LOCUS NC_017048 1111969 bp DNA circular BCT 25-DEC-2012
DEFINITION Rickettsia prowazekii str. GvV257 chromosome, complete genome.
ACCESSION NC_017048
VERSION NC_017048.1 GI:383486602
DBLINK Project: 158051
BioProject: PRJNA158051
KEYWORDS .
SOURCE Rickettsia prowazekii str. GvV257
ORGANISM Rickettsia prowazekii str. GvV257
Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
Rickettsiaceae; Rickettsieae; Rickettsia; typhus group.
REFERENCE 1 (bases 1 to 1111969)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2012) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 2 (bases 1 to 1111969)
AUTHORS Johnson,S.L., Sims,D., Han,S., Bruce,D.C. and Dasch,G.A.
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2012) Genome Science B6, Los Alamos National
Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to CP003395.
Annotation was added by the NCBI Prokaryotic Genomes Automatic
Annotation Pipeline Group. Information about the Pipeline can be
found here:
http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
aware that the annotation is done automatically with little or no
manual curation.
Minor corrections made by submitter.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1111969
/organism="Rickettsia prowazekii str. GvV257"
/mol_type="genomic DNA"
/strain="GvV257"
/db_xref="taxon:1105098"
gene complement(join(1111208..1111969,1..945))
/locus_tag="MA5_00005"
/db_xref="GeneID:12007634"
CDS complement(join(1111208..1111969,1..945))
/locus_tag="MA5_00005"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404283.1"
/db_xref="GI:383486603"
/db_xref="GeneID:12007634"
/translation="MQKILIEGYDISKDNANPDIKEIRNLDHLPSAKACEYFIHAHGA
EFFYQNSHLGLLGKIQSYFMPDPSYLSLTMSSNGGATPMLDITLLNKIQRNTPANQCN
IVHIFSCCSGAAQHHLDFIEGNIVLCTYNKASDNNVTQLANSNYETRIKKHSSLIEYI
HDNFHLLVASDFSISYKLDNEIYNFSLSSDNIKNMKSIEELPVFLYKEYGTFVKFYQN
IYAKYHVSYPEIFNISIGTKPKGLTYADLVRVFTRALTLETYNFNKFSLSKIENLLHQ
KGLNTDFSVDQAIEQENFELLTSLLNYDNTNIQFYTINKTIDKGNLDILKAVVAHSTT
KIESYNIDRAIDKGNLDILKAVVAHSTTKIESYNINKTIDKGNLDILKAVVAHSTTKI
ESYNINKTIDKGNLDILKAVVAHSTTKIESYNIDRAIDKGNLDILKAVVAHSTTKIES
YNIDRAIDKGNLDILKAVVAHSTTKIESYNIDRAIDKGNLDILKAVVAHSTTKIESYN
FNTVIKIGNLEMLDIILQHSYNSEELVTKYHNYTINNIMPEVNTIPTIEEDVSILGAE
IV"
gene complement(1429..1578)
/locus_tag="MA5_00010"
/db_xref="GeneID:12007636"
CDS complement(1429..1578)
/locus_tag="MA5_00010"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404284.1"
/db_xref="GI:383486604"
/db_xref="GeneID:12007636"
/translation="MHYLGYGGLSLGTILAIVISFNANKSILWAIIHGFFGWFYIVYY
LLLKK"
gene complement(2409..3916)
/locus_tag="MA5_r04375"
/db_xref="GeneID:12007670"
rRNA complement(2409..3916)
/locus_tag="MA5_r04375"
/product="16S ribosomal RNA"
/db_xref="GeneID:12007670"
gene complement(5366..7165)
/locus_tag="MA5_00015"
/db_xref="GeneID:12007672"
CDS complement(5366..7165)
/locus_tag="MA5_00015"
/note="COG5000 Signal transduction histidine kinase
involved in nitrogen fixation and metabolism regulation"
/codon_start=1
/transl_table=11
/product="nitrogen regulation protein NTRY (ntrY)"
/protein_id="YP_005404285.1"
/db_xref="GI:383486605"
/db_xref="GeneID:12007672"
/translation="MLSDLKQNLRSYFSSRILILALAIAAIISVCTTFYVISLEAKNF
STIIGFLLIDLAIFLILGILLTQKFFTKNNDNDSSKLQNRIVIAFSLVAAIPTIIVSV
FSVYFFNLSVKAWFDKKISTVLDQSVIVAETYIAEHKVQLKETALAVAEDLSDMYYDL
IHNPALFTKTLNTEADMRSLDEAIVLNKSTNTIVANSYLSFSLSFATIPAHLIKKADL
GEPVEVKSDPTTIRMLIKLKEYNDVYLLVGRLVDNKIIDHIDATNGAAAEYNSLKNEI
DNIQIKFSIMFIFIALLLLFVAINFGVLFTAKIVKPIKKLVTATDKVKDGDLTVQVPE
NEVDKDEIGTLYAAFNRMIKQLSRQQRDLVIAQRAMAWSDVAKKVAHEIKNPLTPILL
ASERLLKKFSSEINEKSEFESYLKMIIRHTNDIKNIVSEFVLFARLPAPKFTKSELVY
LVKHIIEARKLLNDNIVYTYDSNVDQFDFMCDATQINQVMINVLKNAEESIEGQEFGK
IDVILDAKDDFISVIVMDNGKGFPPELIGKATESYVTTSSKGMGVGLAIVKRIVEEHC
GVLDIANREDEGAIIDIKFDLKELHLKVRRSGG"
misc_feature complement(<6056..7141)
/locus_tag="MA5_00015"
/note="Signal transduction histidine kinase involved in
nitrogen fixation and metabolism regulation [Signal
transduction mechanisms]; Region: NtrY; COG5000"
/db_xref="CDD:34605"
misc_feature complement(6092..6241)
/locus_tag="MA5_00015"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(6098..6103,6110..6115,6119..6124,
6131..6136,6140..6145,6197..6199,6203..6208,6215..6220,
6224..6229,6236..6241))
/locus_tag="MA5_00015"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(5855..6031)
/locus_tag="MA5_00015"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(5870..5872,5882..5884,5891..5893,
5903..5905,5912..5914,5924..5926,5987..5989,5996..5998,
6008..6010,6017..6019,6029..6031))
/locus_tag="MA5_00015"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(6023..6025)
/locus_tag="MA5_00015"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(5411..5710)
/locus_tag="MA5_00015"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(5423..5425,5429..5434,5447..5449,
5453..5455,5501..5512,5573..5578,5582..5584,5588..5590,
5594..5596,5669..5671,5678..5680,5690..5692))
/locus_tag="MA5_00015"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(5678..5680)
/locus_tag="MA5_00015"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(5504..5506,5510..5512,5576..5578,
5582..5584))
/locus_tag="MA5_00015"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(7399..7599)
/gene="rpsU"
/locus_tag="MA5_00020"
/db_xref="GeneID:12007677"
CDS complement(7399..7599)
/gene="rpsU"
/locus_tag="MA5_00020"
/note="COG0828 Ribosomal protein S21"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S21"
/protein_id="YP_005404286.1"
/db_xref="GI:383486606"
/db_xref="GeneID:12007677"
/translation="MILVNVHAGNCDNTLKNFKKKLQRELYFRKLKEQRYYETPSAKR
VRKAQEAARRIRKFARKKMYEE"
misc_feature complement(<7450..7599)
/gene="rpsU"
/locus_tag="MA5_00020"
/note="30S ribosomal protein S21; Reviewed; Region: rpsU;
PRK00270"
/db_xref="CDD:178952"
gene 7690..8301
/locus_tag="MA5_00025"
/db_xref="GeneID:12007711"
CDS 7690..8301
/locus_tag="MA5_00025"
/note="COG5590 Uncharacterized conserved protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404287.1"
/db_xref="GI:383486607"
/db_xref="GeneID:12007711"
/translation="MSIKEEYNIKKINFVQSLLELLPFNEWNNNLLEEAEEKCSFEKG
YALIIFPDGLSEIIEFFEDYLDKIMLENLKTIEEPKKIREKISLAVKIRVKTLIPIIH
SKNASYFALNPIQGIKVAVRSCDAIWRYAGDKSLDFNYYTKRGLLLSVYISSILFYIQ
DESEHYIETDQFIETSIKNIVKTSVQIKKILDTSNIPIIRMFT"
misc_feature 7690..8298
/locus_tag="MA5_00025"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG5590"
/db_xref="CDD:227877"
misc_feature 8023..8235
/locus_tag="MA5_00025"
/note="COQ9; Region: COQ9; pfam08511"
/db_xref="CDD:192053"
gene 8902..12162
/gene="ileS"
/locus_tag="MA5_00030"
/db_xref="GeneID:12007730"
CDS 8902..12162
/gene="ileS"
/locus_tag="MA5_00030"
/EC_number="6.1.1.5"
/note="COG0060 Isoleucyl-tRNA synthetase"
/codon_start=1
/transl_table=11
/product="isoleucyl-tRNA synthetase"
/protein_id="YP_005404288.1"
/db_xref="GI:383486608"
/db_xref="GeneID:12007730"
/translation="MTNTKYYPDVSANVDFAAIEQEILKFWQNNNIFQKSIDYRNGES
EFIFYDGPPFANGLPHYGHLLTGFIKDVYARYKTIKGKKVERRFGWDCHGLPAEMQSE
KELGISGRIAITNFGIEKFNNHCRASVMQYASEWEQYVTRQARWVAFKNAYKTMDKNF
MESVLWAFKELYNKDLLYESMRVMPYSWACETPLSNFETRLDNAYRERTDKAITVSFV
LNEVTLINGIISQKSDMKEGDNFKEYRILAWTTTPWTLPANLALAVGSDIDYAFVDKN
EVCYIIAASSVAKYAKELGLSGKENFEIIKGLKLQGLSYKPLFNYFENHPNSFKIFAS
DFVVEGDGTGIVHMAPGFGEDDQILCESKGIELVCPVDNSGKFTKEIPDLEGVQVFDA
NDKIIIKLKEQGNWIKTEQYIHNYPHCWRTDTPLIYKAVPSWYVRVTKFKDRMVELNQ
QINWIPHNVKDNLFGKWLENARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEEI
EKDFGVKINDLHRPFIDELTRTNPDDPTGKSTMRRIDDVFDCWFESGSMPYGQVHYPF
ENKKWFVEHFPADFIVEYSSQTRGWFYTLMVLSTALFDRPPFLNCICHGVILDATGQK
LSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKMVFDTLRLFIKPI
WNAYHFFTIYANADSLKGTLNFASQNVLDVYILSKLKIAVNKIEESLDNFDTQTAYHA
VSEFFEVLNNWYIRRSRARFWKNEKDTDKQNAYNTLYSCLKIMTIAMSALIPMISETI
YQGLHNTAITQLNCLLSEGKHIVQNPMSDTQDYNTSVHLCNYPTLSDFEINYELVSTM
DNVLDICSNSLFIRSTENIRVRQPLACITIISKHNNNLKDFEDLIKDEINVKTVIYRD
DLENYARKKLSLNFAILGKRLPHKMKAIIDAAKKGEWEATTLGLAICGEILNSDEYTL
ILEPYSHIKGTANFDNNSSLLILNLELTSELIEEGYARDIVRFIQYARKEADFSITDR
ILIEIISEFDLSKIIDHYGDFIKEQTLGEFAKNFTPDYVSKVALENNQIQLKVKRL"
misc_feature 8911..12156
/gene="ileS"
/locus_tag="MA5_00030"
/note="isoleucyl-tRNA synthetase; Reviewed; Region: ileS;
PRK06039"
/db_xref="CDD:235681"
misc_feature 9034..>9459
/gene="ileS"
/locus_tag="MA5_00030"
/note="catalytic core domain of isoleucyl-tRNA
synthetases; Region: IleRS_core; cd00818"
/db_xref="CDD:173909"
misc_feature 9079..9090
/gene="ileS"
/locus_tag="MA5_00030"
/note="HIGH motif; other site"
/db_xref="CDD:173909"
misc_feature <10174..10872
/gene="ileS"
/locus_tag="MA5_00030"
/note="catalytic core domain of isoleucyl-tRNA
synthetases; Region: IleRS_core; cd00818"
/db_xref="CDD:173909"
misc_feature order(10288..10290,10552..10554,10561..10563,10648..10662,
10666..10668,10672..10674,10741..10755,10765..10782)
/gene="ileS"
/locus_tag="MA5_00030"
/note="active site"
/db_xref="CDD:173909"
misc_feature 10771..10785
/gene="ileS"
/locus_tag="MA5_00030"
/note="KMSKS motif; other site"
/db_xref="CDD:173909"
misc_feature 10900..11502
/gene="ileS"
/locus_tag="MA5_00030"
/note="Anticodon-binding domain of archaeal, bacterial,
and eukaryotic cytoplasmic isoleucyl tRNA synthetases;
Region: Anticodon_Ia_Ile_ABEc; cd07961"
/db_xref="CDD:153415"
misc_feature order(10906..10908,10918..10920,10927..10929,10942..10944,
10951..10953,10960..10965,11104..11106,11113..11118,
11125..11130,11137..11139,11149..11151,11161..11163,
11170..11172,11491..11493,11500..11502)
/gene="ileS"
/locus_tag="MA5_00030"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153415"
misc_feature order(10951..10953,10960..10962)
/gene="ileS"
/locus_tag="MA5_00030"
/note="anticodon binding site; other site"
/db_xref="CDD:153415"
gene complement(12837..14834)
/locus_tag="MA5_00035"
/db_xref="GeneID:12007740"
CDS complement(12837..14834)
/locus_tag="MA5_00035"
/note="COG4770 Acetyl/propionyl-CoA carboxylase, alpha
subunit"
/codon_start=1
/transl_table=11
/product="acetyl-CoA carboxylase, biotin carboxylase"
/protein_id="YP_005404289.1"
/db_xref="GI:383486609"
/db_xref="GeneID:12007740"
/translation="MTKPLFDKILIANRSEIAVRIIRTLKKMGIGSVAVYSEADTNSM
YVQHADEAYYIGDSPATASYLSVKNLISAIRESGASAVHPGYGFLSENPNFANILKRE
GVVLIGPSAGTIKKMGDKIEAKKIAIEAGVSTVPGYMGTIKDVKQAIDIAKEIGFPVI
VKATAGGGGRGMRVVNNPAEMANAFESAKLEAANSFSDDRLFIEKLIQTPRHIEIQLI
ADQYGNSVCLGERECSIQRHHQKVIEEAPSSFITENIRHEMYRQVISLSQKVGYYSAG
TVEFIVDSNKNFYFLEMNTRLQVEHPVTELITGIDIVEEMIKIAAGEKLSFTQDDIKL
KGWAFESRICAENPSRGFLPSSGRIIAYSEPAKSPNIRIDTGIGLGGEVSMFYDSMIA
KLCTYGETREQAIEVMRSALSSYIINGIAHNISFLEAVMLHPRFVSGDISTAFIQEEY
PDGFSGASLTSEVTTVFLATAIFIYISEQRRASLISGNINNQANKIGTRWVVTIDDKL
FPVLITPVENGYNIRHESDRIYIRSNWNLGNELFTAMINGKKTNVKIENIRTGYLLSH
AGISVKAFVRSPRISELEALMVSKVVLEENSELQAPLSGQIAAIKVKEGQEVTIGQEI
MILTAMKMENLILAERDGKIAKIFVNEKDNVVRGKILLEFA"
misc_feature complement(12840..14822)
/locus_tag="MA5_00035"
/note="Acetyl/propionyl-CoA carboxylase, alpha subunit
[Lipid metabolism]; Region: COG4770"
/db_xref="CDD:227111"
misc_feature complement(14496..14819)
/locus_tag="MA5_00035"
/note="Carbamoyl-phosphate synthase L chain, N-terminal
domain; Region: CPSase_L_chain; pfam00289"
/db_xref="CDD:201133"
misc_feature complement(13851..14480)
/locus_tag="MA5_00035"
/note="Carbamoyl-phosphate synthase L chain, ATP binding
domain; Region: CPSase_L_D2; pfam02786"
/db_xref="CDD:190425"
misc_feature complement(13497..13817)
/locus_tag="MA5_00035"
/note="Biotin carboxylase C-terminal domain; Region:
Biotin_carb_C; smart00878"
/db_xref="CDD:214878"
misc_feature complement(12843..13043)
/locus_tag="MA5_00035"
/note="The biotinyl-domain or biotin carboxyl carrier
protein (BCCP) domain is present in all biotin-dependent
enzymes, such as acetyl-CoA carboxylase, pyruvate
carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
carboxylase, geranyl-CoA carboxylase; Region:
biotinyl_domain; cd06850"
/db_xref="CDD:133459"
misc_feature complement(order(12918..12920,12939..12947,12972..12974))
/locus_tag="MA5_00035"
/note="carboxyltransferase (CT) interaction site; other
site"
/db_xref="CDD:133459"
misc_feature complement(12942..12944)
/locus_tag="MA5_00035"
/note="biotinylation site [posttranslational
modification]; other site"
/db_xref="CDD:133459"
gene complement(14927..16471)
/locus_tag="MA5_00040"
/db_xref="GeneID:12006898"
CDS complement(14927..16471)
/locus_tag="MA5_00040"
/note="COG4799 Acetyl-CoA carboxylase, carboxyltransferase
component (subunits alpha and beta)"
/codon_start=1
/transl_table=11
/product="propionyl-CoA carboxylase subunit beta"
/protein_id="YP_005404290.1"
/db_xref="GI:383486610"
/db_xref="GeneID:12006898"
/translation="MNQSNIISPELLDERKNIARQGGGEARINAQHQKGKLTARERIE
VLLDPNSFTETGMFVSHRCDNFGMQNKKFLGDGVVTGYGTINGRLVFIYSQDFTVLGG
SLGEYHAKKICDIIDQAIATGAPVIGINDSGGARIQEGVDALAGYGELFQRNVLASGV
IPQITLIMGPCAGGAVYSPALTDFIFMVKNSSYMFVTGPDVVKTVTGEEVTQEKLGGA
RMHTTKSGVADLAFNNDIEALLEIRKFFNFLPSSNRSTLPVRPTVDPADRVDMSLSTL
IPNTPNKPYDMKELVERIVDEGEFFELQPDFAKNIIIGFGYMEGYPVGFIANQPLHLA
GCLDINASRKAARFIRFCDAFNISIVSLVDVPGFLPGTSQEHEGIIKHGAKLLYAYAE
ATVPKITVITRKAYGGAYIVMNSKHLRGDINYAWFNSEIAVMGAEGAAEIIFKEECKD
NEAKKQKIDEYRKVVTSPFVAASRGYLDDIIRPQNTRWRICKALNFLRTKKVSLPWKK
HDNLPL"
misc_feature complement(14930..16444)
/locus_tag="MA5_00040"
/note="Acetyl-CoA carboxylase, carboxyltransferase
component (subunits alpha and beta) [Lipid metabolism];
Region: COG4799"
/db_xref="CDD:227136"
misc_feature complement(15755..16363)
/locus_tag="MA5_00040"
/note="malonate decarboxylase subunit beta; Reviewed;
Region: PRK07189; cl17682"
/db_xref="CDD:248236"
misc_feature complement(<15107..>15631)
/locus_tag="MA5_00040"
/note="Acetyl-CoA carboxylase alpha subunit [Lipid
metabolism]; Region: AccA; cl17345"
/db_xref="CDD:247899"
gene 16547..16687
/locus_tag="MA5_00045"
/db_xref="GeneID:12006899"
CDS 16547..16687
/locus_tag="MA5_00045"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404291.1"
/db_xref="GI:383486611"
/db_xref="GeneID:12006899"
/translation="MSSTEDTKEVLKKVKSLAKFANLSTLLKKNLYRRKKVQKEKNNK
KY"
gene 17159..20617
/locus_tag="MA5_00050"
/db_xref="GeneID:12006900"
CDS 17159..20617
/locus_tag="MA5_00050"
/EC_number="6.2.1.20"
/note="COG0477 Permeases of the major facilitator
superfamily"
/codon_start=1
/transl_table=11
/product="acylglycerophosphoethanolamine acyltransferase"
/protein_id="YP_005404292.1"
/db_xref="GI:383486612"
/db_xref="GeneID:12006900"
/translation="MDTNKLYLFKDRRFLPNFIVQLFGCLNDNILKNALVILITYGIS
GTLSKYNNVLVLITNATFVLPFIIFASIAGQIADKYERANLMKILKIYEIGIIAFAIY
GFHHNNLLILFCSIGLMGIHSTFFGPIKYSVLPDHLNKDELLGANGFVEAGTFIGIFI
GTIIGSYYTISNNFIIYSLIIIAFLGFITSLFAPKSDNANHNIKINFNIIDESISMIK
YSKAKKQIYLAILGISWFWFIGAAIISQIPLLAKITFKADENVANLFLAVFSLGVGVG
SFLCSKIFENEITVKYLFISALGISIFGIDLFFASRISSVNYEPTQLKSIFVFLSKRH
NWRIVIDLFFLAIIGGLYIVPLFAILQHYANPAHRSRIIAANNLINSIFMVGSTIILS
LLFYLNFTIPWIILFISLANIVVTIYIYRLIPEVKIIPFKLLRRIFQICFDLMYKVEV
KGFENFQKAGKKVVVVANHISYLDPPLIATYLREEMIFAISPDIQKIWWIKPFLRMAK
TLPVDPSNPMAIKTLVKEVQKDQKIAIFPEGRISVTGSLMKIYEGPGMIADKADATLL
PVRIDGTQFTHLSKLKNILKKKIFPKITITVLPPVKFANMDTASNQERRSYISRTLYD
IMADMMFESSDYKNTLFSSLIEAAKIHGFKKKIVDDFEKNTVTYRDLIFKSFILGDLI
KKNNIFGRNLGLMLPNTTNTLITFYAMQSSGYVPAIINWSSAIGTIINCCKLAQIKVV
YTSKEFIEKANLHELITNLLDFGIKIIYLEDLKNQISTALKLKAKIGGYFTQTYYNYF
CHNRDEEKPAVIIFTSGTEGEPKAVLLSHRNLQTNRYQITAKVPFSPEDIVFNALPLF
HCFGLSGAIITTLNGIKLFLYPHALNYRSIPEAIYDIGATILISTDTFLKGYANYAHP
YDFFSLRYIFAGNEKLKETTRQFWLNKYGIRIFEGYGITEAAPIIACNTPMHNKAGTV
GRLLPKINYKLEKVAGINEGGRLLIKGPNIMLGYLDLEGQRSHKEWYDTGDIVKIDSE
GYITILGRLKRFAKIAEEMISLTRIEEFASEIDPDSLHAAISVQDKRHGEKIILLTTG
SDINQENFTNMLSNAQISLLHLPKLIITNSEIPLLASGKIDYIEIMKNINLRDFTHSE
CCDLDR"
misc_feature 17162..20599
/locus_tag="MA5_00050"
/note="acylglycerophosphoethanolamine acyltransferase;
Provisional; Region: PRK06814"
/db_xref="CDD:180708"
misc_feature 17255..18427
/locus_tag="MA5_00050"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(17276..17278,17285..17293,17297..17302,17333..17335,
17342..17347,17354..17356,17366..17371,17375..17380,
17525..17530,17537..17542,17549..17554,17561..17563,
17597..17602,17609..17614,17630..17632,17867..17869,
17876..17881,17888..17893,17900..17902,17942..17944,
17954..17956,17966..17968,17975..17977,17987..17989,
18194..18196,18203..18208,18215..18217,18227..18232,
18239..18241,18272..18277,18284..18289,18296..18301,
18308..18310)
/locus_tag="MA5_00050"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature 18476..19003
/locus_tag="MA5_00050"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: AGPAT-like; Region:
LPLAT_AGPAT-like; cd07989"
/db_xref="CDD:153251"
misc_feature order(18563..18565,18572..18574,18578..18580,18626..18637,
18773..18781)
/locus_tag="MA5_00050"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153251"
misc_feature 19157..20371
/locus_tag="MA5_00050"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
gene complement(20966..21727)
/locus_tag="MA5_00055"
/db_xref="GeneID:12006901"
CDS complement(20966..21727)
/locus_tag="MA5_00055"
/note="COG1108 ABC-type Mn2+/Zn2+ transport systems,
permease components"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404293.1"
/db_xref="GI:383486613"
/db_xref="GeneID:12006901"
/translation="MTLIILALILISCIFAPLGCIALWKRYIYFGDGLAHSSFLAASI
SIIAHFPLIYSGIIVAILFSFFVFFFKNNSEKNAVINLISSFMLAVALIINYFTSLQN
NIVHLLFGDILSVSFNDLIILVVVLITIISFVVYFYNQILLIIINRDIAVIQGLKVNI
IELIFLLLLSLSVFAAIKIVGVLMVTAILLIPAMIARFVSYSPSQMIIISIFISLFIN
FCAAFSSFYFDLPLTPLFIILGTLIYSVLYLKRFL"
misc_feature complement(20975..21694)
/locus_tag="MA5_00055"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cl00462"
/db_xref="CDD:241879"
misc_feature complement(20975..21694)
/locus_tag="MA5_00055"
/note="ABC-type Mn2+/Zn2+ transport systems, permease
components [Inorganic ion transport and metabolism];
Region: ZnuB; COG1108"
/db_xref="CDD:224033"
misc_feature complement(order(20984..20986,20993..20998,21005..21007,
21014..21019,21026..21028,21173..21175,21401..21403,
21410..21415,21446..21448,21452..21457,21464..21466,
21473..21478))
/locus_tag="MA5_00055"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature complement(order(21035..21037,21050..21052,21185..21187,
21197..21199,21371..21373,21446..21448))
/locus_tag="MA5_00055"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
misc_feature complement(order(21119..21121,21140..21142,21266..21274,
21278..21295,21299..21304,21308..21316,21320..21325))
/locus_tag="MA5_00055"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
gene 21802..22560
/locus_tag="MA5_00060"
/db_xref="GeneID:12006902"
CDS 21802..22560
/locus_tag="MA5_00060"
/EC_number="2.1.1.64"
/note="COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol
methylase"
/codon_start=1
/transl_table=11
/product="bifunctional 3-demethylubiquinone-9
3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol
methylase"
/protein_id="YP_005404294.1"
/db_xref="GI:383486614"
/db_xref="GeneID:12006902"
/translation="MSSINKKELEKFEKISHNWWNKNGEFGILHRINHIRIEYIIEKI
KSNYNDISKLQILDVGCGGGLIAAPLALQGFNVTAIDALKSNVETATIYAQKNGLKIN
YLQATIEELENDKLYDVVICLEVIEHVANIQQFILNLVQHIKPNGIAIISTMNRTKKA
YLFGIIVAEYILGWVPKNTHDYSKFVKPSEIYEILTDTNIEIKELKGLVFNLAKNEWK
LSNDIDVNYFMCLEKKMNSLSSTCNGIPQLKRVI"
misc_feature 21802..22503
/locus_tag="MA5_00060"
/note="bifunctional 3-demethylubiquinone-9
3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol
methylase; Provisional; Region: PRK05134"
/db_xref="CDD:235350"
misc_feature 21967..22257
/locus_tag="MA5_00060"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(21976..21996,22042..22047,22117..22125,22168..22170)
/locus_tag="MA5_00060"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 22675..24087
/gene="gltX"
/locus_tag="MA5_00065"
/db_xref="GeneID:12006903"
CDS 22675..24087
/gene="gltX"
/locus_tag="MA5_00065"
/EC_number="6.1.1.17"
/note="COG0008 Glutamyl- and glutaminyl-tRNA synthetases"
/codon_start=1
/transl_table=11
/product="glutamyl-tRNA synthetase"
/protein_id="YP_005404295.1"
/db_xref="GI:383486615"
/db_xref="GeneID:12006903"
/translation="MTNIITRFAPSPTGFLHIGSARTALFNYLFARHNNGKFFLRIED
TDKKRSTKEAVEAIFSGLKWLGLNWDGEVIFQSKRNSLYKEAALKLLKEGKAYYCFTR
QEEIAKQRQQAVKDKQHFIFNSEWRDKGPSTYPADIKPVIRLKVPREGSITIHDTLQG
EIVIENSHIDDMILIRTDGTATYMLAVIVDDHDMGITHIIRGDDHLTNAARQIAIYHA
FGYEVPNMTHIPLIHGADGTKLSKRHGALGVEAYKDMGYLPESLCNYLLRLGWSHGDD
EIISMNQAIEWFNLASLGKSPSKLDFAKMNSINSHYLRMLDNDSLTSKTVEILKQNYK
ISEKEVSYIKQAMPSLIVRSETLRDLAQLAYIYLVDSPMIYSQDAKEVINNCDKDLIK
QVIENLSKLEQFNKECVQNKFKEIAIYNGLKLNDIMKPVRALITGMTASPSVFEIAET
LGKENILKRLKIIYYNNLNF"
misc_feature 22681..24063
/gene="gltX"
/locus_tag="MA5_00065"
/note="glutamyl-tRNA synthetase; Provisional; Region:
gltX; PRK14895"
/db_xref="CDD:184889"
misc_feature 22681..>22917
/gene="gltX"
/locus_tag="MA5_00065"
/note="catalytic core domain of discriminating
glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
/db_xref="CDD:173905"
misc_feature 22723..22734
/gene="gltX"
/locus_tag="MA5_00065"
/note="HIGH motif; other site"
/db_xref="CDD:173905"
misc_feature <23206..23619
/gene="gltX"
/locus_tag="MA5_00065"
/note="catalytic core domain of discriminating
glutamyl-tRNA synthetase; Region: GluRS_core; cd00808"
/db_xref="CDD:173905"
misc_feature order(23221..23223,23233..23235,23275..23280,23284..23289,
23362..23367,23389..23394)
/gene="gltX"
/locus_tag="MA5_00065"
/note="active site"
/db_xref="CDD:173905"
misc_feature 23389..23403
/gene="gltX"
/locus_tag="MA5_00065"
/note="KMSKS motif; other site"
/db_xref="CDD:173905"
gene 26173..26925
/locus_tag="MA5_00070"
/db_xref="GeneID:12006904"
CDS 26173..26925
/locus_tag="MA5_00070"
/note="COG0317 Guanosine polyphosphate
pyrophosphohydrolases/synthetases"
/codon_start=1
/transl_table=11
/product="guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase"
/protein_id="YP_005404296.1"
/db_xref="GI:383486616"
/db_xref="GeneID:12006904"
/translation="MEDIDIWQKKFEFCDYSKKLIGRIEYLNTIVDSPIDITEVEKGI
YYTRKYHATQMRQSGEPYYSHPIEVAIMLADFTALEAPKLYKSYMMNVALLHDTIEDT
ILTHADISKIFDKNIADNVERLTRIKPYGKISSGEMLNLLIQEQRYDIALIKVFDRLH
NLQTINAKSTEKALETVKETIESFLLIAAYLEIRTVEQQLLNVCNNFIKQHFPSEQKA
IFRSVYEISFFNFKIIQNKLKRMQYYFRKKKA"
misc_feature 26227..>26913
/locus_tag="MA5_00070"
/note="Guanosine polyphosphate
pyrophosphohydrolases/synthetases [Signal transduction
mechanisms / Transcription]; Region: SpoT; COG0317"
/db_xref="CDD:223394"
misc_feature 26302..26751
/locus_tag="MA5_00070"
/note="HD domain; Region: HD_4; pfam13328"
/db_xref="CDD:222047"
gene complement(26931..27335)
/locus_tag="MA5_00075"
/db_xref="GeneID:12006905"
CDS complement(26931..27335)
/locus_tag="MA5_00075"
/note="COG0317 Guanosine polyphosphate
pyrophosphohydrolases/synthetases"
/codon_start=1
/transl_table=11
/product="guanosine polyphosphate
pyrophosphohydrolase/synthetase"
/protein_id="YP_005404297.1"
/db_xref="GI:383486617"
/db_xref="GeneID:12006905"
/translation="MLQRVIKHLSYNLSKHDIAAQITGRIKHPISILYKLYRKGIKLE
ELTDIFAIRIVVIDEEKCYKALKIVHELYDHEKDKFKNYILNPKPNGYQSLHTIIITE
DNYKIEIQIRDYNMHYNAESGDAAHWKYKNSF"
misc_feature complement(<26943..>27335)
/locus_tag="MA5_00075"
/note="Guanosine polyphosphate
pyrophosphohydrolases/synthetases [Signal transduction
mechanisms / Transcription]; Region: SpoT; COG0317"
/db_xref="CDD:223394"
misc_feature complement(26973..27320)
/locus_tag="MA5_00075"
/note="Nucleotidyltransferase (NT) domain of RelA- and
SpoT-like ppGpp synthetases and hydrolases; Region:
NT_Rel-Spo_like; cd05399"
/db_xref="CDD:143389"
misc_feature complement(order(26973..26978,27000..27002,27006..27008,
27012..27014,27048..27050,27060..27062,27066..27068,
27072..27074,27087..27089,27093..27095,27177..27179,
27189..27194,27255..27257,27261..27263))
/locus_tag="MA5_00075"
/note="synthetase active site [active]"
/db_xref="CDD:143389"
misc_feature complement(order(26976..26978,27006..27008,27012..27014,
27048..27050,27060..27062,27066..27068,27072..27074,
27087..27089,27093..27095,27261..27263))
/locus_tag="MA5_00075"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143389"
misc_feature complement(order(27012..27014,27192..27194))
/locus_tag="MA5_00075"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143389"
gene complement(28226..29878)
/gene="groEL"
/locus_tag="MA5_00080"
/db_xref="GeneID:12006906"
CDS complement(28226..29878)
/gene="groEL"
/locus_tag="MA5_00080"
/note="COG0459 Chaperonin GroEL (HSP60 family)"
/codon_start=1
/transl_table=11
/product="chaperonin GroEL"
/protein_id="YP_005404298.1"
/db_xref="GI:383486618"
/db_xref="GeneID:12006906"
/translation="MTTKLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSF
GAPKITKDGVTVAKSIELKDKIKNAGAQLLKSAATKAAEVAGDGTTTATVLARALARE
GNKLVAAGYNPMDLKRGMDLAVNAVVEEIKRSSKKINSQEEIAQVGTISSNGDKEIGE
KIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENP
FILLFEKKLSNLQPMLPILEAVVQSQRPLLIIAEDVEGEALATLVVNRLRGGLKVAAV
KAPGFGDRRKAMMEDIAILTKGELITEDLGMKLENVNIKNLGTAKRVTISKENTVIVD
GNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKER
KDRVEDALAATRAAVEEGVVAGGGVTLLHASQTLTKLKVENKDQQAGIEIVIEALKDP
LKQIVKNAGENGGVVVGKLLEHNDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDA
ASVASLIITTETLIVDEPSDKEEPMPMRGGMGGMGGMGGMDF"
misc_feature complement(28274..29869)
/gene="groEL"
/locus_tag="MA5_00080"
/note="chaperonin GroEL; Reviewed; Region: groEL;
PRK12849"
/db_xref="CDD:237230"
misc_feature complement(28307..29869)
/gene="groEL"
/locus_tag="MA5_00080"
/note="GroEL_like type I chaperonin. Chaperonins are
involved in productive folding of proteins. They share a
common general morphology, a double toroid of 2 stacked
rings, each composed of 7-9 subunits. The symmetry of type
I is seven-fold and they are found...; Region: GroEL;
cd03344"
/db_xref="CDD:239460"
misc_feature complement(order(28310..28330,28337..28339,28502..28504,
28721..28723,28727..28729,29108..29110,29192..29194,
29288..29290,29651..29653,29660..29662,29672..29674,
29696..29698,29702..29704,29732..29734,29738..29743,
29756..29758,29762..29773,29804..29806,29855..29857,
29867..29869))
/gene="groEL"
/locus_tag="MA5_00080"
/note="ring oligomerisation interface [polypeptide
binding]; other site"
/db_xref="CDD:239460"
misc_feature complement(order(28391..28393,28397..28399,28517..28519,
28634..28636,28685..28687,29429..29431,29606..29608,
29618..29620,29780..29788))
/gene="groEL"
/locus_tag="MA5_00080"
/note="ATP/Mg binding site [chemical binding]; other site"
/db_xref="CDD:239460"
misc_feature complement(order(28478..28480,28487..28492,28496..28498,
28523..28525,28577..28579,29552..29554))
/gene="groEL"
/locus_tag="MA5_00080"
/note="stacking interactions; other site"
/db_xref="CDD:239460"
misc_feature complement(order(28649..28654,28754..28756,29300..29302,
29321..29323,29456..29458))
/gene="groEL"
/locus_tag="MA5_00080"
/note="hinge regions; other site"
/db_xref="CDD:239460"
gene complement(29899..30186)
/gene="groES"
/locus_tag="MA5_00085"
/db_xref="GeneID:12006907"
CDS complement(29899..30186)
/gene="groES"
/locus_tag="MA5_00085"
/note="COG0234 Co-chaperonin GroES (HSP10)"
/codon_start=1
/transl_table=11
/product="co-chaperonin GroES"
/protein_id="YP_005404299.1"
/db_xref="GI:383486619"
/db_xref="GeneID:12006907"
/translation="MSFKPLHDRIAIKPIENEEKTKGGIIIPDTAKEKPMQGEIVAVG
NGVLNKNGEIHPLELKVGDKVLYGKWAGTEIEIKGEKLIVMKESDVFGIIN"
misc_feature complement(29905..30183)
/gene="groES"
/locus_tag="MA5_00085"
/note="Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10
cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase,
to assist the folding and assembly of proteins and is
found in eubacterial cytosol, as well as in the matrix of
mitochondria and chloroplasts. It...; Region: cpn10;
cd00320"
/db_xref="CDD:238197"
misc_feature complement(order(29908..29916,29962..29964,29968..29970,
29983..29985,30013..30015,30076..30081,30160..30162,
30169..30171,30175..30177,30181..30183))
/gene="groES"
/locus_tag="MA5_00085"
/note="oligomerisation interface [polypeptide binding];
other site"
/db_xref="CDD:238197"
misc_feature complement(30094..30135)
/gene="groES"
/locus_tag="MA5_00085"
/note="mobile loop; other site"
/db_xref="CDD:238197"
misc_feature complement(order(30019..30021,30052..30054))
/gene="groES"
/locus_tag="MA5_00085"
/note="roof hairpin; other site"
/db_xref="CDD:238197"
gene complement(31973..32695)
/gene="rph"
/locus_tag="MA5_00090"
/db_xref="GeneID:12006908"
CDS complement(31973..32695)
/gene="rph"
/locus_tag="MA5_00090"
/EC_number="2.7.7.56"
/note="COG0689 RNase PH"
/codon_start=1
/transl_table=11
/product="ribonuclease PH"
/protein_id="YP_005404300.1"
/db_xref="GI:383486620"
/db_xref="GeneID:12006908"
/translation="MRQSGRKSNQLRPISLELSPLINAEGSCLIKIGNTHVMCSATCE
TTVPPFLRGQNQGWITAEYGMIPGSTSHRIKREAALGKQGGRTQEIQRLIGRAMRCVI
NLQKLGERQIIIDCDVINADGGTRTAAITGSYVALHLAIRSLMKKRILKVNPLISQIA
AISCGIYKGNAVLDLDYLEDSDAEVDSNFVFACNGNLIEVQGTAEKEPFSEEQFLAML
KLAKSGVVELFKLQNQVLIAAE"
misc_feature complement(31988..32695)
/gene="rph"
/locus_tag="MA5_00090"
/note="ribonuclease PH; Reviewed; Region: rph; PRK00173"
/db_xref="CDD:178914"
misc_feature complement(31988..32668)
/gene="rph"
/locus_tag="MA5_00090"
/note="Ribonuclease PH; Region: RNase_PH_bact; cd11362"
/db_xref="CDD:206767"
misc_feature complement(order(32030..32032,32039..32044,32051..32056,
32063..32065,32069..32086,32090..32092,32096..32110,
32333..32341,32345..32347,32351..32353,32357..32359,
32399..32401,32408..32410,32420..32422,32429..32434,
32438..32443,32465..32470,32477..32479,32483..32500,
32504..32506,32510..32512,32570..32572,32576..32578,
32582..32584,32588..32590,32594..32596,32624..32638))
/gene="rph"
/locus_tag="MA5_00090"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:206767"
misc_feature complement(order(32138..32140,32156..32158,32318..32335,
32438..32440,32501..32503))
/gene="rph"
/locus_tag="MA5_00090"
/note="active site"
/db_xref="CDD:206767"
gene 32907..33443
/locus_tag="MA5_00095"
/db_xref="GeneID:12006909"
CDS 32907..33443
/locus_tag="MA5_00095"
/note="COG0576 Molecular chaperone GrpE (heat shock
protein)"
/codon_start=1
/transl_table=11
/product="heat shock protein GrpE"
/protein_id="YP_005404301.1"
/db_xref="GI:383486621"
/db_xref="GeneID:12006909"
/translation="MKDYNIENNNVEEENPNVETQVVDNEEIVRLKAEIEELKDKLIR
TTAEIDNTRKRLEKARDEAKDYAIATFAKELLNVSDNLARALAHKPANSDVEVTNIIS
GVQMTKDELDKIFHKHHIEEIKPAIGSMFDYNLHNAISHIEHPDHEPNSIITLMQSGY
KIRDRLLRPAAVQVVKKP"
misc_feature 32967..33440
/locus_tag="MA5_00095"
/note="Molecular chaperone GrpE (heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: GrpE; COG0576"
/db_xref="CDD:223649"
misc_feature 33009..33428
/locus_tag="MA5_00095"
/note="GrpE is the adenine nucleotide exchange factor of
DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the
ATPase domain of Hsp70 catalyzing the dissociation of ADP,
which enables rebinding of ATP, one step in the Hsp70
reaction cycle in protein folding; Region: GrpE; cd00446"
/db_xref="CDD:238252"
misc_feature order(33015..33020,33027..33032,33039..33041,33051..33053,
33060..33065,33105..33107,33117..33119,33126..33128,
33147..33149,33159..33161,33216..33218,33225..33227,
33258..33260)
/locus_tag="MA5_00095"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238252"
misc_feature order(33066..33068,33303..33305,33312..33326,33372..33374,
33399..33401,33411..33413)
/locus_tag="MA5_00095"
/note="hsp70 (ATPase domain) interactions [polypeptide
binding]; other site"
/db_xref="CDD:238252"
gene 33578..34633
/locus_tag="MA5_00100"
/db_xref="GeneID:12006910"
CDS 33578..34633
/locus_tag="MA5_00100"
/note="COG0628 Predicted permease"
/codon_start=1
/transl_table=11
/product="permease PerM"
/protein_id="YP_005404302.1"
/db_xref="GI:383486622"
/db_xref="GeneID:12006910"
/translation="MNRTAVFWLVFLTLFISGFMLIPDTIKPFFIAFIISYLLQPAIY
FIESKLEISNKLASSIIYLIFLSIFFLIFTILIPIIYGQIFTFINNIPKYKNYLQSEI
LPPIMGKIYSIEPDIADKIKHSLSDFINSIFTILGSIANNFWRYTIITINIFVLFLLI
PIILFYFLRDWDKIITNMESLLPIKTRPKILEILSAINNLLSSYIRGQLNICLLLSTY
YSIAFTLIGIDLALLLGILTGFLVIIPLLGTFISFLLTLIIGYLTFGITSKLLYIMII
YLIGNIGESYILTPKIIGDKIGLHPLWIIFAIFACGSLFGIIGIFFAIPIAGITKILL
LNLIKFYKSSKFYRTDV"
misc_feature 33584..34507
/locus_tag="MA5_00100"
/note="pheromone autoinducer 2 transporter; Reviewed;
Region: tqsA; cl00465"
/db_xref="CDD:207060"
misc_feature 33593..34519
/locus_tag="MA5_00100"
/note="Domain of unknown function DUF20; Region: UPF0118;
pfam01594"
/db_xref="CDD:201878"
gene 34648..35313
/locus_tag="MA5_00105"
/db_xref="GeneID:12006911"
CDS 34648..35313
/locus_tag="MA5_00105"
/note="COG0593 ATPase involved in DNA replication
initiation"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404303.1"
/db_xref="GI:383486623"
/db_xref="GeneID:12006911"
/translation="MQQYIFHFTPSNKYHPDEFIVSSSNAQAYNIIKNWQYCFGANPY
KFTLLIKGPSSSGKTYLTKIWQNLSNAYLIKDIFFNEEILEKYNTFIIEDIENWQEPT
LLHIFNVINEKQKYLLLTSSDKNNNFTLPDLSSRIKSVLSILLNAPDDELIKILIFKH
FSISSVTISQQIIDFLLVNLPREYSKIIEILENINYFALISKRKITISLVKEVLNNYK
NKI"
misc_feature 34648..>35307
/locus_tag="MA5_00105"
/note="ATPase involved in DNA replication initiation [DNA
replication, recombination, and repair]; Region: DnaA;
COG0593"
/db_xref="CDD:223666"
misc_feature 34651..35292
/locus_tag="MA5_00105"
/note="hypothetical protein; Validated; Region: PRK06620"
/db_xref="CDD:168630"
gene complement(36495..36570)
/locus_tag="MA5_t04307"
/db_xref="GeneID:12006912"
tRNA complement(36495..36570)
/locus_tag="MA5_t04307"
/product="tRNA-Val"
/db_xref="GeneID:12006912"
gene complement(36633..36905)
/gene="rpsT"
/locus_tag="MA5_00110"
/db_xref="GeneID:12006913"
CDS complement(36633..36905)
/gene="rpsT"
/locus_tag="MA5_00110"
/note="COG0268 Ribosomal protein S20"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S20"
/protein_id="YP_005404304.1"
/db_xref="GI:383486624"
/db_xref="GeneID:12006913"
/translation="MANHSSAKKVVRQTVKRTLINKKRSSAIKTFIKKVIHEISRGNK
EDANLALSIAQSKIMQGVKKNIIKLNTASRKIRRLSKQIKNLYKSE"
misc_feature complement(36648..36905)
/gene="rpsT"
/locus_tag="MA5_00110"
/note="30S ribosomal protein S20; Reviewed; Region: rpsT;
PRK00239"
/db_xref="CDD:178943"
gene complement(36925..37335)
/gene="rplQ"
/locus_tag="MA5_00115"
/db_xref="GeneID:12006914"
CDS complement(36925..37335)
/gene="rplQ"
/locus_tag="MA5_00115"
/note="COG0203 Ribosomal protein L17"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L17"
/protein_id="YP_005404305.1"
/db_xref="GI:383486625"
/db_xref="GeneID:12006914"
/translation="MRHRIKGRRLNVTSSHRQSMLANMAVSLVIHEQIKTTLPKAKEL
RPYIEALITKAKKPDLAVRRSVLSKIKDKRAVEKIINILGVRYKDRPGGYTRIVKSGF
RYGDLAPIAYIEFVDRDINAKGNVHQDANEEIKN"
misc_feature complement(36988..37335)
/gene="rplQ"
/locus_tag="MA5_00115"
/note="Ribosomal protein L17 [Translation, ribosomal
structure and biogenesis]; Region: RplQ; COG0203"
/db_xref="CDD:223281"
gene complement(37348..38370)
/locus_tag="MA5_00120"
/db_xref="GeneID:12006915"
CDS complement(37348..38370)
/locus_tag="MA5_00120"
/EC_number="2.7.7.6"
/note="COG0202 DNA-directed RNA polymerase, alpha
subunit/40 kD subunit"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit alpha"
/protein_id="YP_005404306.1"
/db_xref="GI:383486626"
/db_xref="GeneID:12006915"
/translation="MLSLSKNWNTLIKPNRVTYENFPETNNKAKIIVEPLERGFGLTL
GNAMRRVLLSSLQGAAITSIKIPAIEHEFSSIPGVQEDVSEVILNIKGIEVKMHVSEK
RIIKLKAMGPCVVTAGMIDTGHDVEILNPDHVICNLAKNKQLEMELTCKVGKGYVLST
NSYEDNLPIGEIAIDALFNPVKSVTYKVENTRVGQVTDYDKLIMFVETNGDVLPEMAI
GLAARILQEQLQLFIAFEEQEEDKQVKTDSLPFSPYLLKRVDELELSVRSANCLKNDN
IIYIGDLVKRTESDMLRTPNFGRKSLNEIKEILAKFNLRFGMDVPDWPPENIQELSKR
YEDSYN"
misc_feature complement(37417..38346)
/locus_tag="MA5_00120"
/note="DNA-directed RNA polymerase subunit alpha;
Provisional; Region: PRK05182"
/db_xref="CDD:179956"
misc_feature complement(37675..38301)
/locus_tag="MA5_00120"
/note="N-terminal domain of the Alpha subunit of Bacterial
RNA polymerase; Region: RNAP_alpha_NTD; cd06928"
/db_xref="CDD:132904"
misc_feature complement(order(37756..37758,37762..37764,37771..37773,
37801..37812,37816..37824,37840..37842,37846..37848,
37903..37905,37954..37956,38098..38100,38116..38118,
38131..38142,38146..38148,38152..38154,38158..38160,
38221..38226,38233..38235,38245..38247,38281..38283))
/locus_tag="MA5_00120"
/note="alphaNTD - beta interaction site [polypeptide
binding]; other site"
/db_xref="CDD:132904"
misc_feature complement(order(37675..37680,37684..37689,37693..37698,
37705..37707,38206..38208,38218..38223,38230..38232,
38242..38244,38251..38259,38263..38265,38272..38274))
/locus_tag="MA5_00120"
/note="alphaNTD homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:132904"
misc_feature complement(order(37795..37797,37822..37827,37840..37842,
37897..37899,37903..37908,38095..38100,38107..38109,
38116..38118,38152..38154))
/locus_tag="MA5_00120"
/note="alphaNTD - beta' interaction site [polypeptide
binding]; other site"
/db_xref="CDD:132904"
misc_feature complement(37438..37638)
/locus_tag="MA5_00120"
/note="Bacterial RNA polymerase, alpha chain C terminal
domain; Region: RNA_pol_A_CTD; pfam03118"
/db_xref="CDD:202541"
gene complement(38389..38772)
/locus_tag="MA5_00125"
/db_xref="GeneID:12006916"
CDS complement(38389..38772)
/locus_tag="MA5_00125"
/note="COG0100 Ribosomal protein S11"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S11"
/protein_id="YP_005404307.1"
/db_xref="GI:383486627"
/db_xref="GeneID:12006916"
/translation="MNQTIKVKKKKKTITLGVVHIRASFNNTIVTFTDIQGNTISSAS
AGGNGFKGARKATPYAAQVTIDKASEKAKECGLKTISIRIGGPGAQRESAMRALFGQN
FVVTSILDVSSIAHNGVRPPKRRRV"
misc_feature complement(38392..38724)
/locus_tag="MA5_00125"
/note="30S ribosomal protein S11; Validated; Region:
PRK05309"
/db_xref="CDD:180007"
gene complement(38796..39173)
/gene="rpsM"
/locus_tag="MA5_00130"
/db_xref="GeneID:12006917"
CDS complement(38796..39173)
/gene="rpsM"
/locus_tag="MA5_00130"
/note="COG0099 Ribosomal protein S13"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S13"
/protein_id="YP_005404308.1"
/db_xref="GI:383486628"
/db_xref="GeneID:12006917"
/translation="MARIASVNIPDNKRLVVSLTYIYGLGSTMAAEICNKAKISKDKK
VKVLTDQELISLRNIIENEYKVEGDLKREVTLNIKKKKDIRCYQGLRHIRKLPVRGQN
THSNARTRKGKAIAIAGKKKTVK"
misc_feature complement(38844..39173)
/gene="rpsM"
/locus_tag="MA5_00130"
/note="Ribosomal protein S13 [Translation, ribosomal
structure and biogenesis]; Region: RpsM; COG0099"
/db_xref="CDD:223177"
misc_feature complement(38844..39167)
/gene="rpsM"
/locus_tag="MA5_00130"
/note="30S ribosomal protein S13; Region: bact_S13;
TIGR03631"
/db_xref="CDD:213840"
gene complement(39231..39872)
/gene="adk"
/locus_tag="MA5_00135"
/db_xref="GeneID:12006918"
CDS complement(39231..39872)
/gene="adk"
/locus_tag="MA5_00135"
/EC_number="2.7.4.3"
/note="COG0563 Adenylate kinase and related kinases"
/codon_start=1
/transl_table=11
/product="adenylate kinase"
/protein_id="YP_005404309.1"
/db_xref="GI:383486629"
/db_xref="GeneID:12006918"
/translation="MIVIFLGPPGAGKGTQGKKIAKKIDLPHIAVGDIFRTIIKTSTS
EAELINNYVKQGALIPNEIVNQVIKVFLLSSKYKNGYILDGYPRNLEQAKFFEAFIQK
PQIKIIYFDVADELLIKRVLGRYSCKNCGKIYNIHFLQPKIEHVCDVCSSSVFDYRKD
DNKEVIKKRIKVYKTETYPLIDYYKNSGNFYIVNANKNEQEIENDIQKILKIN"
misc_feature complement(39240..39872)
/gene="adk"
/locus_tag="MA5_00135"
/note="adenylate kinase; Reviewed; Region: adk; PRK00279"
/db_xref="CDD:234711"
misc_feature complement(39267..39869)
/gene="adk"
/locus_tag="MA5_00135"
/note="Adenylate kinase (ADK) catalyzes the reversible
phosphoryl transfer from adenosine triphosphates (ATP) to
adenosine monophosphates (AMP) and to yield adenosine
diphosphates (ADP). This enzyme is required for the
biosynthesis of ADP and is essential for...; Region: ADK;
cd01428"
/db_xref="CDD:238713"
misc_feature complement(order(39597..39599,39609..39614,39618..39623,
39696..39698,39765..39767,39780..39782))
/gene="adk"
/locus_tag="MA5_00135"
/note="AMP-binding site [chemical binding]; other site"
/db_xref="CDD:238713"
misc_feature complement(order(39354..39356,39366..39368,39501..39503,
39609..39611,39621..39623,39765..39767))
/gene="adk"
/locus_tag="MA5_00135"
/note="ATP-AMP (Ap5A)-binding site [chemical binding];
other site"
/db_xref="CDD:238713"
gene complement(39888..41189)
/gene="secY"
/locus_tag="MA5_00140"
/db_xref="GeneID:12006919"
CDS complement(39888..41189)
/gene="secY"
/locus_tag="MA5_00140"
/note="COG0201 Preprotein translocase subunit SecY"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecY"
/protein_id="YP_005404310.1"
/db_xref="GI:383486630"
/db_xref="GeneID:12006919"
/translation="MGQNFSKKSSNDLVNRIIFTLFMLIICRFGSFIPIPGIDSIALN
SVAEKNQFGILGMFNMLSGGSLGRMSIFALAIMPYITASIIIQLMSVAYKPLENLKKE
GETGKRKINQLSRYLTVLLASFQAYGVALSLESMVTNTGPVVILAGFFFRVTTVITLV
VGTILLMWLGEQITQRGIGNGTSLIIFVGIISGVPSAIISMFELSRKGALSPLIAITV
CIGVVLLIAIIIFFEKAQRKLLVQYPKRQVGNKIYGGEATHMPLKLNTSGVIPPIFAS
SILLFPTTLASFSNSNSDTMSMLTYYLGHGKPVYILLYVVLIMFFSFFYTAIVFNSEE
TANNLRKYGAYIPGKRPGKNTSDYFDYILTRLTVIGGIYLSVICVIPELLMNKYVISL
SLGGTSFLIVVNVVLDTMTQIQTYLFSSKYEGLMKKIKLKN"
misc_feature complement(39912..41156)
/gene="secY"
/locus_tag="MA5_00140"
/note="preprotein translocase subunit SecY; Reviewed;
Region: secY; PRK09204"
/db_xref="CDD:181698"
misc_feature complement(39960..40982)
/gene="secY"
/locus_tag="MA5_00140"
/note="SecY translocase; Region: SecY; pfam00344"
/db_xref="CDD:201169"
gene complement(41193..41645)
/gene="rplO"
/locus_tag="MA5_00145"
/db_xref="GeneID:12006920"
CDS complement(41193..41645)
/gene="rplO"
/locus_tag="MA5_00145"
/note="COG0200 Ribosomal protein L15"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L15"
/protein_id="YP_005404311.1"
/db_xref="GI:383486631"
/db_xref="GeneID:12006920"
/translation="MKLNELYNNLGAKKNKKRIARGIGSGKGKTAGRGIKGQKSRSGV
AIKGFEGGQTPMIKRLPKRGFKCISTKKYNIINIYNIEEALTDGRLSTNDIITKEKLL
EVGLINNKNLVKLLSICSDDFASPLSLKLDAYSSKAKYLIEKVGGQLL"
misc_feature complement(41205..41645)
/gene="rplO"
/locus_tag="MA5_00145"
/note="50S ribosomal protein L15; Reviewed; Region: rplO;
PRK05592"
/db_xref="CDD:235523"
gene complement(41659..41850)
/gene="rpmD"
/locus_tag="MA5_00150"
/db_xref="GeneID:12006921"
CDS complement(41659..41850)
/gene="rpmD"
/locus_tag="MA5_00150"
/note="COG1841 Ribosomal protein L30/L7E"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L30"
/protein_id="YP_005404312.1"
/db_xref="GI:383486632"
/db_xref="GeneID:12006921"
/translation="MNNKINNIKITQIKSAIGCKYDQRFTLIGLGLNKINKSVILKNT
NSIRGMVEKVKHLLKIENM"
misc_feature complement(41668..41808)
/gene="rpmD"
/locus_tag="MA5_00150"
/note="Ribosomal protein L30, which is found in eukaryotes
and prokaryotes but not in archaea, is one of the smallest
ribosomal proteins with a molecular mass of about 7kDa.
L30 binds the 23SrRNA as well as the 5S rRNA and is one of
five ribosomal proteins that...; Region: Ribosomal_L30;
cd01658"
/db_xref="CDD:100100"
misc_feature complement(order(41701..41706,41710..41718,41725..41730,
41743..41745,41752..41754,41758..41766,41773..41778,
41785..41793,41797..41802,41806..41808))
/gene="rpmD"
/locus_tag="MA5_00150"
/note="23S rRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:100100"
gene complement(41875..42402)
/gene="rpsE"
/locus_tag="MA5_00155"
/db_xref="GeneID:12006922"
CDS complement(41875..42402)
/gene="rpsE"
/locus_tag="MA5_00155"
/note="COG0098 Ribosomal protein S5"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S5"
/protein_id="YP_005404313.1"
/db_xref="GI:383486633"
/db_xref="GeneID:12006922"
/translation="MSKVKKNEEALSEVLVDVNRVTKVVKGGRRFAFSAYVVVGDKAG
RVGAGHGKAKEVNEARGKAKQAAKKRMMKVPLYQNRTIHHDVVGKSGAAKVILRRAKA
GTGVIAGGSMRAIFDSLGVHDIVAKSIGSTNVYAMISATFDALNKLASPKSIAIRRDK
KVHEISIKSYIQVNE"
misc_feature complement(41908..42402)
/gene="rpsE"
/locus_tag="MA5_00155"
/note="30S ribosomal protein S5; Validated; Region: rpsE;
PRK00550"
/db_xref="CDD:234790"
misc_feature complement(<42235..42372)
/gene="rpsE"
/locus_tag="MA5_00155"
/note="Ribosomal protein S5, N-terminal domain; Region:
Ribosomal_S5; pfam00333"
/db_xref="CDD:144065"
misc_feature complement(41926..42147)
/gene="rpsE"
/locus_tag="MA5_00155"
/note="Ribosomal protein S5, C-terminal domain; Region:
Ribosomal_S5_C; pfam03719"
/db_xref="CDD:190724"
gene complement(42419..42775)
/gene="rplR"
/locus_tag="MA5_00160"
/db_xref="GeneID:12006923"
CDS complement(42419..42775)
/gene="rplR"
/locus_tag="MA5_00160"
/note="COG0256 Ribosomal protein L18"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L18"
/protein_id="YP_005404314.1"
/db_xref="GI:383486634"
/db_xref="GeneID:12006923"
/translation="MRSAKLKFEKRKSRIRYKISKTSNRMRLSIFKSCRHIYAQIIDD
SKSITIAAASTLDKKIKKIKKSHCNIENAIKVGKEIAKKADSAGIKEVVFDRGGYKYH
GIIKALADAAREKIKF"
misc_feature complement(42434..42712)
/gene="rplR"
/locus_tag="MA5_00160"
/note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal
protein found in the central protuberance (CP) of the
large subunit. L18 binds 5S rRNA and induces a
conformational change that stimulates the binding of L5 to
5S rRNA. Association of 5S rRNA with 23S rRNA...; Region:
Ribosomal_L18_L5e; cd00432"
/db_xref="CDD:238246"
misc_feature complement(order(42464..42466,42497..42499,42620..42622,
42629..42637,42656..42658,42662..42664,42668..42685,
42695..42697,42710..42712))
/gene="rplR"
/locus_tag="MA5_00160"
/note="5S rRNA interface [nucleotide binding]; other site"
/db_xref="CDD:238246"
misc_feature complement(order(42437..42439,42485..42487,42494..42496))
/gene="rplR"
/locus_tag="MA5_00160"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:238246"
misc_feature complement(42479..42481)
/gene="rplR"
/locus_tag="MA5_00160"
/note="L5 interface [polypeptide binding]; other site"
/db_xref="CDD:238246"
gene complement(42791..43324)
/gene="rplF"
/locus_tag="MA5_00165"
/db_xref="GeneID:12006924"
CDS complement(42791..43324)
/gene="rplF"
/locus_tag="MA5_00165"
/note="COG0097 Ribosomal protein L6P/L9E"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L6"
/protein_id="YP_005404315.1"
/db_xref="GI:383486635"
/db_xref="GeneID:12006924"
/translation="MSRVGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAII
MEENKLVVKPLAVNKNARAMWGTARSIICNMITGVKEGFKLKLEINGVGYRAMVKGKY
LNLMLAKSHNTKIEIPSNIKIDLPKQNIILLEGIDKEKLGQFASIIIKQRPPEPYKGK
GIKFENKFIQRKEGKKN"
misc_feature complement(42797..43324)
/gene="rplF"
/locus_tag="MA5_00165"
/note="50S ribosomal protein L6; Validated; Region: rplF;
PRK05498"
/db_xref="CDD:235495"
misc_feature complement(43079..43294)
/gene="rplF"
/locus_tag="MA5_00165"
/note="Ribosomal protein L6; Region: Ribosomal_L6;
pfam00347"
/db_xref="CDD:215872"
misc_feature complement(42833..43054)
/gene="rplF"
/locus_tag="MA5_00165"
/note="Ribosomal protein L6; Region: Ribosomal_L6;
pfam00347"
/db_xref="CDD:215872"
gene complement(43333..43731)
/gene="rpsH"
/locus_tag="MA5_00170"
/db_xref="GeneID:12006925"
CDS complement(43333..43731)
/gene="rpsH"
/locus_tag="MA5_00170"
/note="COG0096 Ribosomal protein S8"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S8"
/protein_id="YP_005404316.1"
/db_xref="GI:383486636"
/db_xref="GeneID:12006925"
/translation="MSMTDNVADMLTRIRNAYKSKLINVSFPSSKIKTSILDVLQKEG
YIKDYVTTQKNNISYTEVALKYSVNGEASICEIHRVSKPGKRVYSAIKDLKGYYNNMG
IYILSTPYGVMSDREAHIKNVGGEVICKVF"
misc_feature complement(43336..43728)
/gene="rpsH"
/locus_tag="MA5_00170"
/note="30S ribosomal protein S8; Validated; Region: rpsH;
PRK00136"
/db_xref="CDD:234658"
gene complement(43750..44055)
/gene="rpsN"
/locus_tag="MA5_00175"
/db_xref="GeneID:12006926"
CDS complement(43750..44055)
/gene="rpsN"
/locus_tag="MA5_00175"
/note="COG0199 Ribosomal protein S14"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S14"
/protein_id="YP_005404317.1"
/db_xref="GI:383486637"
/db_xref="GeneID:12006926"
/translation="MAKVSSIQKNKSRQKKSQSLHNKRSELKSKIYDKSLSLEQRFPL
IIALAQLPRNSSSTRIRNRCELTGRPRGVIRKFGISRNKLRELIGRGLVPGVVKASW"
misc_feature complement(43753..44055)
/gene="rpsN"
/locus_tag="MA5_00175"
/note="30S ribosomal protein S14; Reviewed; Region: rpsN;
PRK08881"
/db_xref="CDD:181574"
gene complement(44073..44612)
/gene="rplE"
/locus_tag="MA5_00180"
/db_xref="GeneID:12006927"
CDS complement(44073..44612)
/gene="rplE"
/locus_tag="MA5_00180"
/note="COG0094 Ribosomal protein L5"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L5"
/protein_id="YP_005404318.1"
/db_xref="GI:383486638"
/db_xref="GeneID:12006927"
/translation="MLRFKELYKQKIIESLKKEFSFKNKHEIPKIKKIVINMGVGEAI
ADSKVINNALNDLTLISGQKPVVTLARKSIATFKLRENMKIGCKVTLRKDRMYDFLER
LVIVALPRVKEFRGFSYKSFDGKGNFTFGLKEQIVFPEINYDKIDTIRGMDITIVTSA
KTDQESKFLLSGFNLPFYN"
misc_feature complement(44076..44612)
/gene="rplE"
/locus_tag="MA5_00180"
/note="50S ribosomal protein L5; Validated; Region: rplE;
PRK00010"
/db_xref="CDD:178791"
misc_feature complement(44373..44543)
/gene="rplE"
/locus_tag="MA5_00180"
/note="Ribosomal protein L5; Region: Ribosomal_L5;
pfam00281"
/db_xref="CDD:109342"
misc_feature complement(44079..44363)
/gene="rplE"
/locus_tag="MA5_00180"
/note="ribosomal L5P family C-terminus; Region:
Ribosomal_L5_C; pfam00673"
/db_xref="CDD:201383"
gene complement(44599..44940)
/gene="rplX"
/locus_tag="MA5_00185"
/db_xref="GeneID:12006928"
CDS complement(44599..44940)
/gene="rplX"
/locus_tag="MA5_00185"
/note="COG0198 Ribosomal protein L24"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L24"
/protein_id="YP_005404319.1"
/db_xref="GI:383486639"
/db_xref="GeneID:12006928"
/translation="MIKLKVKKGDEVVIITGKYKGKKGKVLKVFPEENTVVVSGVNLV
KKHTKPNKMSEGGIITQESPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAKKSGE
IIGKVGNNVKV"
misc_feature complement(44629..44934)
/gene="rplX"
/locus_tag="MA5_00185"
/note="50S ribosomal protein L24; Reviewed; Region: rplX;
PRK00004"
/db_xref="CDD:234566"
misc_feature complement(44728..44916)
/gene="rplX"
/locus_tag="MA5_00185"
/note="KOW motif of Ribosomal Protein L26; Region:
KOW_RPL26; cd06089"
/db_xref="CDD:240513"
misc_feature complement(order(44737..44742,44803..44808,44851..44853,
44887..44895))
/gene="rplX"
/locus_tag="MA5_00185"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:240513"
gene complement(44937..45305)
/gene="rplN"
/locus_tag="MA5_00190"
/db_xref="GeneID:12006929"
CDS complement(44937..45305)
/gene="rplN"
/locus_tag="MA5_00190"
/note="COG0093 Ribosomal protein L14"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L14"
/protein_id="YP_005404320.1"
/db_xref="GI:383486640"
/db_xref="GeneID:12006929"
/translation="MIQMQSILEVADNSGAKKVMCIKVLGGSHHMMAKLGDVIVVSIK
EAIPGGKVKKGDVYKGVIVRTKTGVVRSDGSTIKFDKNALVLLNKQDEPIGTRVFGPV
TRELRAKKYVRIMSLAEEVL"
misc_feature complement(44940..45305)
/gene="rplN"
/locus_tag="MA5_00190"
/note="50S ribosomal protein L14; Validated; Region: rplN;
PRK05483"
/db_xref="CDD:180117"
gene complement(45366..45599)
/gene="rpsQ"
/locus_tag="MA5_00195"
/db_xref="GeneID:12006930"
CDS complement(45366..45599)
/gene="rpsQ"
/locus_tag="MA5_00195"
/note="COG0186 Ribosomal protein S17"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S17"
/protein_id="YP_005404321.1"
/db_xref="GI:383486641"
/db_xref="GeneID:12006930"
/translation="MPKRVLQGVVISSKTDKTVTVKVERKFKHPIYKKFVKVSKKYAA
HDIENKYKEGDKVSIVESRPISKTKTWVVLNLE"
misc_feature complement(45372..45599)
/gene="rpsQ"
/locus_tag="MA5_00195"
/note="30S ribosomal protein S17; Reviewed; Region: rpsQ;
PRK05610"
/db_xref="CDD:235532"
gene complement(45601..45816)
/locus_tag="MA5_00200"
/db_xref="GeneID:12006931"
CDS complement(45601..45816)
/locus_tag="MA5_00200"
/note="COG0255 Ribosomal protein L29"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L29"
/protein_id="YP_005404322.1"
/db_xref="GI:383486642"
/db_xref="GeneID:12006931"
/translation="MNDLKLLRSKLSTETIEELYKNLNLLKKELFNLRFQQALGELKN
TSRFSLVKKSIARIKTELTKRSNSEEY"
misc_feature complement(45622..>45717)
/locus_tag="MA5_00200"
/note="Ribosomal L29 protein/HIP. L29 is a protein of the
large ribosomal Subunit. A homolog, called heparin/heparan
sulfate interacting protein (HIP), has also been
identified in mammals. L29 is located on the surface of
the large ribosomal subunit, where it...; Region:
Ribosomal_L29_HIP; cd00427"
/db_xref="CDD:238243"
misc_feature complement(45712..45717)
/locus_tag="MA5_00200"
/note="L23 interface [polypeptide binding]; other site"
/db_xref="CDD:238243"
misc_feature complement(45700..45705)
/locus_tag="MA5_00200"
/note="trigger factor interaction site; other site"
/db_xref="CDD:238243"
misc_feature complement(order(45625..45627,45637..45642,45646..45651,
45679..45681))
/locus_tag="MA5_00200"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:238243"
gene complement(45809..46219)
/gene="rplP"
/locus_tag="MA5_00205"
/db_xref="GeneID:12006932"
CDS complement(45809..46219)
/gene="rplP"
/locus_tag="MA5_00205"
/note="COG0197 Ribosomal protein L16/L10E"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L16"
/protein_id="YP_005404323.1"
/db_xref="GI:383486643"
/db_xref="GeneID:12006932"
/translation="MLAPKKQKFRKAHKGRVMSKAKAGMTLAFGSFGLKSIDGWRVTA
RQIEAGRKAATRCMKRQGRLWIRIFPDVPVSKKPAEVRMGKGKGTPEFFAVRVSPGRI
MFEIEGVEENIALRALELASAKLPVRTRIVRRYE"
misc_feature complement(45824..46153)
/gene="rplP"
/locus_tag="MA5_00205"
/note="Ribosomal_L16_L10e: L16 is an essential protein in
the large ribosomal subunit of bacteria, mitochondria, and
chloroplasts. Large subunits that lack L16 are defective
in peptidyl transferase activity, peptidyl-tRNA hydrolysis
activity, association with...; Region: Ribosomal_L16_L10e;
cd01433"
/db_xref="CDD:238714"
misc_feature complement(order(45848..45853,45860..45865,45917..45919,
45959..45973,45992..45997,46007..46009,46013..46015,
46019..46027,46043..46045,46052..46054,46064..46066,
46073..46075,46082..46087,46133..46135,46142..46147,
46151..46153))
/gene="rplP"
/locus_tag="MA5_00205"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:238714"
misc_feature complement(46103..46108)
/gene="rplP"
/locus_tag="MA5_00205"
/note="5S rRNA interface [nucleotide binding]; other site"
/db_xref="CDD:238714"
misc_feature complement(order(46052..46057,46064..46072))
/gene="rplP"
/locus_tag="MA5_00205"
/note="putative antibiotic binding site [chemical
binding]; other site"
/db_xref="CDD:238714"
misc_feature complement(order(45899..45901,46025..46027,46031..46036,
46043..46045))
/gene="rplP"
/locus_tag="MA5_00205"
/note="L25 interface [polypeptide binding]; other site"
/db_xref="CDD:238714"
misc_feature complement(order(45962..45967,45974..45979))
/gene="rplP"
/locus_tag="MA5_00205"
/note="L27 interface [polypeptide binding]; other site"
/db_xref="CDD:238714"
gene complement(46234..46887)
/gene="rpsC"
/locus_tag="MA5_00210"
/db_xref="GeneID:12006933"
CDS complement(46234..46887)
/gene="rpsC"
/locus_tag="MA5_00210"
/note="COG0092 Ribosomal protein S3"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S3"
/protein_id="YP_005404324.1"
/db_xref="GI:383486644"
/db_xref="GeneID:12006933"
/translation="MGQKVCAHGFRVGPTLIKDWDSILYAEKHYKTLFIQDLKIRDLI
NKWFNQAQISRVLIERPSNKSIIININAKKPNIIIGKNGTEIDKLKKAIENMTFLKEV
YINIHEVRKFNIDAAIVAQTIAAQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRL
GGAEIARTEWYIEGRMPLHTLRADIDYSTAEAITTYGVIGVKVWIYKGEYKENKRYN"
misc_feature complement(46246..46887)
/gene="rpsC"
/locus_tag="MA5_00210"
/note="ribosomal protein S3, bacterial type; Region:
rpsC_bact; TIGR01009"
/db_xref="CDD:130082"
misc_feature complement(46555..46884)
/gene="rpsC"
/locus_tag="MA5_00210"
/note="K homology RNA-binding (KH) domain of the
prokaryotic 30S small ribosomal subunit protein S3. S3 is
part of the head region of the 30S ribosomal subunit and
is believed to interact with mRNA as it threads its way
from the latch into the channel. The KH...; Region:
30S_S3_KH; cd02412"
/db_xref="CDD:239095"
misc_feature complement(46639..46650)
/gene="rpsC"
/locus_tag="MA5_00210"
/note="G-X-X-G motif; other site"
/db_xref="CDD:239095"
misc_feature complement(46273..46521)
/gene="rpsC"
/locus_tag="MA5_00210"
/note="Ribosomal protein S3, C-terminal domain; Region:
Ribosomal_S3_C; pfam00189"
/db_xref="CDD:215779"
gene complement(46889..47248)
/gene="rplV"
/locus_tag="MA5_00215"
/db_xref="GeneID:12006934"
CDS complement(46889..47248)
/gene="rplV"
/locus_tag="MA5_00215"
/note="COG0091 Ribosomal protein L22"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L22"
/protein_id="YP_005404325.1"
/db_xref="GI:383486645"
/db_xref="GeneID:12006934"
/translation="MIQKNKNFATAKAKSIRVSPRKLNLVASFIRNMKVSEALVQLTF
SPKRIAKIVKDCLQSAIANAENNLGLDIDRLIITKATVGKSVVMKRIMPRAKGRATRI
NKFFSNLYITVTEKEDN"
misc_feature complement(46910..47224)
/gene="rplV"
/locus_tag="MA5_00215"
/note="Ribosomal protein L22/L17e. L22 (L17 in
eukaryotes) is a core protein of the large ribosomal
subunit. It is the only ribosomal protein that interacts
with all six domains of 23S rRNA, and is one of the
proteins important for directing the proper...; Region:
Ribosomal_L22; cd00336"
/db_xref="CDD:238205"
misc_feature complement(order(46910..46915,47009..47026,47051..47068,
47129..47134,47138..47143,47147..47155,47219..47224))
/gene="rplV"
/locus_tag="MA5_00215"
/note="putative translocon binding site; other site"
/db_xref="CDD:238205"
misc_feature complement(order(46934..46951,46985..46987,46994..46996,
47000..47008,47012..47014,47051..47053,47060..47062,
47072..47074,47156..47158,47165..47167,47177..47179,
47186..47194,47198..47200,47207..47209,47213..47215))
/gene="rplV"
/locus_tag="MA5_00215"
/note="protein-rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:238205"
gene complement(47258..47536)
/gene="rpsS"
/locus_tag="MA5_00220"
/db_xref="GeneID:12006935"
CDS complement(47258..47536)
/gene="rpsS"
/locus_tag="MA5_00220"
/note="COG0185 Ribosomal protein S19"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S19"
/protein_id="YP_005404326.1"
/db_xref="GI:383486646"
/db_xref="GeneID:12006935"
/translation="MARSIWKGPFVDGYLIKKVQKLMKSGKSEMIKTWSRRSTILPIF
VGFTFSVHNGNKFIPVYINEEMVGRKLGEFAPTRTFHGHGADKKVKRK"
misc_feature complement(47261..47536)
/gene="rpsS"
/locus_tag="MA5_00220"
/note="30S ribosomal protein S19; Reviewed; Region: rpsS;
PRK00357"
/db_xref="CDD:178985"
gene complement(47561..48382)
/gene="rplB"
/locus_tag="MA5_00225"
/db_xref="GeneID:12006936"
CDS complement(47561..48382)
/gene="rplB"
/locus_tag="MA5_00225"
/note="COG0090 Ribosomal protein L2"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L2"
/protein_id="YP_005404327.1"
/db_xref="GI:383486647"
/db_xref="GeneID:12006936"
/translation="MALKNFNPITPSLRELVQVDKTNLWKGRPLKTLTKGMSKTGGRN
QQGRITSWHRGGGHKKLYRVIDFKRKKIDISAIVERIEYDPNRTAFIALIKYDDGEYS
YILAPQKLSIGDRVISSQAADIKIGNCLPLKSIPIGTTLHNVEMKIGKGGQIARSAGT
SVELVGKDSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWRP
HVRGVAMNPVDHPHGGGEGKTSGGRHPVTPWGFSTKGKKTRKNKRTSKFIVKKRK"
misc_feature complement(47564..48382)
/gene="rplB"
/locus_tag="MA5_00225"
/note="50S ribosomal protein L2; Validated; Region: rplB;
PRK09374"
/db_xref="CDD:236488"
misc_feature complement(48029..48259)
/gene="rplB"
/locus_tag="MA5_00225"
/note="Ribosomal Proteins L2, RNA binding domain; Region:
Ribosomal_L2; pfam00181"
/db_xref="CDD:109247"
misc_feature complement(47633..48013)
/gene="rplB"
/locus_tag="MA5_00225"
/note="Ribosomal Proteins L2, C-terminal domain; Region:
Ribosomal_L2_C; pfam03947"
/db_xref="CDD:202823"
gene complement(48383..48679)
/gene="rplW"
/locus_tag="MA5_00230"
/db_xref="GeneID:12006937"
CDS complement(48383..48679)
/gene="rplW"
/locus_tag="MA5_00230"
/note="COG0089 Ribosomal protein L23"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L23"
/protein_id="YP_005404328.1"
/db_xref="GI:383486648"
/db_xref="GeneID:12006937"
/translation="MSVYKYYDLIRKPIITEKTTSISEQNKYTFYVNKFAKKLSLKRA
IEAIFKVKVKKVNILNIKGKKKRFKGIIGTQINRKKAIVTLEKDHNIDYAGGIK"
misc_feature complement(48389..48661)
/gene="rplW"
/locus_tag="MA5_00230"
/note="50S ribosomal protein L23; Reviewed; Region: rplW;
PRK05738"
/db_xref="CDD:235586"
gene complement(48676..49299)
/gene="rplD"
/locus_tag="MA5_00235"
/db_xref="GeneID:12006938"
CDS complement(48676..49299)
/gene="rplD"
/locus_tag="MA5_00235"
/note="COG0088 Ribosomal protein L4"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L4"
/protein_id="YP_005404329.1"
/db_xref="GI:383486649"
/db_xref="GeneID:12006938"
/translation="MKTKILSLANEEVGEITLNKDIFAVEFIRDDIIKQVIDWQRAKA
MFGNHKTKTVSEVSGTTKKPFKQKGTGNARQGSLRSVQMRGGGISHGPKVRSHAIKLP
KKVRKLGLIHALSEKYAEEKLLIIDSLKLDKPKTSILVNLLSKFQGQSFFVIDGNKVD
INFSLATKNIYNTLIVPQIGANVYDIIRHEYVLLSQEAVSFLEERLR"
misc_feature complement(48682..49299)
/gene="rplD"
/locus_tag="MA5_00235"
/note="50S ribosomal protein L4; Provisional; Region:
rplD; PRK05319"
/db_xref="CDD:235404"
gene complement(49541..50191)
/gene="rplC"
/locus_tag="MA5_00240"
/db_xref="GeneID:12006939"
CDS complement(49541..50191)
/gene="rplC"
/locus_tag="MA5_00240"
/note="COG0087 Ribosomal protein L3"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L3"
/protein_id="YP_005404330.1"
/db_xref="GI:383486650"
/db_xref="GeneID:12006939"
/translation="MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLAKH
GYNALIIGVKDQKISKVTKPMKQVFANAKIAPKTKLKEFRISEDNFIDIASILEVDHF
RVGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGK
KMAGHMGCNKVTIQNLKIFAVDTNRKLIMIQGSIPGHKNSYLLVKDAIKKAAITIA"
misc_feature complement(49580..50191)
/gene="rplC"
/locus_tag="MA5_00240"
/note="50S ribosomal protein L3; Validated; Region: rplC;
PRK00001"
/db_xref="CDD:178784"
gene complement(50192..50509)
/gene="rpsJ"
/locus_tag="MA5_00245"
/db_xref="GeneID:12006940"
CDS complement(50192..50509)
/gene="rpsJ"
/locus_tag="MA5_00245"
/note="COG0051 Ribosomal protein S10"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S10"
/protein_id="YP_005404331.1"
/db_xref="GI:383486651"
/db_xref="GeneID:12006940"
/translation="MKNKIKIRLKSFDHRSLDQATKEIVSAVKRTFATINGPIPLPRK
IERFTVNRSPHVHKKSREQFEIRKHKRLLVIDDPNPAVVDALSKVDLAAGVDVVIELE
SGE"
misc_feature complement(50207..50509)
/gene="rpsJ"
/locus_tag="MA5_00245"
/note="30S ribosomal protein S10; Reviewed; Region: rpsJ;
PRK00596"
/db_xref="CDD:179076"
gene complement(50603..51787)
/locus_tag="MA5_00250"
/db_xref="GeneID:12006941"
CDS complement(50603..51787)
/locus_tag="MA5_00250"
/EC_number="3.6.5.3"
/note="COG0050 GTPases - translation elongation factors"
/codon_start=1
/transl_table=11
/product="elongation factor Tu"
/protein_id="YP_005404332.1"
/db_xref="GI:383486652"
/db_xref="GeneID:12006941"
/translation="MAKAKFERTKPHVNIGTIGHVDHGKTSLTAAITIILAKTGGAKA
TAYDQIDAAPEEKERGITISTAHVEYETQNRHYAHVDCPGHADYVKNMITGAAQMDGA
ILVVSAADGPMPQTREHILLAKQVGVPAMVVFLNKVDMVDDPDLLELVEMEVRELLSK
YGFPGNEIPIIKGSALQALEGKPEGEKAINELMNAVDSYIPQPIRATDKPFLMPIEDV
FSISGRGTVVTGRVESGIIKVGEEIEIVGLKNTQKTTCTGVEMFRKLLDEGQSGDNVG
ILLRGTKREEVERGQVLAKPGSIKPHDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFR
TTDVTGTIKLPSDKQMVMPGDNATFSVELIKPIAMQEGLKFSIREGGRTVGAGIVTKI
NN"
misc_feature complement(50612..51787)
/locus_tag="MA5_00250"
/note="elongation factor Tu; Reviewed; Region: PRK00049"
/db_xref="CDD:234596"
misc_feature complement(51179..51757)
/locus_tag="MA5_00250"
/note="Elongation Factor Tu (EF-Tu) GTP-binding proteins;
Region: EF_Tu; cd01884"
/db_xref="CDD:206671"
misc_feature complement(51710..51733)
/locus_tag="MA5_00250"
/note="G1 box; other site"
/db_xref="CDD:206671"
misc_feature complement(order(51248..51253,51329..51331,51341..51343,
51434..51436,51443..51454,51458..51463,51530..51535,
51587..51592,51674..51676,51686..51691,51698..51700,
51707..51712,51722..51724,51728..51730))
/locus_tag="MA5_00250"
/note="GEF interaction site [polypeptide binding]; other
site"
/db_xref="CDD:206671"
misc_feature complement(order(51260..51268,51371..51373,51377..51382,
51647..51649,51707..51724))
/locus_tag="MA5_00250"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206671"
misc_feature complement(51590..51622)
/locus_tag="MA5_00250"
/note="Switch I region; other site"
/db_xref="CDD:206671"
misc_feature complement(51602..51604)
/locus_tag="MA5_00250"
/note="G2 box; other site"
/db_xref="CDD:206671"
misc_feature complement(51536..51547)
/locus_tag="MA5_00250"
/note="G3 box; other site"
/db_xref="CDD:206671"
misc_feature complement(51485..51541)
/locus_tag="MA5_00250"
/note="Switch II region; other site"
/db_xref="CDD:206671"
misc_feature complement(51371..51382)
/locus_tag="MA5_00250"
/note="G4 box; other site"
/db_xref="CDD:206671"
misc_feature complement(51260..51268)
/locus_tag="MA5_00250"
/note="G5 box; other site"
/db_xref="CDD:206671"
misc_feature complement(50897..51157)
/locus_tag="MA5_00250"
/note="EFTU_II: Elongation factor Tu domain II. Elongation
factors Tu (EF-Tu) are three-domain GTPases with an
essential function in the elongation phase of mRNA
translation. The GTPase center of EF-Tu is in the
N-terminal domain (domain I), also known as the...;
Region: EFTU_II; cd03697"
/db_xref="CDD:239668"
misc_feature complement(50621..50890)
/locus_tag="MA5_00250"
/note="Domain III of elongation factor (EF) Tu. Ef-Tu
consists of three structural domains, designated I, II and
III. Domain III adopts a beta barrel structure. Domain III
is involved in binding to both charged tRNA and binding to
elongation factor Ts (EF-Ts); Region: EFTU_III; cd03707"
/db_xref="CDD:239678"
misc_feature complement(order(50630..50632,50660..50668,50786..50788,
50840..50848,50852..50854))
/locus_tag="MA5_00250"
/note="Antibiotic Binding Site [chemical binding]; other
site"
/db_xref="CDD:239678"
gene complement(51870..51943)
/locus_tag="MA5_t04309"
/db_xref="GeneID:12006942"
tRNA complement(51870..51943)
/locus_tag="MA5_t04309"
/product="tRNA-Gly"
/db_xref="GeneID:12006942"
gene complement(52049..52134)
/locus_tag="MA5_t04311"
/db_xref="GeneID:12006943"
tRNA complement(52049..52134)
/locus_tag="MA5_t04311"
/product="tRNA-Tyr"
/db_xref="GeneID:12006943"
gene 52323..53051
/locus_tag="MA5_00255"
/db_xref="GeneID:12006944"
CDS 52323..53051
/locus_tag="MA5_00255"
/note="COG0566 rRNA methylases"
/codon_start=1
/transl_table=11
/product="tRNA/rRNA methyltransferase"
/protein_id="YP_005404333.1"
/db_xref="GI:383486653"
/db_xref="GeneID:12006944"
/translation="MQNKQLDYKNSYYMYGKHPVLSAINNPKRQIENILCTKEFFDIN
KKLIGTRSYEIVNNYILSKLLKHQTHQGIAAKVRPIFSYNLDDIDINKPQCKIVILDQ
ITDTQNIGAIIRSAAAFYINAIILPQDNSPNESGSIAKAACGTLELIPIIKVTNLCSY
MNYLKKRGFWIIGVTGYAKEYFTDKLISDKIALVFGAEDKGMRRLVKETCDYLAKIPI
SKSVESLNVANAASIIFHSLHKYF"
misc_feature 52332..53042
/locus_tag="MA5_00255"
/note="rRNA methylases [Translation, ribosomal structure
and biogenesis]; Region: SpoU; COG0566"
/db_xref="CDD:223640"
misc_feature 52365..52559
/locus_tag="MA5_00255"
/note="RNA 2'-O ribose methyltransferase substrate
binding; Region: SpoU_sub_bind; smart00967"
/db_xref="CDD:214943"
misc_feature 52611..53030
/locus_tag="MA5_00255"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
pfam00588"
/db_xref="CDD:216010"
gene 53399..54784
/gene="fumC"
/locus_tag="MA5_00260"
/db_xref="GeneID:12006945"
CDS 53399..54784
/gene="fumC"
/locus_tag="MA5_00260"
/EC_number="4.2.1.2"
/note="COG0114 Fumarase"
/codon_start=1
/transl_table=11
/product="fumarate hydratase"
/protein_id="YP_005404334.1"
/db_xref="GI:383486654"
/db_xref="GeneID:12006945"
/translation="MKNYRIESDSFGEIQIEEKFYWGAQTQRSLNNFKISKQKMPKIL
IRALAILKKCAAQVNYEFGDLEYKIATSIDKAIDRILAGEFEDNFPLVVWQTGSGTQT
NMNMNEVIASIANEELTGKKGGKFPVHPNDHVNKGQSSNDSFPTAMHIATVLATKQQL
IPALNNLLTYLQDKSKDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYALERIEDA
LKKVYLLAQGGTAVGTGINSKIGFDIKFAQKVAEFTQQPFKTAPNKFESLAAHDALVE
FSGTLNTIAVSLMKIANDIRLLGSGPRCGLGELHLPENEPGSSIMPGKVNPTQVEALT
MVCTQVMGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLE
PNIARINTLRDKSLMLVTVLNPHIGYDNAAKIAKEAHKYGITLKEAAKKLNFLSEEEF
DKIVVPEKMIS"
