LOCUS NC_009052 5127376 bp DNA circular BCT 27-SEP-2012
DEFINITION Shewanella baltica OS155 chromosome, complete genome.
ACCESSION NC_009052
VERSION NC_009052.1 GI:126172257
DBLINK Project: 58259
BioProject: PRJNA58259
KEYWORDS .
SOURCE Shewanella baltica OS155
ORGANISM Shewanella baltica OS155
Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
Shewanellaceae; Shewanella.
REFERENCE 1 (bases 1 to 5127376)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D.R., Brettin,T., Bruce,D., Han,C., Tapia,R., Brainard,J.,
Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
Mikhailova,N., Brettar,I., Klappenbach,J., Konstantinidis,K.,
Rodrigues,J., Tiedje,J. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of chromosome of Shewanella baltica OS155
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5127376)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5127376)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D.R., Brettin,T., Bruce,D., Han,C., Tapia,R., Brainard,J.,
Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
Mikhailova,N., Brettar,I., Klappenbach,J., Konstantinidis,K.,
Rodrigues,J., Tiedje,J. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000563.
URL -- http://www.jgi.doe.gov
JGI Project ID: 3634605
Source DNA and bacteria available from James Tiedje
(tiedjej@msu.edu)
Contacts: James Tiedje (tiedjej@msu.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..5127376
/organism="Shewanella baltica OS155"
/mol_type="genomic DNA"
/strain="OS155"
/db_xref="taxon:325240"
gene 41..1429
/gene="dnaA"
/locus_tag="Sbal_0001"
/db_xref="GeneID:4845102"
CDS 41..1429
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="binds to the dnaA-box as an ATP-bound complex at
the origin of replication during the initiation of
chromosomal replication; can also affect transcription of
multiple genes including itself."
/codon_start=1
/transl_table=11
/product="chromosomal replication initiation protein"
/protein_id="YP_001048407.1"
/db_xref="GI:126172258"
/db_xref="InterPro:IPR001957"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013159"
/db_xref="InterPro:IPR013317"
/db_xref="GeneID:4845102"
/translation="MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGDTLVLYAPN
RFVLDWVRDKYINIINQFFTEQMGSDAPKLRFDIGSRPSAKKPSVPAPIAPTRVANTQ
TKATVGTTFNVQAEPMANANHRSNINPSYQFDNFVEGKSNQLGKAAALQVAENPGGAY
NPLFLYGGTGLGKTHLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFK
RYYRSVDALFIDDIQFFANKDRSQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDR
LKSRFGWGLTVAIEPPELETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGA
LNRVIANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSK
RRSRSVARPRQVAMALSKELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIK
EDYANLIRTLSS"
misc_feature 41..1426
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="chromosomal replication initiation protein;
Reviewed; Region: dnaA; PRK00149"
/db_xref="CDD:178902"
misc_feature 50..235
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="DnaA N-terminal domain; Region: DnaA_N; pfam11638"
/db_xref="CDD:204696"
misc_feature 464..895
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 539..562
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(542..565,728..730,830..832)
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 716..733
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature <725..1117
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
misc_feature 866..868
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 1151..1420
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="C-terminal domain of bacterial DnaA proteins. The
DNA-binding C-terminal domain of DnaA contains a
helix-turn-helix motif that specifically interacts with
the DnaA box, a 9-mer motif that occurs repetitively in
the replication origin oriC. Multiple...; Region:
Bac_DnaA_C; cd06571"
/db_xref="CDD:119330"
misc_feature order(1220..1222,1244..1249,1268..1270,1286..1294,
1319..1333,1340..1342,1349..1354)
/gene="dnaA"
/locus_tag="Sbal_0001"
/note="DnaA box-binding interface [nucleotide binding];
other site"
/db_xref="CDD:119330"
gene 1449..2549
/locus_tag="Sbal_0002"
/db_xref="GeneID:4845737"
CDS 1449..2549
/locus_tag="Sbal_0002"
/EC_number="2.7.7.7"
/note="KEGG: shm:Shewmr7_0002 DNA polymerase III, beta
subunit;
TIGRFAM: DNA polymerase III, beta subunit;
PFAM: DNA polymerase III, beta chain"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit beta"
/protein_id="YP_001048408.1"
/db_xref="GI:126172259"
/db_xref="InterPro:IPR000169"
/db_xref="InterPro:IPR001001"
/db_xref="GeneID:4845737"
/translation="MKFSIDRDALLKPLQLVCGAVERRHNLPILSNLLVEVSGHSLKL
TGTDLEVELVGQVVVHGDIEEGRTTVPAKKLLDIVKSLPEQSELKVEQQDNKWLLRSG
RSRFSLATLPAEEYPNVEAFQAEIEFSLKQGVLKSIIDSTQFSMANQDVRYYLNGLLF
ETEGNVLRAIATDGHRLALSHRTIEAQLPEKQVIVPRKGVMEMARLLESDDLDIAIAI
GDNAIRATTANTVFTSKLVDGRFPDYRRVLPKGGDKIVIASRNHLKQALTRASILSNE
KFRGVRIQLENGLLKITANNPEQEEAEEIIDVEYNNQALEIGFNVSYLLDVLNNLKSD
DVRITLIDGNSSALIENHLEEDSMYVVMPMRL"
misc_feature 1449..2546
/locus_tag="Sbal_0002"
/note="DNA polymerase III subunit beta; Validated; Region:
PRK05643"
/db_xref="CDD:180180"
misc_feature 1449..2543
/locus_tag="Sbal_0002"
/note="Beta clamp domain. The beta subunit (processivity
factor) of DNA polymerase III holoenzyme, refered to as
the beta clamp, forms a ring shaped dimer that encircles
dsDNA (sliding clamp) in bacteria. The beta-clamp is
structurally similar to the trimeric...; Region:
beta_clamp; cd00140"
/db_xref="CDD:29053"
misc_feature order(1518..1520,1665..1667,1686..1688,2040..2042)
/locus_tag="Sbal_0002"
/note="putative DNA binding surface [nucleotide binding];
other site"
/db_xref="CDD:29053"
misc_feature order(1668..1670,1677..1679,1755..1757,1761..1763,
2262..2264,2355..2360)
/locus_tag="Sbal_0002"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29053"
misc_feature order(1962..1964,1968..1979,2406..2408,2532..2543)
/locus_tag="Sbal_0002"
/note="beta-clamp/clamp loader binding surface; other
site"
/db_xref="CDD:29053"
misc_feature order(1962..1964,1968..1973,2187..2189,2292..2294,
2331..2336,2415..2417,2532..2543)
/locus_tag="Sbal_0002"
/note="beta-clamp/translesion DNA polymerase binding
surface; other site"
/db_xref="CDD:29053"
gene 2751..3833
/gene="recF"
/locus_tag="Sbal_0003"
/db_xref="GeneID:4843454"
CDS 2751..3833
/gene="recF"
/locus_tag="Sbal_0003"
/note="Required for DNA replication; binds preferentially
to single-stranded, linear DNA"
/codon_start=1
/transl_table=11
/product="recombination protein F"
/protein_id="YP_001048409.1"
/db_xref="GI:126172260"
/db_xref="InterPro:IPR001238"
/db_xref="InterPro:IPR003395"
/db_xref="GeneID:4843454"
/translation="MSLTRLNIEAFRNIQSAQLIPAPGINLIYGQNGSGKTSILEAIY
FLGMGRSFRSHLSQRVINNDDDKLTLFATLNLARGDSKIGLRRFRSGETEVRIDGEKV
KRLSTLAETLPIQVITPESFSLLFEGPKSRRQFIDWGAFHADPQFYGAWTNVRRVLKQ
RNQLLRNGSAYSNIQFWDQEFVRYAEQVTEIRNHYVDSLNELLKGIIGEFLPSVDVKV
SFTRGWDSKTDFAELLENQYSRDLATGHTVSGPHKADLRLRVGTLPAQDALSRGQLKL
LVCALRIAQGKLLKQQIDKHSIYLVDDLPSELDAQHRQLLLKQLTDTGAQVFVTAIDP
AAIVDSLHTPPSRMFHVEQGRVTVIE"
misc_feature 2751..3821
/gene="recF"
/locus_tag="Sbal_0003"
/note="recombination protein F; Reviewed; Region: recF;
PRK00064"
/db_xref="CDD:178835"
misc_feature 2757..>3248
/gene="recF"
/locus_tag="Sbal_0003"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 2838..2861
/gene="recF"
/locus_tag="Sbal_0003"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(2847..2852,2856..2864,3105..3107)
/gene="recF"
/locus_tag="Sbal_0003"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 3096..3107
/gene="recF"
/locus_tag="Sbal_0003"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature <3456..3821
/gene="recF"
/locus_tag="Sbal_0003"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 3555..3584
/gene="recF"
/locus_tag="Sbal_0003"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 3642..3659
/gene="recF"
/locus_tag="Sbal_0003"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 3666..3677
/gene="recF"
/locus_tag="Sbal_0003"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 3735..3755
/gene="recF"
/locus_tag="Sbal_0003"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 3850..6267
/locus_tag="Sbal_0004"
/db_xref="GeneID:4844777"
CDS 3850..6267
/locus_tag="Sbal_0004"
/EC_number="5.99.1.3"
/note="KEGG: son:SO0011 DNA gyrase subunit B;
TIGRFAM: DNA gyrase, B subunit;
PFAM: DNA gyrase, subunit B domain protein; ATP-binding
region, ATPase domain protein domain protein; TOPRIM
domain protein; DNA topoisomerase, type IIA, subunit B,
region 2 domain protein;
SMART: DNA topoisomerase II"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit B"
/protein_id="YP_001048410.1"
/db_xref="GI:126172261"
/db_xref="InterPro:IPR000565"
/db_xref="InterPro:IPR001241"
/db_xref="InterPro:IPR002288"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR006171"
/db_xref="InterPro:IPR011557"
/db_xref="InterPro:IPR011558"
/db_xref="InterPro:IPR013506"
/db_xref="GeneID:4844777"
/translation="MSENSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEV
VDNSIDEALAGHCSDITITIHVDGSVSVKDDGRGIPVSIHEEEGVSAAEVIMTVLHAG
GKFDDNSYKVSGGLHGVGVSVVNALSKKLQMTIRRAGKVYEQFYTHGVPDAPIKEIGD
ATKTGTEIRFWPSEDTFSDVEFHFEILAKRVRELSFLNSGVGIRLIDERDNKNEFFKY
EGGISAFVDYLNRNKTPVNKDVFHFMQEREDGITVEVAMQWNDGYQENIFCFTNNIPQ
RDGGTHLVGFRSALTRNLNSYMENEGYNKKGKTSATGDDAREGLTAVISVKVPDPKFS
SQTKDKLVSSEVKTAVEQTMGEKLNDYLLENPADAKLIVGKIVDAARAREAARKAREM
TRRKGALDLGGLPGKLADCQEKDPGLSEIYIVEGDSAGGSAKQGRNRKNQAILPLKGK
ILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKTRYHNIIIMTDADVDGSHIR
TLLLTFFFRQMPELIERGYVYIAQPPLFKVKKGKQEQYLKDEPALTQYLTTQALDGTI
VYPTQGAIGMSGEPLERLVTQYREVEAIVARLEQRYPTHITNRMLYHPMITNDMLADE
GKMKEWIDAFIHELVEMESSGVLYSAEPILDPERKVYLPKITIRKHGIDTNYLFTYDF
FQSSDYQRIGKLGAALDGMIEEGGYVQRGERVKEVGSFLEALDWTISEAKRGLYIQRY
KGLGEMNPEQLWETTMDPESRRMLQVTIDDAVGADQLFTCLMGDQVEPRREFIEANAL
NVANLDV"
misc_feature 3850..6264
/locus_tag="Sbal_0004"
/note="DNA gyrase subunit B; Provisional; Region: gyrB;
PRK14939"
/db_xref="CDD:184903"
misc_feature 3958..>4107
/locus_tag="Sbal_0004"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature 3988..3990
/locus_tag="Sbal_0004"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(4075..4077,4081..4083)
/locus_tag="Sbal_0004"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 4507..4983
/locus_tag="Sbal_0004"
/note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
a ribosomal S5 domain 2-like fold, of the type found in
proteins of the type IIA family of DNA topoisomerases
similar to the B subunits of E. coli DNA gyrase and E.
coli Topoisomerase IV which are; Region:
TopoII_Trans_DNA_gyrase; cd00822"
/db_xref="CDD:48467"
misc_feature 4663..4665
/locus_tag="Sbal_0004"
/note="anchoring element; other site"
/db_xref="CDD:48467"
misc_feature order(4837..4839,4846..4851,4855..4857)
/locus_tag="Sbal_0004"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48467"
misc_feature order(4855..4857,4861..4863)
/locus_tag="Sbal_0004"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:48467"
misc_feature 5104..5448
/locus_tag="Sbal_0004"
/note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in proteins of the type IIA family of DNA topoisomerases
similar to the Escherichia coli GyrB subunit. TopoIIA
enzymes cut both strands of the...; Region:
TOPRIM_TopoIIA_GyrB; cd03366"
/db_xref="CDD:173786"
misc_feature order(5122..5127,5134..5136,5344..5346,5350..5352,
5356..5358)
/locus_tag="Sbal_0004"
/note="active site"
/db_xref="CDD:173786"
misc_feature order(5122..5124,5344..5346)
/locus_tag="Sbal_0004"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173786"
misc_feature 6037..6231
/locus_tag="Sbal_0004"
/note="DNA gyrase B subunit, carboxyl terminus; Region:
DNA_gyraseB_C; pfam00986"
/db_xref="CDD:201537"
gene complement(6353..7015)
/locus_tag="Sbal_0005"
/db_xref="GeneID:4845147"
CDS complement(6353..7015)
/locus_tag="Sbal_0005"
/note="PFAM: Glutathione S-transferase, N-terminal domain;
KEGG: son:SO0012 glutathione S-transferase family protein"
/codon_start=1
/transl_table=11
/product="glutathione S-transferase domain-containing
protein"
/protein_id="YP_001048411.1"
/db_xref="GI:126172262"
/db_xref="InterPro:IPR004045"
/db_xref="GeneID:4845147"
/translation="MDLYIGNKNYSSWSLRAWLMAAKSGVQFNEVLLQLDTDSFYQQL
KAISPTLKVPTLVDGNITVWDSLSICEYLNDTYLAGSAWPQDPKQKAKARSIASEMHS
GFNAVRNALPMNIRASRYVELTDAVRKDIERIDAIWSAQMAEFAPSHAEGTWLFGQWS
IADMMFAPVVMRFLTYGVEVSQASSAYMQHVISCPEMQAWMSAAKAETEIVAADEAGI
DR"
misc_feature complement(6794..7012)
/locus_tag="Sbal_0005"
/note="GST_N family, unknown subfamily 1; composed of
uncharacterized proteins, predominantly from bacteria,
with similarity to GSTs. GSTs are cytosolic dimeric
proteins involved in cellular detoxification by catalyzing
the conjugation of glutathione (GSH) with...; Region:
GST_N_1; cd03043"
/db_xref="CDD:48592"
misc_feature complement(6389..6991)
/locus_tag="Sbal_0005"
/note="Glutathione S-transferase [Posttranslational
modification, protein turnover, chaperones]; Region: Gst;
COG0625"
/db_xref="CDD:30970"
misc_feature complement(order(6803..6808,6815..6817,6947..6952,
6959..6964,6968..6973,6977..6979))
/locus_tag="Sbal_0005"
/note="putative C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:48592"
misc_feature complement(order(6818..6823,6854..6862,6977..6979))
/locus_tag="Sbal_0005"
/note="putative GSH binding site (G-site) [chemical
binding]; other site"
/db_xref="CDD:48592"
misc_feature complement(order(6803..6805,6812..6817,6821..6826,
6860..6862))
/locus_tag="Sbal_0005"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:48592"
misc_feature complement(6407..6757)
/locus_tag="Sbal_0005"
/note="C-terminal, alpha helical domain of an unknown
subfamily 3 of Glutathione S-transferases; Region:
GST_C_3; cd03194"
/db_xref="CDD:198303"
misc_feature complement(order(6500..6502,6512..6514,6521..6526,
6533..6535,6725..6727,6746..6748))
/locus_tag="Sbal_0005"
/note="putative N-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:198303"
misc_feature complement(order(6617..6619,6722..6724,6731..6736,
6743..6748))
/locus_tag="Sbal_0005"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:198303"
misc_feature complement(order(6500..6502,6509..6511,6698..6703,
6710..6715,6725..6727))
/locus_tag="Sbal_0005"
/note="putative substrate binding pocket (H-site)
[chemical binding]; other site"
/db_xref="CDD:198303"
gene 7256..7558
/locus_tag="Sbal_0006"
/db_xref="GeneID:4845106"
CDS 7256..7558
/locus_tag="Sbal_0006"
/note="KEGG: son:SO0714 monoheme cytochrome c"
/codon_start=1
/transl_table=11
/product="monoheme cytochrome c"
/protein_id="YP_001048412.1"
/db_xref="GI:126172263"
/db_xref="InterPro:IPR008169"
/db_xref="InterPro:IPR009056"
/db_xref="GeneID:4845106"
/translation="MWLRVIYPASVLIFMLPAVVNADEANKLLNMCKACHGESGMSRF
EHIPNIGWQNSDYLLKQLRAFKTGNRQDPTMTKVAQLLSEADMQQMADYFYLGKDK"
misc_feature <7346..>7537
/locus_tag="Sbal_0006"
/note="Cytochrome c; Region: Cytochrom_C; cl11414"
/db_xref="CDD:212313"
gene 7560..8786
/locus_tag="Sbal_0007"
/db_xref="GeneID:4842223"
CDS 7560..8786
/locus_tag="Sbal_0007"
/note="PFAM: oxidoreductase, molybdopterin binding; Mo-co
oxidoreductase dimerisation domain;
KEGG: son:SO0715 oxidoreductase, molybdopterin-binding"
/codon_start=1
/transl_table=11
/product="oxidoreductase, molybdopterin binding"
/protein_id="YP_001048413.1"
/db_xref="GI:126172264"
/db_xref="InterPro:IPR000572"
/db_xref="InterPro:IPR005066"
/db_xref="InterPro:IPR008335"
/db_xref="GeneID:4842223"
/translation="MDLNRRVFIKGAVATSVLSALPVKWVFADQLPAAVTPLDISALT
WTKAEDLPSYFKVLNTHPLNAFPPEHKLAPAVTPADASFIRWNGIVPDFKALDAKTWT
FKVDGESVATPKTYTIDELKRRFKHYTLQLLIECGGNSRSGFFPSTKGNQWNNAGVFC
SEWTGVLVSDVLKDCGIKADAIYTGHHGVDRHLSGKGEAISRGVPIKAALEELGLIAW
SMNGEDIPYLHGYPLRIVFGGRPGSVSQKAATGISVRNKVHDGHKMEAPAYQLPKYPI
APGESVDNKDYRIIEEMIVKSLITEPQSGTELAVGQKMVIAGHAWAGLREVVKVEVSY
DYGTSWFTAELEKPKNVAAWQQWKIELQLPSQGYYEIWAKATDNQGDSQPVVQPQWNP
KGYMFNGCHRIVVRVV"
misc_feature 7725..8780
/locus_tag="Sbal_0007"
/note="sulfite oxidase; Provisional; Region: PLN00177"
/db_xref="CDD:177772"
misc_feature 7806..8774
/locus_tag="Sbal_0007"
/note="Subgroup of sulfite oxidase (SO) family
molybdopterin binding domains that contains conserved
dimerization domain. This molybdopterin cofactor (Moco)
binding domain is found in a variety of oxidoreductases,
main members of this family are nitrate...; Region:
SO_family_Moco_dimer; cd02110"
/db_xref="CDD:29405"
misc_feature order(7806..7808,7812..7814,7818..7820,7965..7967,
8157..8159,8244..8246,8259..8261,8283..8285,8292..8294,
8298..8303)
/locus_tag="Sbal_0007"
/note="Moco binding site; other site"
/db_xref="CDD:29405"
misc_feature 7965..7967
/locus_tag="Sbal_0007"
/note="metal coordination site [ion binding]; other site"
/db_xref="CDD:29405"
misc_feature order(8439..8441,8532..8534,8544..8546,8550..8552,
8577..8579,8583..8585,8679..8681,8694..8702,8712..8714,
8757..8759)
/locus_tag="Sbal_0007"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29405"
gene 8786..9169
/locus_tag="Sbal_0008"
/db_xref="GeneID:4843301"
CDS 8786..9169
/locus_tag="Sbal_0008"
/note="KEGG: son:SO0716 monoheme cytochrome c, putative"
/codon_start=1
/transl_table=11
/product="monoheme cytochrome c"
/protein_id="YP_001048414.1"
/db_xref="GI:126172265"
/db_xref="GeneID:4843301"
/translation="MRVLNKLFIFLGLVASSISLAAEYPVDPKSGLIMAPGWELVNYQ
CNACHTSMIVVQNHGDKAFWKETLQWMVDTQGLWDLSDTWEPTLSYLSTYYGQAEMDM
TLFRRLPLEPSLPPALVNSVSKETK"
gene 9166..9501
/locus_tag="Sbal_0009"
/db_xref="GeneID:4842230"
CDS 9166..9501
/locus_tag="Sbal_0009"
/note="KEGG: son:SO0717 monoheme cytochrome c"
/codon_start=1
/transl_table=11
/product="monoheme cytochrome c"
/protein_id="YP_001048415.1"
/db_xref="GI:126172266"
/db_xref="InterPro:IPR008169"
/db_xref="InterPro:IPR009056"
/db_xref="GeneID:4842230"
/translation="MKALIISLIALCGLSTEVFGEVYQADSERGQALATAQCESCHGN
AVIAMAKQFPNLKGQKFAYLNKQLVDFKAGLRLDPLMQAQVSALSSEQLQDVALFYSQ
QVTPNLSAN"
misc_feature 9187..9483
/locus_tag="Sbal_0009"
/note="Cytochrome c553 [Energy production and conversion];
Region: COG2863"
/db_xref="CDD:32690"
gene complement(9592..10512)
/locus_tag="Sbal_0010"
/db_xref="GeneID:4842231"
CDS complement(9592..10512)
/locus_tag="Sbal_0010"
/note="TIGRFAM: urea amidolyase related protein;
PFAM: Allophanate hydrolase subunit 2;
KEGG: saz:Sama_0022 UreA carboxylase"
/codon_start=1
/transl_table=11
/product="urea amidolyase-like protein"
/protein_id="YP_001048416.1"
/db_xref="GI:126172267"
/db_xref="InterPro:IPR003778"
/db_xref="GeneID:4842231"
/translation="MIEVIKAGALTTVQDLGRMGYRHLGVTQAGALDRPALCLANRLL
SNPDNTPVLELTFGQSIFLFKRDAWIALTGADFDARIDNKPIVCGWRYSIKAGQKLSL
RGGNKGMRAYIAVDGGVKVPLVMNSAATDLTSGIGGFHGRALEAGDRLTLGSAHPLRR
QVGAIQKSWDGHIRALATKHTQAFSLKSQQTFWQTQWQLSAESDRASAILKGDTLTLA
KPFPVQSHTVTPGVVQVSASGQPLVLLADAQTTSSHPQIAVIIEADLWKLAQTRPGQT
VKFELVDDEQAATAQAEWHDYFYRLQRSLG"
misc_feature complement(9652..10446)
/locus_tag="Sbal_0010"
/note="Allophanate hydrolase subunit 2; Region: AHS2;
pfam02626"
/db_xref="CDD:145662"
gene 10846..11886
/locus_tag="Sbal_0011"
/db_xref="GeneID:4845286"
CDS 10846..11886
/locus_tag="Sbal_0011"
/note="PFAM: HDOD;
KEGG: shn:Shewana3_0015 putative signal transduction
protein"
/codon_start=1
/transl_table=11
/product="putative signal transduction protein"
/protein_id="YP_001048417.1"
/db_xref="GI:126172268"
/db_xref="InterPro:IPR013976"
/db_xref="GeneID:4845286"
/translation="MIKSLFNKLFNIRDTATVERPKSFSTTDLGKSLEPARKPAKPLE
DISVVSVDLAALFYSLSFPTRVKDTGGVANNLERRVMAEIEQALASPQVIAEKVLKLP
SKVLELDRKLADPQFDIKDLLALIERDPLLSIEVLKLCNSPAFKRSDRDITSLQQALV
QLGREQLRKFVTTCLVREMLDIKPIYFRRFGAEIWRHSMQVAFLASELSDEDQDTAFL
LGLLHDVGKLAIFKMLLDAFVQAEPGEQPNSGLFRQVMTTKSLTLSSLLAKHWQLPNT
FETELDKLASVNSRPQAGLAAVIWRANVISEISMLHQAGQLSPEILANLLQQVNLDQT
QFDGLHQKLTQF"
misc_feature 11146..11667
/locus_tag="Sbal_0011"
/note="HDOD domain; Region: HDOD; pfam08668"
/db_xref="CDD:204019"
misc_feature 11428..>11535
/locus_tag="Sbal_0011"
/note="Metal dependent phosphohydrolases with conserved
'HD' motif; Region: HDc; cd00077"
/db_xref="CDD:28958"
misc_feature order(11434..11436,11512..11517)
/locus_tag="Sbal_0011"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:28958"
misc_feature 11515..11517
/locus_tag="Sbal_0011"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28958"
gene complement(11974..14043)
/gene="glyS"
/locus_tag="Sbal_0012"
/db_xref="GeneID:4842061"
CDS complement(11974..14043)
/gene="glyS"
/locus_tag="Sbal_0012"
/EC_number="6.1.1.14"
/note="glycine--tRNA ligase beta chain; glyS; class II
aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2);
catalyzes a two-step reaction; first charging a glycine
molecule by linking the carboxyl group to the
alpha-phosphate of ATP; second by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="glycyl-tRNA synthetase subunit beta"
/protein_id="YP_001048418.1"
/db_xref="GI:126172269"
/db_xref="InterPro:IPR002311"
/db_xref="InterPro:IPR006194"
/db_xref="InterPro:IPR008909"
/db_xref="GeneID:4842061"
/translation="MNFENLLIELGTEELPPKSLRKLAESFLANLTEELTKADLAFSS
AVWYAAPRRLAINVTELALAQADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITV
EQAERLVTDKGEWLVHNAKVEGVETKNLIAAMAQRALDKLPIPKPMRWGNNKTQFIRP
VHTATMLLGSELIEGELLGIKSARTVRGHRFMGLKQFELAHADHYLTDLKEKGKVIAD
YESRKALIKADAEKAAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEA
LVYTMKGDQKYFPVFDDAGKLLPNFIFVTNIESKDPAQIISGNEKVVRPRLADAEFFF
NTDKKHTLESRLPSLETVLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARAGLL
SKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPRFSGDTVPSAGVSC
AVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLITKAQ
ALHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINA
VSHFRSLEASSALAAANKRVSNILAKVEGALPTTINASLLTEAAEQALAAKLNELQPL
LAPLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHV
ADISLLQ"
misc_feature complement(11977..14031)
/gene="glyS"
/locus_tag="Sbal_0012"
/note="glycyl-tRNA synthetase subunit beta; Validated;
Region: glyS; PRK01233"
/db_xref="CDD:179258"
gene complement(14054..14959)
/gene="glyQ"
/locus_tag="Sbal_0013"
/db_xref="GeneID:4843423"
CDS complement(14054..14959)
/gene="glyQ"
/locus_tag="Sbal_0013"
/EC_number="6.1.1.14"
/note="glycine--tRNA ligase alpha chain; GlyRS; class II
aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2);
catalyzes a two-step reaction; first charging a glycine
molecule by linking its carboxyl group to the
alpha-phosphate of ATP; second by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="glycyl-tRNA synthetase subunit alpha"
/protein_id="YP_001048419.1"
/db_xref="GI:126172270"
/db_xref="InterPro:IPR002310"
/db_xref="InterPro:IPR006194"
/db_xref="GeneID:4843423"
/translation="MTTKHDVKTFQGFILTLQEYWAQQGCAIVQPLDMEVGAGTFHPQ
TFLRSLGPEPMSSAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPSPDNIQELYLGS
LQALGIDTQIHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECSPV
TGEITYGLERLAMYIQGVDSVYDLVWTDGPLGRITYGDVFHQNEVEQSTYNFEHADVD
FMFTLFDQCEKMCQHLLSLEKPLPLPAYEQVMKASHAFNLLDARHAISVTERQRYILR
VRTMAKAVAESYYQAREALGFPMCK"
misc_feature complement(14081..14935)
/gene="glyQ"
/locus_tag="Sbal_0013"
/note="Class II Glycyl-tRNA synthetase (GlyRS) alpha
subunit core catalytic domain. GlyRS functions as a
homodimer in eukaryotes, archaea and some bacteria and as
a heterotetramer in the remainder of prokaryotes and in
arabidopsis. It is responsible for the...; Region:
GlyRS_alpha_core; cd00733"
/db_xref="CDD:29812"
misc_feature complement(order(14207..14209,14219..14221,14228..14239,
14249..14251,14261..14263,14270..14272,14279..14284,
14291..14296,14303..14305,14312..14314,14318..14320,
14339..14344,14351..14353,14402..14404,14720..14722,
14768..14770,14780..14782,14807..14809,14855..14866,
14870..14872,14876..14881,14903..14905,14915..14917,
14927..14929))
/gene="glyQ"
/locus_tag="Sbal_0013"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29812"
misc_feature complement(14861..14884)
/gene="glyQ"
/locus_tag="Sbal_0013"
/note="motif 1; other site"
/db_xref="CDD:29812"
misc_feature complement(order(14450..14455,14459..14464,14468..14473,
14519..14521,14531..14536,14699..14707,14711..14713,
14717..14719,14765..14767,14840..14842,14846..14848))
/gene="glyQ"
/locus_tag="Sbal_0013"
/note="active site"
/db_xref="CDD:29812"
misc_feature complement(14759..14770)
/gene="glyQ"
/locus_tag="Sbal_0013"
/note="motif 2; other site"
/db_xref="CDD:29812"
misc_feature complement(14450..14461)
/gene="glyQ"
/locus_tag="Sbal_0013"
/note="motif 3; other site"
/db_xref="CDD:29812"
gene 15077..15691
/locus_tag="Sbal_0014"
/db_xref="GeneID:4842746"
CDS 15077..15691
/locus_tag="Sbal_0014"
/EC_number="3.2.2.20"
/note="KEGG: shn:Shewana3_0018 DNA-3-methyladenine
glycosylase I;
TIGRFAM: DNA-3-methyladenine glycosylase I;
PFAM: methyladenine glycosylase"
/codon_start=1
/transl_table=11
/product="DNA-3-methyladenine glycosylase I"
/protein_id="YP_001048420.1"
/db_xref="GI:126172271"
/db_xref="InterPro:IPR004597"
/db_xref="InterPro:IPR005019"
/db_xref="GeneID:4842746"
/translation="MEEIRCGWVSDDPLYREYHDKVWGRPVYDPKELFAKLCLDGQQA
GLSWITILKKQQNYEQAFANFEPEVIAGFDEAKVEELMLNPGIVRNRLKVNSIIKNAK
GYLVYTADGKDFSAFLWSFVGGKPIVNQFTAMSQVPAQTPESEAMSKALKKLGFNFVG
STICYAFMQAVGMVNDHLVECISYQACVDSCAGQHHREHQYSSC"
misc_feature 15098..15631
/locus_tag="Sbal_0014"
/note="Methyladenine glycosylase; Region: Adenine_glyco;
pfam03352"
/db_xref="CDD:190612"
gene complement(15877..17673)
/locus_tag="Sbal_0015"
/db_xref="GeneID:4844474"
CDS complement(15877..17673)
/locus_tag="Sbal_0015"
/note="PFAM: amidohydrolase;
KEGG: shn:Shewana3_0019 amidohydrolase"
/codon_start=1
/transl_table=11
/product="amidohydrolase"
/protein_id="YP_001048421.1"
/db_xref="GI:126172272"
/db_xref="InterPro:IPR006680"
/db_xref="InterPro:IPR011550"
/db_xref="GeneID:4844474"
/translation="MVYRKTQGGNLTPRTWSQEPGLYKVDIKGKQNKKISADGYQAQF
GANADRVFFMNSSEDETPQLSSINLDGFDKRVHYSSKHATEFRVSPDGEQLAFAERFK
VWVTPFAKHGETVEIGPNANNLPVSQLSVRAGESISWNSKSNQLYWTLGPELYQAKVD
TQYLNKDEKAQPSIINLGFTEKADVPRGTIAFVGGKVITMENDQVIDNGVVIVKDNHI
VAVGDANIAIPKDAQIIDIKGKSIMPGLFDAHAHGQQADDEIVPQQNWALYSGLSLGV
TTIHDPSNDTTEIFAASEQQKAGHIVGPRIFSTGTILYGANAPGYTSHIDSLDDAKFH
LERLKKVGAFSVKSYNQPRRNQRQQVIAAARELEMMVVPEGGSLLQHNLTMVADGHTT
VEHSLPVAAIYNDIKQFWSQTKVGYTPTLVVAYGGISGENYWYDKTDVWAHPRLSMYV
PADILQARSMRRPHAPDGHYNHFNVAKVANELNKLGVHPNIGAHGQREGLAAHWEMWM
FAQGGMSNMEVLKTATINPATTFGMEQQLGSIKAGKLADLIVIDGDPLADIRVTDKVT
YTMVNGKLFNAETMNELNGDKEKRKPFFFEKI"
misc_feature complement(15949..17121)
/locus_tag="Sbal_0015"
/note="Imidazolonepropionase and related amidohydrolases
[Secondary metabolites biosynthesis, transport, and
catabolism]; Region: HutI; COG1228"
/db_xref="CDD:31421"
misc_feature complement(<16876..17094)
/locus_tag="Sbal_0015"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have a...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:206955"
misc_feature complement(15988..16980)
/locus_tag="Sbal_0015"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have a...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:206955"
misc_feature complement(order(16204..16206,16384..16386,16405..16407,
16918..16920,16924..16926))
/locus_tag="Sbal_0015"
/note="active site"
/db_xref="CDD:30035"
gene complement(17727..19064)
/locus_tag="Sbal_0016"
/db_xref="GeneID:4842453"
CDS complement(17727..19064)
/locus_tag="Sbal_0016"
/note="PFAM: WD40 domain protein beta Propeller;
KEGG: she:Shewmr4_0011 amidohydrolase"
/codon_start=1
/transl_table=11
/product="WD40 domain-containing protein"
/protein_id="YP_001048422.1"
/db_xref="GI:126172273"
/db_xref="InterPro:IPR011659"
/db_xref="GeneID:4842453"
/translation="MLKSKLTPLYIALALGMNTLAVNAAETKETEWNVNAPANAPLEQ
VKIDVNEGTWMNLSVSPDGKHIVFDLLGDIYQIPVSGGEAKPLAQGIAWQMQPVYSPD
GKHIAFTSDGDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTAS
RSLGAGEVWLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYS
KDSVNGIYKIKRYDTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRDDFNSSLYLLD
LKSGETTKLFGELDRDMQETWAIHGVYPTMAWTQDNKDIFFWAKGKINRLNVASKTLT
DIPFSVKTELAVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVAFEALGKIWLKSLP
DGKMSRLTELNNGVEELYPQWSRDGKNIVFTTWNDQEQGTVQVLVPKVANLSS"
misc_feature complement(18705..>18791)
/locus_tag="Sbal_0016"
/note="WD40-like Beta Propeller Repeat; Region: PD40;
pfam07676"
/db_xref="CDD:203719"
gene complement(19327..19773)
/locus_tag="Sbal_0017"
/db_xref="GeneID:4844092"
CDS complement(19327..19773)
/locus_tag="Sbal_0017"
/note="KEGG: she:Shewmr4_0012 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048423.1"
/db_xref="GI:126172274"
/db_xref="GeneID:4844092"
/translation="MPKLLAIAYKTVKRGPMNEVLCANVTQLSGVEKDVFGRPGKRQV
TVLSKIQWQQACHSIEADLPWTTRRANLLVDDLVFSSADVGKHLQIGELRLEITGETD
PCKKMEIAHVGLETALTPDWRGGVTCRVLNDAMIHLGDEITLVNPS"
misc_feature complement(19342..19689)
/locus_tag="Sbal_0017"
/note="MOSC domain; Region: MOSC; pfam03473"
/db_xref="CDD:202655"
gene complement(19822..20067)
/locus_tag="Sbal_0018"
/db_xref="GeneID:4842222"
CDS complement(19822..20067)
/locus_tag="Sbal_0018"
/note="TusA; transfers sulfur to TusBCD complex; involved
in thiouridation of U34 position of some tRNAs"
/codon_start=1
/transl_table=11
/product="sulfur transfer protein SirA"
/protein_id="YP_001048424.1"
/db_xref="GI:126172275"
/db_xref="InterPro:IPR001455"
/db_xref="GeneID:4842222"
/translation="MNDAFSTAQHRLDALGLRCPEPVMMVRKTVRQMAAGETLLIIAD
DPATTRDIPSFCEFMDHTLIASETTQTPYQYLIKKGL"
misc_feature complement(19831..20034)
/locus_tag="Sbal_0018"
/note="SirA (also known as UvrY, and YhhP) belongs to a
family of two-component response regulators that controls
secondary metabolism and virulence. The other member of
this two-component system is a sensor kinase called BarA
which phosphorylates SirA. A...; Region: SirA; cd03423"
/db_xref="CDD:48209"
misc_feature complement(order(19996..19998,20002..20013,20020..20022,
20029..20034))
/locus_tag="Sbal_0018"
/note="CPxP motif; other site"
/db_xref="CDD:48209"
gene complement(20238..21400)
/locus_tag="Sbal_0019"
/pseudo
/db_xref="GeneID:4843305"
gene complement(21644..22807)
/gene="fadA"
/locus_tag="Sbal_0020"
/db_xref="GeneID:4842348"
CDS complement(21644..22807)
/gene="fadA"
/locus_tag="Sbal_0020"
/EC_number="2.3.1.16"
/note="FadA; fatty acid oxidation complex component beta;
functions in a heterotetramer with FadB; similar to
FadI2J2 complex; functions in beta-oxidation of fatty
acids"
/codon_start=1
/transl_table=11
/product="3-ketoacyl-CoA thiolase"
/protein_id="YP_001048425.1"
/db_xref="GI:126172276"
/db_xref="InterPro:IPR001412"
/db_xref="InterPro:IPR002155"
/db_xref="InterPro:IPR012805"
/db_xref="GeneID:4842348"
/translation="MKQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQ
LDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAA
RAIMTGMGDTFIIGGVEHMGHVPMSHGVDFHPGLANKVAKASGMMGLTAEMLGKLHGI
TREQQDAFAVRSHQRAYAATVEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMES
LAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCD
AAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINL
NGGAIALGHPLGCSGARISTTLINLMEDKDATLGLATMCIGLGQGIATVFERV"
misc_feature complement(21647..22807)
/gene="fadA"
/locus_tag="Sbal_0020"
/note="3-ketoacyl-CoA thiolase; Reviewed; Region: fadA;
PRK08947"
/db_xref="CDD:181592"
misc_feature complement(21650..22795)
/gene="fadA"
/locus_tag="Sbal_0020"
/note="Thiolase are ubiquitous enzymes that catalyze the
reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and...; Region: thiolase;
cd00751"
/db_xref="CDD:29411"
misc_feature complement(order(21677..21682,21926..21928,21986..21988,
21992..21994,21998..22000,22442..22444,22487..22489,
22496..22501,22520..22522,22544..22555,22586..22588,
22598..22600,22607..22609,22652..22654,22736..22738))
/gene="fadA"
/locus_tag="Sbal_0020"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29411"
misc_feature complement(order(21689..21691,21779..21781,22535..22537))
/gene="fadA"
/locus_tag="Sbal_0020"
/note="active site"
/db_xref="CDD:29411"
gene complement(22830..24980)
/gene="fadB"
/locus_tag="Sbal_0021"
/db_xref="GeneID:4844296"
CDS complement(22830..24980)
/gene="fadB"
/locus_tag="Sbal_0021"
/EC_number="1.1.1.35"
/EC_number="4.2.1.17"
/EC_number="5.1.2.3"
/EC_number="5.3.3.8"
/note="includes enoyl-CoA hydratase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA
epimerase; catalyzes the formation of an hydroxyacyl-CoA
by addition of water on enoyl-CoA; also exhibits
3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA
dehydrogenase activities; forms a heterotetramer with
FadA; similar to FadI2J2 complex; functions in
beta-oxidation of fatty acids"
/codon_start=1
/transl_table=11
/product="multifunctional fatty acid oxidation complex
subunit alpha"
/protein_id="YP_001048426.1"
/db_xref="GI:126172277"
/db_xref="InterPro:IPR001753"
/db_xref="InterPro:IPR006108"
/db_xref="InterPro:IPR006176"
/db_xref="InterPro:IPR006180"
/db_xref="InterPro:IPR012799"
/db_xref="GeneID:4844296"
/translation="MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLTSLDAALD
SIKQDSNIKALVLTSSKDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLP
FPTASAIKGFALGGGCETILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGA
DNALEWITTGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRK
LSALTLPKLEAMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQA
FIKLAKTDVAKALIGIFLNDQFVKGKAKKAGKLAKEVNNAAVLGAGIMGGGIAYQSAS
KGTPIVMKDIAQPALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKH
SDVVVEAVVEHPKIKAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMH
FFNPVHKMPLVEIIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFA
GFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGK
SGTDAIDVMFENKRLGQKNGKGFYVYSVDSRGKPKKDVDPTSYGLLKDAFGELKAFEA
DDIIARTMIPMIIETVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVFRYLDTMGVAN
FVALADKYAHLGGLYQVTDAMRTLAANNGSYYQA"
misc_feature complement(22836..24980)
/gene="fadB"
/locus_tag="Sbal_0021"
/note="multifunctional fatty acid oxidation complex
subunit alpha; Reviewed; Region: fadB; PRK11730"
/db_xref="CDD:183293"
misc_feature complement(24426..24959)
/gene="fadB"
/locus_tag="Sbal_0021"
/note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate synthase,
methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
dehydratase, and dienoyl-CoA isomerase; Region:
crotonase-like; cd06558"
/db_xref="CDD:119339"
misc_feature complement(order(24555..24557,24564..24569,24633..24641,
24645..24647,24771..24785,24795..24797,24891..24893,
24897..24899))
/gene="fadB"
/locus_tag="Sbal_0021"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119339"
misc_feature complement(order(24633..24635,24777..24779))
/gene="fadB"
/locus_tag="Sbal_0021"
/note="oxyanion hole (OAH) forming residues; other site"
/db_xref="CDD:119339"
misc_feature complement(order(24426..24428,24435..24437,24468..24470,
24477..24482,24486..24491,24495..24500,24513..24518,
24522..24530,24534..24536,24552..24563,24597..24608,
24669..24671,24693..24695))
/gene="fadB"
/locus_tag="Sbal_0021"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
misc_feature complement(23499..24038)
/gene="fadB"
/locus_tag="Sbal_0021"
/note="3-hydroxyacyl-CoA dehydrogenase, NAD binding
domain; Region: 3HCDH_N; pfam02737"
/db_xref="CDD:202367"
misc_feature complement(23205..23495)
/gene="fadB"
/locus_tag="Sbal_0021"
/note="3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;
Region: 3HCDH; pfam00725"
/db_xref="CDD:201415"
misc_feature complement(<22869..23102)
/gene="fadB"
/locus_tag="Sbal_0021"
/note="3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;
Region: 3HCDH; pfam00725"
/db_xref="CDD:201415"
gene 25471..26793
/locus_tag="Sbal_0022"
/db_xref="GeneID:4843687"
CDS 25471..26793
/locus_tag="Sbal_0022"
/EC_number="3.4.13.9"
/note="catalyzes the hydrolysis of dipeptides with a
proline at the C-terminal; also catalyzes the low
efficiency hydrolysis of organophosphate di- and
tri-esters"
/codon_start=1
/transl_table=11
/product="proline dipeptidase"
/protein_id="YP_001048427.1"
/db_xref="GI:126172278"
/db_xref="InterPro:IPR000994"
/db_xref="InterPro:IPR001131"
/db_xref="GeneID:4843687"
/translation="MDQLAHHYRAHIAELNRRVAEILSREALSGLVIHSGQPHRMFLD
DINYPFKANPHFKAWLPVLDNPNCWLVVNGRDKPQLIFYRPVDFWHKVSDVPDMFWTE
YFDIKLLTKADKVAEFLPTDIANWAYLGEHLDVAEVLGFTSRNPDAVMSYLHYHRTTK
TEYELECMRRANQIAVQGHLAAKNAFYNGASEFEIQQHYLSAVGQSENEVPYGNIIAL
NQNAAILHYTALEHQSPAKRLSFLIDAGASYFGYASDITRTYAFEKNRFDELITAMNK
AQLELIDMMRPGVRYPDLHLATHAKVAQMLLDFDLATGDVQGLVDQGITSAFFPHGLG
HMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLLNE
LKQDNRGQQINWQTVDELRPFGGIRIEDNVIVHQDRNENMTRKLGLTD"
misc_feature 25471..26784
/locus_tag="Sbal_0022"
/note="proline dipeptidase; Provisional; Region: PRK13607"
/db_xref="CDD:184178"
misc_feature 25519..>25731
/locus_tag="Sbal_0022"
/note="Aminopeptidase P, N-terminal domain; Region: AMP_N;
cl08433"
/db_xref="CDD:208930"
misc_feature 25963..26772
/locus_tag="Sbal_0022"
/note="Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro
dipeptidase, X-Pro dipeptidase, proline dipeptidase.,
imidodipeptidase, peptidase D, gamma-peptidase. Catalyses
hydrolysis of Xaa-Pro dipeptides; also acts on
aminoacyl-hydroxyproline analogs. No action on...; Region:
Prolidase; cd01087"
/db_xref="CDD:29972"
misc_feature order(26146..26148,26200..26202,26233..26235,26473..26475,
26608..26610,26725..26727)
/locus_tag="Sbal_0022"
/note="active site"
/db_xref="CDD:29972"
gene 26821..27351
/locus_tag="Sbal_0023"
/db_xref="GeneID:4843455"
CDS 26821..27351
/locus_tag="Sbal_0023"
/note="PFAM: protein of unknown function UPF0029;
KEGG: she:Shewmr4_0020 protein of unknown function
UPF0029"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048428.1"
/db_xref="GI:126172279"
/db_xref="InterPro:IPR001498"
/db_xref="GeneID:4843455"
/translation="MLESYSVPCEAIVIEEEIKHSRFISFLFHCDSFDKFKLVLTDIK
RDYPGASHYCSAFVAGAPNDSVLIGSSDDGEPAGSAGRPMLAVLQGANIGEVGAVVVR
YYGGTKLGVGGLVRAYTSGLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVD
AVIIDKQFAEAVDIVF"
misc_feature 26872..27198
/locus_tag="Sbal_0023"
/note="Uncharacterized protein family UPF0029; Region:
UPF0029; pfam01205"
/db_xref="CDD:201661"
misc_feature 27244..>27348
/locus_tag="Sbal_0023"
/note="Domain of unknown function (DUF1949); Region:
DUF1949; pfam09186"
/db_xref="CDD:204160"
gene 27513..28970
/locus_tag="Sbal_0024"
/db_xref="GeneID:4845724"
CDS 27513..28970
/locus_tag="Sbal_0024"
/note="TIGRFAM: potassium uptake protein, TrkH family;
PFAM: cation transporter;
KEGG: shn:Shewana3_0027 potassium uptake protein, TrkH
family"
/codon_start=1
/transl_table=11
/product="TrkH family potassium uptake protein"
/protein_id="YP_001048429.1"
/db_xref="GI:126172280"
/db_xref="InterPro:IPR000560"
/db_xref="InterPro:IPR003445"
/db_xref="InterPro:IPR004772"
/db_xref="GeneID:4845724"
/translation="MQYKTIIRIIGLLIGLFSITMLPPALIAVWYNDGGGTAFMQAFF
VSLFIGFWLWYPNRHCKEELRTREGFLIVVLFWTVLGSIGALPFIFSSQPDLSWTDSF
FESFSALTTTGATVIVGLDFLPKAILFYRHMLQWLGGMGIIVLAVAILPVLGVGGMQL
YRAEIPGPVKDSKMTPRIAETAKALWYIYLLLTISCATAYWLAGMSVFDAVCHSFSTI
AIGGFSTHDASMGYFDSSVINLICVFFLIVSAVNFSVHFAAFSRRGINVRVYFKDAEF
KMLVAIQLILTAICFLTLYHSGIYDSPEETLDHALFQAVSVATTAGFGTESFHMWPLF
LPILLIFSSFIGGCGGSTAGGIKVIRVILLLLQGSRELKRLVHPKAMFSIRIGSKALP
DRVVDAVWGFFSAYALVFVICMLALMAMGLDDITAFSATAACLNNLGPGLGAVASNYA
SIGDGAKWVLVAAMLFGRLEVFTLLILFTPTFWKN"
misc_feature 27513..28967
/locus_tag="Sbal_0024"
/note="Cation transport protein; Region: TrkH; cl10514"
/db_xref="CDD:209160"
misc_feature 27561..28964
/locus_tag="Sbal_0024"
/note="Trk-type K+ transport systems, membrane components
[Inorganic ion transport and metabolism]; Region: TrkG;
COG0168"
/db_xref="CDD:30517"
gene 28973..29497
/locus_tag="Sbal_0025"
/db_xref="GeneID:4842520"
CDS 28973..29497
/locus_tag="Sbal_0025"
/EC_number="1.3.3.4"
/note="KEGG: shn:Shewana3_0028 protoporphyrinogen oxidase"
/codon_start=1
/transl_table=11
/product="protoporphyrinogen oxidase"
/protein_id="YP_001048430.1"
/db_xref="GI:126172281"
/db_xref="GeneID:4842520"
/translation="MQTLIIYSTIDGQTLAICQKMKTIAEQAGEQVALVTLEQADALS
LADFDKVLIGASIRYGKHRPELYQFVNRHHAVLDTKINGFFTVNVVARKPLKNTPETN
PYMQKFLQLSLWQPQLLEVFAGKIDYPKYGFFDRTMIRFIMWMTKGPTDITGTFEFTD
WEKVDAFGNRFSQH"
misc_feature 28973..29491
/locus_tag="Sbal_0025"
/note="NADPH-dependent FMN reductase; Region: FMN_red;
cl00438"
/db_xref="CDD:212217"
gene complement(29560..29868)
/locus_tag="Sbal_0026"
/db_xref="GeneID:4845341"
CDS complement(29560..29868)
/locus_tag="Sbal_0026"
/note="PFAM: regulatory protein, ArsR;
KEGG: shn:Shewana3_0029 transcriptional regulator, ArsR
family"
/codon_start=1
/transl_table=11
/product="regulatory protein ArsR"
/protein_id="YP_001048431.1"
/db_xref="GI:126172282"
/db_xref="InterPro:IPR001845"
/db_xref="GeneID:4845341"
/translation="MQNDIDVAAMVTNAESAAKWLKAIANPYRLMILCLLLDKELSVT
ELNATVPLSQSALSQHLAVLRAEDLVDTRKSSQIVYYKLKNEQVTQVISILHSRYCAV
"
misc_feature complement(29617..29808)
/locus_tag="Sbal_0026"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature complement(order(29665..29667,29755..29757,29764..29769,
29776..29781,29788..29790,29797..29799,29803..29808))
/locus_tag="Sbal_0026"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:28974"
misc_feature complement(order(29626..29634,29647..29655,29671..29676,
29680..29685,29692..29697,29701..29712,29737..29745,
29782..29790,29800..29805))
/locus_tag="Sbal_0026"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature complement(order(29734..29736,29743..29745))
/locus_tag="Sbal_0026"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
gene 30069..30620
/locus_tag="Sbal_0027"
/db_xref="GeneID:4842722"
CDS 30069..30620
/locus_tag="Sbal_0027"
/EC_number="1.3.3.4"
/note="KEGG: shn:Shewana3_0030 protoporphyrinogen oxidase"
/codon_start=1
/transl_table=11
/product="protoporphyrinogen oxidase"
/protein_id="YP_001048432.1"
/db_xref="GI:126172283"
/db_xref="InterPro:IPR001226"
/db_xref="GeneID:4842722"
/translation="MTRVLVLYFTRGGHTAKIANAIADQLTFRGAKVDLVDINSAAAT
CINWPDYEVVALGACVLYGTYDKSVFKFIEQHAEALGALPNSFFCVNVVARNPEKRIP
ENNKYLQKFIALSPWTPADLKIIAGKVDYPSWPWYDRLMIQLIMKMTKGPTDPKSVID
YTDWADVKVYADHLLELVDVTAI"
misc_feature 30075..30605
/locus_tag="Sbal_0027"
/note="NADPH-dependent FMN reductase; Region: FMN_red;
cl00438"
/db_xref="CDD:212217"
gene complement(30655..32097)
/locus_tag="Sbal_0028"
/db_xref="GeneID:4841387"
CDS complement(30655..32097)
/locus_tag="Sbal_0028"
/note="TIGRFAM: potassium uptake protein, TrkH family;
PFAM: cation transporter;
KEGG: shm:Shewmr7_0023 potassium uptake protein, TrkH
family"
/codon_start=1
/transl_table=11
/product="TrkH family potassium uptake protein"
/protein_id="YP_001048433.1"
/db_xref="GI:126172284"
/db_xref="InterPro:IPR003445"
/db_xref="InterPro:IPR004772"
/db_xref="GeneID:4841387"
/translation="MLNFRPLLFILGLFLSMLTAFMLIPLLLAVFNAEETVGSFMLSA
LVTGISASLCLHNGQSKTINLNIRDMFLLTSLTWLIVSLFAAMPFTLYHGIGYTDAFF
ETMSGITTTGSTVLSGLDTMDHSILIWRSLLQWLGGIGFIVMAVAILPFLNVGGMRLF
RTESSDWSDKAVPRTQSMAKYLFFIYILLTVACCVAYHLAGMTWFQAINHAMTTLSTG
GYSTSDSSMAAFSHSAHWVGVFFMAAGGLPLLMFVHTIQQRDLRIWNDAQVKGFLFFL
TFVSCSIGFWLWQTRDIELLDALRLSSFNVVSVVTTTGYGLTDYGAWGAFANIAFMFL
MFVGSCSGSTSGGIKIFRFQIAGAIMREQLKQQCHPNGIFRERYNNRIISEDIVRSLI
TFVLLFVMVIVGLSVILVLTGLDPMTSFTGAITAVTNVGPGLGPIIGPAGNFSTLPDV
AKWALSLGMLLGRLEILTVAVLFHPSFWKY"
misc_feature complement(30661..32043)
/locus_tag="Sbal_0028"
/note="Trk-type K+ transport systems, membrane components
[Inorganic ion transport and metabolism]; Region: TrkG;
COG0168"
/db_xref="CDD:30517"
misc_feature complement(30661..32034)
/locus_tag="Sbal_0028"
/note="Cation transport protein; Region: TrkH; cl10514"
/db_xref="CDD:209160"
gene complement(32118..33527)
/gene="trkA"
/locus_tag="Sbal_0029"
/gene_synonym="sapG"
/db_xref="GeneID:4843037"
CDS complement(32118..33527)
/gene="trkA"
/locus_tag="Sbal_0029"
/gene_synonym="sapG"
/note="involved in potassium uptake; found to be
peripherally associated with the inner membrane in
Escherichia coli; contains an NAD-binding domain"
/codon_start=1
/transl_table=11
/product="potassium transporter peripheral membrane
protein"
/protein_id="YP_001048434.1"
/db_xref="GI:126172285"
/db_xref="InterPro:IPR003148"
/db_xref="InterPro:IPR006036"
/db_xref="InterPro:IPR006037"
/db_xref="GeneID:4843037"
/translation="MKIIILGAGQVGGTLAENLVGENNDITIVDHDKSRLRALQDKYD
LRVVAGHAAHPDVLREAGAEDADMLIAVTNSDECNMAACQIAYTLFGTPTKIARIRSE
PYLAMRDKLFIDSETKNSDGRPRGGFVIDELIAPEQLVTAYIQRLVEYPGALQVLEFA
EGRLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADD
EVFFVADSRHIRAVMSEMQKLDNSYRNIMIAGGGNIGLGLAKRLERTHSVKLIEHKYE
RAEALSEQLENTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDEANIMSALLAKRMGA
KKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAI
EAIAHGDASTSKVVGKAIGDIKLPPGTTIGAIVRNDEVLMAHDKTVIEQGDHVILFLV
NKKFVGEVEKLFQPSAFFF"
misc_feature complement(32127..33527)
/gene="trkA"
/locus_tag="Sbal_0029"
/gene_synonym="sapG"
/note="potassium transporter peripheral membrane
component; Reviewed; Region: trkA; PRK09496"
/db_xref="CDD:181909"
misc_feature complement(33183..33521)
/gene="trkA"
/locus_tag="Sbal_0029"
/gene_synonym="sapG"
/note="TrkA-N domain; Region: TrkA_N; pfam02254"
/db_xref="CDD:202177"
misc_feature complement(order(33435..33440,33495..33503))
/gene="trkA"
/locus_tag="Sbal_0029"
/gene_synonym="sapG"
/note="NAD(P) binding pocket [chemical binding]; other
site"
/db_xref="CDD:133449"
misc_feature complement(32817..33032)
/gene="trkA"
/locus_tag="Sbal_0029"
/gene_synonym="sapG"
/note="TrkA-C domain; Region: TrkA_C; pfam02080"
/db_xref="CDD:202105"
misc_feature complement(32445..32744)
/gene="trkA"
/locus_tag="Sbal_0029"
/gene_synonym="sapG"
/note="TrkA-N domain; Region: TrkA_N; pfam02254"
/db_xref="CDD:202177"
misc_feature complement(32139..32327)
/gene="trkA"
/locus_tag="Sbal_0029"
/gene_synonym="sapG"
/note="TrkA-C domain; Region: TrkA_C; pfam02080"
/db_xref="CDD:202105"
gene complement(33543..34829)
/locus_tag="Sbal_0030"
/db_xref="GeneID:4842806"
CDS complement(33543..34829)
/locus_tag="Sbal_0030"
/note="TIGRFAM: sun protein;
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44;
KEGG: shn:Shewana3_0033 sun protein"
/codon_start=1
/transl_table=11
/product="sun protein"
/protein_id="YP_001048435.1"
/db_xref="GI:126172286"
/db_xref="InterPro:IPR001678"
/db_xref="InterPro:IPR004573"
/db_xref="InterPro:IPR006027"
/db_xref="InterPro:IPR006174"
/db_xref="GeneID:4842806"
/translation="MNLRALAAKAIFEVLEKGVSLSVALPDQQKHLASGKDKALLAEL
CYGVMRTLPQIEKRISECLAKPLKGKQRIIHQLLIIGCYQLYFTRIPSHAAISETAEA
CRQLKFEGMVKVVNGVLRNIQRQLSPLSTESDTLSYNTPAWLIKRLKEAYPEQWQDII
QQSHERPPMWLRNNRLSQSRAEYLAALAELEIEASEGSSADAILLAHPKDVATLPRFH
EGAASVQDGAAQWAATLLAPQANELILDACAAPGGKSCHLLELEPSIKLVAVDFDAKR
LERVQQNLDRLSLKAELIHGDAANIDSWWQGGQFDRILLDAPCSATGVIRRHPDIKWL
RKNHDIEELAELQQQILDHCWKWLKPGGTLLYATCSILPQENRDQISAFLERTADAKL
DTLSQQNSPQDIGWQITPGQDNMDGFYYARLLKATD"
misc_feature complement(33552..34829)
/locus_tag="Sbal_0030"
/note="16S rRNA methyltransferase B; Provisional; Region:
PRK10901"
/db_xref="CDD:182822"
misc_feature complement(34455..34829)
/locus_tag="Sbal_0030"
/note="RNA binding domain of NusB (N protein-Utilization
Substance B) and Sun (also known as RrmB or Fmu) proteins.
This family includes two orthologous groups exemplified by
the transcription termination factor NusB and the
N-terminal domain of the...; Region: NusB_Sun; cl00223"
/db_xref="CDD:212179"
misc_feature complement(34818..34826)
/locus_tag="Sbal_0030"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:29564"
misc_feature complement(33732..34100)
/locus_tag="Sbal_0030"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(33882..33884,33936..33944,34014..34019,
34071..34091))
/locus_tag="Sbal_0030"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(34831..35787)
/locus_tag="Sbal_0031"
/db_xref="GeneID:4842408"
CDS complement(34831..35787)
/locus_tag="Sbal_0031"
/note="TIGRFAM: methionyl-tRNA formyltransferase;
PFAM: formyl transferase domain protein;
KEGG: shm:Shewmr7_0026 methionyl-tRNA formyltransferase"
/codon_start=1
/transl_table=11
/product="methionyl-tRNA formyltransferase"
/protein_id="YP_001048436.1"
/db_xref="GI:126172287"
/db_xref="InterPro:IPR001555"
/db_xref="InterPro:IPR002376"
/db_xref="InterPro:IPR005793"
/db_xref="InterPro:IPR005794"
/db_xref="GeneID:4842408"
/translation="MKPLNIIFAGTPDFAARHLQALLNSHHNVIGVYTQPDRPAGRGK
KLTASPVKELAVANNIPVYQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTP
RLGCINVHGSILPRWRGAAPIQRALWAGDKETGVTVMQMDVGLDTGDMLLKTTLPIED
SDTSASLYEKLAEQGPVALLQALEGLANGTLAAEKQDEALANYAEKLSKEEARLDWNK
SAQQLWQEVRAFNPWPVSYFEHQGNTIKVWQTQVSETTSTAAPGTIISASKKGIEVAT
ADGVLTLLNMQLPGKKPLNVADILNARGEWFSPNTRLANEAQ"
misc_feature complement(34846..35778)
/locus_tag="Sbal_0031"
/note="methionyl-tRNA formyltransferase; Reviewed; Region:
fmt; PRK00005"
/db_xref="CDD:178787"
misc_feature complement(35167..35778)
/locus_tag="Sbal_0031"
/note="Methionyl-tRNA formyltransferase, N-terminal
hydrolase domain; Region: FMT_core_Met-tRNA-FMT_N;
cd08646"
/db_xref="CDD:187715"
misc_feature complement(order(35350..35355,35362..35367,35371..35373,
35431..35433,35455..35466,35491..35493,35506..35529,
35743..35748,35758..35760))
/locus_tag="Sbal_0031"
/note="putative active site [active]"
/db_xref="CDD:187715"
misc_feature complement(order(35170..35172,35425..35433,35455..35460,
35464..35466,35515..35526,35656..35667,35671..35673,
35683..35685,35746..35748,35752..35757))
/locus_tag="Sbal_0031"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187715"
misc_feature complement(order(35350..35355,35362..35367,35464..35466,
35491..35493,35506..35514,35518..35520,35527..35529))
/locus_tag="Sbal_0031"
/note="putative cosubstrate binding site; other site"
/db_xref="CDD:187715"
misc_feature complement(order(35350..35352,35458..35460,35464..35466))
/locus_tag="Sbal_0031"
/note="catalytic site [active]"
/db_xref="CDD:187715"
misc_feature complement(34900..35160)
/locus_tag="Sbal_0031"
/note="C-terminal domain of Formyltransferase and other
enzymes; Region: Met_tRNA_FMT_C; cd08704"
/db_xref="CDD:187732"
misc_feature complement(order(34906..34908,34912..34917,34921..34923,
34927..34929,35050..35052,35056..35058,35089..35091))
/locus_tag="Sbal_0031"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187732"
gene complement(35796..36308)
/gene="def"
/locus_tag="Sbal_0032"
/db_xref="GeneID:4842588"
CDS complement(35796..36308)
/gene="def"
/locus_tag="Sbal_0032"
/EC_number="3.5.1.88"
/note="cleaves off formyl group from N-terminal methionine
residues of newly synthesized proteins; binds iron(2+)"
/codon_start=1
/transl_table=11
/product="peptide deformylase"
/protein_id="YP_001048437.1"
/db_xref="GI:126172288"
/db_xref="InterPro:IPR000181"
/db_xref="GeneID:4842588"
/translation="MAQLKVLQFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKG
IGLAATQVDYHKQLIVMDLQDEVERPKVFINPEIIASSGDFCNEEGCLSVPGIYAKVD
RAEFVTVKALDRHGNEFIVEADELFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLE
KAARLDAKEA"
misc_feature complement(35880..36293)
/gene="def"
/locus_tag="Sbal_0032"
/note="Polypeptide or peptide deformylase; a family of
metalloenzymes that catalyzes the removal of the
N-terminal formyl group in a growing polypeptide chain
following translation initiation during protein synthesis
in prokaryotes. These enzymes utilize Fe(II)...; Region:
Pep_deformylase; cd00487"
/db_xref="CDD:29602"
misc_feature complement(order(35898..35900,35907..35912,36033..36041,
36156..36158,36171..36179))
/gene="def"
/locus_tag="Sbal_0032"
/note="active site"
/db_xref="CDD:29602"
misc_feature complement(order(35907..35909,36033..36035,36156..36158,
36171..36173))
/gene="def"
/locus_tag="Sbal_0032"
/note="catalytic residues [active]"
/db_xref="CDD:29602"
misc_feature complement(order(35898..35900,35910..35912,36036..36038))
/gene="def"
/locus_tag="Sbal_0032"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:29602"
gene 36434..37564
/locus_tag="Sbal_0033"
/db_xref="GeneID:4841916"
CDS 36434..37564
/locus_tag="Sbal_0033"
/note="PFAM: Peptidoglycan-binding LysM;
KEGG: shm:Shewmr7_0028 peptidoglycan-binding LysM"
/codon_start=1
/transl_table=11
/product="peptidoglycan-binding LysM"
/protein_id="YP_001048438.1"
/db_xref="GI:126172289"
/db_xref="InterPro:IPR002482"
/db_xref="GeneID:4841916"
/translation="MEIPMKRLILLALMTFNCTFVAADTLTLKAGHPESYVVKKGDTL
WDISAAFLNDPWKWPRLWDVNPQIANPHLIYPGDQLTLVFVDGQPRLVRNGDMVDSAK
PHVKKSPEGRIIAKSNAIPAVDLALIEHYLVQNRVVATDWLAEQPMVLAGESPSRHHI
VGDVIYIDAELPMNQKYGVYERGREFFNKASGEAIGQEAILASTGQVVESGKVSKIKL
LTSFRETKAGFRVMPMESDSLMSAYFTPKPAELKTPAVVLAIESKMREAGKLDVVYLD
KGTQDGVEPGVVFSIYRDGEVIVINNDGMPVPATERTAYDNLMASVSSDRAIQMPDIY
HGKLLVFKVFDKASLGLIVSTERPVRVDDKLIAPESLALRGQ"
misc_feature 36536..36679
/locus_tag="Sbal_0033"
/note="Lysine Motif is a small domain involved in binding
peptidoglycan; Region: LysM; cd00118"
/db_xref="CDD:212030"
gene 37648..38664
/locus_tag="Sbal_0034"
/db_xref="GeneID:4841920"
CDS 37648..38664
/locus_tag="Sbal_0034"
/note="TIGRFAM: DNA protecting protein DprA;
PFAM: SMF family protein;
KEGG: son:SO0034 DNA processing protein DprA, putative"
/codon_start=1
/transl_table=11
/product="DNA protecting protein DprA"
/protein_id="YP_001048439.1"
/db_xref="GI:126172290"
/db_xref="InterPro:IPR003488"
/db_xref="GeneID:4841920"
/translation="MEVDDLRQRLEHEREALPLSDHLLHSLAIDYQKVDVALEWQQQA
ADHHLVCFSDPLYPPLLKQLSDPPAVLFVKGCLEALALPYLAIVGSRNASPGGLQVAY
QLAVEMCSMGFGICSGMAMGIDGAAHKACVEHQGRTVAVLGTGIETVYPRKHRQLYHD
IQQQGCILSEFWPDVGPFAGNFPKRNRIISGLSLGTLVVEACRKSGSLITARLAMEQG
REVFAVPGSILGGYHQGCHDLLRDGAKLVETAADIVEELASLTAYHLEELKLCHHIQQ
GEICNLPFSSLLASVGYETTSIDAVVEHSGKTIDLVLEQMLELELQGWVIAVPGGYVR
VKRS"
misc_feature 37759..38418
/locus_tag="Sbal_0034"
/note="DNA protecting protein DprA; Region: dprA;
TIGR00732"
/db_xref="CDD:129815"
misc_feature 37774..38394
/locus_tag="Sbal_0034"
/note="DNA recombination-mediator protein A; Region:
DNA_processg_A; pfam02481"
/db_xref="CDD:145559"
gene 38667..39140
/locus_tag="Sbal_0035"
/db_xref="GeneID:4842395"
CDS 38667..39140
/locus_tag="Sbal_0035"
/note="PFAM: protein of unknown function DUF494;
KEGG: son:SO0035 Smg protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048440.1"
/db_xref="GI:126172291"
/db_xref="InterPro:IPR007456"
/db_xref="GeneID:4842395"
/translation="MFDILMYLFENYVHSEVELLVDEDELTKELTRAGFHQSEILKAL
TWLERLAELQEGDKPYLCNHDQHSFRIYTKDEMDKLDVESRGFLLFLEQVKVLNVETR
EMVIDRVMELDEPTLILEDLKWVILMVLFNAPGHESAYEQMEDLIFEQPEGRLHS"
misc_feature 38667..39134
/locus_tag="Sbal_0035"
/note="Protein of unknown function (DUF494); Region:
DUF494; pfam04361"
/db_xref="CDD:146808"
gene 39254..39823
/locus_tag="Sbal_0036"
/db_xref="GeneID:4843392"
CDS 39254..39823
/locus_tag="Sbal_0036"
/note="PFAM: DNA topoisomerase, type IA, zn finger domain
protein;
KEGG: shm:Shewmr7_0031 DNA topoisomerase, type IA, zn
finger domain protein"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase type IA Zn finger
domain-containing protein"
/protein_id="YP_001048441.1"
/db_xref="GI:126172292"
/db_xref="InterPro:IPR013498"
/db_xref="GeneID:4843392"
/translation="MIMSKIDEQLFSAHEHALEKEYELCPECGSELSVKHSKHGGFIG
CNNYPSCNYTRPLVQHESIETQVIEGSVCPECGHELAVKSGRFGIFIGCTQYPSCTHI
EKQDQASDKPDIPCPECKTGKLEHRTSRFGKSFYACSAYPKCKFIVNYPPVAEACPSC
GFGILVERKGAAGMRLECPQKTCKYKRPL"
misc_feature 39320..39424
/locus_tag="Sbal_0036"
/note="Topoisomerase DNA binding C4 zinc finger; Region:
zf-C4_Topoisom; pfam01396"
/db_xref="CDD:110400"
misc_feature 39431..39811
/locus_tag="Sbal_0036"
/note="Zn-finger domain associated with topoisomerase type
I [DNA replication, recombination, and repair]; Region:
TopA; COG0551"
/db_xref="CDD:30897"
misc_feature 39470..39565
/locus_tag="Sbal_0036"
/note="Topoisomerase DNA binding C4 zinc finger; Region:
zf-C4_Topoisom; pfam01396"
/db_xref="CDD:110400"
misc_feature 39599..39709
/locus_tag="Sbal_0036"
/note="Topoisomerase DNA binding C4 zinc finger; Region:
zf-C4_Topoisom; pfam01396"
/db_xref="CDD:110400"
gene 39950..40516
/locus_tag="Sbal_0037"
/db_xref="GeneID:4844446"
CDS 39950..40516
/locus_tag="Sbal_0037"
/note="TIGRFAM: Sua5/YciO/YrdC/YwlC family protein;
PFAM: SUA5/yciO/yrdC, N-terminal domain;
KEGG: son:SO0037 Sua5/YciO/YrdC/YwlC family protein"
/codon_start=1
/transl_table=11
/product="Sua5/YciO/YrdC/YwlC family protein"
/protein_id="YP_001048442.1"
/db_xref="GI:126172293"
/db_xref="InterPro:IPR004388"
/db_xref="InterPro:IPR006070"
/db_xref="GeneID:4844446"
/translation="MLQLHPSDIKDIILQGGVIAYPTEAVYGLGCDPDNDTAIQKLLA
VKQRPWQKGLILVASDFQQLLAYVDESQLTAEQLEFAFSKWPGPFTFVMPIKAHVSKY
LCGEFDSIAVRVSAHAGVQALCRALNKPLVSTSANLAGEDPALTAAEILADFTGKIDA
LVLGELGEQRQPSTIIDARSGKILRNGQ"
misc_feature 39968..40510
/locus_tag="Sbal_0037"
/note="Telomere recombination; Region: Sua5_yciO_yrdC;
cl00305"
/db_xref="CDD:206970"
gene 40542..41450
/locus_tag="Sbal_0038"
/db_xref="GeneID:4842128"
CDS 40542..41450
/locus_tag="Sbal_0038"
/EC_number="1.3.3.3"
/note="catalyzes the conversion of the propionic acid
groups of rings I and III to vinyl groups during heme
synthesis"
/codon_start=1
/transl_table=11
/product="coproporphyrinogen III oxidase"
/protein_id="YP_001048443.1"
/db_xref="GI:126172294"
/db_xref="InterPro:IPR001260"
/db_xref="GeneID:4842128"
/translation="MSVPDAAVVKAFLLDLQNRICAGLQALDGQARFAADSWTRAEGG
GGTSRVLTQGAVFEQAGVNFSHVTGAAMPASATAHRPELAGRSFEAMGVSLVIHPNNP
YIPTTHANVRFFIAQKEGADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDE
VYPKYKKWCDEYFFLPHRNETRGVGGLFFDDLNQAGFEQSFSFMQAVGNGFLTAYAPI
VERRKDTEFGERERQFQLYRRGRYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRW
QYAYTPEAGSPEADLYDNYLKPRDWV"
misc_feature 40542..41447
/locus_tag="Sbal_0038"
/note="coproporphyrinogen III oxidase; Provisional;
Region: PRK05330"
/db_xref="CDD:180020"
gene complement(41485..41922)
/locus_tag="Sbal_0039"
/db_xref="GeneID:4842521"
CDS complement(41485..41922)
/locus_tag="Sbal_0039"
/note="PFAM: globin;
KEGG: son:SO0039 hypothetical globin"
/codon_start=1
/transl_table=11
/product="globin"
/protein_id="YP_001048444.1"
/db_xref="GI:126172295"
/db_xref="InterPro:IPR001486"
/db_xref="GeneID:4842521"
/translation="MNWLKKIFSKHTPPQDDRDPSQSNAYDLIGGEKVIRAITKCFYQ
KMASSAETTTLLAIHRAPIAESEQKLFEFLSGWLGGPQLYQQKYGHPALRARHMHVDI
DEAMRDQWLFCMKFAIEENIKKPEHRAAIFEAISTLADHMRNQ"
misc_feature complement(41488..41853)
/locus_tag="Sbal_0039"
/note="Truncated hemoglobins (trHbs) are a family of
oxygen-binding heme proteins found in cyanobacteria,
eubacteria, unicellular eukaryotes, and plants. The
truncated hemoglobins have a characteristic two-over-two
alpha helical folding pattern that is distinct...; Region:
Trunc_globin; cd00454"
/db_xref="CDD:29978"
misc_feature complement(order(41518..41520,41527..41529,41560..41562,
41569..41571,41581..41583,41590..41592,41689..41691,
41698..41703,41797..41799,41806..41811,41818..41823,
41836..41838))
/locus_tag="Sbal_0039"
/note="apolar tunnel; other site"
/db_xref="CDD:29978"
misc_feature complement(order(41497..41499,41509..41511,41593..41595,
41602..41604,41623..41625,41632..41637,41647..41649,
41653..41655,41671..41673,41701..41706,41713..41715,
41725..41727,41755..41760,41794..41796))
/locus_tag="Sbal_0039"
/note="heme binding site [chemical binding]; other site"
/db_xref="CDD:29978"
misc_feature complement(order(41557..41565,41575..41577,41584..41586,
41776..41781,41788..41790))
/locus_tag="Sbal_0039"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29978"
gene 42076..42924
/gene="aroE"
/locus_tag="Sbal_0040"
/db_xref="GeneID:4842795"
CDS 42076..42924
/gene="aroE"
/locus_tag="Sbal_0040"
/EC_number="1.1.1.25"
/note="AroE; catalyzes the conversion of shikimate to
3-dehydroshikimate"
/codon_start=1
/transl_table=11
/product="shikimate 5-dehydrogenase"
/protein_id="YP_001048445.1"
/db_xref="GI:126172296"
/db_xref="InterPro:IPR006151"
/db_xref="InterPro:IPR011342"
/db_xref="InterPro:IPR013708"
/db_xref="GeneID:4842795"
/translation="MTDRYAVFGNPISHSKSPFIHGQFAAPTQESLTYEAILAPVDGF
EASLTAFFNAGGKGANVTVPFKEQAFALCDSISPEAKLAGAVNTLSLLADGTIRGDNT
DGLGLVADLIANLGSLQDKRVLLIGAGGAARGCILPLLNAGIAQLIISNRTHTKAQLL
VDIFTSVDNGAFANRVTAVEMNELAGEFDIIINSTSASLVGELPPLPTHIITTQTVCY
DMMYGASVTAFNQWALSQGAAKVIDGLGMLVGQAAKSFTLWRGIEPDTQVVLTLLRDK
LMAEPK"
misc_feature 42076..42912
/gene="aroE"
/locus_tag="Sbal_0040"
/note="shikimate 5-dehydrogenase; Reviewed; Region: aroE;
PRK00258"
/db_xref="CDD:178949"
misc_feature 42094..42342
/gene="aroE"
/locus_tag="Sbal_0040"
/note="Shikimate dehydrogenase substrate binding domain;
Region: Shikimate_dh_N; pfam08501"
/db_xref="CDD:149523"
misc_feature 42379..42858
/gene="aroE"
/locus_tag="Sbal_0040"
/note="NAD(P) binding domain of Shikimate dehydrogenase;
Region: NAD_bind_Shikimate_DH; cd01065"
/db_xref="CDD:133443"
misc_feature order(42382..42384,42739..42741,42817..42819,42826..42828)
/gene="aroE"
/locus_tag="Sbal_0040"
/note="shikimate binding site; other site"
/db_xref="CDD:133443"
misc_feature order(42457..42459,42466..42468,42526..42531,42655..42663,
42733..42735,42805..42807,42814..42819)
/gene="aroE"
/locus_tag="Sbal_0040"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:133443"
gene 42930..43205
/locus_tag="Sbal_0041"
/db_xref="GeneID:4843982"
CDS 42930..43205
/locus_tag="Sbal_0041"
/note="PFAM: protein of unknown function DUF1488;
KEGG: son:SO0041 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048446.1"
/db_xref="GI:126172297"
/db_xref="InterPro:IPR009962"
/db_xref="GeneID:4843982"
/translation="MNQSILFPDLQYWDDAQGQICFMAQSQGMNIKCYISAAKLRELN
DFSEQPSTDEAAAMLALFDAVRFDAEEMAEELIEAEEFDEFGAVRLG"
misc_feature 42939..>43127
/locus_tag="Sbal_0041"
/note="Protein of unknown function (DUF1488); Region:
DUF1488; pfam07369"
/db_xref="CDD:191733"
gene complement(43325..43873)
/locus_tag="Sbal_0042"
/db_xref="GeneID:4844305"
CDS complement(43325..43873)
/locus_tag="Sbal_0042"
/note="KEGG: shn:Shewana3_0045 carbonic anhydrase, family
3"
/codon_start=1
/transl_table=11
/product="carbonic anhydrase"
/protein_id="YP_001048447.1"
/db_xref="GI:126172298"
/db_xref="InterPro:IPR001451"
/db_xref="GeneID:4844305"
/translation="MSGPLRTYQGIHPQLGNNVYVDEASVLVGDIALDTDASIWPMVA
ARGDVNHIRIGKRSNVQDGSILHVTRKSAARPDGHPLIIGDDVTIGHKAMLHGCKVGN
RVLVGMGAIILDGAILEDDVILGAGSLVPPGKVLQSGYLYVGSPAKQARPLTPAEMAF
LPESADNYVRLKNEYLVELQNI"
misc_feature complement(43334..43864)
/locus_tag="Sbal_0042"
/note="Carbonic anhydrases/acetyltransferases, isoleucine
patch superfamily [General function prediction only];
Region: PaaY; COG0663"
/db_xref="CDD:31007"
misc_feature complement(43355..43834)
/locus_tag="Sbal_0042"
/note="Gamma carbonic anhydrase-like: This family is
composed of gamma carbonic anhydrase (CA), Ferripyochelin
Binding Protein (FBP), E. coli paaY protein, and similar
proteins. CAs are zinc-containing enzymes that catalyze
the reversible hydration of carbon...; Region:
LbH_gamma_CA_like; cd04645"
/db_xref="CDD:100051"
misc_feature complement(order(43550..43552,43586..43588,43592..43603,
43673..43675,43685..43690,43730..43732,43736..43738,
43742..43747,43754..43756,43790..43792,43799..43804,
43808..43810,43814..43816))
/locus_tag="Sbal_0042"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:100051"
misc_feature complement(order(43586..43588,43601..43603,43673..43675))
/locus_tag="Sbal_0042"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:100051"
gene 44440..45976
/locus_tag="Sbal_R0001"
/db_xref="GeneID:4844939"
rRNA 44440..45976
/locus_tag="Sbal_R0001"
/product="16S ribosomal RNA"
/db_xref="GeneID:4844939"
gene 46345..49247
/locus_tag="Sbal_R0002"
/db_xref="GeneID:4842349"
rRNA 46345..49247
/locus_tag="Sbal_R0002"
/product="23S ribosomal RNA"
/db_xref="GeneID:4842349"
gene 49388..49502
/locus_tag="Sbal_R0003"
/db_xref="GeneID:4842350"
rRNA 49388..49502
/locus_tag="Sbal_R0003"
/product="5S ribosomal RNA"
/db_xref="GeneID:4842350"
gene 49791..52241
/locus_tag="Sbal_0043"
/db_xref="GeneID:4842351"
CDS 49791..52241
/locus_tag="Sbal_0043"
/note="KEGG: shn:Shewana3_4120 diguanylate
phosphodiesterase;
TIGRFAM: PAS sensor protein;
PFAM: GGDEF domain containing protein; EAL domain protein;
histidine kinase, HAMP region domain protein; PAS fold-3
domain protein; PAS fold domain protein;
SMART: PAS domain containing protein; PAC
repeat-containing protein"
/codon_start=1
/transl_table=11
/product="PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase"
/protein_id="YP_001048448.1"
/db_xref="GI:126172299"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR001610"
/db_xref="InterPro:IPR001633"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR013655"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:4842351"
/translation="MLRKLSLAVLLPLCMLTLYLVLVIGEYLFESDQVRAELAQRQST
LIKQQLFRMQNVVQSAQALQDVERIEQEVSLAALDMGTMVYILVDADSRIRFANHTVW
RDSNAMQVIDGYDATRDRAVVQAFLPQILVNLERLTIQAYYPVLPQYGGAVDLIYLEA
DLAPLVAEASAKLQQRFMRVWGLGGLLLIGFTFILYFLLIRPFQILSEAAKQVGTSSF
STSIPWSSSEVLSLQASLQQVHERLSRAVKQLNDSELRWLFAVEGSRNGIWDWDISTG
EVFLSDRWKEMIGYAPDELAGVFQTWEARLHPDDRDIVLDALQEYVSGKSKEFESVHR
LRHREGHYVWVLDRGMLVDWDPQGRPTRMIGIHMDVSESAKNHAAINELVDQSVTGRK
MLPDVFMARLSQFLTQGNSSGQWGSLLLVEVDRLGLVATLNSHELERLLTQVAARLSS
YFTENITVGRLESGDFVLLAKDLAIDASVAARRALALASELRQVIARPFHYGHHHFEL
SANVGICLLDSIETLDPALVMRRAELATLSAKRPGQAGCAFYHAEMDLRQSRDEQLQQ
ELQTALQQDSMTLMFQPVMNAHSELVSAEVLTRWYRTDGEFIPPAEFVALAEQGGMIA
ELDFWVANRVCQFIQTSHAQGWSLPTLTLNISAFSFGQADFVDALIALVKEHGIAPHQ
LGIELNEAALLMQPQFVAERVSKLVDAGIGIVLDHFGSGSSALSCLANQPLVAVKLDM
SCIDSLAAMPQRVKALIVSAQQFNLHVVAKGVESPQHYQAFVEFGCDGYQGYLFSRAL
NQADFIQLVCPRPLLRSV"
misc_feature 50580..50900
/locus_tag="Sbal_0043"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature 50619..50891
/locus_tag="Sbal_0043"
/note="PAS fold; Region: PAS_3; pfam08447"
/db_xref="CDD:203948"
misc_feature order(50628..50630,50640..50642,50658..50660,50703..50714,
50793..50795,50808..50810)
/locus_tag="Sbal_0043"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(50694..50696,50706..50708,50730..50732,50739..50744,
50829..50831,50835..50837)
/locus_tag="Sbal_0043"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 50982..51419
/locus_tag="Sbal_0043"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature order(51054..51056,51180..51182)
/locus_tag="Sbal_0043"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(51069..51071,51078..51080,51090..51092,51102..51104,
51168..51170,51174..51185)
/locus_tag="Sbal_0043"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(51156..51158,51258..51260)
/locus_tag="Sbal_0043"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature 51513..52196
/locus_tag="Sbal_0043"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene complement(52198..53181)
/locus_tag="Sbal_0044"
/db_xref="GeneID:4841915"
CDS complement(52198..53181)
/locus_tag="Sbal_0044"
/note="PFAM: alpha/beta hydrolase fold;
KEGG: shn:Shewana3_4119 alpha/beta hydrolase fold"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold domain-containing
protein"
/protein_id="YP_001048449.1"
/db_xref="GI:126172300"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR003089"
/db_xref="InterPro:IPR008262"
/db_xref="GeneID:4841915"
/translation="MSQAKATFSTEHDLNTSEQQAFWQSVVQDTLITADGITLAYMMV
KHPQAHTAIVLSSGRVESYLKYQELVFDLYQQGYSVYAIDHRGQGLSDRMTINPHMGH
VRRFNDYIDDFALFMQKKVLPQNDKQLMLLGHSMGGAIGTLYLKQHPDIFTAAAFSAP
MYGIKLPMPKAFVRWLASKLDTTLNGGEPNYVLGGQNYKPVPFKGNELTHCQSRYQAY
RDLYDAAPKLQLGSPTNRWLTESLDAADTCVLATAQIRTPILILQASEDKIVDNAAQN
LAVSTHCQLKVIAGAAHEIFMEKDAYRNQALNYALDFFKRFAIKDEDKQAG"
misc_feature complement(52231..53118)
/locus_tag="Sbal_0044"
/note="lysophospholipase L2; Provisional; Region:
PRK10749"
/db_xref="CDD:182697"
misc_feature complement(52828..53076)
/locus_tag="Sbal_0044"
/note="Putative lysophospholipase; Region: Hydrolase_4;
pfam12146"
/db_xref="CDD:204836"
gene complement(53277..55088)
/locus_tag="Sbal_0045"
/db_xref="GeneID:4842382"
CDS complement(53277..55088)
/locus_tag="Sbal_0045"
/note="PFAM: protein of unknown function DUF885;
KEGG: shn:Shewana3_4118 protein of unknown function
DUF885"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048450.1"
/db_xref="GI:126172301"
/db_xref="InterPro:IPR000437"
/db_xref="InterPro:IPR010281"
/db_xref="GeneID:4842382"
/translation="MHKLLTPSLLICALSACSATQITKNSQTAAPQAISTAQSQVEPI
APALQAIIDQSWQLQLSASPEMAYSMGDASAAGKLSDLSPAALAKLNQGQIAVLAQLK
ALDRSSLSKEDKINAQILEDQIQNDVDLYRFKDYYLPITAESGFHAYITSIAQGRFNT
LEDYRNYIAKLNALPTYFAQQTHWLKQGLAEGITPPKVTLNGFEDSISAYIVPVEKSG
YFKPFTQYPSYFTEAQKTQLTQEGRALVEQKVLPLYQNFYDFMTKEYIPNARENIAAS
SLPNGAEFYENRVRYYTTLNMTSAEVHELGLKEVKRIRQEMEQIIKSVGFKGSFADFL
HFLRTDPQFYTTSADQLLKEAAFIAKKADAMLPKYFGKLPRKPYGIAPVPAEIAPKYT
TGRYSGSNSDDEPGYYWVNTYALDKRPLYELEALTLHEAVPGHHLQISLNSELTSLPD
FRRYGYISAFGEGWGLYCEYLGLEAGFYQDPYSNFGRLTYEMWRAARLVVDTGMHAQG
WSRQQAIDFMASNTALSLHNVTTEIDRYISWPGQALSYKIGELTIKRLRAKAEQELGD
KFDIRAFHDAVLENGSVPMSILEQQINDFIEAKKATR"
misc_feature complement(53301..54902)
/locus_tag="Sbal_0045"
/note="Bacterial protein of unknown function (DUF885);
Region: DUF885; pfam05960"
/db_xref="CDD:203359"
gene 55299..56294
/locus_tag="Sbal_0046"
/db_xref="GeneID:4842688"
CDS 55299..56294
/locus_tag="Sbal_0046"
/EC_number="3.5.4.4"
/note="catalyzes the formation of inosine from adenosine"
/codon_start=1
/transl_table=11
/product="adenosine deaminase"
/protein_id="YP_001048451.1"
/db_xref="GI:126172302"
/db_xref="InterPro:IPR001365"
/db_xref="InterPro:IPR006330"
/db_xref="GeneID:4842688"
/translation="MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLA
PFVQIQGKETSLVAFLKKLDWMVGVLADLDAVKRVAYENVADAALSGLDYAELRFSPY
YMAMNHKLPIEGVVEAVVDGVKAGLKDYNVKINLIGILSRSFGQAACTQELEGLLAHK
QHLVAMDLAGDEMGFPGELFNEHFKRVRDADLAITAHAGEAAGSQSMWQAIQELGATR
IGHGVNAIHDPKLMEYLAKHRIGIESCPTSNLHTSTVASYADHPFRTFMDAGVLINLN
TDDPGVSAIDINHEYRIAKSELKLTDAELAQVQRNGVEMAFLSDSERKALYAAKV"
misc_feature 55299..56285
/locus_tag="Sbal_0046"
/note="Adenosine deaminase [Nucleotide transport and
metabolism]; Region: Add; COG1816"
/db_xref="CDD:32001"
misc_feature 55299..56282
/locus_tag="Sbal_0046"
/note="adenosine deaminase; Provisional; Region: PRK09358"
/db_xref="CDD:181797"
misc_feature order(55332..55334,55338..55340,55887..55889,55959..55961,
56130..56132)
/locus_tag="Sbal_0046"
/note="active site"
/db_xref="CDD:30035"
gene complement(56389..57729)
/locus_tag="Sbal_0047"
/db_xref="GeneID:4842399"
CDS complement(56389..57729)
/locus_tag="Sbal_0047"
/note="catalyzes the oxygen-independent formation of
protoporphyrinogen-IX from coproporphyrinogen-III"
/codon_start=1
/transl_table=11
/product="coproporphyrinogen III oxidase"
/protein_id="YP_001048452.1"
/db_xref="GI:126172303"
/db_xref="InterPro:IPR004558"
/db_xref="InterPro:IPR006638"
/db_xref="InterPro:IPR007197"
/db_xref="InterPro:IPR010723"
/db_xref="GeneID:4842399"
/translation="MIEKYNYSGPRYTSYPTALEFDDTFTEQNLLTAIENSKSDKLSL
YIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRAPLFKHYSVTQMHWGGG
TPTFLNPEQILKLTSLIKANFNFAEEGEYSIEVDPREIELSMLDTLKEAGFNRISIGV
QDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQTPETFAVTMQRV
LDLSPDRLSVFNYAHLPARFAAQRKIKDEHLPSPKQKLEMLHQTIETLTGAGYQYIGM
DHFAKPDDELAKLQREGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQNQKDIRP
YYEAIDKEGHALWKGCSLNRDDEIRRVVIKQLICHFELDMAKIDEKLGINFETYFAED
LKLMQTFIDDKLVEIVDRQITISPTGRLLIRNICMCFDLYYRQKARQQQFSRVI"
misc_feature complement(56392..57729)
/locus_tag="Sbal_0047"
/note="coproporphyrinogen III oxidase; Provisional;
Region: PRK09249"
/db_xref="CDD:181727"
misc_feature complement(57025..57579)
/locus_tag="Sbal_0047"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature complement(order(57037..57042,57130..57132,57253..57255,
57322..57330,57421..57426,57430..57432,57553..57561,
57565..57567,57571..57573,57577..57579))
/locus_tag="Sbal_0047"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
misc_feature complement(56470..56676)
/locus_tag="Sbal_0047"
/note="HemN C-terminal domain; Region: HemN_C; pfam06969"
/db_xref="CDD:203555"
gene complement(58027..58494)
/locus_tag="Sbal_0048"
/db_xref="GeneID:4844295"
CDS complement(58027..58494)
/locus_tag="Sbal_0048"
/note="KEGG: shn:Shewana3_4115 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048453.1"
/db_xref="GI:126172304"
/db_xref="GeneID:4844295"
/translation="MSTAIIILGFIIIVALSSYATFLILKLKQQKKRQQAEQAEREVT
ANAKRAQVLDDIRYIATAMIEDRCEISEGVVRIGRLFEMLSLSERVAPDYPSLFKHFE
LIKDHPIMDARQALPKQERMKLDLIRMKSEAALEQGISDDAKKLADYQAKAMH"
misc_feature complement(58057..58455)
/locus_tag="Sbal_0048"
/note="Protein of unknown function (DUF2489); Region:
DUF2489; pfam10675"
/db_xref="CDD:151176"
gene complement(58569..59129)
/locus_tag="Sbal_0049"
/db_xref="GeneID:4841726"
CDS complement(58569..59129)
/locus_tag="Sbal_0049"
/note="PFAM: protein of unknown function DUF414;
KEGG: shn:Shewana3_4114 protein of unknown function
DUF414"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048454.1"
/db_xref="GI:126172305"
/db_xref="InterPro:IPR007336"
/db_xref="GeneID:4841726"
/translation="MSRSKKTRKGGENSPKLQPRVKKQDRAVATGKRKDSGNKSGSRH
NESLILAQAPQQQAAKKKDPRHGSKKPIALAIPAAVVTDKAAQPKVKQAKLTDEQKLL
KLEEDPRLNQLLDMLEEGRDLNDVDQKWLDQQLSKIEALMIKLGISDDMDNDAPSSPA
KSLSDDELFDKFESGADLLKDYQDKF"
misc_feature complement(58611..59108)
/locus_tag="Sbal_0049"
/note="Der GTPase activator (YihI); Region: YihI;
pfam04220"
/db_xref="CDD:202934"
gene complement(59220..59858)
/locus_tag="Sbal_0050"
/db_xref="GeneID:4842419"
CDS complement(59220..59858)
/locus_tag="Sbal_0050"
/note="KEGG: son:SO4727 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048455.1"
/db_xref="GI:126172306"
/db_xref="GeneID:4842419"
/translation="MPRCPLCHNSQTQLLHQDKKRSFYVCKTCELTFADANSHLPPAA
EKQRYGRSRIALKQKQLSQFILPLLAQLEQQQAGSLLGLNFGRILNDESLATIENAGH
KLNQYDPFFAPNHDVLKQEYDFICCYRVFEHFQYPIKEWALLSRLLHSGGWLAISTPL
LTELDGFAKWHYKNNLTHVSFYQRQTFEYLANNSDFELLFAVKDLVLMQKTS"
misc_feature complement(59262..>59561)
/locus_tag="Sbal_0050"
/note="Methyltransferase domain; Region: Methyltransf_23;
pfam13489"
/db_xref="CDD:205667"
misc_feature complement(59391..>59495)
/locus_tag="Sbal_0050"
/note="Methyltransferase domain; Region: Methyltransf_11;
pfam08241"
/db_xref="CDD:203885"
gene complement(60679..61302)
/locus_tag="Sbal_0051"
/db_xref="GeneID:4841924"
CDS complement(60679..61302)
/locus_tag="Sbal_0051"
/note="PFAM: cytochrome c, class I;
KEGG: shn:Shewana3_4111 cytochrome c, class I"
/codon_start=1
/transl_table=11
/product="cytochrome c class I"
/protein_id="YP_001048456.1"
/db_xref="GI:126172307"
/db_xref="InterPro:IPR003088"
/db_xref="InterPro:IPR008168"
/db_xref="InterPro:IPR008169"
/db_xref="InterPro:IPR009056"
/db_xref="GeneID:4841924"
/translation="MKKLALALSVVIAAISSPAIAEGNAEAGKTKIIVCSACHGMDGN
SMIDMYPKLAGQHATYLQKQLHDFRSAAQTGGKDGRMDPIMSGMAMPLSDQDILDITA
YFSSQAIQVAEAKDVPELGAKLYKGGDVSRGITACMACHGPDGKGAELAGFPTLAGQH
ANYIKIQLTKFREAGRHNDLNGMMQDVAKKLSDSDIDALSKYLSSLK"
misc_feature complement(60922..61236)
/locus_tag="Sbal_0051"
/note="Cytochrome c553 [Energy production and conversion];
Region: COG2863"
/db_xref="CDD:32690"
misc_feature complement(60682..60972)
/locus_tag="Sbal_0051"
/note="Cytochrome c; Region: Cytochrom_C; cl11414"
/db_xref="CDD:214175"
gene 61471..62130
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/db_xref="GeneID:4843993"
CDS 61471..62130
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="binds guanine nucleotides; in Escherichia coli
depletion results in defective cell division and
filamentation; in Bacillus subtilis this gene is
essential"
/codon_start=1
/transl_table=11
/product="ribosome biogenesis GTP-binding protein YsxC"
/protein_id="YP_001048457.1"
/db_xref="GI:126172308"
/db_xref="InterPro:IPR002917"
/db_xref="GeneID:4843993"
/translation="MTESRIDFRRAKFLISAPDIAHLDQYLPGDVGVEIAFAGRSNAG
KSSALNALTEQKSLARTSKTPGRTQLINVFELDAQRRLVDLPGYGFAQVPLALKNKWQ
QALGEYLQKRACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSA
KMKTVNEVRLALSEFGDWVQVEPFSSLKGTGKPKVLAILNEWCHPQWLTDELDAANNA
E"
misc_feature 61486..62088
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="Predicted GTPase [General function prediction
only]; Region: COG0218"
/db_xref="CDD:30567"
misc_feature 61570..62079
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="YihA (EngB) GTPase family; Region: YihA_EngB;
cd01876"
/db_xref="CDD:206665"
misc_feature 61585..61608
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="G1 box; other site"
/db_xref="CDD:206665"
misc_feature order(61591..61611,61651..61659,61666..61674,61720..61722,
61924..61926,61930..61932,62023..62028)
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206665"
misc_feature 61663..61683
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="Switch I region; other site"
/db_xref="CDD:206665"
misc_feature 61672..61674
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="G2 box; other site"
/db_xref="CDD:206665"
misc_feature 61720..61731
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="G3 box; other site"
/db_xref="CDD:206665"
misc_feature order(61729..61740,61759..61803,61810..61815)
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="Switch II region; other site"
/db_xref="CDD:206665"
misc_feature 61921..61932
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="G4 box; other site"
/db_xref="CDD:206665"
misc_feature 62023..62031
/gene="engB"
/locus_tag="Sbal_0052"
/gene_synonym="yihA; ysxC"
/note="G5 box; other site"
/db_xref="CDD:206665"
gene complement(63394..66159)
/locus_tag="Sbal_0053"
/db_xref="GeneID:4843985"
CDS complement(63394..66159)
/locus_tag="Sbal_0053"
/EC_number="2.7.7.7"
/note="KEGG: shn:Shewana3_4109 DNA polymerase I;
TIGRFAM: DNA polymerase I;
PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease;
3'-5' exonuclease;
SMART: Helix-hairpin-helix domain protein, class 2"
/codon_start=1
/transl_table=11
/product="DNA polymerase I"
/protein_id="YP_001048458.1"
/db_xref="GI:126172309"
/db_xref="InterPro:IPR001098"
/db_xref="InterPro:IPR002298"
/db_xref="InterPro:IPR002421"
/db_xref="InterPro:IPR002562"
/db_xref="InterPro:IPR008918"
/db_xref="GeneID:4843985"
/translation="MPTVAKNPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVN
MLRSLLTRYQPSHIAVVFDAKGKTFRNDMYSEYKAQRPPMPDDLRSQIEPLHRIIRAL
GLPLISISGVEADDVIGTIARQASLENRAVLISTGDKDMAQLVDENVTLINTMTDTIM
GPEEVAIKFGVGPDRIIDLLALMGDKADNIPGLPGVGEKTALAMLTGAGSVSNLLAEP
EKVAELGFRGSKTMAAKIIENADMLKLSYELATIKTDVELEQDWHELTIKPADKDELI
KCYGEMEFKRWLAEVLDNKITANTPIDAASETQEDSTPVEAIATQYDCILTEAELDAW
IAKLKEADLMAVDTETTSLDYMVAELVGISFAVEAGKAAYLPLTHDYVGAPTQINKTV
ALEKLRPLLEDPKLKKVGQNLKYDISILANAGIKLQGVAFDTMLESYVFNSVASRHDM
DGLALKYLGHKNISFEEIAGKGAKQLTFNQIPLETAAPYAAEDADITLRLHQHLWPRL
EKEAELAAMFTEVELPLIQVLSDIERQGVLIDSMLLGQQSDELARKIDTLEEKAYDIA
GEKFNLGSPKQLQVLFFEKLGYPITKKTPKGAPSTAEEVLVELALDFPLPKVILEHRS
LSKLKSTYTDKLPLMVNAKTGRVHTSYHQANAATGRLSSSEPNLQNIPIRTEEGRRIR
QAFIAPDGRKILAADYSQIELRIMAHLSQDAGLLKAFAEGKDIHRATAAEVFGTDFDE
VTTEQRRRAKAVNFGLIYGMSAFGLARQLDIPRHEAQTYIDTYFARYPGVLRYMEETR
AGAADLGYVSTLFGRRLYLPEIRDRNAMRRQGAERAAINAPMQGTAADIIKKAMINIA
QWIKTETQGEITMIMQVHDELVFEVDADKAEALKKTICTLMAQAADLDVELLAEAGIG
NNWDEAH"
misc_feature complement(63397..66144)
/locus_tag="Sbal_0053"
/note="DNA polymerase I; Provisional; Region: PRK05755"
/db_xref="CDD:180237"
misc_feature complement(65665..66135)
/locus_tag="Sbal_0053"
/note="PIN domain of the 5'-3' exonuclease of Taq DNA
polymerase I and homologs; Region: PIN_53EXO; cd09859"
/db_xref="CDD:189029"
misc_feature complement(order(65740..65742,65746..65748,65812..65817,
65821..65823,65971..65973,66121..66123))
/locus_tag="Sbal_0053"
/note="active site"
/db_xref="CDD:189029"
misc_feature complement(order(65746..65748,65815..65817,66121..66123))
/locus_tag="Sbal_0053"
/note="metal binding site 1 [ion binding]; metal-binding
site"
/db_xref="CDD:189029"
misc_feature complement(65917..65955)
/locus_tag="Sbal_0053"
/note="putative 5' ssDNA interaction site; other site"
/db_xref="CDD:189029"
misc_feature complement(order(65812..65814,65821..65823))
/locus_tag="Sbal_0053"
/note="metal binding site 3; metal-binding site"
/db_xref="CDD:189029"
misc_feature complement(order(65740..65742,65746..65748))
/locus_tag="Sbal_0053"
/note="metal binding site 2 [ion binding]; metal-binding
site"
/db_xref="CDD:189029"
misc_feature complement(65404..65643)
/locus_tag="Sbal_0053"
/note="H3TH domain of the 5'-3' exonuclease of Taq DNA
polymerase I and homologs; Region: H3TH_53EXO; cd09898"
/db_xref="CDD:188618"
misc_feature complement(order(65542..65553,65557..65586,65590..65613))
/locus_tag="Sbal_0053"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:188618"
misc_feature complement(order(65596..65598,65605..65607))
/locus_tag="Sbal_0053"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:188618"
misc_feature complement(64567..65151)
/locus_tag="Sbal_0053"
/note="DEDDy 3'-5' exonuclease domain of Escherichia coli
DNA polymerase I and similar bacterial family-A DNA
polymerases; Region: DNA_polA_I_Ecoli_like_exo; cd06139"
/db_xref="CDD:176651"
misc_feature complement(order(64681..64683,64693..64695,64762..64767,
64810..64815,64912..64920,64924..64929,65101..65103,
65110..65121))
/locus_tag="Sbal_0053"
/note="active site"
/db_xref="CDD:176651"
misc_feature complement(order(64681..64683,64693..64695,64912..64914,
65113..65115,65119..65121))
/locus_tag="Sbal_0053"
/note="catalytic site [active]"
/db_xref="CDD:176651"
misc_feature complement(order(64681..64683,64693..64695,64762..64767,
64810..64815,64915..64920,64924..64929,65101..65103,
65110..65118))
/locus_tag="Sbal_0053"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176651"
misc_feature complement(63406..64542)
/locus_tag="Sbal_0053"
/note="Polymerase I functions primarily to fill DNA gaps
that arise during DNA repair, recombination and
replication; Region: DNA_pol_A_pol_I_C; cd08637"
/db_xref="CDD:176474"
misc_feature complement(order(63535..63543,63637..63639,63658..63660,
63910..63912,63922..63924,63982..63984,64066..64071,
64165..64176,64180..64182,64186..64194,64267..64272,
64279..64281,64291..64293))
/locus_tag="Sbal_0053"
/note="active site"
/db_xref="CDD:176474"
misc_feature complement(order(63535..63543,63637..63639,63649..63651,
63658..63663,63886..63888,64165..64176,64180..64182,
64186..64194,64267..64272,64279..64281,64291..64293))
/locus_tag="Sbal_0053"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:176474"
misc_feature complement(order(63535..63537,63910..63912,63922..63924,
63982..63984,64060..64062,64066..64071))
/locus_tag="Sbal_0053"
/note="catalytic site [active]"
/db_xref="CDD:176474"
gene 66547..67209
/locus_tag="Sbal_0054"
/db_xref="GeneID:4845599"
CDS 66547..67209
/locus_tag="Sbal_0054"
/note="PFAM: ThiJ/PfpI domain protein;
KEGG: shn:Shewana3_4108 ThiJ/PfpI domain protein"
/codon_start=1
/transl_table=11
/product="isoprenoid biosynthesis protein with
amidotransferase-like domain"
/protein_id="YP_001048459.1"
/db_xref="GI:126172310"
/db_xref="InterPro:IPR002818"
/db_xref="GeneID:4845599"
/translation="MKKVAVLLSGCGVFDGTEIHESVLTLLCLSKAGAHYQCFAPDIK
QMHVVDHLTGEVDATASRNVLVESARIARGEVKATTELAIAEFDALIIPGGFGAAKNL
CNFATNGSECEVDPLVTDFINEFILAKKPVGFICIAPMMIPRLYPHGVKGTIGNDSDT
VAAFNLMGGEHQVATVHEIVVDEANRIVSTPAYMLAGSIAEAHSGIEKLVAKVLEMTV
AR"
misc_feature 66547..67197
/locus_tag="Sbal_0054"
/note="isoprenoid biosynthesis protein with
amidotransferase-like domain; Provisional; Region:
PRK11780"
/db_xref="CDD:183311"
misc_feature 66556..67197
/locus_tag="Sbal_0054"
/note="Type 1 glutamine amidotransferase (GATase1)-like
domain found in zebrafish ES1; Region: GATase1_ES1;
cd03133"
/db_xref="CDD:153227"
misc_feature 66952..66954
/locus_tag="Sbal_0054"
/note="conserved cys residue [active]"
/db_xref="CDD:153227"
gene complement(67291..68136)
/locus_tag="Sbal_0055"
/db_xref="GeneID:4843892"
CDS complement(67291..68136)
/locus_tag="Sbal_0055"
/note="PFAM: Rhomboid family protein;
KEGG: shn:Shewana3_4107 rhomboid family protein"
/codon_start=1
/transl_table=11
/product="rhomboid family protein"
/protein_id="YP_001048460.1"
/db_xref="GI:126172311"
/db_xref="InterPro:IPR002610"
/db_xref="GeneID:4843892"
/translation="MIEIGRLPNSRAAQAFVDYLKGEHIDCQIEPLEQGVAILVIHDK
DLEQARTEFAHFMAHPYDSKYLQASWEHGDTQTKIDYGAPSLQLFTQFITGAGPVTLI
VFAVCVLIFAAMNLGFANQTYAALSYFGAVPSSEFSQFWRVFTPSLLHFSAMHVIFNL
LWWWYLGGKIETRIGTAPLLILLFVAGTLPNVIQYYVGGPNFGGLSGVVYAVVGYTWV
MGIRKPAAGIDFPPSYMAFMMIWLALGFTDILGVAVANGAHIGGLLIGLAQGLFDSRK
SSSSV"
misc_feature complement(67831..68136)
/locus_tag="Sbal_0055"
/note="Protein of unknown function (DUF3582); Region:
DUF3582; pfam12122"
/db_xref="CDD:204828"
misc_feature complement(67309..68130)
/locus_tag="Sbal_0055"
/note="rhomboid family protease GlpG; Region: rhombo_GlpG;
TIGR04239"
/db_xref="CDD:211962"
misc_feature complement(67399..67722)
/locus_tag="Sbal_0055"
/note="Rhomboid family; Region: Rhomboid; pfam01694"
/db_xref="CDD:201925"
gene complement(68133..68438)
/locus_tag="Sbal_0056"
/db_xref="GeneID:4842523"
CDS complement(68133..68438)
/locus_tag="Sbal_0056"
/note="PFAM: Rhodanese domain protein;
KEGG: shn:Shewana3_4106 rhodanese domain protein"
/codon_start=1
/transl_table=11
/product="rhodanese domain-containing protein"
/protein_id="YP_001048461.1"
/db_xref="GI:126172312"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:4842523"
/translation="MSSFKHLSVNQLLQMTEAQPVQIVDIRDGNSFTNGHIAGATNLN
NENLAQFISQADMDSPLVVVCYHGMSSQNAAQYLCEQGFDDVYSLDGGYSAWHEANA"
misc_feature complement(68145..68423)
/locus_tag="Sbal_0056"
/note="GlpE sulfurtransferase (ST) and homologs are
members of the Rhodanese Homology Domain superfamily.
