GenomeNet

Database: RefSeq
Entry: NC_015695
LinkDB: NC_015695
Original site: NC_015695 
LOCUS       NC_015695              38784 bp    DNA     circular CON 17-SEP-2023
DEFINITION  Runella slithyformis DSM 19594 plasmid pRUNSL05, complete sequence.
ACCESSION   NC_015695
VERSION     NC_015695.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02232050
            Assembly: GCF_000218895.1
KEYWORDS    GSC:MIGS:2.1; RefSeq.
SOURCE      Runella slithyformis DSM 19594
  ORGANISM  Runella slithyformis DSM 19594
            Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
            Runella.
REFERENCE   1  (bases 1 to 38784)
  AUTHORS   Copeland,A., Zhang,X., Misra,M., Lapidus,A., Nolan,M., Lucas,S.,
            Deshpande,S., Cheng,J.F., Tapia,R., Goodwin,L.A., Pitluck,S.,
            Liolios,K., Pagani,I., Ivanova,N., Mikhailova,N., Pati,A., Chen,A.,
            Palaniappan,K., Land,M., Hauser,L., Pan,C., Jeffries,C.D.,
            Detter,J.C., Brambilla,E.M., Rohde,M., Djao,O.D., Goker,M.,
            Sikorski,J., Tindall,B.J., Woyke,T., Bristow,J., Eisen,J.A.,
            Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and
            Mavromatis,K.
  TITLE     Complete genome sequence of the aquatic bacterium Runella
            slithyformis type strain (LSU 4(T))
  JOURNAL   Stand Genomic Sci 6 (2), 145-154 (2012)
   PUBMED   22768358
REFERENCE   2  (bases 1 to 38784)
  AUTHORS   Lucas,S., Han,J., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S.,
            Peters,L., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G.,
            Zhang,X., Misra,M., Detter,J.C., Tapia,R., Han,C., Land,M.,
            Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T.,
            Wu,D., Tindall,B., Faehrich,R., Brambilla,E., Klenk,H.-P. and
            Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     The complete genome of plasmid 5 of Runella slithyformis DSM 19594
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 38784)
  AUTHORS   Lucas,S., Han,J., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S.,
            Peters,L., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G.,
            Zhang,X., Misra,M., Detter,J.C., Tapia,R., Han,C., Land,M.,
            Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T.,
            Wu,D., Tindall,B., Faehrich,R., Brambilla,E., Klenk,H.-P. and
            Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUN-2011) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CP002864.1.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 4087357
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
                      David Bruce (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Finishing done by JGI-LANL
            Annotation by JGI-ORNL and JGI-PGF
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##MIGS-Data-START##
            investigation_type  :: bacteria_archaea
            project_name        :: Runella slithyformis LSU4, DSM 19594
            collection_date     :: Missing
            lat_lon             :: 30.46788 -91.129604
            depth               :: Missing
            alt_elev            :: Missing
            country             :: USA
            environment         :: Fresh water, Host
            num_replicons       :: 6
            ref_biomaterial     :: DSM 19594, ATCC 29530, LMG 11500, NCIMB
                                   11436
            biotic_relationship :: Free living
            trophic_level       :: Missing
            rel_to_oxygen       :: Missing
            isol_growth_condt   :: Missing
            sequencing_meth     :: WGS
            assembly            :: Newbler v. 2.3 (pre-release)
            finishing_strategy  :: Finished
            GOLD Stamp ID       :: Gi04364
            Type Strain         :: Yes
            Funding Program     :: DOE-GEBA 2009
            Gene Calling Method :: Prodigal 1.4, GenePRIMP
            Isolation Site      :: Fresh water lake; USA, Louisiana, Baton
                                   Rouge
            Isolation Comments  :: isolated by JM Larkin for Louisiana State
                                   Univ
            Cell Shape          :: Rod-shaped
            Motility            :: Nonmotile
            Temperature Range   :: Psychrophile
            Gram Staining       :: Gram-
            Diseases            :: None
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Finished
            Current Finishing Status :: Finished
