..495687)
/locus_tag="PP1Y_Mpl4902"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 495817..495825
/locus_tag="PP1Y_Mpl4902"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 496185..497207
/locus_tag="PP1Y_Mpl4909"
/db_xref="GeneID:10718315"
CDS 496185..497207
/locus_tag="PP1Y_Mpl4909"
/EC_number="2.7.13.3"
/inference="protein motif:COG:COG0642"
/inference="similar to AA sequence:UniProt:B1M2Y5"
/note="assigned by KAAS to KEGG Orthology:K10125
two-component system, NtrC family, C4-dicarboxylate
transport sensor histidine kinase DctB"
/codon_start=1
/transl_table=11
/product="two-component system NtrC family
C4-dicarboxylate transport sensor histidine kinase DctB"
/protein_id="YP_004538377.1"
/db_xref="GI:334145167"
/db_xref="GeneID:10718315"
/translation="MPIRDVSFHPESARLSFLNASAQTAHRSSHLQIHPDDCELLKAH
SASDHASVELRLATQGLASFILVLRKNTGNARWASGLLANIREPRHLIEAVSAKSRLA
DLGERTSAIVHEIRQPLFTIAMANENLRLMLDTPGALKSRMQKSVARIADQVARAQNI
VQRTLSYVSTNGAESQFTDLPLTLANTVEFLDSFFESDSIQVRLDIPHETAMVALEQL
EVEQLFVNVLRNAADSIRKRRQAGWEGEGEIAISAKIRDDQVLCEVADNGAGLLRREA
SRCFERFYTTRKESGTGLGLYICEQFVAKAGGKIELSPREVGGARIEIRLPLIAGSDI
VASEPD"
misc_feature 496485..496685
/locus_tag="PP1Y_Mpl4909"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(496503..496505,496515..496517,496527..496529,
496536..496538,496548..496550,496557..496559,
496620..496622,496632..496634,496641..496643,
496653..496655,496662..496664,496674..496676)
/locus_tag="PP1Y_Mpl4909"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 496521..496523
/locus_tag="PP1Y_Mpl4909"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 496842..497162
/locus_tag="PP1Y_Mpl4909"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(496860..496862,496872..496874,496881..496883,
496974..496976,496980..496982,496986..496988,
496992..496997,497061..497072,497118..497120,
497124..497126,497139..497144,497148..497150)
/locus_tag="PP1Y_Mpl4909"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 496872..496874
/locus_tag="PP1Y_Mpl4909"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(496986..496988,496992..496994,497061..497063,
497067..497069)
/locus_tag="PP1Y_Mpl4909"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(497178..498170)
/locus_tag="PP1Y_Mpl4925"
/db_xref="GeneID:10718316"
CDS complement(497178..498170)
/locus_tag="PP1Y_Mpl4925"
/inference="similar to AA sequence:UniProt:A5VC46"
/note="KEGG: swi:Swit_3516"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538378.1"
/db_xref="GI:334145168"
/db_xref="GeneID:10718316"
/translation="MLIALPLLSSWEAGPGFWVLFLFMLCAGLLPARFAPVLLRIPGR
VWIFAATVCTVCFSLNLLLPGIAGVTAMLVGAFCAAFIGAGLARHLAMLDARVLAWGE
DGLMVVTRDLLLGRITSGMLHDLSQPLNVISMANGNLSYIVEHLDIADPERTQLLERI
RRISDHTEGTAAILNLFRWFGREGNPAQGQLNVRSALERAVAGTKSNVYHHDVQVTLR
GNALDHLVPGQHHALEIMAVAALLSAFGAFGKAGGERKSGAVVLSAEMSPAHVIIRVQ
CVDEAGMSLAKKSLDHATLWLVEQIAFEINGDFRCLGRGRDTTQYLIRLARDDI"
misc_feature complement(<497565..>497867)
/locus_tag="PP1Y_Mpl4925"
/note="Signal transduction histidine kinase regulating
C4-dicarboxylate transport system [Signal transduction
mechanisms]; Region: COG4191"
/db_xref="CDD:33926"
gene 499125..500045
/locus_tag="PP1Y_Mpl4951"
/db_xref="GeneID:10718317"
CDS 499125..500045
/locus_tag="PP1Y_Mpl4951"
/inference="protein motif:COG:COG3745"
/inference="similar to AA sequence:UniProt:A5VC45"
/note="assigned by KAAS to KEGG Orthology:K02279 pilus
assembly protein CpaB"
/codon_start=1
/transl_table=11
/product="pilus assembly protein CpaB"
/protein_id="YP_004538379.1"
/db_xref="GI:334145169"
/db_xref="GeneID:10718317"
/translation="MRLGTKAKLTIGIGLMTAGTFAFLGFRQLGDAATPVTATMAQTA
LQSRIEPKLVLAASTRNILTGETIDASMFRSATADPADHPNVAVPSEVVGKVATRDIR
ANTLIPRAALGQETKLAIRVPRGMRAVSIETTAEIAVAGLVRPGDRVDVQVVYPGSDA
ISGARGSGRSEAETLLQMVQVLAVGETIVGTRQPSGVEAQVSSPPPPARNVTLALSPE
QVSALTLARSTGSLTLSLRNPDDEAQIELARAVSSAPSTQPARAPVVRNLAAPAPAPR
PRAVAKPQPHAIELVVGGNKEVIYSGSGSR"
misc_feature 499284..499460
/locus_tag="PP1Y_Mpl4951"
/note="SAF domains of the flagella basal body P-ring
formation protein FlgA and the flp pilus assembly CpaB;
Region: SAF_CpaB_FlgA_like; cd11614"
/db_xref="CDD:212159"
misc_feature <499395..499850
/locus_tag="PP1Y_Mpl4951"
/note="Domains similar to fish antifreeze type III
protein; Region: SAF; cl00555"
/db_xref="CDD:212235"
gene 500042..501259
/locus_tag="PP1Y_Mpl4960"
/db_xref="GeneID:10718318"
CDS 500042..501259
/locus_tag="PP1Y_Mpl4960"
/inference="protein motif:COG:COG4964"
/inference="similar to AA sequence:UniProt:A5VC44"
/note="assigned by KAAS to KEGG Orthology:K02280 pilus
assembly protein CpaC"
/codon_start=1
/transl_table=11
/product="pilus assembly protein CpaC"
/protein_id="YP_004538380.1"
/db_xref="GI:334145170"
/db_xref="GeneID:10718318"
/translation="MKTLIASSLLGASLPLIAAPTVAWAQSPEVVAINADRTLSFPRS
IGRVEVDKENIVAIAAPTDRTLRVTGLAQGDATVSVFSGEGKLMGRTTIEVRNPSTAR
FTSSDGTARTLVAGEKVVAVDVQFAAVSTSTLRALGFSFSKLSGGLQGALITPSSLNS
ASLGSSGLSIDASAPIQNAFNLFLASPKRGISSVLSALSSNGLSQLLAQPTLMARSGE
EASFLAGGEFPVPVPQTTSGNGNTISIQYKEFGVRLSVTPYVLSKEHIILKLAPEVSE
LDYNNGVQLQGYVVPGIRRRSAETTVELGSGQSFVIAGLNYSSSSVSKDKVPFLGDIP
VLGAFFKRQESQKERQELIIVATPRLVDPVSPQDVPPLPGASGQVDPSMGKMILGNDG
VEQAIAEFGVVRR"
misc_feature 500132..501211
/locus_tag="PP1Y_Mpl4960"
/note="Flp pilus assembly protein, secretin CpaC
[Intracellular trafficking and secretion]; Region: CpaC;
COG4964"
/db_xref="CDD:34571"
misc_feature 500132..500329
/locus_tag="PP1Y_Mpl4960"
/note="Pilus formation protein N terminal region; Region:
T2SS-T3SS_pil_N; pfam13629"
/db_xref="CDD:205806"
misc_feature 500630..501127
/locus_tag="PP1Y_Mpl4960"
/note="Bacterial type II and III secretion system protein;
Region: Secretin; pfam00263"
/db_xref="CDD:201120"
gene 501261..502427
/locus_tag="PP1Y_Mpl4968"
/db_xref="GeneID:10718319"
CDS 501261..502427
/locus_tag="PP1Y_Mpl4968"
/inference="protein motif:COG:COG4963"
/inference="similar to AA sequence:UniProt:A5VC43"
/note="assigned by KAAS to KEGG Orthology:K02282 pilus
assembly protein CpaE"
/codon_start=1
/transl_table=11
/product="pilus assembly protein CpaE"
/protein_id="YP_004538381.1"
/db_xref="GI:334145171"
/db_xref="GeneID:10718319"
/translation="MGKIHLLSVDRTLAQRLTEALGERVTVEMVQSLELVDLGEPGIV
VIDHAAIATERSLGSTIAAVSDSAPGRAIVLATDELETEQVLSAIRAGAADVIARNAE
GSAIAGVLSRILNSVISTQGRPGRLTLVLGADREAAAVAATDMALAYSTTQTPTLLVD
CTLPSSTAEAYLDIKVDYGLAAAVTDIDRMDASLLADALARHEPSGLSLLTFDGGTGA
EPVGLSPNDVIGLIQLLRASCRNIVLCSGDLRNGGLLRELASQAQAIEIVCSQSIREL
DSCRRLLDRVAPDTASLARMRLLVWGHDPAILLDGRRMADVMGIEALMGVPFDRIDYY
NALNAGRPLYLGRGNASYIQAIRRVCNISEQPRGTVARFDKLRRSVLRSLERAV"
misc_feature 501468..502289
/locus_tag="PP1Y_Mpl4968"
/note="Flp pilus assembly protein, ATPase CpaE
[Intracellular trafficking and secretion]; Region: CpaE;
COG4963"
/db_xref="CDD:34570"
gene 502424..503767
/locus_tag="PP1Y_Mpl4983"
/db_xref="GeneID:10718320"
CDS 502424..503767
/locus_tag="PP1Y_Mpl4983"
/inference="protein motif:COG:COG4962"
/inference="similar to AA sequence:UniProt:A5VC42"
