LOCUS NC_010067 4600800 bp DNA circular CON 10-JUN-2013
DEFINITION Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str.
RSK2980 chromosome, complete genome.
ACCESSION NC_010067
VERSION NC_010067.1 GI:161501984
DBLINK Project: 58191
BioProject: PRJNA58191
KEYWORDS .
SOURCE Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str.
RSK2980
ORGANISM Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str.
RSK2980
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Salmonella.
REFERENCE 1 (bases 1 to 4600800)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 2 (bases 1 to 4600800)
AUTHORS McClelland,M., Sanderson,E.K., Porwollik,S., Spieth,J.,
Clifton,W.S., Fulton,R., Chunyan,W., Wollam,A., Shah,N., Pepin,K.,
Bhonagiri,V., Nash,W., Johnson,M., Thiruvilangam,P. and Wilson,R.
CONSRTM The Salmonella enterica serovar Arizonae Genome Sequencing Project
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2007) Genetics, Genome Sequencing Center, 4444
Forest Park Parkway, St. Louis, MO 63108, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000880.
Salmonella enterica subspecies IIIa (Arizonae) serovar
62:z4,z23:--Most bacteria in the species S. enterica belong to one
of seven subspecies; all but subspecies I normally grow only in
cold-blooded animals. Subspecies IIIa (S. Arizonae) is naturally
found in reptiles, but also causes outbreaks of salmonellosis in
turkeys and sheep and can occasionally produce both gastroenteritis
and serious disseminated disease in humans. Many human infections
can be traced to contact with reptiles or ingestion of various
reptile products, particularly from rattlesnakes. Fewer than ten
cases in humans are typically reported in the US each year.
The strain of S. Arizonae (62:z4,z23:-) being sequenced is
CDC346-86; it was named RSK2980 by R.K. Selander and is strain
SARC5 of the Salmonella Reference C set. This serovar is of
interest because of its taxonomic position. It appears to be the
most divergent subspecies among the S. enterica. It can be obtained
from the American Type Culture Collection as ATCC BAA-731, or the
Salmonella Genetic Stock Centre as SGSC4693. The genome was
sequenced to 8X coverage, using plasmid and fosmid libraries and
was finished to an error rate of less than 1 per 10,000 bases.
Automated annotation was performed and manual annotation will
continue in the labs of Michael McClelland and Kenneth Sanderson.
The National Institute of Allergy and Infectious Diseases (NIAID),
National Institutes of Health (NIH) has funded this project.
Coding sequences below are predicted using GeneMark v3.3 and
Glimmer2 v2.13.Intergenic regions not spanned by GeneMark and
Glimmer2 were blasted against NCBI's non-redundant (NR) database
and predictions generated based on protein alignments. RNA genes
were determined using tRNAscan-SE 1.23 or Rfam v8.0. This sequence
was finished as follows unless otherwise noted: all regions were
double stranded, sequenced with an alternate chemistries or covered
by high quality data(i.e., phred quality >=30);an attempt was made
to resolve all sequencing problems, such as compressions and
repeats; all regions were covered by sequence from more than one
m13 subclone.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..4600800
/organism="Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980"
/mol_type="genomic DNA"
/strain="RSK2980"
/serovar="62:z4,z23:--"
/sub_species="arizonae"
/culture_collection="ATCC:BAA-731"
/db_xref="taxon:882884"
unsure 3
/note="Sequence derived from one plasmid subclone"
gene 978..2318
/locus_tag="SARI_00001"
/db_xref="GeneID:5760952"
CDS 978..2318
/locus_tag="SARI_00001"
/inference="protein motif:HMMPanther:IPR001354"
/inference="protein motif:HMMPfam:IPR013341"
/inference="protein motif:HMMPfam:IPR013342"
/inference="protein motif:ScanRegExp:IPR001354"
/inference="similar to AA sequence:INSD:AAL21841.1"
/note="'KEGG: stm:STM2961 8.8e-243 ygcY; putative
D-glucarate dehydratase K01706;
COG: COG4948 L-alanine-DL-glutamate epimerase and related
enzymes of enolase superfamily;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569097.1"
/db_xref="GI:161501985"
/db_xref="InterPro:IPR001354"
/db_xref="InterPro:IPR013341"
/db_xref="InterPro:IPR013342"
/db_xref="GeneID:5760952"
/translation="MTRQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
NAGHTGVGEAPGGEVIYQTLVDAIPMVLGQEVARLNSVVQRVHKGNQAADFDTFGKGA
WTFELRVNAVAALEAALLDLLGQALNVPVCELLGPGKQRDAVTVLGYLFYIGDRTKTE
LPYLESTPGSHEWYRLRHQEALNSDTVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
VRALKKRFPDARITVDPNGAWLLDEAIALCKGLNDVLAYAEDPCGAEQGFSGREVMAE
FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLT
WGCHSNNHFDISLAMFTHVGAAAPGKPTAIDTHWIWQEGDCRLTKNPLEIKNGTIAVP
DAPGLGVELDWEQVRKAHDAYKKLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH"
misc_feature 990..2312
/locus_tag="SARI_00001"
/note="glucarate dehydratase; Region: glucar-dehydr;
TIGR03247"
/db_xref="CDD:211799"
misc_feature 999..2225
/locus_tag="SARI_00001"
/note="D-Glucarate dehydratase (GlucD) catalyzes the
dehydration of both D-glucarate and L-idarate to form
5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction
of the catabolic pathway for (D)-glucarate. GlucD belongs
to the enolase superfamily of enzymes; Region:
D-glucarate_dehydratase; cd03323"
/db_xref="CDD:239439"
misc_feature order(1053..1055,1068..1070,1422..1424,1587..1589,
1593..1595,1677..1679,1683..1685,1752..1754,1839..1841,
1989..1997,2076..2078)
/locus_tag="SARI_00001"
/note="active site"
/db_xref="CDD:239439"
misc_feature order(1215..1220,1227..1229,1353..1358,1374..1385,
1788..1793,1803..1805,1809..1814,1857..1862,1872..1874,
1944..1946,1953..1955,1965..1976)
/locus_tag="SARI_00001"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:239439"
gene 2375..3679
/locus_tag="SARI_00002"
/db_xref="GeneID:5760510"
CDS 2375..3679
/locus_tag="SARI_00002"
/inference="protein motif:HMMPanther:IPR001354"
/inference="protein motif:HMMPfam:IPR013342"
/inference="similar to AA sequence:INSD:AAX66806.1"
/note="'KEGG: sec:SC2900 8.7e-236 gudD; D-glucarate
dehydratase K01706;
COG: COG4948 L-alanine-DL-glutamate epimerase and related
enzymes of enolase superfamily;
Psort location: vesicles of secretory system, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569098.1"
/db_xref="GI:161501986"
/db_xref="InterPro:IPR001354"
/db_xref="InterPro:IPR013342"
/db_xref="GeneID:5760510"
/translation="MQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIP
GGEKIRKTLEDAIPLVMGKTLGEYKNVLTAVRNQFADRDAGGRGLQTFDLRTTIHVVT
GIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDEQC
DWYRLRHEEAMTPETVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAKRFPNA
RVTLDPNGAWSLNEAINIGRYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTAT
NMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDI
SLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGMVQVPAKPGLGVEIDM
DQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR"
misc_feature 2375..3676
/locus_tag="SARI_00002"
/note="glucarate dehydratase; Region: glucar-dehydr;
TIGR03247"
/db_xref="CDD:211799"
misc_feature 2375..3589
/locus_tag="SARI_00002"
/note="D-Glucarate dehydratase (GlucD) catalyzes the
dehydration of both D-glucarate and L-idarate to form
5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction
of the catabolic pathway for (D)-glucarate. GlucD belongs
to the enolase superfamily of enzymes; Region:
D-glucarate_dehydratase; cd03323"
/db_xref="CDD:239439"
misc_feature order(2417..2419,2432..2434,2786..2788,2951..2953,
2957..2959,3041..3043,3047..3049,3116..3118,3203..3205,
3353..3361,3440..3442)
/locus_tag="SARI_00002"
/note="active site"
/db_xref="CDD:239439"
misc_feature order(2579..2584,2591..2593,2717..2722,2738..2749,
3152..3157,3167..3169,3173..3178,3221..3226,3236..3238,
3308..3310,3317..3319,3329..3340)
/locus_tag="SARI_00002"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:239439"
gene 3757..4899
/locus_tag="SARI_00003"
/db_xref="GeneID:5760511"
CDS 3757..4899
/locus_tag="SARI_00003"
/inference="protein motif:HMMPanther:IPR004381"
/inference="protein motif:HMMPfam:IPR004381"
/inference="protein motif:HMMTigr:IPR004381"
/inference="similar to AA sequence:INSD:CAD06073.1"
/note="'KEGG: stt:t2868 3.3e-188 glycerate kinase K00865;
COG: COG1929 Glycerate kinase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569099.1"
/db_xref="GI:161501987"
/db_xref="InterPro:IPR004381"
/db_xref="GeneID:5760511"
/translation="MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADG
GEGTVEAMVEATAGRIVHVDVTGPLGRRVNAFYGLSGDARSAFIEMAAASGLEQVPPA
LRDPLKTTSWGTGELIRHALDAGVEHIIVGIGGSATNDGGAGMMQALGARLRDAQGND
IAQGGIGLETLASIDISGLDKRLSACRIDVACDVTNPLTGKEGASAVFGPQKGATPEM
IERLDTALIRYAHLIARELHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDAL
HLEERLANADLVITGEGRIDSQTIHGKVPIGVANIAKRHNKPVIGIAGSLTADVGVVH
EHGLDAVFSVIYTICTLEEALDNAAENVRMTARNVAATLKIGSLLR"
misc_feature 3757..4884
/locus_tag="SARI_00003"
/note="Glycerate kinase [Carbohydrate transport and
metabolism]; Region: COG1929"
/db_xref="CDD:224840"
gene complement(5009..7765)
/locus_tag="SARI_00004"
/db_xref="GeneID:5760512"
CDS complement(5009..7765)
/locus_tag="SARI_00004"
/inference="protein motif:BlastProDom:IPR001789"
/inference="protein motif:Gene3D:IPR003594"
/inference="protein motif:HMMPfam:IPR001789"
/inference="protein motif:HMMPfam:IPR003594"
/inference="protein motif:HMMPfam:IPR003660"
/inference="protein motif:HMMPfam:IPR003661"
/inference="protein motif:HMMPfam:IPR008207"
/inference="protein motif:HMMPIR:IPR009184"
/inference="protein motif:HMMSmart:IPR001789"
/inference="protein motif:HMMSmart:IPR003594"
/inference="protein motif:HMMSmart:IPR003660"
/inference="protein motif:HMMSmart:IPR003661"
/inference="protein motif:HMMSmart:IPR008207"
/inference="protein motif:superfamily:IPR003594"
/inference="protein motif:superfamily:IPR008207"
/inference="protein motif:superfamily:IPR009082"
/inference="protein motif:superfamily:IPR011006"
/note="part of the two-component regulatory system with
UvrY; involved in the regulation of carbon metabolism via
the csrA/csrB regulatory system"
/codon_start=1
/transl_table=11
/product="hybrid sensory histidine kinase BarA"
/protein_id="YP_001569100.1"
/db_xref="GI:161501988"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR008207"
/db_xref="InterPro:IPR009082"
/db_xref="InterPro:IPR009184"
/db_xref="InterPro:IPR011006"
/db_xref="GeneID:5760512"
/translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
GSSIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFH
LDPSQMQLPAGAPFPRHLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYV
ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTI
ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTL
NIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIR
DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
GSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYS
PTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKL
KQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDASKIAMTVMAVDDNPANLKL
IGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQ
QTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPE
PAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGL
VDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAK
KILG"
misc_feature complement(5012..7765)
/locus_tag="SARI_00004"
/note="hybrid sensory histidine kinase BarA; Provisional;
Region: PRK11107"
/db_xref="CDD:236848"
misc_feature complement(7232..7675)
/locus_tag="SARI_00004"
/note="Uncharacterized signal transduction histidine
kinase domain (DUF2222); Region: DUF2222; pfam09984"
/db_xref="CDD:220502"
misc_feature complement(7025..7162)
/locus_tag="SARI_00004"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(7025..7030,7037..7042,7046..7051,
7058..7063,7067..7072,7118..7120,7124..7129,7136..7141,
7145..7150,7157..7162))
/locus_tag="SARI_00004"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(6707..6895)
/locus_tag="SARI_00004"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(6722..6724,6734..6736,6743..6745,
6755..6757,6764..6766,6776..6778,6824..6826,6833..6835,
6845..6847,6854..6856,6866..6868,6878..6880))
/locus_tag="SARI_00004"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(6860..6862)
/locus_tag="SARI_00004"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(6218..6541)
/locus_tag="SARI_00004"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature complement(order(6230..6232,6236..6241,6254..6256,
6260..6262,6308..6319,6398..6403,6407..6409,6413..6415,
6419..6421,6500..6502,6509..6511,6521..6523))
/locus_tag="SARI_00004"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(6509..6511)
/locus_tag="SARI_00004"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(order(6311..6313,6317..6319,6401..6403,
6407..6409))
/locus_tag="SARI_00004"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
misc_feature complement(5774..6190)
/locus_tag="SARI_00004"
/note="Uncharacterized domain of BarA-like signal
transduction histidine kinases [Signal transduction
mechanisms]; Region: COG4999"
/db_xref="CDD:227332"
misc_feature complement(5414..5749)
/locus_tag="SARI_00004"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature complement(order(5453..5458,5465..5467,5522..5524,
5588..5590,5612..5614,5741..5746))
/locus_tag="SARI_00004"
/note="active site"
/db_xref="CDD:238088"
misc_feature complement(5612..5614)
/locus_tag="SARI_00004"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature complement(order(5588..5596,5600..5605))
/locus_tag="SARI_00004"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature complement(5450..5458)
/locus_tag="SARI_00004"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature complement(<5093..5302)
/locus_tag="SARI_00004"
/note="Histidine Phosphotransfer domain, involved in
signalling through a two part component systems in which
an autophosphorylating histidine protein kinase serves as
a phosphoryl donor to a response regulator protein; the
response regulator protein is...; Region: HPT; cd00088"
/db_xref="CDD:238041"
misc_feature complement(order(5117..5119,5126..5128,5171..5176,
5183..5185))
/locus_tag="SARI_00004"
/note="putative binding surface; other site"
/db_xref="CDD:238041"
misc_feature complement(5183..5185)
/locus_tag="SARI_00004"
/note="active site"
/db_xref="CDD:238041"
gene 7823..9118
/gene="rumA"
/locus_tag="SARI_00005"
/db_xref="GeneID:5760513"
CDS 7823..9118
/gene="rumA"
/locus_tag="SARI_00005"
/inference="protein motif:HMMPfam:IPR002792"
/inference="protein motif:HMMPfam:IPR010280"
/inference="protein motif:HMMTigr:IPR001566"
/inference="protein motif:ScanRegExp:IPR010280"
/inference="similar to AA sequence:SwissProt:Q5PEJ4"
/note="in Escherichia coli this enzyme catalyzes the
SAM-dependent methylation of U1939 in the 23S ribomal RNA;
binds an iron-sulfur cluster [4Fe-4S]"
/codon_start=1
/transl_table=11
/product="23S rRNA 5-methyluridine methyltransferase"
/protein_id="YP_001569101.1"
/db_xref="GI:161501989"
/db_xref="InterPro:IPR001566"
/db_xref="InterPro:IPR002792"
/db_xref="InterPro:IPR010280"
/db_xref="GeneID:5760513"
/translation="MAQFYSAKRRVTTRQIITVKVNDLDPFGQGVARHNGKALFIPGL
LPEESAEVIITEDKKQFSRARVLRRLNDSPERETPRCPHFGVCGGCQQQHIGIALQQR
SKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCLSDKTLQMGFRKAGSNDIVNVEQ
CPILAPQLEALLPRIRACLTSLHGTRHLGHVELVQAGNGTLMILRHTAPLSAADKEKL
ERFSHSEGLSLFLAPFSEILESVTGETPWYDSHGLRLAFSPRDFIQVNEAVNQQMVAR
ALEWLDVRAEDRVLDLFCGMGNFTLPLATSAASVVGVEGVPALVEKGRENAIRNGLHN
VTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRVVYVSCNPAT
LARDSEALVNAGYEATRLAMLDMFPHTGHLESMVLFVRM"
misc_feature 7826..9112
/gene="rumA"
/locus_tag="SARI_00005"
/note="23S rRNA m(5)U1939 methyltransferase; Reviewed;
Region: rumA; PRK13168"
/db_xref="CDD:237291"
misc_feature 7850..8023
/gene="rumA"
/locus_tag="SARI_00005"
/note="TRAM domain; Region: TRAM; pfam01938"
/db_xref="CDD:110897"
misc_feature 8684..8986
/gene="rumA"
/locus_tag="SARI_00005"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(8696..8716,8762..8767,8840..8848,8906..8908)
/gene="rumA"
/locus_tag="SARI_00005"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 9170..11404
/gene="relA"
/locus_tag="SARI_00006"
/db_xref="GeneID:5760514"
CDS 9170..11404
/gene="relA"
/locus_tag="SARI_00006"
/inference="protein motif:Gene3D:IPR012675"
/inference="protein motif:HMMPfam:IPR002912"
/inference="protein motif:HMMPfam:IPR004095"
/inference="protein motif:HMMPfam:IPR007685"
/inference="protein motif:HMMTigr:IPR004811"
/inference="protein motif:superfamily:IPR008921"
/inference="protein motif:superfamily:IPR012676"
/note="(p)ppGpp synthetase; catalyzes the formation of
pppGpp and ppGpp from ATP and GTP or GDP"
/codon_start=1
/transl_table=11
/product="GDP/GTP pyrophosphokinase"
/protein_id="YP_001569102.1"
/db_xref="GI:161501990"
/db_xref="InterPro:IPR002912"
/db_xref="InterPro:IPR004095"
/db_xref="InterPro:IPR004811"
/db_xref="InterPro:IPR007685"
/db_xref="InterPro:IPR008921"
/db_xref="InterPro:IPR012675"
/db_xref="InterPro:IPR012676"
/db_xref="GeneID:5760514"
/translation="MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQ
QTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
IVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
REVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLL
HERRIDREHYIEEFVGHLRAEMKNEGVLAEVYGRPKHIYSIWRKMQKKHLAFDELFDV
RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
EIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGE
MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
FTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
RQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNK
PSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
ITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVTANDRSGLLRD
ITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
LHGN"
misc_feature 9170..11398
/gene="relA"
/locus_tag="SARI_00006"
/note="(p)ppGpp synthetase I/GTP pyrophosphokinase;
Provisional; Region: relA; PRK10872"
/db_xref="CDD:182797"
misc_feature 9344..9745
/gene="relA"
/locus_tag="SARI_00006"
/note="HD domain; Region: HD_4; pfam13328"
/db_xref="CDD:222047"
misc_feature 9848..10216
/gene="relA"
/locus_tag="SARI_00006"
/note="Nucleotidyltransferase (NT) domain of RelA- and
SpoT-like ppGpp synthetases and hydrolases; Region:
NT_Rel-Spo_like; cd05399"
/db_xref="CDD:143389"
misc_feature order(9923..9925,9929..9931,9992..9997,10007..10009,
10091..10093,10097..10099,10112..10114,10118..10120,
10124..10126,10136..10138,10172..10174,10178..10180,
10184..10186,10208..10213)
/gene="relA"
/locus_tag="SARI_00006"
/note="synthetase active site [active]"
/db_xref="CDD:143389"
misc_feature order(9923..9925,10091..10093,10097..10099,10112..10114,
10118..10120,10124..10126,10136..10138,10172..10174,
10178..10180,10208..10210)
/gene="relA"
/locus_tag="SARI_00006"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143389"
misc_feature order(9992..9994,10172..10174)
/gene="relA"
/locus_tag="SARI_00006"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143389"
misc_feature 10385..10564
/gene="relA"
/locus_tag="SARI_00006"
/note="TGS_RelA_SpoT: The RelA (SpoT) protein, also
referred to as ppGpp hydrolase/synthetase, is a
ribosome-associated protein that is activated during amino
acid starvation and thought to mediate the stringent
response. RelA contains a TGS domain, named after...;
Region: TGS_RelA_SpoT; cd01668"
/db_xref="CDD:133438"
misc_feature 11174..11389
/gene="relA"
/locus_tag="SARI_00006"
/note="ACT domain found C-terminal of the RelA/SpoT
domains; Region: ACT_RelA-SpoT; cd04876"
/db_xref="CDD:153148"
gene 11437..12270
/gene="mazG"
/locus_tag="SARI_00007"
/db_xref="GeneID:5760515"
CDS 11437..12270
/gene="mazG"
/locus_tag="SARI_00007"
/inference="protein motif:HMMPfam:IPR004518"
/inference="protein motif:HMMPIR:IPR012199"
/inference="protein motif:HMMPIR:IPR012231"
/inference="protein motif:HMMTigr:IPR011551"
/inference="protein motif:superfamily:IPR011029"
/inference="similar to AA sequence:REFSEQ:YP_151973.1"
/note="functions in degradation of stringent response
intracellular messenger ppGpp; in Escherichia coli this
gene is co-transcribed with the toxin/antitoxin genes
mazEF; activity of MazG is inhibited by MazEF in vitro;
ppGpp inhibits mazEF expression; MazG thus works in
limiting the toxic activity of the MazF toxin induced
during starvation; MazG also interacts with the GTPase
protein Era"
/codon_start=1
/transl_table=11
/product="nucleoside triphosphate pyrophosphohydrolase"
/protein_id="YP_001569103.1"
/db_xref="GI:161501991"
/db_xref="InterPro:IPR004518"
/db_xref="InterPro:IPR011029"
/db_xref="InterPro:IPR011551"
/db_xref="InterPro:IPR012199"
/db_xref="InterPro:IPR012231"
/db_xref="GeneID:5760515"
/translation="MALYSSGLRFQDILMNQIDRLLNIMQRLRDPEGGCPWDKEQTFA
SIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGLFDFNDICAAI
SDKLERRHPHVFGALSAENSEEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQ
KIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVIDQAKLEEEMGDLLFATVNM
ARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEID
L"
misc_feature 11479..12264
/gene="mazG"
/locus_tag="SARI_00007"
/note="nucleoside triphosphate pyrophosphohydrolase;
Reviewed; Region: mazG; PRK09562"
/db_xref="CDD:236569"
misc_feature 11491..11835
/gene="mazG"
/locus_tag="SARI_00007"
/note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
3.6.1.8) N-terminal tandem-domain of MazG proteins from
Escherichia coli and bacterial homologs; Region:
NTP-PPase_MazG_Nterm; cd11528"
/db_xref="CDD:212135"
misc_feature order(11494..11499,11506..11508,11563..11568,11575..11577,
11584..11589,11596..11601,11608..11610,11617..11619,
11632..11634,11641..11646,11653..11670,11674..11676,
11683..11685,11710..11712,11719..11733,11737..11745,
11749..11754)
/gene="mazG"
/locus_tag="SARI_00007"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:212135"
misc_feature order(11593..11595,11602..11604,11650..11652,11659..11661)
/gene="mazG"
/locus_tag="SARI_00007"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:212135"
misc_feature 11896..12249
/gene="mazG"
/locus_tag="SARI_00007"
/note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
3.6.1.8) C-terminal tandem-domain of MazG proteins from
Escherichia coli and bacterial homologs'; Region:
NTP-PPase_MazG_Cterm; cd11529"
/db_xref="CDD:212136"
misc_feature order(11896..11904,11908..11913,11920..11922,11932..11934,
11941..11949,11983..11988,12004..12009,12046..12054,
12058..12066,12070..12075,12079..12081,12100..12108,
12115..12117,12121..12150,12157..12162,12169..12171,
12214..12216,12223..12225,12235..12237)
/gene="mazG"
/locus_tag="SARI_00007"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:212136"
misc_feature order(11947..11955,11980..11982,11992..11994,12001..12003,
12043..12045,12052..12057,12064..12066)
/gene="mazG"
/locus_tag="SARI_00007"
/note="active site"
/db_xref="CDD:212136"
misc_feature order(11989..11994,12001..12003,12052..12057,12064..12066)
/gene="mazG"
/locus_tag="SARI_00007"
/note="putative chemical substrate binding site [chemical
binding]; other site"
/db_xref="CDD:212136"
misc_feature order(11992..11994,12001..12003,12055..12057,12064..12066)
/gene="mazG"
/locus_tag="SARI_00007"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:212136"
gene 12498..14135
/gene="pyrG"
/locus_tag="SARI_00008"
/db_xref="GeneID:5760516"
CDS 12498..14135
/gene="pyrG"
/locus_tag="SARI_00008"
/inference="protein motif:HMMPanther:IPR004468"
/inference="protein motif:HMMPfam:IPR000991"
/inference="protein motif:HMMPfam:IPR004468"
/inference="protein motif:HMMTigr:IPR004468"
/inference="protein motif:ScanRegExp:IPR012998"
/inference="similar to AA sequence:REFSEQ:YP_151972.1"
/note="CTP synthase; cytidine triphosphate synthetase;
catalyzes the ATP-dependent amination of UTP to CTP with
either L-glutamine or ammonia as the source of nitrogen;
in Escherichia coli this enzyme forms a homotetramer"
/codon_start=1
/transl_table=11
/product="CTP synthetase"
/protein_id="YP_001569104.1"
/db_xref="GI:161501992"
/db_xref="InterPro:IPR000991"
/db_xref="InterPro:IPR004468"
/db_xref="InterPro:IPR012998"
/db_xref="GeneID:5760516"
/translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
AVEIGREHTLFMHLTLVPYMAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
EQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVE
TRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARN
VAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLND
DSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPW
FVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK"
misc_feature 12504..14126
/gene="pyrG"
/locus_tag="SARI_00008"
/note="CTP synthetase; Validated; Region: pyrG; PRK05380"
/db_xref="CDD:235437"
misc_feature 12510..13265
/gene="pyrG"
/locus_tag="SARI_00008"
/note="CTP synthetase (CTPs) is a two-domain protein,
which consists of an N-terminal synthetase domain and
C-terminal glutaminase domain. The enzymes hydrolyze the
amide bond of glutamine to ammonia and glutamate at the
glutaminase domains and transfer nascent...; Region: CTGs;
cd03113"
/db_xref="CDD:239387"
misc_feature order(12537..12539,12546..12557,12615..12617,12621..12629,
12705..12707,12711..12713,12720..12725,12915..12917,
12921..12923)
/gene="pyrG"
/locus_tag="SARI_00008"
/note="Catalytic site [active]"
/db_xref="CDD:239387"
misc_feature order(12540..12554,12615..12617,12924..12926,13056..13064,
13164..13166)
/gene="pyrG"
/locus_tag="SARI_00008"
/note="active site"
/db_xref="CDD:239387"
misc_feature order(12615..12629,12921..12926,12942..12944,13056..13064,
13164..13166)
/gene="pyrG"
/locus_tag="SARI_00008"
/note="UTP binding site [chemical binding]; other site"
/db_xref="CDD:239387"
misc_feature 13365..14096
/gene="pyrG"
/locus_tag="SARI_00008"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in Cytidine Triphosphate Synthetase; Region:
GATase1_CTP_Synthase; cd01746"
/db_xref="CDD:153217"
misc_feature order(13545..13559,13632..13637,13644..13646,13704..13706,
13899..13910,14040..14042,14046..14048)
/gene="pyrG"
/locus_tag="SARI_00008"
/note="active site"
/db_xref="CDD:153217"
misc_feature order(13551..13553,13635..13637)
/gene="pyrG"
/locus_tag="SARI_00008"
/note="putative oxyanion hole; other site"
/db_xref="CDD:153217"
misc_feature order(13632..13634,14040..14042,14046..14048)
/gene="pyrG"
/locus_tag="SARI_00008"
/note="catalytic triad [active]"
/db_xref="CDD:153217"
gene 14218..15516
/gene="eno"
/locus_tag="SARI_00009"
/db_xref="GeneID:5760517"
CDS 14218..15516
/gene="eno"
/locus_tag="SARI_00009"
/inference="protein motif:BlastProDom:IPR000941"
/inference="protein motif:FPrintScan:IPR000941"
/inference="protein motif:HMMPanther:IPR000941"
/inference="protein motif:HMMPfam:IPR000941"
/inference="protein motif:HMMTigr:IPR000941"
/inference="protein motif:ScanRegExp:IPR000941"
/inference="similar to AA sequence:INSD:AAX66792.1"
/note="enolase; catalyzes the formation of
phosphoenolpyruvate from 2-phospho-D-glycerate in
glycolysis"
/codon_start=1
/transl_table=11
/product="phosphopyruvate hydratase"
/protein_id="YP_001569105.1"
/db_xref="GI:161501993"
/db_xref="InterPro:IPR000941"
/db_xref="GeneID:5760517"
/translation="MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
SREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTEN
KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGS
NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
misc_feature 14218..15513
/gene="eno"
/locus_tag="SARI_00009"
/note="enolase; Provisional; Region: eno; PRK00077"
/db_xref="CDD:234617"
misc_feature 14233..15459
/gene="eno"
/locus_tag="SARI_00009"
/note="Enolase: Enolases are homodimeric enzymes that
catalyse the reversible dehydration of
2-phospho-D-glycerate to phosphoenolpyruvate as part of
the glycolytic and gluconeogenesis pathways. The reaction
is facilitated by the presence of metal ions; Region:
enolase; cd03313"
/db_xref="CDD:239429"
misc_feature order(14239..14241,14245..14271,14281..14283,14317..14319,
14695..14703,14764..14769,14776..14781,14788..14793,
14830..14835,14854..14856,14860..14862,15337..15345,
15412..15420,15424..15429,15436..15438,15445..15450,
15457..15459)
/gene="eno"
/locus_tag="SARI_00009"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:239429"
misc_feature order(14341..14343,14953..14955,15085..15087,15166..15168)
/gene="eno"
/locus_tag="SARI_00009"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:239429"
misc_feature order(14692..14694,14842..14844,15241..15243,15325..15333,
15394..15396)
/gene="eno"
/locus_tag="SARI_00009"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:239429"
gene 15649..16842
/locus_tag="SARI_00010"
/db_xref="GeneID:5760518"
CDS 15649..16842
/locus_tag="SARI_00010"
/inference="protein motif:HMMPfam:IPR002559"
/inference="protein motif:superfamily:IPR012337"
/inference="similar to AA sequence:REFSEQ:YP_540438.1"
/note="'COG: NOG04673 non supervised orthologous group;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569106.1"
/db_xref="GI:161501994"
/db_xref="InterPro:IPR002559"
/db_xref="InterPro:IPR012337"
/db_xref="GeneID:5760518"
/translation="MPARQVCQNFFRDALAPLHKYRQNALLDATIALINGASLTLTSI
GRYLPGTAQVKNKIKRVDRLRGNESLHRNIPLIFRNIIAMLTSQLSLCVIAVDWSGYP
SQEHHVLRASLICDGRSIPLLRWIVPSEKQQNAKVQQAFLNTLAEAVNPEARVIIVTD
AGFQNAWFRHIESLGWDFIGRIRGNIQMRLEAKGEYWFRRQELQASSKPEYLGPGTLA
RSEYARCDGHFYLHKKEPKGRKNKRSRCGIARPSQLKDASPAAKEPWLIFSSTDDFKP
RVIMKLYSRRMQIEQHFRDEKSERFGFGLRASYSRSAGRVLALRLLATLSTIVLWLVG
YHAENKGLHLRYQANSVRIWRVITYLTLAENVLRQSPLILKRTVLRTVLNHLARIYQN
MVLVY"
misc_feature <16069..16626
/locus_tag="SARI_00010"
/note="Transposase DDE domain; Region: DDE_Tnp_1;
pfam01609"
/db_xref="CDD:216602"
gene 16852..16989
/locus_tag="SARI_00011"
/db_xref="GeneID:5760519"
CDS 16852..16989
/locus_tag="SARI_00011"
/inference="similar to AA sequence:REFSEQ:YP_217872.1"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569107.1"
/db_xref="GI:161501995"
/db_xref="GeneID:5760519"
/translation="MGIPQRFGGVFCICSIAQPLHMTGQTKSAIINDYHLNRERYAVP
D"
gene 16973..17644
/locus_tag="SARI_00012"
/db_xref="GeneID:5760520"
CDS 16973..17644
/locus_tag="SARI_00012"
/inference="similar to AA sequence:REFSEQ:NP_457340.1"
/note="'KEGG: hpa:HPAG1_0914 8.5e-06 hypothetical protein
K04071;
COG: COG0602 Organic radical activating enzymes;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569108.1"
/db_xref="GI:161501996"
/db_xref="GeneID:5760520"
/translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
DKLSDREVSLYSILAKTKESDKWGAASSEDLLTVINRQDYTARHVVITGGEPCIHDLM
PLTDLLEKSGFSSQIETSGTHEVLCTPNTWVTVSPKVNMRGGYDVLTQALERANEIKH
PVGRIRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHK
YLNIA"
misc_feature 16973..17641
/locus_tag="SARI_00012"
/note="Organic radical activating enzymes
[Posttranslational modification, protein turnover,
chaperones]; Region: NrdG; COG0602"
/db_xref="CDD:223675"
misc_feature 16997..17641
/locus_tag="SARI_00012"
/note="putative 7-cyano-7-deazaguanosine (preQ0)
biosynthesis protein QueE; Region: rSAM_QueE_Ecoli;
TIGR04322"
/db_xref="CDD:213935"
gene complement(17943..18305)
/locus_tag="SARI_00013"
/db_xref="GeneID:5760521"
CDS complement(17943..18305)
/locus_tag="SARI_00013"
/inference="protein motif:BlastProDom:IPR007115"
/inference="protein motif:HMMPanther:IPR007115"
/inference="protein motif:HMMPfam:IPR007115"
/inference="protein motif:HMMPIR:IPR007115"
/inference="protein motif:HMMTigr:IPR007116"
/inference="similar to AA sequence:REFSEQ:NP_457338.1"
/note="'KEGG: sty:STY3077 4.5e-65
6-pyruvoyltetrahydropterin synthase K01737;
COG: COG0720 6-pyruvoyl-tetrahydropterin synthase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569109.1"
/db_xref="GI:161501997"
/db_xref="InterPro:IPR007115"
/db_xref="InterPro:IPR007116"
/db_xref="GeneID:5760521"
/translation="MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEV
DPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLL
SAVMVKETCTAGCVYRGE"
misc_feature complement(17946..18302)
/locus_tag="SARI_00013"
/note="Tunnelling fold (T-fold). The five known T-folds
are found in five different enzymes with different
functions: dihydroneopterin-triphosphate epimerase
(DHNTPE), dihydroneopterin aldolase (DHNA) , GTP
cyclohydrolase I (GTPCH-1), 6-pyrovoyl...; Region: TFold;
cl00263"
/db_xref="CDD:241736"
misc_feature complement(order(17961..17963,17979..17981,18210..18212,
18216..18218))
/locus_tag="SARI_00013"
/note="active site"
/db_xref="CDD:238351"
gene 18795..20594
/gene="cysJ"
/locus_tag="SARI_00014"
/db_xref="GeneID:5760522"
CDS 18795..20594
/gene="cysJ"
/locus_tag="SARI_00014"
/inference="protein motif:FPrintScan:IPR001094"
/inference="protein motif:FPrintScan:IPR001709"
/inference="protein motif:HMMPfam:IPR001433"
/inference="protein motif:HMMPfam:IPR003097"
/inference="protein motif:HMMPfam:IPR008254"
/inference="protein motif:HMMTigr:IPR010199"
/inference="similar to AA sequence:SwissProt:Q57KH7"
/note="catalyzes the reduction of sulfite to sulfide in
the biosynthesis of L-cysteine from sulfate; a
flavoprotein with flavin reductase activity"
/codon_start=1
/transl_table=11
/product="sulfite reductase subunit alpha"
/protein_id="YP_001569110.1"
/db_xref="GI:161501998"
/db_xref="InterPro:IPR001094"
/db_xref="InterPro:IPR001433"
/db_xref="InterPro:IPR001709"
/db_xref="InterPro:IPR003097"
/db_xref="InterPro:IPR008254"
/db_xref="InterPro:IPR010199"
/db_xref="GeneID:5760522"
/translation="MTTQAPLTGLLPLNPQQLARLQAATTDFTPEQLAWVSGYFWGVL
NPRSGADAVARAPERGSLGITLISASQTGNARRVAEALRDDLLAVNLNVNLVNAGDYK
FKQIACEKLLVVVTSTQGEGEPPEEAVALHKFLFSKKAPRLNNTAFAVFSLGDTSYEF
FCQAGKDFDNKLAELGGERLLDRVDADVEYQTVAAQWRARIVDVLKSRTPVTTPVPSV
VSGAVNEIHTSPYTKEAPLRASLSVNQKITGRNSEKDVRHIEIDLGDSGLCYQPGDAL
GVWYQNDPALVKEIVELLWLKGDEPVAVDGKLLPLTEALQWHFELTVNTAGIVENYAT
LTRSEFLLPLVGDKAQLQHYAAATPIADMLRFSPSQLDADALVGLLRPLTPRLYSIAS
SQAEVENEVHLTVGVVRYDIEGRARAGGASSFLADRVDDEGEVRVFIEHNDNFRLPTN
PETPIIMIGSGTGIAPFRAFIQQRAADEASGKNWLFFGNPHFTEDFLYQVEWQRYVKE
GLLSRIDLAWSRDQKEKIYVQDKLRERGAELWRWINDGAHIYVCGDANRMAKDVEQAL
LEVIVEFGGMDLESADEYLSELRVARRYQRDVY"
misc_feature 18795..20591
/gene="cysJ"
/locus_tag="SARI_00014"
/note="sulfite reductase subunit alpha; Provisional;
Region: cysJ; PRK10953"
/db_xref="CDD:182862"
misc_feature 18990..19385
/gene="cysJ"
/locus_tag="SARI_00014"
/note="Flavodoxin; Region: Flavodoxin_1; pfam00258"
/db_xref="CDD:215823"
misc_feature 19515..20591
/gene="cysJ"
/locus_tag="SARI_00014"
/note="Cytochrome p450- like alpha subunits of E. coli
sulfite reductase (SiR) multimerize with beta subunits to
catalyze the NADPH dependent reduction of sulfite to
sulfide. Beta subunits have an Fe4S4 cluster and a
siroheme, while the alpha subunits (cysJ...; Region: SiR;
cd06199"
/db_xref="CDD:99796"
misc_feature order(19617..19619,19950..19961,20004..20006,20010..20012,
20049..20060)
/gene="cysJ"
/locus_tag="SARI_00014"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99796"
misc_feature order(19950..19952,19956..19961)
/gene="cysJ"
/locus_tag="SARI_00014"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99796"
misc_feature order(19959..19961,20448..20450,20583..20585,20589..20591)
/gene="cysJ"
/locus_tag="SARI_00014"
/note="catalytic residues [active]"
/db_xref="CDD:99796"
misc_feature order(20010..20021,20172..20174,20178..20180,20259..20264,
20349..20354,20373..20375,20379..20381,20466..20468)
/gene="cysJ"
/locus_tag="SARI_00014"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99796"
misc_feature order(20049..20051,20058..20060,20067..20069)
/gene="cysJ"
/locus_tag="SARI_00014"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99796"
misc_feature order(20163..20165,20175..20186,20190..20192)
/gene="cysJ"
/locus_tag="SARI_00014"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99796"
gene 20594..22306
/locus_tag="SARI_00015"
/db_xref="GeneID:5760523"
CDS 20594..22306
/locus_tag="SARI_00015"
/inference="protein motif:HMMPfam:IPR005117"
/inference="protein motif:HMMPfam:IPR006067"
/inference="protein motif:HMMPIR:IPR008287"
/inference="protein motif:HMMTigr:IPR011786"
/inference="protein motif:ScanRegExp:IPR006066"
/inference="protein motif:superfamily:IPR011255"
/inference="similar to AA sequence:SwissProt:P17845"
/note="hemoprotein; NADPH dependent; with the alpha
subunit (a flavoprotein) catalyzes the reduction of
sulfite to sulfide"
/codon_start=1
/transl_table=11
/product="sulfite reductase subunit beta"
/protein_id="YP_001569111.1"
/db_xref="GI:161501999"
/db_xref="InterPro:IPR005117"
/db_xref="InterPro:IPR006066"
/db_xref="InterPro:IPR006067"
/db_xref="InterPro:IPR008287"
/db_xref="InterPro:IPR011255"
/db_xref="InterPro:IPR011786"
/db_xref="GeneID:5760523"
/translation="MSEKHPGPLVVEGKLSDAERMKRESNYLRGTIAEDLNDGLTGGF
KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQVIDKF
AADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
PYESQLHSEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
TVVIPPQNDIDLHANDMSFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGF
LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPI
RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKSGLLEIAKIHQGEFRI
TANQNLIVASVPESQKMKVEKLALDYGLMNAVSPQRENSMACVSFPTCPLAMAEAERF
LPSFVDKVEAVMAKHGVGNEHIVLRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGN
RIGSRIPRMYKENITEPAILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
DFWE"
misc_feature 20606..22300
/locus_tag="SARI_00015"
/note="sulfite reductase subunit beta; Provisional;
Region: PRK13504"
/db_xref="CDD:237402"
misc_feature 20837..21013
/locus_tag="SARI_00015"
/note="Nitrite/Sulfite reductase ferredoxin-like half
domain; Region: NIR_SIR_ferr; pfam03460"
/db_xref="CDD:217572"
misc_feature 21650..21847
/locus_tag="SARI_00015"
/note="Nitrite/Sulfite reductase ferredoxin-like half
domain; Region: NIR_SIR_ferr; pfam03460"
/db_xref="CDD:217572"
gene 22409..23143
/locus_tag="SARI_00016"
/db_xref="GeneID:5760524"
CDS 22409..23143
/locus_tag="SARI_00016"
/inference="protein motif:HMMPfam:IPR002500"
/inference="protein motif:HMMTigr:IPR004511"
/inference="protein motif:HMMTigr:IPR011800"
/inference="similar to AA sequence:INSD:"
/note="catalyzes the reduction of 3'-phosphoadenylyl
sulfate into sulfite"
/codon_start=1
/transl_table=11
/product="phosphoadenosine phosphosulfate reductase"
/protein_id="YP_001569112.1"
/db_xref="GI:161502000"
/db_xref="InterPro:IPR002500"
/db_xref="InterPro:IPR004511"
/db_xref="InterPro:IPR011800"
/db_xref="GeneID:5760524"
/translation="MSVLDLNALNDLPKVDRVLALAETNAELEKLVAEERVAWSLENL
PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDALTDKLKLNLK
VYRATESAAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALQDLNAQTWFAGLRREQ
SGSRTSLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWHQGYLSVGDTHTT
RKWEPGMAEEETRFFGLKRECGLHEG"
misc_feature 22430..23140
/locus_tag="SARI_00016"
/note="3'-phosphoadenosine 5'-phosphosulfate
sulfotransferase (PAPS reductase)/FAD synthetase and
related enzymes [Amino acid transport and metabolism /
Coenzyme metabolism]; Region: CysH; COG0175"
/db_xref="CDD:223253"
misc_feature 22553..23047
/locus_tag="SARI_00016"
/note="This domain is found in phosphoadenosine
phosphosulphate (PAPS) reductase enzymes or PAPS
sulphotransferase. PAPS reductase is part of the adenine
nucleotide alpha hydrolases superfamily also including N
type ATP PPases and ATP sulphurylases. A highly...;
Region: PAPS_reductase; cd01713"
/db_xref="CDD:238846"
misc_feature order(22814..22816,22898..22900,22940..22942)
/locus_tag="SARI_00016"
/note="Active Sites [active]"
/db_xref="CDD:238846"
gene complement(23241..24194)
/locus_tag="SARI_00017"
/db_xref="GeneID:5760525"
CDS complement(23241..24194)
/locus_tag="SARI_00017"
/inference="similar to AA sequence:INSD:AAO70403.1"
/note="'COG: NOG25864 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569113.1"
/db_xref="GI:161502001"
/db_xref="GeneID:5760525"
/translation="MPVTLNFGNYQNYTLNESRLAHLLSADKEKATHMGRWDKLQDHF
RSEKKDHALEVLHSIIHGQGRGEPGEMDVNVEDMAKIYAFKRLQNLACPAHQDLFKIK
MDASQTQFLFIVGDTVISQSKIQDILNISDTVAVESMSREERKLFLQICEMIGSTITC
HPELLQASSSTLRKEVTGNTKIKEAVYGMMRPAEAPDHQLVEWQDSLSENEKSTLACI
NAGNFDPITQFCKIGYQEIQGEVAFSMIHPCISYLLHTYSPLTEFKGTNAGFLNKLNQ
DYKDYHKNKMNIDPILEKIYLAHEHSLHIGKNECSRNILLA"
misc_feature complement(23244..24194)
/locus_tag="SARI_00017"
/note="pathogenicity island 1 effector protein SopD;
Provisional; Region: PRK15379"
/db_xref="CDD:185277"
gene 24531..24716
/locus_tag="SARI_00018"
/db_xref="GeneID:5760526"
CDS 24531..24716
/locus_tag="SARI_00018"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569114.1"
/db_xref="GI:161502002"
/db_xref="GeneID:5760526"
/translation="MFKYNFKMCNFFRYLKKALKRREVLSLSTCWSLRVDITIGESPG
GEKLTAAMIIIFFVGIV"
gene 24740..25495
/locus_tag="SARI_00019"
/db_xref="GeneID:5760527"
CDS 24740..25495
/locus_tag="SARI_00019"
/inference="similar to AA sequence:INSD:AAL21824.1"
/note="'COG: COG1203 Predicted helicases;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569115.1"
/db_xref="GI:161502003"
/db_xref="GeneID:5760527"
/translation="MVIDNIYFIDHHLKKLGIKNKEQTAQFFAWILFWHDIGKFAHSF
QQLYRHEALNAFNEPTRYYKKIAHPTLGYGLWNSWLSECPELFPPSSLSVRKSKRVMA
LWMPVTTGHHGRPPDAIQELDQFRQQDKDAARDFLLRVKALFPSTANVSVFTGIETLF
PFIQHPTLLQQKVLELDINMDGAQLFILEDVTGAGKTEAALILVHRLMAAGKAQGLYF
GLPTMAVTPFKHNNLRLLGLSNKVLLCSPRQRG"
misc_feature 24779..>25174
/locus_tag="SARI_00019"
/note="CRISPR/Cas system-associated protein Cas3'';
Region: Cas3''_I; cd09641"
/db_xref="CDD:193608"
gene complement(25575..26621)
/locus_tag="SARI_00020"
/db_xref="GeneID:5760528"
CDS complement(25575..26621)
/locus_tag="SARI_00020"
/inference="protein motif:HMMPfam:IPR007484"
/inference="similar to AA sequence:REFSEQ:NP_461857.1"
/note="catalyzes the sequential removal of 2
amino-terminal arginines from alkaline phosphatase isozyme
1 to form isozymes 2 and 3"
/codon_start=1
/transl_table=11
/product="alkaline phosphatase isozyme conversion
aminopeptidase"
/protein_id="YP_001569116.1"
/db_xref="GI:161502004"
/db_xref="InterPro:IPR007484"
/db_xref="GeneID:5760528"
/translation="MFSATRRFTVILALGVGFIFPAQAASPGPGEIANIQARHIATFF
PGRMTGSPAEMLTADYLRQQFARMGYQSDIRTFNSRFIYTTRDNRKNWHNVTGSMVIA
AHEGHVPQQIIIMAHLDTYAPQSDADIDANLGGLTLQGMDDNAAGLGVMLELAARLKD
IPTHYGIRFIATSGEEEGKLGAENLLKRMSDTEKKNTLLIINLDNLIVGDKLYFNSGK
NTPEAVRTLTRERALAIARHYGIAASTNPGLNPAYPKGTGCCNDAEVFDKAGLSVLSV
EATNWNLGKKDGYQQRAKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIM
LPLVKELAKAEKTP"
misc_feature complement(25584..26621)
/locus_tag="SARI_00020"
/note="alkaline phosphatase isozyme conversion
aminopeptidase; Provisional; Region: PRK10199"
/db_xref="CDD:182299"
misc_feature complement(25620..26513)
/locus_tag="SARI_00020"
/note="M28 Zn-peptidases include aminopeptidases and
carboxypeptidases; Region: M28; cd02690"
/db_xref="CDD:193493"
misc_feature complement(order(25707..25709,26010..26012,26094..26099,
26193..26195,26271..26273))
/locus_tag="SARI_00020"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193493"
gene 26873..27781
/locus_tag="SARI_00021"
/db_xref="GeneID:5760529"
CDS 26873..27781
/locus_tag="SARI_00021"
/inference="protein motif:HMMPfam:IPR002500"
/inference="protein motif:HMMTigr:IPR011784"
/inference="similar to AA sequence:SwissProt:P65672"
/note="with CysN catalyzes the formation of
adenylylsulfate from sulfate and ATP"
/codon_start=1
/transl_table=11
/product="sulfate adenylyltransferase subunit 2"
/protein_id="YP_001569117.1"
/db_xref="GI:161502005"
/db_xref="InterPro:IPR002500"
/db_xref="InterPro:IPR011784"
/db_xref="GeneID:5760529"
/translation="MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVML
HLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANTYGCELLVHKNPEGVAMDINP
FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
KNQRPELWRNYNGQINTGESIRVFPLSNWTEQDIWQYIWLENIEIVPLYLAAERPVLE
RDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVST
TSERQGRVIDRDQAGSMELKKRQGYF"
misc_feature 26897..27778
/locus_tag="SARI_00021"
/note="sulfate adenylyltransferase, small subunit; Region:
CysD; TIGR02039"
/db_xref="CDD:131094"
misc_feature 26957..27499
/locus_tag="SARI_00021"
/note="This domain is found in phosphoadenosine
phosphosulphate (PAPS) reductase enzymes or PAPS
sulphotransferase. PAPS reductase is part of the adenine
nucleotide alpha hydrolases superfamily also including N
type ATP PPases and ATP sulphurylases. A highly...;
Region: PAPS_reductase; cd01713"
/db_xref="CDD:238846"
misc_feature order(27215..27217,27299..27301,27404..27406,27416..27418)
/locus_tag="SARI_00021"
/note="Active Sites [active]"
/db_xref="CDD:238846"
gene 27791..29230
/gene="cysN"
/locus_tag="SARI_00022"
/db_xref="GeneID:5760530"
CDS 27791..29230
/gene="cysN"
/locus_tag="SARI_00022"
/inference="protein motif:HMMPfam:IPR000795"
/inference="protein motif:HMMPfam:IPR004161"
/inference="protein motif:HMMTigr:IPR005225"
/inference="protein motif:HMMTigr:IPR011779"
/inference="protein motif:ScanRegExp:IPR000795"
/inference="protein motif:superfamily:IPR009001"
/inference="similar to AA sequence:REFSEQ:NP_461855.1"
/note="may be GTPase that regulates ATP sulfurylase
activity that is involved in converting ATP and sulfate to
diphosphate and adenylylsulfate; in Escherichia coli this
enzyme functions in cysteine biosynthesis in the first
step; forms a heterodimer with CysD; part of the
GTP-binding elongation factor family CysN/NodQ"
/codon_start=1
/transl_table=11
/product="sulfate adenylyltransferase subunit 1"
/protein_id="YP_001569118.1"
/db_xref="GI:161502006"
/db_xref="InterPro:IPR000795"
/db_xref="InterPro:IPR004161"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR009001"
/db_xref="InterPro:IPR011779"
/db_xref="GeneID:5760530"
/translation="MNTILAQQIAKEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
STEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGI
KHLVVAINKMDLVDYREETFARIREDYLTFAERLPGDLDIRFVPLSALEGDNVAAQSA
NMRWYSGPTLLEVLETVDIQRVVDRQPMRFPVQYVNRPNLDFRGYVGTLASGSIKVGE
RIKVLPSGVESSVSRIVTFDGDREEAYAGEAITLVLNDEIDISRGDLLLAANEALAPA
QYAAIDVVWMAEQPLTPGQSYDVKLAGKKTRARVETIRYQIDINNLTQRDVESLPLNG
IGLVEMAFDEPLALDIYQQNPVTGGLIFIDRLSNITVGAGMVREPVERGVTPPMEYSA
FELELNALVRRHFPHWNARDLLGDKHGAA"
misc_feature 27791..29209
/gene="cysN"
/locus_tag="SARI_00022"
/note="sulfate adenylyltransferase subunit 1; Provisional;
Region: cysN; PRK05124"
/db_xref="CDD:235349"
misc_feature 27875..28507
/gene="cysN"
/locus_tag="SARI_00022"
/note="CysN, together with protein CysD, forms the ATP
sulfurylase (ATPS) complex; Region: CysN_ATPS; cd04166"
/db_xref="CDD:206729"
misc_feature order(27875..27877,28076..28081,28085..28087,28091..28093,
28112..28114,28118..28120,28166..28168,28175..28177)
/gene="cysN"
/locus_tag="SARI_00022"
/note="CysD dimerization site [polypeptide binding]; other
site"
/db_xref="CDD:206729"
misc_feature 27890..27913
/gene="cysN"
/locus_tag="SARI_00022"
/note="G1 box; other site"
/db_xref="CDD:206729"
misc_feature order(27893..27895,27899..27901,27911..27916,27923..27925,
27932..27937,28082..28087,28139..28144,28211..28216,
28334..28336,28346..28348)
/gene="cysN"
/locus_tag="SARI_00022"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206729"
misc_feature order(27899..27901,27905..27916,28046..28048,28292..28297,
28301..28306,28406..28414)
/gene="cysN"
/locus_tag="SARI_00022"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206729"
misc_feature 28052..28084
/gene="cysN"
/locus_tag="SARI_00022"
/note="Switch I region; other site"
/db_xref="CDD:206729"
misc_feature 28070..28072
/gene="cysN"
/locus_tag="SARI_00022"
/note="G2 box; other site"
/db_xref="CDD:206729"
misc_feature 28127..28138
/gene="cysN"
/locus_tag="SARI_00022"
/note="G3 box; other site"
/db_xref="CDD:206729"
misc_feature 28133..28189
/gene="cysN"
/locus_tag="SARI_00022"
/note="Switch II region; other site"
/db_xref="CDD:206729"
misc_feature 28292..28303
/gene="cysN"
/locus_tag="SARI_00022"
/note="G4 box; other site"
/db_xref="CDD:206729"
misc_feature 28406..28414
/gene="cysN"
/locus_tag="SARI_00022"
/note="G5 box; other site"
/db_xref="CDD:206729"
misc_feature 28529..28756
/gene="cysN"
/locus_tag="SARI_00022"
/note="CysN_NodQ_II: This subfamily represents the domain
II of the large subunit of ATP sulfurylase (ATPS): CysN or
the N-terminal portion of NodQ, found mainly in
proteobacteria and homologous to the domain II of EF-Tu.
Escherichia coli ATPS consists of CysN...; Region:
CysN_NodQ_II; cd03695"
/db_xref="CDD:239666"
misc_feature 28808..29092
/gene="cysN"
/locus_tag="SARI_00022"
/note="TCysN_NoDQ_II: This subfamily represents the domain
II of the large subunit of ATP sulfurylase (ATPS): CysN or
the N-terminal portion of NodQ, found mainly in
proteobacteria and homologous to the domain II of EF-Tu.
Escherichia coli ATPS consists of CysN...; Region:
CysN_NoDQ_III; cd04095"
/db_xref="CDD:239762"
gene 29217..29822
/locus_tag="SARI_00023"
/db_xref="GeneID:5760531"
CDS 29217..29822
/locus_tag="SARI_00023"
/inference="protein motif:BlastProDom:IPR002891"
/inference="protein motif:HMMPfam:IPR002891"
/inference="protein motif:HMMTigr:IPR002891"
/inference="similar to AA sequence:REFSEQ:YP_217852.1"
/note="converts ATP and adenylyl sulfate to ADP and
3'-phosphoadenylyl sulfate; in Escherichia coli this
enzyme functions in cysteine biosynthesis"
/codon_start=1
/transl_table=11
/product="adenylylsulfate kinase"
/protein_id="YP_001569119.1"
/db_xref="GI:161502007"
/db_xref="InterPro:IPR002891"
/db_xref="GeneID:5760531"
/translation="MALHDENVVWHPHPVTVTAREQLHGHRGVVLWFTGLSGSGKSTV
AGALEEALHHRSVSTYLLDGDNVRHGLCRNLGFSDADRKENIRRVGEVASLMADAGLI
VLTAFISPHRAERQLVQERVGHDRFIEIYVDTPLAVCEQRDPKGLYKKARAGELRNFT
GIDGIYEAPESPQIHLNGEQLVTNLVSQLLDLLRRRDIISS"
misc_feature 29304..29747
/locus_tag="SARI_00023"
/note="Adenosine 5'-phosphosulfate kinase (APSK) catalyzes
the phosphorylation of adenosine 5'-phosphosulfate to form
3'-phosphoadenosine 5'-phosphosulfate (PAPS). The
end-product PAPS is a biologically 'activated' sulfate
form...; Region: APSK; cd02027"
/db_xref="CDD:238985"
misc_feature order(29325..29330,29334..29345,29418..29420,29445..29447,
29460..29462,29469..29471,29538..29546,29640..29642,
29691..29696)
/locus_tag="SARI_00023"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:238985"
gene 29840..30196
/locus_tag="SARI_00024"
/db_xref="GeneID:5760532"
CDS 29840..30196
/locus_tag="SARI_00024"
/inference="similar to AA sequence:REFSEQ:NP_457321.1"
/note="'COG: NOG12170 non supervised orthologous group;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569120.1"
/db_xref="GI:161502008"
/db_xref="GeneID:5760532"
/translation="MPGMVKVTGFDMRNSHNITFTRSDAFIVDDDTTSSLPGAVVGFV
SWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKLLFSIMFTL
LAVGALFGALFIWLLG"
misc_feature 29873..30193
/locus_tag="SARI_00024"
/note="Protein of unknown function (DUF3561); Region:
DUF3561; pfam12084"
/db_xref="CDD:152519"
gene 30387..30698
/gene="ftsB"
/locus_tag="SARI_00025"
/db_xref="GeneID:5760533"
CDS 30387..30698
/gene="ftsB"
/locus_tag="SARI_00025"
/inference="protein motif:HMMPfam:IPR007060"
/inference="similar to AA sequence:REFSEQ:ZP_00696532.1"
/note="forms a complex with FtsL and FtsQ; colocalizes to
the septal region of the dividing cell; membrane protein"
/codon_start=1
/transl_table=11
/product="cell division protein FtsB"
/protein_id="YP_001569121.1"
/db_xref="GI:161502009"
/db_xref="InterPro:IPR007060"
/db_xref="GeneID:5760533"
/translation="MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNA
KLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAQTAGQNN
R"
misc_feature 30387..30695
/gene="ftsB"
/locus_tag="SARI_00025"
/note="cell division protein FtsB; Reviewed; Region: ftsB;
PRK00888"
/db_xref="CDD:179156"
misc_feature <30444..30668
/gene="ftsB"
/locus_tag="SARI_00025"
/note="Septum formation initiator [Cell division and
chromosome partitioning]; Region: COG2919"
/db_xref="CDD:225471"
gene 30717..31427
/gene="ispD"
/locus_tag="SARI_00026"
/db_xref="GeneID:5760534"
CDS 30717..31427
/gene="ispD"
/locus_tag="SARI_00026"
/inference="protein motif:HMMPfam:IPR001228"
/inference="protein motif:HMMPIR:IPR008233"
/inference="protein motif:HMMTigr:IPR001228"
/inference="protein motif:ScanRegExp:IPR001228"
/inference="similar to AA sequence:REFSEQ:NP_806528.1"
/note="4-diphosphocytidyl-2C-methyl-D-erythritol synthase;
MEP cytidylyltransferase; MCT; catalyzes the formation of
4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and
2-C-methyl-D-erythritol 4-phosphate; involved in
isoprenoid and isopentenyl-PP biosynthesis; forms
homodimers"
/codon_start=1
/transl_table=11
/product="2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase"
/protein_id="YP_001569122.1"
/db_xref="GI:161502010"
/db_xref="InterPro:IPR001228"
/db_xref="InterPro:IPR008233"
/db_xref="GeneID:5760534"
/translation="MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHA
LLAHPRVTRVVIVISPGDHRFAQLPLANHPQITVVDGGNERADSVMAGLQAVAQAKWV
LVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKAAIAHTVERADL
WHALTPQFFPRELLHDCLTRALKEGATITDEASALEYCGFHPALVEGRADNIKVTRPE
DLALAEFYLTRTIHQEKA"
misc_feature 30738..31385
/gene="ispD"
/locus_tag="SARI_00026"
/note="CDP-ME synthetase is involved in
mevalonate-independent isoprenoid production; Region:
CDP-ME_synthetase; cd02516"
/db_xref="CDD:133009"
misc_feature order(30753..30755,30759..30776,30795..30797,30960..30971,
30978..30980,31032..31040,31353..31355)
/gene="ispD"
/locus_tag="SARI_00026"
/note="substrate binding site; other site"
/db_xref="CDD:133009"
misc_feature order(31041..31043,31101..31103,31125..31127,31131..31133,
31188..31205,31281..31286,31290..31295,31302..31304,
31317..31328,31338..31343)
/gene="ispD"
/locus_tag="SARI_00026"
/note="dimer interface; other site"
/db_xref="CDD:133009"
gene 31427..31906
/gene="ispF"
/locus_tag="SARI_00027"
/db_xref="GeneID:5760535"
CDS 31427..31906
/gene="ispF"
/locus_tag="SARI_00027"
/inference="protein motif:HMMPfam:IPR003526"
/inference="protein motif:HMMPIR:IPR010925"
/inference="protein motif:HMMTigr:IPR003526"
/inference="protein motif:ScanRegExp:IPR003526"
/inference="protein motif:superfamily:IPR003526"
/inference="similar to AA sequence:INSD:AAV78640.1"
/note="'catalyzes the conversion of
4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate
into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate'"
/codon_start=1
/transl_table=11
/product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
synthase"
/protein_id="YP_001569123.1"
/db_xref="GI:161502011"
/db_xref="InterPro:IPR003526"
/db_xref="InterPro:IPR010925"
/db_xref="GeneID:5760535"
/translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYILGNVDVTIIAQA
PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGITCEAVALLMKAAK"
misc_feature 31430..31888
/gene="ispF"
/locus_tag="SARI_00027"
/note="MECDP_synthase
(2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase),
encoded by the ispF gene, catalyzes the formation of
2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEC) in the
non-mevalonate deoxyxylulose (DOXP) pathway for isoprenoid
biosynthesis; Region: MECDP_synthase; cd00554"
/db_xref="CDD:100025"
misc_feature order(31430..31435,31439..31441,31445..31447,31451..31459,
31469..31471,31574..31576,31580..31585,31589..31594,
31703..31705,31709..31711,31715..31717,31736..31738,
31742..31744,31808..31810,31814..31819,31826..31834,
31871..31873,31877..31879,31883..31885)
/gene="ispF"
/locus_tag="SARI_00027"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100025"
misc_feature order(31448..31450,31454..31456,31550..31552)
/gene="ispF"
/locus_tag="SARI_00027"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:100025"
misc_feature order(31592..31594,31598..31600,31724..31729,31733..31744,
31817..31825)
/gene="ispF"
/locus_tag="SARI_00027"
/note="CDP-binding sites; other site"
/db_xref="CDD:100025"
gene 31903..32952
/gene="truD"
/locus_tag="SARI_00028"
/db_xref="GeneID:5760536"
CDS 31903..32952
/gene="truD"
/locus_tag="SARI_00028"
/inference="protein motif:HMMPfam:IPR001656"
/inference="protein motif:HMMTigr:IPR001656"
/inference="protein motif:ScanRegExp:IPR001656"
/inference="similar to AA sequence:INSD:AAV78639.1"
/note="catalyzes the modification of U13 in tRNA(Glu)"
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine synthase D"
/protein_id="YP_001569124.1"
/db_xref="GI:161502012"
/db_xref="InterPro:IPR001656"
/db_xref="GeneID:5760536"
/translation="MTEFENLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHI
LVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFS
AFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDSGVPNYF
GAQRFGIGGSNLQGALRWAQSDAPVRDRNKRSFWLSAARSALFNQIVSQRLKKTDFNQ
VVDGDTLQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGRGEWGTQRDALAFEQ
DAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVV
RELINTIGDYAHIAE"
misc_feature 31903..32922
/gene="truD"
/locus_tag="SARI_00028"
/note="tRNA pseudouridine synthase D; Reviewed; Region:
truD; PRK00984"
/db_xref="CDD:234884"
misc_feature 31954..32682
/gene="truD"
/locus_tag="SARI_00028"
/note="Pseudouridine synthase, similar to Escherichia coli
TruD; Region: PseudoU_synth_EcTruD; cd02575"
/db_xref="CDD:211340"
misc_feature 31981..32001
/gene="truD"
/locus_tag="SARI_00028"
/note="Permutation of conserved domain; other site"
/db_xref="CDD:211340"
misc_feature 32131..32142
/gene="truD"
/locus_tag="SARI_00028"
/note="active site"
/db_xref="CDD:211340"
misc_feature <32836..32916
/gene="truD"
/locus_tag="SARI_00028"
/note="Pseudouridine synthases catalyze the isomerization
of specific uridines in an RNA molecule to pseudouridines
(5-ribosyluracil, psi); Region: PseudoU_synth; cl00130"
/db_xref="CDD:241628"
gene 32933..33694
/gene="surE"
/locus_tag="SARI_00029"
/db_xref="GeneID:5762022"
CDS 32933..33694
/gene="surE"
/locus_tag="SARI_00029"
/inference="protein motif:BlastProDom:IPR002828"
/inference="protein motif:HMMPfam:IPR002828"
/inference="protein motif:HMMTigr:IPR002828"
/inference="similar to AA sequence:SwissProt:P66881"
/note="catalyzes the conversion of a phosphate monoester
to an alcohol and a phosphate"
/codon_start=1
/transl_table=11
/product="stationary phase survival protein SurE"
/protein_id="YP_001569125.1"
/db_xref="GI:161502013"
/db_xref="InterPro:IPR002828"
/db_xref="GeneID:5762022"
/translation="MRILLSNDDGIHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
LTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
YSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNV
PDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVD
EGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW"
misc_feature 32933..33667
/gene="surE"
/locus_tag="SARI_00029"
/note="5'(3')-nucleotidase/polyphosphatase; Provisional;
Region: surE; PRK00346"
/db_xref="CDD:234732"
gene 33688..34314
/gene="pcm"
/locus_tag="SARI_00030"
/db_xref="GeneID:5762023"
CDS 33688..34314
/gene="pcm"
/locus_tag="SARI_00030"
/inference="protein motif:HMMPanther:IPR000682"
/inference="protein motif:HMMPfam:IPR000682"
/inference="protein motif:HMMTigr:IPR000682"
/inference="protein motif:ScanRegExp:IPR000682"
/inference="similar to AA sequence:REFSEQ:NP_461847.1"
/note="catalyzes the methyl esterification of
L-isoaspartyl residues that are formed in damaged
proteins"
/codon_start=1
/transl_table=11
/product="protein-L-isoaspartate O-methyltransferase"
/protein_id="YP_001569126.1"
/db_xref="GI:161502014"
/db_xref="InterPro:IPR000682"
/db_xref="GeneID:5762023"
/translation="MVSRRVQALLEQLRAQGIRDEQVLDALAAVPREKFIDEAFEHKA
WENIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVHHVCS
VERIKGLQWQARRRLKQLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMA
QLDEGGILVLPVGDEQQFLKRVRRRGGEFIIDTVEAVRFVPLVRGELA"
misc_feature 33688..34311
/gene="pcm"
/locus_tag="SARI_00030"
/note="protein-L-isoaspartate O-methyltransferase;
Reviewed; Region: pcm; PRK00312"
/db_xref="CDD:178974"
misc_feature 33919..34203
/gene="pcm"
/locus_tag="SARI_00030"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(33931..33951,33997..34002,34075..34083,34129..34131)
/gene="pcm"
/locus_tag="SARI_00030"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(34454..34651)
/locus_tag="SARI_00031"
/db_xref="GeneID:5762024"
CDS complement(34454..34651)
/locus_tag="SARI_00031"
/inference="similar to AA sequence:REFSEQ:YP_542096.1"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569127.1"
/db_xref="GI:161502015"
/db_xref="GeneID:5762024"
/translation="MINIPELVFDDKPPSTDETGAGGFDELEQPASHSETSDSAAMRL
TVNFGLPALIYPPGKNLVNSQ"
gene 34491..35612
/gene="nlpD"
/locus_tag="SARI_00032"
/db_xref="GeneID:5762025"
CDS 34491..35612
/gene="nlpD"
/locus_tag="SARI_00032"
/inference="protein motif:HMMPfam:IPR002482"
/inference="protein motif:HMMPfam:IPR002886"
/inference="protein motif:HMMSmart:IPR002482"
/inference="protein motif:superfamily:IPR011054"
/inference="similar to AA sequence:REFSEQ:YP_217844.1"
/note="outer membrane lipoprotein involved in
stationary-phase cell survival; similar to LppB virulence
determinant from Haemophilus somnus"
/codon_start=1
/transl_table=11
/product="lipoprotein NlpD"
/protein_id="YP_001569128.2"
/db_xref="GI:448236175"
/db_xref="InterPro:IPR002482"
/db_xref="InterPro:IPR002886"
/db_xref="InterPro:IPR011054"
/db_xref="GeneID:5762025"
/translation="MSAGSPKFTVSRIAALSLVSLWLAGCSSSSNPPAPVSSVDGGLS
SNTNSGMLITPPPKMGATTQQAPQIQPVQRPVTQPVQTQPVAEQPVQMENGRIVYNRQ
YGNIPKGSYAGGSTYTVKKGDTLFYIAWITGNDFRDLAQRNSIPAPYSLNVGQILQVG
NASGTPITGGNAITQADAAQQGVVTRSAQNSTVAVASQPTITYSEGSGEQSANKMLPN
NKPAGTVVTAPVTAPTVSTTEPNASSTSTSAPISAWRWPTDGKVIENFGASEGGNKGI
DIAGSKGQAIVATANGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEV
KAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR"
misc_feature 34491..35609
/gene="nlpD"
/locus_tag="SARI_00032"
/note="lipoprotein NlpD; Provisional; Region: nlpD;
PRK10871"
/db_xref="CDD:236782"
misc_feature 34836..34967
/gene="nlpD"
/locus_tag="SARI_00032"
/note="Lysine Motif is a small domain involved in binding
peptidoglycan; Region: LysM; cd00118"
/db_xref="CDD:212030"
misc_feature 35301..35588
/gene="nlpD"
/locus_tag="SARI_00032"
/note="Peptidase family M23; Region: Peptidase_M23;
pfam01551"
/db_xref="CDD:216566"
gene 35676..36668
/locus_tag="SARI_00033"
/db_xref="GeneID:5762026"
CDS 35676..36668
/locus_tag="SARI_00033"
/inference="protein motif:FPrintScan:IPR000943"
/inference="protein motif:HMMPfam:IPR007624"
/inference="protein motif:HMMPfam:IPR007627"
/inference="protein motif:HMMPfam:IPR007630"
/inference="protein motif:HMMPfam:IPR009042"
/inference="protein motif:HMMTigr:IPR012761"
/inference="protein motif:ScanRegExp:IPR000943"
/inference="protein motif:superfamily:IPR013324"
/inference="protein motif:superfamily:IPR013325"
/inference="similar to AA sequence:INSD:CAD06030.1"
/note="sigma factors are initiation factors that promote
the attachment of RNA polymerase to specific initiation
sites and are then released; this sigma factor controls a
regulon of genes required for protection against external
stresses"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma factor RpoS"
/protein_id="YP_001569129.1"
/db_xref="GI:161502017"
/db_xref="InterPro:IPR000943"
/db_xref="InterPro:IPR007624"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR009042"
/db_xref="InterPro:IPR012761"
/db_xref="InterPro:IPR013324"
/db_xref="InterPro:IPR013325"
/db_xref="GeneID:5762026"
/translation="MSQNTLKVHDLNEDAEFDENGVEAFDEKALSEEEPSDNDLAEEE
LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFSFSTYATWWIRQTIERAIMN
QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
misc_feature 35685..36659
/locus_tag="SARI_00033"
/note="RNA polymerase sigma factor RpoS; Validated;
Region: PRK05657"
/db_xref="CDD:235548"
misc_feature 35841..35948
/locus_tag="SARI_00033"
/note="Sigma-70 factor, region 1.2; Region: Sigma70_r1_2;
pfam00140"
/db_xref="CDD:201030"
misc_feature 35955..36167
/locus_tag="SARI_00033"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:218138"
misc_feature 36192..36425
/locus_tag="SARI_00033"
/note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539"
/db_xref="CDD:146934"
misc_feature 36441..36617
/locus_tag="SARI_00033"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(36474..36476,36504..36506,36534..36539,36567..36569,
36573..36578,36582..36590,36594..36599,36603..36605)
/locus_tag="SARI_00033"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene complement(36715..36951)
/locus_tag="SARI_00034"
/db_xref="GeneID:5762027"
CDS complement(36715..36951)
/locus_tag="SARI_00034"
/inference="similar to AA sequence:REFSEQ:NP_457312.1"
/note="'COG: NOG14130 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569130.1"
/db_xref="GI:161502018"
/db_xref="GeneID:5762027"
/translation="MICPRCADEHIELMATSPVKGVWTVYQCQHCLYTWRDTEPLRRT
SREHYPQAFRMTQKDIDNAPMVPSIPPLLAEDKR"
misc_feature complement(<36847..36945)
/locus_tag="SARI_00034"
/note="Protein of unknown function (DUF1062); Region:
DUF1062; cl01786"
/db_xref="CDD:242707"
gene complement(36962..38389)
/locus_tag="SARI_00035"
/db_xref="GeneID:5762028"
CDS complement(36962..38389)
/locus_tag="SARI_00035"
/inference="protein motif:HMMPfam:IPR002830"
/inference="protein motif:HMMTigr:IPR002830"
/inference="similar to AA sequence:REFSEQ:NP_461843.1"
/note="'KEGG: gvi:gll3010 3.8e-52
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD K03182;
COG: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase
and related decarboxylases;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569131.1"
/db_xref="GI:161502019"
/db_xref="InterPro:IPR002830"
/db_xref="GeneID:5762028"
/translation="MAFDDLRSFLHALDQQGQLLKISEEVNAEPDLAAAANATGRIGD
GAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLPPNTPVKKQIDEFIRRWDNFPVA
PERRANPGWAENTVDGDAINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQ
NVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATP
LKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFT
DHYSGGRNMTVVRIDKVSYRSKPIFESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFP
EVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFN
LPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHY
SQPVSDLPETKAWAEKLTAMLANRK"
misc_feature complement(36980..38389)
/locus_tag="SARI_00035"
/note="3-polyprenyl-4-hydroxybenzoate decarboxylase and
related decarboxylases [Coenzyme metabolism]; Region:
UbiD; COG0043"
/db_xref="CDD:223121"
gene complement(38389..38982)
/locus_tag="SARI_00036"
/db_xref="GeneID:5762029"
CDS complement(38389..38982)
/locus_tag="SARI_00036"
/inference="protein motif:Gene3D:IPR003382"
/inference="protein motif:HMMPfam:IPR003382"
/inference="protein motif:HMMTigr:IPR004507"
/inference="protein motif:superfamily:IPR003382"
/inference="similar to AA sequence:REFSEQ:YP_217838.1"
/note="'KEGG: sec:SC2851 1.2e-96 pad; putative
flavoprotein K03186;
COG: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase;
Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569132.1"
/db_xref="GI:161502020"
/db_xref="InterPro:IPR003382"
/db_xref="InterPro:IPR004507"
/db_xref="GeneID:5762029"
/translation="MRLIVGMTGATGAPLGVALLQALRTIPNVETHLVMSKWAKTTIE
LETPYTSMEVAALADYCHSPADQAATISSGSFRTDGMIIIPCSMKTLAGIRSGYAEGL
VGRAADVVLKEGRKLVLVPREMPLSTIHLENMLTLSHMGVAIVPPMPAFYNLPQTVDD
IIQHIVARVLDQFGLEHTRARRWQGLRQAANFSQENG"
misc_feature complement(38419..38982)
/locus_tag="SARI_00036"
/note="3-polyprenyl-4-hydroxybenzoate decarboxylase
[Coenzyme metabolism]; Region: UbiX; COG0163"
/db_xref="CDD:223241"
misc_feature complement(38593..38982)
/locus_tag="SARI_00036"
/note="Flavoprotein; Region: Flavoprotein; pfam02441"
/db_xref="CDD:217035"
gene 39119..39556
/locus_tag="SARI_00037"
/db_xref="GeneID:5762030"
CDS 39119..39556
/locus_tag="SARI_00037"
/inference="protein motif:Gene3D:IPR011991"
/inference="protein motif:HMMPfam:IPR000835"
/inference="protein motif:HMMSmart:IPR000835"
/inference="protein motif:ScanRegExp:IPR000835"
/inference="similar to AA sequence:INSD:AAX66756.1"
/note="'COG: COG1846 Transcriptional regulators;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569133.1"
/db_xref="GI:161502021"
/db_xref="InterPro:IPR000835"
/db_xref="InterPro:IPR011991"
/db_xref="GeneID:5762030"
/translation="MIEKVNLSGVIMELRNTAFHLLRQLFQQHTARWQHELPELTKPQ
YAVMRAIAEHSGIEQVDLTEAAVCTKATLAEMLSRMENRGLVKRENDPLDKRRRFVYL
TAQGRALLAAAIPLGDRVDDEFLGRLSDEEREQFAQLVRKMMA"
misc_feature 39161..39511
/locus_tag="SARI_00037"
/note="MarR family; Region: MarR_2; cl17246"
/db_xref="CDD:247800"
misc_feature 39179..39553
/locus_tag="SARI_00037"
/note="Transcriptional regulators [Transcription]; Region:
MarR; COG1846"
/db_xref="CDD:224759"
gene complement(39575..40297)
/locus_tag="SARI_00038"
/note="Pseudogene based on alignment with
gi|16766225|ref|NP_461840.1|"
/pseudogene="unknown"
/db_xref="GeneID:5762031"
gene complement(40680..41591)
/locus_tag="SARI_00039"
/db_xref="GeneID:5762032"
CDS complement(40680..41591)
/locus_tag="SARI_00039"
/inference="protein motif:Gene3D:IPR011991"
/inference="protein motif:HMMPfam:IPR000847"
/inference="protein motif:HMMPfam:IPR005119"
/inference="similar to AA sequence:INSD:CAD06018.1"
/note="'KEGG: shn:Shewana3_3435 1.1e-07 transcriptional
regulator, LysR family K06022;
COG: COG0583 Transcriptional regulator;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_001569134.2"
/db_xref="GI:448236176"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="InterPro:IPR011991"
/db_xref="GeneID:5762032"
/translation="MLNLQRMSLFVAVVDSGSFTAAAAVSGQTKAVVSFNIRQLEKEL
GVTLLLRSTRRLTLTDAGVLFYQKGVNLLNAAKNLQDEVRASHSGLGGELRITTTSEF
GEQVVIPVLAQFSQRHPDLRIRHMSSSHHADLIAERFDVAIRLGSLADSRYRATLISR
FTILPVASPQWLARYPVSSLESLAQAEWIIHERLSTPLRWTLTDNDGQHSRLEISKAG
RISVDSARSLMAFALAGSGVALLPEWLVKTALEDGALVHVLPDYHFPRQGIYAVYPDT
RHVSTKVRAFIDFLRSQWNCGEHAPSS"
misc_feature complement(40713..41588)
/locus_tag="SARI_00039"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:223656"
misc_feature complement(41406..41582)
/locus_tag="SARI_00039"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:215735"
misc_feature complement(40722..41318)
/locus_tag="SARI_00039"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulator CrgA and its related
homologs, contains the type 2 periplasmic binding domain;
Region: PBP2_CrgA_like; cd08422"
/db_xref="CDD:176114"
misc_feature complement(order(40785..40787,40866..40868,40917..40919,
41109..41111,41115..41117,41157..41159,41274..41276,
41286..41288))
/locus_tag="SARI_00039"
/note="putative effector binding pocket; other site"
/db_xref="CDD:176114"
misc_feature complement(order(40890..40892,40899..40904,40923..40937,
41031..41033,41211..41231,41235..41237,41247..41249,
41256..41261,41265..41270,41280..41285))
/locus_tag="SARI_00039"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176114"
gene 41700..42908
/locus_tag="SARI_00040"
/db_xref="GeneID:5762033"
CDS 41700..42908
/locus_tag="SARI_00040"
/inference="protein motif:HMMPfam:IPR011701"
/inference="protein motif:ScanRegExp:IPR005829"
/inference="similar to AA sequence:REFSEQ:YP_151935.1"
/note="'KEGG: ani:AN1180.2 2.4e-05 hypothetical protein
K04428;
COG: COG0477 Permeases of the major facilitator
superfamily;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569135.2"
/db_xref="GI:448236177"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:5762033"
/translation="MTYRSKVAVVYLLGFFLDLINLFIASVAFPAMSVDLHTSISALA
WVSNGYIAGLTLSVPFSAFFSRYLGARRLIMFSLILFSVAAAAAGFADSLYGLVFWRI
VQGAGGGLLIPVGQALTWQQFKPHERAGVSSVVMMVALLAPACSPAIGGLLVETCGWR
WIFFATLPVAIITLLLAYLWLNADSTTVASARLLHLPLLADRLLRFAMIVYQCVPGMF
IGISVVGMFYLQNVAQLSPAAAGSLMLPWSIASFVAIMLTGRYFNWLGPRPLIIVGCL
LQAAGILLLTHVTPATSHRVLMVIFALMGAGGSLCSSTAQSSAFLTIARQEMPDASAL
WNLNRQLSFFIGATLLTMLLNALQRVLSLEAAYRWTFIAAAIITLLPLIDAVCLNNRK
VLLYLKKERP"
misc_feature 41724..42770
/locus_tag="SARI_00040"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 41727..42740
/locus_tag="SARI_00040"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:219516"
misc_feature order(41763..41765,41772..41780,41784..41789,41838..41840,
41847..41852,41859..41861,41871..41876,41880..41885,
42021..42026,42033..42038,42045..42050,42057..42059,
42093..42098,42105..42110,42126..42128,42342..42344,
42351..42356,42363..42368,42375..42377,42417..42419,
42429..42431,42441..42443,42450..42452,42462..42464,
42612..42614,42621..42626,42633..42635,42645..42650,
42657..42659,42690..42695,42702..42707,42714..42719,
42726..42728)
/locus_tag="SARI_00040"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 42905..43285
/locus_tag="SARI_00041"
/db_xref="GeneID:5762034"
CDS 42905..43285
/locus_tag="SARI_00041"
/inference="similar to AA sequence:INSD:AAL21790.1"
/note="'COG: COG4460 Uncharacterized protein conserved in
bacteria;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569136.1"
/db_xref="GI:161502024"
/db_xref="GeneID:5762034"
/translation="MNSYKEEILHTHVAIENWLSRGAGSLEALLQRFAADFSMVTPGG
ACLDYPALGAFFQAQRACRPGLVIVVEHIDLVAEWPEGAALRYRERQQLPGQAETVRW
STVILKRERGRIVWRHLHETTVTA"
misc_feature 42905..43282
/locus_tag="SARI_00041"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4460"
/db_xref="CDD:226867"
gene complement(43341..45923)
/locus_tag="SARI_00042"
/db_xref="GeneID:5762035"
CDS complement(43341..45923)
/locus_tag="SARI_00042"
/inference="protein motif:BlastProDom:IPR000432"
/inference="protein motif:HMMPfam:IPR000432"
/inference="protein motif:HMMPfam:IPR007695"
/inference="protein motif:HMMPfam:IPR007696"
/inference="protein motif:HMMPfam:IPR007860"
/inference="protein motif:HMMPfam:IPR007861"
/inference="protein motif:HMMSmart:IPR000432"
/inference="protein motif:HMMSmart:IPR007696"
/inference="protein motif:HMMTigr:IPR005748"
/inference="protein motif:ScanRegExp:IPR000432"
/note="This protein performs the mismatch recognition step
during the DNA repair process"
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein MutS"
/protein_id="YP_001569137.1"
/db_xref="GI:161502025"
/db_xref="InterPro:IPR000432"
/db_xref="InterPro:IPR005748"
/db_xref="InterPro:IPR007695"
/db_xref="InterPro:IPR007696"
/db_xref="InterPro:IPR007860"
/db_xref="InterPro:IPR007861"
/db_xref="GeneID:5762035"
/translation="MSKINMNEDIDKDFSSHTPMMQQYLKLKAQHPEILLFYRMGDFY
ELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQ
IGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSG
RFRLSEPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQ
QLNLQFGTRDLVGFGVENASRGLCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIM
DAATRRNLEITQNLAGGIENTLAAVLDCTVTPMGSRMLKRWLHMPIRNTDILRERQQT
IGALQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELHAQLETV
DSAPVQALRKKMGDFAELRDLLERAIIDAPPVLVRDGGVIAPGYHQELDEWRALADGA
TDYLDRLEIRERERTGLDTLKVGYNAVHGYYIQISRGQSHLAPINYVRRQTLKNAERY
IIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSASALAELDVLVNLA
ERAYTLNYTCPTFTDKPGIRIIEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNM
GGKSTYMRQTALIALLAWIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMT
ETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELT
QLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQ
KLRELESISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRL
KSLV"
misc_feature complement(43344..45890)
/locus_tag="SARI_00042"
/note="DNA mismatch repair protein MutS; Provisional;
Region: PRK05399"
/db_xref="CDD:235444"
misc_feature complement(45534..45872)
/locus_tag="SARI_00042"
/note="MutS domain I; Region: MutS_I; pfam01624"
/db_xref="CDD:216613"
misc_feature complement(45135..45512)
/locus_tag="SARI_00042"
/note="MutS domain II; Region: MutS_II; pfam05188"
/db_xref="CDD:218486"
misc_feature complement(44328..45092)
/locus_tag="SARI_00042"
/note="MutS domain III; Region: MutS_III; pfam05192"
/db_xref="CDD:218489"
misc_feature complement(43524..44168)
/locus_tag="SARI_00042"
/note="ATP-binding cassette domain of MutS1 homolog;
Region: ABC_MutS1; cd03284"
/db_xref="CDD:213251"
misc_feature complement(44040..44063)
/locus_tag="SARI_00042"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213251"
misc_feature complement(order(43719..43721,43821..43826,43929..43931,
44037..44045,44049..44054))
/locus_tag="SARI_00042"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213251"
misc_feature complement(43929..43940)
/locus_tag="SARI_00042"
/note="Q-loop/lid; other site"
/db_xref="CDD:213251"
misc_feature complement(43875..43916)
/locus_tag="SARI_00042"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213251"
misc_feature complement(43821..43838)
/locus_tag="SARI_00042"
/note="Walker B; other site"
/db_xref="CDD:213251"
misc_feature complement(43803..43814)
/locus_tag="SARI_00042"
/note="D-loop; other site"
/db_xref="CDD:213251"
misc_feature complement(43713..43733)
/locus_tag="SARI_00042"
/note="H-loop/switch region; other site"
/db_xref="CDD:213251"
gene 46026..46379
/locus_tag="SARI_00043"
/db_xref="GeneID:5762036"
CDS 46026..46379
/locus_tag="SARI_00043"
/inference="similar to AA sequence:REFSEQ:YP_217827.1"
/note="'COG: NOG29516 non supervised orthologous group;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569138.1"
/db_xref="GI:161502026"
/db_xref="GeneID:5762036"
/translation="MVLLLLWATNSGDTLKTTLNQAFIINKLSIDVKPELSSSGKVVF
EANPDQKPYIVFDDHRDSPVGFGVKVSLTKKTYVIQRRVSSGDRSVSEGKKPSSVLKV
KVGNVSDFPSIDQAA"
gene complement(46535..47011)
/locus_tag="SARI_00044"
/db_xref="GeneID:5762037"
CDS complement(46535..47011)
/locus_tag="SARI_00044"
/inference="protein motif:HMMPfam:IPR000653"
/inference="protein motif:HMMPfam:IPR001584"
/inference="protein motif:superfamily:IPR012337"
/inference="similar to AA sequence:REFSEQ:NP_943514.1"
/note="'KEGG: nwi:Nwi_1143 1.4e-08 helix-turn-helix,
fis-type K00986;
COG: COG2801 Transposase and inactivated derivatives;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569139.1"
/db_xref="GI:161502027"
/db_xref="InterPro:IPR000653"
/db_xref="InterPro:IPR001584"
/db_xref="InterPro:IPR012337"
/db_xref="GeneID:5762037"
/translation="MDFVSDNLFNGRRFRALPVVDNFSRECLAIHAGKSLKGEDVVRI
MEALRVLDKRLPVRIQTDNGSEFISKSLDKWAYEHGVTMDFSRPGKPTDNPFIESFNG
SLRDECLNIHWFLSLEDAQEKLDNWRREYNHERTHSSLNDMTPAEFIRSLRKDEDL"
misc_feature complement(46550..>47011)
/locus_tag="SARI_00044"
/note="Transposase and inactivated derivatives [DNA
replication, recombination, and repair]; Region: Tra5;
COG2801"
/db_xref="CDD:225361"
misc_feature complement(46688..47011)
/locus_tag="SARI_00044"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:216050"
misc_feature complement(46577..46777)
/locus_tag="SARI_00044"
/note="Integrase core domain; Region: rve_3; pfam13683"
/db_xref="CDD:222316"
gene complement(47233..48171)
/locus_tag="SARI_00045"
/db_xref="GeneID:5762038"
CDS complement(47233..48171)
/locus_tag="SARI_00045"
/inference="protein motif:HMMPfam:IPR002513"
/inference="similar to AA sequence:REFSEQ:ZP_00829772.1"
/note="'COG: COG4644 Transposase and inactivated
derivatives, TnpA family;
Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569140.1"
/db_xref="GI:161502028"
/db_xref="InterPro:IPR002513"
/db_xref="GeneID:5762038"
/translation="MRFIAPVRTVHAGPNRKYFGSSRGITWYNFISDQYSGFHGVVVP
GTLRDSIFVLEGLLEQQTGLNPTEIMTDTAGSSDLIFGLFWLLGYQFSPRLADAGASV
FWRVDKDADYGVLNDLARNTANTRKIEQHWDDMMRMAGSLTLGKIRASVAIRSLLSSD
RPSGLTQAIIEAGKINKTLYLLNYIDDEDYRRRILTQLNRGESRHAVARAICHGQKGE
IRKRYQDGQEEQLGALGLVTNAVVLWNTIYIQAALDHLRNEGETINEEDEVRLSPLRH
AHINMLGHYTFTLAEQITKGQLRPLKQAEETDEWPL"
misc_feature complement(47317..>48171)
/locus_tag="SARI_00045"
/note="Tn3 transposase DDE domain; Region: DDE_Tnp_Tn3;
pfam01526"
/db_xref="CDD:216552"
gene complement(48295..49638)
/locus_tag="SARI_00046"
/db_xref="GeneID:5762039"
CDS complement(48295..49638)
/locus_tag="SARI_00046"
/inference="protein motif:HMMPfam:IPR002513"
/inference="similar to AA sequence:REFSEQ:ZP_00829772.1"
/note="'COG: COG4644 Transposase and inactivated
derivatives, TnpA family;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569141.1"
/db_xref="GI:161502029"
/db_xref="InterPro:IPR002513"
/db_xref="GeneID:5762039"
/translation="MPDGVRTSRFEQLRKGPVAISGPAFNQAVVRYLKLKAFGMQSLD
FTGIPPVRFNALARYADMISVYKIARMPPARRTAMLVAFVRSCEISALDNALDVLDGV
IADIGREAKKIGQKKRLRTLKDLDKSALELAHICSVLLDENIDSELLRTTIFEKCPPA
RLADTITFINAIARPPDASVHDEMVEQYGRVRRFLPCLLENIEFSAAPAGETTLEAIR
YLAAIRSTRRQHIDDAPMAIITGPWKRLCYGKDGHLSRQGYTLCVMNKLRDSLRRRDI
YVARSERWGDPRAKLLQGQDWHTSRVQVYRSLGHPLNAGEAVNALTRQLDTVYRQVAK
NFADNQAVSLDFTGKRTKLTIAHLNGLDEPPTLKLLSKHISDLLPVVDLTELLLEINA
HIGFADEFTHASEAGARMDDLTVSICAVLLAEACNIGMEPFIRPNIPALTRYRLS"
misc_feature complement(<48298..48471)
/locus_tag="SARI_00046"
/note="Tn3 transposase DDE domain; Region: DDE_Tnp_Tn3;
cl14901"
/db_xref="CDD:246756"
gene complement(49882..50337)
/locus_tag="SARI_00047"
/db_xref="GeneID:5762040"
CDS complement(49882..50337)
/locus_tag="SARI_00047"
/inference="protein motif:HMMPfam:IPR002513"
/inference="similar to AA sequence:INSD:CAC14717.1"
/note="'COG: COG4644 Transposase and inactivated
derivatives, TnpA family;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569142.1"
/db_xref="GI:161502030"
/db_xref="InterPro:IPR002513"
/db_xref="GeneID:5762040"
/translation="MLKILQSFRLAPKWEIRVKKTTVFFTHAREATLPADFLNADQRA
SYGQFSGEPNDVQLARFFLLDEADMAFINNRRGRANRLAVALLTGCVRFLGTWPHDLS
SIPANVQWFVARQLGISDTGVLSEYSRRETTLREHQALIRRQYGYRDFA"
misc_feature complement(<49885..50229)
/locus_tag="SARI_00047"
/note="Domain of unknown function (DUF4158); Region:
DUF4158; pfam13700"
/db_xref="CDD:222325"
gene 50412..50981
/locus_tag="SARI_00048"
/db_xref="GeneID:5762041"
CDS 50412..50981
/locus_tag="SARI_00048"
/inference="protein motif:Gene3D:IPR012287"
/inference="protein motif:HMMPfam:IPR006119"
/inference="protein motif:HMMPfam:IPR006120"
/inference="protein motif:ScanRegExp:IPR006118"
/inference="protein motif:superfamily:IPR009057"
/inference="similar to AA sequence:INSD:AAF23988.1"
/note="'COG: COG1961 Site-specific recombinases, DNA
invertase Pin homologs;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569143.1"
/db_xref="GI:161502031"
/db_xref="InterPro:IPR006118"
/db_xref="InterPro:IPR006119"
/db_xref="InterPro:IPR006120"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR012287"
/db_xref="GeneID:5762041"
/translation="MLVGYARVSTDDQNLNLQRDALKLAGCTKIFEDQISGAKAERPG
LHAVLQFIRPGDTLVVWRLDRLSRSLKDLIEMVRQLESNSIGLKSLQESIDTTSSSGM
LIFHLFGALAEFERNLTRERTQVGLQAARARGRKGGRPKVLNKDKQALAVQLYDERKH
TVAQICELMGVSRPTLYKYIDAARSVTNV"
misc_feature 50412..50951
/locus_tag="SARI_00048"
/note="multiple promoter invertase; Provisional; Region:
mpi; PRK13413"
/db_xref="CDD:184041"
misc_feature 50415..50789
/locus_tag="SARI_00048"
/note="Serine Recombinase (SR) family, Resolvase and
Invertase subfamily, catalytic domain; members contain a
C-terminal DNA binding domain. Serine recombinases
catalyze site-specific recombination of DNA molecules by a
concerted, four-strand cleavage and...; Region: SR_ResInv;
cd03768"
/db_xref="CDD:239737"
misc_feature order(50430..50432,50436..50438,50601..50606,50613..50615)
/locus_tag="SARI_00048"
/note="catalytic residues [active]"
/db_xref="CDD:239737"
misc_feature 50436..50438
/locus_tag="SARI_00048"
/note="catalytic nucleophile [active]"
/db_xref="CDD:239737"
misc_feature order(50598..50600,50730..50735,50739..50744,50754..50756)
/locus_tag="SARI_00048"
/note="Presynaptic Site I dimer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature order(50616..50618,50631..50636,50718..50720,50727..50732,
50739..50744,50751..50753,50760..50762)
/locus_tag="SARI_00048"
/note="Synaptic Antiparallel dimer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature order(50685..50693,50718..50723,50730..50735,50742..50744,
50754..50756,50763..50765,50775..50777)
/locus_tag="SARI_00048"
/note="Synaptic Flat tetramer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature order(50685..50687,50733..50735,50742..50744,50754..50756,
50763..50765,50775..50777)
/locus_tag="SARI_00048"
/note="Synaptic Site I dimer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature order(50757..50759,50775..50780)
/locus_tag="SARI_00048"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:239737"
misc_feature 50829..50951
/locus_tag="SARI_00048"
/note="Helix-turn-helix domain of Hin and related
proteins, a family of DNA-binding domains unique to
bacteria and represented by the Hin protein of Salmonella.