            Assembly Method          :: Newbler v. 2.3
            Genome Coverage          :: 30x
            Sequencing Technology    :: 454/Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 09/17/2023 15:10:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,868
            CDSs (total)                      :: 5,817
            Genes (coding)                    :: 5,798
            CDSs (with protein)               :: 5,798
            Genes (RNA)                       :: 51
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 9 of 19
            Pseudo Genes (incomplete)         :: 11 of 19
            Pseudo Genes (internal stop)      :: 3 of 19
            Pseudo Genes (multiple problems)  :: 4 of 19
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..38784
                     /organism="Runella slithyformis DSM 19594"
                     /mol_type="genomic DNA"
                     /strain="DSM 19594"
                     /isolation_source="fresh water lake"
                     /culture_collection="DSM:19594"
                     /type_material="type strain of Runella slithyformis"
                     /db_xref="taxon:761193"
                     /plasmid="pRUNSL05"
                     /country="USA"
                     /lat_lon="30.46788 N 91.129604 W"
                     /collected_by="JM Larkin"
     gene            140..1321
                     /locus_tag="RUNSL_RS29070"
                     /old_locus_tag="Runsl_5736"
     CDS             140..1321
                     /locus_tag="RUNSL_RS29070"
                     /old_locus_tag="Runsl_5736"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016197118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="WP_013921761.1"
                     /translation="MDPLMNDIVCFSHLRWNFVHQRPQHLLSRFANNSRIFFIEEPII
                     YEGMDKIELKSPHDNVYVVVPYLQSSLSTCAVERQKTLLVMLFRQQVIKNYLFWYYTP
                     QALTISDIFRPKLIVYDCMDELSAFKFAPIELKQKEKELFSKSDIIFTGGQSLFEAKK
                     NLHDAVYCFPSSIDKVHFGKARTCTKEPEDQAKIPFPRIGFYGVVDERFDIELLRQVS
                     DARPDWQFVIIGPIVKIDPTTLPKSDNIHYLGSKSYDELPLYLSGWDIATCMFARNES
                     TKYISPTKTPEYLAGGKPVISTNIKDVVDTYGKNDLVYIVENAQEFIESAEKELAKKD
                     KKVWLEKVDSFLMNNSWDITWASMMVLMRHKLNTKSALQRKSKILPQTVFENFSRNVA
                     I"
     gene            1373..3550
                     /locus_tag="RUNSL_RS29075"
                     /old_locus_tag="Runsl_5737"
     CDS             1373..3550
                     /locus_tag="RUNSL_RS29075"
                     /old_locus_tag="Runsl_5737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012407036.1"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="WP_013921762.1"
                     /translation="MVAKKSTFAIPDVWAGIECSFNRIGDSFSDQLVFSGHYERADDI
                     DQFAELGIKALHYPILWELHQPQKESVIQWDWIAAQLQKIQSHSITPIIGLLHHGSGP
                     AYTHLLDDDFATGLSSFAKKVATRFPELTHYKPINEPLTTARFSGLYGLWHPHAREDV
                     IFAKILLNQLKAIVLSMEEIRKINPEAKLIQTEDLSKTYSTPLLQYQADFENHRRWLT
                     YDILMGKLDRQHPLWSYFIGLGFSEKSLLFFQERPCIPDLLGVNHYVTSERFLDDDLS
                     RYPTHMHGGNGRHAYVDVEAIRVNHPHKAGLKVLLEELRDRYPAIDIALTEVHLHCTR
                     EEQLRWLKHTWDTCVELNAQGANIKALTVWALLGAFGWNKLLTQPGGDYESGIFDLRS
                     PSPRPTALAALVKALSNGCDFQHPVLKQKGWWEKESRFIHPLPHREKVFDFLPPTQPL
                     LVIGKNGTLGRAFGLLCQQRGIKYRLLSRQELDICDMQSIEAVFKSYRPWAVVNAAGY
                     ARIDSAELEPQKCFNDNVTGVKNLTQACKMWGVKLLTFSSSMVFDGMKTSPYLESDLV
                     SPLNTYGRSKVEAEKAVLEADCRALVIRTSLIFSPWDHLNFVGQIVTSLNRDEPLVCP
                     KNVFISPTYLPDLVHTALDLLIDDEIGIWHLTNQGEVNWAEFASDIARRTGNDTTLIN
                     RLSPERMAWKAPRPYYSVLGSEKGIFLPPLTHALDRYFMEKAG"
     gene            complement(3665..4189)
                     /locus_tag="RUNSL_RS29080"
                     /old_locus_tag="Runsl_5738"
     CDS             complement(3665..4189)
                     /locus_tag="RUNSL_RS29080"
                     /old_locus_tag="Runsl_5738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012024722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="WP_041344219.1"
                     /translation="MKTSSKSSDAENATGLRELFEDMLKDIYYAEKALTKALPKMADK
                     ATSGVLSDALLEHLSVTEGQVDRLEEVFEVLGLQPQAKKCEAIEGLIKEANEIIESTE
                     EGNVRDAGIIAGSQKVEHYEIASYGTLVTFAKTLGENEAAALLAETLQEEKEADIKLT
                     AIAESSINEEAAEE"
     gene            4459..5229
                     /locus_tag="RUNSL_RS29085"