/note="assigned by KAAS to KEGG Orthology:K02283 pilus
assembly protein CpaF"
/codon_start=1
/transl_table=11
/product="pilus assembly protein CpaF"
/protein_id="YP_004538382.1"
/db_xref="GI:334145172"
/db_xref="GeneID:10718320"
/translation="MSLLTTDTVSEAAPQSPMRSAITQPSSKRMSDTYQAVKALTCQQ
VIEHLEAQGNTAEGLEQRALRSEIEQVINSRSRRGQLALNSAERLLLIEDVEDELVGL
GPLAPLLRDRTIDDIIVNGAQTIYVERMGLLERIETRFRDDTHLMNIIQRIVGPIGRR
VDEATPYVDARLPDGSRVNIIIPPIALDGPTLSIRKFRMQALTMADCVASETMSQPMA
DFLDAAVRSRLNLVICGGTGAGKSTLLNVLSGCIGQGERLVTIEDAAELQLRQEHVVR
LETRPPNVDGNREVSARDLMRNALRMRPDRIILGEVRGTEVVEMLQAMSTGHNGSMAT
LHGNSPRDALARLEMLMGFAGLQNDMRAIRRFVANSIHVIVNIQRLSNGRRRITSITE
VTGVEGESYTLNELFRFEESPPMSGMGDFRITSPRPYHGPSLRDYAPMVRGAETW"
misc_feature 502616..503659
/locus_tag="PP1Y_Mpl4983"
/note="Flp pilus assembly protein, ATPase CpaF
[Intracellular trafficking and secretion]; Region: CpaF;
COG4962"
/db_xref="CDD:34569"
misc_feature 503033..503590
/locus_tag="PP1Y_Mpl4983"
/note="Type IV secretory pathway component VirB11, and
related ATPases. The homohexamer, VirB11 is one of eleven
Vir proteins, which are required for T-pilus biogenesis
and virulence in the transfer of T-DNA from the Ti
(tumor-inducing) plasmid of bacterial to...; Region:
VirB11-like_ATPase; cd01130"
/db_xref="CDD:29996"
misc_feature order(503042..503044,503135..503152,503573..503575)
/locus_tag="PP1Y_Mpl4983"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29996"
misc_feature order(503126..503131,503141..503149)
/locus_tag="PP1Y_Mpl4983"
/note="Walker A motif; other site"
/db_xref="CDD:29996"
misc_feature order(503132..503137,503192..503194,503216..503218,
503237..503248,503252..503257,503324..503332,
503336..503338,503375..503377,503387..503389,
503396..503401,503429..503437,503447..503449,
503456..503458,503558..503560)
/locus_tag="PP1Y_Mpl4983"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:29996"
misc_feature 503339..503356
/locus_tag="PP1Y_Mpl4983"
/note="Walker B motif; other site"
/db_xref="CDD:29996"
gene 503803..504663
/locus_tag="PP1Y_Mpl4996"
/db_xref="GeneID:10718321"
CDS 503803..504663
/locus_tag="PP1Y_Mpl4996"
/inference="protein motif:COG:COG4965"
/inference="similar to AA sequence:UniProt:A5VC41"
/note="assigned by KAAS to KEGG Orthology:K12510 tight
adherence protein B"
/codon_start=1
/transl_table=11
/product="tight adherence protein B"
/protein_id="YP_004538383.1"
/db_xref="GI:334145173"
/db_xref="GeneID:10718321"
/translation="MAALAWYLVGERRRSLADIDRRLAQLSDANTPSPRQSAPLTVPE
RLAPLLAQAQLEVTASTIRTIGVLALLTGLGTLALFGPAVTLLLLIGVPFLAHAWVSG
RARKRIDALTEALPHYIDGIRQLQAVGNSLSQALERALAEAPDVVQSYFSQTARKLEM
GAPVGETMQQLADRLRVAEISMLAAAIKTNLRYGGSITSALRNLSNILRERLRIKREL
LAATSEAKVSSRVLIAMPLIAMALLVAMNPSYIDFFVQDARGHTMVLVALVLEFLGIF
VMRRTMRLDF"
misc_feature 503806..504660
/locus_tag="PP1Y_Mpl4996"
/note="Flp pilus assembly protein TadB [Intracellular
trafficking and secretion]; Region: TadB; COG4965"
/db_xref="CDD:34572"
misc_feature <504049..504420
/locus_tag="PP1Y_Mpl4996"
/note="Flp pilus assembly protein TadC [Cell motility and
secretion / Intracellular trafficking and secretion];
Region: TadC; COG2064"
/db_xref="CDD:32247"
gene 504663..505556
/locus_tag="PP1Y_Mpl5004"
/db_xref="GeneID:10718322"
CDS 504663..505556
/locus_tag="PP1Y_Mpl5004"
/inference="protein motif:COG:COG2064"
/inference="similar to AA sequence:UniProt:A5VC40"
/note="assigned by KAAS to KEGG Orthology:K12511 tight
adherence protein C"
/codon_start=1
/transl_table=11
/product="tight adherence protein C"
/protein_id="YP_004538384.1"
/db_xref="GI:334145174"
/db_xref="GeneID:10718322"
/translation="MVQASAILLFVLAAASVAFAGCGARMLLADNRLRARLSGRPQRP
GQPGQTSLRLPRLFMARGRDREEIEKKLRSAGMFGSGALVTFLWLRLAATAGMALAVM
LYGLIAAGNPFAHVFPLFALPGLTYIGAKYILQMRATDRERTLTAEFPFLLDLMLMML
ESGISLDQCFRAIARDEQVAVPHHARLLAMLVDDLDRGQDYQNALDRWAARVSVAGAR
ELAALFRQSLFQGMELVPALREFIIEFSQRRVTRAREAIGTITVRMVILMLVFFMPAL
FIVLAAPPVVAIFDTLRSTAP"
misc_feature 504756..505538
/locus_tag="PP1Y_Mpl5004"
/note="Flp pilus assembly protein TadC [Cell motility and
secretion / Intracellular trafficking and secretion];
Region: TadC; COG2064"
/db_xref="CDD:32247"
gene 505553..506257
/locus_tag="PP1Y_Mpl5012"
/db_xref="GeneID:10718323"
CDS 505553..506257
/locus_tag="PP1Y_Mpl5012"
/inference="protein motif:COG:COG5010"
/inference="similar to AA sequence:UniProt:A5VC39"
/note="KEGG: swi:Swit_3509"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538385.1"
/db_xref="GI:334145175"
/db_xref="GeneID:10718323"
/translation="MSNLLPARISLAVALAVLAPTLRAAPAQARATDVQEAGSTKSLY
LMLIRQARSDGRPRAALAYLDDFDRRHPDDLEARILRVNCLLDLGQTGEASAEAGKLP
TDDRSGEVQQVRGHVFAAEKHWPDAIAQYEQALLLKPADPLTSNALGYARLQSGQFEA
ALENLRAAHDLAPDDTVIRNNLLLALTLADHAREAKYLFETIGDETVRSRIRRAVADE
VNRLVALATVKVEAML"
misc_feature 505892..506155
/locus_tag="PP1Y_Mpl5012"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature 505892..506080
/locus_tag="PP1Y_Mpl5012"
/note="Tetratricopeptide repeat; Region: TPR_16;
pfam13432"
/db_xref="CDD:205610"
misc_feature order(505895..505897,505931..505933,505943..505945,
505952..505954,505997..505999,506033..506035,
506045..506047,506054..506056,506099..506101,
506135..506137,506147..506149)
/locus_tag="PP1Y_Mpl5012"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature order(505898..505903,505988..505993,505997..506002,
506009..506014,506090..506095,506102..506107,
506114..506119)
/locus_tag="PP1Y_Mpl5012"
/note="binding surface"
/db_xref="CDD:29151"
gene 506311..508020
/locus_tag="PP1Y_Mpl5019"
/db_xref="GeneID:10718325"
CDS 506311..508020
/locus_tag="PP1Y_Mpl5019"
/inference="protein motif:COG:COG4655"
/inference="similar to AA sequence:UniProt:A5VC37"
/note="KEGG: swi:Swit_3507"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538386.1"
/db_xref="GI:334145176"
/db_xref="GeneID:10718325"
/translation="MLAVLGVSLLAAAGLALDVALYYVGERDLRAATEAAALAASMNP
GNAEERARDYLTRNGYDGDVLQSVEVGRYCPDVSVDPNQRFDPSFTRCPGNGVANAVR
LHTKRASRRFLTGVFDEAVIPDMEVTASAARIDEAGIGITSGLLTVTNPLVNVVNDLL
GALLGIKLRLNQSDIEGMMGANVDAGLFFDALAKRSGSTGTYGDLVAGTYGIKDIVMS
AADATSNIAAKLGLHSLGSQVTNSYQVPLSDLFGLGVWKNMPVGHADSPPSLRAGINA
YQLVTFAIQAGPGVIDLSDAVSLAVPGSIVKIGAIATGPADRPRFSFGPAGETSVGTS
LLRLQILLGLGDINLLGFPISESVPVLIDVAAAHAEISQIECTDTAEQGRDTRVNVTA
SSGLVNAYIGKAPANALTRPVPPITADDISQVRLLNVLNLVTVDARAVAQPVFGKSST
LTFGPGGNGTIGSPDSPGSPASVGNGAQVGPLISSLVDGLMAPDGLQIELLGLCLPIV
CQGSEDTLRQTLLGAITTPLSGLVGNTADPLLDFVLEALGIQLGHATVWATGARCGVP
VLI"
misc_feature 506377..508017
/locus_tag="PP1Y_Mpl5019"
/note="Predicted membrane protein [Function unknown];
Region: COG4655"
/db_xref="CDD:34274"
misc_feature 506449..506703
/locus_tag="PP1Y_Mpl5019"
/note="Putative Tad-like Flp pilus-assembly; Region:
Tad_C; pfam09977"
/db_xref="CDD:204362"
gene 508099..508278
/locus_tag="PP1Y_Mpl5038"
/db_xref="GeneID:10718326"
CDS 508099..508278
/locus_tag="PP1Y_Mpl5038"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538387.1"
/db_xref="GI:334145177"