misc_feature 53399..54778
/gene="fumC"
/locus_tag="MA5_00260"
/note="fumarate hydratase; Reviewed; Region: fumC;
PRK00485"
/db_xref="CDD:234779"
misc_feature 53411..54775
/gene="fumC"
/locus_tag="MA5_00260"
/note="Class II fumarases; Region: Fumarase_classII;
cd01362"
/db_xref="CDD:176465"
misc_feature order(53690..53692,53696..53698,53774..53776,53783..53794,
53813..53821,53960..53962,54368..54370,54374..54376,
54389..54391)
/gene="fumC"
/locus_tag="MA5_00260"
/note="active site"
/db_xref="CDD:176465"
misc_feature order(53954..53965,53975..53977,53993..53998,54014..54016,
54026..54028,54038..54040,54092..54094,54182..54187,
54194..54196,54203..54208,54212..54214,54221..54226,
54233..54235,54242..54247,54254..54259,54263..54268,
54275..54280,54428..54430,54452..54454,54461..54469,
54626..54628)
/gene="fumC"
/locus_tag="MA5_00260"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176465"
gene 55146..56504
/locus_tag="MA5_00265"
/db_xref="GeneID:12006946"
CDS 55146..56504
/locus_tag="MA5_00265"
/note="COG0206 Cell division GTPase"
/codon_start=1
/transl_table=11
/product="cell division protein FtsZ"
/protein_id="YP_005404335.1"
/db_xref="GI:383486655"
/db_xref="GeneID:12006946"
/translation="MVLNIKAPENIVLKPTITVFGVGGAGSNAVNNMIHANLQGANFV
VANTDAQSLEHSLCINKIQLGVSTTRGLGAGASPEVGALAAQESENEIRSSLENSNMV
FITAGMGGGTGTGSAPIIARIAKELGILTVGVVTKPFHFEGGHRMKTADKGLIELQQF
VDTLIVIPNQNLFRIANEQTTFADAFKMADDVLHAGVRGVTDLMIMPGLINLDFADIK
AVMSEMGKAMMGTGEDSGEDRAIKAAESAISNPLLDHSSMCGARGVLINITGGPDMTL
FEVDNAANRIREEVDNIDANIIFGSTFNPELKGIIRVSVVATGIDADKVPKYKLAIDK
NTNTLPEETYNESIIQHTQIETIPSFNSYSTENIEINESSIKQDYTGNEQELRLHVNA
VNKPENNSQKSSFLGKIWESLRTSNNQTLERKNVIVNTVDQDNKESDIHDIPAFLRKK
RD"
misc_feature 55167..56267
/locus_tag="MA5_00265"
/note="cell division protein FtsZ; Validated; Region:
PRK09330"
/db_xref="CDD:236468"
misc_feature 55188..56102
/locus_tag="MA5_00265"
/note="FtsZ is a GTPase that is similar to the eukaryotic
tubulins and is essential for cell division in
prokaryotes. FtsZ is capable of polymerizing in a
GTP-driven process into structures similar to those formed
by tubulin. FtsZ forms a ring-shaped septum at...; Region:
FtsZ_type1; cd02201"
/db_xref="CDD:100021"
misc_feature order(55212..55220,55227..55229,55299..55301,55464..55484,
55557..55562,55581..55583,55650..55652,55701..55703,
55710..55715,55722..55724)
/locus_tag="MA5_00265"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:100021"
misc_feature order(55773..55778,55782..55784,55962..55973,55980..55982)
/locus_tag="MA5_00265"
/note="SulA interaction site; other site"
/db_xref="CDD:100021"
gene complement(57011..57583)
/locus_tag="MA5_00270"
/db_xref="GeneID:12006947"
CDS complement(57011..57583)
/locus_tag="MA5_00270"
/note="COG0694 Thioredoxin-like proteins and domains"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404336.1"
/db_xref="GI:383486656"
/db_xref="GeneID:12006947"
/translation="MFIQTEETPNPDAIKFFPGQEISVDQPVFFSELAEVKGRSALAE
SLFHINNVKSVFLGSDFITVTKQARGNWQVIKPEILMVIMDHFISGFPVFNENTKIDD
EKHNLDMLSEIEKQIIETIETRVRPFVTQDGGDIIYKGFESGVVKLALRGACLGCPSS
TITLKNGIESMLKHFIPEVQEVKAVEEDFK"
misc_feature complement(57314..57577)
/locus_tag="MA5_00270"
/note="Scaffold protein Nfu/NifU N terminal; Region:
Nfu_N; smart00932"
/db_xref="CDD:214919"
misc_feature complement(57014..>57214)
/locus_tag="MA5_00270"
/note="Thioredoxin-like proteins and domains
[Posttranslational modification, protein turnover,
chaperones]; Region: COG0694"
/db_xref="CDD:223766"
gene complement(57623..58591)
/locus_tag="MA5_00275"
/db_xref="GeneID:12006948"
CDS complement(57623..58591)
/locus_tag="MA5_00275"
/note="COG0477 Permeases of the major facilitator
superfamily"
/codon_start=1
/transl_table=11
/product="muropeptide permease AmpG"
/protein_id="YP_005404337.1"
/db_xref="GI:383486657"
/db_xref="GeneID:12006948"
/translation="MITLINCIFCVYVLTSFNPNTNFIPFVLCLVVLAFFSSIYDMLI
QSSQMLLITDKNWGISEAACTTGFRIGILISGSGALYLSTIISWQDVYRTMAILCIPS
LLLIIFYPLKFKDKIIDNDFDRFLNAFYDFIKKPKCIVIISFMLLYRLQDSFLSIMPN
MFYLDIGYTKQDLAVGYKAFGMCATIFGGVIGGFLCRKYEYSYLLKRVLIYHALSSLS
FIYLYFLNQDITSLYIAVFCQEFTKGLTMSPFFSYQLKCCSSRYCITQIALITSITNV
GTILIGSISGYAATYLGWSYFFIVAGLCFIPAYILILYLPKTINSV"
misc_feature complement(57764..58561)
/locus_tag="MA5_00275"
/note="muropeptide transporter; Validated; Region: ampG;
cl17669"
/db_xref="CDD:248223"
misc_feature complement(58935..60157)
/note="potential frameshift: common BLAST hit:
gi|15604513|ref|NP_221031.1| ATP-dependent RNA helicase
RHLE (rhlE)"
gene complement(60586..60798)
/locus_tag="MA5_00290"
/db_xref="GeneID:12006949"
CDS complement(60586..60798)
/locus_tag="MA5_00290"
/note="COG1278 Cold shock proteins"
/codon_start=1
/transl_table=11
/product="cold shock-like protein"
/protein_id="YP_005404338.1"
/db_xref="GI:383486658"
/db_xref="GeneID:12006949"
/translation="MATNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAIDAAGLHS
LEEGQEVIFDIEEKQGKAYAVNLRVK"
misc_feature complement(60592..60780)
/locus_tag="MA5_00290"
/note="Cold-Shock Protein (CSP) contains an S1-like
cold-shock domain (CSD) that is found in eukaryotes,
prokaryotes, and archaea. CSP's include the major
cold-shock proteins CspA and CspB in bacteria and the
eukaryotic gene regulatory factor Y-box...; Region:
CSP_CDS; cd04458"
/db_xref="CDD:239905"
misc_feature complement(order(60619..60621,60706..60708,60739..60741,
60766..60768))
/locus_tag="MA5_00290"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:239905"
misc_feature complement(order(60700..60711,60730..60750))
/locus_tag="MA5_00290"
/note="RNA-binding motif; other site"
/db_xref="CDD:239905"
gene 61172..61257
/locus_tag="MA5_t04313"
/db_xref="GeneID:12006950"
tRNA 61172..61257
/locus_tag="MA5_t04313"
/product="tRNA-Leu"
/db_xref="GeneID:12006950"
gene 63638..63862
/locus_tag="MA5_00295"
/db_xref="GeneID:12006951"
CDS 63638..63862
/locus_tag="MA5_00295"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404339.1"
/db_xref="GI:383486659"
/db_xref="GeneID:12006951"
/translation="MKNKEESNILPEFIIDEEERKQLKAKNSKQELKLILITFTIILT
SFLTFCYFFFNYIEEKAAEYKLQREVEPKK"
gene complement(64043..64849)
/gene="ksgA"
/locus_tag="MA5_00300"
/db_xref="GeneID:12006952"
CDS complement(64043..64849)
/gene="ksgA"
/locus_tag="MA5_00300"
/EC_number="2.1.1.-"
/note="COG0030 Dimethyladenosine transferase (rRNA
methylation)"
/codon_start=1
/transl_table=11
/product="KsgA/Dim1 family 16S ribosomal RNA
methyltransferase"
/protein_id="YP_005404340.1"
/db_xref="GI:383486660"
/db_xref="GeneID:12006952"
/translation="MLPSIVKHATSHKINPLKKHGQNFIFDSSLCDKIIRASNVLENS
NVIEIGPGIGGLTRSILQKNPKSLTVIEIDERCIPLLNEIQEYYPNLNIIKQDVLKIN
LTDLIYDKVTVISNLPYHIGTELVIRLLKEVKLITNMTLMLQKEVVERICAIPSTKAY
GRLSVICQILAKVKKCFNVAPTAFYPHPKVYSAIVKIIPLENPPSIALINKVEQITKL
VFAGRRKMIKSSLRNLIPNIHEVLTQLKINCNDRAENLTPKDYLRIAMKL"
misc_feature complement(64448..64717)
/gene="ksgA"
/locus_tag="MA5_00300"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(64502..64504,64556..64564,64631..64636,
64685..64705))
/gene="ksgA"
/locus_tag="MA5_00300"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(64975..65862)
/locus_tag="MA5_00305"
/db_xref="GeneID:12006953"
CDS complement(64975..65862)
/locus_tag="MA5_00305"
/note="COG0760 Parvulin-like peptidyl-prolyl isomerase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404341.1"
/db_xref="GI:383486661"
/db_xref="GeneID:12006953"
/translation="MHKLLLIITVFFTFNVAQASLTSIVASVNDKPITLNEFHARKKM
IMALNNIENLTADQDKQLNDLAINSLIDESLLFQYAGDREIPQDEIDNAIKSIEDRNK
MAHGSLLQYLKNKSVNPESFILQIKSELIKMNILSSLSRSVQVSNKEIDVAILSSDQK
DVEILMQVFRSKDGSNKAFTKMNHLKNRLKKCSDVKRTLYDKFATMQIITSKLSNIEG
VKQTIVKDLIPDKASNVFEVNNKFEIILVCSKKILNVNADENNYVVNFLTNKKISQKA
QKIFKNMRKKAAIRIMFPS"
misc_feature complement(65473..65853)
/locus_tag="MA5_00305"
/note="SurA N-terminal domain; Region: SurA_N_3; cl07813"
/db_xref="CDD:244798"
gene complement(66046..68181)
/locus_tag="MA5_00310"
/db_xref="GeneID:12006954"
CDS complement(66046..68181)
/locus_tag="MA5_00310"
/note="COG1452 Organic solvent tolerance protein OstA"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404342.1"
/db_xref="GI:383486662"
/db_xref="GeneID:12006954"
/translation="MRLIYLIIIVLLPLASFTQQFKQNQSVKYNLIADFVFVEYNENK
NFIYAKGNIKIITDEYLLTTNNLLYDVKNDILWAEGNIRIKDKQNRIIEGDKAVLKNE
FKKGIISEFILLVGDHNLLIAKLAERIDENNLKLYGAEFTPCDVTCNSKPIWQIAAND
TYIKSAEHRIVYKNVFFEVYGVPIFYLPYFFHPTPSAPATSGLLVPDVKNKGFGIPIY
LRAKPNIDFTLTPRIASKYQTYELEARYRLNDTDNMNFQGSYGQLPYLLKKDGSVVKN
RKVSSYHYIASGNFISRDQTYDYGFRIERTSDKAYLKNYYNNYSSYLTSKMFLYKILG
ADYFAIEVLSFQGLGSNDSKYTDPLVFPKINTKNVIHLNDNGDSYIVVENNTLMYKAR
IGEQVARTSLQLSFMHNVLTSSGQILNFIAKDRGDFYLARSSYLDKQRKNQALQRNIP
ELQTLWRYPLVGNIKTINLLIEPIVSFSIGRKLSKQDKQFVIIDPVKYELSEKNIFLS
NRYSGIDCYDFGNRLSYGLNASILQEDNYLKLFLGQSRNTRYSIDLPTDDTENVGQIL
GNLSNNLEVFYNFRQDRYFRPIRDEVGGNFNYNKINFLGSFIQLTNLKKYYSVESIKV
SNNRVRQFYGVINYQLAENWTIGFATRIDLSRRSPNLFTRTIRVTYAKDCVRITTKIY
SDYLADGSRGIKKTTSSPTVAVSLKVLNM"
misc_feature complement(66049..68136)
/locus_tag="MA5_00310"
/note="Organic solvent tolerance protein OstA [Cell
envelope biogenesis, outer membrane]; Region: Imp;
COG1452"
/db_xref="CDD:31641"
misc_feature complement(66250..67338)
/locus_tag="MA5_00310"
/note="Organic solvent tolerance protein; Region: OstA_C;
pfam04453"
/db_xref="CDD:190995"
gene 68378..69739
/gene="xseA"
/locus_tag="MA5_00315"
/db_xref="GeneID:12006955"
CDS 68378..69739
/gene="xseA"
/locus_tag="MA5_00315"
/EC_number="3.1.11.6"
/note="COG1570 Exonuclease VII, large subunit"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease VII large subunit"
/protein_id="YP_005404343.1"
/db_xref="GI:383486663"
/db_xref="GeneID:12006955"
/translation="MIDNCIANQASKEFSVSEISNKIKELLENNFGYIKVKGEISGLK
RASSGHAYFNLKENTAILACTCWRPILAKIKFPLNDGMEVVIGGKLSSYSGNSRYQLS
VDNLQPAGLGAMLQILNERKTRLEKEGLFNKKRIPIPFLPDKIGVITSITGAVIKDII
HRIRERFPTRIIIWQVSVQGENSGHEMAEAIEGFNNLEEIHKPSVIIVARGGGSIEDL
WSFNDEILVRAAYNSKIPIISAVGHEADYTLIDLAADKRAPTPTAAAEFAVPVRSILN
NTIQSYEKILFNNTNRLIKYHEQSIVNYDKIHSYFSYYINNRQQLLDEIGFNLLDVLI
RFIALKETKIKSFSKERINYAKIINYKILELTHQTAYLFKSVNNTLKNFEYKLELNST
LLASLDYHNVLKRGFAIVKGDAGNFLSSKSAATNEQSLNIKFFDGEINVVLSCHDLNT
RSN"
misc_feature 68405..69727
/gene="xseA"
/locus_tag="MA5_00315"
/note="Exonuclease VII, large subunit [DNA replication,
recombination, and repair]; Region: XseA; COG1570"
/db_xref="CDD:224486"
misc_feature 68474..68707
/gene="xseA"
/locus_tag="MA5_00315"
/note="ExoVII_LU_OBF: A subfamily of OB folds
corresponding to the N-terminal OB-fold domain of
Escherichia coli exodeoxyribonuclease VII (ExoVII) large
subunit. E. coli ExoVII is composed of two non-identical
subunits. E. coli ExoVII is a...; Region: ExoVII_LU_OBF;
cd04489"
/db_xref="CDD:239935"
misc_feature order(68480..68482,68624..68626,68630..68632,68636..68638,
68696..68698)
/gene="xseA"
/locus_tag="MA5_00315"
/note="generic binding surface II; other site"
/db_xref="CDD:239935"
misc_feature order(68495..68503,68531..68542,68546..68548,68564..68572,
68576..68578,68621..68623,68642..68650,68675..68683)
/gene="xseA"
/locus_tag="MA5_00315"
/note="generic binding surface I; other site"
/db_xref="CDD:239935"
gene 70817..71626
/locus_tag="MA5_00320"
/db_xref="GeneID:12006956"
CDS 70817..71626
/locus_tag="MA5_00320"
/note="COG0708 Exonuclease III"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease III"
/protein_id="YP_005404344.1"
/db_xref="GI:383486664"
/db_xref="GeneID:12006956"
/translation="MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFPF
NELSDLPYHFYVHGQKSYNGVAIISKFPADQIIKDFQNNYCNDQARFLEIKLSSPIGY
SNIISLYAPNGSFVGSNKFVEKLKFYDNFINYLSTKKSCYEKTIIGGDFNIAPFDIDV
YSKVLTETTCCTEVEQKKLRTILNSGFEDLYRLMHPDKQEFSWWDYRAGCFEQNKGMR
IDMILGCNNTIDYLERCYMDYNLRTQKKPSDHIPIIASFCHSLSTKSGIKY"
misc_feature 70817..71587
/locus_tag="MA5_00320"
/note="Escherichia coli exonuclease III (ExoIII) and
Neisseria meningitides NExo-like subfamily of the ExoIII
family purinic/apyrimidinic (AP) endonucleases; Region:
ExoIII-like_AP-endo; cd09086"
/db_xref="CDD:197320"
misc_feature order(70835..70837,70916..70918,71141..71143,71150..71152,
71264..71266,71270..71272,71564..71566)
/locus_tag="MA5_00320"
/note="putative phosphate binding site [ion binding];
other site"
/db_xref="CDD:197320"
misc_feature order(70835..70837,70916..70918,71141..71143,71264..71266,
71270..71272,71474..71476,71561..71566)
/locus_tag="MA5_00320"
/note="putative catalytic site [active]"
/db_xref="CDD:197320"
misc_feature order(70841..70846,70850..70858,70916..70918,70994..70999,
71141..71143,71150..71152,71156..71158,71174..71176,
71264..71266,71270..71272,71423..71425,71432..71437,
71465..71467,71471..71476,71552..71557,71564..71566)
/locus_tag="MA5_00320"
/note="active site"
/db_xref="CDD:197320"
misc_feature order(70841..70843,70916..70918,71561..71566)
/locus_tag="MA5_00320"
/note="metal binding site A [ion binding]; metal-binding
site"
/db_xref="CDD:197320"
misc_feature order(70841..70846,70850..70858,70994..70999,71141..71143,
71150..71152,71156..71158,71174..71176,71432..71437,
71552..71557)
/locus_tag="MA5_00320"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:197320"
misc_feature order(71141..71143,71150..71152,71264..71266,71270..71272,
71423..71425,71465..71467,71471..71473,71564..71566)
/locus_tag="MA5_00320"
/note="putative AP binding site [nucleotide binding];
other site"
/db_xref="CDD:197320"
misc_feature order(71141..71143,71264..71266,71270..71272,71564..71566)
/locus_tag="MA5_00320"
/note="putative metal binding site B [ion binding]; other
site"
/db_xref="CDD:197320"
gene 71761..72018
/locus_tag="MA5_00325"
/db_xref="GeneID:12006957"
CDS 71761..72018
/locus_tag="MA5_00325"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404345.1"
/db_xref="GI:383486665"
/db_xref="GeneID:12006957"
/translation="MSGKLIKFYEKYMTIVGTIGNFMFYIQANKIWAYTSSYSVSIPT
FNISVIAFCNWLIYNILIINTPIIIDVVIRELILLLTIIIY"
misc_feature 71782..>71925
/locus_tag="MA5_00325"
/note="PQ loop repeat; Region: PQ-loop; cl12056"
/db_xref="CDD:209435"
gene 72021..73364
/locus_tag="MA5_00330"
/db_xref="GeneID:12006958"
CDS 72021..73364
/locus_tag="MA5_00330"
/note="COG1160 Predicted GTPases"
/codon_start=1
/transl_table=11
/product="GTP-binding protein Der"
/protein_id="YP_005404346.1"
/db_xref="GI:383486666"
/db_xref="GeneID:12006958"
/translation="MTKKIITLVGRPNVGKSTLFNRLSIRKKAIVHDLPGVTRDRKYT
DGKIGSFEFLLIDTPGLEENPDNMGERLMGQTTQAILEADLICFMVDGKSGVLPDDKL
LSNFVRKYNKHCILVVNKCEKAFDFDKEYYKLGFDSIVIISAEHGIGLIDLYDAIISK
LSVEESIERNIADPFRGDCLQIVVSGRPNAGKSTFINAIINDERLLTGPEAGITRESI
EVDWQYKNNHIKLIDTAGLRKKSTITASLEKLSTSDTINSIKFANTVILMIDALAHVK
QQDFNIASHIVNEGRSIIIVVNKWDLVKESEKEAFQKEFYYQINTHLPQIKGVPVLFI
SAINKQNIEQVLDACLKIYKIWNKKITTSKLNKWLDFTTKIHPLPLQKCGRRVRIKYM
TQIKTRPPTFKLFSNNPGKITDSYTRYLVNNMRDAFDMHGIPIRFTYVKNKNPYV"
misc_feature 72027..73352
/locus_tag="MA5_00330"
/note="GTP-binding protein Der; Reviewed; Region:
PRK00093"
/db_xref="CDD:178858"
misc_feature 72042..72503
/locus_tag="MA5_00330"
/note="EngA1 GTPase contains the first domain of EngA;
Region: EngA1; cd01894"
/db_xref="CDD:206681"
misc_feature 72048..72071
/locus_tag="MA5_00330"
/note="G1 box; other site"
/db_xref="CDD:206681"
misc_feature order(72057..72059,72063..72074,72375..72380,72384..72386,
72447..72455)
/locus_tag="MA5_00330"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206681"
misc_feature order(72102..72122,72132..72143)
/locus_tag="MA5_00330"
/note="Switch I region; other site"
/db_xref="CDD:206681"
misc_feature 72132..72134
/locus_tag="MA5_00330"
/note="G2 box; other site"
/db_xref="CDD:206681"
misc_feature order(72186..72203,72264..72269)
/locus_tag="MA5_00330"
/note="Switch II region; other site"
/db_xref="CDD:206681"
misc_feature 72189..72200
/locus_tag="MA5_00330"
/note="G3 box; other site"
/db_xref="CDD:206681"
misc_feature 72375..72386
/locus_tag="MA5_00330"
/note="G4 box; other site"
/db_xref="CDD:206681"
misc_feature 72447..72455
/locus_tag="MA5_00330"
/note="G5 box; other site"
/db_xref="CDD:206681"
misc_feature 72552..73079
/locus_tag="MA5_00330"
/note="EngA2 GTPase contains the second domain of EngA;
Region: EngA2; cd01895"
/db_xref="CDD:206682"
misc_feature 72576..72599
/locus_tag="MA5_00330"
/note="G1 box; other site"
/db_xref="CDD:206682"
misc_feature order(72585..72587,72591..72602,72912..72917,72921..72923,
73023..73031)
/locus_tag="MA5_00330"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206682"
misc_feature order(72621..72623,72630..72671)
/locus_tag="MA5_00330"
/note="Switch I region; other site"
/db_xref="CDD:206682"
misc_feature 72660..72662
/locus_tag="MA5_00330"
/note="G2 box; other site"
/db_xref="CDD:206682"
misc_feature 72717..72728
/locus_tag="MA5_00330"
/note="G3 box; other site"
/db_xref="CDD:206682"
misc_feature order(72726..72731,72801..72806)
/locus_tag="MA5_00330"
/note="Switch II region; other site"
/db_xref="CDD:206682"
misc_feature 72912..72923
/locus_tag="MA5_00330"
/note="G4 box; other site"
/db_xref="CDD:206682"
misc_feature 73023..73031
/locus_tag="MA5_00330"
/note="G5 box; other site"
/db_xref="CDD:206682"
gene complement(74014..75465)
/locus_tag="MA5_00335"
/db_xref="GeneID:12006959"
CDS complement(74014..75465)
/locus_tag="MA5_00335"
/note="COG0661 Predicted unusual protein kinase"
/codon_start=1
/transl_table=11
/product="ubiquinone biosynthesis protein"
/protein_id="YP_005404347.1"
/db_xref="GI:383486667"
/db_xref="GeneID:12006959"
/translation="MISIFLNLIRIFRIVSKKQILIDSRSPKYFRFIGYILALFFAPS
SLIKKSREDYGKRLTDCLTDLGPIYIKFGQTLSTRADLVGAEIACYLRLLQDKLPPFD
GAVARKLIYKSFIHHCKGEKSADAIISEHKQNVEKHSTNTCNVSLPFLHFDNNPIAAA
SISQVHKAQLITGGYVALKILRPDIRKKYNRDIKLLYFFAKIISKFSKAKRLKPITVI
DKFHETMRFELDLRLEAAAASELKDNMRHDINVIIPKIYWDLTSENILTTEWLDGTSI
YDISLLKEMNLEPKKIAQDFAVMFFNQAYRDGFFHADLHAGNILVNNQGKIILLDFGI
MGRLKEKDRLSVAEILFAFLKRDYKLVAKVHLRAGYIPANTDLDLFAGSCRAVTEPIV
GTPTKNISIGKLLTHLFKITEDFGMEVQPDLLILQKTLIMVEGIGRQLDSNVNMWQLA
EPWIKKWAVKNLSPEAKLLRLIKHYLNSVNDIT"
misc_feature complement(74020..75465)
/locus_tag="MA5_00335"
/note="Predicted unusual protein kinase [General function
prediction only]; Region: AarF; COG0661"
/db_xref="CDD:31005"
misc_feature complement(74695..75039)
/locus_tag="MA5_00335"
/note="ABC1 family; Region: ABC1; pfam03109"
/db_xref="CDD:111949"
misc_feature complement(74455..74808)
/locus_tag="MA5_00335"
/note="Aminoglycoside 3'-phosphotransferase (APH) and
Choline Kinase (ChoK) family. The APH/ChoK family is part
of a larger superfamily that includes the catalytic
domains of other kinases, such as the typical
serine/threonine/tyrosine protein kinases (PKs); Region:
APH_ChoK_like; cd05120"
/db_xref="CDD:88612"
misc_feature complement(order(74473..74478,74506..74508,74512..74517,
74527..74529,74653..74664,74704..74706,74806..74808))
/locus_tag="MA5_00335"
/note="active site"
/db_xref="CDD:88612"
misc_feature complement(order(74473..74478,74506..74508,74512..74517,
74527..74529,74653..74664,74704..74706,74806..74808))
/locus_tag="MA5_00335"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:88612"
misc_feature complement(74356..>74544)
/locus_tag="MA5_00335"
/note="Protein Kinases, catalytic domain; Region:
PKc_like; cl09925"
/db_xref="CDD:213116"
gene complement(75462..76208)
/gene="ubiE"
/locus_tag="MA5_00340"
/db_xref="GeneID:12006960"
CDS complement(75462..76208)
/gene="ubiE"
/locus_tag="MA5_00340"
/EC_number="2.1.1.-"
/note="COG2226 Methylase involved in
ubiquinone/menaquinone biosynthesis"
/codon_start=1
/transl_table=11
/product="ubiquinone/menaquinone biosynthesis
methyltransferase"
/protein_id="YP_005404348.1"
/db_xref="GI:383486668"
/db_xref="GeneID:12006960"
/translation="MYNTNFSFKKVDYTKKQWLINNIFSRVADKYDLMNDLMSIGLHR
LWKDEFIMQIPNLNSNILDVASGSGDIALKLAKKAKDRGNNISLILSDINEEMLNNAK
KKSIDLNLFQNIKFIVANAEELPFSDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPM
GKFVCLEFSKVKEGILKDFYKFYSFNIIPSIGQIIAGNKEAYEYLVESIALFPSQDDF
RIMIKESGFEEVHYKNLSGGIVAIHSAYKI"
misc_feature complement(75465..76187)
/gene="ubiE"
/locus_tag="MA5_00340"
/note="Methylase involved in ubiquinone/menaquinone
biosynthesis [Coenzyme metabolism]; Region: UbiE; COG2226"
/db_xref="CDD:32408"
misc_feature complement(75714..76031)
/gene="ubiE"
/locus_tag="MA5_00340"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(75801..75803,75846..75854,75930..75935,
75999..76019))
/gene="ubiE"
/locus_tag="MA5_00340"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(76445..77716)
/locus_tag="MA5_00345"
/db_xref="GeneID:12006961"
CDS complement(76445..77716)
/locus_tag="MA5_00345"
/note="COG4553 Poly-beta-hydroxyalkanoate depolymerase"
/codon_start=1
/transl_table=11
/product="poly-beta-hydroxyalkanoate depolymerase"
/protein_id="YP_005404349.1"
/db_xref="GI:383486669"
/db_xref="GeneID:12006961"
/translation="MMHCDLSTNYTYYILEWLRAQIAPMHLGIKILKELYEHEPLEDN
GFARIIHAYLTLCERMTRKYTKPEFNILETIINDKTYNINEQVIFKKPFCELRHFQKI
GFKKELPKLLIVAPMAGHHATLLRSTVHALLPYTDIYITDWTEANYVPLEAGHFDMDD
YIDYLIEFINFMGQNIHTMAVCQPTVPLLVAISLMSENNSPNVPSSMILIGGPIDARK
NPTVVNEFALSKSLEWFCEMLTMQVPPNYPGYGRKVYPGFLQLTGFISLNLLRHIDSH
LELWQSLLNSDYQKADYIIKFYDEYLSGMDMPAEFYLQTIDEVFQQFSLARGKFISEK
RPIDLKHITKCALLGIEGELDDIAAVGQTKAALKLCVNISESMKRYHLQNGVGHYGVF
SGSKFKQFIVPLIKEFIYDFDKTNVQKLKLK"
misc_feature complement(76481..77686)
/locus_tag="MA5_00345"
/note="polyhydroxyalkanoate depolymerase, intracellular;
Region: PHB_depoly_PhaZ; TIGR01849"
/db_xref="CDD:130908"
misc_feature complement(76478..77086)
/locus_tag="MA5_00345"
/note="PHB de-polymerase C-terminus; Region: PHB_depo_C;
pfam06850"
/db_xref="CDD:148454"
gene complement(78261..79142)
/locus_tag="MA5_00350"
/db_xref="GeneID:12006962"
CDS complement(78261..79142)
/locus_tag="MA5_00350"
/note="COG0084 Mg-dependent DNase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404350.1"
/db_xref="GI:383486670"
/db_xref="GeneID:12006962"
/translation="MLIDSHCHLNLLTNFSSCGSITISSKNIKTTNSSCFFDTKMYDT
VFLDSFIQRALENNVQYIQTICTKLEDLPIVLKIAEQYKNVFASVGVHPCEVNDKKRL
ITDLEIIELTNHQKIIGIGETGLDYYHQPYNKKLQRDSFIAHISAASATNLPIIVHTR
EADEDTIDILTSAMHNSKFSGLIHCFASSKNLAAKMLDIGLYISVSGIITFKNATNLQ
EIVKYIPLDRLLIETDSPYLAPTPMRGKQNEPAFVRYVAEKVAELKNITSQEVENVTT
HNFKILFSKFEKQVSLI"
misc_feature complement(78291..79139)
/locus_tag="MA5_00350"
/note="TatD like proteins; E.coli TatD is a cytoplasmic
protein, shown to have magnesium dependent DNase activity;
Region: TatD_DNAse; cd01310"
/db_xref="CDD:30053"
misc_feature complement(order(78441..78443,78591..78593,78669..78671,
79119..79121,79125..79127))
/locus_tag="MA5_00350"
/note="active site"
/db_xref="CDD:30053"
gene complement(79268..80794)
/locus_tag="MA5_00355"
/db_xref="GeneID:12006963"
CDS complement(79268..80794)
/locus_tag="MA5_00355"
/EC_number="6.1.1.10"
/note="COG0143 Methionyl-tRNA synthetase"
/codon_start=1
/transl_table=11
/product="methionyl-tRNA synthetase"
/protein_id="YP_005404351.1"
/db_xref="GI:383486671"
/db_xref="GeneID:12006963"
/translation="MKNTYYITTPIYYVNDVAHIGHAYTSVASDVIARFMRFCGKDVM
FLTGTDEHGQKVEKAAINQNIDPQTFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKK
AVAVFWKKLLDNGAIYEGFYEGWYSVRDEAFYDESEINEDKLAPTGAPVEWVKEPSYF
FNLAKWQDKLLEFYELNPDFVRPISRRNEVISFIKSGLKDLSISRTTFHWGIKVPNNR
KHVIYVWLDALVNYISALGYPDKQSNYAKFWPANLQIVGKDILRFHAVYWPAFLMAAE
IPLPKAIMVHGWWTNEGQKISKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADANF
ARNNLITRINSELSNKIGNLLHRIVSFVYKNNDAKVPLIKSGVIDKIYELPILKTAIK
FAQENILLMDKTEINKILENIINLAEDANIYITNEAPWNLKTTDPDKMLEVLYSLLEV
LRYIAIMLQPFVPNSANKMLDQLGVSKEERLFKHLVRDHALKAGSNILEPSIIFPKFN
"
misc_feature complement(79274..80788)
/locus_tag="MA5_00355"
/note="methionyl-tRNA synthetase; Reviewed; Region:
PRK11893"
/db_xref="CDD:237012"
misc_feature complement(79793..80785)
/locus_tag="MA5_00355"
/note="catalytic core domain of methioninyl-tRNA
synthetases; Region: MetRS_core; cd00814"
/db_xref="CDD:173907"
misc_feature complement(order(80003..80005,80015..80017,80099..80101,
80108..80113,80120..80122,80645..80647,80756..80758,
80762..80767))
/locus_tag="MA5_00355"
/note="active site"
/db_xref="CDD:173907"
misc_feature complement(80729..80740)
/locus_tag="MA5_00355"
/note="HIGH motif; other site"
/db_xref="CDD:173907"
misc_feature complement(79898..79912)
/locus_tag="MA5_00355"
/note="KMSKS motif; other site"
/db_xref="CDD:173907"
misc_feature complement(79376..79768)
/locus_tag="MA5_00355"
/note="Anticodon-binding domain of methionyl tRNA
synthetases; Region: Anticodon_Ia_Met; cd07957"
/db_xref="CDD:153411"
misc_feature complement(order(79505..79507,79520..79525,79529..79534,
79691..79696,79703..79708,79715..79720,79727..79732,
79739..79744,79763..79765))
/locus_tag="MA5_00355"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153411"
misc_feature complement(order(79505..79507,79523..79525,79691..79696,
79703..79708,79715..79720,79727..79732,79742..79744))
/locus_tag="MA5_00355"
/note="anticodon binding site; other site"
/db_xref="CDD:153411"
gene complement(80791..81402)
/gene="tmk"
/locus_tag="MA5_00360"
/db_xref="GeneID:12006964"
CDS complement(80791..81402)
/gene="tmk"
/locus_tag="MA5_00360"
/EC_number="2.7.4.9"
/note="COG0125 Thymidylate kinase"
/codon_start=1
/transl_table=11
/product="thymidylate kinase"
/protein_id="YP_005404352.1"
/db_xref="GI:383486672"
/db_xref="GeneID:12006964"
/translation="MNKLTQGKFITFEGVDGIGKSTQSKMLYEYLKSQKIPVILTREV
GGTTVAEKMREILVNEELLPMSELLQAMAARYDHMARKIIPALKDGYIVICDRFIDST
ACYQGLELENGIDLVYSLHKTLMPSLMPDITFFIDVEPHTAIKRVNARNMSNKFDIRS
IDFYKKIYTCFKELSNRFPERIKTIKASHLSPLEVHELIQKHL"
misc_feature complement(80794..81390)
/gene="tmk"
/locus_tag="MA5_00360"
/note="thymidylate kinase; Validated; Region: tmk;
PRK00698"
/db_xref="CDD:234814"
misc_feature complement(80794..81381)
/gene="tmk"
/locus_tag="MA5_00360"
/note="Thymidine monophosphate kinase (TMPK), also known
as thymidylate kinase, catalyzes the phosphorylation of
thymidine monophosphate (TMP) to thymidine diphosphate
(TDP) utilizing ATP as its preferred phophoryl donor. TMPK
represents the rate-limiting step...; Region: TMPK;
cd01672"
/db_xref="CDD:238835"
misc_feature complement(order(80953..80955,81088..81090,81112..81117,
81178..81180,81190..81192,81340..81342))
/gene="tmk"
/locus_tag="MA5_00360"
/note="TMP-binding site; other site"
/db_xref="CDD:238835"
misc_feature complement(order(80842..80844,80965..80967,81337..81339))
/gene="tmk"
/locus_tag="MA5_00360"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:238835"
gene 81947..83263
/locus_tag="MA5_00365"
/db_xref="GeneID:12006965"
CDS 81947..83263
/locus_tag="MA5_00365"
/note="COG0477 Permeases of the major facilitator
superfamily"
/codon_start=1
/transl_table=11
/product="proline/betaine transporter (proP4)"
/protein_id="YP_005404353.1"
/db_xref="GI:383486673"
/db_xref="GeneID:12006965"
/translation="MSNSLSKRDFSIIIGNAMDHFDTALYGFLAPLLASFFFPNHDKV
VALILTYSVLATSLFTRPIGSYFFGVIAKKYGSIFALSHSLIGIAYTTVLIGLIPSHA
QIGWFAPLLLVVLRILQGIYSEGECAIAQLVILENKEEKKAFKASYLYQTSTMLGIIL
ASFISSIVLNLEYNEYWRLCFIFGGLTGFIGAFLRKSETMVFNDLVTEPSKSLNNLDL
VIKQRDNIMVMCTFAEMKFLNDLTTIWNNKLSILRISVAVGFSYMSYSVPFVFMNSFI
PLITNISIAKMMEFNTEFLIFDMVMIPIIGHLTKKLNYHKILNGTLIIMSLSIIPLWL
FLNNASIWYVHFVRIWIIILGVSFLAPLNCWLNNLFKTNDKYMLVGIGSSIGASLIGR
LTSSICLMLWHITNNSLSIGIYIAIVSMITLCAVKRVVTTSCMTKQ"
misc_feature 81989..83215
/locus_tag="MA5_00365"
/note="metabolite-proton symporter; Region: 2A0106;
TIGR00883"
/db_xref="CDD:188094"
misc_feature 82103..>82528
/locus_tag="MA5_00365"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(83297..84145)
/gene="ubiA"
/locus_tag="MA5_00370"
/db_xref="GeneID:12006966"
CDS complement(83297..84145)
/gene="ubiA"
/locus_tag="MA5_00370"
/note="COG0382 4-hydroxybenzoate polyprenyltransferase and
related prenyltransferases"
/codon_start=1
/transl_table=11
/product="4-hydroxybenzoate polyprenyltransferase"
/protein_id="YP_005404354.1"
/db_xref="GI:383486674"
/db_xref="GeneID:12006966"
/translation="MLMLNKLLIIFKLMRADKPVAYLLVFFPALFGLLLANPSNMELA
YLLPLFIFGSITARSSGCIINDIFDRKFDKYVERTKKRPLASGAVSVFYAIFILLILS
IISLSILLLLNKTAIYTGFFAVIMIILYPLMKRITYFPQIFLGFTFKLGVLVAYGAVQ
DKLDTEAIIMYLACCFWAIGYDTIYGYMDIKDDKKIGVKSLSIYLENKNPKFWLYICY
IGFILLFILATKIANFNIDYLPVLAALILLILQIATLDIKNPVNCIKRFSANNYVGVL
LIMAFC"
misc_feature complement(83300..84145)
/gene="ubiA"
/locus_tag="MA5_00370"
/note="4-hydroxybenzoate polyprenyltransferase; Reviewed;
Region: ubiA; PRK12847"
/db_xref="CDD:237228"
misc_feature complement(83459..84082)
/gene="ubiA"
/locus_tag="MA5_00370"
/note="UbiA prenyltransferase family; Region: UbiA;
pfam01040"
/db_xref="CDD:216260"
gene 85027..87471
/gene="valS"
/locus_tag="MA5_00375"
/db_xref="GeneID:12006967"
CDS 85027..87471
/gene="valS"
/locus_tag="MA5_00375"
/EC_number="6.1.1.9"
/note="COG0525 Valyl-tRNA synthetase"
/codon_start=1
/transl_table=11
/product="valyl-tRNA synthetase"
/protein_id="YP_005404355.1"
/db_xref="GI:383486675"
/db_xref="GeneID:12006967"
/translation="MKEFPKHYNFTENEKKWQNIWQELQIYAYDPNISKAEIYIVDTP
PPTVSGQLHIGHIYSYTQTDFIVRFQRMIGKNIFYPIGFDDNGLPTERLVEKQKQIKA
YNMERDEFIKICLEVVKNEEAKFRSLFKQIALSVDWSLEYQTISPLSRKISQMSFLDL
LHKGEVYRANQPILWDTVDGTALAQADIEDKQKISSMNYITFKTEQGDQLTIATTRPE
LLPACVAVFYHPDDVRYKHLADKSAITPLFNEKVPILADPLVQQDKGTGLVMCCTFGD
QTDITWWKSHNLPLKTIITKKGTINFPHKLDIDGLTIKEARTKIIDILKEQSLLTKQE
EIIQTVKCAERSGAPLEILTVTQWFIKTITHKEALLKRTNELNWYPKNMKMRLENWIN
SLSWDWCISRQRYFGVPFPIWYSKRIGEEGKILYADISQLPVDPLKDLPIGYSKEEVD
PDLDVMDTWATSSVSPQLSTYGISEDLAINKVRHDKLFPMDLRPQAHEIIRTWAFYTI
LKSHLHQNILPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLERYGADVIRYWSANS
KLGADTAYSEDVMKNGKRLVNKLWNAAKFVSIHFDKLTSEDKKVSLFDIKEKITNEFD
QWMINKLVALVKLATNALQNYEYANAIYLTEKFFWSIFCDNYLEISKTRSYDEANKNP
QGQYSSILTLYHIMQTLLKLFAPFMPHITEELYQILYNKNSIHMQGNWINYGDLNYEI
DVQGPEGLLEILDIVRKFKAEYNLSIKAPIKLLEVSGIVLSTELVEDLKNVISAEEIQ
FKAKDDQIKVNIKLFV"
misc_feature 85027..87456
/gene="valS"
/locus_tag="MA5_00375"
/note="valyl-tRNA synthetase; Reviewed; Region: valS;
PRK13208"
/db_xref="CDD:183895"
misc_feature 85135..>85590
/gene="valS"
/locus_tag="MA5_00375"
/note="nucleotidyl transferase superfamily; Region:
nt_trans; cl00015"
/db_xref="CDD:212170"
misc_feature 85183..85194
/gene="valS"
/locus_tag="MA5_00375"
/note="active site"
/db_xref="CDD:173912"
misc_feature 85183..85194
/gene="valS"
/locus_tag="MA5_00375"
/note="HIGH motif; other site"
/db_xref="CDD:173912"
misc_feature order(85183..85185,85192..85194)
/gene="valS"
/locus_tag="MA5_00375"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:173912"
misc_feature <85753..85998
/gene="valS"
/locus_tag="MA5_00375"
/note="Leucyl-tRNA synthetase, Domain 2; Region:
tRNA-synt_1_2; pfam13603"
/db_xref="CDD:205781"
misc_feature <86056..86748
/gene="valS"
/locus_tag="MA5_00375"
/note="catalytic core domain of valyl-tRNA synthetases;
Region: ValRS_core; cd00817"
/db_xref="CDD:185677"
misc_feature order(86401..86403,86410..86412,86509..86514,86518..86523,
86533..86535,86602..86613,86635..86637)
/gene="valS"
/locus_tag="MA5_00375"
/note="active site"
/db_xref="CDD:185677"
misc_feature 86632..86646
/gene="valS"
/locus_tag="MA5_00375"
/note="KMSKS motif; other site"
/db_xref="CDD:185677"
misc_feature 86746..87180
/gene="valS"
/locus_tag="MA5_00375"
/note="Anticodon-binding domain of valyl tRNA synthetases;
Region: Anticodon_Ia_Val; cd07962"
/db_xref="CDD:153416"
misc_feature order(86749..86751,86755..86760,86767..86769,86773..86778,
86785..86790,86797..86802,86806..86811,86971..86973,
86980..86982,87001..87003,87025..87030,87037..87039)
/gene="valS"
/locus_tag="MA5_00375"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153416"
misc_feature order(86788..86790,86797..86802,86806..86811,87013..87015,
87025..87030,87037..87039)
/gene="valS"
/locus_tag="MA5_00375"
/note="anticodon binding site; other site"
/db_xref="CDD:153416"
gene 87434..88327
/locus_tag="MA5_00380"
/db_xref="GeneID:12006968"
CDS 87434..88327
/locus_tag="MA5_00380"
/note="COG3475 LPS biosynthesis protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404356.1"
/db_xref="GI:383486676"
/db_xref="GeneID:12006968"
/translation="MIKLKSILNFLYNITNRDGFKGYKECNAAAYKNVCNDSSTKSTS
KLALIISYTQNLLSFKNIIGLMLIIFAGILFYAYILQHEWQYVTLSDEQVKKYRISEK
KALSLYQLMKDTHELLTKNNIKYWIESGTLLGAVRHQGIIPFDDDLDIGIMHEDEIHL
QQILPQFEQLGYRVKHNKIYVICGERCLDIFLFHKEKDKFIHVIYDKYPNDFFYDHEL
YPLKKYKFGSIEVYGPSDPIGNLNRQYPEWDKYAIIYSPHSLHLPFLSNIEKKTKFIL
TPELLKPAQPLGPLEDRVNLF"
misc_feature 87464..87577
/locus_tag="MA5_00380"
/note="Rickettsial palindromic element RPE1 domain;
Region: RPE1; TIGR01045"
/db_xref="CDD:162172"
misc_feature 87596..88324
/locus_tag="MA5_00380"
/note="LPS biosynthesis protein [Cell envelope biogenesis,
outer membrane]; Region: COG3475"
/db_xref="CDD:33278"
gene 88370..89170
/locus_tag="MA5_00385"
/db_xref="GeneID:12006969"
CDS 88370..89170
/locus_tag="MA5_00385"
/note="COG3475 LPS biosynthesis protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404357.1"
/db_xref="GI:383486677"
/db_xref="GeneID:12006969"
/translation="MMKLNTVLSFKNIIGLMLIIFAGILFYAYILQHEWQYVTLSDEQ
VKKYRISGKKALSLYQLMKDTHELLTKNNIKYWIESGTLLGAVRHQGIIPFDDDLDIG
IMHEDEIHLQQILPQFEQLGYTVSYERAYNICKKTCLDIFIVHKEKNKFIYTNIMLRD
KYPEHFFYDHELYPLKKYKFGSIEVYGPSDPIGNLNRQYPEWDKYAIIYSPHSLHLPF
LSNIEKKTKFILTPELLKPAQPLGPLEDNVNIVNSAKFIRIYKDIDDH"
misc_feature 88373..89122
/locus_tag="MA5_00385"
/note="LPS biosynthesis protein [Cell envelope biogenesis,
outer membrane]; Region: COG3475"
/db_xref="CDD:33278"
gene 89235..90515
/locus_tag="MA5_00390"
/db_xref="GeneID:12006970"
CDS 89235..90515
/locus_tag="MA5_00390"
/note="COG1322 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404358.1"
/db_xref="GI:383486678"
/db_xref="GeneID:12006970"
/translation="MPSLLLLTTTILLILCVLIIWFYIKTHTLKRQLQFLSEQNLEIN
NNNRLLNQEKIAYLQKIEQLKCKVEYQEQMIKDSEKIREESFTSAKAALFDLGKDLSK
QLIEIHKIENNTARELAEQNITTASRKFNSELERLITMVGALNKDIEQSKSTVDLIKQ
SLLSPIGAGLLSEITLENILKSSGLRPNLDFIMQYGLTTSDSVKLRPDAIIFLPSGNL
MVIDSKASKFLVDSQDNSVNLSKTMNYHLKSLANKDYAENILTTLNKKAHNFNNVITL
MFLPTEQAVEKVIAANPEFLQKAWGCNIFPVGPAGLMNMLSFAKFQITDNRRSENYKV
IISEVRKLLSSIGTIADYSKKIGYNLQNMVTNYDKFAASFNRNLMSRVKTIQKLGIDS
GDKAMPATLERYQIVSSKSEIIEVDAENPTQIEE"
misc_feature 89298..90509
/locus_tag="MA5_00390"
/note="Predicted nuclease of restriction endonuclease-like
fold, RmuC family [General function prediction only];
Region: COG1322"
/db_xref="CDD:31513"
misc_feature 89535..90440
/locus_tag="MA5_00390"
/note="RmuC family; Region: RmuC; pfam02646"
/db_xref="CDD:111535"
gene complement(91504..93474)
/locus_tag="MA5_00395"
/db_xref="GeneID:12006971"
CDS complement(91504..93474)
/locus_tag="MA5_00395"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404359.1"
/db_xref="GI:383486679"
/db_xref="GeneID:12006971"
/translation="MSNTLAVISNKLEVMMKYYHDISNLGIRLYKTTKALVSFDLGEV
FKIWFCDKNFKDLKKIDQSVIYTQYLETVLSKIAATGKYQDKHISHSQWINCFETINN
YDDFLHTKLKKLIGIKNKNIIDSILDDIGDINSLEFNIIFSKVQVFLSDNLDKFENLV
QVAKKIDAIVYPLTREYFLYRYLAKSILVAKTLSLHSYSEAEFNIVKKTHLNFTNYLN
SLEQSLTKIEKATNKYNEEHKIASWLTAKSDLVSNHSGKIAATYATLVGGVIALRSYV
IDAKDPWYELCALPSTIFAMLQILASFPGTVLSNRQTKEINNNMFQELKNSDQNAQDI
KFLFDCTPSFANDPINTAASCFRYASNLGLQPIDLLNNDIVNRIILYTALRWSAVAGV
VEEQSKVTNFMQTKLIKFLHHEIVPALIENKKFTSKEIKPYFYLLYKHSAQDRNTQIK
LQTIYHKLTNEDIDLNNIKLDINTYYGWKSVVMCSAMTTLILDYICFYFRNQELEFYE
DPMFYASTSVKFMRLASLLVSTYYGNKLIENITGEKLAHDMFFQKFYYNDAARLTVAI
VPLIMFESIKDLKLLSLATLIDVLTTAISDLNVGNAISSAGKNIAEKTATTLTWLNKI
ASGTNDDTNDDIVIDIAHTEELQPLGCVDISD"
gene complement(94953..96230)
/gene="clpX"
/locus_tag="MA5_00400"
/db_xref="GeneID:12006972"
CDS complement(94953..96230)
/gene="clpX"
/locus_tag="MA5_00400"
/note="COG1219 ATP-dependent protease Clp, ATPase subunit"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease ATP-binding subunit ClpX"
/protein_id="YP_005404360.1"
/db_xref="GI:383486680"
/db_xref="GeneID:12006972"
/translation="MVVDADKKELICSFCSKKQHEVKKLIAGPAVFICDECIDLCTDI
MKEESKVALKQITASIPTPQKICKILNDYVVGQDQAKKILAVAVYNHYKRLEYVQSGN
NDVELNKSNILLIGPTGSGKTLLAQTLAKILDVPFTMADATSLTEAGYVGEDVENILL
RLLISAEFNIAKAQKGIIYIDEVDKIARKSDNPSITRDVSGEGVQQALLKIMEGTVAS
VPPQGGRKHPQQDFVQLDTSNILFICGGAFMGIDRIIRSRTNHSSIGFAANINIDKEK
SNNEILKSLEIEDLTKFGLIPEFIGRLPIITTLDELDKEALITILTKPKNAIVKQYQK
QFELDDADLVIDYSALEAIAEKALVKKTGARGLRSILEHLLLDSMYKVAELKKQRVTI
TKEVVDGLIEPCMTSIISTKLNKKQPIIEDIPA"
misc_feature complement(95022..96230)
/gene="clpX"
/locus_tag="MA5_00400"
/note="ATP-dependent protease ATP-binding subunit ClpX;
Provisional; Region: clpX; PRK05342"
/db_xref="CDD:235422"
misc_feature complement(96087..96203)
/gene="clpX"
/locus_tag="MA5_00400"
/note="ClpX C4-type zinc finger; Region: zf-C4_ClpX;
pfam06689"
/db_xref="CDD:203502"
misc_feature complement(<95592..96008)
/gene="clpX"
/locus_tag="MA5_00400"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(95862..95885)
/gene="clpX"
/locus_tag="MA5_00400"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(95688..95690,95859..95882))
/gene="clpX"
/locus_tag="MA5_00400"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(95685..95702)
/gene="clpX"
/locus_tag="MA5_00400"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(95046..95297)
/gene="clpX"
/locus_tag="MA5_00400"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; smart01086"
/db_xref="CDD:198154"
gene complement(96345..96896)
/locus_tag="MA5_00405"
/db_xref="GeneID:12006973"
CDS complement(96345..96896)
/locus_tag="MA5_00405"
/note="COG1670 Acetyltransferases, including N-acetylases
of ribosomal proteins"
/codon_start=1
/transl_table=11
/product="ribosomal-protein-alanine acetyltransferase
(rimJ)"
/protein_id="YP_005404361.1"
/db_xref="GI:383486681"
/db_xref="GeneID:12006973"
/translation="MINIGYLHTTFPVFDLGNIVLRELAESDVQDYLCYMSRSEMGLY
ITESNRPKDLEEARKEIFYWSNLYTLHRSFYWGIALKTDNKLIGTAGFNIINLEHHRA
EISYDLDPNFWGQGIMLKSIKNILKFADCIGIIRVQATVITDNFRSVNLLERCGFSKE
GILKKYEIIANKHKDYYMYARVV"
misc_feature complement(96354..96866)
/locus_tag="MA5_00405"
/note="Acetyltransferases, including N-acetylases of
ribosomal proteins [Translation, ribosomal structure and
biogenesis]; Region: RimL; COG1670"
/db_xref="CDD:31856"
misc_feature complement(96426..96650)
/locus_tag="MA5_00405"
/note="Acetyltransferase (GNAT) family; Region:
Acetyltransf_1; pfam00583"
/db_xref="CDD:201324"
misc_feature complement(order(96540..96545,96573..96575,96576..96578))
/locus_tag="MA5_00405"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(96893..97576)
/locus_tag="MA5_00410"
/db_xref="GeneID:12006974"
CDS complement(96893..97576)
/locus_tag="MA5_00410"
/note="COG0603 Predicted PP-loop superfamily ATPase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404362.1"
/db_xref="GI:383486682"
/db_xref="GeneID:12006974"
/translation="MKKSVNLLSGGTDSATVLAIASEMCYEIYAMSFNYGQRNNAELR
KVKELIKKYNVKQHKIVDIDLRAFGGSALTDDNIDVPYYHGINALPEIVPVTYVPARN
TIFLSYAVGFAEVIGSQDIFIGVHTSDSANYPDCCPEYIQSFEKMVNLATNMGVQGKK
ITIHAPLIDMTKEQIIRTGLKLGVDYKNTISCYSPTEDDLSCGNCLACIIRLDAFKKN
NIQDPIKYV"
misc_feature complement(96926..97570)
/locus_tag="MA5_00410"
/note="ExsB is a transcription regulator related protein.
It is a subfamily of a Adenosine nucleotide binding
superfamily of proteins. This protein family is
represented by a single member in nearly every completed
large (> 1000 genes) prokaryotic genome. In...; Region:
ExsB; cd01995"
/db_xref="CDD:238953"
misc_feature complement(order(97463..97465,97469..97471,97535..97546,
97550..97558))
/locus_tag="MA5_00410"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:238953"
gene 97923..97999
/locus_tag="MA5_t04315"
/db_xref="GeneID:12006975"
tRNA 97923..97999
/locus_tag="MA5_t04315"
/product="tRNA-His"
/db_xref="GeneID:12006975"
gene 98142..99872
/locus_tag="MA5_00415"
/db_xref="GeneID:12006976"
CDS 98142..99872
/locus_tag="MA5_00415"
/note="COG1132 ABC-type multidrug transport system, ATPase
and permease components"
/codon_start=1
/transl_table=11
/product="transport ATP-binding protein MsbA"
/protein_id="YP_005404363.1"
/db_xref="GI:383486683"
/db_xref="GeneID:12006976"
/translation="MDIKLLYRLAKYLRFYKKDLIIVMISLLSVSASLLLIGSIFRDL
IDRGLAEDNILSVNKSILYICLLIVILSVASFFRSYFINNVAEKIVNQIRKEAYSNLI
NYEIEEYEELKIGDIISRLTNDIDQIATLIVNFLSFFIRNSVMLIGSITLMFFESFKL
ASIVIITIPILLVPLIKFGKHVKALSKKALESKSLLVSDIDETFNNIRVIYAFNHQIN
KIADFDTKLQSYLIYCKTRLKIRALFFAISIAVIFLTITLIVWIGASDIVQGDLSAGQ
IISFIYYAIIAGVSSGGIFELLSEMHLPTTALERIITIIDKTSIVHNNYYALNNSDAI
SIEFKNVDFTYNSRPNLKVINNMSLKINSNKFVGIVGRSGAGKSTLIQLLLRFYRQEN
GTILINNQDISFVKPTDIRKFIAYVPQEASIFSDTIKSNIIFGNNKASDYEINEIIKI
TGIEEFSTKLHDGINTKIGEKGVRLSGGQKQRIAIARALLRKPKILLLDEAMSALDTM
SEQKLLNAIKKIMKGNIIISIAHRISSIESADYILVIDKGGVVTEGSHYDLSKNSEIY
RNICREQLTI"
misc_feature 98145..99863
/locus_tag="MA5_00415"
/note="ABC transporter, permease/ATP-binding protein;
Region: MsbA_rel; TIGR02204"
/db_xref="CDD:131259"
misc_feature 98313..99002
/locus_tag="MA5_00415"
/note="ABC transporter transmembrane region; Region:
ABC_membrane; cl00549"
/db_xref="CDD:207103"
misc_feature 99147..99860
/locus_tag="MA5_00415"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 99252..99275
/locus_tag="MA5_00415"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(99261..99266,99270..99278,99396..99398,99636..99641,
99732..99734)
/locus_tag="MA5_00415"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 99387..99398
/locus_tag="MA5_00415"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature 99564..99593
/locus_tag="MA5_00415"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 99624..99641
/locus_tag="MA5_00415"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 99648..99659
/locus_tag="MA5_00415"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 99720..99740
/locus_tag="MA5_00415"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 100117..100365
/locus_tag="MA5_00420"
/db_xref="GeneID:12006977"
CDS 100117..100365
/locus_tag="MA5_00420"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404364.1"
/db_xref="GI:383486684"
/db_xref="GeneID:12006977"
/translation="MKNLLKILLIIAFANPVFASSMQMPDPASVTTTQIHAMSTNAQQ
DWIASLTANQYNMLSPDVQKWVMENTTDAQKQALGINQ"
misc_feature 100117..100311
/locus_tag="MA5_00420"
/note="Protein of unknown function (DUF2673); Region:
DUF2673; pfam10880"
/db_xref="CDD:220895"
gene 100894..102069
/locus_tag="MA5_00425"
/db_xref="GeneID:12006978"
CDS 100894..102069
/locus_tag="MA5_00425"
/note="COG0477 Permeases of the major facilitator
superfamily"
/codon_start=1
/transl_table=11
/product="bicyclomycin resistance protein (bcr2)"
/protein_id="YP_005404365.1"
/db_xref="GI:383486685"
/db_xref="GeneID:12006978"
/translation="MQLLITVIFMEILAGSEIDLFIPSFPEIQGTFNLSTFMTELLLG
VNLISYCITSLIVGNLGDKYGRRPIIIIGLLIFNLGSLFCVFANNYEIILFGRFFQGC
GIAPVAVLVYVVLADIYSIQEQQKLMGILNGTIALSMAVAPVIGSYVNLFWGWRANFI
LLLSVGLISLILGIFFIPKGQINKKISVSLKEYIPIFKSPKAIYYILTMIFLAQGYWI
FIGIAPILYMQDLGVTLEYFGLYQGAMAALFSIMSFSSGYCFKKFGIKNCFYFGVIFI
ILFLLGNSILIIYNINNPLTITIVTLLLSLGVIYPINILWPLLLEAIANGKARMTAIF
TAARLILTAFGLQLVGFLYDGTFTPIGITISIVTLFGLVTLHKLFKYDKIFEISEIV"
misc_feature 100903..>101364
/locus_tag="MA5_00425"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(100945..100947,100954..100962,100966..100971,
101020..101022,101029..101034,101041..101043,
101053..101058,101062..101067,101203..101208,
101215..101220,101227..101232,101239..101241,
101275..101280,101287..101292,101308..101310)
/locus_tag="MA5_00425"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 102182..103429
/locus_tag="MA5_00430"
/db_xref="GeneID:12006979"
CDS 102182..103429
/locus_tag="MA5_00430"
/note="COG4591 ABC-type transport system, involved in
lipoprotein release, permease component"
/codon_start=1
/transl_table=11
/product="lipoprotein releasing system, transmembrane
protein"
/protein_id="YP_005404366.1"
/db_xref="GI:383486686"
/db_xref="GeneID:12006979"
/translation="MINNNFSFNIAFRYFRAKKNEKFVSIIAAFSLVGVMIGVAALIV
VMSVMNGFHLELTKNIIGLNGDIVINRQGDNIDNYEEIKTTLLKQDYVKHVTYIAHGQ
ALALGKSNNSGVLVKGIKLNDLSLRNGIFKNVNFGSFDNFHGKNVIALGEQLASNLGV
TVGEKLRLISPNSVSTAFGSIPRSKEFQIIAIFNSGMYDYDLTTILMPLTAAQNFLSL
GNDINSIEINSLDPDQAITYSYKIQSLLGPNLYVFNWKTLNSQFLSALAVERTAMFTI
LSLIITVAAFNIISNLFMLVKDKTSDIAILRTMGASTKQIMVIFIYNGMFIGLLGTTL
GVILGVTFSYNIQTIKNYLERITGIKIFEAAIYFLYSLPSKVKTDDIILITSLSIILC
FLATIYPSYRASKLNPVDALRYE"
misc_feature 102194..103426
/locus_tag="MA5_00430"
/note="lipoprotein releasing system, transmembrane
protein, LolC/E family; Region: lolCE; TIGR02212"
/db_xref="CDD:233781"
misc_feature 102212..102886
/locus_tag="MA5_00430"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:221725"
misc_feature 103007..103405
/locus_tag="MA5_00430"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:217187"
gene 103422..104087
/locus_tag="MA5_00435"
/db_xref="GeneID:12006980"
CDS 103422..104087
/locus_tag="MA5_00435"
/note="COG1136 ABC-type antimicrobial peptide transport
system, ATPase component"
/codon_start=1
/transl_table=11
/product="lipoprotein releasing system ATP-binding protein
LolD"
/protein_id="YP_005404367.1"
/db_xref="GI:383486687"
/db_xref="GeneID:12006980"
/translation="MNNIVLILKMISKHYKQGNTIVRVLDGLNLTANEGELIAIIGSS
GSGKSTLLHIAGLLDKPTNGQVIIPNIKYKKYHLIRLYYLGFIYQQHHLLKDFTALEN
VIIPRLIRGLDQKEAIKDATKILDDLGLEKKLYNMPGELSGGEQQRVAIARSLINKPR
IILADEPTGNLDPNTTNEVFNLFLKVARKQNTTVIMVTHNHELAHKMDKLYNLKHGLL
NIA"
misc_feature 103434..104069
/locus_tag="MA5_00435"
/note="ABC-type antimicrobial peptide transport system,
ATPase component [Defense mechanisms]; Region: SalX;
COG1136"
/db_xref="CDD:224059"
misc_feature 103437..104075
/locus_tag="MA5_00435"
/note="ATP-binding cassette domain of the transporters
involved in export of lipoprotein and macrolide, and cell
division protein; Region: ABC_MJ0796_LolCDE_FtsE; cd03255"
/db_xref="CDD:213222"
misc_feature 103545..103568
/locus_tag="MA5_00435"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213222"
misc_feature order(103554..103559,103563..103571,103686..103688,
103914..103919,104016..104018)
/locus_tag="MA5_00435"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213222"
misc_feature 103677..103688
/locus_tag="MA5_00435"
/note="Q-loop/lid; other site"
/db_xref="CDD:213222"
misc_feature 103842..103871
/locus_tag="MA5_00435"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213222"
misc_feature 103902..103919
/locus_tag="MA5_00435"
/note="Walker B; other site"
/db_xref="CDD:213222"
misc_feature 103926..103937
/locus_tag="MA5_00435"
/note="D-loop; other site"
/db_xref="CDD:213222"
misc_feature 104004..104024
/locus_tag="MA5_00435"
/note="H-loop/switch region; other site"
/db_xref="CDD:213222"
gene 106214..107488
/locus_tag="MA5_00450"
/db_xref="GeneID:12006981"
CDS 106214..107488
/locus_tag="MA5_00450"
/note="COG4536 Putative Mg2+ and Co2+ transporter CorB"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404368.1"
/db_xref="GI:383486688"
/db_xref="GeneID:12006981"
/translation="MTTILVIVIIIMISLSALFAATETAITASSPGKIHKLKIAGNKR
AKTVLEVLKKKEKVIGTLLIGNSLINTICTTIATTLFISLLGNNGTIVASGVMAFIII
VFAEVVPKAIAVAKPEQLTLKMSSTIVIFLKLFKPINIALDYITKIFCFIFRINLNPQ
ISGTEEVRGVIEHYHQEGGVYKSERNMLGGILDIRNMTVSEIMTHRSNIIALNIDLPY
ELIIKTLLSGAHTRIPLWQDNRDNIIGILNLKDLLKALYENNNDDKKVDINTLLTPPW
FIPDNALVVDQLHAFRERNNHFACVVDEYGTLLGIITLEDVIEEIVGPITDEHDRLNN
EIIQESNTEFIIKGTTTIRDINRELDWNLSDEDANTIAGLIIHKIARIPNQGEVIKIF
NFKIIILKKIANKIDSVKITVLPMTEETISSE"
misc_feature 106262..107476
/locus_tag="MA5_00450"
/note="Putative Mg2+ and Co2+ transporter CorB [Inorganic
ion transport and metabolism]; Region: CorB; COG4536"
/db_xref="CDD:34183"
misc_feature 106262..106765
/locus_tag="MA5_00450"
/note="Domain of unknown function DUF21; Region: DUF21;
pfam01595"
/db_xref="CDD:201879"
misc_feature 106832..107173
/locus_tag="MA5_00450"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains associated
with the CorC_HlyC domain. CorC_HlyC is a transporter
associated domain. This small domain is found in Na+/H+
antiporters, in proteins involved in...; Region:
CBS_pair_CorC_HlyC_assoc; cd04590"
/db_xref="CDD:73090"
misc_feature 107222..107455
/locus_tag="MA5_00450"
/note="Transporter associated domain; Region: CorC_HlyC;
smart01091"
/db_xref="CDD:198159"
gene 107640..109493
/locus_tag="MA5_00455"
/db_xref="GeneID:12006982"
CDS 107640..109493
/locus_tag="MA5_00455"
/note="COG1138 Cytochrome c biogenesis factor"
/codon_start=1
/transl_table=11
/product="cytochrome C-type biogenesis protein CCMF
(ccmF)"
/protein_id="YP_005404369.1"
/db_xref="GI:383486689"
/db_xref="GeneID:12006982"
/translation="MTQAITFYASSLCSIFAFCTLVYAFITSDFSVQNVFLHSSTLKP
LIYKISGSWSSHEGSMLLWFCLLQIVSCCYIFCLEDKMLKFSSIIILSAIQLLFSSFI
YFTSNPFHMFSFVPKEGLGLNPMLQDIALSIHPPLLYLGYVSYAVPFTIVCAIFLIAV
ISRLDNNLPDYFTGYKITQLSDRITSIRLLKIFAGCGILFTTIGISLGSWWAYRELNW
GGLWFFDPVENISLFPWLSGIMLHHSIIVTTKTNRMQHWTIILSIITFLLVIFSTFLV
RSGFINSIHAFAFSSERWIYLLVILCIIGIGGLYVIIRLNNCSIEKTIYNTFNWNTHS
NCNMTIKEKAILIGNIFFLFSLIILICATLYPTIYALFNDKPIIINEEFFIKNFIIFV
IPILCTIGLFTTNSSIKKHIIMLMLSLIITYFILLNIKFSVISILTIMTSIFLMLHNV
HYLLVKTNYFRNSLKASSTSMILGHFGVALIAFSITMNSLLQSEMDFIGEVGTSKTFN
AFKVTLQNIKFAQGKNYYRQIAEFWLEDHKNNITILKPENRFYIIEQKLSQESDIHSY
LLYDLYAVLSNIDGKIIHAKIYYKPMMSFIWIGVILTTAGFVIALIRKNSY"
misc_feature 107649..109490
/locus_tag="MA5_00455"
/note="Cytochrome c biogenesis factor [Posttranslational
modification, protein turnover, chaperones]; Region: CcmF;
COG1138"
/db_xref="CDD:31333"
gene complement(111397..116328)
/locus_tag="MA5_00460"
/db_xref="GeneID:12006983"
CDS complement(111397..116328)
/locus_tag="MA5_00460"
/note="COG4625 Uncharacterized protein with a C-terminal
OMP (outer membrane protein) domain"
/codon_start=1
/transl_table=11
/product="cell surface antigen (sca5)"
/protein_id="YP_005404370.1"
/db_xref="GI:383486690"
/db_xref="GeneID:12006983"
/translation="MAQKPNFLKKIISAGLVTASTATIVAGFSGVAMGAAMQYNRTTN
AAATTFDGIGFDQAAGANIPVAPNSVITANANNPITFNTPNGHLNSLFLDTANDLAVT
INEDTTLGFITNIAQQAKFFNFTVAAGKILNITGQGITVQEASNTINAQNALTKVHGG
AAINANDLSGLGSITFAAAPSVLEFNLINPTTQEAPLTLGANSKIVNGGNGILNITNG
FIQVSDNTFAGIKTINIDDCQGLMFNSTPDAANTLNLQVGGNTINFNGIDGTGKLVLV
SKNGAATEFNVTGTLGGNLKGIIELNTAAVAGKLISQGGAANAVIGTDNGAGRAAGFI
VSVDNGNAATISGQVYAKNMVIQSANAGGQVTFEHIVDVGLGGTTNFKTADSKVIITE
NSNFGSTNFGNLDTQIVVPDTKILKGNFIGDVKNNGNTAGVITFNANGALVSASTDPN
IAVTNINAIEAEGAGVVELSGIHIAELRLGNGGSIFKLADGTVINGPVNQNALMNNNA
LAAGSIQLDGSAIITGDIGNGGVNAALQHITLANDASKILALDGANIIGANVGGAIHF
QANGGTIKLTNTQNNIVVNFDLDITTDKTGVVDASSLTNNQTLTINGSIGTVVANTKT
LAQLNIGSSKTILNAGDVAINELVIENNGSVQLNHNTYLITKTINAANQGQIIVAADP
LNTNTTLADGTNLGSAENPLSTIHFATKAANADSILNVGKGVNLYANNITTNDANVGS
LHFRSGGTSIVSGTVGGQQGHKLNNLILDNGTTVKFLGDTTFNGGTKIEGKSILQISN
NYTTDHVESADNTGTLEFVNTDPITVTLNKQGAYFGVLKQVIISGPGNIVFNEIGNVG
IVHGIAANSISFENASLGTSLFLPSGTPLDVLTIKSTVGNGTVDNFNAPIVVVSGIDS
MINNGQIIGDKKNIIALSLGSDNSITVNANTLYSGIRTTKNNQGTVTLSGGMPNNPGT
IYGLGLENGSPKLKQVTFTTDYNNLGSIIANNVTINDDVTLTTGGIAGTDFDAKITLG
SVNGNANVRFVDSTFSDPRSMIVATQANKGTVTYLGNALVSNIGSLDTPVASVRFTGN
DSGAGLQGNIYSQNIDFGTYNLTILNSNVILGGGTTAINGEIDLLTNNLIFANGTSTW
GDNTSISTTLNVSSGNIGQVVIAEDAQVNATTTGTTTIKIQDNANANFSGTQAYTLIQ
GGARFNGTLGAPNFAVTGSNIFVKYELIRDSNQDYVLTRTNDVLNVVTTAVGNSAIAN
APGVSQNISRCLESTNTAAYNNMLLAKDPSDVATFVGAIATDTSAAVTTVNLNDTQKT
QDLLSNRLGTLRYLSNAETSDVAGSATGAVSSGDEAEVSYGVWAKPFYNIAEQDKKGG
IAGYKAKTTGVVVGLDTLASDNLMIGAAIGITKTDIKHQDYKKGDKTDINGLSFSLYG
SQQLVKNFFAQGNAIFTLNKVKSKSQRYFFESNGKMSKQIAAGNYDNMTFGGNLIFGY
DYNAMPNVLVTPMAGLSYLKSSNENYKETGTTVANKRINSKFSDRVDLIVGAKVAGST
VNITDIVIYPEIHSFVVHKVNGKLSNSQSMLDGQTAPFISQPDRTAKTSYNIGLSANI
KSDAKMEYGIGYDFNSASKYTAHQGTLKVRVNF"
misc_feature complement(113566..114216)
/locus_tag="MA5_00460"
/note="Rickettsia outer membrane protein B; Region: rOmpB;
pfam12334"
/db_xref="CDD:152769"
misc_feature complement(111400..112716)
/locus_tag="MA5_00460"
/note="outer membrane autotransporter barrel domain;
Region: autotrans_barl; TIGR01414"
/db_xref="CDD:162346"
misc_feature complement(111430..112239)
/locus_tag="MA5_00460"
/note="Autotransporter beta-domain; Region:
Autotransporter; smart00869"
/db_xref="CDD:197937"
gene complement(117696..118640)
/locus_tag="MA5_00465"
/db_xref="GeneID:12006984"
CDS complement(117696..118640)
/locus_tag="MA5_00465"
/note="COG1472 Beta-glucosidase-related glycosidases"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404371.1"
/db_xref="GI:383486691"
/db_xref="GeneID:12006984"
/translation="MKIRQTAKPVIIGISGPELTDAERELFEEHNPLGIILFRRNIRK
NEKGEQDKAALIKLIADIKEVLGDNTIIAIDQEGGMVKRLIAPTFYDAPAAQTFTELQ
TCKYNYSTIAKELREVGINLDFAPVADLIHDGADKIISDRSFGKEPEIVVPLFLSAIA
GLQEEKVTACIKHIPGHGRATVDSHIELPIIDTSLKTLEDTDFKVFKELAKYDYIKLA
MTAHVIYTALDPDNPATLSQIVIDYIKSNIGFKGLIISDTIEMQALSGSMADITKGAL
DAGVDIVLECTGEFNKMSEVLGSVAENSIDKFSDLFIS"
misc_feature complement(<117741..118634)
/locus_tag="MA5_00465"
/note="Beta-glucosidase-related glycosidases [Carbohydrate
transport and metabolism]; Region: BglX; COG1472"
/db_xref="CDD:224389"
misc_feature complement(117783..118616)
/locus_tag="MA5_00465"
/note="Glycosyl hydrolase family 3 N terminal domain;
Region: Glyco_hydro_3; cl07971"
/db_xref="CDD:244837"
gene complement(118685..119158)
/locus_tag="MA5_00470"
/db_xref="GeneID:12006985"
CDS complement(118685..119158)
/locus_tag="MA5_00470"
/note="COG0789 Predicted transcriptional regulators"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404372.1"
/db_xref="GI:383486692"
/db_xref="GeneID:12006985"
/translation="MINNKLTKKYYVASEVIRILNIALHKLRYLETKIPGLSHYKINN
RKYYTAHDIDLLQKFLFVSRREEYLEKCGYHRSDKDYLANFSNIHCASDTSRQNEFQG
KNSECILNLHVQQRQDSQSAVVLSLMDNTVSSRIDILLTNFHNLSIQIKKILLIS"
misc_feature complement(<118988..119128)
/locus_tag="MA5_00470"
/note="Predicted transcriptional regulators
[Transcription]; Region: SoxR; COG0789"
/db_xref="CDD:31132"
misc_feature complement(<118985..119119)
/locus_tag="MA5_00470"
/note="Helix-Turn-Helix DNA binding domain of
transcription regulators from the MerR superfamily;
Region: HTH_MerR-SF; cl02600"
/db_xref="CDD:207663"
misc_feature complement(order(119021..119029,119075..119077,
119117..119119))
/locus_tag="MA5_00470"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:133389"
misc_feature complement(118763..118897)
/locus_tag="MA5_00470"
/note="Rickettsial palindromic element RPE3 domain;
Region: RPE3; TIGR03775"
/db_xref="CDD:163487"
gene complement(119353..119640)
/locus_tag="MA5_00475"
/db_xref="GeneID:12006986"
CDS complement(119353..119640)
/locus_tag="MA5_00475"
/note="COG0776 Bacterial nucleoid DNA-binding protein"
/codon_start=1
/transl_table=11
/product="integration host factor alpha-subunit (himA)"
/protein_id="YP_005404373.1"
/db_xref="GI:383486693"
/db_xref="GeneID:12006986"
/translation="MTITKNKISLMLSSKLGFSNNLCEAIVNTVFSNILEIAKVQKLT
LKNFGSFEVKQKTPRPGINFHTKSPVMIASKKNLRFTPSEKLKALINKSML"
misc_feature complement(119374..119631)
/locus_tag="MA5_00475"
/note="Integration host factor (IHF) and HU are small
heterodimeric members of the DNABII protein family that
bind and bend DNA, functioning as architectural factors in
many cellular processes including transcription,
site-specific recombination, and...; Region: HU_IHF;
cd00591"
/db_xref="CDD:29683"
misc_feature complement(order(119374..119376,119395..119397,
119401..119403,119413..119418,119482..119484,
119497..119502,119509..119523,119533..119535,
119542..119547,119554..119556,119596..119598,
119608..119610,119617..119619,119626..119631))
/locus_tag="MA5_00475"
/note="IHF dimer interface [polypeptide binding]; other
site"
/db_xref="CDD:29683"
misc_feature complement(order(119389..119391,119398..119400,
119404..119406,119416..119418,119446..119457,
119464..119466,119470..119475,119479..119481,
119491..119493,119500..119505,119509..119511,
119515..119517,119557..119559,119623..119631))
/locus_tag="MA5_00475"
/note="IHF - DNA interface [nucleotide binding]; other
site"
/db_xref="CDD:29683"
gene 120820..121398
/locus_tag="MA5_00480"
/db_xref="GeneID:12006987"
CDS 120820..121398
/locus_tag="MA5_00480"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404374.1"
/db_xref="GI:383486694"
/db_xref="GeneID:12006987"
/translation="MFSSESYNNSFESSIKAKPFWSNTTSESTARTIEDISEYKELRH
FYPLSKKGVDSLNFRANREFSNNSMNQLLLKFYIKYNEKRFKNKFTFLSYMAKILKNE
KHQGPLVNHTRFRFSCNIGEIEKNLLEYEKYLNQIENSFDTSKDMQVRKKIAEKFSAE
VVYEMLTQVEFKTNHDNSVFIVLVPNRLNLSE"
misc_feature 122398..122834
/note="potential frameshift: common BLAST hit:
gi|67459873|ref|YP_247495.1| patatin-like phospholipase"
gene 123704..123910
/locus_tag="MA5_00495"
/db_xref="GeneID:12006988"
CDS 123704..123910
/locus_tag="MA5_00495"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404375.1"
/db_xref="GI:383486695"
/db_xref="GeneID:12006988"
/translation="MGKKQGMSTALVPKEGFQWQKVQDMINNRPILATSHKFAKQYSN
SDLSKKEWDQLDKNNLLECSKISV"
gene complement(124093..124335)
/locus_tag="MA5_00500"
/db_xref="GeneID:12006989"
CDS complement(124093..124335)
/locus_tag="MA5_00500"
/note="COG3328 Transposase and inactivated derivatives"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_005404376.1"
/db_xref="GI:383486696"
/db_xref="GeneID:12006989"
/translation="MGLWISENEGAKFWLGNFTEMKNRGMQDILIACSDDLDGMSEAI
DAVFPKTEHQLYILYIKLGIVYDMYHIRTGKSLLVI"
misc_feature complement(124156..>124332)
/locus_tag="MA5_00500"
/note="MULE transposase domain; Region: MULE; pfam10551"
/db_xref="CDD:220806"
gene complement(124474..124599)
/locus_tag="MA5_00505"
/db_xref="GeneID:12006990"
CDS complement(124474..124599)
/locus_tag="MA5_00505"
/note="COG3328 Transposase and inactivated derivatives"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_005404377.1"
/db_xref="GI:383486697"
/db_xref="GeneID:12006990"
/translation="MCEKGISLSDIKLQIQELYGAEVSESLISQITDDIIEDVKL"
misc_feature complement(<124480..>124599)
/locus_tag="MA5_00505"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG3328"
/db_xref="CDD:225865"
gene complement(124651..124923)
/locus_tag="MA5_00510"
/db_xref="GeneID:12006991"
CDS complement(124651..124923)
/locus_tag="MA5_00510"
/note="COG3328 Transposase and inactivated derivatives"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_005404378.1"
/db_xref="GI:383486698"
/db_xref="GeneID:12006991"
/translation="MRQKQNTTMNQAIDLLINNDTVVSTLFKEDGLLKELTKRLVEKT
LQSEINNHLGYSKYNQSDAQNSRNGYNTKNLITKNGAVEIEVLRDR"
misc_feature complement(<124654..124854)
/locus_tag="MA5_00510"
/note="Transposase, Mutator family; Region:
Transposase_mut; pfam00872"
/db_xref="CDD:109910"
gene complement(125368..125742)
/locus_tag="MA5_00515"
/db_xref="GeneID:12006992"
CDS complement(125368..125742)
/locus_tag="MA5_00515"
/note="COG1961 Site-specific recombinases, DNA invertase
Pin homologs"
/codon_start=1
/transl_table=11
/product="Tn5501/Tn5503/Tn4662 resolvase"
/protein_id="YP_005404379.1"
/db_xref="GI:383486699"
/db_xref="GeneID:12006992"
/translation="MLVGYIRVSSENDRQVFDLQYDALIKESVDPRHIFQDQVSGAKD
NRKGLQEALSYLQDGDCLIVWKLDRLGRSLSHLIILIDGFKQKNIGFKSITEQMDTTT
SHGEFLFSVFVALAQKNALWQC"
misc_feature complement(<125392..125742)
/locus_tag="MA5_00515"
/note="Site-specific recombinases, DNA invertase Pin
homologs [DNA replication, recombination, and repair];
Region: PinR; COG1961"
/db_xref="CDD:224872"
misc_feature complement(125392..125739)
/locus_tag="MA5_00515"
/note="Serine Recombinase (SR) family, Resolvase and
Invertase subfamily, catalytic domain; members contain a
C-terminal DNA binding domain. Serine recombinases
catalyze site-specific recombination of DNA molecules by a
concerted, four-strand cleavage and...; Region: SR_ResInv;
cd03768"
/db_xref="CDD:239737"
misc_feature complement(order(125527..125529,125536..125541,
125716..125718,125722..125724))
/locus_tag="MA5_00515"
/note="catalytic residues [active]"
/db_xref="CDD:239737"
misc_feature complement(125716..125718)
/locus_tag="MA5_00515"
/note="catalytic nucleophile [active]"
/db_xref="CDD:239737"
misc_feature complement(order(125398..125403,125407..125412,
125542..125544))
/locus_tag="MA5_00515"
/note="Presynaptic Site I dimer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature complement(order(125398..125403,125410..125415,
125422..125424,125506..125511,125524..125526))
/locus_tag="MA5_00515"
/note="Synaptic Antiparallel dimer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature complement(order(125398..125400,125407..125412,
125419..125424,125449..125457))
/locus_tag="MA5_00515"
/note="Synaptic Flat tetramer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature complement(order(125398..125400,125407..125409,
125455..125457))
/locus_tag="MA5_00515"
/note="Synaptic Site I dimer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature complement(126736..128171)
/note="potential frameshift: common BLAST hit:
gi|157827060|ref|YP_001496124.1| ankyrin repeat-containing
protein"
misc_feature complement(128481..129132)
/note="potential frameshift: common BLAST hit:
gi|67459879|ref|YP_247501.1| transposase"
misc_feature complement(128860..129412)
/note="potential frameshift: common BLAST hit:
gi|67459879|ref|YP_247501.1| transposase"
misc_feature 129980..131858
/note="potential frameshift: common BLAST hit:
gi|157827003|ref|YP_001496067.1| ankyrin repeat-containing
protein"
gene complement(131998..132099)
/locus_tag="MA5_00555"
/db_xref="GeneID:12006993"
CDS complement(131998..132099)
/locus_tag="MA5_00555"
/note="COG3505 Type IV secretory pathway, VirD4
components"
/codon_start=1
/transl_table=11
/product="TaxB conjugal transfer protein"
/protein_id="YP_005404380.1"
/db_xref="GI:383486700"
/db_xref="GeneID:12006993"
/translation="MLPQELKQMSFGEEIVLLNGKNPIKCEKALFMH"
misc_feature complement(132007..>132099)
/locus_tag="MA5_00555"
/note="Type IV secretory system Conjugative DNA transfer;
Region: T4SS-DNA_transf; pfam02534"
/db_xref="CDD:111435"
gene complement(132233..132418)
/locus_tag="MA5_00560"
/db_xref="GeneID:12006994"
CDS complement(132233..132418)
/locus_tag="MA5_00560"
/note="COG3505 Type IV secretory pathway, VirD4
components"
/codon_start=1
/transl_table=11
/product="type IV secretion system conjugal transfer
coupling protein TaxB"
/protein_id="YP_005404381.1"
/db_xref="GI:383486701"
/db_xref="GeneID:12006994"
/translation="MILDEFQAIGNIPYVKETVGYIAGYQLQLLTIFQNVSQLNEIYG
MQGRKTLLSNHSASSCS"
misc_feature complement(<132251..132418)
/locus_tag="MA5_00560"
/note="TraM recognition site of TraD and TraG; Region:
TraG-D_C; cl17375"
/db_xref="CDD:247929"
gene 133099..133233
/locus_tag="MA5_00565"
/db_xref="GeneID:12006995"
CDS 133099..133233
/locus_tag="MA5_00565"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404382.1"
/db_xref="GI:383486702"
/db_xref="GeneID:12006995"
/translation="MEYNNNEALESAKKWECIKYDTTCTDFGQLYNKDIVLKNSIIEI
"
gene complement(133257..134129)
/locus_tag="MA5_00570"
/db_xref="GeneID:12006996"
CDS complement(133257..134129)
/locus_tag="MA5_00570"
/note="COG1560 Lauroyl/myristoyl acyltransferase"
/codon_start=1
/transl_table=11
/product="lipid A biosynthesis lauroyl acyltransferase"
/protein_id="YP_005404383.1"
/db_xref="GI:383486703"
/db_xref="GeneID:12006996"
/translation="MKKFLKKLRYLIEYFIVIIFLKVIGIFGIDKASDICSFIARKVG
ILFAVNKIAKRNIKAVFGDMYDVEKIIDQTWDNFGRFIGEFIYVDKMDESELESRIEI
IGKENIKKLEDQPFLLFSGHFANWDISLKVLKKYYPKVAVIYRKANNPYVNKLVNESR
AGDKLRLIPKGSEGIRSLVRAIKEGESIVMLVDQKMNDGIEVPFLGRPSMTASSIAKI
ALQYKYPIIPCQIIRTKGSYFKVIVHPQLKFEQTGDNKVDCYNIMFNINQILGEWVKQ
NPAQWFWFHNRWKK"
misc_feature complement(133260..134129)
/locus_tag="MA5_00570"
/note="Bacterial lipid A biosynthesis acyltransferase;
Region: Lip_A_acyltrans; pfam03279"
/db_xref="CDD:112109"
misc_feature complement(133263..133841)
/locus_tag="MA5_00570"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: LABLAT-like; Region:
LPLAT_LABLAT-like; cd07984"
/db_xref="CDD:153246"
misc_feature complement(order(133542..133550,133689..133700,
133749..133751,133755..133757,133764..133766))
/locus_tag="MA5_00570"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153246"
gene complement(134092..135069)
/gene="lpxK"
/locus_tag="MA5_00575"
/db_xref="GeneID:12006997"
CDS complement(134092..135069)
/gene="lpxK"
/locus_tag="MA5_00575"
/EC_number="2.7.1.130"
/note="COG1663 Tetraacyldisaccharide-1-P 4'-kinase"
/codon_start=1
/transl_table=11
/product="tetraacyldisaccharide 4'-kinase"
/protein_id="YP_005404384.1"
/db_xref="GI:383486704"
/db_xref="GeneID:12006997"
/translation="MIKLLYPQFWQERNIIAYLLLPISLIYQFLSYLRASLAYPVILP
AQVICVGNCSVGGTGKTQIVIYLAKLLKAKNVPFVIITKAYGSYIKSTTIIQKGHTAL
EVGDEGIMLARYGTVIAAKYVKDILPLINELKPDVIIVDDFLQNPYLHKDFTIVSVDS
QRLFGNRFLIPAGPLRQNPKQVLDAADLIFLVSSNQDQIPNELTPYIDKLINAQIVPS
NNIDKNKNYFAFSGIGNPQRFFLTLENYRLNIVGYKIFPDHYNYLQADLENLYSLAKE
HNAILITTRKDYVKFNYLNDEIICLDVELSINNPDLLNEKIFKKAKILN"
misc_feature complement(134113..135066)
/gene="lpxK"
/locus_tag="MA5_00575"
/note="tetraacyldisaccharide 4'-kinase; Reviewed; Region:
lpxK; PRK00652"
/db_xref="CDD:179082"
misc_feature complement(134101..135024)
/gene="lpxK"
/locus_tag="MA5_00575"
/note="tetraacyldisaccharide 4'-kinase; Region: lpxK;
TIGR00682"
/db_xref="CDD:161995"
gene complement(137034..139103)
/gene="ligA"
/locus_tag="MA5_00580"
/db_xref="GeneID:12006998"
CDS complement(137034..139103)
/gene="ligA"
/locus_tag="MA5_00580"
/EC_number="6.5.1.2"
/note="COG0272 NAD-dependent DNA ligase (contains BRCT
domain type II)"
/codon_start=1
/transl_table=11
/product="NAD-dependent DNA ligase LigA"
/protein_id="YP_005404385.1"
/db_xref="GI:383486705"
/db_xref="GeneID:12006998"
/translation="MQNIDLISEQEAKKLLKELADKIAMYNHAYYIEDNPLVSDSEYD
QLFNINLKLENTFPHLVLSNSPSKKVGANITNKFAKVIHQAPMLSLSNAFDEDDLRDF
LERIKNFLRINEFTPIFCEPKIDGVSFSAIYKNGLFITGATRGDGYVGEDITMNIKTI
KNFPHKIDNAPEFLEVRGEIYIEKQDFLNLNKEQEAQNRGKFANPRNAAAGSIRQLDV
AITAQRPLKYFIYSGGVTEQNLASTQEQLLTKLKALSFSVNEISKLASSEEEIFAFYE
YLKTNRHNLPYEIDGVVYKLNNFAMQNRMGFIARSPRFAIAHKFPAIIGQTKLLSITV
QVGRTGMLTPVAELDPIEIGGVVVSRATLHNFQDIARKDVRIKDYVFLQRAGDVIPQI
TGVDISKRSNDTVKFDTPVFCPSCNSKLRYVSEDIIIRCDNGLNCPAQNYERICHFVS
KNAMDIEGLGRKQVAFLIDKRLISNPLDIFFLKEKNETNLIRLENMDGWGKKSVANLF
KNIEKSQKISLQRFIYALGIRHIGEQNAKLLAREFGSYNNFIAQMELLSKNDSDIYQK
LNDLEGIGDKILVDIVDFFYVKENTQLIKRLGSVLNIEDYQETREQNILTGKIVVFTG
SLSTISRVEAKEIAEKLGAKVTASVSLNTDLVIAGVNGGSKLKKAKELNIKIIDEVEW
LAFIKNA"
misc_feature complement(137037..139028)
/gene="ligA"
/locus_tag="MA5_00580"
/note="NAD-dependent DNA ligase LigA; Validated; Region:
ligA; PRK07956"
/db_xref="CDD:236137"
misc_feature complement(138138..139028)
/gene="ligA"
/locus_tag="MA5_00580"
/note="NAD+ dependent DNA ligase adenylation domain. DNA
ligases catalyze the crucial step of joining the breaks in
duplex DNA during DNA replication, repair and
recombination, utilizing either ATP or NAD(+) as a
cofactor, but using the same basic reaction...; Region:
LIGANc; cd00114"
/db_xref="CDD:238062"
misc_feature complement(order(138219..138221,138225..138227,
138411..138413,138567..138569,138672..138674,
138735..138737,138741..138743,138834..138836))
/gene="ligA"
/locus_tag="MA5_00580"
/note="nucleotide binding pocket [chemical binding]; other
site"
/db_xref="CDD:238062"
misc_feature complement(order(138726..138731,138735..138737))
/gene="ligA"
/locus_tag="MA5_00580"
/note="K-X-D-G motif; other site"
/db_xref="CDD:238062"
misc_feature complement(138735..138737)
/gene="ligA"
/locus_tag="MA5_00580"
/note="catalytic site [active]"
/db_xref="CDD:238062"
misc_feature complement(137886..138128)
/gene="ligA"
/locus_tag="MA5_00580"
/note="NAD-dependent DNA ligase OB-fold domain; Region:
DNA_ligase_OB; pfam03120"
/db_xref="CDD:145978"
misc_feature complement(137787..137870)
/gene="ligA"
/locus_tag="MA5_00580"
/note="NAD-dependent DNA ligase C4 zinc finger domain;
Region: DNA_ligase_ZBD; pfam03119"
/db_xref="CDD:202542"
misc_feature complement(137055..137255)
/gene="ligA"
/locus_tag="MA5_00580"
/note="Breast Cancer Suppressor Protein (BRCA1),
carboxy-terminal domain. The BRCT domain is found within
many DNA damage repair and cell cycle checkpoint proteins.