Unlike other rhodanese sulfurtransferases, GlpE is a
single domain protein but indications are that it
functions as a dimer. The active site contains a...;
Region: GlpE_ST; cd01444"
/db_xref="CDD:29075"
misc_feature complement(68244..68246)
/locus_tag="Sbal_0056"
/note="active site residue [active]"
/db_xref="CDD:29075"
gene complement(68540..69565)
/gene="tdh"
/locus_tag="Sbal_0057"
/db_xref="GeneID:4845107"
CDS complement(68540..69565)
/gene="tdh"
/locus_tag="Sbal_0057"
/EC_number="1.1.1.103"
/note="converts threonine and NAD to
1,2-amino-3-oxobutanoate and NADH; functions in threonine
catabolism"
/codon_start=1
/transl_table=11
/product="L-threonine 3-dehydrogenase"
/protein_id="YP_001048462.1"
/db_xref="GI:126172313"
/db_xref="InterPro:IPR002328"
/db_xref="InterPro:IPR004627"
/db_xref="InterPro:IPR011597"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:4845107"
/translation="MKALSKLKAEKGIWLVDAPKPVMGHNDLLIKIKKTAICGTDMHI
YNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAG
RTHLCRNTSGVGVNREGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSF
DLVGEDVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVSKE
SLKDVMKELGMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKVAMLGIPGGEMAIDWSKV
IFKGLVIKGIYGREMFETWYKMASLIQSGLDISPIITHHFKIDDFQQGFDAMGSGQSG
KVILSWD"
misc_feature complement(68543..69565)
/gene="tdh"
/locus_tag="Sbal_0057"
/note="L-threonine 3-dehydrogenase; Validated; Region:
tdh; PRK05396"
/db_xref="CDD:180054"
misc_feature complement(68552..69565)
/gene="tdh"
/locus_tag="Sbal_0057"
/note="Medium chain reductase/dehydrogenase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR; cl16912"
/db_xref="CDD:211475"
misc_feature complement(order(68702..68710,68777..68782,68846..68851,
68921..68923,68966..68968,68978..68983,69038..69055,
69110..69112,69122..69124,69437..69439,69446..69454))
/gene="tdh"
/locus_tag="Sbal_0057"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:176178"
gene complement(69577..70770)
/locus_tag="Sbal_0058"
/db_xref="GeneID:4842733"
CDS complement(69577..70770)
/locus_tag="Sbal_0058"
/EC_number="2.3.1.29"
/note="catalyzes the formation of 2-amino-3-oxobutanoate
from acetyl-CoA and glycine"
/codon_start=1
/transl_table=11
/product="2-amino-3-ketobutyrate coenzyme A ligase"
/protein_id="YP_001048463.1"
/db_xref="GI:126172314"
/db_xref="InterPro:IPR001085"
/db_xref="InterPro:IPR001917"
/db_xref="InterPro:IPR004839"
/db_xref="InterPro:IPR005814"
/db_xref="InterPro:IPR011282"
/db_xref="GeneID:4842733"
/translation="MASTSFYAQINQQLADIKAEGLYKSERVIASPQQTAIQVNQQEV
INFCANNYLGLANHPELIKAAQQGLDSHGFGMASVRFICGTQDIHKKLEASLSEFLGT
EDTILYSSCFDANAGLFETLLDAEDAIISDALNHASIIDGVRLCKAKRFRYANNDMAD
LETQLIAAKEAGARNILIATDGVFSMDGVIANLKGVCDLADKYGALVMVDDSHAVGFI
GANGRGTHEYCNVMDRVDIITGTLGKALGGASGGFTSGKKEVIDWLRQRSRPYLFSNS
LAPSIVTASIHVLEMLKSGQALREAVWENSRYFREQMSAAGFTLGGADHAIIPVMIGD
AKLAGDFANRLLAEHIYVIGFSFPVVPKGQARIRTQMSAAHTREQLDKAITAFTRIAK
EMGII"
misc_feature complement(69601..70758)
/locus_tag="Sbal_0058"
/note="7-keto-8-aminopelargonate synthetase and related
enzymes [Coenzyme metabolism]; Region: BioF; COG0156"
/db_xref="CDD:30505"
misc_feature complement(69601..70647)
/locus_tag="Sbal_0058"
/note="KBL_like; this family belongs to the pyridoxal
phosphate (PLP)-dependent aspartate aminotransferase
superfamily (fold I). The major groups in this CD
corresponds to serine palmitoyltransferase (SPT),
5-aminolevulinate synthase (ALAS); Region: KBL_like;
cd06454"
/db_xref="CDD:99747"
misc_feature complement(order(69667..69669,70039..70041,70048..70050,
70132..70137,70141..70143,70213..70218,70228..70230,
70363..70365,70435..70443,70621..70623))
/locus_tag="Sbal_0058"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:99747"
misc_feature complement(order(70039..70041,70048..70050,70132..70137,
70141..70143,70216..70218,70228..70230,70363..70365,
70435..70443))
/locus_tag="Sbal_0058"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99747"
misc_feature complement(70039..70041)
/locus_tag="Sbal_0058"
/note="catalytic residue [active]"
/db_xref="CDD:99747"
gene complement(71058..71705)
/locus_tag="Sbal_0059"
/db_xref="GeneID:4844981"
CDS complement(71058..71705)
/locus_tag="Sbal_0059"
/note="PFAM: regulatory protein, TetR;
KEGG: son:SO4675 transcriptional regulator, TetR family"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_001048464.1"
/db_xref="GI:126172315"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:4844981"
/translation="MKTRDKIIYASLELFNEHGERNITTNHIAAHLNMSPGNLYYHFR
NKEDIIRCIFSLYENHLESGFQPYEDKQVDVELLIGYFDAMFYTLWQFRFMYANLADI
LARDEELKKRYLHAQQQVLTRSSHVLHKLKQDGFLHLESDKITPLADTIKMIVSFWIG
YQLTQSSTSTITKATLYEGVLRVLMIFKAYATPTSVATFTRLEQHYHALANQESL"
misc_feature complement(71253..71702)
/locus_tag="Sbal_0059"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature complement(71553..71687)
/locus_tag="Sbal_0059"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
misc_feature complement(71109..71543)
/locus_tag="Sbal_0059"
/note="Bacterial transcriptional repressor; Region: TetR;
pfam13972"
/db_xref="CDD:206142"
gene 71848..73113
/locus_tag="Sbal_0060"
/db_xref="GeneID:4842137"
CDS 71848..73113
/locus_tag="Sbal_0060"
/note="PFAM: Three-deoxy-D-manno-octulosonic-acid
transferase domain protein;
KEGG: shn:Shewana3_4102 coproporphyrinogen oxidase"
/codon_start=1
/transl_table=11
/product="3-deoxy-D-manno-octulosonic-acid transferase"
/protein_id="YP_001048465.1"
/db_xref="GI:126172316"
/db_xref="InterPro:IPR007507"
/db_xref="GeneID:4842137"
/translation="MNRFLYSTILYLLSPLLIVYLAFRAIKSPDYRGRWGERFGLTRL
KSTDLLIHSVSMGETLAAIPLIRLIMQSHPELSITVTTTSPTGSAEVRKAFGDSVQHC
YLPFDLPWCVRRFLRQVSPKWCVIMETELWPNLVAVAAKRGVRLMLANARLSAKSAAQ
YAKHPTLNRPMLQRLDVIAVQTQVEAQRFIELGVSPDRVTVCGSLKFDLSITPERLAN
AKQLRQAWGRETSPIWVAGSVHPGEFDAMLTAHRQLLAQWPDALMIIAPRHPEQFSAV
AEVVASQGFESVRRSGNFPVTATTQVLVGDTMGELLTFYGAADQAFVGGTLIANGGHN
PLEPVAMGVPVMVGPNHWDFAQITQMLADAGGLRIVASADELAANLIAYFAKPELRQQ
AANAGLAVVEANRGALQRQFALVQSLIKS"
misc_feature 71848..73104
/locus_tag="Sbal_0060"
/note="3-deoxy-D-manno-octulosonic-acid transferase;
Reviewed; Region: PRK05749"
/db_xref="CDD:180233"
misc_feature 71938..72480
/locus_tag="Sbal_0060"
/note="3-Deoxy-D-manno-octulosonic-acid transferase
(kdotransferase); Region: Glycos_transf_N; pfam04413"
/db_xref="CDD:203003"
gene complement(73139..73894)
/locus_tag="Sbal_0061"
/db_xref="GeneID:4845830"
CDS complement(73139..73894)
/locus_tag="Sbal_0061"
/note="catalyzes the phosphorylation of
3-deoxy-D-manno-octulosonic acid at the 4-OH position"
/codon_start=1
/transl_table=11
/product="3-deoxy-D-manno-octulosonic-acid kinase"
/protein_id="YP_001048466.1"
/db_xref="GI:126172317"
/db_xref="InterPro:IPR010440"
/db_xref="GeneID:4845830"
/translation="MNAQIQIIKTAQGHMALCQDTPKDIAPAWFAVDFWRAKDAVVGS
SKGRYTTWFVAFEHSHWVLRHYWRGGLMEKFSKDAYVYTGLENTRAMAELRLLNILYH
EDFAVPKPIAANIVRDGLFYRADIIIERVEGAEDLVAKLSKGLMNTEQWQALGATIAQ
FHQRGVYHADLNAKNILFQPAQTAPITPERFYLIDFDRGELKTPSPQWQQSNLDRLLR
SFNKEQGKLPSLAFTADNWSSLMMGYQAAMQSA"
misc_feature complement(73145..73885)
/locus_tag="Sbal_0061"
/note="3-deoxy-D-manno-octulosonic-acid kinase; Reviewed;
Region: PRK01723"
/db_xref="CDD:179326"
misc_feature complement(order(73310..73315,73364..73366,73370..73372,
73490..73492,73502..73513,73571..73573))
/locus_tag="Sbal_0061"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:88273"
gene 73994..75058
/locus_tag="Sbal_0062"
/db_xref="GeneID:4842219"
CDS 73994..75058
/locus_tag="Sbal_0062"
/note="PFAM: glycosyl transferase, family 9;
KEGG: son:SO4678 heptosyl transferase, glycosyltransferase
family 9 protein"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_001048467.1"
/db_xref="GI:126172318"
/db_xref="InterPro:IPR002201"
/db_xref="GeneID:4842219"
/translation="MSLNPNTMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELKITWV
IGKLEYQLLKHLPGIEFVIFDKSQGWRSYFNLRKALKGRRFDVLLHMQVALRATLASL
AISAKVRIGFDRVRAKEGQWLVTNRRVEPLAKPHVLEGFMGFAKAIGVNDLTPQWHIP
VPIADTEFAQTQIKDNEKVFIICAAASKAERNWLPERYAAVASHAIAKGFRVMLCGGP
TQLEKDLAEQILQACPSKIDNLVGKTSLTQLLALLKRASLVLAPDTGPAHMAVTQGTP
VIGLYAHSNPGRTGPYLSQQYVASTYDEAIASQHSGEVKWGIRAKGEHLMALISVEAV
IEKFELVVNDGHVSDDICGY"
misc_feature 74015..75022
/locus_tag="Sbal_0062"
/note="ADP-heptose:LPS heptosyltransferase [Cell envelope
biogenesis, outer membrane]; Region: RfaF; COG0859"
/db_xref="CDD:31200"
misc_feature 74021..75001
/locus_tag="Sbal_0062"
/note="Lipopolysaccharide heptosyltransferase is involved
in the biosynthesis of lipooligosaccharide (LOS).
Lipopolysaccharide (LPS) is a major component of the outer
membrane of gram-negative bacteria. LPS
heptosyltransferase transfers heptose molecules from...;
Region: GT1_LPS_heptosyltransferase; cd03789"
/db_xref="CDD:99964"
misc_feature order(74537..74542,74636..74638,74738..74743,74777..74779,
74786..74791,74798..74800)
/locus_tag="Sbal_0062"
/note="putative active site [active]"
/db_xref="CDD:99964"
gene 75068..76138
/locus_tag="Sbal_0063"
/db_xref="GeneID:4842126"
CDS 75068..76138
/locus_tag="Sbal_0063"
/note="KEGG: saz:Sama_0103 conserved hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048468.1"
/db_xref="GI:126172319"
/db_xref="GeneID:4842126"
/translation="MTVQTSTKFLFIPVSSAEGIGEYMRSMIIADEVKRLWPSAEIKF
ILSQQAPYAAQCPYPAVLLEDTPTKQVKAVNQVMSDYLPDIVLFDASGRKSQLAHAHK
LGAKVIFLSQHKRKRSRGMKIGRALVTDCHWVVQPEFVIGPISWLDRLKLKLINKPAP
LNIGPVFTQPDASTQSALLAQYQLTQNEFVLFNAGSGGHKLNGELAADIFAQAAHESY
KASGITSVMVFGPNYPNPLPELEGVVVIPQLNNQQFINMLAAAKAAVLSGGDTLLQAI
ALRKPTLAVPVSKDQPPRIAKCVSANVALGSVTELDVLNGNIKQLLSSEGIMRLATSL
EKDYKLNGLDLVMKQLERWIRL"
misc_feature <75764..75997
/locus_tag="Sbal_0063"
/note="conserved hypothetical protein; Region: MJ1255;
TIGR00661"
/db_xref="CDD:211595"
gene 76123..77178
/locus_tag="Sbal_0064"
/db_xref="GeneID:4842734"
CDS 76123..77178
/locus_tag="Sbal_0064"
/note="KEGG: rba:RB9243 hypothetical protein-putative
glycosyltransferase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048469.1"
/db_xref="GI:126172320"
/db_xref="GeneID:4842734"
/translation="MDQIVRENLKFILFKKFRGSQVMSVDERVYDYCEFIVDLTKLDE
PRLPGISAILRIKNGAEFLRSSIESHLPYYDEIVACYNDCSDNTAEILKELSEIYPEK
IKVFEYLPKVHPIFSDAHNSSSTDNVHSLANFYNFTLSKVRYNVATKLDDDHIAIDRN
LAPVIDTIRRDILLKVRKIYTFSGVNLALDANGKLGVFQQEPLVGTGDHMYFPVSSKI
YFSQEKDVESFHFVDKNEKKYMGIMYFHLKYLKVGCGFVNLEPKKRAEILTRHLHFAG
VAELDDFISESSIKRLRKHHNPIEYWLRTQHLVNKTIYSVLGRNPPLRIARLSQLYDD
LNGLKLDECVVKRIKRF"
misc_feature <76276..>76668
/locus_tag="Sbal_0064"
/note="Beta-1,4-N-acetylgalactosaminyltransferase (CgtA);
Region: CgtA; pfam06306"
/db_xref="CDD:114995"
gene 77211..77960
/locus_tag="Sbal_0065"
/db_xref="GeneID:4842284"
CDS 77211..77960
/locus_tag="Sbal_0065"
/note="PFAM: glycosyl transferase, family 2;
KEGG: sdn:Sden_0205 glycosyl transferase, family 2"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_001048470.1"
/db_xref="GI:126172321"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:4842284"
/translation="MNKSTVSLVITSCNRFDLLEKTIESFLKYNTYPISQYIVIEDSH
NREKLENTLAKFKGIEFVMVHNEPQLGQMKSIDRAYSLVTSDYIFHCEDDWEFYREGF
IEKSLEVLLSDDKVVTVWLRETNDTNSHTVLPELYFCKNDASLTYRGMHQNDLLHGVY
WHGFTLNPGLRRLADYQLIAPIAQYTSEGGVGNKYYELGFKAAIFPEGSVRHIGYHRG
IRYNADIAKWRKDFNVAFRRFKSKIHKILKV"
misc_feature 77235..>77561
/locus_tag="Sbal_0065"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cd00761"
/db_xref="CDD:132997"
misc_feature order(77241..77243,77247..77249,77328..77330,77481..77483,
77487..77489)
/locus_tag="Sbal_0065"
/note="active site"
/db_xref="CDD:132997"
gene complement(78044..79156)
/locus_tag="Sbal_0066"
/db_xref="GeneID:4841731"
CDS complement(78044..79156)
/locus_tag="Sbal_0066"
/note="PFAM: glycosyl transferase, group 1;
KEGG: pha:PSHAa2452 glycosyl transferase"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_001048471.1"
/db_xref="GI:126172322"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:4841731"
/translation="MSNIYIIYRAMFNLDGTLTTIGGIENYILNLTEVLSLQGWKCHL
VQPAKEPFMFETSHVNVHGVSTGFFRGNLKKFALAKWVQINADKKKDIIIYATDSYAV
NLSGYKQIAIQHGISWDKPRKANNSFIQFTSSLLNHCKYLSYIKNNSTLVCVDHNFIN
WYRTWFNVGNKKVKIIYNFYNEKISNSDFEKKWNNNSEIKIIIARRFVDYRGIDLIAP
IIKRLLPQHKIQVSFAGDGPLKPYLESLFANDSNVDIMQYGPDDSFKVHKEHHIAIIP
TLGSEGTSLSMIEAMAAGCMVLSSNIGGLSNLIIDGYNGSLVMPTSQDMEQALSSALN
NVDLCKKLAKNGLNSITLPCAKDTWSKGWIDVINNQ"
misc_feature complement(78119..79132)
/locus_tag="Sbal_0066"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature complement(78119..79096)
/locus_tag="Sbal_0066"
/note="This family is most closely related to the GT1
family of glycosyltransferases and named after YqgM in
Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to...; Region:
GT1_YqgM_like; cd03801"
/db_xref="CDD:99974"
gene complement(79156..80277)
/locus_tag="Sbal_0067"
/db_xref="GeneID:4843997"
CDS complement(79156..80277)
/locus_tag="Sbal_0067"
/EC_number="5.1.3.14"
/note="PFAM: UDP-N-acetylglucosamine 2-epimerase;
KEGG: saz:Sama_2261 UDP-N-acetylglucosamine 2-epimerase"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylglucosamine 2-epimerase"
/protein_id="YP_001048472.1"
/db_xref="GI:126172323"
/db_xref="InterPro:IPR003331"
/db_xref="GeneID:4843997"
/translation="MKILLVFGTRPEAIKMCPLAKMLATDTQLDVKICVTAQHRHMLD
QVLSIFELKPDYDLDLMKPNQTLEWLTGAIVEGVGKVIKEFQPQIVLVHGDTTTSFSA
ALAAFYQKVDVGHIEAGLRTGDIHSPWPEEANRKLTAVLSKLHFAPTQTAAQNLKNEG
YLPEHIYVTGNTVIDALFETLAFTRKDNYSHPSELSPLFDQLQGKKVILITGHRRENF
GVGFENICTALKTIALSNPNVQLIYPVHLNPQVQKPVYEYLGELDNFHLIEPLDYQSF
VSLMDRADIILTDSGGIQEEAPSLKKPVLVLRDKTERPEAVAAGTVRLVGTDIDKIVS
EITQLIDNPSAFGETINPYGDGQACQRIHKIIKLHYQVD"
misc_feature complement(79168..80277)
/locus_tag="Sbal_0067"
/note="UDP-N-acetylglucosamine 2-epimerase; Region: wecB;
TIGR00236"
/db_xref="CDD:188036"
misc_feature complement(79177..80274)
/locus_tag="Sbal_0067"
/note="Bacterial members of the UDP-N-Acetylglucosamine
(GlcNAc) 2-Epimerase family are known to catalyze the
reversible interconversion of UDP-GlcNAc and
UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to
produce an activated form of ManNAc residues; Region:
GT1_UDP-GlcNAc_2-Epimerase; cd03786"
/db_xref="CDD:99962"
misc_feature complement(order(79390..79392,79402..79404,79450..79452,
79459..79461,79465..79467,80248..80250))
/locus_tag="Sbal_0067"
/note="active site"
/db_xref="CDD:99962"
misc_feature complement(order(79804..79806,79873..79875,79891..79893,
79942..79944,79948..79950,79954..79959,80041..80043,
80062..80067,80071..80073))
/locus_tag="Sbal_0067"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99962"
gene 80574..81065
/gene="coaD"
/locus_tag="Sbal_0068"
/db_xref="GeneID:4842114"
CDS 80574..81065
/gene="coaD"
/locus_tag="Sbal_0068"
/EC_number="2.7.7.3"
/note="Catalyzes the conversion of ATP and pantetheine
4'-phosphate to diphosphate and 3'-dephospho-coA"
/codon_start=1
/transl_table=11
/product="phosphopantetheine adenylyltransferase"
/protein_id="YP_001048473.1"
/db_xref="GI:126172324"
/db_xref="InterPro:IPR001980"
/db_xref="InterPro:IPR004820"
/db_xref="InterPro:IPR004821"
/db_xref="GeneID:4842114"
/translation="MHTRAIYPGTFDPITNGHADLIERAAKLFKHVVIGIAANPSKQP
RFTLEERVELVNRVTAHLDNVEVVGFSGLLVDFAKEQKASVLVRGLRAVSDFEYEFQL
ANMNRRLSPDLESVFLTPAEENSFISSTLVKEVALHGGDVNQFVHSEVATALAAKLKL
AKP"
misc_feature 80577..81026
/gene="coaD"
/locus_tag="Sbal_0068"
/note="phosphopantetheine adenylyltransferase;
Provisional; Region: coaD; PRK00168"
/db_xref="CDD:178911"
misc_feature 80583..81026
/gene="coaD"
/locus_tag="Sbal_0068"
/note="Phosphopantetheine adenylyltransferase; Region:
PPAT; cd02163"
/db_xref="CDD:173914"
misc_feature order(80592..80606,80622..80627,80634..80636,80682..80684,
80697..80699,80787..80795,80835..80840,80844..80846,
80865..80870,80877..80879,80889..80891,80931..80933,
80943..80945,80952..80954)
/gene="coaD"
/locus_tag="Sbal_0068"
/note="active site"
/db_xref="CDD:173914"
misc_feature 80616..80627
/gene="coaD"
/locus_tag="Sbal_0068"
/note="(T/H)XGH motif; other site"
/db_xref="CDD:173914"
gene 81156..82631
/locus_tag="Sbal_0069"
/db_xref="GeneID:4841800"
CDS 81156..82631
/locus_tag="Sbal_0069"
/note="KEGG: shn:Shewana3_4090 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048474.1"
/db_xref="GI:126172325"
/db_xref="GeneID:4841800"
/translation="MKAFLTPTILATSIASGLFFSSILAAAPWVDASDIYLRADIQAL
ADAGVITVPVNTYPLMWSGIGGDLAKVEPELLSPSLVQAYARVNFYYQSAVDNRGNAR
IKVSAASDPARFQHYGSDYREKGEVLGSYEYLGSRVAYKATVAETYDPQDNKNFRLDE
SYFAIILGNWIATLGSVEQWWGPGFDSALHRSNNARPMQSLTLSRNNAAAFETPWLSW
IGPWTFKTGFSLTEVDRAVPKTAEWDMRLSARPIKQLEVGLSWSTLFCGEGQDCNFNF
WWDSVASNSVCLDGTSDCAPEERRDAGHRTQSIDMRYTSSWQDIPVGLYLEHSCENGS
DCGSLWGIDTHFGTSGKQFKLFMEYSDTYVKCDGDSANCFYEDPVYLSGSRYYGRALG
STYDSDAQTFVVGLVGQFSNSRGFTSLLRYAKLNKDGTNVASTWAPQPPKEDLLMLEL
SYRMPVWKGMWSLGGTVSRSEFDVQENDTNATLFSSFEYRF"
misc_feature 81276..82616
/locus_tag="Sbal_0069"
/note="Capsule assembly protein Wzi; Region:
Caps_assemb_Wzi; pfam14052"
/db_xref="CDD:206222"
gene complement(82697..83704)
/locus_tag="Sbal_0070"
/db_xref="GeneID:4844104"
CDS complement(82697..83704)
/locus_tag="Sbal_0070"
/EC_number="5.1.3.12"
/note="PFAM: NAD-dependent epimerase/dehydratase; 3-beta
hydroxysteroid dehydrogenase/isomerase;
dTDP-4-dehydrorhamnose reductase; Male sterility
C-terminal domain;
KEGG: shm:Shewmr7_3979 UDP-glucuronate 5'-epimerase"
/codon_start=1
/transl_table=11
/product="NAD-dependent epimerase/dehydratase"
/protein_id="YP_001048475.1"
/db_xref="GI:126172326"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002225"
/db_xref="InterPro:IPR005913"
/db_xref="InterPro:IPR008089"
/db_xref="InterPro:IPR013120"
/db_xref="GeneID:4844104"
/translation="MKYLVTGAAGFIGAKVSERLCLLGHEVIGIDNLNDYYDVNLKLA
RLDLLQTLDNFHFIKLDLADREGIAALFARHAFQRVIHLAAQAGVRYSLDNPLAYADS
NLIGHLTILEGCRHHKIEHLVYASSSSVYGLNQKMPFSTEDSIDHPISLYAATKKANE
LMSHTYSHLYQLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEVIDVYNHGDLSRDF
TYIDDIVEGIIRVQAKPPSPNTDWTVDAGTPATSSAPYRVFNIGNGSPVQLLDFITAL
EDALGIKANKNFLPMQPGDVHSTWADTSDLFDAVGYKPLVDINTGVAQFVNWYRQFYN
K"
misc_feature complement(82700..83704)
/locus_tag="Sbal_0070"
/note="Nucleoside-diphosphate-sugar epimerases [Cell
envelope biogenesis, outer membrane / Carbohydrate
transport and metabolism]; Region: WcaG; COG0451"
/db_xref="CDD:30800"
misc_feature complement(82709..83704)
/locus_tag="Sbal_0070"
/note="UDP glucuronic acid epimerase, extended (e) SDRs;
Region: UDP_GE_SDE_e; cd05253"
/db_xref="CDD:187563"
misc_feature complement(order(83159..83170,83237..83239,83249..83251,
83324..83332,83399..83401,83450..83458,83606..83614,
83669..83680,83684..83686))
/locus_tag="Sbal_0070"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187563"
misc_feature complement(order(83237..83239,83249..83251,83324..83326,
83396..83398))
/locus_tag="Sbal_0070"
/note="active site"
/db_xref="CDD:187563"
misc_feature complement(order(83057..83059,83081..83083,83117..83119,
83162..83164,83249..83251,83324..83326))
/locus_tag="Sbal_0070"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:187563"
gene complement(83728..84891)
/locus_tag="Sbal_0071"
/db_xref="GeneID:4843822"
CDS complement(83728..84891)
/locus_tag="Sbal_0071"
/note="PFAM: UDP-glucose/GDP-mannose dehydrogenase;
KEGG: son:SO4687 UDP-glucose 6-dehydrogenase"
/codon_start=1
/transl_table=11
/product="UDP-glucose/GDP-mannose dehydrogenase"
/protein_id="YP_001048476.1"
/db_xref="GI:126172327"
/db_xref="InterPro:IPR001732"
/db_xref="GeneID:4843822"
/translation="MKIVVVGMGYVGLSNAVLLAQQNQVTAIDLVPERVKQVNERKST
VVDELIEDYLQNKPLNLTATTENVAFQSADFVIIATPTDYDPQTNYFNTHSVESVIHD
VLAVNPDTTIIIKSTVPVGYTAALRHKFKSDNILFSPEFLREGKALYDNLYPSRIVVG
ERSARAQVFADLLAKAAIKQDIPILLTDSTEAEAIKLFANTFLAMRVAYFNELDTYAE
SRGLNTRQIIEGVSLDPRIGDYYNNPSFGYGGYCLPKDTKQLLANYNDVPNNLISAIV
DSNTTRKDFIADAIISKQPKCVGIYRLIMKADSDNFRASAVQGVMKRIKAKGIEVVVF
EPVLKEDYFFKSRVMRDLTEFKSMCDVIVSNRMVDELNDVADKVYTRDLFNHD"
misc_feature complement(83731..84891)
/locus_tag="Sbal_0071"
/note="UDP-glucose 6-dehydrogenase; Provisional; Region:
PRK15057"
/db_xref="CDD:185017"
misc_feature complement(<84550..84888)
/locus_tag="Sbal_0071"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(84046..84324)
/locus_tag="Sbal_0071"
/note="UDP-glucose/GDP-mannose dehydrogenase family,
central domain; Region: UDPG_MGDP_dh; pfam00984"
/db_xref="CDD:201536"
misc_feature complement(83737..83997)
/locus_tag="Sbal_0071"
/note="UDP binding domain; Region: UDPG_MGDP_dh_C;
smart00984"
/db_xref="CDD:198052"
gene 85100..85810
/locus_tag="Sbal_0072"
/db_xref="GeneID:4842232"
CDS 85100..85810
/locus_tag="Sbal_0072"
/note="PFAM: glycosyl transferase, family 2;
KEGG: she:Shewmr4_3884 glycosyl transferase, family 2"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_001048477.1"
/db_xref="GI:126172328"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:4842232"
/translation="MVIKLWSVELISIVLPAKDEVGNIGHLMEEICQALQGLTEFEIF
VVDDGSQDDTFGEVMRTAAEQQCDAKAIRHERSTAISTGVLHARGKYIVTLDADGQND
PADIPAMFAQLPQIQAEHFCIAGYRKNRKDTAWKRFQSRFANKVRDALLHDGVPDTGC
GLKLIPRETFLRLPYFDHMHRYIPALVRRMGGEIFISVVNHRDRQVGISKYTAWNRRY
YGCDQAWAQSQSRQGCTQ"
misc_feature 85136..85657
/locus_tag="Sbal_0072"
/note="DPM_DPG-synthase_like is a member of the
Glycosyltransferase 2 superfamily; Region:
DPM_DPG-synthase_like; cd04179"
/db_xref="CDD:133022"
misc_feature order(85145..85147,85151..85153,85391..85393)
/locus_tag="Sbal_0072"
/note="Ligand binding site; other site"
/db_xref="CDD:133022"
misc_feature order(85241..85243,85388..85393)
/locus_tag="Sbal_0072"
/note="Putative Catalytic site; other site"
/db_xref="CDD:133022"
misc_feature 85385..85393
/locus_tag="Sbal_0072"
/note="DXD motif; other site"
/db_xref="CDD:133022"
gene 85831..86151
/locus_tag="Sbal_0073"
/db_xref="GeneID:4844192"
CDS 85831..86151
/locus_tag="Sbal_0073"
/note="KEGG: shn:Shewana3_4086 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048478.1"
/db_xref="GI:126172329"
/db_xref="GeneID:4844192"
/translation="MKRLYKAIFIICILLVLILAAQQGLFEHVTDSNWVAHFIADKGR
FTLLVLLAIGALFTAVGGPRQVIAFVFGFALGGIYGGLFSTLAALLGCVLAFYVARLT
IRRC"
gene 86215..86571
/locus_tag="Sbal_0074"
/pseudo
/db_xref="GeneID:4842895"
gene complement(86634..87449)
/locus_tag="Sbal_0075"
/db_xref="GeneID:4842352"
CDS complement(86634..87449)
/locus_tag="Sbal_0075"
/EC_number="3.2.2.23"
/note="Involved in base excision repair of DNA damaged by
oxidation or by mutagenic agents. Acts as DNA glycosylase
that recognizes and removes damaged bases"
/codon_start=1
/transl_table=11
/product="formamidopyrimidine-DNA glycosylase"
/protein_id="YP_001048479.1"
/db_xref="GI:126172330"
/db_xref="InterPro:IPR000191"
/db_xref="InterPro:IPR000214"
/db_xref="InterPro:IPR012319"
/db_xref="GeneID:4842352"
/translation="MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVPDIAKQI
IGQVIRQVRRRAKYLLIDTDAGTSIVHLGMSGSLRILPHDTPVEKHDHIDLVLANGRI
LRFNDPRRFGAWLWCELPEEAHPLLAKLGPEPLTQAFNVAQLAAALAGKKKAIKLCLM
DNHIVVGVGNIYANEALFAAGIHPEAEAGKIDIERLTVLVAEVKQILAHAIKQGGTTL
KDFTNADGKPGYFAQKLHVYGRGGETCTSCGNLLSEIRLGQRTTVFCGICQTR"
misc_feature complement(86637..87449)
/locus_tag="Sbal_0075"
/note="formamidopyrimidine/5-formyluracil/
5-hydroxymethyluracil DNA glycosylase; Validated; Region:
PRK01103"
/db_xref="CDD:179222"
misc_feature complement(87096..87446)
/locus_tag="Sbal_0075"
/note="N-terminal domain of Escherichia coli Fpg1/MutM and
related bacterial DNA glycosylases; Region: EcFpg-like_N;
cd08966"
/db_xref="CDD:176800"
misc_feature complement(order(87117..87128,87180..87185,87225..87233,
87237..87239,87279..87281,87441..87446))
/locus_tag="Sbal_0075"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:176800"
misc_feature complement(87444..87446)
/locus_tag="Sbal_0075"
/note="catalytic residue [active]"
/db_xref="CDD:176800"
misc_feature complement(order(87225..87227,87279..87290,87414..87416,
87423..87428,87432..87443))
/locus_tag="Sbal_0075"
/note="H2TH interface [polypeptide binding]; other site"
/db_xref="CDD:176800"
misc_feature complement(order(87279..87281,87441..87443))
/locus_tag="Sbal_0075"
/note="putative catalytic residues [active]"
/db_xref="CDD:176800"
misc_feature complement(87237..87239)
/locus_tag="Sbal_0075"
/note="turnover-facilitating residue; other site"
/db_xref="CDD:176800"
misc_feature complement(order(87117..87119,87123..87125,87228..87230))
/locus_tag="Sbal_0075"
/note="intercalation triad [nucleotide binding]; other
site"
/db_xref="CDD:176800"
misc_feature complement(87225..87227)
/locus_tag="Sbal_0075"
/note="8OG recognition residue [nucleotide binding]; other
site"
/db_xref="CDD:176800"
misc_feature complement(order(87120..87122,87180..87182))
/locus_tag="Sbal_0075"
/note="putative reading head residues; other site"
/db_xref="CDD:176800"
misc_feature complement(86784..87062)
/locus_tag="Sbal_0075"
/note="Formamidopyrimidine-DNA glycosylase H2TH domain;
Region: H2TH; pfam06831"
/db_xref="CDD:115485"
misc_feature complement(86637..86726)
/locus_tag="Sbal_0075"
/note="Zinc finger found in FPG and IleRS; Region:
zf-FPG_IleRS; pfam06827"
/db_xref="CDD:203527"
gene complement(87485..87940)
/locus_tag="Sbal_0076"
/db_xref="GeneID:4844027"
CDS complement(87485..87940)
/locus_tag="Sbal_0076"
/note="KEGG: shn:Shewana3_4083 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048480.1"
/db_xref="GI:126172331"
/db_xref="GeneID:4844027"
/translation="MALTRKQWNNVIIVACVFMVAVLTFMDNKTNNVPSDAQLLFDDN
APLSQLQLNGIWLHKQASQWECDTTVLNCDEWAKAWQTIRVSPLTAAPETTDNPQELV
IQIADIRDAQLWIYFPNEGALKSPAGNWYLVPPSLRAKLQPILDAKPAA"
gene complement(88030..89013)
/locus_tag="Sbal_0077"
/db_xref="GeneID:4845154"
CDS complement(88030..89013)
/locus_tag="Sbal_0077"
/note="together with moaC, is involved in the conversion
of a guanosine derivative (GXP) into molybdopterin
precursor Z"
/codon_start=1
/transl_table=11
/product="molybdenum cofactor biosynthesis protein A"
/protein_id="YP_001048481.1"
/db_xref="GI:126172332"
/db_xref="InterPro:IPR000385"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR006638"
/db_xref="InterPro:IPR007197"
/db_xref="InterPro:IPR010505"
/db_xref="InterPro:IPR013483"
/db_xref="GeneID:4845154"
/translation="MSLMVDSFGRKVEYLRLSVTDRCDFRCVYCMTEDPCFLPKDHVL
HLEELAWIAQAFTELGVTKIRLTGGEPLVRTDCDQLVSLLGKLPGLTDLSMTTNGSRL
TKFAKPMFAEGLKRLNISLDTLNPTLFTQLTRNGKLDRVIDGIDSAIAAGFERIKINA
VILKQQNDNEVIDLVDFCRGRRLDIAFIEEMPLGEIDERKRARHCSSDEVKAIIESRY
PLQLSNKRTGGPARYYTMADSPIHIGFISPHSHNFCHECNRVRVTVEGQLLLCLGNEH
AVDLKSIVREFPADIERLKAAILTGINLKPKQHDFGNNQVQILRFMNATGG"
misc_feature complement(88033..89013)
/locus_tag="Sbal_0077"
/note="molybdenum cofactor biosynthesis protein A;
Provisional; Region: PRK13361"
/db_xref="CDD:184000"
misc_feature complement(<88498..88965)
/locus_tag="Sbal_0077"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature complement(order(88531..88533,88654..88656,88720..88728,
88804..88809,88813..88815,88924..88929,88933..88935,
88939..88941,88945..88947))
/locus_tag="Sbal_0077"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
misc_feature complement(88084..88467)
/locus_tag="Sbal_0077"
/note="Molybdenum Cofactor Synthesis C; Region:
Mob_synth_C; pfam06463"
/db_xref="CDD:115139"
gene complement(89030..90841)
/locus_tag="Sbal_0078"
/db_xref="GeneID:4844099"
CDS complement(89030..90841)
/locus_tag="Sbal_0078"
/note="TIGRFAM: molybdenum cofactor synthesis domain;
molybdopterin-guanine dinucleotide biosynthesis protein B;
PFAM: molybdopterin binding domain; molybdopterin-guanine
dinucleotide biosynthesis MobB region; MoeA domain
protein, domain I and II; MoeA domain protein, domain IV;
KEGG: shn:Shewana3_4081 molybdopterin-guanine dinucleotide
biosynthesis protein B"
/codon_start=1
/transl_table=11
/product="putative bifunctional molybdopterin-guanine
dinucleotide biosynthesis protein MobB/MoeA"
/protein_id="YP_001048482.1"
/db_xref="GI:126172333"
/db_xref="InterPro:IPR001453"
/db_xref="InterPro:IPR004435"
/db_xref="InterPro:IPR005110"
/db_xref="InterPro:IPR005111"
/db_xref="InterPro:IPR008284"
/db_xref="GeneID:4844099"
/translation="MSNPFVNPLAIPVLGFCAYSGTGKTTLLKQLIPELNQRGLRLAV
IKHAHHNFDVDIPGKDSYEMRKAGARQMLVASHVRWALMTEDARDGDPELVHLLKQIE
ADKVDIVLVEGFKKLALPKIELHRAAHGKPFIYTQDENILAIACCDDTQLPSDALPNE
LRRLDLNNVSQIADFVIEYAQNWEAPLQYPISAVDACTIGDNKNLTVSQGLAQILSHV
SPVAEVEEIDLDALDNRVLASDSISPVDVPQQTNSAMDGYAFVYQDPMPATLKRVGEV
LAGHQYSGTLNAGETVRIMTGATVPVGADTVQPRELAKEVDGNVSFDGRILAGQHVRL
AGEDIARGQVALAKATRLSAAEQGLLGSLGLNRLNVYRRPTVAVFSTGDEVSQPGEAL
KANCIYDSNRFTIKAMAKRLGCDVIDLGIIEDSETALEATLAKAATLADVVISSGGVS
VGDADYIKTVLARLGKIDFWRISMRPGRPLAFGKIGDSLFFGLPGNPVAVMVTFLQFV
QPALRKLAGEVNWQAQLFPAISDETLRSRQGRTEFIRGIYQLGKDGRLHVSSTGNQGS
GMLSSMVKGNCLIIIGDDAEAVNAGETVFIQPFADLL"
misc_feature complement(89033..90838)
/locus_tag="Sbal_0078"
/note="putative bifunctional molybdopterin-guanine
dinucleotide biosynthesis protein MobB/MoeA; Provisional;
Region: PRK14491"
/db_xref="CDD:184707"
misc_feature complement(90311..90811)
/locus_tag="Sbal_0078"
/note="Molybdenum is an essential trace element in the
form of molybdenum cofactor (Moco) which is associated
with the metabolism of nitrogen, carbon and sulfur by
redox active enzymes. In E. coli, the synthesis of Moco
involves genes from several loci: moa; Region: MobB;
cd03116"
/db_xref="CDD:48380"
misc_feature complement(order(90767..90775,90788..90790))
/locus_tag="Sbal_0078"
/note="Walker A motif; other site"
/db_xref="CDD:48380"
misc_feature complement(89045..90211)
/locus_tag="Sbal_0078"
/note="MoeA family. Members of this family are involved in
biosynthesis of the molybdenum cofactor (MoCF), an
essential cofactor of a diverse group of redox enzymes.
MoCF biosynthesis is an evolutionarily conserved pathway
present in eubacteria, archaea and...; Region: MoeA;
cd00887"
/db_xref="CDD:58168"
misc_feature complement(order(89057..89059,89141..89143,89264..89266,
89633..89635,89642..89644,89648..89650,89750..89752,
89756..89761,89768..89770,89774..89785,89828..89830,
90152..90154))
/locus_tag="Sbal_0078"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:58168"
misc_feature complement(order(89498..89500,89570..89572,89690..89692,
89696..89701))
/locus_tag="Sbal_0078"
/note="putative functional site; other site"
/db_xref="CDD:58168"
misc_feature complement(order(89336..89338,89345..89347,89357..89362,
89492..89500))
/locus_tag="Sbal_0078"
/note="putative MPT binding site; other site"
/db_xref="CDD:58168"
gene complement(90875..91465)
/locus_tag="Sbal_0079"
/db_xref="GeneID:4841732"
CDS complement(90875..91465)
/locus_tag="Sbal_0079"
/note="TIGRFAM: molybdopterin-guanine dinucleotide
biosynthesis protein A;
KEGG: son:SO4722 molybdopterin-guanine dinucleotide
biosynthesis protein"
/codon_start=1
/transl_table=11
/product="molybdopterin-guanine dinucleotide biosynthesis
protein MobA"
/protein_id="YP_001048483.1"
/db_xref="GI:126172334"
/db_xref="InterPro:IPR013482"
/db_xref="GeneID:4841732"
/translation="MSSQIDAVILAGGMARRMGGDDKGLVELNGEAMIKHTIDRIKPQ
VKEILINANRNQTRYAEFGFKVISDEHTGFLGPLAGMITAMGQTDADYLLVVPCDCPL
LPTDLVPRMLAAIKAEDAEIAVASDGEYEQPVVLLLKPSLRDSMKAFLEAGERKVDFW
YAKHHFVVESFSDQPNAFVNVNTPEQKQRLAMEITK"
misc_feature complement(90884..91462)
/locus_tag="Sbal_0079"
/note="molybdopterin-guanine dinucleotide biosynthesis
protein MobA; Reviewed; Region: mobA; PRK00317"
/db_xref="CDD:178976"
misc_feature complement(90908..91453)
/locus_tag="Sbal_0079"
/note="MobA catalyzes the formation of molybdopterin
guanine dinucleotide; Region: MobA; cd02503"
/db_xref="CDD:133000"
misc_feature complement(order(91169..91171,91175..91177,91226..91228,
91235..91240,91259..91261,91313..91315,91397..91399,
91424..91426,91430..91438))
/locus_tag="Sbal_0079"
/note="GTP binding site; other site"
/db_xref="CDD:133000"
gene complement(91449..92159)
/locus_tag="Sbal_0080"
/db_xref="GeneID:4841808"
CDS complement(91449..92159)
/locus_tag="Sbal_0080"
/note="PFAM: ABC transporter related;
SMART: AAA ATPase;
KEGG: shn:Shewana3_4079 ABC transporter related"
/codon_start=1
/transl_table=11
/product="ABC transporter-like protein"
/protein_id="YP_001048484.1"
/db_xref="GI:126172335"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:4841808"
/translation="MTKVKLIARDLEMSFGARLLFKADALSLCQGDVIYLQGDNGTGK
STLMKILAGLMAPTKGKIETEGFAKNSWWRRNPLLGKAVYLHQHPYLFDGTVEYNLTY
GLNFSSETKAKAKQRITQAIEMAQLGSLLHARASNLSGGERQRLAIARAWILQPKLLM
LDEPTSNMDKDSQELVLKMIQQLKHEGTGMLLSSHQNCALTSICEQQWHIEGERVTTA
YQHPESLPAQESLYVIAN"
misc_feature complement(91515..92144)
/locus_tag="Sbal_0080"
/note="ABC-type cobalt transport system, ATPase component
[Inorganic ion transport and metabolism]; Region: CbiO;
COG1122"
/db_xref="CDD:31319"
misc_feature complement(91527..92114)
/locus_tag="Sbal_0080"
/note="Domain I of the ABC component of a cobalt transport
family found in bacteria, archaea, and eukaryota. The
transition metal cobalt is an essential component of many
enzymes and must be transported into cells in appropriate
amounts when needed. This ABC...; Region:
ABC_cobalt_CbiO_domain1; cd03225"
/db_xref="CDD:72984"
misc_feature complement(92025..92048)
/locus_tag="Sbal_0080"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72984"
misc_feature complement(order(91575..91577,91671..91676,91899..91901,
92022..92030,92034..92039))
/locus_tag="Sbal_0080"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72984"
misc_feature complement(91899..91910)
/locus_tag="Sbal_0080"
/note="Q-loop/lid; other site"
/db_xref="CDD:72984"
misc_feature complement(91719..91748)
/locus_tag="Sbal_0080"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72984"
misc_feature complement(91671..91688)
/locus_tag="Sbal_0080"
/note="Walker B; other site"
/db_xref="CDD:72984"
misc_feature complement(91653..91664)
/locus_tag="Sbal_0080"
/note="D-loop; other site"
/db_xref="CDD:72984"
misc_feature complement(91569..91589)
/locus_tag="Sbal_0080"
/note="H-loop/switch region; other site"
/db_xref="CDD:72984"
gene complement(92163..92870)
/locus_tag="Sbal_0081"
/db_xref="GeneID:4842739"
CDS complement(92163..92870)
/locus_tag="Sbal_0081"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: she:Shewmr4_3875 binding-protein-dependent transport
systems inner membrane component"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport system inner
membrane protein"
/protein_id="YP_001048485.1"
/db_xref="GI:126172336"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:4842739"
/translation="MSDGWLALLQQALSLLFSLDPDVWSIISISFSVSFAALLITLVP
SMVLGFVLAFAPFRGKWIVTNLVQTLQSIPTVVIGLLVYLLLTRNGPLGDLKWLFTQE
GMILGQMLICAPVLIAMSQAAFTSVDRRAWETSRTLGASWCRAVWTVCRELRMPLLLA
IVAAFSRILTEVGCSMMVGGNILNVTRNIPTAIALETSKGDFAQAIALGLVLLILALI
LNFALGGLRGKAMPRSH"
misc_feature complement(92265..92765)
/locus_tag="Sbal_0081"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(92265..92270,92298..92303,92340..92345,
92352..92363,92382..92384,92391..92396,92433..92435,
92484..92486,92493..92498,92508..92510,92514..92519,
92526..92528,92532..92534,92538..92543,92622..92624,
92628..92633,92640..92669,92673..92684,92712..92714,
92727..92732,92739..92744))
/locus_tag="Sbal_0081"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(92346..92363,92622..92666))
/locus_tag="Sbal_0081"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(92268..92270,92298..92300,92307..92309,
92343..92345,92556..92558,92622..92624))
/locus_tag="Sbal_0081"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(92415..92417,92424..92429,92445..92483))
/locus_tag="Sbal_0081"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(92867..93691)
/locus_tag="Sbal_0082"
/db_xref="GeneID:4845529"
CDS complement(92867..93691)
/locus_tag="Sbal_0082"
/note="KEGG: shn:Shewana3_4077 extracellular
solute-binding protein, family 1"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein"
/protein_id="YP_001048486.1"
/db_xref="GI:126172337"
/db_xref="GeneID:4845529"
/translation="MLNMKSHIKSLLGLIVAASMFTVLPAHSTEVIKLATTTSTENSG
LLKELLPKFESESGYKVQVIATGTGKALKLGEQGDVDLVMTHAPSAEAKFVADGFGVE
PRGIMENDFVVLGPKNDPAKIRDSKNAEEAFAKIAKSGVPFISRGDNSGNHIKELEVW
KAASVTPDFKGYTSVGQGMGKTLLMANEMQGYTLSDRGTFVAYKTKLDLGVDFDGGKT
LANPYQVILINSAKYPDLNHKGAKAFSDWLISKEGQSMINNFKVDGEQLFKATYSE"
misc_feature complement(92876..93649)
/locus_tag="Sbal_0082"
/note="ABC-type tungstate transport system, permease
component [Coenzyme metabolism]; Region: TupB; COG2998"
/db_xref="CDD:32816"
misc_feature complement(92936..93592)
/locus_tag="Sbal_0082"
/note="PBP superfamily domain; Region: PBP_like_2;
pfam12849"
/db_xref="CDD:205106"
misc_feature complement(order(93161..93166,93170..93184,93497..93514,
93530..93532,93539..93544,93548..93553))
/locus_tag="Sbal_0082"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 93928..95358
/locus_tag="Sbal_0083"
/db_xref="GeneID:4844953"
CDS 93928..95358
/locus_tag="Sbal_0083"
/note="PFAM: response regulator receiver; sigma-54 factor,
interaction domain-containing protein; helix-turn-helix,
Fis-type; ATPase associated with various cellular
activities, AAA_5;
SMART: AAA ATPase;
KEGG: shm:Shewmr7_3966 two component, sigma54 specific,
transcriptional regulator, fis family"
/codon_start=1
/transl_table=11
/product="two component, sigma54 specific, Fis family
transcriptional regulator"
/protein_id="YP_001048487.1"
/db_xref="GI:126172338"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR002197"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011704"
/db_xref="GeneID:4844953"
/translation="MLELVANESKCPEADNMSQIDNNLKPLPSAVSVLIVDDEPGMRS
FLNKALSKKFALVETAGSIEDAEQLRSRCHFDLLIVDIRLPGRSGIEWHEALDEQGRR
SDIIFMTGYADMEVAITALRAGASDFIMKPFHLEQMMTAVDRCIERRLLKRENLMLRR
EVSIGYSSTIIGSSEAMKSVKHIIERVAPTNAVVLIQGESGTGKELVARQLHLLSGRQ
GPFVPVNCGSIAPELLESELFGHTAGAFTGAKGNREGLFSFASGGTIFLDEIGEMPLK
MQTALLRVLEQKAIRPVGSEKEVNIDVRVIAATNRTLIDEVDAGNFRRDLYYRLNVLD
ILIPPLRDRPEDVVELTHHFTRQLAAELGVREVVWSHEDMVKLQQHEWPGNIRELRNM
IERCILLGKPPAEYWKQQLKSESLSTSGYPLDWPLKEVEKHHVTSVVDLHSGNKSAAA
RDLGVSRKTLDRKYKEWFDFSGDQES"
misc_feature 94021..95328
/locus_tag="Sbal_0083"
/note="Response regulator containing CheY-like receiver,
AAA-type ATPase, and DNA-binding domains [Signal
transduction mechanisms]; Region: AtoC; COG2204"
/db_xref="CDD:32386"
misc_feature 94027..94365
/locus_tag="Sbal_0083"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(94036..94041,94168..94170,94192..94194,94252..94254,
94309..94311,94318..94323)
/locus_tag="Sbal_0083"
/note="active site"
/db_xref="CDD:29071"
misc_feature 94168..94170
/locus_tag="Sbal_0083"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(94177..94182,94186..94194)
/locus_tag="Sbal_0083"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 94318..94326
/locus_tag="Sbal_0083"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 94450..94944
/locus_tag="Sbal_0083"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 94519..94542
/locus_tag="Sbal_0083"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(94522..94545,94729..94731,94855..94857)
/locus_tag="Sbal_0083"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 94717..94734
/locus_tag="Sbal_0083"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 94912..94914
/locus_tag="Sbal_0083"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 95206..95328
/locus_tag="Sbal_0083"
/note="Bacterial regulatory protein, Fis family; Region:
HTH_8; pfam02954"
/db_xref="CDD:202485"
gene 95360..97513
/locus_tag="Sbal_0084"
/db_xref="GeneID:4843421"
CDS 95360..97513
/locus_tag="Sbal_0084"
/note="PFAM: ATP-binding region, ATPase domain protein
domain protein; histidine kinase, HAMP region domain
protein; histidine kinase A domain protein domain protein;
KEGG: shn:Shewana3_4075 ATP-binding region, ATPase domain
protein domain protein"
/codon_start=1
/transl_table=11
/product="integral membrane sensor signal transduction
histidine kinase"
/protein_id="YP_001048488.1"
/db_xref="GI:126172339"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:4843421"
/translation="MSFFTHFFGVSWQQMQAKVRYRILILTLLPILLTLVSLVFITIY
WNISYTGKQLFMKVKADLSVAENTLQQVQVRQEKQLERVVTSWTFQNDFRPLFSGKEL
TGEVIHRASLDAFLLEQKKQLNLDYLRLVTVAEAAADPDLRQILPKINGLLPYSGLMV
LPPERLSRIDPELAVTASIPIVATLRAQSPTKTVEERGLLSRSLLPVPDMQGKVAWYL
DGGILFNRDIRIVDHIRDLVYDKGTLPERSIGTVTIFLDNIRISTNVPLHFYPTGNET
QGRALGSLVSEEVKEKVLTQGEQWVDRAFVFNDWFISAYAPLEDIRGQRVGMIYTGFS
ESPFIHNYLLNIIELGTILMLVLLVSGLLVYRGAYSLLQPIERIHHVVQAVQSGRNIR
IGALGLDRDNELSNLAEQFDSMLDLLQRRNAQIQAAAEQLEMKVEERTRSLQDKTLEL
QRNVALLNETRQQLVTNEKLTALGELTAGIAHEINNPTAVILGNMELLRYELGDNAEV
VKEEIDLVIQQVGRISTIIRSLLQYSRPGEFNAPLEMHPITPIIEEMLVLVRHSIQKQ
EVVLITELNASCPVQVNRPQLLQVLINLVVNAAHAMDGKGRIWVRTYDWVQQDMPIGV
KIEVEDEGSGIAPEQLGRIFDPFYTTRKDGTGLGLSLSYGIIKRIGGTIEVSSTLGKG
TLFTIGLYHEAKEDQQNNPYEGLHIAGNDSDMSAD"
misc_feature 96452..97426
/locus_tag="Sbal_0084"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature <96452..96619
/locus_tag="Sbal_0084"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cl01054"
/db_xref="CDD:198627"
misc_feature 96767..96964
/locus_tag="Sbal_0084"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(96785..96787,96797..96799,96809..96811,96818..96820,
96830..96832,96839..96841,96893..96895,96905..96907,
96914..96916,96926..96928,96935..96937,96947..96949)
/locus_tag="Sbal_0084"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 96803..96805
/locus_tag="Sbal_0084"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 97157..97420
/locus_tag="Sbal_0084"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(97241..97243,97247..97249,97253..97255,97259..97264,
97325..97336,97382..97384,97388..97390,97403..97408,
97412..97414)
/locus_tag="Sbal_0084"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature order(97253..97255,97259..97261,97325..97327,97331..97333)
/locus_tag="Sbal_0084"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(97864..98322)
/locus_tag="Sbal_0085"
/db_xref="GeneID:4844715"
CDS complement(97864..98322)
/locus_tag="Sbal_0085"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: she:Shewmr4_3871 acetyltransferase, GNAT family"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_001048489.1"
/db_xref="GI:126172340"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:4844715"
/translation="MYSIEIKAESGLTPELATQLIQLSQQIPELDRPLTSEVLNQRLQ
GKKCLILVAYVEGELAGFKMGYEQEEAIFYSWLGGVASDFRRLGLAQSLLKYQETWAR
RQGYNHIQVKTMNRFPAMLNLLISNQYLITELNADPKSLVDHKLHLRKSI"
misc_feature complement(97990..98175)
/locus_tag="Sbal_0085"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature complement(order(98050..98055,98083..98088))
/locus_tag="Sbal_0085"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(98423..99082)
/locus_tag="Sbal_0086"
/db_xref="GeneID:4842729"
CDS complement(98423..99082)
/locus_tag="Sbal_0086"
/note="TIGRFAM: conserved hypothetical integral membrane
protein;
PFAM: protein of unknown function DUF165;
KEGG: son:SO4715 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048490.1"
/db_xref="GI:126172341"
/db_xref="InterPro:IPR003744"
/db_xref="GeneID:4842729"
/translation="MLMLTTAQLRRALFLLVGFHILIICVSNYLVQLPFQLFGYHTTW
GAFSFPFVYLATDLTVRIFGQQAARSIILKAMVPALMISYVMGVVFHQGSFQGADSLA
EWNTFVFRIAFASFAAYLIGQLMDIKVFARLRMSRSWWVAPAASTLVGNLVDTLVFFS
IAFYASSDSFMAANWPEIATVDYGFKLIVSLGLFLPAYGVLLKVLQDKILRTNPQESI
S"
misc_feature complement(98453..99082)
/locus_tag="Sbal_0086"
/note="hypothetical protein; Provisional; Region:
PRK11212"
/db_xref="CDD:183041"
gene 99315..100055
/locus_tag="Sbal_0087"
/db_xref="GeneID:4843419"
CDS 99315..100055
/locus_tag="Sbal_0087"
/note="KEGG: she:Shewmr4_3869 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048491.1"
/db_xref="GI:126172342"
/db_xref="GeneID:4843419"
/translation="MRRFFAIFCLLLAVLPVSICAAQPIVVNVATASWDDFANRDETG
YYFELLQRVFPEPEWQLKVQFMPFARSLYLVEHNRTDITLSVYKGDTKKALLTENTVE
VDSIYVAVTAELAATWTGLESLSHKRVQAMLAYRYNMLTPVPMYYEESSDMLTMLNSL
NAGRIDAVLDYKSNLLMYVPKLKAPQNFVIIQGVLKAETYFAFANTEKGQMLKHHFDL
AHKRLIDSGEQDRLYLETLEKRRVDGEK"
misc_feature 99315..100013
/locus_tag="Sbal_0087"
/note="ABC-type amino acid transport/signal transduction
systems, periplasmic component/domain [Amino acid
transport and metabolism / Signal transduction
mechanisms]; Region: HisJ; COG0834"
/db_xref="CDD:31176"
misc_feature 99441..100013
/locus_tag="Sbal_0087"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cl15306"
/db_xref="CDD:199164"
misc_feature order(99516..99518,99582..99584,99825..99827)
/locus_tag="Sbal_0087"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29040"
misc_feature order(99765..99767,99777..99779,99804..99806)
/locus_tag="Sbal_0087"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:29040"
misc_feature 99903..99920
/locus_tag="Sbal_0087"
/note="hinge residues; other site"
/db_xref="CDD:29040"
gene complement(100068..101426)
/locus_tag="Sbal_0088"
/db_xref="GeneID:4842915"
CDS complement(100068..101426)
/locus_tag="Sbal_0088"
/note="TIGRFAM: isochorismate synthases;
PFAM: Anthranilate synthase component I and chorismate
binding protein;
KEGG: she:Shewmr4_3868 isochorismate synthases"
/codon_start=1
/transl_table=11
/product="isochorismate synthase"
/protein_id="YP_001048492.1"
/db_xref="GI:126172343"
/db_xref="InterPro:IPR004561"
/db_xref="InterPro:IPR005801"
/db_xref="GeneID:4842915"
/translation="MPVHALSEDLKSLIDKLIQLKQVPPTEPIVQLSLNTVAMPLISW
LASQTQFPRIYWHGRDRIEEVAAIGACKDFRFETGINDQQLAMAYQEQRALSTNQNIR
YYGGVAFDRTIESWPEFGNSRFILPRIEFRRSGSKFSLLVNLNFAENDHHSEIDKAIA
AIEAVMPAKPLSPPKKIVPLGRSDKPDFERWKTLVEQVVEPKFNQDTPKVVLSRLTQL
EVNEPIDPWMVMACWQGRNPNSFQFGFQFSPERTFISCSPERLFRRRQQELFTEALAG
TTVRGLSQEEDIALANALLEDNKNSVENQLVRSHIVNMLTPLSNYVGADELATIFKLN
HIQHLHRAIRAELKPGVNDFQLLQALHPTPAVGGLPRHSALNFIRQREGYTRGWYAGA
CGYFNKYESEFSVAIRSALFEPGRINLFAGAGIIAGSEPEAEWQELENKLATIMSILF
EM"
misc_feature complement(100080..101336)
/locus_tag="Sbal_0088"
/note="Isochorismate synthase [Coenzyme metabolism /
Secondary metabolites biosynthesis, transport, and
catabolism]; Region: MenF; COG1169"
/db_xref="CDD:31363"
misc_feature complement(100080..101126)
/locus_tag="Sbal_0088"
/note="chorismate binding enzyme; Region: Chorismate_bind;
cl10555"
/db_xref="CDD:209166"
gene 101851..103974
/locus_tag="Sbal_0089"
/db_xref="GeneID:4842728"
CDS 101851..103974
/locus_tag="Sbal_0089"
/note="PFAM: TonB-dependent receptor; TonB-dependent
receptor, plug;
KEGG: she:Shewmr4_3867 TonB-dependent receptor, plug"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor, plug"
/protein_id="YP_001048493.1"
/db_xref="GI:126172344"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR012910"
/db_xref="GeneID:4842728"
/translation="MITTNTLFRVSSLALAIGLSFTVQADEIARDPRLNINEVIVVHG
DGGEASEMATTHWSISEEEIRATGAQSLDQVLKNVPGVYIRVGGDGTPRVDIRGFKTR
HVTLLVNGVPMSSADDGQFDPSIIPTSQIASVEVSVGPTSVLYGPSGAGGVINIITKQ
GSTAPALAGRLEAGKDNTFNGDISAAGSGDDWQGLVSVSRQQTDGFPMSNDFEPTQYQ
DGELRVNSDKEVTNVYAQGSYWLSDKTQLIANMALRSGEWGKPARDGTGSGKLKFERT
DDYDAHTFQLGLAHQFDDTFTLRGFGYHNQSDTLEASYADETYQAVRLSQDGRSVVQG
VNLQLITDLHTAGLFTTSVIAEKQSWKSVVDTYTPNTGSNNGGTTGSGGGTGTGGGTG
TGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGAENLNDSAWLYTAAAEYQYQSELQY
GFTLGGAYHSLDTTDSTDGNYSAMASSYWQAAQDSRLSLSVARKVRFPSMVNLYSQLS
GNRDLEAEESKHVELGLEQNLPASNDFSLYGYYTDAKNYIAKDVDGFYQNMGRYKFKG
VDFQINNHAIEHLDLSFSYSLLDSEEIDGDDTLDALQYRPRHQLRWQMSYEFPFETQV
HLNVERILDQVYATQVKVGGQTQYQQQSLDNYTLVDVNLVQPLIRDKLDVYLRATNLL
DENYYQSEALPQAGRQIFIGVNWQI"
misc_feature 102022..102309
/locus_tag="Sbal_0089"
/note="TonB-dependent Receptor Plug Domain; Region: Plug;
pfam07715"
/db_xref="CDD:203737"
misc_feature <103150..103968
/locus_tag="Sbal_0089"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
misc_feature <103177..103968
/locus_tag="Sbal_0089"
/note="Outer membrane cobalamin receptor protein [Coenzyme
metabolism]; Region: BtuB; COG4206"
/db_xref="CDD:33936"
gene 103976..105346
/locus_tag="Sbal_0090"
/db_xref="GeneID:4845430"
CDS 103976..105346
/locus_tag="Sbal_0090"
/note="PFAM: ABC transporter related;
SMART: AAA ATPase;
KEGG: shm:Shewmr7_3959 ABC transporter related"
/codon_start=1
/transl_table=11
/product="ABC transporter-like protein"
/protein_id="YP_001048494.1"
/db_xref="GI:126172345"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:4845430"
/translation="MKLLALEGVSFNYGSQLPTVLQEVNLAIGTGQCHCVSGPTGSGK
SSLLNLLAGVLNRPHEGHIWRYPQLVTGLVMQDPQTQLLRQTVGAEVAFALENLGIPA
EQMLPKVQLALRRVGLYLRLDTQVSTLSLGQKYRLMIAAQLVCEPHLLLLDEPWAQLD
DHGVSELLVVLRNLIQDGMALVLVEHNASAFAEIIQHYWQLEAGKLSEGIYTVTDAPQ
TEAPAWRNQPKFEHLGKVLVSAEAFEFGFDACPTLFACPQGFQLQAGEIVTLVGDNGS
GKTSLLKTIAGVLSSRQRLPLKVLGRRPKLGIYGAELGLLMQRPSRQLFETSVLAEMQ
FSLRRFELPKERAAQMLDELDLFSLAQLSPHKLSYGQQHLIALASLACLRPKVLLLDD
PLAGMDKHYYGKVWYLLKRLSSQGCAILLSSHRSIEHSAVSRQLSLRNGLLVEELIET
GERYVG"
misc_feature 103976..104593
/locus_tag="Sbal_0090"
/note="ABC-type cobalt transport system, ATPase component
[Inorganic ion transport and metabolism]; Region: CbiO;
COG1122"
/db_xref="CDD:31319"
misc_feature 103991..104590
/locus_tag="Sbal_0090"
/note="Domain I of the ABC component of a cobalt transport
family found in bacteria, archaea, and eukaryota. The
transition metal cobalt is an essential component of many
enzymes and must be transported into cells in appropriate
amounts when needed. This ABC...; Region:
ABC_cobalt_CbiO_domain1; cd03225"
/db_xref="CDD:72984"
misc_feature 104087..104110
/locus_tag="Sbal_0090"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72984"
misc_feature order(104096..104101,104105..104113,104201..104203,
104432..104437,104531..104533)
/locus_tag="Sbal_0090"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72984"
misc_feature 104192..104203
/locus_tag="Sbal_0090"
/note="Q-loop/lid; other site"
/db_xref="CDD:72984"
misc_feature 104360..104389
/locus_tag="Sbal_0090"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72984"
misc_feature 104420..104437
/locus_tag="Sbal_0090"
/note="Walker B; other site"
/db_xref="CDD:72984"
misc_feature 104444..104455
/locus_tag="Sbal_0090"
/note="D-loop; other site"
/db_xref="CDD:72984"
misc_feature 104519..104539
/locus_tag="Sbal_0090"
/note="H-loop/switch region; other site"
/db_xref="CDD:72984"
misc_feature 104753..105298
/locus_tag="Sbal_0090"
/note="Domain I of the ABC component of a cobalt transport
family found in bacteria, archaea, and eukaryota. The
transition metal cobalt is an essential component of many
enzymes and must be transported into cells in appropriate
amounts when needed. This ABC...; Region:
ABC_cobalt_CbiO_domain1; cd03225"
/db_xref="CDD:72984"
misc_feature 104753..105247
/locus_tag="Sbal_0090"
/note="cobalt transport protein ATP-binding subunit;
Region: cbiO; TIGR01166"
/db_xref="CDD:130234"
misc_feature 104789..104812
/locus_tag="Sbal_0090"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72984"
misc_feature order(104798..104803,104807..104815,104927..104929,
105146..105151,105245..105247)
/locus_tag="Sbal_0090"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72984"
misc_feature 104918..104929
/locus_tag="Sbal_0090"
/note="Q-loop/lid; other site"
/db_xref="CDD:72984"
misc_feature 105074..105103
/locus_tag="Sbal_0090"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72984"
misc_feature 105134..105151
/locus_tag="Sbal_0090"
/note="Walker B; other site"
/db_xref="CDD:72984"
misc_feature 105158..105169
/locus_tag="Sbal_0090"
/note="D-loop; other site"
/db_xref="CDD:72984"
misc_feature order(105233..105250,105254..105256)
/locus_tag="Sbal_0090"
/note="H-loop/switch region; other site"
/db_xref="CDD:72984"
gene 105336..106016
/locus_tag="Sbal_0091"
/db_xref="GeneID:4843304"
CDS 105336..106016
/locus_tag="Sbal_0091"
/note="PFAM: cobalt transport protein;
KEGG: she:Shewmr4_3865 cobalt transport protein"
/codon_start=1
/transl_table=11
/product="cobalt transport protein"
/protein_id="YP_001048495.1"
/db_xref="GI:126172346"
/db_xref="InterPro:IPR003339"
/db_xref="GeneID:4843304"
/translation="MWASCRRLRALRHWSYERRETALCALSLLLVCVLSACAFVLPAA
LLLPLAGLNGLLVIHGLLRRGSIWGVLKLGLVQLSITLSLYLILYGVEHLAQGAVVVT
RIILATIPGWWLCITTAPERIGEVLSAFLPTKWAFVVAASLSLLPYMADEIREIYQIQ
CLRGARITPKALRNPKNWSELVYCVLFPVLIQLLKLSRQMAVAAQCRHFGLAQRPTHW
HSPRDKND"
misc_feature <105615..105992
/locus_tag="Sbal_0091"
/note="ABC-type cobalt transport system, permease
component CbiQ and related transporters [Inorganic ion
transport and metabolism]; Region: CbiQ; COG0619"
/db_xref="CDD:30964"
gene 106009..106551
/locus_tag="Sbal_0092"
/db_xref="GeneID:4843213"
CDS 106009..106551
/locus_tag="Sbal_0092"
/note="KEGG: shm:Shewmr7_3957 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048496.1"
/db_xref="GI:126172347"
/db_xref="GeneID:4843213"
/translation="MTKKIPLSLQDSLFVGFCATLLVALTGMLRLKLGLSGHSMFLMS
FFYLICYGVLGRFGSMTACGVIAGIVAMALGVGKGGPMILLKFALPAIAMDLVALLLP
LSMNLHWRCVILGIAGCIAWAGKVALTNMLAGMALDVVMIQWGLSVLKGGFFATLGAL
LVPPVLTRLKAHDLLHRDKF"
gene 106581..107033
/locus_tag="Sbal_0093"
/db_xref="GeneID:4845057"
CDS 106581..107033
/locus_tag="Sbal_0093"
/note="KEGG: she:Shewmr4_3863 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048497.1"
/db_xref="GI:126172348"
/db_xref="GeneID:4845057"
/translation="MKNWLICIDDTDDIGTKGTGEIAEEIAHLLANMSGGHASFVTRH
QLFVHPDIPYTSHNSAMCFALRSPLTQAEIHQHAVAHLVAESAPAADPGIAILDVDSY
YDAAALMDFGRRAKVEVITKAAAYDLAEQLNIQLTEHGGTGQGVLLVR"
gene 107054..107320
/locus_tag="Sbal_0094"
/db_xref="GeneID:4845195"
CDS 107054..107320
/locus_tag="Sbal_0094"
/note="KEGG: shm:Shewmr7_3956 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048498.1"
/db_xref="GI:126172349"
/db_xref="GeneID:4845195"
/translation="MGSDGRVKGQIKLGQFEDVSLELSVADILEQTGLDAVMSTDKYR
LALDERVQLKGKVKAVYLDHQFVLLVHQETEQWRNAGKQALQAY"
misc_feature <107105..>107230
/locus_tag="Sbal_0094"
/note="N-acetylmuramoyl-L-alanine amidase [Cell envelope
biogenesis, outer membrane]; Region: AmiC; COG0860"
/db_xref="CDD:223929"
gene 107359..107598
/locus_tag="Sbal_0095"
/db_xref="GeneID:4841407"
CDS 107359..107598
/locus_tag="Sbal_0095"
/note="KEGG: shm:Shewmr7_3955 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048499.1"
/db_xref="GI:126172350"
/db_xref="GeneID:4841407"
/translation="MDLNLVEHAFELKDDRWIFKAGLAQYPQARQVAKLCTRFIPDDE
DEQIDDEPRSCYNCQYRRWMVAGFECLALRHLLKK"
gene 107832..109022
/locus_tag="Sbal_0096"
/db_xref="GeneID:4842890"
CDS 107832..109022
/locus_tag="Sbal_0096"
/note="PFAM: metal-dependent phosphohydrolase, HD sub
domain;
SMART: metal-dependent phosphohydrolase, HD region;
KEGG: son:SO4711 HD domain protein"
/codon_start=1
/transl_table=11
/product="metal dependent phosphohydrolase"
/protein_id="YP_001048500.1"
/db_xref="GI:126172351"
/db_xref="InterPro:IPR003607"
/db_xref="InterPro:IPR006674"
/db_xref="GeneID:4842890"
/translation="MSESAESVELIKLPVSQLTLGMFVSAIDKNDKGQLAIANAGQIK
HKDAILKLAKSGIKFVWVDAERSAEHCGLKKKTTNDSQTDNRKAPVSRDKQQAQAKVM
LTEAKDLIRKVLSETFEGKAIEVAPFEALADTMIESVMLDADALKCMSALRSKDAYLL
EHSVNVAFLLVTFGKYLQLDRDMLRQMAVGGILHDIGKIKVDNKVLHKPGKLTPEEFE
HMKLHQVYELEIMNETTGLSQISKDICLMHHEKLDGRGYPRGLKDDEIPRHGRMSCIV
DIFDALTATRCYKEAMSPAAAFKILLSLTPFHLDQQLVYEFIRCIGIYPVGSLVELSD
GRIGIVWASKDRDALHPIVKCFYSLKVKRYTDVAMVDLLKSELYIERGVSPSSLDIDP
TPFY"
misc_feature 107856..108221
/locus_tag="Sbal_0096"
/note="Domain of unknown function (DUF3391); Region:
DUF3391; pfam11871"
/db_xref="CDD:152307"
misc_feature 107967..108893
/locus_tag="Sbal_0096"
/note="c-di-GMP phosphodiesterase class II (HD-GYP domain)
[Signal transduction mechanisms]; Region: COG2206"
/db_xref="CDD:32388"
misc_feature 108303..108698
/locus_tag="Sbal_0096"
/note="Metal dependent phosphohydrolases with conserved
'HD' motif; Region: HDc; cd00077"
/db_xref="CDD:28958"
misc_feature order(108315..108317,108411..108416,108660..108662)
/locus_tag="Sbal_0096"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:28958"
misc_feature 108414..108416
/locus_tag="Sbal_0096"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28958"
gene 109135..109770
/locus_tag="Sbal_0097"
/db_xref="GeneID:4841935"
CDS 109135..109770
/locus_tag="Sbal_0097"
/note="PFAM: Paraquat-inducible protein A;
KEGG: shm:Shewmr7_3953 paraquat-inducible protein A"
/codon_start=1
/transl_table=11
/product="paraquat-inducible protein A"
/protein_id="YP_001048501.1"
/db_xref="GI:126172352"
/db_xref="InterPro:IPR007498"
/db_xref="GeneID:4841935"
/translation="MNSAMKSLFPIFIILLSLALLIPGVTQPILSISGTIDKAKLTEQ
GIEQVAQRFDEDSGRDSARGMLSMVSGLLGLNSLKGEVEVLQKTRSIWGTVTELYHSG
NGLVAGLVMLFSVVVPALKLSLMLAQQCVSSIGLKLRINAVVNALAKWSMADVFVVAL
IITFMAGNASGGMGEMLKTQAQFENGFYFFTAYCILSILSGFLVRRPTPIL"
misc_feature 109375..109734
/locus_tag="Sbal_0097"
/note="Paraquat-inducible protein A; Region: PqiA;
pfam04403"
/db_xref="CDD:203002"
STS 109433..110437
/standard_name="D1S3695"
/db_xref="UniSTS:474273"
gene complement(109845..110150)
/locus_tag="Sbal_0098"
/db_xref="GeneID:4843827"
CDS complement(109845..110150)
/locus_tag="Sbal_0098"
/note="KEGG: shn:Shewana3_4067 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048502.1"
/db_xref="GI:126172353"
/db_xref="GeneID:4843827"
/translation="MSTEQLLVLIAQNDIKDDIVDTLIELEFLSGFSLGNICGFSREH
SHFNIKEQVEGYREFCKFEIMHPAAQQAALLTALALVCKHNPCRYWIMPIYQNGTLS"
misc_feature complement(109848..110147)
/locus_tag="Sbal_0098"
/note="Protein of unknown function (DUF3240); Region:
DUF3240; pfam11582"
/db_xref="CDD:192778"
gene complement(110147..113200)
/locus_tag="Sbal_0099"
/db_xref="GeneID:4842961"
CDS complement(110147..113200)
/locus_tag="Sbal_0099"
/note="TIGRFAM: heavy metal efflux pump, CzcA family;
PFAM: acriflavin resistance protein;
KEGG: shn:Shewana3_4066 heavy metal efflux pump, CzcA
family"
/codon_start=1
/transl_table=11
/product="CzcA family heavy metal efflux protein"
/protein_id="YP_001048503.1"
/db_xref="GI:126172354"
/db_xref="InterPro:IPR001036"
/db_xref="InterPro:IPR004763"
/db_xref="GeneID:4842961"
/translation="MLTSVIRFSLTQRLFVLIVALIIMLAGARAWFSIPLDAFPDISP
TQVKIILKAPGMTPEEIEAQITVPIETELLGIPHQSILRSTTKYAISDITLDFDEGTD
IYWARQQVSERIAAVWDSFPEGVTGGVAPMSTPLSEIFMFSLENPNLSLMERRQLLEW
EIRPLLRTVAGVADVNILGGYAKSFSVTPKPAAMAAAGVSFAALQQAIVENNHNEGAG
KLTIGTDTIIVRAEGRIDDIDELKQLVIKADDARVYRLQDLADIQIGHLARYGAVTKD
GNETAEALIIALKDANTAQVVKNIKEKLDQISLTLPEGSQINTFYDRANLINTAIDTI
SNALFEAVVLVIILLALFLGNVRAALVVSLSLPLSALMTFLMMDYFNLSANLMSLGGL
VIAIGMLVDSSVVVVENMVNLIATKQRLPRLHLIFRATKDVAIPVVSGTVIVMIVFSP
LLTLSGLEGKLFTPVAVTIVFAMLSALVLSLTVIPVIASYLVNEKAAKEPKAIEKLKQ
LYLGSLKGTFSHQKRFIVIAFSLLIVSLGLFGLVGKTFMPTLDEGDIILQLEKSPSIS
LEASIAIDKQIQQTLLAKVTEIKQMVARTGADEIGLDPMGLNETDVFLELLPRSEWRF
ANKEALIDAIRTVLLDYPGVNFNFTQPIQMRVSEMLTGSIGDVAIKVFGNDIDTLGQL
TSQIQQLVNATSGSVDVKMAMIEGSPFINLTLDNELARGFGMSTMEFARYLKSQLEGV
IVTEVLQGKKRTPVLIANNQSHLSSINELKNQLLVMPDHSLKRLSDVATLSYKQGPIL
IEREQGNRFSVITTNVQGRDIVSFVEELNAKIAQEIKLPSGYSVSFGGEFENQQRATS
NLLLVIPIAIALITLILFTTFGSLAKAGLILANVPFAMMGGIVSLYLSGEYLSVPASV
GFIALLGVAVLNGVVMVSYYEQTKHMFSNLRERVEQGAARRLRPILMTATTAMFGLMP
LVFASGPGAEIQKPLAIVVIGGLLTSTITTLYLLPILYFWLEKRK"
misc_feature complement(110219..113200)
/locus_tag="Sbal_0099"
/note="Putative silver efflux pump [Inorganic ion
transport and metabolism]; Region: COG3696"
/db_xref="CDD:33492"
gene complement(113202..114230)
/locus_tag="Sbal_0100"
/db_xref="GeneID:4844719"
CDS complement(113202..114230)
/locus_tag="Sbal_0100"
/note="KEGG: shn:Shewana3_4065 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048504.1"
/db_xref="GI:126172355"
/db_xref="GeneID:4844719"
/translation="MMAKYGACLFCLSASVATLAQAESLTISSLGNLDLSYVQPQKVA
SYEGSPLPAQVEILPGNDYWISTPENIQQISFLVGQGQLVTKGQAIVKLTGPEVFHYL
AQVEAAGSLYQLAKSRYERNKPLLNNGSISAEKWREISQDYFSTHLEYEHMQHFMEIV
KSTDATTDSLVVGTPVAGIVKLNQVNGPYMAGSQLFSLVPSDSIRVKVSVPMSQSHSL
SAVNINQCHIAIESMSAIAEGAFVTAWSSPVPQECNLLLGQQITVIPEYQKAVYLLPK
NSVFSWEQDSQVFTKTADTLTSITIDILGSTPEQYIVESDQDLSQIQVLSQSVAAVKG
IMLGLGGE"
misc_feature complement(<113577..113720)
/locus_tag="Sbal_0100"
/note="Biotinyl_lipoyl_domains are present in
biotin-dependent carboxylases/decarboxylases, the
dihydrolipoyl acyltransferase component (E2) of 2-oxo acid
dehydrogenases, and the H-protein of the glycine cleavage
system (GCS). These domains transport CO2, acyl; Region:
Biotinyl_lipoyl_domains; cl11404"
/db_xref="CDD:213122"
gene complement(114227..115450)
/locus_tag="Sbal_0101"
/db_xref="GeneID:4842434"
CDS complement(114227..115450)
/locus_tag="Sbal_0101"
/note="KEGG: shm:Shewmr7_3949 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048505.1"
/db_xref="GI:126172356"
/db_xref="GeneID:4842434"
/translation="MSVSTSCIKLCLLATLVSSSFLCHAANSELSQALSTSQARLHSL
SQSGGQLPQSQISLSSSSWLNGLPSISLSHLGSLDNGNSYEQELSLNLPIKSPALHSS
DKQIKQLTQGIQAQQVALQGLYLSGLLRQSLWEHRLAAVKLAKLNRKSQLLDKLHSQQ
KQLTDAGELPIAHILLLERELVDIALERVDLNQQQAEALALYQQLTGQDQIPQDITET
ARPLSASSQPNDILAQHPLWQLLSLQKQQQLLIIQSQQAGDKDPWTVSLTAKNTADNQ
VDDQQLGIAVSVPLTLGSALSQTELSQWQQANTEHTLNLDRTYIELKTQLKKLEQQQQ
NLLDQQTLLTQALHLSRTITEELAKVKDQNQVSYEVWLRRYMDALDTESRLALNQVAQ
QQLHSQQLQALGISL"
gene 115596..116123
/locus_tag="Sbal_0102"
/db_xref="GeneID:4842896"
CDS 115596..116123
/locus_tag="Sbal_0102"
/note="SMART: regulatory protein, LuxR;
KEGG: shn:Shewana3_4063 transcriptional regulator, LuxR
family"
/codon_start=1
/transl_table=11
/product="response regulator receiver protein"
/protein_id="YP_001048506.1"
/db_xref="GI:126172357"
/db_xref="InterPro:IPR000792"
/db_xref="GeneID:4842896"
/translation="MKDLVIIGLLALIICFKLFDISSDIQLGIPQWHIAQEAMLLVLT
VIGAMYLSYDLIRRSREVKALAKRLEHADKKIDNMSTQMRSARQEYSQAVSQQFETWG
FTKSEQQVAFLLLKGLSFKEIAEVRQTKEKTVRQQASTIYGKAAVDGRHTFCAWFMED
FIQEHNQDLAANEAA"
misc_feature <115842..116045
/locus_tag="Sbal_0102"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:32379"
misc_feature 115899..>116027
/locus_tag="Sbal_0102"
/note="helix_turn_helix, Lux Regulon; Region: HTH_LUXR;
smart00421"
/db_xref="CDD:197715"
misc_feature order(115905..115913,115950..115958,115980..115985,
115989..115994,115998..116012,116043..116045)
/locus_tag="Sbal_0102"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(115938..115940,115944..115946,115950..115952,
116043..116051,116058..116060)
/locus_tag="Sbal_0102"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene 116249..116401
/locus_tag="Sbal_0103"
/db_xref="GeneID:4845565"
CDS 116249..116401
/locus_tag="Sbal_0103"
/note="KEGG: shm:Shewmr7_3947 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048507.1"
/db_xref="GI:126172358"
/db_xref="GeneID:4845565"
/translation="MQLKNWLIIAFCLIALVASTQTTGLVRSLIEFSAFVGVLCWAWR
MKPTAE"
gene complement(116428..117378)
/locus_tag="Sbal_0104"
/db_xref="GeneID:4842723"
CDS complement(116428..117378)
/locus_tag="Sbal_0104"
/note="PFAM: conserved hypothetical protein 698;
KEGG: shm:Shewmr7_3946 conserved hypothetical protein 698"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048508.1"
/db_xref="GI:126172359"
/db_xref="InterPro:IPR004630"
/db_xref="GeneID:4842723"
/translation="MNSSSTSQQDNKTHRIVFICAGLLCLAPFISSPMALVLGFTLAS
LGWVPVQWNIAALTKKLLSYSIIGLGFGINLNAAIEASTHNFGLIVGSIFFTLSLGFV
LTRALKFDHVTGHLIASGTAICGGSAIAAVAPAINARNDQTATALACVFVLNSVALFL
FPALGHLLNMSQYDFGVWSAIAIHDTSSVVGAASAYGDEALKTATTIKLARALWIIPI
ALVSAMLFGGDKRKLNLPYFIGFYCLAIAVAHWLPQFNAVYDTLFMMSKRALVLCLFL
IGAGITVQKMRASGPKPLLLGVMLWAAIGITSLVYILYFQ"
misc_feature complement(116431..117279)
/locus_tag="Sbal_0104"
/note="Predicted membrane protein [Function unknown];
Region: COG2855"
/db_xref="CDD:32683"
gene complement(117665..118228)
/locus_tag="Sbal_0105"
/db_xref="GeneID:4843215"
CDS complement(117665..118228)
/locus_tag="Sbal_0105"
/EC_number="2.3.3.9"
/note="Catalyzes the aldol condensation of glyoxylate with
acetyl-CoA to form malate as part of the second step of
the glyoxylate bypass and an alternative to the
tricarboxylic acid cycle"
/codon_start=1
/transl_table=11
/product="malate synthase"
/protein_id="YP_001048509.1"
/db_xref="GI:126172360"
/db_xref="GeneID:4843215"
/translation="MNMSIIKSNQIQPNLNSLIAEEVLAVAQVNVAEHEKIANAKQFL
DRLFPLNSGSHQDVSSYVVYYQHLLAFFADGSHSGLRQPKQFVAFNGTKDAPCAIVLQ
DLGCHVELSFDRSGMIGARDVANLEDIQIGTSLNMVVGTPESRSAASRHWLSLLHAGM
SSANDTQDKLFTAKDGSDYNLKSIVNL"
misc_feature complement(117668..118228)
/locus_tag="Sbal_0105"
/note="malate synthase; Provisional; Region: PRK08951"
/db_xref="CDD:181593"
gene 118480..120009
/locus_tag="Sbal_0106"
/db_xref="GeneID:4843282"
CDS 118480..120009
/locus_tag="Sbal_0106"
/note="PFAM: helix-turn-helix domain protein;
KEGG: shm:Shewmr7_3944 transcriptional regulator, XRE
family"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_001048510.1"
/db_xref="GI:126172361"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:4843282"
/translation="MRNDQSLMRKSHFLGTKIRNLRKRNNLTMEDLSARCIRVDAGSA
PSVSYLSMIERGKRVPSAGMLAVIAAVFQKDADWFLDDVPEESAITPDKGRRGGISGM
ALEPSFLFSNDILQIAIPEMLSQTGISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVG
LKRMPLSLDDMLDIAKGMGLKIKWIDSTPQEVIDDMGVSSRQLVTSFFEPPSTIYVNK
ILKNRPNRLKYDLAVHIGHCVLHNKDGLKSVMTSGRKEEVDEEAGMQSNTLNAQDILH
AWRDFESSFFAGALLCPKVPYRQLLDRHGYEIEVHKQLQVSASVAMRRMTVVSPYPHW
HYFDAYAPGKLKAVYRGNGIPLPWGNMRLVEDPCQHWAVFRMISEPTVGTSAQISILN
VGNEPRIYCCESIKVEDSAGNPHVLCAGIDLNPAIEAQGKDALSIAHDLKDACVASGG
SVTIPKHIKSDLVSVAKILNINWIERGIKNDARLICSRGAVCPRQPSCYQAGKSQCDG
E"
misc_feature 118519..>118743
/locus_tag="Sbal_0106"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:31586"
misc_feature 118522..118716
/locus_tag="Sbal_0106"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(118534..118536,118546..118548,118642..118644)
/locus_tag="Sbal_0106"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(118543..118545,118639..118641)