                     /old_locus_tag="Runsl_5739"
     CDS             4459..5229
                     /locus_tag="RUNSL_RS29085"
                     /old_locus_tag="Runsl_5739"
                     /inference="COORDINATES: protein motif:HMM:NF013429.3"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="WP_041344211.1"
                     /translation="MTVREYAHLCKNQGLDGFDLGSILLKNHTPKYVSHLKKEIEEEG
                     IPLIMVTAYPDFTHPEALQRMREFDFLVHDIALASALGAKYLRVTAGQAHPGVSVAEG
                     IEWAINSLKKAAAVSDQYGITLVYENHAKPGVWEYMDFSNPPEIFLKIAEGLRNTSIG
                     INFDTANILVAGHETTLEVLEEVYDKVLTIHVADTASIGKMAPVALGTGLVPFREIFH
                     YLKEKEFNGWLCLEEFGNNGEEGVKQAIDFVRSTWIEA"
     gene            5307..5846
                     /locus_tag="RUNSL_RS29090"
                     /old_locus_tag="Runsl_5740"
     CDS             5307..5846
                     /locus_tag="RUNSL_RS29090"
                     /old_locus_tag="Runsl_5740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011583820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="WP_013921765.1"
                     /translation="MKSTHVIATVVAASAVAIALSSFVKIPKGAIAVKPFDQKKYLGK
                     WYEIARLDYKWEKNLDNVTATYSLKENGDIKVDNRGYNFKKEKWEESIGKAKPVADPE
                     EARLKVSFFGPFYAGYNVIALDKDYKYALVVGDNTRYMWILSREKTIPETIKQDYLAQ
                     AKALGFRTEELVWVNHDKN"
     gene            complement(5984..6844)
                     /locus_tag="RUNSL_RS29095"
                     /old_locus_tag="Runsl_5741"
     CDS             complement(5984..6844)
                     /locus_tag="RUNSL_RS29095"
                     /old_locus_tag="Runsl_5741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015813695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="WP_013921766.1"
                     /translation="MKTLLIALSLLCTIAAFGQKKAETPEWKQLFNGKNLDGWDVKIR
                     GYGLNDNYGNTFRVEDGKMVVRYDQYDDFKQKYGHIFYKGDFSYYRVAVEYRFVGEQA
                     PKGEGWAWRNSGIMVHGQPAATMGKDQDFPASIEVQLLGGNEKKRTTCNLCTPGTNVV
                     MDGKLITQHCINSTSQTYNGDQWVRAEVLVLGDSLIQHFVNGEKVLEYNKPQLGGGNV
                     SGHDPALMISGKLLDHGSISLQSESHPVEFRKVELLELKGCMDPKAKNFKSYYVKEDN
                     STCVYGRKKK"
     gene            complement(6929..9571)
                     /locus_tag="RUNSL_RS29100"
                     /old_locus_tag="Runsl_5742"
     CDS             complement(6929..9571)
                     /locus_tag="RUNSL_RS29100"
                     /old_locus_tag="Runsl_5742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009285408.1"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="WP_041344213.1"
                     /translation="MLKVTYTFFSAFLFLFLAGTRPWQSEPSQQYSVAARADSLRNAS
                     EWPEELIVTNFSSADLTPSPACLAVAPTGEVYVGVDMIGSLGKKPGKGSIVRLVDSDN
                     DGKMDRHTTYAMVDNPRGILPVGDRLYVLHTQFSKETGIASGMDLVVFEDKNHDGMAD
                     GPSVPIIEHISSPKFLQSRGTDHATNGIRMGIDGWIYIAVGDFGFHNATDRSGKKLTM
                     LGGGIVRVRPDGTEMEVYTHGLRNIYDVAIDPFMNIFARGNTNDGGGWNIRFSHQIQS
                     GEYGYPVLFKHFTDEIIPALVDLGGGSGTGALFMDDDTWPANYNNVPMMADWGRSQLY
                     IHRLSPDGAGFTQKEEKFIKLAQITDVDIDASGRAYLSAWDGAGYSGNASKGFVVRAV
                     PNNWKYRPFADLKKASVKKLTSLLKSGSGVARLAAQQELLTRPANKTAKPVWKIVTDG
                     KLPLAVRVAGLYTYAQAAGTDGIENLVTLTSDKDLQEFALRALADRKPKLSTVPIEPF
                     LNGLKAASPRVQIAAAVGLGRLGRPEAAEALVQVSVPGSFAAPAIGTEGPHATPNSAI
                     IPPHIAVRSLVSLHAVDACVKAIGTANSTIALWALRYMHDPKAVAGLLNAYQRTNDET
                     LKKQIIITLSRLYKKEADYDGSWWWSTRPDTHGPYYKAITWESSADIKDFLTKEWSKS
                     ADKKFFVDLNSRHRMEIPEFGAEEPVAVKEEIKVDLEKIRNKKGQIGEASIEDVMLAM
                     AKIPGDAALGKTLFTQQGCIACHSLSKGETMKGPFMGQIGSIMNREQIAESILKPNAS
                     ISQGFSSVLITAKRNKSYMGFITEESASKVVLRDITGQVFTIKTSDIVSRKEMETSMM
                     PSGLANALSYEEFASLLSFLSQQK"
     gene            complement(9718..10542)
                     /locus_tag="RUNSL_RS29105"
                     /old_locus_tag="Runsl_5743"
     CDS             complement(9718..10542)
                     /locus_tag="RUNSL_RS29105"
                     /old_locus_tag="Runsl_5743"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020606035.1"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="WP_013921768.1"
                     /translation="MKKYLSLIVLVGLFSFFSAKKIVWVAIGDSITYLNEHPNETGNR
                     ITKGYMTRVVEKLPEIEYINQGHNGWTSGRIAEKIEELNLVKADVYSVFLGTNDWWAG