/db_xref="GeneID:10718326"
/translation="MIDYTRYLIRSLIRDERGLTAVEYAVLGGIVVAGIVAIGSGFQD
NLATAFSNLFASATS"
misc_feature 508120..508275
/locus_tag="PP1Y_Mpl5038"
/note="Flp/Fap pilin component; Region: Flp_Fap; cl01585"
/db_xref="CDD:242591"
gene 508295..508723
/locus_tag="PP1Y_Mpl5039"
/db_xref="GeneID:10718327"
CDS 508295..508723
/locus_tag="PP1Y_Mpl5039"
/inference="protein motif:COG:COG4961"
/inference="similar to AA sequence:UniProt:A5VC35"
/note="KEGG: swi:Swit_3505"
/codon_start=1
/transl_table=11
/product="TadE family protein"
/protein_id="YP_004538388.1"
/db_xref="GI:334145178"
/db_xref="GeneID:10718327"
/translation="MDDLLHRLSRCRAGMAALEFVFLAPALLMLVFSIIVYSLYFAAY
FGVRQAASEGARTALAGLSSDERISLATTRAQEIVDSYGNLLGSGKDAVITTSTDGAN
AFMVTVSYDISDSPIMRYASILPLPATDMKASATVTNGGY"
misc_feature 508304..>508495
/locus_tag="PP1Y_Mpl5039"
/note="Flp pilus assembly protein TadG [Intracellular
trafficking and secretion]; Region: TadG; COG4961"
/db_xref="CDD:34568"
misc_feature 508334..508462
/locus_tag="PP1Y_Mpl5039"
/note="TadE-like protein; Region: TadE; pfam07811"
/db_xref="CDD:203769"
gene 508724..509185
/locus_tag="PP1Y_Mpl5047"
/db_xref="GeneID:10718328"
CDS 508724..509185
/locus_tag="PP1Y_Mpl5047"
/inference="ab initio prediction:grc:1.0"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538389.1"
/db_xref="GI:334145179"
/db_xref="GeneID:10718328"
/translation="MAAMDFFGTAALVLLLLPVLVLPWGGKGVPALHFAIIAGAGLAA
AWLTGGAAALLASALSGAVSMLSIAVAVTALKSWQGVQILTGSHIQLLATGAIWLGPV
GSLLMLSFSSIFLFSSAFINKANGQLRRPDFFAIGVSAILIVQTGQIFTKH"
gene 509224..510219
/locus_tag="PP1Y_Mpl5052"
/db_xref="GeneID:10718329"
CDS 509224..510219
/locus_tag="PP1Y_Mpl5052"
/inference="protein motif:COG:COG2204"
/inference="similar to AA sequence:UniProt:A5VC34"
/note="KEGG: swi:Swit_3504"
/codon_start=1
/transl_table=11
/product="response regulator receiver protein"
/protein_id="YP_004538390.1"
/db_xref="GI:334145180"
/db_xref="GeneID:10718329"
/translation="MSQNWRLKLGSLFNPNQIEANEETELASLVQDKHSGSVLIVDDD
PDWGEECSYALRAMGYEPLHALTPQDALRLYLDSDTTIAIIDYNMPGKDGISLIHELA
RHAQTLGRQLHIVMATGYATKDIAVDAMRASVSDFLEKPIHPSDLRRALQRISGLQDN
PAARETLLTKMSSLSSELNRLAQLIHEPQPNGTGSLKPMLGHSNNGLQFKGPAIDRSV
LCDFIRDQLRKESKRRGIGGGALFGDPTWEMLLDLLLAKIEGRTVSVSSACIASGAPM
STALRLVRRLVTEDVLCRIPDEKDKRRHFLIINPKFEQPLIDYLSDQISLMNPGV"
misc_feature 509335..509679
/locus_tag="PP1Y_Mpl5052"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 509338..509685
/locus_tag="PP1Y_Mpl5052"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(509347..509352,509479..509481,509503..509505,
509575..509577,509632..509634,509641..509646)
/locus_tag="PP1Y_Mpl5052"
/note="active site"
/db_xref="CDD:29071"
misc_feature 509479..509481
/locus_tag="PP1Y_Mpl5052"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(509488..509493,509497..509505)
/locus_tag="PP1Y_Mpl5052"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 509641..509649
/locus_tag="PP1Y_Mpl5052"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(510263..510691)
/locus_tag="PP1Y_Mpl5067"
/db_xref="GeneID:10718331"
CDS complement(510263..510691)
/locus_tag="PP1Y_Mpl5067"
/inference="similar to AA sequence:UniProt:Q1GU25"
/note="KEGG: sal:Sala_1131"
/codon_start=1
/transl_table=11
/product="peptidase A24A, prepilin type IV"
/protein_id="YP_004538391.1"
/db_xref="GI:334145181"
/db_xref="GeneID:10718331"
/translation="MIDVRQRRIPNEISLAVALLAIPFCYGAAGGPGLLSLLRHLSVP
LLLAVPMSILFALRILGGGDVKLILASSLWVPPEKIATLAMIVILLGGLVAVLMQLLD
MIFQAVKPESVPYGLPIAAGVLVLQVPTLRQIATILGTGW"
gene complement(510825..511385)
/locus_tag="PP1Y_Mpl5072"
/db_xref="GeneID:10718332"
CDS complement(510825..511385)
/locus_tag="PP1Y_Mpl5072"
/inference="protein motif:COG:COG3128"
/inference="similar to AA sequence:UniProt:A5VC31"
/note="KEGG: swi:Swit_3501"
/codon_start=1
/transl_table=11
/product="2OG-Fe(II) oxygenase"
/protein_id="YP_004538392.1"
/db_xref="GI:334145182"
/db_xref="GeneID:10718332"
/translation="MKNVWEVWPTALTKAECDAITKRALSYPQQDATVGFADQRRANS
GHRTSQIRWLDANREKDIVSRIMTFVSSSNRTNFGADIVAPFDLQFTQYNATNAGHYD
WHQDVWLESPRPFDRKLSVVVQLSEPDEYNGGEFEFFGLQNPGATFANRGSMLIFPSF
LQHRVLPVVNGRRQSLVTWVEGPKWR"
misc_feature complement(510846..511349)
/locus_tag="PP1Y_Mpl5072"
/note="Prolyl 4-hydroxylase alpha subunit homologues;
Region: P4Hc; smart00702"
/db_xref="CDD:197834"
misc_feature complement(510843..511124)
/locus_tag="PP1Y_Mpl5072"
/note="2OG-Fe(II) oxygenase superfamily; Region:
2OG-FeII_Oxy_3; pfam13640"
/db_xref="CDD:205817"
gene complement(511468..513150)
/locus_tag="PP1Y_Mpl5080"
/db_xref="GeneID:10718333"
CDS complement(511468..513150)
/locus_tag="PP1Y_Mpl5080"
/inference="protein motif:COG:COG2831"
/inference="similar to AA sequence:UniProt:A5VC32"
/note="KEGG: swi:Swit_3502"
/codon_start=1
/transl_table=11
/product="polypeptide-transport-associated
domain-containing protein"
/protein_id="YP_004538393.1"
/db_xref="GI:334145183"
/db_xref="GeneID:10718333"
/translation="MKLARAIIGFAVAVATCALTTGANAQDAGQVSTQFNPAANIDRD
RMDRIEPNIPERSNAPEAPRPSIEVAAPTKPSAVAAIELTKVKFEGATLAQDVLEGAV
APYLGSRLTRPNLQKVANAVSQAYATSDIAFYSVSIPTQVPRGGVLIVRVLEGRIGNY
TIEHESRSTPTRLIAAHMRRLMQETPTHKSSIERTLSLLRDIPGQTIEAKLKSAGRPG
EVTMTLNVRRKQVEVTLDVNNSGVTNVTSGVQSQLGIAVNGLIREGDTTRFSGYIPFT
PDRYQFYSASHATPLGSNGTTLAVNGAYVRTRTRSADILGEAKQVGLSLSHRLIRSYH
KNLVISASLDGTNSQHYFLDTAFGGFRTRAIRIGATWSAVGKTGGYGVSGTVSQGLDA
LGAKEIAGFSEAKFRKVNIQLTAVKDLGSGLSGKVTSRAQYTQDKLPTTERFSLGGEG
AGMAYRVGTITADKAIAAGLEVGWKLKSGKGLFNNFQIFAYTDGALGKSSSRQSIGIA
SKKYSLASAGGGIRISPIKGWTAQVQIAVPVKSPRDFYEKKPRFFFSVTRRV"
misc_feature complement(511480..513033)
/locus_tag="PP1Y_Mpl5080"
/note="Hemolysin activation/secretion protein
[Intracellular trafficking and secretion]; Region: FhaC;
COG2831"
/db_xref="CDD:32659"
misc_feature complement(512686..512910)
/locus_tag="PP1Y_Mpl5080"
/note="Surface antigen variable number repeat; Region:
Surf_Ag_VNR; cl10520"
/db_xref="CDD:213120"
misc_feature complement(511483..512319)
/locus_tag="PP1Y_Mpl5080"
/note="Surface antigen; Region: Bac_surface_Ag; cl03097"
/db_xref="CDD:155280"
gene complement(513635..514939)
/locus_tag="PP1Y_Mpl5099"
/db_xref="GeneID:10718334"
CDS complement(513635..514939)
/locus_tag="PP1Y_Mpl5099"
/inference="similar to AA sequence:UniProt:A4XE01"
/note="KEGG: nar:Saro_3919"
/codon_start=1
/transl_table=11
/product="plasmid encoded RepA protein"
/protein_id="YP_004538394.1"
/db_xref="GI:334145184"
/db_xref="GeneID:10718334"
/translation="MSGDTSKPIGHQYALAMLDGGEDRVRSLAKTAGTQLTMDAFLRV
QDEEPVPAFLHSALCAMSLPTKRPKDETQPILREDGKYALAINPRPVLQTVDGKPVLR
SLGVPYGAYPRVALIYLLSQAVTKRSRDVYLGRNFTEWMRRLGYQTVSYGPRGTANRM
REQVDRLLACEWQIRWDGTDAGDNAFAVRDVKISNEYAGSLEKNGAFAREIRMSEAFY
SHLIEHAVPLNEIAIRELKGTPTALDLYTYLAYRLPRITSDRGQTISWDQLARHLGNS
ADSKRFRQTVRETMQLVSAVYPNANVDLSGRKVVLNPSPAPLERKLVGPHLRLVGAAA
AEKAPRSSVSLERKFRRETPQLTEELRAFPEGSLSFGTREAAFRKIGLEKGQPWSVDT
MADAFRAGFPGIGKLRTDTEWLRVWEAFVVSYAKRRSQDGAE"
misc_feature complement(514136..514624)
/locus_tag="PP1Y_Mpl5099"