The basic HTH domain is a simple fold comprised of three
core helices that form a right-handed...; Region:
HTH_Hin_like; cd00569"
/db_xref="CDD:119388"
misc_feature order(50829..50834,50931..50936,50940..50948)
/locus_tag="SARI_00048"
/note="DNA-binding interface [nucleotide binding]; DNA
binding site"
/db_xref="CDD:119388"
gene 51090..52031
/locus_tag="SARI_00049"
/db_xref="GeneID:5762042"
CDS 51090..52031
/locus_tag="SARI_00049"
/inference="similar to AA sequence:INSD:ABP58869.1"
/note="'COG: COG3501 Uncharacterized protein conserved in
bacteria;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569144.1"
/db_xref="GI:161502032"
/db_xref="GeneID:5762042"
/translation="MIDQDDTMLTDITAVTDNAYKLNINNSPVIPDVLRFRGTEELSK
PFSWRIEFTTPQSNIRPEDMLMKYASFILRDSKRVHGIITRLEWLSTSADQSHYAATL
ESRLALLSRSRRCALYQNLSVPEVVEQVLRSHGLEGPDFDFRLSRQYPVRELITQWRE
TDLEFIQRILSEVGIWFRQEMNDVTELDVTLFGDSQLHYLFNGVLPYHEPSGLYDGAE
LCCWGVRTWHNTVTGTISTRDYNPRTASEPMDSAVSVRSPAVTIGEHYRYAEPYREAG
DDTTSEPESESGAFYARLHHERELNKSARVHLFSNAY"
misc_feature 51204..52025
/locus_tag="SARI_00049"
/note="Phage late control gene D protein (GPD); Region:
Phage_GPD; pfam05954"
/db_xref="CDD:218824"
gene 52044..53630
/locus_tag="SARI_00050"
/db_xref="GeneID:5762043"
CDS 52044..53630
/locus_tag="SARI_00050"
/inference="protein motif:HMMPfam:IPR006533"
/inference="similar to AA sequence:INSD:ABP58869.1"
/note="'COG: COG3501 Uncharacterized protein conserved in
bacteria;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569145.1"
/db_xref="GI:161502033"
/db_xref="InterPro:IPR006533"
/db_xref="GeneID:5762043"
/translation="MVFDPQGVNLKDLSDGVIITFTSFTGARDSRLHVSVWGMPYREE
YGFRPAEMARPEIHGTLPARVESREKNDTYAHIDEYGRFRVRLDFNLDDCEPGYAYPW
LRMAKPYTGDGYGWHTPLIDGTEVAIAYCNGDIDLPYISHAFHDSEHLDVVNRDNRSQ
NILRTAARNELRMEDKRGEEHIALSTEFAKSQLNQGNITDAQDKPRGTGFELRTDERG
VIRVAKGLFISADGQQKAAGGVLDMDTALREIDICLQQLRQLEMAAEQAQALKADVDS
QIRMFNERLKPLNETLVFSAPEGIALTSGEHMQLAATSNVAINAGGDISVGVMGNMTA
LAGDKIGMFSRTGQLSLKASEGTIEMQARNGNMRLFAEKKLTISSESDISFTGKKRIT
LIGGGSYLKLEAGKVEYGTTTTYMRKVKRTMAAAAQNMPMKMPRTGTAYIYSAIYQLQ
DKNGNILVNTPYHLTTPSGQTATGFSDNEGRSVPVYTRQQENVELHVLTKTSQPEESM
WFVGETDTQQLETELRESQP"
misc_feature 52293..52490
/locus_tag="SARI_00050"
/note="Phage-related baseplate assembly protein; Region:
Phage_base_V; pfam04717"
/db_xref="CDD:218225"
misc_feature 52518..52796
/locus_tag="SARI_00050"
/note="Putative type VI secretion system Rhs element Vgr;
Region: T6SS_Vgr; pfam13296"
/db_xref="CDD:205476"
misc_feature 52884..53276
/locus_tag="SARI_00050"
/note="Uncharacterized protein conserved in bacteria
(DUF2345); Region: DUF2345; pfam10106"
/db_xref="CDD:220574"
gene 53630..54919
/locus_tag="SARI_00051"
/db_xref="GeneID:5762044"
CDS 53630..54919
/locus_tag="SARI_00051"
/inference="similar to AA sequence:REFSEQ:YP_001110267.1"
/note="'COG: NOG18468 non supervised orthologous group;
Psort location: endoplasmic reticulum, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569146.1"
/db_xref="GI:161502034"
/db_xref="GeneID:5762044"
/translation="MEMPDLPDTPTGAPNAPTGTNNQPWDCTTTGVEMVEKQSRLPNT
ENRQYLHIKVEYAMRFPQLSAQIRREGKTYRMSLKQTMMSGLIRVDEIARNYCWYYKA
EVAFDMRTTPPRPFLSSTLLKKDGAGRRHTTNPFPVPGKGIYRRPDVIIVKNKEDRWP
GLAGPDTEGNMHSDNLARLVEVKFPGDTLYEDQYDEYMKIVGKDRNRMTILEIHDCRP
EEHQWIDQAVNVTMKAWQTSGAKYWPLVLYPPIFMPRPPSTPAAARIEPWTYAGHVVA
DLSEGAVRGVAEGWDALSKETQQVLNSAASWLNDSGEWVYRKGSEAWVWASKTGKSVK
SWTNAQIKAAWTEIQHATDMTLDMLKQVDWVQVLTNVAKTVGVILVAVGIGVLVVTLG
ILEAIIGAFLLIVRLAISAWGTLAAILGTGTAALAVQ"
misc_feature 53921..54274
/locus_tag="SARI_00051"
/note="This model contains proteins with the VRR-NUC
domain; Region: VRR_NUC; smart00990"
/db_xref="CDD:214959"
gene 54932..56146
/locus_tag="SARI_00052"
/db_xref="GeneID:5762045"
CDS 54932..56146
/locus_tag="SARI_00052"
/inference="similar to AA sequence:REFSEQ:NP_794057.1"
/note="'COG: NOG18467 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569147.1"
/db_xref="GI:161502035"
/db_xref="GeneID:5762045"
/translation="MELQDFELSYIEKWLPEASVKYKDGSPAVNLGLIITVFFKDGHT
PEVRRRMVECVDRFYAEFKPHLKKTITKNWVGITEKNYAKKRQEILDSTPEEIFSWYL
GSAEQDFLAPDYSILIMGKRIFHNDNDRSVIKLTLPLSLLKEPDGKKRYEGWLMWLCD
TFSVESGYAGLSFALPYARERMFPYEFALAQRFSGVMVDSLGTLEGGEAVEGLKGACW
YTILGTPWLEKLGGAERLRHRLAKTPEISLLSYNNGILLKAGELPPPLGEMKIEGLSP
LLIKVNQIIRPVRYDGHNGLHFHSEYENFQFEKESSMAWFARFDEASALLDKEEMGKS
YDPVRIKCWTDETAPHAGQWAAMVNGTTEYIQTREGQKLPPFEDKYGKQHRACWKLLK
RDDNGSVYTLPE"
misc_feature 55265..55888
/locus_tag="SARI_00052"
/note="Protein of unknown function (DUF3396); Region:
DUF3396; pfam11876"
/db_xref="CDD:221284"
gene 56215..56487
/locus_tag="SARI_00053"
/db_xref="GeneID:5762046"
CDS 56215..56487
/locus_tag="SARI_00053"
/inference="similar to AA sequence:INSD:EDK49629.1"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569148.1"
/db_xref="GI:161502036"
/db_xref="GeneID:5762046"
/translation="MIELSAEQRQLAKIVHDYASQFPLTEDGDTQLLQGCYDYMEAFK
GVMDSASKVQMDYICLQYPGYFRFAKWMERLAQGIADGVIKVPKDH"
gene complement(56661..56891)
/locus_tag="SARI_00054"
/db_xref="GeneID:5762047"
CDS complement(56661..56891)
/locus_tag="SARI_00054"
/inference="similar to AA sequence:INSD:AAS58598.1"
/note="'COG: COG2801 Transposase and inactivated
derivatives;
Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569149.1"
/db_xref="GI:161502037"
/db_xref="GeneID:5762047"
/translation="MREAYRISVRRGCGLLMQSRTVYHWQSRRDDRAITLRIREIAET
RIRYGCPRIHIQLRREGWPVKGSEAQPYENVR"
gene complement(56924..57190)
/locus_tag="SARI_00055"
/db_xref="GeneID:5762048"
CDS complement(56924..57190)
/locus_tag="SARI_00055"
/inference="protein motif:Gene3D:IPR012287"
/inference="protein motif:HMMPfam:IPR002514"
/inference="protein motif:superfamily:IPR009057"
/inference="similar to AA sequence:REFSEQ:YP_153352.1"
/note="'COG: COG2801 Transposase and inactivated
derivatives;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569150.1"
/db_xref="GI:161502038"
/db_xref="InterPro:IPR002514"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR012287"
/db_xref="GeneID:5762048"
/translation="MKKTRYTEEQIAFALKQAETGTRVGEVCRKMGISEATFYNWKKK
FAGLGVTELRRLRQLEDENQRLKKLVAELSLDKEMLQEVLKQKF"
misc_feature complement(57068..57187)
/locus_tag="SARI_00055"
/note="Helix-turn-helix domain of Hin and related
proteins, a family of DNA-binding domains unique to
bacteria and represented by the Hin protein of Salmonella.
The basic HTH domain is a simple fold comprised of three
core helices that form a right-handed...; Region:
HTH_Hin_like; cd00569"
/db_xref="CDD:119388"
misc_feature complement(order(57068..57076,57080..57085,57179..57187))
/locus_tag="SARI_00055"
/note="DNA-binding interface [nucleotide binding]; DNA
binding site"
/db_xref="CDD:119388"
misc_feature complement(<56936..57157)
/locus_tag="SARI_00055"
/note="Winged helix-turn helix; Region: HTH_29; pfam13551"
/db_xref="CDD:222216"
gene complement(57942..58538)
/locus_tag="SARI_00056"
/db_xref="GeneID:5762049"
CDS complement(57942..58538)
/locus_tag="SARI_00056"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569151.1"
/db_xref="GI:161502039"
/db_xref="GeneID:5762049"
/translation="MPSALSEFNFSFDQKEKIKKVLYDEVFSDLYINLLRLDNLLRPY
LVLNHDLSYFDKFTAELTNNQIKRSLRDNQTEFNVRSPIIKDGYARPFYICSVFENYA
TCNSNNSLGLQIVDVLISNFNRALKGNFDNPIQIAKAIGKLTINSYIKGVYPIELIYL
SEKLTLSKDELSLISMVEDMPYKLFGFKKDPDNIYKGI"
gene complement(58813..59001)
/locus_tag="SARI_00057"
/db_xref="GeneID:5762050"
CDS complement(58813..59001)
/locus_tag="SARI_00057"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569152.1"
/db_xref="GI:161502040"
/db_xref="GeneID:5762050"
/translation="MNFYIDESGNFSLKNSTWNSVGILAIPHQKEEEIASFVKTLKNK
IGIKKDDELKDYFRRDFD"
gene complement(59668..60087)
/locus_tag="SARI_00058"
/db_xref="GeneID:5762051"
CDS complement(59668..60087)
/locus_tag="SARI_00058"
/note="'Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569153.1"
/db_xref="GI:161502041"
/db_xref="GeneID:5762051"
/translation="MTNMDSKKLKRCAQIILFFYGASFLLTFLIGISNLIPPYIYIIF
FTPFFVAYCGFSIYLGRKKVFKSLNDSILFSFAPIAMFKPVKILLFKAENINETISNS
DKILMCLYLLIAVCSIIKALISLNELYDNLKKPEKNS"
gene complement(60099..60446)
/locus_tag="SARI_00059"
/db_xref="GeneID:5762052"
CDS complement(60099..60446)
/locus_tag="SARI_00059"
/inference="protein motif:HMMPfam:IPR010862"
/inference="similar to AA sequence:INSD:AAL21782.1"
/note="'COG: NOG11501 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569154.1"
/db_xref="GI:161502042"
/db_xref="InterPro:IPR010862"
/db_xref="GeneID:5762052"
/translation="MDILLMDTIQQEVLALFREEIPGYLDSNWKEIPLELDSDLFEVP
GDDLHEALDKFERKFNVDLSQVKWSYYFPWENTPLFARWFKLKREDVERTRKPLTIKM
FAESAKAGKWLYD"
misc_feature complement(60102..60431)
/locus_tag="SARI_00059"
/note="Protein of unknown function (DUF1493); Region:
DUF1493; pfam07377"
/db_xref="CDD:219390"
gene complement(60431..60880)
/locus_tag="SARI_00060"
/db_xref="GeneID:5762053"
CDS complement(60431..60880)
/locus_tag="SARI_00060"
/inference="similar to AA sequence:INSD:AAL21781.1"
/note="'COG: NOG27628 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569155.1"
/db_xref="GI:161502043"
/db_xref="GeneID:5762053"
/translation="MDTTEELNETYFYHGQSNLSAGELFDVIFLEQFCDELGIGIESG
AAILAGQPWLKTRTKPGEAIKGTSVISKYGRMLLRNARTPFGIRVPTPVGVRMRKTNN
LAAVIARYVPWLGWVGLVNSIYQVSRKTQAKYNLIARPKDRIQWTSF"
gene complement(60890..61372)
/locus_tag="SARI_00061"
/db_xref="GeneID:5762054"
CDS complement(60890..61372)
/locus_tag="SARI_00061"
/inference="protein motif:HMMPfam:IPR008514"
/inference="similar to AA sequence:REFSEQ:ZP_00823859.1"
/note="'COG: COG3157 Hemolysin-coregulated protein
(uncharacterized);
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569156.1"
/db_xref="GI:161502044"
/db_xref="InterPro:IPR008514"
/db_xref="GeneID:5762054"
/translation="MAIPGNMWLYDDGGALIKGGCDVADREFSIEFKGFHHNLSIPTD
NATGKPTGTRQHSPMIIVKEFDYSSPYLYKAVATGQNLKSAEIKWYKISDAGQEVEYF
NMLLEGVRIVSISPTMASPEDKNNNHLESVELRYEKITWKHCDGNIIFTDAWNERQTA
"
misc_feature complement(60902..61369)
/locus_tag="SARI_00061"
/note="type VI secretion system effector, Hcp1 family;
Region: VI_effect_Hcp1; TIGR03344"
/db_xref="CDD:213799"
gene complement(61793..62560)
/locus_tag="SARI_00062"
/db_xref="GeneID:5762055"
CDS complement(61793..62560)
/locus_tag="SARI_00062"
/inference="similar to AA sequence:REFSEQ:ZP_00823810.1"
/note="'Psort location: extracellular, including cell
wall, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569157.1"
/db_xref="GI:161502045"
/db_xref="GeneID:5762055"
/translation="MNFLSKTVVVVLAATLLSGCDNRPDKTLSPPVGAKWVDVTFRVP
EGITLQPAELLYRSAQCKSVRYNSSNEPHDIPGYNDVERPFGAPDGDNIRRLRVAVDG
GGSCQWQLNSLKVSFRIADYVPLMKGKEVIDTSYIFDFGDYGLSDGYGTGRAKVFSEK
ILDLNTDFFPMVANHIDNTVSLKLFGGETGTEKWRRRFSLSNTQHIAIEPVVHLMKVV
VLNPPDHPGNLTATYPDGSREDIPNISPDYDKLLSMK"
gene complement(62544..64607)
/locus_tag="SARI_00063"
/db_xref="GeneID:5762056"
CDS complement(62544..64607)
/locus_tag="SARI_00063"
/inference="protein motif:HMMPfam:IPR002921"
/inference="similar to AA sequence:REFSEQ:ZP_00823825.1"
/note="'KEGG: pen:PSEEN5483 4.6e-11 lipase K01066;
COG: COG3675 Predicted lipase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569158.1"
/db_xref="GI:161502046"
/db_xref="InterPro:IPR002921"
/db_xref="GeneID:5762056"
/translation="MEIIGNNTCVTSLRPKYKAVQCRGEQHKYWLELQFVDENNTPVS
GLNVRLEYHPLASAKDVEMWRKSGYDYNPTPPPNPPAGVTDSQGVVRFDDLYWIAVDV
NTDGQPLADEMEKRPLGLRRNPNSQPVSNNMFRPETRDPKWRSDVQEKAEVAGYIHHY
VTIGELCDQLPEIEGWAEPEPPKFHFPPGRSLKGTEIARDALDKRHVIEVCPFRAWVL
ALHDTKEYDLANALNLSIMADLVYAAEVKNPTIDYFFRQKCQDLSCLPQLVEYPNYFH
MLAVDVPFRERYQPPLYMNTGEGALGEGDTRLFTVECTSHVLVSWCGTDSLLNVQTDV
SFGPKRCPAELGGMGDVHGGFLEAYQLPKRKFGDKLDAVKDSLGKRKTLFVCGHSLGG
ALALLYAAEMKAFNPVLYTYGMPRTFSRLAAYLLRGIIHYRHANDNDTVTQIPPEVDL
DSELYEKLGWLGDKLGFDWVTTSAIGLLPRTFGGNAGVDMGITQERDPYWHHGKTVLF
LRAEQSVMRSGERNALWIGGGTVSYTEKAAVKLYLVPALNEECLTSTREHQAAFIQCL
APGELEKRFPKGENTASSGWFSKPSNHSMAHRYLPYIHNQVLELADPARDMDRKAMRA
MFREGVEQKANFSNPDEVERNREFLALQDMLPVALRLTQAEETGKNALLRFAAVTEEK
VELSQ"
misc_feature complement(63243..>63704)
/locus_tag="SARI_00063"
/note="Lipase (class 3). Lipases are esterases that can
hydrolyze long-chain acyl-triglycerides into di- and
monoglycerides, glycerol, and free fatty acids at a
water/lipid interface. A typical feature of lipases is
'interfacial activation,' the...; Region: Lipase_3;
cd00519"
/db_xref="CDD:238287"
misc_feature complement(order(63603..63629,63633..63638))
/locus_tag="SARI_00063"
/note="active site flap/lid [active]"
/db_xref="CDD:238287"
misc_feature complement(63435..63449)
/locus_tag="SARI_00063"
/note="nucleophilic elbow; other site"
/db_xref="CDD:238287"
misc_feature complement(order(63291..63293,63441..63443))
/locus_tag="SARI_00063"
/note="catalytic triad [active]"
/db_xref="CDD:238287"
gene complement(64680..65543)
/locus_tag="SARI_00064"
/db_xref="GeneID:5762057"
CDS complement(64680..65543)
/locus_tag="SARI_00064"
/inference="protein motif:HMMPfam:IPR006922"
/inference="similar to AA sequence:INSD:"
/note="'KEGG: pol:Bpro_3660 5.2e-05 ribonuclease, Rne/Rng
family K08300;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569159.1"
/db_xref="GI:161502047"
/db_xref="InterPro:IPR006922"
/db_xref="GeneID:5762057"
/translation="MSSHLKMATDVRQKSSEQANATGQLLKQEFDRLGKCVSEALSLS
GQKISDDIAARNQELSDALRHHSNGMTEAMQSHRERRDAPGNAPVAVSAHDLAAAGRD
VRGRAVAPELENSGEPGRNRGAERHAGEAEREDVGRDVSGGQQRTFSGAAEGYESRSG
LDGGEREAERGEAGEGVRADDRAGNAVAERIRAATAGLLAKAGRVGERLRGIADDVWS
YARGQRAAERAGHALESAGGALERATESFEPVVQRHKYEVAAARAQVVHEQRQKELVK
EREYPGPSLEL"
misc_feature complement(65388..65543)
/locus_tag="SARI_00064"
/note="MbeB-like, N-term conserved region; Region: MbeB_N;
pfam04837"
/db_xref="CDD:113603"
gene complement(65676..66062)
/locus_tag="SARI_00065"
/db_xref="GeneID:5762058"
CDS complement(65676..66062)
/locus_tag="SARI_00065"
/note="'Psort location: extracellular, including cell
wall, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569160.1"
/db_xref="GI:161502048"
/db_xref="GeneID:5762058"
/translation="MFFVLSLFLLSACSLQAEFTPEGENLNDATVGVPYYNQINIFGG
IVLSYDIYGKQVIAGDIHPDNLGLHLQYCGDDEFNNCIQIRGIPTKAGIAKVRIHGGL
GGGMLSKSGEFDKTYTVTIKDSEGSS"
gene complement(66145..67089)
/locus_tag="SARI_00066"
/db_xref="GeneID:5762059"
CDS complement(66145..67089)
/locus_tag="SARI_00066"
/inference="similar to AA sequence:REFSEQ:ZP_01494838.1"
/note="'Psort location: cytoskeletal, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569161.1"
/db_xref="GI:161502049"
/db_xref="GeneID:5762059"
/translation="MTGNINEPLSTIYIMEMKLYRKTMLHTHCVTPVPFTKMYTLEEF
ASGKAWSPVKRENPCYFESKGTMKPESQGGETKHIKITVPERPFIAKEYPIGNPRDPF
DKNLIERQIDERFNGFDFPNQIAASVCGPAAFFYCLQKDRPDAYAQAARELWRYGKTK
IGDLIISPGEGCRHPTGIFYYDDGKPKIAGTDWMTLAGLRDSENTVLSFDALDSPVAG
ITMWQTLTEWFEKAGYERIFSNVGITQAGIQGIRDLNKYKEQGYKVVTLINDGLLVNS
TNKTTLPTHWVVWDGLVTQDSNGYISLELYSRGKQETG"
gene complement(67158..67472)
/locus_tag="SARI_00067"
/db_xref="GeneID:5762060"
CDS complement(67158..67472)
/locus_tag="SARI_00067"
/inference="similar to AA sequence:REFSEQ:ZP_01494839.1"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569162.1"
/db_xref="GI:161502050"
/db_xref="GeneID:5762060"
/translation="MLCRCPDHYVYGSATQSTSTGTGSLTSRNTSQSPVPAQQAQDSG
ARNCIRFQCAGDDGQLMAGCRYTLMFPDGRSEAGVTDEHGVTGWHYAESAKDISLHIL
TD"
gene 67567..68139
/locus_tag="SARI_00068"
/db_xref="GeneID:5762061"
CDS 67567..68139
/locus_tag="SARI_00068"
/inference="protein motif:HMMPfam:IPR001207"
/inference="similar to AA sequence:REFSEQ:NP_783715.1"
/note="'COG: COG3328 Transposase and inactivated
derivatives;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569163.1"
/db_xref="GI:161502051"
/db_xref="InterPro:IPR001207"
/db_xref="GeneID:5762061"
/translation="MSQPFDFDKALKALQSGQALTGKDGILTPLIKPLTEAALAAELD
SHLASDVEANRKNGSGKKTIKAATGSFELATPRDRNGTFEPQLVKKHQTTLSDEIVHK
IIRLFALGMSCQDISREIEDLYALSVSTATISAVTDKVIPELKQWQQRPLEKVYPFVR
LDAIHYKVREDGAIRCGSFYHDAMGKAVAG"
misc_feature 67591..>68091
/locus_tag="SARI_00068"
/note="Transposase, Mutator family; Region:
Transposase_mut; pfam00872"
/db_xref="CDD:216166"
gene complement(68304..68612)
/locus_tag="SARI_00070"
/db_xref="GeneID:5762062"
CDS complement(68304..68612)
/locus_tag="SARI_00070"
/note="'Psort location: extracellular, including cell
wall, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569164.1"
/db_xref="GI:161502053"
/db_xref="GeneID:5762062"
/translation="MKVASETLKSSDRRGVSIRWNGDNVEFSANINASSMRMDNRHSG
GFFHGNLLAHFSMNEGGDDGEITFLNGNKVTTVGSATVPEPCFFTGSYHQKADGCFLR
"
gene 68451..68774
/locus_tag="SARI_00069"
/db_xref="GeneID:5762064"
CDS 68451..68774
/locus_tag="SARI_00069"
/inference="similar to AA sequence:INSD:ABL64095.1"
/note="'COG: COG3547 Transposase and inactivated
derivatives;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569165.1"
/db_xref="GI:161502052"
/db_xref="GeneID:5762064"
/translation="MSKEISMKKSSRMSVIHPHAAGVDIGAEFHVVAVPPDADAAPVR
TFQRFTGDLHRMSGWLKTCHITTIAMESTGFYWLPAFEIPEAAGFNVILVNARDAKKC
SRSQD"
misc_feature 68511..>68753
/locus_tag="SARI_00069"
/note="Transposase; Region: DEDD_Tnp_IS110; pfam01548"
/db_xref="CDD:216564"
gene 68535..69810
/locus_tag="SARI_00071"
/pseudogene="unknown"
/db_xref="GeneID:5762063"
gene 69922..70074
/locus_tag="SARI_00072"
/db_xref="GeneID:5762065"
CDS 69922..70074
/locus_tag="SARI_00072"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569167.1"
/db_xref="GI:161502055"
/db_xref="GeneID:5762065"
/translation="MRGSSQQLQMLEKRFFIANKKAAARRCCIKKQFDKCNVRDKWLT
VKVTTL"
gene complement(70155..70598)
/locus_tag="SARI_00073"
/db_xref="GeneID:5762066"
CDS complement(70155..70598)
/locus_tag="SARI_00073"
/inference="protein motif:HMMPfam:IPR006830"
/inference="similar to AA sequence:INSD:AAC45074.1"
/note="'COG: NOG28130 non supervised orthologous group;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569168.1"
/db_xref="GI:161502056"
/db_xref="InterPro:IPR006830"
/db_xref="GeneID:5762066"
/translation="MKKFYSCLPVFLLIGCAQVPPPSSGSKPVQQPEVQKEQQANANS
IDKCMSLPYVPSDLTENKTLSNQKSENSTSKNNTISSSVFCEKYRQTKEQAFTFFQEY
PQYMRSKEDEEQLMTEFKKVLLESGSNNLSIYQTLLTAHKRLQTL"
misc_feature complement(70158..70598)
/locus_tag="SARI_00073"
/note="InvH outer membrane lipoprotein; Region: InvH;
pfam04741"
/db_xref="CDD:113509"
gene 70957..71706
/locus_tag="SARI_00074"
/db_xref="GeneID:5762067"
CDS 70957..71706
/locus_tag="SARI_00074"
/inference="protein motif:FPrintScan:IPR000005"
/inference="protein motif:Gene3D:IPR012287"
/inference="protein motif:HMMPfam:IPR000005"
/inference="protein motif:HMMSmart:IPR000005"
/inference="protein motif:ScanRegExp:IPR000005"
/inference="protein motif:superfamily:IPR009057"
/inference="similar to AA sequence:REFSEQ:YP_217818.1"
/note="'COG: NOG14596 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569169.1"
/db_xref="GI:161502057"
/db_xref="InterPro:IPR000005"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR012287"
/db_xref="GeneID:5762067"
/translation="MLNTQEVLKEGEKRRVRSPEAWFMQACSAQKLHMSFSEGRHNES
CLIQEGALLFIEQAVVAPVSGDLVFRPLKIEVLSKLLAFIDGAGLMNTTYAEPNKWVL
LSPEFRAIWQDRKRCEYWFLQQIITPSPDFNKVLTLLRKSESYWLVGYLLAQSTSGST
MRMLGEDYGVSYTHFRRLCSRALGGKAKSELRNWRMAQSLLNSVEGHANITQLAVNNG
YSSPSHFSNEIKELIGVSPRKLSNIIQLADK"
misc_feature 71056..71703
/locus_tag="SARI_00074"
/note="transcriptional regulator InvF; Provisional;
Region: PRK15340"
/db_xref="CDD:185240"
gene 71703..73394
/locus_tag="SARI_00075"
/db_xref="GeneID:5762068"
CDS 71703..73394
/locus_tag="SARI_00075"
/inference="protein motif:HMMPfam:IPR004846"
/inference="protein motif:HMMPfam:IPR005644"
/inference="protein motif:HMMTigr:IPR003522"
/inference="protein motif:ScanRegExp:IPR004845"
/inference="similar to AA sequence:REFSEQ:NP_461819.1"
/note="'COG: COG1450 Type II secretory pathway, component
PulD;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569170.1"
/db_xref="GI:161502058"
/db_xref="InterPro:IPR003522"
/db_xref="InterPro:IPR004845"
/db_xref="InterPro:IPR004846"
/db_xref="InterPro:IPR005644"
/db_xref="GeneID:5762068"
/translation="MKTHILLARVLACAALVLVAPGYSSEKIPVTGSGFVAKDDSLRT
FFDAMALQLKEPVIVSKMAARKKITGNFEFNDPNALLEKLSLQLGLIWYFDGQAIYIY
DASEMRNAVVSLRNVSLNEFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDLVV
NAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQGE
EQPLGNITSSEPVPAMPAFSANGEKSKTANYAGGMSLQEALKQNAAAGDIKIVAYPDT
NSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGASWSGSITIGD
KLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYT
KLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDTTPQTEITASVDALPE
VGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKIPFIGGLFRYSSKNKSNV
VRVFLIEPKEIVDPLTPDASESVNNILKQSGTWSGDDKLQKWVRVYLDRGQEAIK"
misc_feature 71706..73391
/locus_tag="SARI_00075"
/note="type III secretion system outer membrane pore InvG;
Provisional; Region: PRK15339"
/db_xref="CDD:237948"
misc_feature 72033..72209
/locus_tag="SARI_00075"
/note="Bacterial type II/III secretion system short
domain; Region: Secretin_N; pfam03958"
/db_xref="CDD:217815"
misc_feature 72444..72608
/locus_tag="SARI_00075"
/note="Bacterial type II/III secretion system short
domain; Region: Secretin_N; pfam03958"
/db_xref="CDD:217815"
misc_feature 72777..73265
/locus_tag="SARI_00075"
/note="Bacterial type II and III secretion system protein;
Region: Secretin; pfam00263"
/db_xref="CDD:215826"
gene 73391..74509
/locus_tag="SARI_00076"
/db_xref="GeneID:5762069"
CDS 73391..74509
/locus_tag="SARI_00076"
/inference="protein motif:HMMPfam:IPR003520"
/inference="protein motif:HMMTigr:IPR013401"
/inference="similar to AA sequence:INSD:AAC45044.1"
/note="'COG: NOG06182 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569171.1"
/db_xref="GI:161502059"
/db_xref="InterPro:IPR003520"
/db_xref="InterPro:IPR013401"
/db_xref="GeneID:5762069"
/translation="MIPGSTSGISFSRILSRQTSHQDATQHTDAQQAEIQQAAEDSSP
GAEVQKFVQSTDEMSAALAQFRNRRDYEKKSSNLSNSFERVLEDEALPKAKQILKLIS
VHGGALEDFLRQARSLFPDPSDLVLVLRELLRRKDLEEIVRKKLESLLKHVEEQTDPR
TLKAGINCALKARLFGKTLSLKPGLLRASYRQFIQSESHEVEIYADWIASYGYQRRLV
VLDFIEGSLLTDIDANDASCSRLEFGQLLRRLTQLKMLRSADLLFVSTLLSYSFTKAF
NAEESSWLLLMLSLLQQPHEVDSLLADIIGLNALLLSHKEHASFLQIFYQVCKAIPSS
LFYEEYWQEELLMALRSMTDIAYKHEMAEQRRTIEKPS"
misc_feature 73391..74506
/locus_tag="SARI_00076"
/note="type III secretion system regulator InvE;
Provisional; Region: PRK15338"
/db_xref="CDD:237947"
misc_feature 73511..74200
/locus_tag="SARI_00076"
/note="type III secretion regulator YopN/LcrE/InvE/MxiC;
Region: LcrE; TIGR02568"
/db_xref="CDD:233933"
gene 74594..76591
/locus_tag="SARI_00077"
/db_xref="GeneID:5762070"
CDS 74594..76591
/locus_tag="SARI_00077"
/inference="protein motif:HMMPfam:IPR001712"
/inference="protein motif:HMMTigr:IPR006302"
/inference="protein motif:ScanRegExp:IPR001712"
/note="'COG: COG4789 Type III secretory pathway, component
EscV;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569172.1"
/db_xref="GI:161502060"
/db_xref="InterPro:IPR001712"
/db_xref="InterPro:IPR006302"
/db_xref="GeneID:5762070"
/translation="MVMIISMFVIPLPTYLVDFLIALNIVLAILVFMGSFYIDRILSF
STFPAVLLITTLFRLALSISTSRLILIEADAGEIIATFGQFVIGDSLAVGFVVFSIVT
VVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLKAGIIDADAARERRSVLERES
QLYGSFDGAMKFIKGDAIAGIIIIFVNFIGGISVGMTRHGMDLSSALSTYTMLTIGDG
LVAQIPALLIAISAGFIVTRVNGDSDNMGRNIMTQLLNNPFVLVVTAILTISMGTLPG
FPLPVFVILSVVLSVLFYFKFREAKRSAGTPKTSKGEQPLSIEEKEGTSLGLIGDLDK
VSTETVPLILLVPKSRREDLEKAQLADRLRSQFFIDYGVRLPEVLLRDGEGLDDNSIV
LLINEIRVEQFTVYFDLMRVVNYSDEVVSFGINPTTHQQGSSQYFWVTHEEGEKLREL
GYVLRNALDELYHCLAVTLARNVNEYFGIQETKHMLDQLEAKFPDLLKEVLRHATVQR
ISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVINLVEHIRGAMARYICHKFANGG
ELRAVMVSAEVEDVIRKGIRQTSGSTFLSLEPEASANLMDLITLKLDDLLIAHKDLVL
LTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKTI"
misc_feature 74594..76588
/locus_tag="SARI_00077"
/note="Type III secretory pathway, component EscV
[Intracellular trafficking and secretion]; Region: EscV;
COG4789"
/db_xref="CDD:227127"
misc_feature 74594..76588
/locus_tag="SARI_00077"
/note="type III secretion system protein InvA;
Provisional; Region: PRK15337"
/db_xref="CDD:237946"
gene 76615..77022
/locus_tag="SARI_00078"
/db_xref="GeneID:5762071"
CDS 76615..77022
/locus_tag="SARI_00078"
/inference="protein motif:BlastProDom:IPR003065"
/inference="protein motif:FPrintScan:IPR003065"
/inference="protein motif:HMMPfam:IPR003065"
/inference="similar to AA sequence:INSD:CAD06002.1"
/note="'COG: NOG14129 non supervised orthologous group;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569173.1"
/db_xref="GI:161502061"
/db_xref="InterPro:IPR003065"
/db_xref="GeneID:5762071"
/translation="MQHLDIAELVRSALEVSGCDPSLIGGIDSHSTIVLDLFALPSIC
ISVKDDDVWIWAQLGADSMVVLQQRAYEILMTIMEGCQFVRGGQLLLGEQNGELTLKA
LVHPDFLSDGEKFSNALNGFYNYLEVFSRSLMR"
misc_feature 76615..77019
/locus_tag="SARI_00078"
/note="type III secretion system chaperone SpaK;
Provisional; Region: PRK15336"
/db_xref="CDD:185236"
gene 77019..78314
/locus_tag="SARI_00079"
/db_xref="GeneID:5762072"
CDS 77019..78314
/locus_tag="SARI_00079"
/inference="protein motif:HMMPfam:IPR000194"
/inference="protein motif:HMMPfam:IPR004100"
/inference="protein motif:HMMSmart:IPR003593"
/inference="protein motif:HMMTigr:IPR005714"
/inference="protein motif:ScanRegExp:IPR000194"
/inference="protein motif:superfamily:IPR004100"
/inference="similar to AA sequence:INSD:AAL21774.1"
/note="Invasion protein InvC; necessary for efficient
entry of S.typhimurium into cultured epithelial cells.
Probable catalytic subunit of a protein translocase"
/codon_start=1
/transl_table=11
/product="ATP synthase SpaL"
/protein_id="YP_001569174.1"
/db_xref="GI:161502062"
/db_xref="InterPro:IPR000194"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR004100"
/db_xref="InterPro:IPR005714"
/db_xref="GeneID:5762072"
/translation="MKTPRLLQYLAYPQKITGPIIEAELRDVAIGELCEIRRGWHQKQ
VVARAQVVGLQRERTVLSLIGNAQGLTRDVVLYPTGRALSAWVGYSVLGAVLDPTGKI
VERFTTEVAPISEERVIDVAPPPYASRVGVHEPLITGVRAIDGLLTCGVGQRMGIFAS
AGCGKTMLMHMLIEQTEADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDF
PSVDRCNAAQLATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPA
SVFDNLPRLLERPGATGDGSITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAG
QGHYPAIDVLKSVSRVFGQVTTATHAKQASSVRKLMTRLEELQLFIDLGEYRPGENID
NDRAMQMRDSLKAWLCQPVTQYSSFDDTLSGMNAFADQD"
misc_feature 77028..78305
/locus_tag="SARI_00079"
/note="ATP synthase SpaL; Validated; Region: PRK08149"
/db_xref="CDD:236166"
misc_feature 77061..77258
/locus_tag="SARI_00079"
/note="ATP synthase alpha/beta family, beta-barrel domain;
Region: ATP-synt_ab_N; pfam02874"
/db_xref="CDD:217261"
misc_feature 77277..78245
/locus_tag="SARI_00079"
/note="RecA-like NTPases. This family includes the NTP
binding domain of F1 and V1 H+ATPases, DnaB and related
helicases as well as bacterial RecA and related eukaryotic
and archaeal recombinases. This group also includes
bacterial conjugation proteins and...; Region:
RecA-like_NTPases; cl17233"
/db_xref="CDD:247787"
misc_feature order(77493..77498,77508..77516)
/locus_tag="SARI_00079"
/note="Walker A motif; other site"
/db_xref="CDD:238540"
misc_feature order(77496..77498,77508..77516,77565..77567,77571..77576,
77763..77768)
/locus_tag="SARI_00079"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238540"
misc_feature 77751..77765
/locus_tag="SARI_00079"
/note="Walker B motif; other site"
/db_xref="CDD:238540"
gene 78391..78735
/locus_tag="SARI_00080"
/db_xref="GeneID:5762073"
CDS 78391..78735
/locus_tag="SARI_00080"
/inference="protein motif:HMMPfam:IPR002954"
/inference="similar to AA sequence:INSD:AAC45013.1"
/note="'KEGG: bta:282041 0.0055 ROCK2; Rho-associated,
coiled-coil containing protein kinase 2 K04514;
COG: NOG18535 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569175.1"
/db_xref="GI:161502063"
/db_xref="InterPro:IPR002954"
/db_xref="GeneID:5762073"
/translation="MLHAEEEAIVEQIAGLKLLLDTLRAENRQLSREEIYSLLRRQSI
VRRQIRDLQLQITQIQEKRCELEKKTQEFQEKSKYWLRKEGNYQRWIVRQKRFYIQRE
IQQEEAESEEII"
misc_feature <78391..78684
/locus_tag="SARI_00080"
/note="type III secretion system protein SpaM;
Provisional; Region: PRK15335"
/db_xref="CDD:185235"
gene 78735..79742
/locus_tag="SARI_00081"
/db_xref="GeneID:5762074"
CDS 78735..79742
/locus_tag="SARI_00081"
/inference="protein motif:HMMPfam:IPR003066"
/inference="similar to AA sequence:INSD:AAC45014.1"
/note="'COG: NOG19627 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569176.1"
/db_xref="GI:161502064"
/db_xref="InterPro:IPR003066"
/db_xref="GeneID:5762074"
/translation="MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSDDKK
DREYGDTFMMHKETALPLLLAALRHGAPAKSEQHNGSVSGLHHNVKGELRIAEKLLKV
TAEKSVGLVSTEAVDKFAALQSSKNRQLEGVSGKKLSADLKAVESLSELADKAAERTD
DNIKVLPGDNKVIAGEGVRKEGALLARDVAPSRMAAANTSKFDDKEHKKIKEASQVPL
QPTTIADLSQLSGGDEKMPLAAQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVN
IQARQVGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQNPQQQQHGQQSGEEDD
A"
misc_feature 78735..79739
/locus_tag="SARI_00081"
/note="antigen presentation protein SpaN; Provisional;
Region: PRK15334"
/db_xref="CDD:185234"
misc_feature 78735..79739
/locus_tag="SARI_00081"
/note="Surface presentation of antigens protein; Region:
SPAN; pfam02510"
/db_xref="CDD:145575"
gene 79742..80653
/locus_tag="SARI_00082"
/db_xref="GeneID:5762075"
CDS 79742..80653
/locus_tag="SARI_00082"
/inference="protein motif:BlastProDom:IPR001543"
/inference="protein motif:HMMPfam:IPR001543"
/inference="protein motif:HMMTigr:IPR013385"
/inference="similar to AA sequence:INSD:AAC43944.1"
/note="involved in a secretory pathway responsible for the
surface presentation of determinants needed for the entry
of Salmonella species into mammalian cells"
/codon_start=1
/transl_table=11
/product="surface presentation of antigens protein SpaO"
/protein_id="YP_001569177.1"
/db_xref="GI:161502065"
/db_xref="InterPro:IPR001543"
/db_xref="InterPro:IPR013385"
/db_xref="GeneID:5762075"
/translation="MSLRVRQIDRREWLLTQTAAECQRNGQEVTLEYPSRQGMWVRLS
DSEKRWSAWIKPGDWLEHVSPALAGAAVSAGAEHLIVPWLAATERPFELPVPHLSYRR
LCVENPVPGSALPEGKLLHIMSDRGGLWFEHLPELPAVGGGRPKTLCWPLRFVIGSSD
SPRALLGRIGIGDVLVIRTSSAEVYCYTKKLGHFKRVEGGIIVETLDIQHIEEEKNET
ETAEILPGLSQLPVKLEFVLYRKQVTLADLEAIGQQQLLSLPTNAECNVEIMANGVLL
GNGELVQMNDTLGVEIHKWLSESGNGE"
misc_feature 79742..80650
/locus_tag="SARI_00082"
/note="type III secretion system protein SpaO; Validated;
Region: PRK08158"
/db_xref="CDD:181259"
misc_feature 80126..80626
/locus_tag="SARI_00082"
/note="Flagellar motor switch/type III secretory pathway
protein [Cell motility and secretion / Intracellular
trafficking and secretion]; Region: FliN; COG1886"
/db_xref="CDD:224798"
gene 80643..81317
/gene="spaP"
/locus_tag="SARI_00083"
/db_xref="GeneID:5762076"
CDS 80643..81317
/gene="spaP"
/locus_tag="SARI_00083"
/inference="protein motif:BlastProDom:IPR005838"
/inference="protein motif:FPrintScan:IPR005838"
/inference="protein motif:HMMPfam:IPR005838"
/inference="protein motif:HMMTigr:IPR005773"
/inference="protein motif:ScanRegExp:IPR005838"
/inference="similar to AA sequence:INSD:AAC43945.1"
/note="part of a type III secretory system probably
involved in invasion into eukaryotic cells"
/codon_start=1
/transl_table=11
/product="surface presentation of antigens protein SpaP"
/protein_id="YP_001569178.1"
/db_xref="GI:161502066"
/db_xref="InterPro:IPR005773"
/db_xref="InterPro:IPR005838"
/db_xref="GeneID:5762076"
/translation="MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQ
QIPSNMTLNGIALLLSMFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDY
LIKYSDRELVQFFENAQLKRQYGEETEAVKRDKDEIEKPSIFALLPAYALSEIKSAFK
IGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQ
YMDIAT"
misc_feature 80643..81314
/gene="spaP"
/locus_tag="SARI_00083"
/note="type III secretion system protein SpaP;
Provisional; Region: spaP; PRK12796"
/db_xref="CDD:237209"
gene 81343..81603
/locus_tag="SARI_00084"
/db_xref="GeneID:5762077"
CDS 81343..81603
/locus_tag="SARI_00084"
/inference="protein motif:FPrintScan:IPR002191"
/inference="protein motif:HMMPfam:IPR002191"
/inference="protein motif:HMMTigr:IPR006306"
/inference="similar to AA sequence:INSD:AAO70352.1"
/note="'COG: COG4794 Type III secretory pathway, component
EscS;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569179.1"
/db_xref="GI:161502067"
/db_xref="InterPro:IPR002191"
/db_xref="InterPro:IPR006306"
/db_xref="GeneID:5762077"
/translation="MDDLVFAGNKALYLVLILSGWPTIVATIIGLLVGLFQTVTQLQE
QTLPFGIKLLGVCLCLFLLSGWYGEVLLSYGRQVIFLALAKG"
misc_feature 81343..81600
/locus_tag="SARI_00084"
/note="type III secretion system protein SpaQ;
Provisional; Region: PRK15333"
/db_xref="CDD:185233"
gene 81607..82398
/locus_tag="SARI_00085"
/db_xref="GeneID:5762078"
CDS 81607..82398
/locus_tag="SARI_00085"
/inference="protein motif:FPrintScan:IPR002010"
/inference="protein motif:HMMPfam:IPR002010"
/inference="protein motif:HMMTigr:IPR006304"
/inference="similar to AA sequence:INSD:CAA51926.1"
/note="'COG: COG4791 Type III secretory pathway, component
EscT;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569180.1"
/db_xref="GI:161502068"
/db_xref="InterPro:IPR002010"
/db_xref="InterPro:IPR006304"
/db_xref="GeneID:5762078"
/translation="MFYALYFEIHNLVASAAMGFARVAPIFFFLPFLNSGVLSGAPRN
AIIVLVAMGVWPHELSEAPPFLSVAMIPLVLQEAAVGVMLGCLLSWPFWVMHALGCII
DNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPM
NECTPSLPPLLTFINQVAQHALVMASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTV
KSGIAILIMLLYFSPVLPDNVLRLSFQATGLSSWFYERGATHVLE"
misc_feature 81607..82395
/locus_tag="SARI_00085"
/note="type III secretion system protein SpaR;
Provisional; Region: PRK15332"
/db_xref="CDD:185232"
gene 82385..83455
/locus_tag="SARI_00086"
/db_xref="GeneID:5762079"
CDS 82385..83455
/locus_tag="SARI_00086"
/inference="protein motif:FPrintScan:IPR006135"
/inference="protein motif:HMMPfam:IPR006135"
/inference="protein motif:HMMTigr:IPR006307"
/inference="similar to AA sequence:INSD:CAA51927.1"
/note="Required for surface presentation of invasion
plasmid antigens; required for invasion and for secretion
of the three ipa proteins"
/codon_start=1
/transl_table=11
/product="surface presentation of antigens protein SpaS"
/protein_id="YP_001569181.1"
/db_xref="GI:161502069"
/db_xref="InterPro:IPR006135"
/db_xref="InterPro:IPR006307"
/db_xref="GeneID:5762079"
/translation="MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVS
YGSFNEFMGIIKIIIAENFEQSMADYSLAVLGVGLKYLIPFMLLCLVCSALPTLLQTG
FVLATEALKLNLSALNPVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEI
FSQLNGNVMGIAVIWRELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKR
EMKEQEGNPEVKSKRREVHMEILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPFP
MISVYETNQRALAVRSYAEKVGVPVIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLV
WLEEVENAGKDVIQPQENEVRH"
misc_feature 82388..83452
/locus_tag="SARI_00086"
/note="type III secretion system protein SpaS; Validated;
Region: PRK08156"
/db_xref="CDD:236168"
gene 83593..84090
/locus_tag="SARI_00087"
/db_xref="GeneID:5762080"
CDS 83593..84090
/locus_tag="SARI_00087"
/inference="protein motif:Gene3D:IPR011990"
/inference="protein motif:HMMPfam:IPR011716"
/inference="protein motif:HMMTigr:IPR005415"
/inference="similar to AA sequence:INSD:"
/note="'COG: COG0457 FOG: TPR repeat;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569182.1"
/db_xref="GI:161502070"
/db_xref="InterPro:IPR005415"
/db_xref="InterPro:IPR011716"
/db_xref="InterPro:IPR011990"
/db_xref="GeneID:5762080"
/translation="MDYQNNVSEERVAEMIWDAVSEGATLKDVHGIPQDMMDGLYAHA
YEFYNQGRLDEAETFFRFLCIYDFYNPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLK
NDYRPVFFTGQCQLLMRKAAKARQCFELVNERTEDESLRAKALVYLEALKTAETEQHN
EQEKE"
misc_feature 83593..84087
/locus_tag="SARI_00087"
/note="chaperone protein SicA; Provisional; Region:
PRK15331"
/db_xref="CDD:185231"
misc_feature 83701..83802
/locus_tag="SARI_00087"
/note="Tetratricopeptide repeat; Region: TPR_3; pfam07720"
/db_xref="CDD:219534"
misc_feature 83803..83904
/locus_tag="SARI_00087"
/note="Tetratricopeptide repeat; Region: TPR_3; pfam07720"
/db_xref="CDD:219534"
gene 84093..85877
/locus_tag="SARI_00088"
/db_xref="GeneID:5762081"
CDS 84093..85877
/locus_tag="SARI_00088"
/inference="protein motif:HMMPfam:IPR003895"
/inference="similar to AA sequence:INSD:AAO70348.1"
/note="'KEGG: pat:Patl_3134 0.0057 ATP-dependent protease
La K01338;
COG: NOG06175 non supervised orthologous group;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569183.1"
/db_xref="GI:161502071"
/db_xref="InterPro:IPR003895"
/db_xref="GeneID:5762081"
/translation="MVNDTSSVSRSGYTQNPRLAEAAFEGVRKNTDFLKAADKAFKDV
VATKAGDLKAGTKSGETTFNTVGLTPPTDAAREKLSSEGQLTLLLGKLMTLLGDVSLS
QLESRLAVWQAMIESQKAMGLQVSKEFQAALGEAEKATDIYEESIKKMDTAKSVYDTA
AKKLTQAQNKLQSMDPSDPGYAKAEAAEGQARKEAKDAKTAFDKAKKAADLAGTDAKT
KTEQADNILTKFQGTTNVVASQTEVAKGEKDNLSNVARLTMLMAMFIEIVGKNNEEGL
QNDLALFNALQEGRQAEMEKKSAEFQEETRKAEETNRIMGCIGKVLGALLTIVSVVAA
VFTGGASLALAAVGLAVMVADEIVKAATGVSFIQQALNPIMEHVLKPLMELIGKAITK
ALEGLGVDKKTAEMAGSIVGAIVAAIAMVAVIVVVAVVGKGAAAKLGNALSKMMGETI
KKLVPNVLKQLAQNGSKLFTQGMQRITSGLGNVGSKMGLQTNALSKELVGNTLNKVAL
GMEVTNTAAQSAGGVAEGVFIKNASEAIADFTLARFAMDQIQQWLKQSVEIFGENQKV
TAELQKVMSSAVQQNADASRFILRQSRA"
misc_feature 84093..85874
/locus_tag="SARI_00088"
/note="pathogenicity island 1 effector protein SipB;
Provisional; Region: PRK15374"
/db_xref="CDD:185272"
gene 85904..87133
/locus_tag="SARI_00089"
/db_xref="GeneID:5762082"
CDS 85904..87133
/locus_tag="SARI_00089"
/inference="protein motif:HMMTigr:IPR005427"
/inference="similar to AA sequence:SwissProt:Q56020"
/note="'COG: NOG10023 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569184.1"
/db_xref="GI:161502072"
/db_xref="InterPro:IPR005427"
/db_xref="GeneID:5762082"
/translation="MLINNAGINPATYLNNHSVENTPQPGSQSVSVKDILSSIGITVS
KVSDLGLSPTLTAPAPGVLTQTPGTVTSFLKTSIQNADMNQDLNALANNFSNKANELV
QTHLREQQAEVGKFFDISGMSSNAVALLAAANVLMLTLNQADTQLSSKLSLVSFDAAK
TTASSMMREGMNALSGSISQSALQMGITTVGAKLEYKGLQNERGALKHNAAKIDKLTT
ESHSIKNVLNGQNSVKLGSEGVDSLKSLNMKKTGADATKNLNDVTLKSNAGTSATESL
GIKDSNKQISPEHQAILSKRLESVESDIRLEQNTMDMTRIDARKMQMTGDLIMKNSVT
VGGIAGASGQYAAIQERSEQQISQVNNRVASTASEETRESSRKSTSLIQEMLKAMESI
NQSKASAFAAIAGNIRA"
misc_feature 85904..87130
/locus_tag="SARI_00089"
/note="pathogenicity island 1 effector protein SipC;
Provisional; Region: PRK15373"
/db_xref="CDD:185271"
gene 87204..88226
/locus_tag="SARI_00090"
/db_xref="GeneID:5762083"
CDS 87204..88226
/locus_tag="SARI_00090"
/inference="protein motif:HMMPfam:IPR009483"
/inference="protein motif:HMMTigr:IPR013386"
/inference="similar to AA sequence:INSD:CAD05990.1"
/note="'COG: NOG06173 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569185.1"
/db_xref="GI:161502073"
/db_xref="InterPro:IPR009483"
/db_xref="InterPro:IPR013386"
/db_xref="GeneID:5762083"
/translation="MLNIQNYSASPRPGLVAERPQTTSASEHVEITAAPATTEHRGAD
IITLSQAATKAQQAQQTLRSTLPVSEENNDERTLARQQLTSSLHALTKSGVSLSAEQN
EGLRSAFSAPAVALFSTAPMAQPRVTISDAEIWDMVSQNISAIGDNYLGVYENVVAVY
TDFYQAFSDILSKMGTWLAPGKDGNTVKLNVDALKSEIRSLVNKYNQVTKNTILFPSQ
TGSGVTTATKAEAEQWIKELNLPGSCLKASGSGYVVLVDTGPLNKMVSDLNGIGSGSA
LELDNAKYQAWQAGFKAQEENLKTTLQTLTQKYSNANSLYDNLVKVLSSTISSSLETA
KSFLQG"
misc_feature 87204..88223
/locus_tag="SARI_00090"
/note="cell invasion protein SipD; Provisional; Region:
PRK15330"
/db_xref="CDD:185230"
gene 88279..90261
/locus_tag="SARI_00091"
/db_xref="GeneID:5762084"
CDS 88279..90261
/locus_tag="SARI_00091"
/inference="similar to AA sequence:REFSEQ:YP_217801.1"
/note="'KEGG: ddi:DDB0184245 5.8e-05 hypothetical protein
K03654;
COG: NOG06172 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569186.1"
/db_xref="GI:161502074"
/db_xref="GeneID:5762084"
/translation="MMTGLQNEIKAQATNLAANISAVNGNAAKTLSGEIKGPQLEDFP
ALVKQSSLEALFKCGKDADALKEIFTSSSNVGAKRAVTEFAELFHSALKATSDSPAAK
ELLMKVGKEYTEQIMNDGLKEKSAFGPWTPKTDKAEAKLEILHNKLLDIIKNNIGGDL
GNLSTQFVMHEVMPYITNCIEHQFGCTLDPLTRSNIAQLVDKAAKKAVDALDMCHQKL
TQEQGTSVGREARHLEMKALIPMLLRNVFAQIPADKLPDPKIPEPAAGPVPDGGKKPE
SAGINININIDSSKHSVDNSKHINNSRSHVDNSQHHNDNSNHDNSQRHYESHYSNTSS
SVNHSHSRVDANTHQTETAHSASKGILDQGIMGKIDVTAHATAEAVTNASAESSGGKV
VTSEKGTTGETASFDEVDGGDNKVIIGKPMQATVHGVAGNKEQIQTADTVNVKTLASQ
LPDVEDVKIHTLQPETTVNTGNKAGTTDNDNSQADKAGQFSGLKFKQNGFLSAIPSVT
NMRSMHFDARETFLGVIRKALEPDTSTPFPVRRAFDGLRAEILSNDSIKSAALKAQCS
DINKHPELKVKIDTLKEAITLHPQREKLAEVALQFAREAGLTKLKGETDYLLSTMLDG
IIGDVSWRNGPSFESYLNKPGVDRVITTVDGLHMQS"
misc_feature 88291..90258
/locus_tag="SARI_00091"
/note="pathogenicity island 1 effector protein SipA;
Provisional; Region: PRK15376"
/db_xref="CDD:185274"
gene 90280..90528
/locus_tag="SARI_00092"
/db_xref="GeneID:5762085"
CDS 90280..90528
/locus_tag="SARI_00092"
/inference="protein motif:BlastProDom:IPR003231"
/inference="protein motif:Gene3D:IPR009081"
/inference="protein motif:HMMPfam:IPR006163"
/inference="protein motif:superfamily:IPR009081"
/inference="similar to AA sequence:INSD:AAO70344.1"
/note="carries the fatty acid chain in fatty acid
biosynthesis"
/codon_start=1
/transl_table=11
/product="acyl carrier protein"
/protein_id="YP_001569187.1"
/db_xref="GI:161502075"
/db_xref="InterPro:IPR003231"
/db_xref="InterPro:IPR006163"
/db_xref="InterPro:IPR009081"
/db_xref="GeneID:5762085"
/translation="MDMDIESRVKKVITSCIAVEINSINGQTNLVEDLYADSLDLIDI
VFGLSEEFDISCNENDLPDMTTITDICRVVEKSLQSRG"
misc_feature 90280..90525
/locus_tag="SARI_00092"
/note="putative acyl carrier protein IacP; Validated;
Region: PRK08172"
/db_xref="CDD:181266"
gene 90572..90823
/locus_tag="SARI_00093"
/db_xref="GeneID:5762086"
CDS 90572..90823
/locus_tag="SARI_00093"
/inference="similar to AA sequence:REFSEQ:NP_806483.1"
/note="'COG: NOG30285 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569188.1"
/db_xref="GI:161502076"
/db_xref="GeneID:5762086"
/translation="MKIITHVVPGSDMAEIYDDIADNSRLIIKSKLRHVENDPKELLI
CVPTRSEWLFYWIKGDKHCARRRAYKNIKHYVSKIKPKN"
gene 90858..91250
/locus_tag="SARI_00094"
/db_xref="GeneID:5762087"
CDS 90858..91250
/locus_tag="SARI_00094"
/inference="protein motif:HMMPfam:IPR010261"
/inference="similar to AA sequence:PDB:1JYO"
/note="'COG: NOG23656 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569189.1"
/db_xref="GI:161502077"
/db_xref="InterPro:IPR010261"
/db_xref="GeneID:5762087"
/translation="MRTHHDIIADIGEELGLPLTFDDNNQCLLLLDTDIFMAIEAKDD
IWLLNGMIIPLSPVCGDSVWRQIMMINGELATKNEGTLAYIDTAETLLFIKAITELAN
MYHIISQLESFVNQQEALKKRLQEYAKV"
misc_feature 90858..91247
/locus_tag="SARI_00094"
/note="chaperone protein SicP; Provisional; Region:
PRK15329"
/db_xref="CDD:237945"
gene 91300..92142
/locus_tag="SARI_00095"
/db_xref="GeneID:5763338"
CDS 91300..92142
/locus_tag="SARI_00095"
/inference="protein motif:HMMPfam:IPR003537"
/inference="protein motif:superfamily:IPR011070"
/inference="similar to AA sequence:INSD:CAD05985.1"
/note="'COG: NOG11499 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569190.1"
/db_xref="GI:161502078"
/db_xref="InterPro:IPR003537"
/db_xref="InterPro:IPR011070"
/db_xref="GeneID:5763338"
/translation="MTSNTRLYIAKENTNEAHVAPEKFASKVLTWLGRVPLFKNIDAV
QKHMENTRVQNQKTLQVFLKALTEKYDEKSVNAITLMAGLNDSIKPFTPVRLQQITQM
VKDAEESFSKDIRSKQNASLPKVFSLVAKGVETKVTEQNGDFGTGMTQLLLDIALNGV
KRAIPQLEKVDGNSLRKNFREMASGNGPLRTLMTNLQNLSLVPEVKQLNDYAINLKNI
QVGTAPFSQWGTCGGEVARWIDKASDQELTLAAKKIQVIVEKLKYVATELENIKAGAP
MSQR"
misc_feature 91357..91602
/locus_tag="SARI_00095"
/note="SicP binding; Region: SicP-binding; pfam09119"
/db_xref="CDD:117677"
misc_feature 91741..92085
/locus_tag="SARI_00095"
/note="GTPase-activating protein (GAP) domain found in
bacterial cytotoxins, ExoS, SptP, and YopE. Part of
protein secretion system; stimulates Rac1- dependent
cytoskeletal changes that promote bacterial
internalization; Region: ToxGAP; cd00219"
/db_xref="CDD:119405"
misc_feature order(91783..91785,91849..91857,91870..91872,91879..91881)
/locus_tag="SARI_00095"
/note="switch II binding region; other site"
/db_xref="CDD:119405"
misc_feature order(91852..91854,91867..91869)
/locus_tag="SARI_00095"
/note="Rac1 P-loop interaction site [polypeptide binding];
other site"
/db_xref="CDD:119405"
misc_feature order(91867..91869,91987..91995)
/locus_tag="SARI_00095"
/note="GTP binding residues [chemical binding]; other
site"
/db_xref="CDD:119405"
misc_feature order(91867..91869,91879..91881,91978..91980)
/locus_tag="SARI_00095"
/note="switch I binding region; other site"
/db_xref="CDD:119405"
gene complement(92471..92953)
/locus_tag="SARI_00096"
/db_xref="GeneID:5763339"
CDS complement(92471..92953)
/locus_tag="SARI_00096"
/inference="protein motif:HMMPfam:IPR008258"
/inference="similar to AA sequence:SwissProt:P43018"
/note="'KEGG: bba:Bd1285 1.8e-07 soluble lytic murein
transglycosylase K01238;
COG: COG0741 Soluble lytic murein transglycosylase and
related regulatory proteins (some contain LysM/invasin
domains);
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="cell invasion protein"
/protein_id="YP_001569191.1"
/db_xref="GI:161502079"
/db_xref="InterPro:IPR008258"
/db_xref="GeneID:5763339"
/translation="MRYFFSIVIWLISINTAWADCWLQAEKMFNIESELLYAIAQQES
AMKPGAIGHNRDGSTDIGLMQINSSHMKRLKKMGISEKQLLQDPCISVIVGASILSDM
MKIYGYSWEAVGAYNAGTSPQRADIRKRYAKKIWENYKKLKEMPAEEKNKKLSIALNK
"
misc_feature complement(92519..>92917)
/locus_tag="SARI_00096"
/note="Soluble lytic murein transglycosylase and related
regulatory proteins (some contain LysM/invasin domains)
[Cell envelope biogenesis, outer membrane]; Region: MltE;
COG0741"
/db_xref="CDD:223812"
misc_feature complement(92534..92854)
/locus_tag="SARI_00096"
/note="Lytic Transglycosylase (LT) and Goose Egg White
Lysozyme (GEWL) domain. Members include the soluble and
insoluble membrane-bound LTs in bacteria, the LTs in
bacteriophage lambda, as well as, the eukaryotic
'goose-type' lysozymes (GEWL). LTs...; Region: LT_GEWL;
cd00254"
/db_xref="CDD:238157"
misc_feature complement(order(92606..92608,92660..92662,92753..92755,
92825..92827))
/locus_tag="SARI_00096"
/note="N-acetyl-D-glucosamine binding site [chemical
binding]; other site"
/db_xref="CDD:238157"
misc_feature complement(92825..92827)
/locus_tag="SARI_00096"
/note="catalytic residue [active]"
/db_xref="CDD:238157"
gene complement(92971..94632)
/locus_tag="SARI_00097"
/db_xref="GeneID:5763340"
CDS complement(92971..94632)
/locus_tag="SARI_00097"
/inference="protein motif:BlastProDom:IPR001867"
/inference="protein motif:Gene3D:IPR011990"
/inference="protein motif:Gene3D:IPR011991"
/inference="protein motif:HMMPfam:IPR001867"
/inference="protein motif:HMMPfam:IPR013105"
/inference="similar to AA sequence:REFSEQ:NP_461797.1"
/note="Activates the expression of invasion genes and
activates the expression of prgHIJK which is part of the
pathogenicity island 1 type III secretion system"
/codon_start=1
/transl_table=11
/product="invasion protein regulator"
/protein_id="YP_001569192.1"
/db_xref="GI:161502080"
/db_xref="InterPro:IPR001867"
/db_xref="InterPro:IPR011990"
/db_xref="InterPro:IPR011991"
/db_xref="InterPro:IPR013105"
/db_xref="GeneID:5763340"
/translation="MLHFNSVPVSNKKFVFDDFILNMDGSLLRADKKVNIPPKEYAVL
VILLEAAGEIVSKNTLLDQVWGDAEVNEESLTRCIYALRRILSEDKEHRYIETLYGQG
YRFNRPVVVVSPPAPQPTTHTLAILPFQMQDQIQSESLHYSIVKGLSQYAPFGLSVLP
VTITKNCRSVKDILELMDQLRPDYYISGQMIPDGNDNVVQIEIVRVKGYNLLHQESIK
LVENQPASLLQNKIANLLLRCIPGLRWDTKQVSELNSIDSTMVYLRGKHELNQYTPYS
LQQALKLLTQCVNMSPNSIAPYCALAECYLSMAQMGIFDKQNAMIKAKEYAIKATELD
HSNPQALGFLGLINTIHSEYIVGSLLFKQANLLSPVSADIKYYYGWNLFMAGQLEEAL
QTINECLKLEPTRAAAGITKLWITYYHAGIDDAIRLGDELRSQHLQDNPILLSMQVMF
LSLKGKHELARKLAKEISKHEITGLIAVNLLYAEYCQNSERALPAIREFLESEQNTDN
NPGLLPLVLVAHGEVIAEKMWNKFKKEDNIWFKRWKQDPRLVKLR"
misc_feature complement(92974..94632)
/locus_tag="SARI_00097"
/note="invasion protein regulator; Provisional; Region:
PRK12370"
/db_xref="CDD:237080"
misc_feature complement(94318..94593)
/locus_tag="SARI_00097"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:238225"
misc_feature complement(order(94327..94329,94342..94344,94375..94380,
94402..94404,94411..94413,94462..94467,94522..94524))
/locus_tag="SARI_00097"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238225"
misc_feature complement(93421..93741)
/locus_tag="SARI_00097"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:238112"
misc_feature complement(order(93478..93483,93490..93495,93502..93507,
93583..93588,93595..93600,93604..93609,93721..93726,
93733..93738))
/locus_tag="SARI_00097"
/note="binding surface"
/db_xref="CDD:238112"
misc_feature complement(order(93439..93441,93448..93450,93460..93462,
93496..93498,93541..93543,93550..93552,93562..93564,
93598..93600,93643..93645,93652..93654,93664..93666,
93727..93729))
/locus_tag="SARI_00097"
/note="TPR motif; other site"
/db_xref="CDD:238112"
gene complement(95733..96662)
/locus_tag="SARI_00098"
/db_xref="GeneID:5763341"
CDS complement(95733..96662)
/locus_tag="SARI_00098"
/inference="protein motif:FPrintScan:IPR000005"
/inference="protein motif:Gene3D:IPR012287"
/inference="protein motif:HMMPfam:IPR000005"
/inference="protein motif:HMMSmart:IPR000005"
/inference="protein motif:ScanRegExp:IPR000005"
/inference="protein motif:superfamily:IPR009057"
/inference="similar to AA sequence:INSD:AAX66713.1"
/note="'KEGG: bli:BL05281 0.0021 adaA;
methylphosphotriester-DNA alkyltransferase and
transcriptional regulator (AraC/XylS family) K00567;
COG: COG2207 AraC-type DNA-binding domain-containing
proteins;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569193.1"
/db_xref="GI:161502081"
/db_xref="InterPro:IPR000005"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR012287"
/db_xref="GeneID:5763341"
/translation="MENVTFVSNSHQRPAADNLQKLKSLLTNTQQQIKSQTQQITIKN
LYVSSFTLVCFRSGKVTISNNHDTIYCEEPGMLVLKKEQVVNVTLEEVNGHMDFDILE
IPTQRLGDLYALIPNEQQTKMVKPVEKVQKIFYTPDFPARREVFEHLKTAFSCTMDTN
KSCNSCNNQSCIENEELIPYFLLFLLTAFLRLPESYEIILSSAQITLKERVYNIISSS
PGRQWKLPDIADNIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNSV
ALKCGYDSTSYFIQCFKKYFKTTPSTFIKMANH"
misc_feature complement(95736..96662)
/locus_tag="SARI_00098"
/note="transcriptional regulator HilD; Provisional;
Region: PRK15185"
/db_xref="CDD:185107"
misc_feature complement(95748..95855)
/locus_tag="SARI_00098"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:215763"
gene 96978..98156
/locus_tag="SARI_00099"
/db_xref="GeneID:5763342"
CDS 96978..98156
/locus_tag="SARI_00099"
/inference="protein motif:HMMTigr:IPR013387"
/inference="similar to AA sequence:REFSEQ:YP_151901.1"
/note="'COG: NOG07990 non supervised orthologous group;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569194.1"
/db_xref="GI:161502082"
/db_xref="InterPro:IPR013387"
/db_xref="GeneID:5763342"
/translation="METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGHSD
ALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDAAEIILHELKEGKAESRPVQLNTP
IQVGELLILIRPESEPWAPEQPKSLEASAKKIEPRFKNGIVAALAGLFILGLGTVGTL
WILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDK
NARVINENEENKRISTWLDTYYPQLAYYRLHFDEPRKPVFWLSRQRNNMSKKEIEVLS
QKLRTLMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHKGGVTFVIQGALDDV
EILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL
"
misc_feature 96978..98150
/locus_tag="SARI_00099"
/note="type III secretion system needle complex protein
PrgH; Provisional; Region: PRK15327"
/db_xref="CDD:237944"
misc_feature 97020..98141
/locus_tag="SARI_00099"
/note="Type III secretion system protein PrgH-EprH (PrgH);
Region: PrgH; pfam09480"
/db_xref="CDD:220257"
gene 98180..98419
/locus_tag="SARI_00100"
/db_xref="GeneID:5763343"
CDS 98180..98419
/locus_tag="SARI_00100"
/inference="protein motif:HMMTigr:IPR011841"
/inference="protein motif:superfamily:IPR010978"
/inference="similar to AA sequence:REFSEQ:NP_457267.1"
/note="'COG: NOG13860 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569195.1"
/db_xref="GI:161502083"
/db_xref="InterPro:IPR010978"
/db_xref="InterPro:IPR011841"
/db_xref="GeneID:5763343"
/translation="MADWSGYLDEVSAKFDKGVDDLQEQVTKALDQLAAKPSDPALLA
AYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR"
misc_feature 98189..98416
/locus_tag="SARI_00100"
/note="type III secretion system needle complex protein
PrgI; Provisional; Region: PRK15326"
/db_xref="CDD:185226"
gene 98438..98743
/locus_tag="SARI_00101"
/db_xref="GeneID:5763344"
CDS 98438..98743
/locus_tag="SARI_00101"
/inference="similar to AA sequence:REFSEQ:NP_457266.1"
/note="'COG: NOG19625 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569196.1"
/db_xref="GI:161502084"
/db_xref="GeneID:5763344"
/translation="MPIATIVPTNAVIGQAVNIRPMETDIVSLDDRLLQAFSGSAIAT
AVDKQTITNRIEDPNLVTDPKELAISQEMISDYNLYVSMVSTLTRKGVGAVETLLRS"
misc_feature 98501..98740
/locus_tag="SARI_00101"
/note="type III secretion system needle complex protein
PrgJ; Provisional; Region: PRK15325"
/db_xref="CDD:185225"
gene 98740..99498
/locus_tag="SARI_00102"
/db_xref="GeneID:5763345"
CDS 98740..99498
/locus_tag="SARI_00102"
/inference="protein motif:HMMPfam:IPR006182"
/inference="protein motif:HMMTigr:IPR003282"
/inference="similar to AA sequence:SwissProt:P41786"
/note="'COG: COG4669 Type III secretory pathway,
lipoprotein EscJ;
Psort location: golgi, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569197.1"
/db_xref="GI:161502085"
/db_xref="InterPro:IPR003282"
/db_xref="InterPro:IPR006182"
/db_xref="GeneID:5763345"
/translation="MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNI
EANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPRPRVEIAQMFPADSLVSSPRAEK
ARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPL
AHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRDSFATSWIVLIILL
SAMLAGFGIWYYKNHYARNKKGITADDKAKSSNE"
misc_feature 98740..99495
/locus_tag="SARI_00102"
/note="type III secretion system lipoprotein PrgK;
Provisional; Region: PRK15324"
/db_xref="CDD:185224"
gene 99491..100069
/locus_tag="SARI_00103"
/db_xref="GeneID:5763346"
CDS 99491..100069
/locus_tag="SARI_00103"
/inference="protein motif:HMMTigr:IPR013388"
/inference="similar to AA sequence:INSD:AAL21750.1"
/note="'COG: NOG14693 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569198.1"
/db_xref="GI:161502086"
/db_xref="InterPro:IPR013388"
/db_xref="GeneID:5763346"
/translation="MNRQPLSVIWQKVIFDPLSYIHPQRLQITSEMIDRPAARAAANE
LILAACQLKTGEKENIQNSLTQLWLRQWHRLPQIAYLLGCYKLRADLARQGALLGLPD
WAQAFLAMNQGTSLSVCDKAPNHRFLLSVGYAQLNALSEFLPESLAQRFPLLFPPFIE
EASKQDAVEMSILLLALQYAQKYPNSVPAFAC"
misc_feature 99518..100066
/locus_tag="SARI_00103"
/note="type III secretion apparatus protein OrgA/MxiK;
Region: OrgA_MxiK; TIGR02555"
/db_xref="CDD:131606"
misc_feature 99566..100066
/locus_tag="SARI_00103"
/note="invasion protein OrgA; Provisional; Region:
PRK15323"
/db_xref="CDD:185223"
gene 100026..100697
/locus_tag="SARI_00104"
/db_xref="GeneID:5763347"
CDS 100026..100697
/locus_tag="SARI_00104"
/inference="similar to AA sequence:REFSEQ:YP_217788.1"
/note="'COG: NOG14128 non supervised orthologous group;
Psort location: cytoskeletal, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569199.1"
/db_xref="GI:161502087"
/db_xref="GeneID:5763347"
/translation="MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRI
LREAEEEARTLRMYAYQEGYEQGMVDALQQVAAYLTDSQTMAWKWMEKIQIYARELFS
AAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKY
HQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAINSLIDEWQT
KTQTS"
misc_feature 100074..100688
/locus_tag="SARI_00104"
/note="invasion protein OrgB; Provisional; Region:
PRK15322"
/db_xref="CDD:185222"
gene 100712..101170
/locus_tag="SARI_00105"
/db_xref="GeneID:5763348"
CDS 100712..101170
/locus_tag="SARI_00105"
/inference="similar to AA sequence:REFSEQ:YP_151895.1"
/note="'COG: NOG23015 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569200.1"
/db_xref="GI:161502088"
/db_xref="GeneID:5763348"
/translation="MIPGTISTSYLDPTVSTEATSNSVVSLNARAVTLNNANNAHLSN
GSNVDLYDAFYQTLLSLPELVSSEALKDTIYQEMNAFKDPKNGEPAFVSFEQQTAMLQ
NIIGKVEPDTHLYEALNGVLVGTMNAQSQMTSWMQEVILSGGENNESIDW"
misc_feature 100808..101167
/locus_tag="SARI_00105"
/note="putative type III secretion system effector protein
OrgC; Provisional; Region: PRK15321"
/db_xref="CDD:185221"
gene 101533..102405
/locus_tag="SARI_00106"
/db_xref="GeneID:5763349"
CDS 101533..102405
/locus_tag="SARI_00106"
/inference="protein motif:Gene3D:IPR012287"
/inference="protein motif:HMMPfam:IPR000005"
/inference="protein motif:HMMSmart:IPR000005"
/inference="protein motif:ScanRegExp:IPR000005"
/inference="protein motif:superfamily:IPR009057"
/inference="similar to AA sequence:REFSEQ:YP_217786.1"
/note="'COG: COG2207 AraC-type DNA-binding
domain-containing proteins;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569201.1"
/db_xref="GI:161502089"
/db_xref="InterPro:IPR000005"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR012287"
/db_xref="GeneID:5763349"
/translation="MNKSVGAISNNYLQQSSKASLINGLADVRGYYVANCLLIKLNKG
SLRIENEFGEFIEQSAPCLFLLEKDQTITFSMSEIEGHIDFSSLEVSYDLMQKFYKVF
YSTINYNDRELSLKTKPKHFFHAELLPGMSDTFDSILNGVTCPRVCSNVSIDDHDYSY
YSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNIIISDITRKWSQAEVAGKLFMSVS
SLKRKLAAEDVSFSKIYLDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRH
FKITPLSFMRTINH"
misc_feature 101533..102402
/locus_tag="SARI_00106"
/note="transcriptional regulator SirC; Provisional;
Region: PRK15044"
/db_xref="CDD:185004"
misc_feature <102289..102390
/locus_tag="SARI_00106"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:215763"
gene 102786..103541
/locus_tag="SARI_00107"
/db_xref="GeneID:5763350"
CDS 102786..103541
/locus_tag="SARI_00107"
/inference="protein motif:Gene3D:IPR011991"
/inference="similar to AA sequence:INSD:CAD05973.1"
/note="'COG: NOG25264 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569202.1"
/db_xref="GI:161502090"
/db_xref="InterPro:IPR011991"
/db_xref="GeneID:5763350"
/translation="MKNVIIYGINWTNCYALESIFKQKYPEKRVKTCNSLTALLHSIS
AMPDAGLILSLNPHEHVYLFHALQSRLQSRKVLVVADRLYYIDRCVLQYFGVMDYVLK
DELSCIIRPDREKPRLPEAWLRFCHRPHRKTVATTYAFNVNETPEEVLFNINQYAWWN
LPPGVTQAKYALLILLSSGHPAIELAKKFGLGTKTVSIYRKKMMHRLGMDSSPLSLFR
GLKLDAHLQRTTVAHNRSVQDDNCPLPVAVGMN"
misc_feature 102786..103538
/locus_tag="SARI_00107"
/note="transcriptional activator SprB; Provisional;
Region: PRK15320"
/db_xref="CDD:185220"
misc_feature 103269..103460
/locus_tag="SARI_00107"
/note="DNA-binding HTH domain-containing proteins
[Transcription]; Region: CsgD; COG2771"
/db_xref="CDD:225360"
gene complement(103823..104671)
/locus_tag="SARI_00108"
/db_xref="GeneID:5763351"
CDS complement(103823..104671)
/locus_tag="SARI_00108"
/inference="protein motif:HMMPfam:IPR001626"
/inference="similar to AA sequence:INSD:AAL21744.1"
/note="'COG: COG1108 ABC-type Mn2+/Zn2+ transport systems,
permease components;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569203.1"
/db_xref="GI:161502091"
/db_xref="InterPro:IPR001626"
/db_xref="GeneID:5763351"
/translation="MFLTTLLEPFQFDFMVNALMVSVIVSIPCALLSVFLVLKGWALM
GDAMSHAVFPGVVLAYIVGIPLAIGAFIAGLFCAIATGYLDENSRIKRDTVMGIVFSG
MFGAGLVLYVSIQSEVHLDHILFGDMLGVSLGDIMQTAIIALGIALIIGLKWKDLLLY
AFDPHQAKACGLNTTLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILLTRR
FARALGLAVSLSVITAFAGVYLSFYFDSAPAPTIVVLFAIVFIAAFIYSTWRDRRNEV
VPEAHG"
misc_feature complement(103850..104656)
/locus_tag="SARI_00108"
/note="ABC-type Mn2+/Zn2+ transport systems, permease
components [Inorganic ion transport and metabolism];
Region: ZnuB; COG1108"
/db_xref="CDD:224033"
misc_feature complement(103880..104629)
/locus_tag="SARI_00108"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cd06550"
/db_xref="CDD:119348"
misc_feature complement(order(104015..104017,104036..104038,
104162..104170,104174..104191,104195..104200,
104204..104212,104216..104221,104555..104563,
104573..104575))
/locus_tag="SARI_00108"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
misc_feature complement(order(103880..103882,103889..103894,
103901..103903,103910..103915,103922..103924,
104066..104068,104297..104299,104306..104311,
104342..104347,104354..104356,104363..104368,
104375..104380,104387..104392,104396..104398,
104537..104539,104552..104554,104558..104560))
/locus_tag="SARI_00108"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature complement(order(103931..103933,103946..103948,
104078..104080,104093..104095,104267..104269))
/locus_tag="SARI_00108"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
gene complement(104662..105522)
/locus_tag="SARI_00109"
/db_xref="GeneID:5763352"
CDS complement(104662..105522)
/locus_tag="SARI_00109"
/inference="protein motif:HMMPfam:IPR001626"
/inference="similar to AA sequence:INSD:AAV78578.1"
/note="'COG: COG1108 ABC-type Mn2+/Zn2+ transport systems,
permease components;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569204.1"
/db_xref="GI:161502092"
/db_xref="InterPro:IPR001626"
/db_xref="GeneID:5763352"
/translation="MNWLVEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGD
ALSHSIVPGVAGAWMLGLPFSLGAFLSGGLAAGSMLFLNQRSRLKEDAIIGLIFSSFF
GVGLFMVSLNPMSVNIQTIILGNVLAIAPADIVQLAIIGVVSLTILLLKWKDLMVVFF
DETHARSIGLNPGLLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFP
RLLVIAVMIGSLTSFLGAWLSYWLDGATGGIIVVMQTLLFITAFIFAPKHGLLANRRR
ARLHKEPSCS"
misc_feature complement(104707..105522)
/locus_tag="SARI_00109"
/note="ABC-type Mn2+/Zn2+ transport systems, permease
components [Inorganic ion transport and metabolism];
Region: ZnuB; COG1108"
/db_xref="CDD:224033"
misc_feature complement(104746..105486)
/locus_tag="SARI_00109"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cd06550"
/db_xref="CDD:119348"
misc_feature complement(order(104872..104874,104893..104895,
105019..105027,105031..105048,105052..105057,
105061..105069,105073..105078,105412..105420,
105430..105432))
/locus_tag="SARI_00109"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
misc_feature complement(order(104746..104751,104758..104760,
104767..104772,104779..104781,104926..104928,
105154..105156,105163..105168,105193..105195,
105199..105204,105211..105213,105220..105225,
105232..105237,105244..105249,105253..105255,
105394..105396,105409..105411,105415..105417))
/locus_tag="SARI_00109"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature complement(order(104788..104790,104803..104805,
104938..104940,104950..104952,105124..105126,
105193..105195))
/locus_tag="SARI_00109"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
gene complement(105519..106340)
/locus_tag="SARI_00110"
/db_xref="GeneID:5763353"
CDS complement(105519..106340)
/locus_tag="SARI_00110"
/inference="protein motif:BlastProDom:IPR003439"
/inference="protein motif:HMMPfam:IPR003439"
/inference="protein motif:HMMSmart:IPR003593"
/inference="protein motif:ScanRegExp:IPR003439"
/inference="similar to AA sequence:INSD:AAL21742.1"
/note="'KEGG: rru:Rru_A2894 2.6e-85 ABC transporter
component K02074;
COG: COG1121 ABC-type Mn/Zn transport systems, ATPase
component;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569205.1"
/db_xref="GI:161502093"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:5763353"
/translation="MSQSAITVDQVTVTYRNGHTALRDATFQVPGGTIAALVGVNGSG
KSTLFKALMGFVHLAQGDITILQQSVNTALKKNLIAYVPQSEEVDWSFPVLVEDVVMM
GRYGHMGWLRRPTAHDHACVDAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
QVILLDEPFTGVDVKTEARIIDLLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTV
LASGPTETTFTAANLEQAFSGVLRHIALSGGEEHIITDDERPFISRRVASGGKSS"
misc_feature complement(105528..106340)
/locus_tag="SARI_00110"
/note="manganese/iron transporter ATP-binding protein;
Provisional; Region: PRK15056"
/db_xref="CDD:185016"
misc_feature complement(105675..106319)
/locus_tag="SARI_00110"
/note="ATP-binding cassette domain of the metal-type
transporters; Region: ABC_Metallic_Cations; cd03235"
/db_xref="CDD:213202"
gene complement(106337..107254)
/locus_tag="SARI_00111"
/db_xref="GeneID:5763354"
CDS complement(106337..107254)
/locus_tag="SARI_00111"
/inference="protein motif:HMMPfam:IPR006127"
/inference="similar to AA sequence:INSD:AAL21741.1"
/note="'COG: COG0803 ABC-type metal ion transport system,
periplasmic component/surface adhesin;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569206.1"
/db_xref="GI:161502094"
/db_xref="InterPro:IPR006127"
/db_xref="GeneID:5763354"
/translation="MTNLRRLKTLLIVGIVAMLALSSAYAKEKFKVITTFTVIADMAK
NVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGLNLERWFARFYQHLSG
VPEVVVSTGVKPMGITEGPYNGKPNPHAWMSAENALIYVDNIRDALVKYDPDNAEIYK
QNAERYKAKIRQLADPLRAELEKIPADQRWLVTSEGAFSYLARDNNMKELYLWPINAD
QQGTPKQVRKVIDTIKKHHIPAIFSESTVSDKPARQVAREAGAHYGGVLYVDSLSAAD
GPVPTYLDLLRVTTETIVKGINDGLRSQQ"
misc_feature complement(106361..107242)
/locus_tag="SARI_00111"
/note="ABC-type metal ion transport system, periplasmic
component/surface adhesin [Inorganic ion transport and
metabolism]; Region: LraI; COG0803"
/db_xref="CDD:223874"
misc_feature complement(106361..107206)
/locus_tag="SARI_00111"
/note="Metal binding protein PsaA. These proteins have
been shown to function as initial receptors in ABC
transport of Mn2+ and as surface adhesins in some
eubacterial species. They belong to the TroA superfamily
of periplasmic metal binding proteins that...; Region:
PsaA; cd01137"
/db_xref="CDD:238557"
misc_feature complement(order(106445..106447,106670..106672,
106868..106870,107063..107065))
/locus_tag="SARI_00111"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238557"
gene 107436..107780
/locus_tag="SARI_00112"
/db_xref="GeneID:5763355"
CDS 107436..107780
/locus_tag="SARI_00112"
/inference="similar to AA sequence:INSD:AAL21740.1"
/note="'COG: NOG16835 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569207.1"
/db_xref="GI:161502095"
/db_xref="GeneID:5763355"
/translation="MSGNRIAREKLTIKKMIALYASRCPQASNDEAHYDALFSYAQKR
LDKCVFGEDKPACKQCPVHCYQPTRREEMKQIMRWAGPRMLWRHPVLTVRHFIDDKRP
VPELPEKYQRKK"
misc_feature 107442..107771
/locus_tag="SARI_00112"
/note="Nitrous oxide-stimulated promoter; Region: YgbA_NO;
pfam11756"
/db_xref="CDD:221209"
gene complement(107856..109919)
/locus_tag="SARI_00113"
/db_xref="GeneID:5763356"
CDS complement(107856..109919)
/locus_tag="SARI_00113"
/inference="protein motif:FPrintScan:IPR002197"
/inference="protein motif:Gene3D:IPR012287"
/inference="protein motif:HMMPfam:IPR002078"
/inference="protein motif:HMMPfam:IPR002197"
/inference="protein motif:HMMPfam:IPR003018"
/inference="protein motif:HMMSmart:IPR003018"
/inference="protein motif:HMMSmart:IPR003593"
/inference="protein motif:ScanRegExp:IPR002078"
/note="'KEGG: eci:UTI89_C3094 0. fhlA; formate
hydrogenlyase transcriptional activator K01768;
COG: COG3604 Transcriptional regulator containing GAF,
AAA-type ATPase, and DNA binding domains;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569208.1"
/db_xref="GI:161502096"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR002197"
/db_xref="InterPro:IPR003018"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR012287"
/db_xref="GeneID:5763356"
/translation="MSDLGQQGLFDITRTLLQQPDLASLSEALSQLVKRSALADSAGI
VLWQAQSQRAQYYATRENGRPVEYEDETVLAHGPVRRILSRPDALHCNFHEFTETWPQ
LATSGLYPEFGHYCLLPLAAEGRIFGGCEFIRQEDRPWSEKEYDRLHTFTQIVGVVAE
QIQNRVNNNVDYDLLCRERDNFRILVAITNAVLSRLDIDELVSEVAKEIHHYFNIDAI
SIVLRSHRKNKLNIYSTHYLDERHPAHEQSEVDEAGTLTERVFKSKEMLLINLNERDP
LAPYERMLFDTWGNQIQTLCLLPLMSGNTMLGVLKLAQCEEKVFTTANLKLLRQIAER
VAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYNVLKQVEM
VAQSDSTVLILGETGTGKELIARAIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHER
GAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKLIQT
DVRLIAATNRDLKKMVADREFRNDLYYRLNVFPIQLPPLRERPEDIPLLVKAFTFKIA
RRMGRNIDSIPAETLRTLSGMEWPGNVRELENVVERAVLLTRGNVLQLSLPDIAAVTP
DTPPVATEIAKEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGID
KDALA"
misc_feature complement(107868..109919)
/locus_tag="SARI_00113"
/note="formate hydrogenlyase transcriptional activator
FhlA; Provisional; Region: PRK15429"
/db_xref="CDD:237965"
misc_feature complement(109431..109859)
/locus_tag="SARI_00113"
/note="Domain present in phytochromes and cGMP-specific
phosphodiesterases; Region: GAF; smart00065"
/db_xref="CDD:214500"
misc_feature complement(108873..109331)
/locus_tag="SARI_00113"
/note="Domain present in phytochromes and cGMP-specific
phosphodiesterases; Region: GAF; smart00065"
/db_xref="CDD:214500"
misc_feature complement(108306..108779)
/locus_tag="SARI_00113"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(108687..108710)
/locus_tag="SARI_00113"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(108369..108371,108495..108497,
108684..108707))
/locus_tag="SARI_00113"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(108492..108509)
/locus_tag="SARI_00113"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(108312..108314)
/locus_tag="SARI_00113"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature complement(107883..108002)
/locus_tag="SARI_00113"
/note="Bacterial regulatory protein, Fis family; Region:
HTH_8; cl17420"
/db_xref="CDD:247974"
unsure 109580..109591
/note="Sequence derived from one plasmid subclone"
gene complement(110081..111091)
/locus_tag="SARI_00114"
/db_xref="GeneID:5763357"
CDS complement(110081..111091)
/locus_tag="SARI_00114"
/inference="protein motif:HMMPfam:IPR000728"
/inference="protein motif:HMMPfam:IPR010918"
/inference="protein motif:HMMPIR:IPR011854"
/inference="protein motif:HMMTigr:IPR011854"
/inference="similar to AA sequence:INSD:AAX66697.1"
/note="'KEGG: cch:Cag_0556 1.7e-81 hypE; hydrogenase
expression/formation protein HypE K04655;
COG: COG0309 Hydrogenase maturation factor;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569209.1"
/db_xref="GI:161502097"
/db_xref="InterPro:IPR000728"
/db_xref="InterPro:IPR010918"
/db_xref="InterPro:IPR011854"
/db_xref="GeneID:5763357"
/translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA
PLTAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEE
GLPMETLKNVVNSMAATAREAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPADIRWG
AQTLSAGDVLLVSGTLGDHGATILNLREQLGLDGELASDCAVLTPLIQTLRHINGVKA
LRDATRGGVNAVAHEFAAACGFGIELSESALPLKPAVRGVCELLGLDALNFANEGKLV
IAVERQAAEQALAALRAHPLGSDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
IC"
misc_feature complement(110174..111064)
/locus_tag="SARI_00114"
/note="HypE (Hydrogenase expression/formation protein).
HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE
dehydrates its own carbamoyl moiety in an ATP-dependent
process to yield the enzyme thiocyanate. The N-terminal
domain of HypE is related to the...; Region: HypE;
cd02197"
/db_xref="CDD:100033"
misc_feature complement(order(110420..110422,110429..110434,
110654..110656,110660..110662,110678..110680,
110684..110686,110693..110695,110699..110701,
110807..110809,110843..110845,110915..110920,
110924..110941,111044..111052))
/locus_tag="SARI_00114"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100033"
misc_feature complement(110084..111049)
/locus_tag="SARI_00114"
/note="hydrogenase expression/formation protein HypE;
Region: hypE; TIGR02124"
/db_xref="CDD:233738"
misc_feature complement(order(110420..110425,110843..110845,
110918..110920))
/locus_tag="SARI_00114"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100033"
gene complement(111088..112209)
/locus_tag="SARI_00115"
/db_xref="GeneID:5763358"
CDS complement(111088..112209)
/locus_tag="SARI_00115"
/inference="protein motif:HMMPfam:IPR002780"
/inference="protein motif:HMMPIR:IPR002780"
/inference="protein motif:HMMTigr:IPR002780"
/inference="similar to AA sequence:INSD:AAX66696.1"
/note="'COG: COG0409 Hydrogenase maturation factor;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569210.1"
/db_xref="GI:161502098"
/db_xref="InterPro:IPR002780"
/db_xref="GeneID:5763358"
/translation="MRFVDEYRAPEQVMQLIERLRKRAAHLPYTAERPLRIMEVCGGH
THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDSCVEIASHPEVIFCTFGDAMRV
PGKQGSLLQAKARGADVRIVYSPMDALKLAQDNPTRKVVFFGLGFETTMPTTAITLQQ
AKQRDVRNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTEAYQFIAADF
NRPLVVAGFEPLDLLQGVMMLVEQKIAALSQVENQYRRVVPDAGNMLAQQAIADVFCV
NGDSEWRGLGVIESSGVHLTPEYQRFDAEAHFRPAPQQVYDDPRARCGEVLTGRCKPH
QCPLFGKTCNPETAFGALMVSSEGACAAWYQYRQQECEV"
misc_feature complement(111100..112209)
/locus_tag="SARI_00115"
/note="hydrogenase isoenzymes formation protein HypD;
Provisional; Region: PRK15062"
/db_xref="CDD:237892"
misc_feature complement(111103..112206)
/locus_tag="SARI_00115"
/note="hydrogenase expression/formation protein HypD;
Region: hypD; TIGR00075"
/db_xref="CDD:232812"
gene complement(112209..112481)
/locus_tag="SARI_00116"
/db_xref="GeneID:5763359"
CDS complement(112209..112481)
/locus_tag="SARI_00116"
/inference="protein motif:BlastProDom:IPR001109"
/inference="protein motif:FPrintScan:IPR001109"
/inference="protein motif:HMMPfam:IPR001109"
/inference="protein motif:HMMPIR:IPR001109"
/inference="protein motif:HMMTigr:IPR001109"
/inference="protein motif:ScanRegExp:IPR001109"
/inference="protein motif:superfamily:IPR008994"
/inference="similar to AA sequence:INSD:CAD05963.1"
/note="'HypC; accessory protein necessary for maturation
of the hydrogenase isoforms 1, 2 and 3; forms a complex
with HypD, HypE, and HypF proteins, which is the site of
ligand biosynthesis and attachment to the iron atom of the
NiFe site in the hydrogenase'"
/codon_start=1
/transl_table=11
/product="hydrogenase assembly chaperone"
/protein_id="YP_001569211.1"
/db_xref="GI:161502099"
/db_xref="InterPro:IPR001109"
/db_xref="InterPro:IPR008994"
/db_xref="GeneID:5763359"
/translation="MCIGVPGQIRAIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRL
GQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEER"
misc_feature complement(112212..112481)
/locus_tag="SARI_00116"
/note="hydrogenase assembly chaperone; Provisional;
Region: PRK10409"
/db_xref="CDD:182435"
gene complement(112472..113344)
/locus_tag="SARI_00117"
/db_xref="GeneID:5763360"
CDS complement(112472..113344)
/locus_tag="SARI_00117"
/inference="protein motif:HMMPfam:IPR003495"
/inference="protein motif:HMMPIR:IPR012202"
/inference="protein motif:HMMTigr:IPR004392"
/inference="similar to AA sequence:INSD:AAL21735.1"
/note="GTP hydrolase involved in nickel liganding into
hydrogenases"
/codon_start=1
/transl_table=11
/product="hydrogenase nickel incorporation protein HypB"
/protein_id="YP_001569212.1"
/db_xref="GI:161502100"
/db_xref="InterPro:IPR003495"
/db_xref="InterPro:IPR004392"
/db_xref="InterPro:IPR012202"
/db_xref="GeneID:5763360"
/translation="MCTTCGCAEGNLYIEGDEHNPHSAFRSAPFAPAARPTLKITGIK
TPDFAPSQTTEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAH
QQLVLNLVSSPGSGKTTLLTETLMKLKDRVPCAVIEGDQQTVNDAARIRATGTPAIQV
NTGKGCHLDAQMIADAAPRLPLDDRGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIASAREVNPEIEIILISATSGEG
MDQWLAWLEAQRCA"
misc_feature complement(112475..113344)
/locus_tag="SARI_00117"
/note="hydrogenase nickel incorporation protein HypB;
Provisional; Region: PRK10463"
/db_xref="CDD:182479"
gene complement(113451..113822)
/gene="hypA"
/locus_tag="SARI_00118"
/db_xref="GeneID:5763361"
CDS complement(113451..113822)
/gene="hypA"
/locus_tag="SARI_00118"
/inference="protein motif:BlastProDom:IPR000688"
/inference="protein motif:HMMPfam:IPR000688"
/inference="protein motif:HMMPIR:IPR000688"
/inference="protein motif:HMMTigr:IPR000688"
/inference="protein motif:ScanRegExp:IPR000688"
/inference="similar to AA sequence:INSD:CAD05961.1"
/note="plays a role in hydrogenase nickel cofactor
insertion"
/codon_start=1
/transl_table=11
/product="hydrogenase nickel incorporation protein"
/protein_id="YP_001569213.1"
/db_xref="GI:161502101"
/db_xref="InterPro:IPR000688"
/db_xref="GeneID:5763361"
/translation="MHEITLCQRALELIEQQASAYGAKHVTAIWLKIGAFSCVETSAL
SFCFDLVCRGTIAEGCKLHLEEQEAECWCEHCQQYVTLLTHRVRRCPQCHSDTLRIVA
DDGLQIRRIEIDETPAPDGNA"
misc_feature complement(113481..113822)
/gene="hypA"
/locus_tag="SARI_00118"
/note="Hydrogenase expression/synthesis hypA family;
Region: HypA; cl17671"
/db_xref="CDD:248225"
misc_feature complement(113481..113822)
/gene="hypA"
/locus_tag="SARI_00118"
/note="hydrogenase nickel incorporation protein;
Validated; Region: hypA; PRK03681"
/db_xref="CDD:179630"
gene 114033..114500
/locus_tag="SARI_00119"
/db_xref="GeneID:5763362"
CDS 114033..114500
/locus_tag="SARI_00119"
/inference="similar to AA sequence:REFSEQ:YP_151880.1"
/note="regulates several genes involved in the formate
hydrogenlyase system; seems to prevent binding of FhlA
transcriptional activator to the activator sequence of hyc
operon"
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase regulatory protein HycA"
/protein_id="YP_001569214.1"
/db_xref="GI:161502102"
/db_xref="GeneID:5763362"
/translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
AMSCAPEKDLCFVLFEHFRIYVALADGFNSHTIEYYVETKDGEDKQLIAQAQLDIDGK
VDERVNNRDREQVLEHYLEKIASVYDSLYAAVETNSPINLRQLVKGHSPAVQA"
misc_feature 114033..114488
/locus_tag="SARI_00119"
/note="formate hydrogenlyase regulatory protein HycA;
Provisional; Region: PRK10198"
/db_xref="CDD:182298"
gene 114640..115248
/locus_tag="SARI_00120"
/db_xref="GeneID:5763363"
CDS 114640..115248
/locus_tag="SARI_00120"
/inference="protein motif:HMMPfam:IPR001450"
/inference="protein motif:ScanRegExp:IPR001450"
/inference="similar to AA sequence:REFSEQ:NP_457246.1"
/note="'KEGG: eci:UTI89_C3087 5.8e-88 hycB; formate
hydrogenlyase subunit 2;
COG: COG1142 Fe-S-cluster-containing hydrogenase
components 2;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase subunit 2"
/protein_id="YP_001569215.2"
/db_xref="GI:448236178"
/db_xref="InterPro:IPR001450"
/db_xref="GeneID:5763363"
/translation="MNRFVIADSTLCIGCRTCEAACSETHRQHGLQSMPRLKVMLNEK
ESAPQLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGS
RPLHIPANANTPKAPSAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCP
TKALHLVDNTDIARASKRKRELTFNTDFGDLTLFQQAQSGDA"
misc_feature 114640..115188
/locus_tag="SARI_00120"
/note="Fe-S-cluster-containing hydrogenase components 2
[Energy production and conversion]; Region: HycB; COG1142"
/db_xref="CDD:224065"
gene 115248..117074
/locus_tag="SARI_00121"
/db_xref="GeneID:5763364"
CDS 115248..117074
/locus_tag="SARI_00121"
/inference="protein motif:HMMPfam:IPR001750"
/note="'catalyzes the oxidation of formate to carbon
dioxide and molecular hydrogen; formate hydrogenlyase
comprises of a formate dehydrogenase, unidentified
electron carriers and a hydrogenase (subunit 3)'"
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase subunit 3"
/protein_id="YP_001569216.1"
/db_xref="GI:161502104"
/db_xref="InterPro:IPR001750"
/db_xref="GeneID:5763364"
/translation="MSSLSLITSGVVWFVAAAVLAFLFSFHKALSGWVAGIGGAVGSL
CTAGAGFTALTSAVTVSGVMPFTGQMLQITPLNAIWLITLGLCGLFVSLFNIDWHRHP
QVKANGLLVNLLIAAAVCAVVASNLGTMVVMAEIMALCAVFLTGGSKEGKLWFALGRL
GTLLLAIACGLAWQRYGTLDMGLLDQRAQQLPLGSDIWLLGVIGFGLLAGIIPLHGWV
PQAHANASAPAAALFSTVVMKIGLLGILSLSLIGGNAPLWWGVALLVLGIITAFVGGL
YALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALNQPALIALGLTGGLYHLVNHSL
FKSVLFLGAGSIWFCTGHRDIEKLGGIGKRMPVISIAMLVGLMAMAALPPLNGFAGEW
VIYQSFFRLGNSGAFVGRLLGPLLAVGLAVTGALAVMCMAKVYGVTFLGAPRTKEAEN
ASCAPILMGVSVVALAICCVLGGVAAPWLLPMISTAVPLPLETAHTTVSQPMITLLLI
ACPLLPFIIMAMFKGNRLPSRSRGAAWVCGYDHERSMVITAHGFAMPVKEAFAPVLKL
RQWLNPVSLVPGWQSAAAAVLFRRLALIELAVLVVIVVSRGA"
misc_feature 115326..116990
/locus_tag="SARI_00121"
/note="formate hydrogenlyase subunit 3; Reviewed; Region:
PRK08042"
/db_xref="CDD:181206"
misc_feature 115632..116438
/locus_tag="SARI_00121"
/note="NADH-Ubiquinone/plastoquinone (complex I), various
chains; Region: Oxidored_q1; pfam00361"
/db_xref="CDD:201180"
gene 117077..118000
/locus_tag="SARI_00122"
/db_xref="GeneID:5763365"
CDS 117077..118000
/locus_tag="SARI_00122"
/inference="protein motif:HMMPanther:IPR001694"
/inference="protein motif:HMMPfam:IPR001694"
/inference="protein motif:ScanRegExp:IPR001694"
/inference="similar to AA sequence:REFSEQ:NP_457244.1"
/note="'KEGG: eci:UTI89_C3085 1.3e-145 hycD;
membrane-spanning protein of formate hydrogenase;
COG: COG0650 Formate hydrogenlyase subunit 4;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569217.1"
/db_xref="GI:161502105"
/db_xref="InterPro:IPR001694"
/db_xref="GeneID:5763365"
/translation="MSVFYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
DIIKLLGRQSIAPADSGWVFRLTPFVMVGVMLTIATALPVVTVGSPLPQLGDLITLIY
LFAIARFFFSIAGLDTGSPFTAIGASREAMLGVLVEPILLLGLWVAAQVAGSTHISNI
TDTIYHWPVARSIPLILALCACAFATFIEMGKLPFDLAEAEQELQEGPLTEYSGSGFA
VLKWGISLKQLVVLQMFVGVFLPWGQMETFTAGGLLLALVIAVVKLVVGVLVIALFEN
SMARLRFCATSRVTWAGFGFAFLAFVSLLAA"
misc_feature 117077..117949
/locus_tag="SARI_00122"
/note="Formate hydrogenlyase subunit 4 [Energy production
and conversion]; Region: HyfC; COG0650"
/db_xref="CDD:223723"
misc_feature 117083..>117730
/locus_tag="SARI_00122"
/note="NADH dehydrogenase; Region: NADHdh; cl00469"
/db_xref="CDD:241885"
gene 118018..119727
/locus_tag="SARI_00123"
/db_xref="GeneID:5763366"
CDS 118018..119727
/locus_tag="SARI_00123"
/inference="protein motif:BlastProDom:IPR001268"
/inference="protein motif:HMMPfam:IPR001135"
/inference="protein motif:HMMPfam:IPR001268"
/inference="protein motif:HMMPfam:IPR001501"
/inference="protein motif:ScanRegExp:IPR001135"
/inference="protein motif:superfamily:IPR008992"
/note="'KEGG: eci:UTI89_C3084 0. hycE; formate
hydrogenlyase subunit 5 precursor;
COG: COG3261 Ni,Fe-hydrogenase III large subunit;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569218.1"
/db_xref="GI:161502106"
/db_xref="InterPro:IPR001135"
/db_xref="InterPro:IPR001268"
/db_xref="InterPro:IPR001501"
/db_xref="InterPro:IPR008992"
/db_xref="GeneID:5763366"
/translation="MSEEKLGQQYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPE
VVEFLYYQQGGWLSVLFGNDERQLCGHYAVYYVMSMEQGTRCWVTVRVEVDPNKPEYP
SVTPRVSAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
EVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
RDLLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPEIARDFSNVGP
MVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTSLNMIDFGLD
NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT
LRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS
PLK"
misc_feature 118021..118515
/locus_tag="SARI_00123"
/note="Ni,Fe-hydrogenase III component G [Energy
production and conversion]; Region: HycE; COG3262"
/db_xref="CDD:225801"
misc_feature 118531..119634
/locus_tag="SARI_00123"
/note="Ni,Fe-hydrogenase III large subunit [Energy
production and conversion]; Region: HycE; COG3261"
/db_xref="CDD:225800"
misc_feature 118540..119628
/locus_tag="SARI_00123"
/note="NADH dehydrogenase subunit D; Validated; Region:
PRK06075; cl17338"
/db_xref="CDD:247892"
gene 119737..120279
/locus_tag="SARI_00124"
/db_xref="GeneID:5763367"
CDS 119737..120279
/locus_tag="SARI_00124"
/inference="protein motif:HMMPfam:IPR001450"
/inference="protein motif:ScanRegExp:IPR001450"
/inference="protein motif:superfamily:IPR009051"
/inference="similar to AA sequence:REFSEQ:NP_457242.1"
/note="'electron transfer protein for hydrogenase-3; the
formate hydrogenlyase complex comprises of a formate
dehydrogenase, unidentified electron carriers and
hydrogenase-3; in this non-energy conserving pathway,
molecular hydrogen and carbodioxide are released from
formate'"
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase complex iron-sulfur
subunit"
/protein_id="YP_001569219.1"
/db_xref="GI:161502107"
/db_xref="InterPro:IPR001450"
/db_xref="InterPro:IPR009051"
/db_xref="GeneID:5763367"
/translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEHNPQQCIGCA
ACVNACPSNALTVETDLATNELAWQFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
KEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLKHNGDSRAEHHRESFETCPDCKR
QKCLVPSDRIELTRHMKEAS"
misc_feature 119737..120276
/locus_tag="SARI_00124"
/note="formate hydrogenlyase complex iron-sulfur subunit;
Provisional; Region: PRK12387"
/db_xref="CDD:183492"
misc_feature <119851..>119997
/locus_tag="SARI_00124"
/note="The HCP family of iron-sulfur proteins includes
hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
and carbon monoxide dehydrogenase (CODH), all of which
contain [Fe4-S4] metal clusters at their active sites.
These proteins have a conserved...; Region: HCP_like;
cl14655"
/db_xref="CDD:246686"
gene 120279..121046
/locus_tag="SARI_00125"
/db_xref="GeneID:5763368"
CDS 120279..121046
/locus_tag="SARI_00125"
/inference="protein motif:HMMPfam:IPR006137"
/inference="protein motif:ScanRegExp:IPR006138"
/inference="similar to AA sequence:REFSEQ:NP_461768.1"
/note="'KEGG: eci:UTI89_C3082 1.4e-132 hycG; formate
hydrogenlyase subunit 7;
COG: COG3260 Ni,Fe-hydrogenase III small subunit;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569220.1"
/db_xref="GI:161502108"
/db_xref="InterPro:IPR006137"
/db_xref="InterPro:IPR006138"
/db_xref="GeneID:5763368"
/translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKNIKRSAYVYRVD
CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQS
APDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
GLLEQKIHARAPGELDDQPAEILHPDMVQPLRVKVDRAARRLAGYRYGRQIADDYLTQ
LGQGEQQVARWLEAENDPRLTEIVTHLNHVVEEARIR"
misc_feature 120366..120809
/locus_tag="SARI_00125"
/note="Ni,Fe-hydrogenase III small subunit [Energy
production and conversion]; Region: COG3260"
/db_xref="CDD:225799"
gene 121043..121453
/locus_tag="SARI_00126"
/db_xref="GeneID:5763369"
CDS 121043..121453
/locus_tag="SARI_00126"
/inference="protein motif:HMMPfam:IPR010005"
/inference="similar to AA sequence:REFSEQ:NP_457240.1"
/note="'KEGG: eci:UTI89_C3081 2.2e-63 hycH; formate
hydrogenlyase maturation protein HycH;
COG: NOG09848 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569221.1"
/db_xref="GI:161502109"
/db_xref="InterPro:IPR010005"
/db_xref="GeneID:5763369"
/translation="MSEQVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
LEAALTCPWDEYLAWIATLEAGSDARRKMEGVPKYGEIVIDFNHVSMLARAFDNARAA
QTPQQQEWSKLMLSMLHDIHQESAIYLMVRRLRD"
misc_feature 121043..121444
/locus_tag="SARI_00126"
/note="formate hydrogenlyase maturation protein HycH;
Provisional; Region: PRK15084"
/db_xref="CDD:185042"
gene 121479..121916
/gene="hycI"
/locus_tag="SARI_00127"
/db_xref="GeneID:5763370"
CDS 121479..121916
/gene="hycI"
/locus_tag="SARI_00127"
/inference="protein motif:Gene3D:IPR000671"
/inference="protein motif:HMMPfam:IPR000671"
/inference="protein motif:HMMPIR:IPR000671"
/inference="protein motif:HMMTigr:IPR000671"
/inference="protein motif:HMMTigr:IPR004420"
/inference="protein motif:HMMTigr:IPR006227"
/inference="similar to AA sequence:REFSEQ:YP_217765.1"
/note="involved in the C-terminal processing of the large
subunit of hydrogenase 3 HycE"
/codon_start=1
/transl_table=11
/product="hydrogenase 3 maturation protease"
/protein_id="YP_001569222.1"
/db_xref="GI:161502110"
/db_xref="InterPro:IPR000671"
/db_xref="InterPro:IPR004420"
/db_xref="InterPro:IPR006227"
/db_xref="GeneID:5763370"
/translation="MMGDDGAGPLLAEKCVAQPKGNWVVIDGGSAPENDIVAIRELRP
DRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLVDQLKEDVGEVIFLGI
QPDIVGFYYPMTQPIKDAVDTVYQRLEGWLGHGGFAALEAPEA"
misc_feature 121479..121877
/gene="hycI"
/locus_tag="SARI_00127"
/note="coenzyme F420-reducing hydrogenase delta subunit
(putative coenzyme F420 hydrogenase processing subunit);
Region: frhD; TIGR00130"
/db_xref="CDD:161726"
misc_feature 121479..121862
/gene="hycI"
/locus_tag="SARI_00127"
/note="Endopeptidases belonging to membrane-bound hydrogen
evolving hydrogenase group. In hydrogenase 3 from E coli,
the maturation of the large subunit (HycE) requires the
cleavage of a C-terminal peptide by the endopeptidase
HycI, before the final formation...; Region:
H2MP_MemB-H2evol; cd06067"
/db_xref="CDD:99877"
misc_feature order(121491..121493,121629..121631,121713..121715)
/gene="hycI"
/locus_tag="SARI_00127"
/note="nickel binding site [ion binding]; other site"
/db_xref="CDD:99877"
gene 122108..122653
/locus_tag="SARI_00128"
/db_xref="GeneID:5763371"
CDS 122108..122653
/locus_tag="SARI_00128"
/inference="protein motif:HMMPfam:IPR001450"
/inference="protein motif:ScanRegExp:IPR001450"
/inference="similar to AA sequence:REFSEQ:NP_457237.1"
/note="involved in electron transport from formate to
hydrogen"
/codon_start=1
/transl_table=11
/product="electron transport protein HydN"
/protein_id="YP_001569223.1"
/db_xref="GI:161502111"
/db_xref="InterPro:IPR001450"
/db_xref="GeneID:5763371"
/translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
HVIKGVNVSTATLCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
AMEVVVRPVVRNSGAGLNVRAEKAEANKCDLCHHREAGPACMAACPTHALICVDRNKL
EQLSAEKRRRAALDSTASLLF"
misc_feature 122108..122650
/locus_tag="SARI_00128"
/note="formate dehydrogenase-H ferredoxin subunit;
Provisional; Region: PRK10330"
/db_xref="CDD:182382"
misc_feature <122225..122437
/locus_tag="SARI_00128"
/note="RPB11 and RPB3 subunits of RNA polymerase; Region:
RNAP_RPB11_RPB3; cl11409"
/db_xref="CDD:245605"
gene 122788..125028
/locus_tag="SARI_00129"
/db_xref="GeneID:5763372"
CDS 122788..125028
/locus_tag="SARI_00129"
/inference="protein motif:BlastProDom:IPR001792"
/inference="protein motif:BlastProDom:IPR006071"
/inference="protein motif:HMMPfam:IPR001792"
/inference="protein motif:HMMPfam:IPR006070"
/inference="protein motif:HMMPfam:IPR011125"
/inference="protein motif:HMMPIR:IPR004421"
/inference="protein motif:HMMTigr:IPR004421"
/inference="protein motif:ScanRegExp:IPR001792"
/inference="protein motif:superfamily:IPR011056"
/note="'KEGG: msu:MS0845 3.5e-06 acyP; acylphosphatases
K01512;
COG: COG0068 Hydrogenase maturation factor;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hydrogenase maturation protein"
/protein_id="YP_001569224.1"
/db_xref="GI:161502112"
/db_xref="InterPro:IPR001792"
/db_xref="InterPro:IPR004421"
/db_xref="InterPro:IPR006070"
/db_xref="InterPro:IPR006071"
/db_xref="InterPro:IPR011056"
/db_xref="InterPro:IPR011125"
/db_xref="GeneID:5763372"
/translation="MAIDTPSGVQLRIRGKVQGVGFRPFVWQLAQQLRLHGDVCNDGD
GVVVRLLEEPSQFIAALYQHCPPLARIDSVEHESLIWERTPTDFAIRQSAGGAMNTQI
VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
ECDTEYRDPYDRRFHAQPVACPACGPHLEWLSQCERAEKEAALQAAVAQLNAGGIIAV
KGLGGFHLVCDARNNSAVAMLRARKHRPAKPLAVMLPTAQTLPTAARSLLTTPAAPIV
LVDKQSVPSLCEGIAPGLTEVGVMLPANPLQHLLLQALNYPLVMTSGNLSGRPPAITN
EQALDDLHDIADGFLLHNRDIVQRMDDSVVRDSGEMLRRSRGYVPDAIALPPGFRDVP
PILCLGADLKNTFCLVRGEQAVVSQHLGDLSDDGIQAQWREALRLIQSIYDFTPERIV
CDAHPGYVSSRWASEMRLPTGAVLHHHAHAAACLAEHGWPLDGGEVIALTVDGIGMGE
NGALWGGECLRVNYRQCERLGGLPAVALPGGDLAARQPWRNLLAQCLRFVPDWQNYPE
TAGVQQQSWNVLARAIERGVNAPLASSCGRLFDAVAAALRCAPALLSYEGEAACALEA
LASQCVHVKHPVTMPLNGAQLDLAVFWRQWLSWQATPAQRAWAFHDALACGFATLMRQ
QATARGITTLVFSGGVIHNRLLRARLSFYLSDFNLLFPQQFPAGDGGLSLGQGVVAAA
RWLSEA"
misc_feature 122803..123060
/locus_tag="SARI_00129"
/note="Acylphosphatase; Region: Acylphosphatase;
pfam00708"
/db_xref="CDD:216072"
misc_feature 122812..125010
/locus_tag="SARI_00129"
/note="Hydrogenase maturation factor [Posttranslational
modification, protein turnover, chaperones]; Region: HypF;
COG0068"
/db_xref="CDD:223146"
misc_feature 123109..123213
/locus_tag="SARI_00129"
/note="HypF finger; Region: zf-HYPF; pfam07503"
/db_xref="CDD:203656"
misc_feature 123259..123360
/locus_tag="SARI_00129"
/note="HypF finger; Region: zf-HYPF; pfam07503"
/db_xref="CDD:203656"
misc_feature 123424..123909
/locus_tag="SARI_00129"
/note="Telomere recombination; Region: Sua5_yciO_yrdC;
pfam01300"
/db_xref="CDD:216422"
gene complement(125125..126258)
/locus_tag="SARI_00130"
/db_xref="GeneID:5763373"
CDS complement(125125..126258)
/locus_tag="SARI_00130"
/inference="protein motif:BlastProDom:IPR001327"
/inference="protein motif:FPrintScan:IPR001100"
/inference="protein motif:FPrintScan:IPR013027"
/inference="protein motif:HMMPfam:IPR001327"
/inference="protein motif:HMMPfam:IPR013027"
/inference="similar to AA sequence:INSD:AAL21721.1"
/note="catalyzes the reduction of the rubredoxin moiety of
nitric oxide reductase"
/codon_start=1
/transl_table=11
/product="nitric oxide reductase"
/protein_id="YP_001569225.1"
/db_xref="GI:161502113"
/db_xref="InterPro:IPR001100"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:5763373"
/translation="MSRGIIIIGSGFAARQLVKNIRKQDAHVPLTLIAADSMDEYNKP
DLSHVISQSQRADDLTRQLAGEFAEQFNLRLFPHTWVADIDADAHVVKSQDKQWQYDK
LVLATGAAAFVPPVAGRELMLTLNSQQEYRACETQLRAAQRVLIVGGGLIGSELAMDF
CRAGKTVTLMDNAASLLASLMPPEVSSRLQHRLTDMGVHLQLKSQLQELEKSEAGIRA
TLASQRRIEVDAAIAATGLRPETALARRAGLVINHGVCVDSYLQTSHPDIYAIGDCAE
INGQVLPFLQPIQLSAMYLAKNLLGGKAPLKLPAMLVKVKTPELPLYLAGETQRRDLS
WHITAESDGMIAKGMSGEGQLRAFVASEDRMKEAFALLKMLPV"
misc_feature complement(125128..126258)
/locus_tag="SARI_00130"
/note="NADH:flavorubredoxin oxidoreductase; Provisional;
Region: PRK04965"
/db_xref="CDD:179902"
misc_feature complement(125728..>126156)
/locus_tag="SARI_00130"
/note="NAD(P)-binding Rossmann-like domain; Region:
NAD_binding_8; cl17500"
/db_xref="CDD:248054"
misc_feature complement(<125665..125832)
/locus_tag="SARI_00130"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:215691"
gene complement(126255..127694)
/locus_tag="SARI_00131"
/db_xref="GeneID:5763374"
CDS complement(126255..127694)
/locus_tag="SARI_00131"
/inference="protein motif:BlastProDom:IPR004039"
/inference="protein motif:HMMPfam:IPR001279"
/inference="protein motif:HMMPfam:IPR004039"
/inference="protein motif:HMMPfam:IPR008254"
/inference="similar to AA sequence:INSD:AAV78555.1"
/note="detoxifies nitric oxide using NADH"
/codon_start=1
/transl_table=11
/product="anaerobic nitric oxide reductase
flavorubredoxin"
/protein_id="YP_001569226.1"
/db_xref="GI:161502114"
/db_xref="InterPro:IPR001279"
/db_xref="InterPro:IPR004039"
/db_xref="InterPro:IPR008254"
/db_xref="GeneID:5763374"
/translation="MSILVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
NVLIDTVDHKFSREFVQNLRSEIDLADIDYIIINHAEEDHAGALTELMAQIPDAPIYC
TANAIDSINGHHHHPEWNFKVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYMTGDA
VLFSNDAFGQHYCDERLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRIMADAIAQGI
NEVDPNVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDLDALELCRQHGRDI
ARQWALAPLPETTQKTTPAEEITTCAAADLGPKMQCSVCQWIYDPALGEPLQDVAPGT
PWSDVPDNFLCPECSLGKDVFDVLATEAK"
misc_feature complement(126258..127694)
/locus_tag="SARI_00131"
/note="anaerobic nitric oxide reductase flavorubredoxin;
Provisional; Region: PRK05452"
/db_xref="CDD:235475"
misc_feature complement(127161..127589)
/locus_tag="SARI_00131"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; smart00849"
/db_xref="CDD:214854"
misc_feature complement(126516..126935)
/locus_tag="SARI_00131"
/note="Flavodoxin-like fold; Region: Flavodoxin_2;
cl00438"
/db_xref="CDD:241863"
misc_feature complement(126273..126422)
/locus_tag="SARI_00131"
/note="Rubredoxin; nonheme iron binding domains containing
a [Fe(SCys)4] center. Rubredoxins are small nonheme iron
proteins. The iron atom is coordinated by four cysteine
residues (Fe(S-Cys)4), but iron can also be replaced by
cobalt, nickel or zinc. They are...; Region: rubredoxin;
cd00730"
/db_xref="CDD:238372"
misc_feature complement(order(126303..126305,126312..126314,
126402..126404,126411..126413))
/locus_tag="SARI_00131"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:238372"
gene 127850..129400
/locus_tag="SARI_00132"
/db_xref="GeneID:5763375"
CDS 127850..129400
/locus_tag="SARI_00132"
/inference="protein motif:HMMPfam:IPR002078"
/inference="protein motif:HMMPfam:IPR003018"
/inference="protein motif:HMMSmart:IPR003018"
/inference="protein motif:HMMSmart:IPR003593"
/inference="protein motif:ScanRegExp:IPR002078"
/inference="protein motif:superfamily:IPR008931"
/inference="similar to AA sequence:REFSEQ:NP_461760.1"
/note="Required for the expression of anaerobic nitric
oxide (NO) reductase; acts as a transcriptional activator
for the norVW operon"
/codon_start=1
/transl_table=11
/product="anaerobic nitric oxide reductase transcription
regulator"
/protein_id="YP_001569227.1"
/db_xref="GI:161502115"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR003018"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR008931"
/db_xref="GeneID:5763375"
/translation="MHCQNDNEVAMSFSVEVLAGIAIELQRGIGHQDRFQRLITTLRQ
VLACDASALLRYESGQFIPLAIDGLAQDVLGRRFTLEGHPRLEAIARAGDVVRFPADS
DLPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTFDAMTPAQFEVFSDEELRLIA
ALAAGALSNALLIEQLESQNMLPRSSAAFEPIKETHMIGLSPAMTQLKKEIEIVASSD
LNVLIGGETGTGKELVAKAIHQGSPRAVNPLVYLNCAALPESVAESELFGHVKGAFTG
AISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVL
AATNRDLREEVLAGRFRADLFHRLSVFPLFVPPLRERGNDVVLLAGYFCEQCRLRLGL
SRVVLSPGARRHLLNYGWPGNVRELEHAIHRAVVLARATRAGDEVILEAQHFALSEDV
LPAPPAESFLALPNCRNLRESTENFQRELIRQALAQNHHNWAASARALETDVANLHRL
AKRLGLKD"
misc_feature 127886..129397
/locus_tag="SARI_00132"
/note="anaerobic nitric oxide reductase transcription
regulator; Provisional; Region: PRK05022"
/db_xref="CDD:235331"
misc_feature 127943..128293
/locus_tag="SARI_00132"
/note="GAF domain; Region: GAF; pfam01590"
/db_xref="CDD:216590"
misc_feature 128453..128926
/locus_tag="SARI_00132"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 128522..128545
/locus_tag="SARI_00132"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(128525..128548,128735..128737,128861..128863)
/locus_tag="SARI_00132"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 128723..128740
/locus_tag="SARI_00132"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 128918..128920
/locus_tag="SARI_00132"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene complement(129397..130362)
/gene="gutQ"
/locus_tag="SARI_00133"
/db_xref="GeneID:5763376"
CDS complement(129397..130362)
/gene="gutQ"
/locus_tag="SARI_00133"
/inference="protein motif:HMMPfam:IPR000644"
/inference="protein motif:HMMPfam:IPR001347"
/inference="protein motif:HMMTigr:IPR004800"
/inference="similar to AA sequence:INSD:AAO70301.1"
/note="catalyzes the conversion of D-arabinose 5-phosphate
to D-ribulose-5-phosphate"
/codon_start=1
/transl_table=11
/product="D-arabinose 5-phosphate isomerase"
/protein_id="YP_001569228.1"
/db_xref="GI:161502116"
/db_xref="InterPro:IPR000644"
/db_xref="InterPro:IPR001347"
/db_xref="InterPro:IPR004800"
/db_xref="GeneID:5763376"
/translation="MSDALLHAGRQTLMLELQEASRLPERLGDDFVRAANIIIHCEGK
VIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGA
KELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDISVEREACPMHLAPTSSTVNT
LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVHHLMRQGDAIPQVMLATSV
MDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVSGGALTTPVSEAMTPNGITL
QAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGII"
misc_feature complement(129400..130362)
/gene="gutQ"
/locus_tag="SARI_00133"
/note="D-arabinose 5-phosphate isomerase; Provisional;
Region: gutQ; PRK11543"
/db_xref="CDD:183186"
misc_feature complement(129853..130182)
/gene="gutQ"
/locus_tag="SARI_00133"
/note="KpsF-like protein. KpsF is an arabinose-5-phosphate
isomerase which contains SIS (Sugar ISomerase) domains.
SIS domains are found in many phosphosugar isomerases and
phosphosugar binding proteins. KpsF catalyzes the
reversible reaction of ribulose...; Region: SIS_Kpsf;
cd05014"
/db_xref="CDD:240145"
misc_feature complement(130072..130074)
/gene="gutQ"
/locus_tag="SARI_00133"
/note="putative active site [active]"
/db_xref="CDD:240145"
misc_feature complement(129409..129747)
/gene="gutQ"
/locus_tag="SARI_00133"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains associated
with KpsF/GutQ domains in the API [A5P (D-arabinose
5-phosphate) isomerase] protein. These APIs catalyze the
conversion of the pentose pathway...; Region:
CBS_pair_KpsF_GutQ_assoc; cd04604"
/db_xref="CDD:239977"
gene complement(130355..131128)
/gene="srlR"
/locus_tag="SARI_00134"
/db_xref="GeneID:5763377"
CDS complement(130355..131128)
/gene="srlR"
/locus_tag="SARI_00134"
/inference="protein motif:Gene3D:IPR011991"
/inference="protein motif:HMMPfam:IPR001034"
/inference="protein motif:HMMSmart:IPR001034"
/inference="protein motif:ScanRegExp:IPR001034"
/inference="similar to AA sequence:REFSEQ:NP_806440.1"
/note="regulates genes involved in glucitol utilization"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor SrlR"
/protein_id="YP_001569229.1"
/db_xref="GI:161502117"
/db_xref="InterPro:IPR001034"
/db_xref="InterPro:IPR011991"
/db_xref="GeneID:5763377"
/translation="MKPRQRQAAILEHLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
NAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKALIAATAVKYIHDGDSIILDAGST
VLQMVPLLSRFSNITVMTNSLHIVNSLSELDNEQTILMPGGTFRKKSASFHGQLAENA
FEQFSFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
VCSLESVDKLITDAGIDPAFRQALEEKGITVIITGESNE"
misc_feature complement(130361..131128)
/gene="srlR"
/locus_tag="SARI_00134"
/note="DNA-bindng transcriptional repressor SrlR;
Provisional; Region: srlR; PRK10434"
/db_xref="CDD:182457"
misc_feature complement(130943..131113)
/gene="srlR"
/locus_tag="SARI_00134"
/note="DeoR-like helix-turn-helix domain; Region:
HTH_DeoR; pfam08220"
/db_xref="CDD:116806"
misc_feature complement(130430..130912)
/gene="srlR"
/locus_tag="SARI_00134"
/note="DeoR C terminal sensor domain; Region: DeoRC;
pfam00455"
/db_xref="CDD:201239"
gene 131149..131586
/locus_tag="SARI_00135"
/db_xref="GeneID:5763378"
CDS 131149..131586
/locus_tag="SARI_00135"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569230.1"
/db_xref="GI:161502118"
/db_xref="GeneID:5763378"
/translation="MYALRNDNFASYSHSQRNYPCFSLSANDSAFCASESWGKITSGC
NSCKCFPCIAAILTGLANTVRPFINKVSVTRCCSSSATATTTRGLKRPPERPTPTRPC
WLSLSNARLKREICQPPSASCAHQAITATVIRVETIMCSCCFA"
gene complement(131202..131561)
/locus_tag="SARI_00136"
/db_xref="GeneID:5763379"
CDS complement(131202..131561)
/locus_tag="SARI_00136"
/inference="protein motif:HMMPfam:IPR009693"
/inference="similar to AA sequence:INSD:AAX66675.1"
/note="regulator for glucitol utilization"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator GutM"
/protein_id="YP_001569231.1"
/db_xref="GI:161502119"
/db_xref="InterPro:IPR009693"
/db_xref="GeneID:5763379"
/translation="MVSTLITVAVIAWCAQLALGGWQISRFNRAFDKLSQQGRVGVGR
SGGRFKPRVVVAVALDEQQRVTDTLLMKGLTVFARPVKIAAMQGKHLHELQPDVIFPH
DSLAQNALSLALKLKHG"
misc_feature complement(131208..131561)
/locus_tag="SARI_00136"
/note="DNA-binding transcriptional activator GutM;
Provisional; Region: PRK10234"
/db_xref="CDD:182322"
gene complement(131638..132417)
/locus_tag="SARI_00137"
/db_xref="GeneID:5763380"
CDS complement(131638..132417)
/locus_tag="SARI_00137"
/inference="protein motif:HMMPanther:IPR002347"
/inference="protein motif:HMMPfam:IPR002198"
/inference="protein motif:ScanRegExp:IPR002198"
/inference="similar to AA sequence:REFSEQ:NP_461756.1"
/note="catalyzes the conversion of sorbitol 6-phosphate
into fructose 6-phosphate"
/codon_start=1
/transl_table=11
/product="sorbitol-6-phosphate dehydrogenase"
/protein_id="YP_001569232.1"
/db_xref="GI:161502120"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="GeneID:5763380"
/translation="MNQVAVVIGGGQTLGAFLCRGLAEEGYRVAVVDIQSDKAANVAR
EINADFGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDEVEQYYIDK
VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
misc_feature complement(131641..132417)
/locus_tag="SARI_00137"
/note="sorbitol-6-phosphate dehydrogenase; Provisional;
Region: PRK12384"
/db_xref="CDD:183489"
misc_feature complement(131644..132417)
/locus_tag="SARI_00137"
/note="Sorbitol 6-phosphate dehydrogenase (SDH), classical
(c) SDRs; Region: SDH_SDR_c_like; cd05322"
/db_xref="CDD:187583"
misc_feature complement(order(131848..131853,131857..131868,
131944..131946,131956..131958,131995..132003,
132085..132087,132148..132156,132232..132240,
132313..132321,132376..132387,132391..132393))
/locus_tag="SARI_00137"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187583"
misc_feature complement(order(131944..131946,131956..131958,
131995..131997,132082..132084))
/locus_tag="SARI_00137"
/note="active site"
/db_xref="CDD:187583"
gene complement(132428..132790)
/locus_tag="SARI_00138"
/db_xref="GeneID:5763381"
CDS complement(132428..132790)
/locus_tag="SARI_00138"
/inference="protein motif:BlastProDom:IPR004716"
/inference="protein motif:HMMPfam:IPR004716"
/inference="protein motif:HMMPIR:IPR004716"
/inference="similar to AA sequence:INSD:AAV78549.1"
/note="phosphoenolpyruvate-dependent sugar
phosphotransferase system; catalyzes the phosphorylation
of incoming sugar substrates concomitant with their
translocation across the cell membrane; IIB is
phosphorylated by IIA and then transfers the phosphoryl
group to the sugar; IIC forms the translocation channel"
/codon_start=1
/transl_table=11
/product="PTS system glucitol/sorbitol-specific
transporter subunit IIA"
/protein_id="YP_001569233.1"
/db_xref="GI:161502121"
/db_xref="InterPro:IPR004716"
/db_xref="GeneID:5763381"
/translation="MSVIYQTTITRIGQSAAEALGEQMLITFREGAPADIEEFCFIHC
HGELTGELQPGARFELGQHCYPVTAVGSVAGQNLRELGHITLRFDGLREAEFPGTVHV
AGLVPDDIAPGCILKFIA"
misc_feature complement(132431..132790)
/locus_tag="SARI_00138"
/note="PTS system glucitol/sorbitol-specific transporter
subunit IIA; Provisional; Region: PRK10377"
/db_xref="CDD:182419"
gene complement(132802..133773)
/locus_tag="SARI_00139"
/db_xref="GeneID:5763382"
CDS complement(132802..133773)
/locus_tag="SARI_00139"
/inference="protein motif:HMMPfam:IPR011618"
/inference="protein motif:HMMPfam:IPR011638"
/inference="protein motif:HMMTigr:IPR004702"
/inference="protein motif:ScanRegExp:IPR000719"
/inference="similar to AA sequence:INSD:"
/note="'KEGG: sty:STY2954 7.6e-166 srlE; PTS system,
glucitol/sorbitol-specific IIBC component K02782:K02783;
COG: COG3732 Phosphotransferase system sorbitol-specific
component IIBC;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569234.1"
/db_xref="GI:161502122"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR004702"
/db_xref="InterPro:IPR011618"
/db_xref="InterPro:IPR011638"
/db_xref="GeneID:5763382"
/translation="MTRVRIEKGAGGWGGPLELNVTSGKKIVYITAGTRPAIVDKLAQ
LTGWQAVDGFKEGEPPEAEIGAAIIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
IVEDIYVSGVKEENLTLVGETSASPQPAAATAGRDYDTSKKITEQSDGLLAKVGMGMG
SAVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGL
VTLALICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACD
FIPVGLSLAEAKQDTVRVGVPSVLVGRFLTGAPTVLIAWFVSGFIYQ"
misc_feature complement(132805..133770)
/locus_tag="SARI_00139"
/note="PTS system, glucitol/sorbitol-specific, IIBC
component; Region: EIIBC-GUT; TIGR00825"
/db_xref="CDD:129905"
misc_feature complement(133249..133764)
/locus_tag="SARI_00139"
/note="Sorbitol phosphotransferase enzyme II N-terminus;
Region: EIIBC-GUT_N; pfam03612"
/db_xref="CDD:217639"
misc_feature complement(132808..133086)
/locus_tag="SARI_00139"
/note="Sorbitol phosphotransferase enzyme II C-terminus;
Region: EIIBC-GUT_C; pfam07663"
/db_xref="CDD:148973"
gene complement(133770..134390)
/locus_tag="SARI_00140"
/db_xref="GeneID:5763383"
CDS complement(133770..134390)
/locus_tag="SARI_00140"
/inference="protein motif:HMMPfam:IPR004699"
/inference="protein motif:HMMTigr:IPR004699"
/inference="similar to AA sequence:REFSEQ:YP_217752.1"
/note="'KEGG: sec:SC2765 1.0e-97 srlA; PTS family,
glucitol/sorbitol-specific enzyme IIC component,one of two
IIC components K02782:K02783;
COG: COG3730 Phosphotransferase system sorbitol-specific
component IIC;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569235.1"
/db_xref="GI:161502123"
/db_xref="InterPro:IPR004699"
/db_xref="GeneID:5763383"
/translation="MIKMNRKLVRKLKTLQERTMIETITHGAEWFIGLFQKGGEVFTG
MVTGILPLLISLLVIMNALINFIGQQRIERFAQRCAGNPLSRYLLLPCIGTFVFCNPM
TLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGP
LAVSYLLVGLVTNFFRGWVTDLTTAIFEKKMGIQLDQKVHLTGAAS"
misc_feature complement(133791..134333)
/locus_tag="SARI_00140"
/note="PTS system, glucitol/sorbitol-specific, IIC
component; Region: EII-GUT; TIGR00821"
/db_xref="CDD:129901"
gene 134586..135668
/locus_tag="SARI_00141"
/db_xref="GeneID:5763384"
CDS 134586..135668
/locus_tag="SARI_00141"
/inference="protein motif:HMMTigr:IPR011757"
/inference="similar to AA sequence:INSD:AAV78546.1"
/note="membrane-bound lytic murein transglycosylase B;
catalyzes the cleavage of the glycosidic bonds between
N-acetylmuramic acid and N-acetylglucosamine in
peptidoglycan"
/codon_start=1
/transl_table=11
/product="murein hydrolase B"
/protein_id="YP_001569236.2"
/db_xref="GI:448236179"
/db_xref="InterPro:IPR011757"
/db_xref="GeneID:5763384"
/translation="MFKRRYVALLPLCCVLLAACSGTPKSSRTQTAPGTPSGGFLLEP
QHNVMRMGGDFANNPNAQQFIDKMVSKHGFDRQQLQEILSQSKKLDYVLRLMDRQAPT
TQPPAGPNGAWLRYRKQFITPDNVQNGVAFWNQYEDALNRAWQVYGVPPEIIVGIIGV
ETRWGRIMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARNEQDDPLNLKGSFAG
AMGYGQFMPSSYKEYAVDFNGDNHINLWDPVDAIGSVANYFKAHGWVKGDVVAIPANG
QAPGLANGFKTKYSVSQLAAAGLTPQQSLGNHQEASLLRLDVGTDYQYWYGLPNFYAI
TRYNHSTHYAMAVWQLGQAVALARVR"
misc_feature 134751..135641
/locus_tag="SARI_00141"
/note="Transglycosylase SLT domain; Region: SLT_2;
pfam13406"
/db_xref="CDD:222107"
misc_feature 135171..>135389
/locus_tag="SARI_00141"
/note="Lytic Transglycosylase (LT) and Goose Egg White
Lysozyme (GEWL) domain. Members include the soluble and
insoluble membrane-bound LTs in bacteria, the LTs in
bacteriophage lambda, as well as, the eukaryotic
'goose-type' lysozymes (GEWL). LTs...; Region: LT_GEWL;
cd00254"
/db_xref="CDD:238157"
misc_feature order(135198..135200,135261..135263,135357..135359)
/locus_tag="SARI_00141"
/note="N-acetyl-D-glucosamine binding site [chemical
binding]; other site"
/db_xref="CDD:238157"
misc_feature 135198..135200
/locus_tag="SARI_00141"
/note="catalytic residue [active]"
/db_xref="CDD:238157"
gene 135851..136351
/locus_tag="SARI_00142"
/db_xref="GeneID:5763385"
CDS 135851..136351
/locus_tag="SARI_00142"
/inference="protein motif:HMMPfam:IPR008136"
/inference="protein motif:HMMPIR:IPR012244"
/inference="protein motif:HMMTigr:IPR008136"
/inference="similar to AA sequence:REFSEQ:NP_461751.1"
/note="'COG: COG1546 Uncharacterized protein (competence-
and mitomycin-induced);
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="competence damage-inducible protein A"
/protein_id="YP_001569237.1"
/db_xref="GI:161502125"
/db_xref="InterPro:IPR008136"
/db_xref="InterPro:IPR012244"
/db_xref="GeneID:5763385"
/translation="MMTDSELMRLSEQVGLALKTRGAIVTTAESCTGGWLAKAITDVA
GSSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADFAIA
ISGIAGPDGGSEEKPVGTVWFAFASVSGEGITRRECFSGNRESVRRQATTYALQNLWQ
QFLQNT"
misc_feature 135854..136345
/locus_tag="SARI_00142"
/note="hypothetical protein; Validated; Region: PRK03661"
/db_xref="CDD:179627"
gene 136421..137497
/gene="recA"
/locus_tag="SARI_00143"
/db_xref="GeneID:5763386"
CDS 136421..137497
/gene="recA"
/locus_tag="SARI_00143"
/inference="protein motif:BlastProDom:IPR001553"
/inference="protein motif:HMMPfam:IPR013765"
/inference="protein motif:HMMSmart:IPR003593"
/inference="protein motif:HMMTigr:IPR001553"
/inference="protein motif:ScanRegExp:IPR001553"
/inference="similar to AA sequence:INSD:AAO70291.1"
/note="'catalyzes the hydrolysis of ATP in the presence of
single-stranded DNA, the ATP-dependent uptake of
single-stranded DNA by duplex DNA, and the ATP-dependent
hybridization of homologous single-stranded DNAs'"
/codon_start=1
/transl_table=11
/product="recombinase A"
/protein_id="YP_001569238.1"
/db_xref="GI:161502126"
/db_xref="InterPro:IPR001553"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013765"
/db_xref="GeneID:5763386"
/translation="MTGVIMAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVE
TISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAE
HALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAE
IEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGG
NALKFYASVRLDIRRIGAVKEGDNVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINF
YGELVDLGVKEKLIEKAGAWYSYNGEKIGQGKANATTWLKENPATAKEIEKKVRELLL
SNQNSSPDFAVDDSEGVAETNEDF"
misc_feature 136436..137479
/gene="recA"
/locus_tag="SARI_00143"
/note="recombinase A; Provisional; Region: recA; PRK09354"
/db_xref="CDD:236476"
misc_feature 136451..137425
/gene="recA"
/locus_tag="SARI_00143"
/note="RecA is a bacterial enzyme which has roles in
homologous recombination, DNA repair, and the induction of
the SOS response. RecA couples ATP hydrolysis to DNA
strand exchange; Region: recA; cd00983"
/db_xref="CDD:238483"
misc_feature order(136475..136480,136484..136489,136496..136498,
136508..136522,136727..136732,136736..136756,
136769..136774,137075..137077,137087..137089,
137231..137233,137369..137371)
/gene="recA"
/locus_tag="SARI_00143"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:238483"
misc_feature 136634..136657
/gene="recA"
/locus_tag="SARI_00143"
/note="Walker A motif; other site"
/db_xref="CDD:238483"
misc_feature order(136640..136660,136724..136726,136736..136738,
136745..136747,136868..136870,137018..137020,
137117..137119,137156..137158,137222..137233)
/gene="recA"
/locus_tag="SARI_00143"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238483"
misc_feature 136856..136870
/gene="recA"
/locus_tag="SARI_00143"
/note="Walker B motif; other site"
/db_xref="CDD:238483"
gene 137614..138114
/gene="recX"
/locus_tag="SARI_00144"
/db_xref="GeneID:5763387"
CDS 137614..138114
/gene="recX"
/locus_tag="SARI_00144"
/inference="protein motif:HMMPfam:IPR003783"
/inference="similar to AA sequence:SwissProt:Q8Z4D4"
/note="binds RecA and inhibits RecA-mediated DNA strand
exchange and ATP hydrolysis and coprotease activities"
/codon_start=1
/transl_table=11
/product="recombination regulator RecX"
/protein_id="YP_001569239.1"
/db_xref="GI:161502127"
/db_xref="InterPro:IPR003783"
/db_xref="GeneID:5763387"
/translation="MSEPTPRRPAYARLLDRAVRILAVRDHSEQELRRKLSAPVMGKN
GPEEIDATPDDYERVISWCHEHHYLDDNRFVIRFIASRSRKGYGPARIRQELNQKGIA
RESTEKAMRECDIDWSEMAREQAVRKYGEPLPSTFSEKVKVQRFLLYRGYLMDDIQEI
WRNFAD"
misc_feature 137620..138111
/gene="recX"
/locus_tag="SARI_00144"
/note="recombination regulator RecX; Reviewed; Region:
recX; PRK00117"
/db_xref="CDD:234646"
gene complement(138240..138623)
/locus_tag="SARI_00145"
/db_xref="GeneID:5763388"
CDS complement(138240..138623)
/locus_tag="SARI_00145"
/inference="similar to AA sequence:INSD:AAG57802.1"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569240.1"
/db_xref="GI:161502128"
/db_xref="GeneID:5763388"
/translation="MVTCSVSDVFQIVVFPPRAYTALGSGCTGIITLIKPKENILELV
HPGIGKQQRGVIVGHQGTAGNYLMSFTMEKVEKRLTDLSGALAHNYPEIKLHVLLQAF
SALAANSPVANFDMFPRLTYRLDAA"
misc_feature complement(<138327..138506)
/locus_tag="SARI_00145"
/note="RecA-like NTPases. This family includes the NTP
binding domain of F1 and V1 H+ATPases, DnaB and related
helicases as well as bacterial RecA and related eukaryotic
and archaeal recombinases. This group also includes
bacterial conjugation proteins and...; Region:
RecA-like_NTPases; cl17233"
/db_xref="CDD:247787"
misc_feature complement(order(138426..138434,138444..138446,
138450..138452))
/locus_tag="SARI_00145"
/note="Walker A motif; other site"
/db_xref="CDD:238540"
misc_feature complement(order(138327..138329,138333..138335,
138426..138434,138444..138446))
/locus_tag="SARI_00145"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238540"
gene 138360..140990
/locus_tag="SARI_00146"
/db_xref="GeneID:5763389"
CDS 138360..140990
/locus_tag="SARI_00146"
/inference="protein motif:FPrintScan:IPR002318"
/inference="protein motif:HMMPfam:IPR002318"
/inference="protein motif:HMMPfam:IPR003156"
/inference="protein motif:HMMPfam:IPR012947"
/inference="protein motif:HMMTigr:IPR002318"
/note="'KEGG: stm:STM2827 0. alaS; alanyl-tRNA synthetase
K01872;
COG: COG0013 Alanyl-tRNA synthetase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="alanyl-tRNA ligase"
/protein_id="YP_001569241.2"
/db_xref="GI:448236180"
/db_xref="InterPro:IPR002318"
/db_xref="InterPro:IPR003156"
/db_xref="InterPro:IPR012947"
/db_xref="GeneID:5763389"
/translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGM
NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
FKHDAIQFAWELLTGENWFALPKERLWVTVYETDDEAYGIWEKEVGIPRERIIRIGDN
KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGATDL
SNKSLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
VGPLIEVMGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDG
ETAFRLYDTYGFPVDLTADVCRERDIKVDEAGFETAMEEQRRRAREASGFGADYNAMI
RVDSASEFKGYDHLELNGKVTALFVNGKAVEAINAGQEAVVVLDQTPFYAESGGQVGD
KGELKGVGFTFAVNDTQKYGQAIGHLGKLSAGALKVGDVVQADVDEARRARIRLNHSA
THLMHAALRQVLGAHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL
PIETHIMELEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHARRTGDIGLFRI
ISESGTAAGVRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQNLGDKVRAVLERSR
QLEKELQQLKDQAAAQESASLSSKAVDLNGVKLLVSELAGVEPKMLRTMVDDLKNQLG
STVIVLATVVEGKVSLIAGVSKDVTGRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
AAALPAALASVQDWVSAKLQ"
misc_feature 138363..140984
/locus_tag="SARI_00146"
/note="alanyl-tRNA synthetase; Reviewed; Region: alaS;
PRK00252"
/db_xref="CDD:234701"
misc_feature 138372..139112
/locus_tag="SARI_00146"
/note="Alanyl-tRNA synthetase (AlaRS) class II core
catalytic domain. AlaRS is a homodimer. It is responsible
for the attachment of alanine to the 3' OH group of ribose
of the appropriate tRNA. This domain is primarily
responsible for ATP-dependent...; Region: AlaRS_core;
cd00673"
/db_xref="CDD:238360"
misc_feature 138426..138440
/locus_tag="SARI_00146"
/note="motif 1; other site"
/db_xref="CDD:238360"
misc_feature order(138507..138509,138513..138515,138567..138569,
138630..138632,138636..138638,138642..138650,
138987..138992,139002..139004,139059..139064,
139074..139079,139086..139088)
/locus_tag="SARI_00146"
/note="active site"
/db_xref="CDD:238360"
misc_feature 138564..138572
/locus_tag="SARI_00146"
/note="motif 2; other site"
/db_xref="CDD:238360"
misc_feature 139071..139088
/locus_tag="SARI_00146"
/note="motif 3; other site"
/db_xref="CDD:238360"
misc_feature 140316..140444
/locus_tag="SARI_00146"
/note="Threonyl and Alanyl tRNA synthetase second
additional domain; Region: tRNA_SAD; smart00863"
/db_xref="CDD:197931"
misc_feature 140754..>140906
/locus_tag="SARI_00146"
/note="DHHA1 domain; Region: DHHA1; pfam02272"
/db_xref="CDD:216955"
gene 141225..141410
/locus_tag="SARI_00147"
/db_xref="GeneID:5763390"
CDS 141225..141410
/locus_tag="SARI_00147"
/inference="protein motif:BlastProDom:IPR003751"
/inference="protein motif:HMMPfam:IPR003751"
/inference="protein motif:HMMTigr:IPR003751"
/inference="protein motif:superfamily:IPR008994"
/inference="similar to AA sequence:INSD:AAN44211.1"
/note="affects carbohydrate metabolism; has regulatory
role in many processes"
/codon_start=1
/transl_table=11
/product="carbon storage regulator"
/protein_id="YP_001569242.1"
/db_xref="GI:161502130"
/db_xref="InterPro:IPR003751"
/db_xref="InterPro:IPR008994"
/db_xref="GeneID:5763390"
/translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
EEIYQRIQAEKSQQSSY"
misc_feature 141225..141404
/locus_tag="SARI_00147"
/note="carbon storage regulator; Provisional; Region:
PRK01712"
/db_xref="CDD:234973"
unsure 141579..141805
/note="Sequence derived from one plasmid subclone"
gene 141724..141813
/locus_tag="SARI_00148"
/db_xref="GeneID:5763391"
tRNA 141724..141813
/locus_tag="SARI_00148"
/product="tRNA-Ser"
/db_xref="GeneID:5763391"
gene 141821..141894
/locus_tag="SARI_00149"
/db_xref="GeneID:5763392"
tRNA 141821..141894
/locus_tag="SARI_00149"
/product="tRNA-Arg"
/db_xref="GeneID:5763392"
gene 141957..142030
/locus_tag="SARI_00150"
/db_xref="GeneID:5763393"
tRNA 141957..142030
/locus_tag="SARI_00150"
/product="tRNA-Arg"
/db_xref="GeneID:5763393"
gene 142096..142169
/locus_tag="SARI_00151"
/db_xref="GeneID:5763394"
tRNA 142096..142169
/locus_tag="SARI_00151"
/product="tRNA-Arg"
/db_xref="GeneID:5763394"
gene 142235..142308
/locus_tag="SARI_00152"
/db_xref="GeneID:5763395"
tRNA 142235..142308
/locus_tag="SARI_00152"
/product="tRNA-Arg"
/db_xref="GeneID:5763395"
gene 142560..143126
/locus_tag="SARI_00153"
/db_xref="GeneID:5763396"
CDS 142560..143126
/locus_tag="SARI_00153"
/inference="protein motif:FPrintScan:IPR005833"
/inference="protein motif:HMMPfam:IPR005834"
/inference="protein motif:HMMTigr:IPR006402"
/inference="protein motif:HMMTigr:IPR010976"
/inference="similar to AA sequence:INSD:AAL21705.1"
/note="'YqaB; catalyzes the dephosphorylation of fructose
1-phosphate, 6-phosphogluconate and p-nitrophenyl
phosphate (pNPP); presents beta-phosphoglucomutase
activity at a lower extent'"
/codon_start=1
/transl_table=11
/product="fructose-1-phosphatase"
/protein_id="YP_001569243.1"
/db_xref="GI:161502131"
/db_xref="InterPro:IPR005833"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006402"
/db_xref="InterPro:IPR010976"
/db_xref="GeneID:5763396"
/translation="MYARYAGLIFDMDGTLLDTEPTHRKAWREVLGRYGLRFDKQAMV
ALNGSPTWRIAQSIIELNHADLDPRSLAREKTDTVKSILLDCVEPLPLVEVVKAWYGR
RPLSVGTGSESAIAEALLAHLGLRRYFDAVVAADHVQHHKPAPDTFLLCAQRMGVMPA
QCVVFEDADFGLQAARAAGMDAVDVRLL"
misc_feature 142560..143123
/locus_tag="SARI_00153"
/note="fructose-1-P/6-phosphogluconate phosphatase;
Provisional; Region: PRK10725"
/db_xref="CDD:182679"
misc_feature <142884..143108
/locus_tag="SARI_00153"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature 142884..142886
/locus_tag="SARI_00153"
/note="motif II; other site"
/db_xref="CDD:119389"
gene 143123..143548
/locus_tag="SARI_00154"
/db_xref="GeneID:5763397"
CDS 143123..143548
/locus_tag="SARI_00154"
/inference="similar to AA sequence:INSD:AAL21704.1"
/note="'COG: COG1238 Predicted membrane protein;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569244.1"
/db_xref="GI:161502132"
/db_xref="GeneID:5763397"
/translation="MSDGLSLLSLFASSFLSATLLPGNSEVVLVAMMVSGVSHPWILV
LTATMGNSLGGVTNVILGRFFPLRKTSRWQEKAAGWLKRYGAATLLLSWMPIIGDLLC
LLAGWMRIPWGRTIFFLCLGKALRYVALAAATIQGMMWW"
misc_feature <143186..143545
/locus_tag="SARI_00154"
/note="Predicted membrane protein [Function unknown];
Region: COG1238"
/db_xref="CDD:224159"
gene 143626..145182
/locus_tag="SARI_00155"
/db_xref="GeneID:5763398"
CDS 143626..145182
/locus_tag="SARI_00155"
/inference="protein motif:HMMPfam:IPR007370"
/inference="protein motif:HMMTigr:IPR006334"
/inference="similar to AA sequence:INSD:AAL21703.1"
/note="involved in the first step of glutathione
biosynthesis"
/codon_start=1
/transl_table=11
/product="glutamate--cysteine ligase"
/protein_id="YP_001569245.1"
/db_xref="GI:161502133"
/db_xref="InterPro:IPR006334"
/db_xref="InterPro:IPR007370"
/db_xref="GeneID:5763398"
/translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGH
PEALGSALTHKWITTDFAEALLEFITPVDGDIQHMLTFMRDLHRYTARKLGDERMWPL
SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
QAKCGVTEGDAAKEKISAGYFRLIRNYYRFGWVIPYLFGASPAICSSFLQGKPTTLPF
EKTDCGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLHEYVAGLKRAIKTPSEEYVQ
IGLEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
NPFSPIGVDEQQVRFLDLFMVWCVLADAPEMSSSELLCTRANWNRVILEGRKPGLTLG
IGCETAQFPLPKVGKDLFRDLRRVAQTLDSIHGGEDYQKVCDELVACFDNPELTFSAR
ILRSMIDTGIGGTGKAFGEAYRNLLREEPLEILQEEEFIAERDASVRRQQEIEAADTE
PFAAWLAKHD"
misc_feature 143629..145176
/locus_tag="SARI_00155"
/note="glutamate--cysteine ligase; Provisional; Region:
PRK02107"
/db_xref="CDD:235001"
gene complement(145190..145265)
/locus_tag="SARI_00156"
/db_xref="GeneID:5763399"
misc_RNA complement(145190..145265)
/locus_tag="SARI_00156"
/product="SraD RNA"
/inference="nucleotide motif:Rfam:RF00078"
/note="Rfam score 80.82"
/db_xref="GeneID:5763399"
gene 145332..145847
/locus_tag="SARI_00157"
/db_xref="GeneID:5763400"
CDS 145332..145847
/locus_tag="SARI_00157"
/inference="protein motif:BlastProDom:IPR003815"
/inference="protein motif:HMMPfam:IPR003815"
/inference="protein motif:HMMPIR:IPR003815"
/inference="similar to AA sequence:INSD:AAR88507.1"
/note="catalyzes the hydrolysis of S-ribosylhomocysteine
to homocysteine and autoinducer-2"
/codon_start=1
/transl_table=11
/product="S-ribosylhomocysteinase"
/protein_id="YP_001569246.1"
/db_xref="GI:161502134"
/db_xref="InterPro:IPR003815"
/db_xref="GeneID:5763400"
/translation="MPLLDSFAVDHTRMQAPAVRVAKTMNTPHGDTITVFDLRFCVPN
KEVMPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
AWKAAMADVLKVQDQNQIPELNVYQCGTWQMHSLNEAQEIARHILDCDIRVNNNTELA
LPKEKLQELHI"
misc_feature 145332..145814
/locus_tag="SARI_00157"
/note="S-ribosylhomocysteinase; Provisional; Region:
PRK02260"
/db_xref="CDD:179399"
gene complement(145977..147515)
/locus_tag="SARI_00158"
/db_xref="GeneID:5763401"
CDS complement(145977..147515)
/locus_tag="SARI_00158"
/inference="protein motif:HMMPfam:IPR011701"
/inference="protein motif:HMMTigr:IPR004638"
/inference="similar to AA sequence:REFSEQ:NP_461741.1"
/note="'KEGG: sgl:SG1466 5.5e-07 deTHIobiotin synthase
K01935;
COG: COG0477 Permeases of the major facilitator
superfamily;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569247.1"
/db_xref="GI:161502135"
/db_xref="InterPro:IPR004638"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:5763401"
/translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL
GSSLSQGTWVITSFGVANAISIPLTGWLAKRFGEVKLFMWSTVAFAAASWACGVSSSL
NMLIFFRVVQGVVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAIGLALLVIGIGSLQI
MLDRGKELDWFSSQEIIILTVVAVIAISFLIVWELTDDHPIVDLSLFKSRNFTIGCLC
ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
RLVTFSFIMYAVCFYWRAWTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP
ERLAAASSLSNFTRTLAGSIGTSITTTMWTDRESLHHAQLTESVTAYNPNAQAMYDKL
EGLGMTRQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG
GGAH"
misc_feature complement(146022..147479)
/locus_tag="SARI_00158"
/note="drug resistance transporter, EmrB/QacA subfamily;
Region: efflux_EmrB; TIGR00711"
/db_xref="CDD:129794"
misc_feature complement(<146964..147470)
/locus_tag="SARI_00158"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(147063..147065,147081..147086,
147093..147098,147132..147134,147141..147146,
147153..147158,147165..147170,147306..147311,
147315..147320,147330..147332,147339..147344,
147351..147353,147402..147407,147411..147419,
147426..147428))
/locus_tag="SARI_00158"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature complement(146250..>146732)
/locus_tag="SARI_00158"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(147532..148731)
/locus_tag="SARI_00159"
/db_xref="GeneID:5763402"
CDS complement(147532..148731)
/locus_tag="SARI_00159"
/inference="protein motif:HMMPfam:IPR006143"
/inference="protein motif:HMMTigr:IPR005694"
/inference="protein motif:superfamily:IPR011053"
/inference="similar to AA sequence:REFSEQ:YP_217735.1"
/note="'COG: COG1566 Multidrug resistance efflux pump;
Psort location: golgi, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569248.1"
/db_xref="GI:161502136"
/db_xref="InterPro:IPR005694"
/db_xref="InterPro:IPR006143"
/db_xref="InterPro:IPR011053"
/db_xref="GeneID:5763402"
/translation="MNNKIVENNMSANAEIQTPQQSAKKKGKRKTALLLLTLLFIIIA
VAYGIYWFLVLRHIEETDDAYVAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLD
QTDARQAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDFNRRVPLGN
ANLIGREELQHARDAVASAQAKLDAAIQQYNANQAMILNSKLEDQPAVQQAATEVRNA
WLALERTRIVSPMTGYVSRRAVQPGAQISPTTPLMAVVPATDLWVDANFKETQLANMR
IGQPVTIITDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRVEL
DARQLEQHPLRIGLSTLVTVDTANRDGQVLASQVRTKPVAESNAREINLAPVNKLIDD
IVQANAG"
misc_feature complement(147535..148704)
/locus_tag="SARI_00159"
/note="multidrug efflux system protein EmrA; Provisional;
Region: PRK15136"
/db_xref="CDD:185090"
misc_feature complement(148378..148527)
/locus_tag="SARI_00159"
/note="Biotin-lipoyl like; Region: Biotin_lipoyl_2;
pfam13533"
/db_xref="CDD:205711"
misc_feature complement(<147826..148056)
/locus_tag="SARI_00159"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:222128"
gene complement(148831..149361)
/locus_tag="SARI_00160"
/db_xref="GeneID:5763403"
CDS complement(148831..149361)
/locus_tag="SARI_00160"
/inference="protein motif:Gene3D:IPR011991"
/inference="protein motif:HMMPfam:IPR000835"
/inference="protein motif:HMMSmart:IPR000835"
/inference="protein motif:ScanRegExp:IPR000835"
/inference="similar to AA sequence:INSD:AAX66653.1"
/note="DNA-binding transcriptional repressor of microcin
B17 synthesis and multidrug efflux; negative regulator of
the multidrug operon emrAB"
/codon_start=1
/transl_table=11
/product="transcriptional repressor MprA"
/protein_id="YP_001569249.1"
/db_xref="GI:161502137"
/db_xref="InterPro:IPR000835"
/db_xref="InterPro:IPR011991"
/db_xref="GeneID:5763403"
/translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQGKLLENR
NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
RRESDNDRRCLHLQLTEKGQAFLQEVLPPQHHCLHQLWSSLSTAEKDQLEHITRKLLT
RLDQMEQEGTVLEALR"
misc_feature complement(148834..149361)
/locus_tag="SARI_00160"
/note="transcriptional repressor MprA; Provisional;
Region: PRK10870"
/db_xref="CDD:182795"
misc_feature complement(148918..149226)
/locus_tag="SARI_00160"
/note="helix_turn_helix multiple antibiotic resistance
protein; Region: HTH_MARR; smart00347"
/db_xref="CDD:197670"
gene complement(149858..151042)
/locus_tag="SARI_00161"
/db_xref="GeneID:5763404"
CDS complement(149858..151042)
/locus_tag="SARI_00161"
/inference="protein motif:HMMPfam:IPR011701"
/inference="similar to AA sequence:REFSEQ:YP_151845.1"
/note="'KEGG: shn:Shewana3_1692 6.3e-17 Xaa-His
dipeptidase K01270;
COG: COG0477 Permeases of the major facilitator
superfamily;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569250.1"
/db_xref="GI:161502138"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:5763404"
/translation="MTKPTHGLSPALIVLMSVATGLAVASNYYAQPLLDTIAHHFSLS
ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRTLIVSMTLLAAGGMLITASSQSLSMM
ILGTALTGLFSVVAQILVPLAATLATPATRGKVVGTIMSGLLLGILLARTVAGLLANL
GGWRTVFWLASALMALMAVALWRGLPKLKSDTHLNYPQLLGSVFSLFIHDKLLRTRAL
LGCLTFANFSILWTSMAFLLAAPPFNYSEGMIGLFGLAGAAGALGARPAGGFVDKGKS
HLTTTVGLLLLLLSWLAIWLGHTSVLALIIGILVLDLTVQGVHITNQTVIYRLHPDAR
NRLTAGYMTSYFIGGAAGSLISASAWQHAGWIGVCLAGVTVALFNLLIWWRGFHRQEA
VN"
misc_feature complement(<150362..151042)
/locus_tag="SARI_00161"
/note="Arabinose efflux permease [Carbohydrate transport
and metabolism]; Region: AraJ; COG2814"
/db_xref="CDD:225371"
misc_feature complement(<150539..151006)
/locus_tag="SARI_00161"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(151207..152202)
/gene="proX"
/locus_tag="SARI_00162"
/db_xref="GeneID:5763405"
CDS complement(151207..152202)
/gene="proX"
/locus_tag="SARI_00162"
/inference="protein motif:HMMPfam:IPR007210"
/inference="similar to AA sequence:INSD:"
/note="'with ProVW, part of the high-affinity transport
system for the osmoprotectant glycine betaine'"
/codon_start=1
/transl_table=11
/product="glycine betaine transporter periplasmic subunit"
/protein_id="YP_001569251.1"
/db_xref="GI:161502139"
/db_xref="InterPro:IPR007210"
/db_xref="GeneID:5763405"
/translation="MRHTVIFASAFATLVTASAWASDLPGKGITVHPIQSTISEESFQ
TLLVSRALEKLGYTVNKPSEVDYNVGYTSIASGDATFTAVNWQPLHDDMYAAAGGDKK
FYREGVFVSGAAQGYLIDKKTADQYNITNIAQLKDPKIAKIFDTNGDGKADMMGCSPG
WGCEAVINHQNKAFELQKTVEVSHGNYAAMMADTITRFKEGKPVLYYTWTPYWVSDVM
KPGKDVVWLQVPFSSLPGEQKNINTKLPNGANYGFPVNTMHIVANKAWAEKNPAAAKL
FAIMKLPLADINAQNAMMHAGKSSEADVQGHVDGWINAHQQQFDGWVKEALAAQK"
misc_feature complement(151210..152202)
/gene="proX"
/locus_tag="SARI_00162"
/note="glycine betaine transporter periplasmic subunit;
Provisional; Region: proX; PRK11119"
/db_xref="CDD:236852"
misc_feature complement(151261..152088)
/gene="proX"
/locus_tag="SARI_00162"
/note="Substrate binding domain of ABC-type glycine
betaine transport system; Region: OpuAC; pfam04069"
/db_xref="CDD:217871"
gene complement(152272..153336)
/locus_tag="SARI_00163"
/db_xref="GeneID:5763406"
CDS complement(152272..153336)
/locus_tag="SARI_00163"
/inference="protein motif:HMMPfam:IPR000515"
/inference="similar to AA sequence:REFSEQ:NP_806413.1"
/note="with ProVX is involved in the high-affinity uptake
of glycine betaine"
/codon_start=1
/transl_table=11
/product="glycine betaine transporter membrane protein"
/protein_id="YP_001569252.1"
/db_xref="GI:161502140"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:5763406"
/translation="MADQTNPWDTAQVADTTAQTADAWGTPAGVATDGGSTDWLNNGP
APAPEHFSLLDPFHKTLIPLDSWVTEGIDWVVTHFRPLFQGIRVPVDYILNGFQQLLL
GMPAPVAIILFALIAWQVSGVGMGIAALISLIAIGAIGAWSQAMITLALVLTALLFCV
VIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLAL
SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
GNRRWYTTGPVGLITRPFVK"
misc_feature complement(152275..153336)
/locus_tag="SARI_00163"
/note="glycine betaine transporter membrane protein;
Provisional; Region: PRK10952"
/db_xref="CDD:236805"
misc_feature complement(152464..152904)
/locus_tag="SARI_00163"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(152485..152490,152497..152508,
152527..152529,152536..152541,152581..152583,
152632..152634,152641..152646,152656..152658,
152662..152667,152674..152676,152680..152682,
152686..152691,152737..152739,152743..152748,
152755..152784,152788..152799,152824..152826,
152839..152844,152851..152856))
/locus_tag="SARI_00163"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(152491..152508,152737..152781))
/locus_tag="SARI_00163"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(152488..152490,152704..152706,
152737..152739))
/locus_tag="SARI_00163"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(152560..152562,152572..152577,
152593..152631))
/locus_tag="SARI_00163"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(153329..154531)
/locus_tag="SARI_00164"
/db_xref="GeneID:5761954"
CDS complement(153329..154531)
/locus_tag="SARI_00164"
/inference="protein motif:BlastProDom:IPR003439"
/inference="protein motif:HMMPfam:IPR000644"
/inference="protein motif:HMMPfam:IPR003439"
/inference="protein motif:HMMSmart:IPR003593"
/inference="protein motif:HMMTigr:IPR005892"
/inference="protein motif:ScanRegExp:IPR003439"
/inference="similar to AA sequence:SwissProt:P17328"
/note="with ProWX is involved in the high-affinity uptake
of glycine betaine"
/codon_start=1
/transl_table=11
/product="glycine betaine transporter ATP-binding subunit"
/protein_id="YP_001569253.1"
/db_xref="GI:161502141"
/db_xref="InterPro:IPR000644"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005892"
/db_xref="GeneID:5761954"
/translation="MAIKLEVKNLYKIFGEHPQRAFKYIEKGLSKEQILEKTGLSLGV
KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGIAAQERREKALDALRQVGLENYAHA
YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
KDIARRSPVGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGVVSIDSLKAALS
QAQGIEAALIDDPLVVDAQTPLSELLSHVGQAPCAVPVVDEEHQYVGIISKRMLLQAL
DREGGNNG"
misc_feature complement(153332..154531)
/locus_tag="SARI_00164"
/note="glycine betaine transporter ATP-binding subunit;
Provisional; Region: PRK10070"
/db_xref="CDD:182221"
misc_feature complement(153713..154519)
/locus_tag="SARI_00164"
/note="ATP-binding cassette domain of the osmoprotectant
proline/glycine betaine uptake system; Region:
ABC_Pro_Gly_Betaine; cd03294"
/db_xref="CDD:213261"
misc_feature complement(154328..154351)
/locus_tag="SARI_00164"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213261"
misc_feature complement(order(153863..153865,153962..153967,
154193..154195,154325..154333,154337..154342))
/locus_tag="SARI_00164"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213261"
misc_feature complement(154193..154204)
/locus_tag="SARI_00164"
/note="Q-loop/lid; other site"
/db_xref="CDD:213261"
misc_feature complement(154010..154039)
/locus_tag="SARI_00164"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213261"
misc_feature complement(153962..153979)
/locus_tag="SARI_00164"
/note="Walker B; other site"
/db_xref="CDD:213261"
misc_feature complement(153944..153955)
/locus_tag="SARI_00164"
/note="D-loop; other site"
/db_xref="CDD:213261"
misc_feature complement(153857..153877)
/locus_tag="SARI_00164"
/note="H-loop/switch region; other site"
/db_xref="CDD:213261"
misc_feature complement(153359..153670)
/locus_tag="SARI_00164"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains in
association with the ABC transporter OpuCA. OpuCA is the
ATP binding component of a bacterial solute transporter
that serves a protective role to cells growing...; Region:
CBS_pair_ABC_OpuCA_assoc2; cd04583"
/db_xref="CDD:239956"
gene complement(154886..155845)
/gene="nrdF"
/locus_tag="SARI_00165"
/db_xref="GeneID:5761955"
CDS complement(154886..155845)
/gene="nrdF"
/locus_tag="SARI_00165"
/inference="protein motif:Gene3D:IPR012348"
/inference="protein motif:HMMPfam:IPR000358"
/inference="protein motif:ScanRegExp:IPR000358"
/inference="protein motif:superfamily:IPR009078"
/inference="similar to AA sequence:PDB:2BQ1"
/note="B2 or R2 protein; type 1b enzyme; catalyzes the
rate-limiting step in dNTP synthesis; converts nucleotides
to deoxynucleotides; forms a homodimer and then a
multimeric complex with NrdE"
/codon_start=1
/transl_table=11
/product="ribonucleotide-diphosphate reductase subunit
beta"
/protein_id="YP_001569254.1"
/db_xref="GI:161502142"
/db_xref="InterPro:IPR000358"
/db_xref="InterPro:IPR009078"
/db_xref="InterPro:IPR012348"
/db_xref="GeneID:5761955"
/translation="MKLSRISAINWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
WQTLNAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHA
RSYSSIFSTLCQSKDVDAAYAWSEENPQLQRKAQIMMTHYVSDEPLKKKIASVFLESF
LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKQSAIEREEL
KLFALDLLMELYDNETRYTEALYAETDWVDDVKAFLCYNANKALMNLGYEALFPPEMA
DVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF"
misc_feature complement(154889..155839)
/gene="nrdF"
/locus_tag="SARI_00165"
/note="ribonucleotide-diphosphate reductase subunit beta;
Provisional; Region: nrdF2; PRK13966"
/db_xref="CDD:140022"
misc_feature complement(155006..155821)
/gene="nrdF"
/locus_tag="SARI_00165"
/note="Ribonucleotide Reductase, R2/beta subunit,
ferritin-like diiron-binding domain; Region: RNRR2;
cd01049"
/db_xref="CDD:153108"
misc_feature complement(order(155468..155470,155477..155482,
155528..155530,155537..155539,155546..155551,
155558..155560,155567..155572,155765..155767,
155786..155788,155819..155821))
/gene="nrdF"
/locus_tag="SARI_00165"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153108"
misc_feature complement(order(155261..155263,155273..155278,
155531..155533,155543..155545,155552..155554,
155645..155647,155753..155755))
/gene="nrdF"
/locus_tag="SARI_00165"
/note="putative radical transfer pathway; other site"
/db_xref="CDD:153108"
misc_feature complement(order(155261..155263,155270..155272,
155372..155374,155543..155545,155552..155554,
155645..155647))
/gene="nrdF"
/locus_tag="SARI_00165"
/note="diiron center [ion binding]; other site"
/db_xref="CDD:153108"
misc_feature complement(155531..155533)
/gene="nrdF"
/locus_tag="SARI_00165"
/note="tyrosyl radical; other site"
/db_xref="CDD:153108"
gene complement(155856..157973)
/locus_tag="SARI_00166"
/db_xref="GeneID:5761956"
CDS complement(155856..157973)
/locus_tag="SARI_00166"
/inference="protein motif:FPrintScan:IPR000788"
/inference="protein motif:HMMPanther:IPR000788"
/inference="protein motif:HMMPfam:IPR000788"
/inference="protein motif:HMMPfam:IPR013509"
/inference="protein motif:HMMPfam:IPR013554"
/inference="protein motif:HMMTigr:IPR013346"
/inference="protein motif:ScanRegExp:IPR000788"
/inference="protein motif:superfamily:IPR008926"
/note="Catalyzes the rate-limiting step in dNTP synthesis"
/codon_start=1
/transl_table=11
/product="ribonucleotide-diphosphate reductase subunit
alpha"
/protein_id="YP_001569255.1"
/db_xref="GI:161502143"
/db_xref="InterPro:IPR000788"
/db_xref="InterPro:IPR008926"
/db_xref="InterPro:IPR013346"
/db_xref="InterPro:IPR013509"
/db_xref="InterPro:IPR013554"
/db_xref="GeneID:5761956"
/translation="MQETMDYHALNAMLNLYDKAGHIQFDKDQQAVDAFFAAHVRPHS
VTFASQDERLDTLVREGYYDDAILARYDRAFVLSLFGHAHASGFRFQTFLGAWKFYTS
YTLKTFDGKRYLEHFEDRVTMVALTLAQGDETLATQLTDEMLSGRFQPATPTFLNCGK
QQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIQNQ
SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKT
LSLGVVIPDITFRLAKENAQMALFSPYDVQRRYGKPFGDIAISERYDELLADSHVRKT
YINARDFFQTLAEIQFESGYPYIMFEDTVNRANPIAGRINMSNLCSEILQVNSASRYD
DNLDYIHIGHDISCNLGSLNIAHVMDSPDIGRTVETAIRGLTAVSDMSHIRSVPSIAA
GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNFYFYTITWHALHTSMRLARERG
KTFAGFAQSRYASGDYFTQYLQDDWQPKTAKVRALFARSGITLPTREMWLKLRDDVMR
YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKIEIRKEGKTGRVYYPAPFMTNENLD
MYQDAYEIGPEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKSL
YYIRLRQLALEGTEIEGCVSCAL"
misc_feature complement(155859..157973)
/locus_tag="SARI_00166"
/note="ribonucleotide-diphosphate reductase subunit alpha;
Validated; Region: PRK08188"
/db_xref="CDD:236179"
misc_feature complement(157710..157955)
/locus_tag="SARI_00166"
/note="Ribonucleotide reductase N-terminal; Region: RNR_N;
pfam08343"
/db_xref="CDD:192008"
misc_feature complement(<156450..157625)
/locus_tag="SARI_00166"
/note="Class I ribonucleotide reductase; Region: RNR_I;
cd01679"
/db_xref="CDD:153088"
misc_feature complement(order(156750..156752,156831..156833,
156837..156839,156843..156845,157383..157385,
157467..157472,157515..157520))
/locus_tag="SARI_00166"
/note="active site"
/db_xref="CDD:153088"
misc_feature complement(order(157257..157271,157278..157283,
157290..157295,157299..157304,157314..157316,
157350..157352,157395..157397,157404..157409,
157416..157421,157428..157430,157437..157442,
157479..157481))
/locus_tag="SARI_00166"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153088"
misc_feature complement(order(156756..156758,156831..156833,
156837..156839,156843..156845,157467..157469))
/locus_tag="SARI_00166"
/note="catalytic residues [active]"
/db_xref="CDD:153088"
misc_feature complement(order(157299..157301,157314..157316,
157356..157358,157395..157397,157431..157433,
157440..157448))
/locus_tag="SARI_00166"
/note="effector binding site; other site"
/db_xref="CDD:153088"
misc_feature complement(155916..>156272)
/locus_tag="SARI_00166"
/note="Ribonucleotide reductase and Pyruvate formate
lyase; Region: RNR_PFL; cl09939"
/db_xref="CDD:245211"
gene complement(157973..158383)
/gene="nrdI"
/locus_tag="SARI_00167"
/db_xref="GeneID:5761957"
CDS complement(157973..158383)
/gene="nrdI"
/locus_tag="SARI_00167"
/inference="protein motif:HMMPfam:IPR004465"
/inference="protein motif:HMMTigr:IPR004465"
/inference="similar to AA sequence:REFSEQ:NP_457205.1"
/note="in Salmonella NrdI has a stimulatory effect on the
ribonucleotide reductase activity of NrdH with NrdEF"
/codon_start=1
/transl_table=11
/product="ribonucleotide reductase stimulatory protein"
/protein_id="YP_001569256.1"
/db_xref="GI:161502144"
/db_xref="InterPro:IPR004465"
/db_xref="GeneID:5761957"
/translation="MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIRVDEPYIL
VVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCG
VPWLYRFELMGTQRDIDHVRKGVNEFWRQQTRSA"
misc_feature complement(157982..158383)
/gene="nrdI"
/locus_tag="SARI_00167"
/note="ribonucleotide reductase stimulatory protein;
Reviewed; Region: nrdI; PRK03600"
/db_xref="CDD:179603"
gene complement(158380..158640)
/locus_tag="SARI_00168"
/db_xref="GeneID:5761958"
CDS complement(158380..158640)
/locus_tag="SARI_00168"
/inference="protein motif:Gene3D:IPR012335"
/inference="protein motif:HMMPfam:IPR002109"
/inference="protein motif:HMMTigr:IPR011909"
/inference="protein motif:superfamily:IPR012336"
/inference="similar to AA sequence:INSD:AAX66645.1"
/note="'KEGG: vfi:VFA1040 0.00024 glutaredoxin K00435;
COG: COG0695 Glutaredoxin and related proteins;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="glutaredoxin-like protein"
/protein_id="YP_001569257.1"
/db_xref="GI:161502145"
/db_xref="InterPro:IPR002109"
/db_xref="InterPro:IPR011909"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="GeneID:5761958"
/translation="MEIRIMSITIYTRNNCVQCHATKRAMESRGFEFEMVNVDLVPDA
ADTLRAQGFRQLPVVMAGDLSWSGFRPDMINRLHPAPHAASA"
misc_feature complement(158410..158619)
/locus_tag="SARI_00168"
/note="NrdH-redoxin (NrdH) family; NrdH is a small
monomeric protein with a conserved redox active CXXC motif
within a TRX fold, characterized by a glutaredoxin
(GRX)-like sequence and TRX-like activity profile. In
vitro, it displays protein disulfide reductase...; Region:
NrdH; cd02976"
/db_xref="CDD:239274"
misc_feature complement(order(158584..158586,158593..158595))
/locus_tag="SARI_00168"
/note="catalytic residues [active]"
/db_xref="CDD:239274"
gene complement(158899..159237)
/locus_tag="SARI_00169"
/db_xref="GeneID:5761959"
CDS complement(158899..159237)
/locus_tag="SARI_00169"
/inference="protein motif:HMMPfam:IPR010279"
/inference="similar to AA sequence:INSD:AAL21687.1"
/note="'COG: COG4575 Uncharacterized conserved protein;
Psort location: vesicles of secretory system, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569258.1"
/db_xref="GI:161502146"
/db_xref="InterPro:IPR010279"
/db_xref="GeneID:5761959"
/translation="MEDHMLNKPNRNDVDDGVQDIQNDVNRLADSLEDVLKSWGSDAK
DEAETARRKAQALLKETRARMHGRTRVKQAACDAMGCADTFVREKPWCSVGTAAAVGI
FIGALLSLRR"
misc_feature complement(158902..159225)
/locus_tag="SARI_00169"
/note="hypothetical protein; Provisional; Region:
PRK10132"
/db_xref="CDD:182259"
gene 159387..159737
/locus_tag="SARI_00170"
/db_xref="GeneID:5761960"
CDS 159387..159737
/locus_tag="SARI_00170"
/inference="similar to AA sequence:INSD:CAD05911.1"
/note="'COG: NOG09772 non supervised orthologous group;
Psort location: cytoskeletal, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569259.1"
/db_xref="GI:161502147"
/db_xref="GeneID:5761960"
/translation="MYLRPDEVARVLEKAGFVVDVVTNKTYGYRRGENYVYVNREARM
GRTALIIHPRLKDRSSSLAEPASDIKTCAHYQNFPLYLGGGTHEHYGIPHGFSSRIAL
ERYLNGLFGDVTPD"
misc_feature 159387..159719
/locus_tag="SARI_00170"
/note="hypothetical protein; Provisional; Region:
PRK10556"
/db_xref="CDD:182545"
gene complement(159772..160221)
/locus_tag="SARI_00171"
/db_xref="GeneID:5761961"
CDS complement(159772..160221)
/locus_tag="SARI_00171"
/inference="protein motif:HMMPfam:IPR010574"
/inference="similar to AA sequence:INSD:AAL21685.1"
/note="'COG: NOG11269 non supervised orthologous group;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569260.2"
/db_xref="GI:448236181"
/db_xref="InterPro:IPR010574"
/db_xref="GeneID:5761961"
/translation="MFSPQSRLRHAVADTFAMVVYCSVVNMLIEIFLSGMSVEQSLSS
RLVAIPVNILIAWPYGVYRDLIMRVARKASPAGWAKNLADVLAYVTFQSPVYIIILLT
VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSNYHQAKA"
misc_feature complement(159796..160215)
/locus_tag="SARI_00171"
/note="Protein of unknown function (DUF1144); Region:
DUF1144; pfam06610"
/db_xref="CDD:148299"
gene complement(160436..160633)
/locus_tag="SARI_00172"
/db_xref="GeneID:5761962"
CDS complement(160436..160633)
/locus_tag="SARI_00172"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569261.1"
/db_xref="GI:161502149"
/db_xref="GeneID:5761962"
/translation="MIHHNNRLNIQRSLTDFYAKKDAEFALIMLKKRQERFSTRLYAV
TDDIQNIAENLQKTIYYNTLI"
gene 160909..161310
/locus_tag="SARI_00173"
/db_xref="GeneID:5761963"
CDS 160909..161310
/locus_tag="SARI_00173"
/inference="protein motif:BlastProDom:IPR001801"
/inference="protein motif:HMMPfam:IPR001801"
/inference="protein motif:HMMSmart:IPR001801"
/inference="similar to AA sequence:INSD:AAO70263.1"
/note="'COG: COG2916 DNA-binding protein H-NS;
Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="DNA binding protein, nucleoid-associated"
/protein_id="YP_001569262.1"
/db_xref="GI:161502150"
/db_xref="InterPro:IPR001801"
/db_xref="GeneID:5761963"
/translation="MNLMLQKLNNIRTLRAMAREFSIDILEEMLEKFRVVTKERREEE
ELQQRQLAEKQEKINTFLELMKADGINPEELFAINSAMPRSAKKRQPRPAKYRFTDFN
GEEKTWTGQGRTPKPIAQALAAGKSLDDFLI"
misc_feature 160909..161307
/locus_tag="SARI_00173"
/note="DNA binding protein, nucleoid-associated;
Provisional; Region: PRK10328"
/db_xref="CDD:182380"
misc_feature 161164..161307
/locus_tag="SARI_00173"
/note="Domain in histone-like proteins of HNS family;
Region: HNS; smart00528"
/db_xref="CDD:128801"
gene complement(161414..161593)
/locus_tag="SARI_00174"
/db_xref="GeneID:5761964"
CDS complement(161414..161593)
/locus_tag="SARI_00174"
/inference="similar to AA sequence:REFSEQ:YP_217718.1"
/note="'COG: NOG35541 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569263.1"
/db_xref="GI:161502151"
/db_xref="GeneID:5761964"
/translation="MFTPGDFVQPRIGGPKLKVIEVNEDHIVAVRVDDEQGEKLTLKA
ADVTPYSEGGDFGLC"
gene complement(161672..162199)
/locus_tag="SARI_00175"
/db_xref="GeneID:5761965"
CDS complement(161672..162199)
/locus_tag="SARI_00175"
/inference="protein motif:HMMPfam:IPR001763"
/inference="protein motif:HMMSmart:IPR001763"
/inference="similar to AA sequence:INSD:CAD05907.1"
/note="'KEGG: reh:H16_A0333 7.1e-12 rhodanese-related
sulfurtransferase;
COG: COG0607 Rhodanese-related sulfurtransferase;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569264.1"
/db_xref="GI:161502152"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:5761965"
/translation="MSIGIVSPREAQALIAQGAKLIDVRDADEYLREHIPHAQLAPLS
QLEQGALPANLRAEQIIFHCQSGKRTSSNAAKLQAVAAPAQVSLLEGGIDGWKAAGLP
VTEDKSQPLPLMRQVQIAAGGLTLLGVILGYTIHGGFFLISGFVGAGLMLAGLTGFCG
MARLLEKMPWNTRTH"
misc_feature complement(161891..162184)
/locus_tag="SARI_00175"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cl00125"
/db_xref="CDD:241626"
misc_feature complement(162008..162010)
/locus_tag="SARI_00175"
/note="active site residue [active]"
/db_xref="CDD:238089"
misc_feature complement(161705..161857)
/locus_tag="SARI_00175"
/note="Protein of unknown function (DUF2892); Region:
DUF2892; pfam11127"
/db_xref="CDD:220991"
gene complement(162209..162508)
/locus_tag="SARI_00176"
/db_xref="GeneID:5761966"
CDS complement(162209..162508)
/locus_tag="SARI_00176"
/inference="protein motif:FPrintScan:IPR001845"
/inference="protein motif:Gene3D:IPR011991"
/inference="protein motif:HMMPfam:IPR001845"
/inference="protein motif:HMMSmart:IPR001845"
/inference="similar to AA sequence:REFSEQ:YP_217716.1"
/note="'KEGG: reh:H16_A2208 2.8e-06 rhodanese-like:
transcriptional regulator, ArsR family;
COG: COG0640 Predicted transcriptional regulators;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569265.1"
/db_xref="GI:161502153"
/db_xref="InterPro:IPR001845"
/db_xref="InterPro:IPR011991"
/db_xref="GeneID:5761966"
/translation="MTALKQLQASAEQAAALLKAMSHPKRLLILCMLCGSPKTSAGEL
ARITGLSPSATSQHLARMREEGLIDSQRDAQRIHYFIKNEAVNMLIATLKNLYCP"
misc_feature complement(162263..162448)
/locus_tag="SARI_00176"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:238042"
misc_feature complement(order(162272..162280,162293..162301,
162317..162322,162326..162331,162338..162343,
162347..162358,162383..162388,162392..162394,
162431..162439))
/locus_tag="SARI_00176"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238042"
misc_feature complement(order(162380..162382,162392..162394))
/locus_tag="SARI_00176"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:238042"
gene 162697..162855
/locus_tag="SARI_00177"
/db_xref="GeneID:5761967"
CDS 162697..162855
/locus_tag="SARI_00177"
/inference="protein motif:HMMPanther:IPR000612"
/inference="protein motif:HMMPfam:IPR000612"
/inference="protein motif:ScanRegExp:IPR000612"
/inference="similar to AA sequence:REFSEQ:NP_457194.1"
/note="'COG: COG0401 Uncharacterized homolog of Blt101;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569266.1"
/db_xref="GI:161502154"
/db_xref="InterPro:IPR000612"
/db_xref="GeneID:5761967"
/translation="MGFWRIVFTIILPPLGVFLGKGFGWAFILNILLTLLGYIPGLIH
AFWVQMRH"
misc_feature 162697..162852
/locus_tag="SARI_00177"
/note="Uncharacterized homolog of Blt101 [Function
unknown]; Region: COG0401"
/db_xref="CDD:223478"
gene 162955..163404
/locus_tag="SARI_00178"
/db_xref="GeneID:5761968"
CDS 162955..163404
/locus_tag="SARI_00178"
/inference="protein motif:HMMPfam:IPR002482"
/inference="protein motif:HMMPfam:IPR007055"
/inference="protein motif:HMMSmart:IPR002482"
/inference="protein motif:HMMSmart:IPR014004"
/inference="similar to AA sequence:REFSEQ:YP_217714.1"
/note="'COG: COG1652 Uncharacterized protein containing
LysM domain;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="LysM domain/BON superfamily protein"
/protein_id="YP_001569267.1"
/db_xref="GI:161502155"
/db_xref="InterPro:IPR002482"
/db_xref="InterPro:IPR007055"
/db_xref="InterPro:IPR014004"
/db_xref="GeneID:5761968"
/translation="MGLFNFVKDAGEKLWDAVTANHDKDEQAKKVQEHLNKTGIPDAD
KVNVQIADGKATVTGDGLSQEAKEKILVAVGNIAGISSVDDQVKTTTPAAESQFYTVK
SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPEKIYPGQVLRIPEE"
misc_feature 162955..163398
/locus_tag="SARI_00178"
/note="LysM domain/BON superfamily protein; Provisional;
Region: PRK11198"
/db_xref="CDD:236880"
misc_feature 163039..163221
/locus_tag="SARI_00178"
/note="bacterial OsmY and nodulation domain; Region: BON;
smart00749"
/db_xref="CDD:197856"
misc_feature 163243..163392
/locus_tag="SARI_00178"
/note="Lysine Motif is a small domain involved in binding
peptidoglycan; Region: LysM; cd00118"
/db_xref="CDD:212030"
gene complement(163411..164142)
/locus_tag="SARI_00179"
/db_xref="GeneID:5761969"
CDS complement(163411..164142)
/locus_tag="SARI_00179"
/inference="protein motif:Gene3D:IPR000524"
/inference="protein motif:HMMPfam:IPR000524"
/inference="protein motif:HMMPfam:IPR011711"
/inference="protein motif:HMMSmart:IPR000524"
/inference="similar to AA sequence:INSD:AAX66632.1"
/note="regulator of gab gene expression"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator CsiR"
/protein_id="YP_001569268.1"
/db_xref="GI:161502156"
/db_xref="InterPro:IPR000524"
/db_xref="InterPro:IPR011711"
/db_xref="GeneID:5761969"
/translation="MPGASRDASQEKKMTALSQPTAIDGYRWLKNDIIRGTYQPDEKL
RMSLLTSRYALGVGPLREALSQLVAERLVTVVNQKGYRVASMSEMELLDIFDARANME
AMLVRLAIERGDDAWEAEILARAHMLSKLEASDASEHMLDEWDQRHQAFHSAIVAGCG
SHYLLQMRERLFDLAARYRFIWLRETVLSVEMLEDKHIQHHTLTEAILAREAARASEL
MRQHLLTPIPIIRQAMTGKMKPGAA"
misc_feature complement(163432..164103)
/locus_tag="SARI_00179"
/note="DNA-binding transcriptional regulator CsiR;
Provisional; Region: PRK11534"
/db_xref="CDD:183181"
misc_feature complement(163891..164067)
/locus_tag="SARI_00179"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature complement(order(163900..163911,163915..163920,
163948..163950,163957..163962,163966..163980,
164002..164007,164008..164010))
/locus_tag="SARI_00179"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(163474..163866)
/locus_tag="SARI_00179"
/note="This entry represents the C-terminal ligand binding
domain of many members of the GntR family; Region: FCD;
smart00895"
/db_xref="CDD:214892"
gene complement(164147..165547)
/locus_tag="SARI_00180"
/db_xref="GeneID:5761970"
CDS complement(164147..165547)
/locus_tag="SARI_00180"
/inference="protein motif:HMMPanther:IPR002293"
/inference="protein motif:HMMPfam:IPR004841"
/inference="protein motif:HMMTigr:IPR011265"
/inference="protein motif:ScanRegExp:IPR004840"
/inference="similar to AA sequence:INSD:AAX66631.1"
/note="'KEGG: eci:UTI89_C0120 1.3e-69 aroP; aromatic amino
acid transport protein AroP K03293;
COG: COG1113 Gamma-aminobutyrate permease and related
permeases;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="gamma-aminobutyrate transporter"
/protein_id="YP_001569269.2"
/db_xref="GI:448236182"
/db_xref="InterPro:IPR002293"
/db_xref="InterPro:IPR004840"
/db_xref="InterPro:IPR004841"
/db_xref="InterPro:IPR011265"
/db_xref="GeneID:5761970"
/translation="MGQLSESHALGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAG
PAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGPWAGYTIGWLYWWFW
VLVIPLEANIAAIILNSWISGIPVWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV
IAILAFIALGAAAISGFYPYAEVSGISRLWAHGGFMPNGFGAVLSAMLITMFSFMGAE
IVTIAAAESDTPDKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKSAGSYRSV
LELLHIPHAKFIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKTNRSKTP
WVAVLLSTGAAFLTVIVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILLAQ
GGEIKLKMWLYPWLTWLVIGFICFVLVVMLFRPAQQLEVISTGLLGLGIICTVPIMSR
WKKRIRWPKAPLQNLR"
misc_feature complement(164150..165487)
/locus_tag="SARI_00180"
/note="gamma-aminobutyrate transporter; Provisional;
Region: PRK10197"
/db_xref="CDD:182297"
gene complement(165677..166960)
/locus_tag="SARI_00181"
/db_xref="GeneID:5761971"
CDS complement(165677..166960)
/locus_tag="SARI_00181"
/inference="protein motif:HMMPanther:IPR005814"
/inference="protein motif:HMMPfam:IPR005814"
/inference="protein motif:HMMTigr:IPR004632"
/inference="protein motif:ScanRegExp:IPR005814"
/inference="similar to AA sequence:INSD:AAL21677.1"
/note="catalyzes the formation of succinate semialdehyde
and glutamate from 4-aminobutanoate and 2-oxoglutarate"
/codon_start=1
/transl_table=11
/product="4-aminobutyrate aminotransferase"
/protein_id="YP_001569270.1"
/db_xref="GI:161502158"
/db_xref="InterPro:IPR004632"
/db_xref="InterPro:IPR005814"
/db_xref="GeneID:5761971"
/translation="MNTNKALMQRRHNAVPRGVGQIHPIFAERAENCRVWDVEGREYL
DFAGGIAVLNTGHLHPGIVSAVEAQLKKLSHTCFQVLAYEPYLALCERMNQKVPGDFA
KKTLLVTTGSEAVENAVKIARAATKRSGAIAFSGAYHGRTHYTLSLTGKVNPYSAGMG
LMPGHVYRALYPCPLHGISDDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAAS
PAFMQRLRALCDQHGIMLIADEVQSGAGRTGTLFAMEQMGVAADITTFAKSIAGGFPL
AGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLDIFEHENLLQKANTLGKTLRDG
LMEIAETHREIGDVRGLGAMIAIELFENGDPSKPNATLTADIVARARDKGLILLSCGP
YYNILRILVPLTIDASQIRQGLEIIAQCFDEAKQA"
misc_feature complement(165686..166960)
/locus_tag="SARI_00181"
/note="4-aminobutyrate aminotransferase; Validated;
Region: PRK08088"
/db_xref="CDD:236149"
misc_feature complement(165698..166942)
/locus_tag="SARI_00181"
/note="Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The major
groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase;
Region: OAT_like; cd00610"
/db_xref="CDD:99735"
misc_feature complement(order(166157..166159,166235..166240,
166244..166246,166349..166351,166538..166540,
166544..166549,166625..166633))
/locus_tag="SARI_00181"
/note="inhibitor-cofactor binding pocket; inhibition site"
/db_xref="CDD:99735"
misc_feature complement(order(166157..166159,166235..166237,
166244..166246,166349..166351,166544..166549,
166625..166630))
/locus_tag="SARI_00181"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature complement(166157..166159)
/locus_tag="SARI_00181"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene complement(166975..168423)
/gene="gabD"
/locus_tag="SARI_00182"
/db_xref="GeneID:5761972"
CDS complement(166975..168423)
/gene="gabD"
/locus_tag="SARI_00182"
/inference="protein motif:HMMPfam:IPR002086"
/inference="protein motif:HMMPIR:IPR012303"
/inference="protein motif:HMMTigr:IPR010102"
/inference="protein motif:ScanRegExp:IPR002086"
/inference="similar to AA sequence:REFSEQ:NP_461717.1"
/note="catalyzes the formation of succinate from succinate
semialdehyde; NADP dependent"
/codon_start=1
/transl_table=11
/product="succinate-semialdehyde dehydrogenase I"
/protein_id="YP_001569271.1"
/db_xref="GI:161502159"
/db_xref="InterPro:IPR002086"
/db_xref="InterPro:IPR010102"
/db_xref="InterPro:IPR012303"
/db_xref="GeneID:5761972"
/translation="MQLNDSTLFRQQAFIDGDWRDARGGDVITVSNPANGKPLGNVPK
MGAQETRDAIDAASRALPAWRALTAKERATILRRWFNLMMEHQDDLARLMTLEQGKPL
AEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPS
AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAQRAGIPAGVFNVVTGSAGDIGG
EMTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEG
ALASKFRNAGQTCVCANRLYVQDSVYDRFAEKLQQAVEKLRIGDGLQSDVAIGPLIDE
KAVAKVQEHIADALEKGARIITGGEAHKLGGNFFQPTILADVPDNAKVAKEETFGPLA
PLFRFSDETEVIRQANDTEFGLAAYFYARDLSRVFRIGEALEYGIVGINTGIISNEVA
PFGGIKASGLGREGSKYGIEDYLEIKYMCIGL"
misc_feature complement(166978..168423)
/gene="gabD"
/locus_tag="SARI_00182"
/note="succinate-semialdehyde dehydrogenase I;
Provisional; Region: gabD; PRK11241"
/db_xref="CDD:183050"
misc_feature complement(166984..168336)
/gene="gabD"
/locus_tag="SARI_00182"
/note="Mitochondrial succinate-semialdehyde dehydrogenase
and ALDH family members 5A1 and 5F1-like; Region:
ALDH_F5_SSADH_GabD; cd07103"
/db_xref="CDD:143421"
misc_feature complement(order(166984..167004,167038..167040,
167053..167055,167071..167076,167083..167085,
167101..167121,167125..167127,167134..167136,
167140..167142,167152..167157,167161..167163,
167365..167367,167503..167505,167515..167517,
167686..167688,167695..167697,167707..167709,
167743..167745,167989..167991,168004..168012,
168028..168054,168058..168063,168070..168072,
168193..168195,168220..168222))
/gene="gabD"
/locus_tag="SARI_00182"
/note="tetramerization interface [polypeptide binding];
other site"
/db_xref="CDD:143421"
misc_feature complement(order(167068..167070,167182..167184,
167260..167262,167266..167268,167557..167559,
167653..167661,167701..167706,167713..167715,
167722..167733,167875..167880,167884..167886,
167929..167931,167953..167967))
/gene="gabD"
/locus_tag="SARI_00182"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:143421"
misc_feature complement(order(167557..167559,167566..167568,
167659..167661,167953..167955))
/gene="gabD"
/locus_tag="SARI_00182"
/note="catalytic residues [active]"
/db_xref="CDD:143421"
gene complement(168445..169713)
/locus_tag="SARI_00183"
/db_xref="GeneID:5761973"
CDS complement(168445..169713)
/locus_tag="SARI_00183"
/inference="protein motif:HMMPfam:IPR006076"
/inference="similar to AA sequence:REFSEQ:NP_457189.1"
/note="catalyzed the formation of 2-ketoglutarate from
2-hydroxyglutarate"
/codon_start=1
/transl_table=11
/product="hydroxyglutarate oxidase"
/protein_id="YP_001569272.1"
/db_xref="GI:161502160"
/db_xref="InterPro:IPR006076"
/db_xref="GeneID:5761973"
/translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTG
HNSGVIHAGVYYTPGSLKARFCLAGNQATKTFCDQNNICYDTCGKMLVATSELEMTRM
RALWERTAANGLEREWLSAAELREREPNIIGLGGIFVPSSGIVRYRDIATAMANRFQA
KGGEIIYHADVSALTEHAAGVIIRTSRGQEIETATLIGCAGLMADRLVKMLGVDPGFI
ICPFRGEYFRLAPEHNRIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLALKR
EGYRKRDISFADTLEILRSPGIRRVLQNHLLSGLNEMKNSLCKSGYLRRVQKYCPSLT
ANDLQPWPAGVRAQAVSPDGKLIDDFLFVATPRSIHTCNAPSPAATSAIPIGAHIVSK
VQALRESQINPGRTLRAARSVDVLHAAFTR"
misc_feature complement(168448..169713)
/locus_tag="SARI_00183"
/note="Predicted dehydrogenase [General function
prediction only]; Region: COG0579"
/db_xref="CDD:223652"
misc_feature complement(168535..169713)
/locus_tag="SARI_00183"
/note="hydroxyglutarate oxidase; Provisional; Region:
PRK11728"
/db_xref="CDD:183292"
gene complement(169739..170725)
/locus_tag="SARI_00184"
/db_xref="GeneID:5761974"
CDS complement(169739..170725)
/locus_tag="SARI_00184"
/inference="similar to AA sequence:INSD:AAL21674.1"
/note="in Escherichia coli this gene is induced by carbon
starvation and depends on sigma S and cAMP-CRP; the
structure of the Gab protein shows it is a member of
non-heme iron (II)-dependent oxygenase superfamily which
includes clavamini acid synthases; forms homotetramers in
solution"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569273.1"
/db_xref="GI:161502161"
/db_xref="GeneID:5761974"
/translation="MILMNALTAVKANTDDLAQRHAGFTLAPSAQSPRLLALTFTADT
TTQFLHQVAQWPVQALEYKSFLRFKIGKILDDLCGNQLQPLLIKTLLNRAEGALLINA
EGIDDVAQAEEMVKLATAVAHLIGRSNYDAMSGQYYARFVVKNVDNSDSYLRQPHRVM
ELHNDGTYVEEATDYVLMMKIDEQHMEGGNSLLLHLDDWEHLESFFTHPLARRVMRWA
APPSKNVSHDAWHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDALETSKNIL
SVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYAASHYQTHQ"
misc_feature complement(169775..170539)
/locus_tag="SARI_00184"
/note="Clavaminic acid synthetase (CAS) -like; CAS is a
trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase
carrying out three reactions in the biosynthesis of
clavulanic acid, an inhibitor of class A serine
beta-lactamases. In general, Fe(II)-2OG oxygenases...;
Region: CAS_like; cd00250"
/db_xref="CDD:238154"
misc_feature complement(order(169784..169786,169790..169792,
170066..170068,170207..170209,170222..170224,
170228..170230,170327..170329))
/locus_tag="SARI_00184"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:238154"
misc_feature complement(order(169802..169804,169841..169843,
170153..170155,170231..170233,170237..170239))
/locus_tag="SARI_00184"
/note="active site"
/db_xref="CDD:238154"
misc_feature complement(order(169841..169843,170231..170233,
170237..170239))
/locus_tag="SARI_00184"
/note="iron coordination sites [ion binding]; other site"
/db_xref="CDD:238154"
gene complement(170742..170888)
/locus_tag="SARI_00185"
/db_xref="GeneID:5761975"
CDS complement(170742..170888)
/locus_tag="SARI_00185"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569274.1"
/db_xref="GI:161502162"
/db_xref="GeneID:5761975"
/translation="MLNHTFHNVKNLLFLITTIKQNRLFHTRSWKMSIFLIYGYEMSI
AMSP"
gene complement(170881..171066)
/locus_tag="SARI_00186"
/db_xref="GeneID:5761976"
CDS complement(170881..171066)
/locus_tag="SARI_00186"
/note="'Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569275.1"
/db_xref="GI:161502163"
/db_xref="GeneID:5761976"
/translation="MTPVNLRLKNVALVRPTRSYARPDKPRQHHLPLLSLSHQPYYHH
NQLILKFFIKMTGYFFA"
gene complement(171053..172567)
/locus_tag="SARI_00187"
/db_xref="GeneID:5761977"
CDS complement(171053..172567)
/locus_tag="SARI_00187"
/inference="protein motif:HMMPfam:IPR002823"
/inference="similar to AA sequence:INSD:AAL21673.1"
/note="'KEGG: psp:PSPPH_3121 0.0014 nuoN; NADH-quinone
oxidoreductase, N subunit K00343;
COG: COG3333 Uncharacterized protein conserved in
bacteria;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569276.1"
/db_xref="GI:161502164"
/db_xref="InterPro:IPR002823"
/db_xref="GeneID:5761977"
/translation="MDTWIYLSQGFAVAMTPENLVIALIGCFVGTIVGLLPGLGPING
VAILLPLAFALHLPAESALILLATVYIGCEYGGRISSILLNVPGDAAAIMTALDGYPM
AQQGKGGVALSISAVSSFFGSLIAIGGIILFAPALAQWSLAFGPAEYFALMVFAIACL
GSMMAQNPLKSFLAALIGLGLATVGVDANTGVYRFTFDSVHLSDGVQFIVVVIGLFSV
SEILLMLEHTSSGQTLVRKTGRMLFNLKEGAQCIGTTLRSSVIGFFVGVLPGAGATIA
SAITYMTEKKLSGNSDSFGKGDIRGVAAPEAANNASACGSFIPMLTLGVPGSGTTAVM
MGALTLYNITPGPAMFTEQPDIVWGLIAALLIANVMLLIMNIPLIGLFTRMLTIPLWF
LVPAIAAVSAVGVYAVHSTTFDLVLMVALGVLGYILRKMHFPMSPLILGFVLGEMLEQ
NLRRALSISNGNMAILWQSGVAKALLIMAIMVVVVPPVLRLIRKHSRKPQVDAG"
misc_feature complement(171149..172567)
/locus_tag="SARI_00187"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3333"
/db_xref="CDD:225870"
gene complement(172578..173012)
/locus_tag="SARI_00188"
/db_xref="GeneID:5761978"
CDS complement(172578..173012)
/locus_tag="SARI_00188"
/inference="similar to AA sequence:INSD:AAL21672.1"
/note="'COG: NOG11450 non supervised orthologous group;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569277.1"
/db_xref="GI:161502165"
/db_xref="GeneID:5761978"
/translation="MMSDRIFAGIWLLLCIAGLFIAWQIQSEYSYEPVGPRPFPLGIL
GLMALCALALLLRHPDTVSWPRRLVLQKLVTMVIILLMYAWGFEWLGFPIATALLTMV
IGMLFGATTPAAGISGAVLGILLWYAFDRLLDVTLPLGAWLS"
misc_feature complement(172599..173009)
/locus_tag="SARI_00188"
/note="Tripartite tricarboxylate transporter TctB family;
Region: TctB; pfam07331"
/db_xref="CDD:219375"
gene complement(173024..174001)
/locus_tag="SARI_00189"
/db_xref="GeneID:5761979"
CDS complement(173024..174001)
/locus_tag="SARI_00189"
/inference="protein motif:HMMPfam:IPR005064"
/inference="similar to AA sequence:INSD:AAL21671.1"
/note="'COG: COG3181 Uncharacterized protein conserved in
bacteria;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569278.1"
/db_xref="GI:161502166"
/db_xref="InterPro:IPR005064"
/db_xref="GeneID:5761979"
/translation="MKKQLLRTLTASILLLSTSVLAQQAPSRTECIAPAKPGGGFDLT
CKLIQVSLLETGAIEKPMRVTYMPGGVGAVAYNAIVAQRPGEPGTVVAFSGGSLLNLS
QGKFGRYGVDDVRWLASVGTDYGMIAVRADSPWKTLKDLMTAMENDPNSVVIGAGASI
GSQDWMKSALLAQKANVDPRKMRYVAFEGGGEPVTALMGNHVQVVSGDLSEMVPYLDG
DKIRVLAVFSENRLPGQLADVPTAKEQGYDLVWPIIRGFYVGPKVSDADYQWWVDTFK
KLQQTDEFKKQRDLRGLFAFDMTGQQLDDYVKKQVTDYREQAKAFGLAK"
misc_feature complement(173027..173938)
/locus_tag="SARI_00189"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3181"
/db_xref="CDD:225722"
gene 174156..174830
/locus_tag="SARI_00190"
/db_xref="GeneID:5761980"
CDS 174156..174830
/locus_tag="SARI_00190"
/inference="protein motif:BlastProDom:IPR001789"
/inference="protein motif:BlastProDom:IPR001867"
/inference="protein motif:HMMPfam:IPR001789"
/inference="protein motif:HMMPfam:IPR001867"
/inference="protein motif:HMMSmart:IPR001789"
/inference="protein motif:ScanRegExp:IPR005829"
/inference="protein motif:superfamily:IPR011006"
/inference="similar to AA sequence:INSD:AAL21670.1"
/note="'KEGG: rha:RHA1_ro05622 6.2e-36 response regulator
(protein-glutamate methylesterase) K07669;
COG: COG0745 Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569279.1"
/db_xref="GI:161502167"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR011006"
/db_xref="GeneID:5761980"
/translation="MRLLLAEDNRELAHWLEKALVQNGFAVDCVFDGLAADHLLHSET
YALAVLDINMPGIDGLEVVQRLRKRGLTLPVLLLTARSAVADRVKGLNVGADDYLPKP
FELEELDARLRALLRRSAGQVHEVQRLGELIFHDEGYFLLQEQPLALTPREQALLTVL
MYRRTRPVSRQQLFEQVFSLNDEVSPESIELYIHRLRKKLQGSDVRITTLRGLGYVLE
RGDEVG"
misc_feature 174156..174818
/locus_tag="SARI_00190"
/note="transcriptional regulatory protein TctD;
Provisional; Region: PRK15479"
/db_xref="CDD:185376"
misc_feature 174165..174464
/locus_tag="SARI_00190"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature order(174174..174179,174306..174308,174330..174332,
174390..174392,174447..174449,174456..174461)
/locus_tag="SARI_00190"
/note="active site"
/db_xref="CDD:238088"
misc_feature 174306..174308
/locus_tag="SARI_00190"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature order(174315..174320,174324..174332)
/locus_tag="SARI_00190"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature 174456..174464
/locus_tag="SARI_00190"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature 174537..174806
/locus_tag="SARI_00190"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:238225"
misc_feature order(174603..174605,174660..174665,174717..174719,
174726..174728,174750..174755,174780..174782,
174795..174797)
/locus_tag="SARI_00190"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238225"
gene 174817..176232
/locus_tag="SARI_00191"
/db_xref="GeneID:5761981"
CDS 174817..176232
/locus_tag="SARI_00191"
/inference="protein motif:Gene3D:IPR003594"
/inference="protein motif:HMMPfam:IPR003594"
/inference="protein motif:HMMPfam:IPR003660"
/inference="protein motif:HMMPfam:IPR003661"
/inference="protein motif:HMMPfam:IPR013727"
/inference="protein motif:HMMSmart:IPR003594"
/inference="protein motif:HMMSmart:IPR003660"
/inference="protein motif:HMMSmart:IPR003661"
/inference="protein motif:superfamily:IPR003594"
/inference="protein motif:superfamily:IPR009082"
/inference="similar to AA sequence:INSD:AAL21669.1"
/note="'KEGG: stm:STM2784 1.7e-241 tctE; tricarboxylic
transport: regulatory protein K07649;
COG: COG0642 Signal transduction histidine kinase;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569280.1"
/db_xref="GI:161502168"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR009082"
/db_xref="InterPro:IPR013727"
/db_xref="GeneID:5761981"
/translation="MKWVKPQSLYLQLLLFLGLPLILLWGLSTFNSYVNALQAATQAY
DRTLLSSARTVSERLVVRNSHLEVNVPWVVLDSFELNMNDRLYYKVVAPSGKVISGYA
DLPAMPPATPRTRLYPALAWFYHTEYRGEAIRVARLLQPVNEGGIIGMAEIYVAETLQ
SRRYLAGQLLFSSWISQGLLVLLTLVLVGWLLRRILRPMRQLSSLMVRREPGLLTPLP
ELLPWSETRLLIVAFNRYIDRLRGILSRQERFSADASHQLKTPLAVLKTQAAVALASQ
QPRHWYESLEAMSVTLDSTIQLTERLLQLSAVKHKEQGERRFSPVNLYDVVQNGCFTR
LAQARSKHTDLGYEGEQEAVWIDGDEVLLGELCGNLLDNALKYTPEQGIVTVRLERDG
DVITLVVEDSGPGIDDEHIHLALQPFHRLDNVGNVAGAGIGLALVNDIARLHRTHPHF
SRSETLGGLYVRIRFLSIVPQ"
misc_feature 174898..175326
/locus_tag="SARI_00191"
/note="Two-component sensor kinase N-terminal; Region:
2CSK_N; pfam08521"
/db_xref="CDD:219880"
misc_feature 175393..176211
/locus_tag="SARI_00191"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:223715"
misc_feature 175393..175551
/locus_tag="SARI_00191"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cl01054"
/db_xref="CDD:242275"
misc_feature 175546..175734
/locus_tag="SARI_00191"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(175564..175566,175576..175578,175588..175590,
175597..175599,175609..175611,175618..175620,
175666..175668,175678..175680,175687..175689,
175699..175701,175708..175710,175720..175722)
/locus_tag="SARI_00191"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 175582..175584
/locus_tag="SARI_00191"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 175921..176211
/locus_tag="SARI_00191"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature order(175921..175923,175933..175935,175942..175944,
176011..176013,176017..176019,176023..176025,
176029..176034,176107..176118,176164..176166,
176173..176175,176188..176193,176197..176199)
/locus_tag="SARI_00191"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature 175933..175935
/locus_tag="SARI_00191"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature order(176023..176025,176029..176031,176107..176109,
176113..176115)
/locus_tag="SARI_00191"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene 176365..177378
/locus_tag="SARI_00192"
/db_xref="GeneID:5761982"
CDS 176365..177378
/locus_tag="SARI_00192"
/inference="protein motif:HMMPfam:IPR011541"
/inference="protein motif:HMMTigr:IPR004688"
/inference="similar to AA sequence:INSD:AAL21668.1"
/note="'COG: COG3376 High-affinity nickel permease;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569281.1"
/db_xref="GI:161502169"
/db_xref="InterPro:IPR004688"
/db_xref="InterPro:IPR011541"
/db_xref="GeneID:5761982"
/translation="MNNHTKRRGIALTAFLVSVNILAWIWAFFVFHHHAVMLSAALLA
YSFGLRHAVDADHIAAIDTVTRKLMQQGKTSLGVGAFFSLGHSTIVVVACLAIVVTSM
AFRDRIDILHQYGSLIGTAVSAFFLLAMALLNLFILFSVWRQFRSVTRGEPARAHDET
LPGGLMTRIFQRTFRLVTSSWHMYFVGFLFGLGFDTATEVGLLGISASAANQGLSLWS
MMIFPVLFTAGMALVDSLDNFVMVGAYGWAFSHPLRKLYYNMTITAASVFVALAIGGL
EALGLIDDALQLSGTFWQTVSTLNDHMGNVGFWVVAAFVLFWLLSLLNYRWRGYDKIT
LKT"
misc_feature 176365..177360
/locus_tag="SARI_00192"
/note="High-affinity nickel permease [Inorganic ion
transport and metabolism]; Region: HoxN; COG3376"
/db_xref="CDD:225911"
gene complement(178098..178994)
/locus_tag="SARI_00193"
/db_xref="GeneID:5761983"
CDS complement(178098..178994)
/locus_tag="SARI_00193"
/inference="protein motif:HMMPfam:IPR009977"
/inference="similar to AA sequence:INSD:AAO70247.1"
/note="'COG: NOG11449 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569282.1"
/db_xref="GI:161502170"
/db_xref="InterPro:IPR009977"
/db_xref="GeneID:5761983"
/translation="MKIQEVKRILTRWELSSFSLYREAFTQYGGSINMHPDIVDYFMR
RHNWHFKFFHYKEDNAIKGAYFICNDQNIGILTRRTFPLSSDEILIPMAPELRCFLPD
RTNRLSVLHQPQILNAIWKITRKKQNCLVKETFSSKFEKRRRNEYQKFLRNGGSVRTV
DELSTEELAHTFITLFQSRFGDTLSGYPIENLIDFFTQLRHLLFGNILYIEGTPCAFD
IVLKSESRLNIYFDVPNSGVKSEYMKLSPGSILMWLNINRARHYCQERQKRLIFSLGI
LKPEWEYKRLWSTPYFTGKSIC"
misc_feature complement(178101..178994)
/locus_tag="SARI_00193"
/note="antimicrobial resistance protein Mig-14;
Provisional; Region: PRK15312"
/db_xref="CDD:185212"
misc_feature complement(178140..178586)
/locus_tag="SARI_00193"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_6; pfam13480"
/db_xref="CDD:222164"
gene complement(179299..180234)
/locus_tag="SARI_00194"
/db_xref="GeneID:5761984"
CDS complement(179299..180234)
/locus_tag="SARI_00194"
/inference="protein motif:HMMPfam:IPR007488"
/inference="similar to AA sequence:REFSEQ:YP_217699.1"
/note="'COG: COG2990 Uncharacterized protein conserved in
bacteria;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569283.1"
/db_xref="GI:161502171"
/db_xref="InterPro:IPR007488"
/db_xref="GeneID:5761984"
/translation="MTMHQSDMDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFVL
RCLINPVTTIKYFNELCNLNQPRTLITHRPLLPAKIQRPYLYTGLSIRCRARAILEHY
QFVQSFAENKIKKILLSEEPTLLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDT
PLARLSFSFIHHEGKQIALVAGLQGPSKHVGPQVIRNATKDCYGLFPKRMLYEAFATF
IQACNVAEIFAVSENNHVYRQLRYLFQKKKTFVASYSEFWESLNGVKEGALYHLPSQV
MRKSPESIPSKKRAEYRNRYHILDKIVQQVKSLSH"
misc_feature complement(179311..180216)
/locus_tag="SARI_00194"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: VirK; COG2990"
/db_xref="CDD:225537"
gene 180310..180492
/locus_tag="SARI_00195"
/db_xref="GeneID:5761985"
CDS 180310..180492
/locus_tag="SARI_00195"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569284.1"
/db_xref="GI:161502172"
/db_xref="GeneID:5761985"
/translation="MPAETMLLNGLSMAAIKRIKHPFYRFSGKGGSHELSIKTNITFI
ILSNVISRYIYFVGIM"
gene 180671..181726
/locus_tag="SARI_00196"
/db_xref="GeneID:5761986"
CDS 180671..181726
/locus_tag="SARI_00196"
/inference="protein motif:HMMPfam:IPR001646"
/inference="similar to AA sequence:REFSEQ:YP_217697.1"
/note="'KEGG: ana:alr3268 4.1e-09 serine/threonine kinase
K08884;
COG: COG1357 Uncharacterized low-complexity proteins;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569285.1"
/db_xref="GI:161502173"
/db_xref="InterPro:IPR001646"
/db_xref="GeneID:5761986"
/translation="MERSPDSLAGMAASAFGTGTYAAMRQATSLQSFLEFIINFFTCG
GVQRRNKRQYQELIEAMAETLRNSMCDRRNAPLPENIILDSVGGFCVEFNLPGANNDT
GNVIVRVCKDGNTETREVPMETFEKVCRVLLFRCEYSLPQDSIILTAQGGMYLKDALL
TGANLTAENLCGADLSGANLEGAVLFMADCEGANFKGANLSGASLGDSNFKNACLEDS
IMCGATLDHANLTGANLQHASLLGCSMIDSNLCGANMERANVSGAILTGANMCDTILK
GTNMMATNMEGAILTRANLQKANLTSANLEGADLSQADLKNTNIKDCTLTHSRTEETR
MSASTQMLFNEFYSDDF"
misc_feature 180671..181723
/locus_tag="SARI_00196"
/note="secreted effector protein PipB2; Provisional;
Region: PRK15196"
/db_xref="CDD:185118"
misc_feature 181124..181225
/locus_tag="SARI_00196"
/note="Pentapeptide repeats (8 copies); Region:
Pentapeptide; pfam00805"
/db_xref="CDD:109845"
misc_feature 181187..181306
/locus_tag="SARI_00196"
/note="Pentapeptide repeats (8 copies); Region:
Pentapeptide; pfam00805"
/db_xref="CDD:109845"
misc_feature 181352..181480
/locus_tag="SARI_00196"
/note="Pentapeptide repeats (8 copies); Region:
Pentapeptide; pfam00805"
/db_xref="CDD:109845"
misc_feature 181502..181621
/locus_tag="SARI_00196"
/note="Pentapeptide repeats (8 copies); Region:
Pentapeptide; pfam00805"
/db_xref="CDD:109845"
gene complement(181698..181946)
/locus_tag="SARI_00197"
/db_xref="GeneID:5761987"
CDS complement(181698..181946)
/locus_tag="SARI_00197"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569286.1"
/db_xref="GI:161502174"
/db_xref="GeneID:5761987"
/translation="MKVLLKKIESHSDIWIVVYSCNNKRYCKLFTLSHYFSKESGLLL
IPLAHVFSDNTLFRYLFLRFLYVSLTLNRTKNHHYKIR"
gene 182301..182456
/locus_tag="SARI_00198"
/db_xref="GeneID:5761988"
CDS 182301..182456
/locus_tag="SARI_00198"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569287.1"
/db_xref="GI:161502175"
/db_xref="GeneID:5761988"
/translation="MQYKGMLRNSRAIIIAAGPDIDRQFSVCKAPDEYHQAFCISAPG
HSWSYIE"
gene complement(182341..182478)
/locus_tag="SARI_00199"
/db_xref="GeneID:5761989"
CDS complement(182341..182478)
/locus_tag="SARI_00199"
/note="'COG: COG2801 Transposase and inactivated
derivatives;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569288.1"
/db_xref="GI:161502176"
/db_xref="GeneID:5761989"
/translation="MISDAIVVIRYMTMNGLELKYKTPDDIHQALYRQKTVCLYQDQP
R"
gene 182900..185086
/locus_tag="SARI_00200"
/db_xref="GeneID:5761990"
CDS 182900..185086
/locus_tag="SARI_00200"
/inference="protein motif:HMMPfam:IPR000531"
/inference="protein motif:HMMPfam:IPR012910"
/inference="protein motif:HMMTigr:IPR010105"
/inference="protein motif:ScanRegExp:IPR000568"
/note="Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer
membrane receptor of ferric enterobactin and colicins B
and D; interacts with the TonB-ExbBD complex which
catalyzes the translocation of the siderophore to the
periplasmic space"
/codon_start=1
/transl_table=11
/product="outer membrane receptor FepA"
/protein_id="YP_001569289.1"
/db_xref="GI:161502177"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR000568"
/db_xref="InterPro:IPR010105"
/db_xref="InterPro:IPR012910"
/db_xref="GeneID:5761990"
/translation="MGMRVNKILWLITVVFSGVNSPLSAAEYSEGNGETMVVESTAEQ
VLKQQPGVSIITRDDIQKNPPVNDLSDIIRKMPGVNLTGNSASGTRGNNRQIDIRGMG
PENTLVLIDGVPVTSRNSVRYSWRGERDTRGDTNWVPPELVERIEVIRGPAAARYGSG
AAGGVVNIITKRPTNDWHGSLSLYTNQPENSKEGDTRRGNFSLSGPLAGDALTMRLYG
NLNRTDADSWDINSSAGTKNAAGREGVTNKDINSVFSWKMTSQQILDFEAGYSRQGNI
YAGDTQNSTSNAVTKSLAQSGRETNRLYRQNYGITHHGIWDWGQSRLGFYYEKTNNTR
MNEGLSGGGEGRITNDQTFTTNRLTSYRTSGEVNVPVIWLFEQTLTVGAEWNRDALED
PSSTGLTVNDNNIAGISGSAAHRSSKNKSQISALYVEDNIEPMAGTNIIPGLRFDYLS
ESGSNFSPSLNLSQELGEYVKMKAGIARAFKAPNLYQTSEGYLLYSKGNGCPKDLPSG
RAGCYLVGNKNLDPEISINKEIGLEFTVEDYHASVTYFRNDYQNKIVAGDKIIGKSSS
GAYVLQWQNGGKALVEGIEASMVVPLMPDRLNWNTNATYMITSEQKDTGNPLSIIPKY
TVNTSLDWTITSALSAGVNWTLYGKQKPRTHAESRSEETKGLSGKALGAYSLVGTNVN
YDINKNLRLNVGISNIFDKQIYRSAEGANTYNEPGRAYYAGVTASF"
misc_feature 182900..185083
/locus_tag="SARI_00200"
/note="outer membrane receptor FepA; Provisional; Region:
PRK13528"
/db_xref="CDD:237413"
misc_feature 183050..185083
/locus_tag="SARI_00200"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:238657"
misc_feature order(183050..183079,183110..183139,183185..183202,
183221..183244,183317..183349,183383..183409)
/locus_tag="SARI_00200"
/note="N-terminal plug; other site"
/db_xref="CDD:238657"
misc_feature order(183893..183895,183965..183967)
/locus_tag="SARI_00200"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:238657"
gene complement(185128..186075)
/locus_tag="SARI_00201"
/db_xref="GeneID:5761991"
CDS complement(185128..186075)
/locus_tag="SARI_00201"
/inference="protein motif:HMMPfam:IPR000801"
/inference="similar to AA sequence:REFSEQ:YP_217694.1"
/note="'KEGG: btk:BT9727_3479 6.3e-20 possible esterase;
COG: COG2819 Predicted hydrolase of the alpha/beta
superfamily;
Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569290.1"
/db_xref="GI:161502178"
/db_xref="InterPro:IPR000801"
/db_xref="GeneID:5761991"
/translation="MYGREYRHKRYRITLFLASFCFPLVYSKLSYTKPDMQPLGPNIA
DKGSEYYNFRVNDFQSADSARHYRVWTAIPYKPAPPLGYPVLYMLDGNAVMDRLSEAL
LKQLADHSPPVIVAIGYQTNLPFDLNGRAYDYTPVLGTGSEDNENNPRFHRKTGGGPA
FRQLLETHIAPQVEQGIAINPERRGVWGHSYGGLFVLDSWLSSSFFYMYYSASPSLNR
DNFALLKRIMAVTPPPFCHKKLIIMEGSASSGDSRQSQMAGLLQKVQKTVITLENNGV
NAALQDYPGQGHGPMFNVSFRNALLDISREQAGQKSRCN"
misc_feature complement(185158..185943)
/locus_tag="SARI_00201"
/note="Predicted hydrolase of the alpha/beta superfamily
[General function prediction only]; Region: COG2819"
/db_xref="CDD:225375"
gene complement(186109..187353)
/locus_tag="SARI_00203"
/db_xref="GeneID:5761992"
CDS complement(186109..187353)
/locus_tag="SARI_00203"
/inference="protein motif:HMMPfam:IPR000801"
/inference="similar to AA sequence:INSD:AAK33131.1"
/note="'KEGG: btk:BT9727_2470 2.0e-07 probable esterase
K07214;
COG: COG2382 Enterochelin esterase and related enzymes;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569291.1"
/db_xref="GI:161502180"
/db_xref="InterPro:IPR000801"
/db_xref="GeneID:5761992"
/translation="MRLSPPGDPVAMQTAARLRRQLAAGSQVDVFHFWQEANSLALPL
VTAIDGTDDEREVTFLWRAAYPLQGVYVRLNRVTDKDNVTKGMMTQLPTTDIWHLTLR
LPASYYGSYTMTEIPQETPDETVLQLGSRFATLVGQADPLNRTPGINVRGNAQESILA
LDNAPAQEEWSGRRAYAGQLFTAEHRLAGQPRCVRLYLPEVPVIQPLGLLVLTDGETW
FDHLGVSAAIDAAINSGRIAPVAVLGIDNVDEHERVAILGGRRELVLDIAERLLPTIR
AEHPERRWADRRQTVLAGQSLGGVTALMAARHVPESFGLVLSHSPSMWWTPDNRSRPD
HFSGEDRSWISEHVLSAPSPAVRTHLCVGSLEGSTVPQVKQLHEKLRASGVESHCDVY
TGGHDYAWWRGALIDGLSLLPR"
misc_feature complement(186841..187188)
/locus_tag="SARI_00203"
/note="Domain of unknown function (DUF3327); Region:
DUF3327; pfam11806"
/db_xref="CDD:221235"
misc_feature complement(186112..186999)
/locus_tag="SARI_00203"
/note="Enterochelin esterase and related enzymes
[Inorganic ion transport and metabolism]; Region: Fes;
COG2382"
/db_xref="CDD:225256"
gene 187249..187458
/locus_tag="SARI_00202"
/db_xref="GeneID:5761994"
CDS 187249..187458
/locus_tag="SARI_00202"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569292.1"
/db_xref="GI:161502179"
/db_xref="GeneID:5761994"
/translation="MPEVENVNLASGGELAAKARGSLHRDGISGWAQSHYRYSISLIF
WSVSIAKRLLQEQPLAGFLLRKSCR"
gene complement(187462..191094)
/locus_tag="SARI_00204"
/db_xref="GeneID:5761993"
CDS complement(187462..191094)
/locus_tag="SARI_00204"
/inference="protein motif:BlastProDom:IPR003439"
/inference="protein motif:HMMPfam:IPR001140"
/inference="protein motif:HMMPfam:IPR003439"
/inference="protein motif:HMMSmart:IPR003593"
/inference="protein motif:ScanRegExp:IPR003439"
/note="'KEGG: fal:FRAAL1741 1.9e-201 putative ABC
transporter ATP-binding protein;
COG: COG1132 ABC-type multidrug transport system, ATPase
and permease components;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569293.1"
/db_xref="GI:161502181"
/db_xref="InterPro:IPR001140"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:5761993"
/translation="MPARAWIVRLARVCWERKTLSTIVIVASVSTILLAALTPLITRQ
AVNDAIAGDATRLPLLTCGLLLIALFDFIGNYVRRGYAGELSLWVQHTLRSRAFDSIQ
KLDGAAQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVLTYYIAGIAVMLWMSPSMT
LIVVGVLAALAITALHARRRVFAQTGLASDRLAQITEHMREVLEQILVVKSCVAELRE
TRWLDSQSRQMVRVRIGAAISQAMPGATMLALPVLGQIILLCYGGWSVMNGHIDLGTF
VAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDTRSLMEDGTESVGGQIIGL
DVEKMSFHYGNDNRILNETSFSIHAGETVAVVGASGSGKSTLLMLLARFYDPTSGGVW
LNTTRGQQNIRDLKLTALRRHVGVVFEDAFLFAGTVAENIAYGHPQATQDDIRRAADA
AGASGFINALPQGFNTRLTERGANLSGGQRQRIALARALITAPELLILDDTTSAVDAG
TEAEINTALGRYADSEHMLLVIARRRSTLQLADRIVVLDKGRVVDIGTQAELDARCPT
FRSLMRGDGDFLALSPTEQHELWPTTQSAKSDDAHQCQTPAGKGFVDRMTRVPERAVQ
MALAGHGRQVSSLLTPVAWMFVIAALLIALDSAAGVGVLVLLQRGIDSGVAVGNMSTI
GISALLALCLVAISWCCYALQTIFAARAAESVQHTVRLRSFGHLLRLSLPWHEKNIDS
RLTRMTVDVDSLARFLQNGLASAATSIVTMVAIAAAMFWLDPILALTALSAVPVVMLA
TWIYRRLSSPAYAQARLEIGKVNSTLQEKVSGLRVVQSHGQQEQEAARLRALSNNFRT
TRVRAQKYLAVYFPFLTFCTEAAYAAVLLIGASQVAGGEMTPGVLAAFFLLQGQFYGP
VQQLSGIVDSWQQATASGKHINALLATEETENIAPSSITPSTGALRLEALTFRYPEET
QPALDNISLTIPQGTIVAVVGRSGAGKSTLIKLLAGLYSPTSGRIRIGERVIDTASLT
DYRRQTGLVSQDVALFSGDIAENIRYSRPASSNTEVEIAARRAGLLETVQHLPQGFRT
PVNNGGSDLSAGQRQLIALARAQLAQAHILLLDEATARIDRSAEERLMTSLTRVTHTE
KRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIATHGLYARLWRDSVCQTRDT
QEEVMG"
misc_feature complement(190228..>190830)
/locus_tag="SARI_00204"
/note="ABC transporter transmembrane region; Region:
ABC_membrane; pfam00664"
/db_xref="CDD:216049"
misc_feature complement(189406..190095)
/locus_tag="SARI_00204"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature complement(189415..190089)
/locus_tag="SARI_00204"
/note="ABC-type cobalt transport system, ATPase component
[Inorganic ion transport and metabolism]; Region: CbiO;
COG1122"
/db_xref="CDD:224047"
misc_feature complement(189973..189996)
/locus_tag="SARI_00204"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(order(189499..189501,189595..189600,
189838..189840,189970..189978,189982..189987))
/locus_tag="SARI_00204"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature complement(189838..189849)
/locus_tag="SARI_00204"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature complement(189643..189672)
/locus_tag="SARI_00204"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature complement(189595..189612)
/locus_tag="SARI_00204"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature complement(189577..189588)
/locus_tag="SARI_00204"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(189493..189513)
/locus_tag="SARI_00204"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
misc_feature complement(187510..189168)
/locus_tag="SARI_00204"
/note="ABC-type multidrug transport system, ATPase and
permease components [Defense mechanisms]; Region: MdlB;
COG1132"
/db_xref="CDD:224055"
misc_feature complement(188350..189093)
/locus_tag="SARI_00204"
/note="ABC transporter transmembrane region; Region:
ABC_membrane; pfam00664"
/db_xref="CDD:216049"
misc_feature complement(187513..188220)
/locus_tag="SARI_00204"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature complement(188095..188118)
/locus_tag="SARI_00204"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(order(187630..187632,187729..187734,
187972..187974,188092..188100,188104..188109))
/locus_tag="SARI_00204"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature complement(187972..187983)
/locus_tag="SARI_00204"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature complement(187777..187806)
/locus_tag="SARI_00204"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature complement(187729..187746)
/locus_tag="SARI_00204"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature complement(187711..187722)
/locus_tag="SARI_00204"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(187624..187644)
/locus_tag="SARI_00204"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene complement(191190..192296)
/locus_tag="SARI_00205"
/db_xref="GeneID:5761995"
CDS complement(191190..192296)
/locus_tag="SARI_00205"
/inference="protein motif:HMMPanther:IPR002213"
/inference="protein motif:HMMPfam:IPR010610"
/inference="similar to AA sequence:INSD:AAK33129.1"
/note="'KEGG: eci:UTI89_C1122 2.5e-174 iroB; putative
glucosyltransferase K00754;
COG: COG1819 Glycosyl transferases, related to
UDP-glucuronosyltransferase;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569294.1"
/db_xref="GI:161502182"
/db_xref="InterPro:IPR002213"
/db_xref="InterPro:IPR010610"
/db_xref="GeneID:5761995"
/translation="MRILFVGPPLYGLLYPVLSLAQAFRVNGHEVLIASGGKFAQKAA
EAGLVVFDAAPGFDSEAGYRRQEALRKENNIGTKMGNFSFFSEEMTDPLVAFAGQWRP
DLIVYPPLGVVGPLIAAKYGIPVVMQTVGFGHTPWHIKGVTKSLSNAYRRHGVSAPPR
DLAWIDVTPPSMSILQNDGEPVISMQYVPYNGGAVWEEWWERTPDRKRLLVSLGTVKP
MVDGLDLISWVMDSAGEVDAEIILHLPANARSDLRSLPPNVRLVDWLPMGVFLNGADG
FIHHGGAGNTLTALHAGIPQIVFGQGADRPVNARAVVERGCGIIPGKSGLTSSMINTF
LGNSALREASLEVAAEMAAQPCPTEVAKKLIAML"
misc_feature complement(191193..192296)
/locus_tag="SARI_00205"
/note="Glycosyl transferases, related to
UDP-glucuronosyltransferase [Carbohydrate transport and
metabolism / Signal transduction mechanisms]; Region:
COG1819"
/db_xref="CDD:224732"
misc_feature complement(191205..192296)
/locus_tag="SARI_00205"
/note="This family includes the Gtfs, a group of
homologous glycosyltransferases involved in the final
stages of the biosynthesis of antibiotics vancomycin and
related chloroeremomycin. Gtfs transfer sugar moieties
from an activated NDP-sugar donor to the...; Region:
GT1_Gtf_like; cd03784"
/db_xref="CDD:99960"
misc_feature complement(order(191211..191213,191220..191225,
191988..191990,192216..192218,192294..192296))
/locus_tag="SARI_00205"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99960"
misc_feature complement(order(191433..191435,191442..191447,
191451..191453,191457..191459,191652..191654,
192252..192254,192258..192263))
/locus_tag="SARI_00205"
/note="active site"
/db_xref="CDD:99960"
misc_feature complement(order(191442..191447,191451..191453,
191457..191459,191652..191654,192261..192263))
/locus_tag="SARI_00205"
/note="TDP-binding site; other site"
/db_xref="CDD:99960"
misc_feature complement(192258..192260)
/locus_tag="SARI_00205"
/note="acceptor substrate-binding pocket; other site"
/db_xref="CDD:99960"
gene complement(192790..192954)
/locus_tag="SARI_00206"
/db_xref="GeneID:5761996"
CDS complement(192790..192954)
/locus_tag="SARI_00206"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569295.1"
/db_xref="GI:161502183"
/db_xref="GeneID:5761996"
/translation="MMPVTRYFCIFIKLGFQETINLVADTLQKSQNSDNIPDKALFVR
NIRIMMSKRV"
gene 192982..193251
/locus_tag="SARI_00207"
/db_xref="GeneID:5761997"
CDS 192982..193251
/locus_tag="SARI_00207"
/inference="protein motif:HMMPfam:IPR006119"
/inference="similar to AA sequence:REFSEQ:YP_407274.1"
/note="'COG: COG1961 Site-specific recombinases, DNA
invertase Pin homologs;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569296.1"
/db_xref="GI:161502184"
/db_xref="InterPro:IPR006119"
/db_xref="GeneID:5761997"
/translation="MLIGYVSVSTNDQNTDLQRNTLNCAECELIFEDKISGTKPDRLG
LKKLFRTLSAGDTLVVWTLENWGAACGILSYWLKNCVSVVLIFAA"
misc_feature 192982..>193182
/locus_tag="SARI_00207"
/note="Site-specific recombinases, DNA invertase Pin
homologs [DNA replication, recombination, and repair];
Region: PinR; COG1961"
/db_xref="CDD:224872"
misc_feature 192985..>193170
/locus_tag="SARI_00207"
/note="Serine Recombinase (SR) family, Resolvase and
Invertase subfamily, catalytic domain; members contain a
C-terminal DNA binding domain. Serine recombinases
catalyze site-specific recombination of DNA molecules by a
concerted, four-strand cleavage and...; Region: SR_ResInv;
cd03768"
/db_xref="CDD:239737"
misc_feature 193006..193008
/locus_tag="SARI_00207"
/note="catalytic nucleophile [active]"
/db_xref="CDD:239737"
gene 193383..193526
/locus_tag="SARI_00208"
/db_xref="GeneID:5761998"
CDS 193383..193526
/locus_tag="SARI_00208"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569297.1"
/db_xref="GI:161502185"
/db_xref="GeneID:5761998"
/translation="MKVIPKFLLFSAEKTASFLIQFTFFHIIKAKSVIFLFFFINIAK
TKK"
gene complement(193516..194115)
/locus_tag="SARI_00209"
/db_xref="GeneID:5761999"
CDS complement(193516..194115)
/locus_tag="SARI_00209"
/inference="protein motif:HMMPfam:IPR010351"
/inference="similar to AA sequence:REFSEQ:ZP_01495963.1"
/note="'COG: NOG26268 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569298.1"
/db_xref="GI:161502186"
/db_xref="InterPro:IPR010351"
/db_xref="GeneID:5761999"
/translation="MDDYSASDMRCSDRSESQLKAQFHLTDVSTRANPYTLTKVTSFN
QPQPIFHGSRGEGEIIRQQCAAILFDELRALSGLFAMSGPYKPLIKQMIPHIQKANGA
PFRYMLLDRALKDHILSDSTPNSSRLRLAGLLKNILTRNISITRQRIKMNCENRFFEG
NSPLTDKGKINWRLKNIDVLKEKYDIPKPSSSGYFTVIF"
misc_feature complement(<193636..194115)
/locus_tag="SARI_00209"
/note="Protein of unknown function (DUF3289); Region:
DUF3289; cl11840"
/db_xref="CDD:159636"
misc_feature complement(<193519..>193635)
/locus_tag="SARI_00209"
/note="Enterobacterial putative membrane protein (DUF943);
Region: DUF943; pfam06092"
/db_xref="CDD:218892"
gene 194213..194431
/locus_tag="SARI_00210"
/db_xref="GeneID:5762000"
CDS 194213..194431
/locus_tag="SARI_00210"
/inference="similar to AA sequence:REFSEQ:YP_540438.1"
/note="'COG: NOG04673 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569299.1"
/db_xref="GI:161502187"
/db_xref="GeneID:5762000"
/translation="MCNQFNEITSMPARHVCQNFFRDALAPLHKYRQNALLDATIALI
NGASLTLTSIGRYLPGTAQVKNKIKRVD"
gene 194492..195436
/locus_tag="SARI_00211"
/db_xref="GeneID:5762001"
CDS 194492..195436
/locus_tag="SARI_00211"
/inference="protein motif:HMMPfam:IPR002559"
/inference="protein motif:superfamily:IPR012337"