The unique diversity of this domain superfamily allows
BRCT modules to interact forming homo...; Region: BRCT;
cd00027"
/db_xref="CDD:237994"
misc_feature complement(order(137172..137174,137178..137180,
137187..137189,137196..137198,137208..137210))
/gene="ligA"
/locus_tag="MA5_00580"
/note="Dimer interface [polypeptide binding]; other site"
/db_xref="CDD:237994"
misc_feature complement(137058..137060)
/gene="ligA"
/locus_tag="MA5_00580"
/note="BRCT sequence motif; other site"
/db_xref="CDD:237994"
gene complement(139241..140326)
/gene="tgt"
/locus_tag="MA5_00585"
/db_xref="GeneID:12006999"
CDS complement(139241..140326)
/gene="tgt"
/locus_tag="MA5_00585"
/EC_number="2.4.2.29"
/note="COG0343 Queuine/archaeosine
tRNA-ribosyltransferase"
/codon_start=1
/transl_table=11
/product="queuine tRNA-ribosyltransferase"
/protein_id="YP_005404386.1"
/db_xref="GI:383486706"
/db_xref="GeneID:12006999"
/translation="MSKFSFTIHSHYKKARSGVITTAHGEIRTPAFMPVGTRGAVKAM
LTEAVVETGADILLGNTYHLMLQPSAERIAYLGGLHKFMNWDKPILTDSGGFQVMSLS
KLCKITEEGVSFRSHINGNKYMLTPEYSTEIQYLLGSTITMALDECTPYPSTFEKAKT
SMHLTTRWANRSRDAFVKREGYAQFGIIQGSVYKELREQSVKDLVKCDFEGYAIGGLA
VGEGQELMFRVLDYVPDFLPQNKPRYLMGVGKPSDIIGAVSRGIDMFDCVIPTRSGRN
GQAFTKYGTVNIRNSKYADDKEPLEHDCKCPACTNYTKAYLHHLVRIREILGPMLMTW
HNLTYFQNLMSRIRTYIKLGKDFDFVH"
misc_feature complement(139244..140323)
/gene="tgt"
/locus_tag="MA5_00585"
/note="queuine tRNA-ribosyltransferase; Provisional;
Region: tgt; PRK00112"
/db_xref="CDD:178873"
misc_feature complement(139247..140311)
/gene="tgt"
/locus_tag="MA5_00585"
/note="Queuine/archaeosine tRNA-ribosyltransferase
[Translation, ribosomal structure and biogenesis]; Region:
Tgt; COG0343"
/db_xref="CDD:30691"
gene complement(142291..142575)
/locus_tag="MA5_00590"
/db_xref="GeneID:12007000"
CDS complement(142291..142575)
/locus_tag="MA5_00590"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404387.1"
/db_xref="GI:383486707"
/db_xref="GeneID:12007000"
/translation="MKESNSNSVKEDVEGIKKDIESLVSRLRNLKGKTGDILDEQLGN
LSSVMEHYKDKGIEKGKANLADLCESTRNNPLRNLAYAFGAGVLLAILMK"
misc_feature complement(142297..142530)
/locus_tag="MA5_00590"
/note="Bacterial protein of unknown function (DUF883);
Region: DUF883; cl01888"
/db_xref="CDD:242764"
gene complement(142947..143396)
/locus_tag="MA5_00595"
/db_xref="GeneID:12007001"
CDS complement(142947..143396)
/locus_tag="MA5_00595"
/note="COG1463 ABC-type transport system involved in
resistance to organic solvents, periplasmic component"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate binding protein"
/protein_id="YP_005404388.1"
/db_xref="GI:383486708"
/db_xref="GeneID:12007001"
/translation="MQQNIVETIIGFLVLIIGLLFLIFAYKTGTSIITSRGYQVIANF
QNAEGIAVGSDVMISGIKVGSVTQITLDPDRFYASVYLNINDDVKIPKDSKAQVVTSG
LLGGKYIAIIPGNGDENLSANEEIRYTQSAINIESLINKIVYSFGNK"
misc_feature complement(<142950..143294)
/locus_tag="MA5_00595"
/note="ABC-type transport system involved in resistance to
organic solvents, periplasmic component [Secondary
metabolites biosynthesis, transport, and catabolism];
Region: Ttg2C; COG1463"
/db_xref="CDD:224380"
misc_feature complement(143055..143291)
/locus_tag="MA5_00595"
/note="mce related protein; Region: MCE; pfam02470"
/db_xref="CDD:217055"
gene complement(143422..143724)
/locus_tag="MA5_00600"
/db_xref="GeneID:12007002"
CDS complement(143422..143724)
/locus_tag="MA5_00600"
/note="COG3761 NADH:ubiquinone oxidoreductase 17.2 kD
subunit"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404389.1"
/db_xref="GI:383486709"
/db_xref="GeneID:12007002"
/translation="MSWIDKFFITFFYTKVGEDEFLNQYYESRNNIDYLGRSRRCVIY
KNINESTKIPPSWYSWLHHLVNEIPKNVQLFPWQQNNKITKKLPKTSNLKYNRWQP"
misc_feature complement(143425..143724)
/locus_tag="MA5_00600"
/note="hypothetical protein; Provisional; Region:
PRK06630"
/db_xref="CDD:168631"
gene complement(143712..144170)
/gene="rnhA"
/locus_tag="MA5_00605"
/db_xref="GeneID:12007003"
CDS complement(143712..144170)
/gene="rnhA"
/locus_tag="MA5_00605"
/EC_number="3.1.26.4"
/note="COG0328 Ribonuclease HI"
/codon_start=1
/transl_table=11
/product="ribonuclease H"
/protein_id="YP_005404390.1"
/db_xref="GI:383486710"
/db_xref="GeneID:12007003"
/translation="MDSKVVIYTDGACSGNPGPGGWGALLHFNDTSKKIFGYELVTTN
NRMEMTAALEALRILKKSSVVEIYTDSKYLQHGITVWIHNWIKNNWCKSNNAPVKNAD
LWQKLYSELSKHTIMWKWVKGHASNSGNIAADKLAVQGRETAMEILKCLG"
misc_feature complement(143745..144161)
/gene="rnhA"
/locus_tag="MA5_00605"
/note="RNase HI family found mainly in prokaryotes;
Region: RNase_HI_prokaryote_like; cd09278"
/db_xref="CDD:187702"
misc_feature complement(order(143757..143759,143811..143813,
143961..143963,144027..144029,144036..144044,
144132..144143))
/gene="rnhA"
/locus_tag="MA5_00605"
/note="RNA/DNA hybrid binding site [nucleotide binding];
other site"
/db_xref="CDD:187702"
misc_feature complement(order(143769..143771,143961..143963,
144027..144029,144141..144143))
/gene="rnhA"
/locus_tag="MA5_00605"
/note="active site"
/db_xref="CDD:187702"
gene complement(144181..144660)
/locus_tag="MA5_00610"
/db_xref="GeneID:12007004"
CDS complement(144181..144660)
/locus_tag="MA5_00610"
/note="COG3814 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404391.1"
/db_xref="GI:383486711"
/db_xref="GeneID:12007004"
/translation="MNIEYKKFVNEYMLEFVKKILTKIQHENLYWDQLIYISYRTDNP
AVILPSKVKQAYPKQITIVLQYQFENLTVKDNGFSLTVSFDGVKEIIYIPFDSLISFV
DSNNNYSLTFNQSLNIPEHQQYEKEISNNKSYKTSLSLNPNVIMLDKFRNSSKPKPS"
misc_feature complement(144202..144660)
/locus_tag="MA5_00610"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3814"
/db_xref="CDD:226335"
gene 145450..146262
/locus_tag="MA5_00615"
/db_xref="GeneID:12007005"
CDS 145450..146262
/locus_tag="MA5_00615"
/note="COG3494 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404392.1"
/db_xref="GI:383486712"
/db_xref="GeneID:12007005"
/translation="MLPNLGMIAGRGSLPHLIACNYIKQGGKCYIAAIKDETNIEQIK
EFEYKIFKIGMVGEAIRYFQDHNVENIIFIGGINRPNFKNLAVDKIGRLLLFKIVEQK
IRGDDSLLKIVANFFESYGFKVISSNQIYQNQQCNSNIITNTTITNSDKNDIELGIKV
LNHLSLFDIAQSVIVKNGYILGIEAAEGTDNLIVRCADLRKKSHGGILVKIPKLGQDN
RLDMPTIGPNTIKNLAKYNYQGLAIQKNNVIIVEEELTIKLANKHKIFITKC"
misc_feature 145450..146259
/locus_tag="MA5_00615"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3494"
/db_xref="CDD:226025"
gene 146256..146831
/gene="coaE"
/locus_tag="MA5_00620"
/db_xref="GeneID:12007006"
CDS 146256..146831
/gene="coaE"
/locus_tag="MA5_00620"
/EC_number="2.7.1.24"
/note="COG0237 Dephospho-CoA kinase"
/codon_start=1
/transl_table=11
/product="dephospho-CoA kinase"
/protein_id="YP_005404393.1"
/db_xref="GI:383486713"
/db_xref="GeneID:12007006"
/translation="MLAIGITGSYASGKTFILNYLSAKGYKTFCADRCIKELYKDIVL
QTQILKILPELEYFNIRKISNLIYNNDIAREKLQNFIYPLLIDKLILFKKENTNYKLA
FSEIPLLYEAKFEQYFDFVVTIYCSEEIRMQRAITRAEFDINIYNKIKEIQLSQESKI
AKADFSINSGVDMLDLEKQITKLIKDLECRV"
misc_feature 146256..146828
/gene="coaE"
/locus_tag="MA5_00620"
/note="Dephospho-CoA kinase [Coenzyme metabolism]; Region:
CoaE; COG0237"
/db_xref="CDD:223315"
misc_feature 146265..146780
/gene="coaE"
/locus_tag="MA5_00620"
/note="Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24)
catalyzes the phosphorylation of dephosphocoenzyme A
(dCoA) to yield CoA, which is the final step in CoA
biosynthesis; Region: DPCK; cd02022"
/db_xref="CDD:238980"
misc_feature order(146274..146276,146349..146351,146499..146501,
146574..146579,146712..146714)
/gene="coaE"
/locus_tag="MA5_00620"
/note="CoA-binding site [chemical binding]; other site"
/db_xref="CDD:238980"
misc_feature order(146277..146285,146292..146297,146655..146657,
146760..146762)
/gene="coaE"
/locus_tag="MA5_00620"
/note="ATP-binding [chemical binding]; other site"
/db_xref="CDD:238980"
gene 146819..147508
/locus_tag="MA5_00625"
/db_xref="GeneID:12007007"
CDS 146819..147508
/locus_tag="MA5_00625"
/note="COG0847 DNA polymerase III, epsilon subunit and
related 3'-5' exonucleases"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit epsilon"
/protein_id="YP_005404394.1"
/db_xref="GI:383486714"
/db_xref="GeneID:12007007"
/translation="MSSLREIILDTETTGLDPQQGHRIVEIGAIEMVNKVLTGKHFHF
YINPERDMPFEAYKIHGISGEFLKDKPLFKTIANDFLKFIADSTLIIHNAPFDIKFLN
HELSLLKRTEIKFLELTNTIDTLVMARNMFPGARYSLDALCKRFKVDNSGRQLHGALK
DAALLAEVYVALTGGRQSTFKMINKPDEINNLAVKCVDVQQIKRGIVVKPTKEELQKH
KEFIDKILIQA"
misc_feature 146831..147505
/locus_tag="MA5_00625"
/note="DNA polymerase III, epsilon subunit,
Proteobacterial; Region: dnaQ_proteo; TIGR01406"
/db_xref="CDD:130473"
misc_feature 146834..147337
/locus_tag="MA5_00625"
/note="DEDDh 3'-5' exonuclease domain of the epsilon
subunit of Escherichia coli DNA polymerase III and similar
proteins; Region: DNA_pol_III_epsilon_Ecoli_like; cd06131"
/db_xref="CDD:99835"
misc_feature order(146846..146857,146861..146866,146981..146986,
146993..146998,147092..147097,147101..147109,
147230..147235,147275..147277,147284..147286,
147299..147301)
/locus_tag="MA5_00625"
/note="active site"
/db_xref="CDD:99835"
misc_feature order(146846..146857,146861..146866,146981..146986,
146993..146998,147092..147097,147101..147106,
147230..147235,147275..147277,147284..147286,
147299..147301)
/locus_tag="MA5_00625"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:99835"
misc_feature order(146846..146848,146852..146854,147107..147109,
147284..147286,147299..147301)
/locus_tag="MA5_00625"
/note="catalytic site [active]"
/db_xref="CDD:99835"
gene 147634..148368
/locus_tag="MA5_00630"
/db_xref="GeneID:12007008"
CDS 147634..148368
/locus_tag="MA5_00630"
/note="COG3346 Uncharacterized conserved protein"
/codon_start=1
/transl_table=11
/product="surfeit locus protein 1 (surf1)"
/protein_id="YP_005404395.1"
/db_xref="GI:383486715"
/db_xref="GeneID:12007008"
/translation="MKINFLILTTFIILTSLGFWQLSRLKEKKLFLDSIQSHIISPGI
NLEKVQENLLYHKVKITGQFLPNKDIYLYGIRLMAMEKDGYYLVTPFKTIADQVILVV
RGWFSNRNKNIIMKATNNQIHEIIGVIMPSEKTLSYLPANDIKNNVWLTLDLKEASKA
LKLNLENFYIIAEGKDISNLDILLPLSLNHLALIKNDHLEYAITWFGLAIFLIVIYVI
YRHSSNIPVPVNKQLKSLEQKNNQKN"
misc_feature 147679..148278
/locus_tag="MA5_00630"
/note="SURF1 superfamily. Surf1/Shy1 has been implicated
in the posttranslational steps of the biogenesis of the
mitochondrially-encoded Cox1 subunit of cytochrome c
oxidase (complex IV). Cytochrome c oxidase (complex IV),
the terminal electron-transferring...; Region: SURF1;
cd06662"
/db_xref="CDD:119401"
gene 148417..150885
/locus_tag="MA5_00635"
/db_xref="GeneID:12007009"
CDS 148417..150885
/locus_tag="MA5_00635"
/note="COG1074 ATP-dependent exoDNAse (exonuclease V) beta
subunit (contains helicase and exonuclease domains)"
/codon_start=1
/transl_table=11
/product="ATP-dependent nuclease subunit A (addA)"
/protein_id="YP_005404396.1"
/db_xref="GI:383486716"
/db_xref="GeneID:12007009"
/translation="MSNLQQQASNPNTSVWVSASAGTGKTKILIDRFLRLLITGTEPT
NILCLTFTNAAAIEMQARINSKLKYLALCDAEKLENELFLMSGNKPLPQEIANTKTLY
YKLLNSHEPLNIYTIHAFCQKILKTFPLEAGITPEFKILEETKLQDIFLKIKNEIYLS
DEHNEVIQILLNRFHEITLQDIFTEIIEQKIKFKKLFINKQIPEQISNKRLALEQLNN
IYDKVASLFTAYDLAIAPKTLFFTKDGGKRKRLLSKELTKKYPQLLTELEKITAKIHH
LDELRRIEELKYHTNLLTKLAYIFLKKYDSYKEENNLLDYDDLIYYTEKLLNNKTTHE
WLFHKFENEINHILIDEAQDTSPTQWNIITTLITKLNVAEKPSNSTFIVGDDKQSIFR
FQGANLHNFNLVNDQLKINLTSNNKKFKNITLEYSYRSCPEILQFTHNVLNNIKSNYP
NLFLADNPLISSLRIHQGSVTVWPLLTNQKQKEFFWTLPEDDKNAKSAADLLIDKIVN
FIKEKIKSKGILTSTASRISEKDFMILVRKRDKFSHNLIKELSKAKLKVEISDRINLK
ENLPILDLIAAAKFVLLPDDDLNLACLLKSPIIGISEQKLYTLLVKKNDHTLWEVLSS
HKDIYHKLDSIIEIYKIATAENFFDLLVNRLNLRAIYGKNTDDMINDLLTLSKDYANS
IDNSLQGFIAWFENNDIYIKRDMEHSDKIRVMTVHGSKGLEAPFVILCDSTTLPIRSN
KFIWDDNGQMFFSLNSEDTPAFLQELKESEKLKDLQEYMRLLYVAMTRAQDHLIICGF
SNKDTIPENCWYKIAKQTFDKLLN"
misc_feature 148417..>149136
/locus_tag="MA5_00635"
/note="UvrD/REP helicase N-terminal domain; Region:
UvrD-helicase; pfam00580"
/db_xref="CDD:216004"
misc_feature 148465..>148608
/locus_tag="MA5_00635"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:222005"
misc_feature <149125..149643
/locus_tag="MA5_00635"
/note="UvrD/REP helicase N-terminal domain; Region:
UvrD-helicase; pfam00580"
/db_xref="CDD:216004"
misc_feature 149680..150816
/locus_tag="MA5_00635"
/note="UvrD-like helicase C-terminal domain; Region:
UvrD_C; pfam13361"
/db_xref="CDD:222073"
misc_feature 150364..150804
/locus_tag="MA5_00635"
/note="Family description; Region: UvrD_C_2; pfam13538"
/db_xref="CDD:222209"
gene 151933..152877
/locus_tag="MA5_00640"
/db_xref="GeneID:12007010"
CDS 151933..152877
/locus_tag="MA5_00640"
/note="COG0331 (acyl-carrier-protein)
S-malonyltransferase"
/codon_start=1
/transl_table=11
/product="acyl-carrier-protein S-malonyltransferase"
/protein_id="YP_005404397.1"
/db_xref="GI:383486717"
/db_xref="GeneID:12007010"
/translation="MKTAFIFPGQGSQLIGMGKDFYDNLKPAKETFQIIDEVLNRKLT
DIIFNGPSEALTLTTNAQPALMAVSMAIINIIKAETGKNLDSLCDYAAGHSLGEYSAL
CSAESINLETTAKLLHIRSTSMQEACPEGVGAMAACINIPLQTLVELLEDIKKINLCQ
IANDNIEGQIIISGKVEAINHAISIIKDLGYKAIRLKVSAPFHCSLMKPAEEKMSIAL
DKAVINKPIIPIIQNYTAKPTINPLEIKQNLILQICGRVRWRETLKLFNHLHVTHIVE
IGAGNVLTNMLRKINYPYKLSNIRNLAELKNFLDNINK"
misc_feature 151933..152865
/locus_tag="MA5_00640"
/note="(acyl-carrier-protein) S-malonyltransferase [Lipid
metabolism]; Region: FabD; COG0331"
/db_xref="CDD:223408"
misc_feature 151933..152805
/locus_tag="MA5_00640"
/note="malonyl CoA-acyl carrier protein transacylase;
Region: fabD; TIGR00128"
/db_xref="CDD:232839"
gene 153776..153867
/locus_tag="MA5_t04317"
/db_xref="GeneID:12007011"
tRNA 153776..153867
/locus_tag="MA5_t04317"
/product="tRNA-Ser"
/db_xref="GeneID:12007011"
gene complement(154564..155742)
/locus_tag="MA5_00645"
/db_xref="GeneID:12007012"
CDS complement(154564..155742)
/locus_tag="MA5_00645"
/EC_number="2.3.1.9"
/note="COG0183 Acetyl-CoA acetyltransferase"
/codon_start=1
/transl_table=11
/product="acetyl-CoA acetyltransferase"
/protein_id="YP_005404398.1"
/db_xref="GI:383486718"
/db_xref="GeneID:12007012"
/translation="MTKQVYITHAKRTAFGSFMGSLSTIPAPMLAAYLIKDILQNSKI
EPALVNEVILGQVITGGSGQNPARQALIYADIPQEVPGYTINKVCGSGLKSIALAANS
IITCDNEIVIAGGQENMSLGMHGSYIRAGSKFGDIKMVDLMQYDGLIDVFSGVFMGIT
AENIAKQFNISRQEQDAFALSSHKKAAKAQLSGILQDEILPIEVTVKKNTSLFDHDET
VRPNTSIEILSKLRPAFDKNGVVTAGNSSSINDGAACVLLVSEKALKKHNLTPLARIV
SWASAGVDPRIMGTAPVPASKKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDI
EKVNINGGAIAIGHPIGASGGRLLITLIHNLRRAKAKKGLVTLCIGGGIGISMCVEAV
"
misc_feature complement(154567..155742)
/locus_tag="MA5_00645"
/note="acetyl-CoA acetyltransferase; Provisional; Region:
PRK06633"
/db_xref="CDD:168632"
misc_feature complement(154570..155727)
/locus_tag="MA5_00645"
/note="Thiolase are ubiquitous enzymes that catalyze the
reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and...; Region: thiolase;
cd00751"
/db_xref="CDD:29411"
misc_feature complement(order(154597..154602,154837..154839,
154897..154899,154903..154905,154909..154911,
155383..155385,155428..155430,155437..155442,
155461..155463,155485..155496,155527..155529,
155539..155541,155548..155550,155590..155592,
155671..155673))
/locus_tag="MA5_00645"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29411"
misc_feature complement(order(154609..154611,154699..154701,
155476..155478))
/locus_tag="MA5_00645"
/note="active site"
/db_xref="CDD:29411"
gene complement(155739..156758)
/locus_tag="MA5_00650"
/db_xref="GeneID:12007013"
CDS complement(155739..156758)
/locus_tag="MA5_00650"
/note="COG3243 Poly(3-hydroxyalkanoate) synthetase"
/codon_start=1
/transl_table=11
/product="poly-beta-hydroxybutyrate polymerase"
/protein_id="YP_005404399.1"
/db_xref="GI:383486719"
/db_xref="GeneID:12007013"
/translation="MLDNNKLQEYFDLYNNYTKTNNLGNKYLKSGEIVIQAEHYRVLY
YSVSSYGLLTKSSNGQYKKLDVQYNTNTFLIIPSIFNSPEIFFLARDRSFIDNLRRYG
EVYLIDWLQIEESQYCLDDYVNEIIEVIDILKIKDINLIGHCIGGNLAIAANVLMPQF
IKTLTLLTCPWDFSHFFYIRMLYSYLKLDSSIVNLSIIPKIHIQILFFLLSPDCFNTK
LKKFFSITSDKEQELAFRIEHWLMSGHNISKGVYNQIIQNILYENMFINLKWKINNFI
IDPSLIDCSVYIVSAENDQIVPKSSILTLQKLLQNSKLIEVKGGHISYLINDKLDKLL
KEYTL"
misc_feature complement(155754..156539)
/locus_tag="MA5_00650"
/note="Predicted hydrolases or acyltransferases
(alpha/beta hydrolase superfamily) [General function
prediction only]; Region: MhpC; COG0596"
/db_xref="CDD:223669"
misc_feature complement(155772..>155930)
/locus_tag="MA5_00650"
/note="Uncharacterized conserved protein (DUF2048);
Region: DUF2048; pfam09752"
/db_xref="CDD:150427"
gene 157067..158569
/locus_tag="MA5_00655"
/db_xref="GeneID:12007014"
CDS 157067..158569
/locus_tag="MA5_00655"
/note="COG3202 ATP/ADP translocase"
/codon_start=1
/transl_table=11
/product="ADP,ATP carrier protein"
/protein_id="YP_005404400.1"
/db_xref="GI:383486720"
/db_xref="GeneID:12007014"
/translation="MLSTSPSRSFKNKFRAAFWPVHNYELGKFIPISALMFCILFNQN
ILRILKDSILISEISAEIAGFAKVYCVTPVAALFVIIYAKMINHLTFEKIFYYLSAFF
ISCFILFAFVIYPNIHIFHVHPDTLSDWMNKYPHFKWYISLVGNWGYIVYYSLAELWP
NIFYVLLFWQFTNELTTTEEAKRFYTLFSLFGNSSLILVGFLMMNLSSEDTIIKKFIS
ISDSKITLVQVSTTIIAIVAIICCLLVRFISKYIFTNPLFYHKTKSSRSTAQRMGLIK
SFKYIVKSKYLWLLLICSAAFGFAINLVEAVWKAKIKELYPTVNTYAEFNSLYILWTG
VAIIVMTIIGNNVMRMHNWFVAAVISPVIIMVTGVLFFGLIVFDQQILSLFDGAILMS
PLALAVSIGGIQNILAKGTKYSIWDTSREMLYIPLDDELKTKGKAAVDVISAKVGKSS
SGLVQSIIFTLVPNATFTSISPILMVVFTFVCFAWIYAVRKIYFEYQKIA"
misc_feature 157076..158554
/locus_tag="MA5_00655"
/note="TLC ATP/ADP transporter; Region: TLC; pfam03219"
/db_xref="CDD:217431"
gene complement(159349..160260)
/locus_tag="MA5_00660"
/db_xref="GeneID:12007015"
CDS complement(159349..160260)
/locus_tag="MA5_00660"
/note="COG1253 Hemolysins and related proteins containing
CBS domains"
/codon_start=1
/transl_table=11
/product="hemolysin C (tlyC)"
/protein_id="YP_005404401.1"
/db_xref="GI:383486721"
/db_xref="GeneID:12007015"
/translation="MLKSSKHEDSSSKKNQNNKLIFIVRQLFYLIKHFFSKTKTPDNF
FGIIKRLKINSQKMSLDEFNILANLLKLEDKTVEDIMVPRSDIIAIKLTTNLEELSES
IKIAVPHTRTLIYDGTLDNVVGFIHIKDLFKALATKQNSPLKRLIRKHIIAAPSMKLL
DLLAKMRRERTHIAIVVDEYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSANFKVINN
STIIANARIEVELLEEIIGEKLKNDDDEFDTIGGLVLTRVSSVPAIGTRIDISENIEI
EVTDATPRSLKQVKIRLKNGLNSDNLT"
misc_feature complement(159361..>160080)
/locus_tag="MA5_00660"
/note="Hemolysins and related proteins containing CBS
domains [General function prediction only]; Region: TlyC;
COG1253"
/db_xref="CDD:31445"
misc_feature complement(159676..160008)
/locus_tag="MA5_00660"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains associated
with the CorC_HlyC domain. CorC_HlyC is a transporter
associated domain. This small domain is found in Na+/H+
antiporters, in proteins involved in...; Region:
CBS_pair_CorC_HlyC_assoc; cd04590"
/db_xref="CDD:73090"
misc_feature complement(159379..>159534)
/locus_tag="MA5_00660"
/note="Transporter associated domain; Region: CorC_HlyC;
smart01091"
/db_xref="CDD:198159"
gene complement(160277..160780)
/locus_tag="MA5_00665"
/db_xref="GeneID:12007016"
CDS complement(160277..160780)
/locus_tag="MA5_00665"
/note="COG0319 Predicted metal-dependent hydrolase"
/codon_start=1
/transl_table=11
/product="metal-binding heat shock protein"
/protein_id="YP_005404402.1"
/db_xref="GI:383486722"
/db_xref="GeneID:12007016"
/translation="MINVEIIRNYNKWREHRKINKGLIKKITQNVLVRFDNFSKIKQF
ELSILLTNTAEILTLNQQFRSIEKATNVLSFPNNELNWHNLYSKLEFLYYSDYMHLGD
IAFCYEVIYNESCEQQKTFENHFIHMLIHSILHLIGFDHQNDTDANIMESLEIEILSY
FGIPSPY"
misc_feature complement(160280..160780)
/locus_tag="MA5_00665"
/note="metal-binding heat shock protein; Provisional;
Region: PRK00016"
/db_xref="CDD:234575"
gene complement(160883..161776)
/locus_tag="MA5_00670"
/db_xref="GeneID:12007017"
CDS complement(160883..161776)
/locus_tag="MA5_00670"
/EC_number="2.8.1.8"
/note="COG0320 Lipoate synthase"
/codon_start=1
/transl_table=11
/product="lipoyl synthase"
/protein_id="YP_005404403.1"
/db_xref="GI:383486723"
/db_xref="GeneID:12007017"
/translation="MTNLNKRPDWIKVKAPNSVEYYQTKDLIKNLRLNTVCEEAACPN
IGDCWSRKHATVMILGAVCTRACRFCNVKTGRPDLLDPHEPRRLAEAVQKLNLQHVVI
TSVDRDDLEDGGASHFAECINEIRRSSPNTTIEILTPDFLRKEGAVEIIANAKPDVFN
HNVETVPSLYKTIRPGARYYNSLSLLHNIKKLSPEIFTKSGMMVGLGEEINEVVQVMD
DLREANVDFLTIGQYLQPTKSHAEIRKYVTPEEFKYLERIAKTKGFLMVSATPLTRSS
YHADKDFQKLKGNYNIRLASM"
misc_feature complement(160916..161776)
/locus_tag="MA5_00670"
/note="lipoyl synthase; Provisional; Region: PRK05481"
/db_xref="CDD:235493"
misc_feature complement(160997..161608)
/locus_tag="MA5_00670"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature complement(order(161078..161083,161168..161170,
161291..161293,161360..161368,161453..161458,
161462..161464,161564..161572,161576..161578,
161582..161584,161588..161590))
/locus_tag="MA5_00670"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene complement(161769..163031)
/gene="glyA"
/locus_tag="MA5_00675"
/db_xref="GeneID:12007018"
CDS complement(161769..163031)
/gene="glyA"
/locus_tag="MA5_00675"
/EC_number="2.1.2.1"
/note="COG0112 Glycine/serine hydroxymethyltransferase"
/codon_start=1
/transl_table=11
/product="serine hydroxymethyltransferase"
/protein_id="YP_005404404.1"
/db_xref="GI:383486724"
/db_xref="GeneID:12007018"
/translation="MNILNNNLYEMDKEIYEIIKNEKIRQNNVIELIASENFVSSAVL
EAQGSILTNKYAEGYPSKRFYNGCDEVDKAEVLAIERIKKLFNCKYANVQPHSGSQAN
QTVYLALLQPCDTILGMSLDSGGHLTHGAAPNISGKWFNTVSYHVDQETYLIDYDEVE
RLAVLHNPKLLIAGFSAYPRKIDFAKFRKIADKVGAYLMADIAHIAGLVATGEHQSPI
PYAHVVTSTTHKTLRGPRGGLILSDDEEIGKKINSALFPGLQGGPLMHIIAAKAVAFL
ENLQPEYKNYIKQVISNAKALAISLQERGYDILTGGTDNHIVLVDLRKDGITGKCAAN
SLDRAGITCNKNAIPFDTTSPFITSGIRFGTPACTTKGFKEKDFVLIGHMVAEILDGL
KHNEDNSKTEQKVLSEVKKLMKLFPFYD"
misc_feature complement(161775..163025)
/gene="glyA"
/locus_tag="MA5_00675"
/note="serine hydroxymethyltransferase; Reviewed; Region:
glyA; PRK00011"
/db_xref="CDD:234571"
misc_feature complement(161796..162959)
/gene="glyA"
/locus_tag="MA5_00675"
/note="Serine-glycine hydroxymethyltransferase (SHMT).
This family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). SHMT
carries out interconversion of serine and glycine; it
catalyzes the transfer of hydroxymethyl...; Region: SHMT;
cd00378"
/db_xref="CDD:99733"
misc_feature complement(order(162186..162188,162240..162242,
162615..162620,162723..162725,162744..162746,
162789..162791,162813..162818,162870..162872,
162924..162926,162939..162941))
/gene="glyA"
/locus_tag="MA5_00675"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:99733"
misc_feature complement(order(161946..161948,162324..162326,
162342..162347,162420..162422,162429..162431,
162504..162506,162654..162656,162735..162740,
162837..162839,162867..162869,162927..162929))
/gene="glyA"
/locus_tag="MA5_00675"
/note="glycine-pyridoxal phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99733"
misc_feature complement(order(161946..161948,162342..162344,
162654..162656,162927..162929))
/gene="glyA"
/locus_tag="MA5_00675"
/note="active site"
/db_xref="CDD:99733"
misc_feature complement(order(161994..161996,162264..162266,
162651..162653,162657..162659,162669..162671,
162840..162842,162861..162863))
/gene="glyA"
/locus_tag="MA5_00675"
/note="folate binding site [chemical binding]; other site"
/db_xref="CDD:99733"
gene complement(163111..163758)
/locus_tag="MA5_00680"
/db_xref="GeneID:12007019"
CDS complement(163111..163758)
/locus_tag="MA5_00680"
/note="COG0400 Predicted esterase"
/codon_start=1
/transl_table=11
/product="serine esterase"
/protein_id="YP_005404405.1"
/db_xref="GI:383486725"
/db_xref="GeneID:12007019"
/translation="MNKYLEYPEVESKELPPQKLVVLLHGVGSDGHDLIGLVPYIKND
LPNCHFISPHGIEDYDMMPYGRQWFSLRDRSPHIIAKLIANNISKLEDIIREKQTELN
LTNKDTVIIGFSQGTIIGLYLTLIQQKPLFCTIGFSGALIPPMKVNNKLTPICLIHGE
LDQVINVSEMYNASNYLSKLNIEHSGHKLTSLAHSIDGRGLEIAINFINTCHNIV"
misc_feature complement(163126..163743)
/locus_tag="MA5_00680"
/note="putative hydrolase; Provisional; Region: PRK11460"
/db_xref="CDD:183144"
misc_feature complement(163123..163737)
/locus_tag="MA5_00680"
/note="Phospholipase/Carboxylesterase; Region:
Abhydrolase_2; pfam02230"
/db_xref="CDD:216940"
gene complement(163861..164184)
/locus_tag="MA5_00685"
/db_xref="GeneID:12007020"
CDS complement(163861..164184)
/locus_tag="MA5_00685"
/note="COG0278 Glutaredoxin-related protein"
/codon_start=1
/transl_table=11
/product="glutaredoxin-like protein GRLA (grxC2)"
/protein_id="YP_005404406.1"
/db_xref="GI:383486726"
/db_xref="GeneID:12007020"
/translation="MTKNKNLEFIQNAIKKNKVVLFMKGTKEMPACGFSGTVVAILNK
LGVEFSDINVLFDTALREDLKKFSDWPTFPQLYINGVLVGGCDIAKELYQNGELEKML
KDVVV"
misc_feature complement(163888..164157)
/locus_tag="MA5_00685"
/note="Glutaredoxin (GRX) family, PKC-interacting cousin
of TRX (PICOT)-like subfamily; composed of PICOT and
GRX-PICOT-like proteins. The non-PICOT members of this
family contain only the GRX-like domain, whereas PICOT
contains an N-terminal TRX-like domain...; Region:
GRX_PICOT_like; cd03028"
/db_xref="CDD:239326"
misc_feature complement(order(163966..163971,164083..164091,
164113..164115))
/locus_tag="MA5_00685"
/note="putative GSH binding site [chemical binding]; other
site"
/db_xref="CDD:239326"
misc_feature complement(order(164080..164082,164089..164091))
/locus_tag="MA5_00685"
/note="catalytic residues [active]"
/db_xref="CDD:239326"
gene 164237..164875
/locus_tag="MA5_00690"
/db_xref="GeneID:12007021"
CDS 164237..164875
/locus_tag="MA5_00690"
/note="COG0177 Predicted EndoIII-related endonuclease"
/codon_start=1
/transl_table=11
/product="endonuclease III"
/protein_id="YP_005404407.1"
/db_xref="GI:383486727"
/db_xref="GeneID:12007021"
/translation="MQAQIMNKIFEIFSKNNPKPQTELIYKNDFTLLVAVILSARATD
ISVNLATKHLFETYNTPEKFLELGEEGLKKYIKSIGLFNSKAKNIIALCQILIKNYQT
SIPNNFKELVKLPGVGRKTANVVLNCLFAMPTMAVDTHVFRVSKRIGLAKGNTAAIVE
KELLQIIDEKWLTYAHHWLILHGRYICKARKPGCNICPIKEYCEYYINTFSS"
misc_feature 164237..164869
/locus_tag="MA5_00690"
/note="Predicted EndoIII-related endonuclease [DNA
replication, recombination, and repair]; Region: Nth;
COG0177"
/db_xref="CDD:223255"
misc_feature 164324..164785
/locus_tag="MA5_00690"
/note="endonuclease III; includes endonuclease III
(DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA
glycosidases (Alka-family) and other DNA glycosidases;
Region: ENDO3c; cd00056"
/db_xref="CDD:238013"
misc_feature order(164357..164365,164372..164374,164489..164491)
/locus_tag="MA5_00690"
/note="minor groove reading motif; other site"
/db_xref="CDD:238013"
misc_feature 164576..164599
/locus_tag="MA5_00690"
/note="helix-hairpin-helix signature motif; other site"
/db_xref="CDD:238013"
misc_feature order(164606..164608,164762..164764,164774..164776)
/locus_tag="MA5_00690"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:238013"
misc_feature 164648..164650
/locus_tag="MA5_00690"
/note="active site"
/db_xref="CDD:238013"
misc_feature 164792..164854
/locus_tag="MA5_00690"
/note="iron-sulpphur binding domain in DNA-(apurinic or
apyrimidinic site) lyase (subfamily of ENDO3); Region:
FES; smart00525"
/db_xref="CDD:197771"
gene complement(165622..166464)
/locus_tag="MA5_00695"
/db_xref="GeneID:12007022"
CDS complement(165622..166464)
/locus_tag="MA5_00695"
/note="COG0313 Predicted methyltransferases"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404408.1"
/db_xref="GI:383486728"
/db_xref="GeneID:12007022"
/translation="MILKSGLYIVSTPIGNFEDITLRAISTLKNSDIILCEDTRISQK
LLAKHYIHTKLQIYNDHSDYKDREYIISLIKAGNVVSLISDAGTPLISDPGYKLVRDL
RNLNYYIEVVPGVSSPITALTLSSLPTDRFLFSGFLPKTIESKKKIFAELVNLKATLI
FFDTASRLINTLLLAKEIFGNREICVARELTKIYQETKTGDIDEIIEFYKNNILKGEI
VLLISGNVQVQNKQINLEKFIEFCLSKNLSSKTIIELAYDKFKDVYSKKEIYSVVHKK
KFTA"
misc_feature complement(165634..166464)
/locus_tag="MA5_00695"
/note="Predicted methyltransferases [General function
prediction only]; Region: COG0313"
/db_xref="CDD:223390"
misc_feature complement(165793..166446)
/locus_tag="MA5_00695"
/note="Ribosomal RNA small subunit methyltransferase I,
also known as rRNA (cytidine-2'-O-)-methyltransferase
RsmI; Region: RsmI; cd11648"
/db_xref="CDD:212507"
misc_feature complement(order(165808..165816,165895..165900,
165904..165906,165979..165981,166114..166119,
166189..166194,166201..166209,166423..166425))
/locus_tag="MA5_00695"
/note="putative SAM binding site [chemical binding]; other
site"
/db_xref="CDD:212507"
misc_feature complement(order(166057..166071,166096..166101,
166108..166113,166117..166128,166132..166134,
166165..166170,166174..166179,166186..166203,
166390..166392,166396..166407))
/locus_tag="MA5_00695"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:212507"
gene 166488..167603
/locus_tag="MA5_00700"
/db_xref="GeneID:12007023"
CDS 166488..167603
/locus_tag="MA5_00700"
/note="COG0683 ABC-type branched-chain amino acid
transport systems, periplasmic component"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_005404409.1"
/db_xref="GI:383486729"
/db_xref="GeneID:12007023"
/translation="MANIKHKLLIFLSFFCLLYLTSCQIHNEGEITIHKKEQKEIEIA
ILMPNQGPDAVVGKQYKDLIKMGLNDAVKSYIHVTSYDGSDEQNVLAAMDKIVARKTK
IILGPLYSNFTSLITEKAKANDIIIITMSNNPALAEDKLFVFGHAPLKQLIRIINYYG
DHHKDFMALLPQGKYSQTISQVMQNILIQKNSSLSHTEFYEDNPEAIEKAVRNISNNA
DIINERSDTTKPVIYLSDDPKNLNLLADSIRKYNLDKKAILIGDNRIDVDYSENIDIS
FTSTLNLFNSNVQDRAKDLGINHMGFMHLIAYDLGRMTANYIGNEFVSEIFLNRMHSR
QPYIGLSGNIHFIDGVAQRRYDIIRKENGVYFTITED"
misc_feature 166599..>167150
/locus_tag="MA5_00700"
/note="ABC-type branched-chain amino acid transport
systems, periplasmic component [Amino acid transport and
metabolism]; Region: LivK; COG0683"
/db_xref="CDD:223755"
misc_feature 166614..167558
/locus_tag="MA5_00700"
/note="Periplasmic binding component of lipoprotein LppC,
an immunodominant antigen; Region:
PBP1_YraM_LppC_lipoprotein_like; cd06339"
/db_xref="CDD:107334"
misc_feature order(166809..166817,166878..166883,167010..167012,
167193..167195,167274..167276)
/locus_tag="MA5_00700"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107334"
gene complement(167686..167850)
/gene="tatA"
/locus_tag="MA5_00705"
/db_xref="GeneID:12007024"
CDS complement(167686..167850)
/gene="tatA"
/locus_tag="MA5_00705"
/codon_start=1
/transl_table=11
/product="twin arginine translocase protein A"
/protein_id="YP_005404410.1"
/db_xref="GI:383486730"
/db_xref="GeneID:12007024"
/translation="MGMSFSHLLIVLLIIFVLFGAGKLPQVMSDLAKGLKAFKEGMKD
DGNDNDKTNN"
misc_feature complement(167725..167850)
/gene="tatA"
/locus_tag="MA5_00705"
/note="twin arginine translocase protein A; Provisional;
Region: tatA; PRK01470"
/db_xref="CDD:179298"
gene 167931..168536
/locus_tag="MA5_00710"
/db_xref="GeneID:12007025"
CDS 167931..168536
/locus_tag="MA5_00710"
/note="COG1267 Phosphatidylglycerophosphatase A and
related proteins"
/codon_start=1
/transl_table=11
/product="phosphatidylglycerophosphatase A (pgpA)"
/protein_id="YP_005404411.1"
/db_xref="GI:383486731"
/db_xref="GeneID:12007025"
/translation="MFTKKQFSEFFTTFFYIGKIKYCPGTFGSIAAFPVTYSLIYFVV
HHKIIIPFSNLTLGEAQLVSIFIINFIICLIFLMFGIYFTKIYLNYTNLQDPKEVVID
EVVGQMLTIVLVFFSALFANESHLMKYYSQLTRNIILLFILPFCLFRFFDIVKPWPIN
WFDKNIKGSIGIMLDDLLAAIFAAITQYAIIFVLIDIDNRL"
misc_feature 167955..168449
/locus_tag="MA5_00710"
/note="Phosphatidylglycerophosphatase A; a bacterial
membrane-associated enzyme involved in lipid metabolism;
Region: PgpA; cd06971"
/db_xref="CDD:133477"
misc_feature order(167961..167963,168027..168029,168114..168116,
168153..168158,168165..168170,168216..168218,
168225..168233,168240..168245,168249..168254,
168261..168263,168291..168293,168354..168359,
168363..168371,168375..168380,168384..168389)
/locus_tag="MA5_00710"
/note="tetramer interfaces [polypeptide binding]; other
site"
/db_xref="CDD:133477"
misc_feature order(168225..168227,168234..168239,168444..168446)
/locus_tag="MA5_00710"
/note="binuclear metal-binding site [ion binding]; other
site"
/db_xref="CDD:133477"
gene 168733..169050
/gene="rplU"
/locus_tag="MA5_00715"
/db_xref="GeneID:12007026"
CDS 168733..169050
/gene="rplU"
/locus_tag="MA5_00715"
/note="COG0261 Ribosomal protein L21"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L21"
/protein_id="YP_005404412.1"
/db_xref="GI:383486732"
/db_xref="GeneID:12007026"
/translation="MFAVIKAGGKQYKVDRNSVIKVEKIDGELGSKIQFDQILMIGEY
SKPSFIGTPIVKGAIVTAEITNQLKDNKIIAFKKKRRKNYRRKAGHRQELTELKILDI
TKQ"
misc_feature 168733..>169038
/gene="rplU"
/locus_tag="MA5_00715"
/note="50S ribosomal protein L21/unknown domain fusion
protein; Provisional; Region: PRK12278"
/db_xref="CDD:237034"
misc_feature 168733..169038
/gene="rplU"
/locus_tag="MA5_00715"
/note="50S ribosomal protein L21; Validated; Region: rplU;
PRK05573"
/db_xref="CDD:235510"
gene 169075..169335
/gene="rpmA"
/locus_tag="MA5_00720"
/db_xref="GeneID:12007027"
CDS 169075..169335
/gene="rpmA"
/locus_tag="MA5_00720"
/note="COG0211 Ribosomal protein L27"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L27"
/protein_id="YP_005404413.1"
/db_xref="GI:383486733"
/db_xref="GeneID:12007027"
/translation="MATKKAGGSSRNGRDSAGRRLGVKKSDGQYVIPGNIIVRQRGTK
IHPGINVGLGKDHTIFSLIEGRVEFLTKQSHKIVNVKEIANV"
misc_feature 169075..169317
/gene="rpmA"
/locus_tag="MA5_00720"
/note="50S ribosomal protein L27; Validated; Region: rpmA;
PRK05435"
/db_xref="CDD:235464"
gene 169586..170926
/locus_tag="MA5_00725"
/db_xref="GeneID:12007028"
CDS 169586..170926
/locus_tag="MA5_00725"
/EC_number="2.7.2.4"
/note="COG0527 Aspartokinases"
/codon_start=1
/transl_table=11
/product="aspartate kinase"
/protein_id="YP_005404414.1"
/db_xref="GI:383486734"
/db_xref="GeneID:12007028"
/translation="MALIIQKFGGTSVANVERIKKLVPIIKAEIAKNNQVIVVVSAMA
GVTNQLVTLCNEVSSLNKRSQFAEYDVALSSGEIVTASLLALALQEEEIKAQSLLAWQ
LPIRTNNNYSKALVEFITTDLLEKYLQLKIIPIIAGFQGINKSNRVTTLGRGGSDTTA
ALIAAAMKADRCDIYTDVDGIFTADPRIIPNAKRIKEIDFLEMLELASSGAKVLHPRA
VELVMRYKIDMRVLSTFSPNTEGTLITSKDTIPLVKSTYMEESALNTKHSTKIDIPED
ASGSTYKLPIELALQNRYNMENCVVRCITSNKNLLKVSVNSISLSFLQVANMITYNNN
CIEFMQEIENNIEYNFITNLTDKNNLQTLLTKCKNNKQIQDFTFDTEIATISLIGYGI
KNDCKLLTMILSQLTQDNINVHMMQLSEVKITLLINDKDVEKTIFNLYNLFKIS"
misc_feature 169586..170923
/locus_tag="MA5_00725"
/note="aspartate kinase; Reviewed; Region: PRK06635"
/db_xref="CDD:235843"
misc_feature 169592..170320
/locus_tag="MA5_00725"
/note="AAK_AK-DapG-like: Amino Acid Kinase Superfamily
(AAK), AK-DapG-like; this CD includes the N-terminal
catalytic aspartokinase (AK) domain of the
diaminopimelate-sensitive aspartokinase isoenzyme AKI
(DapG), a monofunctional enzymes found in Bacilli; Region:
AAK_AK-DapG-like; cd04246"
/db_xref="CDD:239779"
misc_feature order(169604..169606,169724..169726,169814..169816,
170054..170056,170189..170191,170228..170230)
/locus_tag="MA5_00725"
/note="putative catalytic residues [active]"
/db_xref="CDD:239779"
misc_feature order(169604..169606,169610..169618,170114..170119,
170126..170131)
/locus_tag="MA5_00725"
/note="putative nucleotide binding site [chemical
binding]; other site"
/db_xref="CDD:239779"
misc_feature order(169706..169711,169724..169726,169814..169816)
/locus_tag="MA5_00725"
/note="putative aspartate binding site [chemical binding];
other site"
/db_xref="CDD:239779"
misc_feature 170336..170449
/locus_tag="MA5_00725"
/note="Rickettsial palindromic element RPE1 domain;
Region: RPE1; TIGR01045"
/db_xref="CDD:233246"
misc_feature 170732..170920
/locus_tag="MA5_00725"
/note="ACT domains of the lysine-sensitive, aspartokinase
(AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168
and related domains; Region: ACT_AKii-LysC-BS-like_2;
cd04936"
/db_xref="CDD:153208"
misc_feature 170732..170734
/locus_tag="MA5_00725"
/note="putative allosteric regulatory residue; other site"
/db_xref="CDD:153208"
gene 171335..171826
/locus_tag="MA5_00730"
/db_xref="GeneID:12007029"
CDS 171335..171826
/locus_tag="MA5_00730"
/note="COG1396 Predicted transcriptional regulators"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404415.1"
/db_xref="GI:383486735"
/db_xref="GeneID:12007029"
/translation="MREDMRSTESNRINDTSVTNKDNPEEMRNNFKKFVLNILETDNI
TPYQLSEKTGTHETAWKNFLDGRTKMPDMGAIVALADYKNVPLDKLIGREINKEHKMT
LEIKQTSKISSSTSKIPKDILQEAMLIGEKTQQFINKPTTKETKSYTKPIKRSHKPDA
RSI"
misc_feature 171446..171604
/locus_tag="MA5_00730"
/note="Helix-turn-helix XRE-family like proteins; Region:
HTH_XRE; smart00530"
/db_xref="CDD:197775"
misc_feature order(171449..171451,171524..171526)
/locus_tag="MA5_00730"
/note="salt bridge; other site"
/db_xref="CDD:238045"
misc_feature order(171452..171454,171527..171529)
/locus_tag="MA5_00730"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238045"
misc_feature order(171470..171475,171506..171508,171515..171517,
171527..171532)
/locus_tag="MA5_00730"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
gene complement(172810..174051)
/locus_tag="MA5_00735"
/db_xref="GeneID:12007030"
CDS complement(172810..174051)
/locus_tag="MA5_00735"
/note="COG0477 Permeases of the major facilitator
superfamily"
/codon_start=1
/transl_table=11
/product="proline/betaine transporter (proP5)"
/protein_id="YP_005404416.1"
/db_xref="GI:383486736"
/db_xref="GeneID:12007030"
/translation="MKQIKSRNKVLGAFLGTIIEYYDYSLYGFSAAIIADKFFSACTD
PLTKLVNVFAVYAAAYLSKPMGSYVFGHIGDIYGRKKALSFTVVGIVIPTLIIGLLPD
YSSIGVWSTIILVLCRFMQGLFIGGEYDGAAIYVIEHLGTKYRFTASAITRCTGVMGL
LCGIAATNFFNSHIFPEWSWRIPFLLSVPLALITLYYRRKFDETPEFKKANYSNDSIE
KMSAIIKKQWTNIVRLIFLAGGFGATYQIAIIFMKQYLPIVLPSVAIIMSSFSVLIVI
CFAVCMPIAGLIADRLGVNLVLKIAFICTITASVFFVIAVKYQMTNLGLAVSLMLAGS
VAPFNALAHSIVIKSFVVKERYRVISLGHNIGSMLMSGTANYICAKVIKSFDFNLFPI
LYLCMFTVLAYAINILFSKND"
misc_feature complement(172825..174024)
/locus_tag="MA5_00735"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(172846..174006)
/locus_tag="MA5_00735"
/note="metabolite-proton symporter; Region: 2A0106;
TIGR00883"
/db_xref="CDD:188094"
misc_feature complement(order(172939..172941,172948..172953,
172960..172962,172966..172968,172975..172980,
173011..173013,173020..173025,173035..173037,
173044..173049,173056..173058,173206..173208,
173218..173220,173227..173229,173239..173241,
173251..173253,173293..173295,173302..173307,
173314..173319,173326..173328,173572..173574,
173590..173595,173602..173607,173641..173643,
173650..173655,173662..173667,173674..173679,
173839..173844,173848..173853,173872..173874,
173881..173886,173893..173895,173956..173961,
173965..173973,173980..173982))
/locus_tag="MA5_00735"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(174373..174690)
/locus_tag="MA5_00740"
/db_xref="GeneID:12007031"
CDS complement(174373..174690)
/locus_tag="MA5_00740"
/note="COG3027 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404417.1"
/db_xref="GI:383486737"
/db_xref="GeneID:12007031"
/translation="MPIVTVTLNNKSFQLYCNNGDEEKVLSLADKLNDKIAEIKLSSP
TASFDLLLVMASLNAQAEIAILTEKLYKNGFQNNNHEEEKFAETLTTIASYLENLARK
MEK"
misc_feature complement(174385..174690)
/locus_tag="MA5_00740"
/note="Cell division protein ZapA (stimulator of FtsZ
polymerization and Z-ring component) [Cell cycle control,
cell division, chromosome partitioning]; Region: zapA;
COG3027"
/db_xref="CDD:225571"
gene complement(174693..174896)
/locus_tag="MA5_00745"
/db_xref="GeneID:12007032"
CDS complement(174693..174896)
/locus_tag="MA5_00745"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404418.1"
/db_xref="GI:383486738"
/db_xref="GeneID:12007032"
/translation="MDNKILKRLMEEVEHKLDELLQAQTHNHNEVKKLQNENKKLKDN
YIKILDQIKIYINELEEIKKQQK"
gene complement(174909..175271)
/locus_tag="MA5_00750"
/db_xref="GeneID:12007033"
CDS complement(174909..175271)
/locus_tag="MA5_00750"
/note="COG1426 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404419.1"
/db_xref="GI:383486739"
/db_xref="GeneID:12007033"
/translation="MSSMLKQIRLDAGKSLNQVSSDLKIRKKYLVALEEGDFDVLPGE
VYVRGYLKLYLDYLNVKDRNTAQIEVTKQNESEKLLINKRATALINYKRKKQLVLISI
MMLSIIIVSHQFIINVTN"
misc_feature complement(<174987..175271)
/locus_tag="MA5_00750"
/note="Predicted transcriptional regulator contains
Xre-like HTH domain [Function unknown]; Region: COG1426"
/db_xref="CDD:31615"
misc_feature complement(175092..175262)
/locus_tag="MA5_00750"
/note="Helix-turn-helix domain; Region: HTH_25; pfam13413"
/db_xref="CDD:205591"
gene complement(175275..180020)
/locus_tag="MA5_00755"
/db_xref="GeneID:12007034"
CDS complement(175275..180020)
/locus_tag="MA5_00755"
/note="COG2902 NAD-specific glutamate dehydrogenase"
/codon_start=1
/transl_table=11
/product="NAD-specific glutamate dehydrogenase"
/protein_id="YP_005404420.1"
/db_xref="GI:383486740"
/db_xref="GeneID:12007034"
/translation="MVSKTLNFRRLNCQIPNYKTKILELSKERESSPIYIDFIQKFLN
YIPIDYDFENREKLFQNFADEAFKFFQQRVDRARKISITKSVIENDPAINILILLDNK
PHIVDVIICLLKNMNLQAKFLLHPVINCMRNSQGELEKIYENSVLDEKSELILHLTIL
GNFDDKTTQFLTEAINERLEELQQSYIHLPQLLTKLQDLSKNIIDNDKFNFGEAKEFL
NWLQNDNLVLLGTFDFEVKSLKLSNEIGVAKIWQEVRDEIDDIIKCSANTLYQNQLII
LGKVNSISLIHSDNLIDYILVKKFDSSGEYISGSIIFGIYNANMYYYSISNIPILRQK
FNFVIEKAGFSLSGYNADKLRILIESLPRAALIQIDQSDLYCMCLHMLSSMMSKKLKL
FIQYDWSNSFLNIIIFLPRERLTAEIHNMIDCYLSEKFGSKILSNYITEVAGNFSYLF
VTLEAQGVHKINFEAEIIQQDLDRISTRWSEDFYFKLSKKFGEYQAGINLKIFDNVFP
PDYRQKFSPEIALIDIEYLKNASESQACMFNLVSVNETEFYLKIYSPKVKLALSNILP
SIENLGFKAIDEQTFAIKEAMEIKESWIYNFILTSIVPVKDNISALKINVEEALDQMA
LGMLANDSLSKLIVLAGFNWKQVKLIKALTRYLHQTGFSYGKGYVQLTLLKHPEYTKM
LVNLFDIKFNPKHPDNNYDAIQDKLNNYLVTVEMSSEDKVLRSMLGIVNAITRTNYYQ
PHKHIFSFKFDSSKVPNLPKPIPFAEVFVYSRNFEAIHLRGGPVSRGGLRWSDRAEDY
RFEILGLMKAQMTKNSVIVPVGSKGGFYVNFTEEGLTRDEYMEKVVECYKNFLRGLLD
ITDNIIDGKVVHPKDMIIYDTQDPYLVVAADKGTASFSDYANSVAKEYNYWLDDAFAS
GGSAGYDHKKMAITSKGAWISVTNHFKTLGLDVQKDNITVVGIGDMSGDVFGNGMLRS
KAIKLVAAFNHKHIFIDPNPNPLLSFNERLRLFNLNGSNWSDYDSTLISKGGNVFERS
SKLLKLSPEIKELLDINANEMSPEELIRAILKADVDLLWNGGIGTYIKAKTENNLEIG
DKANDNLRCNGEEIRAKVIAEGGNVGVSQRGRVEYAKKGGRINADFIDNSAGVDCSDH
EVNIKIALSSAVTSGKITLEERNKLLIDMTKQVEELVLLDNYKQTEAITIMQLSPTLT
VNILSQFIDILEEEKVLERDNEFLPSVEELNRRATSGEVLTRPELCVLLSYSKRAAYH
ELINSTFFHDKYFDAYLIDYFPKMMQKKFRNEILSHPLKYEIIKTVTINKIINQLGGP
LISIVKLEIGAPLCDIIRSYTIICEIFALDDIWETISNLSTHVDYNVKIDMFTEVTKL
MRRGISWFIKNSKHPINISETIEEFRGPAQNLRKMISTLLVGEAKVRFAEKLNYYTTS
GVEESFAATIATFDNLISVFDIIYVTKETDGNNTKIAKAYFDISNMFSLDWLRKVCDK
QLNDSFWRRLGLQSLKDDLYDKQRRLLIKIINKSKTTIDLNLWIDNNNNLVSNFLDFI
KEIKAQETIDLNIIILANKKFEIFLQKLE"
misc_feature complement(175281..180020)
/locus_tag="MA5_00755"
/note="NAD-specific glutamate dehydrogenase [Amino acid
transport and metabolism]; Region: COG2902"
/db_xref="CDD:225455"
misc_feature complement(176478..176729)
/locus_tag="MA5_00755"
/note="Glutamate/Leucine/Phenylalanine/Valine
dehydrogenase; Region: ELFV_dehydrog; smart00839"
/db_xref="CDD:214847"
gene 180108..181445
/gene="trmE"
/locus_tag="MA5_00760"
/db_xref="GeneID:12007035"
CDS 180108..181445
/gene="trmE"
/locus_tag="MA5_00760"
/note="COG0486 Predicted GTPase"
/codon_start=1
/transl_table=11
/product="tRNA modification GTPase TrmE"
/protein_id="YP_005404421.1"
/db_xref="GI:383486741"
/db_xref="GeneID:12007035"
/translation="METIFAQSSAFGKAGVAVFRISGPKSLEVLQLLTGRKDFKPRLM
YYQQIIVPETNELIDNAMVVYFKLPNSFTGEDVVEIHTHGSKAISIMLINTLLNIADI
RLAEAGEFTKRAFLNNKFDLTAAEGIADLINAETIMQHRQAVRQANGGLKELYNKWRN
QLLKIISLLEAYIDFPDEDIPESILNDVNNTHKNIVNEISNYLNDNRRGELLNNGLKL
AIIGPPNTGKSSLLNFLMQRNIAIVSNIAGTTRDIIEGHLDIGGYPIILQDTAGIRTE
STDIIEQEGIKRAINSAKTANIKIVMFDAEKLDSSINNDITGLIDENTIVIINKIDLI
EPNKTFAIENRYKCLRVSVKNNIALSNILKNIENIAENLAGVTETPYITNQRHRHYLK
QALSHLIDFNLDNDLVLATEDIRMTVRCIGLITGVINVEEILNEIFKNFCIGK"
misc_feature 180108..181442
/gene="trmE"
/locus_tag="MA5_00760"
/note="Predicted GTPase [General function prediction
only]; Region: ThdF; COG0486"
/db_xref="CDD:223561"
misc_feature 180114..180464
/gene="trmE"
/locus_tag="MA5_00760"
/note="GTP-binding protein TrmE N-terminus; Region:
TrmE_N; pfam10396"
/db_xref="CDD:204472"
misc_feature 180540..>180815
/gene="trmE"
/locus_tag="MA5_00760"
/note="Adenovirus IVa2 protein; Region: Adeno_IVa2;
pfam02456"
/db_xref="CDD:145542"
misc_feature 180747..181220
/gene="trmE"
/locus_tag="MA5_00760"
/note="trmE is a tRNA modification GTPase; Region: trmE;
cd04164"
/db_xref="CDD:206727"
misc_feature 180771..180794
/gene="trmE"
/locus_tag="MA5_00760"
/note="G1 box; other site"
/db_xref="CDD:206727"
misc_feature order(180780..180782,180786..180797,181092..181097,
181101..181103,181161..181169)
/gene="trmE"
/locus_tag="MA5_00760"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206727"
misc_feature 180816..180866
/gene="trmE"
/locus_tag="MA5_00760"
/note="Switch I region; other site"
/db_xref="CDD:206727"
misc_feature 180855..180857
/gene="trmE"
/locus_tag="MA5_00760"
/note="G2 box; other site"
/db_xref="CDD:206727"
misc_feature order(180909..180929,180933..180944,180948..180992)
/gene="trmE"
/locus_tag="MA5_00760"
/note="Switch II region; other site"
/db_xref="CDD:206727"
misc_feature 180912..180923
/gene="trmE"
/locus_tag="MA5_00760"
/note="G3 box; other site"
/db_xref="CDD:206727"
misc_feature 181092..181103
/gene="trmE"
/locus_tag="MA5_00760"
/note="G4 box; other site"
/db_xref="CDD:206727"
misc_feature 181161..181169
/gene="trmE"
/locus_tag="MA5_00760"
/note="G5 box; other site"
/db_xref="CDD:206727"
misc_feature 181236..181433
/gene="trmE"
/locus_tag="MA5_00760"
/note="Catalytic cysteine-containing C-terminus of GTPase,
MnmE; Region: GTPase_Cys_C; pfam12631"
/db_xref="CDD:204989"
gene 181860..182975
/locus_tag="MA5_00765"
/db_xref="GeneID:12007036"
CDS 181860..182975
/locus_tag="MA5_00765"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404422.1"
/db_xref="GI:383486742"
/db_xref="GeneID:12007036"
/translation="MHNADCNWKNIMQSFTESPNDFSILHQECSSGLNIPINNIFTDT
ENNTHLLLDQTVTHNQNGTANILGKIYKVTNGYMFSQGDITSTNGANFLGLNQCTEEA
AISVLQNYHSYKETLIPRASFINTLAETLNHLGLYLDNISPMEIGKYILDQFGKTYDE
PTTEKSNNDTNCHEYSNSYYYVVALGTLALGSILGYTAKYVWDNYNGKNIKNENIELV
RENKQLKFSTLLYENFKNNAFILDEIIKINNLNDIIKLAKSMQEFKSSISSLTNLNNE
IIKLNSPSAIALNLASVSKILHEICDKGNDSFTTINNFAKLITMIRTENPDSEEYKAS
IKEILEIFSSHYEEIEELNYATPLLAIEAYSPLEIIE"
gene 184453..185475
/gene="recA"
/locus_tag="MA5_00770"
/db_xref="GeneID:12007037"
CDS 184453..185475
/gene="recA"
/locus_tag="MA5_00770"
/note="COG0468 RecA/RadA recombinase"
/codon_start=1
/transl_table=11
/product="recombinase A"
/protein_id="YP_005404423.1"
/db_xref="GI:383486743"
/db_xref="GeneID:12007037"
/translation="MSNIDKERAIAAALAQIEKSYGKGSVMKLGQRPNVDIEAISTGS
LGLDIALGIGGVPKGRIIEIFGPESSGKTTLTLHLIAESQKKGGTCAFIDAEHALDPA
YAKKLGVNIDELIISQPDTGEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMG
DAQMASQARLMSQALRKLTASINRTNCITVFINQIRMKIGVMFGSPETTTGGNALKFY
ASVRIDIRRIGSIKDKEEVIGSQTKVKVVKNKVSPPFKTADFDIMYGSGISKEGEIID
LGVKLEIIEKSGSWFSYNKIRIGQGRENVKQYLKEHPQISNEIEKIIREKSSAITNIN
LDQTEE"
misc_feature 184453..185472
/gene="recA"
/locus_tag="MA5_00770"
/note="recombinase A; Provisional; Region: recA; PRK09354"
/db_xref="CDD:236476"
misc_feature 184465..185439
/gene="recA"
/locus_tag="MA5_00770"
/note="RecA is a bacterial enzyme which has roles in
homologous recombination, DNA repair, and the induction of
the SOS response. RecA couples ATP hydrolysis to DNA
strand exchange; Region: recA; cd00983"
/db_xref="CDD:238483"
misc_feature order(184489..184494,184498..184503,184510..184512,
184522..184536,184741..184746,184750..184770,
184783..184788,185089..185091,185101..185103,
185245..185247,185383..185385)
/gene="recA"
/locus_tag="MA5_00770"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:238483"
misc_feature 184648..184671
/gene="recA"
/locus_tag="MA5_00770"
/note="Walker A motif; other site"
/db_xref="CDD:238483"
misc_feature order(184654..184674,184738..184740,184750..184752,
184759..184761,184882..184884,185032..185034,
185131..185133,185170..185172,185236..185247)
/gene="recA"
/locus_tag="MA5_00770"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238483"
misc_feature 184870..184884
/gene="recA"
/locus_tag="MA5_00770"
/note="Walker B motif; other site"
/db_xref="CDD:238483"
gene 185477..186202
/gene="fabG"
/locus_tag="MA5_00775"
/db_xref="GeneID:12007038"
CDS 185477..186202
/gene="fabG"
/locus_tag="MA5_00775"
/EC_number="1.1.1.100"
/note="COG1028 Dehydrogenases with different specificities
(related to short-chain alcohol dehydrogenases)"
/codon_start=1
/transl_table=11
/product="3-ketoacyl-ACP reductase"
/protein_id="YP_005404424.1"
/db_xref="GI:383486744"
/db_xref="GeneID:12007038"
/translation="MIDLTGKTSLITGASGGIGSAIARLLHKLGSKVIISGSNEEKLK
SLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDK
VIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTK
SLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAF
LASNNASYITGQTLHVNGGMLMV"
misc_feature 185546..186190
/gene="fabG"
/locus_tag="MA5_00775"
/note="3-oxoacyl-(acyl-carrier-protein) reductase; Region:
3oxo_ACP_reduc; TIGR01830"
/db_xref="CDD:162551"
misc_feature 185546..186190
/gene="fabG"
/locus_tag="MA5_00775"
/note="beta-Keto acyl carrier protein reductase (BKR),
involved in Type II FAS, classical (c) SDRs; Region:
BKR_SDR_c; cd05333"
/db_xref="CDD:187594"
misc_feature order(185549..185551,185561..185563,185678..185680,
185744..185755,185759..185767,185774..185779,
185786..185788,185798..185803,185810..185815,
185819..185824,185831..185836,185843..185845,
185891..185914,185921..185926,185933..185938,
185945..185950,185954..185971,185975..185980,
186014..186016,186077..186085,186089..186100,
186107..186109,186116..186121,186125..186130,
186140..186142,186149..186187)
/gene="fabG"
/locus_tag="MA5_00775"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:187594"
misc_feature order(185585..185590,185651..185659,185723..185734,
185792..185794,185873..185881,185918..185920,
185930..185932,186008..186013,186017..186019,
186023..186031)
/gene="fabG"
/locus_tag="MA5_00775"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187594"
misc_feature order(185747..185755,185759..185761,185765..185767,
185774..185779,185786..185788,185798..185803,
185810..185815,185822..185824,185831..185836,
185843..185845,185888..185914,185921..185926,
185933..185938,185945..185950,185954..185962,
185966..185971)
/gene="fabG"
/locus_tag="MA5_00775"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187594"
misc_feature order(185795..185797,185879..185881,185918..185920,
185930..185932)
/gene="fabG"
/locus_tag="MA5_00775"
/note="active site"
/db_xref="CDD:187594"
gene 186369..186614
/gene="acpP"
/locus_tag="MA5_00780"
/db_xref="GeneID:12007039"
CDS 186369..186614
/gene="acpP"
/locus_tag="MA5_00780"
/note="COG0236 Acyl carrier protein"
/codon_start=1
/transl_table=11
/product="acyl carrier protein"
/protein_id="YP_005404425.1"
/db_xref="GI:383486745"
/db_xref="GeneID:12007039"
/translation="MSTTDKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTV
ELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKERQS"
misc_feature 186381..186611
/gene="acpP"
/locus_tag="MA5_00780"
/note="acyl carrier protein; Provisional; Region: acpP;
PRK00982"
/db_xref="CDD:179197"
gene 186648..187928
/locus_tag="MA5_00785"
/db_xref="GeneID:12007040"
CDS 186648..187928
/locus_tag="MA5_00785"
/EC_number="2.3.1.179"
/note="COG0304 3-oxoacyl-(acyl-carrier-protein) synthase"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-(acyl carrier protein) synthase II"
/protein_id="YP_005404426.1"
/db_xref="GI:383486746"
/db_xref="GeneID:12007040"
/translation="MSNQNINKRVVITGLGLVTPVGLNVSSTWKNIVGGVSGIKTITE
FDTSKLACKIAGVIDNSEQNGFKLENFTQADDINRLSKMDKFIHYGIAAATEAVEDSG
WLPKDEKSRDRTGLILGSGIGGLKMIEDTSIKLYKENNGKVSPFFIPASLINLLSGLV
SIKYGFSGPNQAAVTACSTGAHAIGDAMRMIKHGYADVMIAGGAEAPVTPVGIAGFVA
ARALCTKYNDNPEKASRPWDKDRSGFVMGEGAGIVVLEEYEHAINRGAKIYCEVIGYG
STGDAYHMTAPHPKGRGAYRAMSEALQDADITPSMIDYINAHGTSTPLGDMIELDATQ
KLFLESNPKILMSSTKSSIGHLLGAAGSVEFIFSVLTIRDQIAPPTLNLENPIDDVKI
DLVKFKARETVIDYVLSNSFGFGGTNASLVIKKI"
misc_feature 186666..187925
/locus_tag="MA5_00785"
/note="3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed; Region: PRK07314"
/db_xref="CDD:235987"
misc_feature 186669..187916
/locus_tag="MA5_00785"
/note="Beta-ketoacyl-acyl carrier protein (ACP) synthase
(KAS), type I and II. KASs are responsible for the
elongation steps in fatty acid biosynthesis. KASIII
catalyses the initial condensation and KAS I and II
catalyze further elongation steps by Claisen...; Region:
KAS_I_II; cd00834"
/db_xref="CDD:238430"
misc_feature order(187008..187010,187029..187034,187044..187046,
187050..187055,187089..187091,187107..187109,
187119..187121,187131..187133,187149..187151,
187155..187157,187161..187169,187203..187205,
187212..187217,187224..187226,187287..187292,
187299..187304,187479..187493,187533..187535,
187890..187892,187896..187898)
/locus_tag="MA5_00785"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238430"
misc_feature order(187176..187178,187599..187601,187710..187712)
/locus_tag="MA5_00785"
/note="active site"
/db_xref="CDD:238430"
gene complement(188502..189095)
/gene="gmk"
/locus_tag="MA5_00790"
/db_xref="GeneID:12007041"
CDS complement(188502..189095)
/gene="gmk"
/locus_tag="MA5_00790"
/EC_number="2.7.4.8"
/note="COG0194 Guanylate kinase"
/codon_start=1
/transl_table=11
/product="guanylate kinase"
/protein_id="YP_005404427.1"
/db_xref="GI:383486747"
/db_xref="GeneID:12007041"
/translation="MKFKNKGLIIILSSPSGTGKSSLAKELLKIDNNLRLSISVTTRK
PRLGEVDGINYYFKSDREFKTLVKQNKFLEYAKIYNDYYGTPKEYVKMLLKQDFDVLF
DIDWQGVRSIKKNTNTVITIFILPPSIEILEQRLRNRATDNEETIKLRMQSAQNEISH
ANEYDYVVINDDFSQTLKKIHEIIVAERAKNFAYHEY"
misc_feature complement(188520..189080)
/gene="gmk"
/locus_tag="MA5_00790"
/note="Guanylate kinase [Nucleotide transport and
metabolism]; Region: Gmk; COG0194"
/db_xref="CDD:30543"
misc_feature complement(188556..189071)
/gene="gmk"
/locus_tag="MA5_00790"
/note="Guanosine monophosphate kinase (GMPK, EC 2.7.4.8),
also known as guanylate kinase (GKase), catalyzes the
reversible phosphoryl transfer from adenosine triphosphate
(ATP) to guanosine monophosphate (GMP) to yield adenosine
diphosphate (ADP) and guanosine...; Region: GMPK; cd00071"
/db_xref="CDD:73180"
misc_feature complement(order(188847..188849,188862..188864,
188931..188933,188958..188960,188967..188969,
188988..188990,189036..189038,189054..189056))
/gene="gmk"
/locus_tag="MA5_00790"
/note="catalytic site [active]"
/db_xref="CDD:73180"
misc_feature complement(order(189036..189038,189054..189056))
/gene="gmk"
/locus_tag="MA5_00790"
/note="G-X2-G-X-G-K; other site"
/db_xref="CDD:73180"
gene complement(189212..189448)
/locus_tag="MA5_00795"
/db_xref="GeneID:12007042"
CDS complement(189212..189448)
/locus_tag="MA5_00795"
/note="COG1396 Predicted transcriptional regulators"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404428.1"
/db_xref="GI:383486748"
/db_xref="GeneID:12007042"
/translation="MALATKVKEFLEEKLKQEKIDRKYLAQVTNIPYTTVSRIMRAEA
NREFNPEIDTILKIAKYFNCTMDEVIKRKVHNNS"
misc_feature complement(189242..>189385)
/locus_tag="MA5_00795"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:238045"
misc_feature complement(order(189323..189328,189338..189340,
189347..189349,189380..189385))
/locus_tag="MA5_00795"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
misc_feature complement(189329..189331)
/locus_tag="MA5_00795"
/note="salt bridge; other site"
/db_xref="CDD:238045"
gene complement(190117..190956)
/locus_tag="MA5_00800"
/db_xref="GeneID:12007043"
CDS complement(190117..190956)
/locus_tag="MA5_00800"
/note="COG1792 Cell shape-determining protein"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein MreC"
/protein_id="YP_005404429.1"
/db_xref="GI:383486749"
/db_xref="GeneID:12007043"
/translation="MAILANRVKNSSNSLELIRIISNILKRFCVIFGFILSIYLFFIT
PKKISSISLEVTGSIVSIGLAIYKDIFEYINLVTQKFIYFQDLERKNIELKLEIARLQ
HLQSEVESVKAENIALKDLLMIAEEEEFEYFTTKLLSVSFNPFSRTALIGAGKKQGIE
PDQIVVNSGKLIGKVIEVSNNYSKVMLISDVNSRIPIKANSSREQGILAGNNNNSKIL
YLPNNHLVQKDEEIVTSGHGNIYPAGILVGYVSKVTENDVIVTLAADLSKMEFVQILL
PKQ"
misc_feature complement(190132..190908)
/locus_tag="MA5_00800"
/note="Cell shape-determining protein [Cell envelope
biogenesis, outer membrane]; Region: MreC; COG1792"
/db_xref="CDD:224705"
misc_feature complement(190123..190551)
/locus_tag="MA5_00800"
/note="rod shape-determining protein MreC; Region: MreC;
pfam04085"
/db_xref="CDD:217883"
gene complement(190959..191999)
/locus_tag="MA5_00805"
/db_xref="GeneID:12007044"
CDS complement(190959..191999)
/locus_tag="MA5_00805"
/note="COG1077 Actin-like ATPase involved in cell
morphogenesis"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein MreB"
/protein_id="YP_005404430.1"
/db_xref="GI:383486750"
/db_xref="GeneID:12007044"
/translation="MIMKFLEGFSSGMAIDLGTANTIVYQKSRGIVLREPSVIALIKK
DGAFVPYAYGHEAKMMLGRTPTDIEAKRPLKDGVIADFKGAEEMIKYFIKMVHNRRSF
FGPTIVICVPSGSTPVERRAIQEAAESAGGRDVYLIEEPMAAAIGAGLPVTEATGSMI
VDIGGGTTEVAVLSLGGIVYARSVRVGGDKMDEAIISYIRRHYNLLIGEATAEKIKQE
IGTAYVDENAEPRKMEIKGRDLIYGIPKEMILNERQIADSLIEPVSQIVEAVKVALEA
TPPELSSDIVDKGIVLTGGGSLLRNLDFVLSEATKLPVIVADDALSCVALGTGKVLED
FTKLKHVLFKQD"
misc_feature complement(190968..191975)
/locus_tag="MA5_00805"
/note="rod shape-determining protein MreB; Provisional;
Region: PRK13927"
/db_xref="CDD:237562"
misc_feature complement(190995..191963)
/locus_tag="MA5_00805"
/note="MreB and similar proteins; Region: MreB_like;
cd10225"
/db_xref="CDD:212668"
misc_feature complement(order(191028..191030,191037..191039,
191103..191108,191112..191120,191349..191354,
191361..191363,191433..191438,191499..191510,
191514..191516,191580..191582,191769..191771,
191937..191948,191952..191954))
/locus_tag="MA5_00805"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212668"
misc_feature complement(order(191514..191516,191952..191954))
/locus_tag="MA5_00805"
/note="Mg binding site [ion binding]; other site"
/db_xref="CDD:212668"
misc_feature complement(order(191064..191066,191160..191162,
191169..191171,191259..191261,191268..191270,
191292..191294,191367..191369,191373..191375,
191469..191471,191529..191531,191535..191537,
191796..191798,191820..191822,191874..191876))
/locus_tag="MA5_00805"
/note="putative protofilament interaction site
[polypeptide binding]; other site"
/db_xref="CDD:212668"
misc_feature complement(order(191046..191048,191055..191057,
191061..191063,191136..191144,191526..191528,
191550..191555))
/locus_tag="MA5_00805"
/note="RodZ interaction site [polypeptide binding]; other
site"
/db_xref="CDD:212668"
gene complement(192207..193295)
/locus_tag="MA5_00810"
/db_xref="GeneID:12007045"
CDS complement(192207..193295)
/locus_tag="MA5_00810"
/note="COG0795 Predicted permeases"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404431.1"
/db_xref="GI:383486751"
/db_xref="GeneID:12007045"
/translation="MINLKTLSLYLTKLYSKCFFIILFLLIGLLIISNIFDLLQKFKN
IYVPFSFFWRFILYKIPYLLSQVSSLISFTSMLFFLRNLTKSNELTAILSSGIHIWQV
LIIPCIVTLILGIICTTILNPISTIGLQKYSLLEAKLTKKALSECLISESGLLFFESL
NEHNQIIQTKFIDVAEKKLNNITILFIDNNNSFLKRIDALYGIIDNKKLYLNRVKVST
KDEIKSYSNLTIQTNLSINSLVNKFMRPEMVSIWALPKLINELLNSGLSAINYQIYYY
KQLFKPIMMMATVILASCFISLKQRCNSQEKILILGLFSGFIAYSLSEILLKILTYNN
LSLIAAILLPSMLIFFISNFIILHYKEI"
misc_feature complement(192222..193196)
/locus_tag="MA5_00810"
/note="Predicted permease YjgP/YjgQ family; Region:
YjgP_YjgQ; pfam03739"
/db_xref="CDD:217705"
misc_feature complement(192219..193184)
/locus_tag="MA5_00810"
/note="Predicted permeases [General function prediction
only]; Region: COG0795"
/db_xref="CDD:223866"
gene complement(193337..193413)
/locus_tag="MA5_t04319"
/db_xref="GeneID:12007046"
tRNA complement(193337..193413)
/locus_tag="MA5_t04319"
/product="tRNA-Met"
/db_xref="GeneID:12007046"
gene complement(193805..194272)
/locus_tag="MA5_00815"
/db_xref="GeneID:12007047"
CDS complement(193805..194272)
/locus_tag="MA5_00815"
/note="COG2885 Outer membrane protein and related
peptidoglycan-associated (lipo)proteins"
/codon_start=1
/transl_table=11
/product="peptidoglycan-associated lipoprotein"
/protein_id="YP_005404432.1"
/db_xref="GI:383486752"
/db_xref="GeneID:12007047"
/translation="MKTKITLAFLALFMLAGCNTTKKTTQMAGMVHQCEETSLIKDFE
KHAGNAVWFAFDSSSLSPKAKEELERQACWLSKHPEVKVTVEGHCDERGTREYNLALG
ERRAAAAKQFLANKGIAHNRLNTISYGKDKPAMIGNTEEAFSYNRRAVTVLHK"
misc_feature complement(193814..194251)
/locus_tag="MA5_00815"
/note="putative outer membrane lipoprotein; Provisional;
Region: PRK09967"
/db_xref="CDD:182172"
misc_feature complement(193829..194122)
/locus_tag="MA5_00815"
/note="Peptidoglycan binding domains similar to the
C-terminal domain of outer-membrane protein OmpA; Region:
OmpA_C-like; cd07185"
/db_xref="CDD:143586"
misc_feature complement(order(193832..193834,193844..193846,
193970..193972,193979..193984,193994..193996,
194003..194008,194105..194110))
/locus_tag="MA5_00815"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:143586"
gene complement(194588..195541)
/locus_tag="MA5_00820"
/db_xref="GeneID:12007048"
CDS complement(194588..195541)
/locus_tag="MA5_00820"
/EC_number="2.3.1.180"
/note="COG0332 3-oxoacyl-[acyl-carrier-protein] synthase
III"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP synthase"
/protein_id="YP_005404433.1"
/db_xref="GI:383486753"
/db_xref="GeneID:12007048"
/translation="MTCKIIGSGGYLPPKIISNDELTKFVDTNDKWIRTRTGILQRHI
AGDAEYTSHLAFKSAQKAIEDAMISVDDIDLIITCTTTPDNSFPSVATKLHGYLGLTN
IPSFDLQAVCAGFIYGLQLAHSLIVSGKYKTILLIGAEKMTSLLDWNDRSTCVLFGDG
AGSVILQRSNDDSGLIDSNIFSSGTDYEILYTSGGTSMNGTSGKIVMQGQKLFRHAIE
KMLQSIEDLLYANQFSVSDIDYFIPHQANIRIINKLAELLNIEEHKVVKTVEKHANCS
AASIPLALSALKESGKIKKGDILLFSAIGAGLTWGGALIRW"
misc_feature complement(194591..195541)
/locus_tag="MA5_00820"
/note="3-oxoacyl-(acyl-carrier-protein) synthase III;
Region: fabH; TIGR00747"
/db_xref="CDD:233113"
misc_feature complement(194597..195532)
/locus_tag="MA5_00820"
/note="Ketoacyl-acyl carrier protein synthase III (KASIII)
initiates the elongation in type II fatty acid synthase
systems. It is found in bacteria and plants. Elongation of
fatty acids in the type II systems occurs by Claisen
condensation of malonyl-acyl...; Region: KAS_III; cd00830"
/db_xref="CDD:238426"
misc_feature complement(order(194621..194623,194969..194971,
194987..195004,195110..195112,195167..195172,
195179..195184,195191..195193,195215..195235,
195257..195259,195266..195268,195293..195295,
195299..195301))
/locus_tag="MA5_00820"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238426"
misc_feature complement(order(194720..194722,194810..194812,
195206..195208))
/locus_tag="MA5_00820"
/note="active site"
/db_xref="CDD:238426"
misc_feature complement(194801..194803)
/locus_tag="MA5_00820"
/note="CoA binding pocket [chemical binding]; other site"
/db_xref="CDD:238426"
gene complement(195555..195752)
/gene="rpmF"
/locus_tag="MA5_00825"
/db_xref="GeneID:12007049"
CDS complement(195555..195752)
/gene="rpmF"
/locus_tag="MA5_00825"
/note="COG0333 Ribosomal protein L32"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L32"
/protein_id="YP_005404434.1"
/db_xref="GI:383486754"
/db_xref="GeneID:12007049"
/translation="MAVPKKKTSKSKRNMRRSHLALGKINVIVDSHTGEYKLPHHISL
VDGTYNNRQVVTKKIDTEEVA"
misc_feature complement(195582..195752)
/gene="rpmF"
/locus_tag="MA5_00825"
/note="Ribosomal protein L32 [Translation, ribosomal
structure and biogenesis]; Region: RpmF; COG0333"
/db_xref="CDD:223410"
gene 195846..196307
/locus_tag="MA5_00830"
/db_xref="GeneID:12007050"
CDS 195846..196307
/locus_tag="MA5_00830"
/note="COG2913 Small protein A (tmRNA-binding)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404435.1"
/db_xref="GI:383486755"
/db_xref="GeneID:12007050"
/translation="MKTFITYIFSILVFFSLNSCKTIENRGTSIDDAELIKLESKKLN
KMEVVELIGTPTMVPEYSQNTWYYVERVMSQRAWLNPKIQKQKIIKITFDSNNLMKEL
IVIDDSHKEDIETVREYTKTHGTELNGLQKFVKNLGRFNNITHKNKNKKQR"
misc_feature 195846..196253
/locus_tag="MA5_00830"
/note="Outer membrane lipoprotein OmlA (small protein A)
[Cell envelope biogenesis, outer membrane]; Region: OlmA;
COG2913"
/db_xref="CDD:225465"
misc_feature 195924..196145
/locus_tag="MA5_00830"
/note="SmpA / OmlA family; Region: SmpA_OmlA; cl17115"
/db_xref="CDD:214276"
gene 196499..197410
/locus_tag="MA5_00835"
/db_xref="GeneID:12007051"
CDS 196499..197410
/locus_tag="MA5_00835"
/note="COG0552 Signal recognition particle GTPase"
/codon_start=1
/transl_table=11
/product="signal recognition particle-docking protein
FtsY"
/protein_id="YP_005404436.1"
/db_xref="GI:383486756"
/db_xref="GeneID:12007051"
/translation="MITIFNKLKQSLSKTSNTISAGIDKIFYKRKLDKETLNELEELL
ISSDISISVVTHIIEEFKNVKFDKTIDSDTVKEAIAKLIEQQLSKSEIPFTLSENKLN
IILVCGVNGVGKTTTIGKLSALYSAEGKKVAVAACDTFRAAAINQLSSWVHRANALLI
TGKASADPASVAYRAIEESIKQNIDILFIDTAGRLHNNKNLMDELSKIVKVIKKLDEN
APTHSILIIDAITGQNTYNQIEYFNDVTNLTGLIVTKLDGSAKAGVLVGAVQKFNLPV
YFIGIGEKIEDLKIFNRHDFSRSLVGL"
misc_feature 196502..197404
/locus_tag="MA5_00835"
/note="signal recognition particle-docking protein FtsY;
Provisional; Region: PRK10416"
/db_xref="CDD:236686"
misc_feature 196802..197338
/locus_tag="MA5_00835"
/note="The signal recognition particle (SRP) mediates the
transport to or across the plasma membrane in bacteria and
the endoplasmic reticulum in eukaryotes. SRP recognizes
N-terminal sighnal sequences of newly synthesized
polypeptides at the ribosome. The...; Region: SRP;
cd03115"
/db_xref="CDD:239389"
misc_feature 196820..196843
/locus_tag="MA5_00835"
/note="P loop; other site"
/db_xref="CDD:239389"
misc_feature order(196910..196912,197075..197077,197258..197260,
197267..197272)
/locus_tag="MA5_00835"
/note="GTP binding site [chemical binding]; other site"
/db_xref="CDD:239389"
gene 197564..200167
/locus_tag="MA5_00840"
/db_xref="GeneID:12007052"
CDS 197564..200167
/locus_tag="MA5_00840"
/note="COG0258 5'-3' exonuclease (including N-terminal
domain of PolI)"
/codon_start=1
/transl_table=11
/product="DNA polymerase I"
/protein_id="YP_005404437.1"
/db_xref="GI:383486757"
/db_xref="GeneID:12007052"
/translation="MTKKNTLLLIDGYGFVFRAYYAQKSLSSAKGEPVGALYGFTSML
LKLLSDFKPQYVAIVFDSGGKNFRHKIYQNYKANRPLPPKDLIAQLPLVRDVASNFKF
AILEKNGYEADDIIATFATKTVSLGEEVIIISSDKDLLQLMSKNIKIYDPIKCKYITE
DNVVTKFGTTPDKLREVMALIGDRSDNIPGVPSIGPKTASSLITKFGSVENIFNSLDQ
ISSIKQRKTLQNAREAALISWKLIGLDSNVDLDFDLNNLKWSPPNSKKLTGFLQEYGF
KSLYKRVENLFDIKINDHEEIVDNKVTEAKEISNASELANFAKEAERIGIFGIYLLQQ
KGENRALILSLQNQSYIIKITNNNYNIKNNNDWFSHIILNLLTNKSIKKITYSLKHLL
KFYANQSHQITAIEDLELMQYALSAGLVQKNLFTKTLTKDNIINESARIVINFISLYK
QTLLELQKNKAFRLYREIDLPTCFILDKMEKVGIKVDANYLNRLSDEFGTEILKIEEE
IFALSGTKFNIGSQKQLGEILFKKMQLPSGNTLAKTSSYSTRAGILKKLSEDGYHIAT
LLLRWRQLTKLKNTYTDSLPKQINNITKRIHTTFLQTSTTTGRLSSQEPNLQNVPIRS
SDGNKIREAFIAEEGYKLISADYSQIELRILSHIANIDVLKQAFINKEDIHTQTACQI
FNLKKHELTSEHRRKAKAINFGIIYGISAFGLAKQLNVSNSTASEYIKQYFAEYKGVQ
EYMTQTKACASRNGYVTNFFGRKCFIPLIHDKKLKQFAERAAINAPIQGTNADIIKIA
MIKLDKEIEERKLKTRLILQIHDELLFEVPEIEVEIVIPIIKKIMEHSTNMNVPIITE
IKAGNNWKEIH"
misc_feature 197582..200164
/locus_tag="MA5_00840"
/note="DNA polymerase I; Region: pola; TIGR00593"
/db_xref="CDD:233038"
misc_feature 197582..198055
/locus_tag="MA5_00840"
/note="PIN domain of the 5'-3' exonuclease of Taq DNA
polymerase I and homologs; Region: PIN_53EXO; cd09859"
/db_xref="CDD:189029"
misc_feature order(197594..197596,197744..197746,197894..197896,
197900..197905,197969..197971,197975..197977)
/locus_tag="MA5_00840"
/note="active site"
/db_xref="CDD:189029"
misc_feature order(197594..197596,197900..197902,197969..197971)
/locus_tag="MA5_00840"
/note="metal binding site 1 [ion binding]; metal-binding
site"
/db_xref="CDD:189029"
misc_feature 197762..197800
/locus_tag="MA5_00840"
/note="putative 5' ssDNA interaction site; other site"
/db_xref="CDD:189029"
misc_feature order(197894..197896,197903..197905)
/locus_tag="MA5_00840"
/note="metal binding site 3; metal-binding site"
/db_xref="CDD:189029"
misc_feature order(197969..197971,197975..197977)
/locus_tag="MA5_00840"
/note="metal binding site 2 [ion binding]; metal-binding
site"
/db_xref="CDD:189029"
misc_feature 198074..198295
/locus_tag="MA5_00840"
/note="H3TH domain of the 5'-3' exonuclease of Taq DNA
polymerase I and homologs; Region: H3TH_53EXO; cd09898"
/db_xref="CDD:188618"
misc_feature order(198104..198127,198131..198160,198164..198175)
/locus_tag="MA5_00840"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:188618"
misc_feature order(198110..198112,198119..198121)
/locus_tag="MA5_00840"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:188618"
misc_feature 199022..200152
/locus_tag="MA5_00840"
/note="Polymerase I functions primarily to fill DNA gaps
that arise during DNA repair, recombination and
replication; Region: DNA_pol_A_pol_I_C; cd08637"
/db_xref="CDD:176474"
misc_feature order(199277..199279,199289..199291,199298..199303,
199376..199384,199388..199390,199394..199405,
199499..199504,199586..199588,199646..199648,
199658..199660,199904..199906,199925..199927,
200018..200026)
/locus_tag="MA5_00840"
/note="active site"
/db_xref="CDD:176474"
misc_feature order(199277..199279,199289..199291,199298..199303,
199376..199384,199388..199390,199394..199405,
199682..199684,199901..199906,199913..199915,
199925..199927,200018..200026)
/locus_tag="MA5_00840"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:176474"
misc_feature order(199499..199504,199508..199510,199586..199588,
199646..199648,199658..199660,200024..200026)
/locus_tag="MA5_00840"
/note="catalytic site [active]"
/db_xref="CDD:176474"
gene 200445..201587
/locus_tag="MA5_00845"
/db_xref="GeneID:12007053"
CDS 200445..201587
/locus_tag="MA5_00845"
/EC_number="2.5.1.6"
/note="COG0192 S-adenosylmethionine synthetase"
/codon_start=1
/transl_table=11
/product="S-adenosylmethionine synthetase"
/protein_id="YP_005404438.1"
/db_xref="GI:383486758"
/db_xref="GeneID:12007053"
/translation="MKNFVFTSESVSEGHPDKIADQISDAVLDEILKHDPNGRVACET
FVTTGLVLVGGEITTNTYVDIEQVVRNKIQEIGYNNPNYGFDGSCCAVISSIIKQSPD
IAMGIDNENEEEIGAGDQGMVFGYACNETKSLMPAPIYYAHLLMKRQAYLRKQNILSW
LRPDAKSQVTLRYENNKPIVIDSVVLSTQHHPEIQQKDLIEAVIEEIIKPTLPTNLLH
KDTKYLINPTGRFVIGGPVADCGLTGRKIIVDSYGGMAKHGGGCFSGKDPTKIDRSAA
YMARYIAKNIVGAGLADRCEIQISYAIGVADPVSVYAETFGTSKLSNEQTTKLITEHF
DMRPGKIIKNLKLHTQCYQKTATYGHFGREDENFTWEQLDKVDIFK"
misc_feature 200448..201584
/locus_tag="MA5_00845"
/note="S-adenosylmethionine synthetase; Validated; Region:
PRK05250"
/db_xref="CDD:179974"
misc_feature 200448..200747
/locus_tag="MA5_00845"
/note="S-adenosylmethionine synthetase, N-terminal domain;
Region: S-AdoMet_synt_N; pfam00438"
/db_xref="CDD:201226"
misc_feature 200781..201137
/locus_tag="MA5_00845"
/note="S-adenosylmethionine synthetase, central domain;
Region: S-AdoMet_synt_M; pfam02772"
/db_xref="CDD:202384"
misc_feature 201141..201560
/locus_tag="MA5_00845"
/note="S-adenosylmethionine synthetase, C-terminal domain;
Region: S-AdoMet_synt_C; pfam02773"
/db_xref="CDD:111646"
misc_feature complement(201954..205503)
/note="potential frameshift: common BLAST hit:
gi|15604610|ref|NP_221128.1| DNA polymerase III subunit
alpha"
gene complement(205631..206935)
/locus_tag="MA5_00860"
/db_xref="GeneID:12007054"
CDS complement(205631..206935)
/locus_tag="MA5_00860"
/note="COG1004 Predicted UDP-glucose 6-dehydrogenase"
/codon_start=1
/transl_table=11
/product="UDP-glucose 6-dehydrogenase"
/protein_id="YP_005404439.1"
/db_xref="GI:383486759"
/db_xref="GeneID:12007054"
/translation="MNITFIGSGYVGLVSGIIMGYLGHNVTCLDNDDVKISKLNKKIL
PIYEAKLDEYLKHALESDRLKFTNIYSNEFRNFDAIFITVGTPSKELGEADLKYVYDA
VDKVSKHINKDCLIVIKSTVPPGSCNNIIAYLKAKGFSFNVASNPEFLREGSAVEDFL
YPDRIVVGVNNKESEALLRKIYAPLIEQGAKFLVTNLVTSELIKYVSNSFLATKIAFI
NEMADLCEKIGANIKDLSQGVGLDQRIGRNFLNAGPGFGGSCFPKDILALNNLVENHK
IDCKILKSVIKSNKLRPSNMVAKIATLLDGDLKGRNIAILGLTYKAGTDDVRASPAIE
IITILLNKDVYVKAFDPIGLENAKKNLEHKNLLYFASAVEACKSVDIIVIATEWSEFK
ELNWQEIYNLVKSPMIIDLRNILDNEVMKKIGFRYYAVGSQI"
misc_feature complement(205682..206935)
/locus_tag="MA5_00860"
/note="Predicted UDP-glucose 6-dehydrogenase [Cell
envelope biogenesis, outer membrane]; Region: Ugd;
COG1004"
/db_xref="CDD:223936"
misc_feature complement(206060..206347)
/locus_tag="MA5_00860"
/note="UDP-glucose/GDP-mannose dehydrogenase family,
central domain; Region: UDPG_MGDP_dh; pfam00984"
/db_xref="CDD:201536"
misc_feature complement(205688..205996)
/locus_tag="MA5_00860"
/note="UDP-glucose/GDP-mannose dehydrogenase family, UDP
binding domain; Region: UDPG_MGDP_dh_C; pfam03720"
/db_xref="CDD:217691"
gene 207179..209686
/locus_tag="MA5_00865"
/db_xref="GeneID:12007055"
CDS 207179..209686
/locus_tag="MA5_00865"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404440.1"
/db_xref="GI:383486760"
/db_xref="GeneID:12007055"
/translation="MNFFKKTFVSIFIILIALSFAIALTMYSVNKGHLNAPLKKIIEF
YLSKNDIKAVLYNLEFKENRLSIEYISLSLIDNARGEIKDFNLFLNFKNFFSNSLIEA
NFNIDKISLISNNNEEIINTSTTGHYSLNIIKKDSLTDIRLTSIKSDILTDEQGANLP
LGNALCSYKISHSKGHPKTVNCKLTFGDKAYLLLNGIITDKSIDTSAAAANMPLIIYQ
TVEKIIPDNPIVAYLREHIKQGFIQNGELNIKLDKKLFKKNILVEDNLKANLHISNFE
YKYHKDLPPLTKIDTNIIISGREIKFLINEAYSGKSLISDGIMTFKWEGPDKSQFIFN
ATAKGEINDLIAFVPSDTYKKIKAQNIDLSKIKGTANSIIELIIPISPDVPNRYNVLS
TLTNISFNTLDNKVLLQNGEAKGSLKDNKLNISGKGNINNYESSFIYDHDISDKHNEC
LLKIKSNITANNQRFGVLKLISGTTILNFEYKKQHNNESFITVHSNLDNLEFYIDKVS
IHKKLYKRANLYLYTKLNDTDRNIEFNLSGHDNLKIHGNVLIKENIYNINLASVKHNY
TDLKGKIIIDNHNLNTELYGSGLDLSNANMMQFLEKEGDSTHNINLKTNISKIILKNN
IILTNLDLVIKCDKVRCFYGFLNANIENKKVKMSLTAKDTFEQWLIESDNAGALLNGL
GMYTTMQNGQIHIKLNTKRYEVKKGEIVPILDGKFSIKHFKVVDTPFLTRLVSFVSLP
GFLSSITNNKNILFDDMTGKFNYRGNIITIFDTEAHGPFFDFTMKGNIDTKQQFITVT
GNVIPSFFLISTIVTKIPVVGKIFSKVALYSLKMHYK"
misc_feature 207863..208648
/locus_tag="MA5_00865"
/note="Protein of unknown function; Region: DUF3971;
pfam13116"
/db_xref="CDD:205297"
misc_feature <209186..209683
/locus_tag="MA5_00865"
/note="AsmA-like C-terminal region; Region: AsmA_2;
pfam13502"
/db_xref="CDD:205680"
gene 209696..210961
/locus_tag="MA5_00870"
/db_xref="GeneID:12007056"
CDS 209696..210961
/locus_tag="MA5_00870"
/note="COG0477 Permeases of the major facilitator
superfamily"
/codon_start=1
/transl_table=11
/product="muropeptide permease AmpG"
/protein_id="YP_005404441.1"
/db_xref="GI:383486761"
/db_xref="GeneID:12007056"
/translation="MYKKLYLIGILLLGLISGLTFNLIFFTVPYQLSEAKYTTDIIGA
ISLAAFPYCLKVIWSPFIDKYSIPFLGVKLGHRRSWALVSQIFLILAMMWFLKRSPCN
NLCITAIILFIIAFFSSTQDIVLDAYRIERTTSKEELSIVFTFSSIGFRLGMLLGSVG
SLYSSIIFGWNTVYKFALFITMVGPIVILCIKEPKLKTKRHTTNTLIDLQQYFEVIKK
SIISFKNEQQYLLLIILFVFLYKAADSIPMAMSIPLFLDLSFTTHEIAVIYKAYGLLI
MIVGGTLGGILAAKIGIFHSVLIGGVIQLLSPLMFMILATIGYDIKTFIITITIQNFC
SGFAGTIISIYFASLCNSEFVATQYAISASFSSLSRIILASLGGICAKHLTWSVFFLC
NTLFSMLFIPIFYTIYRKKLHFMNHSKKI"
misc_feature 209762..210799
/locus_tag="MA5_00870"
/note="muropeptide transporter; Validated; Region: ampG;
cl17669"
/db_xref="CDD:248223"
misc_feature <210518..210919
/locus_tag="MA5_00870"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene 211137..211892
/locus_tag="MA5_00875"
/db_xref="GeneID:12007057"
CDS 211137..211892
/locus_tag="MA5_00875"
/note="COG0805 Sec-independent protein secretion pathway
component TatC"
/codon_start=1
/transl_table=11
/product="Sec-independent protein translocase protein
TatC"
/protein_id="YP_005404442.1"
/db_xref="GI:383486762"
/db_xref="GeneID:12007057"
/translation="MKLYSFQEHLLEFKIRLLRIFTAFIIIFAICYYFSDYIYSFLLE
PLAKLSGDTVRNIIYTGLTEAFFTYIKLSAFTAFTIIIPIIALECYLFISPGLYRHEK
KIIAFILFMSPILFWCGSIFVFYFVMPKAWNFFLSFEKRDMIVPIILEARISEYLNLV
IHLIIAFGIAFQLPIVIIVLNILKIVKTQTLKKKRRIAVVINFIIAGILTPPDILSQF
ALAIPLLLLYETSIIICNFIETPRTLNVKYQMD"
misc_feature 211137..211889
/locus_tag="MA5_00875"
/note="Sec-independent protein secretion pathway component
TatC [Intracellular trafficking and secretion]; Region:
TatC; COG0805"
/db_xref="CDD:223876"
gene 211870..213147
/locus_tag="MA5_00880"
/db_xref="GeneID:12007058"
CDS 211870..213147
/locus_tag="MA5_00880"
/EC_number="6.1.1.11"
/note="COG0172 Seryl-tRNA synthetase"
/codon_start=1
/transl_table=11
/product="seryl-tRNA synthetase"
/protein_id="YP_005404443.1"
/db_xref="GI:383486763"
/db_xref="GeneID:12007058"
/translation="MLNIKWIRENQELFDEKLSQRFIEPMSSKIAMLDQEKRKITSLI
QEFQHARKVKSKILGNMVSKSGEEFEELQRDVNHINEKLAELEQNLDNNNELNELLNM
LPNIPDEEVPYGIDGSMNKLVRAYGKTNKNALNKQHFELGTKLNLMDFEQTAKISGSR
FVTLKGDLAKLERALINFMIDIHTKEFDFFEISPPFLVRDRAMYNAGQLPKFSEESFI
TTNGYRLIPTAEVSLVNIVADTIIQREKLPMRYVAYTTCFRSEAGSSGRDTRGMIRLH
QFGKVELVSITTPEESKNEHEYITNASETILKKLDLPYRVMLLCTGDMGFAAKKTYDI
EVWLPGQNQYREIASCSNCGDFQARRMKARYKEFGSNETTLVHTLNASGLPIGRTIVA
ILENYQNNDGSITIPDVLINYMGGLQKITTYSE"
misc_feature 211870..213132
/locus_tag="MA5_00880"
/note="seryl-tRNA synthetase; Provisional; Region:
PRK05431"
/db_xref="CDD:235461"
misc_feature 211870..>212115
/locus_tag="MA5_00880"
/note="Seryl-tRNA synthetase N-terminal domain; Region:
Seryl_tRNA_N; pfam02403"
/db_xref="CDD:217020"
misc_feature 212227..213111
/locus_tag="MA5_00880"
/note="Seryl-tRNA synthetase (SerRS) class II core
catalytic domain. SerRS is responsible for the attachment
of serine to the 3' OH group of ribose of the appropriate
tRNA. This domain It is primarily responsible for
ATP-dependent formation of the enzyme...; Region:
SerRS_core; cd00770"
/db_xref="CDD:238393"
misc_feature order(212323..212340,212347..212367,212377..212379,
212383..212385,212389..212391,212398..212400,
212437..212448,212452..212460,212464..212466,
212518..212520,212524..212526,212536..212538,
212563..212565,212575..212577,212587..212589,
212635..212637,212698..212700,213106..213111)
/locus_tag="MA5_00880"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238393"
misc_feature order(212344..212346,212551..212553,212557..212559,
212644..212646,212650..212652,212668..212670,
212677..212679,212686..212688,212692..212694,
212701..212703,212707..212709,212713..212715,
212905..212916,213007..213009,213013..213015,
213031..213033)
/locus_tag="MA5_00880"
/note="active site"
/db_xref="CDD:238393"
misc_feature 212437..212460
/locus_tag="MA5_00880"
/note="motif 1; other site"
/db_xref="CDD:238393"
misc_feature 212641..212652
/locus_tag="MA5_00880"
/note="motif 2; other site"
/db_xref="CDD:238393"
misc_feature order(213016..213024,213031..213033)
/locus_tag="MA5_00880"
/note="motif 3; other site"
/db_xref="CDD:238393"
gene 213402..215834
/locus_tag="MA5_00885"
/db_xref="GeneID:12007059"
CDS 213402..215834
/locus_tag="MA5_00885"
/note="COG3451 Type IV secretory pathway, VirB4
components"
/codon_start=1
/transl_table=11
/product="VIRB4 protein precursor (virB4)"
/protein_id="YP_005404444.1"
/db_xref="GI:383486764"
/db_xref="GeneID:12007059"
/translation="MFSDLRKFDKDIYNYNAPNFIPIACHYNENTLLTKDGKLLQIVK
IHGINSEKISDNIQNLREMVRLAIKKHVTDYDFAFWLHTIREKQNLDDITPYKKLLPA
NIHTLWQRKNHWNDKFVNTLYISIVHDSAKIQIKNFSSLINSLSYKLIANFEKNYLDS
AFKKLENITNNILNDLNEFGAEKLGIIFENDNVFSNTLFLYNRIANLNDNDCLVPIID
LSDALGRSIYTISGDKIIVTDHAKNNKFVSLLSIKEYQETPSNTLDKFLQLPIELIIT
EIFYFVSKKQIISKLHGQDHILKITNDSILLNYKGINKLDETNLDFQFCNQQISIAVI
EEDESKLAKAVAKASTELFKLGIIHVKEDINIEQIFWSQLPANFSFIRRISPLSVEHI
ASFTALHNTTLGNQYNPWGRAITLLRTEKGTPYFMNFHDKTNKGNTCIFGTEKTGKTV
LLNFLISESTKYDPTIIYISNNNDSQIFIEAIEGKWLEPEKQIINPFLVDDTEQSQAF
ILEFLKLISGHYISQLSEIEISFLEKFKDKILSIEKEKRIFSNILKLENFKEEGGIQI
FDKLKVFTEGQLYYGLFDGPSLSIKEGEVIGFNLYTLSDEPFSKQFYPMERKFLEQFN
HNLKKHQSISAAVIYALSYHLSLLGTKPKIFAADNFDQLYRPESYYDNINLIYNNLSE
NNGIFVSNFNFIYLKSYPKYTIKPWLDLINTKIILPSDVKIEDLDKILGLNELEIRKL
SQLMLAARMFLINKDNESIASELSIAALIGIVRILSSRQEEMDIYKKILQEHAGPPDN
WINYLYNALNIY"
misc_feature 213429..215822
/locus_tag="MA5_00885"
/note="type IV secretion/conjugal transfer ATPase, VirB4
family; Region: VirB4_CagE; TIGR00929"
/db_xref="CDD:233193"
misc_feature 213945..214550
/locus_tag="MA5_00885"
/note="CagE, TrbE, VirB family, component of type IV
transporter system; Region: CagE_TrbE_VirB; pfam03135"
/db_xref="CDD:217382"
gene complement(216921..217106)
/locus_tag="MA5_00890"
/db_xref="GeneID:12007060"
CDS complement(216921..217106)
/locus_tag="MA5_00890"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404445.1"
/db_xref="GI:383486765"
/db_xref="GeneID:12007060"
/translation="MLLTILFLTLILEGTTQEGLVEDWSNMPLAFFMLHTLLTLGLML
IAFKFGQYGGGNGPKGN"
gene 219461..220354
/locus_tag="MA5_00895"
/db_xref="GeneID:12007061"
CDS 219461..220354
/locus_tag="MA5_00895"
/note="COG0861 Membrane protein TerC, possibly involved in
tellurium resistance"
/codon_start=1
/transl_table=11
/product="tellurium resistance protein TerC"
/protein_id="YP_005404446.1"
/db_xref="GI:383486766"
/db_xref="GeneID:12007061"
/translation="MSWIIFYTIIAALLILDLGIIHKKNKVISFKGSILLSLFYFIIS
CLFGIYVYHNMGLDHAREYYTCFLIEKAMALDNIFIISIIFQFFNIPSTYQHRVLFFG
IIGVIIFKAIIIYGGIMLIHKFSWLLYILAVILIATGIKTFNVSHKTYDIQNSYIYKS
IIKNLNITHDLEGQKFVIKRNNKLYFSTLFVSLILIETIDLVFAIDSIAAIFAITNDV
YIIYTSNIFAILGLRSLFFCLSEIVERFSYIKYSLALILIFIGFKIFIHHYIEIPAYI
SLTVTISSLLFGIIASILEKI"
misc_feature 219467..220342
/locus_tag="MA5_00895"
/note="Integral membrane protein TerC family; Region:
TerC; cl10468"
/db_xref="CDD:245307"
gene 220410..221123
/locus_tag="MA5_00900"
/db_xref="GeneID:12007062"
CDS 220410..221123
/locus_tag="MA5_00900"
/note="COG3637 Opacity protein and related surface
antigens"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404447.1"
/db_xref="GI:383486767"
/db_xref="GeneID:12007062"
/translation="MNKLLKLFFITIIIYNNIAFAKETGFYMGAAIGIVEPVVRKFRH
KYSNTGIILKQSNMYSGKIGYIIYPQISMEFSATYQPKYRLHYSLQHKNLINGLTIPK
TIGNTTIVSNIYMLNLIYDLEKIKTFTPFIILGGGITRVKVKSTSSKWSLINNDYFKV
HRTSKNCVTWQAGLGIAQHITPDLSIDATAKLQTAYRVRINYDTLDMKTVQLMNANSI
KKTISVGEFGIGFTYRLPF"
misc_feature 220464..221111
/locus_tag="MA5_00900"
/note="Outer membrane protein beta-barrel domain; Region:
OMP_b-brl; pfam13505"
/db_xref="CDD:205683"
gene 221211..222872
/locus_tag="MA5_00905"
/db_xref="GeneID:12007063"
CDS 221211..222872
/locus_tag="MA5_00905"
/note="COG0500 SAM-dependent methyltransferases"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404448.1"
/db_xref="GI:383486768"
/db_xref="GeneID:12007063"
/translation="MSLKSTTSSLTTNNHDKTINSVQSLVNGTGTVADHNPYDEVPYE
SYPYAITNPYHLSTLATLFGINAPEVENSKILELGCAAGGNLIPHAVLYPNAHFVGVD
LSKVQIDEANKNVRALGLKNIEFHHCSITDIDDSFGKFDYIICHGVISWVPKIVRDKI
FKVCNRNLSTNGIAYISYNTLPGWNMVRTIRDMMLYHSSSFTNIRDRIAQSRLLLEFV
KDSLEHSKTPYAEVLKTEAGLLAKQTDHYLRHDHLEEENAQFYFHEFMNEARKHNLQY
LADCNISTMYLGNMPPKVVEQLKAVNDIVRTEQYMDFITNRRFRTTLLCHNDLKINRN
INNDDIKKFNIIFNVIPEKPLKEVDLNNATENLQFFLNGNKESNLSTTSPYMKAILYT
FSENLNNPLSFKQVTSEANKKLNNTKLNEIKNELLNNAMKLVLQGYISITNQKHRSKP
VLDKPKTTQMVIYQAKYTPSMWVTNLKHEPIGVNFFEKFALRYMDGRNDKKAIIEAIL
GHVEKGELTLSREGQKIENKEEIRKELESLFTPMIEKFCSNALLV"
misc_feature 221421..>221744
/locus_tag="MA5_00905"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:206018"
misc_feature 221430..221744
/locus_tag="MA5_00905"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(221442..221462,221514..221519,221592..221600,
221646..221648)
/locus_tag="MA5_00905"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
misc_feature 222045..222863
/locus_tag="MA5_00905"
/note="Predicted regulatory domain of a methyltransferase
[General function prediction only]; Region: COG4797"
/db_xref="CDD:34406"
gene 222945..223562
/locus_tag="MA5_00910"
/db_xref="GeneID:12007064"
CDS 222945..223562
/locus_tag="MA5_00910"
/EC_number="1.6.99.5"
/note="COG0839 NADH:ubiquinone oxidoreductase subunit 6
(chain J)"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit J"
/protein_id="YP_005404449.1"
/db_xref="GI:383486769"
/db_xref="GeneID:12007064"
/translation="MPIFFYLFTTLIIISSLCVVLSKNSVYSVLWLIFTFINGSGLMI
LLGAEFLAMLLIVIYVGAVAVLFLFVIMMLDINFNQAITKLRENLSLSIFITLIMFAD
LVITIILSTKNINYSSNISFAIANNISNTKAIGNVLYTEFMLPFQIAGLILFVAMISC
ITLTLKKRDRIKHQDIRKQLSHNKSNVILMTKPILNKGVENIKYE"
misc_feature 222987..223535
/locus_tag="MA5_00910"
/note="NADH:ubiquinone oxidoreductase subunit J;
Provisional; Region: PRK06638"
/db_xref="CDD:235844"
misc_feature 223008..>223166
/locus_tag="MA5_00910"
/note="NADH dehydrogenase subunit 6; Provisional; Region:
ND6; MTH00213"
/db_xref="CDD:177256"
gene 223555..223869
/locus_tag="MA5_00915"
/db_xref="GeneID:12007065"
CDS 223555..223869
/locus_tag="MA5_00915"
/EC_number="1.6.99.5"
/note="COG0713 NADH:ubiquinone oxidoreductase subunit 11
or 4L (chain K)"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit K"
/protein_id="YP_005404450.1"
/db_xref="GI:383486770"
/db_xref="GeneID:12007065"
/translation="MNEYISLNHYLILSSLVFTIGMFGLFMNRKNIINILMSIELMLL
AVNINFVAFSVYMQELSGQIFSIIILTVAAAETAIGLAILLIYFRNKGSIKITDINKM
RG"
misc_feature 223567..223866
/locus_tag="MA5_00915"
/note="NADH:ubiquinone oxidoreductase subunit K;
Validated; Region: PRK05715"
/db_xref="CDD:180218"
gene 223869..225830
/locus_tag="MA5_00920"
/db_xref="GeneID:12007066"
CDS 223869..225830
/locus_tag="MA5_00920"
/note="COG1009 NADH:ubiquinone oxidoreductase subunit 5
(chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit L"
/protein_id="YP_005404451.1"
/db_xref="GI:383486771"
/db_xref="GeneID:12007066"
/translation="MIHQNLAIMIIILPLVSSIINGLFLNIIDKKLAKIIAISFLSLS
ALFSLVIFCDVTLVGKIIHIKLLPWIEFKNLQVNWSIYIDQLTSIMFIAVTFVSSVVH
IYSLGYMAEDKGIIRFLSFLSLFTFFMLMLVSADNFLQLFCGWEGVGVCSYLLIGFWH
SKESANKAAIKAFITNRVSDFAFILGIITIIVYYGSANYKDVFSSAKLLSNTKIFVHF
SILDIICLLLFIGCMGKSAQIGLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVARCS
YLFEYSPIVLQFITIIGGITCLFAASIAIMQSDIKKIIAYSTCSQLGYMFMACGVSSY
NSAIFHLVTHAFFKALLFLSAGNVIHAVNEHNIFKMGGLINKMPITYGNFLIGSLALI
GIYPLSGFYSKDLILEATYSSGSFMFIFGIITAILTAIYSMKIIILVFHGKTKLEKDV
FKHAHEPTKIMNNPLILLVAGSFFSGMIGYYLLSMDKPNGYFHESLFNLHIYKLLINH
HPLYIKLLPMAVGIVGIIIGICLYKGSLSYQTLTNESDQREKDWIPKSKCKMILVFIS
NVLRNKYYFDEIYNHLIIKPIHCLTYLFYFGDQKIIDRFGPNGFARVINYFCAVTCKI
QTGYIFNYTLYIVSFIVVTISYFVLKNIY"
misc_feature 223875..225827
/locus_tag="MA5_00920"
/note="NADH:ubiquinone oxidoreductase subunit L; Reviewed;
Region: PRK06590"
/db_xref="CDD:235836"
misc_feature 224055..224219
/locus_tag="MA5_00920"
/note="NADH-Ubiquinone oxidoreductase (complex I), chain 5
N-terminus; Region: Oxidored_q1_N; pfam00662"
/db_xref="CDD:109709"
misc_feature 224271..225095
/locus_tag="MA5_00920"
/note="NADH-Ubiquinone/plastoquinone (complex I), various
chains; Region: Oxidored_q1; pfam00361"
/db_xref="CDD:201180"
gene 225980..227455
/locus_tag="MA5_00925"
/db_xref="GeneID:12007067"
CDS 225980..227455
/locus_tag="MA5_00925"
/EC_number="1.6.99.5"
/note="COG1008 NADH:ubiquinone oxidoreductase subunit 4
(chain M)"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit M"
/protein_id="YP_005404452.1"
/db_xref="GI:383486772"
/db_xref="GeneID:12007067"
/translation="MLELPIISITIFLPLISVLYILLFFNQNKKADKLSIYVAMLSSV
LTFISTIYILIEFDVSNNTYQFVERYTWLDKIGLEFHVGVDGIAIFFVVLTSFLTLIC
IIGSLFTIKKYIKEYLVCFLLMESLCIGAFTSINLLLFYLFFEAILVPMYIIIGVWGG
DNRIYAALKFFLYTFFGSVFFLLALIYIYSKIHSFDLTNILELIGNIPLFAQKILWWA
IFIAFAIKTPMIPFHTWLPDAHVQAPTTGSVILAGILLKLGGYGFLRVLLPLFPNASQ
EFAIYVIYLSVIAIIYASLVALAQKDIKQMIAYSSIAHMGYVTIGIFSFTEIGISGAI
FQMLSHGIISSSLFLIVGTLYERLHTKEIAKYGGVANKMPILATFFMIAMLSSIGLPS
TSGFIGEFLSLLGIYKVNVVTAFIAALGIILGAVYMLKLYKEVMLGEITNTEIKHFRD
LYKYEIISIAPLILLIIYFGLMPNSILNVFHLSVENLLIKF"
misc_feature 225992..227452
/locus_tag="MA5_00925"
/note="NADH:ubiquinone oxidoreductase subunit M; Reviewed;
Region: PRK05846"
/db_xref="CDD:235622"
misc_feature 226379..227194
/locus_tag="MA5_00925"
/note="NADH-Ubiquinone/plastoquinone (complex I), various
chains; Region: Oxidored_q1; pfam00361"
/db_xref="CDD:201180"
gene 227818..228405
/locus_tag="MA5_00930"
/db_xref="GeneID:12007068"
CDS 227818..228405
/locus_tag="MA5_00930"
/note="COG4133 ABC-type transport system involved in
cytochrome c biogenesis, ATPase component"
/codon_start=1
/transl_table=11
/product="cytochrome c biogenesis protein CcmA"
/protein_id="YP_005404453.1"
/db_xref="GI:383486773"
/db_xref="GeneID:12007068"
/translation="MLSLNQLQLNIEKRNLFDLCITFLPSAITYIKGANGSGKSSLLR
MIAGIMQPSSGNIYYKNSHINNCIKPYCTYIGHNLGLKLEMTVFENLKFWSEIYNSTE
TVPAAIHYFKLDYLLDEKCYNLSSGIQKIVAIARLIVCQSDLWLLDEVESNLSKENKD
LLNNLIVMKANSGGIILLSSHQENVIKSAQILQLK"
misc_feature 227818..228402
/locus_tag="MA5_00930"
/note="cytochrome c biogenesis protein CcmA; Provisional;
Region: PRK13541"
/db_xref="CDD:184128"
misc_feature 227908..228363
/locus_tag="MA5_00930"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 227914..227937
/locus_tag="MA5_00930"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(227923..227928,227932..227940,228046..228048,
228259..228264,228358..228360)
/locus_tag="MA5_00930"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 228037..228048
/locus_tag="MA5_00930"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature 228187..228216
/locus_tag="MA5_00930"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 228247..228264
/locus_tag="MA5_00930"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 228271..228282
/locus_tag="MA5_00930"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 228346..228363
/locus_tag="MA5_00930"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene complement(229799..230278)
/locus_tag="MA5_00935"
/db_xref="GeneID:12007069"
CDS complement(229799..230278)
/locus_tag="MA5_00935"
/EC_number="1.6.99.5"
/note="COG1143 Formate hydrogenlyase subunit
6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase subunit I"
/protein_id="YP_005404454.1"
/db_xref="GI:383486774"
/db_xref="GeneID:12007069"
/translation="MINYLKSFFLYEIIRGMTLTLKYFFKPKVTINYPYEKSPVSPRF
KGEHALRRYENGEERCIACKLCEAICPAHAIVIESDERDDGSRRTTRYDIDMTKCIYC
GLCQEACPVDAIVEGPNFEFASLTHTALIYDKERLLNNGDKWEQALANKLHKDYQYR"
misc_feature complement(229802..230278)
/locus_tag="MA5_00935"
/note="NADH dehydrogenase subunit I; Provisional; Region:
PRK05888"
/db_xref="CDD:180305"
misc_feature complement(230054..230110)
/locus_tag="MA5_00935"
/note="4Fe-4S binding domain; Region: Fer4; cl02805"
/db_xref="CDD:207738"
misc_feature complement(229937..230005)
/locus_tag="MA5_00935"
/note="4Fe-4S binding domain; Region: Fer4; pfam00037"
/db_xref="CDD:200947"
gene complement(230284..231303)
/locus_tag="MA5_00940"
/db_xref="GeneID:12007070"
CDS complement(230284..231303)
/locus_tag="MA5_00940"
/EC_number="1.6.99.5"
/note="COG1005 NADH:ubiquinone oxidoreductase subunit 1
(chain H)"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit H"
/protein_id="YP_005404455.1"
/db_xref="GI:383486775"
/db_xref="GeneID:12007070"
/translation="MIEYFCEYMFPLTVIALKVVAITIPLILCVAYLTYAERRVIGLM
QLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTDADKILFILAPIITFVLSLIGWAVI
PFSSGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVS
MGLVIITVLLTTGTLNLSGIIEAQKTLPWWIDLMLLPMSIVFFISVLAETNRLPFDLP
EAESELVAGYNVEYSSMGFALFFLGEYANMILVSAMTTTLFLGGYLPPFNLSFLDCIP
GFFWFVFKVGFLLFCFLWIRATLPRYRYDQLMRLGWKVFLPFTLFGVVLVSSVLFYTD
NLPSV"
misc_feature complement(230341..231273)
/locus_tag="MA5_00940"
/note="NADH:ubiquinone oxidoreductase subunit H;
Provisional; Region: PRK06076"
/db_xref="CDD:180386"
gene complement(231447..233474)
/locus_tag="MA5_00945"
/db_xref="GeneID:12007071"
CDS complement(231447..233474)
/locus_tag="MA5_00945"
/EC_number="1.6.99.5"
/note="COG1034 NADH dehydrogenase/NADH:ubiquinone
oxidoreductase 75 kD subunit (chain G)"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase subunit G"
/protein_id="YP_005404456.1"
/db_xref="GI:383486776"
/db_xref="GeneID:12007071"
/translation="MIKLIIDGSEIEISEGSTVYQACIQAGKEIPHFCYHARLKIAGN
CRMCLVEIEKSQKPVASCAMPVSKGMVIHTDTPMVKKAREGVMEFLLINHPLDCPICD
QGGECDLQDQAFRYGKGTNRFHENKRSIKDKYMGPLIKTAMTRCIQCTRCIRLANDIA
GIEEIGAINRGEHMEVTSYLEQTLDSEISGNMIDICPVGALNSKPYAFKARKWELKHT
ASIGVHDAEGSNIRIDSRADEIMRILPRVNEAINEEWLSDKNRFCYDGLKYQRLDHPY
IRKNGKLVEVSWSEAFKTIMDKIKSVKPEKIAAIAGSIVSVEAMFMLKILLQKLGSNN
YTVNQFNYKIDTSERGNYLFNTTIVGVEKADLCLLIGANTRQIAPILNSRIGRRVRIG
ALKVVRIGIGHNQTYKIQDLGNDIKIIEDLAIGTHEYTKAFKEAKYPMIIVGDGVYGR
DDGYAVLSLIHKVVDKYNMMRDDWQGFNILHNHASIVGGLDIGFNTTIKFEGIKLAYL
LGADAIPFDKLKSAFIIYQGHHGDVGAMSADVILPAAAYTEQSGIYVNLEGRPQIAQK
AVSTVGGAKEDIEIIKEIAGYLKIDIGMDNLQEVRIRLAKEYNVFANIDKITENKFTK
FISIDKLSKDPIAARPINYYMTDVISKNSVTMAKCVEAHEERKRDVAKVFY"
misc_feature complement(231459..233474)
/locus_tag="MA5_00945"
/note="NADH dehydrogenase subunit G; Validated; Region:
PRK09130"
/db_xref="CDD:181665"
misc_feature complement(233256..>233423)
/locus_tag="MA5_00945"
/note="2Fe-2S iron-sulfur cluster binding domain.
