LOCUS NC_015695 38784 bp DNA circular CON 17-SEP-2023
DEFINITION Runella slithyformis DSM 19594 plasmid pRUNSL05, complete sequence.
ACCESSION NC_015695
VERSION NC_015695.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN02232050
Assembly: GCF_000218895.1
KEYWORDS GSC:MIGS:2.1; RefSeq.
SOURCE Runella slithyformis DSM 19594
ORGANISM Runella slithyformis DSM 19594
Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
Runella.
REFERENCE 1 (bases 1 to 38784)
AUTHORS Copeland,A., Zhang,X., Misra,M., Lapidus,A., Nolan,M., Lucas,S.,
Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S.,
Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A.,
Palaniappan,K., Land,M., Hauser,L., Pan,C., Jeffries,C.D.,
Detter,J.C., Brambilla,E.M., Rohde,M., Djao,O.D., Goker,M.,
Sikorski,J., Tindall,B.J., Woyke,T., Bristow,J., Eisen,J.A.,
Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and
Mavromatis,K.
TITLE Complete genome sequence of the aquatic bacterium Runella
slithyformis type strain (LSU 4(T))
JOURNAL Stand Genomic Sci 6 (2), 145-154 (2012)
PUBMED 22768358
REFERENCE 2 (bases 1 to 38784)
AUTHORS Lucas,S., Han,J., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S.,
Peters,L., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G.,
Zhang,X., Misra,M., Detter,J.C., Tapia,R., Han,C., Land,M.,
Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T.,
Wu,D., Tindall,B., Faehrich,R., Brambilla,E., Klenk,H.-P. and
Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The complete genome of plasmid 5 of Runella slithyformis DSM 19594
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 38784)
AUTHORS Lucas,S., Han,J., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S.,
Peters,L., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G.,
Zhang,X., Misra,M., Detter,J.C., Tapia,R., Han,C., Land,M.,
Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T.,
Wu,D., Tindall,B., Faehrich,R., Brambilla,E., Klenk,H.-P. and
Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (08-JUN-2011) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
CP002864.1.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4087357
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##MIGS-Data-START##
investigation_type :: bacteria_archaea
project_name :: Runella slithyformis LSU4, DSM 19594
collection_date :: Missing
lat_lon :: 30.46788 -91.129604
depth :: Missing
alt_elev :: Missing
country :: USA
environment :: Fresh water, Host
num_replicons :: 6
ref_biomaterial :: DSM 19594, ATCC 29530, LMG 11500, NCIMB
11436
biotic_relationship :: Free living
trophic_level :: Missing
rel_to_oxygen :: Missing
isol_growth_condt :: Missing
sequencing_meth :: WGS
assembly :: Newbler v. 2.3 (pre-release)
finishing_strategy :: Finished
GOLD Stamp ID :: Gi04364
Type Strain :: Yes
Funding Program :: DOE-GEBA 2009
Gene Calling Method :: Prodigal 1.4, GenePRIMP
Isolation Site :: Fresh water lake; USA, Louisiana, Baton
Rouge
Isolation Comments :: isolated by JM Larkin for Louisiana State
Univ
Cell Shape :: Rod-shaped
Motility :: Nonmotile
Temperature Range :: Psychrophile
Gram Staining :: Gram-
Diseases :: None
##MIGS-Data-END##
##Genome-Assembly-Data-START##
Finishing Goal :: Finished
Current Finishing Status :: Finished
Assembly Method :: Newbler v. 2.3
Genome Coverage :: 30x
Sequencing Technology :: 454/Illumina
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 09/17/2023 15:10:24
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.6
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 5,868
CDSs (total) :: 5,817