/locus_tag="Sbal_0106"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(118564..118569,118621..118623,118630..118632,
118642..118647)
/locus_tag="Sbal_0106"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
misc_feature 119455..119979
/locus_tag="Sbal_0106"
/note="Protein of unknown function (DUF3612); Region:
DUF3612; pfam12268"
/db_xref="CDD:152703"
gene 120570..121478
/locus_tag="Sbal_0107"
/db_xref="GeneID:4845000"
CDS 120570..121478
/locus_tag="Sbal_0107"
/note="KEGG: pha:PSHAa0008 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048511.1"
/db_xref="GI:126172362"
/db_xref="GeneID:4845000"
/translation="MKELHFSIVSDSLLKTHKAKLSDCEYLELSSAREILSKILDHEE
LYDQVIESYVEAKSTMYEMSVRAISDSVKYDYIKNHNNRSKLNRLYFNVLNFSKLYLD
RHFHDGDKKSFVKSITASESSHDEVKKHRQDISKNNPDYIFGCKLRNYVQHASLPVKT
FTTGVRWSPEDNQSVAIFHVPLAKKKLIDSGIFSQQMLLKYGEKIDLHQIMDGYIYAI
SEMHLKSRQLIKNYMEKSLEVINLKRRQIELEHSSSLCDINVVDTEQGVSLCSLHVEW
FSVVEHLQKKNLHSLNFKRFTHIPYQ"
gene complement(121674..122000)
/locus_tag="Sbal_0108"
/db_xref="GeneID:4842924"
CDS complement(121674..122000)
/locus_tag="Sbal_0108"
/note="KEGG: sdn:Sden_2357 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048512.1"
/db_xref="GI:126172363"
/db_xref="GeneID:4842924"
/translation="MTATGELLTCFIAMGLLALSYFSHHRAVRNRPLTDAQARGFRTA
GTATLVLCYWLASRHYGPAYASVLLLGWVCLSSIILVILLSYKPRWLQPILPASAVVC
LLGLLY"
misc_feature complement(121677..121982)
/locus_tag="Sbal_0108"
/note="Protein of unknown function (DUF3325); Region:
DUF3325; pfam11804"
/db_xref="CDD:152240"
gene complement(121997..123601)
/locus_tag="Sbal_0109"
/db_xref="GeneID:4842055"
CDS complement(121997..123601)
/locus_tag="Sbal_0109"
/note="PFAM: PepSY-associated TM helix domain protein;
KEGG: shm:Shewmr7_1218 PepSY-associated TM helix domain
protein"
/codon_start=1
/transl_table=11
/product="PepSY-associated TM helix domain-containing
protein"
/protein_id="YP_001048513.1"
/db_xref="GI:126172364"
/db_xref="InterPro:IPR005625"
/db_xref="GeneID:4842055"
/translation="MKDSFFRSMTWLHTWVGLLTCWVLFLVFFAGTAAYYRAEINIWM
QPENHGSQYDVNADNQQLILKGLTALAQQAPDAETWWVYLPTQRTPLLTYAWSEPAAE
GQRFGDYHQSFINPATGEALPKARESRGGDFLYRLHFDLYYMSVITARWIVGFCTMFM
LVAIISGIVIHKRIFKDFFSFRPGKGPRSWLDAHVASSVLALPFHLMITYTGLVTLMF
MYMPWGLNTQYGDETQAFYSQWKPIYSSSVPSGEAATMQSPQQLLASLNAAMPMSDEA
SSPIEMLQVEHLNDANARVTVRISPEHSLNQQAPWYRFSAVTGKLTEESTATSAANKT
QSTMIALHSGRFAGQGLRLLYLLAGITGCVMIATGAIMWAEKLAQKQHKSGQFKPGLA
LVKMLNLATFAGLPIALASYFYANRLLPVSFVDRENWEIHCFFISWALVALFACFKRD
KQTWQRLFLFTALLYGLLPLLNAMTSQYQLISNLQRQAYVLAGFDLMMLALAALFYMA
AKRLRSSQKVRAAQVTKATAELGIES"
misc_feature complement(122465..123601)
/locus_tag="Sbal_0109"
/note="Uncharacterized iron-regulated membrane protein
[Function unknown]; Region: PiuB; COG3182"
/db_xref="CDD:32995"
misc_feature complement(123479..123583)
/locus_tag="Sbal_0109"
/note="PepSY-associated TM helix; Region: PepSY_TM_3;
pfam13706"
/db_xref="CDD:205881"
misc_feature complement(122951..123205)
/locus_tag="Sbal_0109"
/note="PepSY-associated TM helix; Region: PepSY_TM_2;
pfam13703"
/db_xref="CDD:205878"
gene complement(123598..123966)
/locus_tag="Sbal_0110"
/db_xref="GeneID:4842106"
CDS complement(123598..123966)
/locus_tag="Sbal_0110"
/note="KEGG: bbr:BB3605 putative iron uptake protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048514.1"
/db_xref="GI:126172365"
/db_xref="GeneID:4842106"
/translation="MTEKTNITPPLTQRLMRWKMSAIWSDSLHIGNRCLAATFGGYLL
SAIATILLAQILPLSQVDRVLTAMMLSFTVYTCAVIWVFSVKSTWRYWLDLFALSGLL
YLAYLAAKALDINPIQGGGL"
gene complement(123959..127138)
/locus_tag="Sbal_0111"
/db_xref="GeneID:4843284"
CDS complement(123959..127138)
/locus_tag="Sbal_0111"
/note="PFAM: acriflavin resistance protein;
KEGG: csa:Csal_2405 acriflavin resistance protein"
/codon_start=1
/transl_table=11
/product="acriflavin resistance protein"
/protein_id="YP_001048515.1"
/db_xref="GI:126172366"
/db_xref="InterPro:IPR001036"
/db_xref="GeneID:4843284"
/translation="MLKFGIKHGTLLSVIVLIFCVLGTAAALRIPIQMIPDLDVRTIS
VATGWPGATPQDVEKEILLEQERYLRTLPNLQRMTSWADTGSAWVELEFPQSTEISDA
LIRVSNALSQVSSYPENVDQPRLYSSSYSDNAFMYFRLVPVAGNPLNLDIDMMRDFAN
DFIRPQMERVKGVSSVTIQGGAERQIQILLDPAKLAQRGISIMDVRQAIRDRNKDTSA
GDIDSGKKRYLLRVIGRFEDLNQLKQLILKRQGNTNILLQDVAEIKLDHAEIRELSFA
EQERTLSLAVKRDVGSNVIAIKAAMMPVVAQINQNQLAQHAMQLELFSDDVRYVQDSV
ANVWVNLGLGALLATLVMYLFLRSSRATLIGVIGIPLCTLAAFVGLLVFNRTINVISL
AGVAFAIGMTVDNSIVVLESIEQARRRGLNRLEAAISGIYDVWPAVLASTLTTVLVFV
PILFIKQEAGQLYSDIAIAIASSIIASMLVAVFIVPAAIARFGFGKMHSAQTNQSEPP
KASRILSLVSQLVLSAKRRAAVIVLSLVSTIGLAAWLMPPAEYLPEGEEPKAFTSMVA
PPGYNLSEMAKIAEELTTQLSARVNAEATSFESGEQKIPPLKYYTLSVGVGSIWVMSE
PVRSQDMEAMMSSLTALFEQYPGMRAYSSRGSIISSNDGGTRAVALDISGPNQASLYR
AAEAAYQAAEKVFAEPQLYSDPSTLSLDQPLWQISPRWQRLVEQDFSGSEFGYAVSAL
SDGAYVDEFFLNDNKVDIFLFSLAGNQQSLSQLALAPIVTPKGNVLPLQALADISEQM
DSDSLRRVDGRRTVTLYIIPPRAIALETAVAKVREELVPILYQQGAVGKDVSLDISGA
ADQLEATKAALSSNFLVAVLIIYLLLVAIFNHWGYPLFVLVTIPLGLAGGLVGLQALN
YTGSLFAYLGGQGWHQPFDMITMLGFLILLGTVVNNPILIVEQSRKNLQSGLFSVVDA
VKSAVANRLRPILMSTATTLFGLLPLVLFPGAGSELYRGVGIVVLAGLIVATLLSLTF
LPALLISVLSYTNRANLTASSAKVAHHHD"
misc_feature complement(124175..127138)
/locus_tag="Sbal_0111"
/note="Cation/multidrug efflux pump [Defense mechanisms];
Region: AcrB; COG0841"
/db_xref="CDD:31183"
misc_feature complement(125774..126205)
/locus_tag="Sbal_0111"
/note="Protein export membrane protein; Region: SecD_SecF;
cl14618"
/db_xref="CDD:199094"
gene complement(127143..128192)
/locus_tag="Sbal_0112"
/db_xref="GeneID:4842764"
CDS complement(127143..128192)
/locus_tag="Sbal_0112"
/note="TIGRFAM: efflux transporter, RND family, MFP
subunit;
PFAM: secretion protein HlyD family protein;
KEGG: hne:HNE_2191 efflux transporter, RND family, MFP
subunit"
/codon_start=1
/transl_table=11
/product="RND family efflux transporter MFP subunit"
/protein_id="YP_001048516.1"
/db_xref="GI:126172367"
/db_xref="InterPro:IPR006143"
/db_xref="GeneID:4842764"
/translation="MRYLMIGLYLLCFAVHASAVPVTVALPQTGSTNELLPLSGSIKS
ARVARLSARTDGLVAKVLVDAGSQVRAGQPLLALDDTLAVHQLAQRQADVIAVKTMLA
EKQRLLTEAQTLSAQQLFPETERAIRQAALTEAEANLQSLTAALAHQKEVVARHQLMA
PFAGVISSKQTETGEWVNVGTEIFTLVSQEQLWLDIQVPQEMFQSVATATHVDIAADM
LPEQQFIGHVNALVPVSDHNARSFLVRLTIPEADGLLMPGTSATATFHLQRAQHSVVV
PQDALIRHPDGQFSVFTVQNNIAQRHTVQVGHTSAIGIEILSPLPKDAPVVIRGNESL
QDQQSVSVLNSVIGG"
misc_feature complement(127167..128129)
/locus_tag="Sbal_0112"
/note="RND family efflux transporter, MFP subunit; Region:
RND_mfp; TIGR01730"
/db_xref="CDD:162505"
misc_feature complement(127911..128057)
/locus_tag="Sbal_0112"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature complement(127419..127724)
/locus_tag="Sbal_0112"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene complement(128220..128861)
/locus_tag="Sbal_0113"
/db_xref="GeneID:4843709"
CDS complement(128220..128861)
/locus_tag="Sbal_0113"
/note="KEGG: xcv:XCV0280 putative secreted protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048517.1"
/db_xref="GI:126172368"
/db_xref="InterPro:IPR000585"
/db_xref="GeneID:4843709"
/translation="MKQALVLLTLLGGIAFSAQAHEVWLERSSDGSVKVQFGEPGSEY
ATAEELASLSAARIFDANAKAPLTATAQADHLLVKTQDGKSDVSFYADTAWQPWKTET
GLQAAILYARTGQEHTKALQDFEFTPVKSGDPEFVLSYKGAPLVNHPVQVYRPGFWSK
SFTTDAQGKFALDTPDAGRYLLVSNHTTEGKQTLAGNEVDSVLHITTTSFITQ"
misc_feature complement(128295..128810)
/locus_tag="Sbal_0113"
/note="Domain of unknown function (DUF4198); Region:
DUF4198; pfam10670"
/db_xref="CDD:151174"
gene complement(128902..131088)
/locus_tag="Sbal_0114"
/db_xref="GeneID:4843299"
CDS complement(128902..131088)
/locus_tag="Sbal_0114"
/note="TIGRFAM: TonB-dependent siderophore receptor;
PFAM: TonB-dependent receptor; TonB-dependent receptor,
plug;
KEGG: pen:PSEEN2529 TonB-dependent siderophore receptor"
/codon_start=1
/transl_table=11
/product="TonB-dependent siderophore receptor"
/protein_id="YP_001048518.1"
/db_xref="GI:126172369"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR010105"
/db_xref="InterPro:IPR012910"
/db_xref="GeneID:4843299"
/translation="MPPLSVLTSWRSPLIPVLLSTLTLTVQANTDPKQDEKEDTEQIE
RLNVVGTYTRAAMNSATGLSMSLKETPQSVTLITEEMISDKGLITMESVLNHTPGVTM
VGDASENSKIFVRGYALDSGVQIDGLITTSSSNVYSGSIDQGLDPVIAERVEVLKGAA
GILSGLGEPSATVNFIRKRPTDDTRATASVSYGSWNTYRLEADVSGWLTDSGNVKGRF
VSAVKKGDSFIDRYQRDTTVLYGVVETSLSTDTSLSLFADYQKSQTDGVYNWNSNPAF
YTDGTAVDFGRSYSSSQDWTHWDVTQKSLMAEFKHRFDNDWSLVSAYRIANATIDALA
FYPGDNIVKSTGEFVGPWGDTYAAQHDRESDTNSFNLYATGNFDLLGREHSAVIGFNY
GDNEFDNINTNSAPQRRYNVADQGNYPKPNLPNSPTNGQKNEQSQSGVYGTVRINVLD
SLKLMVGGRVSNWSYEKHDLVGNSTDATMEKTGIFIPYYGLVYDVTEQISVYASRTEI
FKPGTYFGEDGQLLEPAEGTNVEGGIKVALFDDTLNMSAAVYETNKDNEPEYAGKGQL
PSGDFIYESIDGITTKGYELEIAGRLTDLWDISGGYTHNDAEDEDGLRRQTYLPEDIF
KLTTKYNFEDILPGVTAGASWRWQSSTFYQGTIWGVDGAPNVAYRQAQSAYSLVDLMF
GYQITPSISMQVNINNIFDKNYNRSLWGYADFGEPRNATLSLRWTL"
misc_feature complement(128905..130941)
/locus_tag="Sbal_0114"
/note="Outer membrane receptor for ferric coprogen and
ferric-rhodotorulic acid [Inorganic ion transport and
metabolism]; Region: FhuE; COG4773"
/db_xref="CDD:34386"
misc_feature complement(128908..130872)
/locus_tag="Sbal_0114"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(130558..130584,130618..130650,
130699..130722,130738..130755,130786..130815,
130843..130872))
/locus_tag="Sbal_0114"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(130003..130005,130099..130101))
/locus_tag="Sbal_0114"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene complement(131491..132738)
/locus_tag="Sbal_0115"
/db_xref="GeneID:4843230"
CDS complement(131491..132738)
/locus_tag="Sbal_0115"
/note="TIGRFAM: gamma-glutamyl phosphate reductase;
KEGG: shm:Shewmr7_3942 gamma-glutamyl phosphate reductase"
/codon_start=1
/transl_table=11
/product="gamma-glutamyl phosphate reductase"
/protein_id="YP_001048519.1"
/db_xref="GI:126172370"
/db_xref="InterPro:IPR000965"
/db_xref="GeneID:4843230"
/translation="MTLIKNLSQEAAKAALILAQVDEQLKNTVLLDMARSLREKSYEI
QSANLIDLHRATADNVAPAMLDRLTLTPERVEAMALGIETIAALPDPIGNERYIGQRP
NGLSISKMRVPLGVVCMIYEARPNVTADAGALCFKSGNAVILRGGKEALHTSKIIATI
LQSVLKQYGLPEALITVVPDPDRALMLELMQQRDYIDVIIPRGGEGLINFVSDNSKIP
VIQHFKGVCHLYVDKDADLDIALDLLLNGKTQRTGVCNALEALLVHQEIASQFLPKVA
KALAEHKVKINACTQSGGYFENCTYMEEDDFGQEYLDLEIAIRQVDHFDHAIQHIARF
GSQHTEVICTENEVTAARFQRAVDASVVMVNASSRFSDGSELGLGAEIGIATSKLHAY
GPMGLESLTAEKYLVSGTGQVRA"
misc_feature complement(131509..132726)
/locus_tag="Sbal_0115"
/note="Gamma-glutamyl phosphate reductase (GPR), aldehyde
dehydrogenase families 18 and 19; Region:
ALDH_F18-19_ProA-GPR; cd07079"
/db_xref="CDD:143398"
misc_feature complement(131527..132708)
/locus_tag="Sbal_0115"
/note="gamma-glutamyl phosphate reductase; Region: proA;
TIGR00407"
/db_xref="CDD:161862"
misc_feature complement(131974..131976)
/locus_tag="Sbal_0115"
/note="putative catalytic cysteine [active]"
/db_xref="CDD:143398"
gene complement(132787..133887)
/locus_tag="Sbal_0116"
/db_xref="GeneID:4845058"
CDS complement(132787..133887)
/locus_tag="Sbal_0116"
/EC_number="2.7.2.11"
/note="catalyzes the formation of glutamate 5-phosphate
from glutamate in proline biosynthesis"
/codon_start=1
/transl_table=11
/product="gamma-glutamyl kinase"
/protein_id="YP_001048520.1"
/db_xref="GI:126172371"
/db_xref="InterPro:IPR001048"
/db_xref="InterPro:IPR001057"
/db_xref="InterPro:IPR005715"
/db_xref="GeneID:4845058"
/translation="MTDLPWKRIVVKVGSALIAPHKQGCSSHYLLGIAQFITYCRAQG
IQVVLVSSGSVAAGWHHFGEVDKPSVTVKKAMAAAGQADMMATWNKLFDFPTAQLLLT
HGDLRNRDRYISIKDTIFSLLEHGLLPIINENDAVTADKLKVGDNDNLSAMLAAAADA
DTLIICSDVNGLYTQNPHENPDAQLIKQVTEINAEIYAMAGGASSAVGTGGMRAKIQA
AKKAISHGIETFIINGFDADSFNQLLKGQNPGTLFTPDEKPMQDHLHWMTHTSQAQGE
VIVENDFNISLDIHSEQLTSDDVVAINGDFSAGDTILVRKGDGTKLAKAKSNYSSCLL
SFITDQDDREFASEFQQKTGPIISEKNIAILE"
misc_feature complement(132790..133884)
/locus_tag="Sbal_0116"
/note="gamma-glutamyl kinase; Provisional; Region:
PRK13402"
/db_xref="CDD:184032"
misc_feature complement(133126..133866)
/locus_tag="Sbal_0116"
/note="AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes
glutamate-dependent ATP cleavage; G5K transfers the
terminal phosphoryl group of ATP to the gamma-carboxyl
group of glutamate, in the first and controlling step of
proline (and, in mammals, ornithine)...; Region:
AAK_G5K_ProB; cd04242"
/db_xref="CDD:58608"
misc_feature complement(order(133243..133245,133255..133257,
133261..133263,133369..133374,133381..133389,
133840..133842))
/locus_tag="Sbal_0116"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:58608"
misc_feature complement(order(133477..133482,133486..133488,
133516..133518,133525..133527,133543..133548,
133588..133590,133594..133596,133654..133656,
133666..133668,133753..133755,133762..133767))
/locus_tag="Sbal_0116"
/note="homotetrameric interface [polypeptide binding];
other site"
/db_xref="CDD:58608"
misc_feature complement(133708..133731)
/locus_tag="Sbal_0116"
/note="putative phosphate binding site [ion binding];
other site"
/db_xref="CDD:58608"
misc_feature complement(order(133450..133452,133483..133485,
133726..133728))
/locus_tag="Sbal_0116"
/note="putative allosteric binding site; other site"
/db_xref="CDD:58608"
misc_feature complement(<132895..>132993)
/locus_tag="Sbal_0116"
/note="PUA domain; Region: PUA; cl00607"
/db_xref="CDD:207130"
gene complement(133899..135395)
/locus_tag="Sbal_0117"
/db_xref="GeneID:4845126"
CDS complement(133899..135395)
/locus_tag="Sbal_0117"
/note="TIGRFAM: SSS sodium solute transporter superfamily;
sodium/proline symporter;
PFAM: Na+/solute symporter;
KEGG: she:Shewmr4_3847 sodium/proline symporter"
/codon_start=1
/transl_table=11
/product="sodium/proline symporter"
/protein_id="YP_001048521.1"
/db_xref="GI:126172372"
/db_xref="InterPro:IPR001734"
/db_xref="InterPro:IPR011851"
/db_xref="GeneID:4845126"
/translation="MNYLAYISLAIYFIVMLAIGLFAYKKSTSDVSGYILGGRKVSPQ
VTALSAGASDMSGWMLMGLPGAMFLVGFETIYIALGLLIGALINYLVVAPKLRVYTEV
ADNALTIPEFFAKRFGNANGSIRIISAVIIVIFFTLYTSAGLVAGGKLFESAFGLNYD
IGLVVTLAVVVSYTLLGGFLAVSLTDFVQGCIMFVALVLVPVVAYQEFTSADTMLNFA
YQSIPHFTDAMQNVTMLGLISSLSWGLGYFGQPHIIVRFMAIRSVADIKTARHIGMGW
MTVTIVGALATGLVGIAYANKFGMKLTDPETIFIVFSELLFHPIISGFLLAAILAAIM
STISSQLLVSSSSLTEDIYRVISKKESTEKDMVKMGRFGVAGVAIVASLLALDRSSSV
LSLVSNAWAGFGAAFGPLVLFSLYKANLTHKAAIAGIVSGAATVLFWIYAPVLADGQA
LTTVVYEMIPGFAVSSVVIWIVSLLDTDPCAKTTKLFHKAGRVLAEDR"
misc_feature complement(134007..135380)
/locus_tag="Sbal_0117"
/note="Na(+)/proline cotransporter PutP and related
proteins; solute binding domain; Region: SLC5sbd_PutP;
cd11475"
/db_xref="CDD:212045"
misc_feature complement(order(134388..134393,134400..134402,
135231..135233,135240..135242))
/locus_tag="Sbal_0117"
/note="Na binding site [ion binding]; other site"
/db_xref="CDD:212045"
gene complement(135739..137811)
/locus_tag="Sbal_0118"
/db_xref="GeneID:4842218"
CDS complement(135739..137811)
/locus_tag="Sbal_0118"
/note="PFAM: Fusaric acid resistance protein conserved
region;
KEGG: pha:PSHAa1079 hypothetical protein ; membrane
protein"
/codon_start=1
/transl_table=11
/product="fusaric acid resistance protein region"
/protein_id="YP_001048522.1"
/db_xref="GI:126172373"
/db_xref="InterPro:IPR006726"
/db_xref="GeneID:4842218"
/translation="MTLLLKSLFFPDRRTLIFAIKGVISMELALYVAMFLNLERPYWA
LVSAVFLQIRPESGLVIEKGLCQIGGTLVGALAGIAILNWFTPYPELALGLLACWIGL
NSGLSAMVRQQNFVYAFAMAGMTACLIVLIVMASPSTADSAKIFDVAQSRISEIVVGA
ICAVLVSSLLWPTKVKHSLQLHAKNTINHTLNYLALELDLQGEHTSRHEHIDTIMVSV
SALSDDSSAVIYEGPEGRGQSHAANFLCNKTLSLLAAIQIFGRLQRNHSHLVSEPLAK
SLANMRSSFTLMAQSSDYQECYKMARTLRYQLQQNLMQYRDRAPLETRLLKVAMELSA
DLIMVLKSYNVLTSHSAVQLNAPPMEFHRDPLIGVTTGLRSMAVFVIGASLWIGTGSS
AVLMMILLPVVFSIMMARQPLPMLTTILRRILVGITIAVPLTVFYALPLLAQSSGDFE
ILVLVLAGPFFIGLLALANRPTLPYGLGICVPFAVLVQPSNTISFAIENTVSNALAIF
VGVTVLYWLFKLITEPSQRLMQYRLLQSIQKDLVHIAQHDDPEPWFNARMGDRLLRIA
SYEKGSGKSSRVFTDLVFTALNLGHVSIRMRRMLQGISDTHLNLGLENALNLWQHNLG
QAFIACAHGQVAEEFKISSEALLEALAQCPLPHEQFTMITGMFERITLTFERTAHSIA
EQKNTSEK"
misc_feature complement(135775..137769)
/locus_tag="Sbal_0118"
/note="Fusaric acid resistance protein family; Region:
FUSC; pfam04632"
/db_xref="CDD:203061"
misc_feature complement(137314..137730)
/locus_tag="Sbal_0118"
/note="Fusaric acid resistance protein-like; Region:
FUSC_2; pfam13515"
/db_xref="CDD:205693"
gene complement(137817..138680)
/locus_tag="Sbal_0119"
/db_xref="GeneID:4845877"
CDS complement(137817..138680)
/locus_tag="Sbal_0119"
/note="PFAM: secretion protein HlyD family protein;
KEGG: abo:ABO_1136 efflux transporter, membrane fusion
protein, putative"
/codon_start=1
/transl_table=11
/product="secretion protein HlyD family protein"
/protein_id="YP_001048523.1"
/db_xref="GI:126172374"
/db_xref="InterPro:IPR006143"
/db_xref="GeneID:4845877"
/translation="MGKIFRISLTLIVVAVAGIAGHWIWSHYLYSPWTRDGRVRAEII
TIAPDVSGWVNQLNVKDNQVVNKGDVLFTVDDTRYKATIAELNAKAESQKLAWELAKH
KYKRRIGLTNDNLVSKETFDEAFINTELARTSYELAQAQLNTAQIDLARTQIHAPENG
TLINLSLRNGNYVSKGNSVFSLVKQDSFYITGYFEETKIPLVHIGQNADVSLMSGGHV
LHGKVTSIGKAIANTNVTTNGQLLPQIGQTFNWVRLSQRIPVDIQLDSIPKDIELSVG
MTVSIQLQTDK"
misc_feature complement(137826..138680)
/locus_tag="Sbal_0119"
/note="Multidrug resistance efflux pump [Defense
mechanisms]; Region: EmrA; COG1566"
/db_xref="CDD:31754"
misc_feature complement(138408..138551)
/locus_tag="Sbal_0119"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature complement(137973..138224)
/locus_tag="Sbal_0119"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene complement(138687..138899)
/locus_tag="Sbal_0120"
/db_xref="GeneID:4845654"
CDS complement(138687..138899)
/locus_tag="Sbal_0120"
/note="PFAM: protein of unknown function DUF1656;
KEGG: pha:PSHAa1077 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048524.1"
/db_xref="GI:126172375"
/db_xref="InterPro:IPR000437"
/db_xref="InterPro:IPR012451"
/db_xref="GeneID:4845654"
/translation="MNSVMLKELAFDGLLFSPLIIFIPLAFLLSCITRLVLYQTGLYH
KLWREAWFEVGLFICYLALVIYLLGS"
misc_feature complement(138708..>138806)
/locus_tag="Sbal_0120"
/note="Protein of unknown function (DUF1656); Region:
DUF1656; pfam07869"
/db_xref="CDD:203786"
gene complement(139069..140424)
/locus_tag="Sbal_0121"
/db_xref="GeneID:4841416"
CDS complement(139069..140424)
/locus_tag="Sbal_0121"
/EC_number="1.8.1.7"
/note="catalyzes the reduction of 2 glutathione to
glutathione disulfide; maintains high levels of reduced
glutathione in the cytosol; involved in redox regulation
and oxidative defense"
/codon_start=1
/transl_table=11
/product="glutathione reductase"
/protein_id="YP_001048525.1"
/db_xref="GI:126172376"
/db_xref="InterPro:IPR000103"
/db_xref="InterPro:IPR000815"
/db_xref="InterPro:IPR001100"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR004099"
/db_xref="InterPro:IPR006322"
/db_xref="InterPro:IPR012999"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:4841416"
/translation="MAQHFDYICLGAGSGGIASANRAAMRGAKVLLIEAKHVGGTCVN
VGCVPKKVMWYGAHVAEAMNLYAKDYGFDVTVNKFDWNTLVENREAYIGRIHDAYGRG
FANNKVTLLNGYGRFVDGNTIEVDGEHYTADNILIATGGAPTIPDIPGAEYGIDSDGF
FALREQPKRVAVVGAGYIAVEVAGVLHALGSETHLLVRKHAPLRNFDPILVDALVEAM
ATEGPTLHTHSVPKAVVKNADDSLTLSLENGESITVDCLIWAIGRSPATGNIGLENTE
VQLDSKGYVITDEQQNTTHKGIYCIGDIMAGGVELTPVAVKAGRLLSERLFNGMTDAK
MDYSLIPTVVFSHPPIGTMGLTEPEARTHYGDDNVKVYTSTFTSMYTAVTAHRQACKM
KLVCAGKDEKVVGIHGIGFGMDEILQGFGVAMKMGATKADFDAVVAIHPTGAEEFVTM
R"
misc_feature complement(139072..140424)
/locus_tag="Sbal_0121"
/note="glutathione reductase; Validated; Region: PRK06116"
/db_xref="CDD:180410"
misc_feature complement(<140299..140397)
/locus_tag="Sbal_0121"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(139678..139920)
/locus_tag="Sbal_0121"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
misc_feature complement(139072..139407)
/locus_tag="Sbal_0121"
/note="Pyridine nucleotide-disulphide oxidoreductase,
dimerisation domain; Region: Pyr_redox_dim; pfam02852"
/db_xref="CDD:202431"
gene complement(140604..141167)
/locus_tag="Sbal_0122"
/db_xref="GeneID:4843850"
CDS complement(140604..141167)
/locus_tag="Sbal_0122"
/note="KEGG: son:SO4701 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048526.1"
/db_xref="GI:126172377"
/db_xref="GeneID:4843850"
/translation="MLAQHFYLIRTAVIALLLLFLPVIHSADARQLLELEPESEPSLE
SLSQSTQTAPLPLGTLLDSEGKPINLPDQEQSSFEYSAPTLTPAEPSKATKSTKDTQS
TKATKSKKLSRKQQLASREHVANDPNCRWLDKRMDQLEAQLGGKQDNAATHQADELSA
RQKEWQCLKCGAEGPAQNDHSNCQYRR"
gene complement(141335..142126)
/locus_tag="Sbal_0123"
/db_xref="GeneID:4842401"
CDS complement(141335..142126)
/locus_tag="Sbal_0123"
/note="KEGG: son:SO4700 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048527.1"
/db_xref="GI:126172378"
/db_xref="GeneID:4842401"
/translation="MATHSVKLMASILCTLGINGLSYNAFANESLESIESISSAGLSS
QNSQALAVTLDLGWDSQYVSQGRNNLQDGGIYWLNTAVQQDNITAYALVGRGDSQAYT
EWNIGLEYGFDVAENLEANVGYQRIEGYSNTRCHDNELFAELAYTAEPWLVPSASYVY
STEAAGYFVEVSLHSYWHVTDQLSLTPYITQGFDFKYRTEEHDGRNNLQFGLEASYQL
SSYMSIDGHISHSIAQEDIEQEAMANGDMSSQDETYAGIHFAITF"
gene 142395..144434
/locus_tag="Sbal_0124"
/db_xref="GeneID:4843395"
CDS 142395..144434
/locus_tag="Sbal_0124"
/EC_number="3.4.24.70"
/note="PFAM: peptidase M3A and M3B, thimet/oligopeptidase
F;
KEGG: son:SO4699 oligopeptidase A"
/codon_start=1
/transl_table=11
/product="oligopeptidase A"
/protein_id="YP_001048528.1"
/db_xref="GI:126172379"
/db_xref="InterPro:IPR001567"
/db_xref="InterPro:IPR006025"
/db_xref="GeneID:4843395"
/translation="MSNPLLSGAKLPLFSQIKPEHIQVAVEHAIAQCRTKIDEVLQNQ
GPYTWDNLVAPLEQVDDELSQIWSPVSHMNSVTSTDEWRAAHDACLPLLSEYGTYVGQ
HQGLYQAYKALRASNEFAQLSQAQQRVIEHSLRDFELSGIGLDDAQKVRYGEMVKRLS
ELTSGFSNQLLDATQAWTKLITDEAELAGLPESAKAAAKAMADARELDGWLFTLDFPS
YLPVMTYSENRSLREECYRAFVTRASDQGPNAGEFDNSPLMDEILALRHELALLLGFD
SFADKSLATKMAETPAQVMAFLNELALRSKDQAKAEVAELRAFAEAQYGVSEMASWDL
SFYAEKLQQHKYEISQEILRPYFPEDKVLSGLFYTVSRLFGLKIVEQKDLDRWHKDVR
FFDIFDETGEHRGSFYLDLYARTGKRGGAWMDDCRVRRQTAHGLQKPVAYLTCNFNGP
VDGKSALFTHDEVTTLFHEFGHGIHHMLTKIDVAGVSGINGVPWDAVELPSQFMENWC
WQEEALAEISGHFETGEPLPKALLDKMLAAKNFQSGMMMLRQLEFSLFDFRMHHEYDP
AKGARIQETLDEVRRQVAVLTPPDFNRFQHGFAHIFAGGYAAGYYSYKWAEVLSADAF
SRFEEEGIFNPETGRRFLHNILEMGGSAEPMDLFKQFMGREPNIDALLRHSGIAA"
misc_feature 142395..144431
/locus_tag="Sbal_0124"
/note="Zn-dependent oligopeptidases [Amino acid transport
and metabolism]; Region: Dcp; COG0339"
/db_xref="CDD:30687"
misc_feature 142452..144425
/locus_tag="Sbal_0124"
/note="Peptidase family M3 dipeptidyl carboxypeptidase
(DCP); Region: M3A_DCP; cd06456"
/db_xref="CDD:188995"
misc_feature order(143655..143663,143796..143801,143808..143810,
143886..143888,143895..143897,144042..144044,
144168..144173,144189..144194,144204..144212,
144222..144224,144231..144233)
/locus_tag="Sbal_0124"
/note="active site"
/db_xref="CDD:188995"
misc_feature order(143796..143798,143808..143810,143886..143888)
/locus_tag="Sbal_0124"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:188995"
gene 144619..145149
/locus_tag="Sbal_0125"
/db_xref="GeneID:4843041"
CDS 144619..145149
/locus_tag="Sbal_0125"
/note="KEGG: shm:Shewmr7_3934 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048529.1"
/db_xref="GI:126172380"
/db_xref="GeneID:4843041"
/translation="MNLYFRLFWLLFWRTRHCRKIDFLGTSRITYRALPSDCDINFHL
TNSRYPAFMDLARTYMLAEMGLLKRFLKLKWMPIVNAAEFTYIRDIKPLKTFEIETKV
VGWDEKYFYIEQRFASERGLHCIVHVRGVFVCKGKQVPLDVLVKEAGYTDAAPELPPE
VVKWKAFLQLKKERNM"
misc_feature 144700..145017
/locus_tag="Sbal_0125"
/note="4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes
the final step in the 4-chlorobenzoate degradation pathway
in which 4-chlorobenzoate is converted to
4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT
forms a homotetramer with four active sites; Region: 4HBT;
cd00586"
/db_xref="CDD:48031"
misc_feature order(144778..144780,144847..144849,144853..144855,
144934..144945)
/locus_tag="Sbal_0125"
/note="active site"
/db_xref="CDD:48031"
gene complement(145175..145822)
/locus_tag="Sbal_0126"
/db_xref="GeneID:4843088"
CDS complement(145175..145822)
/locus_tag="Sbal_0126"
/note="PFAM: Glutathione S-transferase, N-terminal domain;
KEGG: she:Shewmr4_3840 glutathione S-transferase,
N-terminal domain protein"
/codon_start=1
/transl_table=11
/product="glutathione S-transferase domain-containing
protein"
/protein_id="YP_001048530.1"
/db_xref="GI:126172381"
/db_xref="InterPro:IPR004045"
/db_xref="GeneID:4843088"
/translation="MELFYHPLSRYSQKVLIALYEKQANFYPRIIDLRDPFSRKEFHQ
TYPQARVPLLKTHDELLVPESSIIIEYLDRHCNNSTQLLPQEPQRNLQVRLFDRIIDN
DINNPLFQLEKLKHTEDSNEFEIKQLEKQLLVQFQRLDTQLTQHHWVCGDSFTLADCA
LIPCLSYSFQHLNLLDLDEIVRYWQQAQLRGAWMLVQEEVLLAEMEETAGIRGIP"
misc_feature complement(145229..145822)
/locus_tag="Sbal_0126"
/note="Glutathione S-transferase [Posttranslational
modification, protein turnover, chaperones]; Region: Gst;
COG0625"
/db_xref="CDD:30970"
misc_feature complement(145604..145822)
/locus_tag="Sbal_0126"
/note="Glutathione S-transferase (GST) family, N-terminal
domain; a large, diverse group of cytosolic dimeric
proteins involved in cellular detoxification by catalyzing
the conjugation of glutathione (GSH) with a wide range of
endogenous and xenobiotic...; Region: GST_N_family;
cd00570"
/db_xref="CDD:48493"
misc_feature complement(order(145613..145618,145625..145627,
145760..145765,145772..145777,145781..145786,
145790..145792))
/locus_tag="Sbal_0126"
/note="C-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:48493"
misc_feature complement(order(145628..145633,145667..145675,
145790..145792))
/locus_tag="Sbal_0126"
/note="GSH binding site (G-site) [chemical binding]; other
site"
/db_xref="CDD:48493"
misc_feature complement(order(145613..145615,145622..145627,
145631..145636,145673..145675))
/locus_tag="Sbal_0126"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48493"
misc_feature complement(145268..145546)
/locus_tag="Sbal_0126"
/note="C-terminal, alpha helical domain of the Glutathione
S-transferase family; Region: GST_C_family; cd00299"
/db_xref="CDD:198286"
misc_feature complement(order(145322..145324,145334..145336,
145343..145348,145355..145357,145520..145522,
145541..145543))
/locus_tag="Sbal_0126"
/note="N-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:198286"
misc_feature complement(order(145409..145411,145517..145519,
145526..145531,145538..145543))
/locus_tag="Sbal_0126"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:198286"
misc_feature complement(order(145322..145324,145331..145333,
145505..145510,145520..145522))
/locus_tag="Sbal_0126"
/note="substrate binding pocket (H-site) [chemical
binding]; other site"
/db_xref="CDD:198286"
gene 146030..146719
/locus_tag="Sbal_0127"
/db_xref="GeneID:4842100"
CDS 146030..146719
/locus_tag="Sbal_0127"
/note="KEGG: shm:Shewmr7_3932 conserved hypothetical
3-methyladenine DNA glycosylase"
/codon_start=1
/transl_table=11
/product="3-methyladenine DNA glycosylase"
/protein_id="YP_001048531.1"
/db_xref="GI:126172382"
/db_xref="GeneID:4842100"
/translation="MSQLERFSSIYARASERKGGAAGLEALLSGCLSDDEIRQYRDAE
LLSAMSRQVFQSGFVWRVVVNKWPEYEKSFFGFEPHKVLMLSPEQIQARASDATLIRH
LKKTQAIYDNALMIHDVAREHGSLAQLIAAWPTQDIIGLWALLKKRGTRLGGNTGPYF
LRGIGKDTFLLTDDVQGYFKAHKLVDAGFTSQTALKQVQAVFNQWQQESGRCLADISR
ILACSVGDNRI"
misc_feature 146141..146683
/locus_tag="Sbal_0127"
/note="Methyladenine glycosylase; Region: Adenine_glyco;
cl01059"
/db_xref="CDD:194022"
gene complement(146852..147598)
/locus_tag="Sbal_0128"
/db_xref="GeneID:4843089"
CDS complement(146852..147598)
/locus_tag="Sbal_0128"
/note="KEGG: shn:Shewana3_4047 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048532.1"
/db_xref="GI:126172383"
/db_xref="InterPro:IPR010239"
/db_xref="GeneID:4843089"
/translation="MMIMKTRTKFLLSGALLSLAMTAQAADDNQLFGGTINANVNFAS
DYVFRGESETLDGDIPVVQGTLSWNHNEGWYAGVFSSNIKFADPNLEIVTAPFIGKAG
EFGDSGFTYDVMLFSYLYPGASYSNYTELWLKVGKQFGRANLQLEVTPTVDDWFGVDG
WHGVNYALHPSYNFDNGVKISGSVGYQDLSGEGAEGWGHWNLGLSKVFYGLNFDVRYH
GSTVDTDHKVYGTQTEIFDDRFVVGISKSF"
misc_feature complement(146855..147589)
/locus_tag="Sbal_0128"
/note="conserved hypothetical protein, proteobacterial;
Region: gcw_chp; TIGR02001"
/db_xref="CDD:200150"
gene 147869..148369
/locus_tag="Sbal_0129"
/db_xref="GeneID:4843685"
CDS 147869..148369
/locus_tag="Sbal_0129"
/note="KEGG: aeh:Mlg_2336 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048533.1"
/db_xref="GI:126172384"
/db_xref="GeneID:4843685"
/translation="MNYQRHSGQFKEAILNKLSQSGLSVRQFAEQEGINLSTLYSWQK
QFNTSGLNVSKVSSSDKWSSEEKFSVVLETASLSAVELSEYCRAKGLYPEQVNGWKQA
CIAGNTSTTLTSKAKTTPGQKTDKKRINELERELRRKDKALAEAAALLVLGKKFDAYW
KEKEED"
misc_feature 147896..>148024
/locus_tag="Sbal_0129"
/note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
/db_xref="CDD:205696"
gene 148345..149409
/locus_tag="Sbal_0130"
/db_xref="GeneID:4841929"
CDS 148345..149409
/locus_tag="Sbal_0130"
/note="PFAM: Integrase, catalytic region;
KEGG: sdn:Sden_2168 integrase, catalytic region"
/codon_start=1
/transl_table=11
/product="integrase catalytic subunit"
/protein_id="YP_001048534.1"
/db_xref="GI:126172385"
/db_xref="InterPro:IPR001584"
/db_xref="GeneID:4841929"
/translation="MEGKRGRLISLTDRQKHAQWICTAVASGARQDKACDVIGLSSRT
LQRWRIDGDISADKRPTATRPEPGNKLSQAERQAVIDVCNSEEFASLPPSQIVPILAD
RGEYIASESSFYRVLHTENMLHHRGKAKPRNVHKKPTSYTAKKANEVWSWDISYLPTT
VIGKHYYLYMIEDIYSRKIVGWEVHDSETGEQAAALLERTVWSEKCLKKDVVLHSDNG
APMKSLTMRAKMYDLGVVTSRSRPRVSNDNPYSESLFRTVKYHPRWPSEGFKSLEAAR
KWVNEFVYWYNNEHRHSRIKFVTPNQRHDGLDVGILAKRKALYQTKRNEHPKRWSKEE
RNWQPIGAVELNPEQHKEAA"
misc_feature 148414..148698
/locus_tag="Sbal_0130"
/note="Winged helix-turn helix; Region: HTH_29; pfam13551"
/db_xref="CDD:205729"
misc_feature 148468..148695
/locus_tag="Sbal_0130"
/note="Homeodomain-like domain; Region: HTH_32; pfam13565"
/db_xref="CDD:205743"
misc_feature 148783..149121
/locus_tag="Sbal_0130"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
misc_feature 148792..149217
/locus_tag="Sbal_0130"
/note="DDE domain; Region: DDE_Tnp_IS240; pfam13610"
/db_xref="CDD:205788"
misc_feature 149041..149244
/locus_tag="Sbal_0130"
/note="Integrase core domain; Region: rve_3; pfam13683"
/db_xref="CDD:205859"
gene 149555..149845
/locus_tag="Sbal_0131"
/db_xref="GeneID:4842595"
CDS 149555..149845
/locus_tag="Sbal_0131"
/note="PFAM: transposase IS3/IS911 family protein;
KEGG: son:SOA0146 ISSod1, transposase OrfA"
/codon_start=1
/transl_table=11
/product="transposase IS3/IS911 family protein"
/protein_id="YP_001048535.1"
/db_xref="GI:126172386"
/db_xref="InterPro:IPR002514"
/db_xref="GeneID:4842595"
/translation="MSLKKSHKSYPQAFKDEAVLMVLEQGYSVADAAKSLGVSTSLLY
NWKEKHEALKQGITLEESERDELKRLRRENKELRMEKEILKKASAFFAREMK"
misc_feature 149564..>149710
/locus_tag="Sbal_0131"
/note="Transposase; Region: HTH_Tnp_1; pfam01527"
/db_xref="CDD:201841"
misc_feature 149576..>149728
/locus_tag="Sbal_0131"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: COG2963"
/db_xref="CDD:32783"
misc_feature order(149675..149680,149684..149692)
/locus_tag="Sbal_0131"
/note="DNA-binding interface [nucleotide binding]; DNA
binding site"
/db_xref="CDD:119388"
gene 149905..150714
/locus_tag="Sbal_0132"
/db_xref="GeneID:4843190"
CDS 149905..150714
/locus_tag="Sbal_0132"
/note="PFAM: Integrase, catalytic region;
KEGG: sdn:Sden_3021 integrase, catalytic region"
/codon_start=1
/transl_table=11
/product="integrase catalytic subunit"
/protein_id="YP_001048536.1"
/db_xref="GI:126172387"
/db_xref="InterPro:IPR001584"
/db_xref="GeneID:4843190"
/translation="MSVSKSGYYDWHKRPANVISLETLKLYRLVRQLFKQSRGSLGNR
EMVKKLRKEGYQVGRYLVRKIMHRLRLKATQRRAYKVTTQRKHSDAVADNLLNMNFNP
VSANEVWAGDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALIKAYNL
RQPARGLVFHSDRGSQYTSKQFGRLLLSYGIRASMGDVGACWDNAVVERFFGSLKHDW
IFKVNQPTREFMKQDVTAYMKYYNLERLHSANGDLSPVEFENSQLKVSSLG"
misc_feature 149905..150702
/locus_tag="Sbal_0132"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:177368"
misc_feature 149974..150141
/locus_tag="Sbal_0132"
/note="HTH-like domain; Region: HTH_21; pfam13276"
/db_xref="CDD:205456"
misc_feature 150220..150558
/locus_tag="Sbal_0132"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
misc_feature 150526..150693
/locus_tag="Sbal_0132"
/note="Integrase core domain; Region: rve_2; pfam13333"
/db_xref="CDD:205513"
gene complement(151077..152219)
/locus_tag="Sbal_0133"
/db_xref="GeneID:4843991"
CDS complement(151077..152219)
/locus_tag="Sbal_0133"
/note="PFAM: lipolytic enzyme, G-D-S-L family;
KEGG: cvi:CV2266 probable SPI2 translocated effector"
/codon_start=1
/transl_table=11
/product="GDSL family lipase"
/protein_id="YP_001048537.1"
/db_xref="GI:126172388"
/db_xref="InterPro:IPR001087"
/db_xref="GeneID:4843991"
/translation="MPFRIVQGTIFVPLNTNTQHLNPTIPIKHVQPLLASSKYPHSLL
KYQHHKSVVKGPVSTQDTIDGPNQVTDFSHRLFEVAVNDHQERQQRLSKPLTGHDHAS
LNHIKRLVVIGDSLSDSEGRMKSKTLGIMLSSKQYHDGRFTNGFVWPDFISSPAYLNK
ELVNYAEGGAVAAKYSKLNPVFWFISNMERQIKKHDFRSNDLVILALGSNDYMTFDKK
DTQKVVHCYEKQITTLVENKKIKNILVTGIPDFTKTAYAQKQDEAYHASNSVLVSGHN
ASLSQKVTELAERYKAEGVNIQFFDFDNQFTELLDKADKAGYDTHTANSVGYVDIFGT
SKAFDPAHRHVFHDEVHPSQEVHQMLASRMSDYITGKFGKLTTIKN"
misc_feature complement(151122..151898)
/locus_tag="Sbal_0133"
/note="Fatty acyltransferase-like subfamily of the SGNH
hydrolases, a diverse family of lipases and esterases. The
tertiary fold of the enzyme is substantially different
from that of the alpha/beta hydrolase family and unique
among all known hydrolases; its...; Region:
fatty_acyltransferase_like; cd01846"
/db_xref="CDD:58521"
misc_feature complement(order(151167..151169,151176..151178,
151590..151592,151713..151715,151875..151877))
/locus_tag="Sbal_0133"
/note="active site"
/db_xref="CDD:58521"
misc_feature complement(order(151167..151169,151176..151178,
151875..151877))
/locus_tag="Sbal_0133"
/note="catalytic triad [active]"
/db_xref="CDD:58521"
misc_feature complement(order(151590..151592,151713..151715,
151875..151877))
/locus_tag="Sbal_0133"
/note="oxyanion hole [active]"
/db_xref="CDD:58521"
gene 152922..154133
/locus_tag="Sbal_0134"
/db_xref="GeneID:4843958"
CDS 152922..154133
/locus_tag="Sbal_0134"
/note="KEGG: vpa:VPA1321 cytotoxic necrotizing factor"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048538.1"
/db_xref="GI:126172389"
/db_xref="GeneID:4843958"
/translation="MPMHIFSKANSYDLLTPNLKNSDNASPIQLVSVRPLTEQERKNL
TKKNQTYSNFTKNNKSIKSANGLTKIKSLFDNSSGKNKIVSKRGLTIEVKKGSTEEAS
AQWKNDPLRNHFKSAELSLQSLLDKEAVLQGQLSPLIGKGIIDCHEKYEYLPFPITHI
QNDKNGMYVSSDTIESKTGLIYYTGDHIVPEELIPGSPLGQYFHQAVFDSNLHILAVD
NGNKGTVGISFDLNQVKEGQPILIHAGSLSGCSVVFATKSSKLFAFHAGQNNNENNDW
ITGEKGAESIAQSAGFLANDTSNTLPCTNNQELVSYLSSHFEQSAFIYCGHGDSVVSQ
SNVNCFDYDMGPKRDEARVGNAMALVSNNKGKISVNVLGDDLSIDSGSFETRSLQNST
FALFTDKEFSR"
misc_feature 153288..154109
/locus_tag="Sbal_0134"
/note="Rho-activating domain of cytotoxic necrotizing
factor; Region: CNF1; pfam05785"
/db_xref="CDD:147761"
gene complement(154264..154970)
/locus_tag="Sbal_0135"
/pseudo
/db_xref="GeneID:4841360"
gene 155332..155841
/locus_tag="Sbal_0136"
/db_xref="GeneID:4842353"
CDS 155332..155841
/locus_tag="Sbal_0136"
/note="TIGRFAM: transcription elongation factor GreB;
PFAM: transcription elongation factor GreA/GreB domain
protein;
KEGG: she:Shewmr4_3810 transcription elongation factor
GreB"
/codon_start=1
/transl_table=11
/product="transcription elongation factor GreB"
/protein_id="YP_001048539.1"
/db_xref="GI:126172390"
/db_xref="InterPro:IPR001437"
/db_xref="InterPro:IPR006358"
/db_xref="GeneID:4842353"
/translation="MSMKAHLITRQGWQTLDKELKYLWKEYRPQITLKVQEAAAQGDR
SENADYTYNKRLLRQIDGRVRYLVKRLEELKIVDYSPQQEGKIFFGAWFELENEAGDR
VRYRIVGKDELDTKLGYITIDSPMARALIGKQVDDEVVVQTPSGPKEWYINQIRYTPF
ETTLASEAD"
misc_feature 155335..155802
/locus_tag="Sbal_0136"
/note="transcription elongation factor GreB; Reviewed;
Region: greB; PRK01885"
/db_xref="CDD:179345"
misc_feature 155353..155559
/locus_tag="Sbal_0136"
/note="Transcription elongation factor, N-terminal;
Region: GreA_GreB_N; pfam03449"
/db_xref="CDD:190636"
misc_feature 155575..155802
/locus_tag="Sbal_0136"
/note="Transcription elongation factor, GreA/GreB, C-term;
Region: GreA_GreB; pfam01272"
/db_xref="CDD:201702"
gene 156005..158368
/locus_tag="Sbal_0137"
/db_xref="GeneID:4842584"
CDS 156005..158368
/locus_tag="Sbal_0137"
/note="PFAM: RNA binding S1 domain protein;
SMART: Resolvase, RNase H domain protein fold;
KEGG: son:SO4629 hypothetical protein"
/codon_start=1
/transl_table=11
/product="RNA-binding S1 domain-containing protein"
/protein_id="YP_001048540.1"
/db_xref="GI:126172391"
/db_xref="InterPro:IPR003029"
/db_xref="InterPro:IPR006641"
/db_xref="GeneID:4842584"
/translation="MQTNAHNIAQIIAQELNVREQQVAATITLLDDGATVPFVARYRK
EATGGLDDTQLRTLYTRLGYLRELNDRRQVILSSIQAQGKLTPELQRAIDDADSKTRL
EDLYLPFKPKRRTKGQIAIEAGLEPLADALLADRSADVEAKAAGYINSDAGFVDVKAV
LEGARYILMERYAEDAELLRKVREHLSQNSVLESRLIAGKEKEGAKFRDYFEHTEQLA
KIPSHRALAMLRGRNEGFLALSMNADPAAEAGQGSYCEVIISDHLGLKLGDSSVDQWL
KTVVTATWRIKIALQMETEFISQMRERAEAEAIKVFARNLGDLLMAAPAGAKATMGLD
PGLRTGVKVAVVDNTGKMLCHATIFPHAPQNLWEKSIRTLANLVKMHKVELIAIGNGT
ASRETDKLAAELIAAVKDTHPQLTKVMVSEAGASVYSASELAALEFPDLDVSIRGAVS
IARRLQDPLAELVKIEPKSIGVGQYQHDVSQSQLSGSLEAVVEDCVNGVGVDLNMASA
PLLSQVAGLNKTLAKNVVDYRDANGQFKNRKELLKVPRLGPKAYEQAAGFLRIREGDN
PLDASSVHPEAYSLVETIAKTKQVELASLMGNSDLLRSIKPEEFITAEFGLPTVTDIL
AELDKPGRDPRGEFKTAKFKDGVEELKHLKPEMVLEGVVTNVTNFGAFVDIGVHQDGL
VHISSLTDKFISDPHTVVKAGDVVKVKVMEVDVERRRIGLSMRLDEAIDQSKSQQRPH
NPARTHNSKAPQSAKPAARPTQKQAPKAPANAAMGNAFADAFAKLKK"
misc_feature 156023..158236
/locus_tag="Sbal_0137"
/note="Transcriptional accessory protein [Transcription];
Region: Tex; COG2183"
/db_xref="CDD:32366"
misc_feature 156038..156616
/locus_tag="Sbal_0137"
/note="Tex-like protein N-terminal domain; Region: Tex_N;
pfam09371"
/db_xref="CDD:150144"
misc_feature 156986..157291
/locus_tag="Sbal_0137"
/note="Likely ribonuclease with RNase H fold; Region:
YqgFc; smart00732"
/db_xref="CDD:128971"
misc_feature 157973..158173
/locus_tag="Sbal_0137"
/note="S1_Tex: The C-terminal S1 domain of a transcription
accessory factor called Tex, which has been characterized
in Bordetella pertussis and Pseudomonas aeruginosa. The
tex gene is essential in Bortella pertusis and is named
for its role in toxin expression; Region: S1_Tex; cd05685"
/db_xref="CDD:88440"
misc_feature order(157994..157996,158018..158020,158048..158050,
158054..158056)
/locus_tag="Sbal_0137"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88440"
gene 158586..160550
/locus_tag="Sbal_0138"
/db_xref="GeneID:4841812"
CDS 158586..160550
/locus_tag="Sbal_0138"
/note="PFAM: sulfatase;
KEGG: son:SO4628 sulfatase"
/codon_start=1
/transl_table=11
/product="sulfatase"
/protein_id="YP_001048541.1"
/db_xref="GI:126172392"
/db_xref="InterPro:IPR000917"
/db_xref="GeneID:4841812"
/translation="MQSGLSPRGHNNAHGPFRAIFIFSLLVLFITTASRIAFGLWQAD
RVAAVDGWSHLLIQGFRIDIATLCWLWGIAALGTALFSGDHLIGRLWQPILRVWLTVG
LWIILFLEASTPAFIEEYGIRPNRLYVEYLIYPKEVLSMLWAGRKLELIFSVLLTIGT
LWGGWVLSGKLTKNLRFPRWYWRPVLAVLIIATTLLGARSTLGHRPINPAMVAFADDP
LVNSLVINSAYSLVFAIKQMGSEEDASKVYGKLDNAEIIATIRQESGRPESAFTSTDI
PSLSFNQASYTGKPKNLVILLQESLGARFVGSLGGLPLTPNIDALSKEGWYFDNLYAT
GTRSVRGIEAVTTGFTPTPARAVVKLGKSQVGFFSIAELLKNHGYTTQFIYGGESHFD
NMRSFFLGNGFSDIIDQKDYKSPAFVGSWGASDEDLMRKANSEFERLHSEGKPFFSLV
FSSSNHDPFEFPDDRIELYEQPKQTRNNAAKYADYAIGEFFKLAKNADYWKDTIFIVV
ADHDSRVGGADLVPVSRFRIPGLILGDNLAPKRDHRIVSQIDLPPTLLSLIGISDSYP
MLGRDLTQVSDDWPGRALMQYDKNFALMEGKDVVILQPEKAAQGFEYNEKTEQLTPYA
PAAAALEKKALSWALWGSLAYQQELYRLPK"
misc_feature 158643..160439
/locus_tag="Sbal_0138"
/note="Phosphoglycerol transferase and related proteins,
alkaline phosphatase superfamily [Cell envelope
biogenesis, outer membrane]; Region: MdoB; COG1368"
/db_xref="CDD:31559"
misc_feature 159456..160358
/locus_tag="Sbal_0138"
/note="Sulfatase; Region: Sulfatase; pfam00884"
/db_xref="CDD:201490"
gene complement(160648..161205)
/locus_tag="Sbal_0139"
/db_xref="GeneID:4841369"
CDS complement(160648..161205)
/locus_tag="Sbal_0139"
/note="KEGG: she:Shewmr4_3807 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048542.1"
/db_xref="GI:126172393"
/db_xref="GeneID:4841369"
/translation="MLVVSNYPQVPLATSNVATDSARVDNQLKPVVIPPQAATKGHEE
RAFNPQNERTADQTQQQTKTLENNQQQVQEKQQQQQSSQQQSQQQQEKKAPLVVAERV
LPKTLKVAARGQAALQRKDIRLKVSQGAANYASSNAKANTSSAARQSLQGEPTQFYQQ
LGQRIGQFYQQQTQPEQESIMSTWI"
gene complement(161267..161989)
/locus_tag="Sbal_0140"
/db_xref="GeneID:4845351"
CDS complement(161267..161989)
/locus_tag="Sbal_0140"
/note="TIGRFAM: bioH protein;
PFAM: alpha/beta hydrolase fold;
KEGG: shn:Shewana3_4010 BioH protein"
/codon_start=1
/transl_table=11
/product="bioH protein"
/protein_id="YP_001048543.1"
/db_xref="GI:126172394"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR010076"
/db_xref="GeneID:4845351"
/translation="MLHGWGVNSAVFTPLHESLSQYRVHYVDLPGFGHSQMVEGDLLA
WVDVLVAALPEHAIWAGWSLGGLVATQAALSYPQKIKGLITIASSPCFMAREDEAWPG
IPPQVLNQFREQLGQNLPKTIERFLAIQAMGSETAKEDIKRLRDLVLARPLPDARALT
QGLTMLTDIDLRQQLTGLQQPWLRIWGRLDGLVPKRVQPKMPITPQIEDVMLAKASHA
PFISHQQEFLQIFMPWLALQTR"
misc_feature complement(161297..161989)
/locus_tag="Sbal_0140"
/note="pimelyl-[acyl-carrier protein] methyl ester
esterase; Region: bioH; TIGR01738"
/db_xref="CDD:130799"
gene 162094..162885
/locus_tag="Sbal_0141"
/db_xref="GeneID:4844611"
CDS 162094..162885
/locus_tag="Sbal_0141"
/note="KEGG: shm:Shewmr7_3881 competence protein ComF"
/codon_start=1
/transl_table=11
/product="competence protein ComF"
/protein_id="YP_001048544.1"
/db_xref="GI:126172395"
/db_xref="GeneID:4844611"
/translation="MSRFVKRIWPPSAWRIVCLGYQLSTRWLAGSLPNRCLLCHQSIP
IPETGICIVCLQSGLYHGPICLGCGKSMQIEVDYCGECQKRQPRKVVAPCSYHQGLGA
WIGAIKYQGQLAALPVLCRALVARIKLLEQQGLIMLPQAIVPVPLHPKRLQQRGFNQA
WLIAHELSQLLQLPLVSEGLTRQQDTRPQAGLSGAQRRRNLHDAFMLADDFAFQRIAL
VDDVVTTGTTVSEIARLFEARYVHVQVWCLARAEAPGLLDDLDNE"
misc_feature 162184..162843
/locus_tag="Sbal_0141"
/note="DNA utilization protein GntX; Provisional; Region:
PRK11595"
/db_xref="CDD:183221"
gene 163127..163705
/locus_tag="Sbal_0142"
/db_xref="GeneID:4845606"
CDS 163127..163705
/locus_tag="Sbal_0142"
/note="cytoplasmic protein that may be involved in the
utilization of double-stranded DNA as a carbon source"
/codon_start=1
/transl_table=11
/product="putative DNA uptake protein"
/protein_id="YP_001048545.1"
/db_xref="GI:126172396"
/db_xref="InterPro:IPR000361"
/db_xref="InterPro:IPR001075"
/db_xref="GeneID:4845606"
/translation="MITISDAAQAHFVKLLADQPEGTHIRVFVISPGTSQAECGVSYC
PPDAVESDDIEIEFTGFNAMVDEKSAPFLEDATIDFVTDQLGSQLTLKAPNAKMRKVS
GDAPLVERIEYVIQSEINPQLAGHGGNIMLVEITKEGVAVLQFGGGCNGCSQVDITLK
DGIEKQLLDMFPGELTGVRDVTDHQHGEHSYA"
misc_feature 163127..163699
/locus_tag="Sbal_0142"
/note="Fe/S biogenesis protein NfuA; Provisional; Region:
PRK11190"
/db_xref="CDD:183027"
misc_feature 163127..163417
/locus_tag="Sbal_0142"
/note="Fe-S cluster assembly scaffold protein
[Posttranslational modification, protein turnover,
chaperones]; Region: sufA; COG0316"
/db_xref="CDD:30664"
misc_feature 163418..163696
/locus_tag="Sbal_0142"
/note="Thioredoxin-like proteins and domains
[Posttranslational modification, protein turnover,
chaperones]; Region: COG0694"
/db_xref="CDD:31038"
gene complement(163789..165726)
/locus_tag="Sbal_0143"
/db_xref="GeneID:4844186"
CDS complement(163789..165726)
/locus_tag="Sbal_0143"
/note="PFAM: peptidase S15; peptidase S9, prolyl
oligopeptidase active site domain protein;
phospholipase/Carboxylesterase;
KEGG: she:Shewmr4_3803 peptidase S9, prolyl oligopeptidase
active site domain protein"
/codon_start=1
/transl_table=11
/product="peptidase S9 prolyl oligopeptidase"
/protein_id="YP_001048546.1"
/db_xref="GI:126172397"
/db_xref="InterPro:IPR000383"
/db_xref="InterPro:IPR001375"
/db_xref="InterPro:IPR003140"
/db_xref="GeneID:4844186"
/translation="MKRILPLLFLWLCNHAVADTASQLPVEAFASIPDVSSVQLSPNG
KKLASVVRVDQAKLKGTVVSIQDIETGEKSIPLHTDNQKFVILSLQWANDNILLISAK
FPANRYGTPTTETRLVKYDLTTKKTSSVLPRSVLDRLNWIPQHQGQIIDLMADDPDNI
LLSLDGMGENVGEDSVLKVNLAQGKSSYTQNAKKKIISWITDRQHKVRISIYNDDTEY
RIYEQAEQKRDSRLLWTFKAFSEDSIWPLGFDADPNILYVRAYHQGFEAIFKVNLTDP
KLTKELVYANENTDVEGNLLYSKLKKKVIGISEGDGEEYTFWEKEYVGLQNGLKAVLP
NAHNYITQFSADERRYIVYSTSSTEPGTYYFGDRDEKTLYPIANRYGRLKSELLADTQ
YLTYEARDKLKIDAYLTVPKGLEAKQLPTIIFPHGGPISYDSNDFDYWAQFFANRGYA
VFRMNFRGSAGYGYEFMKAGLKSWGLEMQNDVEDGTRYLIAQGISDPKRICIVGASYG
GYAALMGAAMTPDLYRCAVSVAGVTDVAYLVKSSRRFTNYKVVKEQIGDDFDALYDRS
PISKADKINIPVLLLHGDKDRVVKVQHSREMYDELKSLKKPVEYIELENGDHYLSNND
NRLATFKALDKFLADNLNPKL"
misc_feature complement(163804..165666)
/locus_tag="Sbal_0143"
/note="Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
[Amino acid transport and metabolism]; Region: DAP2;
COG1506"
/db_xref="CDD:31695"
misc_feature complement(163801..164424)
/locus_tag="Sbal_0143"
/note="Prolyl oligopeptidase family; Region: Peptidase_S9;
pfam00326"
/db_xref="CDD:201156"
gene complement(165807..167174)
/locus_tag="Sbal_0144"
/db_xref="GeneID:4845768"
CDS complement(165807..167174)
/locus_tag="Sbal_0144"
/note="TIGRFAM: MATE efflux family protein;
PFAM: multi antimicrobial extrusion protein MatE;
KEGG: she:Shewmr4_3802 MATE efflux family protein"
/codon_start=1
/transl_table=11
/product="MATE efflux family protein"
/protein_id="YP_001048547.1"
/db_xref="GI:126172398"
/db_xref="InterPro:IPR002528"
/db_xref="GeneID:4845768"
/translation="MNTAKSTWLDLMLNCAKNRQLLALALPMILSNITIPLLGLVDTA
VIGHLSEAYYLGGVAVGSTIITLIIWLLGFLRMATTGLVAQAYGANDLHAQHKLLVQG
AMLAVLLGAGVIALQVPILNLALGLSEASSEVERYCREYFQVRIWSTPFALLNLVMLG
WLLGRQQPKAAMWQLILANLANIILDVVFVLGLGWGVKGAALASVFADITAFSVALTM
VLQQLKREADFHLSQLLPHVTLTGYGKLLRLNTDIFIRSLCLQAAFAFMTFHGAGLGD
NTVAANAVLLNLLLLISYALDGIAYYAEAEVGRAYGQKQAEQLREAVILAWSWSAITA
LGFCAVFSLFGSNIIALLTSINEVRATAQTYLIWLIFLPLWSFSSYLFDGVYIGAAKG
KVMRNSMILATFGAFFPTWYLLQQLLLPEQGNHALWAAMSVFMIARSLTLTGHYYFSK
DFLNK"
misc_feature complement(165849..167129)
/locus_tag="Sbal_0144"
/note="DNA-damage-inducible SOS response protein;
Provisional; Region: PRK10367"
/db_xref="CDD:182413"
misc_feature complement(<166893..167096)
/locus_tag="Sbal_0144"
/note="MatE; Region: MatE; pfam01554"
/db_xref="CDD:190033"
misc_feature complement(165951..166418)
/locus_tag="Sbal_0144"
/note="MatE; Region: MatE; pfam01554"
/db_xref="CDD:190033"
gene 167197..168243
/locus_tag="Sbal_0145"
/db_xref="GeneID:4842799"
CDS 167197..168243
/locus_tag="Sbal_0145"
/note="PFAM: polysaccharide deacetylase;
KEGG: she:Shewmr4_3801 polysaccharide deacetylase"
/codon_start=1
/transl_table=11
/product="polysaccharide deacetylase"
/protein_id="YP_001048548.1"
/db_xref="GI:126172399"
/db_xref="InterPro:IPR002509"
/db_xref="GeneID:4842799"
/translation="MVKRVLLALIGLMTFSAHAVVILQYHHVSETTPAATSVTPAQFR
EQMQFLADDGFKVIPLSQVVEAIKQKQDLPAKTVAITFDDGYRSIATTAHPILKEFGF
PYTLFVAIEPIKQKFTEMMTWDELITLSKEGADIANHSWAHEHLIRALENESQAQWLA
RVKANILDTEKAIADATGHNFKMLAYPYGEYNQALQDMLTENGFVALGQQSGAAGPYS
PLTALPRFPVAGQYADLKSLKAKLYSLNMPVIAQSPSDPELKGGHWRPELKVTLDMSD
ISAKQVMCYIQGQGSKQPTWLSESEFSVQADLALPAGRSRYNCTAPSKARNGYYWFSQ
PWVRPKDDGSWVKE"
misc_feature 167422..167892
/locus_tag="Sbal_0145"
/note="Putative catalytic NodB homology domain of
uncharacterized bacterial polysaccharide deacetylases
which consist of a 5-stranded beta/alpha barrel; Region:
CE4_DAC_u4_5s; cd10973"
/db_xref="CDD:213028"
misc_feature order(167443..167448,167611..167613,167623..167625,
167755..167763)
/locus_tag="Sbal_0145"
/note="putative active site [active]"
/db_xref="CDD:213028"
misc_feature order(167446..167448,167611..167613,167623..167625)
/locus_tag="Sbal_0145"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:213028"
gene complement(168244..168876)
/locus_tag="Sbal_0146"
/db_xref="GeneID:4842446"
CDS complement(168244..168876)
/locus_tag="Sbal_0146"
/note="PFAM: electron transport protein SCO1/SenC;
KEGG: shn:Shewana3_3999 electron transport protein
SCO1/SenC"
/codon_start=1
/transl_table=11
/product="electron transport protein SCO1/SenC"
/protein_id="YP_001048549.1"
/db_xref="GI:126172400"
/db_xref="InterPro:IPR003782"
/db_xref="GeneID:4842446"
/translation="MQKRILVIAILLIGLGGLFAVKFNPPKPIELESGFLFPQAYELA
PFELVDQHQQAFTNASLQGKWSLFFIGFTFCPDVCPTTLNKLAAAYPDLNKIAPLQVV
FLSVDPKRDTPDKLLTYVNFFNPEFKAVTGEQTQIFPLTRSLGLTYAMVGEGENYQVD
HSAGYVLVSPQGTRVAVFKPTAALGKPPQVLNDEIISDFRKIVAQYKPSR"
misc_feature complement(168259..168765)
/locus_tag="Sbal_0146"
/note="Uncharacterized protein SCO1/SenC/PrrC, involved in
biogenesis of respiratory and photosynthetic systems
[General function prediction only]; Region: COG1999"
/db_xref="CDD:32182"
misc_feature complement(168337..168744)
/locus_tag="Sbal_0146"
/note="SCO (an acronym for Synthesis of Cytochrome c
Oxidase) family; composed of proteins similar to Sco1, a
membrane-anchored protein possessing a soluble domain with
a TRX fold. Members of this family are required for the
proper assembly of cytochrome c...; Region: SCO; cd02968"
/db_xref="CDD:48517"
misc_feature complement(order(168394..168396,168640..168642,
168652..168654))
/locus_tag="Sbal_0146"
/note="Cu(I) binding site [ion binding]; other site"
/db_xref="CDD:48517"
gene complement(168924..169829)
/locus_tag="Sbal_0147"
/db_xref="GeneID:4842826"
CDS complement(168924..169829)
/locus_tag="Sbal_0147"
/note="converts protoheme IX and farnesyl diphosphate to
heme O"
/codon_start=1
/transl_table=11
/product="protoheme IX farnesyltransferase"
/protein_id="YP_001048550.1"
/db_xref="GI:126172401"
/db_xref="InterPro:IPR000537"
/db_xref="InterPro:IPR006369"
/db_xref="GeneID:4842826"
/translation="MAKPLSITSSLPTFSVTWRAYFEMTKPKVVALMLLTVLVGMCLA
VPHAVPVQPLLAGMLGIAMMAGSAAALNHLIDRRIDGLMARTYNRPLPKGRISATRAL
IFAASLGSLGFIVLYSLVNPLTAWLTFASLIGYALVYTAYLKRATSQNIVIGGLAGAM
PPLLGWTAVTNEFHGHALLLVIIIFTWTPPHFWALAIHRRAEYAKVDIPMLPVTHGVE
FTKTCILLYTVLLAIACLLPVLVGMCGPVYFVCSSLLSTGFIYKAWQLKYRDHDGLAM
QVFRFSIYHLMLLFMALLLDHYLWN"
misc_feature complement(168981..169805)
/locus_tag="Sbal_0147"
/note="protoheme IX farnesyltransferase; Provisional;
Region: PRK04375"
/db_xref="CDD:179840"
gene complement(169844..170821)
/locus_tag="Sbal_0148"
/db_xref="GeneID:4843394"
CDS complement(169844..170821)
/locus_tag="Sbal_0148"
/note="PFAM: cytochrome oxidase assembly;
KEGG: son:SO4613 cytochrome oxidase assembly protein,
putative"
/codon_start=1
/transl_table=11
/product="cytochrome oxidase assembly"
/protein_id="YP_001048551.1"
/db_xref="GI:126172402"
/db_xref="InterPro:IPR003780"
/db_xref="GeneID:4843394"
/translation="MQLTWVLRLTLVFTLLVILMGAYTRLSDAGLGCPDWPGCYGHIK
VPTQDHEIAHAQTIFPDHDIHPEKAWLEMIHRYIAGGLGLLVLFILVLCLKTPEAPKK
LPLIIVLLILFQAALGMWTVTMRLMPIVVMSHLIGGFSLISLLLLLYLRTRPRRIFNS
ETHARNLAPLALVSLFVLVGQIMLGAWTSSNYAALACTSLPICEGNWVDNLAIAEAFS
PFQGQHHSFEFGVLDYPARMTIHIAHRIGAVVTASLLLVLAYRLFVGAAGMRALSLLL
VGLVILQVSLGISNVVMHLPLGIAVSHNGGAALLLLTLVAINYFLWRKA"
misc_feature complement(169904..170764)
/locus_tag="Sbal_0148"
/note="Cytochrome oxidase assembly protein; Region:
COX15-CtaA; pfam02628"
/db_xref="CDD:202319"
misc_feature complement(169904..170761)
/locus_tag="Sbal_0148"
/note="Uncharacterized protein required for cytochrome
oxidase assembly [Posttranslational modification, protein
turnover, chaperones]; Region: CtaA; COG1612"
/db_xref="CDD:31800"
gene complement(170821..171366)
/locus_tag="Sbal_0149"
/db_xref="GeneID:4842380"
CDS complement(170821..171366)
/locus_tag="Sbal_0149"
/note="KEGG: son:SO4612 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048552.1"
/db_xref="GI:126172403"
/db_xref="GeneID:4842380"
/translation="MNSQNKSKHKALGLLLLAFIAPVVIAKLVLSLNLYHGGATNHGE
LINPETSYASLGVENPNPKEWQLLYLLPAQCDDACRERLYILRQSHTALGPDQARVEP
LILTHPDSDLNALSAFHFNTRPANAGLSHWLDEQQLIIVDPLGSLVLRYPQVQGREAH
LAQGKDLVADLRKLLKLSRVD"
gene complement(171458..172222)
/locus_tag="Sbal_0150"
/db_xref="GeneID:4841930"
CDS complement(171458..172222)
/locus_tag="Sbal_0150"
/note="KEGG: she:Shewmr4_3796 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048553.1"
/db_xref="GI:126172404"
/db_xref="InterPro:IPR002994"
/db_xref="GeneID:4841930"
/translation="MQYPYVLLNKLTVFLLILTVAVFVMLVKLGLWQLARGEEKTMLL
AQMEARQSLLPLSFEQLQLKIDKEGVTGYRLHVHAIPASSQIWLLDNQIYQGQVGYLA
FQPLQVAAGQPWVLVELGFVAASSHRDELPHISPLSGELNIEGRLYQKQINPLSQALM
AETGTSVRFQNLNIPEMAQLLGHPLLDAVLQPDELPALALPHPWQPFPLSAQKHWGYA
LQWFSMAAVFAGLMLWQGIKYVKRHSAETIANSRSE"
misc_feature complement(171530..172147)
/locus_tag="Sbal_0150"
/note="SURF1 superfamily. Surf1/Shy1 has been implicated
in the posttranslational steps of the biogenesis of the
mitochondrially-encoded Cox1 subunit of cytochrome c
oxidase (complex IV). Cytochrome c oxidase (complex IV),
the terminal electron-transferring...; Region: SURF1;
cd06662"
/db_xref="CDD:119401"
gene complement(172444..173319)
/locus_tag="Sbal_0151"
/db_xref="GeneID:4843508"
CDS complement(172444..173319)
/locus_tag="Sbal_0151"
/note="PFAM: cytochrome c oxidase, subunit III;
KEGG: shm:Shewmr7_3867 cytochrome c oxidase, subunit III"
/codon_start=1
/transl_table=11
/product="cytochrome c oxidase subunit III"
/protein_id="YP_001048554.1"
/db_xref="GI:126172405"
/db_xref="InterPro:IPR000298"
/db_xref="GeneID:4843508"
/translation="MTTKHENYYVPAQSAWPIIGAIGLFLIALGAGHFVHQLKSGASG
GGYILLAGIAVILFMLVGWFRTVINESMTGLYSHQMDRSFRQGMSWFIFSEVMFFGAF
FGALFYARMVAVPWLGGASNNAMTHEVLWPQFEAVWPLLTTPDGTKTEAMPWNGLPLI
NTIVLLTSSVTLHFSHVSLEKGKRSAITLWLGITILLGMGFLALQAEEYMHAYHEMGL
TLTSGVYGNTFFLLTGFHGMHVSLGTLFLLVLFFRVLKGHFSADKHFAFQAGSWYWHF
VDVVWLCLFIFVYVL"
misc_feature complement(172450..173193)
/locus_tag="Sbal_0151"
/note="Cytochrome c oxidase subunit III. Cytochrome c
oxidase (CcO), the terminal oxidase in the respiratory
chains of eukaryotes and most bacteria, is a multi-chain
transmembrane protein located in the inner membrane of
mitochondria and the cell membrane of...; Region:
Cyt_c_Oxidase_III; cd01665"
/db_xref="CDD:29485"
misc_feature complement(order(173101..173106,173113..173115,
173122..173127,173134..173136))
/locus_tag="Sbal_0151"
/note="Subunit III/VIIa interface [polypeptide binding];
other site"
/db_xref="CDD:29485"
misc_feature complement(order(172522..172527,172561..172563,
172582..172584,173047..173049,173056..173061,
173092..173094,173107..173109,173116..173121,
173128..173133))
/locus_tag="Sbal_0151"
/note="Phospholipid binding site [chemical binding]; other
site"
/db_xref="CDD:29485"
misc_feature complement(order(172627..172629,172639..172641,
172648..172653,172996..172998,173014..173019,
173029..173031,173038..173040,173071..173076,
173083..173085))
/locus_tag="Sbal_0151"
/note="Subunit I/III interface [polypeptide binding];
other site"
/db_xref="CDD:29485"
misc_feature complement(172897..172899)
/locus_tag="Sbal_0151"
/note="Subunit III/VIb interface [polypeptide binding];
other site"
/db_xref="CDD:29485"
misc_feature complement(order(172651..172659,172684..172692,
172720..172722,172798..172800,172849..172857))
/locus_tag="Sbal_0151"
/note="Subunit III/VIa interface; other site"
/db_xref="CDD:29485"
misc_feature complement(172762..172764)
/locus_tag="Sbal_0151"
/note="Subunit III/Vb interface [polypeptide binding];
other site"
/db_xref="CDD:29485"
gene complement(173316..173897)
/locus_tag="Sbal_0152"
/db_xref="GeneID:4842692"
CDS complement(173316..173897)
/locus_tag="Sbal_0152"
/note="involved in the insertion of copper into subunit I
of cytochrome C oxidase"
/codon_start=1
/transl_table=11
/product="cytochrome C oxidase assembly protein"
/protein_id="YP_001048555.1"
/db_xref="GI:126172406"
/db_xref="InterPro:IPR007533"
/db_xref="GeneID:4842692"
/translation="MTNHHQPEKPKSNRKLISMLVMGCIGMFGFGFALVPLYDVLCEK
LGINGKTSNTASSYQAITIDTSRIVTVEFISQVQTGMPWKFEPQTKRLEVHPGELIHT
AFLARNVSDRATVGQAIPSISPGQGAAYFNKTECFCFNQQHLAASTSAELPLIFFVDP
QLPESIHTLTLSYTLYDITDKQLASAIEQGAAK"
misc_feature complement(173322..173888)
/locus_tag="Sbal_0152"
/note="cytochrome C oxidase assembly protein; Provisional;
Region: PRK05089"
/db_xref="CDD:179930"
gene complement(173899..175491)
/locus_tag="Sbal_0153"
/db_xref="GeneID:4843852"
CDS complement(173899..175491)
/locus_tag="Sbal_0153"
/EC_number="1.9.3.1"
/note="PFAM: cytochrome c oxidase, subunit I;
KEGG: son:SO4607 cytochrome c oxidase, subunit I"
/codon_start=1
/transl_table=11
/product="cytochrome-c oxidase"
/protein_id="YP_001048556.1"
/db_xref="GI:126172407"
/db_xref="InterPro:IPR000883"
/db_xref="GeneID:4843852"
/translation="MSTTTQDQTAAHDDHHHGAPKGIMRWVLTTNHKDIGTLYLWFSF
IMFLTGGAMAMVIRAELFQPGLQLVEPNFFNQMTTVHGLIMVFGAVMPAFTGLANWLI
PMMIGAPDMALPRMNNWSFWILPFAFTILLSSLFMEGGGPNFGWTFYAPLSTTYSPDS
TALFVFSIHIMGISSIMGAINVIVTIVNLRAPGMTWMKLPLFVWTWLITAFLLIAVMP
VLAGAVTMVLTDKFFGTSFFEAAGGGDPVMFQHIFWFFGHPEVYIMILPSFGIISAIV
PAFSRKPLFGYASMVYATASIAILSFLVWAHHMFTTGMPVFAELFFMYCTMLIAVPTG
VKVFNWVATMWRGSLSFETPMLFAVAFIILFTIGGFSGLMLAITPADFQYHDTYFVVA
HFHYVLVTGAIFSIMAAAYYWLPKWTGHMYNERLGQWHFWCSVISVNVLFFPMHFLGL
AGMPRRIPDYSIQFADVNQIVSIGGFAFGLSQLIFLVLVIKCIRGGEKAPAKPWEGSE
GLEWTLPSPAPYHSFTTPPEVK"
misc_feature complement(173905..175440)
/locus_tag="Sbal_0153"
/note="Heme/copper-type cytochrome/quinol oxidases,
subunit 1 [Energy production and conversion]; Region:
CyoB; COG0843"
/db_xref="CDD:31185"
misc_feature complement(173950..175404)
/locus_tag="Sbal_0153"
/note="Cytochrome C oxidase subunit I. Cytochrome c
oxidase (CcO), the terminal oxidase in the respiratory
chains of eukaryotes and most bacteria, is a multi-chain
transmembrane protein located in the inner membrane of
mitochondria and the cell membrane of...; Region:
Cyt_c_Oxidase_I; cd01663"
/db_xref="CDD:29934"
misc_feature complement(order(174583..174585,174595..174600,
174607..174609,174616..174618,174727..174729,
174757..174759,174763..174768,174781..174789,
174814..174816,174838..174840,174847..174849,
174868..174870,174928..174930,174940..174942,
174994..174996,175006..175008,175126..175128,
175147..175149,175153..175155,175165..175167,
175402..175404))
/locus_tag="Sbal_0153"
/note="Subunit I/III interface [polypeptide binding];
other site"
/db_xref="CDD:29934"
misc_feature complement(order(174937..174939,174949..174951,
174967..174972,175132..175134,175141..175143,
175162..175164,175195..175197,175375..175377))
/locus_tag="Sbal_0153"
/note="D-pathway; other site"
/db_xref="CDD:29934"
misc_feature complement(order(174013..174015,174022..174024,
174241..174243,175084..175089,175324..175326,
175336..175338,175345..175347,175357..175359))
/locus_tag="Sbal_0153"
/note="Subunit I/VIIc interface [polypeptide binding];
other site"
/db_xref="CDD:29934"
misc_feature complement(order(174052..174054,174106..174108,
174205..174210,174217..174219,175303..175308,
175315..175317))
/locus_tag="Sbal_0153"
/note="Subunit I/IV interface [polypeptide binding]; other
site"
/db_xref="CDD:29934"
misc_feature complement(order(174091..174096,174121..174129,
174139..174144,174334..174348,174352..174354,
174358..174363,174415..174417,174451..174459,
174478..174480,174487..174489,174511..174513,
174535..174537,174544..174546,174553..174561,
174634..174639,174646..174648,174757..174759,
175267..175269))
/locus_tag="Sbal_0153"
/note="Subunit I/II interface [polypeptide binding]; other
site"
/db_xref="CDD:29934"
misc_feature complement(order(174058..174060,174169..174171,
174295..174297,174307..174309,175249..175251))
/locus_tag="Sbal_0153"
/note="Low-spin heme (heme a) binding site [chemical
binding]; other site"
/db_xref="CDD:29934"
misc_feature complement(order(175084..175086,175093..175095))
/locus_tag="Sbal_0153"
/note="Subunit I/VIIa interface [polypeptide binding];
other site"
/db_xref="CDD:29934"
misc_feature complement(order(174790..174801,175027..175029))
/locus_tag="Sbal_0153"
/note="Subunit I/VIa interface [polypeptide binding];
other site"
/db_xref="CDD:29934"
misc_feature complement(order(174583..174585,174595..174600,
174607..174609,174616..174618,174727..174729,
174847..174849,174868..174870))
/locus_tag="Sbal_0153"
/note="Dimer interface; other site"
/db_xref="CDD:29934"
misc_feature complement(order(174127..174129,174334..174339,
174349..174351,174739..174744,174757..174759))
/locus_tag="Sbal_0153"
/note="Putative water exit pathway; other site"
/db_xref="CDD:29934"
misc_feature complement(order(174313..174315,174568..174573,
174718..174720))
/locus_tag="Sbal_0153"
/note="Binuclear center (heme a3/CuB) [ion binding]; other
site"
/db_xref="CDD:29934"
misc_feature complement(order(174484..174486,174493..174495,
174568..174573,174673..174675,174706..174708,
174718..174720))
/locus_tag="Sbal_0153"
/note="K-pathway; other site"
/db_xref="CDD:29934"
misc_feature complement(order(173953..173955,174631..174633,
174643..174645))
/locus_tag="Sbal_0153"
/note="Subunit I/Vb interface [polypeptide binding]; other
site"
/db_xref="CDD:29934"
misc_feature complement(order(174124..174129,174334..174339,
174568..174570))
/locus_tag="Sbal_0153"
/note="Putative proton exit pathway; other site"
/db_xref="CDD:29934"
misc_feature complement(174553..174555)
/locus_tag="Sbal_0153"
/note="Subunit I/VIb interface; other site"
/db_xref="CDD:29934"
misc_feature complement(174454..174456)
/locus_tag="Sbal_0153"
/note="Subunit I/VIc interface [polypeptide binding];
other site"
/db_xref="CDD:29934"
misc_feature complement(order(174124..174129,174310..174312))
/locus_tag="Sbal_0153"
/note="Electron transfer pathway; other site"
/db_xref="CDD:29934"
misc_feature complement(order(174043..174045,174214..174216))
/locus_tag="Sbal_0153"
/note="Subunit I/VIIIb interface [polypeptide binding];
other site"
/db_xref="CDD:29934"
misc_feature complement(order(174094..174096,174106..174108))
/locus_tag="Sbal_0153"
/note="Subunit I/VIIb interface [polypeptide binding];
other site"
/db_xref="CDD:29934"
gene complement(175501..177057)
/locus_tag="Sbal_0154"
/db_xref="GeneID:4845346"
CDS complement(175501..177057)
/locus_tag="Sbal_0154"
/note="PFAM: cytochrome c oxidase, subunit II; cytochrome
c, class I; cytochrome C oxidase subunit II, transmembrane
region;
KEGG: shm:Shewmr7_3864 cytochrome c oxidase, subunit II"
/codon_start=1
/transl_table=11
/product="cytochrome c oxidase subunit II"
/protein_id="YP_001048557.1"
/db_xref="GI:126172408"
/db_xref="InterPro:IPR001505"
/db_xref="InterPro:IPR002429"
/db_xref="InterPro:IPR003088"
/db_xref="InterPro:IPR009056"
/db_xref="InterPro:IPR011759"
/db_xref="GeneID:4845346"
/translation="MKQLLYCLLVVLFAPPLAAADMRFNMTPGVTEISGKVYHLHMTI
LYICCAIGLVVFGVMIYAMINHRKSKGAVASHFHESTKVEIAWTILPFIILILMAIPA
TKTLIAMEDPSDADLTVKVTGSQWKWHYSYFDQDIDFYSILATPRAQIDGTETKGEHY
LLEVDKPLVLPINRKIRFLMTSEDVIHSWWVPAFAVKKDANPGFINEAWTRIDKPGIY
RGQCAELCGKDHGFMPIVVQAIPEAEFEAWVTEQKQAAGAAAEAAQAALSQTLSKDDL
MTQGEQVYLGHCAACHQPNGEGLQGVFPHLKGSPIATGPLSGHLEIVLNGKTGTAMQA
FSKQLSAQEIAAVITYERNAWGNNTGDAVQAKDVNEHMNGSAGTQAPATTPAKTAPTP
APTTKPAAVVDSATIVDPASLPTLTHEALMAEGETVYTTTCAACHQLTGAGIPPAFPA
LAGSAIATGPVANHLDIVMHGKTGTAMQAFGKQLSPQQLAAVITYERNAWGNNTGDTV
QPADIASHGQ"
misc_feature complement(176755..176988)
/locus_tag="Sbal_0154"
/note="Cytochrome C oxidase subunit II, transmembrane
domain; Region: COX2_TM; pfam02790"
/db_xref="CDD:202397"
misc_feature complement(176311..176961)
/locus_tag="Sbal_0154"
/note="cytochrome c oxidase subunit II; Provisional;
Region: COX2; MTH00038"
/db_xref="CDD:177113"
misc_feature complement(176338..176709)
/locus_tag="Sbal_0154"
/note="Cytochrome C oxidase subunit II, periplasmic
domain; Region: COX2; pfam00116"
/db_xref="CDD:201014"
misc_feature complement(175951..>176238)
/locus_tag="Sbal_0154"
/note="Cytochrome c, mono- and diheme variants [Energy
production and conversion]; Region: CccA; COG2010"
/db_xref="CDD:32193"
misc_feature complement(176008..176229)
/locus_tag="Sbal_0154"
/note="Cytochrome C oxidase, cbb3-type, subunit III;
Region: Cytochrome_CBB3; pfam13442"
/db_xref="CDD:205620"
misc_feature complement(175513..175854)
/locus_tag="Sbal_0154"
/note="Cytochrome c, mono- and diheme variants [Energy
production and conversion]; Region: CccA; COG2010"
/db_xref="CDD:32193"
misc_feature complement(175573..175800)
/locus_tag="Sbal_0154"
/note="Cytochrome C oxidase, cbb3-type, subunit III;
Region: Cytochrome_CBB3; pfam13442"
/db_xref="CDD:205620"
gene complement(177460..177972)
/locus_tag="Sbal_0155"
/db_xref="GeneID:4842118"
CDS complement(177460..177972)
/locus_tag="Sbal_0155"
/note="KEGG: shm:Shewmr7_3863 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048558.1"
/db_xref="GI:126172409"
/db_xref="GeneID:4842118"
/translation="MNKLLGNAPRHPGLWLDEVRDADYDWHHAPIACMPTKTQGRQEL
IHLSAQLAQLSQQGRWLVLINPPSIGYKQMLANAGVRMDRVLLVHAKDEVETLWAMEK
ALTSGTSSAVITWTQSLDARDNRRLQIVAKSARAMGIVLEDVNSHLHGDVRIEQGSLF
GQQSFFSAVH"
misc_feature complement(177523..>177798)
/locus_tag="Sbal_0155"
/note="Cell division inhibitor SulA; Region: SulA;
cl01880"
/db_xref="CDD:186485"
gene complement(177969..178589)
/locus_tag="Sbal_0156"
/db_xref="GeneID:4842750"
CDS complement(177969..178589)
/locus_tag="Sbal_0156"
/EC_number="3.4.21.88"
/note="Represses a number of genes involved in the
response to DNA damage"
/codon_start=1
/transl_table=11
/product="LexA repressor"
/protein_id="YP_001048559.1"
/db_xref="GI:126172410"
/db_xref="InterPro:IPR006197"
/db_xref="InterPro:IPR006198"
/db_xref="InterPro:IPR006199"
/db_xref="InterPro:IPR006200"
/db_xref="GeneID:4842750"
/translation="MRPLTPRQAEILELIKRNIADTGMPPTRAEIATRLGFKSANAAE
EHLKALAKKGCIEIMPGTSRGIRLTAEVEEVTETGLPLIGQVAAGEPILAQEHVEQYY
QVDPSMFHPAADFLLRVKGDSMKNIGILEGDLLAVHKVQQARNGQVVVARVDDDVTVK
RFEKKGNVVYLHAENEDYSPIKVDLGYQSLTIEGLAVGVIRNGDWL"
misc_feature complement(177981..178583)