Iron-sulfur proteins play an important role in electron
transfer processes and in various enzymatic reactions. The
family includes plant and algal ferredoxins, which act as
electron carriers in photosynthesis...; Region: fer2;
cd00207"
/db_xref="CDD:29262"
misc_feature complement(order(233289..233294,233331..233342,
233346..233348,233373..233375,233382..233387))
/locus_tag="MA5_00945"
/note="catalytic loop [active]"
/db_xref="CDD:29262"
misc_feature complement(order(233289..233291,233331..233333,
233340..233342,233373..233375))
/locus_tag="MA5_00945"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:29262"
misc_feature complement(233106..233228)
/locus_tag="MA5_00945"
/note="NADH-ubiquinone oxidoreductase-G iron-sulfur
binding region; Region: NADH-G_4Fe-4S_3; pfam10588"
/db_xref="CDD:204520"
misc_feature complement(231762..232817)
/locus_tag="MA5_00945"
/note="MopB_Res_Cmplx1_Nad11: The second domain of the
Nad11/75-kDa subunit of the NADH-quinone
oxidoreductase/respiratory complex I/NADH
dehydrogenase-1(NDH-1) of eukaryotes and the Nqo3/G
subunit of alphaproteobacteria NDH-1. The NADH-quinone
oxidoreductase...; Region: MopB_Res-Cmplx1_Nad11; cd02773"
/db_xref="CDD:29469"
misc_feature complement(231498..231632)
/locus_tag="MA5_00945"
/note="Domain of unknown function (DUF1982); Region:
DUF1982; pfam09326"
/db_xref="CDD:204199"
gene complement(233477..233833)
/locus_tag="MA5_00950"
/db_xref="GeneID:12007072"
CDS complement(233477..233833)
/locus_tag="MA5_00950"
/note="COG3671 Predicted membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404457.1"
/db_xref="GI:383486777"
/db_xref="GeneID:12007072"
/translation="MDKHLKEYTESGKKNLIVVYILYLCGVVAPILPLVGVFFAYLHK
DKGDSFAVSHYVFLFRTFCLVVLGWIICFIFTFIIVGVVLYFALAVWYILRVAIGFKY
MIEDQAYPNPITYWIK"
misc_feature complement(233480..233833)
/locus_tag="MA5_00950"
/note="Predicted membrane protein [Function unknown];
Region: COG3671"
/db_xref="CDD:226197"
gene complement(234007..236643)
/locus_tag="MA5_00955"
/db_xref="GeneID:12007073"
CDS complement(234007..236643)
/locus_tag="MA5_00955"
/EC_number="4.2.1.3"
/note="COG1048 Aconitase A"
/codon_start=1
/transl_table=11
/product="aconitate hydratase"
/protein_id="YP_005404458.1"
/db_xref="GI:383486778"
/db_xref="GeneID:12007073"
/translation="MSKVHNSEYIKELVVDNTSYKIYDINKAASDIGLPLKKLPYSLR
VLLENVLRTNGNKENLLVFKEWLKTKKSNTEIDFMPARVLMQDFTGVPAIVDLAAMRD
AMQKIGCNPLKINPLIPVDLVIDHSVSVDSYGNKESFDQNVHMEMKRNIERYQFLKWG
QQAFNNFKVVPPGTGICHQVNLEFLSQVVWHNDGTAYPDSLVGTDSHTTMVNGLSVLG
WGVGGIEAESAMLGQPITMIIPEVIGVKLIGKLAGMATATDLVLTITEILRRKKVVGK
FVEFFGNGLRNLTISDRATISNMSPEYGATCGFFPIDQETLKYLEVTGREITQIKLVE
KYAIEQNLWYNCEDTQEYTEVLELDLSTVYSSLAGPKRPQDRVNLNCVASNFQNELPY
FALANKDIDKKYAVANQNYAIGNGDVVIAAITSCTNTSNPSVMIGAALLAKKALEHGL
NVKPWVKTSLAPGSKVVTEYLKLSGLDKYLDALGFNLVGYGCTTCIGNSGSLNPEIEN
TINKNRLVVASVLSGNRNFEGRINPLTKASYLASPILVVAYALSGTLNIDLTNTPIGA
NIYLKDIWPSQKEIDEVIANSINSSMFIEKYADVFNGTKEWRDLQITTGTNYNWDKNS
TYINNPPYFDNIGSEHSIKDIKSARILAIFGDSITTDHISPAGSISKNSPAAKYLIKH
HIEPLDFNSYGSRRGNHEVMMRGTFANIRIKNEMCNGVEGGFTINQLSGVQQTIYDTA
MDYKAHDIPLVIFAGKEYGSGSSRDWAAKGPGLLGIKAVIAESFERIHRSNLVGMGIL
PLTFTGKNTRLNLKLDGSEIIDLIGLSENIKPYNLVKCVIKKQTNEISTIDLILQIFT
ENEINYIKHGSIMQFVVESLKG"
misc_feature complement(234016..236643)
/locus_tag="MA5_00955"
/note="aconitate hydratase; Validated; Region: PRK09277"
/db_xref="CDD:236445"
misc_feature complement(234982..236400)
/locus_tag="MA5_00955"
/note="Aconitase A catalytic domain; Region: AcnA_IRP;
cd01586"
/db_xref="CDD:153136"
misc_feature complement(order(235054..235056,235069..235071,
235156..235158,236026..236031,236377..236379,
236386..236388))
/locus_tag="MA5_00955"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:153136"
misc_feature complement(order(235072..235074,235156..235161,
235168..235170,235366..235368,236023..236025))
/locus_tag="MA5_00955"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:153136"
misc_feature complement(234175..234687)
/locus_tag="MA5_00955"
/note="Aconitase A swivel domain. This is the major form
of the TCA cycle enzyme aconitate hydratase, also known as
aconitase and citrate hydro-lyase. It includes bacterial
and archaeal aconitase A, and the eukaryotic cytosolic
form of aconitase. This group...; Region: AcnA_IRP_Swivel;
cd01580"
/db_xref="CDD:238812"
misc_feature complement(234352..234360)
/locus_tag="MA5_00955"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238812"
gene complement(236796..237134)
/gene="atpC"
/locus_tag="MA5_00960"
/db_xref="GeneID:12007074"
CDS complement(236796..237134)
/gene="atpC"
/locus_tag="MA5_00960"
/EC_number="3.6.3.14"
/note="COG0355 F0F1-type ATP synthase, epsilon subunit
(mitochondrial delta subunit)"
/codon_start=1
/transl_table=11
/product="F0F1 ATP synthase subunit epsilon"
/protein_id="YP_005404459.1"
/db_xref="GI:383486779"
/db_xref="GeneID:12007074"
/translation="MHETIRVKIITPSSIAFEKQSKMVTMPGEDGMFGVLPHHVPMIV
NLKAGLVQIYIYNIHNYENTYLISGGVTEITSHYINIVTEVAINVTNLSESEISTQRY
ELQKLLSHQH"
misc_feature complement(236799..237134)
/gene="atpC"
/locus_tag="MA5_00960"
/note="F0F1 ATP synthase subunit epsilon; Validated;
Region: atpC; PRK01474"
/db_xref="CDD:100879"
misc_feature complement(236799..237122)
/gene="atpC"
/locus_tag="MA5_00960"
/note="mitochondrial ATP synthase delta subunit; Region:
F1-ATPase_delta; cd12152"
/db_xref="CDD:213395"
misc_feature complement(order(236883..236891,236895..236897,
236913..236930,237003..237017,237081..237083,
237090..237092,237096..237104,237111..237113))
/gene="atpC"
/locus_tag="MA5_00960"
/note="gamma subunit interface [polypeptide binding];
other site"
/db_xref="CDD:213395"
misc_feature complement(order(236835..236837,236856..236858,
236862..236867,236874..236876,236880..236885,
236925..236933,236937..236939,236991..236993,
236997..237002,237048..237050,237096..237098))
/gene="atpC"
/locus_tag="MA5_00960"
/note="epsilon subunit interface [polypeptide binding];
other site"
/db_xref="CDD:213395"
misc_feature complement(order(236967..236969,237015..237023,
237027..237029,237033..237035,237039..237044,
237060..237062,237066..237068))
/gene="atpC"
/locus_tag="MA5_00960"
/note="LBP interface [polypeptide binding]; other site"
/db_xref="CDD:213395"
gene complement(237248..238672)
/locus_tag="MA5_00965"
/db_xref="GeneID:12007075"
CDS complement(237248..238672)
/locus_tag="MA5_00965"
/EC_number="3.6.3.14"
/note="COG0055 F0F1-type ATP synthase, beta subunit"
/codon_start=1
/transl_table=11
/product="F0F1 ATP synthase subunit beta"
/protein_id="YP_005404460.1"
/db_xref="GI:383486780"
/db_xref="GeneID:12007075"
/translation="MTQNIGKITQVISAVVDVKFTNNGKLPEILNALECYNDKQRIVL
EVAQHIGDDTVRCIAMDSTEGLIRGLEVIDTGNPIRIPVGTETLGRIMNVVGEPIDGK
GEIKSATISSIYKPAPDFINQSTERDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT
VLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIASGVINLEEPEKSKVALVYG
QMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNIFRFTQAGSEVSALLGRIPS
AVGYQPTLATDMGELQERITSTKHGSITSVQAIYVPADDLTDPAPSTSFAHLDATTVL
SRQIAELGIYPAVDPLDSNSQVLDPMIVGEKHYGVARQVQQVLQTYKSLQDIIAILGM
DELSEEDKLTVSRARKIQRFLSQPFHVAEVFTGVEGKFVNLDDTIEGFKGLVEGKYDD
LPEAAFYMVGTIDEAVEKAKILKI"
misc_feature complement(237254..238666)
/locus_tag="MA5_00965"
/note="F0F1 ATP synthase subunit beta; Validated; Region:
PRK09280"
/db_xref="CDD:181752"
misc_feature complement(238445..238651)
/locus_tag="MA5_00965"
/note="ATP synthase alpha/beta family, beta-barrel domain;
Region: ATP-synt_ab_N; pfam02874"
/db_xref="CDD:145823"
misc_feature complement(237596..238441)
/locus_tag="MA5_00965"
/note="F1 ATP synthase beta subunit, nucleotide-binding
domain. The F-ATPase is found in bacterial plasma
membranes, mitochondrial inner membranes and in
chloroplast thylakoid membranes. It has also been found in
the archaea Methanosarcina barkeri. It uses a...; Region:
F1-ATPase_beta; cd01133"
/db_xref="CDD:29999"
misc_feature complement(order(237608..237610,237614..237616,
237620..237625,237650..237655,237686..237694,
237698..237700,237719..237721,237731..237736,
237743..237745,237794..237796,237815..237817,
237827..237829,237842..237847,237851..237859,
237875..237877,237887..237889,237896..237898,
237992..237994,238007..238015,238100..238102,
238109..238117,238298..238300,238304..238306,
238310..238315,238319..238321,238370..238372))
/locus_tag="MA5_00965"
/note="alpha subunit interaction interface [polypeptide
binding]; other site"
/db_xref="CDD:29999"
misc_feature complement(238193..238213)
/locus_tag="MA5_00965"
/note="Walker A motif; other site"
/db_xref="CDD:29999"
misc_feature complement(order(237641..237646,237896..237898,
237908..237910,238106..238108,238115..238120,
238190..238198,238205..238207))
/locus_tag="MA5_00965"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29999"
misc_feature complement(237908..237922)
/locus_tag="MA5_00965"
/note="Walker B motif; other site"
/db_xref="CDD:29999"
misc_feature complement(order(237623..237628,237644..237646,
237650..237652))
/locus_tag="MA5_00965"
/note="inhibitor binding site; inhibition site"
/db_xref="CDD:29999"
misc_feature complement(237251..237574)
/locus_tag="MA5_00965"
/note="ATP synthase alpha/beta chain, C terminal domain;
Region: ATP-synt_ab_C; pfam00306"
/db_xref="CDD:144044"
gene complement(238781..239647)
/locus_tag="MA5_00970"
/db_xref="GeneID:12007076"
CDS complement(238781..239647)
/locus_tag="MA5_00970"
/EC_number="3.6.3.14"
/note="COG0224 F0F1-type ATP synthase, gamma subunit"
/codon_start=1
/transl_table=11
/product="F0F1 ATP synthase subunit gamma"
/protein_id="YP_005404461.1"
/db_xref="GI:383486781"
/db_xref="GeneID:12007076"
/translation="MSNLKQLRTRIKSVKSTQKITKAMQLVSASKMTKIKTQIANSNF
YIEAINKMMSDICSMTSCELSIEEQKFFNTMPSKINLLIVMTSERGLCGMFNYSIIKQ
VKNDIKELTNKGEQIKLIIIGKKGYEALKRQYANYINSYFEFTKIHSENLILQVKEKI
MCAVKNLEVSNCIIYFNKFKNAMTQIPTKQKILPIEKHQDYSVVANDYFEYEGKNLIS
NLINLYVHAKINYALLQNIVSEEGARMTAMENATNNANDLISKLVLKLNRSRQTIITT
ELIEIIAGAEAV"
misc_feature complement(238835..239641)
/locus_tag="MA5_00970"
/note="mitochondrial ATP synthase gamma subunit; Region:
F1-ATPase_gamma; cd12151"
/db_xref="CDD:213394"
misc_feature complement(order(238835..238840,238844..238849,
238856..238858,238874..238876,238883..238888,
238895..238897,239252..239254,239261..239266,
239273..239278,239366..239377,239381..239383,
239555..239560,239567..239572,239576..239581,
239588..239590,239600..239602,239618..239620,
239633..239635))
/locus_tag="MA5_00970"
/note="core domain interface [polypeptide binding]; other
site"
/db_xref="CDD:213394"
misc_feature complement(order(238979..238981,238988..238993,
239000..239002,239492..239497,239504..239506,
239513..239518,239522..239527))
/locus_tag="MA5_00970"
/note="delta subunit interface [polypeptide binding];
other site"
/db_xref="CDD:213394"
misc_feature complement(order(238979..238984,238991..238993,
239219..239236,239267..239269))
/locus_tag="MA5_00970"
/note="epsilon subunit interface [polypeptide binding];
other site"
/db_xref="CDD:213394"
gene complement(239734..241272)
/locus_tag="MA5_00975"
/db_xref="GeneID:12007077"
CDS complement(239734..241272)
/locus_tag="MA5_00975"
/EC_number="3.6.3.14"
/note="COG0056 F0F1-type ATP synthase, alpha subunit"
/codon_start=1
/transl_table=11
/product="F0F1 ATP synthase subunit alpha"
/protein_id="YP_005404462.1"
/db_xref="GI:383486782"
/db_xref="GeneID:12007077"
/translation="MKLNPIEVAEILQKEIANINFLSELEEVGQVISVGDGIAKIYGL
ANVKSGEVVEFKSGVKGLILNLENDSVGAVIMGDYSKVKQGDNVKRTKDVLKVLVGKA
LLGRTVDALGNPIDGKGDIVSKEYRHIEMKAPGIIERMSVSEPVQTGIKAIDSLIPIG
RGQRELIIGDRQTGKTAIAVDTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVK
KLEDAGAMDYTIVVLATASEAASLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAV
AYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSKEKGGGSLTALPIIETQAGDV
SAYIPTNVISITDGQIFLESDLFYKGIRPAVNVGISVSRVGSAAQIKAMKQVAGSVKL
ELAQFRERESFSQFGSDLDPATQAQIEHGKRLVEILKQDQYHPCPVEEQIVSIYVGTK
KYLNDIPIQKVKEFEEAMLAEIRLNKKDILESIKTEQCITEEIEQKLKAFLENFIQAY
CVML"
misc_feature complement(239749..241272)
/locus_tag="MA5_00975"
/note="F0F1 ATP synthase subunit alpha; Validated; Region:
PRK09281"
/db_xref="CDD:181753"
misc_feature complement(241000..241197)
/locus_tag="MA5_00975"
/note="ATP synthase alpha/beta family, beta-barrel domain;
Region: ATP-synt_ab_N; pfam02874"
/db_xref="CDD:145823"
misc_feature complement(240148..240957)
/locus_tag="MA5_00975"
/note="F1 ATP synthase alpha, central domain. The F-ATPase
is found in bacterial plasma membranes, mitochondrial
inner membranes and in chloroplast thylakoid membranes. It
has also been found in the archaea Methanosarcina barkeri.
It uses a proton gradient to...; Region: F1_ATPase_alpha;
cd01132"
/db_xref="CDD:29998"
misc_feature complement(order(240154..240156,240187..240189,
240196..240201,240232..240234,240241..240243,
240352..240354,240364..240366,240373..240375,
240385..240387,240400..240405,240409..240417,
240433..240438,240619..240621,240628..240633,
240637..240648,240757..240762,240850..240852,
240856..240858,240865..240870,240874..240879,
240925..240930))
/locus_tag="MA5_00975"
/note="beta subunit interaction interface [polypeptide
binding]; other site"
/db_xref="CDD:29998"
misc_feature complement(240745..240768)
/locus_tag="MA5_00975"
/note="Walker A motif; other site"
/db_xref="CDD:29998"
misc_feature complement(order(240154..240156,240184..240189,
240202..240204,240241..240243,240289..240291,
240454..240456,240463..240468,240649..240651,
240664..240666,240742..240750,240760..240762))
/locus_tag="MA5_00975"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29998"
misc_feature complement(240466..240480)
/locus_tag="MA5_00975"
/note="Walker B motif; other site"
/db_xref="CDD:29998"
misc_feature complement(239821..240123)
/locus_tag="MA5_00975"
/note="ATP synthase alpha/beta chain, C terminal domain;
Region: ATP-synt_ab_C; pfam00306"
/db_xref="CDD:144044"
gene complement(241409..241960)
/locus_tag="MA5_00980"
/db_xref="GeneID:12007078"
CDS complement(241409..241960)
/locus_tag="MA5_00980"
/EC_number="3.6.3.14"
/note="COG0712 F0F1-type ATP synthase, delta subunit
(mitochondrial oligomycin sensitivity protein)"
/codon_start=1
/transl_table=11
/product="F0F1 ATP synthase subunit delta"
/protein_id="YP_005404463.1"
/db_xref="GI:383486783"
/db_xref="GeneID:12007078"
/translation="MNKDNLIQNYAVALFNNALLDNIQVKICEEITLLNSIIEDSFEI
KKFLFSPLVNKIDKINVFNSLVKTTNFNKIVNNFLLLLIKNSRTHILSNIVEVYNKLL
YESRNIKIVHVISTNELQPKEQEWIQSRIEKELQHKTELFFDIDNTIIGGIVIKYDNV
LRDYSIKGSLEKIAKCLKNVKIC"
misc_feature complement(241427..241960)
/locus_tag="MA5_00980"
/note="F0F1 ATP synthase subunit delta; Validated; Region:
PRK05758"
/db_xref="CDD:235593"
misc_feature complement(241436..241939)
/locus_tag="MA5_00980"
/note="ATP synthase delta (OSCP) subunit; Region: OSCP;
pfam00213"
/db_xref="CDD:215793"
gene complement(242079..243458)
/locus_tag="MA5_00985"
/db_xref="GeneID:12007079"
CDS complement(242079..243458)
/locus_tag="MA5_00985"
/EC_number="1.8.1.4"
/note="COG1249 Pyruvate/2-oxoglutarate dehydrogenase
complex, dihydrolipoamide dehydrogenase (E3) component,
and related enzymes"
/codon_start=1
/transl_table=11
/product="dihydrolipoamide dehydrogenase"
/protein_id="YP_005404464.1"
/db_xref="GI:383486784"
/db_xref="GeneID:12007079"
/translation="MEKYDVAVIGGGPGGYVAAIRAAQLKKKVVLIEKAHLGGVCLNW
GCIPTKSLLKSAEVFEYIKHAQDYGIDVGIAEINIKKIVERSRKIANTLACGVQLLLK
KNKVTIIDGVASFGENKVINVNDKPTVKAENIIIATGTRPKILQGFEPDIKQIWTSKE
AMIPQHVPKSMIIIGSGAIGIEFASFYNCIGVDVTVIEAKNRILPSEDTEIAGIAHKN
FEQKGIKIITNAKLIKQTKSQNEIEVELELEGKTQKLQATILLMAVGISANIENLGLE
KTKVEVENGYILTNGLMQTAESGIYAIGDVAGVPCLAHKASHEGIIAAESIAGLNPNG
INKHNIPYCIYSSPQIASVGLTEEIAKDLGYEIKIGRFPFSANGKALVSGNSDGLIKT
IFDVKTGELLGAHMVGLEVTELIQGYVVSKNLEGTELDLINTIFPHPTLSEMMHESVL
AAYDMAIHI"
misc_feature complement(242082..243449)
/locus_tag="MA5_00985"
/note="dihydrolipoamide dehydrogenase; Reviewed; Region:
PRK06416"
/db_xref="CDD:180558"
misc_feature complement(<243336..243437)
/locus_tag="MA5_00985"
/note="NAD(P)-binding Rossmann-like domain; Region:
NAD_binding_8; pfam13450"
/db_xref="CDD:205628"
misc_feature complement(242706..242915)
/locus_tag="MA5_00985"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
misc_feature complement(242118..242441)
/locus_tag="MA5_00985"
/note="Pyridine nucleotide-disulphide oxidoreductase,
dimerisation domain; Region: Pyr_redox_dim; pfam02852"
/db_xref="CDD:202431"
gene complement(243708..244139)
/locus_tag="MA5_00990"
/db_xref="GeneID:12007080"
CDS complement(243708..244139)
/locus_tag="MA5_00990"
/note="COG0783 DNA-binding ferritin-like protein
(oxidative damage protectant)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404465.1"
/db_xref="GI:383486785"
/db_xref="GeneID:12007080"
/translation="MQLVKALEQILADSYVLYFKTQNYHWNVEGAEFRSLHLLFEEQY
KDLAESLDEIAERIRSLGTKVPIFSNLIKLASIDGTNPSATANEMLKSLIKDQDIIRE
TLYNGLKVAQEERDECTADMIIGRIKVHEKNRWMLKSSLLI"
misc_feature complement(243717..244139)
/locus_tag="MA5_00990"
/note="DNA-binding ferritin-like protein (oxidative damage
protectant) [Inorganic ion transport and metabolism];
Region: Dps; COG0783"
/db_xref="CDD:223854"
misc_feature complement(243717..244127)
/locus_tag="MA5_00990"
/note="DPS protein, ferritin-like diiron-binding domain;
Region: DPS; cd01043"
/db_xref="CDD:153102"
misc_feature complement(order(243972..243977,243984..243986,
243996..243998,244029..244031,244062..244067,
244071..244073,244083..244088))
/locus_tag="MA5_00990"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:153102"
misc_feature complement(order(243972..243974,243984..243986,
244017..244019,244029..244031,244065..244067))
/locus_tag="MA5_00990"
/note="DPS ferroxidase diiron center [ion binding]; other
site"
/db_xref="CDD:153102"
misc_feature complement(order(243765..243770,243789..243791))
/locus_tag="MA5_00990"
/note="ion pore; other site"
/db_xref="CDD:153102"
gene complement(245927..248290)
/locus_tag="MA5_00995"
/db_xref="GeneID:12007081"
CDS complement(245927..248290)
/locus_tag="MA5_00995"
/note="COG5009 Membrane
carboxypeptidase/penicillin-binding protein"
/codon_start=1
/transl_table=11
/product="penicillin-binding protein 1A (mrcA)"
/protein_id="YP_005404466.1"
/db_xref="GI:383486786"
/db_xref="GeneID:12007081"
/translation="MYKSLFLCLKIFAVLILIGCSVTAYIIYHYSHDLPDYSQLARYY
PPSVTRIYSRDGKLIEEYAFERRVFVPINNVPSSLIESFIAAEDKNFYTHPGIDLLGI
VRAAFLNISNYLHNRRMEGASTITQQVVKNFLLTNEVSLERKIKEVIISYMISRIFTK
HQILELYLNQTFFGRGAYGVAAAAQNYFNKSVEELTIAESAFIAALPKAPSELNPDKN
YSRVKARRDYVIERMFEDGYITRDTMKEAIGSPIVLRKRAKEETVTADYYAEQVREEV
IRMLNSKEEFYRGGLTIITSLDAKMQQLAENSLRKGLREFDRKSGFRKPIANIPLDNW
QEELKKLPTPSSLLEYKLAVVLDVSDNHAKIGLIDGSKAKIPIVEMQWARSNLKSVKT
LLKKGDVIVVEPIKDCYALRQIPEVNGAIMVMNPHTGQVLASVGGYDFSTSKFDRVTQ
ALRQPGSLSKTFVYLAALENGVKPNQIFNDGPIEIVQGPGMPSWCPKNYEGQFLGDMT
MRTGFEKSRNLITVRVATAVGLTKIVDIIKRFGINNEPKKVYSMVLGSIETTLSRITN
AYAIIANGGKKVEPHFVELIQDRNGKIIYRRDNRECFSCNIADSDLDTAILEIPKEDI
YRVTDEASNYQITSFLTGAIDSGTGYAARKLGKIIAGKTGTSNDSKDTWFIGFTPKIV
VGSYVGYDTPKELGKKATGSNVVLPIFIDFMNHAYKDEPSLPFKVPDSIKLIAVDRIT
GKMIPNGTVIEAFKVNNIQMLENDYMIDNHDIFDYVPGMLDQSQEIY"
misc_feature complement(245930..248290)
/locus_tag="MA5_00995"
/note="Membrane carboxypeptidase/penicillin-binding
protein [Cell envelope biogenesis, outer membrane];
Region: MrcA; COG5009"
/db_xref="CDD:34614"
misc_feature complement(247592..248128)
/locus_tag="MA5_00995"
/note="Transglycosylase; Region: Transgly; pfam00912"
/db_xref="CDD:201501"
misc_feature complement(246152..247036)
/locus_tag="MA5_00995"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; cl01009"
/db_xref="CDD:207282"
gene complement(248294..249631)
/locus_tag="MA5_01000"
/db_xref="GeneID:12007082"
CDS complement(248294..249631)
/locus_tag="MA5_01000"
/note="COG0621 2-methylthioadenine synthetase"
/codon_start=1
/transl_table=11
/product="(dimethylallyl)adenosine tRNA
methylthiotransferase"
/protein_id="YP_005404467.1"
/db_xref="GI:383486787"
/db_xref="GeneID:12007082"
/translation="MSKKLYIKTYGCQMNVYDSVKIQDLLYPFGYESTEDIKEADIII
LNTCHIREKAAEKTYSELGRIKKLQNTRKQEGLNPAIIVVAGCVAQAEGEEIFSRTPY
VDIVVGPQSYYNLPELISKVVRHEKQLIDLDFVEEAKFDNLPEQLYPQGASSFISVQE
GCDKFCTFCVVPYTRGAEFSRSVEQVYRESLKAVSNDAKEIILLGQNVNAYHGKGPKD
KIFTLADLLKCLAQIPNLARLRYMTSHPIDMTDDLIKLHGTEPKLMPFLHLPVQSGSN
KILKAMNRKHDRDYYFNIINRLREARSDIVLSSDFIVGFPGETEQDFEDTLDLVHRVK
YGQCYSFKYSPRPGTPGAIRTDQIPEHIKSKRLTILQQELATQQLAFNQSCVGSTMRV
LFDRDGKFEDQIIGKTPYMQSVYIHNPNKSLLGKIVDVIITKAALNSLTGEIL"
misc_feature complement(248297..249631)
/locus_tag="MA5_01000"
/note="(dimethylallyl)adenosine tRNA
methylthiotransferase; Provisional; Region: PRK14325"
/db_xref="CDD:184622"
misc_feature complement(249308..249622)
/locus_tag="MA5_01000"
/note="Uncharacterized protein family UPF0004; Region:
UPF0004; pfam00919"
/db_xref="CDD:201505"
misc_feature complement(248582..249166)
/locus_tag="MA5_01000"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature complement(order(248603..248605,248696..248698,
248828..248830,248897..248905,249011..249016,
249020..249022,249122..249130,249134..249136,
249140..249142,249146..249148))
/locus_tag="MA5_01000"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
misc_feature complement(248297..248485)
/locus_tag="MA5_01000"
/note="TRAM domain; Region: TRAM; pfam01938"
/db_xref="CDD:110897"
gene complement(250333..250812)
/locus_tag="MA5_01005"
/db_xref="GeneID:12007083"
CDS complement(250333..250812)
/locus_tag="MA5_01005"
/note="COG3807 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404468.1"
/db_xref="GI:383486788"
/db_xref="GeneID:12007083"
/translation="MIKISIILIIIILSTTINANNKKLPIPRFVSIKSNEVNARRGPT
TKSAVEWVFIKKGEPVEITAEYEQWRQVRDINGECGWIHSSVLSAKRSVIIASDKEIE
LTKSADPKSRVIAKLMPKVRCSLKKCKEEFCQVTCKDYKGWISKKAIWGVYHHNDRY"
misc_feature complement(250336..250761)
/locus_tag="MA5_01005"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3807"
/db_xref="CDD:226329"
misc_feature complement(250549..250716)
/locus_tag="MA5_01005"
/note="Bacterial SH3 domain; Region: SH3_4; pfam06347"
/db_xref="CDD:115031"
misc_feature complement(250360..250524)
/locus_tag="MA5_01005"
/note="Bacterial SH3 domain; Region: SH3_4; pfam06347"
/db_xref="CDD:115031"
gene complement(250805..252532)
/locus_tag="MA5_01010"
/db_xref="GeneID:12007084"
CDS complement(250805..252532)
/locus_tag="MA5_01010"
/note="COG0475 Kef-type K+ transport systems, membrane
components"
/codon_start=1
/transl_table=11
/product="glutathione-regulated potassium-efflux system
protein KEFB (kefB)"
/protein_id="YP_005404469.1"
/db_xref="GI:383486789"
/db_xref="GeneID:12007084"
/translation="MNDHILINVIILLGTAVFIVAILKRFRLSPVLGYLIAGAAIGDH
GLKIVTYDQTKLLGELGVVFLLFAIGLELSFERLKAMRRYVFGLGSLQVLTTAIVIAG
AMVLIDGNSSAAIITGGGLALSSTALVMQVIDENRSQSTQIGRISLAILLLQDLAVVP
LLVIVPLLASNNKASLAVALGIAFLKAVTALLTIFIVGRVLLRPVFSFISSESNNTSE
LPISMTLLIVLSAAWATETFGLSLALGAFVAGVLVAETEFRLQAEESIYPFKSLFLGL
FFMTVGMNIDALEMYEKISHILTLSIALICIKTLIITAFCILFGFNKGVAFYSGLLLS
QGGEFGFILFSLGKDSGVLEESTADILLLVVTFTMALTPLLAALGKKIAEKVDKGLGK
TPTQMIELGARDLTNHIIIAGLGNTGKMVARVLEAEGISYVILDLDDDRVKEELSNGL
PVFKGDVSQADTLKALGTERAFAIILTMNNQVTIKKSLKTISSNYQDIPVVVKLKNLK
NAREFYDLGATTIIPESYETGLQIGGTVLKNIGISEQEINRIKVQFRLGNYIIAKKED
ALSEVEDND"
misc_feature complement(250868..252532)
/locus_tag="MA5_01010"
/note="glutathione-regulated potassium-efflux system
protein KefB; Provisional; Region: PRK03659"
/db_xref="CDD:179625"
misc_feature complement(251348..252532)
/locus_tag="MA5_01010"
/note="Kef-type K+ transport systems, membrane components
[Inorganic ion transport and metabolism]; Region: KefB;
COG0475"
/db_xref="CDD:223551"
misc_feature complement(250967..251308)
/locus_tag="MA5_01010"
/note="TrkA-N domain; Region: TrkA_N; pfam02254"
/db_xref="CDD:216949"
gene complement(252529..252855)
/locus_tag="MA5_01015"
/db_xref="GeneID:12007085"
CDS complement(252529..252855)
/locus_tag="MA5_01015"
/note="COG0799 Uncharacterized homolog of plant Iojap
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404470.1"
/db_xref="GI:383486790"
/db_xref="GeneID:12007085"
/translation="MKKETEELKLFILECLIEKKAEDIEVIDLRAKNKLADYIIFASG
RSTKNVGAIAEYVALALKNNACINSNIEGLGKSEWVLIDAGAILINIFYPEVREHFKL
EEIWKR"
misc_feature complement(252532..252849)
/locus_tag="MA5_01015"
/note="Uncharacterized homolog of plant Iojap protein
[Function unknown]; Region: COG0799"
/db_xref="CDD:31142"
gene 252991..253224
/locus_tag="MA5_01020"
/db_xref="GeneID:12007086"
CDS 252991..253224
/locus_tag="MA5_01020"
/note="COG0271 Stress-induced morphogen (activity
unknown)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404471.1"
/db_xref="GI:383486791"
/db_xref="GeneID:12007086"
/translation="MAISAEELEKILKKSFPSSVIKITDLVGDQDHYALEISDAQFNG
LSLINQHKLVKNALSEILNKKLHSISIKTISIP"
misc_feature 252991..253221
/locus_tag="MA5_01020"
/note="Stress-induced morphogen (activity unknown) [Signal
transduction mechanisms]; Region: BolA; COG0271"
/db_xref="CDD:223349"
gene 254797..254873
/locus_tag="MA5_t04321"
/db_xref="GeneID:12007087"
tRNA 254797..254873
/locus_tag="MA5_t04321"
/product="tRNA-Pro"
/db_xref="GeneID:12007087"
gene 254891..255106
/gene="infA"
/locus_tag="MA5_01025"
/db_xref="GeneID:12007088"
CDS 254891..255106
/gene="infA"
/locus_tag="MA5_01025"
/note="COG0361 Translation initiation factor 1 (IF-1)"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-1"
/protein_id="YP_005404472.1"
/db_xref="GI:383486792"
/db_xref="GeneID:12007088"
/translation="MSKDDLIQFTGTVLELLPNATFRVKLENDHIIIAHTSGRMRKNR
IRILLGDKVTVEMTPYDLTKGRVIHRH"
misc_feature 254909..255100
/gene="infA"
/locus_tag="MA5_01025"
/note="S1_IF1: Translation Initiation Factor IF1, S1-like
RNA-binding domain. IF1 contains an S1-like RNA-binding
domain, which is found in a wide variety of RNA-associated
proteins. Translation initiation includes a number of
interrelated steps preceding the...; Region: S1_IF1;
cd04451"
/db_xref="CDD:239898"
misc_feature order(254933..254941,254957..254959,254993..254995,
255002..255007,255020..255031,255080..255082,
255086..255088)
/gene="infA"
/locus_tag="MA5_01025"
/note="rRNA binding site [nucleotide binding]; other site"
/db_xref="CDD:239898"
misc_feature order(254993..254995,255005..255007,255098..255100)
/gene="infA"
/locus_tag="MA5_01025"
/note="predicted 30S ribosome binding site; other site"
/db_xref="CDD:239898"
gene 255119..255787
/locus_tag="MA5_01030"
/db_xref="GeneID:12007089"
CDS 255119..255787
/locus_tag="MA5_01030"
/note="COG0424 Nucleotide-binding protein implicated in
inhibition of septum formation"
/codon_start=1
/transl_table=11
/product="Maf-like protein"
/protein_id="YP_005404473.1"
/db_xref="GI:383486793"
/db_xref="GeneID:12007089"
/translation="MKQHIKNLPIILASGSLARVELLDRIKIIPTQIIPAYIDETPNL
RELPAPLAIRLAYEKAIKVASQIETSSIIIAADTVTAVGRRILPKATTYEEVKHCIKM
VSGRRHRVYTGLCIIKKENNQLTFRQKIVQTIIKFKKLSDEEINFYSSLDEGIDKAGG
CKISGYAEAFVSFISGSYSNIMGLPLFETVNALTSLGFRYSNNTPNVYKDPSTNHLSK
PSIS"
misc_feature 255140..255712
/locus_tag="MA5_01030"
/note="Maf-like protein; Region: Maf; pfam02545"
/db_xref="CDD:202278"
misc_feature 255146..255697
/locus_tag="MA5_01030"
/note="Nucleotide binding protein Maf. Maf has been
implicated in inhibition of septum formation in
eukaryotes, bacteria and archaea, but homologs in
B.subtilis and S.cerevisiae are nonessential for cell
division. Maf has been predicted to be a nucleotide-
or...; Region: Maf; cd00555"
/db_xref="CDD:238310"
misc_feature order(255158..255160,255173..255175,255236..255238,
255293..255295,255347..255349,255383..255385)
/locus_tag="MA5_01030"
/note="active site"
/db_xref="CDD:238310"
misc_feature order(255275..255277,255491..255508)
/locus_tag="MA5_01030"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238310"
gene complement(255827..256009)
/locus_tag="MA5_01035"
/db_xref="GeneID:12007090"
CDS complement(255827..256009)
/locus_tag="MA5_01035"
/note="COG1734 DnaK suppressor protein"
/codon_start=1
/transl_table=11
/product="DnaK suppressor protein"
/protein_id="YP_005404474.1"
/db_xref="GI:383486794"
/db_xref="GeneID:12007090"
/translation="MSKIEEALSRIKNGEYGYCEETGAPIGIKRLEARPIAALCIEAQ
ERHENYERSHLDEPGN"
misc_feature complement(255872..>256009)
/locus_tag="MA5_01035"
/note="RNA polymerase-binding protein DksA; Region: dksA;
TIGR02420"
/db_xref="CDD:131473"
gene complement(256351..257268)
/gene="xerC"
/locus_tag="MA5_01040"
/db_xref="GeneID:12007091"
CDS complement(256351..257268)
/gene="xerC"
/locus_tag="MA5_01040"
/note="COG0582 Integrase"
/codon_start=1
/transl_table=11
/product="site-specific tyrosine recombinase XerC"
/protein_id="YP_005404475.1"
/db_xref="GI:383486795"
/db_xref="GeneID:12007091"
/translation="MLDISIQELIKQWQKYLILQKNYSNNTVIAYNNDLKHFLEFMNY
YNSELVTLNHIKTADIRLIRSWLAKRKCENFTASSIARGLSTVKNFYKFLEKTLLLNN
HIIFSIKSPKKAKLLPKGLSVDDVLISLEHIEEYGNVKWVELRNKALIVLIYAAGLRI
SEALSITKLHLQNLEFIKIIGKGSKERIIPWLPLTKNLITKYLEILPYKLDENEPIFR
GRQGKKLQPSVFNRELIKLKRIYGLPEYLTAHSFRHSFASHLLEYGADLRSIQELLGH
KSLSTTQKYTQTSIKHLEAVYNTAYPIKK"
misc_feature complement(256363..257268)
/gene="xerC"
/locus_tag="MA5_01040"
/note="site-specific tyrosine recombinase XerC; Reviewed;
Region: xerC; PRK00236"
/db_xref="CDD:234698"
misc_feature complement(256378..257241)
/gene="xerC"
/locus_tag="MA5_01040"
/note="DNA breaking-rejoining enzymes, C-terminal
catalytic domain. The DNA breaking-rejoining enzyme
superfamily includes type IB topoisomerases and tyrosine
recombinases that share the same fold in their catalytic
domain containing six conserved active site...; Region:
DNA_BRE_C; cl00213"
/db_xref="CDD:241691"
misc_feature complement(order(256414..256416,256519..256527,
256723..256725,256789..256794))
/gene="xerC"
/locus_tag="MA5_01040"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238231"
misc_feature complement(order(256414..256416,256441..256443,
256510..256512,256519..256521,256723..256725,
256792..256794))
/gene="xerC"
/locus_tag="MA5_01040"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:238231"
misc_feature complement(order(256414..256416,256441..256443,
256510..256512,256519..256521,256792..256794))
/gene="xerC"
/locus_tag="MA5_01040"
/note="active site"
/db_xref="CDD:238231"
gene 257433..257912
/locus_tag="MA5_01045"
/db_xref="GeneID:12007092"
CDS 257433..257912
/locus_tag="MA5_01045"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404476.1"
/db_xref="GI:383486796"
/db_xref="GeneID:12007092"
/translation="MLNNTQFLNLMKSYMKPEFYMSSIKNTTNLDLSSITNTIQKAMN
IFFTTNKISTESMQSLFKKNSEIIQNNINTILNSTKEVINSKDFKQATEYHQKCVKSI
YETSMDNAKELANIAYEASNKIFEAANKHITENIHNASNNIHNTTEQVQKNFNNKSA"
misc_feature 257529..257831
/locus_tag="MA5_01045"
/note="Phasin protein; Region: Phasin_2; pfam09361"
/db_xref="CDD:204210"
gene complement(257960..258577)
/locus_tag="MA5_01050"
/db_xref="GeneID:12007093"
CDS complement(257960..258577)
/locus_tag="MA5_01050"
/note="COG1502
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi
n synthases and related enzymes"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404477.1"
/db_xref="GI:383486797"
/db_xref="GeneID:12007093"
/translation="MKSKNNKFIAVSISFILGIALGIYVESTYYFTNIINSKSFSLSN
AQINYYSISELSRSNVSTCFTPPAGCTKFIVQQIEKAEESIYMQAYGMSDSLITTALI
NAQMRGVKVRILLDRSNLKQKFSKLYELQQAKIDVGIDTVPGIAHNKVIIIDKKKVIT
GSFNFTVSADKRNAENVILIEDRKLAESYLQNWFSRKTTSNAVHF"
misc_feature complement(257990..258403)
/locus_tag="MA5_01050"
/note="Catalytic domain of EDTA-resistant nuclease Nuc
from Salmonella typhimurium and similar proteins; Region:
PLDc_Nuc; cd09170"
/db_xref="CDD:197267"
misc_feature complement(257990..258358)
/locus_tag="MA5_01050"
/note="PLD-like domain; Region: PLDc_2; pfam13091"
/db_xref="CDD:221916"
misc_feature complement(order(258053..258055,258086..258088,
258092..258094,258131..258133,258137..258139))
/locus_tag="MA5_01050"
/note="putative active site [active]"
/db_xref="CDD:197267"
misc_feature complement(258137..258139)
/locus_tag="MA5_01050"
/note="catalytic site [active]"
/db_xref="CDD:197267"
gene complement(258712..260466)
/locus_tag="MA5_01055"
/db_xref="GeneID:12007094"
CDS complement(258712..260466)
/locus_tag="MA5_01055"
/note="COG3243 Poly(3-hydroxyalkanoate) synthetase"
/codon_start=1
/transl_table=11
/product="poly(3-hydroxyalkanoate) synthetase"
/protein_id="YP_005404478.1"
/db_xref="GI:383486798"
/db_xref="GeneID:12007094"
/translation="MYNITHETIINNFKEIANKYQELILHFMQGKGSMIPRSLIDSDK
NIIIVSCIIEQFCKNPQKFCQLNIEYIEKLRELTTNSFAKFVGNTSKDVFSTDNRDKR
FKDALWEDNVYFHFVKQYYLLSAEWIKKNIEQYELSHDLKQHLEFTTKHFIDAFAPSN
FAFCNPKVLRETLESGGHNLVQGLENFLRDIKSSGDILNINTTDKSAFKLGQNIAATK
GKIIFQNDLMQLICYEPKEKVHKIPIFIIPPCINKYYILDLSSHNSLVSFLVENNFQV
FLISWVNPDTSLSKKGFEDYLKEGILAPFEYVKNLGFAKIDFVGYCMGGMFLAIIIAY
FKVKRIDSVHSSTFFTTLLDYTNPGELGIFLNKNTINYIKEEIKLKGYFDGKYLSNSF
SLLRANDLIWTFFVNNYLLGKKPMPFDLLYWNADSTNLPAKMYEEYLHNTYCNNLLKE
SNALEVLGTKIDLGNVDCNSFFLAAKEDHITPWRSIYDGVKLLNGRKIFCLTDSGHVA
GVVNHPDNAKYNYRLNYDLSLSSHEWFMQATEYKGSWWNYWIDWLIKNNDTKMLVDSL
DYQNLDVIESAPGSYVRR"
misc_feature complement(258718..260301)
/locus_tag="MA5_01055"
/note="poly(R)-hydroxyalkanoic acid synthase, class I;
Region: PHA_synth_I; TIGR01838"
/db_xref="CDD:211692"
misc_feature complement(259660..260172)
/locus_tag="MA5_01055"
/note="Poly-beta-hydroxybutyrate polymerase (PhaC)
N-terminus; Region: PhaC_N; pfam07167"
/db_xref="CDD:203590"
gene complement(260515..261993)
/locus_tag="MA5_01060"
/db_xref="GeneID:12007095"
CDS complement(260515..261993)
/locus_tag="MA5_01060"
/note="COG0043 3-polyprenyl-4-hydroxybenzoate
decarboxylase and related decarboxylases"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404479.1"
/db_xref="GI:383486799"
/db_xref="GeneID:12007095"
/translation="MSFRDLPEFLKFLEKNGQLKRISTTVKTDLEITEISRRVLAQGG
PALLFENVIKADGSKSTIPVVTNLYASIKRICIGLNLKSPAELRELGALLAFLKQPQI
PESFKETLSILPLAKRIFSMSPKTIAKGACHEVVIVKPNINILPIQKCWPEDISPLIT
WGIVVTKGPTKDRVDHYNLGIYRMQVVSENKLLMRWLKLRGGAEHHKRWKTKKKELFP
AAVVIGANPVITLAAVTPIPENVSEYNFAGLLGNKKIELVQCKTIDLKVPAHSEIVLE
GYVSLVEYLPEGPFGDHTGYYNDVEEFPIFTVTAITMKKKPIYLSTYTGKPPDEPSIL
GEALNEIFIPILHQQFPEIVDFWFPPEGCSYRVVVVSIKKSYPGHAKRIMLGIWSYLR
QFMYNKFIIVVDDDIDVRNWQEVIWAIATRSDPKRDTSFIDNSPIDYLDFASPKSGLG
SKMGIDATDKMYPETNRKWGKKIEMSQEVIDKIDSMWDGLNI"
misc_feature complement(260518..261993)
/locus_tag="MA5_01060"
/note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase;
Region: UbiD; cl00311"
/db_xref="CDD:206974"
gene complement(262095..263681)
/locus_tag="MA5_01065"
/db_xref="GeneID:12007096"
CDS complement(262095..263681)
/locus_tag="MA5_01065"
/note="COG0760 Parvulin-like peptidyl-prolyl isomerase"
/codon_start=1
/transl_table=11
/product="parvulin-like peptidyl-prolyl isomerase"
/protein_id="YP_005404480.1"
/db_xref="GI:383486800"
/db_xref="GeneID:12007096"
/translation="MLDNIRKTSDSFIMRVLFAIIAFAFVGFGIKDILNVRRNSDIVI
FSHAKNISKQDFLQAKSLEINAISKQMGKSLIDEEITQLNIDNRILKRLIYNNILDYL
VSYYDLDLGDDTVKILVKESPMFKNEQGVFDIEIFKTYFKNAYIGEEKYLLNFKEKVL
KNLIVSTFAKSFYVPKAMTDNIVDYMAEKREVELIQLDLQNKPKDLQIHTPTDQQLKD
FYQDNKAAFEVPEKRSFSYIKANIKDFKISVTQDELLEFYNENKDEFGDQSFEAVQTQ
LHDLLRAKKIDILNMELAKKLEDEIASGASLVEISEKYKLPIQNVNYVSYAELIGDNI
MADNIAESADSIFELSEGELSYPIEAEDKSYLILVELKSIQPAQIPKFNAIKDQVNKV
WIKRNIEDVNFKMIKDLAKEYNADPEQIKDFNAVGIKISKKNYIRMEIENDLTLTPEI
LLSIFNTKIGSNTPVFRVGDIVYFAHIKSRSIDELTAQNIHVNLEKNIIYNIKNSVIE
ELINYTIMQNDMKIKSNFTK"
misc_feature complement(<262509..263681)
/locus_tag="MA5_01065"
/note="periplasmic folding chaperone; Provisional; Region:
PRK10788"
/db_xref="CDD:182731"
misc_feature complement(262521..262937)
/locus_tag="MA5_01065"
/note="PPIC-type PPIASE domain; Region: Rotamase_2;
pfam13145"
/db_xref="CDD:221934"
gene complement(266622..268856)
/locus_tag="MA5_01070"
/db_xref="GeneID:12007097"
CDS complement(266622..268856)
/locus_tag="MA5_01070"
/note="COG1674 DNA segregation ATPase FtsK/SpoIIIE and
related proteins"
/codon_start=1
/transl_table=11
/product="DNA translocase FtsK"
/protein_id="YP_005404481.1"
/db_xref="GI:383486801"
/db_xref="GeneID:12007097"
/translation="MLFYINKILSNNKVQAVILWIIGLAIVIVLMSYNIDDPSFNSVT
TEYPSNLIGIVGAYLSDFLYQFFGLTSFIIPLACFIWGRNCWYGRYRSAFIRIFVVLL
ALISSSTLLSKIKLELIPASAGGAIGIIVSNFCERFINQLYLLLIFPTFIILVVLLEI
KFTAISNFMIKLSKFLTYWILLFFNYVLPRLSLIGLFPIKNNDKLNITSFYQKPASGK
VKFTEEASLIPTNPIKCFIKPVCTKISQNQIASLPPISLLCDPKNNHVKGASSSELKQ
KAEELLTVLNDFGVKGQIININQGPVVTQYEFEPAAGTKTSRVVGLSDDIARSLSALS
TRIAVIPGKNVLGIELPNKQREFFCLKELIETNEYQDKSILLPLVLGKDLAGKPLIAD
LAKMPHLLVAGTTGSGKSVGINAMIVSLLYRYTPEECRFIMIDPKMLELSAYDGIPHL
LTPVVTEPSKAVIALKWAVKEMENRYRMMSNIGVKNIAGYNAKILEAVKENRVIERPI
QTGFDPETGKPIYETVTMNMVKLPYIVVIVDEMADLMLVSGKDIEMLIQRLSQMARAA
GIHIIMATQRPSVDVITGVIKANFPSRISFKVTSKIDSRTILGEQGSEQLLGMGDMLF
MGNTSKISRVHGPFVNEAEIAKITEYLKETSMPVYISAVTEQPEENYSSIDIGDGSID
EVLYKKAVQIVRNERKSSISYIQRSLRIGYNKAANLVEKMEKDGIVSSPNHTGKREIL
LPEM"
misc_feature complement(<268563..268805)
/locus_tag="MA5_01070"
/note="Domain of unknown function (DUF4117); Region:
DUF4117; pfam13491"
/db_xref="CDD:205669"
misc_feature complement(267120..267782)
/locus_tag="MA5_01070"
/note="FtsK/SpoIIIE family; Region: FtsK_SpoIIIE;
pfam01580"
/db_xref="CDD:190044"
misc_feature complement(266628..266828)
/locus_tag="MA5_01070"
/note="Ftsk gamma domain; Region: Ftsk_gamma; pfam09397"
/db_xref="CDD:204229"
gene 269709..270488
/locus_tag="MA5_01075"
/db_xref="GeneID:12007098"
CDS 269709..270488
/locus_tag="MA5_01075"
/EC_number="3.4.11.18"
/note="COG0024 Methionine aminopeptidase"
/codon_start=1
/transl_table=11
/product="methionine aminopeptidase"
/protein_id="YP_005404482.1"
/db_xref="GI:383486802"
/db_xref="GeneID:12007098"
/translation="MTIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDL
CHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGIPNDKPLKNGDIVNIDVTVILDG
WYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNY
SVVRDYTGHGIGRVFHDKPSILNYGSNGTGLTLKEGMFFTVEPMINAGNYDTILSKLD
GWTVTTRDKSLSAQFEHTIGVTKDGFEIFTLSPKKLDYPPY"
misc_feature 269745..270455
/locus_tag="MA5_01075"
/note="Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also
known as methionyl aminopeptidase and Peptidase M.
Catalyzes release of N-terminal amino acids,
preferentially methionine, from peptides and arylamides;
Region: MetAP1; cd01086"
/db_xref="CDD:29971"
misc_feature order(269940..269942,269991..269993,270024..270026,
270213..270215,270312..270314,270408..270410)
/locus_tag="MA5_01075"
/note="active site"
/db_xref="CDD:29971"
gene 270945..271925
/locus_tag="MA5_01080"
/db_xref="GeneID:12007099"
CDS 270945..271925
/locus_tag="MA5_01080"
/note="COG0472 UDP-N-acetylmuramyl pentapeptide
phosphotransferase/UDP-N-acetylglucosamine-1-phosphate
transferase"
/codon_start=1
/transl_table=11
/product="undecaprenyl-phosphate
alpha-N-acetylglucosaminyltransferase (mraY2)"
/protein_id="YP_005404483.1"
/db_xref="GI:383486803"
/db_xref="GeneID:12007099"
/translation="MNINSYSALFIFSFIATTILTYILTKYLPTIGLVDVPSNRRSHN
KITPRGGGLAIVIVVMIALSGFEYIMSHNLVNSIKILPLLLVIASISFLDDLKAVPIL
IRLIVHLICAACAILFFSQINSHILIHNILIIALSGFINIYNFMDGIDGMSCVESIHL
SSTMLVLCFLQFSIIDNPYFIASVNVIILGCSCGFLIFNWHPAKIFLGDVGSISLGFL
TGLCLLLLALTSTNLFIACVIASLYYMTDAVLTILIRLLNKEKIWQPHLKHFFQKAVQ
KGKSHKQVVSIIAICNIFLMIISVISLNFPVISIMLAIAVITLTMHSLLK"
misc_feature 270948..271862
/locus_tag="MA5_01080"
/note="UDP-N-acetylmuramyl pentapeptide
phosphotransferase/UDP-N- acetylglucosamine-1-phosphate
transferase [Cell envelope biogenesis, outer membrane];
Region: Rfe; COG0472"
/db_xref="CDD:30820"
misc_feature 271041..271796
/locus_tag="MA5_01080"
/note="The members of this subfamily catalyze the
formation of a phosphodiester bond between a
membrane-associated undecaprenyl-phosphate (Und-P)
molecule and N-acetylhexosamine 1-phosphate, which is
usually donated by a soluble UDP-N-acetylhexosamine
precursor; Region: GT_WbpL_WbcO_like; cd06854"
/db_xref="CDD:133464"
misc_feature 271224..271229
/locus_tag="MA5_01080"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:133464"
misc_feature 271560..271571
/locus_tag="MA5_01080"
/note="putative catalytic motif [active]"
/db_xref="CDD:133464"
misc_feature order(271707..271709,271740..271751)
/locus_tag="MA5_01080"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:133464"
gene 271922..272248
/locus_tag="MA5_01085"
/db_xref="GeneID:12007100"
CDS 271922..272248
/locus_tag="MA5_01085"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404484.1"
/db_xref="GI:383486804"
/db_xref="GeneID:12007100"
/translation="MKLIKEDIDKIVRRIFAKQHPLLPKIMINWHKIVGFNFSTKALP
LKIKTYTYKKQKINILLIQAEDNATAAELPYYQDIILERIKIYLGFEAIHQMNVTFYK
AKSKVR"
misc_feature 271931..272215
/locus_tag="MA5_01085"
/note="Protein of unknown function (DUF721); Region:
DUF721; pfam05258"
/db_xref="CDD:218524"
gene complement(272502..273260)
/locus_tag="MA5_01090"
/db_xref="GeneID:12007101"
CDS complement(272502..273260)
/locus_tag="MA5_01090"
/note="COG3637 Opacity protein and related surface
antigens"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404485.1"
/db_xref="GI:383486805"
/db_xref="GeneID:12007101"
/translation="MKKLLLIAATSTALLTSGISFADHDMNCSVDSSTNTSMSSSIEK
QWYLKLNAGGVMFNKTKPKGKDFKLKTNTGFIGNVGVGYYIMDNLRTDLTIGAVTSAH
LKKSTTGKSSAGSSSTKSIKHKPTIVSALLNGYVDFIDLSMFKVFAGAGVGLAMVKEK
VTGKEAIAIVSDKNTTSKDHNHNTKNKTNFVYQLSLGTSFELAQGIKVELAYAWIDYG
KTKTITKTIHGVQYKYGGTRYKGSNLMAGLRFDM"
misc_feature complement(272505..273128)
/locus_tag="MA5_01090"
/note="Opacity protein and related surface antigens [Cell
envelope biogenesis, outer membrane]; Region: COG3637"
/db_xref="CDD:226163"
gene complement(273482..274150)
/locus_tag="MA5_01095"
/db_xref="GeneID:12007102"
CDS complement(273482..274150)
/locus_tag="MA5_01095"
/note="COG3637 Opacity protein and related surface
antigens"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404486.1"
/db_xref="GI:383486806"
/db_xref="GeneID:12007102"
/translation="MKKLLLIATASATILSSSVSFAECIDNEWYLRADAGVAMFNKEQ
DKATGVKLKSNKAIPIDLGIGYYISENVRADLTLGTTIGGKLKKYGAATNTHFTGTNV
SVSHKPTVTRLLINGYVDLTSFDMFDVFVGGGVGPALVKEKISGVSGLASNTKNKTNV
SYKLIFGTSAQIADGVKVELAYSWINDGKTKTHNVMYKGASVQTGGMRYQSHNLTVGV
RFGI"
misc_feature complement(273491..274069)
/locus_tag="MA5_01095"
/note="Opacity protein and related surface antigens [Cell
envelope biogenesis, outer membrane]; Region: COG3637"
/db_xref="CDD:226163"
gene complement(274302..274634)
/locus_tag="MA5_01100"
/db_xref="GeneID:12007103"
CDS complement(274302..274634)
/locus_tag="MA5_01100"
/note="COG1146 Ferredoxin"
/codon_start=1
/transl_table=11
/product="ferredoxin (fdxA)"
/protein_id="YP_005404487.1"
/db_xref="GI:383486807"
/db_xref="GeneID:12007103"
/translation="MTYVVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCG
VCVPDCPIDAIKPESPELIEWVERAKDFIENHGWKNITKKKCALPGADKFKDEKDKFN
KYIIKNMN"
misc_feature complement(274440..274625)
/locus_tag="MA5_01100"
/note="Ferredoxin [Energy production and conversion];
Region: COG1146"
/db_xref="CDD:31341"
misc_feature complement(274467..274538)
/locus_tag="MA5_01100"
/note="4Fe-4S binding domain; Region: Fer4; cl02805"
/db_xref="CDD:207738"
gene complement(274639..275331)
/locus_tag="MA5_01105"
/db_xref="GeneID:12007104"
CDS complement(274639..275331)
/locus_tag="MA5_01105"
/note="COG0755 ABC-type transport system involved in
cytochrome c biogenesis, permease component"
/codon_start=1
/transl_table=11
/product="HEME exporter protein C (ccmC)"
/protein_id="YP_005404488.1"
/db_xref="GI:383486808"
/db_xref="GeneID:12007104"
/translation="MLKLLTPYYFNKLSRIIIPILAVSTLVMMIIALYLALIVSPIDY
QQGEFVRIMYVHVPASWMALGIYVFMAICSFSYLVWKTTISYLLAVASSDIGAIFTLI
SLVTGSLWGKPIWGTWWVWDARLTSMLILFLLYLSYIIIVNSVDNIRKAQNPASIIAL
IGLINIPIIKFSVNIWYSLHQPASVLRLGSPTIHASMLKPLITMFISFILYFLLVLLL
RTVILIDKIKNR"
misc_feature complement(274720..275211)
/locus_tag="MA5_01105"
/note="heme exporter protein CcmC; Region: ccmC;
TIGR01191"
/db_xref="CDD:233306"
gene complement(275476..275967)
/locus_tag="MA5_01110"
/db_xref="GeneID:12007105"
CDS complement(275476..275967)
/locus_tag="MA5_01110"
/note="COG0590 Cytosine/adenosine deaminases"
/codon_start=1
/transl_table=11
/product="cytosine deaminase"
/protein_id="YP_005404489.1"
/db_xref="GI:383486809"
/db_xref="GeneID:12007105"
/translation="MNILLDKKTYFNNFFMEQALKQARLAFDKNEVPVGVVIVCRLNQ
KIIVSSHNNIEEKKNPLCHAEIIAINTACNLISSKNLNDYDIYVTLEPCAMCASAISH
SRLKRLFYGASDSKHGAVESNLRYFNSNSCFYRPEIYSGILSEHSRFLMQEFFQRIRS
AID"
misc_feature complement(275593..275922)
/locus_tag="MA5_01110"
/note="Nucleoside deaminases include adenosine, guanine
and cytosine deaminases. These enzymes are Zn dependent
and catalyze the deamination of nucleosides. The zinc ion
in the active site plays a central role in the proposed
catalytic mechanism, activating a...; Region:
nucleoside_deaminase; cd01285"
/db_xref="CDD:29828"
misc_feature complement(order(275680..275682,275689..275691,
275773..275781,275812..275814,275866..275868))
/locus_tag="MA5_01110"
/note="nucleoside/Zn binding site; other site"
/db_xref="CDD:29828"
misc_feature complement(order(275659..275664,275671..275676,
275683..275688,275758..275760,275770..275772,
275785..275787))
/locus_tag="MA5_01110"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29828"
misc_feature complement(order(275680..275682,275689..275694,
275773..275781))
/locus_tag="MA5_01110"
/note="catalytic motif [active]"
/db_xref="CDD:29828"
gene complement(275948..276850)
/locus_tag="MA5_01115"
/db_xref="GeneID:12007106"
CDS complement(275948..276850)
/locus_tag="MA5_01115"
/note="COG0053 Predicted Co/Zn/Cd cation transporters"
/codon_start=1
/transl_table=11
/product="protein P34 (p34)"
/protein_id="YP_005404490.1"
/db_xref="GI:383486810"
/db_xref="GeneID:12007106"
/translation="MNNSHHRLIKSVSYLSVTTALIILIIKLYAWVVTSSQSILASLI
DSMLDITSSFINLVALRFALQPPDHYHRFGHEKMQDLTIFSQSIFFFASAFFVGFASV
KSLFIKTKPENISDGTIIMYLCMFLTIILVLYQTYVIKKTGSEIVKADKLHYFTDLLT
NVIVIISINLSDYFWFVDPLFGVVISLYIFHSSYSLFKKAFKNLVDHELPEQDRQKII
SIVNNHSGVKGMHEMKTRYAAQKAFIQCHLEMDGNISLYSAHKISDEIAFEILQKFPE
AEIIIHQDPFGIEEHVNYREYIVR"
misc_feature complement(275951..276850)
/locus_tag="MA5_01115"
/note="Predicted Co/Zn/Cd cation transporters [Inorganic
ion transport and metabolism]; Region: MMT1; COG0053"
/db_xref="CDD:223131"
misc_feature complement(275996..276850)
/locus_tag="MA5_01115"
/note="Cation efflux family; Region: Cation_efflux;
cl00316"
/db_xref="CDD:241777"
gene 276972..277451
/locus_tag="MA5_01120"
/db_xref="GeneID:12007107"
CDS 276972..277451
/locus_tag="MA5_01120"
/note="COG4520 Surface antigen"
/codon_start=1
/transl_table=11
/product="17 kD surface antigen"
/protein_id="YP_005404491.1"
/db_xref="GI:383486811"
/db_xref="GeneID:12007107"
/translation="MKLLSKIMIIALAASMLQACNGQSGMNKQGTGTLLGGAGGALLG
SQFGQGKGQLVGVGVGALLGAVLGGQIGASMDEQDRRLLELTSQRALESAPSGSNIEW
RNPDNGNHGYVTPNKTYRNSAGQYCREYTQTVIIGGKQQKTYGNACRQPDGQWQVVN"
misc_feature 277008..277448
/locus_tag="MA5_01120"
/note="Surface antigen [Cell envelope biogenesis, outer
membrane]; Region: LipA; COG4520"
/db_xref="CDD:226903"
gene 277540..278241
/locus_tag="MA5_01125"
/db_xref="GeneID:12007108"
CDS 277540..278241
/locus_tag="MA5_01125"
/note="COG1121 ABC-type Mn/Zn transport systems, ATPase
component"
/codon_start=1
/transl_table=11
/product="iron ABC transporter ATP-binding protein"
/protein_id="YP_005404492.1"
/db_xref="GI:383486812"
/db_xref="GeneID:12007108"
/translation="MQKPIIEFRNVSKKFGNKTPISKVSFIVKKNNITTLIGPNGAGK
TTIVRLMLGLEKPTSGEVIIDRKLKIGYVPQKFGLTTDIPITVKKFLDLLAPSHFNKN
IKEISSFIDLEHIKKQEISKLSGGQFQKVVLACSIINNPDLIILDEPLQSLDVTSQQE
FYQLIHFIRKKLNITVFMISHDLFTVIKNSDQVICLNGHICCSGVPHEITPNSEFSNA
LSSLGFYTHNHDHKH"
misc_feature 277543..278238
/locus_tag="MA5_01125"
/note="ABC-type Mn/Zn transport systems, ATPase component
[Inorganic ion transport and metabolism]; Region: ZnuC;
COG1121"
/db_xref="CDD:224046"
misc_feature 277558..278151
/locus_tag="MA5_01125"
/note="ATP-binding cassette domain of the metal-type
transporters; Region: ABC_Metallic_Cations; cd03235"
/db_xref="CDD:213202"
gene complement(279267..282128)
/gene="uvrA"
/locus_tag="MA5_01130"
/db_xref="GeneID:12007109"
CDS complement(279267..282128)
/gene="uvrA"
/locus_tag="MA5_01130"
/note="COG0178 Excinuclease ATPase subunit"
/codon_start=1
/transl_table=11
/product="excinuclease ABC subunit A"
/protein_id="YP_005404493.1"
/db_xref="GI:383486813"
/db_xref="GeneID:12007109"
/translation="MNQEYIKVRGAKEHNLKNINVDIPRNKFVVITGLSGSGKSSLAF
DTIYAEGQRRYVESLSSYARQFLHLQNKPNVESISGLSPAIAIDQKTTSKNPRSTVGT
ITEIYDYLRLLYARVGIPYSPVTSLPIHSQTVAEMVDIINELPKGTKVYLLAPIVRGH
KGEFKREIMNLKKQGFQKLIVNGEVCEIDDLPKLDKNKKHNIEVIVDRIVLDENLGNR
LADSLESSLNLADGITYLEIVELPQAVKSQFEKNQRITFSEKYSCPVSGFQLTEIEPR
IFSFNSPFGACPKCEGIGKEFFFDRDLIVQDQRISIKDGAIVPWGSTSSKFILETLKA
LADHYKFSIEVPFISLSQSVKDILFEGSGEEEIKFEFHDGSKTQIIKQPFAGIIPSLQ
EKDRTIESVLIKEELAKFKSEHKCTACSGFRLKDEALCVKIANLHIGEVAGMSIAALQ
KWFIHLEEKLNQKQLFIAKRILKEINERLKFLMNVGLDYLTLSREAGTLSGGESQRIR
LASQIGSGLSGVLYVLDEPSIGLHQRDNTRLIATLKRLRDLGNTVLVVEHDEETMYEA
DHIIDIGPGAGIHGGRVIAEGNAEKIKHFEESITGRYLSGRQTIKVPSETRVGHDNRA
IELLGAVSNNLDNVDIKIPLGTFTAITGVSGSGKSSLMIHTLYKAALKHLEPTSKVFP
GKYRELKGLEYIDKIIDINQSPIGRTPRSNPATYTGAFTHIRDWFVELPESKARGYKV
GRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVKCDICNGHRYNRETLEIKYKGKSIA
DILMMTVEDAMQFFDKIPLIYEKLITLNEVGLGYIKIGQSATTLSGGEAQRVKLAKEL
SRRSTGKTLYILDEPTTGLHIDDIKKLLKVLHKLVDMGNTVLVIEHNLDVIKTADYII
DVGPEGGDKGGKIVVCGTPTDIAACKESHTGRYLKQYLI"
misc_feature complement(279273..282128)
/gene="uvrA"
/locus_tag="MA5_01130"
/note="excinuclease ABC subunit A; Reviewed; Region: uvrA;
PRK00349"
/db_xref="CDD:234734"
misc_feature complement(<281772..282113)
/gene="uvrA"
/locus_tag="MA5_01130"
/note="ATP-binding cassette domain I of the excision
repair protein UvrA; Region: ABC_UvrA_I; cd03270"
/db_xref="CDD:213237"
misc_feature complement(280368..>280706)
/gene="uvrA"
/locus_tag="MA5_01130"
/note="ATP-binding cassette domain I of the excision
repair protein UvrA; Region: ABC_UvrA_I; cd03270"
/db_xref="CDD:213237"
misc_feature complement(279330..280256)
/gene="uvrA"
/locus_tag="MA5_01130"
/note="ATP-binding cassette domain II of the excision
repair protein UvrA; Region: ABC_UvrA_II; cd03271"
/db_xref="CDD:213238"
gene 282235..282693
/locus_tag="MA5_01135"
/db_xref="GeneID:12007110"
CDS 282235..282693
/locus_tag="MA5_01135"
/note="COG0629 Single-stranded DNA-binding protein"
/codon_start=1
/transl_table=11
/product="single-stranded DNA-binding protein"
/protein_id="YP_005404494.1"
/db_xref="GI:383486814"
/db_xref="GeneID:12007110"
/translation="MAGSLNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRI
TSERKERTEWHRVVIFSEGLVSIVERYVTKGSKLYIEGSLQTRKWNDNSGQEKYTTEV
VLQNFNSQLILLDHKNSNQNTQGSGHHEYKYPETKNHSFDHSDLDDEIPF"
misc_feature 282241..282690
/locus_tag="MA5_01135"
/note="Single-stranded DNA-binding protein [DNA
replication, recombination, and repair]; Region: Ssb;
COG0629"
/db_xref="CDD:223702"
misc_feature 282256..282555
/locus_tag="MA5_01135"
/note="SSB_OBF: A subfamily of OB folds similar to the OB
fold of ssDNA-binding protein (SSB). SSBs bind with high
affinity to ssDNA. They bind to and protect ssDNA
intermediates during DNA metabolic pathways. All bacterial
and eukaryotic SSBs studied to date...; Region: SSB_OBF;
cd04496"
/db_xref="CDD:239942"
misc_feature order(282256..282267,282340..282348,282391..282393,
282397..282399,282463..282465,282490..282492,
282523..282525,282532..282534)
/locus_tag="MA5_01135"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:239942"
misc_feature order(282271..282279,282295..282297,282325..282327,
282346..282351,282385..282390,282394..282396,
282400..282402,282406..282408,282412..282414,
282454..282459,282481..282483,282487..282489,
282493..282498,282535..282537,282541..282543)
/locus_tag="MA5_01135"
/note="ssDNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:239942"
misc_feature order(282463..282465,282469..282471,282475..282477)
/locus_tag="MA5_01135"
/note="tetramer (dimer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:239942"
gene 282818..283639
/locus_tag="MA5_01140"
/db_xref="GeneID:12007111"
CDS 282818..283639
/locus_tag="MA5_01140"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404495.1"
/db_xref="GI:383486815"
/db_xref="GeneID:12007111"
/translation="MTKFVLLVTSILLLGCSTTHDVASRIKHAQEIATQNNFQMRLIN
GGDFTLTTFQRITASHLPFVFYIEGDGHLTDNGIHSNNPTPVNLMLLKLATIDKRLNV
VYIARPCQYTPLEMNSKCISNYWLDKRMGQEVVDSINNVINIINNGQKFSLIGFSGGG
GLAILIAAQNSDVKDIITIAGNLDTEKFDKYHNYRGYLVKSLNPINYAKQVDNIPQLH
LSGMDDKKVPPFIAEQYVKTSNSLCVKQYTLPNISHTKGWDKVWPHILDIPLICN"
gene complement(285590..285666)
/locus_tag="MA5_t04323"
/db_xref="GeneID:12007112"
tRNA complement(285590..285666)
/locus_tag="MA5_t04323"
/product="tRNA-Arg"
/db_xref="GeneID:12007112"
gene 285765..286082
/locus_tag="MA5_01145"
/db_xref="GeneID:12007113"
CDS 285765..286082
/locus_tag="MA5_01145"
/note="COG1872 Uncharacterized conserved protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404496.1"
/db_xref="GI:383486816"
/db_xref="GeneID:12007113"
/translation="MNKFYIYNSFKHEALINVKVKPYAKQNLIGNFVIINNIPYIKLA
IKATPEQGKANEGIIHYLAKEWELSRSSIEIIKGHTHSLKTILIKNINEDYLNLIINA
YIK"
misc_feature 285765..286079
/locus_tag="MA5_01145"
/note="hypothetical protein; Reviewed; Region: PRK01530"
/db_xref="CDD:134567"
gene 286240..288105
/locus_tag="MA5_01150"
/db_xref="GeneID:12007114"
CDS 286240..288105
/locus_tag="MA5_01150"
/note="COG0326 Molecular chaperone, HSP90 family"
/codon_start=1
/transl_table=11
/product="heat shock protein 90"
/protein_id="YP_005404497.1"
/db_xref="GI:383486817"
/db_xref="GeneID:12007114"
/translation="MTQEKKKFDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDK
LRYLSQSNSELIAGDSNFKIIVKVDKDNGQIIIRDNGIGMNKEDLIENLGTIARSGTA
NFLKNLSGDSKKDNMLIGQFGVGFYSSFMVADKVTVTSRKAGESKVHTWESDGLGEYI
VADSEQEFTRGTEIVLYIKKSETTFLDHFRLKHIVKSYSDHIAVPIYFCDEAGNNEIQ
LNSASALWTRPKSEITEDQYKEFYKSLSYAVDDPWVTLHNKNEGAIEFTNLLFIPSSK
TFDLFHPDRKRRVKLYIKRVFISDENIDLIPSYLRFLRGVVDSEDLPLNISRESLQHN
NVLEKIKNAITKRVLGELRKKKEELPEEYNKFWTNFGGALKEGLCEATTDHEKLLEVC
IFRSALHNKMISIDEYIANFKEGQNTIYYLSGDNPDKLLSSPQIEGLLNKNIDVLLFT
DTVDDFWVNVNSEYKGYAIKSATRSDIDVEQTTSQPKDKNTDSKKSDNEYKLLTDYFK
EILGELVKEVKISKKLTLSPACLAVSDTAMDIRMERFLIEQKQIANASAKNLELNPKN
KIIEKIFNDLKANNKNNNELVNLIFDQACILEGEPVADTGAFSKRLNDILQKAIL"
misc_feature 286240..288099
/locus_tag="MA5_01150"
/note="heat shock protein 90; Provisional; Region:
PRK05218"
/db_xref="CDD:179965"
misc_feature 286321..286686
/locus_tag="MA5_01150"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(286336..286338,286348..286350,286357..286359,
286468..286470,286474..286476,286480..286482,
286486..286491,286606..286617,286651..286653,
286657..286659,286672..286677,286681..286683)
/locus_tag="MA5_01150"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 286348..286350
/locus_tag="MA5_01150"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(286480..286482,286486..286488,286606..286608,
286612..286614)
/locus_tag="MA5_01150"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 288268..289512
/locus_tag="MA5_01155"
/db_xref="GeneID:12007115"
CDS 288268..289512
/locus_tag="MA5_01155"
/EC_number="2.3.1.37"
/note="COG0156 7-keto-8-aminopelargonate synthetase and
related enzymes"
/codon_start=1
/transl_table=11
/product="5-aminolevulinate synthase"
/protein_id="YP_005404498.1"
/db_xref="GI:383486818"
/db_xref="GeneID:12007115"
/translation="MSYYDTIFNKHIDKIKSEGRYREFKSLKRQADNFPFAEYEDKQI
VMWCINDYLGMSKHVKVMQASIDALLKYGVGSGGTRNIGGNNISILELEKELADLHSK
ETALVFTSGFVANDTTLASLAKIIPDIVFFSDELNHASIIAGIKSSRAEKYVYRHLDV
QHLEKLLQSVDINKPKIIVFESAYSMDGFFSPIKDIINLAKKYNALTFIDEVHTVGLY
GKQGGGISELLDCSNQIDIIQGTLAKAYGTIGGYITSNYNLIDAIRLTAPGFIFTTSL
PPVISTAATHSIRHLKESNEERIKHQEVVTKLKNSFEHFNIPYLKNESHIIPIIIGDP
IKATKVSNMLLNEYGIYVQHINFPTVPRGTERLRIIPTPAHTDKMINDLSTALVHIFD
ELDIELSSAKELNKEVRLHLIA"
misc_feature 288301..289497
/locus_tag="MA5_01155"
/note="pyridoxal phosphate-dependent acyltransferase,
putative; Region: gly_Cac_T_rel; TIGR01825"
/db_xref="CDD:130884"
misc_feature 288391..289440
/locus_tag="MA5_01155"
/note="KBL_like; this family belongs to the pyridoxal
phosphate (PLP)-dependent aspartate aminotransferase
superfamily (fold I). The major groups in this CD
corresponds to serine palmitoyltransferase (SPT),
5-aminolevulinate synthase (ALAS); Region: KBL_like;
cd06454"
/db_xref="CDD:99747"
misc_feature order(288415..288417,288595..288603,288679..288681,
288808..288810,288820..288825,288895..288897,
288901..288906,288988..288990,288997..288999,
289369..289371)
/locus_tag="MA5_01155"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:99747"
misc_feature order(288595..288603,288679..288681,288808..288810,
288820..288822,288895..288897,288901..288906,
288988..288990,288997..288999)
/locus_tag="MA5_01155"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99747"
misc_feature 288997..288999
/locus_tag="MA5_01155"
/note="catalytic residue [active]"
/db_xref="CDD:99747"
gene 290244..291581
/gene="tig"
/locus_tag="MA5_01160"
/db_xref="GeneID:12007116"
CDS 290244..291581
/gene="tig"
/locus_tag="MA5_01160"
/EC_number="5.2.1.8"
/note="COG0544 FKBP-type peptidyl-prolyl cis-trans
isomerase (trigger factor)"
/codon_start=1
/transl_table=11
/product="trigger factor"
/protein_id="YP_005404499.1"
/db_xref="GI:383486819"
/db_xref="GeneID:12007116"
/translation="MGIIVLKNEGLNFHARISTPLSEIDDDIQKELLDLTKKVKVAGF
RAGKVPVSIVKKKYGTSVRHDIIEKRINNLVNHIIKEYNLNIIGRPKIEELQNEPDKD
LEFTVKIELLPKITIPDLKKISLDRPKLAVNSQDVEIQLEKLAALTKCYTKESKTKIK
DGDQVTIDAIGYIKDRAFDGGKLNDFKVVIGSNTLIQGFEQQLIGSKTGNEVDVNVTF
PENYHDKNLSGKDAHFVVQIKAVHTAEPTIIDEEFAKKFQSNSLEELRTHFAKQIENE
SEEAINTIMKMNLFDKLEKLLDFDVPESLLEQEKNILKSETDKNKHDGSLLNGKSSKE
ITEYYNKLALRRVRIGLLLAEYAKFKNLQLEPDDFKKIIMQQARNFPGQENMIFDFYK
NNPRAIEGLKGPALEDKTVQYIFNNEIQLKEKRYTKEELEKYLETEEQRISLI"
misc_feature 290244..291494
/gene="tig"
/locus_tag="MA5_01160"
/note="trigger factor; Provisional; Region: tig; PRK01490"
/db_xref="CDD:234956"
misc_feature 290709..290960
/gene="tig"
/locus_tag="MA5_01160"
/note="FKBP-type peptidyl-prolyl cis-trans isomerase;
Region: FKBP_C; pfam00254"
/db_xref="CDD:215821"
misc_feature 291024..291491
/gene="tig"
/locus_tag="MA5_01160"
/note="Bacterial trigger factor protein (TF) C-terminus;
Region: Trigger_C; pfam05698"
/db_xref="CDD:218701"
gene complement(291654..292649)
/gene="obgE"
/locus_tag="MA5_01165"
/db_xref="GeneID:12007117"
CDS complement(291654..292649)
/gene="obgE"
/locus_tag="MA5_01165"
/note="COG0536 Predicted GTPase"
/codon_start=1
/transl_table=11
/product="GTPase CgtA"
/protein_id="YP_005404500.1"
/db_xref="GI:383486820"
/db_xref="GeneID:12007117"
/translation="MHFIDEVKIYIKGGNGGNGCISFHREKFIDRGGPDGGDGGFGGS
VIFRSNHHINTLVNYRYQQHFTAENGENGKGSNRSGKSGKSLILDVPVGTQIFSQDGD
ILLYDFTEDEKSFEIIKGGCGGLGNSHFKTSVNQAPRKSTEGEIAEEMWIHLRLKLLS
DVGLIGLPNAGKSTFLSVVTAAKPKIADYPFTTLVPNLGVVYIDDEEFVIADIPGLIA
GAHQGYGLGDKFLKHIERCNVLIHLIDGASNNVIADYNTVRFELESYSDYLKNKIEII
CLNKCDVLVDEEIQKKIKKLQKVTNKVVHPISTYNNQGVNKIVKLALEIIKNQKY"
misc_feature complement(291660..292646)
/gene="obgE"
/locus_tag="MA5_01165"
/note="GTPase CgtA; Reviewed; Region: obgE; PRK12299"
/db_xref="CDD:237048"
misc_feature complement(292176..292643)
/gene="obgE"
/locus_tag="MA5_01165"
/note="GTP1/OBG; Region: GTP1_OBG; pfam01018"
/db_xref="CDD:110047"
misc_feature complement(291672..292172)
/gene="obgE"
/locus_tag="MA5_01165"
/note="Obg GTPase; Region: Obg; cd01898"
/db_xref="CDD:206685"
misc_feature complement(292131..292154)
/gene="obgE"
/locus_tag="MA5_01165"
/note="G1 box; other site"
/db_xref="CDD:206685"
misc_feature complement(order(291723..291728,291804..291806,
291810..291815,292128..292145))
/gene="obgE"
/locus_tag="MA5_01165"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206685"
misc_feature complement(292062..292109)
/gene="obgE"
/locus_tag="MA5_01165"
/note="Switch I region; other site"
/db_xref="CDD:206685"
misc_feature complement(292071..292073)
/gene="obgE"
/locus_tag="MA5_01165"
/note="G2 box; other site"
/db_xref="CDD:206685"
misc_feature complement(292005..292016)
/gene="obgE"
/locus_tag="MA5_01165"
/note="G3 box; other site"
/db_xref="CDD:206685"
misc_feature complement(order(291939..291977,291984..292007))
/gene="obgE"
/locus_tag="MA5_01165"
/note="Switch II region; other site"
/db_xref="CDD:206685"
misc_feature complement(291804..291815)
/gene="obgE"
/locus_tag="MA5_01165"
/note="G4 box; other site"
/db_xref="CDD:206685"
misc_feature complement(291720..291728)
/gene="obgE"
/locus_tag="MA5_01165"
/note="G5 box; other site"
/db_xref="CDD:206685"
gene complement(292958..294268)
/gene="gltA"
/locus_tag="MA5_01170"
/db_xref="GeneID:12007118"
CDS complement(292958..294268)
/gene="gltA"
/locus_tag="MA5_01170"
/EC_number="2.3.3.1"
/note="COG0372 Citrate synthase"
/codon_start=1
/transl_table=11
/product="type II citrate synthase"
/protein_id="YP_005404501.1"
/db_xref="GI:383486821"
/db_xref="GeneID:12007118"
/translation="MTNGNNNNLEFAELKIRGKLFKLPILKASIGKDVIDISRVSAEA
DYFTYDPGFMSTASCQSTITYIDGDKGILWYRGYDIKDLAEKSDFLEVAYLMIYGELP
SSDQYCNFTKKVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLSAFYPDLLNFNE
TDYELTAIRMIAKIPTIAAMSYKYSIGQPFIYPDNSLDFTENFLHMMFATPCTKYKVN
PIIKNALNKIFILHADHEQNASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEA
VINMLKEIGSSENIPKYVAKAKDKNDPFRLMGFGHRVYKSYDPRAAVLKETCKEVLNE
LGQLDNNPLLQIAIELEALALKDEYFIERKLYPNVDFYSGIIYKAMGIPSQMFTVLFA
IARTVGWMAQWKEMHEDPEQKISRPRQLYTGYVHREYKCIVERK"
misc_feature complement(293000..294202)
/gene="gltA"
/locus_tag="MA5_01170"
/note="Escherichia coli (Ec) citrate synthase (CS)
GltA_like. CS catalyzes the condensation of acetyl
coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate
and coenzyme A (CoA), the first step in the citric acid
cycle (TCA or Krebs cycle). The overall CS...; Region:
EcCS_like; cd06114"
/db_xref="CDD:99867"
misc_feature complement(292964..294172)
/gene="gltA"
/locus_tag="MA5_01170"
/note="Citrate synthase [Energy production and
conversion]; Region: GltA; COG0372"
/db_xref="CDD:223449"
misc_feature complement(order(293000..293026,293030..293032,
293330..293335,293447..293452,293456..293473,
293477..293482,293501..293503,293510..293521,
293528..293530,293540..293545,293552..293566,
293816..293824,293831..293833,293840..293842,
293852..293854,293864..293866,293876..293884,
293888..293893,293900..293902,293933..293938,
293945..293950,293957..293959,293963..293974,
293996..293998,294011..294013,294023..294025,
294032..294043,294077..294079,294083..294133))
/gene="gltA"
/locus_tag="MA5_01170"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:99867"
misc_feature complement(order(293021..293023,293030..293032,
293084..293086,293096..293098,293159..293161,
293165..293167,293174..293176,293180..293182,
293309..293311,293324..293326,293333..293356,
293441..293443,293450..293452,293456..293464,
293555..293557,293564..293566,294107..294109))
/gene="gltA"
/locus_tag="MA5_01170"
/note="active site"
/db_xref="CDD:99867"
misc_feature complement(order(293084..293086,293165..293167,
293309..293311,293333..293347,293351..293356,
293459..293464,293555..293557,293564..293566,
294107..294109))
/gene="gltA"
/locus_tag="MA5_01170"
/note="citrylCoA binding site [chemical binding]; other
site"
/db_xref="CDD:99867"
misc_feature complement(order(293684..293686,293750..293752,
293762..293764,293813..293815,293906..293926,
293930..293932))
/gene="gltA"
/locus_tag="MA5_01170"
/note="NADH binding [chemical binding]; other site"
/db_xref="CDD:99867"
misc_feature complement(order(293636..293641,293681..293719,
293867..293884,293891..293917))
/gene="gltA"
/locus_tag="MA5_01170"
/note="cationic pore residues; other site"
/db_xref="CDD:99867"
misc_feature complement(order(293021..293023,293084..293086,
293096..293098,293159..293161,293309..293311,
293336..293338,293456..293461,293555..293557,
293564..293566))
/gene="gltA"
/locus_tag="MA5_01170"
/note="oxalacetate/citrate binding site [chemical
binding]; other site"
/db_xref="CDD:99867"
misc_feature complement(order(293030..293032,293159..293161,
293165..293167,293174..293176,293180..293182,
293324..293326,293333..293335,293339..293356,
293441..293443,293450..293452,293459..293464))
/gene="gltA"
/locus_tag="MA5_01170"
/note="coenzyme A binding site [chemical binding]; other
site"
/db_xref="CDD:99867"
misc_feature complement(order(293159..293161,293336..293338,
293459..293461))
/gene="gltA"
/locus_tag="MA5_01170"
/note="catalytic triad [active]"
/db_xref="CDD:99867"
gene complement(294855..295631)
/locus_tag="MA5_01175"
/db_xref="GeneID:12007119"
CDS complement(294855..295631)
/locus_tag="MA5_01175"
/note="COG1573 Uracil-DNA glycosylase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404502.1"
/db_xref="GI:383486822"
/db_xref="GeneID:12007119"
/translation="MNDMFKWLNAIGVEYYCYEHTPQLKISHNTAITEKKQVKLMHTT
EAVFNNNVHDNITLSRSLADKANNIVELRESLLNFNGCELKKFATNTVFGDGNPQANI
MLIGEAPGNTEDLKGIPFCGESGNLLDNMLYAIGISRNNFYITNMVFWRPPANRQPTL
EEVDICRPFVEKHIALINPKLLILVGSTAATSLLGKNACITKIRQEYYFYTNKYISTP
IQTTAIFHPAYLLRQPMQKRTSWYDLLKIKEYLVNNRVIA"
misc_feature complement(294888..295397)
/locus_tag="MA5_01175"
/note="Family 4 Uracil-DNA glycosylase (UDG), found
exclusively in thermophilic organisms; Region:
UDG_F4_TTUDGA_like; cd10030"
/db_xref="CDD:198428"
misc_feature complement(order(295125..295127,295134..295139,
295182..295190,295368..295370,295377..295382,
295386..295391,295395..295397))
/locus_tag="MA5_01175"
/note="Fe-S cluster binding site [ion binding]; other
site"
/db_xref="CDD:198428"
misc_feature complement(order(294954..294956,295194..295196,
295272..295277,295293..295295,295308..295316))
/locus_tag="MA5_01175"
/note="active site"
/db_xref="CDD:198428"
gene 295648..296589