/inference="similar to AA sequence:REFSEQ:YP_540438.1"
/note="'COG: NOG04673 non supervised orthologous group;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569300.1"
/db_xref="GI:161502188"
/db_xref="InterPro:IPR002559"
/db_xref="InterPro:IPR012337"
/db_xref="GeneID:5762001"
/translation="MLTSQLSLCVIAVDWSGYPSQEHHVLRASLICDGRSIPLLRWIV
PSEKQQNAKVQQAFLNTLAEAVNPEARVIIVTDAGFQNAWFRHIESLGWDFIGRIRGN
IQMRLEAKGEYWFRRQELQASSKPEYLGPGTLARSEYARCDGHFYLHKKEPKGRKNKR
SRCGIARPSQLKDASPAAKEPWLIFSSTDDFKPRVIMKLYSRRMQIEQHFRDEKSERF
GFGLRASYSRSAGRVLALSLLATLSTIVLWLVGYHAENKGLHLRYQANSVRTRRVITY
LTLAENVLRQSPLILKRTVLRTVLNHLARTYQNMVLVY"
misc_feature <194663..195190
/locus_tag="SARI_00211"
/note="Transposase DDE domain; Region: DDE_Tnp_1;
pfam01609"
/db_xref="CDD:216602"
gene 195575..197701
/locus_tag="SARI_00212"
/db_xref="GeneID:5762002"
CDS 195575..197701
/locus_tag="SARI_00212"
/inference="similar to AA sequence:INSD:AAD40326.1"
/note="'KEGG: ehi:68.t00029 3.5e-07 protein phosphatase
with leucine-rich repeats K01768;
COG: COG4886 Leucine-rich repeat (LRR) protein;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="E3 ubiquitin-protein ligase SspH2"
/protein_id="YP_001569301.2"
/db_xref="GI:448236183"
/db_xref="GeneID:5762002"
/translation="MPFYVGSGCRPATISNRRIYRIAWSDTPPEMSSWEKCKEFFCST
HQTEALECIRTICHPPAGTTREDVVSRFEQLRTLAYAGCEENIHSGLHGENHFCIMDE
DNQEILSVTLDDAGNYTVNCQGYSETHHFTMATEPGVERTEHAEGASGTSCLPATTAP
QTAAEYDAVWSAWQRAAPKGEARGRAAVVQEMRDCLKNGNPVLNVGGAGLTTLPDHLP
PHITKLIIPRNNYLTRLSRLPPGLRELSVDGNLLASLPALPPGLQSLSVPGNQLPSLP
DLPSGLRKLWASGNRLTSLSALPSGLRELIISSNRLTSLPALPSELRELSVSHNLLPS
LPELPSGLQELSVSHNRLTRLPESIISLPSYARVNLDGNPLSERTLRTLRNLTSAPGY
SGPRIRFDMAGPSVPREARALHLAVADWLMPAREGEPDPADRWHASGQEDNAAAFSLF
LDRLSETENFEKDAGFKAQISSWLALLAEDDVLRAKTFAMATEATSSCEDRVTFALHQ
MKNVQLVHNAEKGVYDNNLPGLVSTGREMFRMEMLERIALEKVRTLAFVDEIEVCLAY
QNKLKESLELTSVTAEMRFFGASGVTTSDLRSAERQVKAAENSEFSEWLLQWGPLHSV
LERKEPERFNALREKQISDYEHTYQMLSDTELKPSGLVGNTDAERTIGVRAMESAKKE
FLNGLRPLVEEMLGSYLKVKARRRLN"
misc_feature 195575..197689
/locus_tag="SARI_00212"
/note="E3 ubiquitin-protein ligase SspH2; Provisional;
Region: PRK15387"
/db_xref="CDD:185285"
misc_feature 195665..>196003
/locus_tag="SARI_00212"
/note="pathogenicity island 2 effector protein SseI;
Provisional; Region: PRK15372"
/db_xref="CDD:185270"
misc_feature 196007..196138
/locus_tag="SARI_00212"
/note="Type III secretion system leucine rich repeat
protein; Region: TTSSLRR; pfam12468"
/db_xref="CDD:204932"
gene 198452..199297
/locus_tag="SARI_00213"
/db_xref="GeneID:5762003"
CDS 198452..199297
/locus_tag="SARI_00213"
/inference="similar to AA sequence:REFSEQ:NP_311541.1"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569302.1"
/db_xref="GI:161502190"
/db_xref="GeneID:5762003"
/translation="MNNWSPEHTKDIKSWFKIDTYRKFEDLSLIQFYHEIWARNLFFK
EYREEFESRTLMGYFSKIFSGNPFLIEEGQLGYMTPANKLFQPPHFFLTTLDRLAETS
IIAMQRGGFLWHEGDNYSINAELREESLSDIMPDQFTRTVMFEIDLASGTDEEIAESL
KAALPQWRKVKGIDENPLESVRFGYGTIKKLISYRVIPMLDILVWAAVKKIRVSDDRL
SRLLYTDDDEESEMRQSSQIKDTDRPLALKSCTTDFIRQFHYFMNKNSHLKQMKVSDV
MKLSD"
gene 199577..199783
/locus_tag="SARI_00214"
/db_xref="GeneID:5762004"
CDS 199577..199783
/locus_tag="SARI_00214"
/inference="protein motif:HMMPfam:IPR010260"
/inference="similar to AA sequence:REFSEQ:YP_001177620.1"
/note="'COG: COG3311 Predicted transcriptional regulator;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569303.1"
/db_xref="GI:161502191"
/db_xref="InterPro:IPR010260"
/db_xref="GeneID:5762004"
/translation="MNNQATRLIRLPEVLERTGYGKAWIYRLISEGRFPAPVKIGVRA
VAFVESEVDEWIQSVIETSRIKVA"
misc_feature 199577..199768
/locus_tag="SARI_00214"
/note="Predicted transcriptional regulator
[Transcription]; Region: AlpA; COG3311"
/db_xref="CDD:225848"
gene 199805..200119
/locus_tag="SARI_00215"
/db_xref="GeneID:5762005"
CDS 199805..200119
/locus_tag="SARI_00215"
/inference="similar to AA sequence:REFSEQ:YP_001005310.1"
/note="'Psort location: cytoskeletal, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569304.1"
/db_xref="GI:161502192"
/db_xref="GeneID:5762005"
/translation="MNIEEFMSEENHMCNLGEDLFGKIFEPGAIYDLPDNEFNRKIVY
WLSQYLVGNLRDPLDAIFELNIFDQFYVYETWFSLIKCPVEMKSLSKRIIQYHIGLKT
LL"
gene 200549..201604
/locus_tag="SARI_00216"
/db_xref="GeneID:5762006"
CDS 200549..201604
/locus_tag="SARI_00216"
/inference="protein motif:Gene3D:IPR013762"
/inference="protein motif:HMMPfam:IPR002104"
/inference="protein motif:superfamily:IPR011010"
/inference="similar to AA sequence:INSD:ABP61567.1"
/note="'COG: COG0582 Integrase;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569305.1"
/db_xref="GI:161502193"
/db_xref="InterPro:IPR002104"
/db_xref="InterPro:IPR011010"
/db_xref="InterPro:IPR013762"
/db_xref="GeneID:5762006"
/translation="MKVIAGSISLLYRFFMRKEINIDERIQKRIFLANHEIDDLIEFT
SFNFKNGGENDFGVSNVKKPTKYFRITTIANYLEWLCKILLSHTGQKDTIKEILVFIN
NIKRKKPRNNDKYIMDIEKSLNKAQLDSLFSILSPGSNLNPFTETVQKRNNLIFLLLH
CFGMRAGELLNLRIGDIDFAESTIAIRRRANDKTDPRVYQPLVKTCERKLIADANLIY
EISDYILNDRRKVKNANKHDFLFITYKEGKTQGQPLSFSSYHKIVSVVRQSSSLLSGL
TGHKLRHTWNYEFSKAIDNSKNISDEKEQQIRSYLMGWVPGSDTSIIYNRRHIFELSK
KTALEQQEQLFKGGFDE"
misc_feature 200984..201514
/locus_tag="SARI_00216"
/note="DNA breaking-rejoining enzymes,
intergrase/recombinases, C-terminal catalytic domain. The
tyrosine recombinase/integrase family share the same
catalytic domain containing six conserved active site
residues. The best-studied members of this diverse
family...; Region: INT_REC_C; cd01182"
/db_xref="CDD:238587"
misc_feature order(201041..201043,201125..201127,201383..201385,
201392..201394,201488..201490)
/locus_tag="SARI_00216"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:238587"
misc_feature order(201041..201043,201383..201385,201392..201394,
201488..201490)
/locus_tag="SARI_00216"
/note="active site"
/db_xref="CDD:238587"
misc_feature order(201041..201043,201392..201394)
/locus_tag="SARI_00216"
/note="catalytic residues [active]"
/db_xref="CDD:238587"
misc_feature order(201041..201046,201125..201127,201380..201385)
/locus_tag="SARI_00216"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238587"
gene 201597..202907
/locus_tag="SARI_00217"
/db_xref="GeneID:5762007"
CDS 201597..202907
/locus_tag="SARI_00217"
/inference="protein motif:Gene3D:IPR013762"
/inference="protein motif:HMMPfam:IPR002104"
/inference="protein motif:superfamily:IPR011010"
/inference="similar to AA sequence:INSD:ABP61566.1"
/note="'COG: COG0582 Integrase;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569306.1"
/db_xref="GI:161502194"
/db_xref="InterPro:IPR002104"
/db_xref="InterPro:IPR011010"
/db_xref="InterPro:IPR013762"
/db_xref="GeneID:5762007"
/translation="MNNLIKHSSDKMSIHEHKIVTSIESHGINIRDLICVMNKSLVCG
FVNTLQYYFCSKSHLYVKTIVKNMKNFINNVSPNYIDDKVIIQYQNMQSANKPSYFRG
LRPFFTKWFESGYPGIDASAIEIAKHFDLKIKKAGQPILQDDPTVGPLTKEEHTSLIK
AMSHAYSIGELSLSDYAISLLISLTGRRPQQLVMLEYKDLLQKNLDTGKVEYLISVPR
VKQRGKQLQYRELPIISEVASIVQLQANHSVRLVEQTLGKTLDDHDKGKVPVFLNEDK
LLDLAIIDFNFLESNKIYAKPTIANRALKNIVNTVNLISNRTGSLLNATPRRLRYTIA
TMLAREGHNANTIAELLDHSSTSSTGIYIKNLAESVERIDSAVSEQLSFVADAFMNGI
KSKEKIHLKFCSSRKCQSQNLNVSFPCNECAFFMPVDIGEVNPR"
misc_feature 202119..202688
/locus_tag="SARI_00217"
/note="DNA breaking-rejoining enzymes,
intergrase/recombinases, C-terminal catalytic domain. The
tyrosine recombinase/integrase family share the same
catalytic domain containing six conserved active site
residues. The best-studied members of this diverse
family...; Region: INT_REC_C; cd01182"
/db_xref="CDD:238587"
misc_feature order(202158..202163,202254..202256,202572..202577,
202680..202682)
/locus_tag="SARI_00217"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238587"
misc_feature order(202158..202160,202254..202256,202575..202577,
202584..202586,202653..202655,202680..202682)
/locus_tag="SARI_00217"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:238587"
misc_feature order(202158..202160,202575..202577,202584..202586,
202653..202655,202680..202682)
/locus_tag="SARI_00217"
/note="active site"
/db_xref="CDD:238587"
misc_feature order(202158..202160,202584..202586,202680..202682)
/locus_tag="SARI_00217"
/note="catalytic residues [active]"
/db_xref="CDD:238587"
gene 202904..204778
/locus_tag="SARI_00218"
/db_xref="GeneID:5762008"
CDS 202904..204778
/locus_tag="SARI_00218"
/inference="protein motif:Gene3D:IPR013762"
/inference="protein motif:superfamily:IPR011010"
/note="'COG: COG4688 Uncharacterized protein conserved in
bacteria;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569307.1"
/db_xref="GI:161502195"
/db_xref="InterPro:IPR011010"
/db_xref="InterPro:IPR013762"
/db_xref="GeneID:5762008"
/translation="MNNIILFKSKKKLTVENNYNEFISFCRYKLSGLTQTQDWEQYVW
KGYVTFRKIGVRYKAFNSKDAMHEDFLDFAKAYIRYQHSLKPLKNYGATMMALRCLEQ
ALLQVLNSGLIYNVTAVVFDEAIQIGSKYFEGNVLAKCGIQLEKLSKFLCEHNLVKSG
YISWKNHVKQKVKKNYLPEIEDYDRNDKLPDEVALLAIADIFSKNDELLSPRDKFTSS
VFALLLCCPSRISEILALPADCEITQKDEKGIERYGLRFYSVKGYGPNIKWIPQVMIP
VAKKAIKRLLSLSQNARAFAQWCEKYPDKFYQHELCPKVDEKSKLTVIEVCHALGYPL
HDHKSCVLKIKKTSLDGGKSFLNPNDYNYSLSELWEMIISGFSRDFPWYDEEKSIRFS
NALCLLNPRQFTLSQIIDIYSFHKPTKGFFFNDIQNKKRHEHGFKNIFARHGYYDIEG
QPLLIRSHQPRHLLNTIAHYGEMSELDIAKWSGRVNVNQNRVYNHVSEEDMLDKIKAI
KLNRSNYCQRESIPTNELAIDFDSLNQGAIHLTEFGYCVHNYLVRPCTKINQFVECNN
ETLNMKSVDRIRLQSVREKVIQLINITQIAFENGDYGADKWLQHHEKNLERINKLLNN
"
misc_feature 202904..204769
/locus_tag="SARI_00218"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4688"
/db_xref="CDD:227032"
gene 204775..205179
/locus_tag="SARI_00219"
/db_xref="GeneID:5762009"
CDS 204775..205179
/locus_tag="SARI_00219"
/inference="similar to AA sequence:INSD:ABP61564.1"
/note="'COG: NOG17703 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569308.1"
/db_xref="GI:161502196"
/db_xref="GeneID:5762009"
/translation="MKQEMHMAKHLNRSEIKAITHMILTWDGKITWSDLCESVYKNLN
RTITRQSLSAHDEVVEAYRTKKNLSNLKKSGLKKPANLTIAAQQILNLKAENEMLKKQ
NNRYKEQFSYWQYNAYRHGLTMEQLNRPFNKK"
gene 205267..205701
/locus_tag="SARI_00220"
/db_xref="GeneID:5762010"
CDS 205267..205701
/locus_tag="SARI_00220"
/inference="similar to AA sequence:INSD:ABP61563.1"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569309.1"
/db_xref="GI:161502197"
/db_xref="GeneID:5762010"
/translation="MHFMDKNIINSEFTLEEQLIIIIDKYISKRYQPGDKSFSYQLYL
IFVGYHLKYFYPKRIYSKSNRNIDNIMAMFSSVYKSLTSNLLQRLNNKEGVLRELNSL
VNYIDNNQEKAEEIYATVRAQYEMKVIEGELTHEVRVRTVRL"
gene complement(205755..206069)
/locus_tag="SARI_00221"
/db_xref="GeneID:5762011"
CDS complement(205755..206069)
/locus_tag="SARI_00221"
/inference="similar to AA sequence:REFSEQ:YP_049171.1"
/note="'Psort location: extracellular, including cell
wall, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569310.1"
/db_xref="GI:161502198"
/db_xref="GeneID:5762011"
/translation="MKIYSILTVILTTCLLTACNSEPSQDDIYNAFKIVVDRSNASMK
ALNSSIPEKDLLRIDYVKKVSCTEEANNVYNCIVDASISNMKQTKPVKLVKADGVWKE
VQ"
gene complement(206088..206474)
/locus_tag="SARI_00222"
/db_xref="GeneID:5762012"
CDS complement(206088..206474)
/locus_tag="SARI_00222"
/inference="protein motif:superfamily:IPR012338"
/inference="similar to AA sequence:REFSEQ:NP_311533.1"
/note="'COG: NOG23803 non supervised orthologous group;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569311.1"
/db_xref="GI:161502199"
/db_xref="InterPro:IPR012338"
/db_xref="GeneID:5762012"
/translation="MNRFITSSFFIIVFLLSGCSTSGNQNLKNETPQSLQSKIIKNKT
TKSELLTKLGEPDTRTTLDDGNEQWKYFMSNNQFSATTFIPVVGLFTGGSQTQSKTLE
IDFKGETVSKWTFSSDNNNTKTGILN"
misc_feature complement(<206355..206474)
/locus_tag="SARI_00222"
/note="lipoprotein NlpI; Provisional; Region: PRK11189"
/db_xref="CDD:236875"
gene 206504..206602
/locus_tag="SARI_00223"
/db_xref="GeneID:5762013"
CDS 206504..206602
/locus_tag="SARI_00223"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569312.1"
/db_xref="GI:161502200"
/db_xref="GeneID:5762013"
/translation="MKLISPYKNNSVCIRSFDFIDKNNDAYEKRKD"
gene complement(206516..206788)
/locus_tag="SARI_00224"
/db_xref="GeneID:5762014"
CDS complement(206516..206788)
/locus_tag="SARI_00224"
/note="'Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569313.1"
/db_xref="GI:161502201"
/db_xref="GeneID:5762014"
/translation="MKNETIKCPFCFTQSPHGVRICIGCHAKVAYGESPLSVAFLFQF
VAFGLAWLAFLWTGSTLVSVLTFFISIIILIYKIKRTYADRVVFIR"
gene complement(207012..208169)
/locus_tag="SARI_00225"
/db_xref="GeneID:5762015"
CDS complement(207012..208169)
/locus_tag="SARI_00225"
/inference="protein motif:HMMPfam:IPR005094"
/inference="similar to AA sequence:REFSEQ:YP_001177613.1"
/note="'COG: NOG10802 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569314.1"
/db_xref="GI:161502202"
/db_xref="InterPro:IPR005094"
/db_xref="GeneID:5762015"
/translation="MQKIKRGKSFAGVVQYALKPGSHHKSNPIVIGGNMLGDSASEVI
AEFDGTKQLRPDVQKAVWHNSLRLPSGESLTAEQWSSIADDYMKRMGFSDTHLRCYVL
HDDQAGQHVHIIASRIDLNGGKLYLGKNENLISTRIISELETRYGLIETAQHKKPRQV
KRRKISRNEEMLSRRTGIPSPKEALQQILDKSLADTPDLLTFIKRLQEAEVSWKANIA
STGKMNGFSFEYTGIAFKASQLGKGYSWANLQKQLNYNPDHLEALQTGIQTKEALPAH
IPMPVPVPVPVPVEQVARDTVRSESIGEKIAEIEMRLREDKRNEIVGKILQKNAVQRQ
KHLRFVEWLASIKHYIELLRSFGKTILHKTHTTFSNIYAMKPSKKARKIRL"
misc_feature complement(207411..208154)
/locus_tag="SARI_00225"
/note="Relaxase/Mobilisation nuclease domain; Region:
Relaxase; pfam03432"
/db_xref="CDD:217554"
gene complement(208147..208398)
/locus_tag="SARI_00226"
/db_xref="GeneID:5762016"
CDS complement(208147..208398)
/locus_tag="SARI_00226"
/inference="similar to AA sequence:REFSEQ:YP_049173.1"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569315.1"
/db_xref="GI:161502203"
/db_xref="GeneID:5762016"
/translation="MASLHKLPTIVPPVNIDTWKTLGEINQKLNRIALHIDSKSKDSQ
LTHTELFVVKRQLEELRQQLLNADIWSKSYEGYAEDQKG"
gene complement(208585..208752)
/locus_tag="SARI_00227"
/db_xref="GeneID:5762017"
CDS complement(208585..208752)
/locus_tag="SARI_00227"
/note="'Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569316.1"
/db_xref="GI:161502204"
/db_xref="GeneID:5762017"
/translation="MTQLIKNSNINKNSLIRILIKFQFNYFVFFKASQPPLNTIMTLT
LKLNMLIKTII"
gene 208828..211734
/locus_tag="SARI_00228"
/db_xref="GeneID:5762018"
CDS 208828..211734
/locus_tag="SARI_00228"
/inference="protein motif:HMMPfam:IPR001650"
/inference="protein motif:HMMPfam:IPR011545"
/inference="protein motif:HMMSmart:IPR001650"
/inference="protein motif:HMMSmart:IPR014001"
/inference="similar to AA sequence:REFSEQ:ZP_01462331.1"
/note="'KEGG: nph:NP0492A 8.9e-35 mer3_1; ATP-dependent
DNA helicase 1 K03726;
COG: COG1204 Superfamily II helicase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569317.1"
/db_xref="GI:161502205"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="GeneID:5762018"
/translation="MKYGLPVNCGIDEDVSSPLFYKENDEFCLTDVQYESLDRGVGKG
KSVLVVSPTSTGKTLVGTVALTQGIQEGKNAVFLVTHRALARQKFEDFKKQLLKDFLD
NDPSALVLATGDIIEDAFGNTVPSPLNAKLMVATYEKYLGILSASGVPKSMKSTVFVC
DEIQLIGDENRGQQVEILLTLIKRAGWAQLVGLSAVLEHRDALKLSQWLEIELIYTST
REKHLTYQCHAHNGEVYSCSTKSPEEITSIKSKQPTSSIARTIKNYLEKNKELTPIIV
FCMTKKETYTLAQSLVSEYKSPFNTQMDFDFDGVPETLANNMLKEFVQYRVACHSADL
IDEEREIIERKILDKEIDVVFATSTLAAGVNFPLGTAFFASWQRWNSDLRKNIPIGSS
EFHNMAGRVGRMGSDHSEGNIIYFSNNNADLTSALKYLKFSDMPPLKSRIEPKGFNRL
ILQLVASGLSNNIIDLKDIVFNTLSGIVEQDTNLKSFNTWDGCLDTSLDMLTAEGLLI
KTAAGDLHATSFGKAVSLAGFNPESGVNLLKYFAKYSNWFSQCIFDIESNGNYKKLII
SIFYACFSCPEFISYQGKRPTRYLPYMFTRAVLLDPSKLDIPLYENIWQANLPSINAA
KLAFEWIEGEQLRKLEDTFEALTAGMLNDLYRNLAWLLKGVSTIVMACADTRIASDLR
PSFLNDEVVNDLRLLPRFINRLAFRVNTGLTDKALWLTTLNKIYPERGFKLTRIEMLN
ISSSEYYKPEYLSQGEQEAEEFRLELFKNIKPTPHKKSNWLRDAAKVWKINQRSLAAE
RHVLKSKKIGFEKQFKTYYDARGIEYEQAFEVLLSLAEINYIKLDDGKRTGAPDYLLS
FTNSPDIVVELKTKLGENLVDFNGATDVLRASELYGYGDNFCVTLCHPGVDPSVLPII
EKCGRLSIVEGHDLGEALLRLLSGNLTQEQLWQWLSIPGAASAEDLPMKEYSFN"
misc_feature 208912..209490
/locus_tag="SARI_00228"
/note="DEAD-like helicases superfamily; Region: DEXDc;
smart00487"
/db_xref="CDD:214692"
misc_feature 208981..209412
/locus_tag="SARI_00228"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:238005"
misc_feature 208987..209001
/locus_tag="SARI_00228"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238005"
misc_feature 209308..209319
/locus_tag="SARI_00228"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:238005"
misc_feature 209761..210042
/locus_tag="SARI_00228"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cl17351"
/db_xref="CDD:247905"
gene 211866..212681
/locus_tag="SARI_00229"
/db_xref="GeneID:5762019"
CDS 211866..212681
/locus_tag="SARI_00229"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569318.1"
/db_xref="GI:161502206"
/db_xref="GeneID:5762019"
/translation="MLNITDRRIIYCLPSIFCQETIKLGNLLIRPLSEAVKDNDNCAK
LLMDFPFNRASSVIETLTFKSGDFFTQLNDLEIRDSLEILKFSYFFEFPSSLLDINGF
VGNETFECYPVIELNSELTCFGVEHKMPFTNGMSNYLLSLKSYFQYRTVFLENFSLRL
TQKDFSYYSVFYGLNKKIDTLDLFKMYNKCWGVYSAYDFSDKALYSKITLELLSSRHV
ANGNKVGKTFTLFFEKLRRIIGSIADDELFHVYKEKIDSKIDIVTKRIEDYFF"
gene 212683..213030
/locus_tag="SARI_00230"
/db_xref="GeneID:5762020"
CDS 212683..213030
/locus_tag="SARI_00230"
/note="'Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569319.1"
/db_xref="GI:161502207"
/db_xref="GeneID:5762020"
/translation="MNIERKNIAHEGKSSHQFINVAPYLVFFPVFLMVLECSDDIQRK
DIYRFIFLLSLFMYEVDSWQMIDFETFPSKRTHLQSYINFSRCYHKYVKDNKESAKYM
LIGFENWLKEIDG"
gene 213073..214737
/locus_tag="SARI_00231"
/db_xref="GeneID:5762021"
CDS 213073..214737
/locus_tag="SARI_00231"
/inference="protein motif:HMMPfam:IPR002641"
/inference="similar to AA sequence:INSD:EDK33637.1"
/note="'KEGG: fnu:FN1704 1.3e-07 serine protease;
COG: COG1752 Predicted esterase of the alpha-beta
hydrolase superfamily;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569320.1"
/db_xref="GI:161502208"
/db_xref="InterPro:IPR002641"
/db_xref="GeneID:5762021"
/translation="MKNEKPTIECLAVFEGGGAKGIAFAGALEAAEEQGIKFSGYGGA
SSGAIIALLSCFGYKGSEIKSKLKRDKIINLLDKKFLILFYWVRFMSRINYFLSLTFL
RKKIPYANCCIGLLFFIPRVFSFVICYLNPISIFTCFFTLITIGVQKGIFKTDKLVET
LREYAFDKVYLEVSNSEDRKEKIRSLTFLELEKITGVKLKVIATDILTGTAVELSSIT
TPDELVFESVAASSSYPIFFRPSIIKNQILTDGGISCNLPSFLFNPHEFNRLPVYAFD
LRTRFFMREDAGKIKISIFLKKLTMSMIDASNNIISDVTGGIIVPVIVSPRFGTFSFN
LSDEQLDKIFNQGKVSAKRFMKRDFFTSSMLPAKEYHMYASLIYGNVDYLLKLIQNEI
EILIEGVKLQINLYTDITTNQSRIVAFSHSNNFNCKAEYNSYDLVDSDAVCVNAWNNK
QIFYSYDESNNRTKIFYPIERSNRFDANYNGLNNKMLALLELEFQAHYLDISFFEDNT
IGGAKSIKEVDFSEDSATIIDGYCFVIRNSMLGHQAIFHESKNTHH"
misc_feature 213106..>213390
/locus_tag="SARI_00231"
/note="Patatins and Phospholipases; Region:
Patatin_and_cPLA2; cl11396"
/db_xref="CDD:245598"
misc_feature order(213121..213126,213130..213132,213205..213207)
/locus_tag="SARI_00231"
/note="active site"
/db_xref="CDD:132836"
misc_feature 213199..213213
/locus_tag="SARI_00231"
/note="nucleophile elbow; other site"
/db_xref="CDD:132836"
misc_feature <213472..213879
/locus_tag="SARI_00231"
/note="ExoU and VipD-like proteins; homologus to patatin,
cPLA2, and iPLA2; Region: Pat_ExoU_VipD_like; cd07207"
/db_xref="CDD:132846"
gene 214753..214938
/locus_tag="SARI_00232"
/db_xref="GeneID:5760671"
CDS 214753..214938
/locus_tag="SARI_00232"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569321.1"
/db_xref="GI:161502209"
/db_xref="GeneID:5760671"
/translation="MKNNDKIVSGSQARDPSKMQFKSNYQNMYTDEGIIVLDAAKERI
KRRQKEINRSRQLADLD"
gene complement(215199..216470)
/locus_tag="SARI_00233"
/db_xref="GeneID:5763478"
CDS complement(215199..216470)
/locus_tag="SARI_00233"
/inference="protein motif:Gene3D:IPR013762"
/inference="protein motif:HMMPfam:IPR002104"
/inference="protein motif:superfamily:IPR010998"
/inference="protein motif:superfamily:IPR011010"
/inference="similar to AA sequence:REFSEQ:YP_001005326.1"
/note="'COG: COG0582 Integrase;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569322.1"
/db_xref="GI:161502210"
/db_xref="InterPro:IPR002104"
/db_xref="InterPro:IPR010998"
/db_xref="InterPro:IPR011010"
/db_xref="InterPro:IPR013762"
/db_xref="GeneID:5763478"
/translation="MGPTKKGPKTEGPKMAKIAKKLTDTEIKSTKPADKEINLFDGDG
LILRIAPLSKGGKKNWYFRYAVPVSKKRTKMSLGTYPHLTLARARALRDEYLSLLANG
IDPQVHNNDKANALKNATEHTLQTVARKWLDEKVKTSGISQDHAEDIWRSLERNIFPG
LGNVPVNEIRPKLLKQHLDPIEQRGVLETLRRIISRLNEIFRYAATEELIEFNPADNL
GQRFSKPKKQNMPALPPSELPRFLVALNNASIRLETRLLIEWQLLTWVRPGEAVCTRW
TDIDTDNSMWNIPAEFMKMKKPHKVPLSKEALRVLNSMKAISGHREWVFPSIKAPLNH
MHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTEVLEAALAHSKKDEIIAA
YNRAEYLTERVALMQWWSDYVQTQKVKAIAA"
misc_feature complement(215229..216428)
/locus_tag="SARI_00233"
/note="integrase; Provisional; Region: PRK09692"
/db_xref="CDD:170049"
misc_feature complement(215238..216314)
/locus_tag="SARI_00233"
/note="Bacteriophage P4 integrase. P4-like integrases are
found in temperate bacteriophages, integrative plasmids,
pathogenicity and symbiosis islands, and other mobile
genetic elements. They share the same fold in their
catalytic domain and the overall...; Region: INT_P4;
cd00801"
/db_xref="CDD:238416"
misc_feature complement(order(215292..215294,215322..215324,
215394..215396,215403..215405,215589..215591,
215670..215672))
/locus_tag="SARI_00233"
/note="active site"
/db_xref="CDD:238416"
misc_feature complement(order(215292..215294,215322..215324,
215394..215396,215403..215405,215589..215591,
215670..215672))
/locus_tag="SARI_00233"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:238416"
gene complement(216595..216957)
/locus_tag="SARI_00234"
/db_xref="GeneID:5763479"
tmRNA complement(216595..216957)
/locus_tag="SARI_00234"
/inference="nucleotide motif:Rfam:RF00023"
/note="Rfam score 245.08"
/db_xref="GeneID:5763479"
gene complement(217029..218219)
/locus_tag="SARI_00235"
/db_xref="GeneID:5763480"
CDS complement(217029..218219)
/locus_tag="SARI_00235"
/inference="protein motif:HMMPfam:IPR006143"
/inference="protein motif:HMMTigr:IPR010129"
/inference="protein motif:ScanRegExp:IPR006144"
/inference="protein motif:superfamily:IPR011053"
/inference="similar to AA sequence:REFSEQ:YP_217682.1"
/note="'COG: COG0845 Membrane-fusion protein;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569323.1"
/db_xref="GI:161502211"
/db_xref="InterPro:IPR006143"
/db_xref="InterPro:IPR006144"
/db_xref="InterPro:IPR010129"
/db_xref="InterPro:IPR011053"
/db_xref="GeneID:5763480"
/translation="MKTSQHDAAMDDPDIHREREFSGAGRIVLICSLLFLILGVWAWF
GRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASN
VGESAAKYRASLASSARLTAEVSDLPLAFPDELNDWPDLIDAETRLYKSRRAQLADTE
VELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQARE
ALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIV
PVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLEGVVETISPDTIQDKVK
PEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKIIVDYLIKPFNRAKEA
LRER"
misc_feature complement(217032..218141)
/locus_tag="SARI_00235"
/note="type I secretion membrane fusion protein, HlyD
family; Region: type_I_hlyD; TIGR01843"
/db_xref="CDD:130902"
misc_feature complement(217224..217487)
/locus_tag="SARI_00235"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:222128"
gene complement(218200..220380)
/locus_tag="SARI_00236"
/db_xref="GeneID:5763481"
CDS complement(218200..220380)
/locus_tag="SARI_00236"
/inference="protein motif:BlastProDom:IPR003439"
/inference="protein motif:HMMPfam:IPR001140"
/inference="protein motif:HMMPfam:IPR003439"
/inference="protein motif:HMMSmart:IPR003593"
/note="'KEGG: pen:PSEEN0144 1.1e-95 type I toxin efflux
ATP-binding protein;
COG: COG2274 ABC-type bacteriocin/lantibiotic exporters,
contain an N-terminal double-glycine peptidase domain;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569324.1"
/db_xref="GI:161502212"
/db_xref="InterPro:IPR001140"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:5763481"
/translation="MTRAAPDVEEILSERDLSQWAQAISHVAGHYRVACSPGSIQANA
PWFRGKSRTTALTHLSRQAGLSFHAPGIDKAAFSQWRLPLVVELRDGQLLVIEHANGE
DAVDVFMIEEEGQRNRLTFSELLPQIIYVAALRPLSALKDSRVDRYISRFKPDWMREL
VLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLF
GFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIRE
MITSSTLATIVDLPFFFLFMIVLAVIAPPLAWIAPVSALLMILPGVALQKKLAVLANQ
AAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLIS
WGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQV
KAAKMGLDNIMQLPTETQHDDSLVRRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEI
MPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQ
NARLFFGTLRENLTLGAPHASDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSG
GQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPV
LELVERVVVLKEGQLVMDAPKAQALNADRIQSHRREWKNENQSA"
misc_feature complement(218254..220323)
/locus_tag="SARI_00236"
/note="type I secretion system ATPase, LssB family;
Region: type_I_sec_LssB; TIGR03375"
/db_xref="CDD:234189"
misc_feature complement(219070..>219708)
/locus_tag="SARI_00236"
/note="ABC transporter transmembrane region; Region:
ABC_membrane; pfam00664"
/db_xref="CDD:216049"
misc_feature complement(218281..218940)
/locus_tag="SARI_00236"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature complement(218806..218829)
/locus_tag="SARI_00236"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(order(218347..218349,218440..218445,
218683..218685,218803..218811,218815..218820))
/locus_tag="SARI_00236"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature complement(218683..218694)
/locus_tag="SARI_00236"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature complement(218488..218517)
/locus_tag="SARI_00236"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature complement(218440..218457)
/locus_tag="SARI_00236"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature complement(218422..218433)
/locus_tag="SARI_00236"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(218341..218361)
/locus_tag="SARI_00236"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene complement(220377..221786)
/locus_tag="SARI_00237"
/db_xref="GeneID:5763482"
CDS complement(220377..221786)
/locus_tag="SARI_00237"
/inference="protein motif:HMMPfam:IPR003423"
/inference="protein motif:HMMTigr:IPR010130"
/inference="similar to AA sequence:REFSEQ:NP_461619.1"
/note="'COG: COG1538 Outer membrane protein;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569325.1"
/db_xref="GI:161502213"
/db_xref="InterPro:IPR003423"
/db_xref="InterPro:IPR010130"
/db_xref="GeneID:5763482"
/translation="MGRVTPAAIVLAFALFHHQTRGAEAPPIITSEGLATDQMLPSLD
GSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAVGKLLAQNEQIEVARSKYYPQVS
AGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDT
VAHETANAIVQTQSWQQMVEAAEEQLVALDGIGKLTRQRSDEGATSLSDVVQTEARIE
SARSQLAQYQANLDSARASLMSWLGWKSLNSISNDFPAKLARSCEIVTPDDRLVPAVL
AAWAQANVARANLEYANAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMP
IYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRRRLMEARSQAMSLASALQILRRQQQ
LSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGA
LRQAFALNHRSIQSVEIQP"
misc_feature complement(220392..221612)
/locus_tag="SARI_00237"
/note="type I secretion outer membrane protein, TolC
family; Region: type_I_sec_TolC; TIGR01844"
/db_xref="CDD:233594"
gene complement(221852..233353)
/locus_tag="SARI_00238"
/db_xref="GeneID:5763483"
CDS complement(221852..233353)
/locus_tag="SARI_00238"
/inference="protein motif:superfamily:IPR008957"
/inference="protein motif:superfamily:IPR008964"
/inference="protein motif:superfamily:IPR008979"
/inference="protein motif:superfamily:IPR011048"
/inference="protein motif:superfamily:IPR011049"
/note="'KEGG: chu:CHU_1906 3.9e-51 CHU large protein,
possible SAP or adhesin AidA-related K01238;
COG: COG5295 Autotransporter adhesin;
Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569326.1"
/db_xref="GI:161502214"
/db_xref="InterPro:IPR008957"
/db_xref="InterPro:IPR008964"
/db_xref="InterPro:IPR008979"
/db_xref="InterPro:IPR011048"
/db_xref="InterPro:IPR011049"
/db_xref="GeneID:5763483"
/translation="MRLLAVVSKLTGVSTTVESSAVTLNAPSIVKLSVARDEISQLTR
INQDLMVTLHSGETITIKNFYVTNDLGASQLVLAESDGTLWWVENPQAGLHFEQIADI
NELLVTSGASHETGGAVWPWVLAGAVAAGGIAAIASSGGGDSHHSDSDNPLPDNTNPG
GNPPDNTNPDGNPPDNDNPGGTNPDGNNPDSSNPVDTTPPLAPSELLISADGKTVSGQ
AEAGSTITIKDPSGNVVGEGKTDSNGKFSIDLTTPHLSGEQLTVTATDDAGNTGPSAT
IDAPNIPFPDTPIITAAIDNADPLTGTLSNNQFTNDSTPTLEGTGSAGAVIHIYANGQ
EIGTTTVDASGNWRFSITNALTDGENRFTAIATNVKGESSESASFTLTIDTLSPDAPI
VELITDNTGLLTGPLQNNDRTDEAKPLFSGQGEPGNTITIKEGSTIIGSATVDENGRW
TFMPTTPLSNGEHTFTVEQSDQAGNVSRVTTTPTIIVDTTPPDAAAIDNVAKDGSTVS
GTAEAGSTVSIYDPAGNYLGSAITGDNNQFNITLNPAQTHGERLEARIQDAVGNIGPV
TEFTASDSQYPAQPIILTVTDDAGAVTGLLKNGDATDDNRPTLSGTAEPGSTISISDN
GFPVPTFPLVVADADGKWSFTPSLALPDGDHVFTATATNDRGTSGQSVSFTIDIDTQP
PVLENLAVSDIGDKLTGATEAGSTVVIKDSQGNMLGSGTAGDDGTFSISISPAKINGE
TLSISVIDKAANSGPVETLNAPDKTAPAAPNGLIVATDGLSVSGQAEAGSTVTIRDSS
NTVLGSAVANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPK
DVVISEDGASISGTAEPGSAITITTSDGTPLGSGKVDGEGHFTLPLVPAQTNGEQVTV
TATDGANNVSPPATAQAPDITAPDKPIISQVLDDVESFTGPLANGQTTNDSRPTLSGT
AEAGARVEVFDNGVSLGLATLQSNGSWTFTPLQNLSEGAHRLTVIATDAKGNASPAAS
FDLVVDTQSPQQPVITFITDDAPGMLGSIAHLGLTNDNTPTINGTGEPGSTVHLYQNG
ARIADIIVGSSGVWSYAYTTASPLVDDTYTFTVTASDSNGNTTPFSTDFTITIDTLVP
AAPGIISVADGDGNTIDTNQLTQESQPRLSGSGTAGDTIILYDNGNIIGQALVGADGR
WQFTPPAALGDGTHLLTARANDPAGNESPESISFTLRVDTQAPDAPQIVSAAIAGGEG
EVLLANGSITNQRMPTLSGTGEPGAIITLYNNGAVLDTVQVNPQGSWTYPLTSNLSEG
LNVLTAIAMDAAGNSSPTSGVFSVTLDTLPPAQPDAPLISDNVAPVIGNIGNNGATND
TTPTFSGTGEIGSTIILYNNGSEIGRTTVGDNGSWNFTPAALTPGTYIITVTETDVAG
NISPPSASVTFAIDITAPANPVITFAEDNVGDVQDNVASGATTDDNTPVIHGTGDIGS
VITLYNGGNVLGVATVDETGTWTLPVTSALPDGTYTLTAIAADAAGNSSGVSNSFTLT
VDTVPLQPPVVSEILDDVAPVTGPLTDGAFTNDRTLTINGSGENGSTVTIYDNGIEIG
TALVSDGTWTFNTPVLSEASHALTFSATDGAGNTTAQTQPIIITIDVTAPPAPSIQTV
ADDGTRVAGLADPYATVEIRNADDILVGSAVANATGEFAVTLSPAQTDGGTLTAIALD
RAGNNGPATDFLASDSGLPAVPVITAIEDNVGSVQGNIAAGGATDDATPTLRGTTDIG
STVEVFIDGDSAGFATVDASGNWIFEIATPLSESAHSVTVQATNAKGQGGLSEPVRIT
IDLSAPAQPIITSATDDVPGVTGTLDNGALTNDSRPTLNGTGEAGATIRILDNGVEIG
SATVDQSGNWRFTPNAPLESNTHLFTAVATDPAGNSGQPSDGFTLTIDALAPDVPVII
SVIDDNNQPSIPVSPGQSTDDRQPILNGTGEPGATITIFDNGTPLGTTQVNESGSWSF
PVTSNLSEGSHDLTVSATDPAGNTSAVSTPWTIVVDITPPAIPVLTSVVDDRPGITGD
LVSGQLTNDATPTLNGRGEAGATITVYLDGNPTPIGTTTVNSDGTWSFTPQTPIANGN
HTLTLSATDPAGNSSAVSSGFVLTIDATPPAAPVIASVADNTAPVTGIVPNGGSTNET
RPTLAGTGEAGSTISIYNGSALVGTAQVQANGSWSFTPPTSLSAGVWNLTATATDAAG
NTSVASETRTFTIDTTAPAAPVISTVYDGTGPITGNLSPGQMTDEVRPVISGTREANT
TIRLYDNGTLLAEIPADNSSSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFV
VDTTPPLAPVITSVSDDQAPGLGTIANGQSTNDPTPTFSGTAEAGATITLYENGTVIG
TTTAQPDGAWSVSTSTLASGTHVITAVATDAAGNGSPNSTAFTLTVDTTAPQTPILTS
VVDDVAGGATGNLANGQITNDNRPTLNGTAEAGSVVSIYDGGTLLGVTTADAGGAWSF
APTTGLSDGTRTLTVTATDPAGNVSPVTDSFTIVVDTLAPTVPLITSIVDDVPNNTGA
IGNGQSTNDTLPTLNGTAEANSTVSIFDNGALVATVTANANGNWSWTPTTALGQGSHA
YSVSAADAAGNVSAASQPTTIIVDTIAPGAPGNLTINATGNRVTGTAEAGSTVTITTD
TGVVLGTATADGTGSFSAALTPAQTNGQPLLAFAQDKAGNTGITAGFTAPDTRVPEAP
IITTVVDDVGIYTGAIANGQVTNDAQPTLNGTAQAGATVSIYNNGALLGTTTANASGN
WSFTPAGNLTEGSHAFTATATNANGTGSVSTAATVIVDTQAPGTPSGTLSADGGSLSG
LAEANSTVTVTLAGGITLTTTAGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLG
ITAPILPLAARDNITSLDLTSTADTSTQNYSDYGLLLVGALGNVASVLGNDIAQVEFT
IAEGGTGDVTIDAAATGIVLSLLSTQEIVVQRYDTSLGAWTTIVNTAVGDFANLLTLT
GSGVTLNLSGLGEGQYRVLTYNTSLLATGSYTSLDVDVHQTSAGIISGPTMSTGNVMA
DDTAPTGTTVTAITNANGVSTPVGAGGVDIQGQYGTLHINQDGSYTYTLTNPTAGYGH
KESFTYTITQNGVGSSSAQLVINLGPAPVPGSVVATDNNASLVFDTHVSYVNNGPSTQ
SGVTVLSVGLGNVLNANLLDDMTNPIIFNVEEGATRTMTLQGTVGGVSLASSFDLYVY
RFNDAIQQYEQFRVQKGWINTLLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTL
TISQDHTYAVDSITTSTTGNVLTNDVAPADALLTEVNGVAISATGTTNVNGLYGTLTI
DAKGNYTYTLKNGVGADSIKTPDSFIYTVKAPNGDTDTASLNITPTARALDAINDVSD
TLSVATLQDTAAWLDSSVGSASWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLIT
LGNLNISWAILENGTVIRNGTVPVANITLGGATVTVNLSGLELDAGTYTLNFTGTNTL
AGAATITPRVIGTTVDLDNFETSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLNISGYN
GSASTLDASTNTTSATIQGHYGTLQINLDGAYTYTLNNGIAISSITSKEVFTYQLDDK
MGHTDSATLTIDMVPQIVSTNQNDVLIGSAYGDTLIYHLLNGADATGGNGTDRWQNFS
TAQGDKIDIHELLTGWDHQAATLGNFVQVHTSGANTVISVDRDGAGSAFKSTDLVTLE
NVQLTLNDLLQNNHLVIGG"
misc_feature complement(232190..232342)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(231305..231454)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(230234..230383)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(229613..229759)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(228992..229141)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(228683..228835)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(<228425..228538)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(227186..227341)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(226868..227023)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(226556..226711)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(226244..226390)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(225440..226330)
/locus_tag="SARI_00238"
/note="Putative flagellar system-associated repeat;
Region: SWM_repeat; pfam13753"
/db_xref="CDD:222362"
misc_feature complement(225935..226087)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(225620..225775)
/locus_tag="SARI_00238"
/note="Bacterial Ig-like domain (group 3); Region:
Big_3_4; pfam13754"
/db_xref="CDD:222363"
misc_feature complement(221864..222106)
/locus_tag="SARI_00238"
/note="type I secretion C-terminal target domain (VC_A0849
subclass); Region: T1SS_VCA0849; TIGR03661"
/db_xref="CDD:234299"
gene 233648..233782
/locus_tag="SARI_00239"
/db_xref="GeneID:5763484"
CDS 233648..233782
/locus_tag="SARI_00239"
/note="'Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569327.1"
/db_xref="GI:161502215"
/db_xref="GeneID:5763484"
/translation="MGWQTIKDGFLFIFMFYRIFLIFIFCFFNIITPPFVKVFSNIKF
"
gene complement(233968..234495)
/gene="smpB"
/locus_tag="SARI_00240"
/db_xref="GeneID:5763485"
CDS complement(233968..234495)
/gene="smpB"
/locus_tag="SARI_00240"
/inference="protein motif:BlastProDom:IPR000037"
/inference="protein motif:HMMPfam:IPR000037"
/inference="protein motif:HMMTigr:IPR000037"
/inference="protein motif:ScanRegExp:IPR000037"
/inference="similar to AA sequence:REFSEQ:YP_217675.1"
/note="binds to ssrA RNA (tmRNA) and is required for its
successful binding to ribosomes; also appears to function
in the trans-translation step by promoting accommodation
of tmRNA into the ribosomal A site; SmpB protects the
tmRNA from RNase R degradation in Caulobacter crescentus;
both the tmRNA and SmpB are regulated in cell
cycle-dependent manner; functions in release of stalled
ribosomes from damaged mRNAs and targeting proteins for
degradation"
/codon_start=1
/transl_table=11
/product="SsrA-binding protein"
/protein_id="YP_001569328.1"
/db_xref="GI:161502216"
/db_xref="InterPro:IPR000037"
/db_xref="GeneID:5763485"
/translation="MGCFRYQITYEFTTLMTKKKAHKPGSATIALNKRARHEYFIEEE
FEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRT
RKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKER
EWQLDKARIMKHAGR"
misc_feature complement(234052..234402)
/gene="smpB"
/locus_tag="SARI_00240"
/note="Small protein B (SmpB) is a component of the
trans-translation system in prokaryotes for releasing
stalled ribosome from damaged messenger RNAs; Region:
SmpB; cd09294"
/db_xref="CDD:187755"
misc_feature complement(order(234079..234081,234163..234180,
234265..234267,234316..234318,234325..234330,
234334..234339,234343..234360))
/gene="smpB"
/locus_tag="SARI_00240"
/note="SmpB-tmRNA interface; other site"
/db_xref="CDD:187755"
gene 234620..235075
/locus_tag="SARI_00241"
/db_xref="GeneID:5763486"
CDS 234620..235075
/locus_tag="SARI_00241"
/inference="protein motif:HMMPfam:IPR005031"
/inference="protein motif:ScanRegExp:IPR004827"
/inference="similar to AA sequence:REFSEQ:NP_457156.1"
/note="'KEGG: tfu:Tfu_1222 0.00068 actinorhodin polyketide
synthase bifunctional cyclase/dehydratase K05554;
COG: COG2867 Oligoketide cyclase/lipid transport protein;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569329.1"
/db_xref="GI:161502217"
/db_xref="InterPro:IPR004827"
/db_xref="InterPro:IPR005031"
/db_xref="GeneID:5763486"
/translation="MLMGIAMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCVGSR
VLESSPAQMTAAVDVSKAGISKTFTTRNQLTRNQSILMHLVDGPFKKLIGGWKFTPLS
PEACRIEFQLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYRAG"
misc_feature 234647..235060
/locus_tag="SARI_00241"
/note="Coenzyme Q-binding protein COQ10p and similar
proteins; Region: COQ10p_like; cd07813"
/db_xref="CDD:176855"
misc_feature order(234647..234649,234653..234655,234659..234661,
234686..234694,234698..234703,234746..234748,
234776..234778,234782..234784,234788..234790,
234794..234796,234827..234829,234833..234835,
234839..234841,234857..234859,234863..234865,
234896..234901,234905..234907,234911..234913,
234941..234943,234947..234949,234953..234955,
234959..234961,234992..235006,235010..235018,
235022..235030,235037..235039)
/locus_tag="SARI_00241"
/note="putative coenzyme Q binding site [chemical
binding]; other site"
/db_xref="CDD:176855"
gene 235080..235355
/locus_tag="SARI_00242"
/db_xref="GeneID:5763487"
CDS 235080..235355
/locus_tag="SARI_00242"
/inference="protein motif:HMMPfam:IPR005346"
/inference="similar to AA sequence:INSD:CAD05864.1"
/note="'COG: COG2914 Uncharacterized protein conserved in
bacteria;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569330.1"
/db_xref="GI:161502218"
/db_xref="InterPro:IPR005346"
/db_xref="GeneID:5763487"
/translation="MVEVAYALPKKQYLLRVTLEQGATVEEAIRASGLLELRTDIDLA
KNKVGVYSRPVKLTDTVQDGDRVEIYRPLIADPKALRRQRAEKSAGR"
misc_feature 235083..235352
/locus_tag="SARI_00242"
/note="hypothetical protein; Validated; Region: PRK01777"
/db_xref="CDD:234982"
gene complement(235515..235853)
/locus_tag="SARI_00243"
/db_xref="GeneID:5763488"
CDS complement(235515..235853)
/locus_tag="SARI_00243"
/inference="protein motif:HMMPfam:IPR007450"
/inference="protein motif:ScanRegExp:IPR002048"
/inference="similar to AA sequence:REFSEQ:YP_217672.1"
/note="'COG: COG2913 Small protein A (tmRNA-binding);
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569331.1"
/db_xref="GI:161502219"
/db_xref="InterPro:IPR002048"
/db_xref="InterPro:IPR007450"
/db_xref="GeneID:5763488"
/translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVA
KVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLT
HIDNKPALTK"
misc_feature complement(235518..235853)
/locus_tag="SARI_00243"
/note="outer membrane biogenesis protein BamE;
Provisional; Region: PRK11548"
/db_xref="CDD:183190"
misc_feature complement(235539..235751)
/locus_tag="SARI_00243"
/note="SmpA / OmlA family; Region: SmpA_OmlA; pfam04355"
/db_xref="CDD:202983"
gene complement(236003..237664)
/locus_tag="SARI_00244"
/db_xref="GeneID:5763489"
CDS complement(236003..237664)
/locus_tag="SARI_00244"
/inference="protein motif:HMMPfam:IPR003395"
/inference="protein motif:HMMTigr:IPR004604"
/inference="similar to AA sequence:INSD:AAO70209.1"
/note="'KEGG: yps:YPTB0915 3.2e-06 sbcC; putative
ATP-dependent dsDNA exonuclease K03546;
COG: COG0497 ATPase involved in DNA repair;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="recombination and repair protein"
/protein_id="YP_001569332.1"
/db_xref="GI:161502220"
/db_xref="InterPro:IPR003395"
/db_xref="InterPro:IPR004604"
/db_xref="GeneID:5763489"
/translation="MLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGL
CLGGRAEADMVRTGATRADLCARFSLKDTPAALRWLEENQLEEGRECLLRRVISSDGR
SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLDSYANESALAQLMA
AHYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLA
NSGQLLTTSQNALALLADGEDVNLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQ
LTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPEALPQLHQSLLEEQQ
QLDDQADSLETLTLAVNKHRQQALETAQALHQQRLFYAQELGQLITESMHQLSMPHGL
FTIDVKFDEHHLSSDGADRVEFKVTTNPGQPLQPIVKVASGGELSRIALAIQVITARK
METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHFFVSKE
TDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA"
misc_feature complement(236006..237664)
/locus_tag="SARI_00244"
/note="recombination and repair protein; Provisional;
Region: PRK10869"
/db_xref="CDD:236781"
misc_feature complement(<237221..237661)
/locus_tag="SARI_00244"
/note="ATP-binding cassette domain of RecN; Region:
ABC_RecN; cd03241"
/db_xref="CDD:213208"
misc_feature complement(237557..237580)
/locus_tag="SARI_00244"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213208"
misc_feature complement(order(237248..237250,237554..237562,
237566..237571))
/locus_tag="SARI_00244"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213208"
misc_feature complement(237248..237259)
/locus_tag="SARI_00244"
/note="Q-loop/lid; other site"
/db_xref="CDD:213208"
misc_feature complement(236057..>236467)
/locus_tag="SARI_00244"
/note="ATP-binding cassette domain of RecN; Region:
ABC_RecN; cd03241"
/db_xref="CDD:213208"
misc_feature complement(236345..236374)
/locus_tag="SARI_00244"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213208"
misc_feature complement(236285..236302)
/locus_tag="SARI_00244"
/note="Walker B; other site"
/db_xref="CDD:213208"
misc_feature complement(236267..236278)
/locus_tag="SARI_00244"
/note="D-loop; other site"
/db_xref="CDD:213208"
misc_feature complement(236186..236206)
/locus_tag="SARI_00244"
/note="H-loop/switch region; other site"
/db_xref="CDD:213208"
unsure 236847..236995
/note="Sequence derived from one plasmid subclone"
unsure 237156..237258
/note="Sequence derived from one plasmid subclone"
gene complement(237750..238628)
/locus_tag="SARI_00245"
/db_xref="GeneID:5763490"
CDS complement(237750..238628)
/locus_tag="SARI_00245"
/inference="protein motif:HMMPfam:IPR002504"
/inference="similar to AA sequence:PDB:2AN1"
/note="'KEGG: spt:SPA2542 1.9e-137 yfjB; Probable
inorganic polyphosphate/ATP-NAD kinase K00858;
COG: COG0061 Predicted sugar kinase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="inorganic polyphosphate/ATP-NAD kinase"
/protein_id="YP_001569333.2"
/db_xref="GI:448236184"
/db_xref="InterPro:IPR002504"
/db_xref="GeneID:5763490"
/translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCAQGYEVIVEQQIA
HELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLT
DLDPDNALQQLSDVLEGRYISEQRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI
EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
RPLVINSNSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
YFNTLSTKLGWSKKLF"
misc_feature complement(237753..238628)
/locus_tag="SARI_00245"
/note="inorganic polyphosphate/ATP-NAD kinase;
Provisional; Region: ppnK; PRK03378"
/db_xref="CDD:235122"
misc_feature complement(237756..238565)
/locus_tag="SARI_00245"
/note="inorganic polyphosphate/ATP-NAD kinase;
Provisional; Region: ppnK; PRK02231"
/db_xref="CDD:167337"
gene 238581..239345
/locus_tag="SARI_00246"
/db_xref="GeneID:5763491"
CDS 238581..239345
/locus_tag="SARI_00246"
/inference="protein motif:FPrintScan:IPR000740"
/inference="protein motif:Gene3D:IPR009012"
/inference="protein motif:Gene3D:IPR013805"
/inference="protein motif:HMMPfam:IPR000740"
/inference="protein motif:ScanRegExp:IPR000740"
/inference="protein motif:superfamily:IPR009012"
/inference="similar to AA sequence:REFSEQ:YP_217670.1"
/note="with DnaK and DnaJ acts in response to hyperosmotic
and heat shock by preventing the aggregation of
stress-denatured proteins; may act as a thermosensor"
/codon_start=1
/transl_table=11
/product="heat shock protein GrpE"
/protein_id="YP_001569334.1"
/db_xref="GI:161502222"
/db_xref="InterPro:IPR000740"
/db_xref="InterPro:IPR009012"
/db_xref="InterPro:IPR013805"
/db_xref="GeneID:5763491"
/translation="MTRMSHNADTLEMIIHFSEVLVAKIDDNVSASLETLNLIPIISE
VSEMNAKKNAEKFMSSKEQKTPEGQAPEEIIMDQHEEVEAVEPNDSAEQVDPRDEKIA
NLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDIEKAHKFALEKFVNELLPVIDSLD
RALEVADKANPDMAAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVE
SEEIPAGNVLGIMQKGYTLNGRTIRAAMVTVAKAKG"
misc_feature 238752..239339
/locus_tag="SARI_00246"
/note="Molecular chaperone GrpE (heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: GrpE; COG0576"
/db_xref="CDD:223649"
misc_feature 238923..239327
/locus_tag="SARI_00246"
/note="GrpE is the adenine nucleotide exchange factor of
DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the
ATPase domain of Hsp70 catalyzing the dissociation of ADP,
which enables rebinding of ATP, one step in the Hsp70
reaction cycle in protein folding; Region: GrpE; cd00446"
/db_xref="CDD:238252"
misc_feature order(238923..238925,238932..238937,238944..238946,
238956..238958,238965..238970,239010..239012,
239022..239024,239031..239033,239052..239054,
239064..239066,239118..239120,239127..239129,
239160..239162)
/locus_tag="SARI_00246"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238252"
misc_feature order(238971..238973,239202..239204,239211..239225,
239271..239273,239298..239300,239310..239312)
/locus_tag="SARI_00246"
/note="hsp70 (ATPase domain) interactions [polypeptide
binding]; other site"
/db_xref="CDD:238252"
unsure 239206..239342
/locus_tag="SARI_00246"
/note="Sequence derived from one plasmid subclone"
gene complement(239406..240647)
/locus_tag="SARI_00247"
/db_xref="GeneID:5763492"
CDS complement(239406..240647)
/locus_tag="SARI_00247"
/inference="protein motif:HMMPfam:IPR000644"
/inference="protein motif:HMMPfam:IPR002550"
/inference="protein motif:HMMPfam:IPR005170"
/inference="similar to AA sequence:INSD:AAL21568.1"
/note="'KEGG: ece:Z3906m 3.8e-203 yfjD; uncharacterized
CBS domain-containing protein K00638;
COG: COG4536 Putative Mg2+ and Co2+ transporter CorB;
Psort location: endoplasmic reticulum, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569335.1"
/db_xref="GI:161502223"
/db_xref="InterPro:IPR000644"
/db_xref="InterPro:IPR002550"
/db_xref="InterPro:IPR005170"
/db_xref="GeneID:5763492"
/translation="MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKP
DRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIA
ALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIKADIVVSGSLSKEELR
TIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHS
PHGRIVLYRDSLDDAISMLRVREAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQ
LIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSV
IIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQ
ENMIKQVKVVPVKPLRESVAE"
misc_feature complement(239409..240647)
/locus_tag="SARI_00247"
/note="hypothetical protein; Provisional; Region:
PRK11573"
/db_xref="CDD:236933"
misc_feature complement(240141..240647)
/locus_tag="SARI_00247"
/note="Domain of unknown function DUF21; Region: DUF21;
pfam01595"
/db_xref="CDD:216595"
misc_feature complement(239721..240059)
/locus_tag="SARI_00247"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains associated
with the CorC_HlyC domain. CorC_HlyC is a transporter
associated domain. This small domain is found in Na+/H+
antiporters, in proteins involved in...; Region:
CBS_pair_CorC_HlyC_assoc; cd04590"
/db_xref="CDD:239963"
misc_feature complement(239436..239669)
/locus_tag="SARI_00247"
/note="Transporter associated domain; Region: CorC_HlyC;
smart01091"
/db_xref="CDD:215020"
gene complement(240712..241503)
/locus_tag="SARI_00248"
/db_xref="GeneID:5763493"
CDS complement(240712..241503)
/locus_tag="SARI_00248"
/inference="protein motif:HMMPfam:IPR002541"
/inference="similar to AA sequence:INSD:AAO70204.1"
/note="'KEGG: sat:SYN_00150 3.3e-05 heme export protein
apocytochrome heme-lyase;
COG: COG4137 ABC-type uncharacterized transport system,
permease component;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569336.1"
/db_xref="GI:161502224"
/db_xref="InterPro:IPR002541"
/db_xref="GeneID:5763493"
/translation="MPVFALLALVAYSFSLALIVPGLLQKNSGWRRMAILSAVIALVC
HAVALESRILPGGDSGQNLSLLNVGSLVSLMICTVMTVVASRNRGWLLLPIVYAFALI
NLAFATFMPNEYITHLEATPGMMVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKL
AFSNEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSIENIDKAVLSIVAWF
VYIVLLWGHYHEGWRGRRVVWFNVAGAGLLTLAYFGSRILQQFVS"
misc_feature complement(240715..241503)
/locus_tag="SARI_00248"
/note="ABC-type uncharacterized transport system, permease
component [General function prediction only]; Region:
COG4137"
/db_xref="CDD:226621"
gene 241669..243030
/locus_tag="SARI_00249"
/db_xref="GeneID:5763494"
CDS 241669..243030
/locus_tag="SARI_00249"
/inference="protein motif:BlastProDom:IPR000897"
/inference="protein motif:Gene3D:IPR004125"
/inference="protein motif:Gene3D:IPR013822"
/inference="protein motif:HMMPfam:IPR000897"
/inference="protein motif:HMMPfam:IPR004125"
/inference="protein motif:HMMPfam:IPR013822"
/inference="protein motif:HMMSmart:IPR003593"
/inference="protein motif:HMMTigr:IPR004780"
/inference="protein motif:ScanRegExp:IPR000897"
/inference="protein motif:superfamily:IPR013822"
/inference="similar to AA sequence:INSD:CAD05856.1"
/note="with 4.5S RNA forms a signal recognition particle
involved in targeting and integration of inner membrane
proteins"
/codon_start=1
/transl_table=11
/product="signal recognition particle protein"
/protein_id="YP_001569337.1"
/db_xref="GI:161502225"
/db_xref="InterPro:IPR000897"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR004125"
/db_xref="InterPro:IPR004780"
/db_xref="InterPro:IPR013822"
/db_xref="GeneID:5763494"
/translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVA
LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQPPAV
VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
SSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
EKTDALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDF
LEQLKQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTLKERAKPE
IIKGSRKRRIAQGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
PGR"
misc_feature 241669..242943
/locus_tag="SARI_00249"
/note="signal recognition particle protein; Provisional;
Region: PRK10867"
/db_xref="CDD:236780"
misc_feature 241693..241926
/locus_tag="SARI_00249"
/note="SRP54-type protein, helical bundle domain; Region:
SRP54_N; smart00963"
/db_xref="CDD:214941"
misc_feature 241969..242490
/locus_tag="SARI_00249"
/note="The signal recognition particle (SRP) mediates the
transport to or across the plasma membrane in bacteria and
the endoplasmic reticulum in eukaryotes. SRP recognizes
N-terminal sighnal sequences of newly synthesized
polypeptides at the ribosome. The...; Region: SRP;
cd03115"
/db_xref="CDD:239389"
misc_feature 241987..242010
/locus_tag="SARI_00249"
/note="P loop; other site"
/db_xref="CDD:239389"
misc_feature order(242080..242082,242245..242247,242410..242412,
242419..242424)
/locus_tag="SARI_00249"
/note="GTP binding site [chemical binding]; other site"
/db_xref="CDD:239389"
misc_feature 242653..242943
/locus_tag="SARI_00249"
/note="Signal peptide binding domain; Region: SRP_SPB;
pfam02978"
/db_xref="CDD:202493"
gene 243246..243530
/gene="rpsP"
/locus_tag="SARI_00250"
/db_xref="GeneID:5763495"
CDS 243246..243530
/gene="rpsP"
/locus_tag="SARI_00250"
/inference="protein motif:BlastProDom:IPR000307"
/inference="protein motif:Gene3D:IPR000307"
/inference="protein motif:HMMPanther:IPR000307"
/inference="protein motif:HMMPfam:IPR000307"
/inference="protein motif:HMMTigr:IPR000307"
/inference="protein motif:ScanRegExp:IPR000307"
/inference="protein motif:superfamily:IPR000307"
/inference="similar to AA sequence:REFSEQ:YP_217664.1"
/note="binds to lower part of 30S body where it stabilizes
two domains; required for efficient assembly of 30S; in
Escherichia coli this protein has nuclease activity"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S16"
/protein_id="YP_001569338.1"
/db_xref="GI:161502226"
/db_xref="InterPro:IPR000307"
/db_xref="GeneID:5763495"
/translation="MGPGVLFTQEDVMVTIRLARHGAKKRPFYQVVVTDSRNARNGRF
IERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVKKAA"
misc_feature 243282..243506
/gene="rpsP"
/locus_tag="SARI_00250"
/note="30S ribosomal protein S16; Reviewed; Region: rpsP;
PRK00040"
/db_xref="CDD:234588"
gene 243546..244097
/gene="rimM"
/locus_tag="SARI_00251"
/db_xref="GeneID:5763496"
CDS 243546..244097
/gene="rimM"
/locus_tag="SARI_00251"
/inference="protein motif:HMMPfam:IPR002676"
/inference="protein motif:HMMPfam:IPR007903"
/inference="protein motif:HMMTigr:IPR011961"
/inference="protein motif:superfamily:IPR011033"
/inference="similar to AA sequence:INSD:AAO70201.1"
/note="Essential for efficient processing of 16S rRNA"
/codon_start=1
/transl_table=11
/product="16S rRNA-processing protein RimM"
/protein_id="YP_001569339.1"
/db_xref="GI:161502227"
/db_xref="InterPro:IPR002676"
/db_xref="InterPro:IPR007903"
/db_xref="InterPro:IPR011033"
/db_xref="InterPro:IPR011961"
/db_xref="GeneID:5763496"
/translation="MMGKQLTAQVPAEPVVLGKMGSSYGIRGWLRVFSSTEDAESIFD
YQPWFIQKADQWQQVQLESWKHHNQDLIIKLKGVDDRDAANLLTNCEIVVDSSQLPAL
EEGDYYWKDLMGCQVVTAEGYDLGKVIDMMETGSNDVLVIKANLKDAFGIKERLVPFL
DGQVIKKVDLATRTIEVDWDPGF"
misc_feature 243576..244094
/gene="rimM"
/locus_tag="SARI_00251"
/note="16S rRNA-processing protein RimM; Provisional;
Region: rimM; PRK00122"
/db_xref="CDD:234650"
misc_feature 243591..243839
/gene="rimM"
/locus_tag="SARI_00251"
/note="RimM N-terminal domain; Region: RimM; pfam01782"
/db_xref="CDD:216696"
misc_feature 243855..244079
/gene="rimM"
/locus_tag="SARI_00251"
/note="PRC-barrel domain; Region: PRC; pfam05239"
/db_xref="CDD:218519"
gene 244175..244957
/locus_tag="SARI_00252"
/db_xref="GeneID:5763497"
CDS 244175..244957
/locus_tag="SARI_00252"
/inference="protein motif:BlastProDom:IPR002649"
/inference="protein motif:HMMPfam:IPR002649"
/inference="protein motif:HMMTigr:IPR002649"
/inference="similar to AA sequence:INSD:AAL21563.1"
/note="'KEGG: stm:STM2674 6.1e-125 trmD; tRNA
(guanine-7-)-methyltransferase K00554;
COG: COG0336 tRNA-(guanine-N1)-methyltransferase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569340.1"
/db_xref="GI:161502228"
/db_xref="InterPro:IPR002649"
/db_xref="GeneID:5763497"
/translation="MFRAITDYGVTGRAVKKGLLNVQSWSPRDFAYDRHRTVDDRPYG
GGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCG
RYEGVDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVARFIPGVLGHEASAIEDSF
ADGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLAL
TEEQARLLAEFKMEHAQQQQIHESIQDASRRLTLRQHERRSV"
misc_feature 244175..244873
/locus_tag="SARI_00252"
/note="tRNA (guanine-N(1)-)-methyltransferase; Reviewed;
Region: trmD; PRK00026"
/db_xref="CDD:234581"
gene 245017..245364
/gene="rplS"
/locus_tag="SARI_00253"
/db_xref="GeneID:5763498"
CDS 245017..245364
/gene="rplS"
/locus_tag="SARI_00253"
/inference="protein motif:BlastProDom:IPR001857"
/inference="protein motif:HMMPfam:IPR001857"
/inference="protein motif:HMMTigr:IPR001857"
/inference="protein motif:ScanRegExp:IPR001857"
/inference="similar to AA sequence:INSD:AAX66580.1"
/note="this protein is located at the 30S-50S ribosomal
subunit interface and may play a role in the structure and
function of the aminoacyl-tRNA binding site"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L19"
/protein_id="YP_001569341.1"
/db_xref="GI:161502229"
/db_xref="InterPro:IPR001857"
/db_xref="GeneID:5763498"
/translation="MSNIIKQLEQEQMKQNVPSFRPGDTVEVKVWVVEGTKKRLQAFE
GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSIAVKRRGAVRKAKLYYLRE
RTGKAARIKERLN"
misc_feature 245020..245361
/gene="rplS"
/locus_tag="SARI_00253"
/note="50S ribosomal protein L19; Provisional; Region:
rplS; PRK05338"
/db_xref="CDD:235418"
gene complement(245534..246609)
/locus_tag="SARI_00254"
/note="Pseudogene compared to gi|16765987|ref|NP_461602.1|
putative diguanylate cyclase/phosphodiesterase [Salmonella
typhimurium LT2]"
/pseudogene="unknown"
/db_xref="GeneID:5763499"
gene complement(246569..246751)
/locus_tag="SARI_00255"
/db_xref="GeneID:5763500"
CDS complement(246569..246751)
/locus_tag="SARI_00255"
/inference="similar to AA sequence:INSD:AAV78400.1"
/note="'COG: COG2199 FOG: GGDEF domain;
Psort location: nuclear, score: 23;
ORF located using Blastx'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569342.1"
/db_xref="GI:161502230"
/db_xref="GeneID:5763500"
/translation="MNKEFSLSRPTFKRTLRRISIISVLITMTLIWLLICVASVLTLK
QYAQKKSRLNRRHDSP"
misc_feature complement(<246605..246751)
/locus_tag="SARI_00255"
/note="putative inner membrane diguanylate cyclase;
Provisional; Region: PRK09966"
/db_xref="CDD:182171"
gene complement(246744..247268)
/locus_tag="SARI_00256"
/db_xref="GeneID:5763501"
CDS complement(246744..247268)
/locus_tag="SARI_00256"
/inference="similar to AA sequence:INSD:AAX66579.1"
/note="'COG: NOG17158 non supervised orthologous group;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569343.1"
/db_xref="GI:161502231"
/db_xref="GeneID:5763501"
/translation="MLMRFSHRFILLFSLLLASLPLYTQRATEEEKSVRAIVSGIISY
IPWPTLSGPPGLCIFSSSHVARVFSEEAGGDFPYQPLIIRTTQEALSARCDGFYFGNE
SPSYQVELTRHYPVNALLLIAEQNTECIIGRVFCLIINNNEVNFSVNPDSLSHSGMRV
NPEVLMLARNQKHE"
misc_feature complement(246759..247184)
/locus_tag="SARI_00256"
/note="Domain of unknown function (DUF4154); Region:
DUF4154; pfam13689"
/db_xref="CDD:205865"
gene 247703..248773
/locus_tag="SARI_00257"
/db_xref="GeneID:5763502"
CDS 247703..248773
/locus_tag="SARI_00257"
/inference="protein motif:Gene3D:IPR006218"
/inference="protein motif:HMMPfam:IPR006218"
/inference="protein motif:HMMPIR:IPR006219"
/inference="protein motif:HMMTigr:IPR006219"
/inference="similar to AA sequence:REFSEQ:NP_755004.1"
/note="'catalyzes the formation of
3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from
phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine
sensitive'"
/codon_start=1
/transl_table=11
/product="phospho-2-dehydro-3-deoxyheptonate aldolase"
/protein_id="YP_001569344.2"
/db_xref="GI:228879507"
/db_xref="InterPro:IPR006218"
/db_xref="InterPro:IPR006219"
/db_xref="GeneID:5763502"
/translation="MQKDALNNVRITDEQVLMTPEQLKAAFPLSLAQEAQIAQSRRTI
SDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
VGWKGLINDPHMDGSFDVEAGLKIARQLLVELVNMGLPLATEALDPNSPQYLGDLFSW
SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQSHRFVGINQAGQ
VALLQTQGNPHGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEIKYGVSVTDACISWE
MTDALLREIHKDLSGQLAVRVA"
misc_feature 247703..248758
/locus_tag="SARI_00257"
/note="phospho-2-dehydro-3-deoxyheptonate aldolase;
Provisional; Region: PRK12755"
/db_xref="CDD:237190"
misc_feature 247835..248725
/locus_tag="SARI_00257"
/note="DAHP synthetase I family; Region: DAHP_synth_1;
pfam00793"
/db_xref="CDD:216123"
gene 248783..249904
/gene="tyrA"
/locus_tag="SARI_00258"
/db_xref="GeneID:5763503"
CDS 248783..249904
/gene="tyrA"
/locus_tag="SARI_00258"
/inference="protein motif:HMMPfam:IPR002701"
/inference="protein motif:HMMPfam:IPR003099"
/inference="protein motif:HMMPIR:IPR008244"
/inference="protein motif:HMMTigr:IPR011277"
/inference="protein motif:superfamily:IPR002701"
/inference="similar to AA sequence:INSD:CAD05848.1"
/note="catalyzes the formation of prephenate from
chorismate and the formation of 4-hydroxyphenylpyruvate
from prephenate in tyrosine biosynthesis"
/codon_start=1
/transl_table=11
/product="bifunctional chorismate mutase/prephenate
dehydrogenase"
/protein_id="YP_001569345.1"
/db_xref="GI:161502233"
/db_xref="InterPro:IPR002701"
/db_xref="InterPro:IPR003099"
/db_xref="InterPro:IPR008244"
/db_xref="InterPro:IPR011277"
/db_xref="GeneID:5763503"
/translation="MVAELTALRDQIDDVDKALLNLLAKRLELVAEVGEVKSRFGLPI
YVPEREASMLASRRAEAEAIGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV
IVGGGGQMGRLFEKMLTLSGYQVRILEQQDWPRAGGIVADAGMVIVSVPIHVTEQVIA
KLPRLPPDCILVDLASVKSGPLQAMLAVHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
QPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSKRNLALIKRYYKRFGDAIALLEQG
DKQAFIDSFRKVEHWFGDYARRFHNESRVLLRQANDSRQ"
misc_feature 248783..249901
/gene="tyrA"
/locus_tag="SARI_00258"
/note="bifunctional chorismate mutase/prephenate
dehydrogenase; Provisional; Region: tyrA; PRK11199"
/db_xref="CDD:183035"
misc_feature 248795..249043
/gene="tyrA"
/locus_tag="SARI_00258"
/note="Chorismate mutase type II; Region: CM_2; cl00693"
/db_xref="CDD:242033"
misc_feature 249200..249787
/gene="tyrA"
/locus_tag="SARI_00258"
/note="prephenate dehydrogenase; Validated; Region:
PRK08507"
/db_xref="CDD:181452"
gene 249962..250870
/locus_tag="SARI_00259"
/db_xref="GeneID:5763504"
CDS 249962..250870
/locus_tag="SARI_00259"
/inference="protein motif:HMMPfam:IPR013658"
/inference="similar to AA sequence:REFSEQ:YP_217657.1"
/note="'KEGG: bme:BMEI1997 2.0e-23 gluconolactonase
K01053;
COG: COG3386 Gluconolactonase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569346.1"
/db_xref="GI:161502234"
/db_xref="InterPro:IPR013658"
/db_xref="GeneID:5763504"
/translation="MTTPHVLFDYVGHLPECPTWSEDEGALYWTDILEKEIHRYHPAS
GAHSVLAFPEKVGCFALREQGGFIVAMRNAIWLADKNGLLQCKVCDNPSNPKLARFND
GGTDGDGRFYAGTFWAPGDYNGAMLMRIDHDLTAKVIQCDIQGHNGLAFSPDNQWMYT
SDTPNGVIYRTSLDKHGEPGKREPFRHFGEGEGLPDGAAMDSEGCYWSAMFDGWRVAR
FSPQGEQLEEYRLPVRCPTMVCFGGADMKTLFITTTRENMSAQEVTDYPLSGAIFTLQ
VTVAGMKKSRFIERQAGSTGTTFSLG"
misc_feature 250001..250726
/locus_tag="SARI_00259"
/note="SMP-30/Gluconolaconase/LRE-like region; Region:
SGL; pfam08450"
/db_xref="CDD:219847"
gene complement(250831..251991)
/gene="pheA"
/locus_tag="SARI_00260"
/db_xref="GeneID:5763505"
CDS complement(250831..251991)
/gene="pheA"
/locus_tag="SARI_00260"
/inference="protein motif:HMMPfam:IPR001086"
/inference="protein motif:HMMPfam:IPR002701"
/inference="protein motif:HMMPIR:IPR008242"
/inference="protein motif:HMMTigr:IPR010952"
/inference="protein motif:ScanRegExp:IPR001086"
/inference="protein motif:superfamily:IPR002701"
/inference="similar to AA sequence:INSD:AAX66575.1"
/note="catalyzing the formation of prephenate from
chorismate and the formation of phenylpyruvate from
prephenate in phenylalanine biosynthesis"
/codon_start=1
/transl_table=11
/product="bifunctional chorismate mutase/prephenate
dehydratase"
/protein_id="YP_001569347.1"
/db_xref="GI:161502235"
/db_xref="InterPro:IPR001086"
/db_xref="InterPro:IPR002701"
/db_xref="InterPro:IPR008242"
/db_xref="InterPro:IPR010952"
/db_xref="GeneID:5763505"
/translation="MTSENPLLALRDKISALDEELLVLLAKRRALAIEVGQAKLLSHR
PVRDIDRERALLDRLIHLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNNTHPH
SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFHQVETGQADYAVVPIEN
TSSGAINDVYDLLQHTSLSIVGEMTVTIDHCILVSGATDLNTIETVYSHPQPFQQCSK
FLSRYPHWKIDYTESTSAAMEKVAQANSPRVAALGSEAGGTLHGLQVLERIAANQTQN
ITRFLVLARKAINVSDQVPAKTTLLIATGQQAGALVEALLVLRNHNLIMTKLESRPIH
GNPWEEMFYLDIQANLESQVMQNSLKELGEITRSMKVLGCYPSENVVPVEPA"