/locus_tag="Sbal_0156"
/note="LexA repressor; Validated; Region: PRK00215"
/db_xref="CDD:178931"
misc_feature complement(178395..178583)
/locus_tag="Sbal_0156"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:214025"
misc_feature complement(178038..178247)
/locus_tag="Sbal_0156"
/note="Peptidase S24 LexA-like proteins are involved in
the SOS response leading to the repair of single-stranded
DNA within the bacterial cell. This family includes: the
lambda repressor CI/C2 family and related bacterial
prophage repressor proteins; LexA (EC...; Region:
S24_LexA-like; cd06529"
/db_xref="CDD:119397"
misc_feature complement(order(178110..178112,178221..178223))
/locus_tag="Sbal_0156"
/note="Catalytic site [active]"
/db_xref="CDD:119397"
gene 178750..181173
/locus_tag="Sbal_0157"
/db_xref="GeneID:4841666"
CDS 178750..181173
/locus_tag="Sbal_0157"
/EC_number="2.3.1.15"
/note="PlsB; catalyzes the formation of 1-acyl-sn-glycerol
3-phosphate by transfering the acyl moiety from acyl-CoA"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate acyltransferase"
/protein_id="YP_001048560.1"
/db_xref="GI:126172411"
/db_xref="InterPro:IPR002123"
/db_xref="GeneID:4841666"
/translation="MPKHDSLWLKSLRWIQKHLVHTIVVPQDPFADLNLDASRPLAYV
MKTESLSDIAALSEITAKLGLPSPYEPLVANGVIAPRVVCLQGRKPLFGERAGNEPFL
ECFMRLLAVHKERPELDIQLVPVSLYWGRTPGKEDDTMKAAVFERENPTWLRKCLMIL
FLGRHNFVQFSNAVSLRYMADEHGTDMGIAHKLARVARVHFRRQRKVMTGPVLPNRQA
LFHSLLKSESLRKAIQEEAANKKISETQARETAIEYLDEIAADYSDSLVRIAERFLTW
LWNKLYSGINIKGAEQVRQLHHDGHEIVYVPCHRSHMDYLLLSYILYYQGMVPPHIAA
GINLNFWPAGPMFRRGGAFFIRRSFNGNKLYTAVFREYLDQLFAKGYSVEYFSEGGRS
RTGRLLAPKTGMIAMTMNSVLRGIERPVTLVPVYLGYDHVMEVATYHKELSGKKKKKE
SVWQVFGAIRKLGNFGQGYVNFGEPITLQNFLNERAPNWRTELADDPEQKPSWLTPAV
NVLANRVMTNINDAAAASSVTLTSLVLLATDQNALERSLLERQLDLYLTLLKKVPYTT
YTSVAEGDGKHLVQQGLELNKFVVCADPLGEIVSIEASQAVSMTYYRNNIIHLFIVPS
LIASCLTHNKQIPRQQVVSIVADFYPLLKAELFMGIKDVPAYVNQVLDFFIEQGLVVE
TDTLTVVPEHTSQLLLLASSVSETLQRYAIIFNLLANRPKMERSELESESHLLAQRLG
ALHGITAPEFYDKKLYGTLSVKLKELGYLADNQDKSNINRIRDQANSLLRPSVKQTIV
ASVTAEHTV"
misc_feature 178783..181140
/locus_tag="Sbal_0157"
/note="glycerol-3-phosphate O-acyltransferase; Region:
plsB; TIGR03703"
/db_xref="CDD:163415"
misc_feature 179593..180198
/locus_tag="Sbal_0157"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: GPAT-like; Region:
LPLAT_DHAPAT-like; cd07993"
/db_xref="CDD:153255"
misc_feature order(179674..179676,179683..179685,179689..179691,
179752..179763,179914..179922)
/locus_tag="Sbal_0157"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153255"
gene 181173..182429
/locus_tag="Sbal_0158"
/db_xref="GeneID:4845268"
CDS 181173..182429
/locus_tag="Sbal_0158"
/note="TIGRFAM: aromatic amino acid transporter;
PFAM: aromatic amino acid permease;
KEGG: she:Shewmr4_3787 aromatic amino acid transporter"
/codon_start=1
/transl_table=11
/product="aromatic amino acid transporter"
/protein_id="YP_001048561.1"
/db_xref="GI:126172412"
/db_xref="InterPro:IPR002091"
/db_xref="InterPro:IPR013059"
/db_xref="GeneID:4845268"
/translation="MANHMNAAKHKPAGKSLLGGAMIIAGTTVGAGMFSLPVVGAGMW
FGYSILMLLGIWFCMLMSGLLLLETNLHFEPGASFDTLSKQTLGQFWRIVNGVSIAFV
LYILTYAYISGGGSIVNHSLQGMGIELPQSVAGLVFAIVLASIVLISTKAVDRITTIM
LGGMIITFFLAIGNLLIEIDVTKLLEPDGNSSFSPYLWAALPFGLASFGYHGNVPSLV
KYYGKDSATIIKAIFVGTFIALVIYACWLVATMGNIPRSQFIDIIAQGGNMGVLVGAL
SEVMASSWLNSMLTLFANLAVASSFLGVTLGLFDYLADLFGFDDSRSGRMKTALVTFV
PPTILGLLFPDGFLVAIGFAALAATVWAVIVPALMAYKSRQLFPDSTGFRVIGGTPLI
ILVVLFGIVTGACHLLAMANLLPQYS"
misc_feature 181218..182426
/locus_tag="Sbal_0158"
/note="Transmembrane amino acid transporter protein;
Region: Aa_trans; cl15776"
/db_xref="CDD:210176"
misc_feature 181227..182369
/locus_tag="Sbal_0158"
/note="aromatic amino acid transport protein; Region:
araaP; TIGR00837"
/db_xref="CDD:162061"
gene 182579..183352
/locus_tag="Sbal_0159"
/db_xref="GeneID:4843062"
CDS 182579..183352
/locus_tag="Sbal_0159"
/note="PFAM: Glyoxalase/bleomycin resistance
protein/dioxygenase;
KEGG: shm:Shewmr7_3859 glyoxalase/bleomycin resistance
protein/dioxygenase"
/codon_start=1
/transl_table=11
/product="glyoxalase/bleomycin resistance
protein/dioxygenase"
/protein_id="YP_001048562.1"
/db_xref="GI:126172413"
/db_xref="InterPro:IPR004360"
/db_xref="GeneID:4843062"
/translation="MKITQYAQGHACWVELANHDWQAAKTFYQALFGWDSVDMPIPEG
HFSLFNLAGDDLGAMYQIPESESQIPSHWRVYFAVDDMDASIAAIQAAGGQVHMGPHI
VADAGVMAQVSDPQGARFALWQAKNHIGARRQGELNTLCWVELACKEPRTEEAFYCKI
FPWTNSPSDMPDIEYSEWQVDGQSIGGMMTIMPEWGDISPHWLLYFAVADCDAFAEKA
QALGAQVCIPPSDIPDVGRFSVIADAQGATFAVIKLNQM"
misc_feature 182612..182950
/locus_tag="Sbal_0159"
/note="N-terminal domain of Streptomyces griseus SgaA
(suppression of growth disturbance caused by A-factor at a
high concentration under high osmolality during early
growth phase), and similar domains; Region: SgaA_N_like;
cd07247"
/db_xref="CDD:176671"
misc_feature 182996..183334
/locus_tag="Sbal_0159"
/note="N-terminal domain of Streptomyces griseus SgaA
(suppression of growth disturbance caused by A-factor at a
high concentration under high osmolality during early
growth phase), and similar domains; Region: SgaA_N_like;
cd07247"
/db_xref="CDD:176671"
misc_feature 183002..183331
/locus_tag="Sbal_0159"
/note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily; Region: Glyoxalase; pfam00903"
/db_xref="CDD:201499"
gene complement(183558..185519)
/locus_tag="Sbal_0160"
/db_xref="GeneID:4842481"
CDS complement(183558..185519)
/locus_tag="Sbal_0160"
/note="PFAM: histidine kinase, HAMP region domain protein;
chemotaxis sensory transducer;
KEGG: shn:Shewana3_3985 methyl-accepting chemotaxis
sensory transducer"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis sensory transducer"
/protein_id="YP_001048563.1"
/db_xref="GI:126172414"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR004089"
/db_xref="GeneID:4842481"
/translation="MFSINQLALTKKLAIVPVLLVAMLITLGLTSYFALTDIDNRMRL
VTEDLAPESAITSNLLQEIYRLRLAVKTYVKTGSAEAATDFSNQSSKAHEMIAKAKAH
ISFPERIKLINQIGEHQVEYVDIFNRKIIVNQQNRERLVSGTLDIKGPEVEKTLSQIM
QSSFNDGDVRGAFYAGKTLRELLLVRLYVVKFLVDNQPEQAKRFTDELNKTHLAIDEL
AASLENLEYQSQVKQANQLLKEYEQAAQSVVEAINNRNTAIVELDKIGIEMAEMTSDL
QDSTMKSLSDAGDKAAQEVSQKITFISIILIIAILMAALITFIVTQSLLSSIREVVTL
LNEIADGEADLTQRLPENGHDELTQLAKNFNRFVVRIQVLVSQVKNTTVQLVSASTQL
SSVTHSATKDMSSQQNETQQVASAITEMAASAIEVAASADTANKLSEEAREQSLSGRE
IVANATHSMKELAEKVEASANTIELLRNDSDKIGEVLDVIRAIAEQTNLLALNAAIEA
ARAGEQGRGFAVVADEVRSLASRTQESTKQIQQIIQTLQNRSSSAATMMGQSREATST
TVIQVTKVEAALSTITDMVMSISHSVSQMAHAAEQQSTVVEEINISINSVSESANRTL
GGVNQTASSANDLLKLGHQLDNLVSEFRV"
misc_feature complement(184404..184550)
/locus_tag="Sbal_0160"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(184407..184412,184419..184424,
184428..184433,184440..184445,184449..184454,
184506..184508,184512..184517,184524..184529,
184533..184538,184545..184550))
/locus_tag="Sbal_0160"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(183564..184349)
/locus_tag="Sbal_0160"
/note="Methyl-accepting chemotaxis-like domains
(chemotaxis sensory transducer); Region: MA; smart00283"
/db_xref="CDD:197627"
misc_feature complement(183708..184208)
/locus_tag="Sbal_0160"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature complement(order(183714..183719,183723..183728,
183735..183740,183744..183749,183756..183758,
183765..183770,183777..183779,183786..183791,
183798..183803,183807..183812,183819..183821,
183828..183833,183840..183842,183849..183854,
183891..183896,183903..183908,183912..183917,
183924..183929,183936..183938,183945..183950,
183957..183959,183966..183968,183978..183980,
183999..184001,184008..184010,184020..184022,
184029..184034,184041..184043,184050..184052,
184059..184064,184071..184076,184083..184085,
184092..184097,184101..184103,184113..184118,
184122..184127,184134..184136,184143..184148,
184155..184160,184167..184169,184176..184181,
184188..184190,184197..184202,184206..184208))
/locus_tag="Sbal_0160"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature complement(183933..184034)
/locus_tag="Sbal_0160"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene complement(185873..187042)
/locus_tag="Sbal_0161"
/db_xref="GeneID:4842424"
CDS complement(185873..187042)
/locus_tag="Sbal_0161"
/note="PFAM: ribonuclease T2;
KEGG: son:SO4599 ribonuclease, T2 family"
/codon_start=1
/transl_table=11
/product="ribonuclease T2"
/protein_id="YP_001048564.1"
/db_xref="GI:126172415"
/db_xref="InterPro:IPR001568"
/db_xref="GeneID:4842424"
/translation="MTKPFCLTIRRIWPQALSLKSLSRTLLAAFGLCAALIISAAPAF
AAPATGEFVADKRCELFQSKNKQTNPDQWQSNIGERYPVLEILGNSAKPDWLRVRTNA
VKSPMRWISGACGQYLSNVAGSNVSTPATAVEPAQTTTASDIKAKSRDGLKEHGTPEK
RPGDQCRIGGEFDANVLALSWQSTFCELYGRRKAECRALSQTPESSQWQHFSLHGLWP
NKQQCGTRYGYCSTVKLQPNDFCTYPELELNPSVRKNLEEVMPSAQYGTCLERHEWWK
HGTCRSQDPNEYFLLATQLTQAVNASAWVQKFIHDNIGKSVSKSELNQSFDSSFGQGA
HAKMSLECGKGLLSEIRINLPEVIKASDSLPSLLAKANKAGRGSCPETIMIDNAN"
misc_feature complement(185903..186529)
/locus_tag="Sbal_0161"
/note="Ribonuclease T2 (RNase T2) is a widespread family
of secreted RNases found in every organism examined thus
far. This family includes RNase Rh, RNase MC1, RNase LE,
and self-incompatibility RNases (S-RNases). Plant T2
RNases are expressed during leaf...; Region:
RNase_T2_prok; cd01062"
/db_xref="CDD:29474"
misc_feature complement(order(185990..185992,186392..186394,
186515..186517))
/locus_tag="Sbal_0161"
/note="B1 nucleotide binding pocket [chemical binding];
other site"
/db_xref="CDD:29474"
misc_feature complement(order(185996..185998,186236..186238,
186488..186490,186503..186505))
/locus_tag="Sbal_0161"
/note="B2 nucleotide binding pocket [chemical binding];
other site"
/db_xref="CDD:29474"
misc_feature complement(order(186203..186238,186389..186412))
/locus_tag="Sbal_0161"
/note="CAS motifs; other site"
/db_xref="CDD:29474"
misc_feature complement(order(186212..186217,186224..186229,
186386..186388,186392..186394,186401..186403))
/locus_tag="Sbal_0161"
/note="active site"
/db_xref="CDD:29474"
gene complement(187251..190400)
/locus_tag="Sbal_0162"
/db_xref="GeneID:4844475"
CDS complement(187251..190400)
/locus_tag="Sbal_0162"
/note="TIGRFAM: heavy metal efflux pump, CzcA family;
PFAM: acriflavin resistance protein;
KEGG: son:SOA0153 heavy metal efflux pump, CzcA family"
/codon_start=1
/transl_table=11
/product="CzcA family heavy metal efflux protein"
/protein_id="YP_001048565.1"
/db_xref="GI:126172416"
/db_xref="InterPro:IPR001036"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR004763"
/db_xref="GeneID:4844475"
/translation="MLKYIIEASIRQRFMVLIIAIMITVWGVQELRKTPLDALPDLSD
VQVIIKTPYPGQAPKLVEEQVTYPLSTAMLAVPGAKTVRGYSMFGDSYVYVIFEDGTD
IYWARSRVLEYLSQISSRLPQNVQPSLGPDASGVGWVYEYALVDRSGNLDLSQLKSLQ
DWYLKLELQSVAGVSEVATVGGMEQTYQIVLEPDKMAIYKLDIATIKQAIDKANSEAG
GSVIEMAEAEYMVRAKGYRQTLEDFREIPLGITSPSGTGLTLKDVATVRKGPASRRGI
AELDGEGEVVGGIVVMRYGENALATIDAVKAKLEELKAGLPDGVEIIPTYDRSHLILK
SVDNLFSKVVEEMLVVGLVCLLFLLHARSTLVAVITLPLSILIAFIVMNKMGVNANIM
SLGGIAIAIGAVVDCAIVMIENLHKHLEHFKADHDREPDTKEHWRIVTEASIEVGPAL
FFSLIIITLSFVPVFALEAQEGRLFAPLAYTKTFAMAAAAFLSITLVPILMGYFIRGK
IPSERSNPISRFLIAIYQPSLKLVLKFPKVTLMLALIALASAWYPMTRMGSEFMPALE
EGDLLYMPTALPGISASKAAEVLQQTDRLIKTVPEVARVFGKVGRAETATDPAPLTML
ETTIMLKPHDEWREGMTLDGIIAQLQQTVKVPGLTNAWVQPIKTRIDMLSTGIKTPVG
IKITGADVNELQSIGTKIEAILSKVPHTKSAYAERSGGGRYIDISPKLDVAARYGMTL
QDIQDVVRYAIGGMDIGESVQGAERYPINLRYPRELRDNIEKLRELPVITKSGHYLPL
RNLADIEINDGAPMLKSENGRLISWVFIDIEGTSIGEYIATAKTALDAELVVPPRYSY
SFAGQYEYMQRVDAKLKQVIPMALAVIFILLMMTFGSTIQASIIMLSLPFALVGSTWL
LYLLDYNISVAVAVGMIALAGVAAEFGVVMLVYLNNAIKHRQEKDNYHSVNDLKEALI
EGAVMRIRPKAMTVATIFFGLLPIMWGAGSGNDVMQKIAAPMVGGMVTAPILSLFVLP
ALYLLIYSRKLKKDPAHVS"
misc_feature complement(187266..190400)
/locus_tag="Sbal_0162"
/note="Putative silver efflux pump [Inorganic ion
transport and metabolism]; Region: COG3696"
/db_xref="CDD:33492"
gene complement(190410..191951)
/locus_tag="Sbal_0163"
/db_xref="GeneID:4841987"
CDS complement(190410..191951)
/locus_tag="Sbal_0163"
/note="TIGRFAM: efflux transporter, RND family, MFP
subunit;
KEGG: son:SOA0154 heavy metal efflux protein, putative"
/codon_start=1
/transl_table=11
/product="RND family efflux transporter MFP subunit"
/protein_id="YP_001048566.1"
/db_xref="GI:126172417"
/db_xref="InterPro:IPR006143"
/db_xref="GeneID:4841987"
/translation="MNQFNTVKKQAPKAVLILSSLLISTPWLSHAQLANTQEPTATEA
AANSATAPKHNPLNQVKTYTCPMHPEVISHEPGRCPKCNMFLVEKLDAANPAAEHAQH
QAADHQASEHGQTSADKATSQVFDTPTPKADSLVKAQNHVTTIKYVCPMHAHIISDVP
GTCPICGMNLEKVETGGNTQEININVSGSMQQALALKVAKVERDTLWKFVETVGQIDY
DESQITHIHARVTGWIEKLMIKSVGDTVKKDQLIYEIYSPDLINAQDDYLLAMDTAKA
NGQGRYKDLVRNAGLRLSFLGFNDRQIKQLAESHQTQYRVPFYAKEDGIVKALDIRDG
MYIQPSTEVMSVVDLSKVWVIADVFENEQSWIAKGQKAEIAVPAMNISGIEGTIDYIY
PELDPVTRSLRVRVVLNNTEVDLRPKTLAKVSLFGGPNKDVLVIPQEALIQTGKENRV
IVKQTDDSFTAKAVTVGMMSQGKAEIISGLNEGERVVISGQFLLDSEASLKGSLMRLS
SGHQH"
misc_feature complement(190470..191363)
/locus_tag="Sbal_0163"
/note="RND family efflux transporter, MFP subunit; Region:
RND_mfp; TIGR01730"
/db_xref="CDD:162505"
misc_feature complement(190701..190997)
/locus_tag="Sbal_0163"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene complement(191973..192233)
/locus_tag="Sbal_0164"
/db_xref="GeneID:4844066"
CDS complement(191973..192233)
/locus_tag="Sbal_0164"
/note="KEGG: son:SOA0155 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048567.1"
/db_xref="GI:126172418"
/db_xref="GeneID:4844066"
/translation="MKTLTNLALIAFLLTSTSVFATAAPHEHQHDNANPQQQAQTYVC
PMHPEVTGNKGDTCPKCGMDLEPKATEVKTAEGTMHNAHEHH"
gene complement(192501..192974)
/locus_tag="Sbal_0165"
/db_xref="GeneID:4844095"
CDS complement(192501..192974)
/locus_tag="Sbal_0165"
/note="KEGG: son:SOA0156 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048568.1"
/db_xref="GI:126172419"
/db_xref="GeneID:4844095"
/translation="MLDSSRSSFGILMHHTLGRYFLVMFTLLALVGQSVVSNGHAMVP
HTMDMSAMNHEASPQMHHAAMMQMNTENPSDSHSMANADCCNDKMLPGAKQHCCDGTT
SCSNDCGHCLTISVAGTLFSPHLWPSVSMSDTAMATPMPHFHSISLSSAFKPPIA"
gene complement(193048..193503)
/locus_tag="Sbal_0166"
/db_xref="GeneID:4841730"
CDS complement(193048..193503)
/locus_tag="Sbal_0166"
/note="KEGG: son:SOA0157 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048569.1"
/db_xref="GI:126172420"
/db_xref="GeneID:4841730"
/translation="MKTSLLNKSLLGLTFVIGALLSSTTVTAASLKSTDSLSVISING
VPATPFKPIQLSAGKVLLELKYQDIFDYRADDSGNWVKSAPLYLVLDVKASDSYQITQ
PKIMTEAEARQFIKYPTIQLSINGDKAGEYPLQSHSQLMAKMLVSNPAF"
misc_feature complement(<193138..193419)
/locus_tag="Sbal_0166"
/note="Uncharacterized protein conserved in bacteria
(DUF2057); Region: DUF2057; cl11437"
/db_xref="CDD:209321"
gene complement(193604..193909)
/locus_tag="Sbal_0167"
/db_xref="GeneID:4845675"
CDS complement(193604..193909)
/locus_tag="Sbal_0167"
/note="KEGG: son:SOA0158 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048570.1"
/db_xref="GI:126172421"
/db_xref="GeneID:4845675"
/translation="MVSAMPTSANTNGHSSQTMLMMDAEMNCTMPDCSASDCLQHCQD
SMTSHCQTHCLSSLYLEPAVLELAFANPASKRIAIQGWAMQTADLGLTTPPPTSNSL"
gene 194401..194964
/locus_tag="Sbal_0168"
/db_xref="GeneID:4844472"
CDS 194401..194964
/locus_tag="Sbal_0168"
/note="PFAM: NapC/NirT cytochrome c domain protein;
KEGG: saz:Sama_3471 tetraheme cytochrome c"
/codon_start=1
/transl_table=11
/product="NapC/NirT cytochrome c domain-containing
protein"
/protein_id="YP_001048571.1"
/db_xref="GI:126172422"
/db_xref="InterPro:IPR005126"
/db_xref="InterPro:IPR011031"
/db_xref="GeneID:4844472"
/translation="MNWRALFKPSAKYSILALLVVGIVIGVVGYFATQTTLHATSQDA
FCMSCHSQHSLKDEVMASAHGNNRVGIVVQCQQCHIAQEPFQYLKKKIIVSKDVIGFL
TIDGFNTQAWLDENRKEQAELARDYLRAIDSSTCQNCHNRIYENQSENMSKMAVRMHS
NNFKKAPEDRKTCIDCHKGVAHPYPKG"
misc_feature 194422..194961
/locus_tag="Sbal_0168"
/note="NapC/NirT cytochrome c family, N-terminal region;
Region: Cytochrom_NNT; pfam03264"
/db_xref="CDD:190582"
gene complement(195061..195345)
/locus_tag="Sbal_0169"
/db_xref="GeneID:4845605"
CDS complement(195061..195345)
/locus_tag="Sbal_0169"
/note="PFAM: protein of unknown function DUF1145;
KEGG: shn:Shewana3_3974 protein of unknown function
DUF1145"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048572.1"
/db_xref="GI:126172423"
/db_xref="InterPro:IPR009525"
/db_xref="GeneID:4845605"
/translation="MKAMPLLINLGKAITLIAWLMMAYNLVMPFEGNVAIILNILFGI
TCMMHCFQVAIFHMLFKTLLLLTKLDYLQVFIFGIFSLLAYRQKVMTPAS"
misc_feature complement(195172..195330)
/locus_tag="Sbal_0169"
/note="Protein of unknown function (DUF1145); Region:
DUF1145; pfam06611"
/db_xref="CDD:203484"
gene complement(195320..195988)
/locus_tag="Sbal_0170"
/db_xref="GeneID:4842914"
CDS complement(195320..195988)
/locus_tag="Sbal_0170"
/note="TIGRFAM: putative methyltransferase;
PFAM: conserved hypothetical protein 95;
KEGG: she:Shewmr4_3775 putative methyltransferase"
/codon_start=1
/transl_table=11
/product="putative methyltransferase"
/protein_id="YP_001048573.1"
/db_xref="GI:126172424"
/db_xref="InterPro:IPR002052"
/db_xref="InterPro:IPR004398"
/db_xref="GeneID:4842914"
/translation="MVKNRTVKNNVTKSPTAKNKPGSGQVRIIAGQWRSRRLPIQDLE
GLRPTTDRVRETLFNWLANDLVNARVLDCFGGSGALALEALSRYASFAKIIELQRGAA
MQLKENLQTLKCDKAEVLNADTLVVLQRGCEQGFDVVFIDPPFRKGLAEKTIQLLDTQ
AWLNDGALIYVEIESELTQLAIPPCWHALKEKNAGQVSYRLYQYQAENTAEPIEDESH
ALAD"
misc_feature complement(<195554..195784)
/locus_tag="Sbal_0170"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(195563..195565,195617..195625,
195698..195703,195752..195772))
/locus_tag="Sbal_0170"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 196202..198067
/locus_tag="Sbal_0171"
/db_xref="GeneID:4844687"
CDS 196202..198067
/locus_tag="Sbal_0171"
/note="KEGG: shm:Shewmr7_3847 signal recognition
particle-docking protein FtsY;
TIGRFAM: signal recognition particle-docking protein FtsY;
PFAM: GTP-binding signal recognition particle SRP54, G-
domain; GTP-binding signal recognition particle SRP54,
helical bundle;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="signal recognition particle-docking protein
FtsY"
/protein_id="YP_001048574.1"
/db_xref="GI:126172425"
/db_xref="InterPro:IPR000897"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR004390"
/db_xref="InterPro:IPR013822"
/db_xref="GeneID:4844687"
/translation="MAKKGFFSWFRKDKSQDEVVAETPVVTPTQDTEAAERLEQERAE
AQRLAVEAEAQAAAAKLAAEQLAAEQAQAERIVQEQAAIEAQRLAEQQAEAARLAAAQ
LEAEQLAKVQAERIAQEQAQIEAQRLAEQQAETARLAAAQLEAEQLAVDKLAAEQAAA
EQLAQAQAKAEAERIAQEQAQIEAQRLAEQQAEAARLAAAQLESERLAANNLAQAQAK
AEAERIDHEQAQIEAQRLAEQQAEAARLAAAQLEAERARVAAEQAAEALAAEQLAAEA
LAREQAEALAQQQAEATQTAGPVTELQPEPQARPVKEGLFARLKRGLMRTSENIGSGF
IGLFRGKKIDDDLFEELEEQLLIADVGVETTTRLIKNLTEQASRKQLKDAEALYDLLR
EEMQKTLDPVAIPLVPDNANGPFVILMVGVNGVGKTTTIGKLAKQYQSQGKSVMLAAG
DTFRAAAVEQLQVWGQRNDITVIAQHTGADSASVLFDALQAAKARKVDVLIADTAGRL
QNKAHLMEELKKVVRVMKKLDPDTPHEVMLTLDASTGQNAISQAQLFQEAVGVTGITI
SKLDGTAKGGVVFAIADKFNIPIRYIGVGEQIDDLRTFNSKEFIDALFTQEKADS"
misc_feature 197135..198055
/locus_tag="Sbal_0171"
/note="signal recognition particle-docking protein FtsY;
Provisional; Region: PRK10416"
/db_xref="CDD:182441"
misc_feature 197156..197386
/locus_tag="Sbal_0171"
/note="SRP54-type protein, helical bundle domain; Region:
SRP54_N; pfam02881"
/db_xref="CDD:202445"
misc_feature 197444..197980
/locus_tag="Sbal_0171"
/note="The signal recognition particle (SRP) mediates the
transport to or across the plasma membrane in bacteria and
the endoplasmic reticulum in eukaryotes. SRP recognizes
N-terminal sighnal sequences of newly synthesized
polypeptides at the ribosome. The...; Region: SRP;
cd03115"
/db_xref="CDD:48379"
misc_feature 197462..197485
/locus_tag="Sbal_0171"
/note="P loop; other site"
/db_xref="CDD:48379"
misc_feature order(197552..197554,197717..197719,197900..197902,
197909..197914)
/locus_tag="Sbal_0171"
/note="GTP binding site [chemical binding]; other site"
/db_xref="CDD:48379"
gene 198071..198784
/locus_tag="Sbal_0172"
/db_xref="GeneID:4842828"
CDS 198071..198784
/locus_tag="Sbal_0172"
/note="KEGG: shn:Shewana3_3971 cell division ATP-binding
protein FtsE;
TIGRFAM: cell division ATP-binding protein FtsE;
PFAM: ABC transporter related;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="cell division ATP-binding protein FtsE"
/protein_id="YP_001048575.1"
/db_xref="GI:126172426"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005286"
/db_xref="GeneID:4842828"
/translation="MIDFQQVSKIYPGGQMALEDVNFHLQQGEMAFLTGHSGAGKSTL
LKLITVIERATTGRVAINGHDIAKVSPKHVPYLRRNIGMIFQNHHLLMDRSVFDNVAL
PLVIEGFSHGEIRKRVAGALDMVGLYGKERHNPIMLSGGEQQRVGIARAIVNKPPLLL
ADEPTGNLDPKLSMDILRLFETFNDAGTSVLIATHDLGLIARMKYRTFTLKQGRMLGA
QELHPSVHTRAPTNRGEGQ"
misc_feature 198071..198727
/locus_tag="Sbal_0172"
/note="cell division protein FtsE; Provisional; Region:
PRK10908"
/db_xref="CDD:182829"
misc_feature 198074..198715
/locus_tag="Sbal_0172"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
misc_feature 198173..198196
/locus_tag="Sbal_0172"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature order(198182..198187,198191..198199,198326..198328,
198554..198559,198653..198655)
/locus_tag="Sbal_0172"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature 198317..198328
/locus_tag="Sbal_0172"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature 198482..198511
/locus_tag="Sbal_0172"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature 198542..198559
/locus_tag="Sbal_0172"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature 198566..198577
/locus_tag="Sbal_0172"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature 198641..198661
/locus_tag="Sbal_0172"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene 198781..199746
/locus_tag="Sbal_0173"
/db_xref="GeneID:4844089"
CDS 198781..199746
/locus_tag="Sbal_0173"
/note="PFAM: protein of unknown function DUF214;
KEGG: son:SO4584 cell division ABC transporter, permease
protein FtsX"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048576.1"
/db_xref="GI:126172427"
/db_xref="InterPro:IPR003838"
/db_xref="GeneID:4844089"
/translation="MSDSAKLTRSKLPLSGRIVMFFIRHVQQAMASMGELWRNPVSSV
MTMAVLGVSLSLPAALQVLVKNAETITSSWNSAAEISLFIEDNRSEQTIQSLLTRIRT
YSEVDKVQYIDKNQALEEFQRLSGFGEALAYLDKNPLPAVITVTPTPRYSTPVGAREL
LTKLEREPEISFGRLDIEWLERLQAVVRLLERTVMAIAALLVLAVVLVIGNTIRLAIM
NRRSEIEVMKLVGATEAFIQRPFLYTGIWYGVIGGILAWLIINLLVWYLDSALAELLG
LYGSQLEMKSLTFTELLQLVGLASFLGWLGSYLSVRQHLRSIEPS"
misc_feature 198844..199740
/locus_tag="Sbal_0173"
/note="putative protein insertion permease FtsX; Region:
ftsX; TIGR00439"
/db_xref="CDD:129531"
misc_feature 198868..199743
/locus_tag="Sbal_0173"
/note="FtsX-like permease family; Region: FtsX; cl15850"
/db_xref="CDD:210250"
gene 199971..200828
/locus_tag="Sbal_0174"
/db_xref="GeneID:4845569"
CDS 199971..200828
/locus_tag="Sbal_0174"
/note="binds with the catalytic core of RNA polymerase to
produce the holoenzyme; this sigma factor is responsible
for the expression of heat shock promoters"
/codon_start=1
/transl_table=11
/product="RNA polymerase factor sigma-32"
/protein_id="YP_001048577.1"
/db_xref="GI:126172428"
/db_xref="InterPro:IPR000943"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR012759"
/db_xref="GeneID:4845569"
/translation="MTFQTQSMALTVPQGASSLEAYIHSVTSISMLDAEAEYELAKRL
QETGDLQAAKQLIMSHLRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGV
RLVSFAVHWIKAEIHEYVLKNWRIVKVATTKAQRKLFFNIRKAKKRLGWFSDAEVTMV
AENLGVSKADVTEMESRMAAQDPAFDLTNDQDEEHDFAPVHYLEDHSSDLAENIENDN
WESNAQGRLLSAIKTLDERSQHILRARWLDDDKTTLQELAETYQVSAERIRQLEKNAM
NKLKACMEA"
misc_feature 199983..200825
/locus_tag="Sbal_0174"
/note="RNA polymerase factor sigma-32; Reviewed; Region:
PRK06596"
/db_xref="CDD:180635"
misc_feature 200016..200129
/locus_tag="Sbal_0174"
/note="Sigma-70 factor, region 1.2; Region: Sigma70_r1_2;
pfam00140"
/db_xref="CDD:201030"
misc_feature 200136..200348
/locus_tag="Sbal_0174"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature 200646..200810
/locus_tag="Sbal_0174"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(200673..200675,200703..200705,200727..200732,
200760..200762,200766..200771,200775..200783,
200787..200792,200796..200798)
/locus_tag="Sbal_0174"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene complement(200930..202342)
/locus_tag="Sbal_0175"
/db_xref="GeneID:4843645"
CDS complement(200930..202342)
/locus_tag="Sbal_0175"
/note="TIGRFAM: O-succinylbenzoate-CoA ligase;
PFAM: AMP-dependent synthetase and ligase;
KEGG: son:SO4576 O-succinylbenzoic acid--CoA ligase"
/codon_start=1
/transl_table=11
/product="o-succinylbenzoate--CoA ligase"
/protein_id="YP_001048578.1"
/db_xref="GI:126172429"
/db_xref="InterPro:IPR000873"
/db_xref="InterPro:IPR010192"
/db_xref="GeneID:4843645"
/translation="MSDKRLSKSLTLSPVHQAALAFPQQTAIKLAGQDIRYSELSQRV
IALGQQLRAAGIAEGEPLACISLNNLEMICLYWACIDIGAIFFPISPRFPLAQIQGLI
DEHQIRYVWRAEISDLQNCSQLALDFNRLSNELAQPVDITRPANVILTSGSSGFPKAA
VHCLANHIANAEGARSLIPLEQGDAWLLSLPLFHIGGLAILNRCALVGATVVMPDQAL
SLSQQIDQDKLTHLSLVPAQLSKLLADTSSKLQSIKALLLGGGAVSLDLLAELKQRNI
ASYTSYGMTEMGSQITTGPALSDGSSGKLLPKRELKIEDSVIWVRGECLFMGYLAPEG
IQAGVDQEGWFYTKDRGEWDENGNLHILGRVDNMFICGGENIQPEEIEAALKQHPQID
DAIVFAIPNAQFGNLPAAILRGSLTHHTESIANELELFLADKIARFKRPRQYYVWPEN
HEQAGLKVNRKALIANLVKH"
misc_feature complement(200954..202318)
/locus_tag="Sbal_0175"
/note="O-succinylbenzoic acid--CoA ligase; Provisional;
Region: PRK09029"
/db_xref="CDD:181616"
misc_feature complement(201155..202234)
/locus_tag="Sbal_0175"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
gene complement(202343..203443)
/locus_tag="Sbal_0176"
/db_xref="GeneID:4842426"
CDS complement(202343..203443)
/locus_tag="Sbal_0176"
/note="catalyzes the dehydration of
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid
to form O-succinylbenzoate"
/codon_start=1
/transl_table=11
/product="O-succinylbenzoate synthase"
/protein_id="YP_001048579.1"
/db_xref="GI:126172430"
/db_xref="InterPro:IPR001354"
/db_xref="GeneID:4842426"
/translation="MILTSLNLYQYRLPLDVLLPVGKQRIDHRAGLVLQACASANVGD
EYKQVEVEIAPLSGIDVDEQVFVGFSRETLAQVQTALTELLPQLGGQHIDTLLDYAEQ
SPYPSLAFGLSLLHAKLMGKLDAIRPQTATVPLIYHPSDAGKDLHDNKIAALGMHVHS
VKVKVAQTSIEDELSLIYGILRTRPDLKLRLDANRGFTLEQAIEFAACLPLDTIEYIE
EPCQNPQDNLEFYQAIGMPYALDESLNDPDYQFAMQNGLTALVIKPMLLGSIEKLANL
IDTAQSYGVRCIISSSLESSLGISDLAHLAAILTPDEIPGLDTLSAFNQDLIVSSGKK
HFLSLAQLEPVAQHAIDSTQQSDLGAAKREEN"
misc_feature complement(202406..203437)
/locus_tag="Sbal_0176"
/note="O-succinylbenzoate synthase; Provisional; Region:
PRK05105"
/db_xref="CDD:179938"
misc_feature complement(202487..203428)
/locus_tag="Sbal_0176"
/note="o-Succinylbenzoate synthase (OSBS) catalyzes the
conversion of
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
(SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate
(o-succinylbenzoate or OSB), a reaction in the menaquinone
biosynthetic pathway; Region: OSBS; cd03320"
/db_xref="CDD:73346"
misc_feature complement(order(202496..202498,202571..202576,
202655..202657,202721..202723,202790..202792,
202862..202864,202868..202870,202958..202960))
/locus_tag="Sbal_0176"
/note="active site"
/db_xref="CDD:73346"
gene complement(203471..204265)
/locus_tag="Sbal_0177"
/db_xref="GeneID:4844477"
CDS complement(203471..204265)
/locus_tag="Sbal_0177"
/note="PFAM: alpha/beta hydrolase fold;
KEGG: shn:Shewana3_3966 alpha/beta hydrolase fold"
/codon_start=1
/transl_table=11
/product="Fis family transcriptional regulator"
/protein_id="YP_001048580.1"
/db_xref="GI:126172431"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR002197"
/db_xref="InterPro:IPR003089"
/db_xref="GeneID:4844477"
/translation="MPNMARYGDPSLPTLVLLHGFLGTKADWLPLMPALSQHFYCICL
DLPGHGDNQAEGSTEARLDFDFCVESIMARLDSLNPSPDKFHLYGYSLGGRIALHLAK
AYPQRLLSLNLESCHPGLADPQEKTARTKNDTQWAERLLHLASKDFLNLWYQQPVFAD
MTAAKRKALIEQRSAILDQHPKQLLKEVFLATSLARQASMWDVPSQLACECHFFAGSQ
DTKFHALAQEWQLHAPILVHNISGAGHNIHQAAPEALITKIVKLLG"
misc_feature complement(<203942..204241)
/locus_tag="Sbal_0177"
/note="Lipase. Lipases are esterases that can hydrolyze
long-chain acyl-triglycerides into di- and monoglycerides,
glycerol, and free fatty acids at a water/lipid interface.
A typical feature of lipases is 'interfacial activation',
the process of becoming...; Region: Lipase; cl14883"
/db_xref="CDD:209921"
misc_feature complement(203477..204235)
/locus_tag="Sbal_0177"
/note="2-succinyl-6-hydroxy-2,
4-cyclohexadiene-1-carboxylate synthase; Region:
menH_SHCHC; TIGR03695"
/db_xref="CDD:211863"
misc_feature complement(203987..204001)
/locus_tag="Sbal_0177"
/note="nucleophilic elbow; other site"
/db_xref="CDD:29806"
misc_feature complement(203993..203995)
/locus_tag="Sbal_0177"
/note="catalytic triad; other site"
/db_xref="CDD:29806"
gene complement(204265..205986)
/locus_tag="Sbal_0178"
/db_xref="GeneID:4843720"
CDS complement(204265..205986)
/locus_tag="Sbal_0178"
/EC_number="4.1.1.71"
/note="SEPHCHC synthase; forms
5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-
carboxylate from 2-oxoglutarate and isochorismate in
menaquinone biosynthesis"
/codon_start=1
/transl_table=11
/product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
cyclohexene-1-carboxylate synthase"
/protein_id="YP_001048581.1"
/db_xref="GI:126172432"
/db_xref="InterPro:IPR004433"
/db_xref="InterPro:IPR012001"
/db_xref="GeneID:4843720"
/translation="MRTENTATLNLIWGALILEELARLGVQHVCMAPGSRSTPLTLAA
AQQTKLQRHLHFDERGLGFMALGLAKASRAPVAIITTSGTAVANLYPAIVEAWLTHVP
LIVLSGDRPPELLGCGANQAIVQPGIFANYATQVNLPTPDAHIAPQALLTTVDEAVAN
QTRPVHINCMYREPLYPSELSGVILDAESPYLKPLQTWLQLARPYTQYGKSKQLSSPS
DDAIMRFVHGKGVIVVGTLTPEQDPQQLIALSQKIGWPLLTDAQSQLRQHPAAIGNID
QLLQHPKARNLLQEADRVLVFGGRLLSKRVIGYLAEQNWHSYWQVLPEQDRLDPSHNA
KHIWHANAEQFAALNWYRSSSANWANTLITYNDELHNLFVRNIDQGEFGEAQVIRAIA
NTRPLEQQLFIGNSLPVRLYDMYAPVSCCTATTYTNRGASGIDGLLATACGIAAHEGK
PTSLIIGDLSQLHDLNSLAIAKGLSSPLVIVILNNDGGNIFNLLPVPNEQVRSEYYRL
SHGLEFGYAAAMFNLPYNQVDNLADFQDSYNEALDFQGASIIEVNVSQNQASDQIAAL
NLWVKQS"
misc_feature complement(204268..205980)
/locus_tag="Sbal_0178"
/note="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
carboxylate synthase; Validated; Region: PRK07449"
/db_xref="CDD:180980"
misc_feature complement(205474..205944)
/locus_tag="Sbal_0178"
/note="Pyrimidine (PYR) binding domain of
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-
carboxylate synthase (MenD) and related proteins; Region:
TPP_PYR_MenD; cd07037"
/db_xref="CDD:132920"
misc_feature complement(order(205591..205596,205603..205605,
205615..205617,205624..205629,205648..205650,
205705..205707,205714..205719,205723..205728,
205735..205737,205810..205827,205831..205833,
205873..205875,205885..205890,205894..205896))
/locus_tag="Sbal_0178"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132920"
misc_feature complement(order(205591..205596,205603..205605,
205615..205617,205624..205629,205648..205650,
205705..205707,205714..205719,205723..205728,
205735..205737,205810..205827,205831..205833,
205873..205875,205885..205890,205894..205896))
/locus_tag="Sbal_0178"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:132920"
misc_feature complement(order(205624..205629,205693..205695,
205702..205704,205714..205716,205723..205725,
205735..205737,205774..205779,205783..205791,
205795..205800,205807..205833,205873..205875,
205885..205890,205894..205896))
/locus_tag="Sbal_0178"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132920"
misc_feature complement(205813..205815)
/locus_tag="Sbal_0178"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132920"
misc_feature complement(<205051..205302)
/locus_tag="Sbal_0178"
/note="Thiamine pyrophosphate enzyme, central domain;
Region: TPP_enzyme_M; cl00815"
/db_xref="CDD:207207"
misc_feature complement(204322..204843)
/locus_tag="Sbal_0178"
/note="Thiamine pyrophosphate (TPP) family, SHCHC synthase
subfamily, TPP-binding module; composed of proteins
similar to Escherichia coli
2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid
(SHCHC) synthase (also called MenD). SHCHC synthase plays
a key...; Region: TPP_SHCHC_synthase; cd02009"
/db_xref="CDD:48172"
misc_feature complement(order(204526..204528,204532..204534,
204607..204618,204685..204687))
/locus_tag="Sbal_0178"
/note="TPP-binding site; other site"
/db_xref="CDD:48172"
gene complement(206168..207136)
/locus_tag="Sbal_0179"
/db_xref="GeneID:4841665"
CDS complement(206168..207136)
/locus_tag="Sbal_0179"
/note="PFAM: regulatory protein, LysR;
KEGG: shn:Shewana3_3964 transcriptional regulator, LysR
family"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_001048582.1"
/db_xref="GI:126172433"
/db_xref="InterPro:IPR000847"
/db_xref="GeneID:4841665"
/translation="MHISNMDGLDILSLKILVSLYENKSATYVSKALDIPAPKISRSL
KNLREIFGDELFIRRKYGLFPNEFATHLYPIAKEAIECTDKFHKARAANANLVKTHIE
IAAPGLIAYAFPKALMQAIKDEQKLMHINITPWSMHTTQDIINGDTTLGICCNKSTAD
VAAFGDKLLTTTLQSMDKVYLLASRNHPIFKREITLETIAEYPYVNTDLGNPSSKLSP
YQEFCLKSNIKLNTEITITSISSLFEYLGESQALSLLPYRVVYEMVSDVAELHTCQLS
QLEAERLYAHAEAPTIFLVQKNQPNKVNDDLVWLSGQIKKIVDHII"
misc_feature complement(206345..207112)
/locus_tag="Sbal_0179"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(206930..207097)
/locus_tag="Sbal_0179"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(206312..206830)
/locus_tag="Sbal_0179"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature complement(order(206393..206398,206402..206407,
206423..206440,206735..206755,206759..206761,
206771..206773,206780..206785,206789..206794))
/locus_tag="Sbal_0179"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 207546..208022
/locus_tag="Sbal_0180"
/db_xref="GeneID:4845674"
CDS 207546..208022
/locus_tag="Sbal_0180"
/note="KEGG: shn:Shewana3_3963 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048583.1"
/db_xref="GI:126172434"
/db_xref="GeneID:4845674"
/translation="MNTSVILSYAFMYFVLFVAVPFVFVMFVMTCIKFFKAGPDEAEH
HEMKLKPVLFDKQSFNFFKSLKTVVEGKYDVCCNVPLDTVFEMDQHDADLNHECRLDY
VLIDHDSSEVKMVISDFGKEHNSPMKKLFSKFNINFIEMNQHKQWDTQSLKQALAV"
misc_feature 207648..>207890
/locus_tag="Sbal_0180"
/note="radical SAM peptide maturase, FibroRumin system;
Region: rSAM_FibroRumin; TIGR04136"
/db_xref="CDD:200387"
gene 208100..208561
/locus_tag="Sbal_0181"
/db_xref="GeneID:4842517"
CDS 208100..208561
/locus_tag="Sbal_0181"
/note="KEGG: she:Shewmr4_3764 formate-dependent nitrite
reductase"
/codon_start=1
/transl_table=11
/product="formate-dependent nitrite reductase"
/protein_id="YP_001048584.1"
/db_xref="GI:126172435"
/db_xref="InterPro:IPR011031"
/db_xref="GeneID:4842517"
/translation="MSKRQWLWSIRLGAIALLLSFGATSAESALQINSDTTCMKCHKR
NGQMLGHHGQDAMKMTCSTCHGEKGDHPKKPNDIVVFGMKDGSELDTQLAVCHKCHTQ
RKLGETEWTHNVHAQKVPCAACHKLHSPTEPMADMTPKVRSELCRNCHSGQ"
misc_feature 208187..208558
/locus_tag="Sbal_0181"
/note="cytochrome c nitrite reductase, pentaheme subunit;
Region: cyt_nit_nrfB; TIGR03146"
/db_xref="CDD:132190"
gene 208571..209257
/locus_tag="Sbal_0182"
/db_xref="GeneID:4842612"
CDS 208571..209257
/locus_tag="Sbal_0182"
/note="PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain
protein;
KEGG: she:Shewmr4_3763 twin-arginine translocation pathway
signal"
/codon_start=1
/transl_table=11
/product="4Fe-4S ferredoxin"
/protein_id="YP_001048585.1"
/db_xref="GI:126172436"
/db_xref="InterPro:IPR001450"
/db_xref="GeneID:4842612"
/translation="MENSKRRFLKGTCALFAGATGASLLATVNAAEGAKAESDIKYAM
IHDETKCIGCRACEVACRETNQVPEGVSRVRIEQTGPFGEYPNEYYHFSRISCQHCED
APCVNVCPTGAAFIDKETGIVSVNAWKCVGCQYCIAACPYKIRFINPVTHAADKCDFC
RETNLAQGKQPACVEACPTKALVFGNLKDPTSELVQVLRANPTQRAKVALGTRPKLFR
ILAKSGEVIL"
misc_feature 208580..209248
/locus_tag="Sbal_0182"
/note="cytochrome c nitrite reductase, Fe-S protein;
Region: cyt_nit_nrfC; TIGR03149"
/db_xref="CDD:163157"
gene 209254..210195
/locus_tag="Sbal_0183"
/db_xref="GeneID:4841805"
CDS 209254..210195
/locus_tag="Sbal_0183"
/note="PFAM: Polysulphide reductase, NrfD;
KEGG: shn:Shewana3_3960 polysulphide reductase, NrfD"
/codon_start=1
/transl_table=11
/product="polysulfide reductase, NrfD"
/protein_id="YP_001048586.1"
/db_xref="GI:126172437"
/db_xref="InterPro:IPR005614"
/db_xref="GeneID:4841805"
/translation="MSALHFDTLVWHWPIAIYLFLAGVSAGAMFFAVLLKHFVLKQNA
YQSGFVRAACIVAPVAVMAGLGILVADLTKPLDFWKILVFYNPKSVMSMGVLILLIYQ
VFMFMWIGLTFRKPVDAWCESRFPIVLKLTALLARFEATITGLLVILSLALGAYTGFL
LSALPGYPMLKNPVLPLLFLASGLSSGAASSLLGGVLMNGKPNDKEVHFIHKVEIPLI
LVEIVLLFTFFVGLLLTGGQSKIAAFNALGYGFWGWIFWVGIIGLGLSGPLAMNLFMT
TTSKRKWAYVAGTACLSLIGVLLLRNFILYTGQMTIA"
misc_feature 209257..210192
/locus_tag="Sbal_0183"
/note="Polysulphide reductase, NrfD; Region: NrfD;
cl01295"
/db_xref="CDD:212608"
misc_feature 209257..210192
/locus_tag="Sbal_0183"
/note="Formate-dependent nitrite reductase, membrane
component [Inorganic ion transport and metabolism];
Region: NrfD; COG3301"
/db_xref="CDD:33110"
gene complement(210474..210905)
/locus_tag="Sbal_0184"
/db_xref="GeneID:4844685"
CDS complement(210474..210905)
/locus_tag="Sbal_0184"
/note="PFAM: regulatory protein, AsnC/Lrp family;
KEGG: shn:Shewana3_3959 transcriptional regulator, AsnC
family"
/codon_start=1
/transl_table=11
/product="AsnC family transcriptional regulator"
/protein_id="YP_001048587.1"
/db_xref="GI:126172438"
/db_xref="InterPro:IPR000485"
/db_xref="GeneID:4844685"
/translation="MDKFDTAIIHSLRQDARQSVSNIAEQVNLSRSAVAERIKKLEQT
GVIRGYQVLLSESQKEGVSAYFEIQHQCPRCADVVHVFQAIPEVITCRGISGDMDLLV
YVHAPSMRRLHEIREYIDTHTDIIKIKTHVVMSEWINNLGE"
misc_feature complement(210588..210905)
/locus_tag="Sbal_0184"
/note="helix_turn_helix ASNC type; Region: HTH_ASNC;
smart00344"
/db_xref="CDD:197668"
misc_feature complement(<210702..210902)
/locus_tag="Sbal_0184"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature complement(order(210708..210716,210729..210737,
210777..210782,210786..210791,210798..210803,
210807..210818,210843..210851,210891..210899))
/locus_tag="Sbal_0184"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature complement(order(210840..210842,210849..210851))
/locus_tag="Sbal_0184"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
misc_feature complement(210498..210683)
/locus_tag="Sbal_0184"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:189815"
gene 211157..212419
/locus_tag="Sbal_0185"
/db_xref="GeneID:4842622"
CDS 211157..212419
/locus_tag="Sbal_0185"
/note="uncharacterized member of the APC superfamily of
amino acid transporters; unknown function"
/codon_start=1
/transl_table=11
/product="inner membrane protein YjeH"
/protein_id="YP_001048588.1"
/db_xref="GI:126172439"
/db_xref="InterPro:IPR004841"
/db_xref="GeneID:4842622"
/translation="MNSNSGTIGRWQGAGLMATTLLGTGVFILPQMTIEKAQSGALVA
WILLTLAIIPVALVFGRLASVFPHAAGPAYFVEKAFGRTAGRTIGLIFLLVVPMGAPA
AILMTFQFVNALMPISGWSKVGVEVLVIFGLFLINLRGIQVSAKLQFGLTLCIVAVVV
LLFGASSFQPGHLTTLASHGMPEMPTVMIAAGIAFWSFLGIEAMTHLADDFRRPQQDM
IPAMMMGTVLVGVIYVACTLLLLLVPTDKSVAMIGVFDQLLGGYGAQVIGVLGIASGL
ATVNVYSASAARLVWSFSCEGILPRFFAVKNAHGVPIRALAALLSVMASVIVLTYLTG
QELEHLIAWSNGVFVVIYLMAMLAAAKLLPRHNWPLVALGCAFCLALGFALGASMSYV
LVLILVVAPFLWWQKTHISRKQGLAIPE"
misc_feature 211172..>211864
/locus_tag="Sbal_0185"
/note="Spore germination protein; Region: Spore_permease;
cl15802"
/db_xref="CDD:210202"
misc_feature 211178..212395
/locus_tag="Sbal_0185"
/note="putative transporter; Provisional; Region:
PRK11021"
/db_xref="CDD:182905"
gene complement(212510..213121)
/locus_tag="Sbal_0186"
/db_xref="GeneID:4841797"
CDS complement(212510..213121)
/locus_tag="Sbal_0186"
/note="TIGRFAM: TonB family protein;
PFAM: Gram-negative tonB protein;
KEGG: shm:Shewmr7_3832 TonB family protein"
/codon_start=1
/transl_table=11
/product="TonB family protein"
/protein_id="YP_001048589.1"
/db_xref="GI:126172440"
/db_xref="InterPro:IPR003538"
/db_xref="InterPro:IPR006260"
/db_xref="GeneID:4841797"
/translation="MSQNALVSRTGLILASALITLGLFVFMAQLINNPQTITGQASDA
PQINILMAERTPIPPKEKTKPEPPKPIPVRERVSVPGETSESLTFTPETFMPEMPTQT
TLYTQSAMTAEALPVVQVSPRYPIDAAQSGKEGYVVVGFDITADGTVSNVRVLDANPK
RVFDKAALSAVQNWKYKPKFDAGKAVAQLNQQVQLDFKLDQKI"
misc_feature complement(212516..>212770)
/locus_tag="Sbal_0186"
/note="Periplasmic protein TonB, links inner and outer
membranes [Cell envelope biogenesis, outer membrane];
Region: TonB; COG0810"
/db_xref="CDD:31152"
misc_feature complement(212525..212764)
/locus_tag="Sbal_0186"
/note="Gram-negative bacterial tonB protein; Region: TonB;
pfam03544"
/db_xref="CDD:202680"
gene 213462..214286
/locus_tag="Sbal_0187"
/db_xref="GeneID:4841840"
CDS 213462..214286
/locus_tag="Sbal_0187"
/note="PFAM: HDOD;
KEGG: shn:Shewana3_3956 putative signal transduction
protein"
/codon_start=1
/transl_table=11
/product="putative signal transduction protein"
/protein_id="YP_001048590.1"
/db_xref="GI:126172441"
/db_xref="InterPro:IPR013976"
/db_xref="GeneID:4841840"
/translation="MDSAALLNRVDELPRLPKAISELLDAVNDDNATVKSIATKVAHD
PLISARVLRLANCAHYGRSREVGTIDEAVVRLGMQTLRTLVLASAVIGAVPKCEGIDL
AQFWGQTFEIALYSQEMAKRCGAIPEEAFTCGILHRIGDLLIAAVSPEDAAKIAEAVA
QGKDKHEFERELLGYDSPDIGALLAKNWKFTTALVEGILYQDHPKDSDPFSKLAALLC
LSYKVLDEWDTIEDDEKTSWLSQLATKKGLRMEMGGLRTKLTELRGSGFEIGKALA"
misc_feature 213498..214070
/locus_tag="Sbal_0187"
/note="HDOD domain; Region: HDOD; pfam08668"
/db_xref="CDD:204019"
gene complement(214571..215044)
/locus_tag="Sbal_0188"
/db_xref="GeneID:4842769"
CDS complement(214571..215044)
/locus_tag="Sbal_0188"
/note="PFAM: protein of unknown function DUF1332;
KEGG: son:SO4562 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048591.1"
/db_xref="GI:126172442"
/db_xref="InterPro:IPR010755"
/db_xref="GeneID:4842769"
/translation="MIAKLRRFFEAHTQAVSPEDKAHQLKLAAASMLLEVVFADDTLT
AEEEALLPKLLTDTLSMSEADAKILIDEAKSVQGSATSLFEFTSAINAEFSLAQKQQL
LLAMWQLAYADGQLSQYEDQIIRRTADLLYLKHSELIQMRNLAIAANRHIDQAPQ"
misc_feature complement(214652..214963)
/locus_tag="Sbal_0188"
/note="tellurium resistance terB-like protein, subgroup 2;
Region: terB_like_2; cd07313"
/db_xref="CDD:143584"
misc_feature complement(order(214685..214687,214706..214708,
214904..214906,214925..214927))
/locus_tag="Sbal_0188"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:143584"
gene complement(215145..215675)
/locus_tag="Sbal_0189"
/db_xref="GeneID:4842725"
CDS complement(215145..215675)
/locus_tag="Sbal_0189"
/note="KEGG: she:Shewmr4_3756 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048592.1"
/db_xref="GI:126172443"
/db_xref="GeneID:4842725"
/translation="MKHTLTLSIFLGTCILAAPASAGWLDNLAGTQAKTEKAATTATA
TQSNDLVGSVMSQLGLNQTQAEGGLGSLLGLAQSSLGTTDYSKLAASIPNADSLLAAA
PKLDSKSGVSGLLSKAGDLGSSLQGSAMVLDAFEKLGISKDLAMPMINIAKSYLDTNG
TEGTSDLLMKGLNSLL"
misc_feature complement(215157..215651)
/locus_tag="Sbal_0189"
/note="Protein of unknown function VcgC/VcgE (DUF2780);
Region: DUF2780; pfam11075"
/db_xref="CDD:151520"
gene 215865..216572
/locus_tag="Sbal_0190"
/db_xref="GeneID:4844938"
CDS 215865..216572
/locus_tag="Sbal_0190"
/note="KEGG: shm:Shewmr7_3828 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048593.1"
/db_xref="GI:126172444"
/db_xref="GeneID:4844938"
/translation="MSLSAILSEAYNFFRNHLAQLAMLTIPLLLIQVGIQLWLGVEMS
KVDLENPQFGVPHMVAMMLLLLTFSVLIAALTLFLELRSQGHSPSAGMVLKASLPFVP
PLLLAGVFSGLAILAPVMLFAAFGPLWLVGLVISFYLFARLAYVNFMVVVERLTPLEA
IKGSFSFSGPIVLRTIALLMLYLPLSVVGNLLSGAASMGGLPLQMLSDTFMSFIGLFV
NVALFRLYMVSKKPSVE"
gene 216606..218081
/locus_tag="Sbal_0191"
/db_xref="GeneID:4842319"
CDS 216606..218081
/locus_tag="Sbal_0191"
/note="PFAM: Sel1 domain protein repeat-containing
protein;
KEGG: she:Shewmr4_3754 Sel1 domain protein
repeat-containing protein"
/codon_start=1
/transl_table=11
/product="Sel1 domain-containing protein"
/protein_id="YP_001048594.1"
/db_xref="GI:126172445"
/db_xref="InterPro:IPR006597"
/db_xref="GeneID:4842319"
/translation="MGTKTVIKDSEFIQDFSASLSDDYLKAKSYVQDVPTQSLLHIRS
FTHKLTELLGQDKHIVFSSPNLYDRIEQLNQQRVIDVKTTRALHRLRADGNRGAHPEK
YHLTQAQLLALVQKSIKDVLALVEHLYPKVKGQVAPDYRYEASDAMTAKDLCYRAVME
DDAEAQYLVGISFKTKALILKEQELQQDQEFATSAEATSNPEFSGVSPLTSHISAADS
FARAAYWFALAAPRHMEALHEHGVALIHGYQGVPEVAKGEQLIATAAEAGVVNAMALL
GYFYLVGSESFQPDSKLALQYLQRAAEGEQTEAMANLGVLYYQQKNLTQAYHFISKAA
QAGYPHAQYHLALMLANGDGCTRDMIASEYWMAEAAEQGQLDAMLTRAQHMINDDNAF
GSDLTQAEDYLRQVIKYGHSVPAMIELSMALADGMLGRIDVVGAAALLKLARQHANKK
EAEIIEPLWRSLALQIKNVLKVTQDPAEIHSLNRAQTLLVI"
misc_feature 216684..216950
/locus_tag="Sbal_0191"
/note="Domain of unknown function (DUF4145); Region:
DUF4145; pfam13643"
/db_xref="CDD:205820"
misc_feature 217419..>217949
/locus_tag="Sbal_0191"
/note="FOG: TPR repeat, SEL1 subfamily [General function
prediction only]; Region: COG0790"
/db_xref="CDD:31133"
misc_feature 217620..217724
/locus_tag="Sbal_0191"
/note="Sel1-like repeats; Region: SEL1; smart00671"
/db_xref="CDD:197826"
gene complement(218167..218514)
/locus_tag="Sbal_0192"
/db_xref="GeneID:4844609"
CDS complement(218167..218514)
/locus_tag="Sbal_0192"
/note="KEGG: shm:Shewmr7_3826 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048595.1"
/db_xref="GI:126172446"
/db_xref="GeneID:4844609"
/translation="MIYQQFQQSPLQTRISGPRAWLAMAISVSLICLSLFLLPFVLLF
GAIALGCLVLFSRFYMARQLAKFNQAQANAKQHAHAADEPLSQVYGSETIVRESNATR
HQGRTFEHKEDEH"
gene 218889..220760
/locus_tag="Sbal_0193"
/db_xref="GeneID:4841806"
CDS 218889..220760
/locus_tag="Sbal_0193"
/note="PFAM: histidine kinase, HAMP region domain protein;
Cache domain protein; chemotaxis sensory transducer;
KEGG: shm:Shewmr7_3825 methyl-accepting chemotaxis sensory
transducer"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis sensory transducer"
/protein_id="YP_001048596.1"
/db_xref="GI:126172447"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR004010"
/db_xref="InterPro:IPR004089"
/db_xref="GeneID:4841806"
/translation="MNSYSLKQKILFSVVVALSLVIGLLSWQSYSSQKSQLLKNSLEQ
VQRLGEQQAERIQEWLAGRQDIMGALASKVEGDSLNTLQQAQASGRFQLTYFGSQAGQ
MLDSDPSVDRTGYDPRSRPWYQQAISARGPILTKPYVDVAYNILVVTMAQPTAQGVVG
GDLSIASLVDGVNRMKLPANGYAIMMHKDGTVIAYKDQAKTMKPIGEIDNDLNRNVPE
QSRAAGTLLPMYFENEGRDKLVWSVDIPNTDWELVLVLDKETLEAPLSSLLFTQLGLA
ALALLLSVLAISWLVGMLLGPLSRVSQALAHIADGNGDLTQRISVDTQDEVGVLADSF
NRFVGSQHQLISHIRQLANELDADAERSLATTQTSVTELQRQQQEVAMVATAVTEMAS
ATNEIAANAENTATAAQQSAASSLQGKELVNKTRNSINSLADEVTQATDVIADLSRHA
QSISSILATIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSRRTQDSTQE
VHTTIETLQRTTARAVSLMESSQALAGHSVEDANAAAKALEEITQAVNVISDMAGQIA
TAAEEQTQVTGEITQNTVAIKDVTDEITASAMADLAQARGLKARANDLNAQVATFIL"
misc_feature 219288..219479
/locus_tag="Sbal_0193"
/note="Cache domain; Region: Cache_1; pfam02743"
/db_xref="CDD:145738"
misc_feature 219768..219908
/locus_tag="Sbal_0193"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature order(219768..219773,219780..219785,219789..219794,
219801..219806,219810..219812,219864..219869,
219873..219878,219885..219890,219894..219899,
219906..219908)
/locus_tag="Sbal_0193"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature 220137..220634
/locus_tag="Sbal_0193"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature order(220137..220142,220149..220151,220158..220163,
220170..220175,220182..220184,220191..220196,
220200..220205,220215..220217,220221..220226,
220233..220235,220242..220247,220254..220259,
220266..220268,220275..220277,220284..220289,
220296..220298,220308..220310,220317..220319,
220338..220340,220350..220352,220359..220361,
220368..220373,220380..220382,220389..220394,
220401..220406,220410..220415,220422..220427,
220464..220469,220476..220478,220485..220490,
220497..220499,220506..220511,220515..220520,
220527..220532,220539..220541,220548..220553,
220560..220562,220569..220574,220578..220583,
220590..220595,220599..220604,220611..220613,
220620..220625,220632..220634)
/locus_tag="Sbal_0193"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature 220155..220751
/locus_tag="Sbal_0193"
/note="Methyl-accepting chemotaxis protein (MCP)
signalling domain; Region: MCPsignal; pfam00015"
/db_xref="CDD:143806"
misc_feature 220284..220385
/locus_tag="Sbal_0193"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene 221163..223034
/locus_tag="Sbal_0194"
/db_xref="GeneID:4844123"
CDS 221163..223034
/locus_tag="Sbal_0194"
/note="PFAM: histidine kinase, HAMP region domain protein;
Cache domain protein; chemotaxis sensory transducer;
KEGG: shm:Shewmr7_3825 methyl-accepting chemotaxis sensory
transducer"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis sensory transducer"
/protein_id="YP_001048597.1"
/db_xref="GI:126172448"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR004010"
/db_xref="InterPro:IPR004089"
/db_xref="GeneID:4844123"
/translation="MKSYSLRQKILLSVILALSAVILLLSWQSYTSQKKVLLDVNLEQ
AQRLGDQQALLIGEWLASRQKIVKGLAGQRNNDIVQAMKQAKQSGGFESTYFGESNGN
MRDSEPATDYTNYDPRTRPWYQEAMRTGGSVLTRPYLDTAFNILVVTLAEPVAGGVIA
GDLSISNLIEEVNRMKLPANGYAIMMHKDGTVIAYKDQAKTMKPIGEIDNELNNNLPE
LSRTTSTLLPMYFEGEARDKLVWGVDIPNTDWELVLVLDKETLEAPLSSLLLTQFGLS
ALVLILSVLAISWLVSVLLGPLSRVSQALARIADGNGDLTQRISVDTQDEVGVLADSF
NRFVGSQHQLISHIRQLANELDADAERSLATTQTSVTELQRQQQEVAMVATAVTEMAS
ATNEIAANAENTATAAQQSAASSLQGKELVNKTRNSINSLADEVAQATDVIEDLSRHA
KSISSILATIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSRRTQDSTQE
VHTTIETLQRTTARAVSLMESSQALAGHSVEDANAAAKALEEITQAVNVISDMAGQIA
TAAEEQTQVTGEITQNTVAIKDVTDEITASAMADLAQARGLKARANDLNAQVATFIL"
misc_feature 221562..221753
/locus_tag="Sbal_0194"
/note="Cache domain; Region: Cache_1; pfam02743"
/db_xref="CDD:145738"
misc_feature 222051..222182
/locus_tag="Sbal_0194"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature order(222054..222059,222063..222068,222075..222080,
222084..222086,222138..222143,222147..222152,
222159..222164,222168..222173,222180..222182)
/locus_tag="Sbal_0194"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature 222411..222908
/locus_tag="Sbal_0194"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature order(222411..222416,222423..222425,222432..222437,
222444..222449,222456..222458,222465..222470,
222474..222479,222489..222491,222495..222500,
222507..222509,222516..222521,222528..222533,
222540..222542,222549..222551,222558..222563,
222570..222572,222582..222584,222591..222593,
222612..222614,222624..222626,222633..222635,
222642..222647,222654..222656,222663..222668,
222675..222680,222684..222689,222696..222701,
222738..222743,222750..222752,222759..222764,
222771..222773,222780..222785,222789..222794,
222801..222806,222813..222815,222822..222827,
222834..222836,222843..222848,222852..222857,
222864..222869,222873..222878,222885..222887,
222894..222899,222906..222908)
/locus_tag="Sbal_0194"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature 222429..223025
/locus_tag="Sbal_0194"
/note="Methyl-accepting chemotaxis protein (MCP)
signalling domain; Region: MCPsignal; pfam00015"
/db_xref="CDD:143806"
misc_feature 222558..222659
/locus_tag="Sbal_0194"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene complement(223119..224090)
/locus_tag="Sbal_0195"
/db_xref="GeneID:4845811"
CDS complement(223119..224090)
/locus_tag="Sbal_0195"
/note="PFAM: regulatory protein, LysR; LysR,
substrate-binding;
KEGG: shm:Shewmr7_3824 transcriptional regulator, LysR
family"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_001048598.1"
/db_xref="GI:126172449"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:4845811"
/translation="MNIDNLARIDLNLLVILKVLLEEQSVTRAASRLHISQSALSKSL
NRLRETLDDPLFQRTAHGLKPTAHALILGQKLPNILQDLYQLTQPPTFNPASSNRQFS
FAMVESAYETLIPYFIGPMLTTAPNVKLDSYVWTEKSMQDLQQGQIDFGISGRDLHPL
SDFQVDRLPEGIAYQTLFTDQQVCLVREDHPLMAALTSAQWKLPLYLDMAHVQVRCEG
SDWWALDYFLADLGHRRRISTTVPDFYGAASVCAHSDLIFTLPSSFARHACQLYPLKL
LPLPFEFMPMAYVLLWHQRNDEDQGHKWIRETICESVAKLFTPAEIL"
misc_feature complement(223164..224075)
/locus_tag="Sbal_0195"
/note="DNA-binding transcriptional regulator YidZ;
Provisional; Region: PRK10216"
/db_xref="CDD:182312"
misc_feature complement(223884..224027)
/locus_tag="Sbal_0195"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(223158..223793)
/locus_tag="Sbal_0195"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulators that involved in the
catabolism of nitroaromatic/naphthalene compounds and that
of related regulators; contains the type 2 periplasmic
binding fold; Region: PBP2_Nitroaromatics_like; cd08417"
/db_xref="CDD:176109"
misc_feature complement(order(223227..223229,223428..223430,
223551..223553,223752..223754,223764..223769,
223773..223775))
/locus_tag="Sbal_0195"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:176109"
misc_feature complement(order(223332..223334,223341..223346,
223353..223358,223365..223379,223461..223463,
223689..223691,223695..223709,223713..223718,
223725..223730,223734..223739,223746..223751,
223758..223763,223770..223772))
/locus_tag="Sbal_0195"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176109"
gene 224204..225412
/locus_tag="Sbal_0196"
/db_xref="GeneID:4843951"
CDS 224204..225412
/locus_tag="Sbal_0196"
/note="TIGRFAM: drug resistance transporter, Bcr/CflA
subfamily;
PFAM: major facilitator superfamily MFS_1;
KEGG: she:Shewmr4_3750 drug resistance transporter,
Bcr/CflA subfamily"
/codon_start=1
/transl_table=11
/product="Bcr/CflA subfamily drug resistance transporter"
/protein_id="YP_001048599.1"
/db_xref="GI:126172450"
/db_xref="InterPro:IPR004812"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:4843951"
/translation="MRRNLLPILMSMVLLSPLAIDIYLPSMPTMAAEFAVSASDVQST
IVLFLFAMGLGQVLIGPLADRYGRRPVAIFGVLLYGASSLLAAAAIEFHWLQIARLLQ
GLAACSTSIVVFSAVRDCYDQKEGAKIYSYLNGAICVIPALAPTLGGLLAMQFGWRST
FVFMTLYAMLMLLVVGYRLPETRPANTVTTGPLYRWGRYKPVLGNTHFLFYAFACMSA
MAAILCYVSYAPVWLIGHLGLSELMFSGLFGFNAVFNIVACFTAPLVIRKLGNRPTTI
LALSILVLSAAITVAGQQFGPSTGMMAAFAFMLPMLMLGVGFSFLLGPATSMALSAFG
ERAGTAAAMLGFIQMSGASVLAGLVQQTNLTAPYAVALVMGVFPIGLLLMMALSRFDH
WHQEQLAGEH"
misc_feature 224219..>225022
/locus_tag="Sbal_0196"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 224237..225379
/locus_tag="Sbal_0196"
/note="multidrug efflux system protein MdtL; Provisional;
Region: PRK10473"
/db_xref="CDD:182486"
misc_feature order(224261..224263,224270..224278,224282..224287,
224336..224338,224345..224350,224357..224359,
224369..224374,224378..224383,224519..224524,
224531..224536,224543..224548,224555..224557,
224591..224596,224603..224608,224624..224626,
224858..224860,224867..224872,224879..224884,
224891..224893,224933..224935,224945..224947,
224957..224959,224966..224968,224978..224980)
/locus_tag="Sbal_0196"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(225584..226417)
/locus_tag="Sbal_0197"
/db_xref="GeneID:4844976"
CDS complement(225584..226417)
/locus_tag="Sbal_0197"
/note="KEGG: sfr:Sfri_3123 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048600.1"
/db_xref="GI:126172451"
/db_xref="GeneID:4844976"
/translation="MHKRLISIAVVFGLLSTNTFAATDKAYQHDANINYGASSEAFSD
GGWSADYRYYSTPVSQDSAPYALSGFLAQTSNFGGKYSFNDDIDSYGVNGEYVFASKW
FVGANYFNLDSNFYDANTYGMNLGYYFNATSAVYASYSSSDGDYDAGLSAKGNSDTDA
FGIGIRSFIPLQSTAGIDLQANVYYSQSDNTLANGPNGQYNNSNNSTTVNLAADWYIT
RAWSIGANYSIQDDEDPYGINTAYHWRITDLISARAGIAKSLEPDWDGVDISLSLNGR
F"
gene 226642..227265
/locus_tag="Sbal_0198"
/db_xref="GeneID:4844144"
CDS 226642..227265
/locus_tag="Sbal_0198"
/note="PFAM: DTW domain containing protein;
KEGG: shn:Shewana3_3947 DTW domain containing protein"
/codon_start=1
/transl_table=11
/product="DTW domain-containing protein"
/protein_id="YP_001048601.1"
/db_xref="GI:126172452"
/db_xref="InterPro:IPR005636"
/db_xref="GeneID:4844144"
/translation="MPRFYCAICRYPLNACLCASVQPISPMTQLVVLQHPSEVEHKKN
SVRVLSLVVAETQVYVGESEADFNGLREHLTACNKPIYLVYPSEQSVSVEQQPINPDC
VLLLLDGTWRKAFKMLQLNPWLTQYPAVHLAEGYESRYRIRKSSRSDSLSTLEACAYM
LSALDPRLDVQPLMTAFDAMVELRIKAMPSTVQARYQNSNKPNCETK"
misc_feature 226642..227208
/locus_tag="Sbal_0198"
/note="DTW domain; Region: DTW; cl01221"
/db_xref="CDD:154271"
gene complement(227527..229647)
/locus_tag="Sbal_0199"
/db_xref="GeneID:4844572"
CDS complement(227527..229647)
/locus_tag="Sbal_0199"
/note="KEGG: son:SO4552 sensory box protein;
TIGRFAM: PAS sensor protein; diguanylate cyclase;
PFAM: GGDEF domain containing protein; EAL domain protein;
PAS fold domain protein;
SMART: PAS domain containing protein"
/codon_start=1
/transl_table=11
/product="PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase"
/protein_id="YP_001048602.1"
/db_xref="GI:126172453"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR001633"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:4844572"
/translation="MIRWQHLLKKLSTDDPVLQEKLSLWQAHPHKTPLALIQGFSFIS
ANQAALGYFEAEYDAFVNATPYDFSPRIQSSGRNSVEYAREMILEAIAGKNVEFNWLH
LSQVGNELPTRVYLYRCYLQQQPVVLVEFQALNRRNQLRATISDGFAHIPKEILSTTL
EESAEAVYITDTDDHILAVNKAMCRICGYSAEQLISKTPEFLELKSHHLGEETECQIA
LKQRGFWQGETWKKRSDGSNFPAWQSSRKIITEDGDHYNVNIFSDISTKKLLETQLTT
RAMYDTLTGLPNRFHLKQILNKALEKLKTDPLTLGALMFLDLNGFKNINDSFGHSMGD
RVLQLVAARLEAGCIEKADIARMGGDEFTLVLQDCSCKDEIQLFAEQILSLFESPFEI
EGQKFFLGTSIGIALFPTHSDKAGQLISLADTAMYCAKKSLPHLVFYDKAMSQAAELK
LQLINSLRHAHSLKQFTLAYQAIVDLHTNQTIAAEALLRWQKSPTEYYDAADFVPLLE
ETGLIVSIGQWVLEQACVQAALWRAHNQADFRISVNVSPLQLEHLDFIDQVINALEMA
NLPAEALILEITESALLRQPEQARLTLNRIKALGVSIAIDDFGTGLSSLSRLGTLPID
SVKIDAEFALRLNEVSGQKLCNAIVQLAQALDIHFVAEGIETQQQRDIMTDMGQGFAQ
GFLFGYPSSVDNFTQTFLTEKHIA"
misc_feature complement(228865..229161)
/locus_tag="Sbal_0199"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature complement(228853..229149)
/locus_tag="Sbal_0199"
/note="PAS domain; Region: PAS_9; pfam13426"
/db_xref="CDD:205604"
misc_feature complement(order(228940..228942,228955..228957,
229033..229044,229081..229083,229099..229101,
229111..229113))
/locus_tag="Sbal_0199"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature complement(order(228913..228915,228919..228921,
229003..229008,229015..229017,229039..229041,
229051..229053))
/locus_tag="Sbal_0199"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature complement(228352..228813)
/locus_tag="Sbal_0199"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(228568..228570,228697..228699))
/locus_tag="Sbal_0199"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(228565..228576,228580..228582,
228646..228648,228658..228660,228670..228675,
228682..228684))
/locus_tag="Sbal_0199"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(228505..228507,228592..228594))
/locus_tag="Sbal_0199"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature complement(227566..228285)
/locus_tag="Sbal_0199"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene 229974..230312
/locus_tag="Sbal_0200"
/db_xref="GeneID:4842123"
CDS 229974..230312
/locus_tag="Sbal_0200"
/note="KEGG: she:Shewmr4_3747 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048603.1"
/db_xref="GI:126172454"
/db_xref="GeneID:4842123"
/translation="MLMPLILISSVYFAVANAAESPKPKLTLEQRADKARIDSQRLEQ
AQLEKARQATKETAEREDKIKQQSQTNDWEAQQKLKAQKQFDERESREQKYLREAKEA
AAKERKIPKP"
gene 230420..231073
/locus_tag="Sbal_0201"
/db_xref="GeneID:4841603"
CDS 230420..231073
/locus_tag="Sbal_0201"
/note="PFAM: Methyltransferase type 11; Methyltransferase
type 12;
KEGG: shn:Shewana3_3944 methyltransferase type 11"
/codon_start=1
/transl_table=11
/product="type 11 methyltransferase"
/protein_id="YP_001048604.1"
/db_xref="GI:126172455"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:4841603"
/translation="MLNICPLCHGTELLVYHQDKKRDYHQCQICQLVSVPPEFYLSAE
AEKAEYDKHENRADDLGYQTFLNRTLEPLLSRVSTSAKGLDFGCGEGKALSMMAKARG
YQIDNYDLYYANNPEALARQYDFITLTEVIEHVSDAAGLLAQLDRLLKPNGILAVMTK
RVQDQTAFTRWHYKNDPTHINFYAEATFEWLAHHYGWRLEIIDKDVVFLYKEMHKVN"
misc_feature 230606..231019
/locus_tag="Sbal_0201"
/note="Methyltransferase domain; Region: Methyltransf_23;
pfam13489"
/db_xref="CDD:205667"
misc_feature 230663..230893
/locus_tag="Sbal_0201"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(230675..230695,230744..230749,230804..230806)
/locus_tag="Sbal_0201"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(231159..231488)
/locus_tag="Sbal_0202"
/db_xref="GeneID:4841510"
CDS complement(231159..231488)
/locus_tag="Sbal_0202"
/note="PFAM: Antibiotic biosynthesis monooxygenase;
KEGG: hch:HCH_05533 uncharacterized enzyme involved in
biosynthesis of extracellular polysaccharides"
/codon_start=1
/transl_table=11
/product="antibiotic biosynthesis monooxygenase"
/protein_id="YP_001048605.1"
/db_xref="GI:126172456"
/db_xref="InterPro:IPR007138"
/db_xref="GeneID:4841510"
/translation="MMVVIFEVVPNPGCQERYLEIAADLKSSLSEIAGFISIERFQSM
VNPERLLSLSFWENEAAVQAWRRQIYHREAQTQGHEQLFADYRLRVAEVVRDYGMFDR
AQAPRSN"
misc_feature complement(231192..231488)
/locus_tag="Sbal_0202"
/note="Uncharacterized enzyme involved in biosynthesis of
extracellular polysaccharides [General function prediction
only]; Region: COG2329"
/db_xref="CDD:32481"
gene complement(231485..231868)
/locus_tag="Sbal_0203"
/db_xref="GeneID:4844705"
CDS complement(231485..231868)
/locus_tag="Sbal_0203"
/note="PFAM: NIPSNAP family containing protein;
KEGG: hch:HCH_05534 hypothetical protein"
/codon_start=1
/transl_table=11
/product="NIPSNAP family protein"
/protein_id="YP_001048606.1"
/db_xref="GI:126172457"
/db_xref="InterPro:IPR012577"
/db_xref="GeneID:4844705"
/translation="MQLKPLAHKPMAPNTMKITCFIEYKIDPFKLEQFAQYAENWGDI
IPVYGGELLGYFLPHEGTNDTAFGLISFDSLAHYERYRYKLKTEAAGKANFQLAKQGE
FILSEKRSFLKPIAKTYQRAAETKL"
misc_feature complement(231521..231808)
/locus_tag="Sbal_0203"
/note="NIPSNAP; Region: NIPSNAP; pfam07978"
/db_xref="CDD:191913"
gene 231897..232652
/locus_tag="Sbal_0204"
/db_xref="GeneID:4844706"
CDS 231897..232652
/locus_tag="Sbal_0204"
/note="PFAM: regulatory protein, ArsR;
KEGG: hch:HCH_05536 predicted transcriptional regulator"
/codon_start=1
/transl_table=11
/product="regulatory protein ArsR"
/protein_id="YP_001048607.1"
/db_xref="GI:126172458"
/db_xref="InterPro:IPR001845"
/db_xref="GeneID:4844706"
/translation="MVIELSPNEITSMEPNIAFIANLIGDAARSRMLIALMGGEALTA
TELALEADITPQTASSHLTKLVEGELLLVRKQGRHKYFQLQSRQVAELLESLLNMSAA
IANPNVIHGPADPRLRLARICYDHLAGELGVALYDSLSRQDLIVHEGGETKITAAGMT
FFAKRGVEHSLLGAPDDVFDVPKSRQSRRPLCKSCLDWSERRSHLAGVLGQWVLKDIL
AKGWAEKALDTRALQFSSRGLKSFRADYGIESK"
misc_feature 231957..232190
/locus_tag="Sbal_0204"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature order(231957..231962,231966..231968,231975..231977,
231984..231989,231996..232001,232008..232010,
232101..232103,232158..232163,232167..232175,
232179..232187)
/locus_tag="Sbal_0204"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:28974"
misc_feature order(231960..231965,231975..231983,232020..232028,
232056..232067,232071..232076,232083..232088,
232092..232097,232113..232121,232134..232142)
/locus_tag="Sbal_0204"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(232020..232022,232029..232031,232158..232160)
/locus_tag="Sbal_0204"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
gene 233540..233731
/locus_tag="Sbal_0205"
/db_xref="GeneID:4845705"
CDS 233540..233731
/locus_tag="Sbal_0205"
/note="KEGG: sfr:Sfri_0292 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048608.1"
/db_xref="GI:126172459"
/db_xref="GeneID:4845705"
/translation="MSQFKLELAESELKYVLEGLMALELQMAETCEASDDPDEIADIG
NDLIELRLLLNPLKEKAIS"
gene 234359..235774
/locus_tag="Sbal_0206"
/db_xref="GeneID:4843055"
CDS 234359..235774
/locus_tag="Sbal_0206"
/EC_number="3.5.1.14"
/note="KEGG: shn:Shewana3_3941 amidohydrolase;
TIGRFAM: amidohydrolase;
PFAM: peptidase M20; peptidase dimerisation domain
protein"
/codon_start=1
/transl_table=11
/product="amidohydrolase"
/protein_id="YP_001048609.1"
/db_xref="GI:126172460"
/db_xref="InterPro:IPR002933"
/db_xref="InterPro:IPR010168"
/db_xref="InterPro:IPR011650"
/db_xref="GeneID:4843055"
/translation="MTLPSVSPSAISKSAIPKAFEFKSFANKAIFSKTLLASALALSF
MGAGLNSAQAATNTMPDAAKLAAGVEQKVIDWRRDLHQHPELSNREFRTSKIIEKHLK
SLGLEVQTGVAHTGVVAILKGGKLKGGKSGPLIAIRADMDALPVTEVVDLPFASKATD
TYRNQKVGVMHACGHDTHVAMLMGVAENLVKVKDSLAGDVMFIFQPAEEGAPDGEEGG
AELMLKEGLFAKRKPDQVFGMHVTSSMPSGMIGVRSGPAMASEDSFTIKVKGRQTHGS
RPWNGVDPIVAAAQIITNVQTIVSRQVDITKAPAVVSFGAVNGGIRSNIIPDEVELIG
TIRTFDQPMRADIKVRLAEMAELSAKTLGASATTEIHPGYPVVVNNPELVASMRPVLA
SVVGDKMLIEPGLITGAEDFSYYALEAPGMFFFLGVTPKGTDPETAASNHSPAFYVDE
SALKVGVEAMTKVALTALNAQ"
misc_feature 234539..235771
/locus_tag="Sbal_0206"
/note="Metal-dependent
amidase/aminoacylase/carboxypeptidase [General function
prediction only]; Region: AbgB; COG1473"
/db_xref="CDD:31662"
misc_feature 234542..235753
/locus_tag="Sbal_0206"
/note="M20 Peptidase Aminoacylase 1 subfamily; Region:
M20_Acy1_like2; cd05667"
/db_xref="CDD:193543"
misc_feature order(234875..234877,234881..234883,234983..234985,
235076..235078,235682..235684)
/locus_tag="Sbal_0206"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193543"
misc_feature order(235145..235147,235211..235216,235226..235228,
235235..235237,235244..235246,235298..235318,
235328..235333,235337..235339,235355..235363)
/locus_tag="Sbal_0206"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:193543"
gene 235912..237243
/locus_tag="Sbal_0207"
/db_xref="GeneID:4842684"
CDS 235912..237243
/locus_tag="Sbal_0207"
/note="PFAM: peptidase M16 domain protein;
KEGG: son:SO4537.2 hypothetical Zn-dependent peptidase"
/codon_start=1
/transl_table=11
/product="peptidase M16 domain-containing protein"
/protein_id="YP_001048610.1"
/db_xref="GI:126172461"
/db_xref="InterPro:IPR007863"
/db_xref="InterPro:IPR011765"
/db_xref="GeneID:4842684"
/translation="MKRTLSALVLAMGLFNPLSQAQATTAEDIKSFTLDNGMKIMVLE
DASIPNANMYLFWKVGSRNEVPGITGISHFFEHMMFNGSKKYGPKMFDRTMEAAGGAN