/locus_tag="MA5_01180"
/db_xref="GeneID:12007120"
CDS 295648..296589
/locus_tag="MA5_01180"
/note="COG0564 Pseudouridylate synthases, 23S
RNA-specific"
/codon_start=1
/transl_table=11
/product="pseudouridylate synthase"
/protein_id="YP_005404503.1"
/db_xref="GI:383486823"
/db_xref="GeneID:12007120"
/translation="MLTYNVPKELNNTRLDKALSLLLKKVSRNQVQKAIKNYCVQVNG
VIISDSDVLVKENDTILFSFKEPEELKITAANITLDIIYEDDDLIVINKAAGMTVHPG
IRHHDNTLVNALLHHTKYLSDIGSAERPGIVHRLDKDTTGLMVVAKNNKTHILLANQI
KQRQVIRKYKALVWGVINPLEGIIKNNVGRNRNNRKKMTILKYGGKKAVTYYKTLELF
YGGTLSMVECKLSTGRTHQIRVQLSNLKHSVVGDQTYGNNNRKIINSPPKLKAKLIAF
KRQALHSWYLSFTHPTSNDIMAFSCELPRDMQEIITD"
misc_feature 295648..296559
/locus_tag="MA5_01180"
/note="Pseudouridylate synthases, 23S RNA-specific
[Translation, ribosomal structure and biogenesis]; Region:
RluA; COG0564"
/db_xref="CDD:223638"
misc_feature 295687..295923
/locus_tag="MA5_01180"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:238095"
misc_feature order(295687..295689,295723..295728,295732..295737,
295741..295746,295753..295758,295762..295764,
295783..295806,295810..295812)
/locus_tag="MA5_01180"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:238095"
misc_feature 295909..296511
/locus_tag="MA5_01180"
/note="Pseudouridine synthase, RsuA/RluD family; Region:
PseudoU_synth_RluCD_like; cd02869"
/db_xref="CDD:211346"
misc_feature order(296047..296058,296362..296364)
/locus_tag="MA5_01180"
/note="active site"
/db_xref="CDD:211346"
gene 297051..298607
/locus_tag="MA5_01185"
/db_xref="GeneID:12007121"
CDS 297051..298607
/locus_tag="MA5_01185"
/EC_number="2.1.1.-"
/note="COG2890 Methylase of polypeptide chain release
factors"
/codon_start=1
/transl_table=11
/product="bifunctional N5-glutamine
S-adenosyl-L-methionine-dependent methyltransferase/tRNA
(m7G46) methyltransferase"
/protein_id="YP_005404504.1"
/db_xref="GI:383486824"
/db_xref="GeneID:12007121"
/translation="MQYSIKQILSNANDKLNKIGINLPGLEARILLQHVTNKPIEHLL
IKLNEQLSEAEIEAFEKLLERRLAHEPIAYIIGVKEFYSREFIVNKHVLIPRIDTEVL
VDVVIGLVVSRNNLHMFSKLKSLDSVLTTQSYNILELGTGSGCIAISLLCELPNTNII
ATDISVDAIKVAKSNSIKYNVTDRIQIIHSNWFEKLDKQKFDFIVSNPPYISHTEKLK
MAIETINYEPSIALFAEEDGLEAYSIIAKNAKQFLKPNGKIILEIGFSQAAKVSKIFL
NYGYNIDYIYRDLQSHNRVIEISPINLNRSYARRIGKSLSKMQQKLLDNELPKYLFSK
EKFKSEKRKVFLEIGFGMGEHLINQAKINPDTLFIGVEVYLNGVANVLKHSAQHNITN
FLLFPNNLDLILNDLPNNSLDGIYILFPDPWIKNKKKKKRIFNKERLKILQNKLKNNG
NLVFASDIENYFYEAMALIRQNGNFEIIHNDDYLQPHDNYIITKYHQKAINANRTAKF
MILQHALTDH"
misc_feature 297051..298550
/locus_tag="MA5_01185"
/note="bifunctional N5-glutamine
S-adenosyl-L-methionine-dependent methyltransferase/tRNA
(m7G46) methyltransferase; Reviewed; Region: PRK01544"
/db_xref="CDD:234958"
misc_feature 297453..297839
/locus_tag="MA5_01185"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(297465..297485,297537..297542,297618..297626,
297669..297671)
/locus_tag="MA5_01185"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
misc_feature 297954..298589
/locus_tag="MA5_01185"
/note="Predicted S-adenosylmethionine-dependent
methyltransferase [General function prediction only];
Region: COG0220"
/db_xref="CDD:223298"
gene complement(298573..299514)
/locus_tag="MA5_01190"
/db_xref="GeneID:12007122"
CDS complement(298573..299514)
/locus_tag="MA5_01190"
/note="COG0009 Putative translation factor (SUA5)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404505.1"
/db_xref="GI:383486825"
/db_xref="GeneID:12007122"
/translation="MINKAVQFIKSGKVVVFPTETVYGIGADATNNEACLKIFQFKNR
PAINPLIVHVTSIVQAKAIGEFNKLAEKIASKFWPGPLSIVVPLKDNVNIAPSVTAGL
NTIALRIPSYPIALALIRQSVVPIAAPSANPSNYISPTNAEHVTKHFKDNREIFILAP
EIYQCEYGLESTIIDTTTVIPTILREGFITSEILEELLGVKILKASEINSIVKAPGML
KKHYSPNVHVRLNAINLNDKEIGLNFGNSNLTGKFALNLSTEGNIIEAAANLYSYLRI
LDDYAVSNDINCIAVAPVPLTNIGAAINDRLKRAAKS"
misc_feature complement(298915..299514)
/locus_tag="MA5_01190"
/note="Putative translation factor (SUA5) [Translation,
ribosomal structure and biogenesis]; Region: SUA5;
COG0009"
/db_xref="CDD:223088"
misc_feature complement(298582..298950)
/locus_tag="MA5_01190"
/note="Putative GTP-binding controlling metal-binding;
Region: SUA5; pfam03481"
/db_xref="CDD:217588"
gene complement(299675..301669)
/gene="glyS"
/locus_tag="MA5_01195"
/db_xref="GeneID:12007123"
CDS complement(299675..301669)
/gene="glyS"
/locus_tag="MA5_01195"
/EC_number="6.1.1.14"
/note="COG0751 Glycyl-tRNA synthetase, beta subunit"
/codon_start=1
/transl_table=11
/product="glycyl-tRNA synthetase subunit beta"
/protein_id="YP_005404506.1"
/db_xref="GI:383486826"
/db_xref="GeneID:12007123"
/translation="MSELLLELFSEEIPAFMQKNAEEGYLKIFTKIFEENEIFAKVQV
FAGPRRITLHATHVPKVILPKEEEIKGPSIEAPEIAINGFCKAHNVSKLDLSTKLRNN
KLYYFFVKKTKERETKEILPKIIIDAINKYSWTKSMFWGCYKIKWIRPLRNILCIFDG
EILPLRFGHLSTNNITYGHRLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVG
LLELANAQNLNIKQDVCLIEEVTGLSEFPVVLLGKIPQKFLELPEEVIVSVMRTHQKY
FCLFDKNGSFAPYFLFVINGRFVNTELIIQGNEKVLSARLADALYFYKNDIAKTLESR
LDKLKSVIFHTKLGSLKEKVDRITDICRYIAPDNIDLIMAAKLCKSDLVSDMVGEFPD
LQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGNATLLALADKLDSLVGLII
VGETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSVIS
FFEERAKFYFKNDYDITLINAVLDLNLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSN
IMGNQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNLLSSLLKPI
TSFFDNVLVNDSDPKIAQNRLSLLQNTCEVFDKVAKFCRL"
misc_feature complement(299678..301633)
/gene="glyS"
/locus_tag="MA5_01195"
/note="glycyl-tRNA synthetase subunit beta; Validated;
Region: glyS; PRK01233"
/db_xref="CDD:179258"
misc_feature complement(299705..299992)
/gene="glyS"
/locus_tag="MA5_01195"
/note="Anticodon-binding domain of class Ia aminoacyl tRNA
synthetases and similar domains; Region:
Anticodon_Ia_like; cl12020"
/db_xref="CDD:212339"
gene complement(301662..302531)
/gene="glyQ"
/locus_tag="MA5_01200"
/db_xref="GeneID:12007124"
CDS complement(301662..302531)
/gene="glyQ"
/locus_tag="MA5_01200"
/EC_number="6.1.1.14"
/note="COG0752 Glycyl-tRNA synthetase, alpha subunit"
/codon_start=1
/transl_table=11
/product="glycyl-tRNA synthetase subunit alpha"
/protein_id="YP_005404507.1"
/db_xref="GI:383486827"
/db_xref="GeneID:12007124"
/translation="MKKLSFQQIILILQNYWQDYGCAILQPYDAHVGAGTFHPATVLR
CLGDKPWFIAYVQPSRRPGDSRYGMHPNRMQHYYQFQVILKPSPDNIQDLYLKSLESL
DLDLKTHDIRFVEDDWESPTLGASGLGWEIWCDGMEVSQFTYMQQIGGIECYPVACEI
TYGLERLALYIQGIDEVKELDWNGQIGEKALKYGEVDFEAERQFSKYNLEFADSEMLL
RRFKDSVEQCERLVKVNLPMPAYDECLKASHYFNQLNALGVISVTERASYVLRVRDLA
RICCIKWLELSSE"
misc_feature complement(301677..302531)
/gene="glyQ"
/locus_tag="MA5_01200"
/note="glycyl-tRNA synthetase subunit alpha; Validated;
Region: glyQ; PRK09348"
/db_xref="CDD:236473"
misc_feature complement(302454..302468)
/gene="glyQ"
/locus_tag="MA5_01200"
/note="motif 1; other site"
/db_xref="CDD:238391"
misc_feature complement(order(302244..302246,302346..302348,
302352..302354,302406..302411,302454..302456,
302460..302465))
/gene="glyQ"
/locus_tag="MA5_01200"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238391"
misc_feature complement(order(302034..302036,302043..302048,
302052..302057,302103..302105,302115..302120,
302283..302291,302295..302297,302301..302303,
302349..302351,302424..302426,302430..302432))
/gene="glyQ"
/locus_tag="MA5_01200"
/note="active site"
/db_xref="CDD:238391"
misc_feature complement(302346..302354)
/gene="glyQ"
/locus_tag="MA5_01200"
/note="motif 2; other site"
/db_xref="CDD:238391"
misc_feature complement(order(302034..302036,302043..302045))
/gene="glyQ"
/locus_tag="MA5_01200"
/note="motif 3; other site"
/db_xref="CDD:238391"
gene complement(302718..303347)
/locus_tag="MA5_01205"
/db_xref="GeneID:12007125"
CDS complement(302718..303347)
/locus_tag="MA5_01205"
/note="COG1636 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404508.1"
/db_xref="GI:383486828"
/db_xref="GeneID:12007125"
/translation="MTEVFEIPNGENKVLLHCCCAPCVGPIMEKMIDSRIEYTLFFYN
PNIHPKKEYELRKNENIKFAKKHNIEFIDADYDPQNWFRRAKGMEFEQERGKRCTMCF
DMRFERTALYAYENGFKVITSSLGISRWKDITQINESGIRAASHYDGVTYWTYNWRKN
GGASRIYEIAKEEHFYKQEFCGCIYSLRDTNAWRVANDRPKIDIGKEYY"
misc_feature complement(302721..303323)
/locus_tag="MA5_01205"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG1636"
/db_xref="CDD:224551"
gene complement(303369..304616)
/locus_tag="MA5_01210"
/db_xref="GeneID:12007126"
CDS complement(303369..304616)
/locus_tag="MA5_01210"
/note="COG0477 Permeases of the major facilitator
superfamily"
/codon_start=1
/transl_table=11
/product="proline/betaine transporter (proP6)"
/protein_id="YP_005404509.1"
/db_xref="GI:383486829"
/db_xref="GeneID:12007126"
/translation="MRKIIIPAMIGNAAEWFDYALYAQFAYIIGQHFFPNSSMRDTLT
FAVFAAGFIVRPLGGIIFGNIGDRLGRRAALVIGIITMTVPTAGIGLLPSYNTIGIAA
PIILTIIRLIQGFSLGGEFSGCISYIVEHAAIEKRGLAGSASFVSMCGGMLLGLLTAS
GFSYFMSDDILFEWGWRVPFIVGLFIGSIGLYIRKNLAESPIYKKAKERGRLARFPLR
ETLTQYPKELMIALGLYITVTAPFYTLTVFIGNFMQTLGYSNQQSTIVNSIILIVMMI
VFPISAYVSDKVGRRPVLICAIILLILLVYPIFVALGSMNITLAIISQVIFAGIIATY
MGPIPTVLVEIFPTRVRFTGVALSYNLAAAIFGGTAPMVAMILTRITGDNYAISYYLI
ALSLLSSIFLKFYKETYKKNLVN"
misc_feature complement(303471..304604)
/locus_tag="MA5_01210"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(303465..304586)
/locus_tag="MA5_01210"
/note="metabolite-proton symporter; Region: 2A0106;
TIGR00883"
/db_xref="CDD:233168"
misc_feature complement(order(303516..303518,303525..303530,
303537..303542,303552..303557,303588..303590,
303597..303602,303612..303614,303621..303626,
303633..303635,303783..303785,303795..303797,
303804..303806,303816..303818,303828..303830,
303867..303869,303876..303881,303888..303893,
303900..303902,304161..304163,304179..304184,
304191..304196,304230..304232,304239..304244,
304251..304256,304263..304268,304428..304433,
304437..304442,304452..304454,304461..304466,
304473..304475,304536..304541,304545..304553,
304560..304562))
/locus_tag="MA5_01210"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(304828..305796)
/locus_tag="MA5_01215"
/db_xref="GeneID:12007127"
CDS complement(304828..305796)
/locus_tag="MA5_01215"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404510.1"
/db_xref="GI:383486830"
/db_xref="GeneID:12007127"
/translation="MNNAIVLNNVNTNLFKKDIINNFVNNLTKSTCSTIANMLAIDYT
LRLNSKPEAEKYIKKCVTRLKSYLGMRVINDDNFSVALELFAIMITYEYENEQNKDNI
LEQSQNVIAANLVEVYFSDAKITSSEKEKIKNIFKTLLKEKNFDKIINYAESHKKLFK
MSVMYAMQKYNNIDQATIYIKKEFNKILDMSLAFTQKCNIFKQTTGKIVGAVCALLVG
AISVATAGAAFSIIIVPTLIFAIRYAPALGEKIGEFILNNDNVIKLEQSNIDEFMKTL
QNNKENLLSQEKVKKIKNNITVVPPTINSKLIKKVVNNKKNIDRIY"
gene complement(305803..306441)
/locus_tag="MA5_01220"
/db_xref="GeneID:12007128"
CDS complement(305803..306441)
/locus_tag="MA5_01220"
/note="COG1474 Cdc6-related protein, AAA superfamily
ATPase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404511.1"
/db_xref="GI:383486831"
/db_xref="GeneID:12007128"
/translation="MFEKYIMYLKNLIFFQFIVYFFFISLTILIIKNFQQEYSKSILD
KQVAQENLTEEVLKLYSVINSKEEILESYKKYVALSVLKNSVSCLNYQELIPRIKSLG
SKYNLVEPIDVSINSVFFKNNVQVIEGENESIHVNNYSINIKYACADFLTFLKIFSEI
YSYMPPNTLISFVRVRNEEVLTPKNIYKLSVNHAPNLIYTKLILYIRELSSK"
gene complement(306605..308167)
/locus_tag="MA5_01225"
/db_xref="GeneID:12007129"
CDS complement(306605..308167)
/locus_tag="MA5_01225"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404512.1"
/db_xref="GI:383486832"
/db_xref="GeneID:12007129"
/translation="MIKINLFMKNISDSIKLHFLTKLKIFSFKREKIVVLLGNKGVFL
STFLNNKLLDQLFIPTQGQIDLTPYKNFLSKFPKSDVYFLLDGSECKMRYDQIPILQS
IVKIDPIEQFIEGYFNKEDIIAHCVYEITTKPSEIWSTLIMSCPFETPLSDIISCIID
KRSLDLKGIHFLTLELKVIINKIVQNIQNDKYNDYFQVCVYVSQTSGIKFIIKHKNNI
ITIRNLDYPFDKTTNYVQGIIEQEIHDFFILFKNYISNLDQRVCIILIVDDELKSLLE
STNFEDRNVIFIPVDNILNKQTLEKERFIDANISRLFLEYKSFPAYNNNLKSIKKLVT
IKDLTFKLYTTLLIVLLLIVCIIKYNTKQNYKDINSINEKYYATNQEYDSIKYKYPYI
KNTTSLADLYVIEKLLETPVPLPFDLLERLIINLNPAFKLEEIKWELTNIDNILLISK
RQLIIKLILKYHTNNLSIDESLKLLDDHMQNIKNKLSHLQIDYVIYKDKILDIFGKLV
IPLSVNVVDYKT"
gene 308358..310991
/gene="alaS"
/locus_tag="MA5_01230"
/db_xref="GeneID:12007130"
CDS 308358..310991
/gene="alaS"
/locus_tag="MA5_01230"
/EC_number="6.1.1.7"
/note="COG0013 Alanyl-tRNA synthetase"
/codon_start=1
/transl_table=11
/product="alanyl-tRNA synthetase"
/protein_id="YP_005404513.1"
/db_xref="GI:383486833"
/db_xref="GeneID:12007130"
/translation="MTKFTTEEVRSKFITYFKANNHTHVPASSLIPDNDPSLMFVNSG
MVQFKNVFTGQEKRSYNKAVTSQKSLRAGGKHNDLEHVGYTARHHTFFEMLGNFSFGD
YFKEQAIYYTWDLLTKEFELPKDKLYVTIYHTDDPAASYWKKIAGLKDDRIIRIKTND
NFWSMGDTGPCGPCSEIFFDHGEEIYGGLPGTKDENCDRFIEIWNMVFMQYEQINKET
RIELPKKSIDTGMGLERMTAVLQHVNNNYDIDLFQEIINFTENIVKIKVDGEAKFSYR
VIADHLRASSFLIADGIIPSNEGRGYVLRRIMRRAMRHAHMLGAKEPLMYKLLPKLVD
LMGNIYPELKIAESFISSILEQEEIRFKTTLERGLKLLTEETKTLTKGSKLSGEVAFK
LYDTYGFPLDLTEDILKNRDITVDHKGFEELMLTQKERARKSWLGSGESKTDQLWFDI
KEQYGSTEFLGYTLNEAECKIIALIKNNNLVDNIQEINTQFLLIANQTPFYGESGGQM
GDIGMIFSQGSEIEVIDTFKYLRSIIVHKCILKKGTINIGENANLNINIRYRQNLRIH
HSATHILHAVLHKILGKQVIQKGSLVTSTYLRFDINHSKAITNQEITLIEDQVNEIIR
NNHEVTTTVMFTEDAIKQGAIALFGEKYDSEVRVVKIGETSLELCCGTHVKRTGDIGS
FKIISESAIAAGVRRIEAVCGEFVIKLIRERDSLLKSIESSFKTNKNELITKVINILE
RNKELEKELEKAHLASLDLSIEQIKKQTKEITGIKLLYKEVGNINNKILRQAAENLTK
KVENLIVVYIAHGVDKLSITVAVSKAITDKFNAGIIAKELSLFLGGSGGGGQASIAQA
GGNDIINLTNINKKLWSLIVT"
misc_feature 308364..310874
/gene="alaS"
/locus_tag="MA5_01230"
/note="alanyl-tRNA synthetase; Reviewed; Region: alaS;
PRK00252"
/db_xref="CDD:178947"
misc_feature 308373..309086
/gene="alaS"
/locus_tag="MA5_01230"
/note="Alanyl-tRNA synthetase (AlaRS) class II core
catalytic domain. AlaRS is a homodimer. It is responsible
for the attachment of alanine to the 3' OH group of ribose
of the appropriate tRNA. This domain is primarily
responsible for ATP-dependent formation of...; Region:
AlaRS_core; cd00673"
/db_xref="CDD:29811"
misc_feature 308427..308441
/gene="alaS"
/locus_tag="MA5_01230"
/note="motif 1; other site"
/db_xref="CDD:29811"
misc_feature order(308508..308510,308514..308516,308568..308570,
308631..308633,308637..308639,308643..308651,
308961..308966,308976..308978,309033..309038,
309048..309053,309060..309062)
/gene="alaS"
/locus_tag="MA5_01230"
/note="active site"
/db_xref="CDD:29811"
misc_feature 308565..308573
/gene="alaS"
/locus_tag="MA5_01230"
/note="motif 2; other site"
/db_xref="CDD:29811"
misc_feature 309045..309062
/gene="alaS"
/locus_tag="MA5_01230"
/note="motif 3; other site"
/db_xref="CDD:29811"
misc_feature 310323..310451
/gene="alaS"
/locus_tag="MA5_01230"
/note="Threonyl and Alanyl tRNA synthetase second
additional domain; Region: tRNA_SAD; smart00863"
/db_xref="CDD:197931"
gene complement(312866..313603)
/gene="truA"
/locus_tag="MA5_01235"
/db_xref="GeneID:12007131"
CDS complement(312866..313603)
/gene="truA"
/locus_tag="MA5_01235"
/EC_number="5.4.99.12"
/note="COG0101 Pseudouridylate synthase"
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine synthase A"
/protein_id="YP_005404514.1"
/db_xref="GI:383486834"
/db_xref="GeneID:12007131"
/translation="MYRYKITIEYLGTHFAGWQRQAGVLSVQQILEEAIYKFSSEQVT
LFGSGRTDAGVHAIGQVAHFDLSKYLEPYKIIKAINYFVRPYDVGVWNCELVSNNFHA
RFSAISRHYIYRIINRTYPSVIDFNRAWWISSPLDILAMQKAAAYLLGKHDFTSFRSS
SCQSKSPIKTLTEINIIKEYEEIKLYISAPSFLHYMVRNIVGSLVLVGKNIWQAEQIK
NVLDARDRKIAGPTAPAFGLYFIKAEY"
misc_feature complement(312869..313603)
/gene="truA"
/locus_tag="MA5_01235"
/note="tRNA pseudouridine synthase A; Validated; Region:
truA; PRK00021"
/db_xref="CDD:234577"
misc_feature complement(312869..313588)
/gene="truA"
/locus_tag="MA5_01235"
/note="Eukaryotic and bacterial pseudouridine synthases
similar to E. coli TruA; Region: PseudoU_synth_EcTruA;
cd02570"
/db_xref="CDD:211337"
misc_feature complement(order(313331..313345,313349..313357,
313364..313366,313577..313579))
/gene="truA"
/locus_tag="MA5_01235"
/note="dimerization interface 3.5A [polypeptide binding];
other site"
/db_xref="CDD:211337"
misc_feature complement(order(313010..313012,313448..313459))
/gene="truA"
/locus_tag="MA5_01235"
/note="active site"
/db_xref="CDD:211337"
gene complement(313700..315607)
/locus_tag="MA5_01240"
/db_xref="GeneID:12007132"
CDS complement(313700..315607)
/locus_tag="MA5_01240"
/note="COG0568 DNA-directed RNA polymerase, sigma subunit
(sigma70/sigma32)"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma factor RpoD"
/protein_id="YP_005404515.1"
/db_xref="GI:383486835"
/db_xref="GeneID:12007132"
/translation="MSNSNIDNDPAKIDSLLKKAKSKKIPVTYDDINKALPLNKNPSI
RQLEEAILKFSDAGVDILESNEDDEIKLDIGMDEEFKLSTNVDNESEDEVEEENIGST
DDPVRLYLKDMGGVDLLTRENEVEIAKRIEEGRKTMTASLCRSPIAMRCFIVWYEDLV
NEKMLLRDLIDLEANMLHDEVHENDEEHNSETEVEEHEDNHLSMSRVETQILHNIIDR
MKKISFICEELLIEAKKCYEESFEPKVLQNSKKYNNNLELLINEVSEIHFNSKRTEEI
LGKMYGINRDLINKETAFLKLAEKYGVTRQNFLDEYIGSVINAAWKEKMLKNKKVAWK
ELITKESDYIDQMINELSVIESNTGLLVNDFKKLVNTIQKSERQTLQAKKDMIEANLR
LVISIAKKYANRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAI
ADQARTIRIPVHMIETINKILRTSRQMLNELGYEPTATEIANRLSMPLDKVRKVMKIA
KEPISLENPVGDDSDGGQLGDFIEDKNAVAPIDAAIQSNLREVTTRVLATLTPREERV
LRMRFGIGMNTDHTLEEVGQQFKVTRERIRQIESKALRKLQHPIRSKKLNSFRNGGKR
GDGNPSDLLEA"
misc_feature complement(313754..315607)
/locus_tag="MA5_01240"
/note="RNA polymerase sigma factor RpoD; Validated;
Region: PRK05658"
/db_xref="CDD:235549"
misc_feature complement(315371..315595)
/locus_tag="MA5_01240"
/note="Sigma-70 factor, region 1.1; Region: Sigma70_r1_1;
pfam03979"
/db_xref="CDD:217827"
misc_feature complement(315200..315301)
/locus_tag="MA5_01240"
/note="Sigma-70 factor, region 1.2; Region: Sigma70_r1_2;
pfam00140"
/db_xref="CDD:201030"
misc_feature complement(314543..>314866)
/locus_tag="MA5_01240"
/note="Sigma-70, non-essential region; Region:
Sigma70_ner; pfam04546"
/db_xref="CDD:203043"
misc_feature complement(314240..314452)
/locus_tag="MA5_01240"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:218138"
misc_feature complement(313979..314215)
/locus_tag="MA5_01240"
/note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539"
/db_xref="CDD:146934"
misc_feature complement(313787..313963)
/locus_tag="MA5_01240"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(313799..313801,313805..313810,
313814..313822,313826..313831,313835..313837,
313865..313870,313898..313900,313928..313930))
/locus_tag="MA5_01240"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene complement(315626..317407)
/gene="dnaG"
/locus_tag="MA5_01245"
/db_xref="GeneID:12007133"
CDS complement(315626..317407)
/gene="dnaG"
/locus_tag="MA5_01245"
/EC_number="2.7.7.-"
/note="COG0358 DNA primase (bacterial type)"
/codon_start=1
/transl_table=11
/product="DNA primase"
/protein_id="YP_005404516.1"
/db_xref="GI:383486836"
/db_xref="GeneID:12007133"
/translation="MRVTQEFYEFLRNRINISDVVRQKLALTRKSSNYVGLCPFHQEK
TPSFTVSDSKRFFYCFGCKASGDVIKFTSNISGLSYNESAIKLANDYGIEIPKLTVKQ
KEFYEESDNILNILELANKFFRTQLTPEILNYLYKRNITETTIKEFSIGFAPRNNKFE
KFFLDKKIDITKLGQAGLIGKCKNGKIYNLFSNRITIPIRNIYNKIVGFGGRVLGNEL
PKYLNSFETIVFQKSDILYGEHKAISSSYKKNRSILVEGYFDVIALHQAGFNEVVASL
GTSVTESHLHKLWRAGDEIILCLDGDNAGIKASIRTINLALPLVNSEKKISFIRLPSG
LDPDDAVNKNGADFFAKLIDKRISLSEMIWHIEYSGKNFRTAEEKANLEKNLKDYCNK
ISDSNLKASYYRFFKDQIWQNLVTKQKKIITPSSNSVLIASSHCYSELEMLEHAFCAL
LIKFPIMFAEKDIRDFILNLNFNNKSLEEFRNWYLNEIIDNKVKENEITAIVEKTSFF
DIFLLLSKADNLFLDISFNKNNIRLDLLWQWLYKKYYLINLQQEYAISINSNHDFEKV
LLYKKEIIKIVNELQVLNESFINQTIT"
misc_feature complement(316178..317404)
/gene="dnaG"
/locus_tag="MA5_01245"
/note="DNA primase, catalytic core; Region: dnaG;
TIGR01391"
/db_xref="CDD:233392"
misc_feature complement(317108..317401)
/gene="dnaG"
/locus_tag="MA5_01245"
/note="CHC2 zinc finger; Region: zf-CHC2; pfam01807"
/db_xref="CDD:110780"
misc_feature complement(316682..317044)
/gene="dnaG"
/locus_tag="MA5_01245"
/note="DNA primase catalytic core, N-terminal domain;
Region: Toprim_N; pfam08275"
/db_xref="CDD:219773"
misc_feature complement(316415..316660)
/gene="dnaG"
/locus_tag="MA5_01245"
/note="TOPRIM_DnaG_primases: The topoisomerase-primase
(TORPIM) nucleotidyl transferase/hydrolase domain found in
the active site regions of proteins similar to Escherichia
coli DnaG. Primases synthesize RNA primers for the
initiation of DNA replication. DnaG...; Region:
TOPRIM_DnaG_primases; cd03364"
/db_xref="CDD:173784"
misc_feature complement(order(316496..316498,316502..316504,
316508..316510,316628..316630,316637..316642))
/gene="dnaG"
/locus_tag="MA5_01245"
/note="active site"
/db_xref="CDD:173784"
misc_feature complement(order(316508..316510,316640..316642))
/gene="dnaG"
/locus_tag="MA5_01245"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:173784"
misc_feature complement(order(316580..316582,316610..316615,
316631..316636))
/gene="dnaG"
/locus_tag="MA5_01245"
/note="interdomain interaction site; other site"
/db_xref="CDD:173784"
gene complement(317412..318026)
/locus_tag="MA5_01250"
/db_xref="GeneID:12007134"
CDS complement(317412..318026)
/locus_tag="MA5_01250"
/note="COG0170 Dolichol kinase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404517.1"
/db_xref="GI:383486837"
/db_xref="GeneID:12007134"
/translation="MKTEDFDFEKKRKIFHISAIIFPMFYLFVPRIAIALLLFIITSI
TLYLDVIRHNNAKIRKFVTRFFSKIIRLKENNGTFALSGISFMMLGFFLTSILFPKNL
VICSWLILIISDCLAALVGIKIGSSLSNGKSIAGSFTFFVSALFISILVYFYLGYNTS
FVIIIISCIGATAVEFYSKYLRINDNLSIPLSYCLSTTIFPYIL"
misc_feature complement(317421..318026)
/locus_tag="MA5_01250"
/note="Dolichol kinase [Lipid metabolism]; Region: SEC59;
COG0170"
/db_xref="CDD:223248"
gene 318297..318785
/gene="greA"
/locus_tag="MA5_01255"
/db_xref="GeneID:12007135"
CDS 318297..318785
/gene="greA"
/locus_tag="MA5_01255"
/note="COG0782 Transcription elongation factor"
/codon_start=1
/transl_table=11
/product="transcription elongation factor GreA"
/protein_id="YP_005404518.1"
/db_xref="GI:383486838"
/db_xref="GeneID:12007135"
/translation="MNTKFPITAKGFKKLEHELKHLKHVERKKISEDIAEAREHGDLS
ENAEYEAAREKQAFIEGRIKELEDMTARAEIIDICKLSGDNIKFGATVTLIDDDTEEE
VTYIIVGEYEADITKKRVSIASPIAKALIGKSVGDFVEVTTPKGLKSYEVVTVEYKEL
DL"
misc_feature 318297..318767
/gene="greA"
/locus_tag="MA5_01255"
/note="transcription elongation factor GreA; Reviewed;
Region: greA; PRK00226"
/db_xref="CDD:234693"
misc_feature 318309..318521
/gene="greA"
/locus_tag="MA5_01255"
/note="Transcription elongation factor, N-terminal;
Region: GreA_GreB_N; pfam03449"
/db_xref="CDD:217565"
misc_feature 318537..318767
/gene="greA"
/locus_tag="MA5_01255"
/note="Transcription elongation factor, GreA/GreB, C-term;
Region: GreA_GreB; pfam01272"
/db_xref="CDD:201702"
gene complement(318858..319256)
/locus_tag="MA5_01260"
/db_xref="GeneID:12007136"
CDS complement(318858..319256)
/locus_tag="MA5_01260"
/note="COG3288 NAD/NADP transhydrogenase alpha subunit"
/codon_start=1
/transl_table=11
/product="NAD(P) transhydrogenase subunit alpha"
/protein_id="YP_005404519.1"
/db_xref="GI:383486839"
/db_xref="GeneID:12007136"
/translation="MNQLPIMAKQAAEIASNAQELSNKLKDLVIDASWQTNTNTIDPL
VFAITIFVLASFVGYYVVWKVTPALHTPLMSITNAISGIIVISSMIAITSSSAFEFSS
LLGSFATLLASINIFGGFIVTTRMLEMFKK"
misc_feature complement(<318861..319256)
/locus_tag="MA5_01260"
/note="NAD/NADP transhydrogenase alpha subunit [Energy
production and conversion]; Region: PntA; COG3288"
/db_xref="CDD:225826"
misc_feature complement(318861..319124)
/locus_tag="MA5_01260"
/note="Domain of unknown function (DUF3814); Region:
DUF3814; pfam12769"
/db_xref="CDD:221763"
gene complement(319231..320382)
/locus_tag="MA5_01265"
/db_xref="GeneID:12007137"
CDS complement(319231..320382)
/locus_tag="MA5_01265"
/note="COG3288 NAD/NADP transhydrogenase alpha subunit"
/codon_start=1
/transl_table=11
/product="NAD(P) transhydrogenase subunit alpha"
/protein_id="YP_005404520.1"
/db_xref="GI:383486840"
/db_xref="GeneID:12007137"
/translation="MKIVALKEKVKNETRTAITPEVAGLLIKKGYAVTVEKDIGLYAG
FLDEEYVAVGTKISSVPLEIISDADIILKVQPSSVTDKYSELEFAKQGAIVVGLLSPY
LNHEYIKAAAKKNLTTFAMEFVPRITKAQNMDALSSQSNLVGYRAVIEASYHYTKAFP
MMITAAGTISACKTLVLGVGVAGLQAIATAKRLGSIVAGYDVRIATKEQVESLGAKFV
SPELQEDLEEESGYASESSADYKAKQEKFLAKIIKGYNIVITTAQIPGKKAPMLVTDK
MIESMMYGSVIVDISTSTGGNVEGSEPDKIVTRHGVTIIGLLNLASKIASDSSKLYSK
NLYNFLTYALQDGQFNMDDELVRDMLITKDGKIVNYIIREKYESITDNG"
misc_feature complement(319288..320382)
/locus_tag="MA5_01265"
/note="Rubrum transdehydrogenase NAD-binding and catalytic
domains; Region: Rubrum_tdh; cd05304"
/db_xref="CDD:240629"
misc_feature complement(319285..320379)
/locus_tag="MA5_01265"
/note="NAD/NADP transhydrogenase alpha subunit [Energy
production and conversion]; Region: PntA; COG3288"
/db_xref="CDD:225826"
misc_feature complement(order(319420..319422,319426..319428,
319504..319506,320089..320091,320158..320160,
320338..320340))
/locus_tag="MA5_01265"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:240629"
misc_feature complement(order(319378..319383,319390..319392,
319402..319407,319531..319536,319804..319809,
319876..319878,319885..319893,319897..319899,
319903..319920,319924..319929,319933..319938,
319945..319950,319957..319962,319987..319992,
320251..320253))
/locus_tag="MA5_01265"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:240629"
misc_feature complement(order(319567..319569,319573..319575,
319594..319602,319651..319653,319684..319686,
319774..319782,319840..319851,319972..319974,
319981..319983,319990..319992,320002..320007))
/locus_tag="MA5_01265"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:240629"
misc_feature complement(order(319741..319752,319756..319761,
319807..319809,319828..319833,319960..319962,
319990..319992,319996..320001))
/locus_tag="MA5_01265"
/note="trimer interface B [polypeptide binding]; other
site"
/db_xref="CDD:240629"
misc_feature complement(order(319795..319797,319801..319803,
319870..319872,319879..319881,319888..319902))
/locus_tag="MA5_01265"
/note="trimer interface A [polypeptide binding]; other
site"
/db_xref="CDD:240629"
gene 320449..321090
/locus_tag="MA5_01270"
/db_xref="GeneID:12007138"
CDS 320449..321090
/locus_tag="MA5_01270"
/note="COG2834 Outer membrane lipoprotein-sorting protein"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein-sorting protein LolA"
/protein_id="YP_005404521.1"
/db_xref="GI:383486841"
/db_xref="GeneID:12007138"
/translation="MKKILFLTVICFCLSSIKAYANNNIHLSEFKNYLRTIKSVAIDF
TQEDSYGKIVKGKLLIQKPYNFRCNYYPPFPLVIIGTKNFVSMYDYDMEQVSRISPSE
NIFNFLLEDNVDFDKDFVFESVINKGNIFNITIYHTRTEKRSEITFNKNIKQIEKLKI
FEDHNIVTITFDKITKVQKFSDDLFKFKNPEIFSPPERLIKSEIEKKYVVSSK"
misc_feature 320449..321021
/locus_tag="MA5_01270"
/note="Outer membrane lipoprotein-sorting protein [Cell
envelope biogenesis, outer membrane]; Region: LolA;
COG2834"
/db_xref="CDD:225390"
misc_feature 320551..321012
/locus_tag="MA5_01270"
/note="Outer membrane lipoprotein carrier protein LolA;
Region: LolA; pfam03548"
/db_xref="CDD:217609"
gene 321240..322865
/locus_tag="MA5_01275"
/db_xref="GeneID:12007139"
CDS 321240..322865
/locus_tag="MA5_01275"
/EC_number="2.7.7.7"
/note="COG2812 DNA polymerase III, gamma/tau subunits"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunits gamma and tau"
/protein_id="YP_005404522.1"
/db_xref="GI:383486842"
/db_xref="GeneID:12007139"
/translation="MRRSDLRSLLLLHKEDRVPLLSAMTKTTSITIIIVLENSSNQYI
PFARKYRPSNFTELQGQEVLVKILSYTILNDRLVGGYLLTGIRGIGKTTSARIIAKAV
NCSALITENTAIKTCEKCTNCVSFNNHNHPDIIEIDAASKTSIDDIRRIIESAEYKPL
QGKHKIFIIDEVHMLSKGAFNALLKTLEEPPPHVIFIFATTEVQKVPSTIISRCQRYD
LRRLSFEEIFKLLQYITKQENLIADVEALRIIAHKSEGSARDAVSILDQAASMSAKSG
NIISPQIINQMLGLVDTSFILEFIENIISRETEKAINLINKLYYGFSINLETFIKSVA
DFIAYLNKVKILPNYSLPIYESFNYRTKSILDKISLPHLSILWQIYNKGVTEIKISYN
QLIETEMLVIKSIYSTSLPLLNDSNANIMNADNSGIKKIEILDFLEYLYKNNEIDIYY
FLLNHTELKKLSDNRLELYSLEVTHKLKKQIEDLLAAFTKEKPEFIVIKEQNKQTLKG
QLINKIETSNDFSLIKKHFPNVKITDILLKIKG"
misc_feature 321345..322856
/locus_tag="MA5_01275"
/note="DNA polymerase III subunits gamma and tau;
Validated; Region: PRK06645"
/db_xref="CDD:180643"
misc_feature 321417..321887
/locus_tag="MA5_01275"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 321492..321515
/locus_tag="MA5_01275"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(321495..321518,321747..321749,321840..321842)
/locus_tag="MA5_01275"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 321735..321752
/locus_tag="MA5_01275"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 321876..321878
/locus_tag="MA5_01275"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 322074..322472
/locus_tag="MA5_01275"
/note="DNA polymerase III subunits gamma and tau domain
III; Region: DNA_pol3_gamma3; pfam12169"
/db_xref="CDD:152604"
gene 322870..323193
/locus_tag="MA5_01280"
/db_xref="GeneID:12007140"
CDS 322870..323193
/locus_tag="MA5_01280"
/note="COG0718 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404523.1"
/db_xref="GI:383486843"
/db_xref="GeneID:12007140"
/translation="MVNFNQFLKQAQSMQKKMQEAQEQMANTRYTGKAGGMLVEIIIT
GKGEVEKISIDESLLKTEEKEMLEDLIKVAFNDAKQKCDEDSQNSLSGALNGMSLPPG
FKIPF"
misc_feature 322870..323178
/locus_tag="MA5_01280"
/note="hypothetical protein; Validated; Region: PRK00153"
/db_xref="CDD:234669"
gene complement(323301..323996)
/locus_tag="MA5_01285"
/db_xref="GeneID:12007141"
CDS complement(323301..323996)
/locus_tag="MA5_01285"
/note="COG3577 Predicted aspartyl protease"
/codon_start=1
/transl_table=11
/product="putative aspartyl protease"
/protein_id="YP_005404524.1"
/db_xref="GI:383486844"
/db_xref="GeneID:12007141"
/translation="MNKRLIKLIFIVCSTVIVTGVLYKYINQNYPKFFKESQNIVSFY
ALLLLLFSIIYSTFSRKEIRRFCFQLAMWAVIFLVIITGYAFRFELHYAYHRVISALI
PSYKWSTEVGEIIIARSGDGHFYINACVNNVKIKFMVDTGASDIALTKEDAQKLGFDL
NKLKYTRTYLTANGENKAAPIILNSVVIGTEFKNIKGHVGLGNLDISLLGMSLLERFK
GFRIDKDLLILNY"
misc_feature complement(323304..323936)
/locus_tag="MA5_01285"
/note="Predicted aspartyl protease [General function
prediction only]; Region: COG3577"
/db_xref="CDD:226106"
misc_feature complement(323355..323633)
/locus_tag="MA5_01285"
/note="Bacterial aspartate proteases, retropepsin-like
protease family; Region: retropepsin_like_bacteria;
cd05483"
/db_xref="CDD:133150"
misc_feature complement(323571..323579)
/locus_tag="MA5_01285"
/note="catalytic motif [active]"
/db_xref="CDD:133150"
misc_feature complement(323577..323579)
/locus_tag="MA5_01285"
/note="Catalytic residue [active]"
/db_xref="CDD:133150"
gene complement(324928..325650)
/locus_tag="MA5_01290"
/db_xref="GeneID:12007142"
CDS complement(324928..325650)
/locus_tag="MA5_01290"
/note="COG1126 ABC-type polar amino acid transport system,
ATPase component"
/codon_start=1
/transl_table=11
/product="glutamine ABC transporter ATP-binding protein"
/protein_id="YP_005404525.1"
/db_xref="GI:383486845"
/db_xref="GeneID:12007142"
/translation="MIILEKVSKHYGKNYAIKNIDLNFTTKETTVIIGPSGSGKTTLL
RILNNLEEPSSGTFLVDQQKLMQKDRRKLCLKVGMVFQNFNLFSHFTVGENLMYTPVN
VLKLPKEQAISMAIELLTKFKLIQKFYAYPTSLSGGQKQRIAIARALMMKPEILLFDE
PTSALDPENIKDVIENINLLKTQMSMVVVTHHLKFAKLIADRIIFMDQGQILANQPAN
EFFKKPASHRARLFLENIGDLM"
misc_feature complement(324943..325650)
/locus_tag="MA5_01290"
/note="ABC-type polar amino acid transport system, ATPase
component [Amino acid transport and metabolism]; Region:
GlnQ; COG1126"
/db_xref="CDD:31323"
misc_feature complement(325018..325647)
/locus_tag="MA5_01290"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(325528..325551)
/locus_tag="MA5_01290"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(325078..325080,325171..325176,
325405..325407,325525..325533,325537..325542))
/locus_tag="MA5_01290"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(325405..325416)
/locus_tag="MA5_01290"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(325219..325248)
/locus_tag="MA5_01290"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(325171..325188)
/locus_tag="MA5_01290"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(325153..325164)
/locus_tag="MA5_01290"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(325072..325092)
/locus_tag="MA5_01290"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene complement(325654..326403)
/locus_tag="MA5_01295"
/db_xref="GeneID:12007143"
CDS complement(325654..326403)
/locus_tag="MA5_01295"
/note="COG1235 Metal-dependent hydrolases of the
beta-lactamase superfamily I"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404526.1"
/db_xref="GI:383486846"
/db_xref="GeneID:12007143"
/translation="MLQVTVLGCGASIGVPVIGCECSTCTSPSKYNKRTRSAIYINDE
NSQILVDFGFDIRNQLLREKINKLDCAILTHGHSDHVNGIDDLRVFTFMQDKPFEIYT
DYNSVAQLHAKFDYLFNLCKLLATKSINFFDKIKINTIEVQFFRQHHGPIDSLGLRIG
DFVYSPDVIGFPPESEKFLKDIKIWILDCMDYRSNPNHAGLDKVLAWREKYNPEEILL
TNMRHTIDYHEIKKVLPNNVKPLYDGYKFMV"
misc_feature complement(325657..326403)
/locus_tag="MA5_01295"
/note="Metal-dependent hydrolases of the beta-lactamase
superfamily I [General function prediction only]; Region:
PhnP; COG1235"
/db_xref="CDD:224156"
misc_feature complement(325666..326400)
/locus_tag="MA5_01295"
/note="putative hydrolase; Provisional; Region: PRK02113"
/db_xref="CDD:179371"
gene 326415..327077
/locus_tag="MA5_01300"
/db_xref="GeneID:12007144"
CDS 326415..327077
/locus_tag="MA5_01300"
/note="COG0671 Membrane-associated phospholipid
phosphatase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404527.1"
/db_xref="GI:383486847"
/db_xref="GeneID:12007144"
/translation="MMLEVFYNFYGLNQEIFLFLNKITNIGFTPYFLKIISFCFNIAN
FALIYILYCIYFYIQLKKIKNDNEQQNKFWHGYNKLVEIGIIYVIFGLIFTTLKFSVN
LPRPYCSLPVNSFVTIINTGNERCLSSFPSSHAALSILLTYFAWNSTRLSIKILMICF
IILVSLSRISLAMHYPSDIIYGIIIAFITIVIGKLIYHIFANNIIRKVGIISYNKYFT
LS"
misc_feature 326661..326948
/locus_tag="MA5_01300"
/note="PAP2_like proteins, a super-family of histidine
phosphatases and vanadium haloperoxidases, includes type 2
phosphatidic acid phosphatase or lipid phosphate
phosphatase (LPP), Glucose-6-phosphatase,
Phosphatidylglycerophosphatase B and bacterial acid...;
Region: PAP2_like; cd01610"
/db_xref="CDD:238813"
misc_feature order(326706..326708,326727..326729,326808..326816,
326916..326918,326934..326936,326946..326948)
/locus_tag="MA5_01300"
/note="active site"
/db_xref="CDD:238813"
gene 327161..328243
/locus_tag="MA5_01305"
/db_xref="GeneID:12007145"
CDS 327161..328243
/locus_tag="MA5_01305"
/note="COG0795 Predicted permeases"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404528.1"
/db_xref="GI:383486848"
/db_xref="GeneID:12007145"
/translation="MLLYRKYFIKNILPLLIIVTFSVTSIVWITQILKLLYLFDKGIK
VIDFFNLVVLVLPTLLFILLPIITVIAVLYIYNNLKVERQLIILQTSGVNNIQLALPA
LYVALTIMLLAYYISSTILPLSHINLKSRLNFIKNNYISSMIEEKTFNKITKNITVFI
DKKLTGNIMNGIIIFDNRNADNPSVVFAGSGTLNIYGNNPIFELNKGLRQEYDANGNL
TQLTFDSLMIKLQNNSSLTSQRTQNNKEANEYYISELLTPSHDLVITKKIKLIAEAHQ
RIIWPLYNFVLPCLALAVFLRYPYSKKTTFMPVLFSALTVLFVTAIHFILQNFASKNL
DFIFACYFNLLVALTIGLYLLVHKRI"
misc_feature 327161..328240
/locus_tag="MA5_01305"
/note="Predicted permeases [General function prediction
only]; Region: COG0795"
/db_xref="CDD:223866"
misc_feature 327176..328225
/locus_tag="MA5_01305"
/note="Predicted permease YjgP/YjgQ family; Region:
YjgP_YjgQ; pfam03739"
/db_xref="CDD:217705"
gene complement(328249..328713)
/locus_tag="MA5_01310"
/db_xref="GeneID:12007146"
CDS complement(328249..328713)
/locus_tag="MA5_01310"
/note="COG2927 DNA polymerase III, chi subunit"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit chi"
/protein_id="YP_005404529.1"
/db_xref="GI:383486849"
/db_xref="GeneID:12007146"
/translation="MQQFSIYHTSNELFLKAILRLIEKCYYSNFKSVILTTDVHQQEM
LNKNLWTYSRKQFIPHGSKFDPQPAKQPIYITDELQNPNNASVLVIISPTDIAKILQV
KEYIKVFKRIIIITDLLENLKELIIKINKFTGQENKIDCFTQNPIGTWNKIA"
misc_feature complement(328252..328713)
/locus_tag="MA5_01310"
/note="DNA polymerase III subunit chi; Provisional;
Region: PRK06646"
/db_xref="CDD:102480"
gene complement(328751..328835)
/locus_tag="MA5_t04325"
/db_xref="GeneID:12007147"
tRNA complement(328751..328835)
/locus_tag="MA5_t04325"
/product="tRNA-Leu"
/db_xref="GeneID:12007147"
gene complement(328976..330127)
/locus_tag="MA5_01315"
/db_xref="GeneID:12007148"
CDS complement(328976..330127)
/locus_tag="MA5_01315"
/note="COG0624 Acetylornithine
deacetylase/Succinyl-diaminopimelate desuccinylase and
related deacylases"
/codon_start=1
/transl_table=11
/product="succinyl-diaminopimelate desuccinylase"
/protein_id="YP_005404530.1"
/db_xref="GI:383486850"
/db_xref="GeneID:12007148"
/translation="MYTHYLKNLVSFKSVTPNSAGAIEYIDDLLKQHSFKTEIKIFGD
SKKEQVTNLYAIFGGNEPNICFVGHVDVVPAGNYEFWHNSNPFKFHEQDGKIYGRGTV
DMKGAIACFLAASLNFIKNNTDFKGSISFLITSDEEGKSKHGTKEMLQYIYDQRYKID
FAVVGEPTCEKEIGDTIKIGRRGSVNFKLNIVGLAGHVAYPHKANNPLPCLIKILNEL
INIKLDEGTEFFQNSNLEVTNIDVDNDTSNTIPASAAAHFNIRFNSLHNVETLRQLIE
QIIKQYCKEYKVDYKLEYSSSAESFIQNPNDNDKIKKFANVIERTLKIKSKFSTSGGT
SDARFVKDYCSLVEFGLLSDMAHKINEYTKISDLQKLYNVYYNFLIEIL"
misc_feature complement(328982..330124)
/locus_tag="MA5_01315"
/note="succinyl-diaminopimelate desuccinylase,
proteobacterial clade; Region: dapE_proteo; TIGR01246"
/db_xref="CDD:162269"
misc_feature complement(328991..330115)
/locus_tag="MA5_01315"
/note="M20 Peptidase proteobacterial DapE encoded
N-succinyl-L,L-diaminopimelic acid desuccinylase; Region:
M20_DapE_proteobac; cd03891"
/db_xref="CDD:193511"
misc_feature complement(order(329057..329059,329630..329632,
329714..329719,329819..329821,329921..329923))
/locus_tag="MA5_01315"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193511"
misc_feature complement(order(329132..329134,329345..329347,
329351..329353,329375..329380,329399..329422,
329426..329428,329471..329473,329480..329485,
329489..329494,329501..329506,329510..329512,
329528..329539,329570..329572))
/locus_tag="MA5_01315"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:193511"
gene complement(330938..331462)
/locus_tag="MA5_01320"
/db_xref="GeneID:12007149"
CDS complement(330938..331462)
/locus_tag="MA5_01320"
/note="COG1434 Uncharacterized conserved protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404531.1"
/db_xref="GI:383486851"
/db_xref="GeneID:12007149"
/translation="MIRKFLLIILAIFTLWVGGFGYYLYLINSYKLNSNTTNAIIVFA
DGGHKIETCMALLKAGYAPILFITGIESTERFKNLLMKHNVIEQQVILAPNKIMSEED
NIKEAINFIVTYNLTLITLVEHNYNIPFMLNKLQKAIPSSNNVYIVPYPVFSKPKYDV
LLKSYHRYLMSIVN"
misc_feature complement(330944..331447)
/locus_tag="MA5_01320"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1434"
/db_xref="CDD:224351"
misc_feature complement(330968..331348)
/locus_tag="MA5_01320"
/note="YdcF-like. YdcF-like is a large family of mainly
bacterial proteins, with a few members found in fungi,
plants, and archaea. Escherichia coli YdcF has been shown
to bind S-adenosyl-L-methionine (AdoMet), but a
biochemical function has not been...; Region: YdcF-like;
cl00630"
/db_xref="CDD:241993"
misc_feature complement(order(331073..331075,331082..331084,
331094..331096,331154..331156,331163..331165))
/locus_tag="MA5_01320"
/note="putative active site [active]"
/db_xref="CDD:99750"
gene complement(331459..332088)
/locus_tag="MA5_01325"
/db_xref="GeneID:12007150"
CDS complement(331459..332088)
/locus_tag="MA5_01325"
/EC_number="2.3.1.181"
/note="COG0321 Lipoate-protein ligase B"
/codon_start=1
/transl_table=11
/product="lipoate-protein ligase B"
/protein_id="YP_005404532.1"
/db_xref="GI:383486852"
/db_xref="GeneID:12007150"
/translation="MIRFITLQNLMDYQVTLKLMEDYVNKVINDNEPEIVYLVEHSEI
YTAGTNYKQEELLNYDDIPVIYTGRGGKFTFHGPGQRVIYPILNLALPNRHKDLKLYI
KMLEEWIINSLNYFGIKGYLIKDKVGIWIKVNKGEFAKIAAIGVRVRKWVTYHGIAIN
ISTDLCKFNGIIPCGLESSLVTSLNQLGIYVEMSEFDKIIQTEFNKIFK"
misc_feature complement(331462..332088)
/locus_tag="MA5_01325"
/note="lipoate-protein ligase B; Provisional; Region:
PRK14347"
/db_xref="CDD:172823"
gene complement(332556..332630)
/locus_tag="MA5_t04327"
/db_xref="GeneID:12007151"
tRNA complement(332556..332630)
/locus_tag="MA5_t04327"
/product="tRNA-Thr"
/db_xref="GeneID:12007151"
gene complement(332785..333120)
/gene="rpsP"
/locus_tag="MA5_01330"
/db_xref="GeneID:12007152"
CDS complement(332785..333120)
/gene="rpsP"
/locus_tag="MA5_01330"
/note="COG0228 Ribosomal protein S16"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S16"
/protein_id="YP_005404533.1"
/db_xref="GI:383486853"
/db_xref="GeneID:12007152"
/translation="MAVKIRLARGGAKKRPFYRVVIANATAPRDGDFLEKVGTYNPML
ASDNSERVILKKDRIEYWLGTGAKPTERVAKFIEKAGVTLPKKVKKEMEVKAKNRKVR
PSKKQSKES"
misc_feature complement(332890..333117)
/gene="rpsP"
/locus_tag="MA5_01330"
/note="30S ribosomal protein S16; Reviewed; Region: rpsP;
PRK00040"
/db_xref="CDD:234588"
gene complement(333125..333295)
/gene="rpmG"
/locus_tag="MA5_01335"
/db_xref="GeneID:12007153"
CDS complement(333125..333295)
/gene="rpmG"
/locus_tag="MA5_01335"
/note="COG0267 Ribosomal protein L33"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L33"
/protein_id="YP_005404534.1"
/db_xref="GI:383486854"
/db_xref="GeneID:12007153"
/translation="MAKKNKNVLVRLVSTAGTGVFWVKKRNPRTQTEKLSFRKYDKVV
RKHVLFKEEKIK"
misc_feature complement(333134..333295)
/gene="rpmG"
/locus_tag="MA5_01335"
/note="ribosomal protein L33, bacterial type; Region:
rpmG_bact; TIGR01023"
/db_xref="CDD:233236"
gene complement(333433..335220)
/gene="mutL"
/locus_tag="MA5_01340"
/db_xref="GeneID:12007154"
CDS complement(333433..335220)
/gene="mutL"
/locus_tag="MA5_01340"
/note="COG0323 DNA mismatch repair enzyme (predicted
ATPase)"
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein"
/protein_id="YP_005404535.1"
/db_xref="GI:383486855"
/db_xref="GeneID:12007154"
/translation="MTIKFLSESTINRIAAGEVIERPASVVKELVENAIDGGSTKIDI
ILERAGKNLIIVSDDGIGMTDKELEIAVKRHTTSKLNESDFFNIHTFGFRGEALASIA
AISKMLITSKKREADKAFQIKLIGGNKQQITVSVHNEGTKIEVRDLFFATPARLKFLR
SDKTELAASIDIVKKIALAHPRISFNLIHDNKNLLKLKGQNKDSETNLKQRIIDVIGD
VFIKNAAYIDFKTPDFSICGYTSIPTYNKASSEDQFLFINNRPIKDKLLQVALRVAYQ
DYLARDRYALCVIFLQIDPQLVDVNVHPAKAEVRFHDPNYVRNILIEAIKNALTNKSQ
ITATTIGSDKNSLVNKEPTIHKATNVNSKASEYTSFNFKRNTAYHTLPYGKIEQEVGK
CIEHNNQSHKQYKFGVAKAQLHTTYIISQTEDSIVIIDQHAAYERLGYAKIKYCLKNG
ELVKQRLLIPEIVELSSQKKADCLYENREKLFKLSLTIEKFGEKSIIVTEIPNILGDV
NVQKLIQDLADHLSDFAKNMPLKELIEHVIKIYICHYSIRAARKLSADEMNSLLRQME
NMSFSAQCNNNRPTYIELKLKDIELLFRL"
misc_feature complement(333439..335220)
/gene="mutL"
/locus_tag="MA5_01340"
/note="DNA mismatch repair protein; Reviewed; Region:
mutL; PRK00095"
/db_xref="CDD:234630"
misc_feature complement(334783..335154)
/gene="mutL"
/locus_tag="MA5_01340"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature complement(order(334792..334794,334798..334803,
334816..334818,334819..334821,334927..334938,
335032..335037,335041..335043,335047..335049,
335053..335055,335113..335115,335122..335124,
335134..335136))
/gene="mutL"
/locus_tag="MA5_01340"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(335122..335124)
/gene="mutL"
/locus_tag="MA5_01340"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(order(334930..334932,334936..334938,
335035..335037,335041..335043))
/gene="mutL"
/locus_tag="MA5_01340"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
misc_feature complement(334234..334599)
/gene="mutL"
/locus_tag="MA5_01340"
/note="MutL_Trans: transducer domain, having a ribosomal
S5 domain 2-like fold, conserved in the C-terminal domain
of DNA mismatch repair (MutL/MLH1/PMS2) family. This
transducer domain is homologous to the second domain of
the DNA gyrase B subunit, which is...; Region: MutL_Trans;
cd00782"
/db_xref="CDD:238405"
misc_feature complement(334303..334305)
/gene="mutL"
/locus_tag="MA5_01340"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238405"
misc_feature complement(333562..334005)
/gene="mutL"
/locus_tag="MA5_01340"
/note="MutL C terminal dimerisation domain; Region:
MutL_C; pfam08676"
/db_xref="CDD:219965"
gene complement(335217..335369)
/locus_tag="MA5_01345"
/db_xref="GeneID:12007155"
CDS complement(335217..335369)
/locus_tag="MA5_01345"
/note="COG4391 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404536.1"
/db_xref="GI:383486856"
/db_xref="GeneID:12007155"
/translation="MEIVNSLDVSVSCHGKEPLYGHPKVYLEIDKEKNEIICPYCSKK
FKLVTK"
misc_feature complement(335223..>335369)
/locus_tag="MA5_01345"
/note="Zinc-finger domain; Region: zf-CHCC; cl01821"
/db_xref="CDD:242728"
gene 336346..337617
/locus_tag="MA5_01350"
/db_xref="GeneID:12007156"
CDS 336346..337617
/locus_tag="MA5_01350"
/note="COG0477 Permeases of the major facilitator
superfamily"
/codon_start=1
/transl_table=11
/product="proline/betaine transporter"
/protein_id="YP_005404537.1"
/db_xref="GI:383486857"
/db_xref="GeneID:12007156"
/translation="MNRSKLIFLSAISGNVLEYYDFTVYSVFSLIIGQIFFPGESEFI
RILLSLGVFAVGFLTRPIGGILFGYIGDRYGRRVALIISMLGMTIPTFIMGLIPSYAS
IGIYAPITLVIMRLIQGLCISGEGTGAAIFILEHRQNLRHGFTAGLVHGSNIAGTLIA
TFIGIIIERYFSYIDFAWRFAFLLGGLMGFAGFYFRLRVSETPIFKMIEKKKQVLKAP
FSNVIRTAWISMFLTICIGAIASSVMYLVKTYINVFYYNVMHLSNTIALSYLAYSSFV
AMIAMPLAGGTADIIGKFKMAMLVGVAILILILPTMLLMSAKEMWQQIIALTILGILA
GSIAGTAYIFVISLFTAEQRFTGVAFSYNFAIAIFGGTSPIISRWLVEHTGLFYAPAF
YIMIIAIIFLIIMYTMKKVIKSLLNNYEHRK"
misc_feature 336367..>337254
/locus_tag="MA5_01350"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 336385..337500
/locus_tag="MA5_01350"
/note="metabolite-proton symporter; Region: 2A0106;
TIGR00883"
/db_xref="CDD:188094"
misc_feature order(336409..336411,336418..336426,336430..336435,
336502..336504,336511..336516,336523..336525,
336535..336540,336544..336549,336709..336714,
336721..336726,336733..336738,336745..336747,
336781..336786,336793..336798,336814..336816,
337066..337068,337075..337080,337087..337092,
337099..337101,337141..337143,337153..337155,
337165..337167,337174..337176,337186..337188)
/locus_tag="MA5_01350"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 337601..338440
/locus_tag="MA5_01355"
/db_xref="GeneID:12007157"
CDS 337601..338440
/locus_tag="MA5_01355"
/EC_number="1.3.3.3"
/note="COG0408 Coproporphyrinogen III oxidase"
/codon_start=1
/transl_table=11
/product="coproporphyrinogen III oxidase"
/protein_id="YP_005404538.1"
/db_xref="GI:383486858"
/db_xref="GeneID:12007157"
/translation="MNTENKEITSNWFTNLRDLLCKEFEKIEEKYAQIKGLKPAKFVR
TSWKRNGGGCGIMSLMKGEVFEKVGVNISTVFGEFSQEFRSEILGAELDGKFFATGIS
VVAHLKSPLIPAMHFNTRYIETSKNWFGGGGDLTPFYPEENETAKFHTAFKEACDKYD
SSYYPKFKKQCDEYFYLRHRKEPRGVGGIFYDYLNSGNFEQDFAFTKDIGKALLSVYP
EIVRSKLFLPWTAEQKEYQLIRRGRYVEFNLLYDRGTKFGLMTDGNVEAILMSLPPVV
KFN"
misc_feature 337601..338437
/locus_tag="MA5_01355"
/note="Coproporphyrinogen III oxidase [Coenzyme
metabolism]; Region: HemF; COG0408"
/db_xref="CDD:223485"
misc_feature 337619..338431
/locus_tag="MA5_01355"
/note="Coproporphyrinogen III oxidase; Region:
Coprogen_oxidas; pfam01218"
/db_xref="CDD:216370"
gene complement(339054..339491)
/locus_tag="MA5_01360"
/db_xref="GeneID:12007158"
CDS complement(339054..339491)
/locus_tag="MA5_01360"
/note="COG1981 Predicted membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404539.1"
/db_xref="GI:383486859"
/db_xref="GeneID:12007158"
/translation="MESYYLWFKSAHLISAICWMAGLLYLPRIYVYHTKAKIGSELDS
TLQVMELKLLRFIMNPAMISTFIFGLINAHIYGFVALDTWFQFKMFAVLILVIFHGLL
ARWRKDFAKGKNVHSKKFYRIVNEIPAICMVIAVIMVIVKPFD"
misc_feature complement(339057..339482)
/locus_tag="MA5_01360"
/note="TIGR00701 family protein; Region: TIGR00701"
/db_xref="CDD:162002"
gene complement(339517..340557)
/gene="hemH"
/locus_tag="MA5_01365"
/db_xref="GeneID:12007159"
CDS complement(339517..340557)
/gene="hemH"
/locus_tag="MA5_01365"
/EC_number="4.99.1.1"
/note="COG0276 Protoheme ferro-lyase (ferrochelatase)"
/codon_start=1
/transl_table=11
/product="ferrochelatase"
/protein_id="YP_005404540.1"
/db_xref="GI:383486860"
/db_xref="GeneID:12007159"
/translation="MLGYMNKRIAIVLFNLGGPEDIEYVKPFLFNLFYDKAIINLPNP
LRYIIAKIISITREKKSQKIYSLIGSKSYLIQETEKQKLAITEKLKELIKEDFIIFIN
MRYSTPFAKEVIGQIKEYNPSEIILLPLYPQFSSTTTGSSVKNFLQNIDIDIPIKTIC
CYPIEEDFIKAHVSIIKEKLYDKNFRILFSAHGLPKRIIKAGDPYSFQIKETVNKIVK
ELNIKDLDYKITYQSRVGPIEWLKPNTEDEIELAGKLKKDIIIVPISFVSEHVETLVE
LDIEYKLIADKYKIQYTRIPTLGTNKIFINSLTNILLRFINNTNTNLVMSSSSKRICP
NKFTKCLCNLTN"
misc_feature complement(339580..340548)
/gene="hemH"
/locus_tag="MA5_01365"
/note="ferrochelatase; Reviewed; Region: hemH; PRK00035"
/db_xref="CDD:178811"
misc_feature complement(340069..340533)
/gene="hemH"
/locus_tag="MA5_01365"
/note="Ferrochelatase, N-terminal domain: Ferrochelatase
(protoheme ferrolyase or HemH) is the terminal enzyme of
the heme biosynthetic pathway. It catalyzes the insertion
of ferrous iron into the protoporphyrin IX ring yielding
protoheme. This enzyme is...; Region: Ferrochelatase_N;
cd03411"
/db_xref="CDD:48638"
misc_feature complement(order(340069..340071,340075..340077,
340150..340161,340168..340170,340315..340317,
340327..340329,340354..340356,340366..340368,
340513..340515))
/gene="hemH"
/locus_tag="MA5_01365"
/note="C-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:48638"
misc_feature complement(order(340144..340149,340456..340464,
340474..340476,340510..340512))
/gene="hemH"
/locus_tag="MA5_01365"
/note="active site"
/db_xref="CDD:48638"
misc_feature complement(339661..340050)
/gene="hemH"
/locus_tag="MA5_01365"
/note="Ferrochelatase, C-terminal domain: Ferrochelatase
(protoheme ferrolyase or HemH) is the terminal enzyme of
the heme biosynthetic pathway. It catalyzes the insertion
of ferrous iron into the protoporphyrin IX ring yielding
protoheme. This enzyme is...; Region: Ferrochelatase_C;
cd00419"
/db_xref="CDD:73203"
misc_feature complement(order(339742..339744,339838..339840,
339967..339969,339982..339984))
/gene="hemH"
/locus_tag="MA5_01365"
/note="active site"
/db_xref="CDD:73203"
misc_feature complement(order(339661..339663,339733..339735,
339745..339747,339751..339759,339763..339765,
339922..339924,339934..339936,339943..339951))
/gene="hemH"
/locus_tag="MA5_01365"
/note="N-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:73203"
gene complement(340514..341551)
/gene="hemE"
/locus_tag="MA5_01370"
/db_xref="GeneID:12007160"
CDS complement(340514..341551)
/gene="hemE"
/locus_tag="MA5_01370"
/EC_number="4.1.1.37"
/note="COG0407 Uroporphyrinogen-III decarboxylase"
/codon_start=1
/transl_table=11
/product="uroporphyrinogen decarboxylase"
/protein_id="YP_005404541.1"
/db_xref="GI:383486861"
/db_xref="GeneID:12007160"
/translation="MKQILNPLKNSNKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCY
DVNKATEVTLQPIRRYGLDAAIIFSDILVLPNALGWEVDFKENIGPVLKQFKSQKDFQ
YLQRDSNNKLEKVYKIIKKVKEKLPSNTSLIGFAGSPWTVMSYMLEGKGKRDFRTSKK
FIYENKILAKDLLNFITEKTSDYLINQVKSGVDLLKIFDSWSGVLAEDDFTEFVIEPT
KKIILKVKEVFVKTPIITFPKGAGLLYEKFIEEVPIDILAVDQMVPLEKMKEWSNKVI
IQGNLDPVILLTNKEIIKEKTYKILQAMKGKNFIFNLGHGILPETHPENVEFLTQYVR
LYEQKNSNSTF"
misc_feature complement(340550..341518)
/gene="hemE"
/locus_tag="MA5_01370"
/note="Uroporphyrinogen decarboxylase (URO-D) is a dimeric
cytosolic enzyme that decarboxylates the four acetate side
chains of uroporphyrinogen III (uro-III) to create
coproporphyrinogen III, without requiring any prosthetic
groups or cofactors. This reaction...; Region: URO-D;
cd00717"
/db_xref="CDD:238368"
misc_feature complement(order(340607..340609,340841..340843,
340949..340954,340958..340960,341099..341101,
341117..341119,341147..341149,341285..341287,
341300..341302,341336..341356,341435..341437,
341453..341455,341465..341467,341480..341497))
/gene="hemE"
/locus_tag="MA5_01370"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238368"
misc_feature complement(order(340607..340609,340952..340954,
341117..341119,341342..341344,341480..341482,
341492..341494))
/gene="hemE"
/locus_tag="MA5_01370"
/note="active site"
/db_xref="CDD:238368"
gene 341937..342758
/locus_tag="MA5_01375"
/db_xref="GeneID:12007161"
CDS 341937..342758
/locus_tag="MA5_01375"
/note="COG1806 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="PEP synthetase regulatory protein"
/protein_id="YP_005404542.1"
/db_xref="GI:383486862"
/db_xref="GeneID:12007161"
/translation="MTKLIIHLVSDSSVQTAKHAANSALAQFTSIKQKLYHWPMIRNC
ELLNEVLSKIESKHGIVLYTIADQELRKTLTKFCYELKIPCISVIGKIIKEMSVFSGI
EIEKEQNYNYKFDKTYFDTLNAIDYAIRHDDGQMINELSESDIILIGPSRTSKTPTSV
FLAYNGLKAANIPYVYNCPFPDFIEKDIDQLVVGLVINPNRLIEIREARLNLLQINEN
KSYTDFNIVQRECIEVRKICNQRNWPVIDVSTRSIEETAALIMRIYYNRKNKYHK"
misc_feature 341937..342749
/locus_tag="MA5_01375"
/note="PEP synthetase regulatory protein; Provisional;
Region: PRK05339"
/db_xref="CDD:180026"
gene 342917..343234
/locus_tag="MA5_01380"
/db_xref="GeneID:12007162"
CDS 342917..343234
/locus_tag="MA5_01380"
/note="COG0526 Thiol-disulfide isomerase and thioredoxins"
/codon_start=1
/transl_table=11
/product="thioredoxin"
/protein_id="YP_005404543.1"
/db_xref="GI:383486863"
/db_xref="GeneID:12007162"
/translation="MVNNVTDSSFKNEVLESDLPVMVDFWAEWCGPCKMLIPIIDEIS
KELQDKVKVLKMNIDENPKTPSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWIN
KSI"
misc_feature 342950..343222
/locus_tag="MA5_01380"
/note="TRX family; composed of two groups: Group I, which
includes proteins that exclusively encode a TRX domain;
and Group II, which are composed of fusion proteins of TRX
and additional domains. Group I TRX is a small ancient
protein that alter the redox...; Region: TRX_family;
cd02947"
/db_xref="CDD:239245"
misc_feature order(343004..343006,343013..343015)
/locus_tag="MA5_01380"
/note="catalytic residues [active]"
/db_xref="CDD:239245"
gene 343245..344003
/locus_tag="MA5_01385"
/db_xref="GeneID:12007163"
CDS 343245..344003
/locus_tag="MA5_01385"
/note="COG1134 ABC-type polysaccharide/polyol phosphate
transport system, ATPase component"
/codon_start=1
/transl_table=11
/product="O-antigen export system ATP-binding protein RFBE
(rfbE)"
/protein_id="YP_005404544.1"
/db_xref="GI:383486864"
/db_xref="GeneID:12007163"
/translation="MLLNHSKVFIEITDGYVEGIDVHKRAQGLKHFFLKKGVSLSPTI
PILNNINFSCYEGEKIAFIGSNGSGKSSLLKLIAGIYPLKSGIVKVHGDIAAIIDMGV
GFEQEQTGRENIKMLMLYNNMLDKYSKKIEKEIIDFSELGSKIDLPIKIYSSGMLSRL
AFSVSIFQNPQILLLDEVFAAGDSYFIEKSLNLMKNKFKNTPISIIVSHQEEIIKDNC
DRCILLKDGHIIDDGTPSEIFKIYKQQSNKEIHK"
misc_feature 343245..344000
/locus_tag="MA5_01385"
/note="ABC-type polysaccharide/polyol phosphate transport
system, ATPase component [Carbohydrate transport and
metabolism / Cell envelope biogenesis, outer membrane];
Region: TagH; COG1134"
/db_xref="CDD:224057"
misc_feature 343272..343943
/locus_tag="MA5_01385"
/note="ATP-binding cassette component of polysaccharide
transport system; Region: ABC_KpsT_Wzt; cd03220"
/db_xref="CDD:213187"
misc_feature 343434..343457
/locus_tag="MA5_01385"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213187"
misc_feature order(343443..343448,343452..343460,343662..343664,
343770..343775,343869..343871)
/locus_tag="MA5_01385"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213187"
misc_feature 343653..343664
/locus_tag="MA5_01385"
/note="Q-loop/lid; other site"
/db_xref="CDD:213187"
misc_feature 343698..343727
/locus_tag="MA5_01385"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213187"
misc_feature 343758..343775
/locus_tag="MA5_01385"
/note="Walker B; other site"
/db_xref="CDD:213187"
misc_feature 343782..343793
/locus_tag="MA5_01385"
/note="D-loop; other site"
/db_xref="CDD:213187"
misc_feature 343857..343877
/locus_tag="MA5_01385"
/note="H-loop/switch region; other site"
/db_xref="CDD:213187"
gene 344000..344776
/locus_tag="MA5_01390"
/db_xref="GeneID:12007164"
CDS 344000..344776
/locus_tag="MA5_01390"
/note="COG1682 ABC-type polysaccharide/polyol phosphate
export systems, permease component"
/codon_start=1
/transl_table=11
/product="O-antigen export system permease RFBA (rfbA)"
/protein_id="YP_005404545.1"
/db_xref="GI:383486865"
/db_xref="GeneID:12007164"
/translation="MIKYFFSKKYWRAIALLVKASIVRQNKDSFLGSLWSLIQPFIHI
IVISYFFGFLLRQPREFMVMNLVGGIPLWSFIVSSLTICASSLVTRDQIIKKVRISKT
FFPIADSLGQLYTLICSFSAMYFAFILLFPEKFSWQIIFMPILILPLVICVISGSIAV
AFLTPYIRDIPQMLNVILGVIYWSIPIVYPYSLIPESKKIYFEFNPFFLVIRPVQVLV
INGSLPDMMLIIKSVIVAFITVFISYLIYRQFSKRVIYYL"
misc_feature 344000..344773
/locus_tag="MA5_01390"
/note="ABC-type polysaccharide/polyol phosphate export
systems, permease component [Carbohydrate transport and
metabolism / Cell envelope biogenesis, outer membrane];
Region: TagG; COG1682"
/db_xref="CDD:224596"
misc_feature 344033..344647
/locus_tag="MA5_01390"
/note="ABC-2 type transporter; Region: ABC2_membrane;
cl17235"
/db_xref="CDD:247789"
gene 344773..347814
/locus_tag="MA5_01395"
/db_xref="GeneID:12007165"
CDS 344773..347814
/locus_tag="MA5_01395"
/note="COG0493 NADPH-dependent glutamate synthase beta
chain and related oxidoreductases"
/codon_start=1
/transl_table=11
/product="putative bifunctional glutamate synthase subunit
beta/2-polyprenylphenol hydroxylase"
/protein_id="YP_005404546.1"
/db_xref="GI:383486866"
/db_xref="GeneID:12007165"
/translation="MKLGFNLDFNELDLTGLKKLDQIFLDYLFKADKSLHKDLMLFRS
TPLSIIPQDYSKFLLKISPHLDDFLAELFCISKEVTISRLKHKDFDIIYECKRKFVQR
VAVKKYPLEKIKDIDFEDVYLKITNLIGTNFTSREFAKQIVIWQQDEESFSLELDIAA
RYAAYRVFSYYNSLSSWNKNLFLQNDILFNLQQKLDKKNLIDEKKILKYQKNERVDFD
YKDSFFNLDEALNNSHYCIYCHKRDKDSCSKGFDVIPHFDRVISVDKIPRLSYRMTTG
CPLKQKISEMNYIKAQGFNLAALAIIVIDNPMVAATGHRICNDCSKACIYQKQDPVNI
PLIESNILEETLKLPYGLEIYILLTRWNPLNIYAPLPKEPTNYNILVTGLGPAGFSLS
YYLLRSGHNVTAIDGLKITPLSFNIHKPVKFWHEYKNLLSERIPKGFGGVAEYGITIR
WDKNNLDILRLILERNNNFKYYDGVALGFNITKEQALDLSFDHVAFCIGAGKPKILNI
ENFEAKGVRTASDFLMTLQNGGAFLQNSNTNMMIRMPIVIIGGGLTSLDVATESLFYY
KKQVEEFAKNYIEKDLTEEDKEIAEEFIAHAKLFKEAKNNEELKKVFNKLGGATVYYR
GRLQDSPAYKLNHEELIYTLALGVNFKENMQPLRINIDKYGHVESVEFSITTWLDRRT
HKKYHINMCPTVKPSSNTVLIKTKTVIMAIGIENNTQFDYDKYSYFGDCNPKYFGSVV
KAITSAKEGYEVINKRLIDNVPSFKGSYACFITQLDYLLTSRINKINILNDKTFELII
HSPLAAKNFQFGQFFRLQNYSKDITKLIEPVALSPADIDIEKGLISFIVYEVGKSTSL
CKTLSENEKVVLMGPTGSPLEIPQNKKIIIIDSKYRNVGLLKILKENKNKVIFATYPD
IKKHKLTSVDIVIINTSPEIAEELQELKIFGENTELIINVNSLMQCMMKGICGQCIQK
VKGKQKYIFACSEQNQNVEIIDFKSLKTRLRQNSLQEKMSN"
misc_feature 344773..347811
/locus_tag="MA5_01395"
/note="putative bifunctional glutamate synthase subunit
beta/2-polyprenylphenol hydroxylase; Validated; Region:
PRK06567"
/db_xref="CDD:168614"
misc_feature 347119..347736
/locus_tag="MA5_01395"
/note="FAD/NAD binding domain (electron transfer subunit)
of dihydroorotate dehydrogenase-like proteins.
Dihydroorotate dehydrogenases (DHODs) catalyze the only
redox reaction in pyrimidine de novo biosynthesis. They
catalyze the oxidation of (S)-dihydroorotate...; Region:
DHOD_e_trans_like; cd06192"
/db_xref="CDD:99789"
misc_feature order(347251..347253,347257..347268,347308..347316,
347332..347340,347443..347445,347638..347643)
/locus_tag="MA5_01395"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99789"
misc_feature order(347257..347259,347263..347268)
/locus_tag="MA5_01395"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99789"
misc_feature order(347329..347331,347338..347340,347347..347349,
347359..347361,347383..347385,347389..347391)
/locus_tag="MA5_01395"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99789"
misc_feature order(347428..347430,347440..347451,347455..347457)
/locus_tag="MA5_01395"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99789"
misc_feature order(347443..347448,347560..347565)
/locus_tag="MA5_01395"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99789"
misc_feature order(347650..347652,347668..347670,347677..347679,
347719..347721)
/locus_tag="MA5_01395"
/note="Iron coordination center [ion binding]; other site"
/db_xref="CDD:99789"
gene complement(348164..348958)
/locus_tag="MA5_01400"
/db_xref="GeneID:12007166"
CDS complement(348164..348958)
/locus_tag="MA5_01400"
/EC_number="2.3.1.129"
/note="COG1043 Acyl-[acyl carrier
protein]--UDP-N-acetylglucosamine O-acyltransferase"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylglucosamine acyltransferase"
/protein_id="YP_005404547.1"
/db_xref="GI:383486867"
/db_xref="GeneID:12007166"
/translation="MSNSNIHTTAIIAEGAKFGKNVKVGPYCIIGPEVVLHDNVELKS
HVVIDGITEIGENTVIYPFASIGQPPQILKYANERSSTIIGSNNTIREYVTVQAGSKS
GGMITRVGNNNLFMVGVHIGHDCKIGNNLVFANYVSLAGHIKVGDYAIIGGLSAVHQY
TRIGEYSMIGGLSPVGADVIPFGLVSSKRAVLEGLNLIGMNRKGFDKADSLTALNAVE
EIFLGEGNFVDRIKQVAEKYKNNSIVTQIIDFLNQDSSRAFCHFKK"
misc_feature complement(348179..348958)
/locus_tag="MA5_01400"
/note="Acyl-[acyl carrier protein]; Region: LpxA; COG1043"
/db_xref="CDD:223973"
misc_feature complement(348182..348946)
/locus_tag="MA5_01400"
/note="UDP-N-acetylglucosamine O-acyltransferase
(UDP-GlcNAc acyltransferase): Proteins in this family
catalyze the transfer of (R)-3-hydroxymyristic acid from
its acyl carrier protein thioester to UDP-GlcNAc. It is
the first enzyme in the lipid A biosynthetic...; Region:
LbH_UDP-GlcNAc_AT; cd03351"
/db_xref="CDD:100042"
misc_feature complement(order(348350..348355,348371..348373,
348446..348448,348482..348487,348533..348535,
348590..348592,348599..348601,348668..348670,
348737..348739,348746..348748))
/locus_tag="MA5_01400"
/note="active site"
/db_xref="CDD:100042"
gene complement(348968..349405)
/gene="fabZ"
/locus_tag="MA5_01405"
/db_xref="GeneID:12007167"
CDS complement(348968..349405)
/gene="fabZ"
/locus_tag="MA5_01405"
/EC_number="4.2.1.-"
/note="COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl
carrier protein) dehydratases"
/codon_start=1
/transl_table=11
/product="(3R)-hydroxymyristoyl-ACP dehydratase"
/protein_id="YP_005404548.1"
/db_xref="GI:383486868"
/db_xref="GeneID:12007167"
/translation="MIIAITEIMDLIPHRYPFLLVDRVLKIDPNKSIIGIKNVTVNEP
QFTGHFPARPVMPGVLMVESMAQLAAILVAKSLDSTKNKEVFLMSIENTKFRRIVQPG
DTMHIHSVIDQQRANVWKFSSKVMVECEIAAESKFTAMIKDKM"
misc_feature complement(348980..349372)
/gene="fabZ"
/locus_tag="MA5_01405"
/note="FabZ is a 17kD beta-hydroxyacyl-acyl carrier
protein (ACP) dehydratase that primarily catalyzes the
dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP,
the third step in the elongation phase of the bacterial/
plastid, type II, fatty-acid...; Region: FabZ; cd01288"
/db_xref="CDD:238615"
gene complement(349596..350636)
/gene="lpxD"
/locus_tag="MA5_01410"
/db_xref="GeneID:12007168"
CDS complement(349596..350636)
/gene="lpxD"
/locus_tag="MA5_01410"
/EC_number="2.3.1.-"
/note="COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine
N-acyltransferase"
/codon_start=1
/transl_table=11
/product="UDP-3-O-[3-hydroxymyristoyl] glucosamine
N-acyltransferase"
/protein_id="YP_005404549.1"
/db_xref="GI:383486869"
/db_xref="GeneID:12007168"
/translation="MVSSNFYKNLGPRKLTAIVDFLHDIIEPTKIYEDIDIYDIKILQ
EASPNDISFLSNPKYSEFLKTTKAAACIVPKNFTEEVNQNTVLIHAENSYFAYSKLID
FFYAPIKSYSTKIMKSAIIADSATIGKNCYIGHNVVIEDDVIIGDNSIIDAGTFIGRG
VNIGKNARIEQHVSINYAIIGDDVVILVGAKIGQDGFGFSTEKGVHHKIFHIGIVKIG
NNVEIGSNTTIDRGALQDTIIEDLCRIDNLVQIGHGVKIGKGSIIVAQAGIAGSSAIG
KYCALGGQVGIAGHLNIGDGTQVAAQGGVAQNIEEGKIVGGSPAVPIMDWHRQSIIMK
QLVKTSNSKLKK"
misc_feature complement(349599..350600)
/gene="lpxD"
/locus_tag="MA5_01410"
/note="UDP-3-O-[3-hydroxymyristoyl]; Region: LpxD;
COG1044"
/db_xref="CDD:223974"
misc_feature complement(350325..350510)
/gene="lpxD"
/locus_tag="MA5_01410"
/note="UDP-3-O-[3-hydroxymyristoyl] glucosamine
N-acyltransferase, LpxD; Region: LpxD; pfam04613"
/db_xref="CDD:218175"
misc_feature complement(349656..350267)
/gene="lpxD"
/locus_tag="MA5_01410"
/note="UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD):
The enzyme catalyzes the transfer of 3-hydroxymyristic
acid or 3-hydroxy-arachidic acid, depending on the
organism, from the acyl carrier protein (ACP) to
UDP-3-O-acyl-glucosamine to produce UDP-2; Region:
LbH_LpxD; cd03352"
/db_xref="CDD:100043"
misc_feature complement(order(349662..349664,349674..349676,
349725..349733,349767..349769,349779..349787,
349803..349805,349833..349841,349851..349853,
349857..349859,349875..349877,349887..349889,
349893..349901,349905..349907,349932..349940,
349947..349949,349953..349955,349959..349961,
349971..349973,350007..350015,350046..350048,
350052..350054,350070..350072,350076..350078,
350109..350111,350115..350117,350121..350123,
350160..350162,350214..350219,350229..350231))
/gene="lpxD"
/locus_tag="MA5_01410"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:100043"
misc_feature complement(order(349734..349736,349767..349772,
349821..349829,349842..349847,349875..349880,
349887..349889,349899..349901,350040..350048))
/gene="lpxD"
/locus_tag="MA5_01410"
/note="active site"
/db_xref="CDD:100043"
misc_feature complement(order(349767..349772,349821..349826,
349875..349880,350040..350048))
/gene="lpxD"
/locus_tag="MA5_01410"
/note="UDP-GlcNAc binding site [chemical binding]; other
site"
/db_xref="CDD:100043"
misc_feature complement(order(349734..349736,349827..349829,
349842..349847,349887..349889,349899..349901))
/gene="lpxD"
/locus_tag="MA5_01410"
/note="lipid binding site [chemical binding];
lipid-binding site"
/db_xref="CDD:100043"
gene complement(351201..351276)
/locus_tag="MA5_t04329"
/db_xref="GeneID:12007169"
tRNA complement(351201..351276)
/locus_tag="MA5_t04329"
/product="tRNA-Phe"
/db_xref="GeneID:12007169"
gene 351640..352623
/locus_tag="MA5_01415"
/db_xref="GeneID:12007170"
CDS 351640..352623
/locus_tag="MA5_01415"
/note="COG0042 tRNA-dihydrouridine synthase"
/codon_start=1
/transl_table=11
/product="NIFR3-like protein (nifR3)"
/protein_id="YP_005404550.1"
/db_xref="GI:383486870"
/db_xref="GeneID:12007170"
/translation="MIKIGNIELSSNVILAPMSDVTDLEFRKLVKRFGAGLVVSEMIA
SRAMIMKSRQSMQKCAIMHDDPTSACVQLAGCEPDVIAEAAKMNEDMGAKIIDLNFGC
PAKKVVGGYAGSALMRDEQLAAKIFEATVKAVKIPVTVKMRIGWDDNTRNAPTLAKIA
ANSGVQMVTVHGRTRCQFYSGNANWDFIRTVKEAVKIPVIANGDITNFAKAKEALQRS
GADGIMVGRGVYGKPWLISQIAYYLKTGKEKPAPSIAEQLDIITKHYDAIIDYYGKSV
GVPIARKHIIWYSNGLPSSAEFRCTVNLMKDPIAVKEKIAEFYMSVMDANK"
misc_feature 351649..352608
/locus_tag="MA5_01415"
/note="putative TIM-barrel protein, nifR3 family; Region:
nifR3_yhdG; TIGR00737"
/db_xref="CDD:129820"
misc_feature 351673..352371
/locus_tag="MA5_01415"
/note="Dihydrouridine synthase-like (DUS-like) FMN-binding
domain. Members of this family catalyze the reduction of
the 5,6-double bond of a uridine residue on tRNA.