misc_feature complement(250834..251991)
/gene="pheA"
/locus_tag="SARI_00260"
/note="bifunctional chorismate mutase/prephenate
dehydratase; Provisional; Region: pheA; PRK10622"
/db_xref="CDD:182594"
misc_feature complement(251725..251973)
/gene="pheA"
/locus_tag="SARI_00260"
/note="chorismate mutase domain of proteobacterial
P-protein, clade 1; Region: CM_P_1; TIGR01797"
/db_xref="CDD:130856"
misc_feature complement(251128..251676)
/gene="pheA"
/locus_tag="SARI_00260"
/note="Prephenate dehydratase; Region: PDT; pfam00800"
/db_xref="CDD:216127"
misc_feature complement(250864..251103)
/gene="pheA"
/locus_tag="SARI_00260"
/note="C-terminal ACT domain of the bifunctional
chorismate mutase-prephenate dehydratase (CM-PDT) enzyme
and the prephenate dehydratase (PDT) enzyme; Region:
ACT_CM-PDT; cd04905"
/db_xref="CDD:153177"
misc_feature complement(order(250996..251007,251056..251067))
/gene="pheA"
/locus_tag="SARI_00260"
/note="putative L-Phe binding site [chemical binding];
other site"
/db_xref="CDD:153177"
gene 252714..253367
/locus_tag="SARI_00261"
/db_xref="GeneID:5763506"
CDS 252714..253367
/locus_tag="SARI_00261"
/inference="similar to AA sequence:REFSEQ:NP_288436.1"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569348.1"
/db_xref="GI:161502236"
/db_xref="GeneID:5763506"
/translation="MNIIKNCFSFLNSMLGMSGRSYAVSEGHIASKLGSKIVNVKNGS
AELLTYRSADLSKERVITQEILSRLDIRENFVAVRIQEDKFTDLKNKTIQGHKETVAK
VRDWYNPYQNYLGISMGRVELSSDIAKKECRNAMNVMLMERNDFNNKILNSDNLQKQY
GGNGDKSWVVAPLKELLDKGAKVYPDETCSLRLGQPFIITLPETTKVNVDIYPVNKK"
gene complement(253855..254193)
/locus_tag="SARI_00262"
/db_xref="GeneID:5763507"
CDS complement(253855..254193)
/locus_tag="SARI_00262"
/inference="protein motif:HMMPfam:IPR003489"
/inference="protein motif:HMMTigr:IPR003489"
/inference="similar to AA sequence:INSD:AAX66574.1"
/note="associated with 30S ribosomal subunit; interferes
with translation elongation"
/codon_start=1
/transl_table=11
/product="translation inhibitor protein RaiA"
/protein_id="YP_001569349.2"
/db_xref="GI:448236185"
/db_xref="InterPro:IPR003489"
/db_xref="GeneID:5763507"
/translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
PQGFIADATINTPNGHLVASAKHEDMYTAINELINKLERQLNKVQHKGEARRATASVK
DASFVEAEEE"
misc_feature complement(253921..254184)
/locus_tag="SARI_00262"
/note="RaiA ('ribosome-associated inhibitor A', also known
as Protein Y (PY), YfiA, and SpotY, is a stress-response
protein that binds the ribosomal subunit interface and
arrests translation by interfering with aminoacyl-tRNA
binding to the ribosomal...; Region: RaiA; cd00552"
/db_xref="CDD:238308"
misc_feature complement(order(253921..253923,253933..253938,
253978..253980,253987..253989,253993..253995,
254002..254004,254008..254010,254017..254028,
254035..254037,254062..254064,254074..254076,
254086..254091,254107..254109,254116..254118,
254170..254172,254176..254178,254182..254184))
/locus_tag="SARI_00262"
/note="30S subunit binding site; other site"
/db_xref="CDD:238308"
gene complement(254465..255202)
/locus_tag="SARI_00263"
/db_xref="GeneID:5763508"
CDS complement(254465..255202)
/locus_tag="SARI_00263"
/inference="protein motif:Gene3D:IPR011990"
/inference="similar to AA sequence:REFSEQ:YP_151705.1"
/note="'with YaeT, NlpB and YfgL forms a complex involved
in the proper assembly and/or targeting of OMPs to the
outer membrane; involved in resistance to ampicillin and
tetracycline'"
/codon_start=1
/transl_table=11
/product="outer membrane protein assembly complex subunit
YfiO"
/protein_id="YP_001569350.1"
/db_xref="GI:161502238"
/db_xref="InterPro:IPR011990"
/db_xref="GeneID:5763508"
/translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
DGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTH
PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYT
TDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLM
ENAYRQMQLNAQADKVAKIIAANSKNT"
misc_feature complement(254474..255202)
/locus_tag="SARI_00263"
/note="outer membrane biogenesis protein BamD;
Provisional; Region: PRK10866"
/db_xref="CDD:182792"
misc_feature complement(<255098..255202)
/locus_tag="SARI_00263"
/note="Protein of unknown function (DUF3897); Region:
DUF3897; cl17494"
/db_xref="CDD:248048"
gene 255334..256290
/locus_tag="SARI_00264"
/db_xref="GeneID:5763509"
CDS 255334..256290
/locus_tag="SARI_00264"
/inference="protein motif:BlastProDom:IPR006145"
/inference="protein motif:HMMPfam:IPR002942"
/inference="protein motif:HMMPfam:IPR006145"
/inference="protein motif:HMMSmart:IPR002942"
/inference="protein motif:HMMTigr:IPR006225"
/inference="protein motif:ScanRegExp:IPR006224"
/inference="similar to AA sequence:SwissProt:P65837"
/note="'KEGG: sty:STY2851 3.8e-139 sfhB, rluD; ftsH
suppressor protein SfhB K06180;
COG: COG0564 Pseudouridylate synthases, 23S RNA-specific;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569351.1"
/db_xref="GI:161502239"
/db_xref="InterPro:IPR002942"
/db_xref="InterPro:IPR006145"
/db_xref="InterPro:IPR006224"
/db_xref="InterPro:IPR006225"
/db_xref="GeneID:5763509"
/translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILNQR
VLVNGQLCDKPKEKVLGGERVAIDAEIDEEIRFEAQDIPLDIVYEDDDILVINKPRDL
VVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
SLQLREITREYEAVAIGHMTAGGTVNEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHF
RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDQVYGGRPRPPKAHRKRLFPRCVSSTA
SASCNDAASLPSCIGYRNGVARADSTGYGGPYRCDARRFRRT"
misc_feature 255349..256137
/locus_tag="SARI_00264"
/note="Pseudouridylate synthases, 23S RNA-specific
[Translation, ribosomal structure and biogenesis]; Region:
RluA; COG0564"
/db_xref="CDD:223638"
misc_feature 255385..255624
/locus_tag="SARI_00264"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:238095"
misc_feature order(255388..255390,255424..255429,255433..255438,
255442..255447,255454..255459,255463..255465,
255484..255507,255511..255513)
/locus_tag="SARI_00264"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:238095"
misc_feature 255610..256137
/locus_tag="SARI_00264"
/note="Pseudouridine synthase, RsuA/RluD family; Region:
PseudoU_synth_RluCD_like; cd02869"
/db_xref="CDD:211346"
misc_feature order(255739..255750,256042..256044)
/locus_tag="SARI_00264"
/note="active site"
/db_xref="CDD:211346"
gene 256309..257040
/locus_tag="SARI_00265"
/db_xref="GeneID:5763510"
CDS 256309..257040
/locus_tag="SARI_00265"
/inference="protein motif:HMMPfam:IPR003730"
/inference="protein motif:HMMTigr:IPR003730"
/inference="protein motif:superfamily:IPR009030"
/inference="similar to AA sequence:REFSEQ:YP_151703.1"
/note="'COG: COG1496 Uncharacterized conserved protein;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569352.1"
/db_xref="GI:161502240"
/db_xref="InterPro:IPR003730"
/db_xref="InterPro:IPR009030"
/db_xref="GeneID:5763510"
/translation="MNVLIVPQWPLPKGVAACSSTRIGGMSLPPYDSLNLGAHCGDNP
AHVEENRKRLFAEGNLPSKPVWLEQVHGKNVLRLTGEPYASKRADASYSNTPGTVCAV
MTADCLPVLFCNREGTEVAAAHAGWRGLCEGVLEETVACFADKPENIIAWLGPAIGPA
AFEVGPEVRDAFLVKDAQADSAFLAHGEKFLANIYQLARQRLANTGVAHVYGGDRCTF
SESETFFSYRRDKTTGRMASFIWLI"
misc_feature 256309..257037
/locus_tag="SARI_00265"
/note="hypothetical protein; Provisional; Region:
PRK10723"
/db_xref="CDD:182677"
misc_feature 256318..257037
/locus_tag="SARI_00265"
/note="Multicopper polyphenol oxidase (laccase) [Secondary
metabolites biosynthesis, transport and catabolism];
Region: yfiH; COG1496"
/db_xref="CDD:224413"
gene 257158..259743
/locus_tag="SARI_00266"
/db_xref="GeneID:5763511"
CDS 257158..259743
/locus_tag="SARI_00266"
/inference="protein motif:HMMPfam:IPR003959"
/inference="protein motif:HMMPfam:IPR004176"
/inference="protein motif:HMMPfam:IPR013093"
/inference="protein motif:HMMSmart:IPR003593"
/inference="protein motif:ScanRegExp:IPR001270"
/note="'KEGG: eci:UTI89_C2925 0. clpB; heat shock protein
K03695;
COG: COG0542 ATPases with chaperone activity, ATP-binding
subunit;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="protein disaggregation chaperone"
/protein_id="YP_001569353.1"
/db_xref="GI:161502241"
/db_xref="InterPro:IPR001270"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR003959"
/db_xref="InterPro:IPR004176"
/db_xref="InterPro:IPR013093"
/db_xref="GeneID:5763511"
/translation="MGGVMRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN
QEGGSVRPLLTSAGINAGQLRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLA
QKRGDNFISSELFVLAALESRGTLTDLLKSAGATTANITQAIEQMRGGESVNDQGAED
QRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA
IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN
VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE
RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPD
KAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE
ELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG
KIPELEKQLEAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRM
EQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAN
FMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE
VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGR
MKEMVLGVVGHNFRPEFINRIDEVVVFHPLGEQHIAAIAQIQLQRLYKRLEERGYEIH
ISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEASDDR
IVAVQ"
misc_feature 257170..259740
/locus_tag="SARI_00266"
/note="protein disaggregation chaperone; Provisional;
Region: PRK10865"
/db_xref="CDD:182791"
misc_feature 257239..257376
/locus_tag="SARI_00266"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:217254"
misc_feature 257449..257604
/locus_tag="SARI_00266"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:217254"
misc_feature 257710..258192
/locus_tag="SARI_00266"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 257785..257808
/locus_tag="SARI_00266"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(257788..257811,258001..258003,258112..258114)
/locus_tag="SARI_00266"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 257989..258006
/locus_tag="SARI_00266"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 258163..258165
/locus_tag="SARI_00266"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 258880..259464
/locus_tag="SARI_00266"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 258982..259005
/locus_tag="SARI_00266"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(258985..259008,259198..259200,259324..259326)
/locus_tag="SARI_00266"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 259186..259203
/locus_tag="SARI_00266"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 259435..259437
/locus_tag="SARI_00266"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 259504..259707
/locus_tag="SARI_00266"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; pfam10431"
/db_xref="CDD:204486"
unsure 257356..257399
/locus_tag="SARI_00266"
/note="Sequence derived from one plasmid subclone"
unsure 259165..259622
/locus_tag="SARI_00266"
/note="Sequence derived from one plasmid subclone"
gene 260199..261745
/locus_tag="SARI_00267"
/db_xref="GeneID:5763512"
rRNA 260199..261745
/locus_tag="SARI_00267"
/product="16S ribosomal RNA"
/inference="nucleotide motif:Rfam:RF00177"
/note="Rfam score 351.93;
5 domain"
/db_xref="GeneID:5763512"
unsure 260591..260610
/locus_tag="SARI_00267"
/note="Sequence derived from one plasmid subclone"
gene 261826..261898
/locus_tag="SARI_00268"
/db_xref="GeneID:5763513"
tRNA 261826..261898
/locus_tag="SARI_00268"
/product="tRNA-Glu"
/db_xref="GeneID:5763513"
gene 262085..265191
/locus_tag="SARI_04703"
/db_xref="GeneID:9486964"
rRNA 262085..265191
/locus_tag="SARI_04703"
/product="23S ribosomal RNA"
/db_xref="GeneID:9486964"
gene 265377..265492
/locus_tag="SARI_00269"
/db_xref="GeneID:5763514"
rRNA 265377..265492
/locus_tag="SARI_00269"
/product="5S ribosomal RNA"
/inference="nucleotide motif:Rfam:RF00001"
/note="Rfam score 84.4"
/db_xref="GeneID:5763514"
gene 265780..266235
/locus_tag="SARI_00270"
/db_xref="GeneID:5763515"
CDS 265780..266235
/locus_tag="SARI_00270"
/inference="protein motif:superfamily:IPR008979"
/inference="similar to AA sequence:INSD:AAV76285.1"
/note="'COG: NOG09993 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569354.1"
/db_xref="GI:161502242"
/db_xref="InterPro:IPR008979"
/db_xref="GeneID:5763515"
/translation="MAIKSFNYQQDFSSIDFRQQPDLYQVGRGEQGVLLVEPYKSEIL
PFWRYKDEASAIKSAEQIYQLFEAYRQQDDFVGMDMARKFIQMGYTRARRYANYKGGR
KYAEDGSLNTRGNDPTKAAAATVFKGWWDKIRQDEDYLKRKRQHQARWG"
misc_feature 265795..266229
/locus_tag="SARI_00270"
/note="Domain of unknown function (DUF4385); Region:
DUF4385; pfam14328"
/db_xref="CDD:222684"
gene 266339..267640
/locus_tag="SARI_00271"
/db_xref="GeneID:5763516"
CDS 266339..267640
/locus_tag="SARI_00271"
/inference="protein motif:HMMPfam:IPR005828"
/inference="protein motif:HMMTigr:IPR004736"
/inference="protein motif:ScanRegExp:IPR005829"
/inference="similar to AA sequence:REFSEQ:YP_149598.1"
/note="'COG: COG0477 Permeases of the major facilitator
superfamily;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="alpha-ketoglutarate transporter"
/protein_id="YP_001569355.1"
/db_xref="GI:161502243"
/db_xref="InterPro:IPR004736"
/db_xref="InterPro:IPR005828"
/db_xref="InterPro:IPR005829"
/db_xref="GeneID:5763516"
/translation="MAEIIQRIDKNNAEAPEIRRRVWAIVGASSGNLVEWFDFYAYSF
CSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADRRGRKASMLISVC
MMCLGSLVIACLPGYDTIGIWAPALLLIARLFQGLSVGGEYGTSATYMSEVALDGLKG
FFASFQYVTLIGGQLLALLVVVLLQQVLEDAELRAWGWRIPFALGAVLAVVALWLRRQ
LDETSKHETRALKEAGSLKGLWRNRKAFLMVLGFTAAGSLCFYTFTTYMQKYLVNTAG
MHANVASGIMTVALCVFMLVQPLFGALSDKIGRRTSMLCFGALATLFTVPILSALQNV
TSPYVAFALVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEY
VALSLKSFGMENSFFWYVTAMAVLAFLVSLMLHRKGKGLRL"
misc_feature 266339..267637
/locus_tag="SARI_00271"
/note="alpha-ketoglutarate transporter; Provisional;
Region: PRK10406"
/db_xref="CDD:182433"
misc_feature 266411..267610
/locus_tag="SARI_00271"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(266453..266455,266462..266470,266474..266479,
266546..266548,266555..266560,266567..266569,
266579..266584,266588..266593,266753..266758,
266765..266770,266777..266782,266789..266791,
266825..266830,266837..266842,266858..266860,
267107..267109,267116..267121,267128..267133,
267140..267142,267182..267184,267194..267196,
267206..267208,267215..267217,267227..267229,
267380..267382,267389..267394,267401..267403,
267413..267418,267425..267427,267458..267463,
267470..267475,267485..267490,267497..267499)
/locus_tag="SARI_00271"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(267637..267960)
/locus_tag="SARI_00272"
/db_xref="GeneID:5763517"
CDS complement(267637..267960)
/locus_tag="SARI_00272"
/inference="similar to AA sequence:REFSEQ:NP_457128.1"
/note="'COG: COG5544 Predicted periplasmic lipoprotein;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569356.2"
/db_xref="GI:448236186"
/db_xref="GeneID:5763517"
/translation="MRILIPFTVLFLSGCSHLANDSWSGQDKAQHFMASAMLSAAGNE
YARHQGVNPDRSAAIGLMFSLSLGASKELWDSRPEGSGWSWKDFAWDVAGATTGYAIW
QMAQH"
misc_feature complement(267646..267960)
/locus_tag="SARI_00272"
/note="lipoprotein; Provisional; Region: PRK10759"
/db_xref="CDD:182705"
gene complement(268005..269360)
/gene="pssA"
/locus_tag="SARI_00273"
/db_xref="GeneID:5763518"
CDS complement(268005..269360)
/gene="pssA"
/locus_tag="SARI_00273"
/inference="protein motif:HMMPfam:IPR001736"
/inference="protein motif:HMMSmart:IPR001736"
/inference="similar to AA sequence:INSD:AAL21546.1"
/note="catalyzes de novo synthesis of phosphatidylserine
from CDP-diacylglycerol and L-serine which leads
eventually to the production of phosphatidylethanolamine;
bounds to the ribosome"
/codon_start=1
/transl_table=11
/product="phosphatidylserine synthase"
/protein_id="YP_001569357.1"
/db_xref="GI:161502245"
/db_xref="InterPro:IPR001736"
/db_xref="GeneID:5763518"
/translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYTPATFRETLLEKI
ASATQRICIVALYLEQDDGGKGILDALYAAKRQRPELDVRVLVDWHRAQRGRIGAAAS
NTNADWYCRLAQENPDIEVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL
HQHDKYRYDRYQLIRNRQMADIMFDWVTRNLMNGRGVNRLDNTLRPKSPEIKNDIRLY
RQELREASYHFQGDANDEQLSVTPLVGLGKSSLLNKTIFHLMPCAEHKLTICTPYFNL
PAVLVRNIIQLLRDGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSR
LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLLTGNNLNPRAWRLDLENAILIHD
PKQELAPQREKELELIRTHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI
L"
misc_feature complement(268068..269360)
/gene="pssA"
/locus_tag="SARI_00273"
/note="phosphatidylserine synthase; Provisional; Region:
pssA; PRK09428"
/db_xref="CDD:236510"
misc_feature complement(268791..269312)
/gene="pssA"
/locus_tag="SARI_00273"
/note="Catalytic domain, repeat 1, of phosphatidylserine
synthases from gram-negative bacteria; Region:
PLDc_PSS_G_neg_1; cd09134"
/db_xref="CDD:197232"
misc_feature complement(order(268791..268793,268803..268805,
268812..268817,268827..268829,268839..268841,
268845..268847,268851..268865,268905..268907,
268911..268913,268941..268961,268971..268985,
269274..269276,269280..269282))
/gene="pssA"
/locus_tag="SARI_00273"
/note="domain interface [polypeptide binding]; other site"
/db_xref="CDD:197232"
misc_feature complement(order(268854..268856,268899..268901,
268905..268907,268941..268943,268947..268949))
/gene="pssA"
/locus_tag="SARI_00273"
/note="putative active site [active]"
/db_xref="CDD:197232"
misc_feature complement(268947..268949)
/gene="pssA"
/locus_tag="SARI_00273"
/note="catalytic site [active]"
/db_xref="CDD:197232"
misc_feature complement(268068..268649)
/gene="pssA"
/locus_tag="SARI_00273"
/note="Catalytic domain, repeat 2, of phosphatidylserine
synthases from gram-negative bacteria; Region:
PLDc_PSS_G_neg_2; cd09136"
/db_xref="CDD:197234"
misc_feature complement(order(268137..268142,268149..268151,
268161..268163,268170..268172,268188..268190,
268194..268217,268227..268229,268245..268256,
268287..268301,268623..268625,268629..268649))
/gene="pssA"
/locus_tag="SARI_00273"
/note="domain interface [polypeptide binding]; other site"
/db_xref="CDD:197234"
misc_feature complement(order(268206..268208,268239..268241,
268245..268247,268284..268286,268290..268292))
/gene="pssA"
/locus_tag="SARI_00273"
/note="putative active site [active]"
/db_xref="CDD:197234"
misc_feature complement(268290..268292)
/gene="pssA"
/locus_tag="SARI_00273"
/note="catalytic site [active]"
/db_xref="CDD:197234"
gene complement(269475..272135)
/locus_tag="SARI_00274"
/db_xref="GeneID:5763519"
CDS complement(269475..272135)
/locus_tag="SARI_00274"
/inference="protein motif:Gene3D:IPR013816"
/inference="protein motif:HMMPfam:IPR000182"
/inference="protein motif:HMMPfam:IPR003781"
/note="'KEGG: eci:UTI89_C2907 0. yfiQ; hypothetical
protein YfiQ K09181;
COG: COG1042 Acyl-CoA synthetase (NDP forming);
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569358.1"
/db_xref="GI:161502246"
/db_xref="InterPro:IPR000182"
/db_xref="InterPro:IPR003781"
/db_xref="InterPro:IPR013816"
/db_xref="GeneID:5763519"
/translation="MSQQGLEALLRPKSIAVIGASMKPHRAGYLMMRNLLAGGFNGPV
LPVTPAWKAVLGVMAWPDIASLPFTPDLAILCTNASRNLALLDALGANGCKTCIILSA
PTSQHEELLACARRHKMRLLGPNSLGLLAPWLGLNASFSPVPIKQGKLAFISQSAAVS
NTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
SAARSASRNKPILVIKSGRSPAAQRLLNTSAGMDPAWDAAIQRAGLLRVQDTHELFSA
VETLSHMRPLRGDRLMIISNGAAPAALALDELWSRNGKLATLSEETCLQLRQALPAHI
DIANPLDLCDDASSEHYVKTLDILLASQDFDALMVIHSPSAAAPGTESAHALIETIKR
HPRGRFVTLLTNWCGEFSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
ETPALPSNLTSNTAEAHNLLQQAIAEGATSLDTHEVQPILHAYGLHTLPTWIAGDSAE
AVHIAEQIGYPVALKLRSPDIPHKSDVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA
RIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEEQAVVALPPLNMN
LARYLVIQGIKQRKIRARSALHPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASA
SEFTALDVTLDIAPFDGDSESRLAVRPYPHQLEEWVEMKNGDRCLFRPILPEDEPQLR
QFIAQVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRLDNTEEILGVTR
AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLIAYTRDHGLRRLNGITMPNNRSMVA
LARKLGFQVDIQLEEGIVGLTLNLAQCDES"
misc_feature complement(270261..272129)
/locus_tag="SARI_00274"
/note="Acyl-CoA synthetase (NDP forming) [Energy
production and conversion]; Region: COG1042"
/db_xref="CDD:223972"
misc_feature complement(271746..272099)
/locus_tag="SARI_00274"
/note="CoA binding domain; Region: CoA_binding_2;
pfam13380"
/db_xref="CDD:222088"
misc_feature complement(271296..271694)
/locus_tag="SARI_00274"
/note="Succinyl-CoA ligase like flavodoxin domain; Region:
Succ_CoA_lig; pfam13607"
/db_xref="CDD:205785"
misc_feature complement(270054..270722)
/locus_tag="SARI_00274"
/note="ATP-grasp domain; Region: ATP-grasp_5; pfam13549"
/db_xref="CDD:222215"
misc_feature complement(269544..269963)
/locus_tag="SARI_00274"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_3; pfam13302"
/db_xref="CDD:222034"
misc_feature complement(269607..269777)
/locus_tag="SARI_00274"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature complement(order(269661..269666,269694..269702))
/locus_tag="SARI_00274"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(272171..272869)
/locus_tag="SARI_00275"
/db_xref="GeneID:5763520"
CDS complement(272171..272869)
/locus_tag="SARI_00275"
/inference="protein motif:HMMPfam:IPR005636"
/inference="similar to AA sequence:REFSEQ:YP_149602.1"
/note="'COG: COG3148 Uncharacterized conserved protein;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569359.2"
/db_xref="GI:448236187"
/db_xref="InterPro:IPR005636"
/db_xref="GeneID:5763520"
/translation="MNKNAVLQLRAERLARATRPFLARGNRVHRCQRCLLPLKLCLCD
TLTPAQAKSRFCLIMFDTEPLKPSNTGRLIADILPDTAAFQWSRTEPPQALLELVQHP
DYQPIVVFPASYAGEAREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDHLPIIS
VDLSRLSAYRLREIHAEGQYCTAEVAIALLDMAGDTEAAVGLGEHFTRFKTRYLAGKT
QHPGNITAENSESV"
misc_feature complement(272174..272860)
/locus_tag="SARI_00275"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG3148"
/db_xref="CDD:225690"
gene complement(272940..273359)
/locus_tag="SARI_00276"
/db_xref="GeneID:5763521"
CDS complement(272940..273359)
/locus_tag="SARI_00276"
/inference="protein motif:FPrintScan:IPR006662"
/inference="protein motif:Gene3D:IPR012335"
/inference="protein motif:HMMPfam:IPR013766"
/inference="protein motif:HMMTigr:IPR005746"
/inference="protein motif:ScanRegExp:IPR006662"
/inference="protein motif:superfamily:IPR012336"
/inference="similar to AA sequence:REFSEQ:NP_461584.1"
/note="'KEGG: stm:STM2649 1.4e-72 trxC; THIoredoxin 2,
redox factor K03672;
COG: COG0526 Thiol-disulfide isomerase and THIoredoxins;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="thioredoxin 2"
/protein_id="YP_001569360.1"
/db_xref="GI:161502248"
/db_xref="InterPro:IPR005746"
/db_xref="InterPro:IPR006662"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="InterPro:IPR013766"
/db_xref="GeneID:5763521"
/translation="MNTVCTHCQAINRIPDDRLQDAAKCGRCGHELFDGEVINATSET
LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFKDVAEERSGKVRFVKVDTEAERELSARF
GIRSIPTIMIFKHGQVVDMLNGAVPKAPFDNWLNEAL"
misc_feature complement(272943..273359)
/locus_tag="SARI_00276"
/note="thioredoxin 2; Provisional; Region: PRK10996"
/db_xref="CDD:182889"
misc_feature complement(273270..273359)
/locus_tag="SARI_00276"
/note="zinc-ribbon domain; Region: zinc_ribbon_5; cl11777"
/db_xref="CDD:209383"
misc_feature complement(272952..273200)
/locus_tag="SARI_00276"
/note="TRX family; composed of two groups: Group I, which
includes proteins that exclusively encode a TRX domain;
and Group II, which are composed of fusion proteins of TRX
and additional domains. Group I TRX is a small ancient
protein that alter the redox...; Region: TRX_family;
cd02947"
/db_xref="CDD:239245"
misc_feature complement(order(273159..273161,273168..273170))
/locus_tag="SARI_00276"
/note="catalytic residues [active]"
/db_xref="CDD:239245"
gene 273563..274600
/locus_tag="SARI_00277"
/db_xref="GeneID:5763522"
CDS 273563..274600
/locus_tag="SARI_00277"
/inference="protein motif:BlastProDom:IPR001537"
/inference="protein motif:HMMPfam:IPR001537"
/inference="protein motif:HMMPfam:IPR013123"
/inference="similar to AA sequence:INSD:CAD05832.1"
/note="'KEGG: stt:t0262 1.1e-182 yfiF; putative RNA
methyltransferase K03214;
COG: COG0566 rRNA methylases;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="putative methyltransferase"
/protein_id="YP_001569361.1"
/db_xref="GI:161502249"
/db_xref="InterPro:IPR001537"
/db_xref="InterPro:IPR013123"
/db_xref="GeneID:5763522"
/translation="MNDELKNKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPTKSRT
DGGRRPARDERNNQSRDRKHETSPWRTVSRAPGDETAEKVDHGGISGKSFIDPEILRR
QRAEETRVYGENACQALFQSRPDAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
ELAKVSGTEHHGGVCFLIKKRNGMTVKQWVKQAADQDCVLALEDIANPHNLGGMMRSC
AHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGESIVDVLDDFRQAGYTVVTTS
SDRGQALFGATLPEKMVLVLGREYDFLPEAAREPDDLCVKINGTGNVESLNVSVATGV
LLAEWWRQNKA"
misc_feature 273563..274597
/locus_tag="SARI_00277"
/note="putative methyltransferase; Provisional; Region:
PRK10864"
/db_xref="CDD:236779"
misc_feature 273890..274102
/locus_tag="SARI_00277"
/note="RNA 2'-O ribose methyltransferase substrate
binding; Region: SpoU_sub_bind; pfam08032"
/db_xref="CDD:203842"
misc_feature 274157..274570
/locus_tag="SARI_00277"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
pfam00588"
/db_xref="CDD:216010"
gene complement(274719..275408)
/locus_tag="SARI_00278"
/db_xref="GeneID:5763523"
CDS complement(274719..275408)
/locus_tag="SARI_00278"
/inference="protein motif:BlastProDom:IPR003249"
/inference="protein motif:HMMPfam:IPR005122"
/inference="protein motif:HMMTigr:IPR002043"
/inference="protein motif:ScanRegExp:IPR002043"
/inference="similar to AA sequence:INSD:AAV76293.1"
/note="Excises uracil residues from the DNA which can
arise as a result of misincorporation of dUMP residues by
DNA polymerase or due to deamination of cytosine"
/codon_start=1
/transl_table=11
/product="uracil-DNA glycosylase"
/protein_id="YP_001569362.1"
/db_xref="GI:161502250"
/db_xref="InterPro:IPR002043"
/db_xref="InterPro:IPR003249"
/db_xref="InterPro:IPR005122"
/db_xref="GeneID:5763523"
/translation="MATELTWHDVLADEKQQPYFINTLHTVAGERQSGITVYPPQKDV
FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAPPPSLVNMYKELEASIPG
FVRPPHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQYREGVV
FLLWGSHAQKKGAIIDPLRHHILKAPHPSPLSAHRGFFGCNHFALTNQWLEQHGEKPI
DWTPVLPAESE"
misc_feature complement(274749..275357)
/locus_tag="SARI_00278"
/note="Family 1 of Uracil-DNA glycosylase (UDG) enzymes;
Region: UDG_F1; cd10027"
/db_xref="CDD:198425"
misc_feature complement(order(274848..274850,275040..275042,
275145..275147,275178..275183,275211..275225))
/locus_tag="SARI_00278"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:198425"
misc_feature complement(order(274833..274844,274848..274853,
274911..274916,275145..275153,275208..275213,
275217..275222))
/locus_tag="SARI_00278"
/note="active site"
/db_xref="CDD:198425"
misc_feature complement(order(274836..274844,274848..274850,
274911..274916,275010..275015,275145..275153,
275205..275213,275220..275222))
/locus_tag="SARI_00278"
/note="UGI interface [polypeptide binding]; other site"
/db_xref="CDD:198425"
misc_feature complement(order(274848..274850,275217..275219))
/locus_tag="SARI_00278"
/note="catalytic site [active]"
/db_xref="CDD:198425"
gene 275727..276110
/locus_tag="SARI_00279"
/db_xref="GeneID:5763524"
CDS 275727..276110
/locus_tag="SARI_00279"
/inference="protein motif:HMMPfam:IPR001150"
/inference="protein motif:HMMPIR:IPR011140"
/inference="protein motif:ScanRegExp:IPR001150"
/inference="similar to AA sequence:INSD:AAL21540.1"
/note="stress-induced glycyl radical protein that can
replace an oxidatively damaged pyruvate formate-lyase
subunit"
/codon_start=1
/transl_table=11
/product="autonomous glycyl radical cofactor GrcA"
/protein_id="YP_001569363.1"
/db_xref="GI:161502251"
/db_xref="InterPro:IPR001150"
/db_xref="InterPro:IPR011140"
/db_xref="GeneID:5763524"
/translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKSGFAEDEVV
AVSKLGEIEYREIPMEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
YAVRFNSLTPEQQRDVIARTFTESL"
misc_feature 275727..276107
/locus_tag="SARI_00279"
/note="autonomous glycyl radical cofactor GrcA;
Provisional; Region: PRK11127"
/db_xref="CDD:182983"
gene complement(276224..277558)
/locus_tag="SARI_00280"
/db_xref="GeneID:5763525"
CDS complement(276224..277558)
/locus_tag="SARI_00280"
/inference="protein motif:HMMPfam:IPR001650"
/inference="protein motif:HMMPfam:IPR011545"
/inference="protein motif:HMMSmart:IPR001650"
/inference="protein motif:HMMSmart:IPR014001"
/inference="protein motif:ScanRegExp:IPR000629"
/inference="similar to AA sequence:INSD:AAX66554.1"
/note="facilitates an early step in the assembly of the
50S subunit of the ribosome"
/codon_start=1
/transl_table=11
/product="ATP-dependent RNA helicase SrmB"
/protein_id="YP_001569364.1"
/db_xref="GI:161502252"
/db_xref="InterPro:IPR000629"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="GeneID:5763525"
/translation="MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDV
LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAIQVADHARELAKH
THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
RMLDMGFAQDIEHIAGETRWRKQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRE
RKKIHQWYYRADNFEHKVALLKHLLKQDDATRSIVFVRKRERVHELAETLRLAGINNC
YLEGEMAQIKRNEGIKRLTDGRVNVLVATDVAARGIDIPDVSHVINFDMPRSGDTYLH
RIGRTGRAGRKGTAISLVEAHDHLLLLKIGRYIEEPLKARVIDELRPTTRAPSEKLTG
KPSKKVLAKRAEKKKEKEKEKPRVKKRHRDTKNIGKRRKPSGTKMQEQSSEE"
misc_feature complement(276254..277549)
/locus_tag="SARI_00280"
/note="ATP-dependent RNA helicase SrmB; Provisional;
Region: PRK11192"
/db_xref="CDD:236877"
misc_feature complement(276926..277507)
/locus_tag="SARI_00280"
/note="DEAD-box helicases. A diverse family of proteins
involved in ATP-dependent RNA unwinding, needed in a
variety of cellular processes including splicing, ribosome
biogenesis and RNA degradation. The name derives from the
sequence of the Walker B motif; Region: DEADc; cd00268"
/db_xref="CDD:238167"
misc_feature complement(277394..277408)
/locus_tag="SARI_00280"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238167"
misc_feature complement(277079..277090)
/locus_tag="SARI_00280"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:238167"
misc_feature complement(276989..276997)
/locus_tag="SARI_00280"
/note="motif III; other site"
/db_xref="CDD:238167"
misc_feature complement(276557..276898)
/locus_tag="SARI_00280"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:238034"
misc_feature complement(order(276638..276646,276719..276724,
276782..276793))
/locus_tag="SARI_00280"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:238034"
misc_feature complement(order(276557..276559,276620..276622))
/locus_tag="SARI_00280"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:238034"
gene 277688..278425
/locus_tag="SARI_00281"
/db_xref="GeneID:5763526"
CDS 277688..278425
/locus_tag="SARI_00281"
/inference="protein motif:HMMPfam:IPR007848"
/inference="protein motif:ScanRegExp:IPR002052"
/inference="similar to AA sequence:INSD:AAL21536.1"
/note="'KEGG: eci:UTI89_C2897 1.3e-97 yfiC; hypothetical
protein YfiC K00599;
COG: COG4123 Predicted O-methyltransferase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="tRNA (adenine-N(6)-)-methyltransferase"
/protein_id="YP_001569365.2"
/db_xref="GI:448236188"
/db_xref="InterPro:IPR002052"
/db_xref="InterPro:IPR007848"
/db_xref="GeneID:5763526"
/translation="MSHSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAD
VKRILDIGTGSGLLALMLAQRTDDNVPVDAVELDAEAAMQAQENVAHSPWAHRITVHT
DDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARYTATLDHQTLLAIAADCIT
EDGFLCVVLPEQIGNAFTQQALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS
DRLVIRGPDQHYSESYTALTQAFYLFM"
misc_feature 277688..278422
/locus_tag="SARI_00281"
/note="Predicted O-methyltransferase [General function
prediction only]; Region: COG4123"
/db_xref="CDD:226608"
misc_feature 277826..>278062
/locus_tag="SARI_00281"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(277838..277858,277913..277918,277994..278002,
278051..278053)
/locus_tag="SARI_00281"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(278410..280032)
/locus_tag="SARI_00282"
/db_xref="GeneID:5763527"
CDS complement(278410..280032)
/locus_tag="SARI_00282"
/inference="protein motif:FPrintScan:IPR001100"
/inference="protein motif:FPrintScan:IPR013027"
/inference="protein motif:HMMPfam:IPR003953"
/inference="protein motif:HMMPfam:IPR004112"
/inference="protein motif:HMMTigr:IPR005288"
/inference="protein motif:superfamily:IPR004112"
/inference="similar to AA sequence:INSD:CAD02790.1"
/note="catalyzes the formation of oxaloacetate from
L-aspartate"
/codon_start=1
/transl_table=11
/product="L-aspartate oxidase"
/protein_id="YP_001569366.1"
/db_xref="GI:161502254"
/db_xref="InterPro:IPR001100"
/db_xref="InterPro:IPR003953"
/db_xref="InterPro:IPR004112"
/db_xref="InterPro:IPR005288"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:5763527"
/translation="MMITPELSCDVLIIGSGAAGLSLALRLAEKHKVIVLSKGPVSEG
STFYAQGGIAAVFDETDSIESHVEDTLIAGAGICDRHAVEFVASNARACVQWLIDQGV
LFDTHIQPNGEESYHLTREGGHSHRRILHAADATGKEVETTLVSRALKHPNIRVLERS
NAVDLIISDKIGLPGPRRVVGAWIWNRNKEWVETCHAKSVVLATGGASKVYQYTTNPD
ISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGSR
FMPDVDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPDDFVRQHFPMIYAKLLD
LGMDLTKEPIPVVPAAHYTCGGVVVDDYGRTDVDGLYAIGEVSYTGLHGANRMASNSL
LECLVYGWSAAKDIDRRMPYAHGVDVLPAWDESRVENADEQVVIQHNWHELRLLMWDY
VGIVRTTKRLERALRRITMLQQEIDEYYANFRVSNNLLELRNLAQVAELIVRCAIMRK
ESRGLHFTLDYPQQLAESGPSILSPLTSHINR"
misc_feature complement(278428..280032)
/locus_tag="SARI_00282"
/note="L-aspartate oxidase; Provisional; Region: PRK09077"
/db_xref="CDD:236374"
misc_feature complement(278812..279939)
/locus_tag="SARI_00282"
/note="L-aspartate oxidase; Provisional; Region: PRK06175"
/db_xref="CDD:180442"
misc_feature complement(<278470..278715)
/locus_tag="SARI_00282"
/note="Fumarate reductase flavoprotein C-term; Region:
Succ_DH_flav_C; pfam02910"
/db_xref="CDD:217281"
gene 280457..281032
/locus_tag="SARI_00283"
/db_xref="GeneID:5763528"
CDS 280457..281032
/locus_tag="SARI_00283"
/inference="protein motif:HMMPfam:IPR007627"
/inference="protein motif:HMMPfam:IPR013249"
/inference="protein motif:ScanRegExp:IPR000838"
/inference="protein motif:superfamily:IPR013324"
/inference="protein motif:superfamily:IPR013325"
/inference="similar to AA sequence:INSD:CAD02789.1"
/note="Member of the extracytoplasmic function sigma
factors which are active under specific conditions; binds
with the catalytic core of RNA polymerase to produce the
holoenzyme and directs bacterial core RNA polymerase to
specific promoter elements to initiate transcription; this
sigma factor is involved in heat shock and oxidative
stress response"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma factor RpoE"
/protein_id="YP_001569367.1"
/db_xref="GI:161502255"
/db_xref="InterPro:IPR000838"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR013324"
/db_xref="InterPro:IPR013325"
/db_xref="GeneID:5763528"
/translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG
DVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNHLVAQGRRPPSSDVDVIE
AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
misc_feature 280457..281023
/locus_tag="SARI_00283"
/note="RNA polymerase sigma factor RpoE; Region:
RpoE_Sigma70; TIGR02939"
/db_xref="CDD:131985"
misc_feature 280529..280732
/locus_tag="SARI_00283"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:218138"
misc_feature 280838..280999
/locus_tag="SARI_00283"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(280871..280873,280901..280903,280919..280924,
280952..280954,280958..280963,280967..280975,
280979..280984,280988..280990)
/locus_tag="SARI_00283"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 281064..281714
/locus_tag="SARI_00284"
/db_xref="GeneID:5763529"
CDS 281064..281714
/locus_tag="SARI_00284"
/inference="protein motif:HMMPfam:IPR005572"
/inference="protein motif:HMMPfam:IPR005573"
/inference="similar to AA sequence:INSD:AAL21533.1"
/note="'COG: COG3073 Negative regulator of sigma E
activity;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="anti-RNA polymerase sigma factor SigE"
/protein_id="YP_001569368.1"
/db_xref="GI:161502256"
/db_xref="InterPro:IPR005572"
/db_xref="InterPro:IPR005573"
/db_xref="GeneID:5763529"
/translation="MQKEKLSALMDGETLDSELLNALTHDPEMQKTWESYHLIRDSMR
GDTPDVLHFDISARVMAAIENDPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLT
QVGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVG
SQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
misc_feature 281064..281711
/locus_tag="SARI_00284"
/note="anti-RNA polymerase sigma factor SigE; Provisional;
Region: PRK10863"
/db_xref="CDD:182789"
misc_feature 281064..281330
/locus_tag="SARI_00284"
/note="Anti sigma-E protein RseA, N-terminal domain;
Region: RseA_N; pfam03872"
/db_xref="CDD:217773"
misc_feature 281454..281621
/locus_tag="SARI_00284"
/note="Anti sigma-E protein RseA, C-terminal domain;
Region: RseA_C; pfam03873"
/db_xref="CDD:217774"
gene 281714..282670
/gene="rseB"
/locus_tag="SARI_00285"
/db_xref="GeneID:5763530"
CDS 281714..282670
/gene="rseB"
/locus_tag="SARI_00285"
/inference="protein motif:HMMPfam:IPR005588"
/inference="similar to AA sequence:INSD:CAD02787.1"
/note="periplasmic protein; interacts with the C-terminal
domain of RseA and stimulates RseA binding to sigmaE via
the cytoplasmic RseA N-terminal domain which then
sequesters sigmaE in the membrane thereby preventing
sigmaE associated with core RNAP"
/codon_start=1
/transl_table=11
/product="periplasmic negative regulator of sigmaE"
/protein_id="YP_001569369.1"
/db_xref="GI:161502257"
/db_xref="InterPro:IPR005588"
/db_xref="GeneID:5763530"
/translation="MKQLWFAMSLVAGSLFFSVNASADPASGALLQQMNIASQSLNYE
LSFVSITKQGVESLRYRHARLDSRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTL
NGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
DMDTKLPMRVDLLDRDGETLEQFRVIAFTVSKDIGSTMQALAKANLPPLLSVPGGEKT
KFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATPNSSDQM
LRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ"
misc_feature 281714..282667
/gene="rseB"
/locus_tag="SARI_00285"
/note="Negative regulator of sigma E activity [Signal
transduction mechanisms]; Region: RseB; COG3026"
/db_xref="CDD:225570"
misc_feature 281714..282667
/gene="rseB"
/locus_tag="SARI_00285"
/note="anti-sigma E factor; Provisional; Region: rseB;
PRK09455"
/db_xref="CDD:236525"
gene 282667..283146
/locus_tag="SARI_00286"
/db_xref="GeneID:5763531"
CDS 282667..283146
/locus_tag="SARI_00286"
/inference="protein motif:HMMPfam:IPR007359"
/inference="similar to AA sequence:REFSEQ:YP_149615.1"
/note="involved in the reduction of the SoxR iron-sulfur
cluster"
/codon_start=1
/transl_table=11
/product="SoxR reducing system protein RseC"
/protein_id="YP_001569370.1"
/db_xref="GI:161502258"
/db_xref="InterPro:IPR007359"
/db_xref="GeneID:5763531"
/translation="MIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLG
PQTSHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFFCAALFQVLFGS
DLAALSGAVLGGMGGFLVARGYSRKLSERDAWQPVILNVALPPGLVRVETTSIEMRQ"
misc_feature 282667..283128
/locus_tag="SARI_00286"
/note="SoxR reducing system protein RseC; Provisional;
Region: PRK10862"
/db_xref="CDD:182788"
gene 283575..284054
/locus_tag="SARI_00287"
/db_xref="GeneID:5763532"
CDS 283575..284054
/locus_tag="SARI_00287"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569371.1"
/db_xref="GI:161502259"
/db_xref="GeneID:5763532"
/translation="MLSGNTGAPDSTTATTTTAVNYVLNQALAAYSLVASRYTADGAT
TANAGLVKLVNSMGAGSLVMTQAAVTNAIQTYPSLGKGQKIQDLRASRSAEVTYTSST
GFPIAVYVRISGGYSAVLYTHVNGIEFGDGGSTASNTSIAMAFFIVPNGATYLVEAT"
gene 284096..284221
/locus_tag="SARI_00288"
/db_xref="GeneID:5763533"
CDS 284096..284221
/locus_tag="SARI_00288"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569372.1"
/db_xref="GI:161502260"
/db_xref="GeneID:5763533"
/translation="MIMMAYYKDKNNAVYTYDAYITQDLYIKEGLVLIIRSHGNY"
gene 284208..284441
/locus_tag="SARI_00289"
/db_xref="GeneID:5763534"
CDS 284208..284441
/locus_tag="SARI_00289"
/inference="protein motif:HMMPfam:IPR003458"
/note="'COG: NOG18524 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569373.1"
/db_xref="GI:161502261"
/db_xref="InterPro:IPR003458"
/db_xref="GeneID:5763534"
/translation="MEIINPPPMHEDLIQAAENKRQRLLFRADWRTELMLGETSDANR
NKLSAWLANKNEVKLVDITTTPDNIIWPAPPEG"
misc_feature <284211..284435
/locus_tag="SARI_00289"
/note="Caudovirales tail fibre assembly protein; Region:
Caudo_TAP; pfam02413"
/db_xref="CDD:217022"
gene 284648..284866
/locus_tag="SARI_00290"
/db_xref="GeneID:5763535"
CDS 284648..284866
/locus_tag="SARI_00290"
/note="'Psort location: extracellular, including cell
wall, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569374.1"
/db_xref="GI:161502262"
/db_xref="GeneID:5763535"
/translation="MKYIKNIFLVLTFALSAAAFSTSAMAASDTKAPPKANDIPHDPL
PDMSKFCQDLLEGGGPIPPAMYQYCWQN"
gene complement(285259..285668)
/locus_tag="SARI_00291"
/note="Pseudogene compared to gi|16765208|ref|NP_460823.1|
phage-tail assembly-like protein [Salmonella typhimurium
LT2]"
/db_xref="GeneID:5763536"
gene 286235..288358
/locus_tag="SARI_00292"
/db_xref="GeneID:5763537"
CDS 286235..288358
/locus_tag="SARI_00292"
/inference="similar to AA sequence:INSD:AAD40326.1"
/note="'KEGG: gga:427844 4.7e-07 LOC427844; similar to
leucine-rich repeat kinase 1 K08843;
COG: COG4886 Leucine-rich repeat (LRR) protein;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="E3 ubiquitin-protein ligase SspH2"
/protein_id="YP_001569375.2"
/db_xref="GI:448236189"
/db_xref="GeneID:5763537"
/translation="MPFYVGSGCRPATISNHRIYLIARFDTPPEMSSWEKSKAFFCST
HQTEALECIRTICHPPAGTTREDVVSRFEQLRMLAYAGCEENIHSGLHGENHYCIMDE
DNQEILSVTLDDAGNYTVNCQEYSETYRLTMETEPGEEYTEHAEGASGTSRLPATTAP
QTAAEYYAVWSAWQRAAPEGEARGRAAAVKKMRDCLKNGNPVLCLERAGLTTLPDHLP
PHITILFIPGNNLTSLPALPSGLRELSVSYNQLTSLPPLPSGLWKLSVFNNQLASLPP
LPSGLQTLWAYHNQLPSLPALPPGLRDLSVSNNQLASLPALPSGLRKLWVSHNQLPSL
PELPSGLRALWVSHNQLASLPESITGLSSEATVDLEGNPLSERTLQTLRDITSAPDYS
GPRIRFDMAGPSVPREARALHLAVADWLMPAREGEPDPADRWHASGQEDNAAAFSLFL
DRLRETENFEKDAGFKAQISSWLALLAEDDVLRAKTFAMATEATSSCQDRITLALHHM
KNVQLVHNAEKGVYDNNLPGLVSTGREMFRMEMLERIAREKARTLAFVDEIEVYLAYQ
NKLKKPLGLTSVTAKMRFFGVSGVTASDLRSAERQVKAAEKREFSEWILQWGPLHSVL
ERKEPERFNALREKQISDYEHTYQMLSDTELKPSGLVGNTDAECTIGVRAMESAKKEF
LNGLRPLVEEMLGSYLKVKARWRLN"
misc_feature 286235..288355
/locus_tag="SARI_00292"
/note="E3 ubiquitin-protein ligase SspH2; Provisional;
Region: PRK15387"
/db_xref="CDD:185285"
misc_feature 286325..>286663
/locus_tag="SARI_00292"
/note="pathogenicity island 2 effector protein SseI;
Provisional; Region: PRK15372"
/db_xref="CDD:185270"
misc_feature 286667..>286756
/locus_tag="SARI_00292"
/note="Type III secretion system leucine rich repeat
protein; Region: TTSSLRR; pfam12468"
/db_xref="CDD:204932"
gene complement(288351..288503)
/locus_tag="SARI_00293"
/db_xref="GeneID:5763538"
CDS complement(288351..288503)
/locus_tag="SARI_00293"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569376.1"
/db_xref="GI:161502264"
/db_xref="GeneID:5763538"
/translation="MIYQHLWGTENQGLSRYSPVHYQCCLVLFVRDSLCFTTPHSPGA
VNIVLS"
gene 288563..288724
/locus_tag="SARI_00294"
/db_xref="GeneID:5763539"
CDS 288563..288724
/locus_tag="SARI_00294"
/note="'KEGG: sty:STY2205 3.2e-10 umuC; UmuC protein
K03502;
COG: COG0389 Nucleotidyltransferase/DNA polymerase
involved in DNA repair;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569377.1"
/db_xref="GI:161502265"
/db_xref="GeneID:5763539"
/translation="MEVLDQLNAKDGKGRLYFAGPGIQQQWEMKREKLSPDIPPAMKT
CFRLSARFN"
misc_feature <288563..288670
/locus_tag="SARI_00294"
/note="Domain of unknown function (DUF4113); Region:
DUF4113; pfam13438"
/db_xref="CDD:222129"
gene 289037..290836
/locus_tag="SARI_00295"
/db_xref="GeneID:5763540"
CDS 289037..290836
/locus_tag="SARI_00295"
/inference="protein motif:FPrintScan:IPR000795"
/inference="protein motif:Gene3D:IPR000640"
/inference="protein motif:HMMPfam:IPR000640"
/inference="protein motif:HMMPfam:IPR000795"
/inference="protein motif:HMMPfam:IPR004161"
/inference="protein motif:HMMPfam:IPR013842"
/inference="protein motif:HMMTigr:IPR005225"
/inference="protein motif:HMMTigr:IPR006297"
/inference="protein motif:ScanRegExp:IPR000795"
/inference="protein motif:superfamily:IPR009022"
/inference="protein motif:superfamily:IPR011051"
/note="binds to the ribosome on the universally-conserved
alpha-sarcin loop"
/codon_start=1
/transl_table=11
/product="GTP-binding protein LepA"
/protein_id="YP_001569378.1"
/db_xref="GI:161502266"
/db_xref="InterPro:IPR000640"
/db_xref="InterPro:IPR000795"
/db_xref="InterPro:IPR004161"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR006297"
/db_xref="InterPro:IPR009022"
/db_xref="InterPro:IPR011051"
/db_xref="InterPro:IPR013842"
/db_xref="GeneID:5763540"
/translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
DLERERGITIKAQSVTLDFKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR
CSAKTGVGVTDVLERLVRDIPPPQGDPDGPLQALIIDSWFDNYLGVVSLVRIKNGTMR
KGDKIKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDILGAPVGDTLTS
ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYESFRDALGKLSLNDASLFYEPENSSAL
GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTAKEIIYVDSPSKLPP
LNNIYELREPIAECHMLLPQAYLGNVITLCIEKRGVQTNMVYHGNQVALTYEIPMAEV
VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINNERVDALALITHRDNAQNRG
RELVDKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
misc_feature 289037..290827
/locus_tag="SARI_00295"
/note="GTP-binding protein LepA; Provisional; Region:
PRK05433"
/db_xref="CDD:235462"
misc_feature 289049..289576
/locus_tag="SARI_00295"
/note="LepA also known as Elongation Factor 4 (EF4);
Region: LepA; cd01890"
/db_xref="CDD:206677"
misc_feature 289067..289090
/locus_tag="SARI_00295"
/note="G1 box; other site"
/db_xref="CDD:206677"
misc_feature order(289070..289072,289076..289078,289088..289093,
289100..289102,289109..289114,289205..289210,
289277..289282,289349..289354,289460..289462,
289472..289474)
/locus_tag="SARI_00295"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206677"
misc_feature order(289076..289093,289427..289432,289436..289438,
289520..289528)
/locus_tag="SARI_00295"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206677"
misc_feature 289172..289207
/locus_tag="SARI_00295"
/note="Switch I region; other site"
/db_xref="CDD:206677"
misc_feature 289193..289195
/locus_tag="SARI_00295"
/note="G2 box; other site"
/db_xref="CDD:206677"
misc_feature 289265..289276
/locus_tag="SARI_00295"
/note="G3 box; other site"
/db_xref="CDD:206677"
misc_feature 289271..289327
/locus_tag="SARI_00295"
/note="Switch II region; other site"
/db_xref="CDD:206677"
misc_feature 289427..289438
/locus_tag="SARI_00295"
/note="G4 box; other site"
/db_xref="CDD:206677"
misc_feature 289520..289528
/locus_tag="SARI_00295"
/note="G5 box; other site"
/db_xref="CDD:206677"
misc_feature 289613..289864
/locus_tag="SARI_00295"
/note="lepA_II: This subfamily represents the domain II of
LepA, a GTP-binding protein localized in the cytoplasmic
membrane. The N-terminal domain of LepA shares regions of
homology to translation factors. In terms of interaction
with the ribosome, EF-G, EF-Tu...; Region: lepA_II;
cd03699"
/db_xref="CDD:239670"
misc_feature 290237..290473
/locus_tag="SARI_00295"
/note="lepA_C: This family represents the C-terminal
region of LepA, a GTP-binding protein localized in the
cytoplasmic membrane. LepA is ubiquitous in Bacteria and
Eukaryota (e.g. Saccharomyces cerevisiae GUF1p), but is
missing from Archaea. LepA exhibits...; Region: lepA_C;
cd03709"
/db_xref="CDD:239680"
misc_feature 290495..290818
/locus_tag="SARI_00295"
/note="GTP-binding protein LepA C-terminus; Region:
LepA_C; pfam06421"
/db_xref="CDD:203441"
unsure 290183..290270
/locus_tag="SARI_00295"
/note="Sequence derived from one plasmid subclone"
gene 290853..291827
/locus_tag="SARI_00296"
/db_xref="GeneID:5760672"
CDS 290853..291827
/locus_tag="SARI_00296"
/inference="protein motif:HMMPanther:IPR000223"
/inference="protein motif:HMMPfam:IPR006198"
/inference="protein motif:HMMTigr:IPR000223"
/inference="protein motif:ScanRegExp:IPR000223"
/inference="protein motif:superfamily:IPR011056"
/inference="similar to AA sequence:REFSEQ:YP_217564.1"
/note="catalyzes the cleavage of the amino-terminal leader
peptide from secretory proteins"
/codon_start=1
/transl_table=11
/product="signal peptidase I"
/protein_id="YP_001569379.1"
/db_xref="GI:161502267"
/db_xref="InterPro:IPR000223"
/db_xref="InterPro:IPR006198"
/db_xref="InterPro:IPR011056"
/db_xref="GeneID:5760672"
/translation="MANMFALILVIATLVTGILWCVDKFVFAPKRRARQAAAQTATGD
ALDNATLNKVAPKPGWLETGASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFI
LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKITYDP
IAKEVTIQPGCSSGQACENALPVTYSNVEPSDFVQTFARRNGGEATSGFFEVPLNETK
ENGIRLTERKETLGDVTHRILMVPIAQDQLGMYYQQPGQPLATWVVPPGQYFMMGDNR
DNSADSRYWGFVPEANLVGKAVAIWMSFDKQEGEWPTGVRLSRIGGIH"
misc_feature 290853..291824
/locus_tag="SARI_00296"
/note="signal peptidase I; Provisional; Region: PRK10861"
/db_xref="CDD:182787"
misc_feature 291099..>291305
/locus_tag="SARI_00296"
/note="The S26 Type I signal peptidase (SPase; LepB;
leader peptidase B; leader peptidase I; EC 3.4.21.89)
family members are essential membrane-bound serine
proteases that function to cleave the amino-terminal
signal peptide extension from proteins that are...;
Region: S26_SPase_I; cd06530"
/db_xref="CDD:119398"
misc_feature order(291123..291125,291288..291290)
/locus_tag="SARI_00296"
/note="Catalytic site [active]"
/db_xref="CDD:119398"
misc_feature <291657..291743
/locus_tag="SARI_00296"
/note="The S26 Type I signal peptidase (SPase; LepB;
leader peptidase B; leader peptidase I; EC 3.4.21.89)
family members are essential membrane-bound serine
proteases that function to cleave the amino-terminal
signal peptide extension from proteins that are...;
Region: S26_SPase_I; cd06530"
/db_xref="CDD:119398"
misc_feature 291944..292155
/inference="nucleotide motif:Rfam:RF00552"
/note="rncO; Rfam score 223.8; SARI_00297"
gene 292778..293683
/gene="era"
/locus_tag="SARI_00298"
/db_xref="GeneID:5764317"
CDS 292778..293683
/gene="era"
/locus_tag="SARI_00298"
/inference="protein motif:HMMPfam:IPR002917"
/inference="protein motif:HMMPfam:IPR004044"
/inference="protein motif:HMMTigr:IPR005225"
/inference="protein motif:HMMTigr:IPR005289"
/inference="protein motif:HMMTigr:IPR005662"
/inference="similar to AA sequence:INSD:AAO68002.1"
/note="Era; Escherichia coli Ras-like protein; Bex;
Bacillus Era-complementing segment; essential protein in
Escherichia coli that is involved in many cellular
processes; GTPase; binds the cell membrane through
apparent C-terminal domain; mutants are arrested during
the cell cycle; Streptococcus pneumoniae Era binds to RNA
and Escherichia coli Era binds 16S rRNA and 30S ribosome"
/codon_start=1
/transl_table=11
/product="GTP-binding protein Era"
/protein_id="YP_001569380.1"
/db_xref="GI:161502268"
/db_xref="InterPro:IPR002917"
/db_xref="InterPro:IPR004044"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR005289"
/db_xref="InterPro:IPR005662"
/db_xref="GeneID:5764317"
/translation="MSIEKTYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
HRIVGIHTEGPYQAIYVDTPGLHIEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
PDDEMVLNKLRDGKAPVILAVNKVDNVQEKADLLPHLQFLASQMSFLDIVPISAETGM
NVDTIASIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
ERFVTNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
LWVKVKSGWADDERALRSLGYVDDL"
misc_feature 292787..293668
/gene="era"
/locus_tag="SARI_00298"
/note="GTPase Era; Reviewed; Region: era; PRK00089"
/db_xref="CDD:234624"
misc_feature 292793..293296
/gene="era"
/locus_tag="SARI_00298"
/note="E. coli Ras-like protein (Era) is a multifunctional
GTPase; Region: Era; cd04163"
/db_xref="CDD:206726"
misc_feature 292820..292843
/gene="era"
/locus_tag="SARI_00298"
/note="G1 box; other site"
/db_xref="CDD:206726"
misc_feature order(292826..292846,292886..292888,292898..292906,
292970..292972,293147..293152,293156..293158,
293240..293245)
/gene="era"
/locus_tag="SARI_00298"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206726"
misc_feature order(292865..292867,292871..292915)
/gene="era"
/locus_tag="SARI_00298"
/note="Switch I region; other site"
/db_xref="CDD:206726"
misc_feature 292904..292906
/gene="era"
/locus_tag="SARI_00298"
/note="G2 box; other site"
/db_xref="CDD:206726"
misc_feature order(292958..292975,293036..293041)
/gene="era"
/locus_tag="SARI_00298"
/note="Switch II region; other site"
/db_xref="CDD:206726"
misc_feature 292961..292972
/gene="era"
/locus_tag="SARI_00298"
/note="G3 box; other site"
/db_xref="CDD:206726"
misc_feature 293147..293158
/gene="era"
/locus_tag="SARI_00298"
/note="G4 box; other site"
/db_xref="CDD:206726"
misc_feature 293240..293248
/gene="era"
/locus_tag="SARI_00298"
/note="G5 box; other site"
/db_xref="CDD:206726"
misc_feature 293402..293635
/gene="era"
/locus_tag="SARI_00298"
/note="KH domain; Region: KH_2; pfam07650"
/db_xref="CDD:203707"
gene 293755..294423
/locus_tag="SARI_00299"
/db_xref="GeneID:5764318"
CDS 293755..294423
/locus_tag="SARI_00299"
/inference="protein motif:HMMPfam:IPR003717"
/inference="protein motif:HMMTigr:IPR003717"
/inference="similar to AA sequence:INSD:AAO68003.1"
/note="'COG: COG1381 Recombinational DNA repair protein
(RecF pathway);
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569381.1"
/db_xref="GI:161502269"
/db_xref="InterPro:IPR003717"
/db_xref="GeneID:5764318"
/translation="MLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLRYSGRG
EVKTLRSAEAVSLALPLNGITLYSGLYINELLSRVLEYETRFSELFFDYLNCIQALAG
TTGSPEPVLRRFELALLGHLGYGVNFTHCAGSGEQVDDTMTYRYREEKGFIASVVIDN
NTFTGRHLKALEAREFPDVDTLRAAKRFTRMALKPYLGGKPLKSRELFRRFMPKRTVK
MKKD"
misc_feature 293755..294402
/locus_tag="SARI_00299"
/note="DNA repair protein RecO; Reviewed; Region: recO;
PRK00085"
/db_xref="CDD:234622"
misc_feature <293755..293922
/locus_tag="SARI_00299"
/note="Recombination protein O N terminal; Region: RecO_N;
pfam11967"
/db_xref="CDD:221346"
misc_feature 293932..294372
/locus_tag="SARI_00299"
/note="Recombination protein O C terminal; Region: RecO_C;
pfam02565"
/db_xref="CDD:217107"
gene 294435..295166
/locus_tag="SARI_00300"
/db_xref="GeneID:5764319"
CDS 294435..295166
/locus_tag="SARI_00300"
/inference="protein motif:BlastProDom:IPR004569"
/inference="protein motif:HMMPfam:IPR004569"
/inference="protein motif:HMMTigr:IPR004569"
/inference="similar to AA sequence:REFSEQ:YP_217560.1"
/note="involved in the de novo synthesis of pyridoxine
(Vitamin B6)"
/codon_start=1
/transl_table=11
/product="pyridoxine 5'-phosphate synthase"
/protein_id="YP_001569382.1"
/db_xref="GI:161502270"
/db_xref="InterPro:IPR004569"
/db_xref="GeneID:5764319"
/translation="MAELLLGVNIDHIATLRNARGTDYPDPVQAAFIAEQAGADGITV
HLREDRRHISDRDVRILRQTLHTRMNLEMAVTEEMLAIAVETRPHFCCLVPEKRQEVT
TEGGLDVAGQRDKMRDACSRLAAAGIQVSLFIDADEAQINAAAEVGAPFIEIHTGCYA
NAKTDAEQSKELARIASAATLAVRLGLKVNAGHGLTYHNVKAIAALPEMHELNIGHAI
IGRAVMSGLKEAVAEMKRLMLEARG"
misc_feature 294447..295148
/locus_tag="SARI_00300"
/note="Pyridoxine 5'-phosphate (PNP) synthase domain;
pyridoxal 5'-phosphate is the active form of vitamin B6
that acts as an essential, ubiquitous coenzyme in amino
acid metabolism. In bacteria, formation of pyridoxine
5'-phosphate is a step in...; Region: PNPsynthase;
cd00003"
/db_xref="CDD:237977"
misc_feature order(294459..294461,294465..294470,294492..294494,
294567..294569,294573..294575,294585..294590,
294648..294650,294738..294743,294750..294752,
294831..294833,294891..294893,295011..295016,
295077..295082)
/locus_tag="SARI_00300"
/note="active site"
/db_xref="CDD:237977"
misc_feature order(294459..294461,294561..294563,294636..294638,
294642..294644,294648..294650,294702..294704,
294708..294710,294825..294827,294831..294833,
294885..294887,294891..294893,295002..295004,
295011..295013,295062..295067,295071..295073)
/locus_tag="SARI_00300"
/note="hydrophilic channel; other site"
/db_xref="CDD:237977"
misc_feature order(294492..294494,294912..294917)
/locus_tag="SARI_00300"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:237977"
misc_feature order(294567..294569,294648..294650,294891..294893,
295011..295013)
/locus_tag="SARI_00300"
/note="catalytic residues [active]"
/db_xref="CDD:237977"
misc_feature 294720..294752
/locus_tag="SARI_00300"
/note="active site lid [active]"
/db_xref="CDD:237977"
gene 295166..295561
/gene="acpS"
/locus_tag="SARI_00301"
/db_xref="GeneID:5764320"
CDS 295166..295561
/gene="acpS"
/locus_tag="SARI_00301"
/inference="protein motif:BlastProDom:IPR004568"
/inference="protein motif:HMMPfam:IPR008278"
/inference="protein motif:HMMTigr:IPR002582"
/inference="protein motif:HMMTigr:IPR004568"
/inference="protein motif:superfamily:IPR008278"
/inference="similar to AA sequence:INSD:AAV76310.1"
/note="'Catalyzes the formation of holo-ACP, which
mediates the essential transfer of acyl fatty acid
intermediates during the biosynthesis of fatty acids and
lipids'"
/codon_start=1
/transl_table=11
/product="4'-phosphopantetheinyl transferase"
/protein_id="YP_001569383.1"
/db_xref="GI:161502271"
/db_xref="InterPro:IPR002582"
/db_xref="InterPro:IPR004568"
/db_xref="InterPro:IPR008278"
/db_xref="GeneID:5764320"
/translation="MAILGLGTDIVEISRIEAVISRSGERLARRVLSANEWAIWETHQ
QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALTLAEKL
GVTHMHVTLADERHYACATVILESQISAG"
misc_feature 295169..295546
/gene="acpS"
/locus_tag="SARI_00301"
/note="4'-phosphopantetheinyl transferase; Provisional;
Region: acpS; PRK00070"
/db_xref="CDD:234610"
gene complement(295642..295911)
/locus_tag="SARI_00302"
/db_xref="GeneID:5764321"
CDS complement(295642..295911)
/locus_tag="SARI_00302"
/inference="protein motif:HMMPfam:IPR001450"
/inference="protein motif:ScanRegExp:IPR001450"
/inference="similar to AA sequence:INSD:CAD02778.1"
/note="'KEGG: bte:BTH_II0708 2.0e-06 fdxH; formate
dehydrogenase, beta subunit K00124;
COG: COG1145 Ferredoxin;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569384.1"
/db_xref="GI:161502272"
/db_xref="InterPro:IPR001450"
/db_xref="GeneID:5764321"
/translation="MALLITKKCINCDMCEPECPNEAISMGDSIYEINSDKCTECVGH
YETPTCQKVCPIPNTILQDPTHVETEEQLWDKFVLMHHADKLQAS"
misc_feature complement(295747..295887)
/locus_tag="SARI_00302"
/note="4Fe-4S dicluster domain; Region: Fer4_7; pfam12838"
/db_xref="CDD:221801"
gene complement(295967..296815)
/locus_tag="SARI_00303"
/db_xref="GeneID:5764322"
CDS complement(295967..296815)
/locus_tag="SARI_00303"
/inference="protein motif:HMMPfam:IPR000281"
/inference="protein motif:HMMPfam:IPR001347"
/inference="similar to AA sequence:INSD:AAX66473.1"
/note="'KEGG: bte:BTH_I1550 1.0e-22
glucokinase/transcriptional regulator, RpiR family, fusion
K00845;
COG: COG1737 Transcriptional regulators;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="putative DNA-binding transcriptional regulator"
/protein_id="YP_001569385.1"
/db_xref="GI:161502273"
/db_xref="InterPro:IPR000281"
/db_xref="InterPro:IPR001347"
/db_xref="GeneID:5764322"
/translation="MNCLIRIRQHYPDLAQSDKKLADYLLAQPDTARHLSSQQLAAEA
GISQSSVVKFAQKLGFKGFPALKLAISEALASNPNPHSIPVHNQIRGDDPMRLVGEKL
IKENVAAMHATLDVNSEEKLLESVAMLRHARRIVITGMGASGLVAQNFAWKLLKIGVN
AGVERDMHALLSTVQALAPGDLLLAISYSGERRELKLAADETLRTGAKILAITGFSPN
ALQQRATRCLYTIAEEQATRSAAISSTHAQMMLTDLLFMALVQQDLERAPERIRHSEA
LVKKLI"
misc_feature complement(296588..296815)
/locus_tag="SARI_00303"
/note="Helix-turn-helix domain, rpiR family; Region:
HTH_6; pfam01418"
/db_xref="CDD:201784"
misc_feature complement(295970..296803)
/locus_tag="SARI_00303"
/note="putative DNA-binding transcriptional regulator;
Provisional; Region: PRK11557"
/db_xref="CDD:183195"
misc_feature complement(296042..296458)
/locus_tag="SARI_00303"
/note="RpiR-like protein. RpiR contains a SIS (Sugar
ISomerase) domain, which is found in many phosphosugar
isomerases and phosphosugar binding proteins. In E. coli,
rpiR negatively regulates the expression of rpiB gene.
Both rpiB and rpiA are ribose phosphate...; Region:
SIS_RpiR; cd05013"
/db_xref="CDD:240144"
misc_feature complement(order(296255..296257,296387..296389))
/locus_tag="SARI_00303"
/note="putative active site [active]"
/db_xref="CDD:240144"
gene 296931..297824
/gene="murQ"
/locus_tag="SARI_00304"
/db_xref="GeneID:5764323"
CDS 296931..297824
/gene="murQ"
/locus_tag="SARI_00304"
/inference="protein motif:HMMPfam:IPR001347"
/inference="protein motif:HMMTigr:IPR005488"
/inference="protein motif:ScanRegExp:IPR005486"
/inference="similar to AA sequence:SwissProt:Q8ZN25"
/note="catalyzes the cleavage of the lactyl ether moiety
of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form
N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate;
involved in MurNAc dissimilation pathway"
/codon_start=1
/transl_table=11
/product="N-acetylmuramic acid-6-phosphate etherase"
/protein_id="YP_001569386.1"
/db_xref="GI:161502274"
/db_xref="InterPro:IPR001347"
/db_xref="InterPro:IPR005486"
/db_xref="InterPro:IPR005488"
/db_xref="GeneID:5764323"
/translation="MNLGALVSETRNPQTMDLDALPTPELVKRFNEQDTLVAEAVKAT
LTEVARAVDAAAAALQSGGRIIYMGAGTSGRLGVLDASECPPTFGVPHGLVVGLIAGG
PGALLKAVEGAEDSQQAGEDDLVALNLQEEDLVVGLAASGRTPYVIGGLRYARQSGCT
TVAVSCNPDSPIAREANIAISPVVGPEALTGSTRLKSGTAQKMVLNMISTGAMVKFGK
VYQNLMVDMKATNVKLVDRACRMVVEATGISREEAETLLKQTDFEVKPAILMALTGLD
AAAAREKLAAHQGFLRAALEH"
misc_feature 296931..297821
/gene="murQ"
/locus_tag="SARI_00304"
/note="N-acetylmuramic acid-6-phosphate etherase;
Reviewed; Region: murQ; PRK05441"
/db_xref="CDD:235467"
misc_feature 296970..297740
/gene="murQ"
/locus_tag="SARI_00304"
/note="N-acetylmuramic acid 6-phosphate etherase. Members
of this family contain the SIS (Sugar ISomerase) domain.