NAYTTEDMTVYTDWFPANALETMFDLEADRIANLDINQTMVDSERGVVQSERSTGLEN
SNWNALEGEIKGVAFLAHPYSWSVIGHESDIAAWTLEDLVQYHKTYYAPNNAVVVIAG
DVKVAQVKALADKYFAPIPAQTPPKAIRTVEPEQKGERRTFVQKASVSTPNVMLAYHI
PAATHADFYALDLLSSILSQGNSSRLYQSLVDKQVALEAQTYMPMSVDPNLFYVMGVA
TPEVKASTLEQALIEQIDAIATMGVTQQELDKVKNIKLMDFYRSMETINGKANTIGTY
EMYFGSYDKLFNAPEAYNKVTPADIQRVAQTYLRKSNRTVAVLAANEEISQ"
misc_feature 235963..237234
/locus_tag="Sbal_0207"
/note="Predicted Zn-dependent peptidases [General function
prediction only]; Region: PqqL; COG0612"
/db_xref="CDD:30957"
misc_feature 236026..>236373
/locus_tag="Sbal_0207"
/note="Insulinase (Peptidase family M16); Region:
Peptidase_M16; pfam00675"
/db_xref="CDD:201385"
misc_feature 236488..237021
/locus_tag="Sbal_0207"
/note="Peptidase M16 inactive domain; Region:
Peptidase_M16_C; pfam05193"
/db_xref="CDD:203199"
gene 237240..238703
/locus_tag="Sbal_0208"
/db_xref="GeneID:4842197"
CDS 237240..238703
/locus_tag="Sbal_0208"
/note="PFAM: peptidase M16 domain protein;
KEGG: shm:Shewmr7_3814 peptidase M16 domain protein"
/codon_start=1
/transl_table=11
/product="peptidase M16 domain-containing protein"
/protein_id="YP_001048611.1"
/db_xref="GI:126172462"
/db_xref="InterPro:IPR000437"
/db_xref="InterPro:IPR007863"
/db_xref="InterPro:IPR011765"
/db_xref="GeneID:4842197"
/translation="MKSMAMKSLKMASLGKPSKLMAALALGTSLALAGCATTSAPKRV
ETGSFVMPSYDKFVLDNGLTVYLMPQREVPLVTLNAVVRAGAVNDTTAGVAQMTAEGL
LLGAAGKSKADIEQQVDFLGASLGAEADKEGSYLSADFMAKDTDVMLGLFSAAMLTPD
FDAAEFDKLKQRAIAGLQQDKESPRAVIGRYFDKLVFGAHPYGNAASGNSDSLEQVTV
SQLRAFHKSYYQPANTAITVVGDFDVAAMKAKLTQTFGQWKGSEKLVQPDLNQGLPQL
TAAKVLLVDKPDAIETTFVIGGLGISRDNPDYVGLTVVNTILGGRFTSWLNDELRVNA
GLTYGARSGFSPYTDSGVFTISTFTKTETTQEAIDLALKTYARLWEKGVDQTTLDSAK
AYVKGQFPPKFETSGQLAGLLSGMYLYGFDDKFINEFQAKVDGLTLEETQRLVKTYFP
QKDLQFVLIGNAAKIAPIAAKYGKVQTVDIKATGFGQ"
misc_feature 237390..238640
/locus_tag="Sbal_0208"
/note="Predicted Zn-dependent peptidases [General function
prediction only]; Region: PqqL; COG0612"
/db_xref="CDD:30957"
misc_feature 237465..237863
/locus_tag="Sbal_0208"
/note="Insulinase (Peptidase family M16); Region:
Peptidase_M16; pfam00675"
/db_xref="CDD:201385"
misc_feature 237885..238418
/locus_tag="Sbal_0208"
/note="Peptidase M16 inactive domain; Region:
Peptidase_M16_C; pfam05193"
/db_xref="CDD:203199"
gene complement(238822..240918)
/locus_tag="Sbal_0209"
/db_xref="GeneID:4843826"
CDS complement(238822..240918)
/locus_tag="Sbal_0209"
/note="PFAM: peptidase S9, prolyl oligopeptidase active
site domain protein; WD40 domain protein beta Propeller;
KEGG: shm:Shewmr7_3813 peptidase S9, prolyl oligopeptidase
active site domain protein"
/codon_start=1
/transl_table=11
/product="peptidase S9 prolyl oligopeptidase"
/protein_id="YP_001048612.1"
/db_xref="GI:126172463"
/db_xref="InterPro:IPR001375"
/db_xref="InterPro:IPR002471"
/db_xref="InterPro:IPR011659"
/db_xref="GeneID:4843826"
/translation="MLTCYLAKIRNIIILVTVCITRRHIVKKTGILLLCLLMPFSSAF
ADQGKPLSAELLWQLKRIGSPIVSPTGEHIIAPVTEYDLKADKGSTQLWHFDGKHNRA
ITAKGLRVSEPVFSPDGKTLAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSI
KWVGKHLYFISNIFPNQSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAH
VFRIPAKGGNVENITQPAGHELPRSDQSSASYDVSPNERWIAFNAYGSENKVDPKIDI
FLATIGGNKAENLTADNQAPDLNPSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSR
KLTTLTSDWDRSVSQFSWTPDNKGFYATVEDAATNRIYSIDAKNGKVKAITEATDFSQ
PAIGKDGELIATNQSFLYPARLVSINPRNGKIERLENFNDDILKDVDLGTYESVTYKG
YQGKDIQMWVHYPAGFDRSKKYPLFMLVHGGPHNAITNGFHFRWNAQTFASWGYVTAW
PNFHGSSGFGQEFADSINPDWKTKPLEDVLKAADWFKQQSWIDSDRMVAGGASYGGYL
TSIILGQPHPFKALLIHAAVYDMYAQMASDFAVHSTRFGNYWDNPELYKAISPHYFAA
NFNTPTLVSHGQLDYLVPATQGFELFHTLQSRHVESRMIYFPDENHWIMKPNNSVYWY
NEVKKWMTHFAEPGAR"
misc_feature complement(238846..240774)
/locus_tag="Sbal_0209"
/note="Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
[Amino acid transport and metabolism]; Region: DAP2;
COG1506"
/db_xref="CDD:31695"
misc_feature complement(240508..>240585)
/locus_tag="Sbal_0209"
/note="WD40-like Beta Propeller Repeat; Region: PD40;
pfam07676"
/db_xref="CDD:203719"
misc_feature complement(238852..239451)
/locus_tag="Sbal_0209"
/note="Prolyl oligopeptidase family; Region: Peptidase_S9;
pfam00326"
/db_xref="CDD:201156"
gene 241138..241710
/locus_tag="Sbal_0210"
/db_xref="GeneID:4841547"
CDS 241138..241710
/locus_tag="Sbal_0210"
/note="KEGG: shn:Shewana3_3937 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048613.1"
/db_xref="GI:126172464"
/db_xref="GeneID:4841547"
/translation="MPLKIDRLNLMLVFATLLSVFSSSSVMAAKVSFKEFCPQLVGQW
AGDAAKAGEIPRNVAVTGFCSHDQRQLILSVSIGTKAPFSETWWFREQGDQVLLTYYD
GVAEDKQQVFSLYRQNGDYSLLGEGVVNARPALIQLLFDAQTQTQTQAQAQNQAGGWQ
WTQNIQYLDDDIDRYQLFRGIEMTPVAPSP"
gene complement(241753..242217)
/locus_tag="Sbal_0211"
/db_xref="GeneID:4844718"
CDS complement(241753..242217)
/locus_tag="Sbal_0211"
/note="TIGRFAM: RNA methyltransferase, TrmH family, group
2;
PFAM: tRNA/rRNA methyltransferase (SpoU);
KEGG: shn:Shewana3_3934 RNA methyltransferase, TrmH
family, group 2"
/codon_start=1
/transl_table=11
/product="RNA methyltransferase"
/protein_id="YP_001048614.1"
/db_xref="GI:126172465"
/db_xref="InterPro:IPR001537"
/db_xref="InterPro:IPR004440"
/db_xref="GeneID:4844718"
/translation="MFHIALYEPEIAPNTGNIIRLCANNGSQLHLIEPLGFDLEEKKL
RRAGLDYADLTNVTRHKDFDAFLEAMAGKRIMACTTKGSRPHTELSFAKDDVLLFGPE
TRGLPMAIIESIPTEQRLRIPMAATSRSLNLSNAVAIISYEAWRQLDFAGAL"
misc_feature complement(241759..242217)
/locus_tag="Sbal_0211"
/note="Predicted rRNA methylase (SpoU class) [Translation,
ribosomal structure and biogenesis]; Region: CspR;
COG0219"
/db_xref="CDD:30568"
gene 242378..243151
/locus_tag="Sbal_0212"
/db_xref="GeneID:4841990"
CDS 242378..243151
/locus_tag="Sbal_0212"
/note="KEGG: son:SO4528 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048615.1"
/db_xref="GI:126172466"
/db_xref="GeneID:4841990"
/translation="MFSHFITLFIFYVLFLQSIFTPAYAADDAVTSAGGKRQMTAYLG
EIPGLINADGTGPFVELVKAIDRADPEVEIDIKVFPLSRAMLGVTLGRADFGLPAIRN
NAALDALPYRFSSVSFGQVTHVLYTNVDKPITKAMLFDQQQTGRVFTVEAIPDYMPIP
AEPSITIKRSLLKLSHGRIDAFVWAQEEADMMLKQLKLHNIHREDFGDFEDVFVIAKG
PEGDAVDAYLSRMIELLRQTGELSQIYQTIHLSYNDWQP"
misc_feature 242519..243115
/locus_tag="Sbal_0212"
/note="Bacterial periplasmic substrate-binding proteins;
Region: PBPb; smart00062"
/db_xref="CDD:197497"
misc_feature 242540..243115
/locus_tag="Sbal_0212"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cl15306"
/db_xref="CDD:199164"
misc_feature order(242618..242620,242711..242713,242807..242809,
242927..242929)
/locus_tag="Sbal_0212"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29040"
misc_feature order(242879..242881,242891..242893,242909..242911)
/locus_tag="Sbal_0212"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:29040"
misc_feature 243002..243019
/locus_tag="Sbal_0212"
/note="hinge residues; other site"
/db_xref="CDD:29040"
gene 243278..244135
/locus_tag="Sbal_0213"
/db_xref="GeneID:4845595"
CDS 243278..244135
/locus_tag="Sbal_0213"
/note="PFAM: protein of unknown function DUF6,
transmembrane;
KEGG: shm:Shewmr7_3806 protein of unknown function DUF6,
transmembrane"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048616.1"
/db_xref="GI:126172467"
/db_xref="InterPro:IPR000620"
/db_xref="GeneID:4845595"
/translation="MPFVIALLAPVFWGTTYALVSLYLHDMSPYWVAVWRALPAGILM
LMLRPRLPTLVWSKLGLLAFCNIGAFFTLLFIGAYRLPVAVAGTLGATLPLIFLILAW
VIDKKRPGMKWLLLGLMGLGGVILLLNPSADLDPIGVLCMLSATTLIAFSSRWMQKWD
VGDFLVLTAWQLFLGGLMLIPLAWFMAGPPQLPSLTVVPSLIWLVIANTAIAYWAWLW
SMRNLGPEIMGMVALVNPVVAVSLGVIIVGETLDMRQWAGIGVILLSLLLMKLPQNLR
LNPFKKVQP"
misc_feature 243314..244078
/locus_tag="Sbal_0213"
/note="Carboxylate/Amino Acid/Amine Transporter; Region:
2A78; TIGR00950"
/db_xref="CDD:162128"
misc_feature 243764..244084
/locus_tag="Sbal_0213"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:144477"
gene 244164..245105
/locus_tag="Sbal_0214"
/db_xref="GeneID:4843416"
CDS 244164..245105
/locus_tag="Sbal_0214"
/note="PFAM: regulatory protein, LysR; LysR,
substrate-binding;
KEGG: shm:Shewmr7_3805 transcriptional regulator, LysR
family"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_001048617.1"
/db_xref="GI:126172468"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:4843416"
/translation="MLKRLDLNLLPVLEILLEEQSVTAAAARLHLSQSAVSKQLTRLR
EVFDDPLFERTAYGLKPTPKALSLAPELRQCLQQLAQFTRPDTFEPALSQRQFRMHLV
ETTYSLTFPHFMPSLLAQAPGVSLNCQTWRLDTMDRLLRCDIDLAIGCREWDERSPMH
VSHIPDDLCHVELVQDYPVCLMRRDHPALTQEWNLDTFLSYRHLQVAFGGLEHWLLDD
VLQLEGRQRDIAVNMTDFQSALTLCEHSDLILCAPSRYAFAVMKSFELQSLPSPIKLI
PGAYLLMWHKHFEHDLSHKWLRELIISQVLPSITPRV"
misc_feature 244221..245066
/locus_tag="Sbal_0214"
/note="DNA-binding transcriptional regulator YidZ;
Provisional; Region: PRK10216"
/db_xref="CDD:182312"
misc_feature <244221..244358
/locus_tag="Sbal_0214"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 244449..245072
/locus_tag="Sbal_0214"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulators that involved in the
catabolism of nitroaromatic/naphthalene compounds and that
of related regulators; contains the type 2 periplasmic
binding fold; Region: PBP2_Nitroaromatics_like; cd08417"
/db_xref="CDD:176109"
misc_feature order(244467..244469,244473..244478,244488..244490,
244689..244691,244800..244802,245001..245003)
/locus_tag="Sbal_0214"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:176109"
misc_feature order(244470..244472,244479..244484,244491..244496,
244503..244508,244512..244517,244524..244529,
244533..244547,244551..244553,244767..244769,
244851..244865,244872..244877,244884..244889,
244896..244898)
/locus_tag="Sbal_0214"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176109"
gene complement(245089..245970)
/locus_tag="Sbal_0215"
/db_xref="GeneID:4842819"
CDS complement(245089..245970)
/locus_tag="Sbal_0215"
/note="PFAM: Patatin;
KEGG: shn:Shewana3_3931 patatin"
/codon_start=1
/transl_table=11
/product="patatin"
/protein_id="YP_001048618.1"
/db_xref="GI:126172469"
/db_xref="InterPro:IPR002641"
/db_xref="GeneID:4842819"
/translation="MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFNYVIGVSAGAIY
PASYVSRQFGRNLQIQQQYLNDKRYMGLRHWLATGNYVNTDFTYRRMAYELLPFDFDT
FLNSHTEFKVGAFNCNTGKTDYFGMADFNDHDKLLDVLIASSSLPFMSKPSVINQHHY
LDGGIGEPIPLAQSRKDGYARQVVILTQDQHYQKTAMKMNWLARKAYKRYPAVAHALS
ERHRVYNQALTELDQAVTSDDAFVIRPALPLNLSRLDRNIDKVTAVYQQGLADGKTVL
PALTAWLAAPKEPKPEA"
misc_feature complement(245116..245970)
/locus_tag="Sbal_0215"
/note="Predicted esterase of the alpha-beta hydrolase
superfamily [General function prediction only]; Region:
COG4667"
/db_xref="CDD:34285"
misc_feature complement(245155..245955)
/locus_tag="Sbal_0215"
/note="Hypothetical patatin similar to yjju protein of
Escherichia coli; Region: Pat_hypo_Ecoli_yjju_like;
cd07208"
/db_xref="CDD:132847"
misc_feature complement(order(245485..245487,245854..245856,
245929..245931,245935..245940))
/locus_tag="Sbal_0215"
/note="active site"
/db_xref="CDD:132847"
misc_feature complement(245848..245862)
/locus_tag="Sbal_0215"
/note="nucleophile elbow; other site"
/db_xref="CDD:132847"
gene complement(246049..247062)
/locus_tag="Sbal_0216"
/db_xref="GeneID:4842607"
CDS complement(246049..247062)
/locus_tag="Sbal_0216"
/note="PFAM: regulatory protein, LysR; LysR,
substrate-binding;
KEGG: son:SO4524 transcriptional regulator, LysR family"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_001048619.1"
/db_xref="GI:126172470"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR002197"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:4842607"
/translation="MNKNMIKGMIVFAAIAEKGSMSAAAQQLNLSSSAVSQQVTKLEM
DMGISLFHRNTRNLTLTEAGSLFYENCRKVIAIVESTEQKLNNLKGIPSGELKIAAPI
GFGGGLLSEPFNYLLAAHPQISLNLLLQDGPIDIVNEGIDLAICIGPLSDSNLIARHL
ADWRMLLCASPDYLPMHKIFKHPAELAAFNRINHPCANSETLTHVRNKECFELTSQRI
TVNNMQALIQLTLDGLGFAALPEPEVHKYLESGQLVTLLPEWSLNTYSVYSVTSARDK
QPAKVKEALNTLSQYFSQANFNPAYHFKQCVQKDGTKGSVTNILPIKPKQASHHADVD
HAS"
misc_feature complement(246181..247047)
/locus_tag="Sbal_0216"
/note="transcriptional regulator; Provisional; Region:
PRK10632"
/db_xref="CDD:182601"
misc_feature complement(246871..247047)
/locus_tag="Sbal_0216"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(246217..246783)
/locus_tag="Sbal_0216"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulator CrgA and its related
homologs, contains the type 2 periplasmic binding domain;
Region: PBP2_CrgA_like; cd08422"
/db_xref="CDD:176114"
misc_feature complement(order(246262..246264,246343..246345,
246394..246396,246574..246576,246580..246582,
246622..246624,246739..246741,246751..246753))
/locus_tag="Sbal_0216"
/note="putative effector binding pocket; other site"
/db_xref="CDD:176114"
misc_feature complement(order(246367..246369,246376..246381,
246400..246414,246493..246495,246676..246696,
246700..246702,246712..246714,246721..246726,
246730..246735,246745..246750))
/locus_tag="Sbal_0216"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176114"
gene 247187..249187
/locus_tag="Sbal_0217"
/db_xref="GeneID:4845736"
CDS 247187..249187
/locus_tag="Sbal_0217"
/note="IrgA; binds ferric enterobactin; irgA gene
expression is repressed by Fur and induced by the
divergently transcribed upstream gene irgB; outer membrane
protein; involved in iron metabolism"
/codon_start=1
/transl_table=11
/product="enterobactin receptor protein"
/protein_id="YP_001048620.1"
/db_xref="GI:126172471"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR010917"
/db_xref="InterPro:IPR012910"
/db_xref="GeneID:4845736"
/translation="MLLSRKKYLAQVITALCLLPAVPVTNALADTAPDKEKMMERIVV
TASGFEQQIRDAPASISVITREDLDNRFYRDLTDAMLEVPGVVITGGADRQDISLRGM
GSQYTLILVDGKRQSSRETRTNSDGPGVEGAWTPPLAAIDRIEIVRGPMSSLYGSDAI
GGVINIITRKVPNEWQGEVRLDTTLQEKSTSGNVYQSNFFVNGGLIKDLLGMQLYGQY
TQREEDNIYGGYRGRDATNLTARFALTPNENHDIMLEVGVSNQELDSSLGKTVTPLAP
GEACGRRGCPQSSTTEYENSTISLSHTGRWDFGTSDSYIKHEVFDNKTRKMKITNTDV
QSSLITTLGQSHTATFGAAFNHQDLTDETGNQVSNLTDISRRQWSVFSEDEWRIVDNF
ALTMGLRLDDDENFGHHVSPRVYGVWGLTDSTTLKGGVSTGFRAPSLRQTVPDWGQVS
RGGNMYGNPDLQPETSVNYELGVYSDLTESITASAGVFYNEFKDKITRVACPATQCTD
GPNQFGSDPTTYVNIDDAVTQGIELSIDYRIRSNLSFTGNYTYTDSEQKTGAYKGSPL
NQLPKHLIQASFNYEPIDNLSTWLRVNYRGEESQPTTGPSSSSFIAPSYTLLDLGANY
QLNDSLKFSAGIYNAFDKDITQEEYGYLEDGRRYWLGMTYSF"
misc_feature 247199..249184
/locus_tag="Sbal_0217"
/note="enterobactin receptor protein; Provisional; Region:
PRK13483"
/db_xref="CDD:184080"
misc_feature 247361..249184
/locus_tag="Sbal_0217"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(247361..247390,247418..247447,247475..247492,
247511..247534,247598..247630,247664..247690)
/locus_tag="Sbal_0217"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(248141..248143,248222..248224)
/locus_tag="Sbal_0217"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene complement(249259..249519)
/locus_tag="Sbal_0218"
/db_xref="GeneID:4845856"
CDS complement(249259..249519)
/locus_tag="Sbal_0218"
/note="KEGG: shn:Shewana3_3927 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048621.1"
/db_xref="GI:126172472"
/db_xref="GeneID:4845856"
/translation="MGFNEQEKHALLALKGVGPTVIKRFEEIGISSLQQLAQHEVDDI
ANLVASMLRTTCWKNSPQARNAIGAAIELARAHPPAKNSHSY"
misc_feature complement(<249376..>249495)
/locus_tag="Sbal_0218"
/note="Sec63 Brl domain; Region: Sec63; pfam02889"
/db_xref="CDD:202451"
gene complement(249651..250988)
/locus_tag="Sbal_0219"
/db_xref="GeneID:4844803"
CDS complement(249651..250988)
/locus_tag="Sbal_0219"
/note="catalyzes the oxygen-independent formation of
protoporphyrinogen-IX from coproporphyrinogen-III"
/codon_start=1
/transl_table=11
/product="coproporphyrinogen III oxidase"
/protein_id="YP_001048622.1"
/db_xref="GI:126172473"
/db_xref="InterPro:IPR006638"
/db_xref="InterPro:IPR007197"
/db_xref="InterPro:IPR010723"
/db_xref="GeneID:4844803"
/translation="MSSVIQTLSGAIATPYQANITVPNWMLGSMERVMQYYVDKNLRL
DTLSAEMMPAPVEGKKYMLYAHIPFCHTLCSYCTFHRFMFKEDKARAYFISLRKEMEM
VKALGYDFESMYIGGGTTTVLEDELARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQ
LKGLVDRMSIGVQSFNDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFR
GQTDEVIQHDLDMASRLDPRQITTYPLMITHQTRKSVKGKLAAPQADMANQYRQILNS
LNGQYNQLSAWAFGKTDDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQE
RIAAGHMGVEQQKNYSKKDVMQYRFLLGMFSGRLSRKYFRDTFGVNLDTALFKEMTSM
KLIGAIKNDPRDPDNLIVTDNGKMMGLLMMKEFYSGMDNVRAQLRKPLKPCDM"
misc_feature complement(249654..250979)
/locus_tag="Sbal_0219"
/note="coproporphyrinogen III oxidase; Provisional;
Region: PRK08629"
/db_xref="CDD:181509"
misc_feature complement(<250332..250781)
/locus_tag="Sbal_0219"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature complement(order(250338..250340,250476..250478,
250542..250550,250629..250634,250638..250640,
250755..250763,250767..250769,250773..250775,
250779..250781))
/locus_tag="Sbal_0219"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene 251367..252278
/locus_tag="Sbal_0220"
/db_xref="GeneID:4845765"
CDS 251367..252278
/locus_tag="Sbal_0220"
/note="PFAM: Bile acid:sodium symporter;
KEGG: son:SO4519 sodium-dependent transporter"
/codon_start=1
/transl_table=11
/product="bile acid:sodium symporter"
/protein_id="YP_001048623.1"
/db_xref="GI:126172474"
/db_xref="InterPro:IPR002657"
/db_xref="GeneID:4845765"
/translation="MLVNVNRFFPLLALIGAVTAYLMPSWFTELKSAIVPLLVIIMLS
MGLTLDLQDFANAFKQKRAVLTGLILQFSVMPLSALLISQLLGLDRELTIGMVLVGSV
AGGTASNVVCYLAKGDVALSITMTALSTLAGVVLTPLIIKLLIGEMIDIPFVDMLLSL
VKIVLFPVSAGVIINHFFKSLVAKVAPALPLISILAIVMAITIIVALNTNQFDKVGPI
ILLAVFLHNGLGLALGYFCCRLLGFNHTVCKTISIEVGLQNSGLATALCIKFFSPISA
IPSAIFSIWHNLSGAILAGYWARESQD"
misc_feature 251385..252275
/locus_tag="Sbal_0220"
/note="Predicted Na+-dependent transporter [General
function prediction only]; Region: COG0385"
/db_xref="CDD:30734"
misc_feature 251472..252002
/locus_tag="Sbal_0220"
/note="Sodium Bile acid symporter family; Region: SBF;
pfam01758"
/db_xref="CDD:145094"
gene complement(252351..253742)
/locus_tag="Sbal_0221"
/db_xref="GeneID:4845731"
CDS complement(252351..253742)
/locus_tag="Sbal_0221"
/note="PFAM: Sel1 domain protein repeat-containing
protein;
KEGG: hch:HCH_06539 FOG: TPR repeat, SEL1 subfamily"
/codon_start=1
/transl_table=11
/product="Sel1 domain-containing protein"
/protein_id="YP_001048624.1"
/db_xref="GI:126172475"
/db_xref="InterPro:IPR006597"
/db_xref="GeneID:4845731"
/translation="MKIFTIATLLLLLTVSFAATAEKSTLEQLFEQQQYDAFLQQAQQ
QAAENNADALFLLGKAYHLGRGVTQDNATASQYYEQARALGSARASHNLGSMALDNDR
KTQAIPLLEEALARGLKLPTLYNLGRAHSPADPSSRFYLAKAIAAAQRAGSYFGQAFE
LQPDNLYLDNASREYLRAYLIAMQSVGSERESLDLPQLRQQAIKWLELGMAADNGTAW
TNYGALLLNENDYSGAKAAFLQGAKRQVAIANYHLGSMEERGLGAETDKVQALAYYEK
AALAGMEQAKAPAYELLKAQLEYEDDLTKLEQGVARFNALKQQDQYAPISLDSVINRL
AWGTFLAQQRQQTISLPTAAKTQLSLQACGLGYNQLHGSTYNIGENSHWRMAAYLTLA
DKIALPLEGRVDEHGCASLTIAMTDQLYRLLQQGAVFGLRFPNYTLPLALSRQENILQ
LTLMPVETPLPVN"
misc_feature complement(253485..253580)
/locus_tag="Sbal_0221"
/note="Sel1 repeat; Region: Sel1; cl02723"
/db_xref="CDD:207711"
misc_feature complement(<252867..253292)
/locus_tag="Sbal_0221"
/note="FOG: TPR repeat, SEL1 subfamily [General function
prediction only]; Region: COG0790"
/db_xref="CDD:31133"
misc_feature complement(252900..253004)
/locus_tag="Sbal_0221"
/note="Sel1-like repeats; Region: SEL1; smart00671"
/db_xref="CDD:197826"
gene complement(254292..255182)
/locus_tag="Sbal_0222"
/db_xref="GeneID:4845857"
CDS complement(254292..255182)
/locus_tag="Sbal_0222"
/note="KEGG: abo:ABO_1732 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048625.1"
/db_xref="GI:126172476"
/db_xref="GeneID:4845857"
/translation="MKTASQTMMSFTLASSALLASYAAQANPVETSREYKLLLDPSHF
NYATQSTTANSYLTDAKQAISNAISRNITGSWALTKARQVAFYDTPTSCQLKQLGYIF
RDRTSDDKSEVTLKFRSPDRFIADFEDLSSPDNQADTKLEADISTDINNGIRIVYSHS
TTTPNTRTLNDMADVNSHFSGFADAYGLSNNLTLAKVGGLTINEYVFEGSEIDLGSID
ASLELTLWYTSSPSASQQPVIAEVSFKYKDPNSNYTAKVVQRAKLAFDAMAQLSAWNS
TSSLTKTAFIYAAAPNFCSQ"
gene complement(255315..256856)
/locus_tag="Sbal_0223"
/db_xref="GeneID:4844071"
CDS complement(255315..256856)
/locus_tag="Sbal_0223"
/note="KEGG: abo:ABO_1733 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048626.1"
/db_xref="GI:126172477"
/db_xref="InterPro:IPR000437"
/db_xref="InterPro:IPR002048"
/db_xref="GeneID:4844071"
/translation="MKNVLVTSGLCLSVLLLSACNSDDKDINSLTTQTTLVGGDSHCW
MGGTRTDSGLDSNDNGKLDSNEVVDSSYACNTDLFTDKAVHLPFTVLRDDLDNGAMPG
TKFEIRNGGYGSDAAPNPNNPIQFYALTDRGPNADYSGSLGKGKMFPTPDYTPRIGLF
ELQTNGTITKIKDILFKRPDGSLITGLPNSSSLGGTGEIPYDAAGEVIRQDMSQPYNA
QTNPIKLDDYGLDSEGLAAMDDGSFWVSDEYGPHIVHYSAEGVEIARINPFADDARNL
YSLPAEFAHRRANRGMEGLTITPDQSTLVGIMQSTISNPDKSVNNNTLTRIVTINLAT
GAIGQYLYQQEIAQNSNSAIVALSNSQFLVLERDAKFFNIDTDVMKHVYKIDISGATD
LETVTAQADIAQDAALGLTIKGKTLEQVALSDGWEVLAANGIIPATKSLVLDMAAKTQ
YPHDKMEGLWLIDNKRLGVLNDDDFATWSNNNTLEQKYLDSAQSDIDGNTLYIVDDLP
LSADK"
misc_feature complement(255432..>256187)
/locus_tag="Sbal_0223"
/note="Esterase-like activity of phytase; Region:
Phytase-like; pfam13449"
/db_xref="CDD:205627"
gene complement(257317..257805)
/locus_tag="Sbal_0224"
/db_xref="GeneID:4845608"
CDS complement(257317..257805)
/locus_tag="Sbal_0224"
/note="CycJ; periplasmic heme chaperone that binds heme
transiently via a histidine residue and delivers it to
newly synthesized and exported c-type cytochromes;
requires the ATP hydrolysis activity of the CcmA protein
in order to transfer the heme to the apocytochrome; part
of the cytochrome c maturation system; periplasmic protein
anchored to the inner membrane"
/codon_start=1
/transl_table=11
/product="cytochrome c-type biogenesis protein CcmE"
/protein_id="YP_001048627.1"
/db_xref="GI:126172478"
/db_xref="InterPro:IPR004329"
/db_xref="GeneID:4845608"
/translation="MNPRRKKRLTLAVALIGGVAAITSLLLYALNSNLNLFYTPSEIV
HGKTDTGVKPEIGQRIRVGGMVTVGSMVRDPKSLHVQFAVHDSLGGEVLVTYDDLLPD
LFREGQGIVAQGVLSADGKLEATEVLAKHDENYMPPEVAEAMGQKHEKLDYSQQKAPD
TK"
misc_feature complement(257335..257805)
/locus_tag="Sbal_0224"
/note="cytochrome c-type biogenesis protein CcmE;
Reviewed; Region: PRK13165"
/db_xref="CDD:183874"
gene complement(257802..258002)
/locus_tag="Sbal_0225"
/db_xref="GeneID:4845148"
CDS complement(257802..258002)
/locus_tag="Sbal_0225"
/note="PFAM: Heme exporter protein D (CcmD);
KEGG: shn:Shewana3_0228 heme exporter protein D (CcmD)"
/codon_start=1
/transl_table=11
/product="Heme exporter protein CcmD"
/protein_id="YP_001048628.1"
/db_xref="GI:126172479"
/db_xref="InterPro:IPR007078"
/db_xref="GeneID:4845148"
/translation="MQFDSISDFFNMGGYAFYVWLSYGVTFCCLSTLIITSARQKRKV
LIEIAKKMDREERLKETRSTKS"
misc_feature complement(257817..258002)
/locus_tag="Sbal_0225"
/note="Heme exporter protein D [Intracellular trafficking
and secretion]; Region: CcmD; COG3114"
/db_xref="CDD:32928"
gene complement(258002..258748)
/locus_tag="Sbal_0226"
/db_xref="GeneID:4845509"
CDS complement(258002..258748)
/locus_tag="Sbal_0226"
/note="TIGRFAM: heme exporter protein CcmC;
PFAM: cytochrome c assembly protein;
KEGG: son:SO0261 heme exporter protein CcmC"
/codon_start=1
/transl_table=11
/product="heme exporter protein CcmC"
/protein_id="YP_001048629.1"
/db_xref="GI:126172480"
/db_xref="InterPro:IPR002541"
/db_xref="InterPro:IPR003557"
/db_xref="GeneID:4845509"
/translation="MWKWLHPYADPERAYKLSGTLFPWFAILAGLFIAVGTTWGLAFA
PTDYQQGDSYRIIFIHVPAASMSMAAYMGMATAAFIGLVWQIKLADWAAASIAPIGAV
ITFIALFTGAAWGKPMWGAWWVWDARLTSELVLLFLYLGVISLYASFEDKVLAARAAG
ILAIVGVINIPIIKYSVEWWSSLHQPSTIRITEKSTMSTEMLYPLLINMLGFGLMIGA
ITIVRFRAEILARNGMRPWVRELAKAEEVK"
misc_feature complement(258065..258616)
/locus_tag="Sbal_0226"
/note="heme exporter protein CcmC; Region: ccmC;
TIGR01191"
/db_xref="CDD:162244"
gene complement(258750..259436)
/locus_tag="Sbal_0227"
/db_xref="GeneID:4845574"
CDS complement(258750..259436)
/locus_tag="Sbal_0227"
/note="TIGRFAM: heme exporter protein CcmB;
PFAM: cytochrome c-type biogenesis protein CcmB;
KEGG: son:SO0262 heme exporter protein CcmB"
/codon_start=1
/transl_table=11
/product="heme exporter protein CcmB"
/protein_id="YP_001048630.1"
/db_xref="GI:126172481"
/db_xref="InterPro:IPR003544"
/db_xref="GeneID:4845574"
/translation="MKRGISFTQAFFTLLQRDLKIAIRHRGDIFNPLLFFIMVVTLFP
LGIGPEPQMLARVAPGIIWVAALLASMLSLERLFKADFSDGSLEQMLLSPQPLAILVL
AKVLAHWILTGVPLIIIAPLLAVLLNLDGNSYGALISTLALGTPVLSLLGAIGVALTV
GLRKGGVLLSLLILPLYIPVLIFATSAIDAAGMNLPYDGQLAIIGAMLVGSLTLAPFA
IGASLRVSTN"
misc_feature complement(258762..259406)
/locus_tag="Sbal_0227"
/note="CcmB protein; Region: CcmB; pfam03379"
/db_xref="CDD:202609"
gene complement(259448..260098)
/locus_tag="Sbal_0228"
/db_xref="GeneID:4845683"
CDS complement(259448..260098)
/locus_tag="Sbal_0228"
/note="ATP-binding protein; required for proper cytochrome
c maturation"
/codon_start=1
/transl_table=11
/product="cytochrome c biogenesis protein CcmA"
/protein_id="YP_001048631.1"
/db_xref="GI:126172482"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005895"
/db_xref="GeneID:4845683"
/translation="MTNITKETTLVSASKLTCIREERILFDELSFDINAGDIVQIEGP
NGAGKTSLLRILAGLSRPYAGQTFYRNEDINRCRDEYNEDLLYLGHLAGVKCELTAEE
NLNFNLRISGYDDFDTSAILAKVNLTGFEEALAGHLSAGQHRRTALSRLWHSNCKIWI
LDEPFTAIDKKGVEELEQLFIQHADNGGCVILTTHQDMGIIKDDRLRKIRLDYRFI"
misc_feature complement(259460..260071)
/locus_tag="Sbal_0228"
/note="cytochrome c biogenesis protein CcmA; Provisional;
Region: PRK13538"
/db_xref="CDD:184125"
misc_feature complement(259466..260062)
/locus_tag="Sbal_0228"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
misc_feature complement(259949..259972)
/locus_tag="Sbal_0228"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(order(259514..259516,259610..259615,
259829..259831,259946..259954,259958..259963))
/locus_tag="Sbal_0228"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature complement(259829..259840)
/locus_tag="Sbal_0228"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature complement(259658..259687)
/locus_tag="Sbal_0228"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature complement(259610..259627)
/locus_tag="Sbal_0228"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature complement(259592..259603)
/locus_tag="Sbal_0228"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(259508..259528)
/locus_tag="Sbal_0228"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene 260417..260716
/locus_tag="Sbal_0229"
/db_xref="GeneID:4842228"
CDS 260417..260716
/locus_tag="Sbal_0229"
/note="PFAM: cytochrome c, class I;
KEGG: shn:Shewana3_0232 cytochrome c, class I"
/codon_start=1
/transl_table=11
/product="cytochrome c class I"
/protein_id="YP_001048632.1"
/db_xref="GI:126172483"
/db_xref="InterPro:IPR002323"
/db_xref="InterPro:IPR003088"
/db_xref="InterPro:IPR009056"
/db_xref="GeneID:4842228"
/translation="MKKLLAMTAVAALTMSVNVSAQEAEAIFNKACTVCHSMGVAGAP
KVHNAAEWEPRLAKGIDALLHSVKTGLNAMPPGGMCTDCTDEDYKAAIEFMSKAQ"
misc_feature <260477..260713
/locus_tag="Sbal_0229"
/note="Cytochrome c5 [Energy production and conversion];
Region: CycB; COG3245"
/db_xref="CDD:33056"
gene complement(260780..262033)
/locus_tag="Sbal_0230"
/db_xref="GeneID:4844471"
CDS complement(260780..262033)
/locus_tag="Sbal_0230"
/note="SMART: Tetratricopeptide domain protein;
KEGG: she:Shewmr4_0233 TPR repeat-containing protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048633.1"
/db_xref="GI:126172484"
/db_xref="InterPro:IPR013026"
/db_xref="GeneID:4844471"
/translation="MTTFWIFIALVMLVGLMLIWIPHFRQQKLLKTEEAGVRKQTNLE
LFNERLGVLEKELSEELLDQAEFDALKKELEISLLQDIKEASDDSLVNQIKPKTILWP
SIMSVCLIVISGYLYQHLGAFENIETAQQPANPHAGMDTAQIMAQRVQMMEAQVKAEP
ENSQVWFSLGHAYVSANQYDKGIAAFDKVMDLVGKHAELLGPKATAMYYKAGQQMTPQ
IKAIIDESLAMDAQDPSTLLLVGMDAFFTADYKQAIASWQTILDSDRADVDRAALMNA
IETANLRMQSETTGMPNDDTHKQVKASAAKSVNVTISISAELAAKASPEDTIFIFARA
TEGPKVPLAATKVSAKSFPVTVTLDDSSGMGGDKKLSDATNVEVIAVLSKHGNIKPQA
GDLQGKISTVAVGDTANLVLDTQVQ"
misc_feature complement(261665..262027)
/locus_tag="Sbal_0230"
/note="cytochrome c-type biogenesis protein CcmI; Region:
cytochro_ccmI; TIGR03142"
/db_xref="CDD:163153"
misc_feature complement(261203..262024)
/locus_tag="Sbal_0230"
/note="Cytochrome c biogenesis factor [Posttranslational
modification, protein turnover, chaperones]; Region:
COG4235"
/db_xref="CDD:33959"
misc_feature complement(261239..261544)
/locus_tag="Sbal_0230"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature complement(order(261293..261298,261305..261310,
261317..261322,261404..261409,261419..261424,
261428..261433,261518..261523,261530..261535,
261539..261544))
/locus_tag="Sbal_0230"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature complement(order(261254..261256,261263..261265,
261275..261277,261311..261313,261356..261358,
261365..261367,261377..261379,261422..261424,
261467..261469,261476..261478,261488..261490,
261524..261526))
/locus_tag="Sbal_0230"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene 262434..264413
/locus_tag="Sbal_0231"
/db_xref="GeneID:4845076"
CDS 262434..264413
/locus_tag="Sbal_0231"
/note="TIGRFAM: cytochrome c-type biogenesis protein CcmF;
PFAM: cytochrome c assembly protein;
KEGG: shm:Shewmr7_0229 cytochrome c-type biogenesis
protein CcmF"
/codon_start=1
/transl_table=11
/product="cytochrome c-type biogenesis protein CcmF"
/protein_id="YP_001048634.1"
/db_xref="GI:126172485"
/db_xref="InterPro:IPR002541"
/db_xref="InterPro:IPR003567"
/db_xref="InterPro:IPR003568"
/db_xref="InterPro:IPR003570"
/db_xref="GeneID:4845076"
/translation="MIPELGHFALIIGVAFAFLLISVPLIGVARKDQYLVRYAWPLTY
GMFFFITVSVVVLAYSFAVDDFSVAYVAHHSNSQLPIFFKISAVWGGHEGSLLFWVFA
LSTWAAAVALFSKGLEEVFTARVLAVLALIVIGFSLFMLLTSSPFERLFPIPAEGRDL
NPMLQDVGLIFHPPMLYLGYVGFSVSFAFAIAALMSGRLDSAWARWTRPWTLAAWIFL
TGGIALGSWWAYYELGWGGWWFWDPVENASFMPWLVGTALVHSLIVTEKRGAFRNWTV
LLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGLAIGGSLTLFAFRAS
EMSSPARFELKSKETMLLVCNVLLTVAAGTVLLGTLYPLLIDALGMGKISVGPPYFNA
VFVPIVLVLFGFMGIGPIIRWKKSKAGELRRQLLIPAMVAAAIGIVTPFIVDGVFNTW
VAFGIAAASWIILATARAAYNMVKSKEGDISISRMGRSQLGMIFAHLGIAVSVIGATM
VSNYSIEKSVRMGPGISQELAGYTFKYLETKNVVGPNYTAVQGQIEVYKGDELLTLLK
PDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPITSTEFAVRLNYKPFVRWLWFGAIF
MMIGGFFAASDKRYRVKVTAAVAPSAEKAKLATAQ"
misc_feature 262434..264290
/locus_tag="Sbal_0231"
/note="Cytochrome C assembly protein; Region:
Cytochrom_C_asm; cl00504"
/db_xref="CDD:212230"
gene 264425..264979
/locus_tag="Sbal_0232"
/db_xref="GeneID:4842057"
CDS 264425..264979
/locus_tag="Sbal_0232"
/note="TIGRFAM: periplasmic protein thiol--disulphide
oxidoreductase DsbE;
PFAM: alkyl hydroperoxide reductase/ Thiol specific
antioxidant/ Mal allergen; Redoxin domain protein;
KEGG: son:SO0267 thiol:disulfide interchange protein DsbE"
/codon_start=1
/transl_table=11
/product="periplasmic protein thiol--disulfide
oxidoreductase DsbE"
/protein_id="YP_001048635.1"
/db_xref="GI:126172486"
/db_xref="InterPro:IPR000866"
/db_xref="InterPro:IPR004799"
/db_xref="InterPro:IPR006662"
/db_xref="InterPro:IPR011594"
/db_xref="InterPro:IPR013740"
/db_xref="GeneID:4842057"
/translation="MKKLVLFIPLVIFLAMGVFLYKGLFLNPQQLDSALEGKPIPAFQ
LERLETPAEIITNEQLKGKVSLLNVWATWCPSCKYEHPFLVMLKRKNLLPIYGINYRD
ERAPALEELKRQGDPYNVNIYDKDGRLGLDLGVYGAPESFVVDHNGIIRFRYAGPIDL
RVWSETLYPMIQQLQAEAAKDGAS"
misc_feature 264425..264964
/locus_tag="Sbal_0232"
/note="thiol:disulfide interchange protein DsbE;
Provisional; Region: PRK15412"
/db_xref="CDD:185310"
misc_feature 264536..264913
/locus_tag="Sbal_0232"
/note="TlpA-like family, DsbE (also known as CcmG and
CycY) subfamily; DsbE is a membrane-anchored, periplasmic
TRX-like reductase containing a CXXC motif that
specifically donates reducing equivalents to apocytochrome
c via CcmH, another cytochrome c...; Region:
TlpA_like_DsbE; cd03010"
/db_xref="CDD:48559"
misc_feature order(264644..264646,264653..264655)
/locus_tag="Sbal_0232"
/note="catalytic residues [active]"
/db_xref="CDD:48559"
misc_feature 264728..264796
/locus_tag="Sbal_0232"
/note="central insert; other site"
/db_xref="CDD:48559"
gene 264976..265455
/locus_tag="Sbal_0233"
/db_xref="GeneID:4843442"
CDS 264976..265455
/locus_tag="Sbal_0233"
/note="PFAM: cytochrome C biogenesis protein;
KEGG: shn:Shewana3_0236 cytochrome c biogenesis protein"
/codon_start=1
/transl_table=11
/product="cytochrome C biogenesis protein"
/protein_id="YP_001048636.1"
/db_xref="GI:126172487"
/db_xref="InterPro:IPR005616"
/db_xref="GeneID:4843442"
/translation="MRTLTKIIGGLVLLFSMTTAVMATPVDTYEFKTPENQKRGLSLA
HELRCPQCQNQNLIDSNSPVARDLRLEVFKMVDEGKGDDEIIEFMTSRYGEFVLYNPK
METKTYILWLGPIGLLLMGLVIGFIFIRKQRISGNVPNEISEEDQRELDTLLKRNTK"
misc_feature 265006..265440
/locus_tag="Sbal_0233"
/note="Cytochrome C biogenesis protein; Region: CcmH;
pfam03918"
/db_xref="CDD:190794"
gene 265452..266039
/locus_tag="Sbal_0234"
/db_xref="GeneID:4844143"
CDS 265452..266039
/locus_tag="Sbal_0234"
/note="PFAM: alkyl hydroperoxide reductase/ Thiol specific
antioxidant/ Mal allergen; Redoxin domain protein;
KEGG: shn:Shewana3_0237 redoxin domain protein"
/codon_start=1
/transl_table=11
/product="alkyl hydroperoxide reductase"
/protein_id="YP_001048637.1"
/db_xref="GI:126172488"
/db_xref="InterPro:IPR000866"
/db_xref="InterPro:IPR006662"
/db_xref="InterPro:IPR011594"
/db_xref="InterPro:IPR013740"
/db_xref="GeneID:4844143"
/translation="MKHKVIKALLLSSLFSLLAGGVAHAYPGMQQATKPMESTVDLIN
VLPKTFPIEPVAFNDVDGKAIDFSQFKGKIIMVNMWATWCPPCVRELPAIERLATKFK
AEDFVLLPISIDAEGKQQVQPFLNSLGMPNFNSYYDQSQSLGDVFPLDTIPATFILDQ
QGQLIAFVRSYVDWDDAKAVSLIQGFIDKGSKKPN"
misc_feature 265611..265955
/locus_tag="Sbal_0234"
/note="TlpA-like family; composed of TlpA, ResA, DsbE and
similar proteins. TlpA, ResA and DsbE are bacterial
protein disulfide reductases with important roles in
cytochrome maturation. They are membrane-anchored proteins
with a soluble TRX domain containing a...; Region:
TlpA_like_family; cd02966"
/db_xref="CDD:48515"
misc_feature order(265701..265703,265710..265712)
/locus_tag="Sbal_0234"
/note="catalytic residues [active]"
/db_xref="CDD:48515"
gene 266577..268113
/locus_tag="Sbal_R0004"
/db_xref="GeneID:4845651"
rRNA 266577..268113
/locus_tag="Sbal_R0004"
/product="16S ribosomal RNA"
/db_xref="GeneID:4845651"
gene 268482..271384
/locus_tag="Sbal_R0005"
/db_xref="GeneID:4842354"
rRNA 268482..271384
/locus_tag="Sbal_R0005"
/product="23S ribosomal RNA"
/db_xref="GeneID:4842354"
gene 271525..271639
/locus_tag="Sbal_R0006"
/db_xref="GeneID:4842355"
rRNA 271525..271639
/locus_tag="Sbal_R0006"
/product="5S ribosomal RNA"
/db_xref="GeneID:4842355"
gene 271675..271751
/locus_tag="Sbal_R0007"
/note="tRNA-Asp1"
/db_xref="GeneID:4842356"
tRNA 271675..271751
/locus_tag="Sbal_R0007"
/product="tRNA-Asp"
/db_xref="GeneID:4842356"
gene 272263..272775
/locus_tag="Sbal_0235"
/db_xref="GeneID:4843443"
CDS 272263..272775
/locus_tag="Sbal_0235"
/note="KEGG: shm:Shewmr7_3783 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048638.1"
/db_xref="GI:126172489"
/db_xref="GeneID:4843443"
/translation="MLYDLTVVQFSKMLKNLSVILEKGECFANLKKVDMAVLLNSRLA
PDQFNLIRQVQIACDTAKIGVARLTDNLDTVPKHDDSETTLADLQARISSVLDYLATF
KADDFANAATIHVSQPRWEGKYLTGYEFAIEHAIPNIYFHVTTAYAILRHNGVEIGKK
DYLGAMPYKS"
misc_feature 272266..272754
/locus_tag="Sbal_0235"
/note="Domain of unknown function (DUF1993); Region:
DUF1993; pfam09351"
/db_xref="CDD:204207"
gene 273187..273384
/locus_tag="Sbal_0236"
/db_xref="GeneID:4844124"
CDS 273187..273384
/locus_tag="Sbal_0236"
/note="KEGG: son:SO4490 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048639.1"
/db_xref="GI:126172490"
/db_xref="GeneID:4844124"
/translation="MSIESQAVESPTDATTTKSKKAKKAAITSGLRLKDKLTQDTRRR
IEILHEQRQLSNRFGVDIEID"
gene complement(273490..273957)
/locus_tag="Sbal_0237"
/db_xref="GeneID:4843465"
CDS complement(273490..273957)
/locus_tag="Sbal_0237"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: son:SO4489 acetyltransferase, GNAT family"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_001048640.1"
/db_xref="GI:126172491"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:4843465"
/translation="MKVIDLKSAPQHIPQLAQWHHQEWAHLSSADATVTTLIEQMSEY
LSDAAIPKMFICEEANQVMGSSSLTAADMDTRTDLSPWLANVYVNAHYRNKGLGKLLV
NAVVDYAKALGLQKIYLFTADKADFYQTLGWSKISREDYMGEMVTIMEYEFKK"
misc_feature complement(273559..273921)
/locus_tag="Sbal_0237"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_10; pfam13673"
/db_xref="CDD:205850"
misc_feature complement(273601..273801)
/locus_tag="Sbal_0237"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature complement(order(273661..273666,273694..273702))
/locus_tag="Sbal_0237"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(274088..275404)
/locus_tag="Sbal_0238"
/db_xref="GeneID:4843085"
CDS complement(274088..275404)
/locus_tag="Sbal_0238"
/note="PFAM: ATP-binding region, ATPase domain protein
domain protein;
KEGG: son:SO4488 sensor histidine kinase"
/codon_start=1
/transl_table=11
/product="integral membrane sensor signal transduction
histidine kinase"
/protein_id="YP_001048641.1"
/db_xref="GI:126172492"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:4843085"
/translation="MYSLKGYLTRNLLITLTFAMVLLLYFLYQGIQILTQDFVASRLQ
HDADSLISALNNHPDGTWAITTDRLPNVYHRVNSGHYFAIQIGEQTLCSRSLFDHNVN
MPKLTAGEHHQATDFVGKEHWLMFSQAVIKDDQLVTLWVTEDISELEQTQVQFLAFAS
AAVLLTIVILLMSQYQLLKRGFKPLEQMPEAIRQMRTQGQEINPDQMPSEIIPLIEEI
DRLVNQLGQRVQRSRNALGNLAHEMKRPLQGLQSYLESLPPEQRSEGSKVLANLHHII
ERELKRTKIVGMSTPGRYTVLDDDLAPLIQVMQRIYPDRIINSHYASGLVMPFDRDDL
LELLGNLLDNACKHSRKNIEIRIVHQTAPTAGYGIIVSDDGEGVSDAALSIIIERGIR
LDESIQGHGLGLSICKDIVDSYQGELSFSHAQQGGLEASVFLPIPS"
misc_feature complement(274091..274990)
/locus_tag="Sbal_0238"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature complement(<274559..274708)
/locus_tag="Sbal_0238"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cl00080"
/db_xref="CDD:206823"
misc_feature complement(order(274568..274570,274577..274579,
274589..274591,274646..274648,274655..274657,
274667..274669,274676..274678,274688..274690))
/locus_tag="Sbal_0238"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(274682..274684)
/locus_tag="Sbal_0238"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(274103..274375)
/locus_tag="Sbal_0238"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(274115..274117,274121..274126,
274139..274141,274145..274147,274193..274204,
274271..274276,274280..274282,274286..274288,
274292..274294,274364..274366,274373..274375))
/locus_tag="Sbal_0238"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(274373..274375)
/locus_tag="Sbal_0238"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(274196..274198,274202..274204,
274274..274276,274280..274282))
/locus_tag="Sbal_0238"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(275410..276069)
/locus_tag="Sbal_0239"
/db_xref="GeneID:4844784"
CDS complement(275410..276069)
/locus_tag="Sbal_0239"
/note="PFAM: response regulator receiver; transcriptional
regulator domain protein;
KEGG: shn:Shewana3_0241 two component transcriptional
regulator, winged helix family"
/codon_start=1
/transl_table=11
/product="two component transcriptional regulator"
/protein_id="YP_001048642.1"
/db_xref="GI:126172493"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:4844784"
/translation="MRLLLIEDDTDLVARLIPALNKAGYTVEHADNGIDGAFLGEEEN
FEAVILDLGLPGKPGLQVLGQWRQKGLAMPVLILTARDAWHERVDGLKAGADDYLGKP
FHIEELLARLEVLIRRHFGRADNVLQHAGVSLDVDKQAVTNVDGEVIELTKIEYRLLH
YLMVNPSKIVSKSELSERIYEEDQIKDSNVIEVYVNRLRQRLGKDYIETRRGQGYRLK
E"
misc_feature complement(275419..276069)
/locus_tag="Sbal_0239"
/note="DNA-binding transcriptional regulator BasR;
Provisional; Region: PRK10643"
/db_xref="CDD:182612"
misc_feature complement(275722..276060)
/locus_tag="Sbal_0239"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(275764..275769,275776..275778,
275833..275835,275893..275895,275917..275919,
276046..276051))
/locus_tag="Sbal_0239"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(275917..275919)
/locus_tag="Sbal_0239"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(275893..275901,275905..275910))
/locus_tag="Sbal_0239"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(275761..275769)
/locus_tag="Sbal_0239"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(275419..275691)
/locus_tag="Sbal_0239"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature complement(order(275428..275430,275443..275445,
275464..275469,275491..275493,275500..275502,
275554..275559,275614..275616))
/locus_tag="Sbal_0239"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene complement(276069..276335)
/locus_tag="Sbal_0240"
/db_xref="GeneID:4841500"
CDS complement(276069..276335)
/locus_tag="Sbal_0240"
/note="PFAM: Propeptide, PepSY amd peptidase M4;
KEGG: shn:Shewana3_0242 propeptide, PepSY amd peptidase
M4"
/codon_start=1
/transl_table=11
/product="peptidase"
/protein_id="YP_001048643.1"
/db_xref="GI:126172494"
/db_xref="InterPro:IPR005075"
/db_xref="GeneID:4841500"
/translation="MISSPSCDAHDDDLSNKVVEWVKEGKVLPFDTIMQRYESRLKGR
LLDLEVEQKHGRIIYELEILRDDGIVYEIKIDAKTGEWLKEKVD"
misc_feature complement(276072..>276269)
/locus_tag="Sbal_0240"
/note="Predicted membrane protein [Function unknown];
Region: COG3212"
/db_xref="CDD:33025"
misc_feature complement(276078..276254)
/locus_tag="Sbal_0240"
/note="Peptidase propeptide and YPEB domain; Region:
PepSY; pfam03413"
/db_xref="CDD:202622"
gene complement(276328..276891)
/locus_tag="Sbal_0241"
/db_xref="GeneID:4844544"
CDS complement(276328..276891)
/locus_tag="Sbal_0241"
/note="KEGG: shn:Shewana3_0243 diheme cytochrome c"
/codon_start=1
/transl_table=11
/product="diheme cytochrome c"
/protein_id="YP_001048644.1"
/db_xref="GI:126172495"
/db_xref="GeneID:4844544"
/translation="MTKQAHPISWFLGSSLTAAALAIGVIGVSLTLTGTGYADDGRGL
SRAIPQNAEYTAECGSCHMAYPANLLPADKWRAITANLENHFGDNASLDPQVTARIEE
YLVQHAAQNGKVMKNSTPLLAGAGPQKITEQAFFIRKHDEIPRRMVQDNPKVGSFSQC
SNCHNLAEKGIFDEDTVNIPGFGRWDD"
misc_feature complement(276376..276732)
/locus_tag="Sbal_0241"
/note="Dihaem cytochrome c; Region: DHC; pfam09626"
/db_xref="CDD:204275"
gene complement(276981..277427)
/locus_tag="Sbal_0242"
/db_xref="GeneID:4845381"
CDS complement(276981..277427)
/locus_tag="Sbal_0242"
/note="PFAM: cytochrome c, monohaem;
KEGG: shn:Shewana3_0244 cytochrome c-type protein Shp"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048645.1"
/db_xref="GI:126172496"
/db_xref="InterPro:IPR009056"
/db_xref="GeneID:4845381"
/translation="MNRLTRHTNKSRLAIVAISTLLLTSLSVSAANSKVQSLPLSAER
IGTQLQSYQAQGAGPFTAAAGQKLWLQDMDGRSCASCHTAKVTDMGMHQNTRKSIDPM
APSITADRLTDSAKIEKWFTRNCNWTFKRDCTPQEKGDALLWLSLQ"
misc_feature complement(276993..277274)
/locus_tag="Sbal_0242"
/note="Domain of unknown function (DUF1924); Region:
DUF1924; pfam09086"
/db_xref="CDD:204128"
gene complement(277481..278068)
/locus_tag="Sbal_0243"
/db_xref="GeneID:4841994"
CDS complement(277481..278068)
/locus_tag="Sbal_0243"
/note="PFAM: cytochrome B561;
KEGG: she:Shewmr4_0244 cytochrome b561"
/codon_start=1
/transl_table=11
/product="cytochrome B561"
/protein_id="YP_001048646.1"
/db_xref="GI:126172497"
/db_xref="InterPro:IPR000516"
/db_xref="InterPro:IPR011577"
/db_xref="GeneID:4841994"
/translation="MSSNTLQTIKVWDLLIRIFHWSLVGFFTLAYLTEGEDEWMTIHS
YAGYSILILLVFRLLWGVIGTHNARFSNFITRPKEVLVYLKGLITGKAKDYIGHNPAG
AMMIVALIASIAITGFSGMALYATDGHGPLATSFFATWPEGAIKEVHEFFANFTVFLV
VIHVGGVIVSSLLHKENLVRAMVTGKKQRPVEQED"
misc_feature complement(277502..278041)
/locus_tag="Sbal_0243"
/note="Cytochrome b (N-terminus)/b6/petB: Cytochrome b is
a subunit of cytochrome bc1, an 11-subunit mitochondrial
respiratory enzyme. Cytochrome b spans the mitochondrial
membrane with 8 transmembrane helices (A-H) in eukaryotes.
In plants and cyanobacteria; Region: Cytochrome_b_N;
cl00859"
/db_xref="CDD:207221"
gene 278289..278744
/locus_tag="Sbal_0244"
/db_xref="GeneID:4841699"
CDS 278289..278744
/locus_tag="Sbal_0244"
/note="KEGG: shn:Shewana3_0246 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048647.1"
/db_xref="GI:126172498"
/db_xref="GeneID:4841699"
/translation="MSTAVIRAFISRNPSRKSFFIYAVLLFLTEVLIALYAPAGFIRG
FVGDVLVVILLFCMVRAVVSPVEKAAAKNTGDGIKRLFQTPWLAFAVLLFAFAIEFGQ
YWGLVDKLGLGGNRLARIVIGSHFDPLDLVAYFVGYLILLGCYWKSRQP"
misc_feature 278406..278705
/locus_tag="Sbal_0244"
/note="Protein of unknown function (DUF2809); Region:
DUF2809; pfam10990"
/db_xref="CDD:204573"
gene 278812..279324
/locus_tag="Sbal_0245"
/db_xref="GeneID:4843310"
CDS 278812..279324
/locus_tag="Sbal_0245"
/note="KEGG: son:SO4481 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048648.1"
/db_xref="GI:126172499"
/db_xref="GeneID:4843310"
/translation="MQPITAFSLLTARTDGLELNPLKMPLYFNGQHTHTFIAGLVIEG
QYRCVLPNKTSGYLVITSFDCPFEESTEFSLLDEAFKLIATTSLAQMYDSFLLHSHWP
IADNRLRLHYYGQFVLDLVISAGSSWLTARPKLKLIEVVNPQSDPQTAAAMAELAQRL
AAIEKSLMWD"
gene complement(279310..280233)
/locus_tag="Sbal_0246"
/db_xref="GeneID:4843311"
CDS complement(279310..280233)
/locus_tag="Sbal_0246"
/note="PFAM: regulatory protein, LysR; LysR,
substrate-binding;
KEGG: shn:Shewana3_0248 transcriptional regulator, LysR
family"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_001048649.1"
/db_xref="GI:126172500"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:4843311"
/translation="MQDRLQAMQIFMRVAELQSFTQASASLGLSKTHVSNVVAQFETF
LGARLLQRTTRTVRLTQDGQSCYERCKSLLAEFQELESLFQLQAEQVSGRLRVDMSTG
IARNLVLPKLAEFIEQYPHIELELSSTDRKVDVIAEGFDCVIRVGSVQQEGLIAKKMG
HFKMLNCVSPAYIAKYGKPESLEDLTLHNHKLVHYVSQLGGTDSGFEYQDPHTHQANL
TIQLPKLITVNNADAYSSACLAGLGIIQVPSIGVAKYLHTGELVEILQNYPAPPMPVS
LLYPHRRHLSKRLQVFMAWLNQQMTPFLVPH"
misc_feature complement(279340..280227)
/locus_tag="Sbal_0246"
/note="transcriptional regulator; Provisional; Region:
PRK10632"
/db_xref="CDD:182601"
misc_feature complement(<280093..280221)
/locus_tag="Sbal_0246"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(279346..279957)
/locus_tag="Sbal_0246"
/note="The C-terminal substrate binding domain of an
uncharacterized LysR-type transcriptional regulator
CrgA-like, contains the type 2 periplasmic binding fold;
Region: PBP2_CrgA_like_3; cd08472"
/db_xref="CDD:176161"
misc_feature complement(order(279409..279411,279490..279492,
279541..279543,279748..279750,279754..279756,
279796..279798,279913..279915,279925..279927))
/locus_tag="Sbal_0246"
/note="putative effector binding pocket; other site"
/db_xref="CDD:176161"
misc_feature complement(order(279514..279516,279523..279528,
279547..279561,279661..279663,279850..279870,
279874..279876,279886..279888,279895..279900,
279904..279909,279919..279924))
/locus_tag="Sbal_0246"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176161"
gene 280372..281133
/locus_tag="Sbal_0247"
/db_xref="GeneID:4845048"
CDS 280372..281133
/locus_tag="Sbal_0247"
/note="PFAM: short-chain dehydrogenase/reductase SDR;
KEGG: shm:Shewmr7_3773 short-chain dehydrogenase/reductase
SDR"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_001048650.1"
/db_xref="GI:126172501"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="GeneID:4845048"
/translation="MNTTPIALITGASRGLGKNTAQKLAAQGIDIILTYQTNAAAAAE
VVAEIEWLGRKAVALPLDVSDSGSFAEFAIQVSTVLAQTWQRESFNYLINNAGIGIHV
PMAETSIEQFDTLMNIHVKGPFFLTQTLLPQLMDGGSIVNISTGLTRFAIPGFGAYAT
MKGAVETMTKYWAKELGSRGIRVNVLAPGAIETDFGGGAVRDNEQMNQFLAQQTALGR
VGLPDDIGGAISALLSPAAAWINAQRIEASGGMFL"
misc_feature 280387..281124
/locus_tag="Sbal_0247"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05557"
/db_xref="CDD:180126"
misc_feature 280387..281121
/locus_tag="Sbal_0247"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(280402..280404,280408..280413,280417..280419,
280474..280482,280654..280662,280798..280806,
280843..280845,280855..280857,280933..280944)
/locus_tag="Sbal_0247"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(280726..280728,280804..280806,280843..280845,
280855..280857)
/locus_tag="Sbal_0247"
/note="active site"
/db_xref="CDD:187535"
gene complement(281372..282892)
/locus_tag="Sbal_0248"
/db_xref="GeneID:4845807"
CDS complement(281372..282892)
/locus_tag="Sbal_0248"
/EC_number="1.2.1.3"
/note="PFAM: aldehyde dehydrogenase;
KEGG: son:SO4480 aldehyde dehydrogenase"
/codon_start=1
/transl_table=11
/product="aldehyde dehydrogenase"
/protein_id="YP_001048651.1"
/db_xref="GI:126172502"
/db_xref="InterPro:IPR002086"
/db_xref="GeneID:4845807"
/translation="MIYAQPGTAGAIVNFKEKYANFIGGKWVAPVNGKYFDNRSPVNG
QNFCQIPRSDAQDIELALDAAHAAKEAWGKTSVTERSNLLLRIADRVEQNLEYLAVAE
TWENGKAVRETLNADLPLFVDHFRYFAGCIRAQEGSAADIDGNTVSYHFPEPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCVVLKPAEQTPVSILVLLELIEDLLPAGILNVVNG
FGAEAGQALATSKRIAKLAFTGSTEIGYHILKCAAESLIPSTVELGGKSPNVFFADVM
DHEDEYLNKAVEGMLLAFFNQGEVCTCPSRVLVQESIFDRFIEKVLARAQTIKQGDPL
DTDTQVGAQASKEQFDKILSYLAIGKAEGAEVLLGGTLCQLDGGQSEGYYISPTIMKG
HNKMRIFQEEIFGPVISVTTFKDEAEALAIANDTEYGLGAGVWTRDMNTAQRMGRGIQ
AGRVWINCYHAYPAHAAFGGYKKSGIGRETHKMMLNHYQNTKNLLVSYDVNPLGFF"
misc_feature complement(281399..282838)
/locus_tag="Sbal_0248"
/note="NAD(P)+-dependent aldehyde dehydrogenase
superfamily; Region: ALDH-SF; cl11961"
/db_xref="CDD:213126"
misc_feature complement(281414..282814)
/locus_tag="Sbal_0248"
/note="Aldehyde dehydrogenase family; Region: Aldedh;
pfam00171"
/db_xref="CDD:201055"
misc_feature complement(order(281489..281491,281603..281605,
281681..281683,281687..281689,281990..281992,
282101..282109,282149..282154,282161..282163,
282170..282181,282320..282325,282329..282331,
282374..282376,282398..282412))
/locus_tag="Sbal_0248"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:143395"
misc_feature complement(order(281990..281992,281999..282001,
282107..282109,282398..282400))
/locus_tag="Sbal_0248"
/note="catalytic residues [active]"
/db_xref="CDD:143395"
gene 283274..285232
/locus_tag="Sbal_0249"
/db_xref="GeneID:4842200"
CDS 283274..285232
/locus_tag="Sbal_0249"
/note="PFAM: sigma-54 factor, interaction
domain-containing protein; helix-turn-helix, Fis-type; GAF
domain protein;
SMART: AAA ATPase;
KEGG: shm:Shewmr7_3771 GAF modulated sigma54 specific
transcriptional regulator, fis family"
/codon_start=1
/transl_table=11
/product="Fis family GAF modulated sigma54 specific
transcriptional regulator"
/protein_id="YP_001048652.1"
/db_xref="GI:126172503"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR002197"
/db_xref="InterPro:IPR003018"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:4842200"
/translation="MAVKPHLPSTQAWLADSWQRSIGAGLSEFQLPQELRLDASELKQ
KHEQYQMLIALVQSHALPLFNQLMAHSNSRLLLSDAEGYVLRHWGVSRYSTKLADVAL
DIGVNWLEQHKGTNAIGTALTAKQAVSVVGEQHFIRQNRFMSCTACPIFSPQGEMLGV
INITSEQQRHTQQTLMLVSSLAQQVETALLCHLPDSRYRIDLAAQPNLLNSGWQGIVI
ADSDGRIVGCNPMAKQLLSHAKVGDSVEQYLGDNWSRAGGFNQHLDLHLQTQPLNIPS
IKSRVATSNKSLNQLGVRFRDPQLERAWQHANKVITKQIPLLVLGETGVGKEQFVKKL
HAQSARRTEHLVAVNCAALPAELVESELFGYQAGAFTGANRTGFIGKIRQAHGGFLFL
DEIGEMPLAAQSRLLRVLQEREVVPVGSNQSFKVDIQIIAATHMDLEQQVAQGLFRQD
LFYRLNGLQVRLPALRERQDIERIIHKLHRKHRIAPQEICPELLGLLMQHDWPGNLRE
LDNLMQVACLMAEGDDTLTWQHLPDYLAQKLACEPLKVDPLNAQLLNTQLLNEEQPLG
EEVKTGQNSASHPLAGKVVSGKVTSGNIAVQPTANAVQSDSLHEAIYSNVLQAYQACG
GNVSQCAKRLGISRNALYRRLKQMGLKG"
misc_feature 283295..284893
/locus_tag="Sbal_0249"
/note="Transcriptional activator of acetoin/glycerol
metabolism [Secondary metabolites biosynthesis, transport,
and catabolism / Transcription]; Region: AcoR; COG3284"
/db_xref="CDD:33094"
misc_feature 283469..283840
/locus_tag="Sbal_0249"
/note="GAF domain; Region: GAF; pfam01590"
/db_xref="CDD:201875"
misc_feature 284219..284641
/locus_tag="Sbal_0249"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 284234..284257
/locus_tag="Sbal_0249"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(284237..284260,284450..284452,284576..284578)
/locus_tag="Sbal_0249"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 284438..284455
/locus_tag="Sbal_0249"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 284633..284635
/locus_tag="Sbal_0249"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature <285122..285217
/locus_tag="Sbal_0249"
/note="Bacterial regulatory protein, Fis family; Region:
HTH_8; pfam02954"
/db_xref="CDD:202485"
gene 285583..286563
/locus_tag="Sbal_0250"
/db_xref="GeneID:4844776"
CDS 285583..286563
/locus_tag="Sbal_0250"
/note="PFAM: Alcohol dehydrogenase, zinc-binding domain
protein; Alcohol dehydrogenase GroES domain protein;
KEGG: she:Shewmr4_2154 alcohol dehydrogenase, zinc-binding
domain protein"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase"
/protein_id="YP_001048653.1"
/db_xref="GI:126172504"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:4844776"
/translation="MFDALLLTQEDKRTFAQVSQITEADLPEGEVLVEVAYSSLNYKD
GLAVTGAGKIIRQFPMVPGIDFAGVVCESTDARYQVGDQVILTGWGVGENHWGGMAQK
ARVKADWLVPMPQGCDAAKAMMIGTAGLTAMLCVQALQQAGITPQSGDILVTGASGGV
GSVAVTLLANAGYRVVACSGRVEQNAPLLRELGAAEVIDRSELEQDAKPLEAQRWAGV
VDTVGNKILAKALAQMQYGGAAAICGLAGGFALPTTVMPFILRGVSLLGIDSVSCPFE
KRKAAWEAVIKALPAHFYQQACQQISLAEVPDFANQIIQGQVTGRVLVKL"
misc_feature 285586..286554
/locus_tag="Sbal_0250"
/note="Yhdh putative quinone oxidoreductases; Region:
MDR_yhdh; cd08288"
/db_xref="CDD:176248"
misc_feature 285592..286560
/locus_tag="Sbal_0250"
/note="putative quinone oxidoreductase, YhdH/YhfP family;
Region: oxido_YhdH; TIGR02823"
/db_xref="CDD:163033"
misc_feature order(285703..285708,285961..285966,285973..285975,
286045..286047,286051..286062,286117..286125,
286180..286182,286243..286248,286309..286323,
286384..286395,286519..286521,286528..286530,
286534..286536)
/locus_tag="Sbal_0250"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:176248"
misc_feature order(286207..286209,286288..286290,286306..286317,
286333..286335,286339..286350,286354..286362,
286366..286389,286396..286401)
/locus_tag="Sbal_0250"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:176248"
gene 286883..287368
/locus_tag="Sbal_0251"
/db_xref="GeneID:4842811"
CDS 286883..287368
/locus_tag="Sbal_0251"
/note="KEGG: shm:Shewmr7_2230 flavocytochrome c"
/codon_start=1
/transl_table=11
/product="flavocytochrome c"
/protein_id="YP_001048654.1"
/db_xref="GI:126172505"
/db_xref="InterPro:IPR006311"
/db_xref="GeneID:4842811"
/translation="MSNANLLGRRNFIKGLGAATGVAMVSPVMAVSERADGIKWDKEI
EILIVGSGFAGLAAAIEATRKGAKDIHIFEQMSYFGGNSAINGGLFAAPGTPMQKKEG
VEDSVEKMVADQIASGRGIADESLLRHVASHAVFFKIVVTLCLKIKLHLLRLLLVPYL
G"
misc_feature 287024..>287134
/locus_tag="Sbal_0251"
/note="NAD(P)-binding Rossmann-like domain; Region:
NAD_binding_8; pfam13450"
/db_xref="CDD:205628"
gene complement(287322..288371)
/locus_tag="Sbal_0252"
/db_xref="GeneID:4845082"
CDS complement(287322..288371)
/locus_tag="Sbal_0252"
/note="PFAM: Integrase, catalytic region;
KEGG: sdn:Sden_2168 integrase, catalytic region"
/codon_start=1
/transl_table=11
/product="integrase catalytic subunit"
/protein_id="YP_001048655.1"
/db_xref="GI:126172506"
/db_xref="InterPro:IPR001584"
/db_xref="GeneID:4845082"
/translation="MPERIALIALIQEAYTQGARLYKACAETGLSKRTYRRWYREGQV
QADLRPTAARPEPANKLEEHERQQILSVCNQAEYASLPPSQIVPTLLDNGIYIASESS
FYRVLNAHGQLNHRGRTQATVNRSKPLSYRADGPNQVWSWDITYLASTVKGQFYYLYL
FEDIYSRKIVGYEVHEQENGEYAAALIQRSLLREQCFNTPLVLHSDNGAPMKSLTMKA
KLEELGITASLSRPRVSNDNPFSESLFKTLKYRPQWPASGFSCLATAREWVEKFVSWY
NDEHKHSQLNFVSPGQRHALQDGAILAKRKKVLEAAKERKPMRWSTEIRNCEAVGAVT
LNPDKAPVEGVINAA"
misc_feature complement(288039..288347)
/locus_tag="Sbal_0252"
/note="Winged helix-turn helix; Region: HTH_29; pfam13551"
/db_xref="CDD:205729"
misc_feature complement(288051..288272)
/locus_tag="Sbal_0252"
/note="Homeodomain-like domain; Region: HTH_32; pfam13565"
/db_xref="CDD:205743"
misc_feature complement(287487..288185)
/locus_tag="Sbal_0252"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: Tra5;
COG2801"
/db_xref="CDD:32633"
misc_feature complement(287619..287966)
/locus_tag="Sbal_0252"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
misc_feature complement(287502..287705)
/locus_tag="Sbal_0252"
/note="Integrase core domain; Region: rve_3; pfam13683"
/db_xref="CDD:205859"
gene complement(288377..288877)
/locus_tag="Sbal_0253"
/db_xref="GeneID:4844392"
CDS complement(288377..288877)
/locus_tag="Sbal_0253"
/note="PFAM: transposase IS3/IS911 family protein;
KEGG: sdn:Sden_2169 hypothetical protein"
/codon_start=1
/transl_table=11
/product="transposase IS3/IS911 family protein"
/protein_id="YP_001048656.1"
/db_xref="GI:126172507"
/db_xref="InterPro:IPR002514"
/db_xref="GeneID:4844392"
/translation="MARYSPERKEAILKKLLPPHNLTVAEVAREEGIAVQTLYHWRDI
ARKEGRPVPGKTLTADDWSAEAKFAVLIETAPLSEAEISQYCREKGLYREQVQQWKLE
CLSGFQTSEVQTKTIKQQAKADKAEIKSLQRELRYKEKALAEAAALLVLRKKLNVLWG
DDSEES"
misc_feature complement(288701..288871)
/locus_tag="Sbal_0253"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
gene 288974..290077
/locus_tag="Sbal_0254"
/db_xref="GeneID:4844393"
CDS 288974..290077
/locus_tag="Sbal_0254"
/note="TIGRFAM: flavocytochrome c;
PFAM: fumarate reductase/succinate dehydrogenase
flavoprotein domain protein;
KEGG: shm:Shewmr7_2230 flavocytochrome c"
/codon_start=1
/transl_table=11
/product="flavocytochrome c"
/protein_id="YP_001048657.1"
/db_xref="GI:126172508"
/db_xref="InterPro:IPR003953"
/db_xref="InterPro:IPR010960"
/db_xref="GeneID:4844393"
/translation="MTLDAGSEYHPYLQQLGGHSVARTYQTSVSCGAGITQPLLKECY
RIGVQTHNRSKFEGFLLGEKGNVVGVKMRENYHFGEDQPGKVLNIRAKRGVIMATGGF
AQNIDLRMAQDPTLTSEVGCTNIPGATGEGMLEMFRLGAVPVHLAHIQSGPWASPDEG
GFGYVSNYSIYNFPHSIAVNCLTGKRFMNEIADRKTRADAELACRDAKGEPLPPILIT
SYKDSKQHPNTAKVIKYNVGWKFDTLETLAKHFDVPLKALEAQIKEYNGYVKTGDDKQ
FGKNMSKAKDKYLEAPFTVVRLWPKVHYCQGGVQVTTKAEVKDSLTGMPILGLYAAGE
VCGGIHGVSRLGSCSIPECMVMGMTAARSIMNA"
misc_feature <289010..290059
/locus_tag="Sbal_0254"
/note="flavocytochrome c; Region: flavo_cyto_c; TIGR01813"
/db_xref="CDD:188168"
misc_feature <289871..290071
/locus_tag="Sbal_0254"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene 290154..290459
/locus_tag="Sbal_0255"
/db_xref="GeneID:4842439"
CDS 290154..290459
/locus_tag="Sbal_0255"
/note="KEGG: shm:Shewmr7_2229 tetraheme cytochrome c"
/codon_start=1
/transl_table=11
/product="tetraheme cytochrome c"
/protein_id="YP_001048658.1"
/db_xref="GI:126172509"
/db_xref="InterPro:IPR011031"
/db_xref="GeneID:4842439"
/translation="MLSAQAVELRDYHKAVIGNDCKACHDNGIKQFPSDQACLKCHNI
EDLALKTARNDEDKWQNPHNNLHYGKELPCQECHGEHKAKQPLCSDCHTFKYDKHKE"
misc_feature 290184..290432
/locus_tag="Sbal_0255"
/note="Heme-binding domain of the class III cytochrome C
family and related proteins; Region: Cytochrom_C3;
cd08168"
/db_xref="CDD:173979"
misc_feature order(290190..290192,290214..290216,290223..290231,
290265..290267,290340..290342,290373..290375,
290382..290387,290415..290417,290424..290429)
/locus_tag="Sbal_0255"
/note="heme-binding residues [chemical binding]; other
site"
/db_xref="CDD:173979"
gene 290835..292079
/locus_tag="Sbal_0256"
/db_xref="GeneID:4843825"
CDS 290835..292079
/locus_tag="Sbal_0256"
/note="KEGG: shm:Shewmr7_2228 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048659.1"
/db_xref="GI:126172510"
/db_xref="GeneID:4843825"
/translation="MKKTIVALSLLSANGAMAADLPNFLDQSDIDNAQFKCLGEPIKY
SKADQKYVDTLWDETLSYLKAYAIALTNGENSHCLNSDEAMIDSTLGGQKMCIMDRRD
MKLMVKNIYQVINNADKAKQCFGAREEVNWIYNPGGELTQNSPVAQHFKRTTFGEFFK
TKVTNKEVKKLGKIFTENFYKMVTGGEVKMPSAFPYDISANALPNLWAAAGWFPMYAE
ESKRNDKNFDNIRGGYAYAEIFGHWGLLRIDEINGEKVGAEVGMTVQSVNTLYPYHNH
AISEIYYNMRVPACTNQFKSFAVRADSPLVKTVKQDTTMRRVQFDAAKHNGHTMWLAG
SYDQDPLMYFHQNTIHAFDIDGSCEAKPEERAIVSVWARSNAHDKRNDYGTTLLCESA
QNPGTPANKDEVIQCDLTHLKW"
gene 292121..293296
/locus_tag="Sbal_0257"
/db_xref="GeneID:4842079"
CDS 292121..293296
/locus_tag="Sbal_0257"
/note="KEGG: shm:Shewmr7_2227 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048660.1"
/db_xref="GI:126172511"
/db_xref="GeneID:4842079"
/translation="MPWTLGARQLKLKGEMMKKLNLSFVAALISMALAAGMVQAQEQQ
DGINVAGTVRVNYAYKDYSESSKDKGGDFAFDMAAIKFNGKLGEWGLASEYRFYDGWQ
ALRYGYGFYELNPEWQLQFGVNQVPFGNPGFISNSFWFGVPYYLGFEDDYDLGIKAIY
SSGAWGTEMAFYKNAEYGAGRSDRYSTDLYSGLVNGTEYHNEETNQLNLRQTYEISYE
GGETRFGGSVEYGQIYNSKTGNNGDRYALAIHMDSNYQGWALQLQVMQYEYDAADAID
NNKIAVAAYNWQYEIASKAQAYSINLAKNIVTDWGSLKFYNDFGIVTPDVADKGYDTS
YQNVTGCAISAGPTYTMIDFIMGKNMYASTRDNGHVGLPEMGDSWDKRVNINFGYYF"
gene complement(293385..294251)
/locus_tag="Sbal_0258"
/db_xref="GeneID:4845735"
CDS complement(293385..294251)
/locus_tag="Sbal_0258"
/note="PFAM: regulatory protein, LysR; LysR,
substrate-binding;
KEGG: shm:Shewmr7_2226 transcriptional regulator, LysR
family"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_001048661.1"
/db_xref="GI:126172512"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:4845735"
/translation="MLKIELLESFIAVAECGNMSKAADKVCRTQSTLSLQIKKLEEVV
GQSLLLRDNKGTTLTESGSTLLNYAYKMMQLNSQAIHDLKDCQNREIIRLGVPTDYIK
FYLNSCLLEFIREFTCIELVIDTDVSGNLFKRLQQGEFDLIVATHWQAPVNGELLFSR
RFHWAAAKNGQAHKRSTVPMALYPENCPIRAQVFANHQLSMRPINVLLSTPSPQALCM
AVENDLAIAPIAEFRTNEHMQILDPHEHGLPPLPIFNESLYLNPETQTEATMQLITLI
KANVEHLSDTID"
misc_feature complement(293397..294248)
/locus_tag="Sbal_0258"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(294090..294242)
/locus_tag="Sbal_0258"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(<293556..293993)
/locus_tag="Sbal_0258"
/note="LysR substrate binding domain; Region:
LysR_substrate; pfam03466"
/db_xref="CDD:202651"
misc_feature complement(order(293586..293591,293595..293600,
293616..293633,293871..293891,293901..293903,
293910..293915,293919..293924))
/locus_tag="Sbal_0258"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 294374..295027
/locus_tag="Sbal_0259"
/db_xref="GeneID:4842458"
CDS 294374..295027
/locus_tag="Sbal_0259"
/note="KEGG: shm:Shewmr7_2225 putative transcriptional
regulator, TetR family"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_001048662.1"
/db_xref="GI:126172513"
/db_xref="GeneID:4842458"
/translation="MSSWEQRSHYLIEVAQRSLIGHKTFDLCRSHLVAASQISKGTIY
NHFTTEADLVVAVACAEYEEWLAAAKRDMQRYPDPLTRFLYHHCYRLHQMLSQQRYVI
ERVMPNQALLLQATDSYRQRFEKISTEYNHWNRLTISEIGDIPGFNRAELVKDYLRGA
MINSDDANRQADDVQLYCQFSYALSQLMGHSDKRIPTKPAFVHWLSHLPSTSAISAV"
misc_feature <294467..294544
/locus_tag="Sbal_0259"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
gene complement(295011..296387)
/locus_tag="Sbal_0260"
/db_xref="GeneID:4842724"
CDS complement(295011..296387)
/locus_tag="Sbal_0260"
/note="PFAM: ATP-binding region, ATPase domain protein
domain protein; histidine kinase, HAMP region domain
protein; histidine kinase A domain protein domain protein;
KEGG: son:SO4478 sensor protein CpxA"
/codon_start=1
/transl_table=11
/product="integral membrane sensor signal transduction
histidine kinase"
/protein_id="YP_001048663.1"
/db_xref="GI:126172514"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:4842724"
/translation="MASITAVSTVPNRLFIKLLLGFWLCSSLIIALVGLLPLLQQSHD
RAPLPPHLEKVLSTIAQRIQENPALLESDFLRRWERHRDMEGKPLRVYLVNSQGQVVN
THRVSRGVRSFMLMADEEKQPISHQFKDELVFGPFQFNLGAETYSLYGRLPDNHPRPW
FFFFAENKLLTLSLAIFLSGLLCGLLAWHLGKALNSLKKSANALAEGDLSNRVDKSTT
QRNDEIGQLATAFNSMADSIEAMVNNQQRLMGDISHELRTPLTRLQLSLALARKKGQQ
TAETERIGYEAEQLEKLISELLELSRVKLSTNETKVHLGLAESLSQVLDDAEFEAEQQ
GKTITIDIDEEIELAHFPKSLSRAIENLLRNAIRYAASDIHLQASATADQVQITIKDD
GPGIDAAELDAIFKPFYRPDSARQRESGGWGLGLAITEAAITAHKGKIKAENRKPTGL
EVTITLPK"
misc_feature complement(295017..296264)
/locus_tag="Sbal_0260"
/note="two-component sensor protein; Provisional; Region:
cpxA; PRK09470"
/db_xref="CDD:181885"
misc_feature complement(295668..295814)
/locus_tag="Sbal_0260"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(295674..295679,295686..295691,
295695..295700,295707..295712,295716..295721,
295776..295778,295782..295787,295794..295799,
295803..295808))
/locus_tag="Sbal_0260"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(<295539..295655)
/locus_tag="Sbal_0260"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(295539..295541,295590..295592,
295599..295601,295611..295613,295620..295622,
295632..295634,295644..295646))
/locus_tag="Sbal_0260"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(295626..295628)
/locus_tag="Sbal_0260"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(295020..295325)
/locus_tag="Sbal_0260"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(295032..295034,295038..295043,
295056..295058,295062..295064,295110..295121,
295200..295205,295209..295211,295215..295217,
295221..295223,295284..295286,295293..295295,
295305..295307))
/locus_tag="Sbal_0260"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(295293..295295)
/locus_tag="Sbal_0260"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(295113..295115,295119..295121,
295203..295205,295209..295211))
/locus_tag="Sbal_0260"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(296375..297061)
/locus_tag="Sbal_0261"
/db_xref="GeneID:4842108"
CDS complement(296375..297061)
/locus_tag="Sbal_0261"
/note="PFAM: response regulator receiver; transcriptional
regulator domain protein;
KEGG: shn:Shewana3_0253 two component transcriptional
regulator, winged helix family"
/codon_start=1
/transl_table=11
/product="two component transcriptional regulator"
/protein_id="YP_001048664.1"
/db_xref="GI:126172515"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:4842108"
/translation="MSRILLIDDDLGLSELLGQLLELEGFQLTLAYDGKQGLDLALSA
DYDLILLDVMLPKLNGFEVLRALRQHKQTPVLMLTARGDEIDRVVGLEIGADDYLPKP
FNDRELIARIRAIIRRSNLTTQEIHAAPAQEFGDLRLDPSRQEAYCNEQLIILTGTEF
TLLHTLALHAGELMNKEELNEKVLGKKLMPFDRSLDMHLSNLRKKLPERGDGRPRVKT
IRGKGYIWLP"
misc_feature complement(296738..>296971)