                     RPLGTFADYENNTGNGTVYGSFRLIINKLRGLNKDAKIILITPMQRADFVYIANMKNN
                     AYGSYKDKKGQTLAQFAEAINTIGKYEHFPMVDLYHDRKLKLKHLVEYKRLKDPQTGQ
                     YRNYRYPEFIDIPFNPETDEYPYPVEAIDMTYDGLHPSDKGYEVIAKKLIKTLKNQ"
     gene            complement(10557..12509)
                     /locus_tag="RUNSL_RS29110"
                     /old_locus_tag="Runsl_5744"
     CDS             complement(10557..12509)
                     /locus_tag="RUNSL_RS29110"
                     /old_locus_tag="Runsl_5744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015809511.1"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="WP_229599843.1"
                     /translation="MNSSTPKSHPLTNSLRTFIAPLSVAFLLLFLTTGAFAQLSKIRE
                     DSLYIRQHYTKIERMIPMRDGVKLFASIYVPKDVATGAKYPIMLNRTPYSSAPYGDTL
                     YKLSLGPSMHFAHDGYIFVYQDVRGKYMSEGDFEAYRPFIAKKKNKTDNDESSDAYDT
                     IEWLIKNVEGNNGRVGTWGISAPGYYTTMTNIEAHPALKASSPQAPVTDWYMGDDRHH
                     NGAFFLMGTFSFISSYGAPRPTPSPRGRPGFSAYGTPDGYEFYKNLGPLKNVNEKIFK
                     GENRIWNQLMEHETYDEFWQSRTPVPHLKNIKPAVMVVGGWFDQEDLYGPLKTYQGIE
                     NNKPTSPNLLVMGPWIHGGWSRGTGESLGHIRFGSKTSEFYQKEIEFPFFNHYLKDKP
                     NPELPKAYIFETGANEWRKYDQWPPKNAVEKKLYLHPNRKLSFSPTVTTMEAGAKPVF
                     NEYLSDPDKPVPYTAEIRNIRGSDFMYEDQRFAATRPDVLVYESDVLTEDVIIAGNVM
                     ANLFVSTTGTDADFVVKLIDVYPGNAPNDSPENPRKAMGGFQLLVRGEVMRSKFRKSF
                     STPEAMVPNKMENVRFDMQDAAHRFKKGHKIMIQIQSSWFPLVDRNPQKFVNIYKAEA
                     ADFQKAYHRVYSSGVGSSYISVRVVE"
     gene            complement(12637..13833)
                     /locus_tag="RUNSL_RS29115"
                     /old_locus_tag="Runsl_5745"
     CDS             complement(12637..13833)
                     /locus_tag="RUNSL_RS29115"
                     /old_locus_tag="Runsl_5745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019991306.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="WP_229599844.1"
                     /translation="MKRPPMMLQRIAQQEKITKTGGNAVLSVSQLVSYFEAWLKKPNN
                     YPRIARAYVLYCLDHNFGIDSVSLSLYAAGKKGNVVSPARKFLKFYIQQGQPRIVADA
                     PASSKVSPAANELILGYLADATHLRGDQSRENYTKALNAFFEYIQAETEAGRPASFST
                     LTVGQYIHFLRGKSLSAFTINFYLSVIKQLTLWVIKNRNRLNLSAEQLEDLHEIGSIR
                     GLRIERGFYKESLSENELAELLISIEDPTDRTIVALLGIEGLRTVEVCRLLIGDVDLA
                     RGQLWVLGKGKHTKKAVKLFEACAESLCRYMTGVNAPGNTPLFPDLKTAQIRYRVDKY
                     LKASGLKRPKVSAHSLRHTVGQLLIEKGVEPIHVQRHLRHELFETTQFYIKKQTEKEY
                     LKKMPD"
     gene            complement(13917..15113)
                     /locus_tag="RUNSL_RS29120"
                     /old_locus_tag="Runsl_5746"
     CDS             complement(13917..15113)
                     /locus_tag="RUNSL_RS29120"
                     /old_locus_tag="Runsl_5746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015031172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="WP_013921771.1"
                     /translation="MEKLFSFQDNLLRSVTTDFKRYLYDEISFESRMLAIKGIRGVGK
                     TTLLLQYLKTQNASKSLYVTADHPWFYTNGLLDTAEEWHKQGGKLLIIDEVHKYANWS
                     AELKNIYDGFPDLQVIFTASSALDIYRGEADLSRRVLSYSLHGLSFREYLSINNIYTF
                     QPVSLENILENSRQLCVEILEKIEAPLVYFKKYLRSGYLPFGTRETKEEDYLARVYQI
                     VDATLAYDLAFINDYSAVHQSKIKKLLGILAETVPFIPNITELAATLQVSRNTLLLLL
                     EHLDRGALITKISKTGKGTSLLQKPDKIILENTNFSYALSQQPVEGTLRETFFVNQLR
                     NKGYKVEVAEEGDFLVDGRFTFEVGGKSKKQKQIKEVENAFLVKDNINSAYGNVIPVW
                     LFGFLY"
     gene            15268..16335
                     /gene="dinB"
                     /locus_tag="RUNSL_RS29125"
                     /old_locus_tag="Runsl_5747"
     CDS             15268..16335
                     /gene="dinB"
                     /locus_tag="RUNSL_RS29125"
                     /old_locus_tag="Runsl_5747"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015028661.1"
                     /GO_function="GO:0003684 - damaged DNA binding [Evidence
                     IEA]"
                     /GO_function="GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="WP_013921772.1"
                     /translation="MNRKIIHIDMDAFYASVEQRDDPSLRGKPVAVGGSSDRGVVAAA
                     SYEARKYGVRSAMSSKVAARKCPALIFVKPRFEVYKYVSEQIRGIFAEFTPLIEPLSL
                     DEAYLDVTENLKKMRSATLIAQEIKQRIVETTQLTASAGVSYNKFLAKLASDFRKPNG
                     IYVIGPDEGEAFVANLTVNKFHGIGKVTAEKMNQLGIQTGMDLKSKTEFFLRTHFGKM