Genes (coding) :: 5,798
CDSs (with protein) :: 5,798
Genes (RNA) :: 51
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 43
ncRNAs :: 2
Pseudo Genes (total) :: 19
CDSs (without protein) :: 19
Pseudo Genes (ambiguous residues) :: 0 of 19
Pseudo Genes (frameshifted) :: 9 of 19
Pseudo Genes (incomplete) :: 11 of 19
Pseudo Genes (internal stop) :: 3 of 19
Pseudo Genes (multiple problems) :: 4 of 19
CRISPR Arrays :: 2
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..38784
/organism="Runella slithyformis DSM 19594"
/mol_type="genomic DNA"
/strain="DSM 19594"
/isolation_source="fresh water lake"
/culture_collection="DSM:19594"
/type_material="type strain of Runella slithyformis"
/db_xref="taxon:761193"
/plasmid="pRUNSL05"
/country="USA"
/lat_lon="30.46788 N 91.129604 W"
/collected_by="JM Larkin"
gene 140..1321
/locus_tag="RUNSL_RS29070"
/old_locus_tag="Runsl_5736"
CDS 140..1321
/locus_tag="RUNSL_RS29070"
/old_locus_tag="Runsl_5736"
/EC_number="2.4.-.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_016197118.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glycosyltransferase"
/protein_id="WP_013921761.1"
/translation="MDPLMNDIVCFSHLRWNFVHQRPQHLLSRFANNSRIFFIEEPII
YEGMDKIELKSPHDNVYVVVPYLQSSLSTCAVERQKTLLVMLFRQQVIKNYLFWYYTP
QALTISDIFRPKLIVYDCMDELSAFKFAPIELKQKEKELFSKSDIIFTGGQSLFEAKK
NLHDAVYCFPSSIDKVHFGKARTCTKEPEDQAKIPFPRIGFYGVVDERFDIELLRQVS
DARPDWQFVIIGPIVKIDPTTLPKSDNIHYLGSKSYDELPLYLSGWDIATCMFARNES
TKYISPTKTPEYLAGGKPVISTNIKDVVDTYGKNDLVYIVENAQEFIESAEKELAKKD
KKVWLEKVDSFLMNNSWDITWASMMVLMRHKLNTKSALQRKSKILPQTVFENFSRNVA
I"
gene 1373..3550
/locus_tag="RUNSL_RS29075"
/old_locus_tag="Runsl_5737"
CDS 1373..3550
/locus_tag="RUNSL_RS29075"
/old_locus_tag="Runsl_5737"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012407036.1"
/GO_function="GO:0004553 - hydrolase activity, hydrolyzing
O-glycosyl compounds [Evidence IEA]"
/GO_process="GO:0005975 - carbohydrate metabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="family 1 glycosylhydrolase"
/protein_id="WP_013921762.1"
/translation="MVAKKSTFAIPDVWAGIECSFNRIGDSFSDQLVFSGHYERADDI
DQFAELGIKALHYPILWELHQPQKESVIQWDWIAAQLQKIQSHSITPIIGLLHHGSGP
AYTHLLDDDFATGLSSFAKKVATRFPELTHYKPINEPLTTARFSGLYGLWHPHAREDV
IFAKILLNQLKAIVLSMEEIRKINPEAKLIQTEDLSKTYSTPLLQYQADFENHRRWLT
YDILMGKLDRQHPLWSYFIGLGFSEKSLLFFQERPCIPDLLGVNHYVTSERFLDDDLS
RYPTHMHGGNGRHAYVDVEAIRVNHPHKAGLKVLLEELRDRYPAIDIALTEVHLHCTR
EEQLRWLKHTWDTCVELNAQGANIKALTVWALLGAFGWNKLLTQPGGDYESGIFDLRS
PSPRPTALAALVKALSNGCDFQHPVLKQKGWWEKESRFIHPLPHREKVFDFLPPTQPL
LVIGKNGTLGRAFGLLCQQRGIKYRLLSRQELDICDMQSIEAVFKSYRPWAVVNAAGY
ARIDSAELEPQKCFNDNVTGVKNLTQACKMWGVKLLTFSSSMVFDGMKTSPYLESDLV
SPLNTYGRSKVEAEKAVLEADCRALVIRTSLIFSPWDHLNFVGQIVTSLNRDEPLVCP
KNVFISPTYLPDLVHTALDLLIDDEIGIWHLTNQGEVNWAEFASDIARRTGNDTTLIN
RLSPERMAWKAPRPYYSVLGSEKGIFLPPLTHALDRYFMEKAG"
gene complement(3665..4189)
/locus_tag="RUNSL_RS29080"
/old_locus_tag="Runsl_5738"
CDS complement(3665..4189)
/locus_tag="RUNSL_RS29080"
/old_locus_tag="Runsl_5738"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012024722.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ferritin-like domain-containing protein"
/protein_id="WP_041344219.1"
/translation="MKTSSKSSDAENATGLRELFEDMLKDIYYAEKALTKALPKMADK
ATSGVLSDALLEHLSVTEGQVDRLEEVFEVLGLQPQAKKCEAIEGLIKEANEIIESTE
EGNVRDAGIIAGSQKVEHYEIASYGTLVTFAKTLGENEAAALLAETLQEEKEADIKLT
AIAESSINEEAAEE"
gene 4459..5229
/locus_tag="RUNSL_RS29085"
/old_locus_tag="Runsl_5739"
CDS 4459..5229
/locus_tag="RUNSL_RS29085"
/old_locus_tag="Runsl_5739"
/inference="COORDINATES: protein motif:HMM:NF013429.3"