/locus_tag="Sbal_0261"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(296756..296761,296768..296770,
296825..296827,296882..296884,296906..296908))
/locus_tag="Sbal_0261"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(296906..296908)
/locus_tag="Sbal_0261"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(296882..296890,296894..296899))
/locus_tag="Sbal_0261"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(296753..296761)
/locus_tag="Sbal_0261"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(296384..296665)
/locus_tag="Sbal_0261"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature complement(order(296393..296395,296408..296410,
296444..296449,296471..296473,296480..296482,
296534..296539,296594..296596))
/locus_tag="Sbal_0261"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 297442..297966
/locus_tag="Sbal_0262"
/db_xref="GeneID:4842109"
CDS 297442..297966
/locus_tag="Sbal_0262"
/note="PFAM: protein of unknown function, Spy-related;
KEGG: she:Shewmr4_0253 protein of unknown function,
Spy-related"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048665.1"
/db_xref="GI:126172516"
/db_xref="InterPro:IPR012899"
/db_xref="GeneID:4842109"
/translation="MKTLSPLKASLFAILASSAVFATTVNAEPMDGGCDFSRSEFHKG
DRMMGDRMEHGGRHMDQGGMHRMFEGLDLTDAQKADIKKLFADQKAARADSRPTKEQR
LAHRTEMQALMTAPNFDEVQAKALMSAQQEQRQAQAIERMKLHNQIYNLLTLEQQAKF
KARFEAQAGKEPRG"
misc_feature 297649..297936
/locus_tag="Sbal_0262"
/note="CpxP component of the bacterial Cpx-two-component
system and related proteins; Region: CpxP_like; cd09916"
/db_xref="CDD:197366"
misc_feature order(297757..297759,297769..297771,297778..297783,
297793..297795,297799..297801,297811..297813,
297820..297822,297832..297834,297844..297846,
297856..297858,297865..297870,297877..297879,
297886..297888,297919..297924,297931..297933)
/locus_tag="Sbal_0262"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:197366"
gene 298018..298908
/locus_tag="Sbal_0263"
/db_xref="GeneID:4842111"
CDS 298018..298908
/locus_tag="Sbal_0263"
/note="TIGRFAM: cation diffusion facilitator family
transporter;
PFAM: cation efflux protein;
KEGG: she:Shewmr4_0254 cation diffusion facilitator family
transporter"
/codon_start=1
/transl_table=11
/product="cation diffusion facilitator family transporter"
/protein_id="YP_001048666.1"
/db_xref="GI:126172517"
/db_xref="InterPro:IPR002524"
/db_xref="GeneID:4842111"
/translation="MTQTSQYDFWVKLASRASVATALILILIKMFAWLYSGSASMLAS
LTDSFADALASIINFIAIRYALVPPDHDHRYGHGKAEPLASLAQSAFIMGSAFLLLFY
GGERLLTPVPVENATIGVVVSVIAIIMTLALVTLQKRALAATKSTVVEADSLHYKSDL
FLNGAVLLALVLSQYGWWWADGLFAVMIAFYIGHQAFGLGYRSIQALLDRELDEETRQ
QITQIAMEDPRVQGLHDLRTRQAGKTVFIQFHLELDGNLSLNEAHSIADTTGIKVKAA
FEDAEVIIHQDPVKSEVNET"
misc_feature 298018..298884
/locus_tag="Sbal_0263"
/note="Cation efflux family; Region: Cation_efflux;
cl00316"
/db_xref="CDD:213092"
misc_feature 298048..298902
/locus_tag="Sbal_0263"
/note="Predicted Co/Zn/Cd cation transporters [Inorganic
ion transport and metabolism]; Region: MMT1; COG0053"
/db_xref="CDD:30402"
gene 298923..299375
/locus_tag="Sbal_0264"
/db_xref="GeneID:4842919"
CDS 298923..299375
/locus_tag="Sbal_0264"
/note="KEGG: she:Shewmr4_0255 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048667.1"
/db_xref="GI:126172518"
/db_xref="GeneID:4842919"
/translation="MAWMQKQGHRWNHSTRLICRYQRLSTRFELIVESEIRDVSVPAD
AEITVSTQAQSSRVNQADSTVTPVIVGAWSQLVLRKHLYYLPQKIDFEISNQTYRVHI
WPLFLWRTRITCVVTGRVVVSECLDVRRRRSLIRWLYASFIGLLRVLS"
gene 299580..300141
/locus_tag="Sbal_0265"
/pseudo
/db_xref="GeneID:4841694"
gene complement(300279..301691)
/locus_tag="Sbal_0266"
/db_xref="GeneID:4843444"
CDS complement(300279..301691)
/locus_tag="Sbal_0266"
/note="KEGG: she:Shewmr4_0257 nitrogen metabolism
transcriptional regulator, NtrC, fis family;
TIGRFAM: nitrogen regulation protein NR(I);
PFAM: response regulator receiver; sigma-54 factor,
interaction domain-containing protein; helix-turn-helix,
Fis-type; ATPase associated with various cellular
activities, AAA_5;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="nitrogen metabolism transcriptional regulator,
NtrC, Fis family"
/protein_id="YP_001048668.1"
/db_xref="GI:126172519"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR002197"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR010114"
/db_xref="InterPro:IPR011704"
/db_xref="GeneID:4843444"
/translation="MRISEQVWILDDDSSIRWVLEKALQGAKLSTASFAAAESLWQAL
EISQPHVIVSDIRMPGTDGLSLLERLQVHYPHIPVIIMTAHSDLDSAVSAYQAGAFEY
LPKPFDIDEAISLVERALTHATEQSPAPAQEAQVKTPEIIGEAPAMQEVFRAIGRLSR
SSISVLINGQSGTGKELVAGALHKHSPRKDKPFIALNMAAIPKDLIESELFGHEKGAF
TGAANVRQGRFEQANGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGHNAVQVDVR
IIAATHQDLELLVQKGGFREDLFHRLNVIRVHLPPLSQRREDIPQLATHFLASAAKEI
GVETKIMTKETAVKLSQLPWPGNVRQLENTCRWLTVMASGQEILPQDLPPELLKDPVS
VTHTAKGSQDWQSALTEWIDQKLSEGNSDLLTEVQPAFERILLETALRHTQGHKQEAA
KRLGWGRNTLTRKLKELSMD"
misc_feature complement(300282..301673)
/locus_tag="Sbal_0266"
/note="nitrogen regulation protein NR(I); Provisional;
Region: glnG; PRK10923"
/db_xref="CDD:182842"
misc_feature complement(301332..301667)
/locus_tag="Sbal_0266"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(301374..301379,301386..301388,
301443..301445,301503..301505,301527..301529,
301656..301661))
/locus_tag="Sbal_0266"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(301527..301529)
/locus_tag="Sbal_0266"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(301503..301511,301515..301520))
/locus_tag="Sbal_0266"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(301371..301379)
/locus_tag="Sbal_0266"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(300759..301268)
/locus_tag="Sbal_0266"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(301164..301187)
/locus_tag="Sbal_0266"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(300846..300848,300972..300974,
301161..301184))
/locus_tag="Sbal_0266"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(300969..300986)
/locus_tag="Sbal_0266"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(300789..300791)
/locus_tag="Sbal_0266"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature complement(300291..300410)
/locus_tag="Sbal_0266"
/note="Bacterial regulatory protein, Fis family; Region:
HTH_8; pfam02954"
/db_xref="CDD:202485"
gene complement(301730..302776)
/locus_tag="Sbal_0267"
/db_xref="GeneID:4841477"
CDS complement(301730..302776)
/locus_tag="Sbal_0267"
/note="PFAM: ATP-binding region, ATPase domain protein
domain protein; histidine kinase A domain protein domain
protein; PAS fold-4 domain protein; PAS fold domain
protein;
KEGG: shn:Shewana3_0259 signal transduction histidine
kinase, nitrogen specific, NtrB"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase, nitrogen
specific, NtrB"
/protein_id="YP_001048669.1"
/db_xref="GI:126172520"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR013656"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:4841477"
/translation="MDKETLLNHLVTAVLVIDKDLKPCYANAAAEQLLGVGSHRLVEQ
ALPEHYQILGVEAQLLRDAVAAGQGLTVNTAALVTLDGQHHTVDLTLIPLDDEAELSL
LELRQVDQQRRIHQQLSQDAQQQAAQFLVRNLAHEIKNPLGGLRGAAQLLSRELDDPA
LKEFTTLIIEQADRLRNLVDRLLGPQRPTQHSLHNIHQVVQKVYKLVEMALPANIQLK
RDYDPSIPDIEMDPDQMQQAVLNILQNAVQALEHTGGEILLRTRTQHQVTIGSQRHKL
VLTLSIIDNGPGIPPELMDTLFYPMVTGREQGSGLGLSIAHNIARLHSGRIDCLSSAG
HTEFIISLPILGAK"
misc_feature complement(301745..302773)
/locus_tag="Sbal_0267"
/note="nitrogen regulation protein NR(II); Provisional;
Region: glnL; PRK11073"
/db_xref="CDD:182947"
misc_feature complement(<302633..302767)
/locus_tag="Sbal_0267"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cl02459"
/db_xref="CDD:207601"
misc_feature complement(302228..302389)
/locus_tag="Sbal_0267"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(302231..302233,302243..302245,
302252..302254,302264..302266,302273..302275,
302285..302287,302333..302335,302342..302344,
302354..302356,302363..302365,302375..302377,
302387..302389))
/locus_tag="Sbal_0267"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(302369..302371)
/locus_tag="Sbal_0267"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(301751..302074)
/locus_tag="Sbal_0267"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(301763..301765,301769..301771,
301784..301786,301790..301792,301838..301849,
301910..301915,301919..301921,301925..301927,
301931..301933,302033..302035,302042..302044,
302054..302056))
/locus_tag="Sbal_0267"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(302042..302044)
/locus_tag="Sbal_0267"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(301841..301843,301847..301849,
301913..301915,301919..301921))
/locus_tag="Sbal_0267"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(302930..303436)
/locus_tag="Sbal_0268"
/db_xref="GeneID:4842620"
CDS complement(302930..303436)
/locus_tag="Sbal_0268"
/note="KEGG: son:SO4470 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048670.1"
/db_xref="GI:126172521"
/db_xref="GeneID:4842620"
/translation="MRSLTLIGLVLFSMLAQATVYKWVDKDGKVHYSDEPQPNAQVVE
LKEKTLNQIALPLPKTDSNNANQAIESIQYQVNITSPAEEETVRDNNGDFDVVATITP
ELKSQYLMALKLDGNPVGQPQIGGTFKLKNIDRGEHTLVVDALTQNGKVFASSSPRKI
FLHQAAKR"
misc_feature complement(303245..303421)
/locus_tag="Sbal_0268"
/note="Domain of unknown function (DUF4124); Region:
DUF4124; pfam13511"
/db_xref="CDD:205689"
gene complement(303630..304256)
/locus_tag="Sbal_0269"
/db_xref="GeneID:4844193"
CDS complement(303630..304256)
/locus_tag="Sbal_0269"
/note="PFAM: Glutathione S-transferase, N-terminal domain;
KEGG: sdn:Sden_1385 glutathione S-transferase-like
protein"
/codon_start=1
/transl_table=11
/product="glutathione S-transferase domain-containing
protein"
/protein_id="YP_001048671.1"
/db_xref="GI:126172522"
/db_xref="InterPro:IPR004045"
/db_xref="GeneID:4844193"
/translation="MITLHHLNKSRSKRIIWLLEELGQPYQIKSYQRDSQTFLAPPEL
KQIHPLGKSPVIEMDGQVIAESGAITEYLIEKYAADTLAPARDSADYVDYLQWLHFAE
SSAMLPLLLRMFVQKDGCKTNFLEGYAAIEVSKISHYFNDMLAGKTYLVTDKLTGADI
MMSFVVELLANSGDLEKFEHIQRYATQLSQHAAWVKASEIEKQLDASV"
misc_feature complement(303639..304256)
/locus_tag="Sbal_0269"
/note="Glutathione S-transferase [Posttranslational
modification, protein turnover, chaperones]; Region: Gst;
COG0625"
/db_xref="CDD:30970"
misc_feature complement(304023..304253)
/locus_tag="Sbal_0269"
/note="GST_N family, Saccharomyces cerevisiae GTT1-like
subfamily; composed of predominantly uncharacterized
proteins with similarity to the S. cerevisiae GST protein,
GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are
cytosolic dimeric proteins involved...; Region:
GST_N_GTT1_like; cd03046"
/db_xref="CDD:48595"
misc_feature complement(order(304044..304049,304056..304058,
304194..304199,304206..304211,304215..304220,
304224..304226))
/locus_tag="Sbal_0269"
/note="putative C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:48595"
misc_feature complement(order(304059..304064,304095..304103,
304224..304226))
/locus_tag="Sbal_0269"
/note="putative GSH binding site (G-site) [chemical
binding]; other site"
/db_xref="CDD:48595"
misc_feature complement(order(304044..304046,304053..304058,
304062..304067,304101..304103))
/locus_tag="Sbal_0269"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:48595"
misc_feature complement(303684..304007)
/locus_tag="Sbal_0269"
/note="C-terminal, alpha helical domain of the Glutathione
S-transferase family; Region: GST_C_family; cl02776"
/db_xref="CDD:207726"
misc_feature complement(order(303753..303755,303765..303767,
303774..303779,303786..303788,303951..303953,
303972..303974))
/locus_tag="Sbal_0269"
/note="N-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:198286"
misc_feature complement(order(303840..303842,303948..303950,
303957..303962,303969..303974))
/locus_tag="Sbal_0269"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:198286"
misc_feature complement(order(303753..303755,303762..303764,
303936..303941,303951..303953))
/locus_tag="Sbal_0269"
/note="substrate binding pocket (H-site) [chemical
binding]; other site"
/db_xref="CDD:198286"
gene complement(304392..305090)
/locus_tag="Sbal_0270"
/db_xref="GeneID:4841816"
CDS complement(304392..305090)
/locus_tag="Sbal_0270"
/note="PFAM: ThiJ/PfpI domain protein;
KEGG: sfr:Sfri_0805 ThiJ/PfpI domain protein"
/codon_start=1
/transl_table=11
/product="ThiJ/PfpI domain-containing protein"
/protein_id="YP_001048672.1"
/db_xref="GI:126172523"
/db_xref="InterPro:IPR002818"
/db_xref="GeneID:4841816"
/translation="MKMKMNILMVLTSHDKLGDTGLKTGFWLEEFASPFYEFKDKGFD
ITLASPLGGQPPLDPKSDEPDFQTEATARFSKDPEAQALLANTTRLSEINAADYDAVF
YPGGHGPLWDLAEDKHSIALIEQFYQANKPLGLVCHAPAALLHPKASDGKPLVSGKRV
TGFSNSEEEAVQLTHIVPFLVEDMLQKNGGTYVKGDDWTSFVVADGHLITGQNPGSSE
AVAQAIVAQLNARG"
misc_feature complement(304407..305072)
/locus_tag="Sbal_0270"
/note="Type 1 glutamine amidotransferase (GATase1)-like
domain found in proteins similar to Escherichia coli Hsp31
protein; Region: GATase1_Hsp31_like; cd03141"
/db_xref="CDD:153235"
misc_feature complement(304398..305027)
/locus_tag="Sbal_0270"
/note="Putative intracellular protease/amidase [General
function prediction only]; Region: ThiJ; COG0693"
/db_xref="CDD:31037"
misc_feature complement(order(304587..304589,304677..304682))
/locus_tag="Sbal_0270"
/note="potential catalytic triad [active]"
/db_xref="CDD:153235"
misc_feature complement(304680..304682)
/locus_tag="Sbal_0270"
/note="conserved cys residue [active]"
/db_xref="CDD:153235"
gene complement(305162..306319)
/locus_tag="Sbal_0271"
/db_xref="GeneID:4841817"
CDS complement(305162..306319)
/locus_tag="Sbal_0271"
/note="PFAM: iron-containing alcohol dehydrogenase;
KEGG: shn:Shewana3_0261 iron-containing alcohol
dehydrogenase"
/codon_start=1
/transl_table=11
/product="iron-containing alcohol dehydrogenase"
/protein_id="YP_001048673.1"
/db_xref="GI:126172524"
/db_xref="InterPro:IPR001670"
/db_xref="GeneID:4841817"
/translation="MLNFNYYNPTRIRFGKDTIAEIDTLVPSDAKVMILFGGSSARKT
GTLDEVKQSLGNRFIVEFDGIEPNPTYETLMKAVAQVREQKIDFLLAVGGGSVIDGTK
FVAAAAVFEGEPWDILTSWGAKVTQAMPFGSVLTLPATGSEMNNASVVTRKSLQAKLP
FRNDLVYPQFSILDPTKTFTLPERQVANGVVDAFVHITEQYLTYPVNAAVQDRFAEGL
LQTLIELGPQVLVQPEDYDIRANLMWVATMALNGTIGVGVPHDWATHMIGHELTALYD
IDHARTLAIVLPALLQCTKEAKREKLLQYADRVWHINTGTDDERIDAAIAKTKAFFEA
MGIPTHLSAYDLDASHVDTVVKQLELHGMVALGEHGNINPAMSRDILTLAL"
misc_feature complement(305165..306319)
/locus_tag="Sbal_0271"
/note="Uncharacterized oxidoreductases, Fe-dependent
alcohol dehydrogenase family [Energy production and
conversion]; Region: COG1979"
/db_xref="CDD:32162"
misc_feature complement(305177..306313)
/locus_tag="Sbal_0271"
/note="Butanol dehydrogenase catalyzes the conversion of
butyraldehyde to butanol with the cofactor NAD(P)H being
oxidized in the process; Region: BDH; cd08187"
/db_xref="CDD:173946"
misc_feature complement(order(305588..305590,305597..305602,
305648..305650,305660..305662,306275..306280,
306284..306289,306293..306295))
/locus_tag="Sbal_0271"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:173946"
misc_feature complement(order(305483..305485,305525..305527,
305732..305734,305744..305746,305777..305782,
305789..305791,305846..305848,305873..305875,
305879..305881,305885..305887,305894..305896,
305900..305902,305909..305914,306023..306025,
306032..306040,306116..306121,306200..306208))
/locus_tag="Sbal_0271"
/note="active site"
/db_xref="CDD:173946"
misc_feature complement(order(305483..305485,305525..305527,
305732..305734,305744..305746))
/locus_tag="Sbal_0271"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:173946"
gene complement(306503..307099)
/locus_tag="Sbal_0272"
/db_xref="GeneID:4841501"
CDS complement(306503..307099)
/locus_tag="Sbal_0272"
/note="PFAM: regulatory protein, TetR;
KEGG: shm:Shewmr7_3760 transcriptional regulator, TetR
family"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_001048674.1"
/db_xref="GI:126172525"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:4841501"
/translation="MKIETQSTRQHILDIGYKLIVRKGFSSVGLSLLLQAAEVPKGSF
YHYFKSKEQFGEALITDYFEKYQLDLDALFNDSTLTGYQRLMQYWQQWLHVQADGCVD
QKCLVVKLSAEVADLSEAMRVALLKGSAGIIDRLTTCVQVGINDSSIAEQDPQSTAEM
LYHMWLGASLMNKLGHSPAALERALVTTKAILTPKTAL"
misc_feature complement(306542..307099)
/locus_tag="Sbal_0272"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature complement(306926..307066)
/locus_tag="Sbal_0272"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene complement(307387..307698)
/locus_tag="Sbal_0273"
/db_xref="GeneID:4844353"
CDS complement(307387..307698)
/locus_tag="Sbal_0273"
/note="PFAM: protein of unknown function DUF1255;
KEGG: shm:Shewmr7_3759 protein of unknown function
DUF1255"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048675.1"
/db_xref="GI:126172526"
/db_xref="InterPro:IPR009664"
/db_xref="GeneID:4844353"
/translation="MSLLEQVSVSKKANIYFDGRVASRSVFFADGSKQTLGVVQPGEY
EFSTSQGEIMEVISGRFEVLLPETTTWQEFSEGTQFELAANVSFKIRNTAIAEYCCSY
L"
misc_feature complement(307390..307668)
/locus_tag="Sbal_0273"
/note="Protein of unknown function (DUF1255); Region:
DUF1255; pfam06865"
/db_xref="CDD:148466"
gene 308057..310012
/locus_tag="Sbal_0274"
/db_xref="GeneID:4842751"
CDS 308057..310012
/locus_tag="Sbal_0274"
/note="PFAM: chemotaxis sensory transducer;
KEGG: shn:Shewana3_0264 methyl-accepting chemotaxis
sensory transducer"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis sensory transducer"
/protein_id="YP_001048676.1"
/db_xref="GI:126172527"
/db_xref="InterPro:IPR004089"
/db_xref="InterPro:IPR004090"
/db_xref="GeneID:4842751"
/translation="MGFTRKIQLISLLIVLLPLIFATAIVTYIARDELFAEAQSRLVA
VREIKQRQIVGMFQDFSDNLQAVSAVIASQKSLDTISDLDETLKLLNKSLGFYDLFII
RDDGTVFYTAAKESDFGTNLRTGPYHDSGLAQLFNKALGSTGTVLLQDFSAYAPSNGQ
PAAFIGQSIQFNQQRLVVAAQVSIDRINRVMQIREGMGQSGETYLIGPNNRMRSDSFL
DPNNRTVTASFAGTVAQNGVDTLAVKEALAGKTGVMQVNDYNHNPVLSAYSPVVELGL
RWGLMAEIDVSEIAAPAYRMLFIGLFVCVAALVLAFAAAKLVTGFVLKPLGGEPEDMC
NLTSMIASGDLTHNLPHVQTDNHLMSWLARMQTKLKEIISQLVGVGHELESAAEQNSA
AMTQADCSIQMQAKETDMLATAVEEMSYAAAEISTNTLKSSDEVSACTHSSEILSQNL
ASTRKSLKVTLSSFATIHQQVGSLEADSQKIGSVLAVINAIAEQTNLLSLNAAIEAAR
AGEHGRGFAVVADEVRQLAVKVQLATQDIGQVLKGIQQQSGVLALHSVTCTTEASKTA
EDADGMQAAVDDIALRLETLKALMIQTATAAEEQTTVSATIAQGIAGLSVAAEENSAA
ISQVAASTRSLLGLANQLGLTTAQFKV"
misc_feature 309227..310006
/locus_tag="Sbal_0274"
/note="Methyl-accepting chemotaxis-like domains
(chemotaxis sensory transducer); Region: MA; smart00283"
/db_xref="CDD:197627"
misc_feature 309302..309943
/locus_tag="Sbal_0274"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature order(309326..309331,309350..309355,309362..309364,
309371..309376,309380..309385,309392..309394,
309401..309403,309413..309415,309422..309424,
309431..309436,309443..309448,309455..309457,
309467..309469,309473..309478,309485..309487,
309494..309499,309506..309511,309518..309520,
309527..309529,309536..309541,309548..309550,
309560..309562,309569..309571,309590..309592,
309602..309604,309611..309613,309620..309625,
309632..309634,309641..309646,309653..309658,
309662..309667,309674..309679,309716..309721,
309728..309730,309737..309742,309749..309751,
309758..309763,309767..309772,309779..309784,
309791..309793,309800..309805,309812..309814,
309821..309826,309872..309877,309884..309889,
309893..309898,309905..309907,309914..309919,
309926..309928,309935..309940)
/locus_tag="Sbal_0274"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature 309536..309637
/locus_tag="Sbal_0274"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene complement(310152..312266)
/locus_tag="Sbal_0275"
/db_xref="GeneID:4843853"
CDS complement(310152..312266)
/locus_tag="Sbal_0275"
/note="PFAM: protein of unknown function DUF323;
Methyltransferase type 11; Methyltransferase type 12;
KEGG: shm:Shewmr7_3757 protein of unknown function DUF323"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048677.1"
/db_xref="GI:126172528"
/db_xref="InterPro:IPR005532"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:4843853"
/translation="MDKPITQPPQTLKLIGETEAGKRLELKQYFNQTWALYESLFDLI
QEDSAYYLKAEPLRHPLIFYFGHTATFYINKLKLGKFLDERVNDNFESMFAIGVDEMS
WDDLNEQHYPWPNVPEVRSYRQQVNAVVNRVIDEMPLALPITQNSPAWIILMGIEHER
IHLETSSVIIRQLPLEHVAPNSLWAACQDFTAAEANSLLAVKGQKVTLGKTEQDQTYG
WDNEYGHKIFNVVDFKASKFLVSNQEYLAFVEAGGYRSPQFWNEEGQAWLAYTQAQMP
RFWRLKQDKWWQRNLAEEIPLPLNWPVEVNQLEAKAFCNWKTEQNQSNIRLLTEAEWY
ILRENVPADAPDWHEVPGNITLAYYASSCPVNRFEHNGFFDIVGNVWQWTETAIDGFN
GFAVHPLYDDFSTPTFDGKHNLIKGGSWISTGNEAIASSRYAFRRHFYQHAGFRYVES
TQNPAQMAEVNVYETDELISQYLEFHYGAEYFGVANFCVNGVQQALSEIQLTHTAKAL
DIGCSVGRASFELAKVFDHVDGIDFSARFIQQAYALTEQGEKRYTIRTEGDLQEFKSA
SLAKLGYELEAKKVNFMQGDACNLKPLYTGYDLVYASNLIDRLNDPKHFLTSIAQRIN
QGGYLVIASPYTWLEDYTPKDKWLGGVKVKGENFTTLDGLTETLIGQFELVAVKEIPF
VIRETKRKFQHSVSEMTIWRKR"
misc_feature complement(311772..312182)
/locus_tag="Sbal_0275"
/note="DinB superfamily; Region: DinB_2; pfam12867"
/db_xref="CDD:205116"
misc_feature complement(310917..311786)
/locus_tag="Sbal_0275"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1262"
/db_xref="CDD:31454"
misc_feature complement(310923..311627)
/locus_tag="Sbal_0275"
/note="Formylglycine-generating sulfatase enzyme; Region:
FGE-sulfatase; cl15394"
/db_xref="CDD:199530"
misc_feature complement(<310350..310766)
/locus_tag="Sbal_0275"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:206018"
misc_feature complement(310374..310751)
/locus_tag="Sbal_0275"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(310458..310460,310506..310514,
310668..310673,310719..310739))
/locus_tag="Sbal_0275"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 312629..313024
/locus_tag="Sbal_0276"
/db_xref="GeneID:4845854"
CDS 312629..313024
/locus_tag="Sbal_0276"
/note="KEGG: shm:Shewmr7_3756 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048678.1"
/db_xref="GI:126172529"
/db_xref="GeneID:4845854"
/translation="MTINALWIPAWYELDQSIVVGVTEEFVFHKTVANEALTFYSGAK
GSDAAKATGTISAIKHNVLGDIESVDAQGLDYTLVLQDGRRLLVNAEENPGLIYEWVD
DSWQPSDMVITDWTLAVQFASLSPLTPIK"
gene complement(313065..313262)
/locus_tag="Sbal_0277"
/db_xref="GeneID:4842596"
CDS complement(313065..313262)
/locus_tag="Sbal_0277"
/note="KEGG: son:SO4461 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048679.1"
/db_xref="GI:126172530"
/db_xref="GeneID:4842596"
/translation="MESNAMLMERWDTAEEKAEQLRRYQLCLDEFNELDFHDVYVAEI
KKEYQQLAELVKVQSTSDPER"
gene 313607..314458
/locus_tag="Sbal_0278"
/db_xref="GeneID:4842922"
CDS 313607..314458
/locus_tag="Sbal_0278"
/note="PFAM: PfkB domain protein;
KEGG: son:SO4458 carbohydrate kinase, PfkB family"
/codon_start=1
/transl_table=11
/product="ribokinase-like domain-containing protein"
/protein_id="YP_001048680.1"
/db_xref="GI:126172531"
/db_xref="InterPro:IPR002173"
/db_xref="InterPro:IPR011611"
/db_xref="GeneID:4842922"
/translation="MANILLVANLNCDRILLLDKPLKTGGRFHYQDGGQRLGGGGANT
GLGLVWAGHSVALVSQVGRDDMGDWLIAEASTQGLDCRLVQRRAGNTCEMLLVMTPDG
ERTIIRPQRPIFELSVPPKWQPWDALYFNTSAEGSVSWAKTALEHCLVVAQLAKDDRQ
RPCHILLASMSDIQGRCDGASWEYGKSIGGEGLRYFIVTDGINGAKVYTHDQVQDVAA
IPATVVDTTGAGDAYAAGLIHSLCTGQSITEAMAEGAVWAAFAVATDSSIPGEALKQY
LEAKQIA"
misc_feature 313613..314350
/locus_tag="Sbal_0278"
/note="ribokinase/pfkB superfamily: Kinases that accept a
wide variety of substrates, including carbohydrates and
aromatic small molecules, all are phosphorylated at a
hydroxyl group. The superfamily includes ribokinase,
fructokinase, ketohexokinase; Region:
ribokinase_pfkB_like; cl00192"
/db_xref="CDD:212177"
misc_feature 313613..314347
/locus_tag="Sbal_0278"
/note="Sugar kinases, ribokinase family [Carbohydrate
transport and metabolism]; Region: RbsK; COG0524"
/db_xref="CDD:30870"
misc_feature order(313733..313735,314288..314290,314297..314299)
/locus_tag="Sbal_0278"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73186"
misc_feature order(314111..314113,314201..314203,314282..314284,
314291..314296,314303..314305)
/locus_tag="Sbal_0278"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73186"
gene 314776..316236
/locus_tag="Sbal_0279"
/db_xref="GeneID:4842923"
CDS 314776..316236
/locus_tag="Sbal_0279"
/note="TIGRFAM: diguanylate cyclase;
PFAM: GGDEF domain containing protein;
KEGG: she:Shewmr4_0268 diguanylate cyclase"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase"
/protein_id="YP_001048681.1"
/db_xref="GI:126172532"
/db_xref="InterPro:IPR000160"
/db_xref="GeneID:4842923"
/translation="MGNNAWNDKNKFIWLLSVLLLVAFLVTSGISYKVAHDSLSQQIE
SNTLPLTSDNIYSEIQQDLLRPIFISSLMAQDTFVRDWTLSHEQEPEKLIRYLKEIQE
KYDTVTSFFVSEKSRHYYHSTGILKQIQDVEPDDAWYFRVRSLPESEHYEVNIDADTA
DRSKTTVFVNYKVFDFEGKFIGVTGVGLAVEKVKSLIELYQKRYNRRVFFTDRQGNVT
LHGDEYDGADSLQTSPGLENLATRILTSPSAAFSYQRNGKTVYLNSRLVPEFKWYLIV
EQEDAPQERELLNTFWGNLGLSLMVTLGILFISNMTLGRYQRKLEVMASTDKLTGAAN
RQVFDEYFRQALDKAKLAQSPISILLLDIDHFKKVNDSYGHGIGDLVLKTMTNMLRGA
LQQQDILCRWGGEEFLILLPGMDLTRAAELAEQIRELIFQREIKVNGLHISITASIGV
AEHQAQEPAEDLIKRADLALYQAKEAGRNQVVLNHS"
misc_feature 315751..316221
/locus_tag="Sbal_0279"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature order(315859..315861,315988..315990)
/locus_tag="Sbal_0279"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(315874..315876,315883..315888,315898..315900,
315910..315912,315976..315978,315982..315993)
/locus_tag="Sbal_0279"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(315964..315966,316048..316050)
/locus_tag="Sbal_0279"
/note="I-site; other site"
/db_xref="CDD:143635"
gene 316372..317061
/locus_tag="Sbal_0280"
/db_xref="GeneID:4843066"
CDS 316372..317061
/locus_tag="Sbal_0280"
/note="PFAM: 3-alpha; MOSC domain containing protein;
KEGG: she:Shewmr4_0269 MOSC domain containing protein"
/codon_start=1
/transl_table=11
/product="MOSC domain-containing protein"
/protein_id="YP_001048682.1"
/db_xref="GI:126172533"
/db_xref="InterPro:IPR005163"
/db_xref="InterPro:IPR005302"
/db_xref="GeneID:4843066"
/translation="MSKLLINKLSGLYLGTYLQEMAGVATGIDGKQAAQQLLVHVSHV
EGDAQADPKHHGGLDRVLHHFPREHYGQYRRWDLITQLEDAPSMGENISTVGLNETQV
NIGDILQIGAVTVQVTQPRSPCFKLNLQFGHKEFALAMQQSQLCGWFYRVLTPGIIQL
NDKIELIERRTDISVAEAMALYFSPTFNASGYDRLACCEGLAQSWVNSLQRRLASQTV
EDWQMRLYQSY"
misc_feature 316393..317016
/locus_tag="Sbal_0280"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG2258"
/db_xref="CDD:32439"
misc_feature 316504..316869
/locus_tag="Sbal_0280"
/note="MOSC domain; Region: MOSC; pfam03473"
/db_xref="CDD:202655"
misc_feature 316885..317025
/locus_tag="Sbal_0280"
/note="3-alpha domain; Region: 3-alpha; pfam03475"
/db_xref="CDD:202656"
gene 317371..317727
/locus_tag="Sbal_0281"
/db_xref="GeneID:4844664"
CDS 317371..317727
/locus_tag="Sbal_0281"
/note="KEGG: shn:Shewana3_0271 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048683.1"
/db_xref="GI:126172534"
/db_xref="GeneID:4844664"
/translation="MIEPVTKSDKDFGLLVYASSFVGYLVPLGSILGPLIIWLMKREE
SAFVDQCGRSCLNFKLSLLIYVIISGVLALVGIGFIFLAILGIFDLVCTVLAIIKASE
GKVYKYPLTIKFIAMD"
misc_feature 317380..317715
/locus_tag="Sbal_0281"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3296"
/db_xref="CDD:33105"
gene complement(317803..319728)
/locus_tag="Sbal_0282"
/db_xref="GeneID:4844387"
CDS complement(317803..319728)
/locus_tag="Sbal_0282"
/note="PFAM: histidine kinase, HAMP region domain protein;
chemotaxis sensory transducer;
KEGG: shm:Shewmr7_3750 methyl-accepting chemotaxis sensory
transducer"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis sensory transducer"
/protein_id="YP_001048684.1"
/db_xref="GI:126172535"
/db_xref="InterPro:IPR000727"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR004089"
/db_xref="InterPro:IPR004090"
/db_xref="GeneID:4844387"
/translation="MIFMIFNNLTIKQKILLTVTFAVLLSTILVGVLSQRSAKNVVQQ
RMLGSELPSLMMQIRNKIDLDISTLMNAAEQLASSRMLLQWLEDGRPQAQETQVVAQL
KDITRQYKLAQASYADRQTAAYYTQDGFLRVLTPAQDGWFFGYRDSGQERMLNVFTEA
NGEVKLFINYQQPNGRGLVGLAKSLDDMVRLLSSFKIEETGFVYLVDAKGEVKLHPDT
SQIGKSNLSNLYKDANSSALLNRGDFNLINTKINGENMLVASSYIASMDWYLVAQVPE
AEVFALLTEAAYQILIWTLLIAAGFIVLAIVVAGSVSRPIAQVAAMFRDIGEGEGDLR
QRLPVNGEDEIAQLAKGFNSFISKIQDSVIEVAQTSEQLGFSAKDVSNQAQQTLEDSH
EQKDRTMMVVTAINEMGATVNEIASNAAQAAVAARDADTEASSGQVVVTRARDTINQL
SKDVGQVGEVIESLATHTKSIGGILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAV
VADEVRNLASRTAASTNEVQGMIDKLQSEASRAVNAMAQSRTRSHEGVVAVDEASKSL
IGISDRIGLISDMNIQVAAATEEQSTVVEDINRNVTEINDITQRTANTAQAAAQASLA
LNQLSHRLDTLVAKFKV"
misc_feature complement(319054..>319200)
/locus_tag="Sbal_0282"
/note="Cache domain; Region: Cache_1; pfam02743"
/db_xref="CDD:145738"
misc_feature complement(318646..318795)
/locus_tag="Sbal_0282"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(318652..318657,318664..318669,
318673..318678,318685..318690,318694..318699,
318751..318753,318757..318762,318769..318774,
318778..318783,318790..318795))
/locus_tag="Sbal_0282"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(317809..318594)
/locus_tag="Sbal_0282"
/note="Methyl-accepting chemotaxis-like domains
(chemotaxis sensory transducer); Region: MA; smart00283"
/db_xref="CDD:197627"
misc_feature complement(317914..318513)
/locus_tag="Sbal_0282"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature complement(order(317917..317922,317929..317931,
317938..317943,317950..317952,317959..317964,
317968..317973,317980..317985,317989..317994,
318001..318003,318010..318015,318022..318024,
318031..318036,318043..318048,318052..318057,
318064..318066,318073..318078,318085..318087,
318094..318099,318136..318141,318148..318153,
318157..318162,318169..318174,318181..318183,
318190..318195,318202..318204,318211..318213,
318223..318225,318244..318246,318253..318255,
318265..318267,318274..318279,318286..318288,
318295..318297,318304..318309,318316..318321,
318328..318330,318337..318342,318346..318348,
318358..318363,318367..318372,318379..318381,
318388..318393,318400..318405,318412..318414,
318421..318426,318433..318435,318442..318447,
318451..318456,318463..318465,318472..318477,
318484..318489))
/locus_tag="Sbal_0282"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature complement(318178..318279)
/locus_tag="Sbal_0282"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene complement(320077..321726)
/locus_tag="Sbal_0283"
/db_xref="GeneID:4845103"
CDS complement(320077..321726)
/locus_tag="Sbal_0283"
/EC_number="1.5.5.1"
/note="PFAM: FAD dependent oxidoreductase; electron
transfer flavoprotein-ubiquinone oxidoreductase;
KEGG: shn:Shewana3_0273 electron transfer
flavoprotein-ubiquinone oxidoreductase"
/codon_start=1
/transl_table=11
/product="electron-transferring-flavoprotein
dehydrogenase"
/protein_id="YP_001048685.1"
/db_xref="GI:126172536"
/db_xref="InterPro:IPR000437"
/db_xref="InterPro:IPR003042"
/db_xref="InterPro:IPR006076"
/db_xref="InterPro:IPR007859"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:4845103"
/translation="MERESMEFDVVIVGAGPAGLATACRLMQISQDSGKEITVCVVEK
GSEVGAHILSGAVFEPKVLDELFSDWREKDAPVKTAVTHDEIYLLSSATDGRVMPNAF
VPKTMHNDGNFIISVGNLSRWLANRAEELGVEIFPGFAASELLFNVDNSVKGILIGDM
GVGADGEPKDSFMPGMELHAKYTVFSEGCRGHLGKQLIEKYHLDNGKTPQHYGLGFKE
IWKVPAEQHEQGKVVHTGGWPLTEGASGGGFLYHMEDNQIAVGLIIDLNYKNPHLSPF
DEFQRYKTHPVIAKYLTGGERLSYGARAITKGGLNSLPKMSFPGGLIIGCNAGTLNFA
KIKGTHTAMKSGIVAAETLGKAMMAGVEGGKDLDCYQTHIEESWLHEELHKSRNFGPA
MHKFGTYLGGAFNYIDQNWFGGKFPITLRDEHPDYAQMASVSAYSKIDYPKPDGKLSF
DKLSSVYLSSTYHEEDQPCHLRLKDSSIPLGINLTQFNEPAQRYCPAGVYEIVEEAGQ
PKFVINAQNCIHCKTCDIKDPSQNITWVTPEGGGGPNYPNM"
misc_feature complement(321019..321717)
/locus_tag="Sbal_0283"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(320338..321714)
/locus_tag="Sbal_0283"
/note="Dehydrogenases (flavoproteins) [Energy production
and conversion]; Region: FixC; COG0644"
/db_xref="CDD:30989"
misc_feature complement(320212..320538)
/locus_tag="Sbal_0283"
/note="Electron transfer flavoprotein-ubiquinone
oxidoreductase; Region: ETF_QO; pfam05187"
/db_xref="CDD:203194"
gene 322062..323075
/gene="moaA"
/locus_tag="Sbal_0284"
/db_xref="GeneID:4844780"
CDS 322062..323075
/gene="moaA"
/locus_tag="Sbal_0284"
/note="together with moaC, is involved in the conversion
of a guanosine derivative (GXP) into molybdopterin
precursor Z"
/codon_start=1
/transl_table=11
/product="molybdenum cofactor biosynthesis protein A"
/protein_id="YP_001048686.1"
/db_xref="GI:126172537"
/db_xref="InterPro:IPR006638"
/db_xref="InterPro:IPR007197"
/db_xref="InterPro:IPR010505"
/db_xref="InterPro:IPR013483"
/db_xref="GeneID:4844780"
/translation="MLSPPTLGKVIMSQLQDSFGRKFHYLRMSVTDVCNFKCSYCLPD
GYHPDGKPKFLSLNEIANLVSAFSQVGTQKIRITGGEPTLRKDFTDIIRVVADNPRIH
TIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKMFYQITGENKFDEVMRGIDAAL
SAGFERVKINAVLLKGLNDKDLPRFLHWIKNTPIDLRFIELMETGLGREYFEAHHLAG
ADIKAQLLADGWQLDTPSADDGPAQNFSRSDYQGRIGLIMPYATNFCASCNRLRVSAK
GKLHLCLFTESGVDLRDLLQHSSQQAELIERLHGQLAQKKATHYLHQGITGVTQHLAS
IGG"
misc_feature 322083..323072
/gene="moaA"
/locus_tag="Sbal_0284"
/note="molybdenum cofactor biosynthesis protein A;
Reviewed; Region: moaA; PRK00164"
/db_xref="CDD:178909"
misc_feature 322143..322724
/gene="moaA"
/locus_tag="Sbal_0284"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature order(322161..322163,322167..322169,322173..322175,
322179..322187,322293..322295,322299..322304,
322380..322388,322452..322454,322575..322577,
322659..322664)
/gene="moaA"
/locus_tag="Sbal_0284"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
misc_feature 322641..323021
/gene="moaA"
/locus_tag="Sbal_0284"
/note="Molybdenum Cofactor Synthesis C; Region:
Mob_synth_C; pfam06463"
/db_xref="CDD:115139"
gene 323172..323648
/gene="moaC"
/locus_tag="Sbal_0285"
/db_xref="GeneID:4842031"
CDS 323172..323648
/gene="moaC"
/locus_tag="Sbal_0285"
/note="MoaC; along with MoaA is involved in conversion of
a guanosine derivative into molybdopterin precursor Z;
involved in molybdenum cofactor biosynthesis"
/codon_start=1
/transl_table=11
/product="molybdenum cofactor biosynthesis protein MoaC"
/protein_id="YP_001048687.1"
/db_xref="GI:126172538"
/db_xref="InterPro:IPR002820"
/db_xref="GeneID:4842031"
/translation="MSNVFTHINADGNAHMVDVTEKAVTEREARAEAFIEMASTTLEM
IMSGSHHKGDVFATARIAGIQAAKKTSDLIPLCHPLMLTKVEVDLEAQPEHNRVRITS
LCKLSGKTGVEMEALTAASVAALTIYDMCKAVQKDMVISQVRLLEKRGGKSGHFKV"
misc_feature 323217..323636
/gene="moaC"
/locus_tag="Sbal_0285"
/note="MoaC family, prokaryotic and eukaryotic. Members of
this family are involved in molybdenum cofactor (Moco)
biosynthesis, an essential cofactor of a diverse group of
redox enzymes. MoaC, a small hexameric protein, converts,
together with MoaA, a guanosine...; Region: MoaC_PE;
cd01420"
/db_xref="CDD:29626"
misc_feature order(323217..323228,323331..323408,323415..323435,
323589..323624)
/gene="moaC"
/locus_tag="Sbal_0285"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:29626"
misc_feature order(323325..323333,323379..323393,323574..323582)
/gene="moaC"
/locus_tag="Sbal_0285"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29626"
misc_feature order(323325..323327,323373..323375,323394..323396,
323400..323405,323499..323501,323508..323516,
323523..323525,323556..323558,323565..323567)
/gene="moaC"
/locus_tag="Sbal_0285"
/note="putative active site [active]"
/db_xref="CDD:29626"
gene 323765..324016
/locus_tag="Sbal_0286"
/db_xref="GeneID:4845570"
CDS 323765..324016
/locus_tag="Sbal_0286"
/note="TIGRFAM: molybdopterin converting factor, subunit
1;
PFAM: thiamineS protein;
KEGG: son:SO4450 molybdenum cofactor biosynthesis protein
D"
/codon_start=1
/transl_table=11
/product="molybdopterin converting factor subunit 1"
/protein_id="YP_001048688.1"
/db_xref="GI:126172539"
/db_xref="InterPro:IPR003749"
/db_xref="InterPro:IPR010034"
/db_xref="GeneID:4845570"
/translation="MINVLFFAQVRELLGTAKLSLEASEQTQTAEALRATLAATDDKW
AKVLTSDKLLVAVNQTISQWDTPVNDGDEVAFFPPVTGG"
misc_feature 323768..324013
/locus_tag="Sbal_0286"
/note="Ubiquitin domain of MoaD-like proteins; Region:
MoaD; cd00754"
/db_xref="CDD:176354"
misc_feature order(323783..323791,323795..323800,323936..323938,
323981..323983,323996..324004,324011..324013)
/locus_tag="Sbal_0286"
/note="MoaE interaction surface [polypeptide binding];
other site"
/db_xref="CDD:176354"
misc_feature order(323783..323788,323795..323800,323996..323998,
324002..324004,324011..324013)
/locus_tag="Sbal_0286"
/note="MoeB interaction surface [polypeptide binding];
other site"
/db_xref="CDD:176354"
misc_feature 324011..324013
/locus_tag="Sbal_0286"
/note="thiocarboxylated glycine; other site"
/db_xref="CDD:176354"
gene 324018..324485
/locus_tag="Sbal_0287"
/db_xref="GeneID:4845571"
CDS 324018..324485
/locus_tag="Sbal_0287"
/note="PFAM: molybdopterin biosynthesis MoaE;
KEGG: she:Shewmr4_0276 molybdopterin biosynthesis MoaE"
/codon_start=1
/transl_table=11
/product="molybdopterin biosynthesis protein MoaE"
/protein_id="YP_001048689.1"
/db_xref="GI:126172540"
/db_xref="InterPro:IPR003448"
/db_xref="GeneID:4845571"
/translation="MRLLPAVRVQEVDFSVTDEYRQLAQDDSDGAVVTFVGKVRDFND
GAAVTDLTLEHYPGMTEAVLEQIVVEARSRWPLNKVTVIHRVGTMALGEQIVFIGVTS
AHRKAAFAACEFLIDFLKTKAPFWKLEAGEQGKSWVEAKDADEQAAKLWQHKD"
misc_feature 324066..324431
/locus_tag="Sbal_0287"
/note="MoaE family. Members of this family are involved in
biosynthesis of the molybdenum cofactor (Moco), an
essential cofactor for a diverse group of redox enzymes.
Moco biosynthesis is an evolutionarily conserved pathway
present in eubacteria, archaea and...; Region: MoaE;
cd00756"
/db_xref="CDD:58647"
misc_feature order(324078..324080,324090..324092,324105..324107,
324111..324125,324129..324131,324135..324137,
324297..324299,324324..324326,324330..324332,
324354..324356,324366..324368)
/locus_tag="Sbal_0287"
/note="MoaE homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:58647"
misc_feature order(324177..324179,324183..324185,324192..324194,
324201..324203,324213..324215,324267..324269,
324375..324380,324384..324386,324390..324398,
324426..324428)
/locus_tag="Sbal_0287"
/note="MoaD interaction [polypeptide binding]; other site"
/db_xref="CDD:58647"
misc_feature order(324375..324377,324396..324398)
/locus_tag="Sbal_0287"
/note="active site residues [active]"
/db_xref="CDD:58647"
gene 324563..325363
/locus_tag="Sbal_0288"
/db_xref="GeneID:4845424"
CDS 324563..325363
/locus_tag="Sbal_0288"
/note="TIGRFAM: molybdenum ABC transporter, periplasmic
molybdate-binding protein;
KEGG: she:Shewmr4_0277 molybdenum ABC transporter,
periplasmic molybdate-binding protein"
/codon_start=1
/transl_table=11
/product="molybdenum ABC transporter periplasmic
molybdate-binding protein"
/protein_id="YP_001048690.1"
/db_xref="GI:126172541"
/db_xref="InterPro:IPR005950"
/db_xref="InterPro:IPR011587"
/db_xref="GeneID:4845424"
/translation="MQSLTRFFHALGFALLFCLAVVPSTSRAADNAPIPAIAAAANIK
FALDDIVKNFTAETGLKVRVSYGSSGNFVAQIQHGAPFEMLQSADERYIAELNKVGFT
QGEGVQYAVGRLALVAPKNSPLALDIELNGLKALLTAGQLERFAIANPDHAPYGERAR
ELLKKLGLWDELQTKLILGENASQAAQFAISGSTQGGIIPLSLAIAPQFQALGHYLAL
PSDLHGPLNQRMALMPKASSTAERFYQYLQSDAARAVFTQYGFGLPVS"
misc_feature 324692..325345
/locus_tag="Sbal_0288"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_11; pfam13531"
/db_xref="CDD:205709"
misc_feature 324695..325342
/locus_tag="Sbal_0288"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
gene 325372..326052
/locus_tag="Sbal_0289"
/db_xref="GeneID:4844019"
CDS 325372..326052
/locus_tag="Sbal_0289"
/note="TIGRFAM: molybdate ABC transporter, inner membrane
subunit;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: shm:Shewmr7_3743 molybdate ABC transporter, inner
membrane subunit"
/codon_start=1
/transl_table=11
/product="molybdate ABC transporter inner membrane
subunit"
/protein_id="YP_001048691.1"
/db_xref="GI:126172542"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR011867"
/db_xref="GeneID:4844019"
/translation="MDWQALWLSVKLSSITVLVLIPLAILAGRALAYRQFVGKSWVEA
LIMVPLVLPPTVIGYYLLVGLGSQSWLGQWIEQLTGQQLVFHFSGLVIASVFVNIPFA
VQPIQRAFEAVPNDVRDAAACCGMSRLKILLKIELPMVWPGVLTALVLCFSHVLGEFG
VVLMMGGNIAGETKTISISIYDSVQAFDFNAAGTMSLVLLLFAVTALALTTSLSRRLG
GQRGANHR"
misc_feature <325378..325947
/locus_tag="Sbal_0289"
/note="ABC-type sulfate transport system, permease
component [Posttranslational modification, protein
turnover, chaperones]; Region: CysU; COG0555"
/db_xref="CDD:30901"
misc_feature 325387..325947
/locus_tag="Sbal_0289"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(325435..325440,325447..325452,325465..325467,
325495..325506,325510..325539,325546..325551,
325555..325557,325654..325659,325666..325668,
325672..325674,325681..325686,325690..325692,
325702..325707,325714..325716,325765..325767,
325807..325812,325819..325821,325840..325851,
325858..325863,325900..325905,325933..325938,
325945..325947)
/locus_tag="Sbal_0289"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(325513..325557,325840..325857)
/locus_tag="Sbal_0289"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(325555..325557,325639..325641,325858..325860,
325894..325896,325903..325905,325933..325935)
/locus_tag="Sbal_0289"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(325717..325755,325771..325776,325786..325788)
/locus_tag="Sbal_0289"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 326033..327136
/locus_tag="Sbal_0290"
/db_xref="GeneID:4842558"
CDS 326033..327136
/locus_tag="Sbal_0290"
/note="PFAM: ABC transporter related;
SMART: AAA ATPase;
KEGG: shn:Shewana3_0280 ABC transporter related"
/codon_start=1
/transl_table=11
/product="ABC transporter-like protein"
/protein_id="YP_001048692.1"
/db_xref="GI:126172543"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:4842558"
/translation="MAQIIADLQCQIQNHKHIKLNADFRCKAGEVLAVVGPSGGGKTT
LLRMIAGLNHPDTGQIYFGERPWFDDKALIALSPQQRHIGYMPQHFGLFPNLTALENV
VAGLDHIPKSERIVRAKDWLERVNLQGLPDRLPAHLSGGQRQRVALARALAREPSVLL
LDEPFSAVDRETRERLYLELARLKEQLLCPVIMVTHDLNEALLLADSMILISQGKMLQ
QGAPFEVLSRPRNEAVARQMGLRNIFDGEVVFQDSTKDLTWLKFGEQLIACDYGKDRA
VGSKVRWVIPNQGIRFNSISNGRLCRSFNKLDVTIDAMLVMGESVRLICYVTGTQLQL
NTEVSLHFAQKLALTKGMQTTVALKSEQIHILE"
misc_feature 326060..326692
/locus_tag="Sbal_0290"
/note="ABC Carbohydrate and Solute Transporters-like
subgroup. This family is comprised of proteins involved
in the transport of apparently unrelated solutes and
proteins specific for di- and oligosaccharides and
polyols. ABC transporters are a large family...; Region:
ABC_Carb_Solutes_like; cd03259"
/db_xref="CDD:73018"
misc_feature 326093..327133
/locus_tag="Sbal_0290"
/note="ABC-type spermidine/putrescine transport systems,
ATPase components [Amino acid transport and metabolism];
Region: PotA; COG3842"
/db_xref="CDD:33633"
misc_feature 326138..326161
/locus_tag="Sbal_0290"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73018"
misc_feature order(326147..326152,326156..326164,326294..326296,
326516..326521,326618..326620)
/locus_tag="Sbal_0290"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73018"
misc_feature 326285..326296
/locus_tag="Sbal_0290"
/note="Q-loop/lid; other site"
/db_xref="CDD:73018"
misc_feature 326444..326473
/locus_tag="Sbal_0290"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73018"
misc_feature 326504..326521
/locus_tag="Sbal_0290"
/note="Walker B; other site"
/db_xref="CDD:73018"
misc_feature 326528..326539
/locus_tag="Sbal_0290"
/note="D-loop; other site"
/db_xref="CDD:73018"
misc_feature 326606..326626
/locus_tag="Sbal_0290"
/note="H-loop/switch region; other site"
/db_xref="CDD:73018"
gene complement(327151..327312)
/locus_tag="Sbal_0291"
/db_xref="GeneID:4842618"
CDS complement(327151..327312)
/locus_tag="Sbal_0291"
/note="KEGG: son:SO4430 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048693.1"
/db_xref="GI:126172544"
/db_xref="GeneID:4842618"
/translation="MKPVTRWISLSLLLVAAFSAYAYGSSTSALVFIILGMLLEGTFW
IGLLGKKRH"
gene 327806..328327
/locus_tag="Sbal_0292"
/db_xref="GeneID:4843056"
CDS 327806..328327
/locus_tag="Sbal_0292"
/note="KEGG: shn:Shewana3_0281 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048694.1"
/db_xref="GI:126172545"
/db_xref="GeneID:4843056"
/translation="MRLWLLGFMLVSGVATATQSMYSMFAGGDYVPPLSVMQQIEKGF
SGVIAEFNMEEQEGELVYQFELINPLANSITRFEYRARDGKLLKQKASKVSADDLGEV
EATRLIAAKDQTFSGLIAKATKDHKAFLTEAKLDHDLGISYLELKLLDDTGKFKLAFD
VENLRPLPLLKWD"
gene 328388..329065
/locus_tag="Sbal_0293"
/db_xref="GeneID:4845611"
CDS 328388..329065
/locus_tag="Sbal_0293"
/note="PFAM: response regulator receiver; transcriptional
regulator domain protein;
KEGG: shn:Shewana3_0282 two component transcriptional
regulator, winged helix family"
/codon_start=1
/transl_table=11
/product="two component transcriptional regulator"
/protein_id="YP_001048695.1"
/db_xref="GI:126172546"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:4845611"
/translation="MKILLVEDDATTIDYIVKGFLEQGHNIETASDGHQGLSLATSSQ
YDLVILDRMLPQLDGLKLLAALRATGNQTPVLILSALAHVDERVKGLRAGGDDYMTKP
FAFSELLVRAEKLMHRGQSVPVTTDLVVGGLKMELLTRNVTLDGQELMLQPKEFQLLK
YLMEHANQVISRTLLFEAVWDYHFDPRTNVIDVHIAKLRRKFEELGHGELIETVRGAG
YRLRQRH"
misc_feature 328388..329062
/locus_tag="Sbal_0293"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature 328397..328735
/locus_tag="Sbal_0293"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(328406..328411,328538..328540,328562..328564,
328622..328624,328679..328681,328688..328693)
/locus_tag="Sbal_0293"
/note="active site"
/db_xref="CDD:29071"
misc_feature 328538..328540
/locus_tag="Sbal_0293"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(328547..328552,328556..328564)
/locus_tag="Sbal_0293"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 328688..328696
/locus_tag="Sbal_0293"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 328769..329050
/locus_tag="Sbal_0293"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature order(328841..328843,328898..328903,328955..328957,
328964..328966,328988..328993,329024..329026,
329039..329041)
/locus_tag="Sbal_0293"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 329115..330371
/locus_tag="Sbal_0294"
/db_xref="GeneID:4842444"
CDS 329115..330371
/locus_tag="Sbal_0294"
/note="PFAM: ATP-binding region, ATPase domain protein
domain protein; histidine kinase, HAMP region domain
protein; histidine kinase A domain protein domain protein;
KEGG: son:SO4427 sensor histidine kinase"
/codon_start=1
/transl_table=11
/product="integral membrane sensor signal transduction
histidine kinase"
/protein_id="YP_001048696.1"
/db_xref="GI:126172547"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:4842444"
/translation="MTVIIGALLFALYRQLIIEQQYQVTQYLESETQRYQQLALTVDR
RSFAAQIRAADPQTALIAWRNSYDMVGALSFMPEGMPMLPQTRDFPILTGGPDKLHIL
TGGLVMTRYGPVLIATRTDNLATLIDKFISAAATAVMLTIVLTLALGYLFSKAILRRL
VQYNRLSEQIERGHYDTRLPLSWRQDEFDMLALQFNNVLDILENNLMAVRGATDNIAH
DLRTPLSHIRIGLEELASKPSDEISEGCAILTEELDHCLATFDAMLSLTRIEEGQQTL
DLQELSLAQLCTDLLDMADAVAESNEQTLSLSLLADHKVFGDKYLLFQALYNLVDNAM
KYSGQGARIEIIQSGPQIQIRDNGPGIPDDSKERVFERLVRLDPSRHLQGTGLGLSMV
KAILSRHNAKINLTDNHPGLVVTIKF"
misc_feature 329454..330368
/locus_tag="Sbal_0294"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature 329514..329726
/locus_tag="Sbal_0294"
/note="HAMP domain; Region: HAMP; pfam00672"
/db_xref="CDD:189662"
misc_feature order(329580..329585,329592..329597,329601..329606,
329613..329618,329622..329624,329673..329678,
329682..329687,329694..329699,329703..329708,
329715..329720)
/locus_tag="Sbal_0294"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature 329757..329918
/locus_tag="Sbal_0294"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(329760..329762,329772..329774,329781..329783,
329793..329795,329802..329804,329847..329849,
329859..329861,329868..329870,329880..329882,
329889..329891,329901..329903)
/locus_tag="Sbal_0294"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 329766..329768
/locus_tag="Sbal_0294"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 330078..330368
/locus_tag="Sbal_0294"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(330096..330098,330108..330110,330117..330119,
330174..330176,330180..330182,330186..330188,
330192..330197,330270..330281,330327..330329,
330333..330335,330345..330350,330354..330356)
/locus_tag="Sbal_0294"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 330108..330110
/locus_tag="Sbal_0294"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(330186..330188,330192..330194,330270..330272,
330276..330278)
/locus_tag="Sbal_0294"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 330405..331097
/locus_tag="Sbal_0295"
/db_xref="GeneID:4842445"
CDS 330405..331097
/locus_tag="Sbal_0295"
/note="TIGRFAM: pseudouridine synthase Rlu family protein,
TIGR01621;
PFAM: pseudouridine synthase;
KEGG: shn:Shewana3_0284 pseudouridine synthase Rlu family
protein, TIGR01621"
/codon_start=1
/transl_table=11
/product="pseudouridine synthase Rlu family protein"
/protein_id="YP_001048697.1"
/db_xref="GI:126172548"
/db_xref="InterPro:IPR006145"
/db_xref="InterPro:IPR006224"
/db_xref="InterPro:IPR006508"
/db_xref="GeneID:4842445"
/translation="MYRIIADEADFIVISKSAKVHFHSQDGTAGVVAQAEQDLGIKLF
AVHRLDTPTSGLLILAKSAVAAKQFTELFTAHKVQKYYLALAKGKPKKKQGWVIGDMA
KSRRSMFKLLRTKENPAITQFFSLSVSEGLRLYLLKPHSGKTHQLRVALASLGVPILG
DDLYGGMAADRCYLHAYCLHFRYGDEATGWRDYAYRDVPTQGEHFAAEGVIEALVEWF
EPNTLAWPAKGD"
misc_feature <330411..330950
/locus_tag="Sbal_0295"
/note="Pseudouridylate synthases, 23S RNA-specific
[Translation, ribosomal structure and biogenesis]; Region:
RluA; COG0564"
/db_xref="CDD:30910"
misc_feature 330435..330947
/locus_tag="Sbal_0295"
/note="Pseudouridine synthase, RsuA/RluD family; Region:
PseudoU_synth_RluCD_like; cd02869"
/db_xref="CDD:211346"
misc_feature order(330543..330554,330846..330848)
/locus_tag="Sbal_0295"
/note="active site"
/db_xref="CDD:211346"
gene complement(331125..332294)
/locus_tag="Sbal_0296"
/db_xref="GeneID:4845160"
CDS complement(331125..332294)
/locus_tag="Sbal_0296"
/note="TIGRFAM: diguanylate cyclase;
PFAM: GGDEF domain containing protein;
KEGG: son:SO4425 GGDEF family protein"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase"
/protein_id="YP_001048698.1"
/db_xref="GI:126172549"
/db_xref="InterPro:IPR000160"
/db_xref="GeneID:4845160"
/translation="MIFDPQALLLIKFICLLASTAAVAWGLIAKPLQIATQASMRFSL
ANLFVLLGIILNSQRSEASSYLFWFCSDMAILFGFILLRWGTKALFRLSPSVKSDLFL
LAITASVMLSVPPNFSSERTLAVVFSACAALIFTMLTRDNYQAIKRDTGNRVAIAMVM
PLVAMVGIFIIRIFIALLSPEESPMFIAMHTHEAIPVLWFYVFLTLLINIVMIGNAMT
RLVSKIRMLAERDQLTGLWNRRAMHKFLNNIHQRWLRDNVPYSMILLDLDHFKEINDQ
YGHDAGDLALLTAARLFGSVLRENDALCRHGGEEFLVILPATDAPAARAVAEKLHQVL
KDNSFIWQGVTIKIHASLGYATIYQGCQPDKLLIQADQAMYRAKSEGRDRICQAC"
misc_feature complement(331137..331607)
/locus_tag="Sbal_0296"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(331368..331370,331497..331499))
/locus_tag="Sbal_0296"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(331365..331376,331380..331382,
331446..331448,331458..331460,331470..331475,
331482..331484))
/locus_tag="Sbal_0296"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(331308..331310,331392..331394))
/locus_tag="Sbal_0296"
/note="I-site; other site"
/db_xref="CDD:143635"
gene 332558..332725
/locus_tag="Sbal_0297"
/db_xref="GeneID:4843057"
CDS 332558..332725
/locus_tag="Sbal_0297"
/note="PFAM: protein of unknown function UPF0057;
KEGG: shn:Shewana3_0285 protein of unknown function
UPF0057"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048699.1"
/db_xref="GI:126172550"
/db_xref="InterPro:IPR000612"
/db_xref="GeneID:4843057"
/translation="MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLLFWFPG
LLHALWVVTKA"
misc_feature <332618..332719
/locus_tag="Sbal_0297"
/note="Proteolipid membrane potential modulator; Region:
Pmp3; pfam01679"
/db_xref="CDD:201919"
gene complement(332798..334975)
/locus_tag="Sbal_0298"
/db_xref="GeneID:4843854"
CDS complement(332798..334975)
/locus_tag="Sbal_0298"
/note="PFAM: TonB-dependent receptor; TonB-dependent
receptor, plug;
KEGG: she:Shewmr4_0286 TonB-dependent receptor"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_001048700.1"
/db_xref="GI:126172551"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR012910"
/db_xref="GeneID:4843854"
/translation="MTFKTSFVALAVFAALSQSAAAQDAPDSSSNNKNKDIEKITVTA
SRMDKSPSSIPNTVTIIDRAQLEEQFRTTKDLSTIIGNLAPSFSPSRQKMSNTGETLR
GRPPLIMIDGVPQSNPLRSGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYIT
KKPTGDSEQVASFDVTVPDSMKSNGLSFGASYAFSGESEFIDMIGSVSYRNNGVYYDA
NHNVVGVDTTQGESMDSQSTDFFIKLGHNFDESRLELMVNHYTADNNGDWMPVAGDKP
NGVPTGAVKETQPWEAANNQVTTTSLTYTHANIGGQQLNLQLFNQDFKAVYGGGCFDS
FYDPSFEGSDQVIQCGVGSKGESLYYEQSRNASVKWGLKSSLIAKDIAGSGIDAAYGV
DLFRDTTEQDLVKTGFSWVPESTYDNVAPYLQLDYDLIENLTLSTGVRYEHAELSVDD
YKTLWGAGNKQIAGGSATFDETLFNVGISYKITPDIRVYTSYNQGFGMPDIGRILRDG
KSFPGDNPNIDDSLALTPIVTDNVEVGADYQGKYLSAKFAYYRSATDFGSRLALNGDG
FYDVKREKSMIEGIEANVTAYLTSNDDLGMNIAIQQGEYDSNGDNKVDTDLDGANISP
NRINLFWTHNFDNDMSTRVQANYYMDRDFKNAAGNKYAEFDGYTTVDASFSMPLYTGT
LSLGLQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIGYTLPF"
misc_feature complement(332801..334816)
/locus_tag="Sbal_0298"
/note="TonB-dependent siderophore receptor; Region:
TonB-siderophor; TIGR01783"
/db_xref="CDD:162535"
misc_feature complement(332801..334807)
/locus_tag="Sbal_0298"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(334496..334522,334553..334585,
334631..334654,334664..334681,334712..334741,
334778..334807))
/locus_tag="Sbal_0298"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(333893..333895,333974..333976))
/locus_tag="Sbal_0298"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 335369..335605
/locus_tag="Sbal_0299"
/db_xref="GeneID:4842522"
CDS 335369..335605
/locus_tag="Sbal_0299"
/note="KEGG: shm:Shewmr7_3732 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048701.1"
/db_xref="GI:126172552"
/db_xref="GeneID:4842522"
/translation="MSGVQVEGYNRAPLSRIRIGALMNRKKKINQTLKSKAKKANAKL
QSSNKPKYIAKADREASAAVADTESYTVDSVIVV"
misc_feature 335435..335566
/locus_tag="Sbal_0299"
/note="Protein of unknown function (DUF2986); Region:
DUF2986; pfam11661"
/db_xref="CDD:204703"
gene complement(335664..336176)
/locus_tag="Sbal_0300"
/db_xref="GeneID:4841511"
CDS complement(335664..336176)
/locus_tag="Sbal_0300"
/note="PFAM: peptidase M23B;
KEGG: son:SO4420 peptidase, M23/M37 family"
/codon_start=1
/transl_table=11
/product="peptidase M23B"
/protein_id="YP_001048702.1"
/db_xref="GI:126172553"
/db_xref="InterPro:IPR002886"
/db_xref="GeneID:4841511"
/translation="MKLTYVGLALSLLLLGGYLIPESPVIPVKGASSKDWNSQTFWYE
PWGPSGVHKGIDIFAAKNTAMIAPTPMLIFYRGDFFKGGNVVVGLGPKWQIHYFAHLA
QIESATGLIAYQGETLGTVGDTGNAQGKPPHLHYSILSLLPKPWLIDTSTQGYKKAFY
QNPISYLEAR"
misc_feature complement(335730..>336107)
/locus_tag="Sbal_0300"
/note="Membrane proteins related to metalloendopeptidases
[Cell envelope biogenesis, outer membrane]; Region: NlpD;
COG0739"
/db_xref="CDD:31082"
misc_feature complement(335763..336029)
/locus_tag="Sbal_0300"
/note="Peptidase family M23; Region: Peptidase_M23;
pfam01551"
/db_xref="CDD:201854"
gene complement(336216..336818)
/locus_tag="Sbal_0301"
/db_xref="GeneID:4843415"
CDS complement(336216..336818)
/locus_tag="Sbal_0301"
/note="KEGG: shn:Shewana3_0289 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048703.1"
/db_xref="GI:126172554"
/db_xref="GeneID:4843415"
/translation="MVALMSVLTWLKKHLHSAFHGNSTLERQADLAAIFHPAQMPDID
LPTNQAYPLVTPILQADIYAYQVHGLLTLEGKQTLDTLIGNAGFAVLPEHAASFNGLL
THRSRATSLQLNQYADFAGICVSLISNDKALLEQLIAFKSTLPHPWESFPDVDPDTLG
SLQGNIDFWCNYFWRPYWLSLSAAERLQYPVNWQEFSDFH"
gene complement(337294..338637)
/locus_tag="Sbal_0302"
/db_xref="GeneID:4845144"
CDS complement(337294..338637)
/locus_tag="Sbal_0302"
/note="functions in anaerobic transport of
C4-dicarboxylate compounds such as fumarate; similar to
DcuA; DcuA and DcuB function as independent and mutually
redundant C4-dicarboxylate (aspartate, malate, fumarate
and succinate) transporters"
/codon_start=1
/transl_table=11
/product="anaerobic C4-dicarboxylate transporter"
/protein_id="YP_001048704.1"
/db_xref="GI:126172555"
/db_xref="InterPro:IPR004668"
/db_xref="GeneID:4845144"
/translation="MILMEFIVVLSCLLLGTRYGGMGLGLISGIGLFLLIFVFGLAPG
QPPVQVMLTILAVIGCAAVLQTAGGLDVMMQFAERLLRRHPQYITILAPLTTWTLTFL
CGTGHVVYTMFPIISDIALKKNIRPERPMAVASVASQMAICASPVSVAVVSMVSILAS
QQGVGRAYNLLEILMVSVPASLCGVMAAALWSLRRGKDLDKDEEFQERIQDPVQRAFI
YDKSETLLNQRFPKEAYWATGIFFAAIAAVVLLGSFSELRPAFEVKGKTTLLSMNLVI
QMMMLIAGAFILMTCKVKPTNISNGPVFKAGMVAIFSVFGVAWMSDTFFISHMDVLKE
NLSHVVQSQPWTYALVLFLISKLVNSQAAALTAIAPMGLALGVDPKLLIAFLPASYGY
FVLPTYPSDLACIGFDRSGTTKIGKFIINHSFIIPGFIGVGTASTVGYLLATALL"
misc_feature complement(337297..338637)
/locus_tag="Sbal_0302"
/note="anaerobic C4-dicarboxylate transporter; Reviewed;
Region: PRK12489"
/db_xref="CDD:183554"
gene 338903..340081
/locus_tag="Sbal_0303"
/db_xref="GeneID:4845145"
CDS 338903..340081
/locus_tag="Sbal_0303"
/note="KEGG: son:SO4414 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048705.1"
/db_xref="GI:126172556"
/db_xref="GeneID:4845145"
/translation="MKPATFNTEAFDDWIRSRFVELNSELEQLYYQQTDRANVLDIGA
EAKLALESEGRELITALLDEGNTDEGFDSAFDLLGNVGLYMAACRRHEITEPSRETTS
PLAEASALAMHIGASIGVTPRFATAHLTTHNRAHNGIYKRFTDLPAEKLFVDYNTKGI
LAYKRAADALLKIQPLGISHPICHDLLRVAKQALQDVIESNTQLFNRLDTDRFFYCVR
PYYKPYRVGSVIYRGANAGDFAGINVIDLTLGLCFANEASYSQMLVDKFLYMMPEDQQ
ILRECMRRPNLMDDFLQAKDSANQTWYQENLRLFIEVCELHGETAIQHHNELVTKYIA
EPSTSMEQQHLAKVTASGPPLHVLLGSLERLRDRRAAAQRSDIRTRYYEIKKLKESLR
"
misc_feature 338915..340075
/locus_tag="Sbal_0303"
/note="Domain of unknown function (DUF1864); Region:
DUF1864; pfam08933"
/db_xref="CDD:204099"
gene 340086..341207
/locus_tag="Sbal_0304"
/db_xref="GeneID:4844026"
CDS 340086..341207
/locus_tag="Sbal_0304"
/note="PFAM: aminotransferase, class V;
KEGG: shn:Shewana3_0295 aminotransferase, class V"
/codon_start=1
/transl_table=11
/product="class V aminotransferase"
/protein_id="YP_001048706.1"
/db_xref="GI:126172557"
/db_xref="InterPro:IPR000192"
/db_xref="GeneID:4844026"
/translation="MFEDFKKDFYLAGPGYLLNHSVGRPLKSTEQVFKEAFFAPWQES
GREPWGQWLSVIDDFTFALSKLFNGHQKDFCPQVNLSSALTKIVMSLDRLNREHAVVL
MSEIDFPSMGFALKKALPASCEVRFIPKGLDVTDPNVWDAHISRDVDLVFVSHAYSNT
GQQAPLANIFTIARERGCLSLVDVAQSAGIIPLDLARLQPDFLIGSSVKWLCGGPGAA
YLWVNPAILESCQPKDVGWFSHENPFEFDIHDFRYQHSAMRFWGGTPSIAPYAIAAHS
IHYLAGLGIPLLRKCNQQLIDAVAQELEHEFVSPRDVEKRSGTLILQFGEQQHQIMTA
FANANISVDARSMGIRISPHIYNNMADIKLLLDVIKANR"
misc_feature 340089..341198
/locus_tag="Sbal_0304"
/note="Selenocysteine lyase/Cysteine desulfurase
[Posttranslational modification, protein turnover,
chaperones]; Region: csdA; COG0520"
/db_xref="CDD:30866"
misc_feature 340110..341198
/locus_tag="Sbal_0304"
/note="Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the...; Region: AAT_I;
cl00321"
/db_xref="CDD:213094"
misc_feature order(340548..340550,340632..340634,340641..340643,
340701..340703,340710..340712)
/locus_tag="Sbal_0304"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99742"
misc_feature 340710..340712
/locus_tag="Sbal_0304"
/note="catalytic residue [active]"
/db_xref="CDD:99742"
gene complement(341270..342466)
/locus_tag="Sbal_0305"
/db_xref="GeneID:4841601"
CDS complement(341270..342466)
/locus_tag="Sbal_0305"
/note="PFAM: sodium:dicarboxylate symporter;
KEGG: shm:Shewmr7_3722 sodium:dicarboxylate symporter"
/codon_start=1
/transl_table=11
/product="sodium:dicarboxylate symporter"
/protein_id="YP_001048707.1"
/db_xref="GI:126172558"
/db_xref="InterPro:IPR001991"
/db_xref="GeneID:4841601"
/translation="MWQKIKPYKDSIVLLTALLLGGVLGVGLPELALKLKPLGQIFLN
LLFMIIVPLVAISVTSSIARMTDLKKLGALLVSIMAVSIVMAIIPAVGIIGLALFFDP
AQGVTLDLNQTISDTAGTMDFVGLLTTNDFSGLLSKSNILALIIMSVIAGIAIGQSGE
DGRKVSALLDSFNTVIMKIVSIIMVAAPVGLGAYFASTMASQDPQLVITFARAVGLFM
VACFIYLTVGSTFYAWLGGGTQGVKQFWRFALEPAVTALGTTSSLATLPVTLRTALKM
GIKPEIADISLPLLVNLNKGGASIITALKIVFIYSLLRLDFTVDVFMVTILISVLSAF
IIGGVPGGAFLGEIFIVTTLGLPMETIPILVVIGAITDAPSTVINVVHDLNACQIIER
LNRKRL"
misc_feature complement(341279..342364)
/locus_tag="Sbal_0305"
/note="Na+/H+-dicarboxylate symporters [Energy production
and conversion]; Region: GltP; COG1301"
/db_xref="CDD:31492"
misc_feature complement(341288..342364)
/locus_tag="Sbal_0305"
/note="Sodium:dicarboxylate symporter family; Region: SDF;
pfam00375"
/db_xref="CDD:201189"
gene complement(342727..344136)
/gene="glnA"
/locus_tag="Sbal_0306"
/db_xref="GeneID:4843061"
CDS complement(342727..344136)
/gene="glnA"
/locus_tag="Sbal_0306"
/EC_number="6.3.1.2"
/note="forms a homododecamer; forms glutamine from ammonia
and glutamate with the conversion of ATP to ADP and
phosphate; also functions in the assimilation of ammonia;
highly regulated protein controlled by the
addition/removal of adenylyl groups by adenylyltransferase
from specific tyrosine residues; addition of adenylyl
groups results in inactivation of the enzyme"
/codon_start=1
/transl_table=11
/product="glutamine synthetase"
/protein_id="YP_001048708.1"
/db_xref="GI:126172559"
/db_xref="InterPro:IPR001637"
/db_xref="InterPro:IPR004809"
/db_xref="InterPro:IPR008146"
/db_xref="InterPro:IPR008147"
/db_xref="GeneID:4843061"
/translation="MSVESVLKQLEELEVKFVDLRFTDTKGKEQHVSIPSHQVDADFF
EDGKMFDGSSIAGWKGINESDMVLMPDPTTFVLDPFTEETTALIRCDILEPGTMTGYD
RDPRSIAKKAEAYLISTGIADTVLIGPEPEFFLFDDVRFGTDMSGCFVKIDAKEAAWN
SGTSYEGGNTGHRPFTKGGYFPVAPVDSSQDLRSAMCLVLEEMGQVVEAHHHEVATAG
QNEIATRFNTLTKKADEIQILKYVVHNMAHAYGKTATFMPKPIVGDNGSGMHVHQSLA
KDGVNLFAGDKYAGLSETALYYIGGIIKHARALNAFTNPSTNSYKRLVPHFEAPVMLA
YSARNRSASIRIPVVPSPKGRRIEARFPDPHANPYLGFAALLMAGLDGIQNKIHPGEA
MDKDLYDLPPEEAAEIPQVATSLENALENLQADHEFLTKGGVFSEDFIQSYIVLKTAE
AERVARTTHPLEFEMYYSL"
misc_feature complement(342730..344136)
/gene="glnA"
/locus_tag="Sbal_0306"
/note="glutamine synthetase; Provisional; Region: glnA;
PRK09469"
/db_xref="CDD:181884"
misc_feature complement(343852..344097)
/gene="glnA"
/locus_tag="Sbal_0306"
/note="Glutamine synthetase, beta-Grasp domain; Region:
Gln-synt_N; pfam03951"
/db_xref="CDD:202826"
misc_feature complement(343000..343833)
/gene="glnA"
/locus_tag="Sbal_0306"
/note="Glutamine synthetase, catalytic domain; Region:
Gln-synt_C; pfam00120"
/db_xref="CDD:201016"
gene 345142..346971
/locus_tag="Sbal_0307"
/db_xref="GeneID:4843309"
CDS 345142..346971
/locus_tag="Sbal_0307"
/note="TIGRFAM: small GTP-binding protein; GTP-binding
protein TypA;
PFAM: elongation factor G domain protein; protein
synthesis factor, GTP-binding; elongation factor Tu,
domain 2 protein;
KEGG: sdn:Sden_3455 GTP-binding protein TypA"
/codon_start=1
/transl_table=11
/product="GTP-binding protein TypA"
/protein_id="YP_001048709.1"
/db_xref="GI:126172560"
/db_xref="InterPro:IPR000640"
/db_xref="InterPro:IPR000795"
/db_xref="InterPro:IPR004161"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR006298"
/db_xref="GeneID:4843309"
/translation="MVRGLSVLENLRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEA
TERVMDSNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVLSMVDSVL
LLVDAVDGPMPQTRFVTKKAFAQGLKPIVVINKIDRPGARPDWVIDQVFDLFDNLGAT
DEQLDFPIVYASALNGFATLDPDVASDDMTPLFQTIVEKVSFPDADAEGSFQMQISQI
DYNSYVGVIGIGRIKRGSVKTNQQVTIIGADGKTRNGKMGQVLGYMGLDRTEVEIANA
GDIVAITGLGELKISDTICAVGAVEAMPALTVDEPTLTMTFQVNTSPFAGKEGKYVTS
RNILERLQTELVHNVALRVEETESPDRFRVSGRGELHLSILIENMRREGYELAVSRPE
VILKTIDGELCEPYETLTVDVEEEDQGTVIEKLGTRKAEMKDMQLDGKGRVRIDFIIP
SRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGGDIGQRANGVLISNATGKALTFALF
GLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQLTNMRASGTDEAQVLTTP
ITMTLEQALEFIDDDELVEVTPKNIRVRKRHLTENDRKRFNRA"
misc_feature 345166..346968
/locus_tag="Sbal_0307"
/note="Predicted membrane GTPase involved in stress
response [Signal transduction mechanisms]; Region: TypA;
COG1217"
/db_xref="CDD:31410"
misc_feature 345169..345750
/locus_tag="Sbal_0307"
/note="Tyrosine phosphorylated protein A (TypA)/BipA
family belongs to ribosome-binding GTPases; Region:
TypA_BipA; cd01891"
/db_xref="CDD:206678"
misc_feature 345193..345216
/locus_tag="Sbal_0307"
/note="G1 box; other site"
/db_xref="CDD:206678"
misc_feature order(345196..345198,345202..345204,345214..345219,
345226..345228,345235..345240,345334..345339,
345391..345396,345463..345468,345574..345576,
345586..345588)
/locus_tag="Sbal_0307"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206678"
misc_feature order(345202..345219,345541..345546,345550..345552,
345655..345663)
/locus_tag="Sbal_0307"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206678"
misc_feature 345301..345336
/locus_tag="Sbal_0307"
/note="Switch I region; other site"
/db_xref="CDD:206678"
misc_feature 345322..345324
/locus_tag="Sbal_0307"
/note="G2 box; other site"
/db_xref="CDD:206678"
misc_feature 345379..345390
/locus_tag="Sbal_0307"
/note="G3 box; other site"
/db_xref="CDD:206678"
misc_feature 345385..345441
/locus_tag="Sbal_0307"
/note="Switch II region; other site"
/db_xref="CDD:206678"
misc_feature 345541..345552
/locus_tag="Sbal_0307"
/note="G4 box; other site"
/db_xref="CDD:206678"
misc_feature 345655..345663
/locus_tag="Sbal_0307"
/note="G5 box; other site"
/db_xref="CDD:206678"
misc_feature 345772..346029
/locus_tag="Sbal_0307"
/note="BipA_TypA_II: domain II of BipA (also called TypA)
having homology to domain II of the elongation factors
(EFs) EF-G and EF-Tu. BipA is a highly conserved protein
with global regulatory properties in Escherichia coli.