/note="Plasmid encoded RepA protein; Region: RepA_C;
pfam04796"
/db_xref="CDD:113562"
gene 515490..516695
/locus_tag="PP1Y_Mpl5117"
/db_xref="GeneID:10718335"
CDS 515490..516695
/locus_tag="PP1Y_Mpl5117"
/inference="protein motif:COG:COG1192"
/inference="similar to AA sequence:UniProt:A4XE00"
/note="KEGG: nar:Saro_3918"
/codon_start=1
/transl_table=11
/product="cobyrinic acid a,c-diamide synthase"
/protein_id="YP_004538395.1"
/db_xref="GI:334145185"
/db_xref="GeneID:10718335"
/translation="MATHPSLEIQPDDLTNDGLGLLHRKALTILKRIRDGALDPETGH
KVGPSFPISKAASLVGRTASAIREAERDGRLPPRDRTASGHRVQYTLQELDHMREVFG
TRPWREPTDTPAIISVSNFKGGVGKSTIALHLAQHFAIRGYRVLFIDCDSQASSTMMF
GYRPDVDLGEDDTLYGHFHNPELLGVRSIIRKTHFFGLDLIPANLKLYNLEYEIAGYL
AQHQSFDIIDLIAQAIDSVVDDYDIVIMDPPPALGMVSMAVLQAANAMVIPMPPSVID
FASTVSFIDMARTTMHQLEKLGGRVKPAYNFIRLVGSRVDESKSMHREILSMMRQVFG
GSMINSVLKTSAEIDNASSRMKTVFELDRPVTSHEVHNRCVKFLGDVCHDIEQDVLRS
WESRAEQVS"
misc_feature 515634..516668
/locus_tag="PP1Y_Mpl5117"
/note="plasmid partitioning protein RepA; Region:
partition_RepA; TIGR03453"
/db_xref="CDD:211820"
misc_feature 515637..>515789
/locus_tag="PP1Y_Mpl5117"
/note="Helix-Turn-Helix DNA binding domain of
transcription regulators from the MerR superfamily;
Region: HTH_MerR-SF; cl02600"
/db_xref="CDD:207663"
misc_feature order(515640..515648,515688..515690,515739..515747)
/locus_tag="PP1Y_Mpl5117"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:133389"
misc_feature 515832..>515948
/locus_tag="PP1Y_Mpl5117"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:73302"
misc_feature 515853..515873
/locus_tag="PP1Y_Mpl5117"
/note="P-loop; other site"
/db_xref="CDD:73302"
misc_feature 515871..515873
/locus_tag="PP1Y_Mpl5117"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:73302"
gene 516867..517844
/locus_tag="PP1Y_Mpl5130"
/db_xref="GeneID:10718337"
CDS 516867..517844
/locus_tag="PP1Y_Mpl5130"
/inference="protein motif:COG:COG1475"
/inference="similar to AA sequence:UniProt:A4XDZ9"
/note="assigned by KAAS to KEGG Orthology:K03497
chromosome partitioning protein, ParB family"
/codon_start=1
/transl_table=11
/product="ParB family chromosome partitioning protein"
/protein_id="YP_004538396.1"
/db_xref="GI:334145186"
/db_xref="GeneID:10718337"
/translation="MAKGNRGFGSSLTEGLDDSELDVSAPAESIMASRSQTLARLASG
KVVTDRTEWVDPARCRPWRLHNRDIDHLNEETCRDLIDAFLSAKKQRIPAIVRKLHED
PEYDYEIIAGVRRWWTVQWLREHHHPEYEYLVTIQHVSDEEAFRVSDIENRSRKDISD
WERANEYLRALGEFYDGSQSEMAEHLKISRSWLTRLLDVARLPSEIVNVFPDTHDITV
RVARDLKPLTGDQRALGLMVAEGKAIIAEREDLGVKLTGPEVAKRLVKATVATSKKSA
QEELIKTRKGKPMLRYSRPARGGLNLKVLPRSGATADEVLEAIRGLLDA"
misc_feature 517020..517325
/locus_tag="PP1Y_Mpl5130"
/note="ParB-like nuclease domain; Region: ParBc;
pfam02195"
/db_xref="CDD:145381"
misc_feature 517026..517568
/locus_tag="PP1Y_Mpl5130"
/note="ParB-like partition proteins; Region: parB_part;
TIGR00180"
/db_xref="CDD:161748"
gene complement(518131..519318)
/locus_tag="PP1Y_Mpl5143"
/db_xref="GeneID:10718339"
CDS complement(518131..519318)
/locus_tag="PP1Y_Mpl5143"
/inference="similar to AA sequence:UniProt:Q1N8B6"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538397.1"
/db_xref="GI:334145187"
/db_xref="GeneID:10718339"
/translation="MPHFDGMPLERDPAVLSALYLGRIQSAVSQANDGAMIVLAGRLI
RESLITALRQEGHAFTDERFFDWFAGLSTLSDVSAHKLRPPRALCQAILTELRHNPWH
HLAVASQRIGEAFLAPIDLDRNEGHEDANALLAEARAVITAIEPCNTDLPFSPVAALF
SAARQSLHFARQERGIELIKGPRSAVAVEVGEQAHSRWALDILAGGYLAPRHGLPFAA
PLPGLLTLTFESSAAVDQDMPFTPSPSGRDRESLTALCNALWSLDRFIQDAIRDAGCI
ADKLQSCRSNGRAGDVAGYLAGFGTLRGVQIEKVIGASRLGVRTIMATLAQAGLVEGE
TSRNAATMHRFAPREVVHAQAVQDQEDFAFSSQAIDEFQSSMDAIDELLRRSSPRPSE
GES"
gene complement(519431..520318)
/locus_tag="PP1Y_Mpl5158"
/db_xref="GeneID:10718340"
CDS complement(519431..520318)
/locus_tag="PP1Y_Mpl5158"
/inference="protein motif:COG:COG0583"
/inference="similar to AA sequence:UniProt:A5V8A3"
/note="KEGG: hba:Hbal_1605"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_004538398.1"
/db_xref="GI:334145188"
/db_xref="GeneID:10718340"
/translation="MLDRYLLRYFLAVVDQGNFSRAAGHCNVSQPTLSVGIAKLERIL
GHALFVRSNQRVELTDAGSRLLAHARRIEREFNLAQQAMEPASALPSLRLGVLSTIPA
RAIASAIATARPQEAYRFELVFGSERELTGQLAKGRIDLALALVERGADRFLERSILS
EGYALAMAQGHPLARAETIEAGQLVHEVMIVRRHCEALSDISRHFTERGVRPHFSLRS
TNDERVLEMVAAGLGLTVMPDCYAHDGVARPRLAGFPDKRTIGWMAAHHAEHLLAAPG
EIIVTIESELRALREKAAG"
misc_feature complement(520133..520303)
/locus_tag="PP1Y_Mpl5158"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(519536..519964)
/locus_tag="PP1Y_Mpl5158"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cd05466"
/db_xref="CDD:176102"
misc_feature complement(order(519629..519634,519638..519643,
519659..519676,519947..519964))
/locus_tag="PP1Y_Mpl5158"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 520438..521583
/locus_tag="PP1Y_Mpl5168"
/db_xref="GeneID:10718341"
CDS 520438..521583
/locus_tag="PP1Y_Mpl5168"
/EC_number="1.3.99.10"
/inference="protein motif:COG:COG1960"
/inference="similar to AA sequence:UniProt:Q2N792"
/note="assigned by KAAS to KEGG Orthology:K00253
isovaleryl-CoA dehydrogenase"
/codon_start=1
/transl_table=11
/product="isovaleryl-CoA dehydrogenase"
/protein_id="YP_004538399.1"
/db_xref="GI:334145189"
/db_xref="GeneID:10718341"
/translation="MTDFDFALGETADMIRESTMRFATDRIAPLAAEIDEKDWFPREL
WPQMGELGLHGITVEEQWGGLGLGYLEHVVAQEEVARASASIGLSYGAHSNLCVNQIR
RWGNEEQKARYLPKLISGEHVGSLAMSEAGAGSDVVSMKLKAEKKGDRYVLNGTKFWI
TNATYADTLVVYAKTGEGSRGITTFLIEKDFKGFSIGQKIDKVGMRGSPTAELVFDDC
EVPEENVMGPVGGGVGVLMSGLDYERTVLSGIQLGIMQACLDVVLPYVRERKQFGKPI
GAFQLMQAKIADMYVALNSARAYVYAVARACDAGKTTRFDAAGAILLASENAMKTALE
AVQALGGAGYTKDWPVERLMRDAKLLDIGAGTNEIRRMLIGRELIGA"
misc_feature 520450..521571
/locus_tag="PP1Y_Mpl5168"
/note="isovaleryl-CoA dehydrogenase; Region: PLN02519"
/db_xref="CDD:178134"
misc_feature 520456..521574
/locus_tag="PP1Y_Mpl5168"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:209100"
misc_feature order(520723..520725,520813..520815,520819..520821,
520912..520914,520918..520920,521521..521529,
521533..521535,521539..521541)
/locus_tag="PP1Y_Mpl5168"
/note="active site"
/db_xref="CDD:173838"
gene 521628..522476
/locus_tag="PP1Y_Mpl5178"
/db_xref="GeneID:10718342"
CDS 521628..522476
/locus_tag="PP1Y_Mpl5178"
/EC_number="4.1.3.6"
/inference="protein motif:COG:COG2301"
/inference="similar to AA sequence:UniProt:A5VBB8"
/note="assigned by KAAS to KEGG Orthology:K01644 citrate
lyase subunit beta"
/codon_start=1
/transl_table=11
/product="citrate lyase subunit beta"
/protein_id="YP_004538400.1"
/db_xref="GI:334145190"
/db_xref="GeneID:10718342"
/translation="MKLRSLLFVPADRPERFAKAAASGADALILDLEDSVAPERKRAG
REAIAAWLANERKVPTFVRVNPLDGDLTTDDLGAILPGRPDGIVLPKSEGSQCVRRLV
ALMEAQTGGRCALPPILPIATETPAAIFQLGTYREVTERLAGLTWGAEDLPAAIGAAT
SREEDGSYTAPYEMVRSLCLFGAHAAQTLALETVFPRIDAPDALAAYVARARRDGFTG
MMAVHPAQVETINHGFTPSEAEVAQARTIVEAFAANPGVGALKLDGKMIDRPHLVQAR
RILDQA"
misc_feature 521640..522473
/locus_tag="PP1Y_Mpl5178"