/GO_function="GO:0003824 - catalytic activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sugar phosphate isomerase/epimerase family
protein"
/protein_id="WP_041344211.1"
/translation="MTVREYAHLCKNQGLDGFDLGSILLKNHTPKYVSHLKKEIEEEG
IPLIMVTAYPDFTHPEALQRMREFDFLVHDIALASALGAKYLRVTAGQAHPGVSVAEG
IEWAINSLKKAAAVSDQYGITLVYENHAKPGVWEYMDFSNPPEIFLKIAEGLRNTSIG
INFDTANILVAGHETTLEVLEEVYDKVLTIHVADTASIGKMAPVALGTGLVPFREIFH
YLKEKEFNGWLCLEEFGNNGEEGVKQAIDFVRSTWIEA"
gene 5307..5846
/locus_tag="RUNSL_RS29090"
/old_locus_tag="Runsl_5740"
CDS 5307..5846
/locus_tag="RUNSL_RS29090"
/old_locus_tag="Runsl_5740"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011583820.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lipocalin family protein"
/protein_id="WP_013921765.1"
/translation="MKSTHVIATVVAASAVAIALSSFVKIPKGAIAVKPFDQKKYLGK
WYEIARLDYKWEKNLDNVTATYSLKENGDIKVDNRGYNFKKEKWEESIGKAKPVADPE
EARLKVSFFGPFYAGYNVIALDKDYKYALVVGDNTRYMWILSREKTIPETIKQDYLAQ
AKALGFRTEELVWVNHDKN"
gene complement(5984..6844)
/locus_tag="RUNSL_RS29095"
/old_locus_tag="Runsl_5741"
CDS complement(5984..6844)
/locus_tag="RUNSL_RS29095"
/old_locus_tag="Runsl_5741"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015813695.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF1080 domain-containing protein"
/protein_id="WP_013921766.1"
/translation="MKTLLIALSLLCTIAAFGQKKAETPEWKQLFNGKNLDGWDVKIR
GYGLNDNYGNTFRVEDGKMVVRYDQYDDFKQKYGHIFYKGDFSYYRVAVEYRFVGEQA
PKGEGWAWRNSGIMVHGQPAATMGKDQDFPASIEVQLLGGNEKKRTTCNLCTPGTNVV
MDGKLITQHCINSTSQTYNGDQWVRAEVLVLGDSLIQHFVNGEKVLEYNKPQLGGGNV
SGHDPALMISGKLLDHGSISLQSESHPVEFRKVELLELKGCMDPKAKNFKSYYVKEDN
STCVYGRKKK"
gene complement(6929..9571)
/locus_tag="RUNSL_RS29100"
/old_locus_tag="Runsl_5742"
CDS complement(6929..9571)
/locus_tag="RUNSL_RS29100"
/old_locus_tag="Runsl_5742"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_009285408.1"
/GO_function="GO:0009055 - electron transfer activity
[Evidence IEA]"
/GO_function="GO:0020037 - heme binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="c-type cytochrome"
/protein_id="WP_041344213.1"
/translation="MLKVTYTFFSAFLFLFLAGTRPWQSEPSQQYSVAARADSLRNAS
EWPEELIVTNFSSADLTPSPACLAVAPTGEVYVGVDMIGSLGKKPGKGSIVRLVDSDN
DGKMDRHTTYAMVDNPRGILPVGDRLYVLHTQFSKETGIASGMDLVVFEDKNHDGMAD
GPSVPIIEHISSPKFLQSRGTDHATNGIRMGIDGWIYIAVGDFGFHNATDRSGKKLTM
LGGGIVRVRPDGTEMEVYTHGLRNIYDVAIDPFMNIFARGNTNDGGGWNIRFSHQIQS
GEYGYPVLFKHFTDEIIPALVDLGGGSGTGALFMDDDTWPANYNNVPMMADWGRSQLY
IHRLSPDGAGFTQKEEKFIKLAQITDVDIDASGRAYLSAWDGAGYSGNASKGFVVRAV
PNNWKYRPFADLKKASVKKLTSLLKSGSGVARLAAQQELLTRPANKTAKPVWKIVTDG
KLPLAVRVAGLYTYAQAAGTDGIENLVTLTSDKDLQEFALRALADRKPKLSTVPIEPF
LNGLKAASPRVQIAAAVGLGRLGRPEAAEALVQVSVPGSFAAPAIGTEGPHATPNSAI
IPPHIAVRSLVSLHAVDACVKAIGTANSTIALWALRYMHDPKAVAGLLNAYQRTNDET
LKKQIIITLSRLYKKEADYDGSWWWSTRPDTHGPYYKAITWESSADIKDFLTKEWSKS
ADKKFFVDLNSRHRMEIPEFGAEEPVAVKEEIKVDLEKIRNKKGQIGEASIEDVMLAM
AKIPGDAALGKTLFTQQGCIACHSLSKGETMKGPFMGQIGSIMNREQIAESILKPNAS
ISQGFSSVLITAKRNKSYMGFITEESASKVVLRDITGQVFTIKTSDIVSRKEMETSMM
PSGLANALSYEEFASLLSFLSQQK"
gene complement(9718..10542)
/locus_tag="RUNSL_RS29105"
/old_locus_tag="Runsl_5743"
CDS complement(9718..10542)
/locus_tag="RUNSL_RS29105"
/old_locus_tag="Runsl_5743"
/EC_number="3.1.-.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_020606035.1"
/GO_function="GO:0016788 - hydrolase activity, acting on
ester bonds [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="SGNH/GDSL hydrolase family protein"
/protein_id="WP_013921768.1"
/translation="MKKYLSLIVLVGLFSFFSAKKIVWVAIGDSITYLNEHPNETGNR
ITKGYMTRVVEKLPEIEYINQGHNGWTSGRIAEKIEELNLVKADVYSVFLGTNDWWAG