BipA is phosphorylated on a...; Region: BipA_TypA_II;
cd03691"
/db_xref="CDD:58082"
misc_feature 346351..346587
/locus_tag="Sbal_0307"
/note="BipA_TypA_C: a C-terminal portion of BipA or TypA
having homology to the C terminal domains of the
elongation factors EF-G and EF-2. A member of the ribosome
binding GTPase superfamily, BipA is widely distributed in
bacteria and plants. BipA is a highly...; Region:
BipA_TypA_C; cd03710"
/db_xref="CDD:58063"
gene complement(347260..348282)
/locus_tag="Sbal_0308"
/db_xref="GeneID:4841512"
CDS complement(347260..348282)
/locus_tag="Sbal_0308"
/note="TIGRFAM: diguanylate cyclase;
PFAM: GGDEF domain containing protein;
KEGG: son:SO4407 GGDEF family protein"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase"
/protein_id="YP_001048710.1"
/db_xref="GI:126172561"
/db_xref="InterPro:IPR000160"
/db_xref="GeneID:4841512"
/translation="MRPNRQQLIRSLFDEYIEMYSSRDNRLTHRFSENFSGYAGSSDL
LVNNRKEWMRITRQDFAQVPERIHIEMLDLSLQDLADNLVVVTAFFHIHLPIPNPMLS
RETARLVLIFRLEHKDWMIAHSGISIPYGLAHKGEIYPIAQLEERNVELESMIKARTC
ELAEANRQLEILSNTDSLTNIGNRRLFDMMLQTEWSRGQRSNSSLALIMLDIDHFKQF
NDHYGHLAGDDCLKQLASTLSQSGRRAGELVARYGGEEFVILLPNIDKQTVLDTAQHI
HQLIQAIAIPHADTDLGIVPVSAGVAYLQPSNQQNALELVRQADAALYRAKSAGRNCI
RVMNEK"
misc_feature complement(347890..348258)
/locus_tag="Sbal_0308"
/note="SnoaL-like domain; Region: SnoaL_3; pfam13474"
/db_xref="CDD:205652"
misc_feature complement(347278..347763)
/locus_tag="Sbal_0308"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(347518..347520,347650..347652))
/locus_tag="Sbal_0308"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(347515..347526,347530..347532,
347599..347601,347611..347613,347623..347628,
347635..347637))
/locus_tag="Sbal_0308"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(347452..347454,347542..347544))
/locus_tag="Sbal_0308"
/note="I-site; other site"
/db_xref="CDD:143635"
gene complement(348471..350363)
/locus_tag="Sbal_0309"
/db_xref="GeneID:4841819"
CDS complement(348471..350363)
/locus_tag="Sbal_0309"
/note="PFAM: sulfatase;
KEGG: lbl:LBL_1125 alkaline phosphatase"
/codon_start=1
/transl_table=11
/product="sulfatase"
/protein_id="YP_001048711.1"
/db_xref="GI:126172562"
/db_xref="InterPro:IPR000917"
/db_xref="GeneID:4841819"
/translation="MKQSKFRSVLFLYISMLFILNCSRIANYIVYRDYYKETLDLLTV
IFTSFRFDIMTTGYVMLIPTLLILVPGSGRIATFIKGMGLKLGLIMLLLSTLALIGDF
IYFGVVNRHTFSDLPLLMTETSFVLPFLVKDHLALTILSFAIIILAIIFLIKKYQLFF
HNNQKHRTLASQISVFIIAIPVLILFLRGLNLHGKPLGIIDAYKNQSEQQANLILNGI
YTGGKGTTQIFKRTDYNFFSSEEIKQHLNKTEDEAYKYPFLSQFPENTPNGRNLVIIL
VEALSYAYIDGLSGSDYKVTPFLDELSKKAEVYDNFYAAAQRSNLGVQASLFGLPPLE
SVGYIGGGLELSRLTKIGNIAQAHGYQTQMLQSSKRDSIRLDSIANYAGFQQYLGRSD
IPITRTDYPDPDGAQFGWDYEMLMKTLELANKKTQPFISFSFTGTTHMPYVETPKHLQ
VYPYGQDTFTDFLNTVRYTDEALKAFFAEASKQDWYENTTFMILADHTLFNTKNPGLE
SAFHIPLWIYRPGQNITPKRHKILASQLDILPTAFDLLGFNDEFASVGRSLYRERKPY
SIVVKGDLLGAFTNSGNFLIAGDKIISESDNADFIESQAPQYAEQLKLEFQLSQQAVL
NNTWVK"
misc_feature complement(348723..349556)
/locus_tag="Sbal_0309"
/note="Sulfatase; Region: Sulfatase; cl10460"
/db_xref="CDD:213119"
gene complement(350447..351661)
/locus_tag="Sbal_0310"
/db_xref="GeneID:4843779"
CDS complement(350447..351661)
/locus_tag="Sbal_0310"
/note="PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain
protein;
KEGG: shm:Shewmr7_3712 4Fe-4S ferredoxin, iron-sulfur
binding domain protein"
/codon_start=1
/transl_table=11
/product="4Fe-4S ferredoxin"
/protein_id="YP_001048712.1"
/db_xref="GI:126172563"
/db_xref="InterPro:IPR001450"
/db_xref="GeneID:4843779"
/translation="MTFIESLTLMLALMYLASLSYWSGQKWGAAATLLLSVGAVAISL
YWPLALGLIIALPLALLGHKFAPDSFKGEIKINTLRQGTQHVLALSLLLVAVQYTINT
ILLKQGITPWLMRPDVVDAFLPIAGGIELKAIVSLNLWDQTHPAAAVMLAAVLLTGLL
CKRAFCGWACPLGLAGEYLYAFRKRFIKSELTPPAWLDWPMRMLKYLLLLGLCYIVIG
MPAQSIPNYLEGNYHKIADLKMALFFLTPSLITLLVFALILALAAWRRQGFCRYLCPY
GAILGILSFASPLKIRRDSQHCLIEAKGMKCDKCSRACPANIIVHTKTTVRSDECQAC
MRCVAACPKSAALGLGLKSGHRLGHKGLLALVLIALFILPLGAYLAGFWHSQTPDNIR
MELIQVIDRVGH"
misc_feature complement(351098..>351178)
/locus_tag="Sbal_0310"
/note="4Fe-4S binding domain; Region: Fer4_5; pfam12801"
/db_xref="CDD:205081"
misc_feature complement(350633..350749)
/locus_tag="Sbal_0310"
/note="4Fe-4S dicluster domain; Region: Fer4_7; pfam12838"
/db_xref="CDD:205099"
gene 352029..353033
/locus_tag="Sbal_0311"
/db_xref="GeneID:4843780"
CDS 352029..353033
/locus_tag="Sbal_0311"
/note="PFAM: 2OG-Fe(II) oxygenase;
KEGG: aha:AHA_1948 2OG-Fe(II) oxygenase superfamily
protein"
/codon_start=1
/transl_table=11
/product="2OG-Fe(II) oxygenase"
/protein_id="YP_001048713.1"
/db_xref="GI:126172564"
/db_xref="InterPro:IPR002283"
/db_xref="InterPro:IPR005123"
/db_xref="GeneID:4843780"
/translation="MEQLPILNLSDWHAGGQSRHAFITKLADAARRIGFFYLTGHGIE
LARQQQVLLLARDFFALPLADKLAVKMTNTPHFRGYTRLQGELTLGKPDLREQFDIMQ
EETANPPRSDVPKWSQLQGPNQWPSQLPQMKTILLEWQQDLADTSVALLKALAVALEQ
SETAFDATIDAGPYQHMKLIRYPNANGETSGQGVGAHKDPGYLTLVLQDKQSGLEVQT
DEGWLSIPPLEGAFVVNIGELLELASNGYLKATYHRVTSPPAGVERYSCAFFMAAQLN
ATVPLLPLPEYLARQALGPASDPLNPLFHQVGQNVLKGRLRSHPDVAKAHYASFANAI
"
misc_feature 352029..352994
/locus_tag="Sbal_0311"
/note="Isopenicillin N synthase and related dioxygenases
[General function prediction only]; Region: PcbC; COG3491"
/db_xref="CDD:33294"
misc_feature 352038..352409
/locus_tag="Sbal_0311"
/note="non-haem dioxygenase in morphine synthesis
N-terminal; Region: DIOX_N; pfam14226"
/db_xref="CDD:206394"
misc_feature 352545..352838
/locus_tag="Sbal_0311"
/note="2OG-Fe(II) oxygenase superfamily; Region:
2OG-FeII_Oxy; pfam03171"
/db_xref="CDD:190552"
gene 353052..354212
/locus_tag="Sbal_0312"
/db_xref="GeneID:4845601"
CDS 353052..354212
/locus_tag="Sbal_0312"
/EC_number="4.4.1.11"
/note="PFAM: Cys/Met metabolism
pyridoxal-phosphate-dependent enzymes;
KEGG: aha:AHA_1947 methionine gamma-lyase"
/codon_start=1
/transl_table=11
/product="methionine gamma-lyase"
/protein_id="YP_001048714.1"
/db_xref="GI:126172565"
/db_xref="InterPro:IPR000277"
/db_xref="GeneID:4845601"
/translation="MQFKTKLLHTHHTAENSTGALTTPIYQSSTFAYGSAEDGRARFA
GEQPGFIYSRMANPTVQALEHQLSLLEGADEALVVASGMAAISSIFYALASQGDEIAF
IDPVYGGTAAFLIQTLTRAGITVRRYQDDDHLLSEISPETKIILFEPITNPTLKVSDY
RKVKLAAERVGAITICDNTFLTPYLFKPLEHGIDIVMHSATKYLSGHGDLIAGVVAGR
KALMQPIRTIALKHIGAAIGPQEAYLLQRGLRTLALRMDAHLAGAAKVADFLASHPSV
AKVYYPGLSQDPGHQVLSETINAFGGMVSIELEGGFSRAAQFLDNLNLFTQAVSLGDL
ESLACHPASTTHAAMDVASRLASGVNDNLIRLSIGVEDPQDLIADLEQALAI"
misc_feature 353064..354206
/locus_tag="Sbal_0312"
/note="Cys/Met metabolism PLP-dependent enzyme; Region:
Cys_Met_Meta_PP; pfam01053"
/db_xref="CDD:201574"
misc_feature 353106..354206
/locus_tag="Sbal_0312"
/note="CGS_like: Cystathionine gamma-synthase is a PLP
dependent enzyme and catalyzes the committed step of
methionine biosynthesis. This pathway is unique to
microorganisms and plants, rendering the enzyme an
attractive target for the development of...; Region:
CGS_like; cd00614"
/db_xref="CDD:99738"
misc_feature order(353130..353141,353145..353150,353205..353207,
353211..353213,353289..353294,353298..353303,
353370..353372,353385..353387,353394..353396,
353652..353654,353676..353678,353682..353684,
353730..353732,353763..353765,353769..353774,
354009..354011)
/locus_tag="Sbal_0312"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99738"
misc_feature order(353292..353300,353370..353372,353493..353495,
353580..353582,353646..353648,353652..353657,
353682..353684)
/locus_tag="Sbal_0312"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:99738"
misc_feature order(353292..353300,353370..353372,353580..353582,
353589..353591,353646..353648,353652..353657)
/locus_tag="Sbal_0312"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99738"
misc_feature 353655..353657
/locus_tag="Sbal_0312"
/note="catalytic residue [active]"
/db_xref="CDD:99738"
gene complement(354475..355128)
/locus_tag="Sbal_0313"
/db_xref="GeneID:4843992"
CDS complement(354475..355128)
/locus_tag="Sbal_0313"
/note="KEGG: shn:Shewana3_0309 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048715.1"
/db_xref="GI:126172566"
/db_xref="InterPro:IPR000437"
/db_xref="GeneID:4843992"
/translation="MKRLITSGLIAASLLLSGCQSAYYGAMEKVGYHKRDIMVDRVKD
AKESQEDAQKEFSSALEEMQALLNHDGGNLEKAYNKAKDEYESAQSAADNVSNRIKKV
EDVAEALFDEWQDEIGEISKASLRRNSEAKLKETRRAYEQLIKSMHRAESKMPPILTA
MKDNMLYLKHNLNAQAIGAIKGEFASLQTDISGLIKEMNKSINESNKFIESLEKSKS"
misc_feature complement(354490..355074)
/locus_tag="Sbal_0313"
/note="Protein of unknown function (DUF2959); Region:
DUF2959; pfam11172"
/db_xref="CDD:151614"
gene complement(355158..355379)
/locus_tag="Sbal_0314"
/db_xref="GeneID:4841458"
CDS complement(355158..355379)
/locus_tag="Sbal_0314"
/note="KEGG: she:Shewmr4_0315 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048716.1"
/db_xref="GI:126172567"
/db_xref="GeneID:4841458"
/translation="MSQQGSAGNVISAIASLFFPGLGQLLQGRIMAALLFFIITVVGY
ALWWLIVPAVIGAIFHLWSIIDAARFKAD"
gene 355461..356432
/gene="rbn"
/locus_tag="Sbal_0315"
/db_xref="GeneID:4845594"
CDS 355461..356432
/gene="rbn"
/locus_tag="Sbal_0315"
/note="RNase BN; required for 3' maturation of certain
phage T4-encoded tRNAs; forms a dimer; specific for
immature tRNA substrates containing incorrect residues
within the universal CCA sequence; 3' to 5'
exoribonuclease"
/codon_start=1
/transl_table=11
/product="ribonuclease BN"
/protein_id="YP_001048717.1"
/db_xref="GI:126172568"
/db_xref="InterPro:IPR004664"
/db_xref="GeneID:4845594"
/translation="MTKKIELAQIRVLFLGIWHFLLHLRRRLVEDQINIRAGHLAYVT
LLSLVPMVAVTMSMLSAFPVFKGIRGQIEGFVYENFLPAAGDTVQVYINEFVGNASKG
TAVGIAALVVVAIMLISAIDKSLNNIWRTKEKRSVVVAFSMYWMVLTLGPVLVGASLV
ASSYVISLKVFEAEALSGMLPIFIARLPMLFSVAAFLLLYMVVPNQKVKFLHALLGAI
VAALLFELGKKGFALYVTQFPSYEAIYGALATIPIVFVWVYLSWMIVLLGAEITAAMP
EYLDYESSSDDETALNAKPLADASQGDSSSVLTSAEVTALKAVAKSE"
misc_feature 355488..356342
/gene="rbn"
/locus_tag="Sbal_0315"
/note="hypothetical protein; Reviewed; Region: PRK01637"
/db_xref="CDD:179313"
gene 356469..357422
/locus_tag="Sbal_0316"
/db_xref="GeneID:4845267"
CDS 356469..357422
/locus_tag="Sbal_0316"
/note="PFAM: alpha/beta hydrolase fold;
KEGG: son:SO4400 proline iminopeptidase, putative"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold domain-containing
protein"
/protein_id="YP_001048718.1"
/db_xref="GI:126172569"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR002410"
/db_xref="GeneID:4845267"
/translation="MSESFPPFIRRDWFSVGNGQQLHLAQYGNPQGIPLLYLHGGPGA
GCDIGDLALFNGEQYWILLLDQRGSGQSLPFGDLAHNHLNGLICDMEAIRLALGIERW
CLAGGSFGATLGLIYSGLFPERVIAQVLWALFIPSKEGIDWLYGADGAAKLQPAAYRL
FSGNAPVAPSLAELLDSYHQGLASADENLRHHFARRWVQWELKLAGARLVLPRQLPDP
VLALADIELHFARHDYFNAMTVLQRVTPRVKARSVLLQGMQDAICPAALLRDFLAGLE
HAITIQSVADGGHMLNSESLFLAVTAEIHAMWSWIHQREIQ"
misc_feature 356508..357350
/locus_tag="Sbal_0316"
/note="Predicted hydrolases or acyltransferases
(alpha/beta hydrolase superfamily) [General function
prediction only]; Region: MhpC; COG0596"
/db_xref="CDD:30941"
misc_feature 356541..>356855
/locus_tag="Sbal_0316"
/note="Serine carboxypeptidase S28; Region: Peptidase_S28;
cl15279"
/db_xref="CDD:199137"
gene 357419..358024
/locus_tag="Sbal_0317"
/db_xref="GeneID:4844187"
CDS 357419..358024
/locus_tag="Sbal_0317"
/note="KEGG: son:SO4399 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048719.1"
/db_xref="GI:126172570"
/db_xref="InterPro:IPR000437"
/db_xref="GeneID:4844187"
/translation="MKTLLISACLLGLTACAATAPSQTSAIDPVVAQEVVSAPVAPKV
VQLGGLTNDAAAERLYQALINANYLATKVAPTKVAVQFGDNQFLLEPSINSAGIDRIL
MNRFYAVHPQLQASQELPVVIGTLNQKLNFAKFVLLDQGAVIQIQGTVTFADRVEIEE
LRRFMLWTNGGLAQVAQSLPDGIDQYIRPIPLMQQMVPVKP"
gene 358042..358479
/locus_tag="Sbal_0318"
/db_xref="GeneID:4843033"
CDS 358042..358479
/locus_tag="Sbal_0318"
/note="hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and
free tRNA(Tyr); possible defense mechanism against a
harmful effect of D-tyrosine"
/codon_start=1
/transl_table=11
/product="D-tyrosyl-tRNA(Tyr) deacylase"
/protein_id="YP_001048720.1"
/db_xref="GI:126172571"
/db_xref="InterPro:IPR003732"
/db_xref="GeneID:4843033"
/translation="MIALIQRVSRASVVVDNQTIGAIDKGLLVLLGVEQEDTREKMEK
LATKVMSYRMFSDENGKMNLNLEQVGGSLLVVSQFTLAADTGRGLRPSFSGAGTPDQA
LALYEEFVAFCRAKGVTTETGQFGADMQVSLVNDGPVTFNLQV"
misc_feature 358042..358476
/locus_tag="Sbal_0318"
/note="D-Tyrosyl-tRNAtyr deacylases; a class of
tRNA-dependent hydrolases which are capable of hydrolyzing
the ester bond of D-Tyrosyl-tRNA reducing the level of
cellular D-Tyrosine while recycling the peptidyl-tRNA;
found in bacteria and in eukaryotes but not...; Region:
Dtyr_deacylase; cd00563"
/db_xref="CDD:29648"
misc_feature order(358060..358062,358270..358284,358318..358320,
358462..358464)
/locus_tag="Sbal_0318"
/note="putative active site [active]"
/db_xref="CDD:29648"
misc_feature order(358171..358173,358180..358188,358192..358203,
358270..358275,358279..358284,358288..358296,
358300..358314,358318..358320,358420..358473)
/locus_tag="Sbal_0318"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29648"
misc_feature order(358183..358185,358198..358200,358300..358302,
358309..358311)
/locus_tag="Sbal_0318"
/note="putative tRNAtyr binding site [nucleotide binding];
other site"
/db_xref="CDD:29648"
gene 358639..359091
/locus_tag="Sbal_0319"
/db_xref="GeneID:4843034"
CDS 358639..359091
/locus_tag="Sbal_0319"
/note="TIGRFAM: thioesterase domain, putative;
KEGG: she:Shewmr4_0320 thioesterase domain, putative"
/codon_start=1
/transl_table=11
/product="thioesterase domain-containing protein"
/protein_id="YP_001048721.1"
/db_xref="GI:126172572"
/db_xref="InterPro:IPR012660"
/db_xref="GeneID:4843034"
/translation="MDELLTQLLIQLRQTWHSTIPVSEFMQIAPLDYSEGEFRVTAPI
APNINLHQTMFAGSIYTLMTLTGWGAVWLNQQLAGVAGDIVLADAHIRYLAPVTCDPV
VTVQWPTVDLSPLQRGRRVKVKLAVQLYCDAKLCAVFEGLYVSAPKAS"
misc_feature 358711..359070
/locus_tag="Sbal_0319"
/note="PaaI_thioesterase is a tetrameric acyl-CoA
thioesterase with a hot dog fold and one of several
proteins responsible for phenylacetic acid (PA)
degradation in bacteria. Although orthologs of PaaI exist
in archaea and eukaryotes, their function has not...;
Region: PaaI_thioesterase; cd03443"
/db_xref="CDD:48038"
misc_feature order(358798..358800,358894..358896,358915..358926)
/locus_tag="Sbal_0319"
/note="CoenzymeA binding site [chemical binding]; other
site"
/db_xref="CDD:48038"
misc_feature order(358801..358803,358807..358809,358816..358818,
358897..358911,358915..358917)
/locus_tag="Sbal_0319"
/note="subunit interaction site [polypeptide binding];
other site"
/db_xref="CDD:48038"
misc_feature order(358804..358806,358828..358833,358840..358845,
358894..358896)
/locus_tag="Sbal_0319"
/note="PHB binding site; other site"
/db_xref="CDD:48038"
gene 359251..359847
/locus_tag="Sbal_0320"
/db_xref="GeneID:4843663"
CDS 359251..359847
/locus_tag="Sbal_0320"
/EC_number="3.1.4.14"
/note="FMN-dependent; requires NADH; catalyzes the
cleavage of azo bond in aromatic azo compounds"
/codon_start=1
/transl_table=11
/product="azoreductase"
/protein_id="YP_001048722.1"
/db_xref="GI:126172573"
/db_xref="InterPro:IPR003680"
/db_xref="GeneID:4843663"
/translation="MSKVLILKSSILGGYSQSAVLIDHLASHWETQGAAITVRDLGGK
DVLPMVDGEIASGLRGGAELSARQQEMLALSDTLVAELKANDTIVIAAPMYNFTIPTQ
LKNWIDFIARAGVTFTYTETGPKGLVEGKRAVLVTTRGGAHKDGPTDHVVPYLKTVLG
FIGITNVEVVYAEALNMGPEAHDKGMSEAKHSIEQLKA"
misc_feature 359251..359844
/locus_tag="Sbal_0320"
/note="azoreductase; Reviewed; Region: PRK00170"
/db_xref="CDD:178912"
gene complement(360001..360186)
/locus_tag="Sbal_0321"
/db_xref="GeneID:4845196"
CDS complement(360001..360186)
/locus_tag="Sbal_0321"
/note="KEGG: son:SO4395 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048723.1"
/db_xref="GI:126172574"
/db_xref="GeneID:4845196"
/translation="MHKTNHAKALQFEATQVNPAEKPHETERPARFSISRNRDQASTK
VRYVETSTLTKGCSLCE"
gene complement(360262..360585)
/locus_tag="Sbal_0322"
/db_xref="GeneID:4843587"
CDS complement(360262..360585)
/locus_tag="Sbal_0322"
/note="PFAM: Rhodanese domain protein;
KEGG: shn:Shewana3_0318 rhodanese domain protein"
/codon_start=1
/transl_table=11
/product="rhodanese domain-containing protein"
/protein_id="YP_001048724.1"
/db_xref="GI:126172575"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:4843587"
/translation="MFQSLLAKLSGSQSGEKCWQLIEQGARVIDVRSPEEFASGHLPQ
AINVPLPTLDQWLHQVDNKQHPFVLYCGAGIRAQKGCDILKANGFGCVVNGGSLKDLV
CCQPS"
misc_feature complement(360298..360525)
/locus_tag="Sbal_0322"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cd00158"
/db_xref="CDD:29073"
misc_feature complement(360373..360375)
/locus_tag="Sbal_0322"
/note="active site residue [active]"
/db_xref="CDD:29073"
gene complement(360731..361306)
/locus_tag="Sbal_0323"
/db_xref="GeneID:4844614"
CDS complement(360731..361306)
/locus_tag="Sbal_0323"
/note="PFAM: helix-turn-helix domain protein; Cupin 2,
conserved barrel domain protein;
KEGG: she:Shewmr4_0324 transcriptional regulator, XRE
family with cupin sensor"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_001048725.1"
/db_xref="GI:126172576"
/db_xref="InterPro:IPR001387"
/db_xref="InterPro:IPR013096"
/db_xref="GeneID:4844614"
/translation="MQTINSYLATTLKALRNQKGWSLDKAAQETGVSKAMIGQIERGE
SSPTIATLWKIASGFNFSLSTFLEPTPQSQGAVFRKPDELRQQPATDGMLVASLFPFE
DRFGFEMFELTLLPNYERLSEPHEAGVTEHVIVLSGTMEVLVDGQWQTLKQGEAVRFA
ADKPHGYRNLNDQAVVFHDIIHYQRGSESSL"
misc_feature complement(360935..361285)
/locus_tag="Sbal_0323"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:31586"
misc_feature complement(361109..361273)
/locus_tag="Sbal_0323"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature complement(order(361181..361183,361256..361258,
361268..361270))
/locus_tag="Sbal_0323"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature complement(order(361184..361186,361259..361261))
/locus_tag="Sbal_0323"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature complement(order(361178..361183,361193..361195,
361202..361204,361235..361240))
/locus_tag="Sbal_0323"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
misc_feature complement(360764..360979)
/locus_tag="Sbal_0323"
/note="Cupin domain; Region: Cupin_2; pfam07883"
/db_xref="CDD:203791"
gene 361433..362620
/locus_tag="Sbal_0324"
/db_xref="GeneID:4841359"
CDS 361433..362620
/locus_tag="Sbal_0324"
/note="TIGRFAM: benzoate transporter;
PFAM: Benzoate membrane transport protein;
Xanthine/uracil/vitamin C permease;
KEGG: shm:Shewmr7_3699 benzoate transporter"
/codon_start=1
/transl_table=11
/product="benzoate transporter"
/protein_id="YP_001048726.1"
/db_xref="GI:126172577"
/db_xref="InterPro:IPR002355"
/db_xref="InterPro:IPR004711"
/db_xref="InterPro:IPR006043"
/db_xref="GeneID:4841359"
/translation="MWREAGSLSKISAGFIAVLVGYSSSAVIIFQAAEAVGATPAQIS
SWLWALGVGMGVTSIGLSLYYKNPILTAWSTPGAALMVTSLGGLSINQAIGAFLVSSI
LITLCGVAGWMDKLIRIMPQSVASAMLAGILLQFGLGLFQAMQTQLSLILIMLLVFVV
VKPFAPRYIILLTLLVGIGMSFQLDLLKLDAVQLQLAMPVWTMPEFSLASVIGVALPL
FVVTMASQNMPGVAALHGNGYRPPISPLITSTGLIGVILAPFGGFAFNLSAITAAICM
GKEADPNPATRYWAAVWGGVFYFITGLLGATVVGLFSAFPKELVLAIAGLALLGTIAN
SLTAALAKTEDREVAVITFLVTASGFSVLGIGSAFWGLLLGFIIHWWNGHRTATVVKR
ANT"
misc_feature 361451..362569
/locus_tag="Sbal_0324"
/note="Benzoate membrane transport protein; Region: BenE;
pfam03594"
/db_xref="CDD:112412"
misc_feature 361469..362563
/locus_tag="Sbal_0324"
/note="benzoate transporter; Region: benE; TIGR00843"
/db_xref="CDD:129923"
gene complement(362673..363164)
/locus_tag="Sbal_0325"
/db_xref="GeneID:4844289"
CDS complement(362673..363164)
/locus_tag="Sbal_0325"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: shm:Shewmr7_3696 GCN5-related N-acetyltransferase"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_001048727.1"
/db_xref="GI:126172578"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:4844289"
/translation="MRLTMKATMKATMKITLDDLKGPEIAALLQEHLNDMRATSPPES
VHALDLDGLRQPNIHFWTLWDGNNLAGCGALKWLDAEHAEIKSMRTAAPYKQQGIASK
ILQHLINDAKTAGVKRLSLETGSMDFFNPARLLYSKFGFEICDPFDGYQLDPNSVFMT
KKI"
misc_feature complement(362700..363164)
/locus_tag="Sbal_0325"
/note="Acetyltransferases [General function prediction
only]; Region: RimI; COG0456"
/db_xref="CDD:30804"
misc_feature complement(362799..362987)
/locus_tag="Sbal_0325"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature complement(order(362862..362867,362895..362903))
/locus_tag="Sbal_0325"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(363680..364423)
/locus_tag="Sbal_0326"
/db_xref="GeneID:4842104"
CDS complement(363680..364423)
/locus_tag="Sbal_0326"
/note="KEGG: shn:Shewana3_0325 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048728.1"
/db_xref="GI:126172579"
/db_xref="GeneID:4842104"
/translation="MKPLFAGMLLSISLLTAPLFAKEYTVETYQEVFKGDNEFKQKQA
IESLSLAGLSDPAIYDALEAKLLASLPQATEKNAIDYSAWLVKGLAYSGNDKYSETIN
SIVNGNYHKKLKKYASQANENLAQYKKWNTILGDKSQYAADQSQQNNAFANALRSDDL
ELMRLAAKRIMDDRQYDDFILAVLSNELKTPRLMADDKLAIDTYANMAKALASSGNAD
YRDVIENIATTSSNRKLQKYAASYLKKFY"
gene complement(364452..365711)
/locus_tag="Sbal_0327"
/db_xref="GeneID:4842105"
CDS complement(364452..365711)
/locus_tag="Sbal_0327"
/EC_number="2.3.1.41"
/note="FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes
a condensation reaction in fatty acid biosynthesis:
addition of an acyl acceptor of two carbons from
malonyl-ACP; required for the elongation of short-chain
unsaturated acyl-ACP"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-(acyl carrier protein) synthase II"
/protein_id="YP_001048729.1"
/db_xref="GI:126172580"
/db_xref="InterPro:IPR000794"
/db_xref="GeneID:4842105"
/translation="MSEATNQTRLGKRVVITGVGGITALGHDWPTIAASLKAQKNCVV
TMNDWDRYDGLNTRLAAPITDFEVPSHYSRKKIRSMGKVSIMATRASELALLDAGLLD
DPIVSSGEMGIAYGSSTGSTDPITAFGDMLKTGDMSGITATSYIRMMAHTTAVNVGVF
FGLKGRIHTTSSACTSGSQGIGYAYEAIKYGQQTLMLAGGGEELCPTEAVVFDTLFAT
STKNSTPELTPRPFDADRDGLVIGEGACTLVLEELEHAKARGAKIYAELVGFGTNSDG
QHVTQPNAQTMEIAIRLALKDAQLEPSAIGYVNAHGTATDRGDIAESHATQAVFGADT
PISSLKSYTGHTLGACGALEAWVSIEMMNAGWFAPTLNLKNIDPQCADLDYIRNELRP
IDTDYVMSNNFAFGGINTSLIFKRWTR"
misc_feature complement(364467..365678)
/locus_tag="Sbal_0327"
/note="3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed; Region: PRK09116"
/db_xref="CDD:181657"
misc_feature complement(364470..365678)
/locus_tag="Sbal_0327"
/note="Beta-ketoacyl-acyl carrier protein (ACP) synthase
(KAS), type I and II. KASs are responsible for the
elongation steps in fatty acid biosynthesis. KASIII
catalyses the initial condensation and KAS I and II
catalyze further elongation steps by Claisen...; Region:
KAS_I_II; cd00834"
/db_xref="CDD:29421"
misc_feature complement(order(364488..364490,364494..364496,
364845..364847,364881..364895,365067..365072,
365079..365084,365142..365144,365151..365156,
365163..365165,365199..365207,365211..365213,
365217..365219,365235..365237,365247..365249,
365259..365261,365277..365279,365313..365318,
365322..365324,365334..365339,365358..365360))
/locus_tag="Sbal_0327"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29421"
misc_feature complement(order(364677..364679,364779..364781,
365190..365192))
/locus_tag="Sbal_0327"
/note="active site"
/db_xref="CDD:29421"
gene complement(365712..366437)
/gene="fabG"
/locus_tag="Sbal_0328"
/db_xref="GeneID:4843231"
CDS complement(365712..366437)
/gene="fabG"
/locus_tag="Sbal_0328"
/EC_number="1.1.1.100"
/note="Catalyzes the first of the two reduction steps in
the elongation cycle of fatty acid synthesis"
/codon_start=1
/transl_table=11
/product="3-ketoacyl-ACP reductase"
/protein_id="YP_001048730.1"
/db_xref="GI:126172581"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR011285"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:4843231"
/translation="MNNRVLVTGSSRGIGKAIALKLAQAGFDIALHYHSNQTAADDTA
TQIRALGVNVSLLKFDVADRATVKAAIEADIEANGAYYGVILNAGINRDTAFPAMTES
EWDSVIHTNLDGFYNVIHPCVMPMVQGRKGGRIITLASVSGIAGNRGQVNYSASKAGI
IGATKALSLELAKRKITVNCIAPGLIETDMVADIPKDMVEQLVPMRRMGKPNEIAALA
AFLMSDDAAYITRQVISVNGGMI"
misc_feature complement(365715..366437)
/gene="fabG"
/locus_tag="Sbal_0328"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(365718..366425)
/gene="fabG"
/locus_tag="Sbal_0328"
/note="beta-Keto acyl carrier protein reductase (BKR),
involved in Type II FAS, classical (c) SDRs; Region:
BKR_SDR_c; cd05333"
/db_xref="CDD:187594"
misc_feature complement(order(365868..365876,365880..365882,
365886..365891,365967..365969,365979..365981,
366018..366026,366108..366110,366168..366179,
366255..366263,366333..366335,366339..366341,
366396..366407,366411..366413))
/gene="fabG"
/locus_tag="Sbal_0328"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187594"
misc_feature complement(order(365721..365759,365766..365768,
365778..365783,365787..365792,365799..365801,
365808..365819,365823..365831,365883..365885,
365919..365924,365928..365945,365949..365954,
365961..365966,365973..365978,365985..366008,
366057..366059,366066..366071,366078..366083,
366087..366092,366099..366104,366114..366116,
366123..366128,366135..366143,366147..366158,
366234..366236,366363..366365,366375..366377))
/gene="fabG"
/locus_tag="Sbal_0328"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:187594"
misc_feature complement(order(365928..365933,365937..365945,
365949..365954,365961..365966,365973..365978,
365985..366011,366057..366059,366066..366071,
366078..366080,366087..366092,366099..366104,
366114..366116,366123..366128,366135..366137,
366141..366143,366147..366155))
/gene="fabG"
/locus_tag="Sbal_0328"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187594"
misc_feature complement(order(365967..365969,365979..365981,
366018..366020,366105..366107))
/gene="fabG"
/locus_tag="Sbal_0328"
/note="active site"
/db_xref="CDD:187594"
gene complement(366625..367161)
/locus_tag="Sbal_0329"
/db_xref="GeneID:4844688"
CDS complement(366625..367161)
/locus_tag="Sbal_0329"
/note="KEGG: son:SO4381 thioester dehydrase family
protein"
/codon_start=1
/transl_table=11
/product="thioester dehydrase family protein"
/protein_id="YP_001048731.1"
/db_xref="GI:126172582"
/db_xref="GeneID:4844688"
/translation="MMPFIQFNLPFAEQDIADFIPHRAPMILVDKIISYQRDTLVTEV
TITTQSPYFDDKHKAVPNYVGIEYMAQSIAALAGVEAKLRNDKIRVGFLLGSRKLALH
AKQYELGRTYRTQVNRLYQEESGLAVFDCQIYLLPEAGSDQEKILVATANVNVFQPQD
TQAYLDGNQDAGNRSLGH"
misc_feature complement(366685..367122)
/locus_tag="Sbal_0329"
/note="Domain of unknown function, appears to be related
to a diverse group of beta-hydroxydecanoyl ACP
dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases
(FabZ). This group appears to lack the conserved active
site histidine of FabA and FabZ; Region: FabA_like;
cd01289"
/db_xref="CDD:48034"
misc_feature complement(order(366877..366888,366937..366942,
366949..366954,366961..366963,367102..367110))
/locus_tag="Sbal_0329"
/note="putative active site 1 [active]"
/db_xref="CDD:48034"
gene complement(367163..368383)
/locus_tag="Sbal_0330"
/db_xref="GeneID:4844149"
CDS complement(367163..368383)
/locus_tag="Sbal_0330"
/EC_number="2.3.1.41"
/note="FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes
a condensation reaction in fatty acid biosynthesis:
addition of an acyl acceptor of two carbons from
malonyl-ACP; required for the elongation of short-chain
unsaturated acyl-ACP"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP synthase"
/protein_id="YP_001048732.1"
/db_xref="GI:126172583"
/db_xref="InterPro:IPR000794"
/db_xref="GeneID:4844149"
/translation="MVKKRYAMMNRVAITQIGLCTPLGQDPQQVLDRLIAGDTSAMQR
SDTLLFEHPTLVAPVTAALPAIPAKLIQFDCRNNQLLLCAAQQITATIEQAKRDLGHA
RIGVVLGTSTSGISKGEAALSYRNQHGHFPADYHYFQQELGSTSDFLRQYFELDGPCY
TISTACSSSAKVFASAKRLLSANLCDMVIVGGVDSLCQLTVNGFNALESVSKGHCNPF
SINRDGINIGEGAALFVLTAGESDVMLAGIGESSDAHHISAPHPEGAGAITAMQAALQ
DANIAAQDIGYINLHGTATPKNDAMESRAVVEVFGANTPPCSSTKPLVGHTLGAAGAI
EAAFCYLLLSTHNHDQALPPHQWDGQIDPQDPSIALVERHQVAAKGTLNYVMSNSFAF
GGSNASLIFCRNEA"
misc_feature complement(367172..368359)
/locus_tag="Sbal_0330"
/note="3-oxoacyl-(acyl carrier protein) synthase I;
Reviewed; Region: PRK09185"
/db_xref="CDD:181683"
misc_feature complement(367181..368356)
/locus_tag="Sbal_0330"
/note="Beta-ketoacyl-acyl carrier protein (ACP) synthase
(KAS), type I and II. KASs are responsible for the
elongation steps in fatty acid biosynthesis. KASIII
catalyses the initial condensation and KAS I and II
catalyze further elongation steps by Claisen...; Region:
KAS_I_II; cd00834"
/db_xref="CDD:29421"
misc_feature complement(order(367199..367201,367205..367207,
367577..367579,367619..367633,367763..367768,
367775..367780,367838..367840,367847..367852,
367859..367861,367895..367903,367907..367909,
367913..367915,367931..367933,367943..367945,
367955..367957,367979..367981,368006..368011,
368015..368017,368027..368032,368051..368053))
/locus_tag="Sbal_0330"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29421"
misc_feature complement(order(367406..367408,367511..367513,
367886..367888))
/locus_tag="Sbal_0330"
/note="active site"
/db_xref="CDD:29421"
gene complement(368412..369200)
/locus_tag="Sbal_0331"
/db_xref="GeneID:4842059"
CDS complement(368412..369200)
/locus_tag="Sbal_0331"
/note="KEGG: shn:Shewana3_0330 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048733.1"
/db_xref="GI:126172584"
/db_xref="GeneID:4842059"
/translation="MSLNLNAKWLAITTLLLASLGLTGCSELLLRQTCVGLAKDMRYC
LAPLPHNFAPATDKPLTQPRIKPTTEPTTKPAIMASQQTDSNTGVFSPQSFSQKVSIK
VGKESHELLTQLELEGERMTLVGLAPLGQALFTLVYDGNTLSSEQSVLLGDNFKAEYL
MAMMQLIYWPEQSIRAHLEGGHLVTGLCDTVEGNQSDTLVDTRMNTIPCRQIYSQDTL
ISKSALQTHVVQIRYQQNVGDALWQAHISLTMPQAKFELEIEPI"
misc_feature complement(368496..369128)
/locus_tag="Sbal_0331"
/note="Protein of unknown function (DUF3261); Region:
DUF3261; pfam11659"
/db_xref="CDD:152095"
gene complement(369205..370494)
/locus_tag="Sbal_0332"
/db_xref="GeneID:4843252"
CDS complement(369205..370494)
/locus_tag="Sbal_0332"
/note="PFAM: monooxygenase, FAD-binding; FAD dependent
oxidoreductase; tryptophan halogenase;
KEGG: shm:Shewmr7_3686 monooxygenase, FAD-binding protein"
/codon_start=1
/transl_table=11
/product="monooxygenase FAD-binding"
/protein_id="YP_001048734.1"
/db_xref="GI:126172585"
/db_xref="InterPro:IPR002938"
/db_xref="InterPro:IPR003042"
/db_xref="InterPro:IPR006076"
/db_xref="InterPro:IPR006905"
/db_xref="GeneID:4843252"
/translation="MSTQVHDLSAIPNSLDVDVAIIGAGPSGAIAASLLHQQGKRVLV
LEKQHFPRFSIGESLLPCCMQFIEEAGMLDALNAAGFQHKNGAAFRRNGTYTTFDFTD
KFTPGPGTTFQVQRASFDKLLADTAQSQGVDIRYGETVEAIDLTENPRLTVRNEQGEL
YQINAQYVLDASGFGRVLPRLLNLESPSCLPPRSAIFTHVEDNISDASFDRNKILISV
HPEHKDIWYWLIPFSNGRCSLGVVAEPQLLERLPGSLEQQLMSIVNEEPGLKALLANA
KVVQECATLKGYSANVSRLATDKFALLGNAGEFLDPVFSSGVTIAMQSASMAAKCLTK
QLNGETVDWQADYSTPLMQGVNAFRTYVQAWYDGRFQDVIFYEEPNERIKQMICSILA
GYAWDTNNPFVKDSERRLNMIVELCRNPAATPAFAEV"
misc_feature complement(369241..370455)
/locus_tag="Sbal_0332"
/note="Dehydrogenases (flavoproteins) [Energy production
and conversion]; Region: FixC; COG0644"
/db_xref="CDD:30989"
misc_feature complement(<369517..>370161)
/locus_tag="Sbal_0332"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene complement(370518..373040)
/locus_tag="Sbal_0333"
/db_xref="GeneID:4842221"
CDS complement(370518..373040)
/locus_tag="Sbal_0333"
/note="KEGG: son:SO4377 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048735.1"
/db_xref="GI:126172586"
/db_xref="GeneID:4842221"
/translation="MASNFAARANQALMQSSPKWRLAIWLLLMLSASLWTLQLWQNGA
RVQSDILAMLPHLQQDKLTERALNQVEATLADQVYIALVAKDETTAIAAAKLLMQKLE
ADLVARGKQGALTDIRSADMQLGEALGQFYFPHRFKLLTEPQAKALANQDIGSLIEAA
TAQLYNAFSYANSNLLAQDPLLLFPANLLTLAPSSKVRASQGILLANQGDNVAAVVMA
KGRESAFNPNAQLAQMTALTQGLDAVKQSYPDITVLKAGALFHALAATQTAKSEISIL
GLASLLGVIALVWLAFRSVMPLLLAIVTISSGLLLAVTFTLSVFGELHLLTLVFGTSL
IGIAIDYSFHFYCERLSDSERSAKATVAYIFPTVTLAFITSALAYVGIGLAPFPGMQQ
VAIFCAAGLLGAYLTLILAYPLLASSRLPEGSRPLALAGTYLASLTQLSKRFTTPLGM
GMFALVILVWCLVGVTKLTVDDDIRHLQQSPASVTEPENQLRQLLSGGTDNQFLLVRA
PNEEALLQQLERVSPMLDTAITNQELGNYVSLSRYLPSHQKQDTAYHLQGKIYQTQID
TVLTSLGLDENLKPELQAAYLAAKTDYITPAAFFTLGAGKQLAPLWLAPLWLAPNGKA
TDYGAINDGDTLNDDGASADQGADYGAIVLLGGIQQIDALKARFAHDGSVQLIDKVAD
ISAVMGHYRLLTLKLLALALGIALLLFSLNFGFKKAAVVVAVPALAALLTLATLGLTG
SPLSLFHALALILVFGIGIDYSLFFASAQNHGKAVMMAVFMSACSTLLAFGLLAFSQT
QAIHYFGLTLSLGIGFTFLLSPLILTTTLALTTNQLLTTKKS"
misc_feature complement(<371277..372920)
/locus_tag="Sbal_0333"
/note="Predicted exporter [General function prediction
only]; Region: COG4258"
/db_xref="CDD:33981"
gene complement(373043..373813)
/locus_tag="Sbal_0334"
/db_xref="GeneID:4845051"
CDS complement(373043..373813)
/locus_tag="Sbal_0334"
/note="KEGG: shm:Shewmr7_3684 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048736.1"
/db_xref="GI:126172587"
/db_xref="GeneID:4845051"
/translation="MNSVLAKSSALTKCALFLCLAFALISLPLKAETLAAPGAYQTLF
SQSADTAQLVALSQKLNLGETVRGHFVQSRQLKVLKKPLISQGQFIFDKEQGLIWQQI
KPFESLLILKDKQLIQRDSQGRVQISKADASASAAVMGDLLPSLVRAMLGGNISGLSE
NFELHFLITDKLNTEKLSPDGQWQLGLTPKDPLMKKAIANMVLEGSDVLQSLVLLSAA
PNVTPQDMTRIDFSALSQGTLSEAELAQYALALEASKP"
gene complement(373813..374244)
/locus_tag="Sbal_0335"
/db_xref="GeneID:4845052"
CDS complement(373813..374244)
/locus_tag="Sbal_0335"
/note="PFAM: thioesterase superfamily protein;
KEGG: shm:Shewmr7_3683 thioesterase superfamily protein"
/codon_start=1
/transl_table=11
/product="thioesterase superfamily protein"
/protein_id="YP_001048737.1"
/db_xref="GI:126172588"
/db_xref="InterPro:IPR006683"
/db_xref="GeneID:4845052"
/translation="MKSLLTIDMEMQIPFHDVDSMGITWHGNYLRYFEIARCKLLDEL
GYNYRQMQASNYAWPIIDLQIKYVKASTFEQKITVRAELVEWENRLKINYQIRDVETG
ARITKGYTIQAAVDMSTQELCFVTPEVFRDKIATLLAKVED"
misc_feature complement(373897..374220)
/locus_tag="Sbal_0335"
/note="4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes
the final step in the 4-chlorobenzoate degradation pathway
in which 4-chlorobenzoate is converted to
4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT
forms a homotetramer with four active sites; Region: 4HBT;
cd00586"
/db_xref="CDD:48031"
misc_feature complement(order(373978..373980,373981..373986,
374065..374067,374071..374073,374143..374145))
/locus_tag="Sbal_0335"
/note="active site"
/db_xref="CDD:48031"
gene complement(374241..375815)
/locus_tag="Sbal_0336"
/db_xref="GeneID:4841419"
CDS complement(374241..375815)
/locus_tag="Sbal_0336"
/EC_number="4.3.1.3"
/note="PFAM: phenylalanine/histidine ammonia-lyase;
KEGG: she:Shewmr4_0344 histidine ammonia-lyase"
/codon_start=1
/transl_table=11
/product="histidine ammonia-lyase"
/protein_id="YP_001048738.1"
/db_xref="GI:126172589"
/db_xref="InterPro:IPR001106"
/db_xref="GeneID:4841419"
/translation="MSHTKAADSESQSDLQTVEFGRQFLTLEQVVAVAKGAPVKLCDD
ADYQEYIQKGARFIDSLLHEEGVVYGVTTGYGDSCTVNVSLDLVHELPLHLTRFHGCG
LGETLSIMQARAVMACRLNSLAIGKSGVTYELLKRIETLLNLNIVPVIPEEGSVGASG
DLTPLSYLAAVLVGEREVIYQGERQATQDVYAKLNITPHVLRPKEGLALMNGTAVMTA
LACLAFDRAQYLARLSSRITAMASLTLKGNSNHFDEILFAAKPHPGQNQIATWIREDL
NHHEHPRNSDRLQDRYSIRCAPHIIGVLQDALPFMRQFIETEVNSANDNPIVDGEGEH
ILHGGHFYGGHIAFAMDSLKNTVANLADLIDRQMALVMDPKFNNGLPANLSGSTGPRR
AINHGFKAVQIGVSAWTAEALKHTMPASVFSRSTECHNQDKVSMGTIAARDCMRVLQL
TEQVAAAALLAMTQGIGLRIAQNELSEASLTPSLAKTLAQVRADFETLIEDRPLETVL
RQTIAKIQAGEWEVCR"
misc_feature complement(374409..375743)
/locus_tag="Sbal_0336"
/note="Phenylalanine ammonia-lyase (PAL) and histidine
ammonia-lyase (HAL); Region: PAL-HAL; cd00332"
/db_xref="CDD:176460"
misc_feature complement(order(374805..374807,374841..374843,
374931..374933,374940..374942,375183..375185,
375195..375209,375531..375533,375540..375542,
375591..375593,375597..375599,375603..375611))
/locus_tag="Sbal_0336"
/note="active sites [active]"
/db_xref="CDD:176460"
misc_feature complement(order(374466..374471,374478..374480,
374487..374492,374508..374510,374517..374537,
374568..374579,374583..374600,374604..374606,
374610..374621,374625..374630,374634..374636,
374649..374651,374688..374690,374697..374699,
374706..374708,374718..374720,374730..374732,
374739..374741,374760..374762,374772..374774,
374781..374786,374790..374810,374814..374816,
374829..374837,374850..374855,374862..374867,
374874..374879,374886..374888,374895..374900,
374916..374921,374928..374933,374937..374945,
374949..374951,375021..375023,375030..375032,
375036..375041,375048..375053,375306..375308,
375315..375317,375354..375359,375441..375443,
375504..375527,375534..375536,375591..375596))
/locus_tag="Sbal_0336"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176460"
gene complement(375812..377671)
/locus_tag="Sbal_0337"
/db_xref="GeneID:4844841"
CDS complement(375812..377671)
/locus_tag="Sbal_0337"
/note="PFAM: glycosyl transferase, family 2; lipid A
biosynthesis acyltransferase;
KEGG: she:Shewmr4_0345 glycosyl transferase, family 2"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_001048739.1"
/db_xref="GI:126172590"
/db_xref="InterPro:IPR001173"
/db_xref="InterPro:IPR004960"
/db_xref="GeneID:4844841"
/translation="MLTPPSDLVESAHIKLALVIPNYNHSAAIAQTLAELAQFNLPCY
LIDDGSNDETRYLLQSLAQTYPWVTLLLHPYNRGKGAAVMTGLRRAYRDGFSHALQVD
ADGQHNLADIPAMLARAQAKPDALISGKPEYDESVPKGRLYGRYLTHFWVWVETLSFN
IQDSMCGFRVYPLAATERLLCQQALTERMDFDIEILVKLYWQGVEILFQPTKVIYPEG
GVSHFQGVADNVRITKLHTKLFFGMLKRLPWLLKRKSQQQTVQNSHCSSATSSTSATH
WSGMKERGSYWGIKLLAESYRFGGHWLCRAIMYPVICYFFLTGKVTREASLDFLRRVQ
KLEPQHPKLNQPVGWRDSLNHFLAFGNAALDRIDAWCDRIELSQVDFPDRQVLADQLE
SGKGAVLLVSHLGNLELCRAISIHQRKVKVNVMVLTNHAENFNKVVKQLNPDSTLNLI
QVTELNPATSMLLQQKIEDGELVVIAGDRTSSNTQGRVMYAPFMGQDAAFPQGPFILA
GLLDCPVFLMFCLREQGRYRVHLERFAETLKGPRAGRMDRLQQAVNRYSERLEYFARR
EPLQWFNFFDFWRKDNELQRTPSHLVQPNPLPTTSASSPIPDQDHKTDRTQHS"
misc_feature complement(377075..377620)
/locus_tag="Sbal_0337"
/note="DPM_DPG-synthase_like is a member of the
Glycosyltransferase 2 superfamily; Region:
DPM_DPG-synthase_like; cd04179"
/db_xref="CDD:133022"
misc_feature complement(order(377360..377362,377603..377605,
377609..377611))
/locus_tag="Sbal_0337"
/note="Ligand binding site; other site"
/db_xref="CDD:133022"
misc_feature complement(order(377360..377365,377528..377530))
/locus_tag="Sbal_0337"
/note="Putative Catalytic site; other site"
/db_xref="CDD:133022"
misc_feature complement(377360..377368)
/locus_tag="Sbal_0337"
/note="DXD motif; other site"
/db_xref="CDD:133022"
misc_feature complement(375932..376819)
/locus_tag="Sbal_0337"
/note="Bacterial lipid A biosynthesis acyltransferase;
Region: Lip_A_acyltrans; pfam03279"
/db_xref="CDD:112109"
misc_feature complement(375935..376540)
/locus_tag="Sbal_0337"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: LABLAT-like; Region:
LPLAT_LABLAT-like; cd07984"
/db_xref="CDD:153246"
misc_feature complement(order(376229..376237,376385..376396,
376448..376450,376454..376456,376463..376465))
/locus_tag="Sbal_0337"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153246"
gene complement(377665..378069)
/locus_tag="Sbal_0338"
/db_xref="GeneID:4842448"
CDS complement(377665..378069)
/locus_tag="Sbal_0338"
/note="KEGG: son:SO4372 thioester dehydrase family
protein"
/codon_start=1
/transl_table=11
/product="thioester dehydrase family protein"
/protein_id="YP_001048740.1"
/db_xref="GI:126172591"
/db_xref="GeneID:4842448"
/translation="MIKSSLPPILHSDIGIDNIELRLLVAADLEYFNGHFPEQAVLPG
VTQLDWAVRLGCQHFGYSEAVANLEVLKFQQLILPGQEVTLSISNNAAKAKLTFAYID
GENRYASGRIAFDSTPVNSKSATNNGDEASPC"
misc_feature complement(377758..378015)
/locus_tag="Sbal_0338"
/note="FabA/Z, beta-hydroxyacyl-acyl carrier protein
(ACP)-dehydratases: One of several distinct enzyme types
of the dissociative, type II, fatty acid synthase system
(found in bacteria and plants) required to complete
successive cycles of fatty acid elongation; Region:
FabA_FabZ; cd00493"
/db_xref="CDD:48029"
misc_feature complement(order(377842..377853,377938..377946))
/locus_tag="Sbal_0338"
/note="active site 2 [active]"
/db_xref="CDD:48029"
misc_feature complement(order(377842..377847,377851..377853,
377857..377859,377866..377880,377923..377925,
377935..377937))
/locus_tag="Sbal_0338"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48029"
misc_feature complement(order(377872..377880,377902..377904,
377911..377916,377923..377925))
/locus_tag="Sbal_0338"
/note="active site 1 [active]"
/db_xref="CDD:48029"
gene complement(378062..379426)
/locus_tag="Sbal_0339"
/db_xref="GeneID:4845598"
CDS complement(378062..379426)
/locus_tag="Sbal_0339"
/note="KEGG: shn:Shewana3_0338 aconitate hydratase"
/codon_start=1
/transl_table=11
/product="aconitate hydratase"
/protein_id="YP_001048741.1"
/db_xref="GI:126172592"
/db_xref="InterPro:IPR000873"
/db_xref="GeneID:4845598"
/translation="MTQLLKNWLTQGPFAQQLISFNHHDIVTGALFTNQVAYFYEQLL
AAPEKKWLLASDTSDLFAVGLCAALLAGKEIILPPNTQTGTLSELTHQFDGILSDKPL
CECQAFVLLKKELSLPNKPWPASEAIGELVLFTSGSSGEPKAIRKTLEQLDVEVSVLE
HTFAEHLPHCSVVSTVSHQHIYGLLFKILWPLAASRPFLSEQIEYPETLSYYTALLPN
LCLISSPAQLSRLPKALEHERQLRSPSLVFSSGGPLSFAAAKGVNQCYGHLPIEIFGS
TETGGIAYRRQHEADEPWQVFDRISIDQDPTDGALLLKSPYLADDEWLRCEDKIEPTE
NGQFRLKGRLDRIVKIEEKRLSLAQMETLMSSHAYVEQAALVVLPQFKSQLGAVVTLS
ELGKNVLQEQGKLSINNALKAHLLTQFERVTLPRRWRYPDILPLNTQGKRVTAQLVEL
FDHD"
misc_feature complement(378068..379426)
/locus_tag="Sbal_0339"
/note="Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases
II [Lipid metabolism / Secondary metabolites biosynthesis,
transport, and catabolism]; Region: CaiC; COG0318"
/db_xref="CDD:30666"
misc_feature complement(378305..>379036)
/locus_tag="Sbal_0339"
/note="AMP-binding enzyme; Region: AMP-binding; cl15778"
/db_xref="CDD:212383"
gene complement(379423..379971)
/locus_tag="Sbal_0340"
/db_xref="GeneID:4841691"
CDS complement(379423..379971)
/locus_tag="Sbal_0340"
/note="KEGG: shm:Shewmr7_3678 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048742.1"
/db_xref="GI:126172593"
/db_xref="GeneID:4841691"
/translation="MRALLQVLTALTLLAYPVAVYFGLNYLPAGTIALVLCVLLIVRL
MLQKQKVKTLVLPLLVGIALTAGSYLAKRSDWLLYYPVVINLTMLALFSYSLHTGPCM
IESLARLKEPDLPDEAIPYLKKVTLLWCGLFILNGSMAAYTAGFTSLATWTLYNGLIA
YVLMGLLLGGEWLYRSFWLKKT"
misc_feature complement(379432..379926)
/locus_tag="Sbal_0340"
/note="Predicted membrane protein [Function unknown];
Region: COG4648"
/db_xref="CDD:34267"
gene complement(379971..380219)
/locus_tag="Sbal_0341"
/db_xref="GeneID:4844575"
CDS complement(379971..380219)
/locus_tag="Sbal_0341"
/note="carries the fatty acid chain in fatty acid
biosynthesis"
/codon_start=1
/transl_table=11
/product="acyl carrier protein"
/protein_id="YP_001048743.1"
/db_xref="GI:126172594"
/db_xref="InterPro:IPR003231"
/db_xref="InterPro:IPR006163"
/db_xref="GeneID:4844575"
/translation="MQNREQILAMLTTILVDEFEIEAEAITPEANLYEELDLDSIDAV
DLVIKLQQLTGKKIQPDEFKSVRTVNDVVNAIEGLVKD"
misc_feature complement(379974..380219)
/locus_tag="Sbal_0341"
/note="acyl carrier protein; Provisional; Region:
PRK05350"
/db_xref="CDD:180033"
gene complement(380229..380483)
/locus_tag="Sbal_0342"
/db_xref="GeneID:4843222"
CDS complement(380229..380483)
/locus_tag="Sbal_0342"
/note="KEGG: shn:Shewana3_0344 acyl carrier protein,
putative"
/codon_start=1
/transl_table=11
/product="acyl carrier protein"
/protein_id="YP_001048744.1"
/db_xref="GI:126172595"
/db_xref="InterPro:IPR003231"
/db_xref="InterPro:IPR006163"
/db_xref="GeneID:4843222"
/translation="MNLNNEIKQLIIDCLDLEDVSIDDIETDAPLFGEGLGLDSIDAL
ELGLAIKKKFDVKIEANSDATKAHFHSVASLASFIESQRP"
misc_feature complement(380235..380477)
/locus_tag="Sbal_0342"
/note="Phosphopantetheine attachment site; Region:
PP-binding; cl09936"
/db_xref="CDD:214165"
gene complement(380467..381291)
/locus_tag="Sbal_0343"
/db_xref="GeneID:4843223"
CDS complement(380467..381291)
/locus_tag="Sbal_0343"
/note="PFAM: phospholipid/glycerol acyltransferase;
KEGG: she:Shewmr4_0351 phospholipid/glycerol
acyltransferase"
/codon_start=1
/transl_table=11
/product="phospholipid/glycerol acyltransferase"
/protein_id="YP_001048745.1"
/db_xref="GI:126172596"
/db_xref="InterPro:IPR002123"
/db_xref="GeneID:4843223"
/translation="MHNAAYTLPETRRAGLNYVPRWLGGVSCYIAFGLGGLLSSLTIL
PLLRFWPGTPEARIIRVQKAVHLMFKGFVAMLTWAGVIHVSTHRAQQLHDARGVIVIA
NHPSLVDVVVLISLMPNAGCIVKQGLWRNPFLRGVVSCAGYIPNRGAELMLEDCREVL
ARGTNLIIFPEGTRTVVGATINDFARGAANIALRAEADILPVVLRTNVRGLTKEQPWY
EIPRQTMGMAVEIGATVSYQKYQAALGEHAKMARQLTRDLEHYYKQQLENNYELKQ"
misc_feature complement(380473..381099)
/locus_tag="Sbal_0343"
/note="1-acyl-sn-glycerol-3-phosphate acyltransferase
[Lipid metabolism]; Region: PlsC; COG0204"
/db_xref="CDD:30553"
misc_feature complement(380515..381069)
/locus_tag="Sbal_0343"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: AGPAT-like; Region:
LPLAT_AGPAT-like; cd07989"
/db_xref="CDD:153251"
misc_feature complement(order(380770..380778,380911..380922,
380965..380967,380971..380973,380980..380982))
/locus_tag="Sbal_0343"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153251"
gene complement(381335..382069)
/locus_tag="Sbal_0344"
/db_xref="GeneID:4841991"
CDS complement(381335..382069)
/locus_tag="Sbal_0344"
/note="KEGG: son:SO4366 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048746.1"
/db_xref="GI:126172597"
/db_xref="GeneID:4841991"
/translation="MQLTFSILSWGAWAPQYQHPQSWQTWCKNSAELNLDTPQSDTTA
PALKHVPAMQRRRFSRLTKMMLEVSFQCEMPANCRSIFASRHGELQRTIGLLEDIIAK
QPLSPLGFSQSVHNTASGIFGIVTANIAPSTSVAAGTETLSQAMVEAFAQLHQSPEPL
LLVFGDDPVPPVYDEFTQEFELPLALGLQLAPFDAPASVKLTVSRISESSALNPLTYG
ALLHALATAQNISGCLSQLHWKLEHV"
misc_feature complement(381350..382003)
/locus_tag="Sbal_0344"
/note="Beta-ketoacyl synthase, N-terminal domain; Region:
Ketoacyl-synt_2; pfam13723"
/db_xref="CDD:205898"
gene complement(382425..383321)
/locus_tag="Sbal_0345"
/db_xref="GeneID:4845055"
CDS complement(382425..383321)
/locus_tag="Sbal_0345"
/note="KEGG: son:SO4365 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048747.1"
/db_xref="GI:126172598"
/db_xref="GeneID:4845055"
/translation="MQVNQDDRITPQETSSSSNRFALFAIVLVVLLSAGGYYYYSGDS
DSPKLIPNAPIVLPETPPSEPMTLESAPEPETTETTPAVTETNTNSTEAPAVTEPEVV
AEPVPALAESDAFVQQKALAIIDNNVLGSALVQQDLARQFVVFVDNLAQGELTRKVSP
LKGPEKHFSVSEITNKVYLNPEGFHRYDAYVDSIAKMDEQTLMVTYKQMTPMLEEAFT
ELGYSNAKFNDRMLQAIKILLAAPIIEDPIELSSISVNYQFVDPNLEALPSAQKLLIR
MGPENTRKLKVALRKLENQLAQ"
misc_feature complement(382440..382913)
/locus_tag="Sbal_0345"
/note="Protein of unknown function (DUF3014); Region:
DUF3014; pfam11219"
/db_xref="CDD:151661"
gene complement(383520..385610)
/locus_tag="Sbal_0346"
/db_xref="GeneID:4845433"
CDS complement(383520..385610)
/locus_tag="Sbal_0346"
/note="catalyzes branch migration in Holliday junction
intermediates"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase RecG"
/protein_id="YP_001048748.1"
/db_xref="GI:126172599"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR004365"
/db_xref="InterPro:IPR004609"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:4845433"
/translation="MSANDLQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLP
LRYEDRTQIYPIAALMPGSYGTIEAEIQSTQIIQGRKRMLVCNVRDDTGSLSLRFFNF
SVAQRNAMQNGLMIRAYGEVRRGGHQAEIVHPEYKVVYPGEDVHLSDTLTPIYPTTEG
LKQASWLKLTEQALVLLEDGGLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLEL
GQHPAQQRLVQEELLAHNLSMLRLRQRSNLDAAVTMQATGQLLNPFLAALPFKPTGAQ
QRVVADIGKDLEKPHPMMRLVQGDVGSGKTLVAAMAALQAIENGYQVAMMAPTELLAE
QHATNFAAWFEPLGLKVGWLAGKLKGKVRAQSLADIESGAAQMVIGTHAIFQQHVVFS
KLALIIIDEQHRFGVHQRLGLREKGVSQGFHPHQLIMTATPIPRTLAMTAYADLDTSI
IDELPPGRTPVTTVAIADSRRNEVLERVRNAVITDKRQAYWVCTLIEESEVLECQAAE
DTAEELRLALPELNIGLVHGRLKSAEKQQIMADFKAGIIHLLVATTVIEVGVDVPNSS
LMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKAPLSHTATQRLSVLRQSNDGFI
IAQKDLEIRGPGEVLGTKQTGLAELKIADLVRDQALIPHIQKLANHVMAQAPEKVDAI
ILRWLGHKQHYVQA"
misc_feature complement(383523..385601)
/locus_tag="Sbal_0346"
/note="ATP-dependent DNA helicase RecG; Provisional;
Region: PRK10917"
/db_xref="CDD:182836"
misc_feature complement(385194..385415)
/locus_tag="Sbal_0346"
/note="RecG_wedge_OBF: A subfamily of OB folds
corresponding to the OB fold found in the N-terminal
(wedge) domain of Escherichia coli RecG. RecG is a
branched-DNA-specific helicase, which catalyzes the
interconversion of a DNA replication fork to a...; Region:
RecG_wedge_OBF; cd04488"
/db_xref="CDD:72960"
misc_feature complement(order(385197..385199,385254..385256,
385260..385262,385266..385268,385413..385415))
/locus_tag="Sbal_0346"
/note="generic binding surface II; other site"
/db_xref="CDD:72960"
misc_feature complement(order(385218..385220,385296..385298,
385311..385313,385362..385364,385380..385382))
/locus_tag="Sbal_0346"
/note="ssDNA binding site; other site"
/db_xref="CDD:72960"
misc_feature complement(384312..384728)
/locus_tag="Sbal_0346"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature complement(384693..384707)
/locus_tag="Sbal_0346"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature complement(384402..384413)
/locus_tag="Sbal_0346"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature complement(383811..384209)
/locus_tag="Sbal_0346"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature complement(order(383946..383954,384027..384032,
384096..384101,384126..384131))
/locus_tag="Sbal_0346"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature complement(order(383841..383843,383850..383852,
383862..383864,383928..383930))
/locus_tag="Sbal_0346"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
gene complement(385780..386376)
/locus_tag="Sbal_0347"
/db_xref="GeneID:4845572"
CDS complement(385780..386376)
/locus_tag="Sbal_0347"
/note="PFAM: regulatory protein, LuxR; response regulator
receiver; Bacterio-opsin activator, HTH domain protein;
Sigma-70, region 4 type 2;
KEGG: son:SO0351 DNA-binding response regulator, LuxR
family"
/codon_start=1
/transl_table=11
/product="two component LuxR family transcriptional
regulator"
/protein_id="YP_001048749.1"
/db_xref="GI:126172600"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR007050"
/db_xref="InterPro:IPR013249"
/db_xref="GeneID:4845572"
/translation="MKILLAEDQAMVRGALAALLTLAGGFNITQASDGDEALSLLKQQ
SFDLLLTDIEMPGRTGLELAAWLKDQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLK
DAPSETLVNAIQQVMAGKRVIDPELAMMAIGDVDPLNDKERRALRLASEGKSTADIAE
TLFIAEGTVRNYLSEAIAKLNASNRIDAARIAKQKGWL"
misc_feature complement(385783..386376)
/locus_tag="Sbal_0347"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:32379"
misc_feature complement(386026..386367)
/locus_tag="Sbal_0347"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(386068..386073,386080..386082,
386137..386139,386197..386199,386221..386223,
386353..386358))
/locus_tag="Sbal_0347"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(386221..386223)
/locus_tag="Sbal_0347"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(386197..386205,386209..386214))
/locus_tag="Sbal_0347"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(386065..386073)
/locus_tag="Sbal_0347"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(385795..385965)
/locus_tag="Sbal_0347"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(385822..385824,385855..385869,
385873..385878,385882..385887,385909..385917,
385954..385962))
/locus_tag="Sbal_0347"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(385795..385800,385807..385809,
385816..385824,385915..385917,385921..385923,
385927..385929))
/locus_tag="Sbal_0347"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(386376..387455)
/locus_tag="Sbal_0348"
/db_xref="GeneID:4842435"
CDS complement(386376..387455)
/locus_tag="Sbal_0348"
/note="PFAM: ATP-binding region, ATPase domain protein
domain protein; histidine kinase, dimerisation and
phosphoacceptor region;
KEGG: shn:Shewana3_3817 putative signal transduction
histidine kinase"
/codon_start=1
/transl_table=11
/product="integral membrane sensor signal transduction
histidine kinase"
/protein_id="YP_001048750.1"
/db_xref="GI:126172601"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR011712"
/db_xref="GeneID:4842435"
/translation="MISTHLQLERKLAWVYLINLVFYLIPLAINAYPAWKIALSFAVL
IPFIASYFWAYKCNQNSAYRPILMMVAIATAITPINPGSISLFTFAAFFIGFFYPLRT
CLLAIAALIGLLFALNEIYDFNSYYFPLYGSGLVLGVGMFGVAERRRHQHKLKEQQST
QEISTLAAMVERERIARDLHDIMGHSLSSIALKAELAEKLLAKQEYQLATIQLNELGQ
IARESLSQIRHTVSDYKHKVLADSVTQLCKLLREKGISVELTGNIPKLPARMESQLGL
IVTELVNNILRHSGASQCIIDFIQQADRLVVEVKDNGPSKPIAEGNGLTGIRERLDSL
GGSLSYNLEQGYAFTVSLPLQGATD"
misc_feature complement(386394..>387035)
/locus_tag="Sbal_0348"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG4585"
/db_xref="CDD:34223"
misc_feature complement(386751..386945)
/locus_tag="Sbal_0348"
/note="Histidine kinase; Region: HisKA_3; pfam07730"
/db_xref="CDD:203743"
misc_feature complement(386400..386636)
/locus_tag="Sbal_0348"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(386412..386414,386418..386423,
386436..386438,386484..386495,386508..386513,
386517..386519,386523..386525,386529..386531,
386595..386597,386604..386606,386616..386618))
/locus_tag="Sbal_0348"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(386604..386606)
/locus_tag="Sbal_0348"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(386487..386489,386493..386495,
386511..386513,386517..386519))
/locus_tag="Sbal_0348"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(387540..388244)
/locus_tag="Sbal_0349"
/db_xref="GeneID:4845425"
CDS complement(387540..388244)
/locus_tag="Sbal_0349"
/note="PFAM: Tetratricopeptide TPR_2 repeat protein;
KEGG: son:SO0353 TPR domain protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048751.1"
/db_xref="GI:126172602"
/db_xref="InterPro:IPR013105"
/db_xref="GeneID:4845425"
/translation="MKTLLIVSSLALISSHAFAASPSNANITSIDAASNSMNLAQLQQ
LSASTQDYDKAYANYRLAISANVMGQKVLASSALTNAQTALEALDTSQADAESLALLS
SVYGMQIALDNSKGATLGMKSAKAIANAEQLEPQNPRVALVKAIAAYNTPAMFGGSMQ
NAKTLATTAIERFAQPCDDICWGEAEAYTWRGLAKQELGDSQGASEDWQQAIKVQADY
GWAKFLLQQNQQLSAN"
gene complement(388459..389403)
/locus_tag="Sbal_0350"
/db_xref="GeneID:4844382"
CDS complement(388459..389403)
/locus_tag="Sbal_0350"
/note="TIGRFAM: Na+/Ca+ antiporter, CaCA family;
PFAM: sodium/calcium exchanger membrane region;
KEGG: shm:Shewmr7_0325 Na+/Ca+ antiporter, CaCA family"
/codon_start=1
/transl_table=11
/product="CaCA family Na(+)/Ca(+) antiporter"
/protein_id="YP_001048752.1"
/db_xref="GI:126172603"
/db_xref="InterPro:IPR004481"
/db_xref="InterPro:IPR004837"
/db_xref="GeneID:4844382"
/translation="MLITLSIIGGFIILTLGAEALVRGASAIALRLGITPLIIGLTIV
AFGTSAPELAVSVKSALAGNSGIALGNVIGSNIANIGLILAITALIRPIQVQSQVVKR
DIPLMILASMLFWGLLLDGELSLIDGVVLLSLLVGYLTFSYISSKNSKNEEEIEAGPN
NPLLSGLFILVGISMLVGGGILFVNGAVDLAKTFGVSEVIIGLTIVAIGTSMPELVTS
VIAALKGQSDIAIGNVVGSNLFNILGILGVTAIVHPVSSLGFQPFDFMVMLALAIVIL
PFAWTGLRIGRREGSVLLLTYLGYMGYLINQASAQALV"
misc_feature complement(388534..389385)
/locus_tag="Sbal_0350"
/note="K+-dependent Na+/Ca+ exchanger related-protein;
Region: TIGR00367"
/db_xref="CDD:211572"
misc_feature complement(389038..389370)
/locus_tag="Sbal_0350"
/note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
pfam01699"
/db_xref="CDD:190072"
misc_feature complement(388576..388881)
/locus_tag="Sbal_0350"
/note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
pfam01699"
/db_xref="CDD:190072"
gene complement(389583..391247)
/locus_tag="Sbal_0351"
/db_xref="GeneID:4844383"
CDS complement(389583..391247)
/locus_tag="Sbal_0351"
/note="PFAM: AMP-dependent synthetase and ligase;
KEGG: son:SO0355 AMP-binding protein"
/codon_start=1
/transl_table=11
/product="AMP-dependent synthetase and ligase"
/protein_id="YP_001048753.1"
/db_xref="GI:126172604"
/db_xref="InterPro:IPR000873"
/db_xref="GeneID:4844383"
/translation="MDTAIKTPIEMLAHWAKTQGDQVYLRQPIKGQFLDFTWAEVQEK
VQQLAGALQHLGLERGDKIAVLSKNCAEWFITDLALMHGGYVSVPIYPTANTDTIRYV
LQHSGAKAIFLGKLDHWADQEAGVGGELLRLAMPYDTMPAQYQWEQLLKLGYPLVDAP
LPTPDQVMTLIYTSGSTGQPKGAIQTFASYGWTCQAVVRDLRTDGNDRLLSYLPLAHI
TERVAIEGSSFYSGSVVAFVESLDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKIGV
SKLNLLLKIPLISSLVKHKIHKGLGLNHCRLLGSGSAPIPPSLIHWYHSIGLNICEAW
GMTENCAYSIINYPFDARKIGTVGRPVEDCQIRQGEDGELLLKSPGLMTAYYQQPEAT
AAAFDADGFFHTGDLCSIDADGCVTITGRVKDNFKTAKGKYVAPVPIERKLAQDPHVE
LICVIGSGLPHPVALVQLSEGANLQAREEVRTSLKATLDSVNPHLESHEHVDAIIVVS
DPWTIENDVLTPTLKIKRHVLEKAFSERVDGIRGAQVRWEDELTQK"
misc_feature complement(389628..391241)
/locus_tag="Sbal_0351"
/note="Long-chain acyl-CoA synthetases (AMP-forming)
[Lipid metabolism]; Region: FAA1; COG1022"
/db_xref="CDD:31225"
misc_feature complement(389886..391139)
/locus_tag="Sbal_0351"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
gene complement(391475..391858)
/locus_tag="Sbal_0352"
/db_xref="GeneID:4841505"
CDS complement(391475..391858)
/locus_tag="Sbal_0352"
/note="TIGRFAM: putative endoribonuclease L-PSP;
PFAM: Endoribonuclease L-PSP;
KEGG: shn:Shewana3_3813 putative endoribonuclease L-PSP"
/codon_start=1
/transl_table=11
/product="putative endoribonuclease L-PSP"
/protein_id="YP_001048754.1"
/db_xref="GI:126172605"
/db_xref="InterPro:IPR006056"
/db_xref="InterPro:IPR006175"
/db_xref="GeneID:4841505"
/translation="MAEKIIIATENAPAAIGTYSQAVKVGSTVYLSGQIPLVPSTMQI
VSDDFEAQVVQVFENLTAVCTAAGGSINDIVKLNIFLIDLSHFAKVNEIMSRYFSQPY
PARAAIGVKQLPKDSQVEMDGVMEL"
misc_feature complement(391487..391804)
/locus_tag="Sbal_0352"
/note="YjgF, YER057c, and UK114 belong to a large family
of proteins present in bacteria, archaea, and eukaryotes
with no definitive function. The conserved domain is
similar in structure to chorismate mutase but there is no
sequence similarity and no...; Region:
YjgF_YER057c_UK114_family; cd00448"
/db_xref="CDD:100004"
misc_feature complement(order(391487..391489,391493..391495,
391499..391501,391529..391552,391577..391579,
391586..391588,391619..391621,391625..391627,
391631..391636,391640..391642,391760..391765,
391769..391771,391775..391777,391784..391786,
391790..391792,391799..391804))
/locus_tag="Sbal_0352"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100004"
misc_feature complement(order(391499..391501,391544..391546,
391586..391588,391598..391600,391802..391804))
/locus_tag="Sbal_0352"
/note="putative active site [active]"
/db_xref="CDD:100004"
gene complement(391884..393989)
/locus_tag="Sbal_0353"
/db_xref="GeneID:4842179"
CDS complement(391884..393989)
/locus_tag="Sbal_0353"
/EC_number="2.7.6.5"
/note="KEGG: son:SO0359 guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase;
TIGRFAM: RelA/SpoT family protein;
PFAM: amino acid-binding ACT domain protein; TGS domain
protein; metal-dependent phosphohydrolase, HD sub domain;
RelA/SpoT domain protein;
SMART: metal-dependent phosphohydrolase, HD region"
/codon_start=1
/transl_table=11
/product="bifunctional (p)ppGpp synthetase II/
guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase"
/protein_id="YP_001048755.1"
/db_xref="GI:126172606"
/db_xref="InterPro:IPR002912"
/db_xref="InterPro:IPR003607"
/db_xref="InterPro:IPR004095"
/db_xref="InterPro:IPR004811"
/db_xref="InterPro:IPR006674"
/db_xref="InterPro:IPR007685"
/db_xref="GeneID:4842179"
/translation="MYLFEGLKESASGYLEPEQVELLKQAYQIARDAHEGQMRTSGEP
YITHPVAVAHILADMRLDHETLMAALLHDTIEDTHVTKDDLAELFGVAVAELVEGVSK
LDKLKFRDKKEAQAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIAR
ETLEIYAPIANRLGIHNIKTELEDLGFQAYYPMRYRVLKEVVKAARGNRKELIQGIEA
AVYTRLNDAGIPGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIVDSIDTCYRV
LGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVPVEIQIRTEDMDQMADKG
VAAHWAYKGGAQTGQGTTTQVRARKWMQSLLELQQSASTSFEFVENVKTELFPEEIYV
FTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVEIITA
KGARPNAAWLNFVVTGKARAKIRQVLKSLKGDDAIALGRRLLNHALGKTKLDSIPPEQ
IEKVIRDTKHTTLDSLLADIGLGNAMSIVIAQRLIGDNLENQESRDGHMMPIRGAEGM
LVTFANCCRPIPGDAVIAHVSQGKGLVVHMENCANIRGYQGEPDKYIPVQWDNVEGVD
YQANLRVEIVNHQGALAKITSIIAAECSNIHNLSTEERDGRVYLINLRISVKDRIHLA
NVMRRIRVLPEVLRTSRNR"
misc_feature complement(391887..393989)
/locus_tag="Sbal_0353"
/note="bifunctional (p)ppGpp synthetase II/
guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase;
Provisional; Region: PRK11092"
/db_xref="CDD:182957"
misc_feature complement(393492..393863)
/locus_tag="Sbal_0353"
/note="Metal dependent phosphohydrolases with conserved
'HD' motif; Region: HDc; cd00077"
/db_xref="CDD:28958"
misc_feature complement(order(393573..393575,393771..393776,
393846..393848))
/locus_tag="Sbal_0353"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:28958"
misc_feature complement(393771..393773)
/locus_tag="Sbal_0353"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28958"
misc_feature complement(392997..393326)
/locus_tag="Sbal_0353"
/note="Nucleotidyltransferase (NT) domain of RelA- and
SpoT-like ppGpp synthetases and hydrolases; Region:
NT_Rel-Spo_like; cd05399"
/db_xref="CDD:143389"
misc_feature complement(order(392997..392999,393021..393023,
393027..393029,393033..393035,393069..393071,
393081..393083,393087..393089,393093..393095,
393108..393110,393114..393116,393198..393200,
393210..393215,393276..393278,393282..393284))
/locus_tag="Sbal_0353"
/note="synthetase active site [active]"
/db_xref="CDD:143389"
misc_feature complement(order(392997..392999,393027..393029,
393033..393035,393069..393071,393081..393083,
393087..393089,393093..393095,393108..393110,
393114..393116,393282..393284))
/locus_tag="Sbal_0353"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143389"
misc_feature complement(order(393033..393035,393213..393215))
/locus_tag="Sbal_0353"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143389"
misc_feature complement(392643..392822)
/locus_tag="Sbal_0353"
/note="TGS_RelA_SpoT: The RelA (SpoT) protein, also
referred to as ppGpp hydrolase/synthetase, is a
ribosome-associated protein that is activated during amino
acid starvation and thought to mediate the stringent
response. RelA contains a TGS domain, named after...;
Region: TGS_RelA_SpoT; cd01668"
/db_xref="CDD:133438"
misc_feature complement(391893..392105)
/locus_tag="Sbal_0353"
/note="ACT domain found C-terminal of the RelA/SpoT
domains; Region: ACT_RelA-SpoT; cd04876"
/db_xref="CDD:153148"
gene complement(394035..394313)
/gene="rpoZ"
/locus_tag="Sbal_0354"
/db_xref="GeneID:4844146"
CDS complement(394035..394313)
/gene="rpoZ"
/locus_tag="Sbal_0354"
/EC_number="2.7.7.6"
/note="promotes RNA polymerase assembly or stability;
latches the N- and C-terminal regions of the beta' subunit
thereby facilitating its interaction with the beta and
alpha subunits"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit omega"
/protein_id="YP_001048756.1"
/db_xref="GI:126172607"
/db_xref="InterPro:IPR003716"
/db_xref="InterPro:IPR006110"
/db_xref="GeneID:4844146"
/translation="MARVTVEDAVEQIGNRFDMILVAARRARQIAVQGKDPMVEEMND
KPTVIALREIELGLVNAHTLDADERQTVREREAAEIAAVSAIAEGRSL"
misc_feature complement(394104..394313)
/gene="rpoZ"
/locus_tag="Sbal_0354"
/note="DNA-directed RNA polymerase subunit omega;
Reviewed; Region: rpoZ; PRK00392"
/db_xref="CDD:178998"
gene complement(394363..394995)
/gene="gmk"
/locus_tag="Sbal_0355"
/db_xref="GeneID:4844147"
CDS complement(394363..394995)
/gene="gmk"
/locus_tag="Sbal_0355"
/EC_number="2.7.4.8"
/note="Essential for recycling GMP and indirectly, cGMP"
/codon_start=1
/transl_table=11
/product="guanylate kinase"
/protein_id="YP_001048757.1"
/db_xref="GI:126172608"
/db_xref="InterPro:IPR008144"
/db_xref="InterPro:IPR008145"
/db_xref="GeneID:4844147"
/translation="MTARGNLFIVSAPSGAGKSSLISALLKDKPADMQVSVSHTTRAP
RPGEVDGQHYHFVNVEQFKALIAENAFFEWAEVFGNYYGTSRHVIEHTLTQGIDVFLD
IDWQGAEQVKAVMPDAVGVFILPPSKAELERRLTGRGQDSSDVIASRMAQAVSEMSHY
KEYDFIIVNDDFDTALADLRAIIRSQRLTCASQIHAQNDMLNDLLAGQLS"
misc_feature complement(394429..394992)
/gene="gmk"
/locus_tag="Sbal_0355"
/note="Guanylate kinase [Nucleotide transport and
metabolism]; Region: Gmk; COG0194"
/db_xref="CDD:30543"
misc_feature complement(394456..394977)
/gene="gmk"
/locus_tag="Sbal_0355"
/note="Guanosine monophosphate kinase (GMPK, EC 2.7.4.8),
also known as guanylate kinase (GKase), catalyzes the
reversible phosphoryl transfer from adenosine triphosphate
(ATP) to guanosine monophosphate (GMP) to yield adenosine
diphosphate (ADP) and guanosine...; Region: GMPK; cd00071"
/db_xref="CDD:73180"
misc_feature complement(order(394750..394752,394765..394767,
394834..394836,394861..394863,394870..394872,
394891..394893,394942..394944,394960..394962))
/gene="gmk"
/locus_tag="Sbal_0355"
/note="catalytic site [active]"
/db_xref="CDD:73180"
misc_feature complement(order(394942..394944,394960..394962))
/gene="gmk"
/locus_tag="Sbal_0355"
/note="G-X2-G-X-G-K; other site"
/db_xref="CDD:73180"
gene 395248..396894
/locus_tag="Sbal_0356"
/db_xref="GeneID:4841989"
CDS 395248..396894
/locus_tag="Sbal_0356"
/note="KEGG: shn:Shewana3_3809 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048758.1"
/db_xref="GI:126172609"
/db_xref="GeneID:4841989"
/translation="MLLKSLFCLHGRDSRPRFVAISVGVYVCIALAAAAFGANFLMYL
LALLGLPLLGLASLRRLADADKSKGLIGVFLLPLFIFIGLLTADVHIALIGLSLVLAA
GLTFWGWRFPAPTIVDYRYGYFGPELDAPTSQAMPRRRVEPTIVPKAAAKEIETQDVA
ARQAAKSTAHIQAQPQVERHEPHVEQSHAQAISAATASEPEVDLSAHVEPIASEPIVA
ESTVAEPIVASTMSAADAELEAQRQDELRFDALTRMTQNPADFVVPDSHADFRPANAS
RIEQTNIDLVDVDVANVDLKHVDFNAAQLDPAERSTEPGWRFAAEEDDEPDSFNDRDH
AEEVRQRRAEAKDSGSMTELFRGLFEFLAPLKRFFVLPKIKLPKLERRYWRPAGIGCG
VVVVLALVWGLWPNGDAETGDGAEVVTVNAIAPYAGERVTLALPDGFSVALEDDILIM
RWLGEKGKAQNLWSLATAKGDKTCSLLSFNNGTDYRPVTVDLKADSATEARFTPLDTQ
AIIVDLARRGSISLCGYKFSLKGSQAILEQNRTFGDYIAR"
misc_feature <395635..396066
/locus_tag="Sbal_0356"
/note="ribonuclease E; Reviewed; Region: rne; PRK10811"
/db_xref="CDD:182751"
gene 397099..397971
/locus_tag="Sbal_0357"
/db_xref="GeneID:4845382"
CDS 397099..397971
/locus_tag="Sbal_0357"
/note="KEGG: she:Shewmr4_3611 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048759.1"
/db_xref="GI:126172610"
/db_xref="GeneID:4845382"
/translation="MNTELTLVIMAAGLGSRFGGDKQLAALGPAGEPMLVLSIMSAIR
SGFQRAVLVIRPELETELTEILTRFLPADFAYHFCYQALTDLPEAAQLADISHRLKPW
GTAHALWSARHLVKGPMAVINADDFYGDSAFASLAKGLSMRPTEWMMVAYPIELTLSE
HGGVNRGLCQVENGQLKSVAEWLNIAEQAGELVGDGPQGHASLPPASLVSMTCWGFSP
SIFDVIKRELTEFIGQQDQQPKSECYLPAIVQAGIEQGLPVYVDVACEPWLGVTYPQD
TVWVKQKLTELLSD"
misc_feature 397111..>397266
/locus_tag="Sbal_0357"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:212311"
misc_feature 397120..>397926
/locus_tag="Sbal_0357"
/note="Nucleoside-diphosphate-sugar pyrophosphorylase
involved in lipopolysaccharide biosynthesis/translation
initiation factor 2B, gamma/epsilon subunits
(eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis,
outer membrane / Translation, ribosomal structure...;
Region: GCD1; COG1208"
/db_xref="CDD:31401"
misc_feature order(397126..397128,397132..397134,397252..397254)
/locus_tag="Sbal_0357"
/note="active site"
/db_xref="CDD:132997"
gene 397964..399028
/locus_tag="Sbal_0358"
/db_xref="GeneID:4843369"
CDS 397964..399028
/locus_tag="Sbal_0358"
/note="PFAM: aminoglycoside phosphotransferase;
KEGG: shm:Shewmr7_0333 aminoglycoside phosphotransferase"
/codon_start=1
/transl_table=11
/product="aminoglycoside phosphotransferase"
/protein_id="YP_001048760.1"
/db_xref="GI:126172611"
/db_xref="InterPro:IPR002575"
/db_xref="GeneID:4843369"
/translation="MIKLIRQSVLPHFGIEAAEAKISALGNGHINDTLLVRWPAGELV
LQRINTEVFKTPNALVSNADKISHHLCAKSLQQQYGLKVVSPCLTREGELAIDLGEQG
FWRAISYLPHSLSIEVVKSEQEAEMAAKAFGHFASALSDFDATQLEDVIPQFHHLPGR
MALLQQAAELDSQHRLDLCRHWVDYALSQQALLDELAEISPKLPLRICHNDTKINNML
FDKRDMSSMAIIDLDTCMKGHLMYDFGDMVRTFCSPEEEDSTALDKVEVRQDIFAAIC
RGYLSELGDVLTEDEKRSLWLGARVICLMIGVRFLTDYLNGDVYFHIHREGHNLDRAA
NQFTLYQSLLDQETVLKAHF"
misc_feature 398024..398734
/locus_tag="Sbal_0358"
/note="Phosphotransferase enzyme family; Region: APH;
pfam01636"
/db_xref="CDD:201896"
misc_feature <398201..398875
/locus_tag="Sbal_0358"
/note="Protein Kinases, catalytic domain; Region:
PKc_like; cl09925"
/db_xref="CDD:213116"
misc_feature order(398594..398596,398711..398713)
/locus_tag="Sbal_0358"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:88612"
gene 399211..400626
/locus_tag="Sbal_0359"
/db_xref="GeneID:4843370"
CDS 399211..400626
/locus_tag="Sbal_0359"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: she:Shewmr4_3609 twin-arginine translocation pathway
signal"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily transporter"
/protein_id="YP_001048761.1"
/db_xref="GI:126172612"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:4843370"
/translation="MDSPVAQPLVTCSRRSERNSWLRCTLRRSQQEAVASSMMTATSD
NFFNAYAIFLGASLAQMGFVTGLPQLFGAISQLLSVWLASHFSRRTFIVFCAAFQACV
VLAMGALAAFGPEHAVWIFIALAVGYHGFINLIQPHWRAWMGSIVPERRRGTFFAART
RLTMGASLSVFFIGGGILTLTDSMQMAWLGFSLLFSIAAMGRFVSAWLLLQMHDPDPR
EPKQRGIFLQTIGHFREAWKDKVFRQYSLFVASMQGMVAISAPFFAVYMLEGLKFTYL
EFVFASVASIATQFVTLRFWGRFSDQFGNRLVMIITSCMIPSLPLMWLFSDNYLYILA
IQAFSGLAWSGFTLSTANYLYDIRPFRSDFATYAALQAALSAACVFVGAILGGTIASH
AADFLVWSGWDSVLSSPIFVVFLVSTVLRALVTLWFIPRSVEPKLRPRPQLLQLIFRI
RGFNAISGVSLDWLTVVKRRK"
misc_feature 399310..400458
/locus_tag="Sbal_0359"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(399328..399330,399337..399345,399349..399354,
399403..399405,399412..399417,399424..399426,
399436..399441,399445..399450,399604..399609,
399616..399621,399628..399633,399640..399642,
399700..399705,399712..399717,399733..399735,
399967..399969,399976..399981,399988..399993,
400000..400002,400042..400044,400054..400056,
400066..400068,400075..400077,400087..400089,
400231..400233,400240..400245,400252..400254,
400264..400269,400276..400278,400309..400314,
400321..400326,400333..400338,400345..400347)
/locus_tag="Sbal_0359"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature 399370..400293
/locus_tag="Sbal_0359"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
gene complement(400639..401556)
/locus_tag="Sbal_0360"
/db_xref="GeneID:4844023"
CDS complement(400639..401556)
/locus_tag="Sbal_0360"
/note="KEGG: sfr:Sfri_3844 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048762.1"
/db_xref="GI:126172613"
/db_xref="GeneID:4844023"
/translation="MPDNANNSPITTHVQPTGNAKHTGHSQVATPDEMNPEQSSTLSS
EQASVEKQKVFIIGLPRTGTTSVSVALLEQGLKVAHMAFTKQAFMLADAISDVPCFSD
YRQLDGLFPQAKFVYLDREMAKWVPSMQMLLGKMLPHLEAKSGRFHPIMKRSFRHTFA
IDKVADPVDEAHLIACYQRHQNEVLAYFHGREDFITLDISHAGSLSRLLQFLGLTTDC
PTLGQVTDRAFSDSQIKSAPSQISQEGTSQAKAAVQPQPVNTSEHGLDFPKLNAGTHV
AAWHEYKHPNKVNSNSAGPQSRKFFDYTL"
misc_feature complement(<401050..401403)
/locus_tag="Sbal_0360"
/note="Sulfotransferase family; Region: Sulfotransfer_3;
pfam13469"
/db_xref="CDD:205647"
gene 402200..403315
/locus_tag="Sbal_0361"
/db_xref="GeneID:4844778"
CDS 402200..403315
/locus_tag="Sbal_0361"
/note="PFAM: filamentation induced by cAMP protein Fic;
KEGG: shm:Shewmr7_0336 filamentation induced by cAMP
protein Fic"
/codon_start=1
/transl_table=11
/product="filamentation induced by cAMP protein fic"
/protein_id="YP_001048763.1"
/db_xref="GI:126172614"
/db_xref="InterPro:IPR003812"
/db_xref="GeneID:4844778"
/translation="MWIWQQADWPKFHWNTSSIDALLRQVYFNQGQLLGKQMLSHDDS
LLTSDAALDTLLANIIHSSAIEGEKLNAASVRSSLAKKLGVTEDKPYPTTAQTDGLAD
IMLDALKNLETELTLERILGWHQQLFPQGYTLFNPVIGGTLRGDTPMQVVSGRIDKPT
VHFEAPSRATLDAELSQFIEWFNASRQDLGLDPLIRAAITHLWFVTLHPLDDGNGRIT
RLLTDLALAQAEKRSIRFYAMSVSILARRQAYYDILESTQRGDVDITPWLVWFFETLN
DCLLNAMADVSRTLSKTQYWQSVDQSLLSQEQAKVLNRMLDGDFELGINSSQYQKVAK
VSRATATRHLAQMVEQRFLVKADAGGRSTRYLLPSGK"
misc_feature 402203..403294
/locus_tag="Sbal_0361"
/note="Fic family protein [Function unknown]; Region:
COG3177"
/db_xref="CDD:32990"
misc_feature 402203..402454
/locus_tag="Sbal_0361"
/note="Domain of unknown function (DUF4172); Region:
DUF4172; pfam13776"
/db_xref="CDD:205949"
misc_feature 402542..402877
/locus_tag="Sbal_0361"
/note="Fic/DOC family; Region: Fic; pfam02661"
/db_xref="CDD:202334"
gene 403540..406707
/locus_tag="Sbal_0362"
/db_xref="GeneID:4842124"
CDS 403540..406707
/locus_tag="Sbal_0362"
/note="PFAM: helicase domain protein; type III restriction
enzyme, res subunit;
SMART: DEAD-like helicases-like;
KEGG: son:SO0368 helicase"
/codon_start=1
/transl_table=11
/product="type III restriction enzyme, res subunit"
/protein_id="YP_001048764.1"
/db_xref="GI:126172615"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR006935"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:4842124"
/translation="MEQVGIYEKLITQLVEKRLDKDIFFVGERKLEVAEASIWLSRFL
TKVIEYVINSVPADENQVINQISLANRLVMWLKEHINDDDFIDENLIDSQGRILTALF
NKQNPIATDLPKYTAAIFPLTGLTQSELFCGSNAGLSLESELKREIRSSDKIYWLVSF
IKWAGIRIFKNELEEFTRSGKELRIITTSYMGATDAKAVEFLASLPNTQVKLSYNTKR
ERLHAKSYLFLRNTGFHTGYIGSSNLSHSALTSGLEWNLKITTQEIPHIIEKSLSTFE
TYWESNEFELFSGDASSKEKLNNALKEAKGSGTESSSFHFDIKPFAHQREILEQLAVE
RSVHGRFKNLIVAATGTGKTIISAFDFARFYKLHPDANFLFVAHRQEILQQALSAYRG
VLKNNQFGELWVAEHKPNSYKHLFASIQSLNLQLDNLPLAADFYDYIVIDEVHHVAAS
SYRGLLAHFEPTILLGLTATPERHDGVDILADFCGVIAAEIRLPEAINQRHLCPFQYF
AIDDETDLRKLNWSRGRYDVAELSNLYTHNEQRVTRIIRSLAETVTDIGNIKALAFCV
TKEHAEFMAKKFNLDGISADVLTSDNSSERQQKRQSLVSGKLSILCVVDIFNEGVDIP
EVDTLLFLRPTESLTIFLQQLGRGLRLTDDKQCCTILDFVGNSRDEYDFSQKFRALVG
KTNQSIKDEILNDFPHLPLGCRIELEEKAQSMILRNISRATLNANRLTSLIASYKHQT
NLPLTLGNFLRLNPQVTLEDVYRIKINGQCGWTLLVEAIQGNQIAGPTAQSDLAKAYY
RAINFHLLSCTSLSYLIFIKQLCQNDFVFNGLDPIQNQFALMCHYNFWDKSGTALNVN
SLAASLLMLRNKPLQEELLAVLAILINRIHHQEMDLELALPSALKVHSRYTREQILAA
IGASTFTAKSPSREGVLAIHEQNLECLFVTLNKSEKQFSPTTMYHDYAISEHLFHWQS
QNSARPERGRGLSYIEQQKLGKTVLLFVREQSKDENGRTMGFVNFGKVHYVSHNGSQP
MNVTWRLEQPIPDVMWHDAAKLAVG"
misc_feature 403951..404379
/locus_tag="Sbal_0362"
/note="N-terminal putative catalytic domain of
uncharacterized prokaryotic and archeal HKD family
nucleases fused to a DEAD/DEAH box helicase domain;
Region: PLDc_N_DEXD_b1; cd09203"
/db_xref="CDD:197297"
misc_feature 403969..404376
/locus_tag="Sbal_0362"
/note="PLD-like domain; Region: PLDc_2; pfam13091"
/db_xref="CDD:205272"
misc_feature order(404197..404214,404254..404256,404260..404262,
404266..404268,404290..404304,404308..404310,
404314..404316)
/locus_tag="Sbal_0362"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:197297"
misc_feature order(404203..404205,404209..404211,404260..404262,
404266..404268,404299..404301)
/locus_tag="Sbal_0362"
/note="putative active site [active]"
/db_xref="CDD:197297"
misc_feature 404203..404205
/locus_tag="Sbal_0362"
/note="catalytic site [active]"
/db_xref="CDD:197297"
misc_feature 404485..405582
/locus_tag="Sbal_0362"
/note="DNA or RNA helicases of superfamily II
[Transcription / DNA replication, recombination, and
repair]; Region: SSL2; COG1061"
/db_xref="CDD:31261"
misc_feature 404569..404952
/locus_tag="Sbal_0362"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 404587..404601
/locus_tag="Sbal_0362"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 404863..404874
/locus_tag="Sbal_0362"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature 405127..405510
/locus_tag="Sbal_0362"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(405235..405246,405304..405309,405379..405387)
/locus_tag="Sbal_0362"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(405403..405405,405466..405468,405478..405480,
405487..405489)
/locus_tag="Sbal_0362"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
misc_feature 405934..406692
/locus_tag="Sbal_0362"
/note="Domain of unknown function (DUF3427); Region:
DUF3427; pfam11907"
/db_xref="CDD:152343"
gene complement(406711..407607)
/locus_tag="Sbal_0363"
/db_xref="GeneID:4843283"
CDS complement(406711..407607)
/locus_tag="Sbal_0363"
/note="PFAM: regulatory protein, LysR; LysR,
substrate-binding;
KEGG: shn:Shewana3_3800 transcriptional regulator, LysR
family"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_001048765.1"
/db_xref="GI:126172616"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:4843283"
/translation="MEHFSALPIFVTVVECGSFSLASQKLGLSKSAVSKRITLLEQSL
GIQLLHRTTRSLSLTEAGARYFDYVRPAVKLAADGLDAISELQQAPQGSLRIAVPMVF
GRLYIAPLIPEFLRRYPKIQLQMQMDDKTTDLIAGGFDLAIRIGELPDSSLIARKIAP
CLSVICASPEYLARHTVPHTPQQLSQHNCLFYSYFRDGVEWTFLSPQGPTRIQPNGNY
QVNNSDAIHQATLDGLGIANLPHFMVEADLQTGRLQALLTDHPLPEHGIYAVYPQRKY
LPTKVSVLIEFLMEKLAERLGK"
misc_feature complement(406738..407607)
/locus_tag="Sbal_0363"
/note="transcriptional regulator; Provisional; Region:
PRK10632"
/db_xref="CDD:182601"
misc_feature complement(407422..407598)
/locus_tag="Sbal_0363"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(406744..407334)
/locus_tag="Sbal_0363"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulator CrgA and its related
homologs, contains the type 2 periplasmic binding domain;
Region: PBP2_CrgA_like; cd08422"
/db_xref="CDD:176114"
misc_feature complement(order(406807..406809,406888..406890,
406939..406941,407125..407127,407131..407133,
407173..407175,407290..407292,407302..407304))
/locus_tag="Sbal_0363"
/note="putative effector binding pocket; other site"
/db_xref="CDD:176114"
misc_feature complement(order(406912..406914,406921..406926,
406945..406959,407044..407046,407227..407247,
407251..407253,407263..407265,407272..407277,
407281..407286,407296..407301))
/locus_tag="Sbal_0363"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176114"
gene 407847..408584
/locus_tag="Sbal_0364"
/db_xref="GeneID:4842593"
CDS 407847..408584
/locus_tag="Sbal_0364"
/EC_number="3.1.3.5"
/note="manganese-dependent 5'-nucleotidase; specific for
5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid
dehalogenase (HAD)-like hydrolase superfamily"
/codon_start=1
/transl_table=11
/product="nucleotidase"
/protein_id="YP_001048766.1"
/db_xref="GI:126172617"
/db_xref="InterPro:IPR005833"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006402"
/db_xref="InterPro:IPR006439"
/db_xref="GeneID:4842593"
/translation="MPLNGMGMGFSYFVRKRVPMSLPYQWILFDADETLFYFDALKGL
KLMFSEFGVDFTQADFDEYQLVNKPLWVDYQDGKITAAELQTIRFEPWAAKLAVTAMT
LNSAFLSAMAEICSPLPGARELLAALQGKAKLGIITNGFTELQTVRLERTGLQHHFDI
LVISEKVGIAKPDVGIFEHAFELMGYPERETVLMVGDNPHSDIQGGINAGIHTCWYNV
HGHDVPAGITPHYQVSSHQELHSLLFG"
misc_feature 407910..408581
/locus_tag="Sbal_0364"
/note="dUMP phosphatase; Provisional; Region: PRK09449"
/db_xref="CDD:181865"