The SIS domain is found in many phosphosugar isomerases
and phosphosugar binding proteins. The bacterial cell wall
sugar N-acetylmuramic acid...; Region: SIS_Etherase;
cd05007"
/db_xref="CDD:240140"
misc_feature order(297147..297149,297345..297347)
/gene="murQ"
/locus_tag="SARI_00304"
/note="putative active site [active]"
/db_xref="CDD:240140"
gene 297914..298314
/locus_tag="SARI_00305"
/pseudogene="unknown"
/db_xref="GeneID:5764324"
gene 298318..298953
/locus_tag="SARI_00306"
/db_xref="GeneID:5764325"
CDS 298318..298953
/locus_tag="SARI_00306"
/inference="protein motif:HMMTigr:IPR006435"
/inference="similar to AA sequence:REFSEQ:NP_461504.1"
/note="'COG: COG0560 Phosphoserine phosphatase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569388.1"
/db_xref="GI:161502276"
/db_xref="InterPro:IPR006435"
/db_xref="GeneID:5764325"
/translation="MVSQERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPL
LPVIGLGLLAKGRAARWPMSLLLWGCTFGHSETRLQAHQADFVRWFRANVTAFPVVQE
RLTTYLLSSDADIWLITGSPQSLVEQVYFDTPWLPRVNLIASQMARRYGGWVLTVRCL
GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPHGELQQLE"
misc_feature 298318..298950
/locus_tag="SARI_00306"
/note="hypothetical protein; Provisional; Region:
PRK11590"
/db_xref="CDD:183218"
misc_feature 298330..298950
/locus_tag="SARI_00306"
/note="Phosphoserine phosphatase [Amino acid transport and
metabolism]; Region: SerB; COG0560"
/db_xref="CDD:223634"
gene 298978..299508
/locus_tag="SARI_00307"
/db_xref="GeneID:5764326"
CDS 298978..299508
/locus_tag="SARI_00307"
/inference="protein motif:HMMPfam:IPR002125"
/inference="protein motif:ScanRegExp:IPR002125"
/inference="similar to AA sequence:INSD:CAD02770.1"
/note="'KEGG: stt:t0289 3.5e-90 yfhC; hypothetical protein
K01500;
COG: COG0590 Cytosine/adenosine deaminases;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="tRNA-specific adenosine deaminase"
/protein_id="YP_001569389.1"
/db_xref="GI:161502277"
/db_xref="InterPro:IPR002125"
/db_xref="GeneID:5764326"
/translation="MPPAFITGVTSLSDVELDHEYWMRHALTLAKRAWDEREVPVGAV
LVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVLQNYRLLDTTLYVTLEPCVMCA
GAMVHSRIRRVVFGARDAKTGAAGSLIDVLHHPGMNHRVEIIEGVLHDECAMLLSDFF
RMRRQEIKALKKAARA"
misc_feature 299044..299367
/locus_tag="SARI_00307"
/note="Nucleoside deaminases include adenosine, guanine
and cytosine deaminases. These enzymes are Zn dependent
and catalyze the deamination of nucleosides. The zinc ion
in the active site plays a central role in the proposed
catalytic mechanism, activating a...; Region:
nucleoside_deaminase; cd01285"
/db_xref="CDD:238612"
misc_feature order(299098..299100,299146..299148,299179..299187,
299269..299271,299278..299280)
/locus_tag="SARI_00307"
/note="nucleoside/Zn binding site; other site"
/db_xref="CDD:238612"
misc_feature order(299173..299175,299188..299190,299200..299202,
299272..299277,299284..299289,299296..299301)
/locus_tag="SARI_00307"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238612"
misc_feature order(299179..299187,299266..299271,299278..299280)
/locus_tag="SARI_00307"
/note="catalytic motif [active]"
/db_xref="CDD:238612"
gene complement(299544..301088)
/locus_tag="SARI_00308"
/db_xref="GeneID:5764327"
CDS complement(299544..301088)
/locus_tag="SARI_00308"
/inference="protein motif:HMMPfam:IPR008258"
/inference="protein motif:HMMSmart:IPR001638"
/inference="protein motif:ScanRegExp:IPR000189"
/inference="similar to AA sequence:REFSEQ:NP_461502.1"
/note="'YfhD; uncharacterized member of the
transglycosylase slt family; part of the rob operon, which
plays a role in cellular resistance to antibiotics,
bactericidal agents, and organic solvents; unknown
function'"
/codon_start=1
/transl_table=11
/product="putative transglycosylase"
/protein_id="YP_001569390.1"
/db_xref="GI:161502278"
/db_xref="InterPro:IPR000189"
/db_xref="InterPro:IPR001638"
/db_xref="InterPro:IPR008258"
/db_xref="GeneID:5764327"
/translation="MKKLKINYLFIGILTLLLAAALWPSIPWFGKTENHVAAIQARGV
LRVSTIDSPLTYAVVNGKKYGLDYELAQQFANYLGVKLKITVRQNISQLFDDLDNGNA
DLLAAGLVYDSARVKKYQPGPMYYSVSQQLVYRVGQYRPRSLATVTENQLTIAPGHVV
VNDLQRLKETKFPDLSWKVDDKKGSTTLLEDVINGKLDYTIADSVAISLFQRVHPELA
VALDVTDEQPVTWFSRLDDDNTLSAALLDFFNSINEDGSLARIEEKYLGHGDDFDYVD
TRSFLRAVDNVLPELEALFKKYAKEIDWRLLAAISYQESHWDPQATSPTGVRGLMMLT
KNTAQSLGLTDRTDAEQSISGGARYLEDMMAKVPETVPEDERIWFALAAYNMGYAHML
DARALTVKTKGNPDSWTDVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS
LVGYLQEKEKQEAEAMKLAQDYPAASPEELNKAPFPFISFLSQSSGYLTHSPSLLFTP
QKKEEK"
misc_feature complement(299643..301088)
/locus_tag="SARI_00308"
/note="membrane-bound lytic transglycosylase F;
Provisional; Region: PRK10859"
/db_xref="CDD:236778"
misc_feature complement(300291..300950)
/locus_tag="SARI_00308"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cd00134"
/db_xref="CDD:238078"
misc_feature complement(order(300480..300482,300588..300590,
300744..300746,300819..300821,300936..300938))
/locus_tag="SARI_00308"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:238078"
misc_feature complement(order(300501..300503,300519..300521,
300531..300533))
/locus_tag="SARI_00308"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:238078"
misc_feature complement(300396..300413)
/locus_tag="SARI_00308"
/note="hinge residues; other site"
/db_xref="CDD:238078"
misc_feature complement(299901..300179)
/locus_tag="SARI_00308"
/note="Lytic Transglycosylase (LT) and Goose Egg White
Lysozyme (GEWL) domain. Members include the soluble and
insoluble membrane-bound LTs in bacteria, the LTs in
bacteriophage lambda, as well as, the eukaryotic
'goose-type' lysozymes (GEWL). LTs...; Region: LT_GEWL;
cd00254"
/db_xref="CDD:238157"
misc_feature complement(order(299937..299939,300012..300014,
300087..300089,300147..300149))
/locus_tag="SARI_00308"
/note="N-acetyl-D-glucosamine binding site [chemical
binding]; other site"
/db_xref="CDD:238157"
misc_feature complement(300147..300149)
/locus_tag="SARI_00308"
/note="catalytic residue [active]"
/db_xref="CDD:238157"
gene complement(301093..301230)
/locus_tag="SARI_00309"
/db_xref="GeneID:5764328"
CDS complement(301093..301230)
/locus_tag="SARI_00309"
/inference="similar to AA sequence:REFSEQ:YP_217548.1"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569391.1"
/db_xref="GI:161502279"
/db_xref="GeneID:5764328"
/translation="MSYGAAIDANKLPTGALLRKMPLIDDLSIAAQHLFQPEATHDPE
N"
gene 301344..305231
/locus_tag="SARI_00310"
/db_xref="GeneID:5764329"
CDS 301344..305231
/locus_tag="SARI_00310"
/inference="protein motif:HMMPfam:IPR000728"
/inference="protein motif:HMMPfam:IPR010918"
/inference="protein motif:HMMTigr:IPR010073"
/note="catalyzes the formation of
2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from
N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and
L-glutamine in purine biosynthesis"
/codon_start=1
/transl_table=11
/product="phosphoribosylformylglycinamidine synthase"
/protein_id="YP_001569392.1"
/db_xref="GI:161502280"
/db_xref="InterPro:IPR000728"
/db_xref="InterPro:IPR010073"
/db_xref="InterPro:IPR010918"
/db_xref="GeneID:5764329"
/translation="MMEILRGSPALSAFRINKLLARFQAARLQVHNIYAEYVHFADLN
APLNDNEQAQLTRLLQYGPALSSHTPTGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ
VDRLERGVAYYIEASTLTAEQWRQVAAELHDRMMETVFSSLTDAEKLFIHHQPAPVSS
VDLLAEGRQALIAANLRLGLALAEDEIDYLQAAFTKLGRNPNDIELYMFAQANSEHCR
HKIFNADWIIDGKPQPKSLFKMIKNTFETTPDHVLSAYKDNAAVMEGSAVGRYFADHN
TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
FSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALTGYFRTY
EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEIVVGAKLIVLGGPAMNIGLGG
GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL
SNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDKL
CKRERAPYAVIGEATEEQHLSLHDNHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD
ALNRADITIADAVNRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAV
TTASLDSYYGEAMSIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW
MAAAGHPGEDAGLYDAVKAIGEEMCPQLGLTIPVGKDSMSMKTRWQEGNEQREMTSPL
SLVISAFARVEDVRHTITPQLSTEDNVLLLIDLGKGHSALGATALAQVYRQLGDTPAD
VRDVAQLKGFYEAIQALVAARKLLAYHDRSDGGLLVTLAEMAFAGHCGVQVDIAALGD
DHLAALFNEELGGVIQVRAEDRDAVEALLAQYGLADCVHYLGQALAGDRFVITAHDQT
VFSESRTTLRVWWAETTWQMQRLRDNPQCADQEHEEKANDADPGLNVKLSFDINEDIA
APYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFQAL
VACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRE
LIPGSELWPRFMRNHSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR
DDAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTNENGRVTIMMPHPE
RVFRTVANSWHPENWGEDSPWMRIFRNARKQLG"
misc_feature 301347..305228
/locus_tag="SARI_00310"
/note="phosphoribosylformylglycinamidine synthase;
Provisional; Region: PRK05297"
/db_xref="CDD:235394"
misc_feature 301956..303143
/locus_tag="SARI_00310"
/note="PurL subunit of the formylglycinamide
ribonucleotide amidotransferase (FGAR-AT), first repeat.
FGAR-AT catalyzes the ATP-dependent conversion of
formylglycinamide ribonucleotide (FGAR) and glutamine to
formylglycinamidine ribonucleotide (FGAM), ADP; Region:
PurL_repeat1; cd02203"
/db_xref="CDD:100034"
misc_feature order(302205..302216,302220..302222,302295..302297,
302331..302333,302340..302342,302349..302351,
302505..302507,302571..302576,302586..302588)
/locus_tag="SARI_00310"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100034"
misc_feature order(302283..302285,302295..302297,302499..302507)
/locus_tag="SARI_00310"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100034"
misc_feature 303414..304217
/locus_tag="SARI_00310"
/note="Formylglycinamide ribonucleotide amidotransferase
(FGAR-AT) catalyzes the ATP-dependent conversion of
formylglycinamide ribonucleotide (FGAR) and glutamine to
formylglycinamidine ribonucleotide (FGAM), ADP, phosphate,
and glutamate in the fourth step of...; Region: PurL;
cd02193"
/db_xref="CDD:100029"
misc_feature order(303417..303428,303432..303434,303507..303509,
303546..303548,303555..303557,303564..303566,
303669..303671,303735..303740,303750..303752)
/locus_tag="SARI_00310"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100029"
misc_feature order(303495..303497,303507..303509,303663..303671)
/locus_tag="SARI_00310"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100029"
misc_feature 304467..305216
/locus_tag="SARI_00310"
/note="Type 1 glutamine amidotransferase (GATase1)-like
domain found in Formylglycinamide ribonucleotide
amidotransferase; Region: GATase1_FGAR_AT; cd01740"
/db_xref="CDD:153211"
misc_feature order(304620..304625,304635..304637,304746..304748,
304758..304760,304926..304931,305115..305117,
305121..305132)
/locus_tag="SARI_00310"
/note="putative active site [active]"
/db_xref="CDD:153211"
misc_feature order(304746..304748,305121..305123,305127..305129)
/locus_tag="SARI_00310"
/note="catalytic triad [active]"
/db_xref="CDD:153211"
gene complement(305504..305652)
/locus_tag="SARI_00311"
/db_xref="GeneID:5764330"
misc_RNA complement(305504..305652)
/locus_tag="SARI_00311"
/product="tke1 RNA"
/inference="nucleotide motif:Rfam:RF00128"
/note="Rfam score 177.53"
/db_xref="GeneID:5764330"
gene 305792..307177
/locus_tag="SARI_00312"
/db_xref="GeneID:5764331"
CDS 305792..307177
/locus_tag="SARI_00312"
/inference="protein motif:FPrintScan:IPR004358"
/inference="protein motif:Gene3D:IPR003594"
/inference="protein motif:HMMPfam:IPR003594"
/inference="protein motif:HMMPfam:IPR003660"
/inference="protein motif:HMMPfam:IPR003661"
/inference="protein motif:HMMSmart:IPR003594"
/inference="protein motif:HMMSmart:IPR003661"
/inference="protein motif:superfamily:IPR003594"
/inference="protein motif:superfamily:IPR009082"
/inference="similar to AA sequence:REFSEQ:YP_217546.1"
/note="'KEGG: sec:SC2559 8.7e-236 yfhK; putative sensory
kinase in regulatory system K07711;
COG: COG0642 Signal transduction histidine kinase;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569393.1"
/db_xref="GI:161502281"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR009082"
/db_xref="GeneID:5764331"
/translation="MLAFLLILLPLLVLAWQAWQSLNALSDQAAVTNRSTLIDARRSE
AMTNVALEMERSYRQYCVLDDPTLAKVYQSQRKRYSDMLDAHAGVLPDDKLYQALRQD
LNALAQLQCKDSGPEAAAAARLEAFANANTEMVQATRTVVYSRGQQLQQEIAERGQFF
GWQALVLFLVSLAMVLLFTRMIIGPVKGIERMINRLGEGHSLGNTVTFTGPRELRSVG
QRIIWLSERLAWLESQRHQFLRHLSHELKTPLASMREGTELLADRVVGPLTPEQKEVV
DILDVSSRNLQKLIEQLLDYNRKLVDSATELETVDIAPLVDMVVSAHSLPARAKMMHT
DVDLEVERCIAEPMLLMSVLDNLYSNAVHYGAESGNICIRSRSQGSMVYIDVINSGEP
IPQTESEMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGEIRLVDANAQEVCFR
ISLPLPASDKH"
misc_feature 306188..307174
/locus_tag="SARI_00312"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:223715"
misc_feature 306269..306475
/locus_tag="SARI_00312"
/note="HAMP domain; Region: HAMP; pfam00672"
/db_xref="CDD:216054"
misc_feature 306485..306685
/locus_tag="SARI_00312"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(306503..306505,306515..306517,306527..306529,
306536..306538,306548..306550,306557..306559,
306614..306616,306626..306628,306635..306637,
306647..306649,306656..306658,306668..306670)
/locus_tag="SARI_00312"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 306521..306523
/locus_tag="SARI_00312"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 306839..307150
/locus_tag="SARI_00312"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature order(306857..306859,306869..306871,306878..306880,
306947..306949,306953..306955,306959..306961,
306965..306970,307049..307060,307106..307108,
307112..307114,307127..307132,307136..307138)
/locus_tag="SARI_00312"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature 306869..306871
/locus_tag="SARI_00312"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature order(306959..306961,306965..306967,307049..307051,
307055..307057)
/locus_tag="SARI_00312"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
unsure 306884..307026
/locus_tag="SARI_00312"
/note="Sequence derived from one plasmid subclone"
gene 307179..307937
/locus_tag="SARI_00313"
/db_xref="GeneID:5764332"
CDS 307179..307937
/locus_tag="SARI_00313"
/inference="similar to AA sequence:REFSEQ:NP_804169.1"
/note="'COG: NOG06210 non supervised orthologous group;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569394.1"
/db_xref="GI:161502282"
/db_xref="GeneID:5764332"
/translation="MNLSLVSMPHVLVQTIKRCLFRGVIPASISCLALAACVPYTVQQ
RPGSAAQDKLPHYQLADYLPTACADIWSLRGQSVDTNPLYWLRAIDCAERLMPVQSRA
EARALTDDNWQTAFRRGILLADAKITPPERRAIVSRLEALSAQIPAQVRPVYQIWHDG
QALQLALSAERQRYSKLQQTSDSELDALRQQQQALQTQLELTTRKLESLTDIERQLST
RKPAENYNADTSHTNDKPATSEDGAAPSQDEVTP"
misc_feature 307200..307934
/locus_tag="SARI_00313"
/note="hypothetical protein; Provisional; Region:
PRK10722"
/db_xref="CDD:236745"
gene 307934..309271
/locus_tag="SARI_00314"
/db_xref="GeneID:5764333"
CDS 307934..309271
/locus_tag="SARI_00314"
/inference="protein motif:BlastProDom:IPR001789"
/inference="protein motif:HMMPfam:IPR001789"
/inference="protein motif:HMMPfam:IPR002078"
/inference="protein motif:HMMSmart:IPR001789"
/inference="protein motif:HMMSmart:IPR003593"
/inference="protein motif:ScanRegExp:IPR002078"
/inference="protein motif:superfamily:IPR011006"
/inference="similar to AA sequence:REFSEQ:NP_461497.1"
/note="'KEGG: eci:UTI89_C2502 1.2e-82 atoC; acetoacetate
metabolism regulatory protein AtoC K07714;
COG: COG2204 Response regulator containing CheY-like
receiver, AAA-type ATPase, and DNA-binding domains;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569395.1"
/db_xref="GI:161502283"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011006"
/db_xref="GeneID:5764333"
/translation="MISRKPAHLLLVDDDPGLLKLLGMRLASEGYSVVTAESGQEGLR
ILNREKVDLVISDLRMDEMDGMQLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVF
SFLTKPIDKDALYKAIDEALEQTAPATDDSWRKPIVTRSPLMLRLLEQAHMVAQSDVS
VLINGQSGTGKEIFAQAIHNASPRSNKPFVAINCGALPEQLLESELFGHARGAFTGAV
SNREGLFQAAEGGTLFLDEIGDMPTPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISA
THRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQSAQRHKPFV
RAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTF
AEARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
misc_feature 307940..309268
/locus_tag="SARI_00314"
/note="response regulator GlrR; Provisional; Region:
PRK15115"
/db_xref="CDD:185070"
misc_feature 307961..308299
/locus_tag="SARI_00314"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature order(307970..307975,308102..308104,308126..308128,
308186..308188,308243..308245,308252..308257)
/locus_tag="SARI_00314"
/note="active site"
/db_xref="CDD:238088"
misc_feature 308102..308104
/locus_tag="SARI_00314"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature order(308111..308116,308120..308128)
/locus_tag="SARI_00314"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature 308252..308260
/locus_tag="SARI_00314"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature 308357..308836
/locus_tag="SARI_00314"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 308426..308449
/locus_tag="SARI_00314"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(308429..308452,308639..308641,308765..308767)
/locus_tag="SARI_00314"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 308627..308644
/locus_tag="SARI_00314"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 308822..308824
/locus_tag="SARI_00314"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene 309348..309686
/locus_tag="SARI_00315"
/db_xref="GeneID:5764334"
CDS 309348..309686
/locus_tag="SARI_00315"
/inference="protein motif:BlastProDom:IPR002187"
/inference="protein motif:FPrintScan:IPR002187"
/inference="protein motif:Gene3D:IPR002187"
/inference="protein motif:HMMPfam:IPR002187"
/inference="protein motif:ScanRegExp:IPR002187"
/inference="protein motif:ScanRegExp:IPR002332"
/inference="similar to AA sequence:INSD:ABB67124.1"
/note="'indirectly regulates nitrogen metabolism; at high
nitrogen levels P-II prevents the phosphorylation of NR-I,
the transcriptional activator of the glutamine synthetase
gene (glnA); at low nitrogen levels P-II is uridylylated
to form PII-UMP and interacts with an adenylyltransferase
(GlnE) that activates GlnA'"
/codon_start=1
/transl_table=11
/product="nitrogen regulatory protein P-II 1"
/protein_id="YP_001569396.1"
/db_xref="GI:161502284"
/db_xref="InterPro:IPR002187"
/db_xref="InterPro:IPR002332"
/db_xref="GeneID:5764334"
/translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
RTGEEDDAAI"
misc_feature 309348..309683
/locus_tag="SARI_00315"
/note="nitrogen regulatory protein P-II 1; Provisional;
Region: PRK10858"
/db_xref="CDD:182784"
misc_feature 309357..309662
/locus_tag="SARI_00315"
/note="Nitrogen regulatory protein P-II; Region: P-II;
smart00938"
/db_xref="CDD:198006"
unsure 309586..309763
/note="Sequence derived from one plasmid subclone"
gene complement(309735..311195)
/locus_tag="SARI_00316"
/db_xref="GeneID:5764335"
CDS complement(309735..311195)
/locus_tag="SARI_00316"
/inference="protein motif:HMMPanther:IPR000109"
/inference="protein motif:HMMPanther:IPR005279"
/inference="protein motif:HMMPfam:IPR000109"
/inference="protein motif:HMMTigr:IPR005279"
/inference="protein motif:ScanRegExp:IPR000109"
/inference="similar to AA sequence:REFSEQ:NP_461495.1"
/note="'COG: COG3104 Dipeptide/tripeptide permease;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569397.1"
/db_xref="GI:161502285"
/db_xref="InterPro:IPR000109"
/db_xref="InterPro:IPR005279"
/db_xref="GeneID:5764335"
/translation="MKTPSQPRAIFYIVAIQIWEYFSFYGMRALLILYLTHQLGFNDS
HAINLFSAYASLVYVTPILGGWLADRLLGNRVAVITGALLMTLGHVVLGLESDSTLSL
YAALAIIICGYGLFKSNISCLLGELYAPDDSRRDGGFSLLYAAGNIGSIAAPIACGLA
AQWYGWHVGFALAGVGMFIGLLIFLSGHRHFQQTRGVNRPALRAVKFALPTWSWLVLM
LCVAPVFFTLLLENNWSGYVLAIVCAFAAQLIARIMVKFPEHRRALWQIVLLMITGTL
FWVLAQQGGSSISLFIDRFVNRQWLHMTVPTALFQSVNAIAVMAAGVMLAWLSSPKES
ARSVLRVWLKFAVGLALMGGGFMLLALNAHQARLDGQASMGMMIAGLAMMGFAELFID
PVAMAQITRLNLPGVTGVLTGIYMLATGAVANWLAGVVAQQTTESQISDTAVAAYGHF
FSQMGEWTLSCVALIVAIVGLRWLCNRTTSALPQGD"
misc_feature complement(309789..311195)
/locus_tag="SARI_00316"
/note="Dipeptide/tripeptide permease [Amino acid transport
and metabolism]; Region: PTR2; COG3104"
/db_xref="CDD:225646"
misc_feature complement(<310641..311168)
/locus_tag="SARI_00316"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(310746..310748,310764..310769,
310776..310781,310821..310823,310830..310835,
310842..310847,310854..310859,311001..311006,
311010..311015,311025..311027,311034..311039,
311046..311048,311100..311105,311109..311117,
311124..311126))
/locus_tag="SARI_00316"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature complement(309927..310973)
/locus_tag="SARI_00316"
/note="POT family; Region: PTR2; pfam00854"
/db_xref="CDD:216153"
gene complement(311251..313395)
/locus_tag="SARI_00317"
/db_xref="GeneID:5764336"
CDS complement(311251..313395)
/locus_tag="SARI_00317"
/inference="protein motif:HMMPfam:IPR000310"
/inference="protein motif:HMMPfam:IPR005308"
/inference="protein motif:HMMPfam:IPR008286"
/inference="protein motif:HMMPIR:IPR011193"
/inference="protein motif:ScanRegExp:IPR000310"
/inference="protein motif:superfamily:IPR008286"
/note="'KEGG: stt:t0297 0. cadA; lysine decarboxylase
K01582;
COG: COG1982 Arginine/lysine/orniTHIne decarboxylases;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569398.1"
/db_xref="GI:161502286"
/db_xref="InterPro:IPR000310"
/db_xref="InterPro:IPR005308"
/db_xref="InterPro:IPR008286"
/db_xref="InterPro:IPR011193"
/db_xref="GeneID:5764336"
/translation="MNVIAIMNHMGVYFKEEPIRELHRALEGLNFRIVYPNDREDLLK
LIENNARLCGVIFDWDKYNLELCEEISKLNEYMPLYAFANSYSTLDVSLNDLRMQVRF
FEYALGAAADIAAKIRQNTDEYIDNILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
SPVGSIFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTN
GTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIP
QSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDYIKKTLDVKSIHFDSAWV
PYTNFSPIYEGKCGMSGDRVEGKIIYETQSTHKLLAAFSQASMIHVKGDINEETFNEA
YMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLKSESDGWF
FDVWQPEHIDGAECWPLRSDSAWHGFKNIDNEHMYLDPIKVTILTPGMKKDGTMDEFG
IPASLVAKYLDERGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTEFKRAFDLNLRV
KNILPALYREAPEFYENMRIQELAQNIHKLVEHHNLPDLMYRAFEVLPKMVMTPYTAF
QKELHGETEEVYLEEMVGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEI
GAHYPGFETDIHGAYRQADGRYTVKVLKENTK"
misc_feature complement(311254..313395)
/locus_tag="SARI_00317"
/note="lysine decarboxylase CadA; Provisional; Region:
PRK15400"
/db_xref="CDD:185298"
misc_feature complement(313024..313356)
/locus_tag="SARI_00317"
/note="Orn/Lys/Arg decarboxylase, N-terminal domain;
Region: OKR_DC_1_N; pfam03709"
/db_xref="CDD:217683"
misc_feature complement(312073..313005)
/locus_tag="SARI_00317"
/note="Ornithine decarboxylase family. This family belongs
to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). The major groups in
this CD corresponds to ornithine decarboxylase (ODC),
arginine decarboxylase (ADC) and lysine...; Region:
Orn_deC_like; cd00615"
/db_xref="CDD:99739"
misc_feature complement(order(312121..312126,312163..312165,
312172..312174,312181..312183,312202..312204,
312208..312216,312220..312225,312274..312288,
312295..312300,312658..312663,312694..312699,
312703..312711,312721..312723,312730..312735,
312739..312747,312820..312822,312844..312846,
312859..312861))
/locus_tag="SARI_00317"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99739"
misc_feature complement(order(312295..312300,312304..312306,
312397..312402,312406..312408,312484..312486,
312655..312657,312661..312663,312733..312741))
/locus_tag="SARI_00317"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99739"
misc_feature complement(312295..312297)
/locus_tag="SARI_00317"
/note="catalytic residue [active]"
/db_xref="CDD:99739"
misc_feature complement(311284..311688)
/locus_tag="SARI_00317"
/note="Orn/Lys/Arg decarboxylase, C-terminal domain;
Region: OKR_DC_1_C; pfam03711"
/db_xref="CDD:112521"
gene complement(313478..314815)
/gene="cadB"
/locus_tag="SARI_00318"
/db_xref="GeneID:5764337"
CDS complement(313478..314815)
/gene="cadB"
/locus_tag="SARI_00318"
/inference="protein motif:HMMPanther:IPR002293"
/inference="protein motif:HMMPfam:IPR004841"
/inference="similar to AA sequence:REFSEQ:NP_461493.1"
/note="antiporter protein responsible for lysine import
and cadaverine export; member of the lysine-dependent acid
resistance system 4 (AR4); inner membrane protein"
/codon_start=1
/transl_table=11
/product="lysine/cadaverine antiporter"
/protein_id="YP_001569399.1"
/db_xref="GI:161502287"
/db_xref="InterPro:IPR002293"
/db_xref="InterPro:IPR004841"
/db_xref="GeneID:5764337"
/translation="MNMSSVKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWG
WVISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAI
GITAVSYLSTFFPALNNPIPAGIACIAIVWLFTFINMLGGAWVSRLTTIGLFLVLIPV
VLTAVAGWHWFDIATYHANWNTSTTTDSHAIVKSILLCLWAFVGVESAAVSTGMVKNP
KRTVPLATMLGTALAGIIYIAATQVIAGMFPASVMASSGAPFAISTSTILGGWAAPLV
SAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKIYGEIDKNGIPKKGLLLAAVKMTA
LMILITIMNSSGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGFNIRNSVSLICS
VLGCAFCFIALMGASSFELSGTFIVSLIILMFYGRKMHQRQNNDSENNTVEAL"
misc_feature complement(313505..314809)
/gene="cadB"
/locus_tag="SARI_00318"
/note="lysine/cadaverine antiporter; Provisional; Region:
cadB; PRK10435"
/db_xref="CDD:182458"
gene complement(315168..316706)
/locus_tag="SARI_00319"
/db_xref="GeneID:5764338"
CDS complement(315168..316706)
/locus_tag="SARI_00319"
/inference="protein motif:BlastProDom:IPR001867"
/inference="protein motif:Gene3D:IPR011990"
/inference="protein motif:Gene3D:IPR011991"
/inference="protein motif:HMMPfam:IPR001867"
/inference="similar to AA sequence:INSD:CAD02760.1"
/note="regulates the cadBA operon"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator CadC"
/protein_id="YP_001569400.1"
/db_xref="GI:161502288"
/db_xref="InterPro:IPR001867"
/db_xref="InterPro:IPR011990"
/db_xref="InterPro:IPR011991"
/db_xref="GeneID:5764338"
/translation="MQQPVVRIGEWLVTPSVNQISRQGRQITLEPRLIDLLMYFAHHP
DEVLSRDNIIDHVWMRTIVTNHVVTQSISELRKSLRDGGDSNAEYIVTVPKRGYKLTA
PVIWCEENSDEIDNASTSPSIASTLTEPTDVIPAAPPAAPPPLQASTKKARRPRIAAF
WTWFMFLLSLATLVVFIVMSVVDHNAAVTKTRLLLNPRDIDVRFEGGNSCNNWLSQES
YAIGLGGLITDLLNTYSTFMVHDKTNYRVNEPSSSGKTLTIQFVNQRHYRAQQCFMSV
VLIDNADGSTMLDKRYFVTNTNQLSIQDDLFNSLSFVLTQPWPDRMREQLALFRTPQN
TALMHFYEARQLILSGDAQALSKASDILNGIIKETPDFKYAYEYKVLVDVLRQSQQPF
DKKRMAALNEEFKEIDQIPGVKKTSVYYKIKTVDLLGKGDIDAAYEEINKSIELEMSW
FNYVLLGKVYEMKGENRLAADAYLTAFNLRPGENTLYWIENGVFQTSVQKIVPYLNSF
LAED"
misc_feature complement(315171..316706)
/locus_tag="SARI_00319"
/note="DNA-binding transcriptional activator CadC;
Provisional; Region: PRK10153"
/db_xref="CDD:236658"
misc_feature complement(316407..316691)
/locus_tag="SARI_00319"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:238225"
misc_feature complement(order(316416..316418,316431..316433,
316470..316475,316497..316499,316506..316508,
316557..316562,316617..316619))
/locus_tag="SARI_00319"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238225"
gene complement(316887..318077)
/locus_tag="SARI_00320"
/db_xref="GeneID:5764339"
CDS complement(316887..318077)
/locus_tag="SARI_00320"
/inference="protein motif:Gene3D:IPR012292"
/inference="protein motif:HMMPfam:IPR000971"
/inference="protein motif:HMMPfam:IPR001433"
/inference="protein motif:HMMPfam:IPR008333"
/inference="protein motif:superfamily:IPR009050"
/inference="similar to AA sequence:INSD:AAV76329.1"
/note="flavohemoprotein; catalyzes the formation of
nitrate from nitric oxide; can also catalyze the reduction
of dihydropteridine"
/codon_start=1
/transl_table=11
/product="nitric oxide dioxygenase"
/protein_id="YP_001569401.1"
/db_xref="GI:161502289"
/db_xref="InterPro:IPR000971"
/db_xref="InterPro:IPR001433"
/db_xref="InterPro:IPR008333"
/db_xref="InterPro:IPR009050"
/db_xref="InterPro:IPR012292"
/db_xref="GeneID:5764339"
/translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN
MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGTHL
LATLDEMFSPGQAVLDAWGKAYGVLANVFINREAEIYHENASKNGGWEGTRPFRIVAK
TPCSALITSFEFEPVDGGTVAEYRPGQYLGVWLKPEGFTHQEIRQYSLTRKPDGKGYR
IAVKREDGGQVSNWLHNHASVGDVVHLAAPAGDFFMNVAADTPVSLISAGVGQTPMLA
MLDTLAKAQHTAQVNWFHAAENGEVHAFADEVRELGRTLPRFTAHTWYREPTETDHAQ
SVFDSEGLMDLRQLEAAIRAPAMQFYLCGPVGFMQFAAKQLISLGVNNENIHYECFGP
HKVL"
misc_feature complement(316890..318077)
/locus_tag="SARI_00320"
/note="bifunctional nitric oxide
dioxygenase/dihydropteridine reductase 2; Provisional;
Region: PRK13289"
/db_xref="CDD:237337"
misc_feature complement(317685..318068)
/locus_tag="SARI_00320"
/note="Globins are heme proteins, which bind and transport
oxygen. This family summarizes a diverse set of homologous
protein domains, including: (1) tetrameric vertebrate
hemoglobins, which are the major protein component of
erythrocytes and transport oxygen...; Region: globin;
cd01040"
/db_xref="CDD:238510"
misc_feature complement(order(317697..317699,317784..317786,
317793..317795,317823..317828,317910..317912,
317919..317921,317949..317954,317961..317963,
317991..317993))
/locus_tag="SARI_00320"
/note="heme-binding site [chemical binding]; other site"
/db_xref="CDD:238510"
misc_feature complement(316899..317639)
/locus_tag="SARI_00320"
/note="FAD_NAD(P)H binding domain of flavohemoglobin.
Flavohemoglobins have a globin domain containing a B-type
heme fused with a ferredoxin reductase-like
FAD/NAD-binding domain. Flavohemoglobins detoxify nitric
oxide (NO) via an NO dioxygenase reaction. The...; Region:
flavohem_like_fad_nad_binding; cd06184"
/db_xref="CDD:99781"
misc_feature complement(order(316908..316910,317262..317264,
317388..317399,317412..317414,317418..317420,
317457..317468,317514..317516))
/locus_tag="SARI_00320"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99781"
misc_feature complement(order(317457..317462,317466..317468))
/locus_tag="SARI_00320"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99781"
misc_feature complement(order(317328..317330,317334..317336,
317358..317360,317379..317381,317388..317390,
317397..317399))
/locus_tag="SARI_00320"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99781"
misc_feature complement(order(317259..317261,317265..317276,
317286..317288))
/locus_tag="SARI_00320"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99781"
misc_feature complement(order(316986..316991,317187..317195,
317268..317273))
/locus_tag="SARI_00320"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99781"
misc_feature complement(316899..316901)
/locus_tag="SARI_00320"
/note="Heme binding pocket [chemical binding]; other
site"
/db_xref="CDD:99781"
gene 318133..318264
/locus_tag="SARI_00321"
/db_xref="GeneID:5764340"
CDS 318133..318264
/locus_tag="SARI_00321"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569402.1"
/db_xref="GI:161502290"
/db_xref="GeneID:5764340"
/translation="MPLNCKWFFAALSCERNNVKNLHHKAEKKSVEIRNAPVQENLI"
unsure 318252..318400
/note="Sequence derived from one plasmid subclone"
gene 318396..319655
/gene="glyA"
/locus_tag="SARI_00322"
/db_xref="GeneID:5764341"
CDS 318396..319655
/gene="glyA"
/locus_tag="SARI_00322"
/inference="protein motif:HMMPanther:IPR001085"
/inference="protein motif:HMMPfam:IPR001085"
/inference="protein motif:HMMPIR:IPR001085"
/inference="protein motif:ScanRegExp:IPR001085"
/inference="similar to AA sequence:INSD:AAX66455.1"
/note="'catalyzes the reaction of glycine with
5,10-methylenetetrahydrofolate to form L-serine and
tetrahydrofolate'"
/codon_start=1
/transl_table=11
/product="serine hydroxymethyltransferase"
/protein_id="YP_001569403.1"
/db_xref="GI:161502291"
/db_xref="InterPro:IPR001085"
/db_xref="GeneID:5764341"
/translation="MRMLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPR
VMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQ
ANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIIPYGIDASGKIDYDDM
AKQAQEHKPKMIIGGFSAYSGVVDWARMREIADSIGAYLFVDMAHVAGLIAAGVYPNP
VPHAHVVTTTTHKTLAGPRGGLILAKGGDEDLYKKLNSAVFPSAQGGPLMHVIAAKAV
ALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKE
ADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVL
DNINDEATIERVKTKVLDICARFPVYA"
misc_feature 318417..319652
/gene="glyA"
/locus_tag="SARI_00322"
/note="serine hydroxymethyltransferase; Reviewed; Region:
glyA; PRK00011"
/db_xref="CDD:234571"
misc_feature 318426..319628
/gene="glyA"
/locus_tag="SARI_00322"
/note="Serine-glycine hydroxymethyltransferase (SHMT).
This family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). SHMT
carries out interconversion of serine and glycine; it
catalyzes the transfer of hydroxymethyl...; Region: SHMT;
cd00378"
/db_xref="CDD:99733"
misc_feature order(318435..318437,318441..318443,318462..318467,
318492..318494,318507..318509,318561..318563,
318615..318620,318642..318644,318687..318689,
318708..318710,318813..318818,319194..319196,
319248..319250)
/gene="glyA"
/locus_tag="SARI_00322"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:99733"
misc_feature order(318504..318506,318564..318566,318594..318596,
318693..318698,318777..318779,318924..318926,
318999..319001,319008..319010,319083..319088,
319104..319106,319488..319490)
/gene="glyA"
/locus_tag="SARI_00322"
/note="glycine-pyridoxal phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99733"
misc_feature order(318504..318506,318777..318779,319086..319088,
319488..319490)
/gene="glyA"
/locus_tag="SARI_00322"
/note="active site"
/db_xref="CDD:99733"
misc_feature order(318570..318572,318591..318593,318762..318764,
318774..318776,318780..318782,319170..319172,
319440..319442)
/gene="glyA"
/locus_tag="SARI_00322"
/note="folate binding site [chemical binding]; other site"
/db_xref="CDD:99733"
gene 319850..320989
/locus_tag="SARI_00323"
/db_xref="GeneID:5764342"
CDS 319850..320989
/locus_tag="SARI_00323"
/inference="protein motif:HMMPfam:IPR011701"
/inference="protein motif:ScanRegExp:IPR001623"
/inference="similar to AA sequence:INSD:AAX66454.1"
/note="putative transporter of 3-phenylpropionate across
the inner membrane; member of the major facilitator
superfamily of transporters"
/codon_start=1
/transl_table=11
/product="putative 3-phenylpropionic acid transporter"
/protein_id="YP_001569404.1"
/db_xref="GI:161502292"
/db_xref="InterPro:IPR001623"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:5764342"
/translation="MALHSTRWLALSYFTYFFSYGIFLPFWSVWLKGLGLTPETIGLL
LGVGLVARFLGSLLIAPRVSNPSRLISALRVLALLTLVFALAFWAGTHVAWLMVVMVG
FNLFFSPLVPLTDALANTWQKQIILDYGRVRLWGSIAFVIGSALTGKLVSLYDYQAIL
ALLTLGVASMLLGMLLRPSVPPQGESRQQEGAGWSAWCILVTQSWRFLACVCLLQGAH
AAYYGFSAIYWQGAGYSASAVGYLWSLGVVAEVIIFALSKKLFRRFSARDLLLLSAVC
GVVRWGLMGWSTTLPWLIVIQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA
MGGSIAIMTVFAGFLYQHLGCGVFWIMALVALPAIFLRPKVVAAS"
misc_feature 319850..320986
/locus_tag="SARI_00323"
/note="putative 3-phenylpropionic acid transporter;
Provisional; Region: PRK11128"
/db_xref="CDD:236856"
misc_feature 319868..>320029
/locus_tag="SARI_00323"
/note="MFS_1 like family; Region: MFS_1_like; pfam12832"
/db_xref="CDD:193307"
gene complement(320984..322261)
/locus_tag="SARI_00324"
/db_xref="GeneID:5764343"
CDS complement(320984..322261)
/locus_tag="SARI_00324"
/inference="protein motif:HMMPfam:IPR011608"
/inference="similar to AA sequence:REFSEQ:NP_461488.1"
/note="'KEGG: spz:M5005_Spy_1664 0.0080 PTS system,
mannitol (cryptic)-specific IIA component K00890;
COG: COG3711 Transcriptional antiterminator;
Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="stationary phase inducible protein CsiE"
/protein_id="YP_001569405.1"
/db_xref="GI:161502293"
/db_xref="InterPro:IPR011608"
/db_xref="GeneID:5764343"
/translation="MMPTIAPPSVLSAPQRRCQILLTLFQPGQIATMEIFSALNGVDD
DIAREDLTETGLEIQRYHRLAITTCQNGCYRIEGTALDQRLCLLHWLRRGLRLCPTFV
TQQFTPALKNALKQRGIARPLYDDINLHALINLCARRLQKPFENRDVQFLRLFLQYCL
LQHHAGITPAFNPVQQIWALSCAEYSLAQEIGRHWQRHVMQAAPLNEALFMALLFSMI
RLPDPIRDTHPRAQKLRLEVARLVLRFREKGNARFSDEQGLNDQLYVHLAQALNRSLF
TIGIDNTLPEEFNRLYPRLVRTTREALAGFEAEYGIRFSDEEKGLVAVIFGAWLMQDN
DLHEKQIVLLTDKNDALETHIEQQLRELTLLPLNIKRVSTLAFQKEGCPRGVALIVTP
YATPLPLFSPPLIHADRALTAHQQQQIRKILES"
misc_feature complement(320987..322261)
/locus_tag="SARI_00324"
/note="stationary phase inducible protein CsiE;
Provisional; Region: PRK11564"
/db_xref="CDD:236932"
misc_feature complement(321611..321874)
/locus_tag="SARI_00324"
/note="PRD domain; Region: PRD; pfam00874"
/db_xref="CDD:201484"
misc_feature complement(321275..321544)
/locus_tag="SARI_00324"
/note="PRD domain; Region: PRD; pfam00874"
/db_xref="CDD:201484"
gene 322387..323025
/locus_tag="SARI_00325"
/db_xref="GeneID:5764344"
CDS 322387..323025
/locus_tag="SARI_00325"
/inference="protein motif:HMMPfam:IPR010412"
/inference="similar to AA sequence:REFSEQ:YP_149645.1"
/note="'COG: COG3683 ABC-type uncharacterized transport
system, periplasmic component;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569406.1"
/db_xref="GI:161502294"
/db_xref="InterPro:IPR010412"
/db_xref="GeneID:5764344"
/translation="MKPVKRSALTLFLAVLSFVAAAHPHSFIRLQTQVVSENQQFVAL
KMRWTMDELTSADLLYDAGSAAPGSEIWKKLAAEVMANVLGQHYFTEAWRNGAKVKFK
NRPTEYGMTRDAHQAVLTFTLPLAEPQPLSGQTYTFSTFDPSYYVDMHYDQDSDVTMP
EPLREKCRIQVHTPAPGEEILRFAQSLDKEDAPPEDMDLGKQFAQTVTLQCQ"
misc_feature 322387..323019
/locus_tag="SARI_00325"
/note="ABC-type uncharacterized transport system,
periplasmic component [General function prediction only];
Region: COG3683"
/db_xref="CDD:226208"
gene 323016..324002
/locus_tag="SARI_00326"
/db_xref="GeneID:5764345"
CDS 323016..324002
/locus_tag="SARI_00326"
/inference="protein motif:HMMPfam:IPR011541"
/inference="similar to AA sequence:REFSEQ:YP_217532.1"
/note="'COG: COG2215 ABC-type uncharacterized transport
system, permease component;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="high-affinity nickel transporter"
/protein_id="YP_001569407.2"
/db_xref="GI:448236190"
/db_xref="InterPro:IPR011541"
/db_xref="GeneID:5764345"
/translation="MSVIFSPHTPVRRWLSLWPLALLLLLMLAGGLWIWQAWPQVMLK
SALWQREVNQQLSALLKAVATHPERAGGSLLVLSFMYGVLHALGPGHGKVVIATWLAT
HPSRLKSSIALTLAAALLQGLLAIGLVVGVLTVLQLPARKLHLSGFWLEKVSYALVGG
LGILLCWRAMKRLRALLRKPGFIAFTPRHVHHEKCGCGHQHLPTREHLHSGDDWRARL
MIVLSMGMRPCSGAIMVLLFSKVIGVFSWGMASVLAMAAGTSLTITSLALLVHTFRAL
AVKLSGNKTPALWRLVGWSTLALAGGIILLIAALVMWFSVPQPVGGLRPWRG"
misc_feature 323121..323876
/locus_tag="SARI_00326"
/note="ABC-type uncharacterized transport system, permease
component [General function prediction only]; Region:
COG2215"
/db_xref="CDD:225125"
gene complement(324003..325037)
/locus_tag="SARI_00327"
/db_xref="GeneID:5764346"
CDS complement(324003..325037)
/locus_tag="SARI_00327"
/inference="protein motif:FPrintScan:IPR006066"
/inference="protein motif:HMMPfam:IPR001450"
/inference="protein motif:HMMPfam:IPR005117"
/inference="protein motif:HMMPfam:IPR006067"
/inference="protein motif:ScanRegExp:IPR001450"
/inference="protein motif:ScanRegExp:IPR006066"
/inference="protein motif:superfamily:IPR011255"
/inference="similar to AA sequence:INSD:AAX66450.1"
/note="'KEGG: stt:t0306 4.8e-180 asrC; anaerobic sulfite
reductase subunit C K00385;
COG: COG2221 Dissimilatory sulfite reductase
(desulfoviridin), alpha and beta subunits;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569408.1"
/db_xref="GI:161502296"
/db_xref="InterPro:IPR001450"
/db_xref="InterPro:IPR005117"
/db_xref="InterPro:IPR006066"
/db_xref="InterPro:IPR006067"
/db_xref="InterPro:IPR011255"
/db_xref="GeneID:5764346"
/translation="MPIKENIMSIDIDIIKARAKNEYRLSKVRGEAMISVRIPGGILP
AHLLTVARDIAETWGNGQIHLTTRQKLAMPGIRYEDIDKVNAALEPFLREIEMELCDV
QVEDTKAGYLAIGGRNIVACQGNRICQKANTDTTGLSRRLEKLVYPSPYHLKTVIVGC
PNDCAKASMADLGIIGVAKMRFTAERCIGCGACMKACSHHAVGCLALKNGKAVKEESA
CIGCGECVLACPTLAWQRKPEQLWQVRLGGRTSKKTPRVGKLFLNWVTEEVIKQVIVN
LYEFEKEMLGGKPIYLHMGHLIDKGGYMRFKERVLRGVQLNPEAMVAERIYWAEDESV
ARMHLKSAGH"
misc_feature complement(324054..325007)
/locus_tag="SARI_00327"
/note="sulfite reductase, subunit C; Region:
sulfite_red_C; TIGR02912"
/db_xref="CDD:131958"
misc_feature complement(324771..324950)
/locus_tag="SARI_00327"
/note="Nitrite/Sulfite reductase ferredoxin-like half
domain; Region: NIR_SIR_ferr; pfam03460"
/db_xref="CDD:217572"
misc_feature complement(<324345..>324491)
/locus_tag="SARI_00327"
/note="The HCP family of iron-sulfur proteins includes
hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
and carbon monoxide dehydrogenase (CODH), all of which
contain [Fe4-S4] metal clusters at their active sites.
These proteins have a conserved...; Region: HCP_like;
cl14655"
/db_xref="CDD:246686"
gene complement(325027..325845)
/locus_tag="SARI_00328"
/db_xref="GeneID:5764347"
CDS complement(325027..325845)
/locus_tag="SARI_00328"
/inference="protein motif:FPrintScan:IPR001221"
/inference="protein motif:HMMPfam:IPR001433"
/inference="protein motif:HMMPfam:IPR008333"
/inference="protein motif:HMMPIR:IPR012165"
/inference="similar to AA sequence:INSD:AAL21443.1"
/note="with AsrAC catalyzes the reduction of sulfite to
hydrogen sulfide"
/codon_start=1
/transl_table=11
/product="anaerobic sulfite reductase subunit B"
/protein_id="YP_001569409.2"
/db_xref="GI:448236191"
/db_xref="InterPro:IPR001221"
/db_xref="InterPro:IPR001433"
/db_xref="InterPro:IPR008333"
/db_xref="InterPro:IPR012165"
/db_xref="GeneID:5764347"
/translation="MSHCSCHDKPQHSLLPAAYRILSITRHTPLEWNFRVEVDFPAHW
GQFVEVSLPRVGEAPISVSDCGNGWIDLLIRNVGKVTSALFTLKEGDNVWLRGCYGNG
YPVNTLRHKPLLVVAGGTGVAPVKGLMRYFVENPQEIGQLDMILGYKNRDCVLYREEM
ATWRGKHNLVLTLDEGEADDRYQIGRVTDRLAELALSDIDTMQAIVVGPPIMITFTVK
MLLQKGLKPEQIWVDYERRMACSVGKCGHCRMGEVYVCTDGPIFNYAVAQRFAD"
misc_feature complement(325030..325818)
/locus_tag="SARI_00328"
/note="anaerobic sulfite reductase subunit B; Provisional;
Region: PRK08221"
/db_xref="CDD:181300"
misc_feature complement(325054..325785)
/locus_tag="SARI_00328"
/note="Anaerobic sulfite reductase contains an FAD and
NADPH binding module with structural similarity to
ferredoxin reductase and sequence similarity to
dihydroorotate dehydrogenases. Clostridium pasteurianum
inducible dissimilatory type sulfite reductase is...;
Region: sulfite_reductase_like; cd06221"
/db_xref="CDD:99817"
misc_feature complement(order(325135..325140,325486..325488,
325603..325611,325621..325629,325663..325674,
325678..325680))
/locus_tag="SARI_00328"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99817"
misc_feature complement(order(325663..325668,325672..325674))
/locus_tag="SARI_00328"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99817"
misc_feature complement(order(325546..325548,325552..325554,
325576..325578,325594..325596,325603..325605,
325612..325614))
/locus_tag="SARI_00328"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99817"
misc_feature complement(order(325474..325476,325480..325491,
325501..325503))
/locus_tag="SARI_00328"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99817"
misc_feature complement(order(325219..325224,325399..325407,
325483..325488))
/locus_tag="SARI_00328"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99817"
misc_feature complement(order(325078..325080,325102..325104,
325111..325113,325126..325128))
/locus_tag="SARI_00328"
/note="Iron coordination center [ion binding]; other site"
/db_xref="CDD:99817"
gene complement(325849..326895)
/locus_tag="SARI_00329"
/db_xref="GeneID:5764348"
CDS complement(325849..326895)
/locus_tag="SARI_00329"
/inference="protein motif:HMMPfam:IPR001450"
/inference="protein motif:ScanRegExp:IPR001450"
/inference="protein motif:superfamily:IPR009051"
/inference="similar to AA sequence:SwissProt:P26474"
/note="'KEGG: cno:NT01CX_0257 5.9e-79 anaerobic sulfite
reductase subunit A K00437;
COG: COG1145 Ferredoxin;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569410.1"
/db_xref="GI:161502298"
/db_xref="InterPro:IPR001450"
/db_xref="InterPro:IPR009051"
/db_xref="GeneID:5764348"
/translation="MMAIKITPDEFSLLIQRLSKQWRVFAPSAEFRGGRFSDTDNIIY
QQISGWRDLIWHEKSHMSPNTIITPITETLFYFDKDTIQIAGTDTSPIVIFARACDIN
AMSRLDYMFLSNGNNSDYSYQLLREHIHFVLIECEESFENCFCVSMGTNKTDRYSAAM
RFSDEGALVSIRDPFIEAAIQGLGQEVDYTPSFVSENRETVVKPDSVCHDPQKIRDIL
TRHPLWDAYDSRCISCGRCTTGCPTCTCYSVFDVAYDENPQRGERRRQWASCMVPGFS
DMAGGHGFREKPGERLRYRALHKVNDYKARNGIEHMCVGCGRCDDRCPQYIKFSLIIN
KMTAAVQQALAEEA"
misc_feature complement(325852..326892)
/locus_tag="SARI_00329"
/note="anaerobic sulfite reductase subunit A; Provisional;
Region: PRK15055"
/db_xref="CDD:237890"
misc_feature complement(326692..326880)
/locus_tag="SARI_00329"
/note="The Death Domain Superfamily of protein-protein
interaction domains; Region: DD_superfamily; cl14633"
/db_xref="CDD:246680"
misc_feature complement(<325855..>325959)
/locus_tag="SARI_00329"
/note="The HCP family of iron-sulfur proteins includes
hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
and carbon monoxide dehydrogenase (CODH), all of which
contain [Fe4-S4] metal clusters at their active sites.
These proteins have a conserved...; Region: HCP_like;
cl14655"
/db_xref="CDD:246686"
gene complement(327116..327910)
/locus_tag="SARI_00330"
/db_xref="GeneID:5764349"
CDS complement(327116..327910)
/locus_tag="SARI_00330"
/inference="protein motif:BlastProDom:IPR000760"
/inference="protein motif:FPrintScan:IPR000760"
/inference="protein motif:HMMPfam:IPR000760"
/inference="protein motif:ScanRegExp:IPR000760"
/inference="similar to AA sequence:SwissProt:P58537"
/note="'KEGG: spt:SPA0320 1.5e-137 suhB; extragenic
suppressor protein SuhB K01092;
COG: COG0483 Archaeal fructose-1,6-bisphosphatase and
related enzymes of inositol monophosphatase family;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="inositol monophosphatase"
/protein_id="YP_001569411.1"
/db_xref="GI:161502299"
/db_xref="InterPro:IPR000760"
/db_xref="GeneID:5764349"
/translation="MLTIAVRAARKAGNVIAKNYETPDAVEASQKGSNDFVTNVDKAA
EAVIIDTIRKSYPQHTIITEESGEHVGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAV
RIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQ
YATTYINIIGKLFTECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVR
EAGGIVSDFTGGHNYLMTGNIVAGNPRVVKAMLANMRDELSDALKR"
misc_feature complement(327146..327910)
/locus_tag="SARI_00330"
/note="Archaeal fructose-1,6-bisphosphatase and related
enzymes of inositol monophosphatase family [Carbohydrate
transport and metabolism]; Region: SuhB; COG0483"
/db_xref="CDD:223559"
misc_feature complement(327182..327910)
/locus_tag="SARI_00330"
/note="IMPase, inositol monophosphatase and related
domains. A family of Mg++ dependent phosphatases,
inhibited by lithium, many of which may act on inositol
monophosphate substrate. They dephosphorylate inositol
phosphate to generate inositol, which may be...; Region:
IMPase; cd01639"
/db_xref="CDD:238817"
misc_feature complement(order(327284..327289,327653..327670,
327716..327721,327788..327790,327806..327808,
327821..327823))
/locus_tag="SARI_00330"
/note="active site"
/db_xref="CDD:238817"
misc_feature complement(order(327317..327328,327338..327340,
327362..327382,327392..327394,327401..327406,
327413..327415,327422..327427,327449..327454,
327458..327460,327464..327472,327626..327643,
327647..327652,327803..327805,327809..327811))
/locus_tag="SARI_00330"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238817"
gene 328038..328766
/locus_tag="SARI_00331"
/db_xref="GeneID:5764350"
CDS 328038..328766
/locus_tag="SARI_00331"
/inference="protein motif:BlastProDom:IPR001537"
/inference="protein motif:HMMPfam:IPR001537"
/inference="protein motif:HMMTigr:IPR004384"
/inference="similar to AA sequence:REFSEQ:NP_457076.1"
/note="'KEGG: stm:STM2545 5.6e-122 putative rRNA methylase
K02533;
COG: COG0565 rRNA methylase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569412.1"
/db_xref="GI:161502300"
/db_xref="InterPro:IPR001537"
/db_xref="InterPro:IPR004384"
/db_xref="GeneID:5764350"
/translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS
QAIALAAGASDVIGNAQIVDTLDEALTGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
EATNTPVALVFGRERVGLTNDELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
LATQENGDAEHEETPYPLVDDLERFYSHLEQTLLSTGFIRENHPGQVMNKLRRLFTRA
RPESLELNILRGMLASIEQQNKGK"
misc_feature 328038..328763
/locus_tag="SARI_00331"
/note="tRNA (cytidine/uridine-2'-O-)-methyltransferase
TrmJ; Provisional; Region: PRK15114"
/db_xref="CDD:185069"
misc_feature 328050..>328508
/locus_tag="SARI_00331"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
cl17307"
/db_xref="CDD:247861"
gene 328982..329476
/locus_tag="SARI_00332"
/db_xref="GeneID:5764351"
CDS 328982..329476
/locus_tag="SARI_00332"
/inference="protein motif:BlastProDom:IPR000944"
/inference="protein motif:HMMPfam:IPR000944"
/inference="protein motif:HMMTigr:IPR000944"
/inference="protein motif:HMMTigr:IPR010242"
/inference="protein motif:ScanRegExp:IPR000944"
/inference="similar to AA sequence:INSD:AAV76341.1"
/note="regulates the expression of the iscRSUA operon"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator IscR"
/protein_id="YP_001569413.1"
/db_xref="GI:161502301"
/db_xref="InterPro:IPR000944"
/db_xref="InterPro:IPR010242"
/db_xref="GeneID:5764351"
/translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
LFSRLRKNGLVSSVRGPGGGYLLGKDAGSIAVGEVISAVDESVDATRCQGKGGCQGGD
KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRANGRVQDAIDV
KLRA"
misc_feature 328982..329473
/locus_tag="SARI_00332"
/note="DNA-binding transcriptional regulator IscR;
Provisional; Region: PRK10857"
/db_xref="CDD:236777"
misc_feature 328982..329374
/locus_tag="SARI_00332"
/note="Rrf2 family protein; Region: rrf2_super; TIGR00738"
/db_xref="CDD:129821"
gene 329657..330871
/locus_tag="SARI_00333"
/db_xref="GeneID:5764352"
CDS 329657..330871
/locus_tag="SARI_00333"
/inference="protein motif:HMMPfam:IPR000192"
/inference="protein motif:HMMTigr:IPR010240"
/inference="protein motif:ScanRegExp:IPR000192"
/inference="similar to AA sequence:REFSEQ:YP_149654.1"
/note="catalyzes the removal of elemental sulfur from
cysteine to produce alanine; involved in NAD biosynthesis"
/codon_start=1
/transl_table=11
/product="cysteine desulfurase"
/protein_id="YP_001569414.1"
/db_xref="GI:161502302"
/db_xref="InterPro:IPR000192"
/db_xref="InterPro:IPR010240"
/db_xref="GeneID:5764352"
/translation="MKLPIYLDYSATTPVDPRVAEKMMQFLTLDGTFGNPASRSHRFG
WQAEEAVDIARNQIAELVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
EHKAVLDTCRQLEREGFEVTYLAPQSNGIIDLKALEAAMRDDTILVSIMHVNNEIGVV
QDIATIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
RRKPRIRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMETEMARLRGLRNR
LWNGIKDIEEVYLNGDLEQGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE
PSYVLRALGMNDELAHSSIRFSLGRFTTEEEIDYTIDLVRKSIGRLRDLSPLWEMYKQ
GVDLNSIEWAHH"
misc_feature 329657..330868
/locus_tag="SARI_00333"
/note="cysteine desulfurase; Provisional; Region:
PRK14012"
/db_xref="CDD:184450"
misc_feature 329669..330814
/locus_tag="SARI_00333"
/note="cysteine desulfurase NifS; Region: FeS_nifS;
TIGR03402"
/db_xref="CDD:132443"
misc_feature order(329879..329884,329891..329893,330110..330112,
330194..330196,330203..330205,330263..330265,
330272..330274)
/locus_tag="SARI_00333"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99742"
misc_feature 330272..330274
/locus_tag="SARI_00333"
/note="catalytic residue [active]"
/db_xref="CDD:99742"
gene 330899..331285
/locus_tag="SARI_00334"
/db_xref="GeneID:5764353"
CDS 330899..331285
/locus_tag="SARI_00334"
/inference="protein motif:HMMPfam:IPR002871"
/inference="protein motif:HMMTigr:IPR011339"
/inference="similar to AA sequence:REFSEQ:YP_149655.1"
/note="'KEGG: rxy:Rxyl_1354 9.8e-16 tRNA
(5-methylaminomethyl-2-THIouridylate)-methyltransferase
K00566;
COG: COG0822 NifU homolog involved in Fe-S cluster
formation;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="scaffold protein"
/protein_id="YP_001569415.1"
/db_xref="GI:161502303"
/db_xref="InterPro:IPR002871"
/db_xref="InterPro:IPR011339"
/db_xref="GeneID:5764353"
/translation="MAYSEKVIDHYENPRNVGSFDNNDDNVGSGMVGAPACGDVMKLQ
IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIADELELPPV
KIHCSILAEDAIKAAIADYKSKREAK"
misc_feature 330899..331276
/locus_tag="SARI_00334"
/note="NifU homolog involved in Fe-S cluster formation
[Energy production and conversion]; Region: IscU; COG0822"
/db_xref="CDD:223892"
misc_feature 330905..331249
/locus_tag="SARI_00334"
/note="Iron-sulfur cluster scaffold-like proteins; Region:
IscU_like; cd06664"
/db_xref="CDD:143480"
misc_feature order(330905..330913,330920..330925,331007..331012,
331085..331087,331091..331093,331202..331207,
331211..331216)
/locus_tag="SARI_00334"
/note="trimerization site [polypeptide binding]; other
site"
/db_xref="CDD:143480"
misc_feature order(331007..331009,331085..331087,331214..331216)
/locus_tag="SARI_00334"
/note="active site"
/db_xref="CDD:143480"
gene 331314..331637
/gene="iscA"
/locus_tag="SARI_00335"
/db_xref="GeneID:5764354"
CDS 331314..331637
/gene="iscA"
/locus_tag="SARI_00335"
/inference="protein motif:BlastProDom:IPR000361"
/inference="protein motif:HMMPanther:IPR000361"
/inference="protein motif:HMMPfam:IPR000361"
/inference="protein motif:HMMTigr:IPR000361"
/inference="protein motif:HMMTigr:IPR011302"
/inference="protein motif:ScanRegExp:IPR000361"
/inference="similar to AA sequence:SwissProt:Q8XFZ8"
/note="forms iron-sulfur clusters of ferredoxin [2FE-2S];
binds iron in the presence of the thioredoxin reductase
system; forms homodimers and tetramers; similar to SufA
protein"
/codon_start=1
/transl_table=11
/product="iron-sulfur cluster assembly protein"
/protein_id="YP_001569416.1"
/db_xref="GI:161502304"
/db_xref="InterPro:IPR000361"
/db_xref="InterPro:IPR011302"
/db_xref="GeneID:5764354"
/translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
VDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCG
ESFHV"
misc_feature 331314..331634
/gene="iscA"
/locus_tag="SARI_00335"
/note="iron-sulfur cluster assembly protein; Provisional;
Region: iscA; PRK09502"
/db_xref="CDD:181914"
gene 331904..332419
/gene="hscB"
/locus_tag="SARI_00336"
/db_xref="GeneID:5764355"
CDS 331904..332419
/gene="hscB"
/locus_tag="SARI_00336"
/inference="protein motif:HMMPfam:IPR001623"
/inference="protein motif:HMMPfam:IPR012895"
/inference="protein motif:HMMSmart:IPR001623"
/inference="protein motif:HMMTigr:IPR004640"
/inference="protein motif:superfamily:IPR001623"
/inference="protein motif:superfamily:IPR009073"
/inference="similar to AA sequence:INSD:AAL21434.1"
/note="J-type co-chaperone that regulates the ATPase and
peptide-binding activity of Hsc66 chaperone; may function
in biogenesis of iron-sulfur proteins"
/codon_start=1
/transl_table=11
/product="co-chaperone HscB"
/protein_id="YP_001569417.1"
/db_xref="GI:161502305"
/db_xref="InterPro:IPR001623"
/db_xref="InterPro:IPR004640"
/db_xref="InterPro:IPR009073"
/db_xref="InterPro:IPR012895"
/db_xref="GeneID:5764355"
/translation="MDYFTLFGLPASYHIDTQALSLRFQDLQRQYHPDKFANGTQAQH
LAAVQQSATINQAWQTLRHPLTRAEYLLSLHGFDLASEQHTVRDTAFLMEQLTLREEL
DDIEQTKDDARLESFIKRVQKMFDTRLQQMVTQLDNAAWGEAADTVRKLRFLDKLRSS
ADQLEEKLLDF"
misc_feature 331904..332413
/gene="hscB"
/locus_tag="SARI_00336"
/note="co-chaperone HscB; Provisional; Region: hscB;
PRK05014"
/db_xref="CDD:179914"
misc_feature 331907..332086
/gene="hscB"
/locus_tag="SARI_00336"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of Hsp70s; Region: DnaJ;
cd06257"
/db_xref="CDD:99751"
misc_feature order(331997..332005,332030..332032,332054..332059,
332066..332071)
/gene="hscB"
/locus_tag="SARI_00336"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
misc_feature 332159..332392
/gene="hscB"
/locus_tag="SARI_00336"
/note="HSCB C-terminal oligomerisation domain; Region:
HSCB_C; pfam07743"
/db_xref="CDD:219548"
gene 332432..334282
/gene="hscA"
/locus_tag="SARI_00337"
/db_xref="GeneID:5764356"
CDS 332432..334282
/gene="hscA"
/locus_tag="SARI_00337"
/inference="protein motif:BlastProDom:IPR013126"
/inference="protein motif:FPrintScan:IPR001023"
/inference="protein motif:HMMPanther:IPR001023"
/inference="protein motif:HMMPfam:IPR013126"
/inference="protein motif:HMMTigr:IPR010236"
/inference="protein motif:ScanRegExp:IPR013126"
/note="involved in the maturation of iron-sulfur
cluster-containing proteins"
/codon_start=1
/transl_table=11
/product="chaperone protein HscA"
/protein_id="YP_001569418.1"
/db_xref="GI:161502306"
/db_xref="InterPro:IPR001023"
/db_xref="InterPro:IPR010236"
/db_xref="InterPro:IPR013126"
/db_xref="GeneID:5764356"
/translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
PDHEGRHLLPSVVHYQQQGHTVGYAARDNAAQDTANTISSVKRMMGRSLADIQSRYPH
LPYRFQASENGLPMIETAAGLLNPVRVSADILKALAARASESLSGELDGVVITVPAYF
DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGKEGVIAVYDLGGGTFDISIL
RLSCGVFEVLATGGDSALGGDDFDHLLADYIREQAGIADRSDNRVQRELLDAAIAAKI
ALSDADTVRVNVAGWQGEITREQFNDLIAALVKRTLLACRRALKDADVDPQEVLEVVM
VGGSTRVPLVRERVGEFFGRTPLTAIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI
PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELAQDCRS
LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGIEASIQVKPSYGLTDSE
IASMIKDSMSFAEQDVKARMLAEQKVEAARVLESLTGALTADAALLSAAERQCIDDAA
AHLNAVAQGDDVDAIEQAIKNVDKQTQEFAARRMDQSVRRALKGHSVDEV"
misc_feature 332432..334279
/gene="hscA"
/locus_tag="SARI_00337"
/note="chaperone protein HscA; Provisional; Region: hscA;
PRK05183"
/db_xref="CDD:235360"
misc_feature 332489..333556
/gene="hscA"
/locus_tag="SARI_00337"
/note="Nucleotide-binding domain of HscA and similar
proteins; Region: HscA_like_NBD; cd10236"
/db_xref="CDD:212678"
misc_feature order(332504..332506,332510..332521,332687..332689,
332900..332902,332984..332986,333050..333067,
333071..333073,333143..333148,333245..333247,
333254..333259,333437..333445,333449..333454,
333518..333520)
/gene="hscA"
/locus_tag="SARI_00337"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212678"
misc_feature order(332573..332575,332621..332623,332633..332635,
332642..332647,332858..332863,333215..333217,
333224..333229,333236..333238,333248..333250,
333284..333286,333290..333295)
/gene="hscA"
/locus_tag="SARI_00337"
/note="putative NEF/HSP70 interaction site [polypeptide
binding]; other site"
/db_xref="CDD:212678"
misc_feature order(332915..332920,332924..332929,332972..332977,
332981..332983,333104..333115)
/gene="hscA"
/locus_tag="SARI_00337"
/note="SBD interface [polypeptide binding]; other site"
/db_xref="CDD:212678"
gene 334284..334619
/locus_tag="SARI_00338"
/db_xref="GeneID:5764357"
CDS 334284..334619
/locus_tag="SARI_00338"
/inference="protein motif:Gene3D:IPR012675"
/inference="protein motif:HMMPfam:IPR001041"
/inference="protein motif:HMMTigr:IPR011536"
/inference="protein motif:ScanRegExp:IPR001055"
/inference="protein motif:superfamily:IPR001041"
/inference="similar to AA sequence:INSD:AAO68042.1"
/note="'KEGG: eci:UTI89_C2847 2.2e-56 fdx; ferredoxin,
2Fe-2S K04755;
COG: COG0633 Ferredoxin;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569419.1"
/db_xref="GI:161502307"
/db_xref="InterPro:IPR001041"
/db_xref="InterPro:IPR001055"
/db_xref="InterPro:IPR011536"
/db_xref="InterPro:IPR012675"
/db_xref="GeneID:5764357"
/translation="MPKIVILPHQDLCPDGAVLEAQTGETILDVALRNGIEIEHACEK
SCACTTCHCIVREGFDSLPESSEEEDDMLDKAWGLEPESRLSCQARVTDDDLVIEIPR
YTINHAREH"
misc_feature 334284..334595
/locus_tag="SARI_00338"
/note="Ferredoxin [Energy production and conversion];
Region: Fdx; COG0633"
/db_xref="CDD:223706"
misc_feature 334323..334580
/locus_tag="SARI_00338"
/note="2Fe-2S iron-sulfur cluster binding domain.
Iron-sulfur proteins play an important role in electron
transfer processes and in various enzymatic reactions. The
family includes plant and algal ferredoxins, which act as
electron carriers in photosynthesis...; Region: fer2;
cd00207"
/db_xref="CDD:238126"
misc_feature order(334395..334400,334407..334409,334416..334418,
334425..334436,334539..334544)
/locus_tag="SARI_00338"
/note="catalytic loop [active]"
/db_xref="CDD:238126"
misc_feature order(334407..334409,334425..334427,334434..334436,
334542..334544)
/locus_tag="SARI_00338"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:238126"
gene 334631..334831
/locus_tag="SARI_00339"
/db_xref="GeneID:5764358"
CDS 334631..334831
/locus_tag="SARI_00339"
/inference="protein motif:HMMPfam:IPR007479"
/inference="similar to AA sequence:REFSEQ:NP_457068.1"
/note="'COG: COG2975 Uncharacterized protein conserved in
bacteria;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569420.1"
/db_xref="GI:161502308"
/db_xref="InterPro:IPR007479"
/db_xref="GeneID:5764358"
/translation="MGLKWTDSREIGEALYDAYPDVDPKTVRFTDLHQWICELDDFDD
DPNASNEKILEAILLVWLDEAE"
misc_feature 334631..334828
/locus_tag="SARI_00339"
/note="hypothetical protein; Provisional; Region:
PRK10721"
/db_xref="CDD:170660"
gene 335080..336363
/locus_tag="SARI_00340"
/db_xref="GeneID:5764359"
CDS 335080..336363
/locus_tag="SARI_00340"
/inference="protein motif:HMMPfam:IPR000819"
/inference="protein motif:HMMPIR:IPR008330"
/inference="protein motif:ScanRegExp:IPR000819"
/inference="similar to AA sequence:INSD:AAL21430.1"
/note="catalyzes the removal of an N-terminal amino acid
from a peptide or arylamide"
/codon_start=1
/transl_table=11
/product="aminopeptidase B"
/protein_id="YP_001569421.1"
/db_xref="GI:161502309"
/db_xref="InterPro:IPR000819"
/db_xref="InterPro:IPR008330"
/db_xref="GeneID:5764359"
/translation="MTEAMNITLSTQPADARWGDKATYSINNDGITLHLNGNDDLGLI
QRAARKIDGLGIKQVALTGEGWDIERCWAFWAGYKGPKGVRTVMWPDLDDAQRQELDN
RLTIIDWVRDTINAPAEELGPEQLAQRAVDLLCSVACDHVTYRITKGEDLREQNYMGL
HTVGRGSERSPVLLALDYNPTGDKDAPVYACLVGKGITFDSGGYSIKQSAFMDSMKSD
MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIIRYRNGKNVEVMNT
DAEGRLVLADGLIDASAQHPQLIIDMATLTGAAKTALGNDYHALFSFDDTLAGRLLSS
AAQENEPFWRLPLAEFHRNQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYREGW
LHIDCSATYRKAPVEQWAAGATGLGVRTIANLLTA"
misc_feature 335092..336360
/locus_tag="SARI_00340"
/note="aminopeptidase B; Provisional; Region: PRK05015"
/db_xref="CDD:235330"
misc_feature 335092..335322
/locus_tag="SARI_00340"
/note="Peptidase; Region: DUF3663; pfam12404"
/db_xref="CDD:152839"
misc_feature 335218..336354
/locus_tag="SARI_00340"
/note="Cytosol aminopeptidase family, N-terminal and
catalytic domains. Family M17 contains zinc- and
manganese-dependent exopeptidases ( EC 3.4.11.1),
including leucine aminopeptidase. They catalyze removal of
amino acids from the N-terminus of a protein and...;
Region: Peptidase_M17; cd00433"
/db_xref="CDD:238247"
misc_feature order(335422..335424,335428..335436,335575..335577,
335581..335583,335674..335676,335692..335694,
335707..335709,335716..335718,335725..335730,
335824..335826,335830..335841,335845..335847,
335851..335865,335881..335883,335887..335889,
335899..335901,336007..336021,336028..336030,
336106..336111,336115..336117,336130..336132,
336136..336141,336154..336156,336160..336162,
336193..336198,336202..336204,336310..336312)
/locus_tag="SARI_00340"
/note="interface (dimer of trimers) [polypeptide binding];
other site"
/db_xref="CDD:238247"
misc_feature order(335662..335664,335677..335679,335698..335700,
335731..335733,335908..335910,335914..335916,
335920..335922,335992..335994)
/locus_tag="SARI_00340"
/note="Substrate-binding/catalytic site; other site"
/db_xref="CDD:238247"
misc_feature order(335662..335664,335677..335679,335731..335733,
335908..335910,335914..335916)
/locus_tag="SARI_00340"
/note="Zn-binding sites [ion binding]; other site"
/db_xref="CDD:238247"
gene 336470..337246
/locus_tag="SARI_00341"
/db_xref="GeneID:5764360"
CDS 336470..337246
/locus_tag="SARI_00341"
/inference="protein motif:HMMPfam:IPR009839"
/inference="similar to AA sequence:REFSEQ:YP_217517.1"
/note="enhances serine sensitivity caused by inhibition of
homoserine dehydrogenase I"
/codon_start=1
/transl_table=11
/product="enhanced serine sensitivity protein SseB"
/protein_id="YP_001569422.1"
/db_xref="GI:161502310"
/db_xref="InterPro:IPR009839"
/db_xref="GeneID:5764360"
/translation="MSEIKNELEILLEKAATEPAHRPAFFRTLLESTVWVPGSAAEGE
AIVEDSALDLQHWEKEDGTTVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETL
FLNAKLPTGKEFMPREISLLLGEEGSPLSTQEVLEGGESLILSEVAEPPSQMIDSLTT
LFKTIKPVKRAFLCAIKEHADAQPNLLIGIEADGDIEEIIHAAGNVATDTLPGDEPID
ICQVRKGEQGISHFITEHIAPFYERRWGGFLRDFKQNRII"
misc_feature 336512..337237
/locus_tag="SARI_00341"
/note="enhanced serine sensitivity protein SseB;
Provisional; Region: PRK11611"
/db_xref="CDD:183229"
gene complement(337250..337545)
/locus_tag="SARI_00342"
/db_xref="GeneID:5764361"
misc_RNA complement(337250..337545)
/locus_tag="SARI_00342"
/product="RyfA RNA"
/inference="nucleotide motif:Rfam:RF00126"
/note="Rfam score 323.14"
/db_xref="GeneID:5764361"
gene 337629..337835
/locus_tag="SARI_00343"
/db_xref="GeneID:5764362"
CDS 337629..337835
/locus_tag="SARI_00343"
/note="'Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569423.1"
/db_xref="GI:161502311"
/db_xref="GeneID:5764362"
/translation="MVCLRCYGNKACWKGREPDQHKKTAQLSGFFVACLNRIYVDSFQ
ISLNCRPDKRERHPAWQILSGFNR"
gene complement(337815..338669)
/gene="sseA"
/locus_tag="SARI_00344"
/db_xref="GeneID:5764363"
CDS complement(337815..338669)
/gene="sseA"
/locus_tag="SARI_00344"
/inference="protein motif:HMMPfam:IPR001763"
/inference="protein motif:HMMSmart:IPR001763"
/inference="protein motif:ScanRegExp:IPR001307"
/inference="similar to AA sequence:REFSEQ:NP_457064.1"
/note="catalyzes the transfer of a sulfur ion to cyanide
or to other thiol compounds"
/codon_start=1
/transl_table=11
/product="3-mercaptopyruvate sulfurtransferase"
/protein_id="YP_001569424.1"
/db_xref="GI:161502312"
/db_xref="InterPro:IPR001307"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:5764363"
/translation="MEMPMTTAYFVAADWLAEHIDDPEIQILDARMAPPGQEHRDMAG
EYRAGHIPGALFFDIEALSDHASPLPHMMPRPEAFAVAMRELGVRQDKHLVIYDEGNL
FSAPRAWWMLRTFGAEKVSILAGGLAGWQRDEWLLREGDEAHEEGEFEAKFTPQAVVR
LTDVLLASHEKTAQIVDARPAARFNAQADEPRPGLRRGHIPGALNVPWTELVFEGELK
TTDELNEVFFSHGVSFDRPIIASCGSGVTAAVVVLALATLDVPDVTLYDGAWSEWGAR
TDLPVEPA"
misc_feature complement(337818..338657)
/gene="sseA"
/locus_tag="SARI_00344"
/note="3-mercaptopyruvate sulfurtransferase; Provisional;
Region: sseA; PRK11493"
/db_xref="CDD:236917"
misc_feature complement(338274..338642)
/gene="sseA"
/locus_tag="SARI_00344"
/note="Thiosulfate sulfurtransferase (TST), N-terminal,
inactive domain. TST contains 2 copies of the Rhodanese
Homology Domain; this is the 1st repeat, which does not
contain the catalytically active Cys residue. The role of
the 1st repeat is uncertain, but it...; Region:
TST_Repeat_1; cd01448"
/db_xref="CDD:238725"
misc_feature complement(338376..338378)
/gene="sseA"
/locus_tag="SARI_00344"
/note="active site residue [active]"
/db_xref="CDD:238725"
misc_feature complement(337845..338183)
/gene="sseA"
/locus_tag="SARI_00344"
/note="Thiosulfate sulfurtransferase (TST), C-terminal,
catalytic domain. TST contains 2 copies of the Rhodanese
Homology Domain; this is the second repeat. Only the
second repeat contains the catalytically active Cys
residue; Region: TST_Repeat_2; cd01449"
/db_xref="CDD:238726"
misc_feature complement(337944..337946)
/gene="sseA"
/locus_tag="SARI_00344"
/note="active site residue [active]"
/db_xref="CDD:238726"
gene 338866..343800
/locus_tag="SARI_00345"
/db_xref="GeneID:5764364"
CDS 338866..343800
/locus_tag="SARI_00345"
/inference="protein motif:HMMPfam:IPR002890"
/inference="protein motif:HMMPfam:IPR011625"
/inference="protein motif:superfamily:IPR008930"
/note="'COG: COG2373 Large extracellular alpha-helical
protein;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569425.1"
/db_xref="GI:161502313"
/db_xref="InterPro:IPR002890"
/db_xref="InterPro:IPR008930"
/db_xref="InterPro:IPR011625"
/db_xref="GeneID:5764364"
/translation="MKHLRVVACIIMLALAGCDNNDKIAPTTKNETSAAAQSSPAKDP
AQLQKLAQQSQGKALTLLDASEAQLDGAATLVLTFSIPLDPEQDFSRVIHIVDKKSGS
VDGAWELAPNLKELRLRHLEPKRVLVVTVDPAVKALNNATFGTPYEKTITTRDVQPSV
GFASRGSLLPGKIAEGLPVMALNVNHVDVNFFRVKPESLAAFVSQWEYRSSLSNWESD
NLLKMADLVYTGRFDLNPARNTREKLLLPLSDIKPLQQAGVYVAVMNQAGHYNYSNAA
TLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQSGIEIVLLNDKGQTLAQSTSDAQGHV
QLESDKAAALLLARKAGQTTLLDLKLPALDLSEFNVAGAPGYSKQFFMFGPRDLYRPG
ETVILNGLLRDSDGKTLPDQPVKLEVVKPDGQVMRTVVSQPENGLYRLNYPLDSRAPT
GLWHVRANTGDNVLRTWDFHVEDFMPERMALNLTAQKTPLAPADAVKFSVVGYYLYGA
PASGNALQGQLFLRPQRDAVAALPGFQFGNIAEENLSRSLDEVQLSLDKSGRGDVIAA
SQWQETHSPLQVILQASLLESGGRPVTRRVEQAIWPADTLPGIRPQFTAKAVYDYRTD
ATVNQPIVDEDSNAAFDIVYANAQGEKKAVSGLQVRLIRERRDYYWNWSESEGWQSQF
DQKDLVEGEQTLDLNADETGKVSFPVEWGAYRLEVKAPNETVSSVRFWAGYSWQDNSD
GSGAARPDRVTLKLDKANYRPGDTMKLHIAAPVAGKGYAMVESSDGPLWWQAIDVPAQ
GLDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGLLHLPLGDENRRLDLALE
SPAKMRPNQPLTVRVKASVKHGEMPKQINVLVSAVDSGVLNITDYATPDPWQAFFGQK
RYGADIYDIYGQVIEGQGRLAALRFGGDGDALKRGGKPPVNHVNIIAQQAQPITLNEQ
GEGVVTLPIGDFNGELRVMAQAWTADDFGRGESKVVVAAPVIAELNMPRFLAGGDVSR
LVLDVTNLTDRPQTLNIALAASGLLELLSQQPQPVNLAPGVRTTLFVPVRALEGFGEG
ELQATMSGLNLPGETLDAQHKQWKISVRPAWPGQTVNSGIALAPGESWHVPAQHLANV
SPATLQGQLLLSGKPPLNLARYIRELKAYPYGCLEQTASGLFPALYTNAAQLQALGIV
GDSDEKRRAAVDIGISRVLQMQRDNGGFALWDKNGAEEYWLTAYAMDFLVRAGEQGYS
VPPEAINQGNERLLRYLQDPGMMLIRYSDNTQASTFAAQAYAALVLARQQKAPLGALR
EIWERRSQAASGLPLMQLGIALKTMGDARRGEEAITLALNTPRQDERQWIADYGSSLR
DNALMLSLLEENNLKPDAQNALLSSLSEQAFGQRWLSTQENNALFLAAHSRQASAGAW
QAQTSLEAQPLSGDKALTRNLDADQLSALEVTNAGSQPLWLRLDSSGYPSSAPEPASN
VLQIERQILGTDGQRKSLSSLRSGELVLVWLTVVADRNVPDALVVDLLPAGLELENQN
LADSSASLPESGSEVQNLLNQMQQADIQHMEFRDDRFVAAVAVNEGQPVTLVYLARAV
TPGTYQLPQPQVESMYVPQWRATGASEGLLIVTP"
misc_feature 338866..343797
/locus_tag="SARI_00345"
/note="Large extracellular alpha-helical protein [General
function prediction only]; Region: COG2373"
/db_xref="CDD:225248"
misc_feature 340003..340278
/locus_tag="SARI_00345"
/note="MG2 domain; Region: A2M_N; pfam01835"
/db_xref="CDD:216731"
misc_feature 342358..343143
/locus_tag="SARI_00345"
/note="Proteins similar to alpha2-macroglobulin (alpha
(2)-M). Alpha (2)-M is a major carrier protein in serum.