Dihydrouridine modification of tRNA is widely observed in
prokaryotes and eukaryotes, and also...; Region:
DUS_like_FMN; cd02801"
/db_xref="CDD:239200"
misc_feature order(351685..351693,351763..351765,351853..351855,
351934..351936,352060..352062,352150..352152,
352243..352245,352249..352251,352315..352320)
/locus_tag="MA5_01415"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:239200"
misc_feature order(351853..351855,351943..351948,352060..352062,
352066..352068,352147..352152,352156..352161,
352246..352251,352318..352320)
/locus_tag="MA5_01415"
/note="active site"
/db_xref="CDD:239200"
misc_feature order(351943..351945,352066..352068,352150..352152,
352156..352158)
/locus_tag="MA5_01415"
/note="catalytic residues [active]"
/db_xref="CDD:239200"
misc_feature order(351946..351948,352060..352062,352147..352149,
352159..352161,352246..352251)
/locus_tag="MA5_01415"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:239200"
gene 352653..353693
/locus_tag="MA5_01420"
/db_xref="GeneID:12007171"
CDS 352653..353693
/locus_tag="MA5_01420"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404551.1"
/db_xref="GI:383486871"
/db_xref="GeneID:12007171"
/translation="MFFNSSYAVEKAAIITDYKPIFLPVITENKKIKIAIRSYLKNKK
SYFVLVDPNSFKTEIVLQELVILPANKIEKENLLIKLNKTSYIKALNKYNFIDQNLQS
FKQDEFSNKFTDNTIVYEHKLNSKSSHSSTFMNSTVQQNYGATSSMYKVKGQFLTIDM
CPSSKNFEEVFFKKLVELSTKLKKAIPITICVSGLWINKHTEEFLWLLKQQENGYLQI
TWVNHSFSHPYFKDKPLEDNFLLSNKDDFENEVLEVGKILVSYNIAPSPFFRFPGLVS
DQTLIAKLKNFGFIPLGSNAWLAKGEKIQDGSFILVHGNSNEKAGIDLIMPMLSELKL
LPIEKAFLPTNL"
misc_feature 352938..353066
/locus_tag="MA5_01420"
/note="Rickettsial palindromic element RPE3 domain;
Region: RPE3; TIGR03775"
/db_xref="CDD:163487"
misc_feature 353106..353654
/locus_tag="MA5_01420"
/note="Putative catalytic NodB homology domain of
uncharacterized protein RC0012 from Rickettsia conorii and
its bacterial homologs; Region: CE4_RC0012_like; cd10963"
/db_xref="CDD:200585"
misc_feature order(353121..353132,353319..353324,353331..353336,
353460..353462,353466..353471,353520..353522,
353538..353543,353583..353585,353589..353591)
/locus_tag="MA5_01420"
/note="NodB motif; other site"
/db_xref="CDD:200585"
misc_feature order(353127..353132,353319..353321,353331..353333,
353466..353474,353520..353522,353583..353585,
353589..353591)
/locus_tag="MA5_01420"
/note="putative active site [active]"
/db_xref="CDD:200585"
gene complement(353758..354192)
/locus_tag="MA5_01425"
/db_xref="GeneID:12007172"
CDS complement(353758..354192)
/locus_tag="MA5_01425"
/note="COG0802 Predicted ATPase or kinase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404552.1"
/db_xref="GI:383486872"
/db_xref="GeneID:12007172"
/translation="MHTLNSKKETKNFAKLFAQNLKPNDIVLLNGDLGAGKTFFCREI
IKHFCGKNTNIISPTFNLLQIYKTPKFNIYHYDMYRIKSPEEIYELGFEEALNGNLIL
IEWSEIIKHLLTPPLIEVNLKVLDNNKRLCSIHKENFLFDFL"
misc_feature complement(353791..354192)
/locus_tag="MA5_01425"
/note="Predicted ATPase or kinase [General function
prediction only]; Region: COG0802"
/db_xref="CDD:223873"
gene complement(354180..355079)
/locus_tag="MA5_01430"
/db_xref="GeneID:12007173"
CDS complement(354180..355079)
/locus_tag="MA5_01430"
/note="COG0803 ABC-type metal ion transport system,
periplasmic component/surface adhesin"
/codon_start=1
/transl_table=11
/product="zinc/manganese ABC transporter substrate binding
protein"
/protein_id="YP_005404553.1"
/db_xref="GI:383486873"
/db_xref="GeneID:12007173"
/translation="MKTNMLTNNCKDKIFIKKSHTILRLLYFFKSLAMILFFIFFSLT
SYAKPKIVVSITPISSILAMLVKDKVDIESLAVNNECPHHHNIKPSDIIKVRNADMVI
YINEQFDGFTEKLISNNNQNIIKISDIKSLTTIKNNWHIWLDLNNAKILLQEFAQIFI
KNFPQLQKEINNNLPIALKELNKLQDIKNNEFRTIKDIILLSDSSEYFFLNTNIKTAK
LYRESQKSLRYISKLEELIKGSNNKCIVLSNKQKSQLYTKLNAKTKIIILNSENWNVK
NINSNTFQDQYLQMINQVKKCIH"
misc_feature complement(354354..354938)
/locus_tag="MA5_01430"
/note="Periplasmic binding protein TroA_c. These proteins
are predicted to function as initial receptors in the ABC
metal ion uptake in eubacteria and archaea. They belong
to the TroA superfamily of helical backbone metal receptor
proteins that share a...; Region: TroA_c; cd01145"
/db_xref="CDD:29748"
misc_feature complement(354270..354929)
/locus_tag="MA5_01430"
/note="Periplasmic solute binding protein family; Region:
SBP_bac_9; pfam01297"
/db_xref="CDD:201717"
misc_feature complement(354831..354833)
/locus_tag="MA5_01430"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:29748"
gene complement(355076..356239)
/locus_tag="MA5_01435"
/db_xref="GeneID:12007174"
CDS complement(355076..356239)
/locus_tag="MA5_01435"
/note="COG0617 tRNA nucleotidyltransferase/poly(A)
polymerase"
/codon_start=1
/transl_table=11
/product="poly(A) polymerase"
/protein_id="YP_005404554.1"
/db_xref="GI:383486874"
/db_xref="GeneID:12007174"
/translation="MQIIHKTLKISSKEYKKILSLLNKKGQSRLIGGCVRDALLDKDT
YDIDIATNLMPGEAINILSSANIKIIPTGLKFGTITAILNNEKFEITTLRKDIECNGR
HAKVIFSKDFAEDAARRDFTINALSYCPFKNEIYDYFDGFKDLQRAKVVFIGKAFNRI
KEDYLRILRFFRFSSYYANQLDYESFKACDTLKYGLKTLSRERIKSEIDKIIVSKRAT
QILEAMFKIGILELIFSIQNYEIKFFERANNFKLELATKYALLLYNQQNLNLKIFLNW
KFSKHEAMQILSILNFLNDAEFNIKKIWFEKKNYKEYLLAACIIDKLDYSQVKEFILK
YDTLSHPKFELNGNDLLNLNIEKKEIGAKLEYLKNFWIEHDFKPSKSELLEKL"
misc_feature complement(355079..356227)
/locus_tag="MA5_01435"
/note="tRNA nucleotidyltransferase/poly(A) polymerase
[Translation, ribosomal structure and biogenesis]; Region:
PcnB; COG0617"
/db_xref="CDD:223690"
misc_feature complement(355799..356206)
/locus_tag="MA5_01435"
/note="Nucleotidyltransferase (NT) domain of ClassII
CCA-adding enzymes; Region: NT_ClassII-CCAase; cd05398"
/db_xref="CDD:143388"
misc_feature complement(order(355868..355870,355877..355888,
355958..355960,355973..355975,356012..356014,
356096..356098,356102..356104,356129..356134,
356141..356146))
/locus_tag="MA5_01435"
/note="active site"
/db_xref="CDD:143388"
misc_feature complement(order(355868..355870,355880..355888,
356096..356098,356102..356104,356132..356134,
356141..356146))
/locus_tag="MA5_01435"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143388"
misc_feature complement(order(355973..355975,356096..356098,
356102..356104))
/locus_tag="MA5_01435"
/note="metal binding triad [ion binding]; metal-binding
site"
/db_xref="CDD:143388"
misc_feature complement(355538..355702)
/locus_tag="MA5_01435"
/note="Probable RNA and SrmB- binding site of polymerase
A; Region: PolyA_pol_RNAbd; pfam12627"
/db_xref="CDD:221674"
misc_feature 357005..359922
/note="potential frameshift: common BLAST hit:
gi|67458414|ref|YP_246038.1| cell surface antigen Sca1"
misc_feature 357259..360871
/note="potential frameshift: common BLAST hit:
gi|157964084|ref|YP_001498908.1| cell surface antigen
Sca1"
gene 361045..361119
/locus_tag="MA5_t04331"
/db_xref="GeneID:12007175"
tRNA 361045..361119
/locus_tag="MA5_t04331"
/product="tRNA-Glu"
/db_xref="GeneID:12007175"
gene 362784..362987
/locus_tag="MA5_01455"
/db_xref="GeneID:12007176"
CDS 362784..362987
/locus_tag="MA5_01455"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404555.1"
/db_xref="GI:383486875"
/db_xref="GeneID:12007176"
/translation="MILYILQLLLRTVYCKLSNLLQIAKIKARSSFITLLNLLGNRWY
NPIEQNKGALANVKNINFLKKNS"
gene complement(363119..363622)
/locus_tag="MA5_01460"
/db_xref="GeneID:12007177"
CDS complement(363119..363622)
/locus_tag="MA5_01460"
/EC_number="3.6.3.14"
/note="COG0542 ATPases with chaperone activity,
ATP-binding subunit"
/codon_start=1
/transl_table=11
/product="F0F1 ATP synthase subunit B"
/protein_id="YP_005404556.1"
/db_xref="GI:383486876"
/db_xref="GeneID:12007177"
/translation="MNFLDESFWLTISFVIFVYLIYRPAKKAILNALDTKISEIQEKV
LKAKKLKEDAALLFEQTKLQIQKLETLRSQMIEESDKATKQIIQDKTKEMEEFLERKK
ADAIQLIQNQKSTASKDLQDEFCDEVITLVSKYFRSAKLSEKSIAKNLMDKSDFVHND
SKATYLH"
misc_feature complement(363146..363622)
/locus_tag="MA5_01460"
/note="F0F1-type ATP synthase, subunit b [Energy
production and conversion]; Region: AtpF; COG0711"
/db_xref="CDD:223783"
misc_feature complement(363161..363622)
/locus_tag="MA5_01460"
/note="F0F1 ATP synthase subunit B; Validated; Region:
PRK06568"
/db_xref="CDD:168615"
gene complement(363622..364098)
/locus_tag="MA5_01465"
/db_xref="GeneID:12007178"
CDS complement(363622..364098)
/locus_tag="MA5_01465"
/EC_number="3.6.3.14"
/note="COG0711 F0F1-type ATP synthase, subunit b"
/codon_start=1
/transl_table=11
/product="F0F1 ATP synthase subunit B'"
/protein_id="YP_005404557.1"
/db_xref="GI:383486877"
/db_xref="GeneID:12007178"
/translation="MPQFDIDTYYSQIFWLIVTFGLLYILVYKFIAPNAEEIFNNRQK
NIQDNITQAAALTEEIEKLNKYYSDIVNKTNTEIDNLKKEKIESIESEFLIKKKNLVQ
DLTKSINQNIEDINLVAKQFRTNKSEAMIKLAVHIIEKIAGTKADMNLLQKNIKIK"
misc_feature complement(363640..364098)
/locus_tag="MA5_01465"
/note="F0F1 ATP synthase subunit B'; Validated; Region:
PRK06569"
/db_xref="CDD:180627"
misc_feature complement(363637..364062)
/locus_tag="MA5_01465"
/note="F0F1-type ATP synthase, subunit b [Energy
production and conversion]; Region: AtpF; COG0711"
/db_xref="CDD:223783"
gene complement(364111..364335)
/locus_tag="MA5_01470"
/db_xref="GeneID:12007179"
CDS complement(364111..364335)
/locus_tag="MA5_01470"
/EC_number="3.6.3.14"
/note="COG0636 F0F1-type ATP synthase, subunit
c/Archaeal/vacuolar-type H+-ATPase, subunit K"
/codon_start=1
/transl_table=11
/product="F0F1 ATP synthase subunit C"
/protein_id="YP_005404558.1"
/db_xref="GI:383486878"
/db_xref="GeneID:12007179"
/translation="MDIVSLKFIGIGFMAIGMYGAALGVSNIFSSLLSAIARNPSAAE
NLQRMALIGAGLAEAMGLFSFVIAMLLIFS"
misc_feature complement(364114..364335)
/locus_tag="MA5_01470"
/note="F0F1 ATP synthase subunit C; Validated; Region:
PRK07558"
/db_xref="CDD:181027"
gene complement(364369..365097)
/locus_tag="MA5_01475"
/db_xref="GeneID:12007180"
CDS complement(364369..365097)
/locus_tag="MA5_01475"
/EC_number="3.6.3.14"
/note="COG0356 F0F1-type ATP synthase, subunit a"
/codon_start=1
/transl_table=11
/product="F0F1 ATP synthase subunit A"
/protein_id="YP_005404559.1"
/db_xref="GI:383486879"
/db_xref="GeneID:12007180"
/translation="MTHSPLIQFNIKKLIDIKMFGFDVSFTNSSIYMLLATTLSLTYL
YLAFYNRKLIPSRLQVSAEIVYNLVADMLNQNIGIKGRKFIPLVFSLFIFILFCNLLG
MTPYSFTATSHIIVTFTLALLIFLTVTIVGFIKHGVSFLTLFLPHGTPVWLAPLMIVI
ELFTYLARPVSLSLRLAANMMAGHVLLKVIASFTVSLMIYLKFLPIPLMVILIGFEIF
IAILQAYIFTILSCMYLNDAINLH"
misc_feature complement(364372..365097)
/locus_tag="MA5_01475"
/note="F0F1-type ATP synthase, subunit a [Energy
production and conversion]; Region: AtpB; COG0356"
/db_xref="CDD:223433"
misc_feature complement(364381..364953)
/locus_tag="MA5_01475"
/note="ATP synthase subunit 6 (eukaryotes),also subunit A
(prokaryotes); Region: ATP_synt_6_or_A; TIGR01131"
/db_xref="CDD:233283"
gene complement(365102..365350)
/locus_tag="MA5_01480"
/db_xref="GeneID:12007181"
CDS complement(365102..365350)
/locus_tag="MA5_01480"
/note="COG5336 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404560.1"
/db_xref="GI:383486880"
/db_xref="GeneID:12007181"
/translation="MNTEKLKDIKARIKDFKSYKTSNSKIQQKINPFSIALDLVSGTI
VGLLIGILTDKFFNSKPLFLIIFTIIGMIAGFNIIRRK"
misc_feature complement(365105..365350)
/locus_tag="MA5_01480"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG5336"
/db_xref="CDD:34913"
gene complement(365402..366220)
/locus_tag="MA5_01485"
/db_xref="GeneID:12007182"
CDS complement(365402..366220)
/locus_tag="MA5_01485"
/note="COG1651 Protein-disulfide isomerase"
/codon_start=1
/transl_table=11
/product="protein-disulfide isomerase"
/protein_id="YP_005404561.1"
/db_xref="GI:383486881"
/db_xref="GeneID:12007182"
/translation="MRNIFIVLIFLFLSNCSEVKAQDKKYEGKQIIVQEPLQNNKTPQ
ETNQESINSATKSVVHNNDNNQTEEVLIHDSREQKKPEIRPTKVTFKIDDNDMVLGNK
KSNVIVVEYFSPTCPHCAYYHQTIFPELKKKYIDTNKIAYVIREFIATKQDLDAAILA
RCKGDINSFIQFHNIILQQQDKWAYSNKYRELLTDIGQLGGIPPEEYKQCLNSDKITA
TLIANTNLVAKAPKFIGTPSFFVNGVQTENYSIDNISKAVDKALDDETKKQINF"
misc_feature complement(365432..366079)
/locus_tag="MA5_01485"
/note="Protein-disulfide isomerase [Posttranslational
modification, protein turnover, chaperones]; Region: DsbG;
COG1651"
/db_xref="CDD:224565"
misc_feature complement(365441..365944)
/locus_tag="MA5_01485"
/note="Thioredoxin; Region: Thioredoxin_4; pfam13462"
/db_xref="CDD:222147"
gene 366383..366916
/locus_tag="MA5_01490"
/db_xref="GeneID:12007183"
CDS 366383..366916
/locus_tag="MA5_01490"
/note="COG1329 Transcriptional regulators, similar to M.
xanthus CarD"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404562.1"
/db_xref="GI:383486882"
/db_xref="GeneID:12007183"
/translation="MANITQSEHKTEQKSEFKIGQRIVYPAHGVGEITNIEYHTIADT
EIKVYVISFSQDKMTLKVPVNRAAVVGLRAVASRKDLDVIYSTLQGKPKQGNRMWSRR
AQEYEGKINSGNIVAIAEVLRDLHKNVDNDRSYSERTLYESALNRLAGELAILENIDP
TEAINKLVEVLREKLVA"
misc_feature 366419..366913
/locus_tag="MA5_01490"
/note="Transcriptional regulators, similar to M. xanthus
CarD [Transcription]; Region: COG1329"
/db_xref="CDD:224248"
gene complement(367170..368774)
/locus_tag="MA5_01495"
/db_xref="GeneID:12007184"
CDS complement(367170..368774)
/locus_tag="MA5_01495"
/note="COG0500 SAM-dependent methyltransferases"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404563.1"
/db_xref="GI:383486883"
/db_xref="GeneID:12007184"
/translation="MIKKTNKISYDEVPYPPFTFSYTYPPYLRTIGKLFGLNPPPLET
AKILDIGCGVGVNLLNFAETYPKSQSLGVDLSKTQIEIGKKTISDSKIKNVGLKALSI
LDLDESYGKFDYIVCHGVYSWVSKEVQDKILEVLNKLLNPNGIAFISYNTLPGWNMQN
TIREMMMFHSESFNTSHDKLQQSKLLLKFINDSLENSTTPYANFLREEAKLISTYADS
YVLHEYLGEINTGTYFHQFIEKAQKNHLNYLGDTSITAMFIGNLPTKAAEKLQAINDI
VRTEQYMDFITNRKFRSTLLCHQNIPINRKIEFENLKDFYTTFNIRPISSENKIDLNN
EQENISFYYENLPEPFISTTSAIMKAILYVYAENISNPIRLEQVAKEAFKKLGKYQLQ
DFLAILEQHFITFIFQGYLKIFETKPHAIATITEKPKTSQFVRYQAKHAHFNNVTNML
SVTNRLNDMIGIPIHEKYILEMLDGTHNIDDIKKGMIEKINSKLLIACDNKGQAVTDP
KLLKEFVDYIVNISLEKFRINYLLIG"
misc_feature complement(<368325..368648)
/locus_tag="MA5_01495"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:206018"
misc_feature complement(368325..368639)
/locus_tag="MA5_01495"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(368421..368423,368469..368477,
368550..368555,368607..368627))
/locus_tag="MA5_01495"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
misc_feature complement(367182..368024)
/locus_tag="MA5_01495"
/note="Predicted regulatory domain of a methyltransferase
[General function prediction only]; Region: COG4797"
/db_xref="CDD:34406"
gene complement(369025..370107)
/gene="recF"
/locus_tag="MA5_01500"
/db_xref="GeneID:12007185"
CDS complement(369025..370107)
/gene="recF"
/locus_tag="MA5_01500"
/note="COG1195 Recombinational DNA repair ATPase (RecF
pathway)"
/codon_start=1
/transl_table=11
/product="recombination protein F"
/protein_id="YP_005404564.1"
/db_xref="GI:383486884"
/db_xref="GeneID:12007185"
/translation="MKNIFLHSLTLENYRNFKNLELKTDNTPIILTGENGSGKTNILE
AISLFYPGRGLRSSKLTDICKTSEDYCKVKTLLQSKLGLAELSTHIKRSSNRRITEYN
ASKIANNELSKFTNMVWLTPQMEGIFTSSSTDRRKFLDRIVYNFDTKHAALLNKYEYY
MHERNKILAEDIRDNNWLKIIEEKMADISNNIANNRLKTIRFIQQAIDDIENEFPKAD
LSIDGIIEQKILNVEGDIVNFIITELYKTRSKDKLLGRTSFGIHKSDFLVKHQKKNIL
AKFCSTGEQKAILIAIILAEINSTIKLTKITPILLLDEIFVHLDDKRRQYLMGFFNAL
NIQLWVTATDLDGIENFANKAQLIKL"
misc_feature complement(369031..370098)
/gene="recF"
/locus_tag="MA5_01500"
/note="Recombinational DNA repair ATPase (RecF pathway)
[DNA replication, recombination, and repair]; Region:
RecF; COG1195"
/db_xref="CDD:224116"
misc_feature complement(<369547..370092)
/gene="recF"
/locus_tag="MA5_01500"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature complement(369988..370011)
/gene="recF"
/locus_tag="MA5_01500"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(order(369742..369744,369985..369993,
369997..370002))
/gene="recF"
/locus_tag="MA5_01500"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature complement(369742..369753)
/gene="recF"
/locus_tag="MA5_01500"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature complement(369034..>369330)
/gene="recF"
/locus_tag="MA5_01500"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature complement(369241..369270)
/gene="recF"
/locus_tag="MA5_01500"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature complement(369166..369183)
/gene="recF"
/locus_tag="MA5_01500"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature complement(369148..369159)
/gene="recF"
/locus_tag="MA5_01500"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(369070..369090)
/gene="recF"
/locus_tag="MA5_01500"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene complement(372068..372727)
/locus_tag="MA5_01505"
/db_xref="GeneID:12007186"
CDS complement(372068..372727)
/locus_tag="MA5_01505"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404565.1"
/db_xref="GI:383486885"
/db_xref="GeneID:12007186"
/translation="MTNNQFSEDTKKIADQIKDSLIGISDNLVLESKEVEEIFEELSK
NEEFDYEIERILAILNEQTMDLTQLQSRIILLIRKYLDKTKNLKLKMDEKLINKNVAE
VSNYLMHQHSKIVRDANKNLAKPKDKLQSLTKQARMDLKRLIKSFAVYQVYMFMNPKR
IAGETKLMNFAYNMIKGGMKLAKKYEGGKEKDIKSYSPRLIKKLEKAHAGFKKNNSIS
I"
gene 374687..375133
/locus_tag="MA5_01510"
/db_xref="GeneID:12007187"
CDS 374687..375133
/locus_tag="MA5_01510"
/note="COG1999 Uncharacterized protein SCO1/SenC/PrrC,
involved in biogenesis of respiratory and photosynthetic
systems"
/codon_start=1
/transl_table=11
/product="SCO2 protein precursor (sco2)"
/protein_id="YP_005404566.1"
/db_xref="GI:383486886"
/db_xref="GeneID:12007187"
/translation="MDDSLKIKFTLIEQQGKKFDSTNLQGHLSVIYFGTTYSLYDNQA
FKRVEDIIKILKRENILLQVVFITLDPEHDTSEVLKKYLEKIDSNFIGLTGRVQDIEQ
LAQQFKVFYTSKIFDVKTNEYALQHSNFVYLISSDGKILSHYYLGS"
misc_feature 374687..375130
/locus_tag="MA5_01510"
/note="Uncharacterized protein SCO1/SenC/PrrC, involved in
biogenesis of respiratory and photosynthetic systems
[General function prediction only]; Region: COG1999"
/db_xref="CDD:32182"
misc_feature 374711..375121
/locus_tag="MA5_01510"
/note="SCO (an acronym for Synthesis of Cytochrome c
Oxidase) family; composed of proteins similar to Sco1, a
membrane-anchored protein possessing a soluble domain with
a TRX fold. Members of this family are required for the
proper assembly of cytochrome c...; Region: SCO; cd02968"
/db_xref="CDD:48517"
misc_feature order(374798..374800,375065..375067)
/locus_tag="MA5_01510"
/note="Cu(I) binding site [ion binding]; other site"
/db_xref="CDD:48517"
gene complement(375149..375718)
/locus_tag="MA5_01515"
/db_xref="GeneID:12007188"
CDS complement(375149..375718)
/locus_tag="MA5_01515"
/note="COG1678 Putative transcriptional regulator"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404567.1"
/db_xref="GI:383486887"
/db_xref="GeneID:12007188"
/translation="MCDKIFHNLSGKTLVATPYVITKGIYHKSLIYMLSHTEEGAIGL
IFNRLVNHVDLKSFFKIKEDKITSQVMVPIYLGGPIEHEKGFFLHSRDYNKNLLLDFH
NDLAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCSKEFIF
AENPENKWHNALKHLGIDEIYFSSQIGNA"
misc_feature complement(375152..375718)
/locus_tag="MA5_01515"
/note="Putative transcriptional regulator [Transcription];
Region: COG1678"
/db_xref="CDD:224592"
gene 375779..376435
/locus_tag="MA5_01520"
/db_xref="GeneID:12007189"
CDS 375779..376435
/locus_tag="MA5_01520"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404568.1"
/db_xref="GI:383486888"
/db_xref="GeneID:12007189"
/translation="MITFFDITIFAIITLFSFFGLYQGIVGFLTRILGFIASVMLGYF
LYPYISAQIVKYIENEVISIIITSVISYVISLILCVFIVYKFLAIISFMRNGFIDRFL
GLLVGFVLGSTISLVLFLITMIFTSENYFQSKSLKDFVISSKQNKYGGVLKFSVTTDY
LDELSRKIIVIMPNNIFGSIEIFENKDFKNFLKKSNSLNDIEDVFSKELQDELSNIDD
"
misc_feature 375821..376375
/locus_tag="MA5_01520"
/note="Uncharacterized membrane protein, required for
colicin V production [General function prediction only];
Region: CvpA; COG1286"
/db_xref="CDD:31477"
misc_feature 375821..376177
/locus_tag="MA5_01520"
/note="Colicin V production protein; Region: Colicin_V;
pfam02674"
/db_xref="CDD:202343"
gene complement(376691..378013)
/locus_tag="MA5_01525"
/db_xref="GeneID:12007190"
CDS complement(376691..378013)
/locus_tag="MA5_01525"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404569.1"
/db_xref="GI:383486889"
/db_xref="GeneID:12007190"
/translation="MTSIYHILDRIPAIYKQDMEIEYEYLAMQLIKSGKLRIDTNDCC
NFARFTDPALNINLMISKEELTKPHLIPETTKLFQSLYKNSASDQKINSIFDNLKKQI
QKLQPVKKEVTEMLARLFVQSAHPIVIRWLLLNKTEVFLTYSHNIGDMMDIVSWQRVG
GNSGMQSTNGKDVAIFVSCGGNPFAENNKEHPSYGDGFAAVARLQIIAAQELGHFADI
KRDDKGRQLTRHAANFSGTKATDKVRIARKSDIIHCNNLFNKLLNAGMKKQLEYETKL
KFYNTNKINGVKVNAVKCMILIYKFRLLNYSSKNNLIFIRKFKTYKYMALMLEAMFKD
MQDNLSPNAEVYKNKNPEIEEAIACIEALARVPQQTIKWGYLTTKETMHHLYKIYYNE
VIPSLITSYNSFTGENYKRNLKKPKSSFFSKINIFSNKKLILKPVREL"
misc_feature complement(376775..378013)
/locus_tag="MA5_01525"
/note="Protein of unknown function (DUF2748); Region:
DUF2748; pfam10871"
/db_xref="CDD:151320"
gene complement(378558..379283)
/locus_tag="MA5_01530"
/db_xref="GeneID:12007191"
CDS complement(378558..379283)
/locus_tag="MA5_01530"
/EC_number="1.1.1.36"
/note="COG1028 Dehydrogenases with different specificities
(related to short-chain alcohol dehydrogenases)"
/codon_start=1
/transl_table=11
/product="acetoacetyl-CoA reductase"
/protein_id="YP_005404570.1"
/db_xref="GI:383486890"
/db_xref="GeneID:12007191"
/translation="MSEIAIVTGGTRGIGKATALELKNKDLTVIANFFSNYDAAKEME
SKYGIRTKCWNVADLEECKKAVNEIEEEFKKSVSILVNNAGITKDKMLHRMSNQDWTD
VINVNLHSCFNMSSSVMKQMRNQNYGRIVNISSINAQAGQIGQTNYSAAKAGIIGFTK
ALARETASKNITVNCIAPGYIATEMVNTVPKDILTKIVNSIPKKRLGQPEEIARAVAF
LVDKNAGFITGETISINGGHNMI"
misc_feature complement(378561..379283)
/locus_tag="MA5_01530"
/note="acetoacetyl-CoA reductase; Provisional; Region:
PRK12824"
/db_xref="CDD:183773"
misc_feature complement(378570..379277)
/locus_tag="MA5_01530"
/note="beta-Keto acyl carrier protein reductase (BKR),
involved in Type II FAS, classical (c) SDRs; Region:
BKR_SDR_c; cd05333"
/db_xref="CDD:187594"
misc_feature complement(order(378729..378737,378741..378743,
378747..378752,378828..378830,378840..378842,
378879..378887,378966..378968,379026..379037,
379116..379124,379182..379187,379242..379253,
379257..379259))
/locus_tag="MA5_01530"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187594"
misc_feature complement(order(378573..378611,378618..378620,
378630..378635,378639..378644,378651..378653,
378660..378671,378675..378683,378744..378746,
378780..378785,378789..378806,378810..378815,
378822..378827,378834..378839,378846..378869,
378915..378917,378924..378929,378936..378941,
378945..378950,378957..378962,378972..378974,
378981..378986,378993..379001,379005..379016,
379095..379097,379209..379211,379221..379223))
/locus_tag="MA5_01530"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:187594"
misc_feature complement(order(378789..378794,378798..378806,
378810..378815,378822..378827,378834..378839,
378846..378872,378915..378917,378924..378929,
378936..378938,378945..378950,378957..378962,
378972..378974,378981..378986,378993..378995,
378999..379001,379005..379013))
/locus_tag="MA5_01530"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187594"
misc_feature complement(order(378828..378830,378840..378842,
378879..378881,378963..378965))
/locus_tag="MA5_01530"
/note="active site"
/db_xref="CDD:187594"
gene 380316..382892
/locus_tag="MA5_01535"
/db_xref="GeneID:12007192"
CDS 380316..382892
/locus_tag="MA5_01535"
/note="COG0542 ATPases with chaperone activity,
ATP-binding subunit"
/codon_start=1
/transl_table=11
/product="protein disaggregation chaperone"
/protein_id="YP_005404571.1"
/db_xref="GI:383486891"
/db_xref="GeneID:12007192"
/translation="MNIDKFTAHAKSVIANHQSLAIKNDHQQILPLHLLSSLLSEETG
IIQALINNIGGNINLLKDQVQLELNKIPKIQVDGGGQIYYSAEDLKVLEKSSSIAKDS
GDSFVTIERIFEALTYDNTIAGKILTNNGINSKKLATAILHLRKGKKADTESAENNYD
ALKRYGRDVTELAENGKLDPIIGRDEEIRRAVQVLSRRMKNNPVLIGAPGVGKTAIIE
GLAQRIFSKDVPETLINCRIIELDIGALIAGAQYRGEFEKRLKAVLSEIKESSGEIIL
FIDELHLLVGTGKVDGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRF
QPVYVGEPSVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAI
DLIDEACSRMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKKITSLTEELK
KLESKSYDMNTKWQAEKSKLQQAQKLKEELEQARIDLERAERDANLAKASELKYGIIP
EIMNKLQEAENMDNKGLLKEIVSESDIASIISRITGIPIDTMLSSERERLLVIEQKLC
ESVIGQDEAIKGVSDAVRRSRSGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDD
RNALLRIDMSEYMEKHSISRLIGAPPGYIGYDQGGVLTESVRRRPYQVILFDEVEKAH
LDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQKEGEDTYKVRDEV
MQYVRAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLGSLKKILLQQNIILEFDESA
LNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEISSGNTVKIRREKEELSINI
ID"
misc_feature 380331..382874
/locus_tag="MA5_01535"
/note="ATP-dependent chaperone ClpB; Region:
chaperone_ClpB; TIGR03346"
/db_xref="CDD:234173"
misc_feature 380604..380753
/locus_tag="MA5_01535"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:217254"
misc_feature 380859..381320
/locus_tag="MA5_01535"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 380934..380957
/locus_tag="MA5_01535"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(380937..380960,381150..381152,381261..381263)
/locus_tag="MA5_01535"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 381138..381155
/locus_tag="MA5_01535"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 381312..381314
/locus_tag="MA5_01535"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 382023..382469
/locus_tag="MA5_01535"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 382125..382148
/locus_tag="MA5_01535"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(382128..382151,382341..382343,382467..382469)
/locus_tag="MA5_01535"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 382329..382346
/locus_tag="MA5_01535"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 382608..382850
/locus_tag="MA5_01535"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; pfam10431"
/db_xref="CDD:204486"
gene complement(383475..384638)
/locus_tag="MA5_01540"
/db_xref="GeneID:12007193"
CDS complement(383475..384638)
/locus_tag="MA5_01540"
/note="COG0533 Metal-dependent proteases with possible
chaperone activity"
/codon_start=1
/transl_table=11
/product="UGMP family protein"
/protein_id="YP_005404572.1"
/db_xref="GI:383486892"
/db_xref="GeneID:12007193"
/translation="MKKILGIESSCDDTAISIITERRKILSNIIISQNTEHAVFGGVV
PEIAARSHLSNLDQALKNVLKKSNTELTEISAIAATSGPGLIGGVIVGSMFARSLSSA
LKKPFIAINHLEGHALTARLTDNISYPYLLLLASGGHCQFVAVLGLGKYKILGTTIDD
AVGETFDKVAKMLNLSFPGGPEIEKRAKLGNPHKYKFPKPIINSGNCNMSFSGLKTAV
RTLIMNLKEVNDSVINDIAASFQFTIGAILSSKMQDAIRLYKQILNDYYEDINHPTKL
NLKSFRKDEFNWKPLECITRPKYRIHIQNSYRSNLLNDTIVIAGGVAANKYLQEILSD
CTRPYGYRLIAPPMHLCTDNAAMIAYAGLERYNNKLFSPLDFCPKAKWSLEDI"
misc_feature complement(383478..384632)
/locus_tag="MA5_01540"
/note="UGMP family protein; Validated; Region: PRK09604"
/db_xref="CDD:236585"
misc_feature complement(384051..384503)
/locus_tag="MA5_01540"
/note="Inactive homolog of metal-dependent proteases,
putative molecular chaperone [Posttranslational
modification, protein turnover, chaperones]; Region:
COG1214; cl17884"
/db_xref="CDD:248438"
misc_feature complement(383691..383819)
/locus_tag="MA5_01540"
/note="Rickettsial palindromic element RPE3 domain;
Region: RPE3; TIGR03775"
/db_xref="CDD:163487"
gene complement(384762..385949)
/locus_tag="MA5_01545"
/db_xref="GeneID:12007194"
CDS complement(384762..385949)
/locus_tag="MA5_01545"
/note="COG1398 Fatty-acid desaturase"
/codon_start=1
/transl_table=11
/product="acyl-CoA desaturase"
/protein_id="YP_005404573.1"
/db_xref="GI:383486893"
/db_xref="GeneID:12007194"
/translation="MLSKLNKPALFALIFYPVFIISLVVKYSFDYGIGLTEIIFIIAS
YYINNITVGIGLHRLWSHNAYKINKYAEFVLVMLSAGTLQGPALSWASNHYKHHAKTD
TDQDPHSPLKFDNKVLGFLWSHIGWMLIGSGSYKFIDRITWAKLGKNNLLKWQLKYYW
KIAAFMNIVVPLFTGYLVGGTIKSAYAGFLFIGLGRFLQQQATFCVNSLCHFVGSKKY
YRGTAGDIWWMALFLLGENWHNYHHAFPSDYRNGVKWYHFDVHKWIIFLMSKIGLASE
LERTTKVRIQAKMQETLSYLSKKQKQKLSLMQTKIDNLLENLCLKSKEIEESSLTIKE
QLKKSFVEIQESLKNLAEQVSSATQITEKPSEKLLKIVNKKIIDAEQSIYKLYNQLNT
LKV"
misc_feature complement(<385518..385850)
/locus_tag="MA5_01545"
/note="The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like
CD includes the delta-9 and delta-11 acyl CoA desaturases
found in various eukaryotes including vertebrates,
insects, higher plants, and fungi. The delta-9 acyl-lipid
desaturases are found in a wide...; Region:
Delta9-FADS-like; cd03505"
/db_xref="CDD:58171"
misc_feature complement(385158..385802)
/locus_tag="MA5_01545"
/note="Fatty acid desaturase; Region: FA_desaturase;
pfam00487"
/db_xref="CDD:201259"
misc_feature complement(order(385656..385661,385668..385670,
385764..385766,385779..385781))
/locus_tag="MA5_01545"
/note="Di-iron ligands [ion binding]; other site"
/db_xref="CDD:58171"
misc_feature complement(385119..>385400)
/locus_tag="MA5_01545"
/note="The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like
CD includes the delta-9 and delta-11 acyl CoA desaturases
found in various eukaryotes including vertebrates,
insects, higher plants, and fungi. The delta-9 acyl-lipid
desaturases are found in a wide...; Region:
Delta9-FADS-like; cd03505"
/db_xref="CDD:58171"
gene 386741..387106
/gene="rpsF"
/locus_tag="MA5_01550"
/db_xref="GeneID:12007195"
CDS 386741..387106
/gene="rpsF"
/locus_tag="MA5_01550"
/note="COG0360 Ribosomal protein S6"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S6"
/protein_id="YP_005404574.1"
/db_xref="GI:383486894"
/db_xref="GeneID:12007195"
/translation="MSFYESVFIIRQDVSLNDIDKIVDDFTKIIKDNNGTIIKKEYWR
LRTLAYKIGNNKKGHYYFLGIDITSNVKEELERKMKLNENIIRFLTIKADSISSEPSP
ILKNQSTENTPVIDVTINN"
misc_feature 386741..387064
/gene="rpsF"
/locus_tag="MA5_01550"
/note="30S ribosomal protein S6; Reviewed; Region: rpsF;
PRK00453"
/db_xref="CDD:179034"
gene 387131..387418
/gene="rpsR"
/locus_tag="MA5_01555"
/db_xref="GeneID:12007196"
CDS 387131..387418
/gene="rpsR"
/locus_tag="MA5_01555"
/note="COG0238 Ribosomal protein S18"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S18"
/protein_id="YP_005404575.1"
/db_xref="GI:383486895"
/db_xref="GeneID:12007196"
/translation="MLKSNNASETATSKGVDKAAKKVFFRRRKGCPLSVPNAPVIDYK
NPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILALLPFVFQAK"
misc_feature <387221..387403
/gene="rpsR"
/locus_tag="MA5_01555"
/note="30S ribosomal protein S18; Reviewed; Region: rpsR;
PRK00391"
/db_xref="CDD:178997"
gene 387430..387945
/gene="rplI"
/locus_tag="MA5_01560"
/db_xref="GeneID:12007197"
CDS 387430..387945
/gene="rplI"
/locus_tag="MA5_01560"
/note="COG0359 Ribosomal protein L9"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L9"
/protein_id="YP_005404576.1"
/db_xref="GI:383486896"
/db_xref="GeneID:12007197"
/translation="MEVILIKPVRKLGKIGDILKVADGFGRNYLLPQKLAIRATKSNK
ELIVKQKYEFEEKDKQVREEVEKINTIIKDQQLVFIRQTSDDCKLFGSVTNKDIADKL
SKNISYNISHSNIILDKQIKSTGIYTVEIRLHAELTSIVTVVVARSESEAQDYLREQK
AETLEDVDETA"
misc_feature 387430..387873
/gene="rplI"
/locus_tag="MA5_01560"
/note="50S ribosomal protein L9; Reviewed; Region: rplI;
PRK00137"
/db_xref="CDD:234659"
misc_feature 387430..387570
/gene="rplI"
/locus_tag="MA5_01560"
/note="Ribosomal protein L9, N-terminal domain; Region:
Ribosomal_L9_N; pfam01281"
/db_xref="CDD:201708"
misc_feature 387613..387873
/gene="rplI"
/locus_tag="MA5_01560"
/note="Ribosomal protein L9, C-terminal domain; Region:
Ribosomal_L9_C; pfam03948"
/db_xref="CDD:146531"
gene 388104..389396
/locus_tag="MA5_01565"
/db_xref="GeneID:12007198"
CDS 388104..389396
/locus_tag="MA5_01565"
/note="COG0037 Predicted ATPase of the PP-loop superfamily
implicated in cell cycle control"
/codon_start=1
/transl_table=11
/product="cell cycle protein MESJ (mesJ)"
/protein_id="YP_005404577.1"
/db_xref="GI:383486897"
/db_xref="GeneID:12007198"
/translation="MLYEKFEYNINNLIGNFGLSKIAIAVSGGSDSISLLYLANIWAR
KNNIELFVISVDHNLRPQSKQENYYIHTISSNLNRKYYNLSFDHQNNFSNLQERAREG
RYDLMTNLCLELDVLVLLTAHHEDDYVENFCLRLERNSGIFGLSSSNIHWYNNIQIIR
PLYNIPKSELVEYLVNHKIKWFEDESNLSDKYRRNIIRQKLFKEENYIKAEISLQQLK
TNKLIEDELKPALISAIAEAVKIFEYGFTFLDLVKFDKFLNEVKAQIINFLLIMISGQ
SRSARFYSIAHILKLISQDINFKNTVHGCVIKRIQNELLIYREFGKKLPKSKILLDKS
VIWDNRFCITKNQKTPDCVITYLSLADYKAIKKQLDLKHLKNLSCKNHNAILFTLPII
KILEKVIAIPHISYYDNDVWNFEVSFAPNFVSRFTHFC"
misc_feature 388104..388982
/locus_tag="MA5_01565"
/note="tRNA(Ile)-lysidine synthase MesJ [Cell cycle
control, cell division, chromosome partitioning]; Region:
MesJ; COG0037"
/db_xref="CDD:223115"
misc_feature 388164..388712
/locus_tag="MA5_01565"
/note="N-terminal domain of predicted ATPase of the
PP-loop faimly implicated in cell cycle control [Cell
division and chromosome partitioning]. This is a subfamily
of Adenine nucleotide alpha hydrolases
superfamily.Adeninosine nucleotide alpha hydrolases...;
Region: PP-ATPase; cd01992"
/db_xref="CDD:238950"
misc_feature order(388176..388184,388188..388199,388263..388265,
388269..388271)
/locus_tag="MA5_01565"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:238950"
gene 389447..391360
/locus_tag="MA5_01570"
/db_xref="GeneID:12007199"
CDS 389447..391360
/locus_tag="MA5_01570"
/note="COG0465 ATP-dependent Zn proteases"
/codon_start=1
/transl_table=11
/product="cell division protein FTSH (ftsH)"
/protein_id="YP_005404578.1"
/db_xref="GI:383486898"
/db_xref="GeneID:12007199"
/translation="MNNQGRSILAWAALFIFVILLFNVFQSDGLLGVRNNITFSDFLT
RVDEKTINSVKIQGRVIEGTANDGSTFSTYSPDYPDLVNRLTSNDVNIEVVPLETRMN
TFLGFLISWFPMLLLIGVWVFFMRQMHGGGKAMGFGKSKARLLSDKGPKITFKDVAGI
DEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFS
ISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQ
TLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQIL
KVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAK
DKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQ
RLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVT
KAGLSDLIGPIFHGSNSDDMYGRQSSNEISEATAELIDAEVKRIITQGYEFAKDILTK
HIDQLHTLANALIEYETLSGQQIKNLLSGRALDSEEENKFPFNDSHTIKIDKENLHEK
VKSTKDKKENIIS"
misc_feature <389549..389734
/locus_tag="MA5_01570"
/note="FtsH Extracellular; Region: FtsH_ext; pfam06480"
/db_xref="CDD:219052"
misc_feature 389753..391228
/locus_tag="MA5_01570"
/note="ATP-dependent metalloprotease FtsH; Region:
FtsH_fam; TIGR01241"
/db_xref="CDD:233327"
misc_feature 389918..390406
/locus_tag="MA5_01570"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 390029..390052
/locus_tag="MA5_01570"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(390032..390055,390206..390208,390347..390349)
/locus_tag="MA5_01570"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 390194..390211
/locus_tag="MA5_01570"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 390389..390391
/locus_tag="MA5_01570"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 390596..391222
/locus_tag="MA5_01570"
/note="Peptidase family M41; Region: Peptidase_M41;
pfam01434"
/db_xref="CDD:216502"
gene 391605..392390
/gene="sdhB"
/locus_tag="MA5_01575"
/db_xref="GeneID:12007200"
CDS 391605..392390
/gene="sdhB"
/locus_tag="MA5_01575"
/EC_number="1.3.99.1"
/note="COG0479 Succinate dehydrogenase/fumarate reductase,
Fe-S protein subunit"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase iron-sulfur subunit"
/protein_id="YP_005404579.1"
/db_xref="GI:383486899"
/db_xref="GeneID:12007200"
/translation="MVELRLPSNSVVKKGREHKAQQKMLKPRKVKVYRYDPDLDENPT
IDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIK
PIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKNDSPAPSNSERLQSIK
DREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGARLEA
LEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGRVKNLIAERHGV"
misc_feature 391689..392378
/gene="sdhB"
/locus_tag="MA5_01575"
/note="succinate dehydrogenase iron-sulfur subunit;
Reviewed; Region: sdhB; PRK05950"
/db_xref="CDD:235652"
misc_feature 391689..392003
/gene="sdhB"
/locus_tag="MA5_01575"
/note="2Fe-2S iron-sulfur cluster binding domain; Region:
Fer2_3; pfam13085"
/db_xref="CDD:221911"
gene complement(392850..393926)
/locus_tag="MA5_01580"
/db_xref="GeneID:12007201"
CDS complement(392850..393926)
/locus_tag="MA5_01580"
/note="COG1565 Uncharacterized conserved protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404580.1"
/db_xref="GI:383486900"
/db_xref="GeneID:12007201"
/translation="MSVESKIRQLIYQHGYITCDVLMQEVLSSNPNSYYKQVKSLASE
GDFVTAPEISQLFGEIIGLWCIREWQRIGNPKSLSLVELGPGRGLLMRDLLRTAKLVP
EFYKALSIKLIEINKNFIAHQKSNLQDINLPIKHLAFIEEIPQKPTIIITNEFFDTMP
IKQYIKVKELWYERIFLVQPVDGRIKYDKISINKRLQEYLLRTHIEAKDGAILEESYK
SIEIIKFIAEHLKKVRGSCLIIDYGYDIAPYDRTRYQYNPTLQAVRKHKYCPILENLG
EADLSAHVDFYSLKTVAKNSKINVIDTISQRDFLIQNGILLRKQTLKDKLNDKQVLII
EKQVERLILPEQMGKLFKVLQIMN"
misc_feature complement(392853..393926)
/locus_tag="MA5_01580"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1565"
/db_xref="CDD:31753"
misc_feature complement(393042..393746)
/locus_tag="MA5_01580"
/note="Putative S-adenosyl-L-methionine-dependent
methyltransferase; Region: Methyltransf_28; pfam02636"
/db_xref="CDD:202326"
gene complement(393905..394684)
/locus_tag="MA5_01585"
/db_xref="GeneID:12007202"
CDS complement(393905..394684)
/locus_tag="MA5_01585"
/EC_number="2.4.99.-"
/note="COG0682 Prolipoprotein diacylglyceryltransferase"
/codon_start=1
/transl_table=11
/product="prolipoprotein diacylglyceryl transferase"
/protein_id="YP_005404581.1"
/db_xref="GI:383486901"
/db_xref="GeneID:12007202"
/translation="MILPNINPIIFSIGPFSISWYSLAYVVGILLGWFYATKIIEKFK
PEITKKHIDDFITYAIIAIIVGGRLGYVLLYNPLKYFTNPIEILKTYEGGMSFHGATI
GIIMAAYLFCQKYKINFLSLTDIITTVAPIGLFLGRIANFINCELYGRITNSSFGIIF
PNSDLQPRHPSQLYEAFFEGLILFCILTYAVFRHDTLKKRGLNSGIYLIFYSLFRIII
EMFREPDIQIGFILDSLTMGQILSAPMLLLGSYLICRSNPK"
misc_feature complement(393908..394627)
/locus_tag="MA5_01585"
/note="prolipoprotein diacylglyceryl transferase;
Reviewed; Region: PRK00052"
/db_xref="CDD:178826"
gene 394910..396076
/locus_tag="MA5_01590"
/db_xref="GeneID:12007203"
CDS 394910..396076
/locus_tag="MA5_01590"
/note="COG0668 Small-conductance mechanosensitive channel"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404582.1"
/db_xref="GI:383486902"
/db_xref="GeneID:12007203"
/translation="MQYLTDLYHTSSTELVLLFVMLASLMPVIFLIKRLIFIPIQNYL
TRHHYDDCERILKKYPIFRYLLHTLLALYFLCWSNIFHPISFKTHVLLGIKDTVVILY
TSISVTMLLLTLIDAFSDLYHNKIKNITKNAPLSLYFQILKIIVIVIAVIVTISYILN
ISLSKFLTSLGAAAALLTFVFKDTVLGLLASLQLTTQKIINIGDLVRMGEIEGIVEKI
TISVVTIRNFDQSISTVPTYSILNSNVTNYRGITESGARRIKRVFNINMATINFCDIN
LLKELKKSPYISKDLIDKITLDKEEQDLTNIKLFKLYIKEYLKNNPKVYTEGFTFLVR
QLEPTITGLPIEIYIFVKEVNLVGYENIQDNISEHLISILPEFKLKIFQNVGVV"
misc_feature 395159..396061
/locus_tag="MA5_01590"
/note="Small-conductance mechanosensitive channel [Cell
envelope biogenesis, outer membrane]; Region: MscS;
COG0668"
/db_xref="CDD:31012"
misc_feature 395384..396028
/locus_tag="MA5_01590"
/note="Mechanosensitive ion channel; Region: MS_channel;
pfam00924"
/db_xref="CDD:201506"
gene 396225..397907
/locus_tag="MA5_01595"
/db_xref="GeneID:12007204"
CDS 396225..397907
/locus_tag="MA5_01595"
/note="COG0706 Preprotein translocase subunit YidC"
/codon_start=1
/transl_table=11
/product="membrane protein insertase"
/protein_id="YP_005404583.1"
/db_xref="GI:383486903"
/db_xref="GeneID:12007204"
/translation="MNNNIINLIAAVVLSLSIIFGWQYFFVKPEQKKQQQRIAMHKSE
NLNKQKLKALAEPASDIAVQEASQVQRIKIESESLTGSIALKGLRFDDLILKKYKQDL
SQNSPAVRLFSPANTENAYFAEIGLVSNLNSVKLPNSNTVWNSDSEVLSPEKPVNLFW
INEDGIKFLVTITVDKNYLFTIEQTIINNSDKELPVQSYGLINRKYISLEKAVNILHQ
GPIGCIDENLKEYSYDDIKDKKSTKFALSKVDWIGITDKYWLSSLIPDKSSRYSSNFN
YALKQGTERYQVDFISPVQVIKPGENLSIKSRIFAGAKKVDLLDEYEKSYDIKLFDRA
IDFGWFYIITKPVFYAMNFFYGYVGNFGISILIVTVIIKLLMFTLANKSYRSMKKMKN
LQPEIDRIKNLYNNDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLYVT
IEMRQAPFFGWIKDLSSPDPTTIFNLFGLLPFAPPSFLMIGAWPILMAITMFLHQKMS
PELADPIQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN"
misc_feature 396267..397904
/locus_tag="MA5_01595"
/note="membrane protein insertase; Provisional; Region:
PRK01318"
/db_xref="CDD:234942"
misc_feature 397302..397898
/locus_tag="MA5_01595"
/note="membrane protein insertase, YidC/Oxa1 family,
C-terminal domain; Region: yidC_oxa1_cterm; TIGR03592"
/db_xref="CDD:234272"
gene 397907..398452
/locus_tag="MA5_01600"
/db_xref="GeneID:12007205"
CDS 397907..398452
/locus_tag="MA5_01600"
/note="COG0558 Phosphatidylglycerophosphate synthase"
/codon_start=1
/transl_table=11
/product="CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase"
/protein_id="YP_005404584.1"
/db_xref="GI:383486904"
/db_xref="GeneID:12007205"
/translation="MRIDKNLPNYLTIARIMVIPVIILLFYINNSLARKLGALLFVLA
SITDFFDGYIARKYNLVTSFGKMFDPIADKLLVGCVTIMLLKKDNVDEIPCLLILARE
FLVSGLREFLALVKVSVPVSRLAKLKTFLQMFALSILILGSKGSGIIYLDIVGEIILW
IAAFLTIITGYSYFKACKTYF"
misc_feature 397919..398428
/locus_tag="MA5_01600"
/note="CDP-alcohol phosphatidyltransferase; Region:
CDP-OH_P_transf; cl00453"
/db_xref="CDD:241872"
gene complement(399114..399497)
/locus_tag="MA5_01615"
/db_xref="GeneID:12007206"
CDS complement(399114..399497)
/locus_tag="MA5_01615"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404585.1"
/db_xref="GI:383486905"
/db_xref="GeneID:12007206"
/translation="MLKKIIFGITISLTTGCFANSTASNLSKKDVAKTNDVNTQKIID
DFSVYAGTIKPEVREEIQKYRVEIVDINKKKRELYNRLSKEAQSFLAEQQKYKQKLSI
PKLLIENDPKNNTANSKDNNDKDMK"
gene complement(400587..400862)
/locus_tag="MA5_01620"
/db_xref="GeneID:12007207"
CDS complement(400587..400862)
/locus_tag="MA5_01620"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404586.1"
/db_xref="GI:383486906"
/db_xref="GeneID:12007207"
/translation="MIIKCSNDELDIVQKIQANIFCKENTKKLLDMRSSNLVPLTRID
FESFDSHLINLSNGIYALGMTHMLCFTKTVSKVNSIINSLVTLEEAA"
misc_feature 401239..402736
/note="potential frameshift: common BLAST hit:
gi|15603932|ref|NP_220447.1| ADP,ATP carrier protein"
gene 402808..404097
/locus_tag="MA5_01635"
/db_xref="GeneID:12007208"
CDS 402808..404097
/locus_tag="MA5_01635"
/note="COG2271 Sugar phosphate permease"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate transporter (glpT)"
/protein_id="YP_005404587.1"
/db_xref="GI:383486907"
/db_xref="GeneID:12007208"
/translation="MTNIESKIKMPRSPYVKKYNSWRIRILYSIVIGYATFYFCRQNF
NIATPAIREYFGVTKTQIGWILTAASIMYGVSKACNGFISDKVNARIFMVLGLLFVGI
ITILIGFSDFLWLIGILWIASNWFQSMGWPPATKMLTHWFAAKELGTKWAIGATSNQI
GGALAMISCGYLIDKFDWRAAFFVPGLVACVASLFLYNRLRNSPKEVGLSTVEEYKEY
PPEAIGNYERLLTKQLLKMVFCNKLIWYVCLANMFVYIIRSGVIYWAPTFLKDLRNIS
FVNAGLQIGLYEMIGIPGALIAGILSDKLFQGRRGPIASICMILLTLLLVLFWKVPIQ
SELLSILILALIGFFVAGPQLLVGIAAADFSTRQAVGTANGLSGLFGYLGAAIAGVGV
GWISDNYGWNGVFIFFSISALLGGVLFALTWNHSAEK"
misc_feature 402808..404094
/locus_tag="MA5_01635"
/note="Sugar phosphate permease [Carbohydrate transport
and metabolism]; Region: UhpC; COG2271"
/db_xref="CDD:225180"
misc_feature 402886..404076
/locus_tag="MA5_01635"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(402928..402930,402937..402945,402949..402954,
403003..403005,403012..403017,403024..403026,
403036..403041,403045..403050,403186..403191,
403198..403203,403210..403215,403222..403224,
403258..403263,403270..403275,403291..403293,
403570..403572,403579..403584,403591..403596,
403603..403605,403645..403647,403657..403659,
403669..403671,403678..403680,403690..403692,
403846..403848,403855..403860,403867..403869,
403879..403884,403891..403893,403924..403929,
403936..403941,403948..403953,403960..403962)
/locus_tag="MA5_01635"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 404260..404682
/gene="ndk"
/locus_tag="MA5_01640"
/db_xref="GeneID:12007209"
CDS 404260..404682
/gene="ndk"
/locus_tag="MA5_01640"
/EC_number="2.7.4.6"
/note="COG0105 Nucleoside diphosphate kinase"
/codon_start=1
/transl_table=11
/product="mulitfunctional nucleoside diphosphate
kinase/apyrimidinic endonuclease/3'-phosphodiesterase"
/protein_id="YP_005404588.1"
/db_xref="GI:383486908"
/db_xref="GeneID:12007209"
/translation="MTIQYTFSMIKPDVIKRNKIGQVNTYLENAGLKIVAQKMKFLTK
YEAECFYDEHRARPFFNSLVEYITSGAVVLQVLKGEDAITLNRTIMGATNPAEAKEGT
IRKDLGESIEANSIHGSDSENSAKREIKFFFSKSEIIE"
misc_feature 404269..404658
/gene="ndk"
/locus_tag="MA5_01640"
/note="Nucleoside diphosphate kinase Group I
(NDPk_I)-like: NDP kinase domains are present in a large
family of structurally and functionally conserved proteins
from bacteria to humans that generally catalyze the
transfer of gamma-phosphates of a nucleoside...; Region:
NDPk_I; cd04413"
/db_xref="CDD:239876"
misc_feature order(404290..404292,404410..404412,404434..404436,
404518..404520,404536..404538,404569..404571,
404599..404601,404608..404610,404614..404619,
404641..404643)
/gene="ndk"
/locus_tag="MA5_01640"
/note="active site"
/db_xref="CDD:239876"
misc_feature order(404302..404304,404317..404325,404332..404334,
404341..404343,404368..404376)
/gene="ndk"
/locus_tag="MA5_01640"
/note="multimer interface [polypeptide binding]; other
site"
/db_xref="CDD:239876"
gene 404686..406551
/locus_tag="MA5_01645"
/db_xref="GeneID:12007210"
CDS 404686..406551
/locus_tag="MA5_01645"
/note="COG0445 NAD/FAD-utilizing enzyme apparently
involved in cell division"
/codon_start=1
/transl_table=11
/product="tRNA uridine 5-carboxymethylaminomethyl
modification protein GidA"
/protein_id="YP_005404589.1"
/db_xref="GI:383486909"
/db_xref="GeneID:12007210"
/translation="MLKYGVIIIGGGHAGVEAAAASARLGVHTLLITLKPENLGEMSC
NPAIGGIAKGTLVKEIDALDGLMGFVIDKSGIHYKMLNETRGPAVWGPRAQADRKLYK
KVMYQILTNYRNLDILYAKVEDIQIKSSKVEAVILSNGSKIFCQKVVLTTGTFLSGFI
HIGSIKMPAGRIYEEPSYGLSNTLKRLGFKIARLKTGTPPRIDGRTIDYSKTALQQGD
QIPRPFSELTDVIDVPQINCFITKTTSETHDIIRENLDKSAMYSGQIEGIGPRYCPSI
EDKIVKFSTKLEHRIFLEPEGLEDYTIYPNGISTSLPEEVQYKLIKTIPGLENAQVLR
PGYAIEYDYVDPREINVTLETKKITGLYFAGQINGTTGYEEAAGQGIIAGINAALSVK
DQAPFILTRATSYIGVMIDDLTTFGTVEPYRMFTSRSEYRLSLRADNADLRLTELGIK
IGVITEKRKKFFTKKCKNIEKTKLLLNNLSLTTSKLAKMGIQVAQDGKYKTILDLFKI
PSFNVEQAIKIFPILKKQNNNILQLLYIEAKYASYLTRQYADINLFQSEEIQLIPKNI
DYFKIPSISLEIQEKLSYHKPATIGVARRISGITPASITAIIIYLKTKYSDESSK"
misc_feature 404770..406545
/locus_tag="MA5_01645"
/note="tRNA uridine 5-carboxymethylaminomethyl
modification enzyme GidA; Validated; Region: PRK05192"
/db_xref="CDD:235362"
misc_feature <405604..405930
/locus_tag="MA5_01645"
/note="NAD(FAD)-utilizing enzyme possibly involved in
translation [Translation, ribosomal structure and
biogenesis]; Region: Gid; COG1206"
/db_xref="CDD:224127"
misc_feature 406300..406512
/locus_tag="MA5_01645"
/note="GidA associated domain 3; Region: GIDA_assoc_3;
pfam13932"
/db_xref="CDD:206103"
gene 406535..407110
/gene="gidB"
/locus_tag="MA5_01650"
/db_xref="GeneID:12007211"
CDS 406535..407110
/gene="gidB"
/locus_tag="MA5_01650"
/note="COG0357 Predicted S-adenosylmethionine-dependent
methyltransferase involved in bacterial cell division"
/codon_start=1
/transl_table=11
/product="16S rRNA methyltransferase GidB"
/protein_id="YP_005404590.1"
/db_xref="GI:383486910"
/db_xref="GeneID:12007211"
/translation="MKVQSEIIEKLEIFQNLIKKWNKSINLISDNTIPNFWQRHILDS
LQLMQYISNKEIHLIDIGSGAGFPGIVLSIAGVTKVSLIEADLRKCIFLAKASKISNN
SIQIINQRIEKIEIDCSILTCRAFSNLNTIFNYTQNISVREKFLLLKGKSYLTEIVEA
KERWSFDYLIHQSITCGSGKILEINNLTKII"
misc_feature 406553..407089
/gene="gidB"
/locus_tag="MA5_01650"
/note="rRNA small subunit methyltransferase G; Region:
GidB; pfam02527"
/db_xref="CDD:217086"
misc_feature 406565..407086
/gene="gidB"
/locus_tag="MA5_01650"
/note="16S rRNA (guanine(527)-N(7))-methyltransferase
GidB; Region: gidB; TIGR00138"
/db_xref="CDD:211555"
gene 407107..407874
/locus_tag="MA5_01655"
/db_xref="GeneID:12007212"
CDS 407107..407874
/locus_tag="MA5_01655"
/note="COG1192 ATPases involved in ChromosomeMA5
partitioning"
/codon_start=1
/transl_table=11
/product="Soj family protein"
/protein_id="YP_005404591.1"
/db_xref="GI:383486911"
/db_xref="GeneID:12007212"
/translation="MKIISIVNQKGGVAKTTTTVNLATAFASVNKKILVIDLDPQGNS
STGFGIIQQQRKNTIYQVLTNLIELKDAIIATNIPNLEIITSNTNLSAAELDLTTLKE
REYVLMKLLEEVKILYDYIIIDCPPSLNLLTVNALVASDEVLIPMQCDFYSLEGLSHL
LKTIEIVEKKLNPKIKIAGILFTMYDKRNRLTEQVEDDVRKCLGELVFKTVIPRNIKL
SEAPSYGKPAILYDYKCAGAVAYIELTKEILERYGEK"
misc_feature 407107..407871
/locus_tag="MA5_01655"
/note="ATPases involved in chromosome partitioning [Cell
division and chromosome partitioning]; Region: Soj;
COG1192"
/db_xref="CDD:224113"
misc_feature 407134..>407544
/locus_tag="MA5_01655"
/note="ArsA ATPase functionas as an efflux pump located on
the inner membrane of the cell. This ATP-driven oxyanion
pump catalyzes the extrusion of arsenite, antimonite and
arsenate. Maintenance of a low intracellular concentration
of oxyanion produces...; Region: ArsA; cd02035"
/db_xref="CDD:238992"
misc_feature 407134..407157
/locus_tag="MA5_01655"
/note="P loop; other site"
/db_xref="CDD:238992"
misc_feature order(407140..407142,407146..407157,407221..407223,
407476..407478)
/locus_tag="MA5_01655"
/note="Nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:238992"
misc_feature order(407221..407229,407476..407490)
/locus_tag="MA5_01655"
/note="DTAP/Switch II; other site"
/db_xref="CDD:238992"
misc_feature 407221..407229
/locus_tag="MA5_01655"
/note="Switch I; other site"
/db_xref="CDD:238992"
misc_feature <407458..407655
/locus_tag="MA5_01655"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:238997"
misc_feature 407476..407478
/locus_tag="MA5_01655"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:238997"
gene 407861..408721
/locus_tag="MA5_01660"
/db_xref="GeneID:12007213"
CDS 407861..408721
/locus_tag="MA5_01660"
/note="COG1475 Predicted transcriptional regulators"
/codon_start=1
/transl_table=11
/product="stage 0 sporulation protein J (spo0J)"
/protein_id="YP_005404592.1"
/db_xref="GI:383486912"
/db_xref="GeneID:12007213"
/translation="MVKNKGLGRGLSSLLGEEVLPIESEIVQIINIDKIKPNENQPRK
HFEYNKIKELADSILNNGLLQPIIIDNNFQIIVGERRWRACKLAKVLEIPVIIKNFDT
RESMEVALIENIQRTDLTVMEEARGFKYLVENFNYTVEKLAERLGKSRSHIANLLRLN
NLPQSIQDKLNENILSMGHARCLINHEYAEEIADHIINHDLNVRQTEALVRQWHKNEY
KKSSNNNNKVDKLCVKDNVIDNDLELLVKALSKKFGIKITIDNCRLGGKLMFHYKNLE
ELDLILSKLN"
misc_feature 407933..408703
/locus_tag="MA5_01660"
/note="Stage 0 sporulation protein J (antagonist of Soj)
containing ParB-like nuclease domain [Transcription];
Region: Spo0J; COG1475"
/db_xref="CDD:31664"
misc_feature 407948..408202
/locus_tag="MA5_01660"
/note="ParB-like nuclease domain; Region: ParB;
smart00470"
/db_xref="CDD:197744"
misc_feature 408260..>408373
/locus_tag="MA5_01660"
/note="KorB domain; Region: KorB; pfam08535"
/db_xref="CDD:149550"
gene 408893..410560
/locus_tag="MA5_01665"
/db_xref="GeneID:12007214"
CDS 408893..410560
/locus_tag="MA5_01665"
/note="COG0488 ATPase components of ABC transporters with
duplicated ATPase domains"
/codon_start=1
/transl_table=11
/product="putative ABC transporter ATP-binding protein"
/protein_id="YP_005404593.1"
/db_xref="GI:383486913"
/db_xref="GeneID:12007214"
/translation="MSYQYVYEMVGLSKIINGKQILKETNLSFLPKAKIGIIGPNGAG
KSTLLKIMAGIDKEFEGKATAKIGIKVGYLPQEPYLDSTKNVFDNIVEGLREKTKLID
EFNDISNKFTDKMTNEEMQQLFEKQAELQEKIDNCNGWNLEREIEIAMLALRCPPKEA
EINKISGGEKRRIALCKLLLEKPDMLLLDEPTNHLDAESVSWLEDYLKYYEGTVIVIT
HDRYFLDNVTEWILEIDRGNCIPWKSNYSSWLEQKQKKLALESKEDDDRKKQLSRELE
WIRQTPKARQSKNKARITAYQELLNKQQEYKIDPTQIIIPNGPRLGDLVIEAEHIAKK
FNNKILLSDFSFKVPRGAIVGIIGPNGAGKSTLFNIITGKVMPDSGSIKIGPTVKLGY
VDQSRDHLDDNKTIWEEISEGLDELQLGNRIIKSRAYCAAFNFRGGDQQKKVGQLSGG
ERNRVHLAKLLKEGANVILLDEPSNDLDIDTLRALEDAILDFAGCVLVISHDRWFLDR
IATHIISYDQENNATWFEGNYQDYHEYMLSTNGENIFTPKYKHKKLI"
misc_feature 408893..410554
/locus_tag="MA5_01665"
/note="putative ABC transporter ATP-binding protein;
Reviewed; Region: PRK11819"
/db_xref="CDD:183324"
misc_feature 408914..>409120
/locus_tag="MA5_01665"
/note="ABCF_EF-3 Elongation factor 3 (EF-3) is a
cytosolic protein required by fungal ribosomes for in
vitro protein synthesis and for in vivo growth. EF-3
stimulates the binding of the EF-1: GTP: aa-tRNA ternary
complex to the ribosomal A site by facilitated...; Region:
ABCF_EF-3; cd03221"
/db_xref="CDD:72980"
misc_feature <409376..409603
/locus_tag="MA5_01665"
/note="ABCF_EF-3 Elongation factor 3 (EF-3) is a
cytosolic protein required by fungal ribosomes for in
vitro protein synthesis and for in vivo growth. EF-3
stimulates the binding of the EF-1: GTP: aa-tRNA ternary
complex to the ribosomal A site by facilitated...; Region:
ABCF_EF-3; cd03221"
/db_xref="CDD:72980"
misc_feature 409586..409789
/locus_tag="MA5_01665"
/note="ABC transporter; Region: ABC_tran_2; pfam12848"
/db_xref="CDD:205105"
misc_feature 409868..410446
/locus_tag="MA5_01665"
/note="ABCF_EF-3 Elongation factor 3 (EF-3) is a
cytosolic protein required by fungal ribosomes for in
vitro protein synthesis and for in vivo growth. EF-3
stimulates the binding of the EF-1: GTP: aa-tRNA ternary
complex to the ribosomal A site by facilitated...; Region:
ABCF_EF-3; cd03221"
/db_xref="CDD:72980"
gene 410563..410874
/locus_tag="MA5_01670"
/db_xref="GeneID:12007215"
CDS 410563..410874
/locus_tag="MA5_01670"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404594.1"
/db_xref="GI:383486914"
/db_xref="GeneID:12007215"
/translation="MSFTQILLILFVWILVTKPHDLFFIIKKLKTIKASFIKSFFIKD
IDESLETEQINFYLKRIINLEGYYYGNYDLTTIKEKYYTLIINNAFIENEIVPDLIEK
H"
misc_feature 410662..410832
/locus_tag="MA5_01670"
/note="Protein of unknown function (DUF2672); Region:
DUF2672; pfam10878"
/db_xref="CDD:220894"
gene 410909..411736
/locus_tag="MA5_01675"
/db_xref="GeneID:12007216"
CDS 410909..411736
/locus_tag="MA5_01675"
/EC_number="2.5.1.55"
/note="COG2877 3-deoxy-D-manno-octulosonic acid (KDO)
8-phosphate synthase"
/codon_start=1
/transl_table=11
/product="2-dehydro-3-deoxyphosphooctonate aldolase"
/protein_id="YP_005404595.1"
/db_xref="GI:383486915"
/db_xref="GeneID:12007216"
/translation="MKKVVKLNNIKIGNDLQFVLIAGPCQIEGKDHALFMAEKLMKLT
SKLSIPFIYKSSFDKANRTSINGIRGLGIEKGLEILSKVKSEFDCPIITDVHSESQCI
ETAKVVDILQIPAFLCRQTDLLKAAAKTGKIVKVKKGQFLAPWDMKNVQKKLEVFGAK
DILFTERGSCFGYNNLVSDMRSLAIMSELNVPVVFDATHSVQQPGGRGGSSGGERKYV
ELLAKAAISVGIAGIYMEVHQDPDNAPSDGPCMIKLDNLESILIKLKKYDKITKEIV"
misc_feature 410909..411727
/locus_tag="MA5_01675"
/note="3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate
synthase [Cell envelope biogenesis, outer membrane];
Region: KdsA; COG2877"
/db_xref="CDD:225432"
misc_feature 410930..411727
/locus_tag="MA5_01675"
/note="DAHP synthetase I family; Region: DAHP_synth_1;
pfam00793"
/db_xref="CDD:216123"
gene complement(413276..413608)
/locus_tag="MA5_01680"
/db_xref="GeneID:12007217"
CDS complement(413276..413608)
/locus_tag="MA5_01680"
/note="COG0316 Uncharacterized conserved protein"
/codon_start=1
/transl_table=11
/product="HESB protein (hesB1)"
/protein_id="YP_005404596.1"
/db_xref="GI:383486916"
/db_xref="GeneID:12007217"
/translation="MTITITDRAFERIYELIELEKDKNLVLRVSVDSGGCSGLMYNYE
LVSKDNIEKDDYVFTRHNATIIIDSISQKFMLNCTLDFIEELGSSYFNVSNPQAKAKC
GCGNSFSV"
misc_feature complement(413279..413599)
/locus_tag="MA5_01680"
/note="Iron-sulfur cluster assembly accessory protein;
Region: TIGR00049"
/db_xref="CDD:232799"
gene 413858..415009
/locus_tag="MA5_01685"
/db_xref="GeneID:12007218"
CDS 413858..415009
/locus_tag="MA5_01685"
/note="COG0232 dGTP triphosphohydrolase"
/codon_start=1
/transl_table=11
/product="deoxyguanosinetriphosphate
triphosphohydrolase-like protein"
/protein_id="YP_005404597.1"
/db_xref="GI:383486917"
/db_xref="GeneID:12007218"
/translation="MLASYASDPLKSRGRLYKEIPTYYRNEFERDRDRIIHTNAFRRL
QYKTQVFINHEGDHYRNRLTHSLEVSTVARSVANTLNLSSDLAETIALAHDLGHTPFG
HAGERALNECMKEYHGFSHNSQSLKILTLLEKRYAAYNGVNLTWEVLEGIVKHNGPIL
GAINEYVAEYNKQNDLELSTYASAEAQVASLADDISYISHDLEDSIGAKIIDFDSLAE
LQYIDNYVFELKAKFKDISPSCLIYEVVRKLIHELITDLLWQTKENLNKEKITNIDEI
RNLHYPIVDFTEKTNERINEIKKFLHKRVYESNKMIAISIKCTKIVQGLFKIYMDDIN
LLPTNWKILIDSNKTYSKARVIADYIAGMTDRFAIQEYNQLCSPNFNNI"
misc_feature 413858..415006
/locus_tag="MA5_01685"
/note="deoxyguanosinetriphosphate triphosphohydrolase-like
protein; Provisional; Region: PRK01286"
/db_xref="CDD:234934"
misc_feature 414035..414514
/locus_tag="MA5_01685"
/note="Metal dependent phosphohydrolases with conserved
'HD' motif; Region: HDc; cd00077"
/db_xref="CDD:238032"
misc_feature order(414050..414052,414137..414142,414434..414436)
/locus_tag="MA5_01685"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:238032"
misc_feature 414140..414142
/locus_tag="MA5_01685"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238032"
misc_feature 414707..414979
/locus_tag="MA5_01685"
/note="Phosphohydrolase-associated domain; Region:
HD_assoc; pfam13286"
/db_xref="CDD:222025"
gene 415018..416748
/gene="argS"
/locus_tag="MA5_01690"
/db_xref="GeneID:12007219"
CDS 415018..416748
/gene="argS"
/locus_tag="MA5_01690"
/EC_number="6.1.1.19"
/note="COG0018 Arginyl-tRNA synthetase"
/codon_start=1
/transl_table=11
/product="arginyl-tRNA synthetase"
/protein_id="YP_005404598.1"
/db_xref="GI:383486918"
/db_xref="GeneID:12007219"
/translation="MNIFNQLKQDIIAASQKLYNNKEIANTATIETPKDSFNGDLSSN
IAMIIASKESIAPREVALKFKEVLVTLPYIASIEIAGPGFINFTIKAESWQAAIKDIL
QHEEKFFEIDIDKNSNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKE
YYVNDAGSQINDLVSTVLLRYKEALGEPITIPVGLYPGEYLIPLGEILSKEYGNKLLT
MNDVERFKIIKSFAVEKMLDLNRKDLADLGIKHDVFFSEQSLYDKGEIEKTVKLLERM
GLIYEGTLPAPKGKVHEDWEYRVQKLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAK
DKIDRGANHLIYVLGADHSGYVKRIEAIVKALGQEKVKVDVKICQLVNFVENGVPIKM
SKRLGSFASVQDVNKEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAN
VRTKSILSKARELMPEAYNSFKEGKYNLSLLSSEEEIEIIKLLAAWTKTLEASVKYFE
PHRIAFYLINLASKFHSMWNFGKENSDYRFIIENNKELTLARLALASVIQKIIASGLE
VIGVEPMVTM"
misc_feature 415024..416745
/gene="argS"
/locus_tag="MA5_01690"
/note="arginyl-tRNA synthetase; Reviewed; Region: argS;
PRK01611"
/db_xref="CDD:179308"
misc_feature 415030..415284
/gene="argS"
/locus_tag="MA5_01690"
/note="Arginyl tRNA synthetase N terminal domain; Region:
Arg_tRNA_synt_N; pfam03485"
/db_xref="CDD:202664"
misc_feature 415369..416208
/gene="argS"
/locus_tag="MA5_01690"
/note="catalytic core domain of arginyl-tRNA synthetases;
Region: ArgRS_core; cd00671"
/db_xref="CDD:185675"
misc_feature order(415381..415383,415390..415392,415396..415398,
415414..415416,415423..415425,415990..415992,
416002..416004,416071..416073,416080..416082)
/gene="argS"
/locus_tag="MA5_01690"
/note="active site"
/db_xref="CDD:185675"
misc_feature 415414..415425
/gene="argS"
/locus_tag="MA5_01690"
/note="HIGH motif; other site"
/db_xref="CDD:185675"
misc_feature <416188..416304
/gene="argS"
/locus_tag="MA5_01690"
/note="nucleotidyl transferase superfamily; Region:
nt_trans; cl00015"
/db_xref="CDD:212170"
misc_feature 416191..416202
/gene="argS"
/locus_tag="MA5_01690"
/note="KMSK motif region; other site"
/db_xref="CDD:185675"
misc_feature order(416311..416313,416329..416331,416359..416361,
416371..416376,416380..416385,416557..416559,
416578..416580,416587..416589,416596..416598)
/gene="argS"
/locus_tag="MA5_01690"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153408"
misc_feature 416353..416745
/gene="argS"
/locus_tag="MA5_01690"
/note="DALR anticodon binding domain; Region: DALR_1;
smart00836"
/db_xref="CDD:197905"
misc_feature order(416359..416361,416368..416373,416380..416385,
416596..416598)
/gene="argS"
/locus_tag="MA5_01690"
/note="anticodon binding site; other site"
/db_xref="CDD:153408"
gene 416811..417479
/locus_tag="MA5_01695"
/db_xref="GeneID:12007220"
CDS 416811..417479
/locus_tag="MA5_01695"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404599.1"
/db_xref="GI:383486919"
/db_xref="GeneID:12007220"
/translation="MTNNSKICLVSLICISGIYFGYQYYQNSKPVITIYPDNLPPKIR
PSIIENNQVASVYSNIYENLITQDTNIQTVKLLPDPEQPMIIDSRNQSQNDKIFDGMS
TLIPLIESNNNAKNATDLNIIKLEKVIKDKVSNAQNCRSNAGYKVQLGSVKSEAEAMA
EGAKIKKKFPKILKNVVITTKKVKYDDGKFFYLILAGEYSSLSQAQAVCKKLAYNKQS
CVLK"
misc_feature 417231..417476
/locus_tag="MA5_01695"
/note="Sporulation related domain; Region: SPOR;
pfam05036"
/db_xref="CDD:113793"
gene 417602..419818
/locus_tag="MA5_01700"
/db_xref="GeneID:12007221"
CDS 417602..419818
/locus_tag="MA5_01700"
/EC_number="5.99.1.-"
/note="COG0188 Type IIA topoisomerase (DNA gyrase/topo II,
topoisomerase IV), A subunit"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase IV subunit A"
/protein_id="YP_005404600.1"
/db_xref="GI:383486920"
/db_xref="GeneID:12007221"
/translation="MKEAKIENLDFGNALSERYLAYALSTIMSRSLPDVRDGLKPVHR
RLLYAMLQLRLEPNSGYKKCARVVGDVIGKYHPHGDVAVYDTLVRLAQHFSLRYPLID
GQGNFGSIDGDNAAAMRYTESRMTEICMLLMEDIDKDTVDFRSTYDDSDLEPVIMPAS
FPNLLANGSEGIAVGMATNIPPHNLHELCDALLYLIDNPQAGINDIMNFIKGPDFPTG
GIIIDKAEVINAAYTTGRGSFRVRSRWEKEELSYGTYQIVVTEIPYQIQKSKLIEQIA
ILLKDKKIPLISSIRDESTDIIRVVIEPRDRSCDPQIVMESLFKLTNLESRIQLNMNV
IGSNNVPRVMNILEILQEFLVHRKNIIIRRSTYLLNKIKQRLEILKVLRIVYLNLDEI
IEIIREEDEPKTIIMERFKISAIQVEVILNTRLRSLQKLEEHAIIDEHSNLQKQQAIL
EKILKNHKELWQIVKKEIKAVQTKFGLNTIIGARRTSFEEVDLTNQVVDITAFITKEP
ITIICSKMGWVRSLKGHNTDLSTIKYKEGDTEKFIIEAYTTDKILIISSKGRFFTLLA
DNISKGKGTGGVSIKLLVDIGNNDITNILVYKPNQLLLLASSIGKGFLVNSNEVIAQT
KTGKQIMNIPEGYSCIACLPVNGDSIACIGESRRLLVFNIDEIPEMKKGQGVVLQRFK
NAKLLDIKIFNKQDGLSWNDGTKIQLEKNIVAFLGKRGGFGTFPPIGFPKNNRFSP"
misc_feature 417617..419812
/locus_tag="MA5_01700"
/note="DNA topoisomerase IV, A subunit, proteobacterial;
Region: parC_Gneg; TIGR01062"
/db_xref="CDD:130134"
misc_feature 417683..419014
/locus_tag="MA5_01700"
/note="DNA Topoisomerase, subtype IIA; domain A';
bacterial DNA topoisomerase IV (C subunit, ParC),
bacterial DNA gyrases (A subunit, GyrA),mammalian DNA
toposiomerases II. DNA topoisomerases are essential
enzymes that regulate the conformational changes in
DNA...; Region: TOP4c; cd00187"
/db_xref="CDD:29149"
misc_feature order(417683..417766,417779..417928,417932..417988,
417992..418063,418070..418072)
/locus_tag="MA5_01700"
/note="CAP-like domain; other site"
/db_xref="CDD:29149"
misc_feature 417959..417961
/locus_tag="MA5_01700"
/note="active site"
/db_xref="CDD:29149"
misc_feature order(418760..418768,418775..418786,418808..418813,
418853..418903)
/locus_tag="MA5_01700"
/note="primary dimer interface [polypeptide binding];
other site"
/db_xref="CDD:29149"
gene complement(420160..421482)
/locus_tag="MA5_01705"
/db_xref="GeneID:12007222"
CDS complement(420160..421482)
/locus_tag="MA5_01705"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404601.1"
/db_xref="GI:383486921"
/db_xref="GeneID:12007222"
/translation="MKKLLLAASIVYFASACLAEEKTTPFLSNSDTKIKLEGFYLFES
GYIKQNHLILFDKNVTDNRKKLGFYTEVAFAATITKTINDVIAGAKIVLQPTTKAKTA
ASYNGSHIFIETSYGKVELGSPVDASAKLRVTGNKVTAGTGGWYRYALLDGQYMRYNG
LKPDFDTNVNFYLESYSNSFDQINEKTEKARRLNFFTPKMKGFQAGISYTPDTANTGG
NKNINNLTLQSSGRNGISVSRTGIKTFALGNGETMTINQNIRDAFSAGLTYEHAISED
ADLKLSMTGEYGKPARRLIHSKVDGTTKTIEVLNTYKLSNLKAYNLGAVFTYGNFSCG
ASYGNLGKSLTSKEYYKVGRNTYYYNGAVAYGQGPIKTSLAYLKASRYKNTVNAVSLA
TEYKIMPGLLPYAEISHFQAKGKPVYYPEAPSKTTRGTVGLIGTKLKF"
misc_feature complement(420328..421443)
/locus_tag="MA5_01705"
/note="Gram-negative porin; Region: Porin_4; pfam13609"
/db_xref="CDD:205787"
gene 421749..422315
/gene="dcd"
/locus_tag="MA5_01710"
/db_xref="GeneID:12007223"
CDS 421749..422315
/gene="dcd"
/locus_tag="MA5_01710"
/EC_number="3.5.4.13"
/note="COG0717 Deoxycytidine deaminase"
/codon_start=1
/transl_table=11
/product="deoxycytidine triphosphate deaminase"
/protein_id="YP_005404602.1"
/db_xref="GI:383486922"
/db_xref="GeneID:12007223"
/translation="MAIMSDKWIKDAVMNQNMIRPFAAKQVRVHNKEKIISYGLSSYG
YDARVSNEFKIFTNINSTTVDPKNFSEYNLVDREVDACIIPPNSFALGRTIEYFKIPR
DVLVICVGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGACQFLFL
KSDQICDTSYAERQGKYMKQVGVTLPLT"
misc_feature 421962..422225
/gene="dcd"
/locus_tag="MA5_01710"
/note="Trimeric dUTP diphosphatases; Region:
trimeric_dUTPase; cd07557"
/db_xref="CDD:143638"
misc_feature order(421995..421997,422010..422015,422019..422021,
422067..422069,422073..422090,422103..422111,
422121..422123,422130..422132,422151..422153,
422157..422159,422163..422165,422169..422171,
422181..422195,422202..422204,422214..422216)
/gene="dcd"
/locus_tag="MA5_01710"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:143638"
misc_feature order(422079..422087,422121..422129,422136..422138,
422148..422153)
/gene="dcd"
/locus_tag="MA5_01710"
/note="active site"
/db_xref="CDD:143638"
gene 422512..422970
/locus_tag="MA5_01715"
/db_xref="GeneID:12007224"
CDS 422512..422970
/locus_tag="MA5_01715"
/note="COG1952 Preprotein translocase subunit SecB"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecB"
/protein_id="YP_005404603.1"
/db_xref="GI:383486923"
/db_xref="GeneID:12007224"
/translation="MSTINTDTSEAMPHISVNAQYIKDLSLENPSAPSSLAALDQRPQ
IDLSLDINITNLSEENFYEVELNIEAIARNEKYKLFQIELKYAGVFNLINIDSEQHPI
LLSVHCPAMIFPFARKIIASCTQDAGFQPLMIDPIDFGALYHKKMSEHQN"
misc_feature 422554..422946
/locus_tag="MA5_01715"
/note="Preprotein translocase subunit SecB. SecB is a
cytoplasmic component of the multisubunit membrane-bound
enzyme termed Sec protein translocase, which is the main
constituent of the General Secretory (type II) Pathway
involved in translocation of nascent...; Region:
Translocase_SecB; cd00557"
/db_xref="CDD:238312"
misc_feature order(422581..422583,422593..422595,422752..422754,
422758..422760)
/locus_tag="MA5_01715"
/note="SecA binding site; other site"
/db_xref="CDD:238312"
misc_feature order(422749..422751,422755..422757,422761..422763,
422767..422769)
/locus_tag="MA5_01715"
/note="Preprotein binding site; other site"
/db_xref="CDD:238312"
gene 423167..423880
/locus_tag="MA5_01720"
/db_xref="GeneID:12007225"
CDS 423167..423880
/locus_tag="MA5_01720"
/note="COG0745 Response regulators consisting of a
CheY-like receiver domain and a winged-helix DNA-binding
domain"
/codon_start=1
/transl_table=11
/product="transcriptional activator protein CZCR (czcR)"
/protein_id="YP_005404604.1"
/db_xref="GI:383486924"
/db_xref="GeneID:12007225"
/translation="MRVLLIEDESEMANLIEITLASEGIVCDKASVGVEGLRLGKVGI
YDLVILDLMLPDINGFEILLRLRAAKIKTPILILSSLTDTDQKITSFSSGADDYLTKP
FVREELIARIKAIVRRSKGHAASIFRFDKISVNLDTRSVEVDGKKLHLTNKEYSILEL
LILRRGTILTKEMFLNHLYSTVDEPEMKIIDVFICKLRKKLSDAAGGRDYIDTVWGRG
YMLKEYDELQQKELLAQGA"
misc_feature 423167..423835
/locus_tag="MA5_01720"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:223816"
misc_feature 423176..423511
/locus_tag="MA5_01720"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature order(423185..423190,423317..423319,423341..423343,
423401..423403,423458..423460,423467..423472)
/locus_tag="MA5_01720"
/note="active site"
/db_xref="CDD:238088"
misc_feature 423317..423319
/locus_tag="MA5_01720"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature order(423326..423331,423335..423343)
/locus_tag="MA5_01720"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature 423467..423475
/locus_tag="MA5_01720"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature 423545..423829
/locus_tag="MA5_01720"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:238225"
misc_feature order(423617..423619,423674..423679,423731..423733,
423740..423742,423764..423769,423803..423805,
423818..423820)
/locus_tag="MA5_01720"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238225"
gene 423884..424705
/gene="queF"
/locus_tag="MA5_01725"
/db_xref="GeneID:12007226"
CDS 423884..424705
/gene="queF"
/locus_tag="MA5_01725"
/note="COG2904 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="7-cyano-7-deazaguanine reductase"
/protein_id="YP_005404605.1"
/db_xref="GI:383486925"
/db_xref="GeneID:12007226"
/translation="MPLSTSLLGKKNTYKDSYDATLLFKIPRINNRNVLGIDSNHLPF
YGVDIWNTYEISCLNKNGKPLVGIGTFYIPADSENIVESKSFKLYLNSFNNFIIESIE
ELERIILQDLSNVTYAKVTGRIFPINTKIEFGIPSGKNIDNLDIVCNNYGPPDNSLIE
YEDVLVEEEIYSNLFKSNCLVTGQPDWGTIVIKYKGKKLKYDSFLRYLISFRNFNEFA
EQCAERIFIDIKNSINLDFLSIYIVYTRRGGIDICPYRSTDKSYTLPNDKRLIRQ"
misc_feature 423884..424276
/gene="queF"
/locus_tag="MA5_01725"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG2904"
/db_xref="CDD:225456"
misc_feature 423887..424702
/gene="queF"
/locus_tag="MA5_01725"
/note="7-cyano-7-deazaguanine reductase; Provisional;
Region: queF; PRK11792"
/db_xref="CDD:236986"
misc_feature 424289..424702
/gene="queF"
/locus_tag="MA5_01725"
/note="Enzyme related to GTP cyclohydrolase I [General
function prediction only]; Region: COG0780"
/db_xref="CDD:223851"
gene complement(424733..425293)
/locus_tag="MA5_01730"
/db_xref="GeneID:12007227"
CDS complement(424733..425293)
/locus_tag="MA5_01730"
/note="COG3820 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="putative cytoplasmic protein"
/protein_id="YP_005404606.1"
/db_xref="GI:383486926"
/db_xref="GeneID:12007227"
/translation="MNSQKILPLLPRATAIWLIENTSLTFKQIADFCGIHEFEIKGMA
DGEVAQSIKGLNPIANGQLTLEEIERCSKDPNTNLQISYSPADELMQNQKKHRAKYIP
IARRQDKPDAIYWLLSNYPNIQDHQIIKLIGTTKTTIDAIRTRSHWNMHSIRPRDPVL
LGICSQIDLNKIVETLKLTQNTIKEL"
misc_feature complement(<424736..425284)
/locus_tag="MA5_01730"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3820"
/db_xref="CDD:226341"
gene complement(425350..426747)
/locus_tag="MA5_01735"
/db_xref="GeneID:12007228"
CDS complement(425350..426747)
/locus_tag="MA5_01735"
/note="COG1282 NAD/NADP transhydrogenase beta subunit"
/codon_start=1
/transl_table=11
/product="NAD(p) transhydrogenase subunit beta"
/protein_id="YP_005404607.1"
/db_xref="GI:383486927"
/db_xref="GeneID:12007228"
/translation="MSLQIIQLLYLLAAVCFILSLKFLSSQKQARLGSIIGILGMTIA
VGITFCLPDFTHKLQIIITILVGGIIGGIIALKISMTAIPQLVACFHSFVGLAAVFVA
YATILAPENFSIGISGNLPVNSLIEISIGVSIGALTFSGSIVAFLKLQGLMKSNTFKF
YGQQYICLFTAIILVIIVVAFIRSENIFLFNLIVLLSLLSGILLIIPVGSADMPVIVS
MLNSYSGFATAGIGFTLSNSLLIITGSLIGSSGAILSYIMCKAMNRSLIKVIFGAFLP
PPTGINKDICDDKIAKISTPEEAAHLLLNASSVIIVPGYGMAVAQSQHSIKEMVDILE
RSDINVRFAIHPVAGRMPGHMNVLLAEANIDYEKVLELEEINRDFAITDVVLVIGAND
VTNPSAKNDPNSPIYGMPILDVEKARTILFIKRSMASGYAGIANELFYHNKTFMLFGD
AKKVVDEIVKFLNED"
misc_feature complement(425362..426705)
/locus_tag="MA5_01735"
/note="NAD(P) transhydrogenase beta subunit; Region: PNTB;
pfam02233"
/db_xref="CDD:216941"
misc_feature complement(425362..426705)
/locus_tag="MA5_01735"
/note="NAD/NADP transhydrogenase beta subunit [Energy
production and conversion]; Region: PntB; COG1282"
/db_xref="CDD:224201"
gene complement(426846..427577)
/locus_tag="MA5_01740"
/db_xref="GeneID:12007229"
CDS complement(426846..427577)
/locus_tag="MA5_01740"
/note="COG3047 Outer membrane protein W"
/codon_start=1
/transl_table=11
/product="OmpW family outer-membrane protein"
/protein_id="YP_005404608.1"
/db_xref="GI:383486928"
/db_xref="GeneID:12007229"
/translation="MLRIVKKLWVILFISNISINSFAKNIYDNVDDANYDSTQYYENE
GSLLFKMRLGGIFASAKQKGLPTHSSIQAVSVGEVAKNGYGGDASTTIFFNNYLAAEL
SLGFNVLRTKYTSLAAVAHNYGVDNVKLGKHKPIYMIPATLTGQFHIAPYGGIRPYIG
IGYHGSYMLTQATGLKIRNGYNIVGQIGVDFYAKDDTLINMDVRQFFLKPKLEYKPNL
VGNKKVTSKVKLNPLIVSIGIGFTF"
misc_feature complement(426849..427511)
/locus_tag="MA5_01740"
/note="Outer membrane protein W [Cell envelope biogenesis,
outer membrane]; Region: OmpW; COG3047"
/db_xref="CDD:32861"
gene 427725..428609
/locus_tag="MA5_01745"
/db_xref="GeneID:12007230"
CDS 427725..428609
/locus_tag="MA5_01745"
/note="COG0697 Permeases of the drug/metabolite
transporter (DMT) superfamily"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404609.1"
/db_xref="GI:383486929"
/db_xref="GeneID:12007230"
/translation="MNDALKTYLNGICWFLLSLVTSSINDVMSKYLGTRLHSFEVAFF
RFFFSSIVLLPFVVYYGKNALKTSRPFVHVLRGLLLFFGMTSWTYGLTIAPVTTATVV
SFAIPLFTLILAVFILNENIIWQRWVVTVVGFIGLVVMLKPHTKDFNPEILYLILAAI
SFAMLDIINKKFVVKESMLSMLFYSAIVTAMVSLPVAMQYWITPSSFELALLFVLGSS
GSFILFFLLKAFSIVDATATAPYRYLELVISAIAAYFIFNEFPDKSTVHGAVIIIPAT
LFIIYSEKKSMSSKHESQ"
misc_feature <427875..428105
/locus_tag="MA5_01745"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:216178"
misc_feature <427929..428567
/locus_tag="MA5_01745"
/note="Permeases of the drug/metabolite transporter (DMT)
superfamily [Carbohydrate transport and metabolism / Amino
acid transport and metabolism / General function
prediction only]; Region: RhaT; COG0697"
/db_xref="CDD:223769"
misc_feature 428202..428567
/locus_tag="MA5_01745"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:216178"
gene 428596..429852
/locus_tag="MA5_01750"
/db_xref="GeneID:12007231"
CDS 428596..429852
/locus_tag="MA5_01750"
/note="COG0477 Permeases of the major facilitator
superfamily"
/codon_start=1
/transl_table=11
/product="proline/betaine transporter (proP1)"
/protein_id="YP_005404610.1"
/db_xref="GI:383486930"
/db_xref="GeneID:12007231"
/translation="MNRSKLVFSSSIANTFEWYDYVLFSYFAPIIGVKFFPNDDVNTS
LLHVFSVFAIGYLARPLGGIFFGVIGDRFGRKVALTSALFCMSAPTVLIGILPTYNTI
GITATIVMICVRILQGLSMGGALTGSISFVIEHTSHKYRGFICSIAMSSICSGLLFGS
IVFYIVKNMLTASQFDNFGWRIPFLIGVFIIFAAFYIKKNTHETPSFTNLRDQQKILH
SPLKKVIINHWLDILISIFINAPGSIIFYLATIYLVSFLKISRNFTENEINNLASICY
VIMMVVTLLSGYLSDIIGRKKIFLINLIIIIVTMPFLLKNFENGDFTSVIISQFILTI
LAASYIGPEPALQAEFYPTNIRNTALSISYNTATSIFGGTTPLIFEYLVQQTGHVTFA
VFYVILSCIFALFALSFYKDRSLDNI"
misc_feature 428614..429825
/locus_tag="MA5_01750"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 428635..429807
/locus_tag="MA5_01750"
/note="metabolite-proton symporter; Region: 2A0106;
TIGR00883"
/db_xref="CDD:233168"
misc_feature order(428656..428658,428665..428673,428677..428682,
428749..428751,428758..428763,428770..428772,
428782..428787,428791..428796,428956..428961,
428968..428973,428980..428985,428992..428994,
429028..429033,429040..429045,429061..429063,
429322..429324,429331..429336,429343..429348,
429355..429357,429397..429399,429409..429411,
429421..429423,429430..429432,429442..429444,
429592..429594,429601..429606,429613..429615,
429625..429630,429637..429639,429670..429675,
429685..429690,429697..429702,429709..429711)
/locus_tag="MA5_01750"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 430012..430086
/locus_tag="MA5_t04333"
/db_xref="GeneID:12007232"
tRNA 430012..430086
/locus_tag="MA5_t04333"
/product="tRNA-Thr"
/db_xref="GeneID:12007232"
gene 430106..430408
/gene="secG"
/locus_tag="MA5_01755"
/db_xref="GeneID:12007233"
CDS 430106..430408
/gene="secG"
/locus_tag="MA5_01755"
/note="COG1314 Preprotein translocase subunit SecG"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecG"
/protein_id="YP_005404611.1"
/db_xref="GI:383486931"
/db_xref="GeneID:12007233"
/translation="MIDIFLFVHITISILLIIVILMQRSGSGGISGISGDNNMGVVSA
KTVGNFLSKSTIILTTLFLINAIVLANLSAKKQSDLVSKINEIEENQADNSLPIAK"
misc_feature 430106..430342
/gene="secG"
/locus_tag="MA5_01755"
/note="Preprotein translocase subunit SecG [Intracellular
trafficking and secretion]; Region: SecG; COG1314"
/db_xref="CDD:31505"
gene 436838..438211
/gene="cysS"
/locus_tag="MA5_01770"
/db_xref="GeneID:12007234"
CDS 436838..438211
/gene="cysS"
/locus_tag="MA5_01770"
/EC_number="6.1.1.16"
/note="COG0215 Cysteinyl-tRNA synthetase"
/codon_start=1
/transl_table=11
/product="cysteinyl-tRNA synthetase"
/protein_id="YP_005404612.1"
/db_xref="GI:383486932"
/db_xref="GeneID:12007234"
/translation="MKLHLYNTLTRTKEVFNPQDPANIKMYVCGPTVYDNPHIGNSRS
VVVYDLLYRIIIKIFGKKAVKYVRNITDVDDKIIDRAELLGITINDLTDKVTREFHIN
MEYLGCMLPTIEPKATEHIDVMIEIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNR
NLEAMFEGVRIENSKTKKNPQDFVLWKPAKKNEPENINFTSPWGLGRPGWHIECSAMS
YKYLGQNFDIHGGGADLIFPHHTNEIAQSRCAFPSSTYAKYWIHNGFLTVNGSKMSKS
LGNFITVRDLMDKQIQGEVVRLFLLSSHYRRPLDYNDKAIDDAKKTLDYWYRAIEHIN
VQKVDLPSNFMRSLFDDMNTPLAIKIINDYAKCVFISKTEAERKFNASAIITCANFIG
LMRKTQYEWFNRDVDEFYINELINKRLKAKKQKNWLLADKIRNQLLEKKIILEDKSNY
ITIWRKE"
misc_feature 436838..438208
/gene="cysS"
/locus_tag="MA5_01770"
/note="cysteinyl-tRNA synthetase; Validated; Region: cysS;
PRK00260"
/db_xref="CDD:234705"
misc_feature 436847..>437212
/gene="cysS"
/locus_tag="MA5_01770"
/note="catalytic core domain of cysteinyl tRNA synthetase;
Region: CysRS_core; cd00672"
/db_xref="CDD:173899"
misc_feature order(436922..436933,436949..436951,436955..436960,
436967..436972,437042..437044,437048..437050,
437189..437191)
/gene="cysS"
/locus_tag="MA5_01770"
/note="active site"
/db_xref="CDD:173899"
misc_feature 436949..436960
/gene="cysS"
/locus_tag="MA5_01770"
/note="HIGH motif; other site"
/db_xref="CDD:173899"
misc_feature <437465..437773
/gene="cysS"
/locus_tag="MA5_01770"
/note="catalytic core domain of cysteinyl tRNA synthetase;
Region: CysRS_core; cd00672"
/db_xref="CDD:173899"
misc_feature 437651..437665
/gene="cysS"
/locus_tag="MA5_01770"
/note="KMSKS motif; other site"
/db_xref="CDD:173899"
misc_feature 437774..438205
/gene="cysS"