RPLGTFADYENNTGNGTVYGSFRLIINKLRGLNKDAKIILITPMQRADFVYIANMKNN
AYGSYKDKKGQTLAQFAEAINTIGKYEHFPMVDLYHDRKLKLKHLVEYKRLKDPQTGQ
YRNYRYPEFIDIPFNPETDEYPYPVEAIDMTYDGLHPSDKGYEVIAKKLIKTLKNQ"
gene complement(10557..12509)
/locus_tag="RUNSL_RS29110"
/old_locus_tag="Runsl_5744"
CDS complement(10557..12509)
/locus_tag="RUNSL_RS29110"
/old_locus_tag="Runsl_5744"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015809511.1"
/GO_function="GO:0016787 - hydrolase activity [Evidence
IEA]"
/GO_process="GO:0008152 - metabolic process [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CocE/NonD family hydrolase"
/protein_id="WP_229599843.1"
/translation="MNSSTPKSHPLTNSLRTFIAPLSVAFLLLFLTTGAFAQLSKIRE
DSLYIRQHYTKIERMIPMRDGVKLFASIYVPKDVATGAKYPIMLNRTPYSSAPYGDTL
YKLSLGPSMHFAHDGYIFVYQDVRGKYMSEGDFEAYRPFIAKKKNKTDNDESSDAYDT
IEWLIKNVEGNNGRVGTWGISAPGYYTTMTNIEAHPALKASSPQAPVTDWYMGDDRHH
NGAFFLMGTFSFISSYGAPRPTPSPRGRPGFSAYGTPDGYEFYKNLGPLKNVNEKIFK
GENRIWNQLMEHETYDEFWQSRTPVPHLKNIKPAVMVVGGWFDQEDLYGPLKTYQGIE
NNKPTSPNLLVMGPWIHGGWSRGTGESLGHIRFGSKTSEFYQKEIEFPFFNHYLKDKP
NPELPKAYIFETGANEWRKYDQWPPKNAVEKKLYLHPNRKLSFSPTVTTMEAGAKPVF
NEYLSDPDKPVPYTAEIRNIRGSDFMYEDQRFAATRPDVLVYESDVLTEDVIIAGNVM
ANLFVSTTGTDADFVVKLIDVYPGNAPNDSPENPRKAMGGFQLLVRGEVMRSKFRKSF
STPEAMVPNKMENVRFDMQDAAHRFKKGHKIMIQIQSSWFPLVDRNPQKFVNIYKAEA
ADFQKAYHRVYSSGVGSSYISVRVVE"
gene complement(12637..13833)
/locus_tag="RUNSL_RS29115"
/old_locus_tag="Runsl_5745"
CDS complement(12637..13833)
/locus_tag="RUNSL_RS29115"
/old_locus_tag="Runsl_5745"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019991306.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tyrosine-type recombinase/integrase"
/protein_id="WP_229599844.1"
/translation="MKRPPMMLQRIAQQEKITKTGGNAVLSVSQLVSYFEAWLKKPNN
YPRIARAYVLYCLDHNFGIDSVSLSLYAAGKKGNVVSPARKFLKFYIQQGQPRIVADA
PASSKVSPAANELILGYLADATHLRGDQSRENYTKALNAFFEYIQAETEAGRPASFST
LTVGQYIHFLRGKSLSAFTINFYLSVIKQLTLWVIKNRNRLNLSAEQLEDLHEIGSIR
GLRIERGFYKESLSENELAELLISIEDPTDRTIVALLGIEGLRTVEVCRLLIGDVDLA
RGQLWVLGKGKHTKKAVKLFEACAESLCRYMTGVNAPGNTPLFPDLKTAQIRYRVDKY
LKASGLKRPKVSAHSLRHTVGQLLIEKGVEPIHVQRHLRHELFETTQFYIKKQTEKEY
LKKMPD"
gene complement(13917..15113)
/locus_tag="RUNSL_RS29120"
/old_locus_tag="Runsl_5746"
CDS complement(13917..15113)
/locus_tag="RUNSL_RS29120"
/old_locus_tag="Runsl_5746"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015031172.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AAA family ATPase"
/protein_id="WP_013921771.1"
/translation="MEKLFSFQDNLLRSVTTDFKRYLYDEISFESRMLAIKGIRGVGK
TTLLLQYLKTQNASKSLYVTADHPWFYTNGLLDTAEEWHKQGGKLLIIDEVHKYANWS
AELKNIYDGFPDLQVIFTASSALDIYRGEADLSRRVLSYSLHGLSFREYLSINNIYTF
QPVSLENILENSRQLCVEILEKIEAPLVYFKKYLRSGYLPFGTRETKEEDYLARVYQI
VDATLAYDLAFINDYSAVHQSKIKKLLGILAETVPFIPNITELAATLQVSRNTLLLLL
EHLDRGALITKISKTGKGTSLLQKPDKIILENTNFSYALSQQPVEGTLRETFFVNQLR
NKGYKVEVAEEGDFLVDGRFTFEVGGKSKKQKQIKEVENAFLVKDNINSAYGNVIPVW
LFGFLY"
gene 15268..16335
/gene="dinB"
/locus_tag="RUNSL_RS29125"
/old_locus_tag="Runsl_5747"
CDS 15268..16335
/gene="dinB"
/locus_tag="RUNSL_RS29125"
/old_locus_tag="Runsl_5747"
/EC_number="2.7.7.7"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015028661.1"
/GO_function="GO:0003684 - damaged DNA binding [Evidence
IEA]"
/GO_function="GO:0003887 - DNA-directed DNA polymerase
activity [Evidence IEA]"
/GO_process="GO:0006281 - DNA repair [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA polymerase IV"
/protein_id="WP_013921772.1"
/translation="MNRKIIHIDMDAFYASVEQRDDPSLRGKPVAVGGSSDRGVVAAA
SYEARKYGVRSAMSSKVAARKCPALIFVKPRFEVYKYVSEQIRGIFAEFTPLIEPLSL
DEAYLDVTENLKKMRSATLIAQEIKQRIVETTQLTASAGVSYNKFLAKLASDFRKPNG