misc_feature 408153..408491
/locus_tag="Sbal_0364"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature 408258..408260
/locus_tag="Sbal_0364"
/note="motif II; other site"
/db_xref="CDD:119389"
gene complement(408619..409257)
/locus_tag="Sbal_0365"
/db_xref="GeneID:4844884"
CDS complement(408619..409257)
/locus_tag="Sbal_0365"
/note="PFAM: helix-hairpin-helix motif; ERCC4 domain
protein;
SMART: Helix-hairpin-helix DNA-binding, class 1;
KEGG: sdn:Sden_0291 ERCC4"
/codon_start=1
/transl_table=11
/product="ERCC4 domain-containing protein"
/protein_id="YP_001048767.1"
/db_xref="GI:126172618"
/db_xref="InterPro:IPR000445"
/db_xref="InterPro:IPR003583"
/db_xref="InterPro:IPR006166"
/db_xref="GeneID:4844884"
/translation="MAAAKIPLFYDDREHAEKIIYELSLHEDLSLIKKRLKLGDYQLK
DWIIERKTLPDLVQSLCDGRLFSQVARLAQSPNHTALLIEGCTQDIACYQIRREALIG
ALCSITINFYIPILRSLSQAETAKILYFCANQLNRREHELTLTGRKPKRTKNQQLFIL
QSLPEVGPKLANKLLCHFASVEAVVTASEEALMQVGGIGKNKASKIREVLTR"
misc_feature complement(409003..409227)
/locus_tag="Sbal_0365"
/note="ERCC4 domain; Region: ERCC4; smart00891"
/db_xref="CDD:197959"
gene 409439..410572
/locus_tag="Sbal_0366"
/db_xref="GeneID:4843546"
CDS 409439..410572
/locus_tag="Sbal_0366"
/note="KEGG: shm:Shewmr7_3560 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048768.1"
/db_xref="GI:126172619"
/db_xref="GeneID:4843546"
/translation="MSEYQYYRFECVNSSLSVPQRNRLRNISSRAEITSHSFCVQYHY
GDLSADPEALMMVFFDIGFYYTNWGQVNAYLKLPAGTIPSDFKAINADFYVSFVENKQ
NQLLIFTLEDDYRYRDDESAESFMLHLVALRTELLTGDYRALYFHWLSQANDDMALEP
LPLIAFDFQQLTQAQLAFTTLFDIPLPSIRALHLLLQSMPAHVPQTTVLTAQQQVAKL
TDAEKDALLCRLFDEGKIFAADAYALLRTQETPIEYSHWVTVASLHPFWHVAEKEVMQ
EDRMAEAERLARETLLRNEHLEAVYKAHQSHWDSAFEEAARGCASGYDNASRTLQVLF
DAYQLKQSSSEFKQNFDVFISKNKQRKALIKRLEPLQKIMLSL"
gene 410962..411243
/locus_tag="Sbal_0367"
/db_xref="GeneID:4843547"
CDS 410962..411243
/locus_tag="Sbal_0367"
/note="PFAM: helix-turn-helix domain protein;
KEGG: sdn:Sden_0306 transciptional regulator"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_001048769.1"
/db_xref="GI:126172620"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:4843547"
/translation="MKVTNAKQLSTYLKDARLNAHLTQSKVASKVGIRQDTVSSFELN
PDSTKLETLFKIFSALNLELDIKVRNPQLVDERRHDDATVPEQEWREEW"
misc_feature 410998..411156
/locus_tag="Sbal_0367"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(411001..411003,411013..411015,411088..411090)
/locus_tag="Sbal_0367"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(411010..411012,411085..411087)
/locus_tag="Sbal_0367"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(411031..411036,411067..411069,411076..411078,
411088..411093)
/locus_tag="Sbal_0367"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene 411243..411404
/locus_tag="Sbal_0368"
/pseudo
/db_xref="GeneID:4842754"
gene complement(411479..412342)
/locus_tag="Sbal_0369"
/db_xref="GeneID:4843445"
CDS complement(411479..412342)
/locus_tag="Sbal_0369"
/note="PFAM: YicC N-terminal domain protein; domain of
unknown function DUF1732;
KEGG: shm:Shewmr7_0351 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048770.1"
/db_xref="GI:126172621"
/db_xref="InterPro:IPR005229"
/db_xref="InterPro:IPR013527"
/db_xref="InterPro:IPR013551"
/db_xref="GeneID:4843445"
/translation="MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRS
FEPVLRDRLRKRLSRGKVEVNLRYELADNSNNELQLNQALAKQLLGAANWLKQEAGQG
DVNLTDILRWPGVLASGEQDMDAIGADLMTAFDSAIDQFIEARGREGEAIKDMLLSRL
DGVSEQIAVVREHMPTVMLYQREKLTNRLAEIKGELDPARIEQEMVLLAQKQDVAEEM
DRLEAHVAEARRILKKGGSEGRRLDFMMQEFNRESNTLASKSISTEITSAAVELKVLI
EQMREQIQNVE"
misc_feature complement(411482..412342)
/locus_tag="Sbal_0369"
/note="hypothetical protein; Provisional; Region:
PRK11820"
/db_xref="CDD:183325"
misc_feature complement(411878..412339)
/locus_tag="Sbal_0369"
/note="YicC-like family, N-terminal region; Region:
YicC_N; pfam03755"
/db_xref="CDD:146410"
misc_feature complement(411482..411739)
/locus_tag="Sbal_0369"
/note="Domain of unknown function (DUF1732); Region:
DUF1732; pfam08340"
/db_xref="CDD:149411"
gene 412880..413593
/gene="rph"
/locus_tag="Sbal_0370"
/db_xref="GeneID:4845053"
CDS 412880..413593
/gene="rph"
/locus_tag="Sbal_0370"
/EC_number="2.7.7.56"
/note="RNase PH; tRNA nucleotidyltransferase; forms
hexamers in Bacillus subtilis; phosphoroltic 3'-5'
exoribonuclease; involved in maturation of tRNA precursors
and removes terminal nucleotides near CCA acceptor arms of
mature tRNAs"
/codon_start=1
/transl_table=11
/product="ribonuclease PH"
/protein_id="YP_001048771.1"
/db_xref="GI:126172622"
/db_xref="InterPro:IPR001247"
/db_xref="InterPro:IPR002381"
/db_xref="GeneID:4845053"
/translation="MRPSNRTPAQTRPITITRQFTAHAEGSVLVEFGETKVLCTASFT
EGVPRFLKGQGQGWVTAEYGMLPRSTHSRMDREAARGKQSGRTQEIQRLIGRALRACV
DMKALGENTIVIDCDVIQADGGTRTASITGACVALVDALNWARGKGIIKSNPLKFLIA
AVSVGIYKGEAISDLEYIEDSAAETDMNVVMTETGKIIEIQGTAEGEPFSHEELLELL
ALAKNSIREIVDVQKAALN"
misc_feature 412880..413587
/gene="rph"
/locus_tag="Sbal_0370"
/note="ribonuclease PH; Reviewed; Region: rph; PRK00173"
/db_xref="CDD:178914"
misc_feature 412907..413587
/gene="rph"
/locus_tag="Sbal_0370"
/note="Ribonuclease PH; Region: RNase_PH_bact; cd11362"
/db_xref="CDD:206767"
misc_feature order(412937..412951,412979..412981,412985..412987,
412991..412993,412997..412999,413003..413005,
413063..413065,413069..413071,413075..413092,
413096..413098,413105..413110,413132..413137,
413141..413146,413153..413155,413165..413167,
413174..413176,413216..413218,413222..413224,
413228..413230,413234..413242,413465..413479,
413483..413485,413489..413506,413510..413512,
413519..413524,413531..413536,413543..413545)
/gene="rph"
/locus_tag="Sbal_0370"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:206767"
misc_feature order(413072..413074,413135..413137,413240..413257,
413417..413419,413435..413437)
/gene="rph"
/locus_tag="Sbal_0370"
/note="active site"
/db_xref="CDD:206767"
gene 413770..414411
/gene="pyrE"
/locus_tag="Sbal_0371"
/db_xref="GeneID:4841622"
CDS 413770..414411
/gene="pyrE"
/locus_tag="Sbal_0371"
/EC_number="2.4.2.10"
/note="involved in fifth step of pyrimidine biosynthesis;
converts orotidine 5'-phosphate and diphosphate to orotate
and 5-phospho-alpha-D-ribose 1-diphosphate"
/codon_start=1
/transl_table=11
/product="orotate phosphoribosyltransferase"
/protein_id="YP_001048772.1"
/db_xref="GI:126172623"
/db_xref="InterPro:IPR000209"
/db_xref="InterPro:IPR000836"
/db_xref="InterPro:IPR002375"
/db_xref="InterPro:IPR004467"
/db_xref="GeneID:4841622"
/translation="MKAYQREFIEFALERQVLRFGEFTLKSGRISPYFFNAGLFNTGR
DLARLGRFYAAALVDSGIDFDLLFGPAYKGIPIATTTAVALCEHHDIDIPYCFNRKEK
KDHGEGGSLVGSELKGRVMLVDDVITAGTAIRESMEIIEAHKAQLAGVLIALDRQEKG
KGELSAIQEVERDFGCGIVAIIKLADLISYLSEKPGMEVQLAAVSQYREQYGI"
misc_feature 413914..414267
/gene="pyrE"
/locus_tag="Sbal_0371"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(413980..413982,413986..413988,414139..414147,
414151..414165,414235..414237)
/gene="pyrE"
/locus_tag="Sbal_0371"
/note="active site"
/db_xref="CDD:206754"
gene complement(414589..415239)
/gene="folE"
/locus_tag="Sbal_0372"
/db_xref="GeneID:4844469"
CDS complement(414589..415239)
/gene="folE"
/locus_tag="Sbal_0372"
/EC_number="3.5.4.16"
/note="involved in the first step of tetrahydrofolate
biosynthesis; catalyzes the formation of formate and
2-amino-4-hydroxy-6-(erythro-1,2,
3-trihydroxypropyl)dihydropteridine triphosphate from GTP
and water; forms a homopolymer"
/codon_start=1
/transl_table=11
/product="GTP cyclohydrolase I"
/protein_id="YP_001048773.1"
/db_xref="GI:126172624"
/db_xref="InterPro:IPR001474"
/db_xref="GeneID:4844469"
/translation="MALSEAAVKVQAALLERGLETPMLPSVYSSEERKDKIEHHMKEI
LTLMSLDLSDDSLADTPRRIAKMYVDEIFSGLDYANFPKITVIDNKMGFDEMVRVQDI
SLTSTCEHHLVTIDGTATIAYLPRKKIIGLSKINRIVRFFAQRPQVQERLTQQVLVAL
QTLLETKDVAVKMDAVHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLHQSK"
misc_feature complement(414601..415152)
/gene="folE"
/locus_tag="Sbal_0372"
/note="GTP cyclohydrolase I; Provisional; Region: folE;
PRK09347"
/db_xref="CDD:181789"
misc_feature complement(414604..415131)
/gene="folE"
/locus_tag="Sbal_0372"
/note="GTP cyclohydrolase I; Provisional; Region:
PLN03044"
/db_xref="CDD:178607"
misc_feature complement(order(414652..414654,414721..414723,
414889..414891,414895..414897))
/gene="folE"
/locus_tag="Sbal_0372"
/note="active site"
/db_xref="CDD:29764"
gene complement(415510..417498)
/locus_tag="Sbal_0373"
/db_xref="GeneID:4844861"
CDS complement(415510..417498)
/locus_tag="Sbal_0373"
/note="PFAM: peptidase S15; peptidase S9, prolyl
oligopeptidase active site domain protein; dienelactone
hydrolase;
KEGG: shm:Shewmr7_0355 peptidase S9, prolyl oligopeptidase
active site domain protein"
/codon_start=1
/transl_table=11
/product="peptidase S9 prolyl oligopeptidase"
/protein_id="YP_001048774.1"
/db_xref="GI:126172625"
/db_xref="InterPro:IPR000383"
/db_xref="InterPro:IPR001375"
/db_xref="InterPro:IPR002470"
/db_xref="InterPro:IPR002925"
/db_xref="GeneID:4844861"
/translation="MKPFQLATLVTLCLPMLPLNTFAADTTASNTVLLAQQFSKGDEY
SNVKISPTGKYLSAITSVEGKNVLLVLDTQTKKLLNAIRFPSNAQVGDYEWANSERLV
LAKEYLKGWRDVPQYYGELLAINADGSRKAYLFGFESGEQQTGSNIKKNTAINATAFI
LDPLPDDERYMLVNAIPWNDRINLDFELSQDVYRVDLFTGVRKRITGSPIGQARFMTD
HQGEVRFVAGEDNKNITKVFYRKDGNWVNTDKLNLGLADFKPLSFTDDKNTIYAAGRS
QGETLGVYKINLETGDKTEIIQDENVDPSNFWINGTNKQLYAVEFENGYPSYAFVDNE
DSHAKLLKDLLGALPGHQVRIVSETRDAEKLVVVAFNDRNPGDYYIFDTKKLKLEYLA
AAKKWLDPEQMAEVKPISFTSRDGKQLHGYLTLPFGKEAKNLPLVVNPHGGPHGIRDW
WGFDPQNQYLASQGIAVLQVNFRGSGGYGDQFERAGYQKWGSEIQYDIIDGTQYVIDQ
GFADKERICIVGGSFGGYSALQSAVLAPDMFKCAIGVAGVYDLELMFDEGDVASRRSG
TSYLKDVLGQDKAVLKAMSPSENVDKLKANILLVHGGEDERAPIEQLESLEKGLKAHN
YPYQKLVMDNEGHGFYNDEHRAKYYEQMLSFLKTNLKL"
misc_feature complement(415516..417408)
/locus_tag="Sbal_0373"
/note="Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
[Amino acid transport and metabolism]; Region: DAP2;
COG1506"
/db_xref="CDD:31695"
misc_feature complement(415516..416148)
/locus_tag="Sbal_0373"
/note="Prolyl oligopeptidase family; Region: Peptidase_S9;
pfam00326"
/db_xref="CDD:201156"
gene complement(417634..418227)
/gene="slmA"
/locus_tag="Sbal_0374"
/gene_synonym="ttk"
/db_xref="GeneID:4843466"
CDS complement(417634..418227)
/gene="slmA"
/locus_tag="Sbal_0374"
/gene_synonym="ttk"
/note="FtsZ binding protein; synthetically lethal with a
defect in the Min system; this protein is the first
identified nucleoid occlusion factor which works along
with the Min system to properly position the FtsZ ring
assembly"
/codon_start=1
/transl_table=11
/product="nucleoid occlusion protein"
/protein_id="YP_001048775.1"
/db_xref="GI:126172626"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:4843466"
/translation="MAVSPKINRREHILQCLAQMLETNPGQRITTAKLASEVGVSEAA
LYRHFPSKARMFEGLIEFIEESLLSRINLIMDDEKDTMKRCQLVLQLLLIFAERNPGI
SRVLNGDALLGENERLRSRISNLFAKIETQLKQILREKTLREGKGFNLDEAILANLLL
AFAEGRIAQFVRSEFKLKPTTHFDEQWRFIQHQLLQS"
misc_feature complement(417652..418227)
/gene="slmA"
/locus_tag="Sbal_0374"
/gene_synonym="ttk"
/note="division inhibitor protein; Provisional; Region:
slmA; PRK09480"
/db_xref="CDD:181894"
misc_feature complement(418051..418191)
/gene="slmA"
/locus_tag="Sbal_0374"
/gene_synonym="ttk"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene complement(418262..418720)
/gene="dut"
/locus_tag="Sbal_0375"
/db_xref="GeneID:4845046"
CDS complement(418262..418720)
/gene="dut"
/locus_tag="Sbal_0375"
/EC_number="3.6.1.23"
/note="catalyzes the formation of dUMP from dUTP"
/codon_start=1
/transl_table=11
/product="deoxyuridine 5'-triphosphate
nucleotidohydrolase"
/protein_id="YP_001048776.1"
/db_xref="GI:126172627"
/db_xref="InterPro:IPR008180"
/db_xref="InterPro:IPR008181"
/db_xref="GeneID:4845046"
/translation="MKTPIELKILDSRIGSEFPLPAYATPGSAGMDLRAMIDTTLTIA
PGETVLIPTGIAIHVADQGLAAVILPRSGLGHKHGIVLGNLVGLIDSDYQGPLMVSCW
NRSDSPFALEIGDRLAQLVFVPVVQAQFKLVDEFDSSDRGEGGFGHSGTK"
misc_feature complement(418355..418636)
/gene="dut"
/locus_tag="Sbal_0375"
/note="Trimeric dUTP diphosphatases; Region:
trimeric_dUTPase; cd07557"
/db_xref="CDD:143638"
misc_feature complement(order(418364..418366,418376..418378,
418385..418399,418409..418411,418415..418417,
418421..418423,418427..418429,418448..418450,
418457..418459,418475..418483,418499..418516,
418520..418522,418571..418573,418577..418582,
418595..418597,418631..418636))
/gene="dut"
/locus_tag="Sbal_0375"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:143638"
misc_feature complement(order(418427..418432,418442..418444,
418451..418459,418502..418510))
/gene="dut"
/locus_tag="Sbal_0375"
/note="active site"
/db_xref="CDD:143638"
gene complement(418717..419937)
/locus_tag="Sbal_0376"
/db_xref="GeneID:4845047"
CDS complement(418717..419937)
/locus_tag="Sbal_0376"
/EC_number="4.1.1.36"
/EC_number="6.3.2.5"
/note="KEGG: shn:Shewana3_3771 phosphopantothenoylcysteine
decarboxylase/phosphopantothenate--cysteine ligase;
TIGRFAM: phosphopantothenoylcysteine
decarboxylase/phosphopantothenate--cysteine ligase;
PFAM: flavoprotein; DNA/pantothenate metabolism
flavoprotein domain protein"
/codon_start=1
/transl_table=11
/product="phosphopantothenoylcysteine
decarboxylase/phosphopantothenate--cysteine ligase"
/protein_id="YP_001048777.1"
/db_xref="GI:126172628"
/db_xref="InterPro:IPR003382"
/db_xref="InterPro:IPR005252"
/db_xref="InterPro:IPR007085"
/db_xref="GeneID:4845047"
/translation="MMSVSLTNKNVLLGIGGGIAAYKSADLVRRLKERGFDVRVVMSQ
SAMEFITPLTLQALSGHPVASSLLDPAAEAAMGHIELARWADLVIIAPATANLLARIN
AGMADELITTTCLATEAPIALCPAMNQQMYRNLATQANLTSLASRGFTLWGPASGSQA
CGEVGPGRMLEPLEIAELASNFFATKEVSALPLAGQSLLITAGPTREAIDPVRYISNH
SSGKMGFALAKAAADMGATVTLVSGPVNLSTPEGVIRIDVESAQNMLDAVMDNVDKKD
IFIGCAAVADYRISDIATCKIKKSAEEMQLALVRNPDILATVASLPNRPFVVGFAAET
HDVEAYARDKLKRKNLNMIAANDVSVAGLGFNADANALRVFWPHGSQDLPATDKLTLA
RQLLSLIVKEKTNT"
misc_feature complement(418735..419931)
/locus_tag="Sbal_0376"
/note="bifunctional phosphopantothenoylcysteine
decarboxylase/phosphopantothenate synthase; Validated;
Region: PRK05579"
/db_xref="CDD:180143"
misc_feature complement(419527..419913)
/locus_tag="Sbal_0376"
/note="Flavoprotein; Region: Flavoprotein; pfam02441"
/db_xref="CDD:202241"
misc_feature complement(418813..419361)
/locus_tag="Sbal_0376"
/note="DNA / pantothenate metabolism flavoprotein; Region:
DFP; pfam04127"
/db_xref="CDD:202899"
gene 420060..420737
/gene="radC"
/locus_tag="Sbal_0377"
/db_xref="GeneID:4845596"
CDS 420060..420737
/gene="radC"
/locus_tag="Sbal_0377"
/note="Involved in DNA double-strand break repair and
recombination. Promotes the annealing of complementary
single-stranded DNA and by simulation of RAD51
recombinase"
/codon_start=1
/transl_table=11
/product="DNA repair protein RadC"
/protein_id="YP_001048778.1"
/db_xref="GI:126172629"
/db_xref="InterPro:IPR001405"
/db_xref="GeneID:4845596"
/translation="MGIKDWPEGEGPRDKLLQKGAGQLSDAELLAVLLRNGLAGLNAV
DLARSLISEFGGLRNLLCAPRNQVCRLPGVGPVKYAQLQAAAELARRVAQENLQRGQV
LTNPDLTRDYLMRQLADRSYEVFAVLLLDSQHRVIQFVELFRGTIDSASVYPREVVSL
VLEKKAAAVIVCHNHPSGIAEPSQADRRITERLKNALATIDVSLLDHMVVGDREIVSF
AERGWIN"
misc_feature 420060..420731
/gene="radC"
/locus_tag="Sbal_0377"
/note="hypothetical protein; Reviewed; Region: PRK00024"
/db_xref="CDD:178801"
misc_feature 420387..420716
/gene="radC"
/locus_tag="Sbal_0377"
/note="Mov34/MPN/PAD-1 family; Region: MPN_DUF2466;
cd08071"
/db_xref="CDD:163702"
misc_feature order(420426..420428,420576..420578,420582..420584,
420606..420608,420615..420617)
/gene="radC"
/locus_tag="Sbal_0377"
/note="MPN+ (JAMM) motif; other site"
/db_xref="CDD:163702"
misc_feature order(420576..420578,420582..420584,420615..420617)
/gene="radC"
/locus_tag="Sbal_0377"
/note="Zinc-binding site [ion binding]; other site"
/db_xref="CDD:163702"
gene 420859..421095
/gene="rpmB"
/locus_tag="Sbal_0378"
/db_xref="GeneID:4843127"
CDS 420859..421095
/gene="rpmB"
/locus_tag="Sbal_0378"
/note="required for 70S ribosome assembly"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L28"
/protein_id="YP_001048779.1"
/db_xref="GI:126172630"
/db_xref="InterPro:IPR001383"
/db_xref="GeneID:4843127"
/translation="MSRVCQVTGKKPMVGNNRSHAKNATRRRFLPNLQNHRFWLEEEK
RFVQLRVSTKGIRLIDKKGIEVVVAELRARGEKV"
misc_feature 420859..421086
/gene="rpmB"
/locus_tag="Sbal_0378"
/note="50S ribosomal protein L28; Reviewed; Region: rpmB;
PRK00359"
/db_xref="CDD:178987"
gene 421102..421275
/gene="rpmG"
/locus_tag="Sbal_0379"
/db_xref="GeneID:4843296"
CDS 421102..421275
/gene="rpmG"
/locus_tag="Sbal_0379"
/note="in Escherichia coli BM108, a mutation that results
in lack of L33 synthesis had no effect on ribosome
synthesis or function; there are paralogous genes in
several bacterial genomes, and a CXXC motif for zinc
binding and an upstream regulation region of the paralog
lacking this motif that are regulated by zinc similar to
other ribosomal proteins like L31; the proteins in this
group lack the CXXC motif"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L33"
/protein_id="YP_001048780.1"
/db_xref="GI:126172631"
/db_xref="InterPro:IPR001705"
/db_xref="GeneID:4843296"
/translation="MAKAKGNREKIKLVSTAKTGHFYTTEKNKRNMPEKMEIKKFDPV
IRQHVIYKEAKIK"
misc_feature 421108..421266
/gene="rpmG"
/locus_tag="Sbal_0379"
/note="50S ribosomal protein L33; Validated; Region: rpmG;
PRK00595"
/db_xref="CDD:179075"
gene 421599..422918
/locus_tag="Sbal_0380"
/db_xref="GeneID:4845054"
CDS 421599..422918
/locus_tag="Sbal_0380"
/EC_number="2.3.1.1"
/note="catalyzes the formation of N-acetyl-L-glutamate
from L-glutamate and acetyl-CoA in arginine biosynthesis"
/codon_start=1
/transl_table=11
/product="N-acetylglutamate synthase"
/protein_id="YP_001048781.1"
/db_xref="GI:126172632"
/db_xref="InterPro:IPR000182"
/db_xref="InterPro:IPR001048"
/db_xref="InterPro:IPR003006"
/db_xref="InterPro:IPR010167"
/db_xref="GeneID:4845054"
/translation="MRTTELVDGFRHSAPYVNAHRGKTFVVMLGGEALAQNHFRAILN
DVALLHSLGIKVVLVYGARPQIDAALAVNGIEPAYHEGVRITDEDSLKVIKQVAGALQ
FDITARLSMSLSNTPMQGAQINLVSGNFVIAQPLGVDNGIDFCLSGRVRRIDVQGLKR
QLDNHCIVLMGPIAASVTGESFNLTAEEIATQVAIKLKADKMIGFSSQNGILDRNGDV
IAELMPNDAQNIMSKLAEQGSACVGTMAFLKASIDACRNGVPRCHLVSYLEDGALLQE
LFSREGIGTQIVTESAERLRCASIADIGGVLNLIRPLEEQGILVRRSREQLEIEIEQF
MLIERDGLVIGCAALYPFEEDNAGEFACLVVHPDYRDADRGSLLLKNIINQARNRGYS
RLFALTTRSIHWFLEHGFVIEDVEALPQKKKQLYNYQRRSKILALDL"
misc_feature 421599..422915
/locus_tag="Sbal_0380"
/note="N-acetylglutamate synthase; Validated; Region:
PRK05279"
/db_xref="CDD:179989"
misc_feature 421611..422459
/locus_tag="Sbal_0380"
/note="AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like
domain of the NAG Synthase (NAGS) of the
arginine-biosynthesis pathway (ABP) found in gamma- and
beta-proteobacteria and higher plant chloroplasts. Domain
architecture of these NAGS consisted of an...; Region:
AAK_NAGS-ABP; cd04237"
/db_xref="CDD:58603"
misc_feature 421623..421652
/locus_tag="Sbal_0380"
/note="putative feedback inhibition sensing region; other
site"
/db_xref="CDD:58603"
misc_feature order(421680..421682,421686..421694,422217..422222,
422229..422234)
/locus_tag="Sbal_0380"
/note="putative nucleotide binding site [chemical
binding]; other site"
/db_xref="CDD:58603"
misc_feature order(421680..421682,421686..421691,421779..421787,
422151..422159)
/locus_tag="Sbal_0380"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:58603"
misc_feature 422598..422783
/locus_tag="Sbal_0380"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(422685..422693,422721..422726)
/locus_tag="Sbal_0380"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 423038..423577
/locus_tag="Sbal_0381"
/db_xref="GeneID:4845155"
CDS 423038..423577
/locus_tag="Sbal_0381"
/note="KEGG: son:SO4244 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048782.1"
/db_xref="GI:126172633"
/db_xref="GeneID:4845155"
/translation="MSPQYFELAPFTQTSIFSFIVLLLGLAGILLMLWLKNMPKIAKS
ASLGILLVMMGGFSWVFYQSNSAELVLTDTELTVDVPFYKVQLSRADLLPAEARIVDL
QQEADLTPSFKTNGIGMPGFQLGWFNLQGKGRAFLAITDKSQLVLVLVPTVKGYSLLL
TVPQGSEFLAQLQKSSSLL"
gene complement(423602..424486)
/locus_tag="Sbal_0382"
/db_xref="GeneID:4841367"
CDS complement(423602..424486)
/locus_tag="Sbal_0382"
/note="TIGRFAM: RarD protein, DMT superfamily transporter;
PFAM: protein of unknown function DUF6, transmembrane;
KEGG: son:SO4243 rarD protein"
/codon_start=1
/transl_table=11
/product="transporter DMT superfamily protein"
/protein_id="YP_001048783.1"
/db_xref="GI:126172634"
/db_xref="InterPro:IPR000620"
/db_xref="InterPro:IPR004626"
/db_xref="GeneID:4841367"
/translation="MQDLEYRKGILLAVSAYCMWGFAPLYFKLLNHVSATEILLHRVI
WSFVFMLIIMQFIGGFSRLRLLFKQPKQLMVLTITSILIAGNWLLFIWAVNNDHMLDA
SLGYFINPLLNVLLGMLFLGERLRKLQWFAVALASAGVLIQLISFGSIPIVSLALAGT
FGFYALLRKKVNVDAKAGLLVETAVLLPVALIYLVATLDTATASMLTNDWQLNLMLMA
AGIVTTIPLLCFAGAAVRIPLSMLGFFQYIGPSIMFILAVSLFNEPFDAEKGVTFGFI
WSALLVFTLDMAYKRKAA"
misc_feature complement(423611..424486)
/locus_tag="Sbal_0382"
/note="putative chloramphenical resistance permease RarD;
Provisional; Region: PRK15430"
/db_xref="CDD:185328"
gene complement(424688..425152)
/locus_tag="Sbal_0383"
/db_xref="GeneID:4845040"
CDS complement(424688..425152)
/locus_tag="Sbal_0383"
/note="TIGRFAM: uncharacterized domain 1;
PFAM: thioesterase superfamily protein;
KEGG: she:Shewmr4_3591 uncharacterized domain 1"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048784.1"
/db_xref="GI:126172635"
/db_xref="InterPro:IPR003736"
/db_xref="InterPro:IPR006683"
/db_xref="GeneID:4845040"
/translation="MTSPIQAEALRRVAAVFDQHVPFHNLLGLDIKRYDIDGVEVVIN
MKPELIGNIHQQILHGGVTATVLDVVGGLTAFAGLVASRDDWTVEELQQRLQTLGTID
MRVDYLRPGRGLTFTGTGSVIRAGNRVSVCRMELHNEQGTHIAFGTGTYMVG"
misc_feature complement(424694..425077)
/locus_tag="Sbal_0383"
/note="PaaI_thioesterase is a tetrameric acyl-CoA
thioesterase with a hot dog fold and one of several
proteins responsible for phenylacetic acid (PA)
degradation in bacteria. Although orthologs of PaaI exist
in archaea and eukaryotes, their function has not...;
Region: PaaI_thioesterase; cd03443"
/db_xref="CDD:48038"
misc_feature complement(order(424823..424834,424853..424855,
424979..424981))
/locus_tag="Sbal_0383"
/note="CoenzymeA binding site [chemical binding]; other
site"
/db_xref="CDD:48038"
misc_feature complement(order(424832..424834,424838..424852,
424961..424963,424970..424972,424976..424978))
/locus_tag="Sbal_0383"
/note="subunit interaction site [polypeptide binding];
other site"
/db_xref="CDD:48038"
misc_feature complement(order(424853..424855,424934..424939,
424946..424951,424973..424975))
/locus_tag="Sbal_0383"
/note="PHB binding site; other site"
/db_xref="CDD:48038"
gene 425592..427415
/locus_tag="Sbal_0384"
/db_xref="GeneID:4845041"
CDS 425592..427415
/locus_tag="Sbal_0384"
/note="KEGG: shn:Shewana3_3763 ATP-dependent DNA helicase
RecQ;
TIGRFAM: ATP-dependent DNA helicase, RecQ family;
ATP-dependent DNA helicase RecQ;
PFAM: helicase domain protein; HRDC domain protein;
DEAD/DEAH box helicase domain protein;
SMART: DEAD-like helicases-like"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase RecQ"
/protein_id="YP_001048785.1"
/db_xref="GI:126172636"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR002121"
/db_xref="InterPro:IPR004589"
/db_xref="InterPro:IPR006293"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:4845041"
/translation="MEKFVLDTHDDPLSQRLAQVFGYRDFRDGQREVIERVCGGQDCL
VIMPTGGGKSLCYQLPALLMDGITIVVSPLISLMKDQVDSLLQTGVAAAYLNSSLPRE
QSAEVLRQLRHGELKLLYVSPERLLSADFIERMQSLQLAMFAIDEAHCISQWGHDFRP
EYAALGQLKQLFPYVPMMALTATADQATRQSICERLGIDPFRLLSSFDRPNIRYTVAE
KLNAANQLRHFLTQQNGTNGIIYCSSRRRVDEVADRLCLQGFNAKAYHAGMTQEDRGA
VQDSFLKDQIDIVVATVAFGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAE
AFMLFDPADIGRVRHLIEQSEPGPQQQVEFHKLNTMAAFAEAQTCRRQVLLHYFDESA
LEPCGNCDICLDPPKRYNGTEDAQKVLSCIFRLGQRFGINHLIEVLRGSKGAPIVDRG
HDKLTTWGIGKDKSHEYWLSVIRQLIHLGLASQDVTRGSSITLNPSARPVLKGEVALM
LAEPRIQLTTTKRKVSQSKAPLNYDRKLFARLKLLRRTIAEQQDVPPYLVFNDATLAE
MAAMMPTSAGEMLAVNGVGERKLSRFGDAFLDEIAAYLAGE"
misc_feature 425634..427412
/locus_tag="Sbal_0384"
/note="ATP-dependent DNA helicase RecQ; Provisional;
Region: PRK11057"
/db_xref="CDD:182933"
misc_feature 425712..426140
/locus_tag="Sbal_0384"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 425739..425753
/locus_tag="Sbal_0384"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 426027..426038
/locus_tag="Sbal_0384"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature 426285..426605
/locus_tag="Sbal_0384"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(426318..426329,426387..426392,426465..426473)
/locus_tag="Sbal_0384"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(426489..426491,426552..426554,426564..426566,
426573..426575)
/locus_tag="Sbal_0384"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
misc_feature 426819..427094
/locus_tag="Sbal_0384"
/note="This DNA-binding domain is found in the RecQ
helicase among others and has a helix-turn-helix
structure; Region: RQC; smart00956"
/db_xref="CDD:198024"
misc_feature <427230..427391
/locus_tag="Sbal_0384"
/note="HRDC domain; Region: HRDC; pfam00570"
/db_xref="CDD:201312"
gene complement(427397..429178)
/locus_tag="Sbal_0385"
/db_xref="GeneID:4842054"
CDS complement(427397..429178)
/locus_tag="Sbal_0385"
/note="SMART: Tetratricopeptide domain protein;
KEGG: she:Shewmr4_3589 response regulator receiver
protein"
/codon_start=1
/transl_table=11
/product="response regulator receiver protein"
/protein_id="YP_001048786.1"
/db_xref="GI:126172637"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR013026"
/db_xref="GeneID:4842054"
/translation="MDFRVLVLSLLLWLIPFGASAIDQLDELTELVYQYPSKALTQIT
ALEKQFTTRATSDINRLRLSVLKCQNLLQLGENEAAINVAQLGEANAKQLKLDQVRPY
FLICQADANLNYNNIQNALPLLDSAITLARRYQQPQALVDALRLRGQLDTDTDNFSSA
IEDLRLAIDIYPDIHTQTQNWVWPPQAYIYAAMGYLLYATHDFPQAMYYTNLGIQSSD
AKGKVLHIILRNAARIALDNQEFDYSDKLEKQAKALLPELGSPLELAYSYAILASIAL
DKGRIDTAEEYLSIAINTFKKHNQQLAMMRSTRLLAQIRFAQHQDDAALILMNHAIEQ
AENLKQYSDLKGFYGIMSDHYLEQGDFKQAYSFLLKRYRAAELANQGMNTARILQFKA
RLNQQDLQQDQNSTAPEKASILQELNLDWAYSTLFLIAMTLLGGAIWYLIDKQNNRAP
RIEGEEPAETLLQQVTSALNIAKQGNYPLSLLLFNASQIRQVDLPPLQDELQHRLREQ
DKLIRYSMDEIVIILPHTSAAGAKKVVNQLVACIQPWQGSSKVNIGIAAMQQFDTLES
LIKRASINQLGKVKISENNPNHYSPAK"
misc_feature complement(427466..>427678)
/locus_tag="Sbal_0385"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(427568..427570,427652..427654))
/locus_tag="Sbal_0385"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature complement(order(427625..427636,427640..427642))
/locus_tag="Sbal_0385"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(427628..427630)
/locus_tag="Sbal_0385"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
gene 429686..431254
/locus_tag="Sbal_0386"
/db_xref="GeneID:4845678"
CDS 429686..431254
/locus_tag="Sbal_0386"
/EC_number="2.3.3.13"
/note="catalyzes the formation of 2-isopropylmalate from
acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis"
/codon_start=1
/transl_table=11
/product="2-isopropylmalate synthase"
/protein_id="YP_001048787.1"
/db_xref="GI:126172638"
/db_xref="InterPro:IPR000891"
/db_xref="InterPro:IPR002034"
/db_xref="InterPro:IPR005671"
/db_xref="InterPro:IPR013709"
/db_xref="GeneID:4845678"
/translation="MSNRVIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVME
VGFPVSSPGDFESVQTIARTIKNSRVCALSRALEKDIDAAAQALSVADQFRIHTFIST
STIHVESKLKRSFDQVLEMAVSAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIL
AGARTINIPDTVGYTVPSEFGTIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAV
QHGARQIECTINGIGERAGNCSLEEIAMILATRKGMLGLETGINAKEIHRTSNLVSQL
CNMPVQANKAIVGANAFTHSSGIHQDGMLKAQNTYEIMTPESIGLNRNNLNMTSRSGR
HVIKHRMEEMGYSEHDYNMDALYEEFLKLADKKGQVFDYDLEALAFMEAQAEEDNHYQ
LQQLVVQSDSTEGVATATVRIEVGGEIKTEAATGNGPVDAAYNAIARATDRRIDIISY
KLGAKGVGQNALGQVDITAVYHEQNFHGVGLATDVVEASARALVHVMNLTCRADKVAD
YKQSMQKNRELGGV"
misc_feature 429686..431224
/locus_tag="Sbal_0386"
/note="2-isopropylmalate synthase; Validated; Region:
PRK00915"
/db_xref="CDD:179166"
misc_feature 429704..430510
/locus_tag="Sbal_0386"
/note="2-isopropylmalate synthase (IPMS), N-terminal
catalytic TIM barrel domain; Region: DRE_TIM_IPMS;
cd07940"
/db_xref="CDD:163678"
misc_feature order(429722..429727,429734..429736,429815..429817,
429908..429910,429974..429976,430100..430102,
430106..430108,430190..430192,430196..430198,
430289..430291,430295..430297)
/locus_tag="Sbal_0386"
/note="active site"
/db_xref="CDD:163678"
misc_feature order(429722..429727,429815..429817)
/locus_tag="Sbal_0386"
/note="catalytic residues [active]"
/db_xref="CDD:163678"
misc_feature order(430289..430291,430295..430297)
/locus_tag="Sbal_0386"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163678"
misc_feature 430790..431179
/locus_tag="Sbal_0386"
/note="LeuA allosteric (dimerisation) domain; Region:
LeuA_dimer; pfam08502"
/db_xref="CDD:203962"
gene 431325..432419
/locus_tag="Sbal_0387"
/db_xref="GeneID:4842049"
CDS 431325..432419
/locus_tag="Sbal_0387"
/EC_number="1.1.1.85"
/note="catalyzes the oxidation of 3-isopropylmalate to
3-carboxy-4-methyl-2-oxopentanoate in leucine
biosynthesis"
/codon_start=1
/transl_table=11
/product="3-isopropylmalate dehydrogenase"
/protein_id="YP_001048788.1"
/db_xref="GI:126172639"
/db_xref="InterPro:IPR001804"
/db_xref="InterPro:IPR004429"
/db_xref="GeneID:4842049"
/translation="MSYQVAVLAGDGIGPEVMAEARKVLREVEARFDLNIEYTQYDVG
GIAIDNHGCPLPDATLKGCEAADAILFGSVGGPKWEKLPPNEQPERGALLPLRGHFEL
FCNLRPAKLHDGLEHMSPLRSDISARGFDVLCVRELTGGIYFGKPKGRQGEGENEEAF
DTMRYSRREISRIARIAFEAARGRRKKVTSVDKANVLACSVLWRQVVEEVAVDFPDVE
LEHIYIDNATMQLLRRPDEFDVMLCSNLFGDILSDEIAMLTGSMGLLSSASMNSSGFG
LFEPAGGSAPDIAGKGVANPVAQILSAALMLRHSLKQEEAASAIERAVSKALNSGYLT
GELLSSDKRSEAKSTAEMGDFIANAIKEGV"
misc_feature 431325..432413
/locus_tag="Sbal_0387"
/note="3-isopropylmalate dehydrogenase; Provisional;
Region: PRK00772"
/db_xref="CDD:179119"
misc_feature 431337..432410
/locus_tag="Sbal_0387"
/note="tartrate dehydrogenase; Provisional; Region:
PRK08194"
/db_xref="CDD:181281"
gene 432419..433825
/locus_tag="Sbal_0388"
/db_xref="GeneID:4844388"
CDS 432419..433825
/locus_tag="Sbal_0388"
/EC_number="4.2.1.33"
/note="dehydratase component, catalyzes the isomerization
between 2-isopropylmalate and 3-isopropylmalate"
/codon_start=1
/transl_table=11
/product="isopropylmalate isomerase large subunit"
/protein_id="YP_001048789.1"
/db_xref="GI:126172640"
/db_xref="InterPro:IPR001030"
/db_xref="InterPro:IPR004430"
/db_xref="GeneID:4844388"
/translation="MTNAKTLYQKVWDAHIVASPEGEAPVIYVDRHLVHEVTSPQAFS
GLKVAGRKLRAPEKTFATMDHNTSTRSASLDALSPMARTQVETLAQNCKDFGVRLYDI
HHPNQGIVHVMGPELGITLPGTVIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTL
RQLKAKTMKIEVRGHVTDGVTAKDIVLAIIGKIGMDGGTGYVVEFCGEAIEALSMEGR
MTVCNMAIEMGAKAGMVAPDQTTFDYLAGREFAPKDEDWAEAVAYWKAIKTDDGAVFD
AVVELDAADIAPQLTWGTNPGQVVAIDGKVPDPLNEANPSTRASMEKALEYIGLSAGT
QMTDISINKVFIGSCTNSRIEDLRSAAVHAKGRKVASGVTAIVVPGSGQVKAQAEAEG
LDKIFIEAGFEWRLPGCSMCLAMNDDRLEAGDRCASTSNRNFEGRQGRGSRTHLVSPA
MAAAAAVAGHFVDIRKPY"
misc_feature 432428..433816
/locus_tag="Sbal_0388"
/note="3-isopropylmalate dehydratase large subunit;
Reviewed; Region: PRK00402"
/db_xref="CDD:179006"
misc_feature 432509..433801
/locus_tag="Sbal_0388"
/note="3-isopropylmalate dehydratase catalyzes the
isomerization between 2-isopropylmalate and
3-isopropylmalate; Region: IPMI; cd01583"
/db_xref="CDD:153133"
misc_feature order(432521..432523,432530..432532,432806..432811,
433655..433657,433712..433714,433727..433729)
/locus_tag="Sbal_0388"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:153133"
misc_feature order(432812..432814,433463..433465,433643..433645,
433652..433657,433709..433711)
/locus_tag="Sbal_0388"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:153133"
gene 433853..434458
/gene="leuD"
/locus_tag="Sbal_0389"
/db_xref="GeneID:4842174"
CDS 433853..434458
/gene="leuD"
/locus_tag="Sbal_0389"
/note="catalyzes the isomerization between
2-isopropylmalate and 3-isopropylmalate in leucine
biosynthesis; forms a heterodimer of LeuC/D"
/codon_start=1
/transl_table=11
/product="isopropylmalate isomerase small subunit"
/protein_id="YP_001048790.1"
/db_xref="GI:126172641"
/db_xref="InterPro:IPR000573"
/db_xref="InterPro:IPR004431"
/db_xref="GeneID:4842174"
/translation="MQPFTTHTGLAVMIDSTNIDTDQIIPKQFLSKVTRDGFGVHLFH
DWRYLDDAGDQPNPEFSLNQSRYRGASILLAQENFGCGSSREHAPWALADFGLRAIIA
QSFADIFYGNSINNGLLPVALTHAQVRQLMDEVAAEAGAQITVDLTSCKVVSPSGAEF
SFTLAESARHKLLNGLDAIGLTLSHAAQIGQYETQIQGWRR"
misc_feature 433904..434293
/gene="leuD"
/locus_tag="Sbal_0389"
/note="Aconatase-like swivel domain of 3-isopropylmalate
dehydratase and related uncharacterized proteins.
3-isopropylmalate dehydratase catalyzes the isomerization
between 2-isopropylmalate and 3-isopropylmalate, via the
formation of 2-isopropylmaleate...; Region: IPMI_Swivel;
cd01577"
/db_xref="CDD:73275"
misc_feature 434099..434107
/gene="leuD"
/locus_tag="Sbal_0389"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73275"
gene 434992..436341
/locus_tag="Sbal_0390"
/db_xref="GeneID:4841409"
CDS 434992..436341
/locus_tag="Sbal_0390"
/note="PFAM: membrane protein involved in aromatic
hydrocarbon degradation;
KEGG: shn:Shewana3_3757 membrane protein involved in
aromatic hydrocarbon degradation"
/codon_start=1
/transl_table=11
/product="aromatic hydrocarbon degradation membrane
protein"
/protein_id="YP_001048791.1"
/db_xref="GI:126172642"
/db_xref="InterPro:IPR005017"
/db_xref="GeneID:4841409"
/translation="MQKRLLTLAVTAALLSSTTQLHAAGFQLAEYSATGLGRAFAGEA
AMADNASAQARNPAMLTYLEGRQLSTGGIYVMPNVDVTGDVSISSPLLGPDPVVMKGG
DALDVADDALVPNFYYSNQLNDQWTWGLAVNSNYGLATELPATHAAAIFGNKTSVTTV
EFNPNIAYRINDAVSVGAGVRIVYGEGEIGASLPGWVDGIKPALPAPVQAVLPPGGTE
LKSMKGDDVGYGWQLGASWQINPAHRLGFAYHSGVQLDLDGHASGVLYTGGQDVSIEG
YLPLELPAFAEIASHHQLTDNWAMHASVNWTDWSVFDQLVAYFPGDVKPKGDLESDLV
KEEHFEDNWRFALGTTYQVNNDWLVRAGVALDKTAANDEWRTTTIPDSDRLWFSVGAG
YQATKNLNVDFAVTYIKATGDAPINEQQNLLGLAAVNFNGEASGDVWLAGIQMSYKM"
misc_feature 435064..436335
/locus_tag="Sbal_0390"
/note="Outer membrane protein transport protein
(OMPP1/FadL/TodX); Region: Toluene_X; pfam03349"
/db_xref="CDD:202603"
gene 436535..438019
/locus_tag="Sbal_0391"
/db_xref="GeneID:4844546"
CDS 436535..438019
/locus_tag="Sbal_0391"
/note="TIGRFAM: glycerol kinase;
PFAM: carbohydrate kinase, FGGY;
KEGG: shn:Shewana3_3756 glycerol kinase"
/codon_start=1
/transl_table=11
/product="glycerol kinase"
/protein_id="YP_001048792.1"
/db_xref="GI:126172643"
/db_xref="InterPro:IPR000577"
/db_xref="InterPro:IPR005999"
/db_xref="GeneID:4844546"
/translation="MQKKYVVALDQGTTSSRAIVFDHDANIVSVSQREFTQLYPNPGW
VEHDPMEIWASQSSVLVEVLARAGIHSDEVAAIGITNQRETTVIWEKATGKPIYNAIV
WQCRRSSEICEQLKAQGLEEYVRENTGLLLDPYFSGTKIKWILDNVPNARAQAERGEL
LFGTIDTWLVWKLTEGKVHVTDPTNAARTLLFNIHSLTWDNKLLEALDIPLSLLPEVK
PSCSVYGTTRIAGEGSEIQVAGMAGDQQAALFGQLCVEPGMAKNTYGTGCFLLMNTGT
KAVRSNHGLLTTVAVGPKGEVNYALEGSVFMGGATIQWLRDELGLIRDASDTEYFASK
VADTNGVYLVPAFVGLGAPYWDPNARGALFGLTRGANRNHIIRAALESIAYQSKDLLD
AMTKDSGVSLKRLKVDGGAVANDFLMQFQADITDVEVLRPSVCETTALGAAFLAGLAV
GFWESVIELEHKACIDKHFIPNIDAETRVRLYAGWQDAVARTRA"
misc_feature 436535..438016
/locus_tag="Sbal_0391"
/note="glycerol kinase; Provisional; Region: glpK;
PRK00047"
/db_xref="CDD:178821"
misc_feature 436547..438004
/locus_tag="Sbal_0391"
/note="Escherichia coli glycerol kinase-like proteins;
belongs to the FGGY family of carbohydrate kinases;
Region: FGGY_EcGK_like; cd07786"
/db_xref="CDD:198361"
misc_feature order(436547..436552,436556..436558,436562..436564,
436571..436576,436583..436585,436589..436591,
436595..436600,436607..436609,436613..436615,
436661..436663,436757..436783,436841..436846,
436850..436852,436859..436861,436871..436873,
436907..436909,436916..436927,436931..436933,
436937..436942,437081..437086,437093..437098,
437114..437119,437123..437125,437189..437200,
437249..437254,437270..437275,437330..437332,
437339..437341,437366..437368,437372..437374,
437390..437410,437423..437425,437429..437431,
437438..437440,437444..437446,437450..437455,
437471..437473,437576..437578,437597..437599,
437603..437608,437612..437614,437840..437842,
437846..437854,437858..437863,437867..437884,
437888..437893)
/locus_tag="Sbal_0391"
/note="N- and C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:198361"
misc_feature order(436562..436564,436568..436576,436583..436585,
436778..436786,436841..436843,436937..436939,
437264..437269,437324..437332,437339..437341,
437459..437464,437468..437473,437507..437512,
437516..437518,437759..437767,437774..437776)
/locus_tag="Sbal_0391"
/note="active site"
/db_xref="CDD:198361"
misc_feature order(436562..436564,436568..436576,436583..436585,
437324..437332,437459..437464,437468..437473,
437507..437512,437516..437518,437759..437767,
437774..437776)
/locus_tag="Sbal_0391"
/note="MgATP binding site [chemical binding]; other site"
/db_xref="CDD:198361"
misc_feature order(436562..436564,436571..436573,437264..437266)
/locus_tag="Sbal_0391"
/note="catalytic site [active]"
/db_xref="CDD:198361"
misc_feature order(436562..436564,437264..437266)
/locus_tag="Sbal_0391"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:198361"
misc_feature order(436571..436573,436778..436786,436841..436843,
436937..436939,437264..437269,437339..437341)
/locus_tag="Sbal_0391"
/note="glycerol binding site [chemical binding]; other
site"
/db_xref="CDD:198361"
misc_feature order(436631..436633,436682..436684,436691..436696,
436706..436708,436715..436720,436817..436819,
437048..437050,437057..437059,437216..437221)
/locus_tag="Sbal_0391"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:198361"
misc_feature order(436649..436651,436658..436660,436667..436669,
436844..436846,437453..437455,437462..437464,
437471..437476,437483..437485,437552..437554,
437558..437560,437573..437575,437612..437638,
437648..437650,437657..437659)
/locus_tag="Sbal_0391"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:198361"
misc_feature order(437228..437233,437237..437239)
/locus_tag="Sbal_0391"
/note="FBP binding site [chemical binding]; other site"
/db_xref="CDD:198361"
misc_feature order(437735..437737,437741..437743,437945..437947,
437951..437953,437957..437968,437972..437974)
/locus_tag="Sbal_0391"
/note="protein IIAGlc interface [polypeptide binding];
other site"
/db_xref="CDD:198361"
gene complement(438191..438520)
/locus_tag="Sbal_0392"
/db_xref="GeneID:4844547"
CDS complement(438191..438520)
/locus_tag="Sbal_0392"
/note="KEGG: shm:Shewmr7_0374 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048793.1"
/db_xref="GI:126172644"
/db_xref="GeneID:4844547"
/translation="MSGLDSIYAMLAQPVKAVLHPKRVVDKVSSATANAPDSHETPQS
QLPPTLEGRDAKVRERRKDADNNKNKKRRASDEPEELKEGVVLEVTDDTAEIKKPPSQ
HIIDVEV"
gene 439258..439716
/locus_tag="Sbal_0393"
/db_xref="GeneID:4843232"
CDS 439258..439716
/locus_tag="Sbal_0393"
/note="MraZ; UPF0040; crystal structure shows similarity
to AbrB"
/codon_start=1
/transl_table=11
/product="cell division protein MraZ"
/protein_id="YP_001048794.1"
/db_xref="GI:126172645"
/db_xref="InterPro:IPR003444"
/db_xref="GeneID:4843232"
/translation="MFRGASAINLDTKGRIAIPVRYREPLQLEHQGRIVITVDIQSAC
LLLYPIHEWELIEAKLLKLSDTDKTQRSLKRLLLGYAHEVELDGNGRILLPPPLRQYA
NLDKRIMLVGQLNKFELWDEQSWLQQIDECLETIRSEELASNERLADFSL"
misc_feature 439258..439674
/locus_tag="Sbal_0393"
/note="cell division protein MraZ; Reviewed; Region:
PRK00326"
/db_xref="CDD:178978"
misc_feature 439258..439485
/locus_tag="Sbal_0393"
/note="MraZ protein; Region: MraZ; pfam02381"
/db_xref="CDD:111290"
misc_feature 439486..>439659
/locus_tag="Sbal_0393"
/note="MraZ protein; Region: MraZ; pfam02381"
/db_xref="CDD:111290"
gene 439748..440689
/gene="mraW"
/locus_tag="Sbal_0394"
/db_xref="GeneID:4842176"
CDS 439748..440689
/gene="mraW"
/locus_tag="Sbal_0394"
/note="TIGRFAM: S-adenosyl-methyltransferase MraW;
PFAM: methyltransferase;
KEGG: she:Shewmr4_3578 S-adenosyl-methyltransferase MraW"
/codon_start=1
/transl_table=11
/product="S-adenosyl-methyltransferase MraW"
/protein_id="YP_001048795.1"
/db_xref="GI:126172646"
/db_xref="InterPro:IPR002903"
/db_xref="GeneID:4842176"
/translation="MSQEFAHLSVLLAETVGGLNIKDDGIYIDGTFGRGGHSRQVLQQ
LGENGRLIAIDRDPQAIEAAKQFADDPRFQIVHGGFGQLADYVEELGLVGKIDGVLLD
LGVSSPQLDDAERGFSFMRDGPLDMRMDNSQGQTAAQWLARAEIEDMAWVFKTYGEEK
NARHIARCIAADRDKTPFLRTKDLADLIARITKSKERNKHPATRVFQAIRIYINSELD
QIDQALEGAVNVLAPQGRLSVISFHSLEDRIVKRFIRRHSQGESVPHGFPVTEDQINK
SRKLRAVGKAIMPSDEEIERNARARSSVLRIAERLDY"
misc_feature 439748..440683
/gene="mraW"
/locus_tag="Sbal_0394"
/note="Predicted S-adenosylmethionine-dependent
methyltransferase involved in cell envelope biogenesis
[Cell envelope biogenesis, outer membrane]; Region:
COG0275"
/db_xref="CDD:30623"
misc_feature 439760..440683
/gene="mraW"
/locus_tag="Sbal_0394"
/note="16S rRNA m(4)C1402 methyltranserfase; Provisional;
Region: PRK00050"
/db_xref="CDD:178824"
gene 440700..441014
/locus_tag="Sbal_0395"
/db_xref="GeneID:4844567"
CDS 440700..441014
/locus_tag="Sbal_0395"
/note="PFAM: cell division protein FtsL;
KEGG: she:Shewmr4_3577 cell division protein FtsL"
/codon_start=1
/transl_table=11
/product="cell division protein FtsL"
/protein_id="YP_001048796.1"
/db_xref="GI:126172647"
/db_xref="InterPro:IPR007082"
/db_xref="InterPro:IPR011922"
/db_xref="GeneID:4844567"
/translation="MSKPSINLPRIVLHDLWLHKWILLLALLVLCNAVAVVYGSHISR
QLTTQWDQLLQERDRLDIEWRNLLLEEQSQTEHSRITRIASKELNMSRPLPSEEVVVK
VP"
misc_feature <440790..441005
/locus_tag="Sbal_0395"
/note="Cell division protein FtsL; Region: FtsL;
pfam04999"
/db_xref="CDD:147267"
gene 441028..442782
/locus_tag="Sbal_0396"
/db_xref="GeneID:4843933"
CDS 441028..442782
/locus_tag="Sbal_0396"
/EC_number="2.4.1.129"
/note="PFAM: penicillin-binding protein, transpeptidase;
Penicillin-binding protein, dimerisation domain;
KEGG: shn:Shewana3_3749 succinate dehydrogenase
(ubiquinone)"
/codon_start=1
/transl_table=11
/product="peptidoglycan glycosyltransferase"
/protein_id="YP_001048797.1"
/db_xref="GI:126172648"
/db_xref="InterPro:IPR001460"
/db_xref="InterPro:IPR005311"
/db_xref="GeneID:4843933"
/translation="MTRQAKIKRVSKPQKPQLIHWRLYVVVGFVCTLFCSLVGRAAYI
QIIEPDKLRHESDMRTLRTTSREVQRGLITDRNGDMLAVSVPVRAVWADPKQVNDNNG
FADMRRWQALADVLHEPVEDILDRVRSNPTKRFTYLKRQITPAVADYITQLKLPGVFL
KSESRRYYPGGEITAQLIGITNIDDVGIEGVENAYNSWLTGTPSKQKVRKSRDGHVVE
RLDIIQEGESPNDLVLSIDQRIQQLAYRELKRTTEMNQATSGSIVVLDIHTGEVLAMV
NTPSYNPNARDNLQTFRMRNRAMTDTFEPGSTIKPFVVAAALEAGTVKSTDIIATSPG
WMRLGGRQVRDPANYGDMSLARILAKSSNVGISKLALSIPVQQLLGTYQSMGLGSFSG
INLTGESAGVIQDRHRWSDFERATLSFGYGLTATTLQLARMYATLGNGGTLFPVSIMK
LKKPPVGERVISEDVAHDVMQMLVGVTEKGGTGTLAHIDGYPVAGKSGTSRKAVAGGY
GDDYVALFAGVAPANNPKLAIVVVVNEPKGDLYYGGSVAGPAFAKVMSGALQMLNVEP
ITDKEQVQLAGIAAGRAE"
misc_feature 441031..442725
/locus_tag="Sbal_0396"
/note="peptidoglycan synthase FtsI; Provisional; Region:
PRK15105"
/db_xref="CDD:185060"
misc_feature 441232..441690
/locus_tag="Sbal_0396"
/note="Penicillin-binding Protein dimerisation domain;
Region: PBP_dimer; pfam03717"
/db_xref="CDD:202738"
misc_feature 441805..442692
/locus_tag="Sbal_0396"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; pfam00905"
/db_xref="CDD:144486"
gene 442779..444278
/gene="murE"
/locus_tag="Sbal_0397"
/db_xref="GeneID:4844666"
CDS 442779..444278
/gene="murE"
/locus_tag="Sbal_0397"
/note="involved in cell wall formation; peptidoglycan
synthesis; cytoplasmic enzyme; catalyzes the addition of
meso-diaminopimelic acid to the nucleotide precursor
UDP-N-aceylmuramoyl-l-alanyl-d-glutamate"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
6-diaminopimelate ligase"
/protein_id="YP_001048798.1"
/db_xref="GI:126172649"
/db_xref="InterPro:IPR000713"
/db_xref="InterPro:IPR001645"
/db_xref="InterPro:IPR004101"
/db_xref="InterPro:IPR005761"
/db_xref="InterPro:IPR013221"
/db_xref="GeneID:4844666"
/translation="MMLLRDLLAPWLHYAGAQSFNDLTLDSRAIRRGDVFLALPGHKV
DGRQFIEKVLDLGAAAVLVHTDDADQHGKVLHSDNAEHGVQIYFFQLSRQVSAIAAQR
YPLAHQSATTSLGVIGITGTNGKTSTSQLIAQLITSLGRKAAVMGTLGNGLWGELVDS
GNTTADAITLMRQLHDFEAQGASVCAMEVSSHGLVQGRVDAVSFDVAVFTNLTRDHLD
YHGDMESYAAAKQSLFRFSTLGHGLLNLDDAVGASWLTELKSVPAQMWGFSIEGHQAA
AFYTKNAKFDDQGVSATLVWPEGETEIHSPLLGAFNLSNLLAALSALYLQGFDMKALA
EQVQYLTPVAGRMERFTTANNITLVVDYAHTPDAIEQALNALRRHCAGDLWCVFGCGG
DRDKGKRPLMGKAAEQYADRIMVTSDNARSEDPAQIITDIIQGLTHPQQALTQVDRIA
AIKEVVALAKPGDVILLAGKGHETYQEAAGVRHDYDERALARQLSEQSR"
misc_feature 442779..444269
/gene="murE"
/locus_tag="Sbal_0397"
/note="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
6-diaminopimelate ligase; Provisional; Region: murE;
PRK00139"
/db_xref="CDD:178894"
misc_feature 442845..443087
/gene="murE"
/locus_tag="Sbal_0397"
/note="Mur ligase family, catalytic domain; Region:
Mur_ligase; pfam01225"
/db_xref="CDD:201670"
misc_feature 443136..443696
/gene="murE"
/locus_tag="Sbal_0397"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature 443805..444065
/gene="murE"
/locus_tag="Sbal_0397"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 444275..445657
/locus_tag="Sbal_0398"
/db_xref="GeneID:4845808"
CDS 444275..445657
/locus_tag="Sbal_0398"
/note="TIGRFAM:
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
6-diaminopimelate--D-alanyl-D-alanyl ligase;
PFAM: cytoplasmic peptidoglycan synthetase domain protein;
cytoplasmic peptidoglycan synthetases domain protein; Mur
ligase, middle domain protein;
KEGG: son:SO4223
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
6-diaminopimelate--D-alanyl- D-alanine ligase"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
6-diaminopimelate--D-alanyl-D-alanyl ligase"
/protein_id="YP_001048799.1"
/db_xref="GI:126172650"
/db_xref="InterPro:IPR000713"
/db_xref="InterPro:IPR004101"
/db_xref="InterPro:IPR005863"
/db_xref="InterPro:IPR013221"
/db_xref="GeneID:4845808"
/translation="MIPLSLETLSQHLGMFRVGDDVTIEDLSSDSRKIGAATLFVALK
GERFDGHDFAATAIENGAAALMVERELAFDIPQLIVPDCQKAMGAIGAYVRDQINPIC
VALTGSNGKTSVKEMIATILSAKHQILYTAGNFNNEIGVPLTLLRLTPADEFGIFELG
ANHKGEIDYTSGLVRPNVALVNNVGSAHLEGFGSQAGVAQAKSEIFNHLQADGTAIIN
ADDAFADFMSVKARPYKQLSFSQQDGAAKRHIDVIATGHKTNADGCYRFMLNYSGESC
QVVLPLAGRHQVSNALAAASVCIALGLNLTEIAEGLSQLTPVKGRMQPSQLGRVRLID
DSYNANPVSVGAAIAWLKEISENRCLVLGDLGELGDNAPLLHAELGQLAKQQGIDALF
CTGTLSQHTSQAFGAEHYDSVATLVEKLIKHINQLPGQVTVLVKGSRSAAMERVVDGL
TVAFGRGELV"
misc_feature 444275..445624
/locus_tag="Sbal_0398"
/note="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
ligase; Reviewed; Region: murF; PRK10773"
/db_xref="CDD:182718"
misc_feature 444341..444559
/locus_tag="Sbal_0398"
/note="Mur ligase family, catalytic domain; Region:
Mur_ligase; pfam01225"
/db_xref="CDD:201670"
misc_feature 444590..445138
/locus_tag="Sbal_0398"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature 445226..445453
/locus_tag="Sbal_0398"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 445658..446740
/gene="mraY"
/locus_tag="Sbal_0399"
/db_xref="GeneID:4843063"
CDS 445658..446740
/gene="mraY"
/locus_tag="Sbal_0399"
/EC_number="2.7.8.13"
/note="First step of the lipid cycle reactions in the
biosynthesis of the cell wall peptidoglycan"
/codon_start=1
/transl_table=11
/product="phospho-N-acetylmuramoyl-pentapeptide-
transferase"
/protein_id="YP_001048800.1"
/db_xref="GI:126172651"
/db_xref="InterPro:IPR000715"
/db_xref="InterPro:IPR003524"
/db_xref="GeneID:4843063"
/translation="MLVYLAEYLTRFHTGFNVFSYVTFRAILGLLTALVFSLWFGPKL
IERLQLLQIGQVVRNDGPESHFSKRGTPTMGGLLILAAIFISVLLWGDLGSRYVWVML
FVLGSFGLIGFIDDYRKVVRKDTKGLIARWKYILQSLAALLIAFFLYATAANPGETQL
VVPFFKDVMPQLGAVFIVLAYFTIVGSSNAVNLTDGLDGLAIMPTVMVAAAFALIAYL
SGHAQFANYLHIPHLPGSGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLSLGAA
LGTIAVLVRQEILLVIMGGVFVMETLSVILQVGSYKLRGQRIFRMAPIHHHYELKGWP
EPRVIVRFWIISIFLVLLGLATLKLR"
misc_feature 445703..446737
/gene="mraY"
/locus_tag="Sbal_0399"
/note="phospho-N-acetylmuramoyl-pentapeptide-transferase;
Provisional; Region: mraY; PRK00108"
/db_xref="CDD:178869"
misc_feature 445838..446725
/gene="mraY"
/locus_tag="Sbal_0399"
/note="Phospho-N-acetylmuramoyl-pentapeptide-transferase
(mraY) is an enzyme responsible for the formation of the
first lipid intermediate in the synthesis of bacterial
cell wall peptidoglycan. It catalyzes the formation of...;
Region: GT_MraY; cd06852"
/db_xref="CDD:133462"
misc_feature 446000..446005
/gene="mraY"
/locus_tag="Sbal_0399"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:133462"
misc_feature 446447..446458
/gene="mraY"
/locus_tag="Sbal_0399"
/note="putative catalytic motif [active]"
/db_xref="CDD:133462"
misc_feature order(446606..446608,446624..446638)
/gene="mraY"
/locus_tag="Sbal_0399"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:133462"
gene 446747..448066
/gene="murD"
/locus_tag="Sbal_0400"
/db_xref="GeneID:4843064"
CDS 446747..448066
/gene="murD"
/locus_tag="Sbal_0400"
/note="UDP-N-acetylmuramoylalanine--D-glutamate ligase;
involved in peptidoglycan biosynthesis; cytoplasmic;
catalyzes the addition of glutamate to the nucleotide
precursor UDP-N-acetylmuramoyl-L-alanine during cell wall
formation"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase"
/protein_id="YP_001048801.1"
/db_xref="GI:126172652"
/db_xref="InterPro:IPR004101"
/db_xref="InterPro:IPR005762"
/db_xref="InterPro:IPR006162"
/db_xref="InterPro:IPR013221"
/db_xref="GeneID:4843064"
/translation="MQNQYSHIVLGLGATGLSVVRYLCGKGITPLVMDSRRQPPGAET
LATSFPDVKLISGGFDCRYLVQATQIIISPGIATYTPEVRAAVDMGIEVIGDVELFAR
EIADRKPCVIGITGSNGKSTVTTLVGEMAREAGIAVAVGGNIGVPALDLLHENADLFV
LELSSFQLETTHSLKCVVATCLNISEDHMDRYSDIAAYREAKLRLYKQSRAVLFNRDD
KLTVPPEPMNQNSFGLAAPETDEWGISDSKIYHGSSEIMPITEVSLIGSHNHANLLAA
MALVDVVGVDKQVMAKVARSFTGLSHRCEVVGIKNGVTYVNDSKATNVGATVAALDGL
SDHLGDIILIAGGDGKGADFKPLGVALAKVTHLITLGRDGKKIAALKDGAVRVETMAA
AVTKAAELATSGDIVLLSPACASLDMYSNFMARGDDFRNLVEQLNGE"
misc_feature 446747..448060
/gene="murD"
/locus_tag="Sbal_0400"
/note="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase; Provisional; Region: murD; PRK03803"
/db_xref="CDD:179650"
misc_feature 447089..447544
/gene="murD"
/locus_tag="Sbal_0400"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature 447650..>447748
/gene="murD"
/locus_tag="Sbal_0400"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 448056..449267
/locus_tag="Sbal_0401"
/db_xref="GeneID:4843067"
CDS 448056..449267
/locus_tag="Sbal_0401"
/note="TIGRFAM: cell division protein FtsW;
PFAM: cell cycle protein;
KEGG: shn:Shewana3_3744 cell division protein FtsW"
/codon_start=1
/transl_table=11
/product="cell division protein FtsW"
/protein_id="YP_001048802.1"
/db_xref="GI:126172653"
/db_xref="InterPro:IPR001182"
/db_xref="InterPro:IPR006162"
/db_xref="InterPro:IPR013437"
/db_xref="GeneID:4843067"
/translation="MASDVRQLSLFGRLRSAMPNWQRDTEVPGVQLYDRALLAAVLSL
IGFGFVMVMSASMPEAQTLTGNPFYFMTRHVGYLVGCLAIAAFVLRVEMQTWQRWSPM
LLLVVGLMLLAVLVVGTTVNGATRWLSIGPIRIQVAEVAKFAFAIYMAGYLVRRHQEV
RENAKGFYKPIAVFAIYAVLILMQPDLGTVVVLFVGTVGLLFLAGARLLDFFALIFAG
VLAFVALVLLEPYRMRRVTSFMDPWQDPFGSGYQLTQSLMAYGRGDWFGQGLGNSIQK
LEYLPEAHTDFIFAVIGEELGFIGIIAVLSVLLFVALRSIRLGNLCLAMDKPFEGYLG
YAIGIWVCFQTVVNVGASIGMLPTKGLTLPFISYGGSSLWVMTAAAMMLLRIDYERRM
TLVQAVQGRLK"
misc_feature 448077..449246
/locus_tag="Sbal_0401"
/note="Cell cycle protein; Region: FTSW_RODA_SPOVE;
cl00511"
/db_xref="CDD:214078"
gene 449267..450355
/gene="murG"
/locus_tag="Sbal_0402"
/db_xref="GeneID:4844103"
CDS 449267..450355
/gene="murG"
/locus_tag="Sbal_0402"
/EC_number="2.4.1.227"
/note="UDP-N-acetylglucosamine--N-acetylmuramyl-
(pentapeptide) pyrophosphoryl-undecaprenol
N-acetylglucosamine transferase; involved in cell wall
formation; inner membrane-associated; last step of
peptidoglycan synthesis"
/codon_start=1
/transl_table=11
/product="undecaprenyldiphospho-muramoylpentapeptide
beta-N- acetylglucosaminyltransferase"
/protein_id="YP_001048803.1"
/db_xref="GI:126172654"
/db_xref="InterPro:IPR004276"
/db_xref="InterPro:IPR006009"
/db_xref="InterPro:IPR007235"
/db_xref="GeneID:4844103"
/translation="MTPAGKRILVMAGGTGGHVFPALAVAKYLAQQGWQVRWLGTADR
MEARLVPQYGFDIDFIDIKGVRGNGLIRKLAAPFKVVRSILQAKAVIAEFKPDVVLGM
GGFASGPGGVAARLAGIPLVLHEQNAIPGMTNKLLSRIATQVLCAFKNTFTTVKAKVV
GNPIRQELIALGAEPKPEADEALKVLVVGGSLGAKVFNDLMPEAVAILSQQQFVTVWH
QVGKDNLTGVKAAYQQHGQDGGVNIAEFIDDMEAAYRWADVVLCRAGALTVSELAAVG
LPSILVPYPHAVDDHQTRNGQVLVEAGAAFLLPQAILDVNKLAGKLQLLANDRTELAR
MGQRARDVAVLDATEQVAAVCISLAEKG"
misc_feature 449282..450349
/gene="murG"
/locus_tag="Sbal_0402"
/note="undecaprenyldiphospho-muramoylpentapeptide beta-N-
acetylglucosaminyltransferase; Provisional; Region: murG;
PRK00726"
/db_xref="CDD:179100"
misc_feature 449285..450328
/gene="murG"
/locus_tag="Sbal_0402"
/note="MurG is an N-acetylglucosaminyltransferase, the
last enzyme involved in the intracellular phase of
peptidoglycan biosynthesis. It transfers
N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4
hydroxyl of a lipid-linked N-acetylmuramoyl
pentapeptide...; Region: GT1_MurG; cd03785"
/db_xref="CDD:99961"
misc_feature order(449315..449317,449645..449647,449837..449839,
449921..449923,450002..450004,450014..450016,
450059..450070,450077..450079,450116..450118,
450137..450142,450149..450151)
/gene="murG"
/locus_tag="Sbal_0402"
/note="active site"
/db_xref="CDD:99961"
misc_feature order(449486..449488,449495..449497,449528..449530,
449612..449614,449687..449689)
/gene="murG"
/locus_tag="Sbal_0402"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99961"
gene 450358..451824
/gene="murC"
/locus_tag="Sbal_0403"
/db_xref="GeneID:4844708"
CDS 450358..451824
/gene="murC"
/locus_tag="Sbal_0403"
/note="Catalyzes the formation of
UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate
and L-alanine in peptidoglycan synthesis"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramate--L-alanine ligase"
/protein_id="YP_001048804.1"
/db_xref="GI:126172655"
/db_xref="InterPro:IPR000713"
/db_xref="InterPro:IPR004101"
/db_xref="InterPro:IPR005758"
/db_xref="InterPro:IPR013221"
/db_xref="GeneID:4844708"
/translation="MTKTERYAQLRSMIPEMRRIKRIHFVGIGGAGMGGIAEVLVNEG
YQVSGSDIAQNAVTDRLCLLGAKIQIGHAAENVQQVDVVVVSTAINLENPEILAAKEL
RIPIVRRAEMLAELMRYRHGVAIAGTHGKTTTTSLIASVYGQAGRDPTFVIGGLLNSA
GTNARLGTSRYLIAEADESDASFLHLQPMVSVVTNIEADHMDTYGGDFEKLKSTFVDF
LHNLPFYGVAVVCIDDAVVREIMPRIGRQLVTYGFSDDADVQALNFSQQGHQCRFTVR
RKGKADLDLVLNLPGQHNVLNALAAIAVATEDEIDDSAITQALVEFQGIGRRFQHLGK
FATPKGEVMLVDDYGHHPSEVAATIKAARAGWPDKRLVMAYQPHRYTRTRDLYEDFVE
VLSQVDCLLLLDVYSAGEAPITGADGRALCRSIRLRGQLDPIFIASPDQLAEVLPDVL
QEGDLLLTQGAGNIGALSRLLATTELGFAVAELPAQAS"
misc_feature 450397..451773
/gene="murC"
/locus_tag="Sbal_0403"
/note="UDP-N-acetylmuramate--L-alanine ligase;
Provisional; Region: murC; PRK00421"
/db_xref="CDD:179018"
misc_feature 450421..450720
/gene="murC"
/locus_tag="Sbal_0403"
/note="Mur ligase family, catalytic domain; Region:
Mur_ligase; pfam01225"
/db_xref="CDD:201670"
misc_feature 450736..451236
/gene="murC"
/locus_tag="Sbal_0403"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature 451330..451596
/gene="murC"
/locus_tag="Sbal_0403"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 451937..452725
/locus_tag="Sbal_0404"
/db_xref="GeneID:4843217"
CDS 451937..452725
/locus_tag="Sbal_0404"
/note="PFAM: cell division protein FtsQ;
Polypeptide-transport-associated domain protein,
FtsQ-type;
KEGG: son:SO4217 cell division protein FtsQ"
/codon_start=1
/transl_table=11
/product="cell division protein FtsQ"
/protein_id="YP_001048805.1"
/db_xref="GI:126172656"
/db_xref="InterPro:IPR005548"
/db_xref="InterPro:IPR013685"
/db_xref="GeneID:4843217"
/translation="MSWSDKRRHWRARMSRVNWYLWSGAGFLFFIVASFVFGGYQLHK
FLNDASTLPIEAVAIKGERAYTTDKDIQVALQDLMQRSFFSADITLVQQALEDLPWVY
RASVRREWPAKLRVYLQEQQPAAHWNGDSWLNVHGEVFEAPSHPELEHLPQLSGPDDM
GLEVLTVYAQINSLLKINGFTLASLYLTPRHAWHATLGNGIVLDLGREDKIARIQRFI
TVYPVLAKQEKSVARVDLRYDTGLAVGWGDAQTREPIINDQKPR"
misc_feature 451967..452701
/locus_tag="Sbal_0404"
/note="cell division protein FtsQ; Provisional; Region:
PRK10775"
/db_xref="CDD:182720"
misc_feature 452096..452299
/locus_tag="Sbal_0404"
/note="POTRA domain, FtsQ-type; Region: POTRA_1;
pfam08478"
/db_xref="CDD:149506"
misc_feature 452306..452647
/locus_tag="Sbal_0404"
/note="Cell division protein FtsQ; Region: FtsQ;
pfam03799"
/db_xref="CDD:202772"
gene 452706..453941
/locus_tag="Sbal_0405"
/db_xref="GeneID:4843823"
CDS 452706..453941
/locus_tag="Sbal_0405"
/note="PFAM: cell division protein FtsA;
KEGG: shn:Shewana3_3740 cell division protein FtsA"
/codon_start=1
/transl_table=11
/product="cell division protein FtsA"
/protein_id="YP_001048806.1"
/db_xref="GI:126172657"
/db_xref="InterPro:IPR003494"
/db_xref="GeneID:4843823"
/translation="MIKNQDRNLIVGLDIGTSKVAVIIGEVLPDGEISIVGLGNHPSR
GMDKGGVNDLDSIVRSVQRALDQAELMADCQVSSVYLSISGKHIACQNENGMVSINDE
EVTQEDVDNVIHTARSVKIPTERRILHVLPQEYAIDVQDGIRSPIGMSGMRMEAKVHI
VTCANDMAKNITKSVERCGLKVDDLVFSGIASADAVLTFDEKDLGVCIVDIGGGTTDI
AVYTNGALRHCAVVPVAGNQVTNDIAKIFRTPSSHAEQIKVQFACARSSMVSREDSIE
VPSVGGRPSRSMSRHTLAEVVEPRYQELFELVLKELKDSGLEDQIAAGIVLTGGTASI
QGVVDIAEATFGMPVRVASPLPIKGLYEYVDQSIYSTGVGLLHYGARRVIERQFERPE
RQGVTSAWNRVQSWFKGEF"
misc_feature 452706..453938
/locus_tag="Sbal_0405"
/note="cell division protein FtsA; Reviewed; Region: ftsA;
PRK09472"
/db_xref="CDD:181887"
misc_feature 452736..453278
/locus_tag="Sbal_0405"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cd00012"
/db_xref="CDD:212657"
misc_feature order(452745..452756,452760..452762,452766..452768,
453270..453272)
/locus_tag="Sbal_0405"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
misc_feature 453321..453761
/locus_tag="Sbal_0405"
/note="Cell division protein FtsA; Region: FtsA;
pfam14450"
/db_xref="CDD:206616"
gene 453975..455162
/locus_tag="Sbal_0406"
/db_xref="GeneID:4842135"
CDS 453975..455162
/locus_tag="Sbal_0406"
/note="GTPase; similar structure to tubulin; forms
ring-shaped polymers at the site of cell division; other
proteins such as FtsA, ZipA, and ZapA, interact with and
regulate FtsZ function"
/codon_start=1
/transl_table=11
/product="cell division protein FtsZ"
/protein_id="YP_001048807.1"
/db_xref="GI:126172658"
/db_xref="InterPro:IPR000158"
/db_xref="InterPro:IPR003008"
/db_xref="InterPro:IPR008280"
/db_xref="GeneID:4842135"
/translation="MFEIMDTHSDDAVIKVIGVGGGGGNAVEHMVKHNIEGVEFIVTN
TDAQALRKSGAGSTIQLGRDVTKGLGAGANPDVGRAAAEEDRENIRAAIKGSDMIFIA
AGMGGGTGTGAAPVVAQIAREEGILTVAVVTKPFPFEGKKRMAYAEQGIAELAKHVDS
LITIPNEKLLKVLGRGTSLLDAFAAANNVLLGAVQGIAELITRPGLINVDFADVKTVM
SEMGNAMMGTGVARGEDRAEEAAEAAVASPLLEDIDLAGARGVLVNITAGMDMSIEEF
ETVGNHVKAYASDNATVVVGAVIDPEMSDELRVTVVATGIGAEKRPDIQLVSKPAPRP
EPVVVEPKVEAYVEEAVHVNYAAPKGNVLPAAPLPAPQPAPSTKHELDYLDIPAFLRK
QAD"
misc_feature 453975..455159
/locus_tag="Sbal_0406"
/note="cell division protein FtsZ; Validated; Region:
PRK09330"
/db_xref="CDD:181781"
misc_feature 454047..454919
/locus_tag="Sbal_0406"
/note="FtsZ is a GTPase that is similar to the eukaryotic
tubulins and is essential for cell division in
prokaryotes. FtsZ is capable of polymerizing in a
GTP-driven process into structures similar to those formed
by tubulin. FtsZ forms a ring-shaped septum at...; Region:
FtsZ_type1; cd02201"
/db_xref="CDD:100021"
misc_feature order(454047..454049,454119..454121,454284..454304,
454377..454382,454401..454403,454470..454472,
454521..454523,454530..454535,454542..454544)
/locus_tag="Sbal_0406"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:100021"
misc_feature order(454593..454598,454602..454604,454782..454793,
454800..454802)
/locus_tag="Sbal_0406"
/note="SulA interaction site; other site"
/db_xref="CDD:100021"
gene 455343..456263
/gene="lpxC"
/locus_tag="Sbal_0407"
/db_xref="GeneID:4842740"
CDS 455343..456263
/gene="lpxC"
/locus_tag="Sbal_0407"
/note="zinc-dependent; catalyzes the deacetylation of
UDP-(3-O-acyl)-N-acetylglucosamine to
UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second
step of lipid A biosynthesis"
/codon_start=1
/transl_table=11
/product="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine
deacetylase"
/protein_id="YP_001048808.1"
/db_xref="GI:126172659"
/db_xref="InterPro:IPR004463"
/db_xref="GeneID:4842740"
/translation="MIFQRTVQKMVKTTGVGLHSGNKVTLSIMPAPVNSGIVLVRTDL
SPAVAIPAKAEQVRETTMCTALVNDEGIRISTIEHLFAALAGLGIDNAVIEVDAPEIP
IMDGSASPFVFLLQSAGIKEQAAPKKYLKIKRPVRVEDGDKWAELKPFKGFRVNFKID
FAHPEIARSQQHVVMDFSTSAFVKDISRARTFGFMRDIEYLRANNLALGGSMENAVVL
DEYRVLNPDGLRYEDEFVKHKILDAFGDLYVAGHAILGEFTAYKTGHALNNQLVRALL
AQQDAWELVSFEKEADVPVSFTVPGGAVFA"
misc_feature 455343..456233
/gene="lpxC"
/locus_tag="Sbal_0407"
/note="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine
deacetylase; Reviewed; Region: lpxC; PRK13186"
/db_xref="CDD:183882"
misc_feature 455346..456182
/gene="lpxC"
/locus_tag="Sbal_0407"
/note="UDP-3-O-acyl N-acetylglycosamine deacetylase;
Region: LpxC; pfam03331"
/db_xref="CDD:202596"
gene complement(456276..456722)
/locus_tag="Sbal_0408"
/db_xref="GeneID:4842741"
CDS complement(456276..456722)
/locus_tag="Sbal_0408"
/note="KEGG: shn:Shewana3_3737 conserved hypothetical
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048809.1"
/db_xref="GI:126172660"
/db_xref="GeneID:4842741"
/translation="MKKPPQDLSQLLHQSGKLPDLAEKAELLMYLNHHVKQIIAGPVA
EQLKVANFRQGVLVVETTSAAWAARINFQKPKLLAQLQAETLPILTAIEVKVNPRLAM
YDAKPKQGHKELSPAAAEHIAALAENIGGSLGEKLKRLASLASRNK"
misc_feature complement(456279..456683)
/locus_tag="Sbal_0408"
/note="Protein of unknown function (DUF721); Region:
DUF721; cl02324"
/db_xref="CDD:207571"
gene 456750..457649
/locus_tag="Sbal_0409"
/db_xref="GeneID:4844779"
CDS 456750..457649
/locus_tag="Sbal_0409"
/note="PFAM: peptidase M23B;
KEGG: shn:Shewana3_3736 peptidase M23B"
/codon_start=1
/transl_table=11
/product="peptidase M23B"
/protein_id="YP_001048810.1"
/db_xref="GI:126172661"
/db_xref="InterPro:IPR002886"
/db_xref="GeneID:4844779"
/translation="MSVTVFIQGRNGVTRWQPSKRWLLLPILLLATGSGIYQHNSARF
QDQQASVDNDRLVREQQKKQVLELKSATESQLAMLVTHVARMQAKITRLEALGQQVAQ
QNKLDEDFDFSSEVGVGGLSELGTNIELGQLIDDMDKLASRIDNNNVQLSLLETVSSN
HHIDDERYISGIPLDKGWLSSPYGLRNDPFNGRRTVHKGIDFTGREGAKVVATAAGVV
TWAGNMFGYGELVEIDHGNGLHTRYGHNKALSVTVGDVVAKGDAIASMGSTGRSTGAH
VHYEVLRGGQQIDPQKFVYRKAS"
misc_feature <457263..457625
/locus_tag="Sbal_0409"
/note="Membrane proteins related to metalloendopeptidases
[Cell envelope biogenesis, outer membrane]; Region: NlpD;
COG0739"
/db_xref="CDD:31082"
misc_feature 457332..457619
/locus_tag="Sbal_0409"
/note="Peptidase family M23; Region: Peptidase_M23;
pfam01551"
/db_xref="CDD:201854"
gene 457710..460436
/locus_tag="Sbal_0410"
/gene_synonym="azi; div"
/db_xref="GeneID:4845652"
CDS 457710..460436
/locus_tag="Sbal_0410"
/gene_synonym="azi; div"
/note="functions in protein export; can interact with
acidic membrane phospholipids and the SecYEG protein
complex; binds to preproteins; binds to ATP and undergoes
a conformational change to promote membrane insertion of
SecA/bound preprotein; ATP hydrolysis appears to drive
release of the preprotein from SecA and deinsertion of
SecA from the membrane; additional proteins SecD/F/YajC
aid SecA recycling; exists in an equilibrium between
monomers and dimers; may possibly form higher order
oligomers; proteins in this cluster correspond SecA1;
SecA2 is not essential and seems to play a role in
secretion of a subset of proteins"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecA"
/protein_id="YP_001048811.1"
/db_xref="GI:126172662"
/db_xref="InterPro:IPR000185"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR004027"
/db_xref="InterPro:IPR011115"
/db_xref="InterPro:IPR011116"
/db_xref="InterPro:IPR011130"
/db_xref="InterPro:IPR014018"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:4845652"
/translation="MFGKLLTKVFGSRNDRTLKGLQKIVISINALEADYEKLTDEALK
AKTAEFRERLAAGASLDSIMAEAFATVREASKRVFDMRHFDVQLLGGMVLDSNRIAEM
RTGEGKTLTATLPAYLNALTGKGVHVITVNDYLARRDAENNRPLFEFLGLTVGINVAG
LGQHEKKAAYNADITYGTNNEFGFDYLRDNMAFSPQERVQRPLHYALIDEVDSILIDE
ARTPLIISGAAEDSSELYIKINTLIPNLIRQDKEDTEEYVGEGDYSIDEKAKQVHFTE
RGQEKVENLLIERGMLAEGDSLYSAANISLLHHVNAALRAHTLFERDVDYIVQDNEVI
IVDEHTGRTMPGRRWSEGLHQAVEAKEGVHIQNENQTLASITFQNYFRQYEKLAGMTG
TADTEAFEFQHIYGLDTVVVPTNRPMVRKDMADLVYLTADEKYQAIIKDIKDCRERGQ
PVLVGTVSIEQSELLARLMVQEKIPHEVLNAKFHEREAEIVAQAGRTGSVTIATNMAG
RGTDIVLGGNWNMEIDELDNPTAEQKAKIKADWQIRHDEVVAAGGLHILGTERHESRR
IDNQLRGRAGRQGDAGSSRFYLSMEDSLMRIFASDRVSGMMKKLGMEEGEAIEHPWVS
RAIENAQRKVEARNFDIRKQLLEFDDVANDQRQVVYAQRNELMDAESIEDTIQNIQDD
VIGAVIDQYIPPQSVEELWDIPGLEQRLHQEFMLKLPIQEWLDKEDDLHEESLRERII
TAWGDAYKAKEEMVGAQVLRQFEKAVMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKN
PKQEYKRESFELFQQLLNTLKHDVISVLSKVQVQAQSDVEEMEARRREEDAKIQRDYQ
HAAAESLVGSSDEHEAVTAQAPMIRDGEKVGRNDPCPCGSGRKYKQCHGKLS"
misc_feature 457710..460433
/locus_tag="Sbal_0410"
/gene_synonym="azi; div"
/note="preprotein translocase subunit SecA; Reviewed;
Region: PRK13107"
/db_xref="CDD:183863"
misc_feature 458391..458783
/locus_tag="Sbal_0410"
/gene_synonym="azi; div"
/note="SecA preprotein cross-linking domain; Region:
SecA_PP_bind; smart00958"
/db_xref="CDD:198026"
misc_feature 460371..460427
/locus_tag="Sbal_0410"
/gene_synonym="azi; div"
/note="SEC-C motif; Region: SEC-C; pfam02810"
/db_xref="CDD:202406"
gene 461209..462745
/locus_tag="Sbal_R0008"
/db_xref="GeneID:4842053"
rRNA 461209..462745
/locus_tag="Sbal_R0008"
/product="16S ribosomal RNA"
/db_xref="GeneID:4842053"
gene 462846..462922
/locus_tag="Sbal_R0009"
/note="tRNA-Ile1"
/db_xref="GeneID:4843446"
tRNA 462846..462922
/locus_tag="Sbal_R0009"
/product="tRNA-Ile"
/db_xref="GeneID:4843446"
gene 463060..463135
/locus_tag="Sbal_R0010"
/note="tRNA-Ala1"
/db_xref="GeneID:4843447"
tRNA 463060..463135
/locus_tag="Sbal_R0010"
/product="tRNA-Ala"
/db_xref="GeneID:4843447"
gene 463504..466406
/locus_tag="Sbal_R0011"
/db_xref="GeneID:4843448"
rRNA 463504..466406
/locus_tag="Sbal_R0011"
/product="23S ribosomal RNA"
/db_xref="GeneID:4843448"
gene 466548..466662
/locus_tag="Sbal_R0012"
/db_xref="GeneID:4843449"
rRNA 466548..466662
/locus_tag="Sbal_R0012"
/product="5S ribosomal RNA"
/db_xref="GeneID:4843449"
gene 466697..466772
/locus_tag="Sbal_R0013"
/note="tRNA-Thr1"
/db_xref="GeneID:4843450"
tRNA 466697..466772
/locus_tag="Sbal_R0013"
/product="tRNA-Thr"
/db_xref="GeneID:4843450"
gene 466812..466926
/locus_tag="Sbal_R0014"
/db_xref="GeneID:4843451"
rRNA 466812..466926
/locus_tag="Sbal_R0014"
/product="5S ribosomal RNA"
/db_xref="GeneID:4843451"
gene complement(467476..467967)
/locus_tag="Sbal_0411"
/db_xref="GeneID:4843452"
CDS complement(467476..467967)
/locus_tag="Sbal_0411"
/note="binds specifically to the major sigma factor sigma
70; active in stationary phase"
/codon_start=1
/transl_table=11
/product="anti-RNA polymerase sigma 70 factor"
/protein_id="YP_001048812.1"
/db_xref="GI:126172663"
/db_xref="InterPro:IPR007448"
/db_xref="GeneID:4843452"
/translation="MECIMLRELEKAEQKWGGSNKLIDQWLKNRRKLLVHYCQIAGLP
PYGKSEKSLPSFEHVKSFCDLLVDYVSEGHFEVYDRVVNACSEYGESSKTLAQQVLPK
ITPTTNAALDFNDKYAETQDDLVLYQLDKDLSELAHNMETRFELEDELLEVLHRKHSE
HTQ"
misc_feature complement(467479..467955)
/locus_tag="Sbal_0411"
/note="anti-RNA polymerase sigma 70 factor; Provisional;
Region: PRK11718"
/db_xref="CDD:183289"
gene 468027..468320
/locus_tag="Sbal_0412"
/db_xref="GeneID:4845567"
CDS 468027..468320
/locus_tag="Sbal_0412"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048813.1"
/db_xref="GI:126172664"
/db_xref="GeneID:4845567"
/translation="MRICVNDEMDKPAVLHQKIQIKSPTIETYRWASKVYSRLDATSF
LIVLASADFLYQRLGTGATFFCLSVTSLRINEQYVIWITFSGLCGQIDASDGE"
gene 468413..469477
/gene="hemE"
/locus_tag="Sbal_0413"
/db_xref="GeneID:4841361"
CDS 468413..469477
/gene="hemE"
/locus_tag="Sbal_0413"
/EC_number="4.1.1.37"
/note="catalyzes the formation of coproporphyrinogen from
uroporphyrinogen III"
/codon_start=1
/transl_table=11
/product="uroporphyrinogen decarboxylase"
/protein_id="YP_001048814.1"
/db_xref="GI:126172665"
/db_xref="InterPro:IPR000257"
/db_xref="InterPro:IPR006361"
/db_xref="GeneID:4841361"
/translation="MAELKNDRYLRALLKEPVDVTPVWMMRQAGRYLPEYKATRAQAG
DFMSLCKNHELACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERP
TDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGS
SKTFEKIKKMAYAEPMALHMLLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHSA
YREFSLRYMQKIIDGLTRFADGRKVPVTLFTKGGGLWLEAMAETGCDALGLDWTVDIA
DARRRVGHKVALQGNMDPSMLYAPIPRIEEEVGHILAGYGEGTGHVFNLGHGIHQHVD
PEHAGAFIKAVHAQSKQYHK"
misc_feature 468440..469453
/gene="hemE"
/locus_tag="Sbal_0413"
/note="Uroporphyrinogen decarboxylase (URO-D) is a dimeric
cytosolic enzyme that decarboxylates the four acetate side
chains of uroporphyrinogen III (uro-III) to create
coproporphyrinogen III, without requiring any prosthetic
groups or cofactors. This reaction...; Region: URO-D;
cd00717"
/db_xref="CDD:48141"
misc_feature order(468488..468505,468518..468520,468530..468532,
468548..468550,468629..468649,468683..468685,
468698..468700,468842..468844,468872..468874,
468890..468892,469031..469033,469037..469042,
469154..469156,469391..469393)
/gene="hemE"
/locus_tag="Sbal_0413"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:48141"
misc_feature order(468491..468493,468503..468505,468641..468643,
468872..468874,469037..469039,469391..469393)
/gene="hemE"
/locus_tag="Sbal_0413"
/note="active site"
/db_xref="CDD:48141"
gene 469909..471255
/locus_tag="Sbal_0414"
/db_xref="GeneID:4845153"
CDS 469909..471255
/locus_tag="Sbal_0414"
/note="KEGG: shm:Shewmr7_3589 diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s);
TIGRFAM: PAS sensor protein;
PFAM: PAS fold-4 domain protein; PAS fold domain protein;
SMART: PAS domain containing protein"
/codon_start=1
/transl_table=11
/product="putative PAS/PAC sensor protein"
/protein_id="YP_001048815.1"
/db_xref="GI:126172666"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR013656"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:4845153"
/translation="MHIGKKIMVFIAGFCLPAVVIVSYCLGCWYDHRVELLRQDSANR
ELANIQQQFQIDVDRLTFLTNIYALPLSQLDEEQLKKLESSWHDSSMSANLSWYILRQ
GELHTFFPNAHPFASDKLHEIASAIINANKSSVAGAYLIGEQTYVITAVASAPNESVL
LVRQLTNNDLLEYAQALLVTKVTMSHSNAVTASVEGVHSDTIEIPSLLKDKPVYLQVQ
FSEGPFQEVKFKLDWVSLGFILFGVFIVGLGYIWLRSGLLKPFKNLMRQLALVDPMSS
VYQPVACEGNEELEVLASRVNSLLARIYQQKERAKITLESIAEAVILTDVDAKVIYMN
PRAESLLDVASCYALDQSLASLLKAGDQLNQAVFTCIRLGESSPQVEKIKLLTASPRI
MERSISNLRNHDKEIVGTVVVLRDITQEELLKHQLQKRANFDSITGLLNRQAFDEQ"
misc_feature 470848..471171
/locus_tag="Sbal_0414"
/note="PAS fold; Region: PAS_4; pfam08448"
/db_xref="CDD:117025"
misc_feature 470857..471159
/locus_tag="Sbal_0414"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(470905..470907,470917..470919,470935..470937,
470974..470985,471055..471057,471070..471072)
/locus_tag="Sbal_0414"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(470965..470967,470977..470979,470995..470997,
471004..471009,471091..471093,471097..471099)
/locus_tag="Sbal_0414"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 471145..>471252
/locus_tag="Sbal_0414"
/note="Class III nucleotidyl cyclases; Region:
Nucleotidyl_cyc_III; cl11967"
/db_xref="CDD:212337"
gene 471319..472488
/locus_tag="Sbal_0415"
/db_xref="GeneID:4843467"
CDS 471319..472488
/locus_tag="Sbal_0415"
/note="PFAM: GGDEF domain containing protein; EAL domain
protein;
KEGG: son:SO0437 sensory box protein"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase/phosphodiesterase"
/protein_id="YP_001048816.1"
/db_xref="GI:126172667"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR001633"
/db_xref="GeneID:4843467"
/translation="MINDSCGHTAGDRMLAMVAKAMQACLGPQEQLARLAGDEFGLVI
CNRSALSVAQLLKQMIAQVSLQVLNDKNCNYKVGLSIGVAFGRAPYIDAQELLKDADI
ACIAAKAKGANQIHFYDDKDKELTYQRNAPKWAVRIAQAIEENELILYYQPIRGLGSG
PQRQRMEILLRIQEPCGRILAPAQFIAAAERFKLMPDIDKEVIRKAFLWLSLHPVLWP
DHCISFNLSGNSLGAEGMVEYIAQQQHIFDIPSQCICFEITETTAIQNRNRGMEMLKQ
LRKLGFSFALDDFGSGFASYGYLRELPVDYVKIDGCFIKNLAVNAKDYAIVKSIQDVC
RVMGIETVAEFVENQDIIDRLLSIGINYAQGYAIGRPQPLANYREQYEMRLAQRA"
misc_feature <471322..471609
/locus_tag="Sbal_0415"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature order(471325..471330,471340..471342,471352..471354,
471418..471420,471424..471435)
/locus_tag="Sbal_0415"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(471406..471408,471490..471492)
/locus_tag="Sbal_0415"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature 471430..471432
/locus_tag="Sbal_0415"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature 471727..472446
/locus_tag="Sbal_0415"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene 472564..473367
/locus_tag="Sbal_0416"
/db_xref="GeneID:4843468"
CDS 472564..473367
/locus_tag="Sbal_0416"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR;
KEGG: shn:Shewana3_0437 short-chain
dehydrogenase/reductase SDR"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase"
/protein_id="YP_001048817.1"
/db_xref="GI:126172668"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:4843468"
/translation="MDGLTGKVVIITGASEGIGRALAVAMARMGCQLVISARNETRLA
SLALEIANYGLPPFVFAADVSRAEQCEALIEATVAHYGHLDILINNAGMTMWSRFDEL
TQLSVLEDIMRVNYLGPAYLTHAALPHLKASKGQVVVVASVAGLTGVPTRSGYAASKH
AVIGFFDSLRIELADDNVAVTVICPDFVVSQIHKRALDGAGNPLGKSPMQEAKILTAE
QCANMMLPVIATRGRQLITSLRGRLGRWLKLIAPGLIDKIARRAIASGH"
misc_feature 472573..473337
/locus_tag="Sbal_0416"
/note="11beta-hydroxysteroid dehydrogenase type 1
(11beta-HSD1)-like, classical (c) SDRs; Region:
11beta-HSD1_like_SDR_c; cd05332"
/db_xref="CDD:187593"
misc_feature 472579..473364
/locus_tag="Sbal_0416"
/note="short chain dehydrogenase; Provisional; Region:
PRK06181"
/db_xref="CDD:180447"
misc_feature order(472600..472617,472672..472680,472747..472755,
472831..472839,472843..472845,472903..472905,
472918..472920,472981..472989,473026..473028,
473038..473040,473116..473127,473131..473133,
473137..473142)
/locus_tag="Sbal_0416"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187593"
misc_feature order(472762..472764,472852..472866,472876..472878,
472885..472890,472897..472902,472909..472914,
472924..472926,472933..472935,472999..473022,
473029..473034,473041..473046,473050..473058,
473062..473070,473074..473079,473158..473172,
473275..473277,473299..473304,473308..473310,
473314..473319,473323..473331,473335..473337)
/locus_tag="Sbal_0416"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187593"
misc_feature order(472837..472839,472846..472848,472987..472995,
473008..473010,473017..473019,473026..473028,
473116..473124,473137..473142,473149..473154)
/locus_tag="Sbal_0416"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187593"
misc_feature order(472906..472908,472987..472989,473026..473028,
473038..473040)
/locus_tag="Sbal_0416"
/note="active site"
/db_xref="CDD:187593"
gene complement(473386..473613)
/locus_tag="Sbal_0417"
/db_xref="GeneID:4842848"
CDS complement(473386..473613)
/locus_tag="Sbal_0417"
/note="KEGG: son:SO0439 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048818.1"
/db_xref="GI:126172669"
/db_xref="GeneID:4842848"
/translation="MGYSIKDLIYQGEKSGVHNWGTLEGKSFYWHPDWFHIAEDMTGH
MATATIDKQGEKATQSEAEQSIIKHLNKSGK"
gene complement(473785..477000)
/locus_tag="Sbal_0418"
/db_xref="GeneID:4844405"
CDS complement(473785..477000)
/locus_tag="Sbal_0418"
/note="KEGG: son:SO0440 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001048819.1"
/db_xref="GI:126172670"
/db_xref="InterPro:IPR000437"
/db_xref="GeneID:4844405"
/translation="MRIRLLCASIAILLSGCGGGSEDAGTTTPPTQPPVQPPAPVQYI
ASSVSANGGALDPSSQKVESGKSAIFSITADTGFTLEAITGCGGTLNALTYTTAVITA
DCTITPTFIANAENAIKHQDHRLASASELIDFSIAKLASIDIKRKAHINQLYQGVGSS
ISWHPTHDSITFSSFMPENTFTVLPSNVDGSGESAVRGLVMAGEQQGQRYAAMAGNLF
SVNTSAQTDTLLKNILGWLTKGADKTDGLSIVTTQMPSKADSWDFPHNEGIRTWLTNN
YPAAHSINAANTCDYSELSNCIDTLKPDVILISDIDRQSLGFAGIKAAIAKAKAAGIP
LLLSNYWRNQSPMLSPLYLEMGLSTSGNYWSKLNANDLSVTDVLAEDTALTKVNNLLG
KLNEASFDTSVLNDCTGNYLSCNAAAFVDSFKAGADWYRSNAETLDNNAIDVFTKADF
PLMKAGLLLADKYRSEIDYPIAYSEHAQWQQALFADWTVSYARVHNLAQPDLGEYVTD
RANLCKGSNAHYAYPATVSERKTISVPYAGQWTTTGWYALPGQTIKLTRLDSSAANVE
IKLNYHRRNTNRAYEQKVYRGPLELAQQRLRLAQGKSIEFSSPYGGPIYLYINGDASS
VDVNAEHVAKHPTIMDFSNPAEIAAFNERIQNTELPHVDLRTDGAEQHLRRDRFLNAI
GTYVPDVNALLNSIVDDHINSVYTLAGLKIQGKSLSESLPADVLAACKGLFGDDCIDN
SLHTRTIIQHANYDQNAQCGAGCSGNPWDAAWNIDPTGWGDNHELGHNLQTNRLNVQY
AAANNSDNRAGYSSRAGENSNNIFPYVVKWKTYYLRDGNTGTVTDGHMNHKDLFYVFM
SDAAGTTDTSGKRVVFGANCKVLDAGEDRYTAPWSSNAYAVHNGYRMAFYIQMALKAH
GITLSDGTMLNNGFNLFTLLYQHSRIFGKYANNASDWEANRSKLGFSQFPFDGNSVYG
GKTVKDIPGNDFMLVSLSQLTGKDWRSHFDMLGLRYSSLAAAQTVANATSGTMPMGMY
ELETDLPPANMSQGLTFVPLSLTDGTTQWKGVGSPTQCTKP"
misc_feature complement(474523..475383)
/locus_tag="Sbal_0418"
/note="Peptidase M60-like family; Region: M60-like;
pfam13402"
/db_xref="CDD:205580"
gene complement(477178..478476)
/locus_tag="Sbal_0419"
/db_xref="GeneID:4841375"
CDS complement(477178..478476)
/locus_tag="Sbal_0419"
/EC_number="6.3.4.13"
/note="catalyzes the formation of
N(1)-(5-phospho-D-ribosyl)glycinamide from
5-phospho-D-ribosylamine and glycine in purine
biosynthesis"
/codon_start=1
/transl_table=11
/product="phosphoribosylamine--glycine ligase"
/protein_id="YP_001048820.1"
/db_xref="GI:126172671"
/db_xref="InterPro:IPR000115"
/db_xref="InterPro:IPR003135"
/db_xref="InterPro:IPR011761"
/db_xref="GeneID:4841375"
/translation="MKVLVIGGGGREHALAWKAAQSAQVETVYVAPGNAGTALEPNVE
NLAISATDIPALLDFAKTNKIELTIVGPEAPLVMGVVDAFNAAGLPIFGPTKAAAQLE
GSKAFTKDFLARHNIPTAGYKNCTEISDAKAFVRELTATTGYPVVIKADGLAAGKGVI
IAQDQAEADAAIDDMLAGNKFGDAGSHVVIEEFLKGEEASFIVMVDGKNILPMATSQD
HKARDNGDYGPNTGGMGAYSPAPVVTQAVHDWTVANVIRPTVDGMAAEGNVYTGFLYA
GLMISPDGSAKVLEYNCRFGDPETQPIMMRLKSDLVELCLAATRGELDKVTAEYDERA
AVGVVLAAGGYPDEYRKFDVIDGLSLGDNDGKVFHAGTEMKDGHVVTNGGRVLCATAL
GNTVTEAQKAAYKLVDEIHWDDVYFRTDIGYRAIAREQQD"
misc_feature complement(477193..478476)
/locus_tag="Sbal_0419"
/note="phosphoribosylamine--glycine ligase; Provisional;
Region: PRK00885" 