/note="Citrate lyase beta subunit [Carbohydrate transport
and metabolism]; Region: CitE; COG2301"
/db_xref="CDD:32456"
gene complement(522506..523165)
/locus_tag="PP1Y_Mpl5187"
/db_xref="GeneID:10718343"
CDS complement(522506..523165)
/locus_tag="PP1Y_Mpl5187"
/inference="protein motif:COG:COG1309"
/inference="similar to AA sequence:UniProt:Q89NE3"
/note="KEGG: rme:Rmet_3914"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_004538401.1"
/db_xref="GI:334145191"
/db_xref="GeneID:10718343"
/translation="MADGEATFDIEENLTKVGVIPTLQARSRTLRNRLIQEALRIARK
VPFDDVSIHEICAAAGCSTGAFYSRFPDKITLFKAVMIFAAAESGPMLESMVRSLPFE
EILPKLMAKQVERFQKQETFFRSAFKVSLDSPEAWEPFRRNANSLAKAYLERVQSHPD
IDQERVKPDRVLFAFQVMYGVLNNTVINRPGPFLIESEDFPLLLRESMLAAMHLPLRT
P"
misc_feature complement(522575..523105)
/locus_tag="PP1Y_Mpl5187"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature complement(522926..523066)
/locus_tag="PP1Y_Mpl5187"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 523371..524312
/locus_tag="PP1Y_Mpl5196"
/db_xref="GeneID:10718345"
CDS 523371..524312
/locus_tag="PP1Y_Mpl5196"
/EC_number="3.-.-.-"
/inference="protein motif:COG:COG1234"
/inference="similar to AA sequence:UniProt:A5E8L3"
/note="KEGG: bbt:BBta_0210"
/codon_start=1
/transl_table=11
/product="putative hydrolase"
/protein_id="YP_004538402.1"
/db_xref="GI:334145192"
/db_xref="GeneID:10718345"
/translation="MALTASGMIAAPVMSLAATAGGPETKTAKGAKLVLLGTKGGPRV
GGKRSNPANALVVDGNVYVIDTGMGVTSQIVKAGLNLSDIRAIFISHMHSDHELEFGN
LVYNIWAAGVLRRPIDAYGPAGMEALAADYWHLNREDIRIRMADEGKPHPGTFLRPHD
FRQSQGTVMSADGVTVTAFTTPHPPMENLAYRFETPYGSVVYSGDTAYNPALADFARG
ADVLVHEVLYVPGVDALVKRANGSAAFRNHILESHTAAEQVGMIAKRAGVKKLVLSHF
VPGDMDWITDDMWRDEAAKHYKGEIVVGSDLMEIPLG"
misc_feature 523464..524309
/locus_tag="PP1Y_Mpl5196"
/note="Metal-dependent hydrolases of the beta-lactamase
superfamily III [General function prediction only];
Region: ElaC; COG1234"
/db_xref="CDD:31427"
gene 524384..525895
/locus_tag="PP1Y_Mpl5207"
/db_xref="GeneID:10718346"
CDS 524384..525895
/locus_tag="PP1Y_Mpl5207"
/inference="similar to AA sequence:UniProt:Q3BVM8"
/note="KEGG: xcv:XCV1454"
/codon_start=1
/transl_table=11
/product="putative secreted protein"
/protein_id="YP_004538403.1"
/db_xref="GI:334145193"
/db_xref="GeneID:10718346"
/translation="MFGLTVPGCAFAATAGAERQGPVQPIAEATPSNARAAAAPSARD
PLKSPYPAQADGQGPRTGPNYTMLRGAEDWRFLANPKAKRDWASPLKYIALDDEGYIS
LSLNGDQRTSVSVSTRPLLSDSTDRIEILSRTTLGADLRIGPAVRVYGELASGHISGK
NETRHLANFENDLVVQQLFAEVRAPVASGVARVTVGRQEFFDGPRFIISPRDNPNIRV
SMNGARLSMDWKRFRFSAFYFEPTDPGNGFLDDGIGNGETLTGAYGSFLLTGEGDAGK
GRIFFDPFYYNFEDTDRKLGPISGKDRRETYGARLWGSRGNLSFDWAAIKQDGRFAGR
RVDAWAVSTNQSLGLGKGKSAPRLGFHADYASGGGTYDGAGKVGSFNFLYNATVIFSD
DNFVGAINTMGFAPTISFSPTRRLQVSAEWGSYWRPNENDAAYRGNAQAYAGTQNVAG
KHVANIARLKANWSLNPHVALAGMVNYADAGKVLRRAGYGDNLFVKTMLTLRF"
misc_feature 525317..525799
/locus_tag="PP1Y_Mpl5207"
/note="Domain of unknown function (DUF4104); Region:
DUF4104; pfam13372"
/db_xref="CDD:205551"
gene 525927..527225
/locus_tag="PP1Y_Mpl5223"
/db_xref="GeneID:10718347"
CDS 525927..527225
/locus_tag="PP1Y_Mpl5223"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:Q3KHV0"
/note="KEGG: pfo:Pfl01_0913"
/codon_start=1
/transl_table=11
/product="general substrate transporter"
/protein_id="YP_004538404.1"
/db_xref="GI:334145194"
/db_xref="GeneID:10718347"
/translation="MPAGVLGRLPSAGLPAGEVYGVILSKFRGVQLILGCAMALFAGG
IAFQTLSFSMPGLVHDWNLAESLIGPLLSAAIFGLLLGYLFIAPLADRLGPRAVVCPA
MLGLAASMGICFVAPNVEILILGRVLVGIAIGAAFPCAVSAASQHGPQRWRGAQVVGI
YVAYSMGFLAAGLASAWLVPLYGWRAAWGLSLPAALIAAALLWHALPARLPHAPQSRP
LASLFASDLRQGTLLFWLMCSIGLGLFYAVQGWLPLLAAREGMTYADAVTAANLFTVG
NAVGAVPMIWWADRMGPFRALVCVSAIGLAGIALLGLSAGEGGKPFLLAAVLAGIGIG
GGQKGMIAAASQFYPSQLRSTGIGWALGLGRFGALCGPLLIGFVTMHDVAGSTALLSL
ALPVPAIMLAAFWLDRTYGRIDRAADQQSPQQAMPNDQVR"
misc_feature 526020..527060
/locus_tag="PP1Y_Mpl5223"
/note="benzoate transport; Region: 2A0115; TIGR00895"
/db_xref="CDD:162095"
misc_feature 526023..>526826
/locus_tag="PP1Y_Mpl5223"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(526065..526067,526074..526082,526086..526091,
526140..526142,526149..526154,526161..526163,
526173..526178,526182..526187,526323..526328,
526335..526340,526347..526352,526359..526361,
526395..526400,526407..526412,526428..526430,
526650..526652,526659..526664,526671..526676,
526683..526685,526722..526724,526734..526736,
526746..526748,526755..526757,526767..526769)
/locus_tag="PP1Y_Mpl5223"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 527225..528523
/locus_tag="PP1Y_Mpl5228"
/db_xref="GeneID:10718349"
CDS 527225..528523
/locus_tag="PP1Y_Mpl5228"
/inference="protein motif:COG:COG0477"
/inference="similar to AA sequence:UniProt:B8KHN9"
/note="KEGG: nar:Saro_0804"
/codon_start=1
/transl_table=11
/product="major facilitator transporter"
/protein_id="YP_004538405.1"
/db_xref="GI:334145195"
/db_xref="GeneID:10718349"
/translation="MTKDPQSILSQGAMRPLQIAAVALCILLNALDGFDVLAISFASP
GIASEWGIDRAALGLVLSMELIGMAVGSLVLGNVADRIGRRPTVLGCLVIMAGGMGMA
TLANSVFELSLIRLVTGLGIGGMLACTNALVAEFSNDRHRNLAVAIMAAGYPMGAIIG
GSIATNLLADGHWRDVFTFGAVITAVFLPIAWVLLPESIGYLAQKRGPNALERINVTL
HRLGHDIAQALPPVPEKAPKVSIAQLFAPGLARVTILLTLAYFCHIMTFYYIIKWIPK
IVVDMGYVASKAGDVLVWANVGGLLGASLLSLLTYRFGVRALVIAAMLASTVLVSLFG
QEQETLTGLAMVAAAAGFCTNAAVVGLYALFAKGFPTSVRAGGTGFAIGIGRGGAALG
PIVAGLLFNAGLGLGYVSLLMAMGSLIGAGALLFLKEQGE"
misc_feature 527234..528346
/locus_tag="PP1Y_Mpl5228"
/note="benzoate transport; Region: 2A0115; TIGR00895"
/db_xref="CDD:162095"
misc_feature 527288..>527812
/locus_tag="PP1Y_Mpl5228"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(527330..527332,527339..527347,527351..527356,
527405..527407,527414..527419,527426..527428,
527438..527443,527447..527452,527588..527593,
527600..527605,527612..527617,527624..527626,
527660..527665,527672..527677,527693..527695)
/locus_tag="PP1Y_Mpl5228"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(528571..528867)
/locus_tag="PP1Y_Mpl5250"
/db_xref="GeneID:10718350"
CDS complement(528571..528867)
/locus_tag="PP1Y_Mpl5250"
/inference="similar to AA sequence:UniProt:A5V8L0"
/note="KEGG: swi:Swit_2267"
/codon_start=1
/transl_table=11
/product="antibiotic biosynthesis monooxygenase"
/protein_id="YP_004538406.1"
/db_xref="GI:334145196"
/db_xref="GeneID:10718350"
/translation="MAGKSFIARLRTKPEMRERMIELQAELKSLVFEHEPDAPVYEFL
QSQDDPDLFHVVATFRDEAAFDKHMHIDFHDRLVPGILECLAQDMELTFHTSLG"
misc_feature complement(528658..528849)
/locus_tag="PP1Y_Mpl5250"
/note="Antibiotic biosynthesis monooxygenase; Region: ABM;
pfam03992"
/db_xref="CDD:202845"
gene complement(528872..529174)
/locus_tag="PP1Y_Mpl5254"
/db_xref="GeneID:10718351"
CDS complement(528872..529174)
/locus_tag="PP1Y_Mpl5254"
/inference="protein motif:COG:COG1359"
/inference="similar to AA sequence:UniProt:A5V8K8"
/note="KEGG: swi:Swit_2265"
/codon_start=1
/transl_table=11
/product="antibiotic biosynthesis monooxygenase"
/protein_id="YP_004538407.1"
/db_xref="GI:334145197"