IYVIGPDEGEAFVANLTVNKFHGIGKVTAEKMNQLGIQTGMDLKSKTEFFLRTHFGKM
GSYYYNIARGIDQRPVEADRIRKSVGSENTFDRDLETLAEMEGGLLPLIEDVWKWCTR
TQIYGRTATLKIKFNDFQMITRSQSAFLPIREKALFEKIIFELLNKNFPTDKPVRLLG
VSIHNLEVTHPTEGQQLTLNF"
gene 16515..17372
/locus_tag="RUNSL_RS29130"
/old_locus_tag="Runsl_5748"
CDS 16515..17372
/locus_tag="RUNSL_RS29130"
/old_locus_tag="Runsl_5748"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019990013.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TIM barrel protein"
/protein_id="WP_013921773.1"
/translation="MTNRRSFLKNTVATIALAGPAAASVQASQPEAQASEDLFKLGIA
GYSFVHFKLDQALEMMKKVDVHYLCIKDFHLPFNSTDEQIATFHATLKNSGVTGYAVG
PIYMKTTQEIDNGFAYAKRVGVKLIVGVPNEDLLPYIDKKVKEYDMRYAIHIHGPDIK
LWPNASSVIDAVKNLDARIGLCFDMGHDARFGDDPIADLEKYQKRIFDIHLKNVTAAS
KEGKTCELGRGIIDIPAFVAMLRKIKYTGSCSLEYEKDMKDPLAGIAESVGYFKGVCD
ASKSGKRKV"
gene 17414..18757
/locus_tag="RUNSL_RS29135"
/old_locus_tag="Runsl_5749"
CDS 17414..18757
/locus_tag="RUNSL_RS29135"
/old_locus_tag="Runsl_5749"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019990014.1"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/GO_function="GO:0016651 - oxidoreductase activity, acting
on NAD(P)H [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Gfo/Idh/MocA family oxidoreductase"
/protein_id="WP_013921774.1"
/translation="MENSRREFIKKAALSTAGLTFGGLATGMSAKSYAKIIGANDRIN
VAILGLGRRLGAYFEPIGLKSSNVELIYLCDVMKKQRESAAQKFSKYITYTPKLENDF
RKVFADKQVDAIFNATPDHWHAPGTWMAVQAGKHVYVEKPCSHNPREGEILGECQRKY
GKVIQMGNQQRSAPESIDIIQQIHNGAIGTPYKAVAFYASARGEVPVPKKAPVPDGLD
WELFQGPAPRREYTHDTWDYNWHWYGWDYGTAESGNNATHELDVARWALQVDFPEYVT
VEAAKRSFLEDGWTMYDTMDAMFRFPGNKIIKWDGKSRNGHKTYGSDRGTVIYGSTGS
VYVDRDGYKLFNRDGKVIKERKASGSEAGTALGGGGDMTTLHVVNFFDAIRGKAKQAS
PIEEGAKSTLLSHLANIAYRTNKSFDVDSKNGHIKDKEAMKLWSREYEKGWEPKI"
gene complement(18912..19880)
/gene="gguC"
/locus_tag="RUNSL_RS29140"
/old_locus_tag="Runsl_5750"
CDS complement(18912..19880)
/gene="gguC"
/locus_tag="RUNSL_RS29140"
/old_locus_tag="Runsl_5750"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018917157.1"
/GO_function="GO:0003824 - catalytic activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AraD1 family protein"
/protein_id="WP_013921775.1"
/translation="MRLLQFLDSENKPRTGIVNGARIQLLASVNTVYELFHDAVRQGV
SPEERAAQLAGNQYAEYEKLIQDKRLLLPLMHPDPYHTWVSGTGLTHLGSAASRNAMH
EKMSKTNASELTDSMKIFKMGLENGKMQSGVPASQPEWFYKGNGLMAVPPGHDIPSPA
FALDGGEEPEMVGLYIVDAQGNPQRIGFAVGNEFSDHKMERINYLYLAHSKLRHCSYG
PEILLGNPPDSITGTTRIVRGNAVLWEKEFLTGEANMSHNLANLEHHHFKYSMFRQPG
DVHIHFFGTSVLSFADGIETRDGDIFEIKAEGFGEPLRNRLSVQKG"
gene complement(19995..20426)
/locus_tag="RUNSL_RS29145"
/old_locus_tag="Runsl_5751"
CDS complement(19995..20426)
/locus_tag="RUNSL_RS29145"
/old_locus_tag="Runsl_5751"
/inference="COORDINATES: protein motif:HMM:NF022072.3"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="SRPBCC family protein"
/protein_id="WP_041344221.1"
/translation="MKINENAPVKQKNQIVINAVPEKVWAVLTDINQWGSWNEKITEA
QASETQKVGARFDWKVNGASIKSILHTVSTHKAFGWSGTTFGGSAIHNWFLTAHQAGT
LVNVEESMEGWLVSLFKNKMNRDLAKDMQFWLEMLKRECEK"
gene complement(20498..21082)
/locus_tag="RUNSL_RS29150"
/old_locus_tag="Runsl_5752"
CDS complement(20498..21082)
/locus_tag="RUNSL_RS29150"
/old_locus_tag="Runsl_5752"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018473421.1"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/GO_function="GO:0030552 - cAMP binding [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Crp/Fnr family transcriptional regulator"
/protein_id="WP_013921777.1"
/translation="MDNAFENYIQSYFGVPAETVAEIVSYFRPQSLVKGDFFLKEGAH