/locus_tag="MA5_01770"
/note="Anticodon-binding domain of class Ia aminoacyl tRNA
synthetases and similar domains; Region:
Anticodon_Ia_like; cl12020"
/db_xref="CDD:245839"
misc_feature order(437777..437779,437789..437791,437798..437800,
437807..437809,437819..437824,437828..437833,
437912..437914,437933..437935,437942..437944,
437951..437953)
/gene="cysS"
/locus_tag="MA5_01770"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153408"
misc_feature order(437807..437809,437816..437821,437828..437833,
437951..437953)
/gene="cysS"
/locus_tag="MA5_01770"
/note="anticodon binding site; other site"
/db_xref="CDD:153408"
gene 438619..439509
/gene="rpsB"
/locus_tag="MA5_01775"
/db_xref="GeneID:12007235"
CDS 438619..439509
/gene="rpsB"
/locus_tag="MA5_01775"
/note="COG0052 Ribosomal protein S2"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S2"
/protein_id="YP_005404613.1"
/db_xref="GI:383486933"
/db_xref="GeneID:12007235"
/translation="MSKISPINIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHII
DLRQSAALMSVALNAIYETVKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNNRWLGG
MLTNWKTIACSIEKLEKLEKTLESEEARICYTKKEILDMSRKKDKLLLSLAGIRNLNS
KPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYC
SLFADAALQGLEESMKVSGVDIGTMQDHTDKALTSSKTVSKLKQSKKLSKTQNIDEET
NTEFDQALGGACENNNSDNT"
misc_feature 438652..439299
/gene="rpsB"
/locus_tag="MA5_01775"
/note="Ribosomal protein S2 (RPS2), involved in formation
of the translation initiation complex, where it might
contact the messenger RNA and several components of the
ribosome. It has been shown that in Escherichia coli RPS2
is essential for the binding of...; Region: RPS2; cd01425"
/db_xref="CDD:100106"
misc_feature order(438700..438705,438730..438738,438910..438912,
438916..438924,438931..438936,439153..439155,
439162..439164)
/gene="rpsB"
/locus_tag="MA5_01775"
/note="rRNA interaction site [nucleotide binding]; other
site"
/db_xref="CDD:100106"
misc_feature order(439159..439164,439168..439170,439210..439221)
/gene="rpsB"
/locus_tag="MA5_01775"
/note="S8 interaction site; other site"
/db_xref="CDD:100106"
misc_feature 439264..439281
/gene="rpsB"
/locus_tag="MA5_01775"
/note="putative laminin-1 binding site; other site"
/db_xref="CDD:100106"
gene 439664..440593
/gene="tsf"
/locus_tag="MA5_01780"
/db_xref="GeneID:12007236"
CDS 439664..440593
/gene="tsf"
/locus_tag="MA5_01780"
/note="COG0264 Translation elongation factor Ts"
/codon_start=1
/transl_table=11
/product="elongation factor Ts"
/protein_id="YP_005404614.1"
/db_xref="GI:383486934"
/db_xref="GeneID:12007236"
/translation="MSEINISAVVVKELREKTGAGMMDCKKALIETSGNFEEAIDFLR
KKGLAAAVKKSGRIASEGLTAVKVDGLISAVIEVNSETDFVARNKQFQDLVKDIVNLA
IIAQNIDTLKISKMQSGKSVEEEIIDNIAIIGENLTLRRMDILEISNGAIGSYVHNEV
VPHLGKISVLVGLESNAKDKVKLEALAKQIAVHVAGNNPQSIDTLSLDKSLIEREKKV
FFEKSKEEGKPNHIIEKMVEGRIRKFFSEVVLLHQNFLFEPKLTVAEVIKNAEQELSA
EIKITKFIRYALGEGIEHAEKNFADEVAAITQC"
misc_feature 439676..440578
/gene="tsf"
/locus_tag="MA5_01780"
/note="elongation factor Ts; Provisional; Region: tsf;
PRK09377"
/db_xref="CDD:236491"
misc_feature 439679..439792
/gene="tsf"
/locus_tag="MA5_01780"
/note="UBA/TS-N domain; Region: UBA; pfam00627"
/db_xref="CDD:201355"
misc_feature 439838..>440053
/gene="tsf"
/locus_tag="MA5_01780"
/note="Elongation factor TS; Region: EF_TS; pfam00889"
/db_xref="CDD:189759"
misc_feature 440105..440533
/gene="tsf"
/locus_tag="MA5_01780"
/note="Elongation factor TS; Region: EF_TS; pfam00889"
/db_xref="CDD:189759"
gene 440871..441050
/locus_tag="MA5_01785"
/db_xref="GeneID:12007237"
CDS 440871..441050
/locus_tag="MA5_01785"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404615.1"
/db_xref="GI:383486935"
/db_xref="GeneID:12007237"
/translation="MIASIWYAELGCASAIAFIFPLIFCVKLDYKCIGIFIINSLHDQ
YYKPDIMLERAIIIA"
gene complement(441786..443171)
/locus_tag="MA5_01790"
/db_xref="GeneID:12007238"
CDS complement(441786..443171)
/locus_tag="MA5_01790"
/note="COG1519 3-deoxy-D-manno-octulosonic-acid
transferase"
/codon_start=1
/transl_table=11
/product="3-deoxy-D-manno-octulosonic-acid transferase"
/protein_id="YP_005404616.1"
/db_xref="GI:383486936"
/db_xref="GeneID:12007238"
/translation="MMLLYYTLSFILLPVYFIIIFIRLLIGKEDIRRIQERFAIGKQR
QNSALDFIQMSVNKEGFTDHKTTSYVDMHRNASLMYKLSLERSYAHSLVWIHAASVGE
VMTALTLIHNISKLAPNVRFLITSWTNASAKILSTKLPKIATHQFLPIDNVIFTRKFL
RNWQPDLGIFIESELWPCTINEGAKYCKLLLINARISNKSFKAWLKRKRFFQLIIKNF
SKIIVQSERDLQKFNALGISDAMNLGNIKFANEKLLVNQEKLSKLILHLDNRRVLVFA
STHPEDEEVILPIINNLKEQFIDCYIILIPRHPERIKSIINNCKLHHLSATAKSQNDL
PVLNDDLYIVDRFGEMGLFFSVATISFIGGSFKQGGHNILEAAYFSNCIIFGPDMSKN
TDIAKGILQNNAAIQIKNGKDLLNTLTSLLNANNALKLKTYRENALKFVENNQKKILD
EYLQIIKQFLP"
misc_feature complement(441789..443171)
/locus_tag="MA5_01790"
/note="3-deoxy-D-manno-octulosonic-acid transferase;
Reviewed; Region: PRK05749"
/db_xref="CDD:180233"
misc_feature complement(442419..442898)
/locus_tag="MA5_01790"
/note="3-Deoxy-D-manno-octulosonic-acid transferase
(kdotransferase); Region: Glycos_transf_N; pfam04413"
/db_xref="CDD:203003"
gene complement(443168..443824)
/locus_tag="MA5_01795"
/db_xref="GeneID:12007239"
CDS complement(443168..443824)
/locus_tag="MA5_01795"
/note="COG2121 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404617.1"
/db_xref="GI:383486937"
/db_xref="GeneID:12007239"
/translation="MRKALKKFLKNSKCLLSIITILLYWYLRFVYFTSRQKFIFYDNR
NKEKFLNEQGVIFAFWHNMLALSPAMFTGHRNVYALISPHLDGKILNALVGKFGCQVI
VGSTNKNSIVALRNIIGKLSQGANIIVTPDGPKGPVYKVNSGITEIAYRYNKKLIPIV
SSTSRCFRLKSWDKLIIPIPFGTIKIIVGSPLALVADKVKNHLNLEKQLKSLTESLKK
"
misc_feature complement(443198..443746)
/locus_tag="MA5_01795"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: DUF374; Region:
LPLAT_DUF374-like; cd07983"
/db_xref="CDD:153245"
misc_feature complement(order(443420..443428,443573..443584,
443627..443629,443633..443635,443642..443644))
/locus_tag="MA5_01795"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153245"
gene complement(443949..445148)
/locus_tag="MA5_01800"
/db_xref="GeneID:12007240"
CDS complement(443949..445148)
/locus_tag="MA5_01800"
/EC_number="2.6.1.1"
/note="COG0436 Aspartate/tyrosine/aromatic
aminotransferase"
/codon_start=1
/transl_table=11
/product="aspartate aminotransferase"
/protein_id="YP_005404618.1"
/db_xref="GI:383486938"
/db_xref="GeneID:12007240"
/translation="MSIISTRLNSIKPSPTLAVVKKTLELKKAGVNIIALGAGEPDFD
TPDNIKEVAITSIKDGFTKYTNVDGIPLLKQAIKNKFKRENNIDYELDEIIVSTGGKQ
VIYNLFMASLDKGDEVIIPVPYWVSYPDMVALSTGTPVFVNCGIENNFKLSVEALEHS
ITDKTKWLIINSPSNPTGAGYNCKELENIAKTLRKYPNVNIMSDDIYEHITFDDFKFY
TLAQIAPDLKERIFTVNGVSKAYSMTGWRIGYGAGSKALIKAMTIIQSQSTSNPCSIS
QMAAIEALNGTQDYIKSNALNFQKKRDLALSILEEVTYFECYKPEGAFYLFVKCDKIF
GTKTKSGRIIANSNNFSEYLLEEAKVAVVPGITFGLDGYFRISYATSMQELEEACIRI
KHACNAL"
misc_feature complement(443952..445148)
/locus_tag="MA5_01800"
/note="aspartate aminotransferase; Provisional; Region:
PRK05764"
/db_xref="CDD:180244"
misc_feature complement(443970..445049)
/locus_tag="MA5_01800"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature complement(order(444408..444410,444432..444437,
444441..444443,444528..444530,444624..444626,
444774..444776,444846..444854))
/locus_tag="MA5_01800"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature complement(order(444312..444314,444321..444323,
444408..444416,444549..444551,444744..444746,
444843..444845))
/locus_tag="MA5_01800"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature complement(444432..444434)
/locus_tag="MA5_01800"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene 445362..446366
/locus_tag="MA5_01805"
/db_xref="GeneID:12007241"
CDS 445362..446366
/locus_tag="MA5_01805"
/note="COG0457 FOG: TPR repeat"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404619.1"
/db_xref="GI:383486939"
/db_xref="GeneID:12007241"
/translation="MLGKIKYIIKHYYLTIINIPHFIKNQILEFRNYINDCKYKFSHL
AETNYQLGFDHLYKGNLNDALLRFKLVNKFFNSNDSKVYYQLGLIYYLKNNYRQATVY
LEKSNEKYKTIFINFLKNYQFITEIPQEIWAQYRDLIAQYYPTIFNNEKNIHLPYRFV
NETLKHISDLSDNYSILELGSNIGLVGYEVQKRFPESFTLTGVEISSFMNEIQATFYQ
NTKIYNHIYNIAIDEFLKQNSNKFDIILSFCGLSFTNNLIKYFNLIYSCIKKQGYFAL
CLPNSVKTQFSAKRKEFIFNLNEVNNFLQKNNFTILTSDEIILAENNKYSIIVCKKIT
"
misc_feature 445830..446297
/locus_tag="MA5_01805"
/note="Methyltransferase domain; Region: Methyltransf_23;
pfam13489"
/db_xref="CDD:222171"
misc_feature 445875..446198
/locus_tag="MA5_01805"
/note="Methyltransferase domain; Region: Methyltransf_18;
pfam12847"
/db_xref="CDD:221804"
gene 446371..447126
/locus_tag="MA5_01810"
/db_xref="GeneID:12007242"
CDS 446371..447126
/locus_tag="MA5_01810"
/note="COG2853 Surface lipoprotein"
/codon_start=1
/transl_table=11
/product="VacJ lipoprotein"
/protein_id="YP_005404620.1"
/db_xref="GI:383486940"
/db_xref="GeneID:12007242"
/translation="MKILIILSIILCSLFGRADLEYVDNDIYTYNGGRNENGCLEVYD
PYEKFNRKVFAFNSVLDYIIFRPLAVGYKNITNDYIKARVNSFISNVYTPLTVVNYGL
QLNYDKTMKSVWRFLINTTLGIGGLFDVASKLGLQSDRQTFGSTLAHYGVAPGPYLVL
PIIGSTNARDMTDSVITNYAINPLMYYTHNDFDLWILAVSKITDRYIVLPFSDYVMKN
STDPYVAIRSALHRAREASVQYPENFKCPKPKN"
misc_feature 446482..447087
/locus_tag="MA5_01810"
/note="VacJ like lipoprotein; Region: VacJ; pfam04333"
/db_xref="CDD:113116"
gene 447146..447745
/locus_tag="MA5_01815"
/db_xref="GeneID:12007243"
CDS 447146..447745
/locus_tag="MA5_01815"
/note="COG2854 ABC-type transport system involved in
resistance to organic solvents, auxiliary component"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404621.1"
/db_xref="GI:383486941"
/db_xref="GeneID:12007243"
/translation="MQKIITGLFLLAITFSSYSTEKVPSGLHDYVTNLVKDASSILND
SKLSERVKISKARELMSQNLDFEWMAKYTLGRNGIKTLSGLQIQEFIKVYSKYVTKSY
TDLIKDYKGEHPKIVGVRPLSSTDFLVAMNIISNKEQDPIKVEYLVREMKGNGKDFFK
ISDIITEGISLIGAQQDEFTETLKNQGFEVLIQKLENHS"
misc_feature 447146..447742
/locus_tag="MA5_01815"
/note="ABC-type transport system involved in resistance to
organic solvents, auxiliary component [Secondary
metabolites biosynthesis, transport, and catabolism];
Region: Ttg2D; COG2854"
/db_xref="CDD:225410"
gene 448528..449742
/gene="alr"
/locus_tag="MA5_01820"
/db_xref="GeneID:12007244"
CDS 448528..449742
/gene="alr"
/locus_tag="MA5_01820"
/EC_number="5.1.1.1"
/note="COG0787 Alanine racemase"
/codon_start=1
/transl_table=11
/product="alanine racemase"
/protein_id="YP_005404622.1"
/db_xref="GI:383486942"
/db_xref="GeneID:12007244"
/translation="MSLCTLEINLSAIKNNYRLLQDICKTALVGAVVKANGYGLGAMQ
IAKALIKENCQYFFVATSEEGINLRKVLNNDITILVLNGVFTHDALELIQYNLTPVLN
NLSQIEIWQKFSNLKGKILPCYLHFNTGLNRFGLNSDEIEQLINDRDLLKGLDLQYII
SHLAASEETGNPYNLIQLNRFKVYLEYFPNVKASFANSGGIFLGQDYHFDLARPGAAL
YGLNSLIEVSSNLSYTEEFESNTAALTTTACINKCSDVSVRLTPKLPLKGSYTVRLQN
PVTLKAPIIDLQNLTLDSHIGYNMTFTTKRDSVIATLPLGYADGFSRNFSSQGEVFIN
SCSVPIVGRVSMDLINIDVTDLPPSEVFLGQEAEIIGNYCTPDKIASIIGTIGYEVLT
SLGSRYKRKYIS"
misc_feature 448528..449736
/gene="alr"
/locus_tag="MA5_01820"
/note="alanine racemase; Reviewed; Region: alr; PRK00053"
/db_xref="CDD:178827"
misc_feature 448537..449736
/gene="alr"
/locus_tag="MA5_01820"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme Alanine Racemase; Region: PLPDE_III_AR; cd00430"
/db_xref="CDD:143481"
misc_feature order(448621..448623,448627..448629,448639..448641,
448768..448770,448903..448905,448924..448926,
449011..449013,449116..449121,449164..449175,
449419..449421,449476..449478,449560..449565,
449689..449691)
/gene="alr"
/locus_tag="MA5_01820"
/note="active site"
/db_xref="CDD:143481"
misc_feature order(448621..448623,448627..448629,448639..448641,
448768..448770,448924..448926,449011..449013,
449116..449121,449164..449175,449689..449691)
/gene="alr"
/locus_tag="MA5_01820"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143481"
misc_feature order(448627..448632,448705..448707,448714..448719,
448831..448836,448918..448929,449011..449013,
449017..449019,449380..449391,449395..449397,
449407..449412,449416..449424,449461..449463,
449476..449478,449494..449496,449566..449571,
449677..449682,449689..449694,449716..449718)
/gene="alr"
/locus_tag="MA5_01820"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143481"
misc_feature order(448627..448629,448639..448641,448924..448926,
449011..449013,449419..449421,449476..449478,
449560..449565,449689..449691)
/gene="alr"
/locus_tag="MA5_01820"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143481"
misc_feature order(448627..448629,449419..449421)
/gene="alr"
/locus_tag="MA5_01820"
/note="catalytic residues [active]"
/db_xref="CDD:143481"
gene 449894..450673
/locus_tag="MA5_01825"
/db_xref="GeneID:12007245"
CDS 449894..450673
/locus_tag="MA5_01825"
/note="COG0767 ABC-type transport system involved in
resistance to organic solvents, permease component"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="YP_005404623.1"
/db_xref="GI:383486943"
/db_xref="GeneID:12007245"
/translation="MLLKIAHLVGKHTIKFAQSVGIFSLFSFIAISSIIKPPLYLSLI
IRQLLFIGFHSLPVVAMTTFFSGAVLALQSYTGFSRFSAENSIATVVVLSLTRELGPV
LAGLIVAGRVGASIAAEIATMRVTEQVDALYTLSTDPIKYLVCPRVIAAIITMPCLVL
IGDIIGVMGGYLVGIYKLDFNSTAYLTSTFQYLELIDVISGLIKATVFGFIISIISCY
SGYYSGKGAKGVGRATTSAVVNSSILILISNYLITELFFKV"
misc_feature 450020..450610
/locus_tag="MA5_01825"
/note="Permease; Region: Permease; pfam02405"
/db_xref="CDD:145511"
gene 450676..451434
/locus_tag="MA5_01830"
/db_xref="GeneID:12007246"
CDS 450676..451434
/locus_tag="MA5_01830"
/note="COG1127 ABC-type transport system involved in
resistance to organic solvents, ATPase component"
/codon_start=1
/transl_table=11
/product="ribonucleotide ABC transporter ATP-binding
protein"
/protein_id="YP_005404624.1"
/db_xref="GI:383486944"
/db_xref="GeneID:12007246"
/translation="MSTKEEFKIKIRSLYKSFAHHKVLDGIDLDVKKGSSLVILGGSG
SGKSVLIKSIVGLIKPDKGQIFIDNLEIQDISNTHKFEIMKGVGFLFQGGALFDSLNV
RDNITFNTKKLSKKEKNDLAGAKLNSVGLSTRILDLYPPELSGGMQKRVALARAICST
PSILFLDEPTTGLDPIMANVINELIIKIQEELCATTITITHDMISTEKIAKEIAMIYH
GKIQWYGSKEEMRNSDNPYLTQFINGLTTGPIEV"
misc_feature 450676..451431
/locus_tag="MA5_01830"
/note="ABC-type transport system involved in resistance to
organic solvents, ATPase component [Secondary metabolites
biosynthesis, transport, and catabolism]; Region: Ttg2A;
COG1127"
/db_xref="CDD:31324"
misc_feature 450700..451398
/locus_tag="MA5_01830"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 450796..450819
/locus_tag="MA5_01830"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(450805..450810,450814..450822,450949..450951,
451174..451179,451276..451278)
/locus_tag="MA5_01830"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 450940..450951
/locus_tag="MA5_01830"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature 451102..451131
/locus_tag="MA5_01830"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 451162..451179
/locus_tag="MA5_01830"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 451186..451197
/locus_tag="MA5_01830"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 451264..451284
/locus_tag="MA5_01830"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 451436..451687
/locus_tag="MA5_01835"
/db_xref="GeneID:12007247"
CDS 451436..451687
/locus_tag="MA5_01835"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404625.1"
/db_xref="GI:383486945"
/db_xref="GeneID:12007247"
/translation="MFKHVLLSIIIFLGINQNVYSINSNSYKTDDIIKIVIILGIVIL
IFSPAKFRIIVIGTILGLACAYFTYKYIIPIFIASLNAA"
gene 453370..453663
/gene="rpmB"
/locus_tag="MA5_01840"
/db_xref="GeneID:12007248"
CDS 453370..453663
/gene="rpmB"
/locus_tag="MA5_01840"
/note="COG0227 Ribosomal protein L28"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L28"
/protein_id="YP_005404626.1"
/db_xref="GI:383486946"
/db_xref="GeneID:12007248"
/translation="MSRKCELTGVGVLYGNNVSHSQRKTRRRFEPNLRSIKFRSDITD
EVYRLSVNARCIRSVEKAGGFDAYILKANDDILSSAARAIKQKIIHIKAAKSL"
misc_feature 453370..453588
/gene="rpmB"
/locus_tag="MA5_01840"
/note="Ribosomal protein L28 [Translation, ribosomal
structure and biogenesis]; Region: RpmB; COG0227"
/db_xref="CDD:223305"
gene 453660..453896
/locus_tag="MA5_01845"
/db_xref="GeneID:12007249"
CDS 453660..453896
/locus_tag="MA5_01845"
/note="COG0254 Ribosomal protein L31"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L31"
/protein_id="YP_005404627.1"
/db_xref="GI:383486947"
/db_xref="GeneID:12007249"
/translation="MKNGIHPEYKKLLIKVGSNIFETMSTHPIGEILMDVDFRKHPAW
NKDSGNVVNQSNKSVSDFNKRFAGLSFDSKKEAS"
misc_feature 453660..453893
/locus_tag="MA5_01845"
/note="50S ribosomal protein L31; Provisional; Region:
PRK01397"
/db_xref="CDD:179294"
gene 454016..454092
/locus_tag="MA5_t04335"
/db_xref="GeneID:12007250"
tRNA 454016..454092
/locus_tag="MA5_t04335"
/product="tRNA-Met"
/db_xref="GeneID:12007250"
gene 454389..455033
/gene="engB"
/locus_tag="MA5_01850"
/db_xref="GeneID:12007251"
CDS 454389..455033
/gene="engB"
/locus_tag="MA5_01850"
/note="COG0218 Predicted GTPase"
/codon_start=1
/transl_table=11
/product="GTP-binding protein YsxC"
/protein_id="YP_005404628.1"
/db_xref="GI:383486948"
/db_xref="GeneID:12007251"
/translation="MINNGKALNNKKSIDYSKLFRHQAKFVAGAIHINQIPDFSLPEI
VFVGKSNVGKSSIINTICNNKSLAKVSNTPGRTRQINFFNIVDKLIIVDLPGYGFANV
PISVKEQWEGLITYYLRNSHNLMLVNLLIDSRRGIKENDKKVAELLLANKREFQIIFT
KSDKVTDRENLNYEAQNFLATLNYLCNVIYVSSRNKEGMRELKASFAQCIKHQR"
misc_feature 454515..455018
/gene="engB"
/locus_tag="MA5_01850"
/note="YihA (EngB) GTPase family; Region: YihA_EngB;
cd01876"
/db_xref="CDD:206665"
misc_feature 454530..454553
/gene="engB"
/locus_tag="MA5_01850"
/note="G1 box; other site"
/db_xref="CDD:206665"
misc_feature order(454536..454556,454596..454604,454611..454619,
454665..454667,454869..454871,454875..454877,
454962..454967)
/gene="engB"
/locus_tag="MA5_01850"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206665"
misc_feature 454608..454628
/gene="engB"
/locus_tag="MA5_01850"
/note="Switch I region; other site"
/db_xref="CDD:206665"
misc_feature 454617..454619
/gene="engB"
/locus_tag="MA5_01850"
/note="G2 box; other site"
/db_xref="CDD:206665"
misc_feature 454665..454676
/gene="engB"
/locus_tag="MA5_01850"
/note="G3 box; other site"
/db_xref="CDD:206665"
misc_feature order(454674..454685,454704..454748,454755..454760)
/gene="engB"
/locus_tag="MA5_01850"
/note="Switch II region; other site"
/db_xref="CDD:206665"
misc_feature 454866..454877
/gene="engB"
/locus_tag="MA5_01850"
/note="G4 box; other site"
/db_xref="CDD:206665"
misc_feature 454962..454970
/gene="engB"
/locus_tag="MA5_01850"
/note="G5 box; other site"
/db_xref="CDD:206665"
gene 455620..455907
/locus_tag="MA5_01855"
/db_xref="GeneID:12007252"
CDS 455620..455907
/locus_tag="MA5_01855"
/note="COG3702 Type IV secretory pathway, VirB3
components"
/codon_start=1
/transl_table=11
/product="type IV secretion system protein VirB3"
/protein_id="YP_005404629.1"
/db_xref="GI:383486949"
/db_xref="GeneID:12007252"
/translation="MSGTLASDLLFVGLTRPTMIFGVSIKFAVLNMIMTMIVFIWNNG
IMILFIAGALHLVAYIICFKEPRFIELYLNKMSRTSQCPNKFYYGANSYNI"
misc_feature 455620..455904
/locus_tag="MA5_01855"
/note="type IV secretion system protein VirB3;
Provisional; Region: PRK13899"
/db_xref="CDD:139959"
gene 456092..458509
/locus_tag="MA5_01860"
/db_xref="GeneID:12007253"
CDS 456092..458509
/locus_tag="MA5_01860"
/note="COG3451 Type IV secretory pathway, VirB4
components"
/codon_start=1
/transl_table=11
/product="type IV secretion system ATPase VirB4"
/protein_id="YP_005404630.1"
/db_xref="GI:383486950"
/db_xref="GeneID:12007253"
/translation="MKLFRTRAAKELRSKQERPTSHFIPYKCHWDSNTILTKDNSLLQ
VIKINGFSFETADDEDLDIKKNIRNALLKNMASGNIVMYFHTIRRRKAVIFDDTEFTY
DPTVKVPNDFITYLGAEWRKKHAGARSFFNELYISILYKPDTGGAAIVEYFLKKLRQK
SNKTAWENDMKEMKENLQEMSTRVVNTFRSYGAKLLGVRQTQSGIYCEILEFLSSLIN
CGDSPGPIALPRGTIDEYLPTHRLFFDSRTIEVRSPLGKKYAGIISILEYGPNTSAGI
FDGFLQMPFEFVMTQSFVFANRTVAIGKMKLQQNRMIQSGDKATSQIAEINTALDMAT
SGDIGFGDHHLSLLCSAKNIKALEDILSMAAVELSNSGIQPVREKVNMEPSYWGQLPG
NMDYIVRKSTINTLNMASFASQHNYPLGKIRDNHWGEYVTVLDTTSGTPFYFNFHVRD
VGHTLIIGPTGAGKTVLMNFLCAEAQKFKPRMFFFDKDRGAEIFIRALNGVYTVIDPG
LKCNFNPLHLEDTSENRTFILEWLRVLVTSNGESLTAQDNKILSQAVNGNFRLEKKDR
RLSNVIAFLGIDTPNSLASRIAMWVGKGSHAKIFDNEIDDIDLQRARVFGFDMTELLK
DPVSLAPVLLYIFHRINISLDGQKTMIVLDEAWALIDNPVFAPKIKDWLKVLRKLNTF
VIFATQSVEDAAKSSISDTLIQQTATQIFLPNLKATDIYRSAFMLSQREYILIKTTDP
TTRYFLIKQGIDAVVAKVNLEGMNNIISVLSGRVETVMLLDQIRDKYGNDPDKWLPIF
YEAVKTL"
misc_feature 456092..458506
/locus_tag="MA5_01860"
/note="type IV secretion system ATPase VirB4; Provisional;
Region: PRK13898"
/db_xref="CDD:172418"
misc_feature <456515..456673
/locus_tag="MA5_01860"
/note="Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the...; Region: AAT_I;
cl00321"
/db_xref="CDD:241782"
misc_feature 456671..457288
/locus_tag="MA5_01860"
/note="CagE, TrbE, VirB family, component of type IV
transporter system; Region: CagE_TrbE_VirB; pfam03135"
/db_xref="CDD:217382"
misc_feature 457421..>457576
/locus_tag="MA5_01860"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature 457463..457486
/locus_tag="MA5_01860"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature order(457472..457477,457481..457489)
/locus_tag="MA5_01860"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
gene 458627..462091
/locus_tag="MA5_01865"
/db_xref="GeneID:12007254"
CDS 458627..462091
/locus_tag="MA5_01865"
/note="COG3704 Type IV secretory pathway, VirB6
components"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404631.1"
/db_xref="GI:383486951"
/db_xref="GeneID:12007254"
/translation="MALFPRSILIALVLSFVLNLGLVTKIHAKDTLDSIIDILSGLTC
ETQGVGDLMRTEFSHTCIVAPFFTFAVMNLVSPVLYMNTFLKLKINDSDLFNDSDFGN
FPGGQCTRANRIDPKNPELRFALCNNAKLIVSRAKSIAESALAIAKAVLTWSDPWDDI
KQAWENKKKEYHIPYRGKPGDDGFAFDVGFPVIYWKVIQDRDRICVSTKGFTGDVPVG
CKYMKEPFPKSIYNSFIDVEDKNFIKDPTNDTPRDPLALVSCSAAGEGCYQKAYNASK
TAVVMTSPLIECIKQMIARLLISKDVCSFDNVDQVVNLSSRQDSALFQFQVGMYKIVT
AFLTLYVMFFGFKLLLAGKVPPKSEYINFILKIIFVTYFSIGININPANGSQYDRLDG
MIQWAFPFLLNGINGLASWVMNAAPSGLCKFNNIHYDGSVSYIALWDALDCRVAHYLG
LDILSTLLVENTYRSHDFLNFDFFSFSAPPYIYLLIPAIISGNMMLVSLALSYPLLVI
SVAAFMVNATIMCMISIVILGILAPLFVPMFLFAYTRNYFDSWVKLMISFLLQPMVVV
TFMITMFAVYDYGFYGKCQYKSKLIHNSIEDKIQGGLKSKRDVLIFYINNDWDDTSQY
PDKDSVESCKNSLGYMLNNPINMAFNFAKDNISEIVNSKPGETTTDEFLSKFQFLSGV
VLGPGMFFMSPKVLFEKIKNILLALVTACFTLYLMYNFSSQLAEFAADMTEGVALNNV
AIKPQAIFKAAMAALSTAGTATKGIDQMASRGGGARDLGGAKGFVSDNTASSGSAVGD
NIAVSRGASTPTVTTTTDSSSITNSITKTVSSDVRSDIVTPHSSVSSDVRSDIVTPHS
SVSSDVRSDIVTPHSPTTAFSQHSSISSTIPTSVHNIKPTSIKEIVSNNRESKKEINN
TMRSQEKIKSASKALGLIDYSFNLKEHDNPIGVKQIRENAEIRDKRVEVEKAWNELVA
SGRGRIRDQQSEATSERRTNAEKKWKELVDSGVVTEIRERDNSVTNQFDKLADELDKS
KKSKVEENKNITKDIKVDNTNTLPQEKVDNTNRRSGLIDYSFNLKEHDNPIGVKQIRE
NAEIRDKRVKVEKAWNELVASGGGRVQEQAGVKITERRANAEKVWDELVKSGVVTEKR
DNSSNENS"
misc_feature 459479..460936
/locus_tag="MA5_01865"
/note="Type IV secretory pathway, VirB6 components
[Intracellular trafficking and secretion]; Region: VirB6;
COG3704"
/db_xref="CDD:33499"
gene 462078..464096
/locus_tag="MA5_01870"
/db_xref="GeneID:12007255"
CDS 462078..464096
/locus_tag="MA5_01870"
/note="COG3704 Type IV secretory pathway, VirB6
components"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404632.1"
/db_xref="GI:383486952"
/db_xref="GeneID:12007255"
/translation="MKTLKVLKIFIIVYISSVSLESFAGFGESCSNLPITSDGYLETY
TAYGYIIRSIDMKDPRGNCNPSTSSITFCFKNVEGSASPCTIYTLNEGDTRKISDLST
DNNPDLGANTVLKNIVLTVKKFGNDLCLAMPTSRGPMPVACKSLSVTPTATKPKDENC
NIGKSCYTGANYSQSLINFSGLAVQCLSETLNKIFFTGSSCSAQDQNSRITHLASFAT
FQGYLKRIIGAALILYTMFFAFNMALNKEYATTEKITLFIIKFLFVVYFSIGLGPLDF
SGGQPVKENGMLKYGLPLLTGAAPDFAGMIFNAAGSRGLCQFDNTKYKDGYKFYGLWD
AIDCRIGYYLGLDLLYNIDKNGILGRPVSNGTSGNNKPIPNFDPDGKKDRPHDLSKAG
ALRFFTVMFGFFMSGHVIILVAGMVFSVIFLSILLYFITHYLVCMVTIYVMTYISPIF
IPMVLFTRTKAYFDGWLKVCISCALQPAVVAGFIALLITMYDSAIFKNCEFLRYDYEK
GDIRFSTFELRLPSIDADKCQESFGYKMLKYYAGEGWEEHLLILFPIKSIVRDVVSIL
AELLCVLIFSVIFYYFSKSIGRFAADLTNGPNMDAVTASPTKIVDLVKKGAAFLKDAS
VHEHGKSSLGDKPDIGNKRKDGAQQGEDAVNSSGGEVADLASGSGGGK"
misc_feature 462624..464024
/locus_tag="MA5_01870"
/note="Type IV secretory pathway, VirB6 components
[Intracellular trafficking and secretion]; Region: VirB6;
COG3704"
/db_xref="CDD:33499"
gene 464103..467018
/locus_tag="MA5_01875"
/db_xref="GeneID:12007256"
CDS 464103..467018
/locus_tag="MA5_01875"
/note="COG3704 Type IV secretory pathway, VirB6
components"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404633.1"
/db_xref="GI:383486953"
/db_xref="GeneID:12007256"
/translation="MQSNLLKVLGVLAIVATLVCFIFAALGMIGAVRVGNGCYMRYSK
DGNGSTDSITSTITLNANANYVNISKMLPDGTTKLIPDPNRYGEWLNTQVLVEKNQSV
NLQVVGQVSLCLAYLPKNNLQFTERTRPGKSNLDDSGQMIPIPRVQDANSPPISLIMD
AKNNEWRNIAELYANDKVLVSVSPNFANTDATVDDVFKGVKVTKDCTQGKTSYYPICG
KYSIYSGKYVTACELKQNYWKSNVHREECYCILGCIDKEDNDPLVCDIANAISHCCTS
LVCDSLPAWINHYSNMPEAYKDDGSFTFSWSDKSRNLLIEYEDLQCSNNVNIPPNGQC
PDIVNNRSPKDKNYIGGVSCTSGICKDGDFQKNRKFWYTADGKGGKGPTGLIYQMNDI
GSVSQALPSKLEFAKFVPETEQPPEYKDKNGKYLYKVIYNIPFNSNIEKSYLQYRLWS
PTSQDASKNTGGYVLNIKQTKCYRENGNSFKDIFDDRGRVQYIIVKSSENPNTSGKTY
SPQGINVDSDGKSHFNANESGYIWMKILNDPSNNLKDYKDSEGSYKVHFSTSLKVGSF
TIKVMNPLLQLFKTKVQDAATSIFKNMVCYKATDNSSCTNFFTYIKAILILYVMTYGA
MFLLGFAKINQKELVIRIAKIGVVSGLINGNTFEFFNNYLFDAITNFSDSIIANMSGY
SLFTSTNTISNPFMFLDAIMSKIFFSQTFIAQLLSLLSLGLSGIIYFIITFIAICIVI
ITTLRAIAVYIMAFMATCILIGIAPLFISFLLFDFTRYLFDNWVRFTIRYMIEPVVMM
AGIIVLTQLFTIYLDFVLGYSVCWKCTLPIKIPFIGTILPIALLNVPIFCINWFAPWG
MDYMSGMMGVNMQNIVALVIIAYGMYGYVEFSGRMVAKLTSAAGPSATQIGGRMSHDA
GQKVLSQIGMDYRTRQGITGRAKSRLEQRNRTLEHAEQNSKKYKKRIGENTNEETLK"
misc_feature 465486..466949
/locus_tag="MA5_01875"
/note="Type IV secretory pathway, VirB6 components
[Intracellular trafficking and secretion]; Region: VirB6;
COG3704"
/db_xref="CDD:33499"
gene 467180..469846
/locus_tag="MA5_01880"
/db_xref="GeneID:12007257"
CDS 467180..469846
/locus_tag="MA5_01880"
/note="COG3704 Type IV secretory pathway, VirB6
components"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404634.1"
/db_xref="GI:383486954"
/db_xref="GeneID:12007257"
/translation="MKILKSLVLLVLFIVMPAKAHDAFSWMSTSFSGLKGLFGCLEVP
EFTSFQESNIGINLSKAGAWQSTGHTVEKGKLLKINWSIAGVTTEPRKYLVLYRIDPR
FSTPQVFIKTYNYSKLQFEALGFPRFVTNSNSSIPGAIPPDKDLDALSFTKMSDSIKY
FNYSKNNVKIEVKAGDVVNISLVGKDNFFTSNTLDNILTEELDSSIFAPSALYTQSNL
GNFDNRIIYASAKEVCDIIDAARDPDKPSGCSGTGAATKYKSINSNEALVGKPMMIGA
IHNFMGLINSCPEHSGINTRPACYYDQGRGMIIKVGGQVIKERDQSFVKSGRNSFIYY
QATRDGIMNFTSDWQVSNMFNNSVLMSDWIRRFLNYPSFIDYINQNDWSANFLYFGRY
SMIVEIGNGANSISADVQQNISLEYLITYDGTLPDPSIRGTPVDYNFAADAPKDGYLW
LRVVNPNSNIQGVVSVNYANYTGTTWFSDIVYNGAIKPITDQFRTFSKNFYIKLIKNS
AVQNIVKAALTLYVIIFGLMFVAGALKLTAIEVITRICKIAIVAFLIREESWNFFNTY
FFSVFTDGIDFFITNVVGATSSRSNIFGFIDPIFDKYTNGRIWGLLFIELLQIHNGLA
FIAIITIYSLITYFRAILEVIIGYVIAFIGITVMISLAPFFIILMLFEKTKSLFDNWI
STLLSYVVQPTILLIFFLLIDQVLSEQLLKVVVRACWDTLIPIKIGLDLTNLGIPINF
SFTLPFLPGIPFYVPDVPEISRSNIFTNNANTFLVLFTTSLLFYSYCLMSYGLVTFVN
IVVGMLTNVTPARISGNYQARSDPVGAVMQDIGSVTTPMKNASMVPARVFKDKIIDQN
YKARKSEGGVEFTNKFFSERNDITKKEEGARE"
misc_feature 468329..469762
/locus_tag="MA5_01880"
/note="Type IV secretory pathway, VirB6 components
[Intracellular trafficking and secretion]; Region: VirB6;
COG3704"
/db_xref="CDD:33499"
gene 469973..473440
/locus_tag="MA5_01885"
/db_xref="GeneID:12007258"
CDS 469973..473440
/locus_tag="MA5_01885"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404635.1"
/db_xref="GI:383486955"
/db_xref="GeneID:12007258"
/translation="MKKNIFITSLLILLLLLSSCTGDTCIDPDDFGFITFNVSSRYNP
GEITSRHEGDQVTPWRDSAYKVNGYPLTIMVRPWNYILGDKNTSGQLSAWCPWYGQKN
NTTTLAPFCVKLQPCTFWDNARFDMCTPNPENRNDAMISNPPCIMTDGVGLYFLIAAK
NTDPNISPDSQRRPQGITKHLGELTSSVGYEFYSISSTGQFLKAGGINYQYNGEDKSK
YAQSPLYFKIIDKFYDDNSGQYRLVIKSGVSDTRPDPLQFLTDLIKKVLFGKDGIIKK
TYQQIIDTPGYKISVSAILTLYIMFTVLSFLIGNINLTHVELIIRIFKISIISILLST
DKAWTFFHDYLFVFFIDGVQQILQIINEAAATGPGSQSLLGLLISTQTLSKLFSLLFV
DWLGFIYIILYLIALYFIFFLIFKATIIYLTALITIGMIIIMGPIFICFMLFNITRSL
FENWLRQLISYALQPIILFAGIAFISMIIRTEIYSTLGFGVCKHDFPNLGPINEIFGS
FLEDIDPSLGNSIFYWWFPVPMKGGINNFHKAKILVPNDHIVVDASCKNDHDKCKHCA
AYECIDERYIELPFLDLVKDSTRINNFINGKFVQLDGILLIFVSIYLLSKFNDTAVST
AQFIAGTSGNLTDIQKVNQQSYESLSQQINRPLNYVAQAVSAPVTSRISAGTEQASMF
FAEKFENMMMERLEKQALSSSANKAVQNEVKRKYGIDSKDVKMNAIKDYEDGISGLLK
NLPKRNELKVKELSQMKFIQLRDKISANKYDVQDYAALSKEQKTELDKLLKDANLRAL
ASEANFTKDYQEAYKQAHQEMSGRGIGLFGKNIGVLRSWQEMEHRVNVKRKLKEEKRI
GIGEKIYAGYTGIKRAALTKIVGKDLRDAYEGNLTSAEWHDFEYNDPRLRTYSEKLKD
DEKAREYEELRMHINKETIAVQADILSPEYLVKLEKAGRQSDVEYYQGLAQKQLIHDV
HSRLFEEGEPVMMGDRFMREKATDSQMRDMIDNAHKKYAELIDVDRYTRRQEYYDIIH
EKAKENLEQTYKELKDHFKSDNISIEEMPSLIAQKVKDTNTGSEIDKKITEEINNFNT
DVKNYEYSTAVLNKIEDRKQAIMNEVNAQIDKINKYRASAKMEQYVKPILNEGRKLRT
LEDHLKNMT"
misc_feature 470426..471700
/locus_tag="MA5_01885"
/note="Type IV secretory pathway, VirB6 components
[Intracellular trafficking and secretion]; Region: VirB6;
COG3704"
/db_xref="CDD:226227"
gene 473877..474932
/locus_tag="MA5_01890"
/db_xref="GeneID:12007259"
CDS 473877..474932
/locus_tag="MA5_01890"
/EC_number="2.3.1.8"
/note="COG0280 Phosphotransacetylase"
/codon_start=1
/transl_table=11
/product="phosphate acetyltransferase"
/protein_id="YP_005404636.1"
/db_xref="GI:383486956"
/db_xref="GeneID:12007259"
/translation="MKKQHIINETFLDEILAQKLGTTYIPPTEIKDSDFDKAAKHFIN
LLLRADGLKPIKTAVVHPIDKESLLGAVRAAQFNVIKPILIGPQHKIESVAKVNDVDL
ENYQVINAEHSHEAAKKAVELAKKREVAAIMKGALHTDELMSAVVYKENGLRTERRIS
HAFLMAVATFPKPFIITDAAINIRPTLEDKRDIVQNAIDLMHIIKEDKQVRVAVLSAV
ETVTSAIPTTLDAAALSKMADRGQITNAVVDGPLAFDNAISLFAAEAKGISSPVSGNA
DILVVPDLESGNMLAKQLKYLGQAVMAGIVLGARVPIILTSRADPIDMRVISCVLASF
IYNQTKAKLHNSSKSII"
misc_feature 473973..474908
/locus_tag="MA5_01890"
/note="phosphate acetyltransferase; Provisional; Region:
PRK11890"
/db_xref="CDD:183361"
misc_feature <473997..474908
/locus_tag="MA5_01890"
/note="bifunctional enoyl-CoA hydratase/phosphate
acetyltransferase; Validated; Region: PRK08190"
/db_xref="CDD:236180"
gene 474929..476086
/locus_tag="MA5_01895"
/db_xref="GeneID:12007260"
CDS 474929..476086
/locus_tag="MA5_01895"
/note="COG0282 Acetate kinase"
/codon_start=1
/transl_table=11
/product="acetate kinase"
/protein_id="YP_005404637.1"
/db_xref="GI:383486957"
/db_xref="GeneID:12007260"
/translation="MKDVILIANAGSSSLKISIFAIQNKRVNDKIYNIFLEKNNNKIL
FYINQQKESTTSIKDDPIEMMINLFEEWWKKQSALNLIATGHRIVHGGKNFNKPVVVN
KKVIKELRVLIPLSPLHQPYNLQVLDLFFQKYKAISHIICFDTSFHCTNSPITKAFGL
PKQYYDKGIMRYGFHGLSYQYVSSHFKEITMEDLPPKAIIAHLGSGSSLCAIKNGLSL
TSSMGFSVLDGVMMATRPGNLDPGVVLYLINNEKMTINEITELLYKKSGLLGMSGESS
DMRTLIASNSHDSKFAVDLFVYRIVLEIGKLIAALEGIDCLIFTAGVGQNSPVIREMI
SKKLSWLGIKIDYEKNQKNEHRISTKGSKIKVFVVPTNEELIIAEEVMKFL"
misc_feature 474935..476083
/locus_tag="MA5_01895"
/note="Acetate kinase [Energy production and conversion];
Region: ackA; COG0282"
/db_xref="CDD:223359"
misc_feature 474938..476062
/locus_tag="MA5_01895"
/note="propionate/acetate kinase; Provisional; Region:
PRK12379"
/db_xref="CDD:183484"
gene 476478..477182
/gene="trmD"
/locus_tag="MA5_01900"
/db_xref="GeneID:12007261"
CDS 476478..477182
/gene="trmD"
/locus_tag="MA5_01900"
/note="COG0336 tRNA-(guanine-N1)-methyltransferase"
/codon_start=1
/transl_table=11
/product="tRNA (guanine-N(1)-)-methyltransferase"
/protein_id="YP_005404638.1"
/db_xref="GI:383486958"
/db_xref="GeneID:12007261"
/translation="MSILHVTILTVFPEMFPGTLGYSLAGQALHNNIWSYNIINIRDF
GLTKHKNVDDKAYGGGDGLIMRPDVLGNAIENALSLNHNAKIYYPSPRGCVFTQSFAK
EMLKNKNLIFLCGRYEGIDERVIAEYNVTEVSVGDYILSGGEIPTLTILDCLIRLLPG
VLINQNTLSSESFEKDGEFQGGLECDLYTRPKIWRGRAVPSILLSGNHRLINNWRKEQ
SHMITKLRRPELLKDL"
misc_feature 476487..477179
/gene="trmD"
/locus_tag="MA5_01900"
/note="tRNA (guanine-N(1)-)-methyltransferase; Reviewed;
Region: trmD; PRK00026"
/db_xref="CDD:178803"
gene 477199..477615
/gene="rplS"
/locus_tag="MA5_01905"
/db_xref="GeneID:12007262"
CDS 477199..477615
/gene="rplS"
/locus_tag="MA5_01905"
/note="COG0335 Ribosomal protein L19"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L19"
/protein_id="YP_005404639.1"
/db_xref="GI:383486959"
/db_xref="GeneID:12007262"
/translation="MNIIDNFEQENIAKLTANKKIPDFEAGDTVKVTVKIIDKAIEKD
GKEKLTERFQAYEGVVIAKRNRGITSSFLVRKISHGEGVERRFMTYSPIVHSIDVVKY
GVVRRAKLYYLRHRNGKAARIREKLISRAKPKTAIS"
misc_feature 477199..477588
/gene="rplS"
/locus_tag="MA5_01905"
/note="50S ribosomal protein L19; Provisional; Region:
rplS; PRK05338"
/db_xref="CDD:235418"
gene complement(477832..478068)
/locus_tag="MA5_01910"
/db_xref="GeneID:12007263"
CDS complement(477832..478068)
/locus_tag="MA5_01910"
/note="COG3750 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404640.1"
/db_xref="GI:383486960"
/db_xref="GeneID:12007263"
/translation="MSAVVVKEQLEQYISKIERLEEEKSDLAQEVKDIFQDAASHGFD
VKAMKAILKLKKLDKNKLAEQDAMLELYRDTLGI"
misc_feature complement(477835..478068)
/locus_tag="MA5_01910"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3750"
/db_xref="CDD:226273"
gene 478140..479084
/gene="secF"
/locus_tag="MA5_01915"
/db_xref="GeneID:12007264"
CDS 478140..479084
/gene="secF"
/locus_tag="MA5_01915"
/note="COG0341 Preprotein translocase subunit SecF"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecF"
/protein_id="YP_005404641.1"
/db_xref="GI:383486961"
/db_xref="GeneID:12007264"
/translation="MQIYPLRFVPNKIDFDFMNFKKVSYSFSIILSLISLIWISIYKF
NFGIDFVGGIVIEVRLDQAPDLPKMRAVLSALEIGEVVLQNFGSERDLSIRFGSSSEE
NLMKNIDIIKTSLRNNFPYNFEYRKVDFVGPQVGRQLIEAGAMAMLFSFLAIMVYIGV
RFEWYFGFGILIALVHDVILALGFMSMTKLDFNLSTIAAVLTIIGYSVNDSVVIYDRI
RENLRKYHKKNITEIINLSINETLSRTILTVITTLLANLALILFGGKAIHSFSVLVFF
GIIAGTYSSIFISAPILTMFANRKFNKKVITQGKGYYN"
misc_feature 478173..479039
/gene="secF"
/locus_tag="MA5_01915"
/note="preprotein translocase subunit SecF; Reviewed;
Region: secF; PRK13022"
/db_xref="CDD:183847"
misc_feature <478269..478337
/gene="secF"
/locus_tag="MA5_01915"
/note="SecD/SecF GG Motif; Region: Sec_GG; pfam07549"
/db_xref="CDD:116168"
misc_feature 478467..479036
/gene="secF"
/locus_tag="MA5_01915"
/note="Protein export membrane protein; Region: SecD_SecF;
pfam02355"
/db_xref="CDD:111266"
gene 479235..480500
/locus_tag="MA5_01920"
/db_xref="GeneID:12007265"
CDS 479235..480500
/locus_tag="MA5_01920"
/EC_number="1.6.99.5"
/note="COG1894 NADH:ubiquinone oxidoreductase,
NADH-binding (51 kD) subunit"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase I subunit F"
/protein_id="YP_005404642.1"
/db_xref="GI:383486962"
/db_xref="GeneID:12007265"
/translation="MLTEEDKIFTNLYGQQSYDLKSSQKRGDWYNTKALIDKGRDFII
DEVKKSGLRGRGGAGFSTGMKWSFMPKNSEKPCYLVVNADESEPGTCKDRDILRFEPH
KLIEGCLIASFAIGANTCYIYIRGEFYNEASNMQRALDEAYKEGLIGKNACGSGFDCN
IYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVP
TILRRGASWFAAIGKPNNTGTKVFCISGHVNKPCNIEEVMGVPLKELIEKYAGGVRGG
WNNLKAIIPGGASVPLLPKSLCEVEMDFDSLRTVGSGLGTGGIIVMDKSTDIIYAIAR
LSKFYMHESCGQCTPCREGTGWMWRVMMRLVNGNAKKNEIDTLLNVTKEIEGHTICAL
GDAAAWPIQGLIRHFRDEIEQRIKSFGIA"
misc_feature 479235..480488
/locus_tag="MA5_01920"
/note="NADH dehydrogenase I subunit F; Provisional;
Region: PRK13596"
/db_xref="CDD:184170"
misc_feature 479955..480113
/locus_tag="MA5_01920"
/note="SLBB domain; Region: SLBB; pfam10531"
/db_xref="CDD:204505"
misc_feature 480225..480356
/locus_tag="MA5_01920"
/note="NADH-ubiquinone oxidoreductase-F iron-sulfur
binding region; Region: NADH_4Fe-4S; smart00928"
/db_xref="CDD:197996"
gene 480670..481464
/locus_tag="MA5_01925"
/db_xref="GeneID:12007266"
CDS 480670..481464
/locus_tag="MA5_01925"
/note="COG0681 Signal peptidase I"
/codon_start=1
/transl_table=11
/product="signal peptidase I"
/protein_id="YP_005404643.1"
/db_xref="GI:383486963"
/db_xref="GeneID:12007266"
/translation="MNRDNINSNKTVKQEFGSFAFVICIALVIRILIMEPFTVPTGSM
KATILENDYIFSTKYSYGYSNYSLSFFDFIHLFKGRVFAREPERGDIVVFRPPNDMSV
RYIKRLIGLPGDKIQLIDDVIYINDKKIERTEVGTYIGEDGIKYLKFKETLPNGRTYF
SYKLAPIFGVIPSDRYSNTDVFYVPEGQYFFLGDNRDRSNDSRVNLGFVPFENFIAKA
QFIWFSTKITWWDNDIGIINLILKLKPWIESVRLSRIFKNLYNVDE"
misc_feature 480715..481341
/locus_tag="MA5_01925"
/note="signal peptidase I, bacterial type; Region:
sigpep_I_bact; TIGR02227"
/db_xref="CDD:233790"
misc_feature 480772..>481002
/locus_tag="MA5_01925"
/note="The S26 Type I signal peptidase (SPase; LepB;
leader peptidase B; leader peptidase I; EC 3.4.21.89)
family members are essential membrane-bound serine
proteases that function to cleave the amino-terminal
signal peptide extension from proteins that are...;
Region: S26_SPase_I; cd06530"
/db_xref="CDD:119398"
misc_feature order(480796..480798,480985..480987)
/locus_tag="MA5_01925"
/note="Catalytic site [active]"
/db_xref="CDD:119398"
misc_feature <481234..481323
/locus_tag="MA5_01925"
/note="The S26 Type I signal peptidase (SPase; LepB;
leader peptidase B; leader peptidase I; EC 3.4.21.89)
family members are essential membrane-bound serine
proteases that function to cleave the amino-terminal
signal peptide extension from proteins that are...;
Region: S26_SPase_I; cd06530"
/db_xref="CDD:119398"
gene 481464..482141
/gene="rnc"
/locus_tag="MA5_01930"
/db_xref="GeneID:12007267"
CDS 481464..482141
/gene="rnc"
/locus_tag="MA5_01930"
/EC_number="3.1.26.3"
/note="COG0571 dsRNA-specific ribonuclease"
/codon_start=1
/transl_table=11
/product="ribonuclease III"
/protein_id="YP_005404644.1"
/db_xref="GI:383486964"
/db_xref="GeneID:12007267"
/translation="MESFEKLETLLGYSFKNKELLIEALSHPSLRQYHEYKYDKDYER
LEFLGDAVLNLLITEILFKNFENYKEGNLAKIRSYLVCKETICIVGTKLALKDYIIMT
HGEEVAGGRDNPNNIENATEALIAAIYLDSNIEITHNIIEKLWAEFMKVQNLTDYDPK
TALQEWAQANSHHLPIYRLIKREGAAHSSIFTVLVKVKDYEQTCTGYSIKEAEKKAAR
SLLHRLK"
misc_feature 481464..482138
/gene="rnc"
/locus_tag="MA5_01930"
/note="ribonuclease III; Reviewed; Region: rnc; PRK00102"
/db_xref="CDD:234633"
misc_feature 481518..481913
/gene="rnc"
/locus_tag="MA5_01930"
/note="RIBOc. Ribonuclease III C terminal domain. This
group consists of eukaryotic, bacterial and archeal
ribonuclease III (RNAse III) proteins. RNAse III is a
double stranded RNA-specific endonuclease. Prokaryotic
RNAse III is important in...; Region: RIBOc; cd00593"
/db_xref="CDD:238333"
misc_feature order(481590..481595,481602..481607,481614..481616,
481623..481628,481635..481640,481644..481652,
481680..481682,481848..481850,481875..481877)
/gene="rnc"
/locus_tag="MA5_01930"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238333"
misc_feature order(481590..481592,481599..481601,481611..481613,
481818..481820,481827..481829)
/gene="rnc"
/locus_tag="MA5_01930"
/note="active site"
/db_xref="CDD:238333"
misc_feature order(481599..481601,481818..481820,481827..481829)
/gene="rnc"
/locus_tag="MA5_01930"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238333"
misc_feature 481935..482135
/gene="rnc"
/locus_tag="MA5_01930"
/note="Double-stranded RNA binding motif. Binding is not
sequence specific but is highly specific for double
stranded RNA. Found in a variety of proteins including
dsRNA dependent protein kinase PKR, RNA helicases,
Drosophila staufen protein, E. coli RNase III; Region:
DSRM; cd00048"
/db_xref="CDD:238007"
misc_feature order(481935..481937,481953..481958,482082..482093,
482100..482102)
/gene="rnc"
/locus_tag="MA5_01930"
/note="dsRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:238007"
gene 482138..483025
/gene="era"
/locus_tag="MA5_01935"
/db_xref="GeneID:12007268"
CDS 482138..483025
/gene="era"
/locus_tag="MA5_01935"
/note="COG1159 GTPase"
/codon_start=1
/transl_table=11
/product="GTPase Era"
/protein_id="YP_005404645.1"
/db_xref="GI:383486965"
/db_xref="GeneID:12007268"
/translation="MTNQIQKTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTR
SIITGIVTLKDTQIILYDTPGIFEPKGMLEKAMVRCAWSSVYSADLVLSIIDSLKPLD
NIAHNILNQFCLLNIVPIFLLNKIDIESKYLNDIKAFLKITHPKSLLFPISALLGKNV
DVLLEYIKSKAKVSPWLYADDDITNLPMRFIAAEITREQLFLNLQQELPYKLTVQTEK
FEELKDKSIKINQVIVISRENYKAIILGKNGAKIKDIGVKSRVQLEQFFCVPVHLFLF
VKVHAFWENNQEFYQYMKI"
misc_feature 482153..483022
/gene="era"
/locus_tag="MA5_01935"
/note="GTPase [General function prediction only]; Region:
Era; COG1159"
/db_xref="CDD:224081"
misc_feature 482153..482650
/gene="era"
/locus_tag="MA5_01935"
/note="E. coli Ras-like protein (Era) is a multifunctional
GTPase; Region: Era; cd04163"
/db_xref="CDD:206726"
misc_feature 482180..482203
/gene="era"
/locus_tag="MA5_01935"
/note="G1 box; other site"
/db_xref="CDD:206726"
misc_feature order(482186..482206,482246..482248,482258..482266,
482330..482332,482507..482512,482516..482518,
482594..482599)
/gene="era"
/locus_tag="MA5_01935"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206726"
misc_feature order(482225..482227,482231..482275)
/gene="era"
/locus_tag="MA5_01935"
/note="Switch I region; other site"
/db_xref="CDD:206726"
misc_feature 482264..482266
/gene="era"
/locus_tag="MA5_01935"
/note="G2 box; other site"
/db_xref="CDD:206726"
misc_feature order(482318..482335,482393..482398)
/gene="era"
/locus_tag="MA5_01935"
/note="Switch II region; other site"
/db_xref="CDD:206726"
misc_feature 482321..482332
/gene="era"
/locus_tag="MA5_01935"
/note="G3 box; other site"
/db_xref="CDD:206726"
misc_feature 482507..482518
/gene="era"
/locus_tag="MA5_01935"
/note="G4 box; other site"
/db_xref="CDD:206726"
misc_feature 482594..482602
/gene="era"
/locus_tag="MA5_01935"
/note="G5 box; other site"
/db_xref="CDD:206726"
misc_feature 482756..482986
/gene="era"
/locus_tag="MA5_01935"
/note="KH domain; Region: KH_2; pfam07650"
/db_xref="CDD:203707"
gene 483114..483587
/gene="ruvC"
/locus_tag="MA5_01940"
/db_xref="GeneID:12007269"
CDS 483114..483587
/gene="ruvC"
/locus_tag="MA5_01940"
/EC_number="3.1.22.4"
/note="COG0817 Holliday junction resolvasome, endonuclease
subunit"
/codon_start=1
/transl_table=11
/product="Holliday junction resolvase"
/protein_id="YP_005404646.1"
/db_xref="GI:383486966"
/db_xref="GeneID:12007269"
/translation="MIVLGIDPALGKLGWAVVAKESTKLHYLASGTIKTHSKDEIHNR
LAFINSILEKVILEYQPNIAAIEETFVNTNNVTSLKLGYARGAIMSLIGRYNLDMQEF
KPNTVKKTVTGYGHAGKEQILYMIKHLISGTDLITNSDEADAVALAYTCLVAKKY"
misc_feature 483117..483578
/gene="ruvC"
/locus_tag="MA5_01940"
/note="Holliday junction resolvases (HJRs) are
endonucleases that specifically resolve Holliday junction
DNA intermediates during homologous recombination. HJR's
occur in archaea, bacteria, and in the mitochondria of
certain fungi, however this CD...; Region: RuvC_resolvase;
cd00529"
/db_xref="CDD:238294"
misc_feature order(483132..483134,483312..483314,483531..483533,
483540..483542)
/gene="ruvC"
/locus_tag="MA5_01940"
/note="active site"
/db_xref="CDD:238294"
misc_feature order(483144..483146,483213..483215,483330..483332,
483351..483353,483426..483428,483435..483437,
483468..483470)
/gene="ruvC"
/locus_tag="MA5_01940"
/note="putative DNA-binding cleft [nucleotide binding];
other site"
/db_xref="CDD:238294"
misc_feature order(483249..483251,483258..483260,483321..483323,
483336..483338,483345..483350,483357..483362,
483366..483371,483378..483380,483390..483395)
/gene="ruvC"
/locus_tag="MA5_01940"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238294"
gene complement(484849..485913)
/locus_tag="MA5_01945"
/db_xref="GeneID:12007270"
CDS complement(484849..485913)
/locus_tag="MA5_01945"
/note="COG3660 Predicted nucleoside-diphosphate-sugar
epimerase"
/codon_start=1
/transl_table=11
/product="putative nucleoside-diphosphate-sugar epimerase"
/protein_id="YP_005404647.1"
/db_xref="GI:383486967"
/db_xref="GeneID:12007270"
/translation="MNIWVIADDRTGNTHQAIALAAQLTGKYTTITLEYNFLAKLPNF
LLQYYPIHVKRELLQDIIDKLPPDMIITAGRRTAVLAFYLKKKFENIKLVQIMQPNLP
YNIFDAIILPYHDYRDLLYCGPAKILSKNIKSHCKVLNYSSRQHDIEKMMKIIPINGA
LNNITAKFSAASLELQKHYPHLKQFTAVIIGGNNKRFSFNEDIAILFSSLLNKIYSNQ
AIPFFISFSRRTPQIVKSIIKNNTHASTMIYDPSKDTDYNNPYIDMLANAKYIISTAD
SISMCSEAASSGKPLYIFYPPNFNSLKHKIFIEQLVEQKIARIFNESITMLEEYSYKP
LNEAKKVAEIIKFALKINKS"
misc_feature complement(484858..485913)
/locus_tag="MA5_01945"
/note="Predicted nucleoside-diphosphate-sugar epimerase
[Cell envelope biogenesis, outer membrane]; Region:
COG3660"
/db_xref="CDD:33458"
misc_feature complement(484867..485880)
/locus_tag="MA5_01945"
/note="Mitochondrial fission ELM1; Region: Mito_fiss_Elm1;
pfam06258"
/db_xref="CDD:191482"
gene complement(485913..486869)
/locus_tag="MA5_01950"
/db_xref="GeneID:12007271"
CDS complement(485913..486869)
/locus_tag="MA5_01950"
/note="COG0489 ATPases involved in ChromosomeMA5
partitioning"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404648.1"
/db_xref="GI:383486968"
/db_xref="GeneID:12007271"
/translation="MANLHQQQIIDKIQNITFKDGTFLNEVISDIIIKGNNIGFSIDI
SGKNKLEAEEIRLKAINKLNNIKEVNKITIVFTQSKTIDKKAQKPKHFVENVKKIILV
ASGKGGVGKSTISALIAQQLSLENYRVGIVDADIYGPSIPHIFGINGIPKTVEGRIVP
ILAQNIQIISIGFFVKAHSAIIYRGPMASKIIYQLLSNTRWNNLDYLIIDMPPGTGDI
HLSIIENYHLDGVIVVTTQQKISEIDVIRSIDLYRKLGLPILGIIENMIYMLESDHCG
YLSKKYHIPLIAQIPIMPQIANACDKSLPLTNLLTLPLEKYL"
misc_feature complement(485970..486707)
/locus_tag="MA5_01950"
/note="ATPases involved in chromosome partitioning [Cell
division and chromosome partitioning]; Region: Mrp;
COG0489"
/db_xref="CDD:223563"
misc_feature complement(485988..486575)
/locus_tag="MA5_01950"
/note="MRP (Multiple Resistance and pH adaptation) is a
homologue of the Fer4_NifH superfamily. Like the other
members of the superfamily, MRP contains a ATP-binding
domain at the N-termini. It is found in bacteria as a
membrane-spanning protein and functions...; Region:
MRP-like; cd02037"
/db_xref="CDD:238994"
misc_feature complement(486534..486557)
/locus_tag="MA5_01950"
/note="Walker A motif; other site"
/db_xref="CDD:238994"
gene 486968..488002
/locus_tag="MA5_01955"
/db_xref="GeneID:12007272"
CDS 486968..488002
/locus_tag="MA5_01955"
/note="COG0330 Membrane protease subunits,
stomatin/prohibitin homologs"
/codon_start=1
/transl_table=11
/product="HFLK protein (hflK)"
/protein_id="YP_005404649.1"
/db_xref="GI:383486969"
/db_xref="GeneID:12007272"
/translation="MLSKKYISILKKSPWKDFDSEKEDNIFTRPRKNQFTFDKLQFPF
NFNTKTIILAVGAMVILWLASGIYEIKEGEEAAVIRFGRFVRKGYPGLNYHFPSPFEN
IIVEKVKQSRRIEIGYRTNSSMRSGGDKNIVSESIMLTGDENIVSLNCDVMWHISNLE
DFIFNVQRPEETVKATVESSIREVIGNTPISWVLSDQKQEITYKIEKLAQKILDSYNA
GVMIEKVQLLKAEPPSEVIDAYRDVQTSKADKEKEINQAQAYNNKILPEARGTAAKII
QEAEGYREEVISKAEGDSQRFNAIYKQYATGRQVTRDRLYLEVVEEILGGSNKTIINN
ALLPHMLINR"
misc_feature 487124..487939
/locus_tag="MA5_01955"
/note="Band_7_HflK: The band 7 domain of flotillin
(reggie) like proteins. This group includes proteins
similar to prokaryotic HlfK (High frequency of
lysogenization K). Although many members of the band 7
family are lipid raft associated, prokaryote plasma...;
Region: Band_7_HflK; cd03404"
/db_xref="CDD:48216"
misc_feature 487166..487966
/locus_tag="MA5_01955"
/note="HflK protein; Region: hflK; TIGR01933"
/db_xref="CDD:130988"
gene 488146..489006
/locus_tag="MA5_01960"
/db_xref="GeneID:12007273"
CDS 488146..489006
/locus_tag="MA5_01960"
/note="COG0330 Membrane protease subunits,
stomatin/prohibitin homologs"
/codon_start=1
/transl_table=11
/product="HFLC protein (hflC)"
/protein_id="YP_005404650.1"
/db_xref="GI:383486970"
/db_xref="GeneID:12007273"
/translation="MQQKIYYIIFTIVFGLMLIASALFSVDQRQSAVVFQFGEAIRTI
ENPGLNIKIPFIQNVEFFDKRLLDVEVEAKELTAADGKRVIVDAYAKFQINNPVMFYK
TVHDYQGVKIRLTRNLESSMRKVIGKISLSSLLSQERSNVMLNILNQVNGEAKSFGID
VVDVRILRADLPKENSAAIYRRMQTAREKEATQIRAEGQEESVRIRSKADKESKIILA
KAYRDAQIIKGDGDEKAAKIYNAAYSVDPEFYKFYRSLLVYKNALKKEDTNFVISPEA
EVFKYLNLAK"
misc_feature 488158..488997
/locus_tag="MA5_01960"
/note="Membrane protease subunits, stomatin/prohibitin
homologs [Posttranslational modification, protein
turnover, chaperones]; Region: HflC; COG0330"
/db_xref="CDD:223407"
misc_feature 488212..488934
/locus_tag="MA5_01960"
/note="Band_7_HflC: The band 7 domain of flotillin
(reggie) like proteins. This group includes proteins
similar to prokaryotic HlfC (High frequency of
lysogenization C). Although many members of the band 7
family are lipid raft associated, prokaryote plasma...;
Region: Band_7_HflC; cd03405"
/db_xref="CDD:239499"
gene 489037..490578
/locus_tag="MA5_01965"
/db_xref="GeneID:12007274"
CDS 489037..490578
/locus_tag="MA5_01965"
/note="COG0265 Trypsin-like serine proteases, typically
periplasmic, contain C-terminal PDZ domain"
/codon_start=1
/transl_table=11
/product="periplasmic serine protease DO-like"
/protein_id="YP_005404651.1"
/db_xref="GI:383486971"
/db_xref="GeneID:12007274"
/translation="MVNLKIFLIVIVLMFNNIILAKENSNALKVVDQEENEFTAINSA
PLKISEAARYSFADIVEPLIPAVVNISTIEYVNDKSENSEKDLLQENKHLGFMSDVLE
KLNIPLNLEEIAKTPKSIPLGSGFIIAPNGLIVTNYHVIANVEKINIKLADNTEFLAK
LIGSDAKTDLALLKIDSEEPLPFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIIS
SKGRDIDVDTDNIVDNFIQTDAAINNGNSGGPMFNLDQKVIGVNTAIFSPLGTNIGIG
FAIPSNTAKPIIERLKKDGKVSRGRLGVTIQDLTEEISEVLGFKGTNGVLVSKVQENG
PGYKAGIKKGDIIIKFGDRLVKNTKKLRVIIADTPINQEVKLKILRDAQELELPIKVT
ADNEEVINDSTEETNKAVIINKKENNLSITKNNITFSNLTEELRKKYDIPQDKTGIVI
INIDEEESVFKLGDLITNINHDSIDDIRKLEVLYENAKKLEKQNILLLIERGDTSVFI
PLSVS"
misc_feature 489199..490566
/locus_tag="MA5_01965"
/note="periplasmic serine protease, Do/DeqQ family;
Region: degP_htrA_DO; TIGR02037"
/db_xref="CDD:162670"
misc_feature 489403..489819
/locus_tag="MA5_01965"
/note="Trypsin-like peptidase domain; Region: Trypsin_2;
pfam13365"
/db_xref="CDD:205544"
misc_feature 489934..490203
/locus_tag="MA5_01965"
/note="PDZ domain of tryspin-like serine proteases, such
as DegP/HtrA, which are oligomeric proteins involved in
heat-shock response, chaperone function, and apoptosis.
May be responsible for substrate recognition and/or
binding, as most PDZ domains bind...; Region:
PDZ_serine_protease; cd00987"
/db_xref="CDD:29044"
misc_feature order(489937..489948,489952..489954,490105..490110,
490117..490122)
/locus_tag="MA5_01965"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29044"
misc_feature 490312..490566
/locus_tag="MA5_01965"
/note="PDZ domain of tryspin-like serine proteases, such
as DegP/HtrA, which are oligomeric proteins involved in
heat-shock response, chaperone function, and apoptosis.
May be responsible for substrate recognition and/or
binding, as most PDZ domains bind...; Region:
PDZ_serine_protease; cd00987"
/db_xref="CDD:29044"
misc_feature order(490312..490314,490318..490320,490462..490467,
490474..490479)
/locus_tag="MA5_01965"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29044"
gene 490683..491426
/locus_tag="MA5_01970"
/db_xref="GeneID:12007275"
CDS 490683..491426
/locus_tag="MA5_01970"
/note="COG1054 Predicted sulfurtransferase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404652.1"
/db_xref="GI:383486972"
/db_xref="GeneID:12007275"
/translation="MNERITILSAYSFVNIIEPANLIPKLLLVGKKKYIRGTILLANE
GFNSSFSGSYENVNIVLKQLIALTGSKDVNVKINYSPVHPFQKLKVRLKREIIAMNVK
DLNVDVFKGHYIEPKDWDEFITKQNVILIDTRNEYEIDIGTFKSAINPRTETFKQFPA
WVQQNHALLQGKKIAMFCTGGIRCEKSTSLLKSIGYNEVYHLKGGILQYLEDTHNKNN
LWQGKCFVFDDRRAVADDLYPAEGYWLHR"
misc_feature 490683..491423
/locus_tag="MA5_01970"
/note="hypothetical protein; Validated; Region: PRK01415"
/db_xref="CDD:167229"
misc_feature 491013..491315
/locus_tag="MA5_01970"
/note="Member of the Rhodanese Homology Domain
superfamily. This CD includes Escherichia coli YceA,
Bacillus subtilis YbfQ, and similar uncharacterized
proteins; Region: RHOD_YceA; cd01518"
/db_xref="CDD:238776"
misc_feature 491214..491216
/locus_tag="MA5_01970"
/note="active site residue [active]"
/db_xref="CDD:238776"
gene 491564..491938
/locus_tag="MA5_01975"
/db_xref="GeneID:12007276"
CDS 491564..491938
/locus_tag="MA5_01975"
/note="COG2009 Succinate dehydrogenase/fumarate reductase,
cytochrome b subunit"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase cytochrome b-556
subunit"
/protein_id="YP_005404653.1"
/db_xref="GI:383486973"
/db_xref="GeneID:12007276"
/translation="MTKIKQEIYNKRPTSPHLTIYKPQISSTLSILHRMTGVALFFVV
SILVWWLILSKYDNNYLQLASCCIIKICLVAFSYSWCYHLCNGIRHLFWDIGYGFSIK
AVNITGWCVVVCSILLTMLLWV"
misc_feature 491597..491935
/locus_tag="MA5_01975"
/note="Succinate:quinone oxidoreductase (SQR) Type C
subfamily, Succinate dehydrogenase C (SdhC) subunit;
composed of bacterial SdhC and eukaryotic large cytochrome
b binding (CybL) proteins. SQR catalyzes the oxidation of
succinate to fumarate coupled to the...; Region:
SQR_TypeC_SdhC; cd03499"
/db_xref="CDD:239579"
misc_feature order(491597..491608,491621..491629,491633..491635,
491642..491644,491663..491665,491831..491833,
491840..491842,491846..491848)
/locus_tag="MA5_01975"
/note="Iron-sulfur protein interface; other site"
/db_xref="CDD:239579"
misc_feature order(491630..491632,491651..491656,491663..491665)
/locus_tag="MA5_01975"
/note="proximal quinone binding site [chemical binding];
other site"
/db_xref="CDD:239579"
misc_feature order(491663..491665,491696..491698,491705..491707,
491714..491719,491780..491782,491843..491845,
491927..491929)
/locus_tag="MA5_01975"
/note="SdhD (CybS) interface [polypeptide binding]; other
site"
/db_xref="CDD:239579"
misc_feature order(491663..491665,491681..491686,491810..491815)
/locus_tag="MA5_01975"
/note="proximal heme binding site [chemical binding];
other site"
/db_xref="CDD:239579"
gene 492097..492474
/locus_tag="MA5_01980"
/db_xref="GeneID:12007277"
CDS 492097..492474
/locus_tag="MA5_01980"
/note="COG2142 Succinate dehydrogenase, hydrophobic anchor
subunit"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase hydrophobic membrane
anchor protein"
/protein_id="YP_005404654.1"
/db_xref="GI:383486974"
/db_xref="GeneID:12007277"
/translation="MIYDFKAEIIKAKNSSFSKSGSHHWLLQRVTGVILALCSFWLIY
FMFTNKNNDINIIMWEFKKPFNIVILLITVTISLYHSVLGMRVVIEDYINCHKLRNTL
IIIVKLFCILTIVSFVVAIFYSG"
misc_feature 492163..492462
/locus_tag="MA5_01980"
/note="Succinate:quinone oxidoreductase (SQR) Type C
subfamily, Succinate dehydrogenase D (SdhD) subunit-like;
composed of predominantly uncharacterized bacterial
proteins with similarity to the E. coli SdhD subunit. One
characterized protein is the respiratory...; Region:
SQR_TypeC_SdhD_like; cd03495"
/db_xref="CDD:239575"
misc_feature order(492181..492183,492367..492372,492433..492435,
492442..492444)
/locus_tag="MA5_01980"
/note="putative SdhC subunit interface [polypeptide
binding]; other site"
/db_xref="CDD:239575"
misc_feature order(492190..492192,492334..492336,492346..492348)
/locus_tag="MA5_01980"
/note="putative proximal heme binding site [chemical
binding]; other site"
/db_xref="CDD:239575"
misc_feature order(492355..492357,492364..492369,492376..492378)
/locus_tag="MA5_01980"
/note="putative Iron-sulfur protein interface [polypeptide
binding]; other site"
/db_xref="CDD:239575"
misc_feature 492370..492372
/locus_tag="MA5_01980"
/note="putative proximal quinone binding site; other site"
/db_xref="CDD:239575"
gene 492608..494398
/gene="sdhA"
/locus_tag="MA5_01985"
/db_xref="GeneID:12007278"
CDS 492608..494398
/gene="sdhA"
/locus_tag="MA5_01985"
/EC_number="1.3.99.1"
/note="COG1053 Succinate dehydrogenase/fumarate reductase,
flavoprotein subunit"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase flavoprotein subunit"
/protein_id="YP_005404655.1"
/db_xref="GI:383486975"
/db_xref="GeneID:12007278"
/translation="MTKAYNIIHHKFDVVVVGAGGAGLRSAFGMAKEGLNTACITKIF
PTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILE
LEHYGVPFSRTVDGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLK
HKVQFFIEYFAIDLLMEDGECQGVVAWNLDDGSLHCFRAHNVVLATGGYGRAYFSATS
AHTCTGDGGGMVIRAGLPLQDMEFVQFHPTGIYSAGCLITEGARGEGGYLVNANGERF
MERYAPAAKDLASRDVVSRAMTIEIREGRGVGEHKDHVFLHLNHLSPEILHRRLPGIS
ETAKIFAGVDVTKDPIPVLPTVHYNMGGIPTNYQGQVIIKDGKNHNSIVNGIMAIGEA
ACVSVHGANRLGSNSLLDLVVFGRSSALKAAELIKPASPHKPLQKETLEKIINRFDKV
RYANGNILVADLRLKMQRTMQSHVSVFRTQKLLDEGVGMISEIRNRYKDIKINDKSLI
WNSDLVEALELDNLLDQALVTVCSAAARKESRGAHAREDYPDRNDRDWIKHTLSSIDD
SGKVVLDYKPVTLTTLTDAISAIPPVKRVY"
misc_feature 492608..494395
/gene="sdhA"
/locus_tag="MA5_01985"
/note="succinate dehydrogenase flavoprotein subunit;
Reviewed; Region: sdhA; PRK09078"
/db_xref="CDD:181641"
misc_feature 492701..493984
/gene="sdhA"
/locus_tag="MA5_01985"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 493994..494395
/gene="sdhA"
/locus_tag="MA5_01985"
/note="Fumarate reductase flavoprotein C-term; Region:
Succ_DH_flav_C; pfam02910"
/db_xref="CDD:202463"
gene 494518..495174
/locus_tag="MA5_01990"
/db_xref="GeneID:12007279"
CDS 494518..495174
/locus_tag="MA5_01990"
/note="COG0765 ABC-type amino acid transport system,
permease component"
/codon_start=1
/transl_table=11
/product="glutamine transport system permease GLNP (glnP)"
/protein_id="YP_005404656.1"
/db_xref="GI:383486976"
/db_xref="GeneID:12007279"
/translation="MLMYLLKYYPKILFIIEGTLVTLKYSVIAVILGLVIGMLLAICK
VNKNRVLRLFANFYTSIFRGTPLLVQLSIIYFAAPYIINIKFNVFMAGVISFALNSGA
YVSEVIRAGINTVDKGQFEAAEALAIPKFLIMKDIILPQAINNIFPSLVNELVNLIKE
SAIISMLGEMDLMRRAQIVSIETYNYFFPMLIAACCYYILVILISFIAKIIEKKMIVN
"
misc_feature 494560..495159
/locus_tag="MA5_01990"
/note="ABC-type arginine transport system, permease
component [Amino acid transport and metabolism]; Region:
ArtQ; COG4215"
/db_xref="CDD:33942"
misc_feature 494575..495135
/locus_tag="MA5_01990"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(494620..494625,494632..494637,494650..494652,
494680..494691,494695..494724,494731..494736,
494740..494742,494809..494814,494818..494820,
494824..494826,494833..494838,494842..494844,
494854..494859,494866..494868,494917..494919,
494959..494964,494971..494973,494992..495003,
495010..495015,495052..495057,495085..495090,
495097..495102,495106..495111,495118..495123,
495130..495135)
/locus_tag="MA5_01990"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(494698..494742,494992..495009)
/locus_tag="MA5_01990"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(494740..494742,494794..494796,495010..495012,
495046..495048,495055..495057,495085..495087)
/locus_tag="MA5_01990"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(494869..494907,494923..494928,494938..494940)
/locus_tag="MA5_01990"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 495336..495725
/gene="rpsL"
/locus_tag="MA5_01995"
/db_xref="GeneID:12007280"
CDS 495336..495725
/gene="rpsL"
/locus_tag="MA5_01995"
/note="COG0048 Ribosomal protein S12"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S12"
/protein_id="YP_005404657.1"
/db_xref="GI:383486977"
/db_xref="GeneID:12007280"
/translation="MPTYNQLVRFGRKSKTRKTKSPALESNPFKSGVCLVVKTVTPKK
PNSALRKIATVRLSNKRTVNAYIPGEKHSVKEHDRVLVRGGQVPDLPGVKYHIVLGAY
DIAGVKGRKQGRSRYGAHRKQVAATKK"
misc_feature 495342..495665
/gene="rpsL"
/locus_tag="MA5_01995"
/note="S12-like family, 30S ribosomal protein S12
subfamily; S12 is located at the interface of the large
and small ribosomal subunits of prokaryotes, chloroplasts
and mitochondria, where it plays an important role in both
tRNA and ribosomal subunit...; Region: Ribosomal_S12;
cd03368"
/db_xref="CDD:239466"
misc_feature order(495345..495350,495354..495359,495366..495371)
/gene="rpsL"
/locus_tag="MA5_01995"
/note="S17 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:239466"
misc_feature 495345..495347
/gene="rpsL"
/locus_tag="MA5_01995"
/note="S8 interaction site; other site"
/db_xref="CDD:239466"
misc_feature order(495369..495377,495411..495413,495417..495422,
495426..495428,495471..495476,495480..495488,
495507..495509,495531..495533,495540..495545,
495582..495587,495597..495602,495663..495665)
/gene="rpsL"
/locus_tag="MA5_01995"
/note="16S rRNA interaction site [nucleotide binding];
other site"
/db_xref="CDD:239466"
misc_feature order(495462..495467,495597..495599)
/gene="rpsL"
/locus_tag="MA5_01995"
/note="streptomycin interaction site [chemical binding];
other site"
/db_xref="CDD:239466"
misc_feature 495465..495470
/gene="rpsL"
/locus_tag="MA5_01995"
/note="23S rRNA interaction site [nucleotide binding];
other site"
/db_xref="CDD:239466"
misc_feature order(495468..495485,495543..495569)
/gene="rpsL"
/locus_tag="MA5_01995"
/note="aminoacyl-tRNA interaction site (A-site)
[nucleotide binding]; other site"
/db_xref="CDD:239466"
gene 495759..496241
/locus_tag="MA5_02000"
/db_xref="GeneID:12007281"
CDS 495759..496241
/locus_tag="MA5_02000"
/note="COG0049 Ribosomal protein S7"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S7"
/protein_id="YP_005404658.1"
/db_xref="GI:383486978"
/db_xref="GeneID:12007281"
/translation="MSRRHVAEKRIILPDMKYNSILLSRFINNIMKAGKKAVAEKIVY
SALNKIEKKHSVDPYQTFNNAMHNVKPHLEVTSVRVGGANYQVPTHVDERRGYALASR
WIINAASKRSEKMMIDKLAEELFEASNNRGVAIKKKEDTHKMAEANKAFSHFSPKKMK
"
misc_feature 495759..496220
/locus_tag="MA5_02000"
/note="30S ribosomal protein S7; Validated; Region:
PRK05302"
/db_xref="CDD:235398"
gene 496253..498352
/locus_tag="MA5_02005"
/db_xref="GeneID:12007282"
CDS 496253..498352
/locus_tag="MA5_02005"
/note="COG0480 Translation elongation factors (GTPases)"
/codon_start=1
/transl_table=11
/product="elongation factor G"
/protein_id="YP_005404659.1"
/db_xref="GI:383486979"
/db_xref="GeneID:12007282"
/translation="MSKINKLEQIRNIGICAHIDAGKTTTTERILYYTGKSHKIGEVH
EGGATMDWMEQEQERGITITSAATTCRWQDKVINIIDTPGHVDFTIEVERSLRVLDGA
VAVFDGVAGVEPQSETVWRQADKYNVPRMCFVNKMDRMGADFYRCVEMIKDRLGARSL
IIQLPIGIEENFKGIVNLIKMKAVIWKDESLGAEYFEEDIPADMQDKAAEYRARLLDM
VVELDDTIMEQYLSGAEITEEQIKILIRKGTIEARFYPILCGSAFKNKGVQPLLDAIV
DFLPSPIDIGIVKGIEVSTSEEKDFPISIVEPFSALAFKIMNDPFVGSLTFIRIYSGK
ITSGATVINTVKNKREKIGRMLLMHANNREDIKEASAGDIVALAGLKDTSTGDTLSDI
DKQVVLERMEFPEPVIELAVEPKSTADQEKMGLALSRLAAEDPSFRVSTDHETGQTVI
KGMGELHLEIIIDRMRREFKVEANIGAPQVAYRETITTACEIDYTHKKQSGGAGQFAR
VKIIFEPLKDVIDLKDEDKNKTFVFESKIVGGAVPKEYIPGVEKGLNNIRETGVIAGY
PMIDFKATLVDGAFHDVDSSVLAFEIAAKGAFREGMQKGNPKLLEPIMKVEVITPDEY
MGDIIGDLNSRRGQIQNMDPRGNAQVVTAHVPLAEMFGYVNTLRSLSQGRAQFSMIFS
HYDQVPSQVADMIKTKK"
misc_feature 496253..498349
/locus_tag="MA5_02005"
/note="elongation factor G; Reviewed; Region: PRK00007"
/db_xref="CDD:178789"
misc_feature 496286..497098
/locus_tag="MA5_02005"
/note="Elongation factor G (EF-G) family involved in both
the elongation and ribosome recycling phases of protein
synthesis; Region: EF-G; cd01886"
/db_xref="CDD:206673"
misc_feature 496301..496324
/locus_tag="MA5_02005"
/note="G1 box; other site"
/db_xref="CDD:206673"
misc_feature order(496304..496306,496310..496312,496322..496327,
496334..496336,496343..496348,496448..496453,
496505..496510,496577..496582,496688..496690,
496700..496702)
/locus_tag="MA5_02005"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206673"
misc_feature order(496310..496312,496316..496327,496655..496660,
496664..496666,497033..497041)
/locus_tag="MA5_02005"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206673"
misc_feature 496391..496450
/locus_tag="MA5_02005"
/note="Switch I region; other site"
/db_xref="CDD:206673"
misc_feature 496436..496438
/locus_tag="MA5_02005"
/note="G2 box; other site"
/db_xref="CDD:206673"
misc_feature 496493..496504
/locus_tag="MA5_02005"
/note="G3 box; other site"
/db_xref="CDD:206673"
misc_feature 496499..496555
/locus_tag="MA5_02005"
/note="Switch II region; other site"
/db_xref="CDD:206673"
misc_feature 496655..496666
/locus_tag="MA5_02005"
/note="G4 box; other site"
/db_xref="CDD:206673"
misc_feature 497033..497041
/locus_tag="MA5_02005"
/note="G5 box; other site"
/db_xref="CDD:206673"
misc_feature 497177..497425
/locus_tag="MA5_02005"
/note="EFG_mtEFG_II: this subfamily represents the domain
II of elongation factor G (EF-G) in bacteria and, the
C-terminus of mitochondrial Elongation factor G1 (mtEFG1)
and G2 (mtEFG2)_like proteins found in eukaryotes. During
the process of peptide synthesis...; Region: EFG_mtEFG_II;
cd04088"
/db_xref="CDD:58095"
misc_feature 497696..498070
/locus_tag="MA5_02005"
/note="EFG_mtEFG1_IV: domains similar to domain IV of the
bacterial translational elongation factor (EF) EF-G.
Included in this group is a domain of mitochondrial
Elongation factor G1 (mtEFG1) proteins homologous to
domain IV of EF-G. Eukaryotic cells harbor 2...; Region:
EFG_mtEFG1_IV; cd01434"
/db_xref="CDD:58274"
misc_feature 498083..498316
/locus_tag="MA5_02005"
/note="EFG_mtEFG_C: domains similar to the C-terminal
domain of the bacterial translational elongation factor
(EF) EF-G. Included in this group is the C-terminus of
mitochondrial Elongation factor G1 (mtEFG1) and G2
(mtEFG2) proteins. Eukaryotic cells harbor 2...; Region:
EFG_mtEFG_C; cd03713"
/db_xref="CDD:58065"
gene 498496..498571
/locus_tag="MA5_t04337"
/db_xref="GeneID:12007283"
tRNA 498496..498571
/locus_tag="MA5_t04337"
/product="tRNA-Trp"
/db_xref="GeneID:12007283"
gene 498715..498915
/gene="secE"
/locus_tag="MA5_02010"
/db_xref="GeneID:12007284"
CDS 498715..498915
/gene="secE"
/locus_tag="MA5_02010"
/note="COG0690 Preprotein translocase subunit SecE"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecE"
/protein_id="YP_005404660.1"
/db_xref="GI:383486980"
/db_xref="GeneID:12007284"
/translation="MFREYKIYKFFEQVKQETYKVFWPNKKELIASTLVVVATVFIFS
LICLVLDYSIHNIMQLLLTIGK"
misc_feature 498715..498897
/gene="secE"
/locus_tag="MA5_02010"
/note="preprotein translocase subunit SecE; Reviewed;
Region: secE; PRK07597"
/db_xref="CDD:236066"
gene 498931..499509
/gene="nusG"
/locus_tag="MA5_02015"
/db_xref="GeneID:12007285"
CDS 498931..499509
/gene="nusG"
/locus_tag="MA5_02015"
/note="COG0250 Transcription antiterminator"
/codon_start=1
/transl_table=11
/product="transcription antitermination protein NusG"
/protein_id="YP_005404661.1"
/db_xref="GI:383486981"
/db_xref="GeneID:12007285"
/translation="MTEQTIDNILPASKNNVKQWYVVHTASGAEKRIKEDILRKIAKQ
KMTDFFGDILIPVFGVSEVKRGKNVKVEKKLMPSYILIKMNMTDKSWHLVKNIPGVTG
FLGSKIVPKALTESEIQNIFNNLEAEAKVAKNSKLYEVGEIVTVTDGPFETFMGTVEA
IDKARNRLKVSVSIFGKATPIELNFNQVKKSD"
misc_feature 498985..499299
/gene="nusG"
/locus_tag="MA5_02015"
/note="Bacterial N-Utilization Substance G (NusG)
N-terminal (NGN) domain, subgroup 1; Region: NGN_Bact_1;
cd09891"
/db_xref="CDD:193580"
misc_feature 498988..499500
/gene="nusG"
/locus_tag="MA5_02015"
/note="transcription termination/antitermination factor
NusG; Region: nusG; TIGR00922"
/db_xref="CDD:162110"
misc_feature order(498994..498996,499096..499098,499156..499158,
499165..499167,499171..499173,499267..499269,
499291..499293)
/gene="nusG"
/locus_tag="MA5_02015"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:193580"
gene 499642..500079
/gene="rplK"
/locus_tag="MA5_02020"
/db_xref="GeneID:12007286"
CDS 499642..500079
/gene="rplK"
/locus_tag="MA5_02020"
/note="COG0080 Ribosomal protein L11"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L11"
/protein_id="YP_005404662.1"
/db_xref="GI:383486982"
/db_xref="GeneID:12007286"
/translation="MSKKAIKGYINLIIPAAGATPAPPIGPALGQRKVNIAAFCKDFN
DATNGMEKGVPLPTVITVYEDSSFSFKVKTPPASYFLKKYAKITKGSSATKKEAMVGK
VTIDDCREIAKLKISDLNTKNIEAATKIICGSAASMGLEVVGN"
misc_feature 499642..500073
/gene="rplK"
/locus_tag="MA5_02020"
/note="50S ribosomal protein L11; Validated; Region: rplK;
PRK00140"
/db_xref="CDD:234661"
misc_feature 499732..500067
/gene="rplK"
/locus_tag="MA5_02020"
/note="Ribosomal protein L11. Ribosomal protein L11,
together with proteins L10 and L7/L12, and 23S rRNA, form
the L7/L12 stalk on the surface of the large subunit of
the ribosome. The homologous eukaryotic cytoplasmic
protein is also called 60S ribosomal...; Region:
Ribosomal_L11; cd00349"
/db_xref="CDD:100101"
misc_feature order(499732..499734,499867..499875,499885..499887,
499906..499908,499984..499986,499999..500007,
500017..500019,500026..500031,500038..500043,
500047..500055)
/gene="rplK"
/locus_tag="MA5_02020"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:100101"
misc_feature 499732..499734
/gene="rplK"
/locus_tag="MA5_02020"
/note="putative thiostrepton binding site; other site"
/db_xref="CDD:100101"
misc_feature order(499816..499818,499822..499833,499843..499845,
499849..499854,499987..499992,499999..500004)
/gene="rplK"
/locus_tag="MA5_02020"
/note="L7/L12 interface [polypeptide binding]; other site"
/db_xref="CDD:100101"
misc_feature order(499924..499926,499933..499935)
/gene="rplK"
/locus_tag="MA5_02020"
/note="L25 interface [polypeptide binding]; other site"
/db_xref="CDD:100101"
gene 500082..500798
/gene="rplA"
/locus_tag="MA5_02025"
/db_xref="GeneID:12007287"
CDS 500082..500798
/gene="rplA"
/locus_tag="MA5_02025"
/note="COG0081 Ribosomal protein L1"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L1"
/protein_id="YP_005404663.1"
/db_xref="GI:383486983"
/db_xref="GeneID:12007287"
/translation="MSNKDICVKISGSKKIREAREKVKSDTLYNLTNAVTQLKSASYV
KFDPTLEIVMKLGIDPRHSDQIVRGVVNLPAGTGKTIRVAVICKEEREEEAKSAGADL
VGSINIIDEIKAGQINFDVCIATPDMMSMISSVARILGPKGLMPNPKLGTVTLDIKNA
IKNAKSGQVEYRAEKAGIIHAGLGKLSFSDQDLLKNLNAFIGAVIKAKPVGLKGNYLK
AIYLSSTMGASVQIDLTSIS"
misc_feature 500172..500777
/gene="rplA"
/locus_tag="MA5_02025"
/note="Ribosomal protein L1. The L1 protein, located near
the E-site of the ribosome, forms part of the L1 stalk
along with 23S rRNA. In bacteria and archaea, L1
functions both as a ribosomal protein that binds rRNA, and
as a translation repressor that binds...; Region:
Ribosomal_L1; cd00403"
/db_xref="CDD:88601"
misc_feature order(500211..500219,500226..500228,500232..500234,
500238..500240,500244..500246,500607..500609,
500613..500615,500619..500621,500757..500762,
500766..500768)
/gene="rplA"
/locus_tag="MA5_02025"
/note="mRNA/rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:88601"
gene 500886..501395
/gene="rplJ"
/locus_tag="MA5_02030"
/db_xref="GeneID:12007288"
CDS 500886..501395
/gene="rplJ"
/locus_tag="MA5_02030"
/note="COG0244 Ribosomal protein L10"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L10"
/protein_id="YP_005404664.1"
/db_xref="GI:383486984"
/db_xref="GeneID:12007288"
/translation="MLRSEKPVAVEDIVNIYKESPSVIITHYHGLTVSQVSSLREELK
SKEAGFKVVKNTLAKIAAKQTGLDSITNLFAGPTAIVYSKEPVEMARLVVNFANSNDN
LKIIGGIVDNHILDAYSIKELSKLPSLHELRGKIVGLLQAPATKVVGVLQATSSSIAR
VIHAHAIKH"
misc_feature 500889..501356
/gene="rplJ"
/locus_tag="MA5_02030"
/note="Ribosomal protein L10 family, L10 subfamily;
composed of bacterial 50S ribosomal protein and eukaryotic
mitochondrial 39S ribosomal protein, L10. L10 occupies the
L7/L12 stalk of the ribosome. The N-terminal domain (NTD)
of L10 interacts with L11 protein...; Region:
Ribosomal_L10; cd05797"
/db_xref="CDD:240223"
misc_feature order(500901..500906,500913..500915,501045..501056,
501063..501065)
/gene="rplJ"
/locus_tag="MA5_02030"
/note="23S rRNA interface [nucleotide binding]; other
site"
/db_xref="CDD:240223"
misc_feature order(501144..501146,501213..501215,501222..501224,
501270..501272,501279..501284,501291..501296,
501300..501317,501321..501329,501336..501341,
501345..501350,501354..501356)
/gene="rplJ"
/locus_tag="MA5_02030"
/note="Interface with L7/L12 ribosomal proteins
[polypeptide binding]; other site"
/db_xref="CDD:240223"
gene 501584..501961
/gene="rplL"
/locus_tag="MA5_02035"
/db_xref="GeneID:12007289"
CDS 501584..501961
/gene="rplL"
/locus_tag="MA5_02035"
/note="COG0222 Ribosomal protein L7/L12"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L7/L12"
/protein_id="YP_005404665.1"
/db_xref="GI:383486985"
/db_xref="GeneID:12007289"
/translation="MADLAKIEEQLSSLTLMQAAELVKMLEEKWGVSAAAPITVASAG
VAAPLAEAVTEKTEFEVVLTATGDKKVEVIKIVKDITGLGLIEAKKLVDEAPKSIKNN
VKKAEAEEIKSKLEAAGAKVELK"
misc_feature 501587..501955
/gene="rplL"
/locus_tag="MA5_02035"
/note="Ribosomal protein L7/L12. Ribosomal protein L7/L12
refers to the large ribosomal subunit proteins L7 and L12,
which are identical except that L7 is acetylated at the N
terminus. It is a component of the L7/L12 stalk, which is
located at the surface of...; Region: Ribosomal_L7_L12;
cd00387"
/db_xref="CDD:100102"
misc_feature order(501587..501589,501626..501634,501641..501646,
501653..501655,501662..501664,501698..501700,
501707..501712,501716..501724,501752..501757,
501821..501823,501824..501829,501833..501835,
501839..501844,501884..501889,501893..501895,
501902..501904)
/gene="rplL"
/locus_tag="MA5_02035"
/note="core dimer interface [polypeptide binding]; other
site"
/db_xref="CDD:100102"
misc_feature order(501596..501598,501605..501607,501617..501619,
501656..501658,501671..501673)
/gene="rplL"
/locus_tag="MA5_02035"
/note="peripheral dimer interface [polypeptide binding];
other site"
/db_xref="CDD:100102"
misc_feature order(501638..501640,501647..501652,501662..501664,
501671..501673)
/gene="rplL"
/locus_tag="MA5_02035"
/note="L10 interface [polypeptide binding]; other site"
/db_xref="CDD:100102"
misc_feature order(501794..501799,501806..501811,501818..501820,
501836..501841,501848..501850)
/gene="rplL"
/locus_tag="MA5_02035"
/note="L11 interface [polypeptide binding]; other site"
/db_xref="CDD:100102"
misc_feature order(501797..501799,501809..501811,501818..501820,
501836..501841,501848..501850)
/gene="rplL"
/locus_tag="MA5_02035"
/note="putative EF-Tu interaction site [polypeptide
binding]; other site"
/db_xref="CDD:100102"
misc_feature order(501797..501799,501806..501811,501818..501820)
/gene="rplL"
/locus_tag="MA5_02035"
/note="putative EF-G interaction site [polypeptide
binding]; other site"
/db_xref="CDD:100102"
gene 502815..506939
/gene="rpoB"
/locus_tag="MA5_02040"
/db_xref="GeneID:12007290"
CDS 502815..506939
/gene="rpoB"
/locus_tag="MA5_02040"
/EC_number="2.7.7.6"
/note="COG0085 DNA-directed RNA polymerase, beta
subunit/140 kD subunit"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit beta"
/protein_id="YP_005404666.1"
/db_xref="GI:383486986"
/db_xref="GeneID:12007290"
/translation="MVSLRDNIESQPLSHNRRIRKNFGHINLVADIPNLIEIQKNSYE
KNFLQLNIKDSERKNKGLQSILNSIFPISDSSNIANLEFVKYEFDTPKYDVDECSQRS
LSYAAPLKVTLRLSIWDIDEDTGTREIKGIKEQEVYMGDIPLMTKNGTFIINGTERVV
VSQMHRSPGVFFYHDEGKVHSSGKLLYSARVIPYRGSWLDFEFDAKDIIYFRIDRKRK
LYATTLLRAIGMSTEEIIKFYYNSVTYKFVKNKGWSVKFIPQHITAHRLTSDLVDADT
GNVLLKAGQKITLRLAQKYFGVGLNNILVTHETLIGKYLSEDLRDPASDEVLAKIGEM
ITSDMLKVINDLKIKNVNVLVINPQSGPYIRNTLFADKNQDREAALCDIFRVLRPGEP
ANIEAAESLFYNLFFDAERYDLSEVGRIKMNSRLELNISEEVTVLTIDDIKNIVRILV
ELKDGKGIIDDIDHLGNRRVRSVGELIENQFRIGLVRMEKSVIERMSAGDVDTVMPHD
LVNSKILVSVVKEFFSTSQLSQFMDQTNPLSEITHKRRLSALGPGGLSRDRAGFEVRD
VHPTHYGRICPIETPEGQNIGLINSMATYARINKHGFIESPYRRVKNGYVTDEVVYLS
AIEEGKYKIGQANSKVDQDGKLQGEFINCRVEGGNFVMVEPDEVDFIDVTPMQVVSVA
ASLIPFLENDDANRALMGSNMQRQAVPLIKTEAPFVGTGVEGVVAKDSGASVLALHDG
IVERVDSNRIVIRTLEQKVDGSPSVDIYNLLKFQKSNHNTCINQKPLVKVGHYVKKND
IIADGPSTDNGEIALGRNVLVAFLPWNGYNFEDSILISERIVKEDVFTSIHIEEFEVI
ARDTRLGPEEITRDIPNVSEEALRHLDEVGIIYVGAEVKAGDILVGKVTPKSESPITP
EEKLLRAIFGEKAFDVKDSSLHVPSGVSGTVVEVRIFSRRGVEKDQRAIAIERQQIEK
LAKDRDDELEIIEHFVFSWLEKLLVGHVIINGPKQITAGQTITTEMLKGLSKGQLWQI
TVEDANVMNEIEQIKIHYDEKKYALDKRFTTKVEKLQSDDDLPQGALKVVKVFIATKH
KLQPGDKMAGRHGNKGVISRIVPEEDMPFLEDGTVVDIVLNPLGLPSRMNIGQILETH
LGWASINLAKKISTLVKEYKDNHIDIEEIKKFLLELYGKDINYILEGSEEEIISFCNK
VSKGVYFATPVFDGAKVQDVKDMLELAGQDLSGQVKLIDGRTGEYFDRLVTVGHKYLL
KLHHLVDNKIHSRSIGPYSLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYTLQEML
TVKSDDVNGRIKTYDSIVRGENNFESGIPESFNVMIKEFRSLCLNVKLEVTPSK"
misc_feature 502845..>505673
/gene="rpoB"
/locus_tag="MA5_02040"
/note="DNA-directed RNA polymerase subunit beta; Reviewed;
Region: rpoB; PRK00405"
/db_xref="CDD:179007"
misc_feature 502917..>503522
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cl04593"
/db_xref="CDD:156170"
misc_feature <503931..504227
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RNA polymerase Rpb2, domain 2; Region:
RNA_pol_Rpb2_2; pfam04561"
/db_xref="CDD:203048"
misc_feature <504129..505937
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cd00653"
/db_xref="CDD:73223"
misc_feature order(505164..505169,505260..505262,505266..505268,
505329..505331,505338..505340,505770..505772,
505809..505811,505887..505889)
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RPB10 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(505293..505295,505335..505337,505767..505769)
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RPB11 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(505335..505340,505350..505352,505734..505736,
505740..505742,505770..505778,505785..505787,
505791..505796)
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RPB3 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(505350..505352,505461..505463,505467..505469,
505479..505487,505491..505493)
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RPB12 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature <506016..506921
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RNA polymerase beta subunit. RNA polymerases
catalyse the DNA dependent polymerization of RNA.