/db_xref="GeneID:10718351"
/translation="MAFSFLSRFRIKDERQDDFIAMARQMEELSKQEPGTLHYQFFRL
GEPGMFAVYESFVDEASDKAHMEYDHNKDLIERIVGCMDGSYERELLFDLEPHRKG"
misc_feature complement(528884..529174)
/locus_tag="PP1Y_Mpl5254"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1359"
/db_xref="CDD:31550"
gene complement(529186..529740)
/locus_tag="PP1Y_Mpl5258"
/db_xref="GeneID:10718352"
CDS complement(529186..529740)
/locus_tag="PP1Y_Mpl5258"
/inference="similar to AA sequence:UniProt:A5V8M3"
/note="KEGG: swi:Swit_2280"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538408.1"
/db_xref="GI:334145198"
/db_xref="GeneID:10718352"
/translation="MDGLEARVARLEAESQIRQLIAHYSFDIDDRLIESVRSLFTEDG
ILRSADGVMYAKGADDIIEQYHGRFDVLGPGHHFMHDIQIDFAGDGSREATGRVSGHA
ELMRKGQMMVAAIRYADRYRHTDQGWKFAERVISFLYYVPLSEYPDILLKPDRNRAYD
TPAPGDFPEHLPSWIAYEKSRGRA"
misc_feature complement(529339..529716)
/locus_tag="PP1Y_Mpl5258"
/note="SnoaL-like domain; Region: SnoaL_4; pfam13577"
/db_xref="CDD:205755"
gene 530027..532519
/locus_tag="PP1Y_Mpl5263"
/db_xref="GeneID:10718353"
CDS 530027..532519
/locus_tag="PP1Y_Mpl5263"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:A5V8K7"
/note="KEGG: swi:Swit_2264"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538409.1"
/db_xref="GI:334145199"
/db_xref="GeneID:10718353"
/translation="MLTKRLYGSTCALALITGMLASPAWAQDATGSAGAQDAAQPAKS
QATSTGLAEIVVTATRRATDLQSTPVSVSAVDSSLIQQASPRDLGDLAAFVPNFSAAT
IANFNAASFAMRGVGQTSIIVYFEPPVAVLVDDFVVPSVQTQLLDTFDVAQVEVLRGP
QGTLFGKNTTGGVVTVRTKKPIIDYVGVEGRMEFGDFGEKKIQAAMNVPISDFAAVRL
VGGYEKSDGYYKNGACYGPVTGFVTNKFEGSTGCLDNATLGGKDVWQARAKLLVEPTP
ELSALFQYEWIRDRSEVVPSVNENYLYTGSNAFLTDLLGLTDPNAQGTDPLDRAAYTG
RNDALLYMGKGQRISVDGIYANIEYNADFGTFTSVSGYRFQRSRIPNSYAGATAEGSD
GQLLSFFDATRDDDRKTWQQELRFASDFQGPFNFVAGGFYQRDKIDFCVSQILGFLDL
TSGPLPFGEWNNTPYLLCNAQKAKSRALFFEGTFKFNDKLTLSAGARYTWDDKTWYGR
QQTFIPALGGGFDPTLTIEHALDASVYNYPAGVVTVSDKWREPTYRASLSYQATDDLF
VYGTYSHGYKGGGFNDQIGGFAAFGEDLDAFRAAARATDPEKADSYELGFKSQFLDNR
LRFNATAFYVKYQDLQKQLNVPIEVNGQPNQVTLFVNAASATVKGLEVEAQANPVEGL
TLRGVLGYQDGKYNSYTADNAGYDLSSAPLDRAPKWQWTLDGTYSVPLGDAYKITFNG
NVAYSGRNLNTQAIDDPLGNTFLNSRTLVNASITLAQADDKYYIRAVGKNLTDKRYRV
AVQNVAGLWLNSQYGAPRYFGVELGVKFGQYQ"
misc_feature 530027..532504
/locus_tag="PP1Y_Mpl5263"
/note="Outer membrane receptor proteins, mostly Fe
transport [Inorganic ion transport and metabolism];
Region: CirA; COG1629"
/db_xref="CDD:31816"
misc_feature 530237..532504
/locus_tag="PP1Y_Mpl5263"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(530237..530266,530294..530323,530357..530374,
530393..530407,530414..530422,530468..530500,
530534..530560)
/locus_tag="PP1Y_Mpl5263"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(531152..531154,531233..531235)
/locus_tag="PP1Y_Mpl5263"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 532668..534782
/locus_tag="PP1Y_Mpl5286"
/db_xref="GeneID:10718354"
CDS 532668..534782
/locus_tag="PP1Y_Mpl5286"
/EC_number="1.-.-.-"
/inference="protein motif:COG:COG4993"
/inference="similar to AA sequence:UniProt:B8KYK8"
/note="KEGG: mpt:Mpe_A0905"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase"
/protein_id="YP_004538410.1"
/db_xref="GI:334145200"
/db_xref="GeneID:10718354"
/translation="MLVAALALALTSCKGGSAQDADGAEADQQWLAQLDDGSDGKDWP
AFGRTYGEQHYSPLNQINDGNVDQLGLAWSVDLPPGNPATGPIEVDGTVYLASGYSVV
RAIDVETGKVKWTYDPRAPEASGIKLRQGWGSRGIAYWNHKVITATQDGRLIAIDEKT
GKPVWTAETFGKDDPLFISGPPRVFDGKVIIGNGGSDESPVRGFVTAWDADTGKFLWK
FYTVPGNPADGFEDNAMKMAAKTWSGDWWNYGGGGSVWNAITYDKANDQILIGTGNGA
PWNHKIRSMGNGDNLFVCSIVALDAKTGKYKWHYQINPGESWDFNASMDMELADLEID
GKPRQVVMTAPKNGFFYVIDRKDGKLISAEPFVEVTWASKIDLKTGRPIEKPNVRYEN
GPVTFKPTPIGAHSWMPMAFSPKTGLTYIPAIDLQVTYDDTGITRENFKWSGGMGLSP
GVGYSIGDAGKKITGWLVAWDPVAQKARWKIPMEVHLNGGIMATGGNLIFQGRPDGGF
SAYNAETGKRLWNFDAKAGVVAPPITYRVKGKQYVTVVAGIGTSAGLFGPMFAKYGID
YRTQQRRVLTFALGAKGTLPPKTPYKPVAFDDPGYTPDTALGQKGERIFNVRCAVCHG
TAAIGGGTAPDLRTSAIPSDPSAFASVVKDGALVPNGMPQFGEFTQADLAGLRQYIRS
RAEVLRKGSQEDVAGSVMKPGD"
misc_feature 532767..534317
/locus_tag="PP1Y_Mpl5286"
/note="PQQ-dependent dehydrogenase, methanol/ethanol
family; Region: PQQ_enz_alc_DH; TIGR03075"
/db_xref="CDD:211785"
misc_feature 532791..534425
/locus_tag="PP1Y_Mpl5286"
/note="PQQ_like domain of the quinohemoprotein alcohol
dehydrogenase (type II); Region: PQQ_ADH_II; cd10279"
/db_xref="CDD:199837"
misc_feature order(532869..532877,532884..532886,532977..532979,
532983..532985,532992..533000,533007..533009,
533130..533132,533136..533138,533145..533153,
533160..533162,533286..533288,533292..533294,
533301..533309,533316..533318,533559..533561,
533565..533567,533574..533582,533589..533591,
533721..533723,533727..533729,533736..533744,
533751..533753,534072..534074,534078..534080,
534087..534095,534102..534104,534195..534197,
534201..534203,534210..534218,534225..534227,
534393..534395,534399..534401)
/locus_tag="PP1Y_Mpl5286"
/note="Trp docking motif [polypeptide binding]; other
site"
/db_xref="CDD:199837"
misc_feature order(532902..532907,533031..533036,533040..533042,
533985..533987,533994..533999,534312..534314,
534327..534335,534375..534377)
/locus_tag="PP1Y_Mpl5286"
/note="cytochrome domain interface [polypeptide binding];
other site"
/db_xref="CDD:199837"
misc_feature order(532914..532916,533052..533057,533064..533066,
533070..533072,533202..533204,533247..533255,
533259..533261,533427..533429,533433..533435,
533487..533489,533499..533501,533622..533624,
533628..533630,533703..533705,533868..533873,
533883..533888,533997..533999,534126..534128,
534318..534323)
/locus_tag="PP1Y_Mpl5286"
/note="active site"
/db_xref="CDD:199837"
misc_feature <534465..534755
/locus_tag="PP1Y_Mpl5286"
/note="Cytochrome c, mono- and diheme variants [Energy
production and conversion]; Region: CccA; COG2010"
/db_xref="CDD:32193"
misc_feature 534483..534707
/locus_tag="PP1Y_Mpl5286"
/note="Cytochrome C oxidase, cbb3-type, subunit III;
Region: Cytochrome_CBB3; pfam13442"
/db_xref="CDD:205620"
gene 534958..535698
/locus_tag="PP1Y_Mpl5313"
/db_xref="GeneID:10718355"
CDS 534958..535698
/locus_tag="PP1Y_Mpl5313"
/inference="protein motif:COG:COG2375"
/inference="similar to AA sequence:UniProt:Q1ZSP3"
/note="KEGG: hch:HCH_03310"
/codon_start=1
/transl_table=11
/product="siderophore-interacting protein"
/protein_id="YP_004538411.1"
/db_xref="GI:334145201"
/db_xref="GeneID:10718355"
/translation="MTVVSSRTVSPSLLRVTLGGEGMAGYPEGSAGGYVKFMFPPAPG
AMKPTVRTYTIRNQREGEIDIDFALHGAGEGHAGPATAWALQARPGQTVELGGPGPAK
PLPSGLDFYIVAGDMTALPAIGVNLEALDRDARGIAIIEIQSESDKQAIDAPEGVTVT
WLVNPVPGSQPDLLVDAVRAVAWPEGKVYAWAASEFTAMRGMRQYLRTERGLGPAELY
ISSYWKQGLNEDDHRSVKREDMEAAGEG"
misc_feature 534961..535650
/locus_tag="PP1Y_Mpl5313"
/note="Siderophore-interacting protein [Inorganic ion
transport and metabolism]; Region: ViuB; COG2375"
/db_xref="CDD:32522"
misc_feature 534964..535629
/locus_tag="PP1Y_Mpl5313"
/note="Siderophore interacting proteins share the domain
structure of the ferredoxin reductase like family.