CDKMGFVQSGIVREYLTDEHGREVTKWISTQGYFVVDIAGFLFQSPARWNLQALSDCE
LLVIHKSDYAQISQKVPQWPQLEKLFIARCFTILEQRIVTHLSLSSEERYALFFSHYR
ELFNLVPLQYLASMLGMTPETFSRIRNKWAKKSS"
gene 21205..22392
/locus_tag="RUNSL_RS29155"
/old_locus_tag="Runsl_5753"
CDS 21205..22392
/locus_tag="RUNSL_RS29155"
/old_locus_tag="Runsl_5753"
/EC_number="1.-.-.-"
/inference="COORDINATES: protein motif:HMM:NF013434.3"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="FAD-binding oxidoreductase"
/protein_id="WP_013921778.1"
/translation="MSKIYDVIVIGRGLFGCPAAKYLQMDGLETLLIGPKEPAASEYD
RARVFSSHYDSGRVTRKIGKTKDWSRLNAQTQAAFKTIEAQSGMHFFGNEGCLYISDL
LPDDHFDKAVRHQLLSKEESDFAIIEEEQLPELFPFFRFRKPSVAYLEKALSGHLNPR
RLIEAQLKIFTESGGETVDEVVESVIDKGDIYEVSTANGQRFKAKKILYATGVFHPFF
GFNTPTIPLEIKTETIALAEVSKEQAAGLQSMPSLLYTCKTETYDEIYAIRPVLYPTG
RYFLKLGANLTDDRFLTRIEDIKKWFCSPPLPQQEEVLKKMTVELFPTIPFLSFQVKH
CIIEYTQSRRPLIDKVGREQYICTGGNGYGAMCSDAMGRLGALCVQGKDFQEGFSAGF
FAL"
gene complement(22440..24092)
/locus_tag="RUNSL_RS29160"
/old_locus_tag="Runsl_5754"
CDS complement(22440..24092)
/locus_tag="RUNSL_RS29160"
/old_locus_tag="Runsl_5754"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015028615.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="altronate dehydratase family protein"
/protein_id="WP_013921779.1"
/translation="MHTYLSVHPKDNVLVALQNLPKGTAIEYNGQSFDLIMDIPSKHK
FVTEDLAAGDHVTMYGVLVGKATQPIRRGEQVTTFNLKHDSDEYSVSKRKPYPEWQAP
DVSKWQGRTFMGYHRSDGQVGTANYWLVVPLVFCENRNILKLKDAFDKALGYAFPDIY
LQQTQELVQLYQTQKSDGIAAYTPSFTSEKPVIKPLFPNLDGIKFLTHESGCGENNQD
SALLAALFGAYANNANVAGITVLSLGCQKTQFEDLTNEIKSRNPLFDKPILFYEQQAY
GTEFDMLSAAIKGTFQALIEANKLERRPAPLSKLNIGLKCGGSDGFSGISANPVLGHL
SDIVVALNGRTYLAEFPELCGVEQELIDRCADEEKAEKFETLMRQYASKAEAVGAGFD
MNPSAGNIKDGLITDAIKSAGAAKKGGTAPIADVLNYTEVSKVPGLHLVCTPGNDVLA
TTGQAAAGATITLFTTGLGTPTGNPICPMVKVATNSKLAQKMSDIIDFDCGPIIVGEK
TIEQTAEELLEYCIELASGTFKTKAQLLGQDDFMPWKRGVSL"
gene complement(24188..25768)
/locus_tag="RUNSL_RS29165"
/old_locus_tag="Runsl_5755"
CDS complement(24188..25768)
/locus_tag="RUNSL_RS29165"
/old_locus_tag="Runsl_5755"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015028634.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="aldehyde dehydrogenase (NADP(+))"
/protein_id="WP_013921780.1"
/translation="MNLEGKQLIGFTVSSEGESVFQAPNPSTGETLPTQFHKATKAEL
ESAAQKAQAAFKVYRKKSGIEKAIFLEKIAEEIEAIGDDLVQIATAETGLPAGRIQGE
RGRTTGQLRLFAQLLREGSWVNARIETAIPDRQPLPKVDLRLMQRPLGPVGVFGASNF
PLAFSVAGGDTASALAAGCPVIVKAHSAHPGTSELVGRAIQQAALKVGMPDGVFSLLH
GSGTEIGAALVQHPVIKAIGFTGSYQGGMALVKLAANRPEPIPVYAEMGSTNPVFILP
QIMKEKGAAIAQQFAASVTLGVGQFCTNPGMIIANKSEGYQPFLTDLETQFQSVSGGV
MLTGGIRKAYQEGIAKHLENESVDIVAKGIEGTGFTAVQPILFKTDARAIGEDHTLSE
EIFGPTSVLVEAESKEEMLRIAETMEGHLTATVHGTPEELVEYADLIDLLEQKVGRLL
INGFPTGVEVCHAMMHGGPFPASSDSRSTSVGTAAIYRFTRPVSYQNFPQALLPEELQ
DSNPLNIWRLVNGEFQKI"
gene complement(25771..26619)
/locus_tag="RUNSL_RS29170"
/old_locus_tag="Runsl_5756"
CDS complement(25771..26619)
/locus_tag="RUNSL_RS29170"
/old_locus_tag="Runsl_5756"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013762701.1"
/GO_function="GO:0003824 - catalytic activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="fumarylacetoacetate hydrolase family protein"
/protein_id="WP_013921781.1"
/translation="MKLYPTTQGIVIESDDTYYLSAQTDWDAYINRDDLFDAISEELK
SLSADPSLAESIKTDVLPPIRQQEVWASGVTYMKSREARMEESKDAGGGDFYARVYDA
DRPELFFKATAARTVGTGADVLIRRDSKWNVPEPELTLFATSNGKIVGYTCGNDMSSR
DIEGENPLYLPQAKSYDGAAAIGPCLYVPAQPIDPDAQIHIEIIRDGAAVFEGSISIN
RMKRTHTELIGYLFRETSFPHGVFLMTGTGLVPPNEFTLSVGDEVRITIQHIGTLINT
VAQKAL"
gene 26797..27663
/locus_tag="RUNSL_RS29175"
/old_locus_tag="Runsl_5757"