Prokaryotes contain a single RNA polymerase compared to
three in eukaryotes (not including mitochondrial. and
chloroplast polymerases). Each RNA polymerase...; Region:
RNA_pol_B_RPB2; cd00653"
/db_xref="CDD:73223"
misc_feature order(506067..506069,506073..506075,506148..506156,
506163..506165,506169..506174,506544..506567,
506571..506573)
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RPB3 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(506121..506123,506127..506129,506133..506135,
506199..506201,506205..506207,506214..506216,
506223..506225,506238..506240,506250..506252,
506460..506462,506541..506543,506565..506573,
506577..506579,506616..506618,506625..506633,
506637..506642,506703..506711,506721..506723,
506727..506732,506736..506738,506742..506759,
506763..506780,506790..506792,506859..506861,
506871..506873,506877..506879,506883..506888,
506892..506894,506898..506909,506913..506915,
506919..506921)
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RPB1 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(506145..506147,506547..506549)
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RPB11 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
misc_feature order(506148..506150,506187..506189,506427..506432,
506436..506438,506529..506531,506580..506582)
/gene="rpoB"
/locus_tag="MA5_02040"
/note="RPB10 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:73223"
gene 507096..511214
/locus_tag="MA5_02045"
/db_xref="GeneID:12007291"
CDS 507096..511214
/locus_tag="MA5_02045"
/EC_number="2.7.7.6"
/note="COG0086 DNA-directed RNA polymerase, beta'
subunit/160 kD subunit"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit beta'"
/protein_id="YP_005404667.1"
/db_xref="GI:383486987"
/db_xref="GeneID:12007291"
/translation="MSVVNFYGQLSNTQQFDQIRINIASPDQVRSWSFGEVTKPETIN
YRTFKPEKDGLFCARIFGPVKDYECLCGKYKRMKNRGITCEKCGVEVTVSRVRRERMG
HIELAAPVAHIWFLKSLPSRISTLLDMTMRDVEKILYFENYVVVDPGLSILQKGELLT
EEELQKAKDKYGEDAFTASIGAEVIQQMLKELDFSKLKQELYDELHITSSEVKKKKLV
KRLKLVEDFLESENKPEWMIMDVLPVIPPEIRPLVMLDGGRFATSDLNELYRRVINRN
NRLKKLIESKAPDIIVRNEKRMLQEAVDALFDNGRRGRAAKNANKRPFKSLSDMLKGK
QGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSKLELYGIAT
TIKAAKRMVEAEKPEVWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPLLIEGKAIQLH
PLVCAAFNADFDGDQMAVHIPLSIEAQLEARVFMMSTNNILSPANGRPIIVPDKDIVL
GLYYLTIAFDNEVGEGMMFSDLAEMEHALYNKFITIHTKIKYRRDQLNAEGKMVPVII
DTTYGRLMVGELLPSNPNIEFKFINKQLTKKDISLVIDLVYRHCGQKATVIFADQLMK
LGFKYACSSGISFGMDDMVVPESKSTHINETQLEIKEFEQQYSNGLITYGEKYNKVVD
AWSRCTDRVANDMMKEIATPPVNDYPNHQKINAIYMMAISGARGSFQQIKQLGGMRGL
MTKSNGQIIQTPIISNFKEGLTEFECFNSANGMRKGQIDTALKTASSGYLTRKLVDVA
QDCIITEKDCGTDKGIEVKSVIEGGEIIVPLAEKILGRTAAIDIFHPVTNDLILNKGE
LINESKLEQIESAGLDRIMIKSVLTCESSTGICSICYGRDLATGTLVSEGEAIGVIAA
QSIGEPGTQLTMRTFHIGGAATKGAEVSSVEASYDAKVKIISRNVVINSEERKIVMSR
NCELLLLDNNGNEKARHKIPYGARLLVDDGDMVIKTQKLAEWDPYTIPIITEKSGKVL
FKDMVEGISIRDVTDEATGIPSKVIIESKQYSRGAELRPRIQLLDSKGEVITLSNGLE
ARYYLPVGAVLSVEDGIQISVGDIIARIPKESTTTKDITGGLPRVAELVEARRPKDHA
VIAEVDGRVEFGKDYKSKRRIIIHPIDGTMSIEYMVPKGKHVVVNEGDFVKKGDLLID
GNPVLQDILKVMGVEVLANYIVKEVQAVYRLQGVKIDDKHIEVIIRQMLQKVEVTDSG
GTTLLVGEKIDRHEFDEINAKAMKNGLKPAEAQLILQGITKASLQTRSFISAASFQET
TRVLTEAAIAGKVDKLRGLKENVIVGRLVPAGTGYFMDKMRKAAVKLDEENV"
misc_feature 507141..508121
/locus_tag="MA5_02045"
/note="RNA polymerase Rpb1, domain 1; Region:
RNA_pol_Rpb1_1; pfam04997"
/db_xref="CDD:218370"
misc_feature 507150..509636
/locus_tag="MA5_02045"
/note="DNA-directed RNA polymerase, beta' subunit/160 kD
subunit [Transcription]; Region: RpoC; COG0086"
/db_xref="CDD:223164"
misc_feature 507798..508628
/locus_tag="MA5_02045"
/note="RNA polymerase I subunit A N-terminus; Region:
RPOLA_N; smart00663"
/db_xref="CDD:214767"
misc_feature 508560..509021
/locus_tag="MA5_02045"
/note="RNA polymerase Rpb1, domain 3; Region:
RNA_pol_Rpb1_3; pfam04983"
/db_xref="CDD:218361"
misc_feature 509106..509369
/locus_tag="MA5_02045"
/note="RNA polymerase Rpb1, domain 4; Region:
RNA_pol_Rpb1_4; pfam05000"
/db_xref="CDD:218372"
misc_feature 509799..>509903
/locus_tag="MA5_02045"
/note="Largest subunit of RNA polymerase (RNAP),
C-terminal domain; Region: RNAP_largest_subunit_C;
cl11429"
/db_xref="CDD:142634"
misc_feature 509814..509816
/locus_tag="MA5_02045"
/note="Rpb1 - Rpb6 interaction site [polypeptide binding];
other site"
/db_xref="CDD:132719"
misc_feature <510510..510704
/locus_tag="MA5_02045"
/note="PTS_IIA, PTS system, glucose/sucrose specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This family...; Region:
PTS_IIA_glc; cl00162"
/db_xref="CDD:241650"
misc_feature <510711..511160
/locus_tag="MA5_02045"
/note="Largest subunit (beta') of Bacterial DNA-dependent
RNA polymerase (RNAP), C-terminal domain; Region:
RNAP_beta'_C; cd02655"
/db_xref="CDD:132721"
misc_feature order(511002..511004,511047..511052)
/locus_tag="MA5_02045"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:132721"
misc_feature order(511092..511094,511110..511112,511128..511130,
511137..511142,511152..511154)
/locus_tag="MA5_02045"
/note="Rpb1 (beta') - Rpb2 (beta) interaction site
[polypeptide binding]; other site"
/db_xref="CDD:132721"
gene 512205..513707
/locus_tag="MA5_02050"
/db_xref="GeneID:12007292"
CDS 512205..513707
/locus_tag="MA5_02050"
/EC_number="3.4.11.1"
/note="COG0260 Leucyl aminopeptidase"
/codon_start=1
/transl_table=11
/product="multifunctional aminopeptidase A"
/protein_id="YP_005404668.1"
/db_xref="GI:383486988"
/db_xref="GeneID:12007292"
/translation="MLNINFVNEESSTNQGLIVFIDEQLKLNNNLIALDQQHYELISK
TIQNKLQFSGNYGQITVVPSVIKSCAVKYLIIVGLGNVEKLTEAKIEELGGKILQHAT
CAKIATIGLKIINRINRFTSPTFTSLIASGAFLASYRFHKYKTTLKEVEKFAVESIEI
LTDNNSEAMKLFEVKKLIAEAVFFTRDISNEPSNIKTPQVYAERIVEILEPLGVNIDV
IGEHDIKNLGMGALLGVGQGSQNESKLVVMEYKGGSRDDSTLALVGKGVIFDTGGISL
KPSSNMHLMRYDMAGSAAVVGTIIALASQKVPVNVVGVVGLVENMQSGNAQRPGDVVV
TMSGQTAEVLNTDAEGRLVLADTVWYVQEKFNPKCVIDVATLTGAITVALGSTYAGCF
SNNDELADKLIKAGEAVNEKLWRMPLHDDYDAMINSDIADIANIGNVPGAAGSCTAAH
FIKRFIKDGVDWAHLDIAGVANSNNASALCPKGAVGYGVRLLEKFIKEYN"
misc_feature 512205..513698
/locus_tag="MA5_02050"
/note="multifunctional aminopeptidase A; Provisional;
Region: PRK00913"
/db_xref="CDD:234863"
misc_feature 512250..513692
/locus_tag="MA5_02050"
/note="Cytosol aminopeptidase family, N-terminal and
catalytic domains. Family M17 contains zinc- and
manganese-dependent exopeptidases ( EC 3.4.11.1),
including leucine aminopeptidase. They catalyze removal of
amino acids from the N-terminus of a protein and...;
Region: Peptidase_M17; cd00433"
/db_xref="CDD:238247"
misc_feature order(512346..512351,512391..512393,512421..512423,
512466..512468,512772..512774,512778..512786,
512916..512918,512922..512924,513009..513011,
513027..513029,513042..513044,513051..513053,
513060..513065,513159..513161,513165..513176,
513180..513182,513186..513200,513216..513218,
513222..513224,513234..513236,513345..513359,
513366..513368,513444..513449,513453..513455,
513468..513470,513474..513479,513492..513494,
513498..513500,513531..513536,513540..513542,
513648..513650)
/locus_tag="MA5_02050"
/note="interface (dimer of trimers) [polypeptide binding];
other site"
/db_xref="CDD:238247"
misc_feature order(512997..512999,513012..513014,513033..513035,
513066..513068,513243..513245,513249..513251,
513255..513257,513330..513332)
/locus_tag="MA5_02050"
/note="Substrate-binding/catalytic site; other site"
/db_xref="CDD:238247"
misc_feature order(512997..512999,513012..513014,513066..513068,
513243..513245,513249..513251)
/locus_tag="MA5_02050"
/note="Zn-binding sites [ion binding]; other site"
/db_xref="CDD:238247"
gene 513799..514593
/locus_tag="MA5_02055"
/db_xref="GeneID:12007293"
CDS 513799..514593
/locus_tag="MA5_02055"
/note="COG1192 ATPases involved in ChromosomeMA5
partitioning"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404669.1"
/db_xref="GI:383486989"
/db_xref="GeneID:12007293"
/translation="MNIINKPYIFVLGNEKGGAGKTTCSMHLIIGLLYQNYSVISIDA
DSRQSSLTNYLKNRDLYNQQNPTNTVLVPKHFHIFQSDVEEQINSFKQILKNNKDADY
IVIDTPGSYTALSRIAHSYADTIITPINDSFLDLDVIAKMDSKDEIISPSIYSQMIWE
QKMERASRDGGSIDWIILRNRLSNLDALNKRRVGAVLVALAKRINFKLAEGFSERVIY
RELFLQGLTLLDLKTAKYDRVFNSSHVLARQELRNFLVFLDIKAEV"
misc_feature 513820..514578
/locus_tag="MA5_02055"
/note="ATPase MipZ; Region: MipZ; pfam09140"
/db_xref="CDD:204149"
misc_feature 513823..514242
/locus_tag="MA5_02055"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:73302"
misc_feature 513844..513864
/locus_tag="MA5_02055"
/note="P-loop; other site"
/db_xref="CDD:73302"
misc_feature order(513862..513864,514114..514116)
/locus_tag="MA5_02055"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:73302"
gene 514689..515123
/locus_tag="MA5_02060"
/db_xref="GeneID:12007294"
CDS 514689..515123
/locus_tag="MA5_02060"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404670.1"
/db_xref="GI:383486990"
/db_xref="GeneID:12007294"
/translation="MSNVAENISKLPEEQEKINKLVDQYKNLMPQEQKEVDKKLKLYF
TKDELEQDELKSRMNKIRSNLSQQEQEKLQAGNSTIGEIAKDVLSLVKGIINLVENIS
KVIKNPTGAVYEWFQNELNQVKPQQQNNHQLQSKPKAASISR"
gene 515196..517013
/gene="aspS"
/locus_tag="MA5_02065"
/db_xref="GeneID:12007295"
CDS 515196..517013
/gene="aspS"
/locus_tag="MA5_02065"
/EC_number="6.1.1.12"
/note="COG0173 Aspartyl-tRNA synthetase"
/codon_start=1
/transl_table=11
/product="aspartyl-tRNA synthetase"
/protein_id="YP_005404671.1"
/db_xref="GI:383486991"
/db_xref="GeneID:12007295"
/translation="MHKYRTHNCNELQLSNVGQEVKLSGWVHRRRDHGNLVFIDLRDH
YGITQIVFTDQNQQLMYDASRLCYESVITVSGTVVARSLDTINNKLPTGYVEVLAMEC
IVESASSPLPFVINNEKEAPEESRLKHRFLDLRREKLHNNIILRSQVIAHIRHLMIAR
GFTELQTPILTSSSPEGARDFLVPSRIHPGKFYALPQAPQQFKQLLMVAGFDRYFQIA
PCFRDEDARADRSPGEFYQLDLEMSFVTQEDIFNTIEPVLYDLFTKFTNKTVSNTPFV
RIPYNESMLKYGSDKPDLRNPIIISDVTEVFRDSNFTIFRENIKKGSVVHAIPAPQAA
SLPRSFFDKMIEFAISKGARGLGYIQFSETGEAKGPLSKFLTGQQLEILKATANTSNG
DAVFFVSDKKDEAVKLCGKVRIKLGEELNLLEKDCFKFCWITDFPFYELNEETGKIDF
SHNPFSMPQGGIDALEQAKTTEELLALTAYQYDIVCNGIELSSGAIRNHKPEIMYKAF
SIAGYSAEEVEQRFGAMIKAFRFGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQ
QAEDLLMNAPSYVEEKALKELSIMLSPSSRKIHKKNTNL"
misc_feature 515199..516974
/gene="aspS"
/locus_tag="MA5_02065"
/note="aspartyl-tRNA synthetase; Validated; Region: aspS;
PRK00476"
/db_xref="CDD:179042"
misc_feature 515208..515612
/gene="aspS"
/locus_tag="MA5_02065"
/note="EcAspRS_like_N: N-terminal, anticodon recognition
domain of the type found in Escherichia coli aspartyl-tRNA
synthetase (AspRS), the human mitochondrial (mt) AspRS-2,
the discriminating (D) Thermus thermophilus AspRS-1, and
the nondiscriminating (ND)...; Region: EcAspRS_like_N;
cd04317"
/db_xref="CDD:58587"
misc_feature order(515208..515210,515217..515219,515271..515273,
515325..515327,515511..515513,515517..515522)
/gene="aspS"
/locus_tag="MA5_02065"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:58587"
misc_feature order(515280..515282,515286..515294,515307..515309,
515340..515342,515394..515396,515436..515438,
515454..515456,515481..515483,515529..515531)
/gene="aspS"
/locus_tag="MA5_02065"
/note="anticodon binding site; other site"
/db_xref="CDD:58587"
misc_feature 515622..>516059
/gene="aspS"
/locus_tag="MA5_02065"
/note="Asp tRNA synthetase (aspRS) class II core domain.
Class II assignment is based upon its structure and the
presence of three characteristic sequence motifs. AspRS is
a homodimer, which attaches a specific amino acid to the
3' OH group of ribose of the...; Region: AspRS_core;
cd00777"
/db_xref="CDD:73228"
misc_feature order(515631..515639,515646..515648,515655..515660,
515667..515669,515676..515687,515691..515711,
515730..515732,515739..515753,515763..515774,
515817..515822,515829..515834,515850..515852,
515862..515864,515895..515897,515925..515927,
515940..515942)
/gene="aspS"
/locus_tag="MA5_02065"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:73228"
misc_feature 515697..515711
/gene="aspS"
/locus_tag="MA5_02065"
/note="motif 1; other site"
/db_xref="CDD:73228"
misc_feature order(515721..515729,515787..515789,515793..515795,
515802..515804,515859..515861,515865..515867,
515880..515888,515898..515900,515904..515906)
/gene="aspS"
/locus_tag="MA5_02065"
/note="active site"
/db_xref="CDD:73228"
misc_feature 515856..515867
/gene="aspS"
/locus_tag="MA5_02065"
/note="motif 2; other site"
/db_xref="CDD:73228"
misc_feature 516138..516422
/gene="aspS"
/locus_tag="MA5_02065"
/note="GAD domain; Region: GAD; pfam02938"
/db_xref="CDD:145868"
misc_feature <516477..516896
/gene="aspS"
/locus_tag="MA5_02065"
/note="Class II tRNA amino-acyl synthetase-like catalytic
core domain. Class II amino acyl-tRNA synthetases (aaRS)
share a common fold and generally attach an amino acid to
the 3' OH of ribose of the appropriate tRNA. PheRS is an
exception in that it attaches...; Region:
class_II_aaRS-like_core; cl00268"
/db_xref="CDD:206944"
misc_feature order(516663..516668,516678..516680,516807..516812,
516816..516821,516828..516830)
/gene="aspS"
/locus_tag="MA5_02065"
/note="active site"
/db_xref="CDD:29813"
misc_feature order(516819..516821,516828..516830)
/gene="aspS"
/locus_tag="MA5_02065"
/note="motif 3; other site"
/db_xref="CDD:29813"
gene complement(517583..519355)
/locus_tag="MA5_02070"
/db_xref="GeneID:12007296"
CDS complement(517583..519355)
/locus_tag="MA5_02070"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404672.1"
/db_xref="GI:383486992"
/db_xref="GeneID:12007296"
/translation="MSKEKITRELLLQQELFKALKTHDIAANAKISRICRRIAGSVIA
LARQQSHTTENLYTHYINQAAFNTKDLAKVTTIIKNLFPGDKNKKLREIIDTPLLQNL
VIEGSIERKIELNDPQYNTNYRKFEEIIDPNETKKVIDAMLRDKRVAQQDEFEETGKK
TAGISAGYVANDSTGNTFILKHFYKTHAACKKIQDPKEQDQAITDRRDGVQELIGSTM
YQFLLHDRAPKEGLVNVDEQHPDSLYVRSKFFDNAVTLAEFCGLSGLTRVRINDKNLK
RLEGFEKAIAACHILGDGDYHAGNLMVQNGKTITKIDHGRSFLEFHKDFASMIQSTAE
MFIHPHVCYSYAIKAGNLSFNIDKYSEALNQMINQFDLKHMEAIVDQKLDELKKAGFD
PNKIPLSINIKNFDDLKKYYKTHIKQNIINMQEVAKGAEIVKKFSNVLPSFKNGGWLE
AFANSPIKEPLLYAIENNITIEGKDAQEWAYENNYQIKTAIGLTKETIKEQQWSKDFE
GKWQEREVEIQRDKVEIQLSDPLKSIRIQDKFTAEKLGSLIVNFTKHTTTKNVTDKEV
AKFYDNIMKVLKKSIILPSKMLKL"
gene complement(519461..520171)
/locus_tag="MA5_02075"
/db_xref="GeneID:12007297"
CDS complement(519461..520171)
/locus_tag="MA5_02075"
/note="COG0670 Integral membrane protein, interacts with
FtsH"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404673.1"
/db_xref="GI:383486993"
/db_xref="GeneID:12007297"
/translation="MIDYTKTLTTTSKNKTFDEGLRRYMLKVYNYMALALLLTGVAAI
TTISVEPIYHLMFQTGFGTIIMFAPLGIALYFFMGFGRMNLQTAQILFWVYAGLTGMS
LSYLALIYTGTSIARTFFICSSVFGAMSLYGYSTSRDLTSMGSFFAMGLIGLIIASLV
NLFLKSSSLSFATSLIGIVVFMGLIAWDTQKIKSMYYIAGNDEVGQKLSIMAAFTLYL
DFINLFLYLMRFLGNRRD"
misc_feature complement(519473..520120)
/locus_tag="MA5_02075"
/note="Integral membrane protein, interacts with FtsH
[General function prediction only]; Region: COG0670"
/db_xref="CDD:223742"
misc_feature complement(519476..520114)
/locus_tag="MA5_02075"
/note="Bacterial BAX inhibitor (BI)-1/YccA-like proteins;
Region: BI-1-like_bacterial; cd10432"
/db_xref="CDD:198414"
gene complement(520362..521081)
/locus_tag="MA5_02080"
/db_xref="GeneID:12007298"
CDS complement(520362..521081)
/locus_tag="MA5_02080"
/EC_number="1.3.1.26"
/note="COG0289 Dihydrodipicolinate reductase"
/codon_start=1
/transl_table=11
/product="dihydrodipicolinate reductase"
/protein_id="YP_005404674.1"
/db_xref="GI:383486994"
/db_xref="GeneID:12007298"
/translation="MINIGLSGSTGKMGKTIIEIIDQFKDCQISGKFNSTNNLNDLDN
LCKNSDVIIDFSTPEVSEKLINYALKHNTKLVIGTTGLKDQHFKLLEKAAQTLPVLYS
ANMSIGANLLNYLAKKITKILDEYDVEILEMHHRNKKDSPSGTALMLASTIASAKGFN
IIFNRDNRIKSKKEIGISSLRGGNVHGIHEIFFLGNDEIITLKHEALNKNSFAIGAIK
SAIWIQNKPSALYSMQDIYKV"
misc_feature complement(520368..521081)
/locus_tag="MA5_02080"
/note="dihydrodipicolinate reductase; Provisional; Region:
PRK00048"
/db_xref="CDD:234595"
misc_feature complement(520767..521078)
/locus_tag="MA5_02080"
/note="Dihydrodipicolinate reductase, N-terminus; Region:
DapB_N; pfam01113"
/db_xref="CDD:216304"
misc_feature complement(520374..520760)
/locus_tag="MA5_02080"
/note="Dihydrodipicolinate reductase, C-terminus; Region:
DapB_C; pfam05173"
/db_xref="CDD:218479"
gene complement(521322..521807)
/locus_tag="MA5_02085"
/db_xref="GeneID:12007299"
CDS complement(521322..521807)
/locus_tag="MA5_02085"
/note="COG1853 Conserved protein/domain typically
associated with flavoprotein oxygenases, DIM6/NTAB family"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404675.1"
/db_xref="GI:383486995"
/db_xref="GeneID:12007299"
/translation="MARTITEGQFKDAMSRFPQGVTIITTNCNNELFGFTASSFTSVS
LKPSLILFCLNKNSCSINSFKQSDKFAVSILAENQIDISKHFAKSQPNKFIKIGYKLG
NKTDCPLINDATCHIECNKYASYNAGDHVIFIGEVINTAIKNNVKPLLYFHKSYTRLL
A"
misc_feature complement(521340..521768)
/locus_tag="MA5_02085"
/note="Flavin reductase like domain; Region:
Flavin_Reduct; smart00903"
/db_xref="CDD:197971"
gene complement(521792..522517)
/locus_tag="MA5_02090"
/db_xref="GeneID:12007300"
CDS complement(521792..522517)
/locus_tag="MA5_02090"
/note="COG0834 ABC-type amino acid transport/signal
transduction systems, periplasmic component/domain"
/codon_start=1
/transl_table=11
/product="amino-acid ABC transporter binding protein
(yqiX)"
/protein_id="YP_005404676.1"
/db_xref="GI:383486996"
/db_xref="GeneID:12007300"
/translation="MKFLKIFLLSFLLVSCGKKETEKTLIVGTAADNPPYEFIQDGEI
VGIDIDIIKAISQRLNKKIIIKNFDFNGLLAALISENIDVAIAALSVTPERSEYISFS
DSYAKARFAIIYRTGDNIQNSKDLYNKIVGVQLGSVLEKKAQDLSHKMNIKVHALANH
LMLVEELKAKVIDAIISEEFQGKKLKENNSNLETCTLEEFSSAFAIGMSKHSGLINEI
NDTINSLKKDGTINKIMKKWLGQ"
misc_feature complement(521795..522445)
/locus_tag="MA5_02090"
/note="Bacterial extracellular solute-binding proteins,
family 3; Region: SBP_bac_3; pfam00497"
/db_xref="CDD:215950"
misc_feature complement(521801..522445)
/locus_tag="MA5_02090"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cd00134"
/db_xref="CDD:238078"
misc_feature complement(order(521984..521986,522104..522106,
522233..522235,522308..522310,522419..522421))
/locus_tag="MA5_02090"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:238078"
misc_feature complement(order(522005..522007,522023..522025,
522035..522037))
/locus_tag="MA5_02090"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:238078"
misc_feature complement(521897..521914)
/locus_tag="MA5_02090"
/note="hinge residues; other site"
/db_xref="CDD:238078"
gene complement(522682..524133)
/gene="gatB"
/locus_tag="MA5_02095"
/db_xref="GeneID:12007301"
CDS complement(522682..524133)
/gene="gatB"
/locus_tag="MA5_02095"
/EC_number="6.3.5.-"
/note="COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B
subunit (PET112 homolog)"
/codon_start=1
/transl_table=11
/product="aspartyl/glutamyl-tRNA amidotransferase subunit
B"
/protein_id="YP_005404677.1"
/db_xref="GI:383486997"
/db_xref="GeneID:12007301"
/translation="MEYIEGNTGKWEYVIGLEIHAQISSKSKLFSGSSTLFAASPNSQ
VSYVDAAMPGMLPVLNKHCVYQAIKTGLVLKAKINKYSVFDRKNYFYADLPQGYQISQ
FYYPIVQDGMIEIPTSTGDLKTIRINRLHLEQDAGKSIHDQSPYYSLIDLNRAGIGLM
EIVTEPDISSPEEAAEFVKKLRNLLRYIGSCDGDMEKGSMRCDANISVRRIGEALGTR
CEIKNINSIRNIIKAIEFEAKRQVDLLESGETIIQETRLFNVDSCETKTMRLKEEALD
YRYFPDPDLLPLIIPDELINELKASLPELPDQKIEKYIKKFGLSQYDAGIIVSDEAVA
EYFEKAANECNPKMLTNWLITELFGQLNKASIGIRECKITPSDFAKLIKLIEHDTISG
KIAKTVFEIMFETGKAPDKIVEEKRLVQISDNKILNTVIDEVIAENSKSVKCYKSGKD
KLFGFFVGQVMKKTECKANPTLVNKLLKDKLDS"
misc_feature complement(522691..524115)
/gene="gatB"
/locus_tag="MA5_02095"
/note="aspartyl/glutamyl-tRNA amidotransferase subunit B;
Validated; Region: gatB; PRK05477"
/db_xref="CDD:235489"
misc_feature complement(523294..524100)
/gene="gatB"
/locus_tag="MA5_02095"
/note="GatB/GatE catalytic domain; Region: GatB_N;
pfam02934"
/db_xref="CDD:217294"
misc_feature complement(522691..523128)
/gene="gatB"
/locus_tag="MA5_02095"
/note="GatB domain; Region: GatB_Yqey; smart00845"
/db_xref="CDD:197913"
gene complement(524301..525782)
/gene="gatA"
/locus_tag="MA5_02100"
/db_xref="GeneID:12007302"
CDS complement(524301..525782)
/gene="gatA"
/locus_tag="MA5_02100"
/EC_number="6.3.5.-"
/note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A
subunit and related amidases"
/codon_start=1
/transl_table=11
/product="aspartyl/glutamyl-tRNA amidotransferase subunit
A"
/protein_id="YP_005404678.1"
/db_xref="GI:383486998"
/db_xref="GeneID:12007302"
/translation="MTELNKLTVAESVKGLKNKDFTSKELVNAYIKQIEKYKNLNAYV
TETFDLALKQAEAADQNYGQNKARTLEGIPFAVKDLFCTKGIRTTACSNILKNFIPHY
ESSVTQNIFDKGGVILGKTNMDEFAMGSANITSCFGNVISPWKANDDNSDLVPGGSSG
GSAAAVSAFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAG
IFTRSVLDSSIMLEAMMGFDEKDSTSINAQVPELQSAIGSSMKNMKIGVPLSLGEGGI
IEHDIMKMWHDTIELLKNAGAEIVDITLPHAKYGVAVYYVIAPAEAASNLSRYDGVRY
GLRVECENMTLDEMYEMTRSAGFGEEVKRRIMLGTYVLSSHCMDAYYFKAQKVRRLVA
NDFNNAFAKVNAILLPTAPSAAFKIGKKQNDPTIMYLNDLFTIPASLAGLPCASVPAG
LSARGLPLGMQIIGKQLDEYNVLKVASTIETGVKHIKFEPAGF"
misc_feature complement(524313..525782)
/gene="gatA"
/locus_tag="MA5_02100"
/note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
and related amidases [Translation, ribosomal structure and
biogenesis]; Region: GatA; COG0154"
/db_xref="CDD:223232"
misc_feature complement(524343..525737)
/gene="gatA"
/locus_tag="MA5_02100"
/note="aspartyl/glutamyl-tRNA amidotransferase subunit A;
Reviewed; Region: gatA; PRK00012"
/db_xref="CDD:234572"
gene complement(525785..526087)
/gene="gatC"
/locus_tag="MA5_02105"
/db_xref="GeneID:12007303"
CDS complement(525785..526087)
/gene="gatC"
/locus_tag="MA5_02105"
/EC_number="6.3.5.-"
/note="COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C
subunit"
/codon_start=1
/transl_table=11
/product="aspartyl/glutamyl-tRNA amidotransferase subunit
C"
/protein_id="YP_005404679.1"
/db_xref="GI:383486999"
/db_xref="GeneID:12007303"
/translation="MITKEEAQKIAKLARLKFEKDIVEKFSTQLSTIMNMINILNEID
CKDIEPLTSVSNMNARMREDTVTSSDLSNKLFDNVSGNSAKLAKEVKYFITPKVVE"
misc_feature complement(525788..526087)
/gene="gatC"
/locus_tag="MA5_02105"
/note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit
[Translation, ribosomal structure and biogenesis]; Region:
GatC; COG0721"
/db_xref="CDD:223793"
gene complement(526643..527203)
/gene="frr"
/locus_tag="MA5_02110"
/db_xref="GeneID:12007304"
CDS complement(526643..527203)
/gene="frr"
/locus_tag="MA5_02110"
/note="COG0233 Ribosome recycling factor"
/codon_start=1
/transl_table=11
/product="ribosome recycling factor"
/protein_id="YP_005404680.1"
/db_xref="GI:383487000"
/db_xref="GeneID:12007304"
/translation="MEKDNLKKILQEKMEKAIKVLGNELKGLRTGRASINFLDSVTVE
AYGSKIPLSQVASLSTPDARTINVQVWDKSMVSSVEKGITIANLGLTHATDGQLIRLP
IPSLTEERRKELVKLAHKYGEETKISLRNIRRDGIEELKKLEKDNIIVKDEYHNLSEQ
IQKLTDEYSSKVDSAIKQKEQEIMTV"
misc_feature complement(526646..527203)
/gene="frr"
/locus_tag="MA5_02110"
/note="ribosome recycling factor; Reviewed; Region: frr;
PRK00083"
/db_xref="CDD:178850"
misc_feature complement(526652..527188)
/gene="frr"
/locus_tag="MA5_02110"
/note="Ribosome recycling factor (RRF). Ribosome recycling
factor dissociates the posttermination complex, composed
of the ribosome, deacylated tRNA, and mRNA, after
termination of translation. Thus ribosomes are 'recycled'
and ready for another...; Region: RRF; cd00520"
/db_xref="CDD:238288"
misc_feature complement(order(526886..526897,527105..527116))
/gene="frr"
/locus_tag="MA5_02110"
/note="hinge region; other site"
/db_xref="CDD:238288"
gene complement(527407..528135)
/gene="pyrH"
/locus_tag="MA5_02115"
/db_xref="GeneID:12007305"
CDS complement(527407..528135)
/gene="pyrH"
/locus_tag="MA5_02115"
/EC_number="2.7.4.22"
/note="COG0528 Uridylate kinase"
/codon_start=1
/transl_table=11
/product="uridylate kinase"
/protein_id="YP_005404681.1"
/db_xref="GI:383487001"
/db_xref="GeneID:12007305"
/translation="MVSDINALKYKKVLLKVSGEALMGNKQFGHEYEVIKKIAEDIKE
VIDLGLEVAIVVGGGNIYRGINAALVGMDRASADYIGMLATVMNALTLQNVMESLGIY
TRVLSAIPMMSVCEPYIRRKAKRHMEKKRVVIFAGGTGNPFCTTDSAAVLRAIEMNCD
ILLKATQVDGVYDSDPKKNPNAKKYFTISYKDVINNHLQVMDTAAIAVARENKLPIRV
FSIKEHGNFARVIQDKGQYTTIGE"
misc_feature complement(527413..528105)
/gene="pyrH"
/locus_tag="MA5_02115"
/note="UMP kinase (UMPK)-Ec, the microbial/chloroplast
uridine monophosphate kinase (uridylate kinase) enzyme
that catalyzes UMP phosphorylation and plays a key role in
pyrimidine nucleotide biosynthesis; regulation of this
process is via feed-back control and...; Region:
AAK_UMPK-PyrH-Ec; cd04254"
/db_xref="CDD:58620"
misc_feature complement(order(527611..527616,527620..527622,
527626..527628,527635..527640,527695..527700,
527959..527967,528076..528081,528088..528090))
/gene="pyrH"
/locus_tag="MA5_02115"
/note="putative nucleotide binding site [chemical
binding]; other site"
/db_xref="CDD:58620"
misc_feature complement(order(527698..527706,527710..527715,
527719..527721,527890..527895,527902..527904,
527944..527949,527959..527967))
/gene="pyrH"
/locus_tag="MA5_02115"
/note="uridine monophosphate binding site [chemical
binding]; other site"
/db_xref="CDD:58620"
misc_feature complement(order(527500..527502,527668..527673,
527680..527682,527707..527715,527719..527721,
527743..527745,527761..527763,527770..527772,
527782..527784,527824..527826,527854..527856,
527875..527877,527896..527901,527923..527928))
/gene="pyrH"
/locus_tag="MA5_02115"
/note="homohexameric interface [polypeptide binding];
other site"
/db_xref="CDD:58620"
gene complement(528145..528456)
/locus_tag="MA5_02120"
/db_xref="GeneID:12007306"
CDS complement(528145..528456)
/locus_tag="MA5_02120"
/note="COG1863 Multisubunit Na+/H+ antiporter, MnhE
subunit"
/codon_start=1
/transl_table=11
/product="putative monovalent cation/H+ antiporter subunit
E"
/protein_id="YP_005404682.1"
/db_xref="GI:383487002"
/db_xref="GeneID:12007306"
/translation="MLMFTKIKFILYFLWLLLEIWKSAFLVIKIIWQNKIKIEPIFEW
IDAEGLQEIGTVIYGNSITLTPGTVTLDINNNMLLVHALNKSSITDLKSGKMIKKIKT
A"
misc_feature complement(528148..528456)
/locus_tag="MA5_02120"
/note="putative monovalent cation/H+ antiporter subunit E;
Reviewed; Region: PRK06580"
/db_xref="CDD:180628"
gene complement(528440..529999)
/locus_tag="MA5_02125"
/db_xref="GeneID:12007307"
CDS complement(528440..529999)
/locus_tag="MA5_02125"
/note="COG0477 Permeases of the major facilitator
superfamily"
/codon_start=1
/transl_table=11
/product="multidrug resistance protein B"
/protein_id="YP_005404683.1"
/db_xref="GI:383487003"
/db_xref="GeneID:12007307"
/translation="MPNNDLKTPPLSKKQLLAFFGMIVGMFMSVLDIQIVASSLSVIA
AGLAASSDELSWVQTSYLIAEVIIIPITGFLARLLSTRICYFIAALGFTIMSVLCSLA
NNIESMIIFRALQGFFGGAMIPLVFSTVYIIFPASQRPTVTILIGLVVTVAPTLGPTL
GGYITEILSWHFMFLLNVIPGIFVCTVVFLYVNFDKPNYQLLKNFDFLGILLMSLTLG
LLQYVLEEGNKEGWLDDNLILFLSITVALGFILLIIRELTFINPILDLKTFLYKDFTF
GCIYSFVMGIGLYGAVYILPLFLFTIAEYDTLQIGATMMVTGVAQFLSAPLAGRMLGL
GIDLRMMLTIGLGGFALGCHLNSCLTPDSKFAAFILPQFVRGFSLMFCFIPTNNIALG
NMPKEKVGNASGLYNLTRNLGGAVGLAIISTILSNDTKIFMQYLSENISYTSIIALTR
LDSYTELLSGKILNPEQGSYLLLANKLNNDAFVIAINNIFNMIGLLFVFIMLLIPFTS
NIKLTENVNVH"
misc_feature complement(528479..529954)
/locus_tag="MA5_02125"
/note="drug resistance transporter, EmrB/QacA subfamily;
Region: efflux_EmrB; TIGR00711"
/db_xref="CDD:129794"
misc_feature complement(<529424..529945)
/locus_tag="MA5_02125"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(529538..529540,529556..529561,
529568..529573,529607..529609,529616..529621,
529628..529633,529640..529645,529781..529786,
529790..529795,529805..529807,529814..529819,
529826..529828,529877..529882,529886..529894,
529901..529903))
/locus_tag="MA5_02125"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature complement(528719..>529195)
/locus_tag="MA5_02125"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene 530182..530385
/locus_tag="MA5_02130"
/db_xref="GeneID:12007308"
CDS 530182..530385
/locus_tag="MA5_02130"
/note="COG1104 Cysteine sulfinate desulfinase/cysteine
desulfurase and related enzymes"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404684.1"
/db_xref="GI:383487004"
/db_xref="GeneID:12007308"
/translation="MQNPTQKVISFSEHKADIERIKKEIEEGWAIVKLVPNKDRFIGL
LEKISDPKDETIYIPPRKKIIMN"
misc_feature 530182..530382
/locus_tag="MA5_02130"
/note="Protein of unknown function (DUF2674); Region:
DUF2674; pfam10879"
/db_xref="CDD:151328"
gene complement(531412..531487)
/locus_tag="MA5_t04339"
/db_xref="GeneID:12007309"
tRNA complement(531412..531487)
/locus_tag="MA5_t04339"
/product="tRNA-Thr"
/db_xref="GeneID:12007309"
gene complement(531626..533932)
/locus_tag="MA5_02135"
/db_xref="GeneID:12007310"
CDS complement(531626..533932)
/locus_tag="MA5_02135"
/note="COG4775 Outer membrane protein/protective antigen
OMA87"
/codon_start=1
/transl_table=11
/product="outer membrane protein omp1"
/protein_id="YP_005404685.1"
/db_xref="GI:383487005"
/db_xref="GeneID:12007310"
/translation="MKIISISKLTILLLTIFYYHISFADYVIRKITIEGNHRVERSTI
ESYLKLNVGETYNNSKEDEAIKRLYATSLFRNINMYITNDGNLIVNVTETPFISSVVF
SGNSKIKTNILAKEIYTMSGESLSQAKIELDVKKILEIYKRSGRFSTKVTPKIKSLEN
NRVKVIFDIAEGPKTVIKSIYFSGNEHYSDSELKSIVLTKESRWFRFLESNDTYDPDR
VEYDKELLREFYQSVGFADFRVISASVALNDTKEYFTITYSIEEGEKYRFGNVTIDNK
LTNINIKQLNKIVNIKQGKIFNMKTVDDIAEKIGEYFTVNGYPAVNVYPDIKKNDNHT
ADIKFIIEKADKVYINKINIINNLKTEDHVIRRAFKIEEGDVMNRSYIEKGERNLRNL
DYFEKVSISLAQTKAKDKYDVNVEVDEKSTSSIGFDLGYNTAGGLFGRFSFLERNLVG
TGKLLNAGVQVSKNSTSYYGCITDPHFLDRDLSLSVNAFRNYTGRGASVLNTTDQSYK
LHSIGVKISLGYDMKEDLSHEIDYLIKRDILSAPSPSNSIFLNEQMGKLITSAIGHTI
TYDQTDNKIVPKNGYLVSGTQEFAGVGGDNKYIKHEIECKFYKSFINNKVTLKLSAAG
GDMAGLGGKMVRISDRFNLGDYSLRGFASGGVGPREKNTNEGLGGERYYTFSTELNFP
TPVPEEFNFTGAVFIDLGSVWGVGLNKKQYKTPNGFYNDQSLRASVGFGFIWVTRFAP
IRMDWGFPIKKKQYDDTQNFHLRFSTHL"
misc_feature complement(531632..533857)
/locus_tag="MA5_02135"
/note="outer membrane protein assembly complex, YaeT
protein; Region: OM_YaeT; TIGR03303"
/db_xref="CDD:200260"
misc_feature complement(533654..533857)
/locus_tag="MA5_02135"
/note="Surface antigen variable number repeat; Region:
Surf_Ag_VNR; pfam07244"
/db_xref="CDD:203601"
misc_feature complement(533417..533650)
/locus_tag="MA5_02135"
/note="Surface antigen variable number repeat; Region:
Surf_Ag_VNR; pfam07244"
/db_xref="CDD:203601"
misc_feature complement(533144..533407)
/locus_tag="MA5_02135"
/note="Surface antigen variable number repeat; Region:
Surf_Ag_VNR; pfam07244"
/db_xref="CDD:203601"
misc_feature complement(532907..533137)
/locus_tag="MA5_02135"
/note="Surface antigen variable number repeat; Region:
Surf_Ag_VNR; pfam07244"
/db_xref="CDD:203601"
misc_feature complement(532673..532858)
/locus_tag="MA5_02135"
/note="Surface antigen variable number repeat; Region:
Surf_Ag_VNR; pfam07244"
/db_xref="CDD:203601"
misc_feature complement(531629..532594)
/locus_tag="MA5_02135"
/note="Surface antigen; Region: Bac_surface_Ag; pfam01103"
/db_xref="CDD:144626"
gene complement(534157..535236)
/locus_tag="MA5_02140"
/db_xref="GeneID:12007311"
CDS complement(534157..535236)
/locus_tag="MA5_02140"
/note="COG0750 Predicted membrane-associated Zn-dependent
proteases 1"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404686.1"
/db_xref="GI:383487006"
/db_xref="GeneID:12007311"
/translation="MLSLIGFIITISILVFIHEFGHYCIARYLDVKVEEFSIGFGKEL
IGITDRKGVRWKLCFIPLGGYVKIYGYDSSTRIIDKTKEVNEEVTFYSRSCLARFSIV
AAGPLINYLLAVIIFTSFYCYFGKVEIPPIIGDVVAASPAERAGLKEGDKIVKVNNKY
VKDFVDVQKEILINGFSSSTLTIARKSEEFKVNIRPQEIIISHPEKKKIGKTFRIGII
AKNEPIHTKIGIFGGVLEAINTTIDISTLTLKAISQMILGTRPLDEIGGPISIAQESG
KSMASGAQMYLLFIAMLSINLGLLNLLPIPVLDGGHLIFILYEAITGRLPNPKTRNIL
LQLGAVIILLLIIISISNDIKNLFY"
misc_feature complement(534163..535236)
/locus_tag="MA5_02140"
/note="Predicted membrane-associated Zn-dependent
proteases 1 [Cell envelope biogenesis, outer membrane];
Region: COG0750"
/db_xref="CDD:223821"
misc_feature complement(<534883..535227)
/locus_tag="MA5_02140"
/note="RseP-like Site-2 proteases (S2P), zinc
metalloproteases (MEROPS family M50A), cleave
transmembrane domains of substrate proteins, regulating
intramembrane proteolysis (RIP) of diverse signal
transduction mechanisms. In Escherichia coli, the S2P
homolog...; Region: S2P-M50_PDZ_RseP-like; cd06163"
/db_xref="CDD:100084"
misc_feature complement(order(535171..535173,535180..535185))
/locus_tag="MA5_02140"
/note="active site"
/db_xref="CDD:100084"
misc_feature complement(534649..534882)
/locus_tag="MA5_02140"
/note="PDZ domain of bacterial and plant zinc
metalloprotases, presumably membrane-associated or
integral membrane proteases, which may be involved in
signalling and regulatory mechanisms. May be responsible
for substrate recognition and/or binding, as most PDZ...;
Region: PDZ_metalloprotease; cd00989"
/db_xref="CDD:238489"
misc_feature complement(order(534721..534726,534733..534738,
534865..534867,534871..534882))
/locus_tag="MA5_02140"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:238489"
misc_feature complement(534169..>534378)
/locus_tag="MA5_02140"
/note="Site-2 protease (S2P) class of zinc
metalloproteases (MEROPS family M50) cleaves transmembrane
domains of substrate proteins, regulating intramembrane
proteolysis (RIP) of diverse signal transduction
mechanisms. Members of this family use proteolytic...;
Region: S2P-M50; cl10020"
/db_xref="CDD:245232"
misc_feature complement(534325..534336)
/locus_tag="MA5_02140"
/note="putative substrate binding region [chemical
binding]; other site"
/db_xref="CDD:100078"
gene 535408..535875
/gene="nusB"
/locus_tag="MA5_02145"
/db_xref="GeneID:12007312"
CDS 535408..535875
/gene="nusB"
/locus_tag="MA5_02145"
/note="COG0781 Transcription termination factor"
/codon_start=1
/transl_table=11
/product="transcription antitermination protein NusB"
/protein_id="YP_005404687.1"
/db_xref="GI:383487007"
/db_xref="GeneID:12007312"
/translation="MSTNKINKKSIARIAAVQALYQNILQNNYDMYDIMQNILACYHS
NNSIDLPKNFKISLSISHFKMLVKSVFENINKLDEIIDNHLTNAKDSVHMPILLRALL
RVSICELLFCSTTPAKVVINEYTDIANDLLNEHEIGFVNSILDKIAQENNKIS"
misc_feature 535432..535860
/gene="nusB"
/locus_tag="MA5_02145"
/note="Transcription termination factor NusB (N
protein-Utilization Substance B). NusB plays a key role in
the regulation of ribosomal RNA biosynthesis in eubacteria
by modulating the efficiency of transcriptional
antitermination. NusB along with other Nus...; Region:
Terminator_NusB; cd00619"
/db_xref="CDD:238342"
misc_feature order(535432..535434,535444..535446)
/gene="nusB"
/locus_tag="MA5_02145"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238342"
gene 535872..536555
/locus_tag="MA5_02150"
/db_xref="GeneID:12007313"
CDS 535872..536555
/locus_tag="MA5_02150"
/note="COG0293 23S rRNA methylase"
/codon_start=1
/transl_table=11
/product="cell division protein FtsJ"
/protein_id="YP_005404688.1"
/db_xref="GI:383487008"
/db_xref="GeneID:12007313"
/translation="MTNNLSGYRNKIVRVKTSKKRPISSSNWLRRQLNDPYVAKARLE
GFRSRAAYKLLEIHYKFRLFTPNMKIVDLGAAPGGWSQVASKLIKASDNNLNNKIISI
DLLEIEPIVGVEFLQKDFFEKDTEELIIHNLEGKADIVMSDMASNTIGHKATDHMRTL
LLCEQAFEFALKVLKPSCHFIAKIFRGGAETALLNKVKREFRTVKHFKPVSSRSESTE
IYLVALNKK"
misc_feature 535941..536552
/locus_tag="MA5_02150"
/note="23S rRNA methylase [Translation, ribosomal
structure and biogenesis]; Region: FtsJ; COG0293"
/db_xref="CDD:223370"
misc_feature 536076..536432
/locus_tag="MA5_02150"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(536088..536108,536178..536183,536223..536231,
536298..536300)
/locus_tag="MA5_02150"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(537567..537752)
/locus_tag="MA5_02155"
/db_xref="GeneID:12007314"
CDS complement(537567..537752)
/locus_tag="MA5_02155"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404689.1"
/db_xref="GI:383487009"
/db_xref="GeneID:12007314"
/translation="MLEYIVFSITRLVRSGANTIVEFCTNTIDTISYTTHESIEEPNL
KEKDIEDDLVVVSLIGN"
gene complement(537746..538852)
/locus_tag="MA5_02160"
/db_xref="GeneID:12007315"
CDS complement(537746..538852)
/locus_tag="MA5_02160"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404690.1"
/db_xref="GI:383487010"
/db_xref="GeneID:12007315"
/translation="MEQFEFVNKTEIPTHAINNTAFAHLGVNLAYKTDDTSRYLAAAL
MTDGNHLVGSGFEILAASCDSLNTALYGYKAVAFINKETKTIHIASAGTKADINDIWD
DALITFHYAPNKLKIAQKFVDNIISKIGGIDEAREYTFDTSGHSLGAIIADLTGIELH
SRNLNFNKSVTFDSPGSQEVIKYAINQDLFTGKVITPIEELAKHSEVYNAKPNIINTT
NQHVGQINLVLPKINNEKSKSSEAVGWFKYLYNIAGSAVYKVAEYLNINKMFEGINNH
KLKYFADLQDSAVIPIANWEEQILENNAYTQKLKTIPSTGNDVYLLDTNRITDNEYTS
IIGIDVFHWAYNDLQQSCAMETVEQIGNLIPILC"
misc_feature complement(<538325..538738)
/locus_tag="MA5_02160"
/note="Lipase. Lipases are esterases that can hydrolyze
long-chain acyl-triglycerides into di- and monoglycerides,
glycerol, and free fatty acids at a water/lipid interface.
A typical feature of lipases is 'interfacial activation',
the process of becoming...; Region: Lipase; cl14883"
/db_xref="CDD:209921"
misc_feature complement(538409..538423)
/locus_tag="MA5_02160"
/note="nucleophilic elbow; other site"
/db_xref="CDD:29806"
misc_feature complement(538415..538417)
/locus_tag="MA5_02160"
/note="catalytic triad; other site"
/db_xref="CDD:29806"
gene complement(538952..539392)
/locus_tag="MA5_02165"
/db_xref="GeneID:12007316"
CDS complement(538952..539392)
/locus_tag="MA5_02165"
/note="COG2867 Oligoketide cyclase/lipid transport
protein"
/codon_start=1
/transl_table=11
/product="oligoketide cyclase/lipid transport protein"
/protein_id="YP_005404691.1"
/db_xref="GI:383487011"
/db_xref="GeneID:12007316"
/translation="MLSFQHTKILPYKPKKLFDLVWDIKSYPQFLPWCAAARIISENN
QEVISEVVIQLKGLSEKYNSRVINTITDNGIYLIDTVAISGPFEYLKSTWQFIPHSTG
TELKFFINFKMTSVILDKLIGSYFTIATEKMILAFEKRAKEVIK"
misc_feature complement(538961..539383)
/locus_tag="MA5_02165"
/note="Coenzyme Q-binding protein COQ10p and similar
proteins; Region: COQ10p_like; cd07813"
/db_xref="CDD:176855"
misc_feature complement(order(538982..538984,538991..538999,
539003..539011,539015..539029,539060..539062,
539066..539068,539072..539074,539078..539080,
539105..539107,539111..539113,539117..539122,
539153..539155,539159..539161,539183..539185,
539189..539191,539201..539203,539234..539236,
539240..539242,539246..539248,539252..539254,
539282..539284,539327..539332,539336..539344,
539369..539371,539375..539377,539381..539383))
/locus_tag="MA5_02165"
/note="putative coenzyme Q binding site [chemical
binding]; other site"
/db_xref="CDD:176855"
gene complement(539392..539529)
/locus_tag="MA5_02170"
/db_xref="GeneID:12007317"
CDS complement(539392..539529)
/locus_tag="MA5_02170"
/note="COG5508 Uncharacterized conserved small protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404692.1"
/db_xref="GI:383487012"
/db_xref="GeneID:12007317"
/translation="MDKQKVNNNIVEEENLSKEKEIGGIKGLEPTRYGDWQHKGKVTD
F"
misc_feature complement(539395..>539517)
/locus_tag="MA5_02170"
/note="Uncharacterized conserved small protein [Function
unknown]; Region: COG5508"
/db_xref="CDD:227795"
misc_feature complement(539395..539496)
/locus_tag="MA5_02170"
/note="Protein of unknown function (DUF1674); Region:
DUF1674; pfam07896"
/db_xref="CDD:219626"
gene 539689..540399
/locus_tag="MA5_02175"
/db_xref="GeneID:12007318"
CDS 539689..540399
/locus_tag="MA5_02175"
/note="COG1385 Uncharacterized protein conserved in
bacteria"
/codon_start=1
/transl_table=11
/product="16S ribosomal RNA methyltransferase RsmE"
/protein_id="YP_005404693.1"
/db_xref="GI:383487013"
/db_xref="GeneID:12007318"
/translation="MKYNRIYINSHLAENSKLELARDYVHYVKTVLRLKIHDSLRIFN
GSDGEFLAQITQIGKNNLSVVLKEQLKKAYIESALTLAVAIIKSDKLMLTINMATQLG
ITKIIPLITRRCQFRTVNIERLMKCVIEATEQSERLNPPIIEQAITLKDYLKKNNNLI
LYANEHEKVKHSILHISSLLSKDIAIIIGPEGGFTNDELELLALYNNTQSISLGSNIL
RTETAAISLISQVRLLQC"
misc_feature 539698..540390
/locus_tag="MA5_02175"
/note="16S ribosomal RNA methyltransferase RsmE;
Provisional; Region: PRK11713"
/db_xref="CDD:183286"
misc_feature 539740..540381
/locus_tag="MA5_02175"
/note="RNA methyltransferase; Region: Methyltrans_RNA;
pfam04452"
/db_xref="CDD:203020"
gene complement(540473..540709)
/locus_tag="MA5_02180"
/db_xref="GeneID:12007319"
CDS complement(540473..540709)
/locus_tag="MA5_02180"
/note="COG2155 Uncharacterized conserved protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404694.1"
/db_xref="GI:383487014"
/db_xref="GeneID:12007319"
/translation="MLINTSNNLLITTIHLLSSIGAINWGLVGLFNFNLVTLLFGSFP
IIVTIFYIIIGFCGVYSFLYLAKIFCKPGIKNVK"
misc_feature complement(540491..>540649)
/locus_tag="MA5_02180"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG2155"
/db_xref="CDD:32338"
gene complement(540793..543819)
/locus_tag="MA5_02185"
/db_xref="GeneID:12007320"
CDS complement(540793..543819)
/locus_tag="MA5_02185"
/note="COG0841 Cation/multidrug efflux pump"
/codon_start=1
/transl_table=11
/product="acriflavin resistance protein D"
/protein_id="YP_005404695.1"
/db_xref="GI:383487015"
/db_xref="GeneID:12007320"
/translation="MLLSTICIKRPIFAIVLSLMIVALGGIFFTKLQIRGAPDISVPI
INVEAHYAGADALYMEQEITTRIEKVLKTVKNLDYITSQSSTGSSSITLSFRLSTDIE
LALNDVRSKISDISYMFPQDMKAPSVTKLDTDNFPSLFISIESDQYSDLELTQIVSDN
IQAQLDKLQSVGKSQIYGGREYIMRIEPDFKKLYQYKISLLEIEAAIKEQNKDYPAGM
IKTKSNNFIVTLTGSLSAPEEFGNIILKVQNGCIIKLRDITKISLTSPDEDIIFRYNG
KNSIALGLIKESKANIIDLSNEVTKELERIKASIPKGISISIAYDGAKPLKASIYAVF
KTMFEALILVVLVTYLFLASAKISLIPFVTIPVSLIGTFSIMYAFGFSINVFTLLAMI
LAIGLVVDDAIVMLENIFRYNEMGYKPMEAAMLASKEIGFAIITMTITLAAVFVPIGF
IEGFIGKLFIEFAWTLAFCVLFSGFVAVTLTPMMSSHMVTKHNTNLAKFLVRFHDMLQ
FVQNRYIYYLKLALDNKKKFVIIILSSFIVLIISFKLTKKTFVPQEDDGFLQVFLKGP
EGASLESSIKVVKEAEQILANYKDIFGYLMVIGVGGSENVFGFIPLKDWSARSRSQKT
IKNMLNKQFSKIPGMSVFAMEPRSMISVNATSPIEFTIQTNLEYKDLDKISQQFIDIM
RANPIFLNVNRNLQSAMPTINIEVNRDKAYLYGMDLANIGKTLQYLIAGQQIGAFRMG
NNLYNVILQFNQKDRQDISDLSKILIRTKNNNMLPLESIANIREKISLKSYYHYNNSK
SVTISSDLAPDVKINDAINIINKIAAQLLDPNNTIIEYIGEIKQMKEVDNNILITFVF
SLVFIYLVLAAQFESFTDPLLILLAVPFSITGGVLTLWLAGNSLNMYSNIGLITLIGL
VTKNAIMIVEFANQLRAKGLNVREAIIESSKLRLRPILMTTVAAIVGALPLVFADGAG
AASRNSIGFVIVGGLSIGTIFTIFAIPVIYQTFKKD"
misc_feature complement(540799..543813)
/locus_tag="MA5_02185"
/note="Cation/multidrug efflux pump [Defense mechanisms];
Region: AcrB; COG0841"
/db_xref="CDD:31183"
misc_feature complement(542386..>542856)
/locus_tag="MA5_02185"
/note="Protein export membrane protein; Region: SecD_SecF;
cl14618"
/db_xref="CDD:199094"
gene 544284..544616
/locus_tag="MA5_02190"
/db_xref="GeneID:12007321"
CDS 544284..544616
/locus_tag="MA5_02190"
/note="COG0776 Bacterial nucleoid DNA-binding protein"
/codon_start=1
/transl_table=11
/product="DNA-binding protein HU"
/protein_id="YP_005404696.1"
/db_xref="GI:383487016"
/db_xref="GeneID:12007321"
/translation="MSTHNKQEQKKMNKTEFIAFMTEHGHNNKHAAHKTLTKADAEKA
LNLVIESVISAIKSKHNVNLTGFGSFEIHHRKEREGRNPKTGAKMKIDAYNQPTFRAG
RKLKEACN"
misc_feature 544320..544607
/locus_tag="MA5_02190"
/note="Integration host factor (IHF) and HU are small
heterodimeric members of the DNABII protein family that
bind and bend DNA, functioning as architectural factors in
many cellular processes including transcription,
site-specific recombination, and...; Region: HU_IHF;
cd00591"
/db_xref="CDD:29683"
misc_feature order(544320..544325,544332..544334,544341..544343,
544353..544355,544422..544424,544431..544436,
544443..544448,544458..544472,544479..544484,
544497..544499,544563..544568,544578..544580,
544584..544586,544605..544607)
/locus_tag="MA5_02190"
/note="IHF dimer interface [polypeptide binding]; other
site"
/db_xref="CDD:29683"
misc_feature order(544320..544328,544419..544421,544464..544466,
544470..544472,544476..544481,544488..544490,
544500..544502,544506..544511,544515..544517,
544524..544535,544563..544565,544575..544577,
544581..544583,544590..544592)
/locus_tag="MA5_02190"
/note="IHF - DNA interface [nucleotide binding]; other
site"
/db_xref="CDD:29683"
gene 544745..545536
/locus_tag="MA5_02195"
/db_xref="GeneID:12007322"
CDS 544745..545536
/locus_tag="MA5_02195"
/EC_number="2.7.7.7"
/note="COG0470 ATPase involved in DNA replication"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit delta'"
/protein_id="YP_005404697.1"
/db_xref="GI:383487017"
/db_xref="GeneID:12007322"
/translation="MIIELLEFYLKYNKLYNSWLIEAWNIEQTLQDLKEFIYIKFFNS
NIPLENNPDYYFVARKDSYTSNAKNISIEQIRKLQDFLNKTSAISGYKVAVIYSADLM
NLHAANACLKILEDTPKNSYIFLITSRAASIISTIRSRCFKVNIRSPLPNVSNDLYLQ
FIQPIADNKTLDFINRFTTKDRELWLGFIENLFLLMNRILKKSVNFNIDLLDLENKIF
NKLNKNPAYLLQKFTDIKKLIYNTIDYDLDLKTSYILVVNEFFTV"
misc_feature 544748..545533
/locus_tag="MA5_02195"
/note="DNA polymerase III subunit delta'; Validated;
Region: PRK06581"
/db_xref="CDD:180629"
gene 546204..547553
/locus_tag="MA5_02200"
/db_xref="GeneID:12007323"
CDS 546204..547553
/locus_tag="MA5_02200"
/note="COG0541 Signal recognition particle GTPase"
/codon_start=1
/transl_table=11
/product="signal recognition particle protein"
/protein_id="YP_005404698.1"
/db_xref="GI:383487018"
/db_xref="GeneID:12007323"
/translation="MFKTLTQNLTKIFDKLVNSGILTENQIDTAMRDVRVALLESDVA
LPVIKGFIEEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLASTESTTKLNLNAKPP
VNLLIVGLQGGGKTTASGKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIIANSVNIDS
LPIVKGEKPLDIVKRAIGEAQISAYDVVIYDTAGRIQIDNVMMEEALAIKKILNPTET
LLVIDSMTGQDAVITAKTFSEKLEISGLILSRIDGDTKGGAALSVKYFTQKPIKFLSS
GEKLTDLEEFNAERLASRILDMGDIISFVKKAASIVDREEAEKTAIKLKSGKFDLNDY
LQQMRSIKKMGGFGSILSMLPGSGKIFDQIDQSKLNSKIIEHQEAIILSMTLKERKNP
DIINASRRKRIAAGAGMTVQKVNILLKQYKQISAVMKKTSKMNPKNLLRSGIGKLFS"
misc_feature 546204..547508
/locus_tag="MA5_02200"
/note="signal recognition particle protein; Provisional;
Region: PRK10867"
/db_xref="CDD:236780"
misc_feature 546228..546461
/locus_tag="MA5_02200"
/note="SRP54-type protein, helical bundle domain; Region:
SRP54_N; smart00963"
/db_xref="CDD:214941"
misc_feature 546516..547028
/locus_tag="MA5_02200"
/note="The signal recognition particle (SRP) mediates the
transport to or across the plasma membrane in bacteria and
the endoplasmic reticulum in eukaryotes. SRP recognizes
N-terminal sighnal sequences of newly synthesized
polypeptides at the ribosome. The...; Region: SRP;
cd03115"
/db_xref="CDD:239389"
misc_feature 546528..546551
/locus_tag="MA5_02200"
/note="P loop; other site"
/db_xref="CDD:239389"
misc_feature order(546618..546620,546783..546785,546948..546950,
546957..546962)
/locus_tag="MA5_02200"
/note="GTP binding site [chemical binding]; other site"
/db_xref="CDD:239389"
misc_feature 547185..547487
/locus_tag="MA5_02200"
/note="Signal peptide binding domain; Region: SRP_SPB;
pfam02978"
/db_xref="CDD:202493"
gene complement(547712..549880)
/locus_tag="MA5_02205"
/db_xref="GeneID:12007324"
CDS complement(547712..549880)
/locus_tag="MA5_02205"
/note="COG1505 Serine proteases of the peptidase family
S9A"
/codon_start=1
/transl_table=11
/product="peptidase"
/protein_id="YP_005404699.1"
/db_xref="GI:383487019"
/db_xref="GeneID:12007324"
/translation="MKKIICYFTIILLTFGIDAMEDNNKQIYNPKETKFLEEAAGAEA
LKWAKERTNKTEKALQAMQEYKRIKKEIESIFYDQRKTLYGVIRKGYVYNFWMDDKNP
QGLWRRTLVDNYYKDKPNWEVLIDFDKLSKKIGKKVAYRGVSNCVQNPNRYLISMSFG
GKDEMFFREWDLEKKDFVKNGFEPITSCGKLLEGKFTYPTWVNKDTIIFNPVLYKDEI
TSSLYPNSLYIWKRGEAIEKARKLFEVPKEYIRVSADKLLSDAISSSLIFISADKDFY
NYDNYILDTQDKNFKLQKINMPSDATLQGSFKEYVFWLLRSDWKFKNHNIKAGSLVAL
HFTDLLKAESDKTSLKILFTPTENEVFNFIGTTKDRVFLATYDNVVSKVVTFTLENEQ
WTKPVILKLPYQNAIFRMSSYEDEEEALITIENAIVPPTIYLWVKTHELKVIRKALYS
FDSENYVLEQKEATSFDGVKIPYFIVYKKGIKFDGKNPTLLEAYGGFQVINSPYFSRI
KNEVWVKNGGVSVLANIRGGGEFGPEWHKAAQGIKRQTAFNDFFAVSEELIKQNITSP
EYLGIKGGSNGGLLVSVAMTQRPELFGAIACEVPILDMIRYKEFGAGNSWVTEYGDPE
IPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTY
FLESRDSGHSSGSDLKESANYFINLYTFFANTLKLKLIKF"
misc_feature complement(547733..549799)
/locus_tag="MA5_02205"
/note="Serine proteases of the peptidase family S9A [Amino
acid transport and metabolism]; Region: COG1505"
/db_xref="CDD:31694"
misc_feature complement(547733..548374)
/locus_tag="MA5_02205"
/note="Prolyl oligopeptidase family; Region: Peptidase_S9;
pfam00326"
/db_xref="CDD:201156"
gene 550115..551314
/locus_tag="MA5_02210"
/db_xref="GeneID:12007325"
CDS 550115..551314
/locus_tag="MA5_02210"
/note="COG0635 Coproporphyrinogen III oxidase and related
Fe-S oxidoreductases"
/codon_start=1
/transl_table=11
/product="coproporphyrinogen III oxidase"
/protein_id="YP_005404700.1"
/db_xref="GI:383487020"
/db_xref="GeneID:12007325"
/translation="MSRASKLSIRTKNMRVMANDLSIYIHWPFCLSKCPYCDFNSHVV
STIDYNQWLKSYEKEIEYFKFIIQNKYIKSIFFGGGTPSLMQPLIVEVIINKINNLGI
IDNKTEITLETNPTSFETEKLKAFKSAGINRVSIGVQSLKEDDLKKLGRTHDSMQAIK
TIEAANTIVPRVSFDLIYARNGQTLKDWEKELKQAMYLATSHIALYQLTIEKGTPFYK
LFKNGNLILPTSDEAAEMYEWTNHYLESKKYFRYEISNYARLGHECLHNLTYWNYNSY
LGIGPGAHSRIIENSNSVLAIMMLHNPAQWLDAVSTKNVGIQTHSKLTNKEIIEEILM
MGLRLRKGIKISTLEQRLSTALENILDINNLQHYQNQGLIKLDEHIYLTDKGLMLHNY
IVPRLIR"
misc_feature 550142..551311
/locus_tag="MA5_02210"
/note="coproporphyrinogen III oxidase; Provisional;
Region: PRK06582"
/db_xref="CDD:180630"
misc_feature 550202..550777
/locus_tag="MA5_02210"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature order(550202..550204,550208..550210,550214..550216,
550220..550228,550346..550348,550352..550357,
550448..550456,550523..550525,550643..550645,
550733..550738)
/locus_tag="MA5_02210"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
misc_feature 551081..551278
/locus_tag="MA5_02210"
/note="HemN C-terminal domain; Region: HemN_C; pfam06969"
/db_xref="CDD:203555"
gene complement(552643..553842)
/locus_tag="MA5_02215"
/db_xref="GeneID:12007326"
CDS complement(552643..553842)
/locus_tag="MA5_02215"
/note="COG1301 Na+/H+-dicarboxylate symporters"
/codon_start=1
/transl_table=11
/product="proton/sodium-glutamate symport protein"
/protein_id="YP_005404701.1"
/db_xref="GI:383487021"
/db_xref="GeneID:12007326"
/translation="MKLWQKVTLGLILGIIFGIYLPQYVNYIKPIGDIFLRLIKMIIT
PLIFFSLVSGITSMNDTSALGRVGMKAVAAFLGTTFFATIFGLTIALVLKPGVGIHID
FTSLSTTDRTSFNIIDFFVNIVPENAVRAFANGNVLQVVFFAIFVGITLNKMKSIGKP
ITDLIHAMSKLILKMISFVIKLSPYGAFALTGWIVGMQGFSVMISLSKLVVAVVVAMT
CQYLVFGLLIYIFCRVSPIPFYKKSFEYQILAFSTSSSKATLATTMQVCREKLGISES
STSFVLPIGASINMDGFAINLSLTTIFFAQMMGITLAPHDYLVIILTSTLGSIGGAGI
PGASLIMLPMVLSSVHLPIEGVAIIAGIDRILDMLRTTINITGDATITMIIDNSEDTL
DKKVYLS"
misc_feature complement(552646..553779)
/locus_tag="MA5_02215"
/note="Na+/H+-dicarboxylate symporters [Energy production
and conversion]; Region: GltP; COG1301"
/db_xref="CDD:224220"
misc_feature complement(552679..553779)
/locus_tag="MA5_02215"
/note="Sodium:dicarboxylate symporter family; Region: SDF;
pfam00375"
/db_xref="CDD:215884"
gene complement(553880..554329)
/locus_tag="MA5_02220"
/db_xref="GeneID:12007327"
CDS complement(553880..554329)
/locus_tag="MA5_02220"
/note="COG1324 Uncharacterized protein involved in
tolerance to divalent cations"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404702.1"
/db_xref="GI:383487022"
/db_xref="GeneID:12007327"
/translation="MKHSDTKNNLQEINESVSRSAVHTKIHEHPKIYKDNIENFLSSS
SIKDYCLILTTTNDLQIAEKIASILLELNFAACIQMDNIKSYYRWNNKIIEDNEYRLI
IKTKSYNYNAIEHKILEMHNYALPQIIKINIDYGYQQYLKWIDQNSK"
misc_feature complement(554201..554329)
/locus_tag="MA5_02220"
/note="Rickettsial palindromic element RPE5 domain;
Region: RPE5; TIGR03776"
/db_xref="CDD:163488"
misc_feature complement(553883..554191)
/locus_tag="MA5_02220"
/note="Uncharacterized protein involved in tolerance to
divalent cations [Inorganic ion transport and metabolism];
Region: CutA; COG1324"
/db_xref="CDD:224243"
gene complement(554351..554767)
/locus_tag="MA5_02225"
/db_xref="GeneID:12007328"
CDS complement(554351..554767)
/locus_tag="MA5_02225"
/note="COG0720 6-pyruvoyl-tetrahydropterin synthase"
/codon_start=1
/transl_table=11
/product="6-carboxy-5,6,7,8-tetrahydropterin synthase"
/protein_id="YP_005404703.1"
/db_xref="GI:383487023"
/db_xref="GeneID:12007328"
/translation="MIKCTRRINFDAGHRIIGHKNKCQFLHGHHYVLEITIAANKTDT
LGMVIDFGLIKNLAKKWIDANFDHNLILHQDDKEMGQQIENYTRQKIYYMRNNPTAEN
IATHLKNEIFPKLFVSQNFFVTSLKLYETQNCFVEV"
misc_feature complement(554354..554767)
/locus_tag="MA5_02225"
/note="6-pyruvoyl-tetrahydropterin synthase [Coenzyme
metabolism]; Region: COG0720"
/db_xref="CDD:223792"
misc_feature complement(order(554360..554362,554378..554380,
554681..554683,554687..554689))
/locus_tag="MA5_02225"
/note="active site"
/db_xref="CDD:238351"
gene complement(554935..556140)
/locus_tag="MA5_02230"
/db_xref="GeneID:12007329"
CDS complement(554935..556140)
/locus_tag="MA5_02230"
/EC_number="2.3.1.61"
/note="COG0508 Pyruvate/2-oxoglutarate dehydrogenase
complex, dihydrolipoamide acyltransferase (E2) component,
and related enzymes"
/codon_start=1
/transl_table=11
/product="dihydrolipoamide succinyltransferase"
/protein_id="YP_005404704.1"
/db_xref="GI:383487024"
/db_xref="GeneID:12007329"
/translation="MSVKIIIPSLGESVTEATIAKWYKKLGDSVKTDELLLEIETEKV
TLEVNAPCNGTIEKIAKTDGANVTVGEEIGEINEVVDTDTACTNNNSYKKQAIVQHDS
EQIVDKPASSSNILAPSVQKLVTENKLDPNNIKGTGRGGRITKCDVLETINTTPVTIE
TPALNKTNEERTQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQYKE
EFEKKHTVKLGFMSFFVKATIEALKLIPSINAEIDGDDLLYKNYYDIGVAVGTDQGLV
VPVVRDADKMGFADVEQAIGDLAKKAREGKLSMSDLSGGTFSISNGGVYGSLLSTPII
NPPQSGILGLHKTEERAVVIDGKIEIRPMMYIALSYDHRIIDGKEGVSFLVKIKNLIE
NPEKLLLNL"
misc_feature complement(554938..556140)
/locus_tag="MA5_02230"
/note="dihydrolipoamide succinyltransferase; Validated;
Region: PRK05704"
/db_xref="CDD:235571"
misc_feature complement(555946..556134)
/locus_tag="MA5_02230"
/note="Lipoyl domain of the dihydrolipoyl acyltransferase
component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid
dehydrogenase multienzyme complexes, like pyruvate
dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH)
and branched-chain 2-oxo acid...; Region: lipoyl_domain;
cd06849"
/db_xref="CDD:133458"
misc_feature complement(order(555994..555996,556006..556023,
556042..556044))
/locus_tag="MA5_02230"
/note="E3 interaction surface; other site"
/db_xref="CDD:133458"
misc_feature complement(556012..556014)
/locus_tag="MA5_02230"
/note="lipoyl attachment site [posttranslational
modification]; other site"
/db_xref="CDD:133458"
misc_feature complement(555691..555798)
/locus_tag="MA5_02230"
/note="e3 binding domain; Region: E3_binding; pfam02817"
/db_xref="CDD:202412"
misc_feature complement(554944..555579)
/locus_tag="MA5_02230"
/note="2-oxoacid dehydrogenases acyltransferase (catalytic
domain); Region: 2-oxoacid_dh; pfam00198"
/db_xref="CDD:215782"
gene complement(556165..558975)
/gene="sucA"
/locus_tag="MA5_02235"
/db_xref="GeneID:12007330"
CDS complement(556165..558975)
/gene="sucA"
/locus_tag="MA5_02235"
/EC_number="1.2.4.2"
/note="COG0567 2-oxoglutarate dehydrogenase complex,
dehydrogenase (E1) component, and related enzymes"
/codon_start=1
/transl_table=11
/product="2-oxoglutarate dehydrogenase E1 component"
/protein_id="YP_005404705.1"
/db_xref="GI:383487025"
/db_xref="GeneID:12007330"
/translation="MEEYFNKTGYLFSGNAVFVEELYRQYLANPNSVDQTWQEFFADI
KDNNVVLNKSTAKVISTNVTNKELLNNNLSSETLNNLKAKEMISAYRRNAHYLANLDP
LGLEIRKTKNDLKLNIEAFGLDSSQLGENINIMDEFIGTWNCKLSELVTKLDKVYTSS
IGVEFDQIENVEEKNWLYTKLETDITFTSEEKKSILNDLVEVECFEQFLHIKFPGAKR
FSIEGGDASIVAMNKAIDLSMHQGVEEIVIGMAHRGRLNTLTKVVGKPYKEVIASFIN
GNIFPDGLNVSGDVKYHLGYSADRVRENQKIHLSLADNPSHLEAINSIVAGKVRAKQD
IFVDTKRSKIKAILVHGDAAFCGQGVVAESLSMSPLTAYNVGGILHFVINNQLGFTAN
AADTRASRYSTEFAKIISAPILHVNGDDIEAVLKATDIAVEYRQKFSKDVVVEIICYR
KYGHNEGDEPMYTQSKMYNIIKSKPTPGSIYANELVKNGIIDNNYYAKLKEKFKIRLD
QEYEQAKSYKQETHFFEGYWKGISRIRGKDAITGVNKKILQDLGTKLCEIPKDFAINP
KLIRLFEVRKTTLTTDQPIDWATAEQLAFAHLLCSGINIRLTGQDSARGTFSHRHSIL
HNQIDDTTYIPLNNLSKTQAKYEVANSNLSEYAALGFEYGYSLANPKNLVLWEAQFGD
FANGAQIIFDQFISSSATKWLRMSGLVVLLPHAFEGQGPEHSSARLERFLQLAAEENM
YITYPTTPASIFHLLRRQILESTRKPLIVMSPKSLLRHKYAVSKLDELGENTTFIPIL
DEVTKIDTNNVTKVILCSGKVYYDLFAMRTNNSNIVIIRLEQLYPFEKKLVASLLKKY
NKAQAFIWCQEEPKNMGAWHYIATHLNDALKEAEINNEFKYVGREESASPAVGSLQVH
NKQQEKLLMEALGDDIIKEKLY"
misc_feature complement(556195..558975)
/gene="sucA"
/locus_tag="MA5_02235"
/note="2-oxoglutarate dehydrogenase E1 component;
Reviewed; Region: sucA; PRK09404"
/db_xref="CDD:181824"
misc_feature complement(557572..558363)
/gene="sucA"
/locus_tag="MA5_02235"
/note="Thiamine pyrophosphate (TPP) family, E1 of
OGDC-like subfamily, TPP-binding module; composed of
proteins similar to the E1 component of the 2-oxoglutarate
dehydrogenase multienzyme complex (OGDC). OGDC catalyzes
the oxidative decarboxylation of...; Region:
TPP_E1_OGDC_like; cd02016"
/db_xref="CDD:48179"
misc_feature complement(order(557815..557817,557821..557823,
557914..557925,558022..558024))
/gene="sucA"
/locus_tag="MA5_02235"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:48179"
misc_feature complement(556639..557229)
/gene="sucA"
/locus_tag="MA5_02235"
/note="Transketolase, pyrimidine binding domain; Region:
Transket_pyr; pfam02779"
/db_xref="CDD:202390"
gene complement(559088..560578)
/locus_tag="MA5_02240"
/db_xref="GeneID:12007331"
CDS complement(559088..560578)
/locus_tag="MA5_02240"
/note="COG2317 Zn-dependent carboxypeptidase"
/codon_start=1
/transl_table=11
/product="thermostable carboxypeptidase"
/protein_id="YP_005404706.1"
/db_xref="GI:383487026"
/db_xref="GeneID:12007331"
/translation="MNSNYTELENKFATISHFNNILSILHWDVAVNMPISSSESRTNE
IITLTSFVHSMFKSPILKELISKAKEESKNLNEWQNSNIREIEKKITDANCIDEQLKK
KLVASTTTAELAWRKAIKNNDYNLFKPYLQKVLDYTKEVAKIRASILNSGLYDSLIDM
FDPSRESSEIKQVFSVLKIALPELINKVLEKQKSNKELVKNSALEPEMQKLIGQRIMQ
IMQFDMTKGRLDEATHPFCGGTPHDIRLTTRYNKYNFVSGLMCIMHETGHALYEQNLP
EIYKGQPVGLAKGMAFHESQSLFMEMQIGRSREFTEFLAKLLQDEFALKGEEYSAENL
YRKITRVKPDFIRVEADELTYPMHIILRFEIEEMLINDVLNLDELPKFWDSKMYEYLG
IIPVNFIDGCLQDIHWSHGNFGYFPAYTNGAIIASMIMQKIKKKHKNIKDDILRGDFS
NLNHYLNNNLRNFGSLKNSADLLKSASDEENINPNVYVRYLEEKYL"
misc_feature complement(559091..560578)
/locus_tag="MA5_02240"
/note="Zn-dependent carboxypeptidase [Amino acid transport
and metabolism]; Region: COG2317"
/db_xref="CDD:32471"
misc_feature complement(559091..560548)
/locus_tag="MA5_02240"
/note="Peptidase family M32 includes thermostable
carboxypeptidases TaqCP and PfuCP; Region: M32_Taq;
cd06460"
/db_xref="CDD:188998"
misc_feature complement(order(559322..559324,559331..559333,
559358..559360,559697..559699,559775..559777,
559784..559789))
/locus_tag="MA5_02240"
/note="active site"
/db_xref="CDD:188998"
misc_feature complement(order(559697..559699,559775..559777,
559787..559789))
/locus_tag="MA5_02240"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:188998"
gene complement(560695..562359)
/locus_tag="MA5_02245"
/db_xref="GeneID:12007332"
CDS complement(560695..562359)
/locus_tag="MA5_02245"
/note="COG0497 ATPase involved in DNA repair"
/codon_start=1
/transl_table=11
/product="DNA repair protein RecN"
/protein_id="YP_005404707.1"
/db_xref="GI:383487027"
/db_xref="GeneID:12007332"
/translation="MFYSLSVKNFILIDELEIEFSKGLCVITGETGAGKSILLDAILF
CLGYKTSNNIIKHGKDYTVVNIIFSLNEKIKKFLIQNFIEPEELLLVKCLQKAEGRKS
FFINNQIVTKTLIKQLANYLFELHGQNNNITLLEASTQRDILDSYGDLLEFRVKLAKC
YQIWQNTRKEIEEITVKQNVIEQEIDYLNFVTEELTKLNIQIGEEETLTNIRQDLQNK
NKDLQLIRDIIAQINNPEINISINRAEKLLARQRDNDRFKAIATSLEEAYNNLEVARQ
ELSNLLDSFTYEEYNLEETEERLFLIKAISRKYNVPANELGIFLDKSLEKLVILKNKI
ANSHKLQAQEVLLQEQYYKLANDLSARRLIAAKHLEESLNQELKQLKMEKANFKIEIK
TAIDPTASGNDDIVFKASTNPGMKAEEINKIASGGELSRFMLALKTSLFDKMIKPSII
FDEIDVGIGGEAADKVGDRLKKLSSVTQVIVITHQPQVAGKADLHIKIEKTQLEQETK
IKVKALNLAERQRELARMISGKTITDASLKVAKELLYPVACPHDQK"
misc_feature complement(560713..562359)
/locus_tag="MA5_02245"
/note="ATPase involved in DNA repair [DNA replication,
recombination, and repair]; Region: RecN; COG0497"
/db_xref="CDD:30843"
misc_feature complement(<561892..562350)
/locus_tag="MA5_02245"
/note="RecN ATPase involved in DNA repair; ABC
(ATP-binding cassette) transporter nucleotide-binding
domain; ABC transporters are a large family of proteins
involved in the transport of a wide variety of different
compounds including sugars, ions, peptides, and...;
Region: ABC_RecN; cd03241"
/db_xref="CDD:73000"
misc_feature complement(562252..562275)
/locus_tag="MA5_02245"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73000"
misc_feature complement(order(561949..561951,562249..562257,
562261..562266))
/locus_tag="MA5_02245"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73000"
misc_feature complement(561949..561960)
/locus_tag="MA5_02245"
/note="Q-loop/lid; other site"
/db_xref="CDD:73000"
misc_feature complement(560773..>561162)
/locus_tag="MA5_02245"
/note="RecN ATPase involved in DNA repair; ABC
(ATP-binding cassette) transporter nucleotide-binding
domain; ABC transporters are a large family of proteins
involved in the transport of a wide variety of different
compounds including sugars, ions, peptides, and...;
Region: ABC_RecN; cd03241"
/db_xref="CDD:73000"
misc_feature complement(561061..561090)
/locus_tag="MA5_02245"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73000"
misc_feature complement(561001..561018)
/locus_tag="MA5_02245"
/note="Walker B; other site"
/db_xref="CDD:73000"
misc_feature complement(560983..560994)
/locus_tag="MA5_02245"
/note="D-loop; other site"
/db_xref="CDD:73000"
misc_feature complement(560902..560922)
/locus_tag="MA5_02245"
/note="H-loop/switch region; other site"
/db_xref="CDD:73000"
gene complement(562367..563122)
/locus_tag="MA5_02250"
/db_xref="GeneID:12007333"
CDS complement(562367..563122)
/locus_tag="MA5_02250"
/note="COG4105 DNA uptake lipoprotein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404708.1"
/db_xref="GI:383487028"
/db_xref="GeneID:12007333"
/translation="MKLTKLLSALLVIGLVLGGCKSKKDSNDIVAPIATLYNEGIILL
DKKKYKKAAEEFGKIFYQHPGNEMTPQAELMQAYSLFLAAQYEEAVDILNMFINLHPA
NIDIAYAYYLKALSYYMLISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDSSLKIDL
VNDHLAGKEMMIGRFYLKKKNPMAAINRFEEVIDNYQTTYHSVEALYRLVESYMMLGL
HDEAKKYTSVLSYNYPNSKWYSYAYRLVKNYQN"
misc_feature complement(562370..563065)
/locus_tag="MA5_02250"
/note="DNA uptake lipoprotein [General function prediction
only]; Region: ComL; COG4105"
/db_xref="CDD:33862"
gene complement(563606..564718)
/locus_tag="MA5_02255"
/db_xref="GeneID:12007334"
CDS complement(563606..564718)
/locus_tag="MA5_02255"
/note="COG0484 DnaJ-class molecular chaperone with
C-terminal Zn finger domain"
/codon_start=1
/transl_table=11
/product="chaperone protein DnaJ"
/protein_id="YP_005404709.1"
/db_xref="GI:383487029"
/db_xref="GeneID:12007334"
/translation="MSQDYYQVLGVSKTASQADIKKAYLKLAKQYHPDTTNANDAEKK
FKEINAAYDVLKDEQKRAAYDRFGHDAFQSQQARGGGNNGSFHPDINDIFGDFFSDFM
GSGRRKQTSSKIRGSDLKYDLTIKLEEAFHGIEKNISFSSEVKCDTCHGTGSEKGETI
TTCDACGGVGATRIQQGFFTLEQTCHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSINI
PAGVENGTRIRHTGEGEAGIRGGNNGDLYVDIAIKPHDIYKVDGANLHCKLPISFVHA
ALGGEIEVPVIEGGKVKLTIPAGTQNGDQLRLRSKGMSKVRSTIRGDMLTHIHVEVPK
NLSKKQRELLEEFKKESINEKENDSSFFNKMKSMWS"
misc_feature complement(563609..564718)
/locus_tag="MA5_02255"
/note="chaperone protein DnaJ; Provisional; Region:
PRK14300"
/db_xref="CDD:172788"
misc_feature complement(564548..564709)
/locus_tag="MA5_02255"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of Hsp70s; Region: DnaJ;
cd06257"
/db_xref="CDD:99751"
misc_feature complement(order(564569..564574,564581..564586,
564593..564595,564617..564625))
/locus_tag="MA5_02255"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
misc_feature complement(<564287..564370)
/locus_tag="MA5_02255"
/note="C-terminal substrate binding domain of DnaJ and
HSP40; Region: DnaJ_C; cl03262"
/db_xref="CDD:243362"
misc_feature complement(order(564296..564313,564356..564358))
/locus_tag="MA5_02255"
/note="substrate binding site [polypeptide binding]; other
site"
/db_xref="CDD:199909"
misc_feature complement(564101..564283)
/locus_tag="MA5_02255"
/note="Zinc finger domain of DnaJ and HSP40; Region:
DnaJ_zf; cd10719"
/db_xref="CDD:199908"
misc_feature complement(order(564113..564115,564122..564124,
564155..564157,564164..564166,564221..564223,
564230..564232,564272..564274,564281..564283))
/locus_tag="MA5_02255"
/note="Zn binding sites [ion binding]; other site"
/db_xref="CDD:199908"
misc_feature complement(563711..564100)
/locus_tag="MA5_02255"
/note="C-terminal substrate binding domain of DnaJ and
HSP40; Region: DnaJ_C; cd10747"
/db_xref="CDD:199909"
misc_feature complement(order(563711..563725,563813..563824,
563885..563890,563897..563902))
/locus_tag="MA5_02255"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:199909"
gene complement(564841..566724)
/gene="dnaK"
/locus_tag="MA5_02260"
/db_xref="GeneID:12007335"
CDS complement(564841..566724)
/gene="dnaK"
/locus_tag="MA5_02260"
/note="COG0443 Molecular chaperone"
/codon_start=1
/transl_table=11
/product="molecular chaperone DnaK"
/protein_id="YP_005404710.1"
/db_xref="GI:383487030"
/db_xref="GeneID:12007335"
/translation="MGKVIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTTPSIIAFAN
SERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWV
EADNHKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIA
GLEVLRIINEPTAAALAYGFEKSSSKTIAVYDLGGGTFDVSILEISDGVFEVKSTNGD
TFLGGEDFDTRILNHLIEVFKKESGIDLSKDPLALQRLKEAAEKAKKELSSTSTTDIN
LPYITADSTGPKHLNIKFTRAELEKLVDDLIEKTIEPCRQALKDAGFKPNDIQEVVLV
GGMTRMPKVQEAVKKFFGREPHKGVNPDEVVALGAAIQGGVLNKEVTDILLLDVTPLS
LGIETLGGVFTRLIDRNTTIPSKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKLLGQ
FNLEGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKASGKEQKVTIQASGGLSDAEIEQ
MVKDAEHNADEDKKRKELIETKNAADSLVYSTEKTLREYGDKLSSEEKGTVEEALTSL
KAALESEDASLIKEKTGNLTAANMKIGEAMYKTQTENQHSEANTVNNEKVVDADFQDV
DKK"
misc_feature complement(564844..566724)
/gene="dnaK"
/locus_tag="MA5_02260"
/note="molecular chaperone DnaK; Provisional; Region:
dnaK; PRK00290"
/db_xref="CDD:234715"
misc_feature complement(565597..566724)
/gene="dnaK"
/locus_tag="MA5_02260"
/note="Nucleotide-binding domain of human HSPA9,
Escherichia coli DnaK, and similar proteins; Region:
HSPA9-like_NBD; cd11733"
/db_xref="CDD:212683"
misc_feature complement(order(565708..565710,565714..565722,
565921..565923,565933..565935,565942..565944,
566056..566058,566134..566136,566140..566145,
566215..566217,566518..566520,566686..566697))
/gene="dnaK"
/locus_tag="MA5_02260"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212683"
misc_feature complement(order(565888..565893,565897..565899,
565951..565953,565960..565965,565972..565974,
566332..566343,566548..566553,566557..566562,
566569..566571,566581..566583,566632..566634,
566641..566643))
/gene="dnaK"
/locus_tag="MA5_02260"
/note="NEF interaction site [polypeptide binding]; other
site"
/db_xref="CDD:212683"
misc_feature complement(order(566086..566097,566218..566220,
566224..566229,566272..566277,566281..566286))
/gene="dnaK"
/locus_tag="MA5_02260"
/note="SBD interface [polypeptide binding]; other site"
/db_xref="CDD:212683"
gene complement(566702..566926)
/locus_tag="MA5_02265"
/db_xref="GeneID:12007336"
CDS complement(566702..566926)
/locus_tag="MA5_02265"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_005404711.1"
/db_xref="GI:383487031"
/db_xref="GeneID:12007336"
/translation="MHSMHCSGGTITISVSHRSLSTVFKKTTYNLFLDPGNKSPNKGD
KTGPHWNNIEYNANNKQKENEEYYGKSNRY"
misc_feature 567033..568504
/note="potential frameshift: common BLAST hit:
gi|51473386|ref|YP_067143.1| serine protease"
gene 569415..569888
/locus_tag="MA5_02280"
/db_xref="GeneID:12007337"
CDS 569415..569888
/locus_tag="MA5_02280"
/codon_start=1