Siderophores are produced in various bacteria (and some
plants) to extract iron from hosts. Binding constants are
high, so iron can be pilfered from...; Region:
siderophore_interacting; cd06193"
/db_xref="CDD:99790"
misc_feature order(535108..535119,535153..535155,535159..535161,
535165..535167,535189..535200,535309..535311,
535621..535629)
/locus_tag="PP1Y_Mpl5313"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99790"
misc_feature order(535108..535110,535114..535119)
/locus_tag="PP1Y_Mpl5313"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99790"
misc_feature order(535189..535191,535198..535200,535207..535209,
535225..535227)
/locus_tag="PP1Y_Mpl5313"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99790"
misc_feature order(535309..535314,535378..535386,535537..535542)
/locus_tag="PP1Y_Mpl5313"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99790"
gene complement(535702..536292)
/locus_tag="PP1Y_Mpl5323"
/db_xref="GeneID:10718357"
CDS complement(535702..536292)
/locus_tag="PP1Y_Mpl5323"
/inference="protein motif:COG:COG3760"
/inference="similar to AA sequence:UniProt:Q2N7H0"
/note="KEGG: sal:Sala_1835"
/codon_start=1
/transl_table=11
/product="YbaK/prolyl-tRNA synthetase associated
domain-containing protein"
/protein_id="YP_004538412.1"
/db_xref="GI:334145202"
/db_xref="GeneID:10718357"
/translation="MCARTVAGSSARSPSPRFGPSGTEATGGAIVLNSEHALLADLEG
AGVSFTVHDHVAVATVEDSAEVTGHIPGYHTKNLFLKDKAGRYWLITMPGEERADLKL
IASRLGAGRLSFGKPGAMKELLDVIPGAVTPLAAFNDRAGLVTVVLDAAFAPEETINV
HPLRNTATLSLRTADLVAALERWDHPPIVLSLQTED"
misc_feature complement(535717..536193)
/locus_tag="PP1Y_Mpl5323"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG3760"
/db_xref="CDD:33555"
misc_feature complement(535723..536190)
/locus_tag="PP1Y_Mpl5323"
/note="This CD includes bacterial (Agrobacterium
tumefaciens and Caulobacter crescentus ProX, and
Clostridium sticklandii PrdX) and eukaryotic (Plasmodium
falciparum N-terminal ProRS editing domain) sequences. The
C. sticklandii PrdX protein, a homolog of the...; Region:
PrdX_deacylase; cd04335"
/db_xref="CDD:88586"
misc_feature complement(order(535810..535812,535903..535908,
536065..536067))
/locus_tag="PP1Y_Mpl5323"
/note="putative deacylase active site [active]"
/db_xref="CDD:88586"
gene complement(536728..537414)
/locus_tag="PP1Y_Mpl5332"
/db_xref="GeneID:10718359"
CDS complement(536728..537414)
/locus_tag="PP1Y_Mpl5332"
/inference="protein motif:COG:COG1309"
/inference="similar to AA sequence:UniProt:A5V553"
/note="KEGG: swi:Swit_1053"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_004538413.1"
/db_xref="GI:334145203"
/db_xref="GeneID:10718359"
/translation="MPSIRRRYTSPAMRERRKRIVDTAHRILGEGGVTSLTIRRLSVE
AQVAQRTIYRLFGDKDGVVCATVVDRMKEVREHIARRKQTYTLDVVFSELDWMVSEME
RDTLYARVVVGFVFASEQRQLEVRELTSVAYNRLMAWYAVMKAEHRVRDDLDIEQLAR
EHVMHEFLVYRRWSLGACDSPQCRLELHACFLKTAALVLLGDDREEYLRKLIEIQKLL
NELASQAGST"
misc_feature complement(536818..537399)
/locus_tag="PP1Y_Mpl5332"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature complement(537226..537357)
/locus_tag="PP1Y_Mpl5332"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 537688..540021
/locus_tag="PP1Y_Mpl5342"
/db_xref="GeneID:10718360"
CDS 537688..540021
/locus_tag="PP1Y_Mpl5342"
/inference="protein motif:COG:COG1629"
/inference="similar to AA sequence:UniProt:A5V563"
/note="KEGG: swi:Swit_1063"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004538414.1"
/db_xref="GI:334145204"
/db_xref="GeneID:10718360"
/translation="MIGNKHLNCALKLLVTGLLASASTTALAQTAPDSAGGEGGGAPQ
KASGLEEIIVTARRVSESLQDTPVAVSAFTASAIDNKFATDIRGLAGDVPNVVITNVP
GFNAASIGIRGQSTGDIILTFEPAVAVVVDDFVLAHVQTQLFDLFDIDRIEVLRGPQG
TLFGKNTVGGVVNVITKRPEPGFSGEVRLGYSSFNTKDVKAAINIPFTDNLYFRAAGS
FQESDGYYHLTKNNDVDGIQGVPGRGQRWGGSKYFSGRAKLLWEPTADTNIMATYEIL
RDRGDSPPSVNETPPGFLFDVLGFPGIQTTGASPFDTGTTLCQGSATAATCPGTLSGH
RIDVDGLYLRGEHTLEGAGTITVVGGWRRVKSSLPSDYTGENAYLFVSTRDDTRKQYS
VEARFSSDFSDRIKFTVGAMYWGQKMDANATSFLGFLRFLGDPTALTDPNLSTANYKV
DSYAVFGEAEYKVADPFSIFVGARYTKENKSFAVQPQVRRSLVETGFWPQYTDSAKFD
RPTMRAGYRWEIAPGINNYFTYSQGYKSGGYNEQAMSATSALPFKEETADSFEFGLKT
ETADRVLRVNLAAFYVKYNDLQRDAVVPFIDPITGLPGQETRTTNAGKAKVYGLEVEA
SAAPTEGLTLGAALGWQRAKYLEFFTDVDGDGTNDDASYLHLRNAPKWTLSGNARYEF
PPAEWGTIALSADVNYQSEFESTTLNADYSQGEARTLVGASIAWTDPGDRYRIAIFGR
NLLDEVYRVSANSVAGLFNFTNYAPPRSFGVEGSAKF"
misc_feature 537880..540018
/locus_tag="PP1Y_Mpl5342"
/note="TonB-dependent siderophore receptor; Region:
TonB-siderophor; TIGR01783"
/db_xref="CDD:162535"
misc_feature 537895..540018
/locus_tag="PP1Y_Mpl5342"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(537895..537921,537949..537978,538012..538029,
538048..538056,538063..538077,538123..538155,
538189..538215)
/locus_tag="PP1Y_Mpl5342"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(538726..538728,538843..538845)
/locus_tag="PP1Y_Mpl5342"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene complement(540112..541626)
/locus_tag="PP1Y_Mpl5364"
/db_xref="GeneID:10718361"
CDS complement(540112..541626)
/locus_tag="PP1Y_Mpl5364"
/inference="protein motif:COG:COG0457"
/inference="similar to AA sequence:UniProt:A5V562"
/note="KEGG: swi:Swit_1062"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538415.1"
/db_xref="GI:334145205"
/db_xref="GeneID:10718361"
/translation="MWGQLLEEAARAAQGPKPKAARPLIARLLETAPGDADALTLAGI
VAQRTGESDEAIAAFTAARDADPGDPGRHQNLAVALKNKGAIVEALAAFRAALKLRPG
HAATLANLGSCLIAAQQYGEAVDTLEAALKAAPGHPDAHLNLGVALSRLGRHEEAARH
YRLALDARPGHAESALNLVDALAALGRREEAETLARQVLNAIPGHVRATNQLGLLREA
AGDARGAAEAFRTGFDPAAPSHVLGVNLTRALIRAQRFEDALEVSGCLQSASPSITTP
LALSLAALERLGRAKERDALMAIDRFVTVHDIEAVSGFADLRQFNAHLVNELRNQPSL
TEEPEGLVTRGGRQSDDLAKAQSPAIAALCALAAARLADEHARLAAMATDHPFLRALP
AEWSLTLWGTILRPGGEVGAHIHAPNWISGVYYPEYTPPADSNDEGAFAIGILPRELG
GGGPTHVMQPRAGRMILFPSYLWHATMPFGGSEERVSFAFDLVPAGVGQPHRLR"
misc_feature complement(541120..541317)
/locus_tag="PP1Y_Mpl5364"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature complement(<541093..541308)
/locus_tag="PP1Y_Mpl5364"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(541096..541101,541177..541182,
541189..541194,541198..541203,541288..541293,
541300..541305))
/locus_tag="PP1Y_Mpl5364"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(541135..541137,541144..541146,
541156..541158,541192..541194,541237..541239,
541246..541248,541258..541260,541294..541296))
/locus_tag="PP1Y_Mpl5364"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature complement(540154..540432)
/locus_tag="PP1Y_Mpl5364"
/note="Putative 2OG-Fe(II) oxygenase; Region:
2OG-FeII_Oxy_5; pfam13759"
/db_xref="CDD:205933"
gene 541644..541961
/locus_tag="PP1Y_Mpl5379"
/db_xref="GeneID:10718363"
CDS 541644..541961
/locus_tag="PP1Y_Mpl5379"