CDS 26797..27663
/locus_tag="RUNSL_RS29175"
/old_locus_tag="Runsl_5757"
/inference="COORDINATES: protein motif:HMM:NF024242.3"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="WP_041344214.1"
/translation="MQAILRKVNPSADYSFIARVDNLPFLYEKWHFHPEMELNYIVQS
RGTRFVGDSIEEFEEGDLTFLGSNLPHVWKNDTAYFLPDSPLRAKAKVIQFLPDCFGP
DFLKLKEMESIRRLFENAKRGLKIAGKTKEKIIPMIDQLIQNKSGIQRIGLFLTILEI
LAESEELTFLSSEGFLDSYHRFDTDTINRVYEFTLSQFNRRILIEEAAALAHMSVANF
CRYFKNRTQKTYVQFLTEVRIGYACRMLIENKKSIQQIAGDCGFHNLSNFNRAFKLLK
NQNPTAYRAAFG"
gene complement(27698..28681)
/locus_tag="RUNSL_RS29180"
/old_locus_tag="Runsl_5758"
CDS complement(27698..28681)
/locus_tag="RUNSL_RS29180"
/old_locus_tag="Runsl_5758"
/inference="COORDINATES: protein motif:HMM:NF013235.3"
/GO_function="GO:0003887 - DNA-directed DNA polymerase
activity [Evidence IEA]"
/GO_process="GO:0006270 - DNA replication initiation
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="replication initiation protein"
/protein_id="WP_169705275.1"
/translation="MKTPNSTFLHFMMKLKHYNRQPNGVVMTRQNFSLLEKRVFYIVM
NQISEADAEMKQNKYFKIPAKLITNNYRQILAMTQSLMRNCQIWLRNDEEQEFSAYNV
FSSAKYSAKEAIFEIGVSYEVLPHIAKIKSGYTEYELAIALSLNKTYSQRLYEILSRW
KNFNGGSWSEIAVDELRELISATEDTYDDFGQFKRRVLDPSQEEISAKTDLTFTYKIH
KTGRKVTHITFLIVTQESKALEELQEIREELGKMSMDDRWKYFQERMQAYDFTKSQRN
KIIQEEELANRFINADIEIQAGKRSPTNPTAYIAVILGFNESGKVKKAKNG"
gene 29760..30716
/locus_tag="RUNSL_RS29185"
/old_locus_tag="Runsl_5759"
CDS 29760..30716
/locus_tag="RUNSL_RS29185"
/old_locus_tag="Runsl_5759"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015026380.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParA family protein"
/protein_id="WP_013921784.1"
/translation="MINQKEVESFLKHNPALTVSALEKEAGIPKGTIAQALAGSRTLG
EKHLKALFPVLTKYGYSSSLYEKARVISVINHKGGVGKTTTTSSLGEALARRGFKVLL
IDLDPQGNLSQILGVENPDVQVAHALLNHAVRLPIIPIFENLYLSPSDIELADAEIQL
ILSVGGDLRLKNKLQPLLTDFEYILIDCPPSLNKLTISAMNASNSCLITLLPEMSAVK
GLNSLLQRVMEVKMNLNADLKVDGIVFTLVRKNSVHDGIKENVKENVPIRVFKTEIKH
LVDFQKSQILQRPIAKFSDNSEAAKNYRDFCDEFIDYLQIVK"
gene 30726..31676
/locus_tag="RUNSL_RS29190"
/old_locus_tag="Runsl_5760"
CDS 30726..31676
/locus_tag="RUNSL_RS29190"
/old_locus_tag="Runsl_5760"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013921785.1"
/translation="MAKLDFKNAIGEKTKQALNNSYISSEQIKQNIRVLEELRSFIPS
PTDEEWSQLEKNIVTNGCKDALLLWETTQAAIEPETLTPNAPVFVLVDGHNRYQICTT
RNISFNVQVMSFASLKEVKDYMIDLQLGRRNLSPQQASYFRGLRYNLEKSEKGKYDRN
KHKSQNGTYEENDPENHKSQNGTYDKNSLSTSRKLAKEYKVGRNTILRDAEFAAGLDK
LDTRLKNAVLSGEMKIGKSEIQKLAKVESTELIASEELEAILTSKESDPKVAKNADSS
IESAKKQLVKAFEKIKTSSEVSVKDVDKIIELAQKLKKML"
gene 31813..33606
/locus_tag="RUNSL_RS29195"
/old_locus_tag="Runsl_5761"
CDS 31813..33606
/locus_tag="RUNSL_RS29195"
/old_locus_tag="Runsl_5761"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_009282648.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="PQQ-dependent sugar dehydrogenase"
/protein_id="WP_013921786.1"
/translation="MKIRKLHPLLNRNYVSGSLFLAATLVLSAYSASSHSGDTNPSIR
QKKGTEEDIYATDAKIIARGQQVFESNCTACHNFLQKGIGPELSHVTSDVPAGWLKKM
IRNAPEMIKSGDARAAMLFDEYKQAMPAFPSLNETDLDAVLAFIHSKRKMEYATTAND
ALGTPVQNPIPQKIAMSGLQLTLDYFATAPATAQANPLARINKTLKLSGKKDRLFMLD
LRGKLYEMNGKELRVFMDIAKEIPSFIPAPGLGTGLGSFAFHPDFYSNGLFYTTHTEK
GKAATPDFGYADSIKVTLQWVLREWKVENPEAPAFAGKGRELFRVNMVSPIHGVQDIT
FNPLAKKGSSEYGLLYIGVGDGGATENGYYFLCNDKAHVWSSILRIDPRGTNSKNGRY
GIPADNPFAKETGAVGEVYCRGFRNPNRIVWAPDGKMLITDIGQTQIEELNIGKPGAD
YGWPEREGTFVLNPRGKMSVIYPLPQKDAALRYTYPVAQYDHDEGKAISGGFVYSASA
FPQLRGKYVFADVVNGRLFYVENNQLALGRQTEIQELELQFEGKQTTLQTLSGSAKAD
TRLGEGLNGELFIFTKSDGKIYRVSSCSSVK"
gene complement(33760..34263)
/locus_tag="RUNSL_RS29200"