                     GSYYYNIARGIDQRPVEADRIRKSVGSENTFDRDLETLAEMEGGLLPLIEDVWKWCTR
                     TQIYGRTATLKIKFNDFQMITRSQSAFLPIREKALFEKIIFELLNKNFPTDKPVRLLG
                     VSIHNLEVTHPTEGQQLTLNF"
     gene            16515..17372
                     /locus_tag="RUNSL_RS29130"
                     /old_locus_tag="Runsl_5748"
     CDS             16515..17372
                     /locus_tag="RUNSL_RS29130"
                     /old_locus_tag="Runsl_5748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019990013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="WP_013921773.1"
                     /translation="MTNRRSFLKNTVATIALAGPAAASVQASQPEAQASEDLFKLGIA
                     GYSFVHFKLDQALEMMKKVDVHYLCIKDFHLPFNSTDEQIATFHATLKNSGVTGYAVG
                     PIYMKTTQEIDNGFAYAKRVGVKLIVGVPNEDLLPYIDKKVKEYDMRYAIHIHGPDIK
                     LWPNASSVIDAVKNLDARIGLCFDMGHDARFGDDPIADLEKYQKRIFDIHLKNVTAAS
                     KEGKTCELGRGIIDIPAFVAMLRKIKYTGSCSLEYEKDMKDPLAGIAESVGYFKGVCD
                     ASKSGKRKV"
     gene            17414..18757
                     /locus_tag="RUNSL_RS29135"
                     /old_locus_tag="Runsl_5749"
     CDS             17414..18757
                     /locus_tag="RUNSL_RS29135"
                     /old_locus_tag="Runsl_5749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019990014.1"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="WP_013921774.1"
                     /translation="MENSRREFIKKAALSTAGLTFGGLATGMSAKSYAKIIGANDRIN
                     VAILGLGRRLGAYFEPIGLKSSNVELIYLCDVMKKQRESAAQKFSKYITYTPKLENDF
                     RKVFADKQVDAIFNATPDHWHAPGTWMAVQAGKHVYVEKPCSHNPREGEILGECQRKY
                     GKVIQMGNQQRSAPESIDIIQQIHNGAIGTPYKAVAFYASARGEVPVPKKAPVPDGLD
                     WELFQGPAPRREYTHDTWDYNWHWYGWDYGTAESGNNATHELDVARWALQVDFPEYVT
                     VEAAKRSFLEDGWTMYDTMDAMFRFPGNKIIKWDGKSRNGHKTYGSDRGTVIYGSTGS
                     VYVDRDGYKLFNRDGKVIKERKASGSEAGTALGGGGDMTTLHVVNFFDAIRGKAKQAS
                     PIEEGAKSTLLSHLANIAYRTNKSFDVDSKNGHIKDKEAMKLWSREYEKGWEPKI"
     gene            complement(18912..19880)
                     /gene="gguC"
                     /locus_tag="RUNSL_RS29140"
                     /old_locus_tag="Runsl_5750"
     CDS             complement(18912..19880)
                     /gene="gguC"
                     /locus_tag="RUNSL_RS29140"
                     /old_locus_tag="Runsl_5750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018917157.1"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraD1 family protein"
                     /protein_id="WP_013921775.1"
                     /translation="MRLLQFLDSENKPRTGIVNGARIQLLASVNTVYELFHDAVRQGV
                     SPEERAAQLAGNQYAEYEKLIQDKRLLLPLMHPDPYHTWVSGTGLTHLGSAASRNAMH
                     EKMSKTNASELTDSMKIFKMGLENGKMQSGVPASQPEWFYKGNGLMAVPPGHDIPSPA
                     FALDGGEEPEMVGLYIVDAQGNPQRIGFAVGNEFSDHKMERINYLYLAHSKLRHCSYG
                     PEILLGNPPDSITGTTRIVRGNAVLWEKEFLTGEANMSHNLANLEHHHFKYSMFRQPG
                     DVHIHFFGTSVLSFADGIETRDGDIFEIKAEGFGEPLRNRLSVQKG"
     gene            complement(19995..20426)
                     /locus_tag="RUNSL_RS29145"
                     /old_locus_tag="Runsl_5751"
     CDS             complement(19995..20426)
                     /locus_tag="RUNSL_RS29145"
                     /old_locus_tag="Runsl_5751"
                     /inference="COORDINATES: protein motif:HMM:NF022072.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="WP_041344221.1"
                     /translation="MKINENAPVKQKNQIVINAVPEKVWAVLTDINQWGSWNEKITEA
                     QASETQKVGARFDWKVNGASIKSILHTVSTHKAFGWSGTTFGGSAIHNWFLTAHQAGT
                     LVNVEESMEGWLVSLFKNKMNRDLAKDMQFWLEMLKRECEK"
     gene            complement(20498..21082)
                     /locus_tag="RUNSL_RS29150"
                     /old_locus_tag="Runsl_5752"
     CDS             complement(20498..21082)
                     /locus_tag="RUNSL_RS29150"
                     /old_locus_tag="Runsl_5752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018473421.1"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0030552 - cAMP binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="WP_013921777.1"
                     /translation="MDNAFENYIQSYFGVPAETVAEIVSYFRPQSLVKGDFFLKEGAH
                     CDKMGFVQSGIVREYLTDEHGREVTKWISTQGYFVVDIAGFLFQSPARWNLQALSDCE
                     LLVIHKSDYAQISQKVPQWPQLEKLFIARCFTILEQRIVTHLSLSSEERYALFFSHYR
                     ELFNLVPLQYLASMLGMTPETFSRIRNKWAKKSS"