/inference="protein motif:COG:COG1359"
/inference="similar to AA sequence:UniProt:A5V561"
/note="KEGG: swi:Swit_1061"
/codon_start=1
/transl_table=11
/product="antibiotic biosynthesis monooxygenase"
/protein_id="YP_004538416.1"
/db_xref="GI:334145206"
/db_xref="GeneID:10718363"
/translation="MIGVIMHVRTKPDKTERFIELITQLQKDVRANETETLLFQVMRS
ETEPNAFAFTEMFTSHQAWKDHASRPYHVAMADEGWSCIDGEADIRSFELLGDAPVMG
ETA"
misc_feature 541644..541931
/locus_tag="PP1Y_Mpl5379"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1359"
/db_xref="CDD:31550"
gene 541958..542749
/locus_tag="PP1Y_Mpl5377"
/db_xref="GeneID:10718365"
CDS 541958..542749
/locus_tag="PP1Y_Mpl5377"
/inference="protein motif:COG:COG1028"
/inference="similar to AA sequence:UniProt:A5V560"
/note="KEGG: swi:Swit_1060"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_004538417.1"
/db_xref="GI:334145207"
/db_xref="GeneID:10718365"
/translation="MIGSLEGRIALVTGCTGGIGKETSRALGAAGATVIGADLPEDGG
GWNEGIESSAYHRLDVTDEASWQHVIAAVERDHGKLDVLVHVAGIVVVEKLENTSLEQ
WRKQMAVNVDGVFLGTKVAIPLMSRSGQQLPHGASIVVISSVAGLIGSPLHTGYCASK
GAVRLFAKACAMEFSALGYKVRFNSVHPSGVKTGMVDHILQRFVDNGFAESVEQAAEG
LAPAHPIGRMAEPIDIAKAVRFLASDESGYMHGSELVVDGGYTAQ"
misc_feature 541964..542746
/locus_tag="PP1Y_Mpl5377"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 541985..542743
/locus_tag="PP1Y_Mpl5377"
/note="short chain dehydrogenase; Validated; Region:
PRK07069"
/db_xref="CDD:180822"
misc_feature order(541997..541999,542003..542008,542012..542014,
542069..542077,542213..542221,542378..542386,
542423..542425,542435..542437,542519..542530)
/locus_tag="PP1Y_Mpl5377"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(542285..542287,542384..542386,542423..542425,
542435..542437)
/locus_tag="PP1Y_Mpl5377"
/note="active site"
/db_xref="CDD:187535"
gene 542843..543301
/locus_tag="PP1Y_Mpl5394"
/db_xref="GeneID:10718364"
CDS 542843..543301
/locus_tag="PP1Y_Mpl5394"
/inference="similar to AA sequence:UniProt:A5V559"
/note="KEGG: swi:Swit_1059"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004538418.1"
/db_xref="GI:334145208"
/db_xref="GeneID:10718364"
/translation="MTKEHDPGKLGDLIVNINDCREVELGTGTTIRLLRYSEETGDWV
LWVHMEPGATFAPHWHLGHGQYFVTKGELIYDVGSAPAGTYGYEPIGSRHSEARCDEV
TEYLFMGHGAVAFTEENGEIRFILNHEFLRDVASGEVRSNIANEGMEEAA"
misc_feature 542939..543142
/locus_tag="PP1Y_Mpl5394"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:212615"
gene 543298..544611
/locus_tag="PP1Y_Mpl5403"
/db_xref="GeneID:10718366"
CDS 543298..544611
/locus_tag="PP1Y_Mpl5403"
/inference="protein motif:COG:COG0006"
/inference="similar to AA sequence:UniProt:A5V558"
/note="KEGG: swi:Swit_1058"
/codon_start=1
/transl_table=11
/product="peptidase M24"
/protein_id="YP_004538419.1"
/db_xref="GI:334145209"
/db_xref="GeneID:10718366"
/translation="MTSASNPRADRLRAMLAAEGLDAVVLSHPHDVRYATGYHSVLER
WGQMEPVAAAIVYADPDKPLTLVIPEANLGIVAVLNRQEKRCTFGEVRTFEMLNFCEV
SRYIDPDRKGGQLAHDAMSLAGAIAGECQGDIVAAIASALADNGMTGKAIGFDEPRVS
EKLRSRLEHRYSDALDFLIRVRVVKTEEELARYRKVGRIADAIIAHAGSLLHEGADWN
DVQARICDFMVRHEVIPVDEGAMLFGGAYEQDDFIPDLFRTQGNRALRRGDIVILETQ
GIHDGFWVDINRTAVIGEPSAEYRRQHDILRDAFLIMVEQLRPGVRTADLPQIGYEYL
KSKGVATPEKLLVVAHGIGLMPLEIPLPYPSAGLAGVKQGFVLEEDMLISLDSLYFGA
KLGPCHMENVYAITKDGPESMYQAPLELIVAQTADRAMAQPAGAA"
misc_feature 543298..544563
/locus_tag="PP1Y_Mpl5403"
/note="Xaa-Pro aminopeptidase [Amino acid transport and
metabolism]; Region: PepP; COG0006"
/db_xref="CDD:30356"
misc_feature 543319..543849
/locus_tag="PP1Y_Mpl5403"
/note="Creatinase/Prolidase N-terminal domain; Region:
Creatinase_N; pfam01321"
/db_xref="CDD:201727"
misc_feature 543865..544527
/locus_tag="PP1Y_Mpl5403"
/note="A family including aminopeptidase P, aminopeptidase
M, and prolidase. Also known as metallopeptidase family
M24. This family of enzymes is able to cleave amido-,
imido- and amidino-containing bonds. Members exibit
relatively narrow substrate specificity...; Region:
APP_MetAP; cd01066"
/db_xref="CDD:29969"
misc_feature order(544066..544068,544117..544119,544150..544152,
544345..544347,544453..544455,544495..544497)
/locus_tag="PP1Y_Mpl5403"
/note="active site"
/db_xref="CDD:29969"
gene 544627..545631
/locus_tag="PP1Y_Mpl5413"
/db_xref="GeneID:10718367"
CDS 544627..545631
/locus_tag="PP1Y_Mpl5413"
/EC_number="1.2.4.1"
/inference="protein motif:COG:COG1071"
/inference="similar to AA sequence:UniProt:A5V557"
/note="assigned by KAAS to KEGG Orthology:K00161 pyruvate
dehydrogenase E1 component subunit alpha"
/codon_start=1
/transl_table=11
/product="pyruvate dehydrogenase E1 component subunit
alpha"
/protein_id="YP_004538420.1"
/db_xref="GI:334145210"
/db_xref="GeneID:10718367"
/translation="MSLAGDNDRKIEKYRRMQRIRQFEAKAEAIHAQGEIPGALHTYA
GMEASGVGACMALRDDDYMVGNHRSHGHPIAKGAALRPLMAELLGKATGVCKGKGGSM
HLSDFAMGSLGETSIVGSGAPVAAGAALGAKLQGLDRVALCFFGDGASSEGAVHEGMN
LAAVWKLPAIFVCENNRFGMSTPTSHAVAGENVADRAKGYGIPGVIVDGQDVDAVEDA
VREAVDRARAGLGPTLIETKTYRYGDHAVNMGRELTPRGPEHDEWLGRDPIVLYRARL
EAAGVSADDLDAIEKAVAEEVADALSFARESAYPEFEEAFDHVLVERLPIPDDVRAHA
"
misc_feature 544645..545589
/locus_tag="PP1Y_Mpl5413"
/note="pyruvate dehydrogenase E1 component, alpha subunit;
Region: PDH_E1_alph_y; TIGR03182"
/db_xref="CDD:188297"
misc_feature 544666..545538
/locus_tag="PP1Y_Mpl5413"
/note="Thiamine pyrophosphate (TPP) family, E1 of
PDC_ADC_BCADC subfamily, TPP-binding module; composed of
proteins similar to the E1 components of the human
pyruvate dehydrogenase complex (PDC), the acetoin
dehydrogenase complex (ADC) and the branched chain...;
Region: TPP_E1_PDC_ADC_BCADC; cd02000"
/db_xref="CDD:48163"
misc_feature order(544735..544737,544891..544893,544972..544977,
545068..545070,545074..545085,545092..545094,
545104..545106,545116..545118,545161..545172,
545212..545214,545227..545229,545374..545376,
545386..545388)
/locus_tag="PP1Y_Mpl5413"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:48163"
misc_feature order(544825..544830,544972..544974,544978..544980,
545062..545073,545152..545154,545158..545160,
545359..545361)
/locus_tag="PP1Y_Mpl5413"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:48163"
misc_feature order(544957..544959,544963..544965,544969..544971,
544984..544986,544993..544998,545005..545010,
545014..545019,545026..545028,545083..545088,
545104..545109,545116..545118)
/locus_tag="PP1Y_Mpl5413"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:48163"
misc_feature order(545344..545364,545371..545400,545422..545430)
/locus_tag="PP1Y_Mpl5413"
/note="phosphorylation loop region [posttranslational
modification]"
/db_xref="CDD:48163"
gene 545645..546637
/locus_tag="PP1Y_Mpl5423"
/db_xref="GeneID:10718368"
CDS 545645..546637
/locus_tag="PP1Y_Mpl5423"
/EC_number="1.2.4.1"