/old_locus_tag="Runsl_5762"
CDS complement(33760..34263)
/locus_tag="RUNSL_RS29200"
/old_locus_tag="Runsl_5762"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015027250.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF6691 family protein"
/protein_id="WP_013921787.1"
/translation="MQSKAESSILDQDEQPFSCEASNEMQKPESWVANGKYLAIGILF
GIVFVKAEIISWFRIQEMFRFQSFHMYGVIGSAVVVGMISVFLIKKFNIKTISGEEIR
FHPKTFHRGQVYGGLIFGLGWAITGACPGPLFAQIGSGYPAVIVTLVSALAGTWIYGY
LRDKGKL"
gene complement(34285..34860)
/locus_tag="RUNSL_RS29205"
/old_locus_tag="Runsl_5763"
CDS complement(34285..34860)
/locus_tag="RUNSL_RS29205"
/old_locus_tag="Runsl_5763"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013931301.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="YeeE/YedE thiosulfate transporter family
protein"
/protein_id="WP_013921788.1"
/translation="MEQFIDLIRKPWPWYVAGPMIGLTVPTLLLIGNKSFGISSSLRH
ICAACFPGNLSFFKYNWKNEVWNLIFVLGIFLGGIIAANFLANPHVMVISESTITDLQ
ALGIRDFTGLMPSDLFTIDAIFSLKGFIFFIAGGFMVGFGTRYAGGCTSGHSIMGLSN
LQLPSLIATCCFMVGGFVTTHLLMPLIFKLF"
gene complement(35082..36050)
/locus_tag="RUNSL_RS29210"
/old_locus_tag="Runsl_5764"
CDS complement(35082..36050)
/locus_tag="RUNSL_RS29210"
/old_locus_tag="Runsl_5764"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018612417.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="YihY/virulence factor BrkB family protein"
/protein_id="WP_013921789.1"
/translation="MNRKITFRNLWEVLKNSFSGFMDDNVTKLGGSLAYFTVFSVGPM
LVVIISVCSIFLGREAIEGEIYAQLEGFLGKDTAAQLQDIIKKAAVSGKSTVAAVIGV
GTLLLGATGIFAEIQDSINRIWGIKAKPKKGWLKIIQNRFLSFSVIISLGFLLLVSLA
VTSVLDGFNQHLQAAFPDVTIVLFYIINQVVTFTVITILFGVIFKVLPDAKIIWKDVM
AGSMLTALLFMLGKFGISFYISKTEVGSTYGAAGSLAVLLVWIYYSSLILYFGAEFTK
AYALQFGSAIYPNDYAITVKEVEIENGKDSIQTNEKKKKQLADKGS"
gene complement(36084..36560)
/locus_tag="RUNSL_RS29215"
/old_locus_tag="Runsl_5765"
CDS complement(36084..36560)
/locus_tag="RUNSL_RS29215"
/old_locus_tag="Runsl_5765"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012779979.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CinA family protein"
/protein_id="WP_013921790.1"
/translation="MPSLLVIESSKLLKSHHLTIAFAESATAGRLSAEFALDENSGKI
LIGGLVCYDACVKEEILGIPVPFIEKYTPESAEVTKELAERLKKFMKSDIQVAVTGLT
APGGSETPQKPVGTMFIHLVMKDKSVGIREEFGGSPESIIMQTVDKVAELLIMHIV"
gene complement(36612..37460)
/locus_tag="RUNSL_RS29220"
/old_locus_tag="Runsl_5766"
CDS complement(36612..37460)
/locus_tag="RUNSL_RS29220"
/old_locus_tag="Runsl_5766"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_020596830.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="SDR family oxidoreductase"
/protein_id="WP_013921791.1"
/translation="MNSTTTTYSHLPGLTNRLTQKAVYIRETYKGSEKLQNKVALISG
GDSGIGKAVALHFAREGADIALIYHPTEEEDAYATKELIEKEHQKCLLICGDLLDPFI
PGQAVQAVMGRFGQIDILVNNAAVQRPNDDFTTLSDQQWEETFEVNVFACFRLTREAL
KYMKAGAAVINTASVLAYQGHGGLIDYAATKGALISFTRSLSQNLAAMGIRVNAVAPG
PVLTPLVTSTLSENTLADFGKDTPLQRAGQPCEVATAYVFLASQDSSYVSGQVLHPNG
GKIINT"
gene complement(37513..38133)
/locus_tag="RUNSL_RS29225"
/old_locus_tag="Runsl_5767"
CDS complement(37513..38133)
/locus_tag="RUNSL_RS29225"
/old_locus_tag="Runsl_5767"
/inference="COORDINATES: protein motif:HMM:NF012334.3"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="SDR family NAD(P)-dependent oxidoreductase"
/protein_id="WP_013921792.1"
/translation="MDNHSIIYALITRASSTIGESFARILAMEGYNLVLVDTHIDKLQ
NVAQIVKKDFPLANTICISKNLEHDSDSQELYKEVQQNNLNVELLINNEEIEYFAKNE
EIKNYAGKDGSYSNNKFLKHPLTILFLKEMMRKNKGKILHFVSTINRARTIYFSQHNF
DKPMVFSLVEIFQHKISEKLIELNILNAQIYSIKLNASDDLDLRAD"
CONTIG join(CP002864.1:1..38784)
//