     gene            21205..22392
                     /locus_tag="RUNSL_RS29155"
                     /old_locus_tag="Runsl_5753"
     CDS             21205..22392
                     /locus_tag="RUNSL_RS29155"
                     /old_locus_tag="Runsl_5753"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="WP_013921778.1"
                     /translation="MSKIYDVIVIGRGLFGCPAAKYLQMDGLETLLIGPKEPAASEYD
                     RARVFSSHYDSGRVTRKIGKTKDWSRLNAQTQAAFKTIEAQSGMHFFGNEGCLYISDL
                     LPDDHFDKAVRHQLLSKEESDFAIIEEEQLPELFPFFRFRKPSVAYLEKALSGHLNPR
                     RLIEAQLKIFTESGGETVDEVVESVIDKGDIYEVSTANGQRFKAKKILYATGVFHPFF
                     GFNTPTIPLEIKTETIALAEVSKEQAAGLQSMPSLLYTCKTETYDEIYAIRPVLYPTG
                     RYFLKLGANLTDDRFLTRIEDIKKWFCSPPLPQQEEVLKKMTVELFPTIPFLSFQVKH
                     CIIEYTQSRRPLIDKVGREQYICTGGNGYGAMCSDAMGRLGALCVQGKDFQEGFSAGF
                     FAL"
     gene            complement(22440..24092)
                     /locus_tag="RUNSL_RS29160"
                     /old_locus_tag="Runsl_5754"
     CDS             complement(22440..24092)
                     /locus_tag="RUNSL_RS29160"
                     /old_locus_tag="Runsl_5754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015028615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase family protein"
                     /protein_id="WP_013921779.1"
                     /translation="MHTYLSVHPKDNVLVALQNLPKGTAIEYNGQSFDLIMDIPSKHK
                     FVTEDLAAGDHVTMYGVLVGKATQPIRRGEQVTTFNLKHDSDEYSVSKRKPYPEWQAP
                     DVSKWQGRTFMGYHRSDGQVGTANYWLVVPLVFCENRNILKLKDAFDKALGYAFPDIY
                     LQQTQELVQLYQTQKSDGIAAYTPSFTSEKPVIKPLFPNLDGIKFLTHESGCGENNQD
                     SALLAALFGAYANNANVAGITVLSLGCQKTQFEDLTNEIKSRNPLFDKPILFYEQQAY
                     GTEFDMLSAAIKGTFQALIEANKLERRPAPLSKLNIGLKCGGSDGFSGISANPVLGHL
                     SDIVVALNGRTYLAEFPELCGVEQELIDRCADEEKAEKFETLMRQYASKAEAVGAGFD
                     MNPSAGNIKDGLITDAIKSAGAAKKGGTAPIADVLNYTEVSKVPGLHLVCTPGNDVLA
                     TTGQAAAGATITLFTTGLGTPTGNPICPMVKVATNSKLAQKMSDIIDFDCGPIIVGEK
                     TIEQTAEELLEYCIELASGTFKTKAQLLGQDDFMPWKRGVSL"
     gene            complement(24188..25768)
                     /locus_tag="RUNSL_RS29165"
                     /old_locus_tag="Runsl_5755"
     CDS             complement(24188..25768)
                     /locus_tag="RUNSL_RS29165"
                     /old_locus_tag="Runsl_5755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015028634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase (NADP(+))"
                     /protein_id="WP_013921780.1"
                     /translation="MNLEGKQLIGFTVSSEGESVFQAPNPSTGETLPTQFHKATKAEL
                     ESAAQKAQAAFKVYRKKSGIEKAIFLEKIAEEIEAIGDDLVQIATAETGLPAGRIQGE
                     RGRTTGQLRLFAQLLREGSWVNARIETAIPDRQPLPKVDLRLMQRPLGPVGVFGASNF
                     PLAFSVAGGDTASALAAGCPVIVKAHSAHPGTSELVGRAIQQAALKVGMPDGVFSLLH
                     GSGTEIGAALVQHPVIKAIGFTGSYQGGMALVKLAANRPEPIPVYAEMGSTNPVFILP
                     QIMKEKGAAIAQQFAASVTLGVGQFCTNPGMIIANKSEGYQPFLTDLETQFQSVSGGV
                     MLTGGIRKAYQEGIAKHLENESVDIVAKGIEGTGFTAVQPILFKTDARAIGEDHTLSE
                     EIFGPTSVLVEAESKEEMLRIAETMEGHLTATVHGTPEELVEYADLIDLLEQKVGRLL
                     INGFPTGVEVCHAMMHGGPFPASSDSRSTSVGTAAIYRFTRPVSYQNFPQALLPEELQ
                     DSNPLNIWRLVNGEFQKI"
     gene            complement(25771..26619)
                     /locus_tag="RUNSL_RS29170"
                     /old_locus_tag="Runsl_5756"
     CDS             complement(25771..26619)
                     /locus_tag="RUNSL_RS29170"
                     /old_locus_tag="Runsl_5756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013762701.1"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="WP_013921781.1"
                     /translation="MKLYPTTQGIVIESDDTYYLSAQTDWDAYINRDDLFDAISEELK
                     SLSADPSLAESIKTDVLPPIRQQEVWASGVTYMKSREARMEESKDAGGGDFYARVYDA
                     DRPELFFKATAARTVGTGADVLIRRDSKWNVPEPELTLFATSNGKIVGYTCGNDMSSR
                     DIEGENPLYLPQAKSYDGAAAIGPCLYVPAQPIDPDAQIHIEIIRDGAAVFEGSISIN
                     RMKRTHTELIGYLFRETSFPHGVFLMTGTGLVPPNEFTLSVGDEVRITIQHIGTLINT
                     VAQKAL"
     gene            26797..27663
                     /locus_tag="RUNSL_RS29175"
                     /old_locus_tag="Runsl_5757"
     CDS             26797..27663
                     /locus_tag="RUNSL_RS29175"
                     /old_locus_tag="Runsl_5757"
                     /inference="COORDINATES: protein motif:HMM:NF024242.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="WP_041344214.1"
                     /translation="MQAILRKVNPSADYSFIARVDNLPFLYEKWHFHPEMELNYIVQS
                     RGTRFVGDSIEEFEEGDLTFLGSNLPHVWKNDTAYFLPDSPLRAKAKVIQFLPDCFGP
                     DFLKLKEMESIRRLFENAKRGLKIAGKTKEKIIPMIDQLIQNKSGIQRIGLFLTILEI
                     LAESEELTFLSSEGFLDSYHRFDTDTINRVYEFTLSQFNRRILIEEAAALAHMSVANF
                     CRYFKNRTQKTYVQFLTEVRIGYACRMLIENKKSIQQIAGDCGFHNLSNFNRAFKLLK
                     NQNPTAYRAAFG"
     gene            complement(27698..28681)
                     /locus_tag="RUNSL_RS29180"
                     /old_locus_tag="Runsl_5758"
     CDS             complement(27698..28681)
                     /locus_tag="RUNSL_RS29180"
                     /old_locus_tag="Runsl_5758"
                     /inference="COORDINATES: protein motif:HMM:NF013235.3"
                     /GO_function="GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="WP_169705275.1"
                     /translation="MKTPNSTFLHFMMKLKHYNRQPNGVVMTRQNFSLLEKRVFYIVM
                     NQISEADAEMKQNKYFKIPAKLITNNYRQILAMTQSLMRNCQIWLRNDEEQEFSAYNV
                     FSSAKYSAKEAIFEIGVSYEVLPHIAKIKSGYTEYELAIALSLNKTYSQRLYEILSRW
                     KNFNGGSWSEIAVDELRELISATEDTYDDFGQFKRRVLDPSQEEISAKTDLTFTYKIH
                     KTGRKVTHITFLIVTQESKALEELQEIREELGKMSMDDRWKYFQERMQAYDFTKSQRN
                     KIIQEEELANRFINADIEIQAGKRSPTNPTAYIAVILGFNESGKVKKAKNG"
     gene            29760..30716
                     /locus_tag="RUNSL_RS29185"
                     /old_locus_tag="Runsl_5759"
     CDS             29760..30716
                     /locus_tag="RUNSL_RS29185"
                     /old_locus_tag="Runsl_5759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015026380.1"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="WP_013921784.1"
                     /translation="MINQKEVESFLKHNPALTVSALEKEAGIPKGTIAQALAGSRTLG
                     EKHLKALFPVLTKYGYSSSLYEKARVISVINHKGGVGKTTTTSSLGEALARRGFKVLL
                     IDLDPQGNLSQILGVENPDVQVAHALLNHAVRLPIIPIFENLYLSPSDIELADAEIQL
                     ILSVGGDLRLKNKLQPLLTDFEYILIDCPPSLNKLTISAMNASNSCLITLLPEMSAVK
                     GLNSLLQRVMEVKMNLNADLKVDGIVFTLVRKNSVHDGIKENVKENVPIRVFKTEIKH
                     LVDFQKSQILQRPIAKFSDNSEAAKNYRDFCDEFIDYLQIVK"
     gene            30726..31676
                     /locus_tag="RUNSL_RS29190"
                     /old_locus_tag="Runsl_5760"
     CDS             30726..31676
                     /locus_tag="RUNSL_RS29190"
                     /old_locus_tag="Runsl_5760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_013921785.1"
                     /translation="MAKLDFKNAIGEKTKQALNNSYISSEQIKQNIRVLEELRSFIPS
                     PTDEEWSQLEKNIVTNGCKDALLLWETTQAAIEPETLTPNAPVFVLVDGHNRYQICTT
                     RNISFNVQVMSFASLKEVKDYMIDLQLGRRNLSPQQASYFRGLRYNLEKSEKGKYDRN
                     KHKSQNGTYEENDPENHKSQNGTYDKNSLSTSRKLAKEYKVGRNTILRDAEFAAGLDK
                     LDTRLKNAVLSGEMKIGKSEIQKLAKVESTELIASEELEAILTSKESDPKVAKNADSS
                     IESAKKQLVKAFEKIKTSSEVSVKDVDKIIELAQKLKKML"
     gene            31813..33606
                     /locus_tag="RUNSL_RS29195"
                     /old_locus_tag="Runsl_5761"
     CDS             31813..33606
                     /locus_tag="RUNSL_RS29195"
                     /old_locus_tag="Runsl_5761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009282648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="WP_013921786.1"
                     /translation="MKIRKLHPLLNRNYVSGSLFLAATLVLSAYSASSHSGDTNPSIR
                     QKKGTEEDIYATDAKIIARGQQVFESNCTACHNFLQKGIGPELSHVTSDVPAGWLKKM
                     IRNAPEMIKSGDARAAMLFDEYKQAMPAFPSLNETDLDAVLAFIHSKRKMEYATTAND
                     ALGTPVQNPIPQKIAMSGLQLTLDYFATAPATAQANPLARINKTLKLSGKKDRLFMLD
                     LRGKLYEMNGKELRVFMDIAKEIPSFIPAPGLGTGLGSFAFHPDFYSNGLFYTTHTEK
                     GKAATPDFGYADSIKVTLQWVLREWKVENPEAPAFAGKGRELFRVNMVSPIHGVQDIT
                     FNPLAKKGSSEYGLLYIGVGDGGATENGYYFLCNDKAHVWSSILRIDPRGTNSKNGRY
                     GIPADNPFAKETGAVGEVYCRGFRNPNRIVWAPDGKMLITDIGQTQIEELNIGKPGAD
                     YGWPEREGTFVLNPRGKMSVIYPLPQKDAALRYTYPVAQYDHDEGKAISGGFVYSASA
                     FPQLRGKYVFADVVNGRLFYVENNQLALGRQTEIQELELQFEGKQTTLQTLSGSAKAD
                     TRLGEGLNGELFIFTKSDGKIYRVSSCSSVK"
     gene            complement(33760..34263)
                     /locus_tag="RUNSL_RS29200"
                     /old_locus_tag="Runsl_5762"
     CDS             complement(33760..34263)
                     /locus_tag="RUNSL_RS29200"
                     /old_locus_tag="Runsl_5762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015027250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6691 family protein"
                     /protein_id="WP_013921787.1"
                     /translation="MQSKAESSILDQDEQPFSCEASNEMQKPESWVANGKYLAIGILF
                     GIVFVKAEIISWFRIQEMFRFQSFHMYGVIGSAVVVGMISVFLIKKFNIKTISGEEIR
                     FHPKTFHRGQVYGGLIFGLGWAITGACPGPLFAQIGSGYPAVIVTLVSALAGTWIYGY
                     LRDKGKL"
     gene            complement(34285..34860)
                     /locus_tag="RUNSL_RS29205"
                     /old_locus_tag="Runsl_5763"
     CDS             complement(34285..34860)
                     /locus_tag="RUNSL_RS29205"
                     /old_locus_tag="Runsl_5763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013931301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="WP_013921788.1"
                     /translation="MEQFIDLIRKPWPWYVAGPMIGLTVPTLLLIGNKSFGISSSLRH
                     ICAACFPGNLSFFKYNWKNEVWNLIFVLGIFLGGIIAANFLANPHVMVISESTITDLQ
                     ALGIRDFTGLMPSDLFTIDAIFSLKGFIFFIAGGFMVGFGTRYAGGCTSGHSIMGLSN
                     LQLPSLIATCCFMVGGFVTTHLLMPLIFKLF"
     gene            complement(35082..36050)
                     /locus_tag="RUNSL_RS29210"
                     /old_locus_tag="Runsl_5764"
     CDS             complement(35082..36050)
                     /locus_tag="RUNSL_RS29210"
                     /old_locus_tag="Runsl_5764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018612417.1"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="WP_013921789.1"
                     /translation="MNRKITFRNLWEVLKNSFSGFMDDNVTKLGGSLAYFTVFSVGPM
                     LVVIISVCSIFLGREAIEGEIYAQLEGFLGKDTAAQLQDIIKKAAVSGKSTVAAVIGV
                     GTLLLGATGIFAEIQDSINRIWGIKAKPKKGWLKIIQNRFLSFSVIISLGFLLLVSLA
                     VTSVLDGFNQHLQAAFPDVTIVLFYIINQVVTFTVITILFGVIFKVLPDAKIIWKDVM
                     AGSMLTALLFMLGKFGISFYISKTEVGSTYGAAGSLAVLLVWIYYSSLILYFGAEFTK
                     AYALQFGSAIYPNDYAITVKEVEIENGKDSIQTNEKKKKQLADKGS"
     gene            complement(36084..36560)
                     /locus_tag="RUNSL_RS29215"
                     /old_locus_tag="Runsl_5765"
     CDS             complement(36084..36560)
                     /locus_tag="RUNSL_RS29215"
                     /old_locus_tag="Runsl_5765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="WP_013921790.1"
                     /translation="MPSLLVIESSKLLKSHHLTIAFAESATAGRLSAEFALDENSGKI
                     LIGGLVCYDACVKEEILGIPVPFIEKYTPESAEVTKELAERLKKFMKSDIQVAVTGLT
                     APGGSETPQKPVGTMFIHLVMKDKSVGIREEFGGSPESIIMQTVDKVAELLIMHIV"
     gene            complement(36612..37460)
                     /locus_tag="RUNSL_RS29220"
                     /old_locus_tag="Runsl_5766"
     CDS             complement(36612..37460)
                     /locus_tag="RUNSL_RS29220"
                     /old_locus_tag="Runsl_5766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020596830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="WP_013921791.1"
                     /translation="MNSTTTTYSHLPGLTNRLTQKAVYIRETYKGSEKLQNKVALISG
                     GDSGIGKAVALHFAREGADIALIYHPTEEEDAYATKELIEKEHQKCLLICGDLLDPFI
                     PGQAVQAVMGRFGQIDILVNNAAVQRPNDDFTTLSDQQWEETFEVNVFACFRLTREAL
                     KYMKAGAAVINTASVLAYQGHGGLIDYAATKGALISFTRSLSQNLAAMGIRVNAVAPG
                     PVLTPLVTSTLSENTLADFGKDTPLQRAGQPCEVATAYVFLASQDSSYVSGQVLHPNG
                     GKIINT"
     gene            complement(37513..38133)
                     /locus_tag="RUNSL_RS29225"
                     /old_locus_tag="Runsl_5767"
     CDS             complement(37513..38133)
                     /locus_tag="RUNSL_RS29225"
                     /old_locus_tag="Runsl_5767"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="WP_013921792.1"
                     /translation="MDNHSIIYALITRASSTIGESFARILAMEGYNLVLVDTHIDKLQ
                     NVAQIVKKDFPLANTICISKNLEHDSDSQELYKEVQQNNLNVELLINNEEIEYFAKNE
                     EIKNYAGKDGSYSNNKFLKHPLTILFLKEMMRKNKGKILHFVSTINRARTIYFSQHNF
                     DKPMVFSLVEIFQHKISEKLIELNILNAQIYSIKLNASDDLDLRAD"
CONTIG      join(CP002864.1:1..38784)
//
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