It is a broadly specific proteinase inhibitor. The
structural thioester of alpha (2)-M, is involved in the
immobilization and entrapment of...; Region: A2M_like;
cd02891"
/db_xref="CDD:239221"
misc_feature order(342400..342402,342406..342411,342418..342420,
342538..342540,342568..342570,342577..342579,
343102..343104)
/locus_tag="SARI_00345"
/note="surface patch; other site"
/db_xref="CDD:239221"
misc_feature 342400..342411
/locus_tag="SARI_00345"
/note="thioester region; other site"
/db_xref="CDD:239221"
misc_feature order(342700..342702,342712..342714)
/locus_tag="SARI_00345"
/note="specificity defining residues; other site"
/db_xref="CDD:239221"
gene 343801..346116
/locus_tag="SARI_00346"
/db_xref="GeneID:5764365"
CDS 343801..346116
/locus_tag="SARI_00346"
/inference="protein motif:BlastProDom:IPR001264"
/inference="protein motif:HMMPfam:IPR001264"
/inference="protein motif:HMMPfam:IPR001460"
/inference="protein motif:HMMPfam:IPR009647"
/inference="protein motif:HMMTigr:IPR011815"
/inference="protein motif:superfamily:IPR012338"
/note="penicillin-insensitive
transglycosylase/transpeptidase"
/codon_start=1
/transl_table=11
/product="penicillin-binding protein 1C"
/protein_id="YP_001569426.1"
/db_xref="GI:161502314"
/db_xref="InterPro:IPR001264"
/db_xref="InterPro:IPR001460"
/db_xref="InterPro:IPR009647"
/db_xref="InterPro:IPR011815"
/db_xref="InterPro:IPR012338"
/db_xref="GeneID:5764365"
/translation="MNGWRGKRGRWLWLAGAPLFILLALWAADNLWPLPLNEVHPARV
VVAHDGTPLWRFADAGGIWRYPVTIEEVSPRYLEALINYEDRWFWRHPGVNPFSVARA
AWQDLTAGRVISGGSTLTMQVARLLDPHPRTFGGKIRQLWRALQLEWHLSKRDILTLY
LNRAPFGGTLQGIGAASWAYFGKSPARLSYADAALLAVLPQAPSRLRPDRWPARAEAA
RNKVLDRMAAQGVWPAETVRESREEPVWLAPRQMPQLAPLFARMMLSKSQSDKIVTTL
DAGLQRQLEDLARVWKGRLPARSSLAMIVVDHTDMSVRGWVGSVDLNDDSRFGHVDMV
TAIRSPGSVLKPFVYGLALDDALIHPASLLQDVPRRTGDYRPGNFDSGFHGPVSMSDA
LVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPAGAAPNLSLILGGAGARLDEMAA
AYSAFARHGKAAKLRLQPDDPLWERSLMSPGAAWIIRRIMADEAQPLPDNALPRIVPL
AWKTGTSYGYRDAWAIGVNARYIIGIWTGRPDGTPVVGQIGFASAVPLLNQVNNLLLA
HAGRLPEDPRPQSVSRGVICWPGGQSLPAGDSNCRRRLATWLLDDSQPPTLLLPEQEG
INGIRFPVWLDDTGLRVAADCPQAREHTFIVWPRPLELWLPSTERRSARLPAESALCP
PLQGRNTAPLMLSGVREGAVIRQLPGQENITLPVFTTGGKGRRWWFLNGEPVNSANNS
LSLLLNIAGRYQLVVMDESGQVAAVNFELMR"
misc_feature 343810..346107
/locus_tag="SARI_00346"
/note="penicillin-binding protein 1C; Provisional; Region:
PRK11240"
/db_xref="CDD:183049"
misc_feature 343945..344481
/locus_tag="SARI_00346"
/note="Transglycosylase; Region: Transgly; pfam00912"
/db_xref="CDD:201501"
misc_feature 344710..345405
/locus_tag="SARI_00346"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; cl17760"
/db_xref="CDD:248314"
misc_feature 345841..346101
/locus_tag="SARI_00346"
/note="Penicillin-Binding Protein C-terminus Family;
Region: BiPBP_C; pfam06832"
/db_xref="CDD:219195"
gene 346279..348657
/locus_tag="SARI_00347"
/db_xref="GeneID:5764366"
CDS 346279..348657
/locus_tag="SARI_00347"
/inference="protein motif:HMMPfam:IPR006656"
/inference="protein motif:HMMPfam:IPR006657"
/inference="protein motif:HMMPfam:IPR006963"
/inference="protein motif:HMMTigr:IPR011888"
/inference="protein motif:ScanRegExp:IPR006655"
/inference="protein motif:superfamily:IPR009010"
/note="'KEGG: dsy:DSY0357 3.7e-237 dmsA; putative
anaerobic DMSO reductase chain A precursor K00369;
COG: COG0243 Anaerobic dehydrogenases, typically
selenocysteine-containing;
Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569427.1"
/db_xref="GI:161502315"
/db_xref="InterPro:IPR006655"
/db_xref="InterPro:IPR006656"
/db_xref="InterPro:IPR006657"
/db_xref="InterPro:IPR006963"
/db_xref="InterPro:IPR009010"
/db_xref="InterPro:IPR011888"
/db_xref="GeneID:5764366"
/translation="MKKITCQGNSEQPAISRRNFIQASSALIALPFVSSTATAQARAV
TATENRPAEKVVQTCSTFDCGGKCDIRVHVNEGIVTRISTRPDNALDAQMPVMRACVR
GRAYRKFVYHPDRLKYPMKRVGKRGEGKFERISWDEATTLIAANLKSITAKYGPASRY
VHVGTAVSGGTFSGDKMVRRLLNLTGGYLESYHSVSMGNTAAATPYTYGTAASGSSLD
TLLETKLVILWGHNPTETIFGHTNYFFQKMKQNGTRFIVVDPRYSDTVASLADQWIPL
LPTTDNALMDAMMYVIISENLHDRAFIERYAIGFDEGSMPEGVPANESLVAYLTGAKD
GVVKSPEWAEKITHVPAQTIRQLARDYANTKPAALIQGWGPQRHNCGERTARGSTLLA
TITGNVGIKGGWAAGYGGCANRKFAAGPEMPDNPVKAKISVMNWVQAADDASKVTPDV
GLKDADKLESNIRILFSLAGNYLANQNPDLHQAVRVLEDESRIQFIVASDLFMTPSAK
YADLLLPETSFMERWNIGETWGTASYLILSEKLIEPEFERRSDYDWLREVAAKLDIEN
EFSQGRDEKAWIEHIWEQTRLAMPDENLPDFATLRKTRQHLFKSAPSVAFEDNIRDPD
NHPFPTPSGKIEIFSKRLFDMQHPEIPALSHYVPAHEGPEDALAKDFPLQLITWKGKN
RANSTQYANPWLIEVQHQKLWINPQDAQKRGIKHGDMVRIHNQRGICEIPAEVTPRII
PGVVAMQAGAWWQPDENGIDKGGCANVLSSARITALAKGNSHQTMLVEVAKA"
misc_feature 346321..348654
/locus_tag="SARI_00347"
/note="anaerobic dimethyl sulfoxide reductase, A subunit,
DmsA/YnfE family; Region: dmsA_ynfE; TIGR02166"
/db_xref="CDD:233756"
misc_feature 346447..348267
/locus_tag="SARI_00347"
/note="This CD (MopB_DmsA-EC) includes the DmsA enzyme of
the dmsABC operon encoding the anaerobic dimethylsulfoxide
reductase (DMSOR) of Escherichia coli and other related
DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
group has a predicted...; Region: MopB_DmsA-EC; cd02770"
/db_xref="CDD:239171"
misc_feature order(346456..346458,346468..346470,346480..346482,
346576..346578)
/locus_tag="SARI_00347"
/note="putative [Fe4-S4] binding site [ion binding]; other
site"
/db_xref="CDD:239171"
misc_feature order(346864..346866,346966..346968,346981..346986,
347050..347058,347110..347115,347119..347121,
347395..347400,347407..347409,347683..347685,
347689..347691,347701..347703,347707..347709,
347773..347778,347788..347790,347842..347844,
347929..347931)
/locus_tag="SARI_00347"
/note="putative molybdopterin cofactor binding site
[chemical binding]; other site"
/db_xref="CDD:239171"
misc_feature 348289..348651
/locus_tag="SARI_00347"
/note="The MopB_CT_DmsA-EC CD includes the DmsA enzyme of
the dmsABC operon encoding the anaerobic dimethylsulfoxide
reductase (DMSOR) of Escherichia coli and other related
DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this
group has a predicted...; Region: MopB_CT_DmsA-EC;
cd02794"
/db_xref="CDD:239195"
misc_feature order(348307..348309,348313..348318,348325..348327,
348331..348339,348520..348522,348574..348576,
348622..348627)
/locus_tag="SARI_00347"
/note="putative molybdopterin cofactor binding site; other
site"
/db_xref="CDD:239195"
gene 348654..349283
/locus_tag="SARI_00348"
/db_xref="GeneID:5764367"
CDS 348654..349283
/locus_tag="SARI_00348"
/inference="protein motif:HMMPfam:IPR001450"
/inference="protein motif:ScanRegExp:IPR001450"
/inference="similar to AA sequence:REFSEQ:NP_461464.1"
/note="'KEGG: dsy:DSY0356 6.8e-62 dmsB; putative anaerobic
DMSO reductase chain B iron-sulfur subunit K00369;
COG: COG0437 Fe-S-cluster-containing hydrogenase
components 1;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569428.1"
/db_xref="GI:161502316"
/db_xref="InterPro:IPR001450"
/db_xref="GeneID:5764367"
/translation="MSQFTHYPPVSDKQLGFFIDSSRCSGCKACQVACKDKNNLEVGR
RFRRVYEVNGGNFIPTGQGGVSNNVFAYTLSISCNHCADPICTKNCPTTAMHKRPGDG
IVRVDTDKCVGCGYCAWSCPYGAPQLNDQTGQMSKCDMCVDLQAKGEQPVCVATCPLE
AIKFGPIDELRAKYGSVCDVNGLPDSSITKPNLVVKAHHGAEKEGKRHA"
misc_feature 348693..349178
/locus_tag="SARI_00348"
/note="DMSO reductase, iron-sulfur subunit; Region:
DMSO_dmsB; TIGR02951"
/db_xref="CDD:131996"
misc_feature 348963..349028
/locus_tag="SARI_00348"
/note="4Fe-4S binding domain; Region: Fer4; pfam00037"
/db_xref="CDD:215671"
gene 349276..350085
/locus_tag="SARI_00349"
/db_xref="GeneID:5764368"
CDS 349276..350085
/locus_tag="SARI_00349"
/inference="protein motif:HMMPfam:IPR007059"
/inference="similar to AA sequence:REFSEQ:NP_457060.1"
/note="'KEGG: dsy:DSY4822 9.4e-33 dmsC; putative anaerobic
DMSO reductase chain C anchor subunit K00369;
COG: COG3302 DMSO reductase anchor subunit;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569429.1"
/db_xref="GI:161502317"
/db_xref="InterPro:IPR007059"
/db_xref="GeneID:5764368"
/translation="MHELPLLIFTLCLQGSVGVTLWLALGRQYAVEGREPVRGALPAM
AGAFVLACVGLLASALHMGYPLNALNALRHVASSWLSREIVFASLYLAALGLGVVLLF
FRKPGWQPLLALAAALGLVDVFCMAQIYIHASVATWQHSNTLALFFGTSGIIGSLVIA
LVYLRNAGAAMRCAVVVVALMVLIRLIMQPLWLADINALDTTVVTLPHHPLQALAQLR
DVYLLGWCVSAAGMACFAAGGLRNARGALAAGSVLLLIGEIVLRYVFFSIG"
misc_feature 349276..350082
/locus_tag="SARI_00349"
/note="DMSO reductase anchor subunit [General function
prediction only]; Region: DmsC; COG3302"
/db_xref="CDD:225839"
gene 350085..350948
/locus_tag="SARI_00350"
/db_xref="GeneID:5764369"
CDS 350085..350948
/locus_tag="SARI_00350"
/inference="protein motif:HMMPfam:IPR001450"
/inference="protein motif:ScanRegExp:IPR001450"
/inference="similar to AA sequence:INSD:CAD02730.1"
/note="'KEGG: mth:MTH926 1.5e-08 tungsten
formylmethanofuran dehydrogenase, subunit F homolog
K00205;
COG: COG1145 Ferredoxin;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="putative polyferredoxin"
/protein_id="YP_001569430.1"
/db_xref="GI:161502318"
/db_xref="InterPro:IPR001450"
/db_xref="GeneID:5764369"
/translation="MVNLASDPAIDVTQACVRRRFRFSSCRACADVCPAQAFLLTQGQ
ASIDMARCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSLQAPTVDELLLWHSQ
YGIRFIDIAVERSAQWLMALAGLNLALRRYGEPCWSFKHVVGTEINVSRRTLFHVPRD
TITPCAVEPGKRRLRQAFSAFSECVPEISLEACRMCGACWRSCPENVIQFADDTLTIT
AARCTGCGGCAAVCPHQALRLRFDMEPAQTRHIAAHTLTCESCKRTFQALTPEHTRCV
LCQHHDFAMRL"
misc_feature 350223..350288
/locus_tag="SARI_00350"
/note="4Fe-4S binding domain; Region: Fer4; pfam00037"
/db_xref="CDD:215671"
gene complement(350975..351106)
/locus_tag="SARI_00352"
/db_xref="GeneID:5764370"
CDS complement(350975..351106)
/locus_tag="SARI_00352"
/note="'Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569431.1"
/db_xref="GI:161502320"
/db_xref="GeneID:5764370"
/translation="MGLMMEKVRSIAMFTSEKCSVVMSGADYKEHPSNCLWMQVTFF"
gene 351069..351500
/gene="ndk"
/locus_tag="SARI_00351"
/db_xref="GeneID:5764372"
CDS 351069..351500
/gene="ndk"
/locus_tag="SARI_00351"
/inference="protein motif:BlastProDom:IPR001564"
/inference="protein motif:FPrintScan:IPR001564"
/inference="protein motif:Gene3D:IPR001564"
/inference="protein motif:HMMPfam:IPR001564"
/inference="protein motif:HMMPIR:IPR012005"
/inference="protein motif:HMMSmart:IPR001564"
/inference="protein motif:ScanRegExp:IPR001564"
/inference="protein motif:superfamily:IPR001564"
/inference="similar to AA sequence:INSD:AAV76358.1"
/note="catalyzes the formation of nucleoside triphosphate
from ATP and nucleoside diphosphate"
/codon_start=1
/transl_table=11
/product="nucleoside diphosphate kinase"
/protein_id="YP_001569432.1"
/db_xref="GI:161502319"
/db_xref="InterPro:IPR001564"
/db_xref="InterPro:IPR012005"
/db_xref="GeneID:5764372"
/translation="MAIERTFSIIKPNAVAKNVIGSIFARFEAAGFRIVGTRMLHLTV
EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGT
LRADYADSFTENGTHGSDSLESAQREIAFFFGEGEVCPRTR"
misc_feature 351078..351467
/gene="ndk"
/locus_tag="SARI_00351"
/note="Nucleoside diphosphate kinase Group I
(NDPk_I)-like: NDP kinase domains are present in a large
family of structurally and functionally conserved proteins
from bacteria to humans that generally catalyze the
transfer of gamma-phosphates of a nucleoside...; Region:
NDPk_I; cd04413"
/db_xref="CDD:239876"
misc_feature order(351099..351101,351219..351221,351243..351245,
351327..351329,351345..351347,351378..351380,
351408..351410,351417..351419,351423..351428,
351450..351452)
/gene="ndk"
/locus_tag="SARI_00351"
/note="active site"
/db_xref="CDD:239876"
misc_feature order(351111..351113,351126..351134,351141..351143,
351150..351152,351177..351185)
/gene="ndk"
/locus_tag="SARI_00351"
/note="multimer interface [polypeptide binding]; other
site"
/db_xref="CDD:239876"
gene 351669..352835
/locus_tag="SARI_00353"
/db_xref="GeneID:5764371"
CDS 351669..352835
/locus_tag="SARI_00353"
/inference="protein motif:HMMPfam:IPR007197"
/inference="protein motif:HMMTigr:IPR004383"
/inference="protein motif:superfamily:IPR009063"
/inference="similar to AA sequence:INSD:CAD02728.1"
/note="23S rRNA m2A2503 methyltransferase; methylates the
C2 position of the A2530 nucleotide in 23S rRNA; may be
involved in antibiotic resistance"
/codon_start=1
/transl_table=11
/product="ribosomal RNA large subunit methyltransferase N"
/protein_id="YP_001569433.1"
/db_xref="GI:161502321"
/db_xref="InterPro:IPR004383"
/db_xref="InterPro:IPR007197"
/db_xref="InterPro:IPR009063"
/db_xref="GeneID:5764371"
/translation="MSEQIVTPESSTPVVSNNEAKINLLDLNRQQMREFFKNLGEKPF
RADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIA
VGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAA
KIVGAAKVTGQRPITNVVMMGMGEPLLNLTNVVPAMEIMLDDFGFGLSKRRVTLSTSG
VVPALDKLGDMIDVALAISLHAPNDAIRDEIVPINKKYNIETFLGAVRRYLEKSNANQ
GRVTIEYVMLDHVNDGTEHAHQLAELLKETPCKINLIPWNPFPGAPYGRSSNSRIDRF
SKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAI"
misc_feature 351720..352832
/locus_tag="SARI_00353"
/note="ribosomal RNA large subunit methyltransferase N;
Provisional; Region: PRK11194"
/db_xref="CDD:183031"
misc_feature 352050..352652
/locus_tag="SARI_00353"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature order(352053..352055,352059..352061,352065..352067,
352071..352079,352209..352211,352215..352220,
352311..352319,352377..352379,352509..352511,
352608..352613)
/locus_tag="SARI_00353"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene 353128..354093
/locus_tag="SARI_00354"
/db_xref="GeneID:5764373"
CDS 353128..354093
/locus_tag="SARI_00354"
/inference="protein motif:HMMPfam:IPR001387"
/inference="protein motif:HMMSmart:IPR001387"
/inference="protein motif:superfamily:IPR010982"
/inference="similar to AA sequence:REFSEQ:NP_457056.1"
/note="'KEGG: bca:BCE_1379 0.0056 odhB; dihydrolipoamide
acetyltransferase K00658;
COG: COG1426 Uncharacterized protein conserved in
bacteria;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="cytoskeletal protein RodZ"
/protein_id="YP_001569434.1"
/db_xref="GI:161502322"
/db_xref="InterPro:IPR001387"
/db_xref="InterPro:IPR010982"
/db_xref="GeneID:5764373"
/translation="MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTV
RDIEEDKAPSDLASTFLRGYIRSYARLVHVPEEELLPGLEKQAPLRAAKVAPMQNFSL
GKRRKKRDGWLMSFTWLVLFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDS
GQGVQLDTRAAASQDTTPAETAPAAPVDSTAAATQNTVVAPSQANVDTAATSATATET
SSALPTDQAGVAAPAADSNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQA
PYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTINAEPTSAQ"
misc_feature 353128..354075
/locus_tag="SARI_00354"
/note="cytoskeletal protein RodZ; Provisional; Region:
PRK10856"
/db_xref="CDD:236776"
misc_feature 353173..353364
/locus_tag="SARI_00354"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:238045"
misc_feature order(353185..353187,353197..353199,353272..353274)
/locus_tag="SARI_00354"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238045"
misc_feature order(353194..353196,353269..353271)
/locus_tag="SARI_00354"
/note="salt bridge; other site"
/db_xref="CDD:238045"
misc_feature order(353215..353220,353251..353253,353260..353262,
353272..353277)
/locus_tag="SARI_00354"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
misc_feature 353842..354069
/locus_tag="SARI_00354"
/note="Domain of unknown function (DUF4115); Region:
DUF4115; pfam13464"
/db_xref="CDD:222149"
gene 354120..355238
/gene="ispG"
/locus_tag="SARI_00355"
/db_xref="GeneID:5764374"
CDS 354120..355238
/gene="ispG"
/locus_tag="SARI_00355"
/inference="protein motif:HMMPfam:IPR004588"
/inference="protein motif:HMMTigr:IPR004588"
/inference="similar to AA sequence:INSD:AAV76361.1"
/note="'catalyzes the conversion of 2C-methyl-D-erythritol
2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl
diphosphate; involved in isoprenoid synthesis'"
/codon_start=1
/transl_table=11
/product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase"
/protein_id="YP_001569435.1"
/db_xref="GI:161502323"
/db_xref="InterPro:IPR004588"
/db_xref="GeneID:5764374"
/translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPITVQSMTNTRTTDVEAT
VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGV
DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
AMRHVDHLDRLNFEQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRARGINFIACPTCSRQ
EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
RKDRLDNDDMIAQLESRIRAKASQLDEARRIDVLQVEK"
misc_feature 354120..355196
/gene="ispG"
/locus_tag="SARI_00355"
/note="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase; Reviewed; Region: ispG; PRK00366"
/db_xref="CDD:234737"
misc_feature 354144..>354887
/gene="ispG"
/locus_tag="SARI_00355"
/note="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase; Validated; Region: PRK00694"
/db_xref="CDD:234812"
misc_feature <354864..355106
/gene="ispG"
/locus_tag="SARI_00355"
/note="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase; Validated; Region: PRK00694"
/db_xref="CDD:234812"
gene 355238..355329
/locus_tag="SARI_00356"
/db_xref="GeneID:5764375"
misc_RNA 355238..355329
/locus_tag="SARI_00356"
/product="SroE RNA"
/inference="nucleotide motif:Rfam:RF00371"
/note="Rfam score 104.62"
/db_xref="GeneID:5764375"
gene 355349..356623
/gene="hisS"
/locus_tag="SARI_00357"
/db_xref="GeneID:5764376"
CDS 355349..356623
/gene="hisS"
/locus_tag="SARI_00357"
/inference="protein motif:Gene3D:IPR004154"
/inference="protein motif:HMMPfam:IPR002314"
/inference="protein motif:HMMPfam:IPR004154"
/inference="protein motif:HMMPIR:IPR004516"
/inference="protein motif:HMMTigr:IPR004516"
/inference="protein motif:superfamily:IPR004154"
/inference="similar to AA sequence:SwissProt:O52765"
/note="'catalyzes a two-step reaction, first charging a
histidine molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA
synthetase; forms homodimers; some organisms have a
paralogous gene, hisZ, that is similar to hisS and
produces a protein that performs the first step in
histidine biosynthesis along with HisG'"
/codon_start=1
/transl_table=11
/product="histidyl-tRNA synthetase"
/protein_id="YP_001569436.1"
/db_xref="GI:161502324"
/db_xref="InterPro:IPR002314"
/db_xref="InterPro:IPR004154"
/db_xref="InterPro:IPR004516"
/db_xref="GeneID:5764376"
/translation="MAKNIQAIRGMNDYLPGETAIWQRIESTLKNVLGSYGYSEIRLP
IVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
QRLWYIGPMFRHERPQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEH
VSLELNSIGSLEARANYRDALVAFLEQHQETLDEDCKRRMYTNPLRVLDSKNPDVQAL
LNDAPALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFIASPVVDIYLV
AAGTETQSAAMTLAERLRDEMPDVKLITNHGGGNFKKQFARADKWGARIALVLGESEV
ANGTVVVKDLRSGEQTAVAQDSVAAHLRTLLG"
misc_feature 355358..356620
/gene="hisS"
/locus_tag="SARI_00357"
/note="histidyl-tRNA synthetase; Reviewed; Region: hisS;
PRK00037"
/db_xref="CDD:234586"
misc_feature 355400..356299
/gene="hisS"
/locus_tag="SARI_00357"
/note="Class II Histidinyl-tRNA synthetase (HisRS)-like
catalytic core domain. HisRS is a homodimer. It is
responsible for the attachment of histidine to the 3' OH
group of ribose of the appropriate tRNA. This domain is
primarily responsible for...; Region: HisRS-like_core;
cd00773"
/db_xref="CDD:238396"
misc_feature order(355415..355417,355451..355453,355466..355486,
355556..355561,355595..355597,355601..355603,
355616..355621,355628..355633,355715..355720,
355739..355741,355763..355765,355775..355777,
355784..355786,356204..356206,356258..356263)
/gene="hisS"
/locus_tag="SARI_00357"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238396"
misc_feature 355460..355486
/gene="hisS"
/locus_tag="SARI_00357"
/note="motif 1; other site"
/db_xref="CDD:238396"
misc_feature order(355595..355597,355601..355603,355685..355687,
355691..355693,355712..355714,355721..355723,
355727..355729,355739..355741,356123..356125,
356129..356131,356135..356140,356189..356191,
356204..356206,356261..356263,356270..356272,
356279..356281)
/gene="hisS"
/locus_tag="SARI_00357"
/note="active site"
/db_xref="CDD:238396"
misc_feature 355682..355696
/gene="hisS"
/locus_tag="SARI_00357"
/note="motif 2; other site"
/db_xref="CDD:238396"
misc_feature order(356258..356272,356279..356281)
/gene="hisS"
/locus_tag="SARI_00357"
/note="motif 3; other site"
/db_xref="CDD:238396"
misc_feature 356330..356608
/gene="hisS"
/locus_tag="SARI_00357"
/note="HisRS Histidyl-anticodon binding domain. HisRS
belongs to class II aminoacyl-tRNA synthetases (aaRS).
This alignment contains the anticodon binding domain,
which is responsible for specificity in tRNA-binding, so
that the activated amino acid is...; Region:
HisRS_anticodon; cd00859"
/db_xref="CDD:238436"
misc_feature order(356354..356359,356468..356470,356486..356488,
356510..356512,356540..356542,356546..356548)
/gene="hisS"
/locus_tag="SARI_00357"
/note="anticodon binding site; other site"
/db_xref="CDD:238436"
gene 356637..357257
/locus_tag="SARI_00358"
/db_xref="GeneID:5764377"
CDS 356637..357257
/locus_tag="SARI_00358"
/inference="protein motif:Gene3D:IPR011990"
/inference="similar to AA sequence:INSD:AAL21415.1"
/note="'COG: COG2976 Uncharacterized protein conserved in
bacteria;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569437.1"
/db_xref="GI:161502325"
/db_xref="InterPro:IPR011990"
/db_xref="GeneID:5764377"
/translation="MEIYENEHDQVDAIKRFFAENGKALAVGVILGVGALVGWRYWNS
HQTESARAASLAYQNAVTAISADKPDSIPAAEKFAAENKNTYGALASMELAQQFVDKN
ELKKAETQLQQGLAATSDENLKAVINLRLARVQVQLKQADAALKTLDAIKGEGWTAIV
ADLRGEALLSKGDIKGARSAWEAGVNSDASPALSEMMQMKINNLSI"
misc_feature 356637..357254
/locus_tag="SARI_00358"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG2976"
/db_xref="CDD:225523"
misc_feature 356664..356786
/locus_tag="SARI_00358"
/note="Uncharacterized protein conserved in bacteria
(DUF2133); Region: DUF2133; pfam09976"
/db_xref="CDD:204361"
gene 357268..358446
/locus_tag="SARI_00359"
/db_xref="GeneID:5764378"
CDS 357268..358446
/locus_tag="SARI_00359"
/inference="protein motif:HMMPfam:IPR002372"
/inference="protein motif:HMMSmart:IPR002372"
/inference="protein motif:superfamily:IPR011047"
/inference="similar to AA sequence:INSD:AAO68059.1"
/note="'with YaeT, YfiO, and NlpB forms a complex involved
in outer membrane protein biogenesis'"
/codon_start=1
/transl_table=11
/product="outer membrane protein assembly complex subunit
YfgL"
/protein_id="YP_001569438.1"
/db_xref="GI:161502326"
/db_xref="InterPro:IPR002372"
/db_xref="InterPro:IPR011047"
/db_xref="GeneID:5764378"
/translation="MQLRKLLLPGLLSVTLLSGCSLFSGEEDVVKMSPLPQVENQFTP
TTAWSTSVGNGIGDFYSNLHPVMADNVVYAASRAGVVKALNADDGKEIWSVNLGEKDG
WFSRSSALLSGGVTVAGGHVYIGSEKALVYALNTSDGTTEWQTKVAGEALSRPVVSDG
LVLIHTSNGQLQALNQADGAIKWTVSLDMPSLSLRGESAPATAFGAAIVGGDNGRVSA
VLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQ
IMWKRELGSVNDFIVDGDRIYLVDQNDRVLALTTDGGVTLWTQSDLLHRLLTSPVLYN
GDLVVGDSEGYLHWINVDDGRFVAQQKVDSSGFLTEPTVADGKLLIQAKDGTVYAITR
"
misc_feature 357268..358443
/locus_tag="SARI_00359"
/note="outer membrane biogenesis protein BamB;
Provisional; Region: PRK11138"
/db_xref="CDD:236857"
misc_feature 357358..358443
/locus_tag="SARI_00359"
/note="Beta-barrel assembly machinery (Bam) complex
component B and related proteins; Region: BamB_YfgL;
cd10276"
/db_xref="CDD:199834"
misc_feature order(357394..357402,357409..357411,357514..357516,
357520..357522,357529..357537,357544..357546,
357664..357666,357670..357672,357679..357687,
357694..357696,357784..357786,357790..357792,
357799..357807,357814..357816,357919..357921,
357925..357927,357934..357942,357949..357951,
358072..358074,358078..358080,358087..358095,
358102..358104,358186..358188,358192..358194,
358201..358209,358216..358218,358309..358311,
358315..358317,358324..358332,358339..358341,
358432..358434,358438..358440)
/locus_tag="SARI_00359"
/note="Trp docking motif [polypeptide binding]; other
site"
/db_xref="CDD:199834"
gene 358521..360035
/gene="engA"
/locus_tag="SARI_00360"
/db_xref="GeneID:5764379"
CDS 358521..360035
/gene="engA"
/locus_tag="SARI_00360"
/inference="protein motif:HMMPfam:IPR002917"
/inference="protein motif:HMMTigr:IPR005225"
/inference="protein motif:HMMTigr:IPR005289"
/inference="similar to AA sequence:INSD:AAV76365.1"
/note="EngA; essential Neisserial GTPase; synchronizes
cellular events by interacting with multiple targets with
tandem G-domains; overexpression in Escherichia coli
suppresses rrmJ mutation; structural analysis of the
Thermotoga maritima ortholog shows different nucleotide
binding affinities in the two binding domains"
/codon_start=1
/transl_table=11
/product="GTP-binding protein EngA"
/protein_id="YP_001569439.1"
/db_xref="GI:161502327"
/db_xref="InterPro:IPR002917"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR005289"
/db_xref="GeneID:5764379"
/translation="MRALSDDFLNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALV
ADFPGLTRDRKYGRAEVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFM
VDARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGDIYPIAAS
HGRGVLSLLEHVLLPWMDDIAPQEEVDEDAEYWAQFEAEENSEEAPEDDFNPQDLPIK
LAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRK
RGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVV
NKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRR
VSTALLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKR
YLMNYFRKSLEVMGTPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKSK"
misc_feature 358569..359948
/gene="engA"
/locus_tag="SARI_00360"
/note="GTP-binding protein Der; Reviewed; Region:
PRK00093"
/db_xref="CDD:234628"
misc_feature 358578..359039
/gene="engA"
/locus_tag="SARI_00360"
/note="EngA1 GTPase contains the first domain of EngA;
Region: EngA1; cd01894"
/db_xref="CDD:206681"
misc_feature 358587..358610
/gene="engA"
/locus_tag="SARI_00360"
/note="G1 box; other site"
/db_xref="CDD:206681"
misc_feature order(358596..358598,358602..358613,358914..358919,
358923..358925,358992..359000)
/gene="engA"
/locus_tag="SARI_00360"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206681"
misc_feature order(358641..358661,358671..358682)
/gene="engA"
/locus_tag="SARI_00360"
/note="Switch I region; other site"
/db_xref="CDD:206681"
misc_feature 358671..358673
/gene="engA"
/locus_tag="SARI_00360"
/note="G2 box; other site"
/db_xref="CDD:206681"
misc_feature order(358725..358742,358803..358808)
/gene="engA"
/locus_tag="SARI_00360"
/note="Switch II region; other site"
/db_xref="CDD:206681"
misc_feature 358728..358739
/gene="engA"
/locus_tag="SARI_00360"
/note="G3 box; other site"
/db_xref="CDD:206681"
misc_feature 358914..358925
/gene="engA"
/locus_tag="SARI_00360"
/note="G4 box; other site"
/db_xref="CDD:206681"
misc_feature 358992..359000
/gene="engA"
/locus_tag="SARI_00360"
/note="G5 box; other site"
/db_xref="CDD:206681"
misc_feature 359166..359678
/gene="engA"
/locus_tag="SARI_00360"
/note="EngA2 GTPase contains the second domain of EngA;
Region: EngA2; cd01895"
/db_xref="CDD:206682"
misc_feature 359187..359210
/gene="engA"
/locus_tag="SARI_00360"
/note="G1 box; other site"
/db_xref="CDD:206682"
misc_feature order(359196..359198,359202..359213,359523..359528,
359532..359534,359622..359630)
/gene="engA"
/locus_tag="SARI_00360"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206682"
misc_feature order(359232..359234,359241..359282)
/gene="engA"
/locus_tag="SARI_00360"
/note="Switch I region; other site"
/db_xref="CDD:206682"
misc_feature 359271..359273
/gene="engA"
/locus_tag="SARI_00360"
/note="G2 box; other site"
/db_xref="CDD:206682"
misc_feature 359328..359339
/gene="engA"
/locus_tag="SARI_00360"
/note="G3 box; other site"
/db_xref="CDD:206682"
misc_feature order(359337..359342,359412..359417)
/gene="engA"
/locus_tag="SARI_00360"
/note="Switch II region; other site"
/db_xref="CDD:206682"
misc_feature 359523..359534
/gene="engA"
/locus_tag="SARI_00360"
/note="G4 box; other site"
/db_xref="CDD:206682"
misc_feature 359622..359630
/gene="engA"
/locus_tag="SARI_00360"
/note="G5 box; other site"
/db_xref="CDD:206682"
gene 360097..360345
/locus_tag="SARI_00361"
/db_xref="GeneID:5764380"
CDS 360097..360345
/locus_tag="SARI_00361"
/inference="protein motif:HMMPfam:IPR010807"
/inference="similar to AA sequence:INSD:AAP83330.1"
/note="'KEGG: aha:AHA_1764 6.9e-14 ubiquitin ligase sinat5
K01932;
COG: NOG17950 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569440.1"
/db_xref="GI:161502328"
/db_xref="InterPro:IPR010807"
/db_xref="GeneID:5764380"
/translation="MDYALEENVVEITCPVCHRALERNGNAAHCATCVKDFVLQAICP
DCRQPLQVLKACGAVDYFCQNGHGLVSKKRVNFVISEQ"
misc_feature 360127..360336
/locus_tag="SARI_00361"
/note="Protein of unknown function (DUF1407); Region:
DUF1407; pfam07191"
/db_xref="CDD:148664"
gene complement(360622..360972)
/locus_tag="SARI_00362"
/db_xref="GeneID:5764381"
CDS complement(360622..360972)
/locus_tag="SARI_00362"
/inference="similar to AA sequence:REFSEQ:ZP_01536042.1"
/note="'COG: NOG18711 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569441.1"
/db_xref="GI:161502329"
/db_xref="GeneID:5764381"
/translation="MDIPELTDDAIVELAREGGVAFIPKLNKQRKIALAPLTASQRQR
VSDILKQTLPVGSPPGQVNSPGKGDQRYFRIHIIWTQHQQAQYTDIVILVPENDAPSS
LVELWQKGEACICD"
gene complement(360973..362058)
/locus_tag="SARI_00363"
/db_xref="GeneID:5764382"
CDS complement(360973..362058)
/locus_tag="SARI_00363"
/inference="protein motif:Gene3D:IPR013832"
/inference="protein motif:Gene3D:IPR013856"
/inference="protein motif:HMMPfam:IPR001570"
/inference="protein motif:HMMPfam:IPR013856"
/inference="protein motif:ScanRegExp:IPR006025"
/inference="similar to AA sequence:INSD:ABK56826.1"
/note="'KEGG: eca:ECA3211 1.1e-123 prt1; extracellular
metalloprotease;
COG: COG3227 Zinc metalloprotease (elastase);
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569442.1"
/db_xref="GI:161502330"
/db_xref="InterPro:IPR001570"
/db_xref="InterPro:IPR006025"
/db_xref="InterPro:IPR013832"
/db_xref="InterPro:IPR013856"
/db_xref="GeneID:5764382"
/translation="MLTIYTTDVLFSVVRNKEIGMNTISCHTVIPPYILRRIIANGSA
PQQRCARLTLTHVQTLMAHKPVKSPVAHPAHPGRLERDIYDAKQGQELPGLQVRHEGQ
PSNGDIAVDEAYNYLGITHDFFWKIYHRDSLDNKGLALTGTVHYGRDYQNAFWNGQQM
VFGDGDGEIFNRFTSSIDVVAHELTHGVTETEAGLIYFGQSGALNESLSDVLGSLVKQ
FHLQQTAGQADWIIGEGLLAKGINGKGLRSMAAPGTAYDDPLLGQDPQPAHMQNFIKT
REDNGGVHLNSGIPNRAFYLAACQIGGYAWEKAGYAWYDTLCDRNLAQNASFADFAGL
TIAHGEKRSGQTVASAIEQAWKTVGVL"
misc_feature complement(360976..>361833)
/locus_tag="SARI_00363"
/note="Zinc metalloprotease (elastase) [Amino acid
transport and metabolism]; Region: LasB; COG3227"
/db_xref="CDD:225768"
misc_feature complement(360979..361818)
/locus_tag="SARI_00363"
/note="Peptidase M4 family includes thermolysin,
protealysin, aureolysin and neutral protease; Region:
M4_neutral_protease; cd09597"
/db_xref="CDD:189004"
misc_feature complement(order(361207..361209,361318..361323,
361441..361443,361468..361470,361501..361503,
361510..361515,361522..361524,361600..361605))
/locus_tag="SARI_00363"
/note="active site"
/db_xref="CDD:189004"
misc_feature complement(order(361441..361443,361501..361503,
361513..361515))
/locus_tag="SARI_00363"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:189004"
gene complement(362076..363440)
/gene="xseA"
/locus_tag="SARI_00364"
/db_xref="GeneID:5764383"
CDS complement(362076..363440)
/gene="xseA"
/locus_tag="SARI_00364"
/inference="protein motif:HMMPfam:IPR003753"
/inference="protein motif:HMMPfam:IPR004365"
/inference="protein motif:HMMTigr:IPR003753"
/inference="protein motif:superfamily:IPR008994"
/inference="similar to AA sequence:SwissProt:Q5PI54"
/note="bidirectionally degrades single-stranded DNA into
large acid-insoluble oligonucleotides"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease VII large subunit"
/protein_id="YP_001569443.1"
/db_xref="GI:161502331"
/db_xref="InterPro:IPR003753"
/db_xref="InterPro:IPR004365"
/db_xref="InterPro:IPR008994"
/db_xref="GeneID:5764383"
/translation="MLSSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPAS
GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM
QPAGEGLLQQKYEQLKAKLQAEGLFDQQYKHPLPSPAYCVGVITSKTGAALHDILHVL
KRRDPSLPVIIYPAAVQGEDAPGQIVRAITLANARKECDVLIVGRGGGSLEDLWSFND
ERVARAIFASTIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQMQT
ACQRLEMAMDYYLANRQRRFSQLYHRLQQQHPQLRLARQQTTLERLRQRMHLALENQL
KQANQRQQRASQRLRQQNPQPRIHRAQSRIQQLEYRLAENFRARLSEQRERFGNTVTH
LEAVSPLATLARGYSVSTATDGNVLKKVKQLKVGDMMTTRLKDGWVTSEVTAIKPVKK
IRLG"
misc_feature complement(362115..363410)
/gene="xseA"
/locus_tag="SARI_00364"
/note="exodeoxyribonuclease VII, large subunit; Region:
xseA; TIGR00237"
/db_xref="CDD:161783"
misc_feature complement(363123..363356)
/gene="xseA"
/locus_tag="SARI_00364"
/note="ExoVII_LU_OBF: A subfamily of OB folds
corresponding to the N-terminal OB-fold domain of
Escherichia coli exodeoxyribonuclease VII (ExoVII) large
subunit. E. coli ExoVII is composed of two non-identical
subunits. E. coli ExoVII is a...; Region: ExoVII_LU_OBF;
cd04489"
/db_xref="CDD:239935"
misc_feature complement(order(363132..363134,363192..363194,
363198..363200,363204..363206,363348..363350))
/gene="xseA"
/locus_tag="SARI_00364"
/note="generic binding surface II; other site"
/db_xref="CDD:239935"
misc_feature complement(order(363147..363155,363180..363188,
363207..363209,363252..363254,363258..363266,
363282..363284,363288..363299,363327..363335))
/gene="xseA"
/locus_tag="SARI_00364"
/note="generic binding surface I; other site"
/db_xref="CDD:239935"
gene 363517..365067
/locus_tag="SARI_00365"
/db_xref="GeneID:5764384"
CDS 363517..365067
/locus_tag="SARI_00365"
/inference="protein motif:HMMPanther:IPR001093"
/inference="protein motif:HMMPfam:IPR000644"
/inference="protein motif:HMMPfam:IPR001093"
/inference="protein motif:HMMSmart:IPR000644"
/inference="protein motif:HMMTigr:IPR005990"
/inference="protein motif:ScanRegExp:IPR001093"
/inference="similar to AA sequence:REFSEQ:YP_217496.1"
/note="catalyzes the synthesis of xanthosine monophosphate
by the NAD+ dependent oxidation of inosine monophosphate"
/codon_start=1
/transl_table=11
/product="inosine 5'-monophosphate dehydrogenase"
/protein_id="YP_001569444.1"
/db_xref="GI:161502332"
/db_xref="InterPro:IPR000644"
/db_xref="InterPro:IPR001093"
/db_xref="InterPro:IPR005990"
/db_xref="GeneID:5764384"
/translation="MQKSVDATDYVLYNAAAIFINLPGEILPMLRIAKEALTFDDVLL
VPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNM
SIERQAEEVRRVKKHESGVVTDPQTVLPTTTLHEVKALTERNGFAGYPVVTEDNELVG
IITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVDDNF
HLLGMITVKDFQKAERKPNSCKDEQGRLRVGAAVGAGAGNEERVDALVAAGVDVLLID
SSHGHSEGVLQRIRETRAKYPDLQIIGGNVATGAGARALAEAGCSAVKVGIGPGSICT
TRIVTGVGVPQITAVSDAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASAVMVGSML
AGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGRVA
YKGRLKEIIHQQMGGLRSCMGLTGCATIDELRTKAEFVRISGAGIQESHVHDVTITKE
SPNYRLGS"
misc_feature 363601..365061
/locus_tag="SARI_00365"
/note="inosine 5'-monophosphate dehydrogenase; Reviewed;
Region: PRK05567"
/db_xref="CDD:235507"
misc_feature 363622..>363864
/locus_tag="SARI_00365"
/note="TIM barrel proteins share a structurally conserved
phosphate binding motif and in general share an eight
beta/alpha closed barrel structure. Specific for this
family is the conserved phosphate binding site at the
edges of strands 7 and 8. The phosphate...; Region:
TIM_phosphate_binding; cl17186"
/db_xref="CDD:247740"
misc_feature 363880..364212
/locus_tag="SARI_00365"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains in the
inosine 5' monophosphate dehydrogenase (IMPDH) protein.
IMPDH is an essential enzyme that catalyzes the first step
unique to GTP synthesis, playing a...; Region:
CBS_pair_IMPDH; cd04601"
/db_xref="CDD:239974"
misc_feature <364243..364986
/locus_tag="SARI_00365"
/note="IMPDH: The catalytic domain of the inosine
monophosphate dehydrogenase. IMPDH catalyzes the
NAD-dependent oxidation of inosine 5'-monophosphate (IMP)
to xanthosine 5' monophosphate (XMP). It is a
rate-limiting step in the de novo synthesis of...; Region:
IMPDH; cd00381"
/db_xref="CDD:238223"
misc_feature order(364507..364515,364612..364614,364618..364620,
364681..364686,364753..364755,364759..364767,
364843..364848)
/locus_tag="SARI_00365"
/note="active site"
/db_xref="CDD:238223"
gene 365137..366714
/gene="guaA"
/locus_tag="SARI_00366"
/db_xref="GeneID:5764385"
CDS 365137..366714
/gene="guaA"
/locus_tag="SARI_00366"
/inference="protein motif:HMMPfam:IPR000991"
/inference="protein motif:HMMPfam:IPR001674"
/inference="protein motif:HMMPfam:IPR004506"
/inference="protein motif:HMMTigr:IPR001674"
/inference="protein motif:HMMTigr:IPR004739"
/inference="protein motif:ScanRegExp:IPR012998"
/inference="similar to AA sequence:REFSEQ:NP_804218.1"
/note="contains glutamine-hydrolyzing domain and glutamine
amidotransferase; GMP-binding domain; functions to produce
GMP from XMP in the IMP pathway"
/codon_start=1
/transl_table=11
/product="GMP synthase"
/protein_id="YP_001569445.1"
/db_xref="GI:161502333"
/db_xref="InterPro:IPR000991"
/db_xref="InterPro:IPR001674"
/db_xref="InterPro:IPR004506"
/db_xref="InterPro:IPR004739"
/db_xref="InterPro:IPR012998"
/db_xref="GeneID:5764385"
/translation="MTDNIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
QIREFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEG
SNEREFGYAQVEVLTDSALIRGIEDSLTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAV
ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVMDM
FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTV
FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYGFLGRVSNRIINEVNGIS
RVVYDISGKPPATIEWE"
misc_feature 365149..366711
/gene="guaA"
/locus_tag="SARI_00366"
/note="GMP synthase; Reviewed; Region: guaA; PRK00074"
/db_xref="CDD:234614"
misc_feature 365164..365730
/gene="guaA"
/locus_tag="SARI_00366"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in GMP synthetase; Region: GATase1_GMP_Synthase;
cd01742"
/db_xref="CDD:153213"
misc_feature order(365185..365190,365308..365316,365392..365397,
365560..365562,365677..365679)
/gene="guaA"
/locus_tag="SARI_00366"
/note="AMP/PPi binding site [chemical binding]; other
site"
/db_xref="CDD:153213"
misc_feature order(365311..365313,365395..365397)
/gene="guaA"
/locus_tag="SARI_00366"
/note="candidate oxyanion hole; other site"
/db_xref="CDD:153213"
misc_feature order(365392..365394,365677..365679,365683..365685)
/gene="guaA"
/locus_tag="SARI_00366"
/note="catalytic triad [active]"
/db_xref="CDD:153213"
misc_feature order(365404..365406,365563..365565,365671..365673)
/gene="guaA"
/locus_tag="SARI_00366"
/note="potential glutamine specificity residues [chemical
binding]; other site"
/db_xref="CDD:153213"
misc_feature 365821..366708
/gene="guaA"
/locus_tag="SARI_00366"
/note="The C-terminal domain of GMP synthetase. It
contains two subdomains; the ATP pyrophosphatase domain
which closes to the N-termial and the dimerization domain
at C-terminal end. The ATP-PPase is a twisted,
five-stranded parallel beta-sheet sandwiched...; Region:
GMP_synthase_C; cd01997"
/db_xref="CDD:238955"
misc_feature order(365821..365895,365899..365931,365935..365967,
365998..366111,366127..366171,366175..366177,
366202..366231,366244..366318,366334..366378)
/gene="guaA"
/locus_tag="SARI_00366"
/note="ATP Binding subdomain [chemical binding]; other
site"
/db_xref="CDD:238955"
misc_feature order(365833..365841,365845..365856,365908..365910,
365914..365916,366277..366279)
/gene="guaA"
/locus_tag="SARI_00366"
/note="Ligand Binding sites [chemical binding]; other
site"
/db_xref="CDD:238955"
misc_feature order(366403..366441,366466..366495,366502..366534,
366544..366591,366610..366636,366640..366708)
/gene="guaA"
/locus_tag="SARI_00366"
/note="Dimerization subdomain; other site"
/db_xref="CDD:238955"
gene complement(366839..367612)
/locus_tag="SARI_00367"
/db_xref="GeneID:5760039"
CDS complement(366839..367612)
/locus_tag="SARI_00367"
/inference="similar to AA sequence:REFSEQ:NP_931775.1"
/note="'COG: NOG22997 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569446.1"
/db_xref="GI:161502334"
/db_xref="GeneID:5760039"
/translation="MKLDFRIEHEFGSSESIKPVELATLFQGVTKQLDELLGTKRSWY
EQGYSRKQALQYKIFTEEGISEDVLDRWEMEYKKDYPNWTTGIWDGGSDEDSAGVDCY
PSYSSTHRRKNPLNLVVSFSIDLSQTRLNVEKMINFLSFLLHSTNNCTYSCVESGGYS
FSEIIPKENGYDEVYKKLFPDRISCGWMLFIPAIILPDLIPDAARIVPVLNGNKQIGT
IVVSTEEIFDGNNKEHQGKANDIEIKLLDLGLLPLMTEL"
gene complement(367756..368838)
/locus_tag="SARI_00368"
/db_xref="GeneID:5760606"
CDS complement(367756..368838)
/locus_tag="SARI_00368"
/inference="protein motif:superfamily:IPR009057"
/inference="similar to AA sequence:REFSEQ:ZP_00725515.1"
/note="'COG: COG3335 Transposase and inactivated
derivatives;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569447.1"
/db_xref="GI:161502335"
/db_xref="InterPro:IPR009057"
/db_xref="GeneID:5760606"
/translation="MLPAMKIFITAQQKTELERLHDSSRDGRVRDRIKAILLASEGWS
SAMIAQALRLHQTTVDHHISEFLNKGKLKPENGGSDSKLSAEQRAFLISQLSNNLFHH
TSDIIAFFSRTWDIVFSVPGMNKWLHRNGFTYKKPSGVPHKFSEEKQRQFIEYYEELK
ATAGDEPVLFIDAVHPTQATKISYGWIRKGHKKAVKTTGSRTRLNIMGTLNLKTLATP
LICEYKTINEYNVSTCAVGNANLKICIRGNVINVNGKLSIHVDALGFYLKDTYDFLDD
NKLGIDIPECLGIWGKNRILNKIDTASYMTSYASGSFGILVQLYSGFVPVFNSDFREW
QKKTTLVEITSFFLMYYGLLHLIKIG"
misc_feature complement(368629..368757)
/locus_tag="SARI_00368"
/note="Homeodomain-like domain; Region: HTH_23; pfam13384"
/db_xref="CDD:222091"
misc_feature complement(368446..368745)
/locus_tag="SARI_00368"
/note="Winged helix-turn helix; Region: HTH_29; pfam13551"
/db_xref="CDD:222216"
misc_feature complement(368371..368547)
/locus_tag="SARI_00368"
/note="Winged helix-turn helix; Region: HTH_33; pfam13592"
/db_xref="CDD:222248"
misc_feature complement(<368137..368340)
/locus_tag="SARI_00368"
/note="DDE superfamily endonuclease; Region: DDE_3;
pfam13358"
/db_xref="CDD:222070"
gene complement(368896..369456)
/locus_tag="SARI_00369"
/db_xref="GeneID:5760607"
CDS complement(368896..369456)
/locus_tag="SARI_00369"
/inference="similar to AA sequence:INSD:ABG70793.1"
/note="'COG: NOG23066 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569448.1"
/db_xref="GI:161502336"
/db_xref="GeneID:5760607"
/translation="MKINLFNLFRKKNKLQDDFPVTQFSALPKKGEGYPSFFSLEKNN
IYAHSACFMIKPDDISFIEHLVELFFHAKVKVSEIKEKFADHDKVLICYKFKEFEQEV
VRLITNDNEFINCLCEKGLEPPDPECVFPDKDFGTYGSLQGDMEFWWHVYWKPFWESL
KEEERKQYLERSNLSIGTIEFLEHHH"
gene complement(369446..370330)
/locus_tag="SARI_00370"
/db_xref="GeneID:5760608"
CDS complement(369446..370330)
/locus_tag="SARI_00370"
/inference="similar to AA sequence:INSD:ABG70792.1"
/note="'COG: NOG31152 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569449.1"
/db_xref="GI:161502337"
/db_xref="GeneID:5760608"
/translation="MTEHSTLTNETPHSTYDITGMLMPARAFFFVVVDEPGKDGFLVR
KIYASNSDPYLSKMDLSEAKMLSETNPERYGLIPKDFSASYSVAEHVMGNNASAYIST
SSAFPQGSPRFEGKTIIVDIDKAVRSGAKLISTAEILKSLDEYKNQNPHLGKRIDKIS
KYVNDIDKEVLLHGEKIPAAAIFTPETLKYTKYFTRAARVVQVTGIVFTAYDLEQASE
KSLKNGSVKPITAEAIRQAGGWGMAVAGAKIGTVAGAAVGIETGPGAALTGLIGGIIF
GTAGYFGADWVADHIDEN"
gene complement(370331..372802)
/locus_tag="SARI_00371"
/db_xref="GeneID:5760609"
CDS complement(370331..372802)
/locus_tag="SARI_00371"
/inference="protein motif:HMMPfam:IPR006533"
/inference="protein motif:HMMTigr:IPR006533"
/inference="similar to AA sequence:INSD:ABP58869.1"
/note="'COG: COG3501 Uncharacterized protein conserved in
bacteria;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569450.1"
/db_xref="GI:161502338"
/db_xref="InterPro:IPR006533"
/db_xref="GeneID:5760609"
/translation="MDNWSALFDGQTRYGLDINDSTMKADVLRFRGREALSEPFNWDI
EFTTLQANIPPEQVLMKYASFRMRNGKNVHGMVTRLEWLSTSRDQSHYRLTLSSRLTL
LGYTRQCAVYQNQSVPEVVEQVLRKHGLEGPDFEFRLERTYPARELITQWQETDLQFI
QRILSEVGIYWRTMMDDVRGLDTYILADSQLNYQFDVQLPYSEPSGLFDGAAESVWDV
RTWHNIATGTVATRNYNYRTATTPMDATVSVRNDAVTTGEHYRYAAPYRVAGDDASPE
PETESGAFYARIHHERELNRSARIHLFSNAAHLTPGQVLEPQGDAITALKEGVILTQV
TYRGARDSRLHVSVWGLPYTERYCFRPVEVPRPVIPGTLPARIESREKNDIYAHLDEQ
GRYRVKLDFDREGTESGYGYLWLRMAKPYAGETLGWHTPLIDGTEVAIAYSNGDIDLP
YIAYALHDSEHPDHVTRDNHTRNVLRTPANNKLRMEDRRGEEHVRLATEYGKTQLNSG
HLVDAQGQRRGTGAELRTDEWGTIRAGKGLFVSADAQAKAQGEVLDMDAALKEIDRLN
QQLQQLEMAAEKAQALKADVDSQIQMFEQRLKPLSEVVLFSAPEGMALTSGEHLQMTA
TKNVAMNAGGNFSAGVMGNLTALAGEKLGLFARTGQLSLKVSEGPVEVQAQNASMRLF
AEKKLTLSSASDISFAGKKRITLVGGGSYLRLEAGKVEYGTTATYLRRVKRTMFAGAH
STPTSSVLMPLVEDLIKDGFFDEQFRILNDSGKPMANVPYFISTESGETFKGVTDNQG
LCKRVFSKEASKLTVWLGVQALERW"
misc_feature complement(371300..372730)
/locus_tag="SARI_00371"
/note="Rhs element Vgr protein; Region: vgr_GE; TIGR01646"
/db_xref="CDD:233505"
misc_feature complement(371780..372706)
/locus_tag="SARI_00371"
/note="Phage late control gene D protein (GPD); Region:
Phage_GPD; pfam05954"
/db_xref="CDD:218824"
misc_feature complement(371402..371650)
/locus_tag="SARI_00371"
/note="Phage-related baseplate assembly protein; Region:
Phage_base_V; pfam04717"
/db_xref="CDD:218225"
misc_feature complement(371075..371392)
/locus_tag="SARI_00371"
/note="Putative type VI secretion system Rhs element Vgr;
Region: T6SS_Vgr; pfam13296"
/db_xref="CDD:205476"
misc_feature complement(370394..371146)
/locus_tag="SARI_00371"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4253"
/db_xref="CDD:226704"
gene 373548..373781
/locus_tag="SARI_00372"
/db_xref="GeneID:5760610"
CDS 373548..373781
/locus_tag="SARI_00372"
/inference="protein motif:HMMPfam:IPR003756"
/inference="similar to AA sequence:REFSEQ:YP_050337.1"
/note="'COG: NOG23217 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569451.1"
/db_xref="GI:161502339"
/db_xref="InterPro:IPR003756"
/db_xref="GeneID:5760610"
/translation="MKVETISYVKKNAATLDLSEPILVTQNGVPAYVIESYDQQQERE
NTIALLKLLTLSEKDKAEGRVFSKDQLLDGFAD"
misc_feature 373548..373754
/locus_tag="SARI_00372"
/note="Antitoxin Phd_YefM, type II toxin-antitoxin system;
Region: PhdYeFM_antitox; pfam02604"
/db_xref="CDD:217137"
gene 373812..374144
/locus_tag="SARI_00373"
/db_xref="GeneID:5760611"
CDS 373812..374144
/locus_tag="SARI_00373"
/inference="similar to AA sequence:REFSEQ:YP_050336.1"
/note="'COG: NOG36091 non supervised orthologous group;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569452.1"
/db_xref="GI:161502340"
/db_xref="GeneID:5760611"
/translation="MKQQVTFEYTLTVKHCIDTIAGFLRRVDVEPRPVIADILTQFES
AVAQFPLGCQIYPELLKIGCAKYREFNHAEGYRVLHSVDGALVTAHAILAHRQDVQQL
LFKRLIMA"
gene 374683..374838
/locus_tag="SARI_00374"
/db_xref="GeneID:5760612"
CDS 374683..374838
/locus_tag="SARI_00374"
/inference="protein motif:Gene3D:IPR011990"
/inference="similar to AA sequence:INSD:CAD08375.1"
/note="'COG: COG0790 FOG: TPR repeat, SEL1 subfamily;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569453.1"
/db_xref="GI:161502341"
/db_xref="InterPro:IPR011990"
/db_xref="GeneID:5760612"
/translation="MYAASDYVIPDYKLAIKWLEKSVKQGAYFSYFVIGYHYNYGKNF
PLNKKTR"
misc_feature <374683..>374808
/locus_tag="SARI_00374"
/note="FOG: TPR repeat, SEL1 subfamily [General function
prediction only]; Region: COG0790"
/db_xref="CDD:223861"
gene 374835..375095
/locus_tag="SARI_00375"
/db_xref="GeneID:5760613"
CDS 374835..375095
/locus_tag="SARI_00375"
/inference="protein motif:Gene3D:IPR011990"
/inference="protein motif:HMMPfam:IPR006597"
/inference="protein motif:HMMSmart:IPR006597"
/note="'KEGG: noc:Noc_2705 0.00024 Sel1-like repeat
protein K01467;
COG: COG0790 FOG: TPR repeat, SEL1 subfamily;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569454.1"
/db_xref="GI:161502342"
/db_xref="InterPro:IPR006597"
/db_xref="InterPro:IPR011990"
/db_xref="GeneID:5760613"
/translation="MKWYRKAAVLGGFTQEILGDACMYGNGIPQNTQMGLAWYRKAAE
RGWLKRKKLLLVCICEAKGYRRITNKCFAGIPESRKPSCRND"
misc_feature <374835..>374972
/locus_tag="SARI_00375"
/note="FOG: TPR repeat, SEL1 subfamily [General function
prediction only]; Region: COG0790"
/db_xref="CDD:223861"
misc_feature 374886..374972
/locus_tag="SARI_00375"
/note="Sel1 repeat; Region: Sel1; cl02723"
/db_xref="CDD:243158"
gene complement(375359..375550)
/locus_tag="SARI_00376"
/db_xref="GeneID:5760614"
CDS complement(375359..375550)
/locus_tag="SARI_00376"
/inference="similar to AA sequence:INSD:AAL21400.1"
/note="'COG: NOG13900 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569455.1"
/db_xref="GI:161502343"
/db_xref="GeneID:5760614"
/translation="MSQANSMRKRHRFNTRMTRIVLLISFLFFFGRFVYSSIGAWQHH
QDKKEAQQSTLSVNTPGQR"
misc_feature complement(375380..375526)
/locus_tag="SARI_00376"
/note="Protein of unknown function (DUF2633); Region:
DUF2633; pfam11119"
/db_xref="CDD:220988"
gene 375964..378177
/locus_tag="SARI_00377"
/db_xref="GeneID:5760615"
CDS 375964..378177
/locus_tag="SARI_00377"
/inference="protein motif:HMMPfam:IPR001633"
/inference="protein motif:HMMPfam:IPR007895"
/inference="protein motif:HMMSmart:IPR000160"
/inference="protein motif:HMMSmart:IPR001633"
/note="'KEGG: shn:Shewana3_3829 5.3e-23 diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745;
COG: COG2199 FOG: GGDEF domain;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569456.1"
/db_xref="GI:161502344"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR001633"
/db_xref="InterPro:IPR007895"
/db_xref="GeneID:5760615"
/translation="MKLNKTYINIRDKWWGLPLLLPSILLPVLSSANTYAHTSTGNVV
LFYLPLAFMFSLMLFFGWAALPGIVIAIFWRTYPQMGLYETLSVTMHFIITIVLSWGG
YRVFAPRRNNVSHGDARLIFQRMFWQVFCSATLFLVIYQCAAFVGMYESKSSLMGIMP
FNINTLINYQALLVGNLIGVPLCYFIIRTIRNPLHLRGYYQQLKLQVDSKTTKKEIVI
WLAVLITLMFILCMPLTDNSSIFSTNYTLSLLLPVMLWGAMHYGYKFISIIWAFVLIT
SIHYYQRYMPWYSGYDTQLAITSSSYLVFSFIVNYMAVLATRQRVVSSRARRLAYLDP
VVHLPNLRALNRALKNAPCSTLCFLHVPGLELLGKNYGVMLRIQYKQKLSHWITQMLA
SNECVYQMSGHDLVLRLNTESYQQRIEALDKHIKQFRFIWDGLPLQPPVGVSYCCVRS
PVSHLYLLLGELGTSSDLSLTTNAPEDLQRRGAVHLQRDLKGRVAMMNRLQQALEHDH
FFLMAQPISGVRGDVYHEILLRLRDENGDVINPDNFLPVAHEFGLSSAIDLWVIENTL
RFIATSREYMPAHRFAVNLSPTSVCRAPFPSEVNQLLTQYQVEPWQLVFEVTESNSLT
NADQAQLTLGQLQQFGCQIAIDDFGTGYASYARLKNVNADILKIDGSFIRNIVSNSLD
YQIVSSICHLARMKKMQVVAEYVESEEIRSAVLSLGIDYLQGYLIGEPQPLSEIQ"
misc_feature 376057..376923
/locus_tag="SARI_00377"
/note="MASE1; Region: MASE1; pfam05231"
/db_xref="CDD:218514"
misc_feature 376945..377355
/locus_tag="SARI_00377"
/note="diguanylate cyclase; Region: GGDEF; smart00267"
/db_xref="CDD:128563"
misc_feature 377455..378168
/locus_tag="SARI_00377"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:238923"
gene complement(378213..379754)
/locus_tag="SARI_00378"
/db_xref="GeneID:5760616"
CDS complement(378213..379754)
/locus_tag="SARI_00378"
/inference="protein motif:HMMPfam:IPR003695"
/inference="similar to AA sequence:SwissProt:P0A269"
/note="'KEGG: sty:STY2743 1.0e-273 ppx; exopolyphosphatase
K01514;
COG: COG0248 Exopolyphosphatase;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="exopolyphosphatase"
/protein_id="YP_001569457.1"
/db_xref="GI:161502345"
/db_xref="InterPro:IPR003695"
/db_xref="GeneID:5760616"
/translation="MPIYDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
VHLADGLGADNKLSEEAMERGLSCLSLFAERLQGFSPSSVCIVGTHTLRQAQNAADFL
KRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPR
LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQYRIQGWNVAMGASG
TIKAAHEVLLALGEKDGFITPERLDELKSEVLKHRSFNALSLPGLSEERKAVFVPGLA
ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTAKSLANQYNIDREQAR
RVLETTMQMYEQWQAQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQHS
DLPGFNQEQQMMMATLVRYHRKAVKLDDMPRFTLFKKKQYLPLIQLLRLGVLLNNQRQ
ATTTPPTLRLTTNDNHWTLCFPHDWFSQNALVLLDLEKEQQYWEAVTGWRLNIEEENS
PEIAA"
misc_feature complement(378216..379754)
/locus_tag="SARI_00378"
/note="exopolyphosphatase; Provisional; Region: PRK10854"
/db_xref="CDD:182781"
misc_feature complement(379242..379715)
/locus_tag="SARI_00378"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cd00012"
/db_xref="CDD:212657"
misc_feature complement(order(379317..379328,379392..379394,
379683..379685,379689..379691,379695..379706))
/locus_tag="SARI_00378"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
gene complement(379759..381825)
/locus_tag="SARI_00379"
/db_xref="GeneID:5760617"
CDS complement(379759..381825)
/locus_tag="SARI_00379"
/inference="protein motif:HMMPfam:IPR003414"
/note="catalyzes the reversible transfer of the terminal
phosphate of ATP to form a long chain polyphosphate"
/codon_start=1
/transl_table=11
/product="polyphosphate kinase"
/protein_id="YP_001569458.1"
/db_xref="GI:161502346"
/db_xref="InterPro:IPR003414"
/db_xref="GeneID:5760617"
/translation="MGQEKLYIEKELSWLAFNERVLQEAADKSNPLIERMRFLGIYSN
NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEM
ARNQIFLINERQLSVNQQSWLRHYFKHYLRQHITPILINRETDLVQFLKDDYTYLAVE
IIRGDTINYALLEIPSDKVPRFVNLPPETPRRRKPMILLDNILRYCLDDIFKGFFDYD
ALNAYSMKMTRDAEYDLVHEMESSLMELMSSSLKQRLTAEPVRFVYQRDMPAALVDVL
REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHLWFDKEKFRNGFD
AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRREGYDVV
RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
NSRRLLYEMIDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASGSGVQVNLLVRGM
CSLIPQLEGISDNIRAISIVDRYLEHDRVYIFVNGGDKQVWLSSADWMTRNIDYRIEV
ATPILDPRLKQQVLDIIDILFSDTVKARFIDKELSNRYVPRGNRRKVQAQLAIYDYIK
SLEQPD"
misc_feature complement(379762..381822)
/locus_tag="SARI_00379"
/note="Polyphosphate kinase [Inorganic ion transport and
metabolism]; Region: Ppk; COG0855"
/db_xref="CDD:223924"
misc_feature complement(381493..381810)
/locus_tag="SARI_00379"
/note="Polyphosphate kinase N-terminal domain; Region:
PP_kinase_N; pfam13089"
/db_xref="CDD:205270"
misc_feature complement(380854..381471)
/locus_tag="SARI_00379"
/note="Polyphosphate kinase middle domain; Region:
PP_kinase; pfam02503"
/db_xref="CDD:217072"
misc_feature complement(380350..380835)
/locus_tag="SARI_00379"
/note="Catalytic domain of phospholipase D superfamily
proteins; Region: PLDc_SF; cl15239"
/db_xref="CDD:246902"
misc_feature complement(order(380416..380418,380449..380451,
380455..380457,380515..380517,380521..380523))
/locus_tag="SARI_00379"
/note="putative active site [active]"
/db_xref="CDD:197200"
misc_feature complement(380521..380523)
/locus_tag="SARI_00379"
/note="catalytic site [active]"
/db_xref="CDD:197200"
misc_feature complement(379834..380328)
/locus_tag="SARI_00379"
/note="Catalytic C-terminal domain, second repeat, of
Escherichia coli polyphosphate kinase 1 and similar
proteins; Region: PLDc_EcPPK1_C2_like; cd09167"
/db_xref="CDD:197264"
misc_feature complement(order(379906..379908,379915..379920,
379927..379932,379939..379941,379948..379950,
379954..379968,379996..380004,380041..380061,
380302..380304,380317..380328))
/locus_tag="SARI_00379"
/note="domain interface [polypeptide binding]; other site"
/db_xref="CDD:197264"
misc_feature complement(order(379957..379959,379963..379965,
379990..379992,379996..379998,380044..380046,
380050..380052,380056..380058,380134..380136))
/locus_tag="SARI_00379"
/note="active site"
/db_xref="CDD:197264"
misc_feature complement(380050..380052)
/locus_tag="SARI_00379"
/note="catalytic site [active]"
/db_xref="CDD:197264"
gene complement(382014..382652)
/gene="purN"
/locus_tag="SARI_00380"
/db_xref="GeneID:5760618"
CDS complement(382014..382652)
/gene="purN"
/locus_tag="SARI_00380"
/inference="protein motif:Gene3D:IPR002376"
/inference="protein motif:HMMPfam:IPR002376"
/inference="protein motif:HMMPIR:IPR004607"
/inference="protein motif:HMMTigr:IPR004607"
/inference="protein motif:ScanRegExp:IPR001555"
/inference="protein motif:superfamily:IPR002376"
/inference="similar to AA sequence:INSD:CAD02702.1"
/note="glycinamide ribonucleotide transformylase; GAR
Tfase; catalyzes the synthesis of
5'-phosphoribosylformylglycinamide from
5'-phosphoribosylglycinamide and
10-formyltetrahydrofolate; PurN requires formyl folate for
the reaction unlike PurT which uses formate"
/codon_start=1
/transl_table=11
/product="phosphoribosylglycinamide formyltransferase"
/protein_id="YP_001569459.1"
/db_xref="GI:161502347"
/db_xref="InterPro:IPR001555"
/db_xref="InterPro:IPR002376"
/db_xref="InterPro:IPR004607"
/db_xref="GeneID:5760618"
/translation="MNIVVLISGNGSNLQAIIDACEAKKLKGTLRAVFSNKADAFGLE
RAREAGIPAQALTADRFDSRDAFDRALIREIDAYAPDVVVLAGFMRILSPAFVAHYHG
RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFADD
SEEDITARVQTQEHAIYPLVIGWFAEGRLKMRDNAAWLDGRRLPPQGYASDE"
misc_feature complement(382056..382652)
/gene="purN"
/locus_tag="SARI_00380"
/note="phosphoribosylglycinamide formyltransferase;
Reviewed; Region: purN; PRK05647"
/db_xref="CDD:235544"
misc_feature complement(382101..382649)
/gene="purN"
/locus_tag="SARI_00380"
/note="Phosphoribosylglycinamide formyltransferase (GAR
transformylase, GART); Region: FMT_core_GART; cd08645"
/db_xref="CDD:187714"
misc_feature complement(order(382134..382136,382221..382226,
382233..382238,382242..382244,382302..382304,
382326..382337,382362..382364,382377..382400,
382611..382619,382632..382634))
/gene="purN"
/locus_tag="SARI_00380"
/note="active site"
/db_xref="CDD:187714"
misc_feature complement(order(382134..382136,382326..382328,
382332..382334,382392..382397,382614..382619))
/gene="purN"
/locus_tag="SARI_00380"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187714"
misc_feature complement(order(382221..382226,382233..382238,
382335..382337,382362..382364,382377..382385,
382389..382391,382398..382400))
/gene="purN"
/locus_tag="SARI_00380"
/note="cosubstrate binding site; other site"
/db_xref="CDD:187714"
misc_feature complement(order(382221..382223,382329..382331,
382335..382337))
/gene="purN"
/locus_tag="SARI_00380"
/note="catalytic site [active]"
/db_xref="CDD:187714"
gene complement(382652..383704)
/locus_tag="SARI_00381"
/db_xref="GeneID:5760619"
CDS complement(382652..383704)
/locus_tag="SARI_00381"
/inference="protein motif:HMMPfam:IPR000728"
/inference="protein motif:HMMPfam:IPR010918"
/inference="protein motif:HMMTigr:IPR004733"
/inference="similar to AA sequence:REFSEQ:NP_461434.2"
/note="catalyzes the formation of
1-(5-phosphoribosyl)-5-aminoimidazole from
2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in
purine biosynthesis"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole synthetase"
/protein_id="YP_001569460.1"
/db_xref="GI:161502348"
/db_xref="InterPro:IPR000728"
/db_xref="InterPro:IPR004733"
/db_xref="InterPro:IPR010918"
/db_xref="GeneID:5760619"
/translation="MGNQAVTDKTSLSYKDAGVDIDAGNALVDRIKGVVKKTRRPEVM
GGLGGFGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDAIGIDLVAMCVNDLVV
QGAEPLFFLDYYATGKLDVDTAASVINGIAEGCLQSGCALVGGETAEMPGMYHGEDYD
VAGFCVGVVEKSEIIDGSRVAEGDVLIALGSSGPHSNGYSLVRKIIDVSGCDPQTTQL
EGKPLADHLLEPTRIYVKSVLELIENIDVHAIAHLTGGGFWENIPRVLPENTQAIINE
SSWQWPAIFTWLQTAGNVSRHEMYRTFNCGVGMVIALSAPEADKALALLNEKGENAWQ
IGIIKASDSEQRVVIK"
misc_feature complement(382691..383671)
/locus_tag="SARI_00381"
/note="phosphoribosylaminoimidazole synthetase;
Provisional; Region: PRK05385"
/db_xref="CDD:235439"
misc_feature complement(382688..383530)
/locus_tag="SARI_00381"
/note="PurM (Aminoimidazole Ribonucleotide [AIR]
synthetase), one of eleven enzymes required for purine
biosynthesis, catalyzes the conversion of
formylglycinamide ribonucleotide (FGAM) and ATP to AIR,
ADP, and Pi, the fifth step in de novo purine
biosynthesis; Region: PurM; cd02196"
/db_xref="CDD:100032"
misc_feature complement(order(382913..382915,383213..383215,
383225..383230,383249..383251,383255..383257,
383267..383269,383360..383362,383369..383371,
383378..383380,383396..383398,383408..383410,
383474..383476,383492..383494,383498..383500,
383504..383515))
/locus_tag="SARI_00381"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100032"
misc_feature complement(order(383267..383275,383408..383410))
/locus_tag="SARI_00381"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:100032"
gene 384099..384725
/gene="upp"
/locus_tag="SARI_00382"
/db_xref="GeneID:5760620"
CDS 384099..384725
/gene="upp"
/locus_tag="SARI_00382"
/inference="protein motif:HMMPfam:IPR000836"
/inference="protein motif:HMMTigr:IPR005765"
/inference="similar to AA sequence:INSD:CAD02700.1"
/note="Catalyzes the formation of uracil and
5-phospho-alpha-D-ribosy 1-diphosphate from UMP and
diphosphate"
/codon_start=1
/transl_table=11
/product="uracil phosphoribosyltransferase"
/protein_id="YP_001569461.1"
/db_xref="GI:161502349"
/db_xref="InterPro:IPR000836"
/db_xref="InterPro:IPR005765"
/db_xref="GeneID:5760620"
/translation="MKIVEVKHPLVKHKLGLMRENDISTKRFRELASEVGSLLTYEAT
ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMEGVLENVPSARISVVGMY
RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
misc_feature 384282..384647
/gene="upp"
/locus_tag="SARI_00382"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(384327..384329,384333..384335,384486..384494,
384498..384512,384582..384584)
/gene="upp"
/locus_tag="SARI_00382"
/note="active site"
/db_xref="CDD:206754"
gene 384813..386102
/locus_tag="SARI_00383"
/db_xref="GeneID:5760621"
CDS 384813..386102
/locus_tag="SARI_00383"
/inference="protein motif:HMMPfam:IPR006043"
/inference="protein motif:HMMTigr:IPR006042"
/inference="protein motif:ScanRegExp:IPR006042"
/inference="similar to AA sequence:REFSEQ:YP_149695.1"
/note="'KEGG: bcz:BCZK0244 1.3e-07 guanine-hypoxanTHIne
permease; xanTHIne/uracil permease family protein K06901;
COG: COG2233 XanTHIne/uracil permeases;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="uracil transporter"
/protein_id="YP_001569462.1"
/db_xref="GI:161502350"
/db_xref="InterPro:IPR006042"
/db_xref="InterPro:IPR006043"
/db_xref="GeneID:5760621"
/translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
LVSFIVKKAGTGWLDVMFPPAAMGAIVAVIGLELAGVAAGMAGLLTAQGQSPDTKTII
ISMATLAVTVFGSVLFRGFLAIIPILIGVLAGYALSFALGVVDTTPIAQAHWFALPTF
YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLVRDPGLHRSMFANGLSTIV
SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQIIPLPVM
GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVHIGAAELKGM
ALATIVGIGLSLIFKLISLLRPEEVVLEANDTQPPHQ"
misc_feature 384816..386099
/locus_tag="SARI_00383"
/note="uracil transporter; Provisional; Region: PRK10720"
/db_xref="CDD:236744"
gene 386173..386898
/locus_tag="SARI_00384"
/db_xref="GeneID:5760622"
CDS 386173..386898
/locus_tag="SARI_00384"
/inference="protein motif:HMMPfam:IPR013317"
/inference="similar to AA sequence:INSD:AAL21390.1"
/note="'controls initiation of DNA replication by
inhibiting re-initiation of replication, promotes
hydrolysis of DnaA-bound ATP'"
/codon_start=1
/transl_table=11
/product="DNA replication initiation factor"
/protein_id="YP_001569463.1"
/db_xref="GI:161502351"
/db_xref="InterPro:IPR013317"
/db_xref="GeneID:5760622"
/translation="MQSWVEVSLNTPAQLSLPLYLPDDETFASFWPGDNASLLAALQN
VLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGME
HLSLVCIDNIECVAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS
RLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQ
LDHASITAQRKLTIPFVKEILKL"
misc_feature 386185..>386892
/locus_tag="SARI_00384"
/note="ATPase involved in DNA replication initiation [DNA
replication, recombination, and repair]; Region: DnaA;
COG0593"
/db_xref="CDD:223666"
misc_feature 386191..386895
/locus_tag="SARI_00384"
/note="DNA replication initiation factor; Provisional;
Region: PRK08084"
/db_xref="CDD:181224"
gene complement(386925..387305)
/locus_tag="SARI_00385"
/db_xref="GeneID:5760623"
CDS complement(386925..387305)
/locus_tag="SARI_00385"
/inference="protein motif:Gene3D:IPR012335"
/inference="protein motif:HMMPfam:IPR006660"
/inference="protein motif:HMMTigr:IPR006659"
/inference="protein motif:superfamily:IPR012336"
/inference="similar to AA sequence:INSD:AAV76385.1"
/note="'KEGG: mca:MCA2520 1.2e-32 arsC; arsenate
reductase;
COG: COG1393 Arsenate reductase and related proteins,
glutaredoxin family;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569464.1"
/db_xref="GI:161502352"
/db_xref="InterPro:IPR006659"
/db_xref="InterPro:IPR006660"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="GeneID:5760623"
/translation="MASQGELMTDTIKIYHNPRCSKSRDTLNLLKSNGVEPEVVLYLD
TPADGATVRELLRMLGMSSARELMRQKEDLYKTLHLADSQLSEEALIQALVEHPKLME
RPIVVANGQARIGRPPEQVLEILG"
misc_feature complement(386934..387272)
/locus_tag="SARI_00385"
/note="Arsenate Reductase (ArsC) family, ArsC subfamily;
arsenic reductases similar to that encoded by arsC on the
R733 plasmid of Escherichia coli. E. coli ArsC catalyzes
the reduction of arsenate [As(V)] to arsenite [As(III)],
the first step in the...; Region: ArsC_ArsC; cd03034"
/db_xref="CDD:239332"
misc_feature complement(386934..387263)
/locus_tag="SARI_00385"
/note="ArsC family; Region: ArsC; pfam03960"
/db_xref="CDD:202832"
misc_feature complement(order(386958..386960,386997..386999,
387099..387101,387246..387248))
/locus_tag="SARI_00385"
/note="catalytic residues [active]"
/db_xref="CDD:239332"
gene complement(387324..388787)
/locus_tag="SARI_00386"
/db_xref="GeneID:5760624"
CDS complement(387324..388787)
/locus_tag="SARI_00386"
/inference="protein motif:Gene3D:IPR011990"
/inference="protein motif:HMMPfam:IPR001915"
/inference="protein motif:HMMPfam:IPR011717"
/inference="protein motif:HMMPfam:IPR013105"
/inference="similar to AA sequence:INSD:AAL21388.1"
/note="'KEGG: eci:UTI89_C2810 6.6e-238 yfgC; hypothetical
protein YfgC precursor;
COG: COG4783 Putative Zn-dependent protease, contains TPR
repeats;
Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569465.2"
/db_xref="GI:448236192"
/db_xref="InterPro:IPR001915"
/db_xref="InterPro:IPR011717"
/db_xref="InterPro:IPR011990"
/db_xref="InterPro:IPR013105"
/db_xref="GeneID:5760624"
/translation="MFRQLKKNLVATLIAAVALGQVAPAFADPADTLPDMGTSAGSTL
SIGQEMQMGDFYVRQLRGSAPLINDPLLVQYINALGMRLVSHADSVKTPFHFFLINND
EINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHVTQRHLARAMEDQKRSAPLT
WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRAGFD
PQAMPSFLEKLLDQARYSTRPPEILLTHPLPESRLADARNRANQMHPVVVQSSSDFYL
AKARTLGMYNSGRNQLTSDLLEQWSKGNVRQQHAAQYGRALQAMEAGKYDEARKTLQP
LLSAEPNNAWYLDLATDIDLGQKRANDAINRLKNARDLRVNPVLQLNLANAYLQGGQP
KAAETILNRYTFSHKDDGNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL
SSASSLAKLGSQQQARYDARIDQLRQLQERFKPYTKM"
misc_feature complement(387330..388787)
/locus_tag="SARI_00386"
/note="Putative Zn-dependent protease, contains TPR
repeats [General function prediction only]; Region:
COG4783"
/db_xref="CDD:227122"
misc_feature complement(388026..388670)
/locus_tag="SARI_00386"
/note="Peptidase family M48; Region: Peptidase_M48;
cl12018"
/db_xref="CDD:245838"
gene 388995..390062
/locus_tag="SARI_00387"
/db_xref="GeneID:5760625"
CDS 388995..390062
/locus_tag="SARI_00387"
/inference="protein motif:HMMPfam:IPR002549"
/inference="similar to AA sequence:INSD:AAL21387.1"
/note="'KEGG: tbd:Tbd_2668 2.0e-28
phosphoribosylaminoimidazole-succinocarboxamide (SAICAR)
synthetase K01923;
COG: COG0628 Predicted permease;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569466.1"
/db_xref="GI:161502354"
/db_xref="InterPro:IPR002549"
/db_xref="GeneID:5760625"
/translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLV
AIVLAYLLEWPTARLQAIGCSRRWATSIVLILFVGILLLMAFVVMPIAWQQGIYLIRD
MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLNMGDSVVKYSLASLVGLL
TLAVYLVLVPLMVFFLVKDKEQMLNAVRRVLPRNRGLAGQVWNEMNQQITNYIRGKVL
EMVVVGVATWLVFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGT
EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
ATLIKAVVHAWPDGQVTDTSS"
misc_feature 389004..390041
/locus_tag="SARI_00387"
/note="Predicted permease, member of the PurR regulon
[General function prediction only]; Region: yhhT; COG0628"
/db_xref="CDD:223701"
misc_feature 389151..390032
/locus_tag="SARI_00387"
/note="Domain of unknown function DUF20; Region: UPF0118;
pfam01594"
/db_xref="CDD:216594"
gene 390340..391527
/locus_tag="SARI_00388"
/db_xref="GeneID:5760626"
CDS 390340..391527
/locus_tag="SARI_00388"
/inference="protein motif:HMMPfam:IPR008599"
/inference="similar to AA sequence:REFSEQ:YP_217476.1"
/note="'KEGG: shn:Shewana3_2682 2.6e-60 transcriptional
regulator, CdaR K01694;
COG: COG3835 Sugar diacid utilization regulator;
Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569467.1"
/db_xref="GI:161502355"
/db_xref="InterPro:IPR008599"
/db_xref="GeneID:5760626"
/translation="MRVLRKHYLKGYTARQIVQRAMKIIPYSVNVMDEHGVIIASGEP
SRLHQRHEGAILALKENRIVEIDSATANQLKGVRSGINLPISFHEQLIGVVGITGEPE
QVRAYAELVKMAAELVIEHMVLIEQRQWDKRYREELINQLILRENSTESLRSMAAYLG
IDLAVPRVVLIIELSQPDREALRNVMDYFENHARNHLVTFTEFNELIIIKPITLKEGK
WNTRQEMGELQMFKSWAASSGFSRILVGGYFAGETGLHRSLLTARATQAMAKRQKLRS
QYIFYHDHALPALLSGLSERWQVQELSRLWLQLAQHDAKGVLQQTLRTWFEHNCDLTQ
TAKALHIHVNTLRYRLQRCEDITHIKINELKSTLWLYIGMELQAESVPTDKLPLPGWN
EIC"
misc_feature 390361..391467
/locus_tag="SARI_00388"
/note="Sugar diacid utilization regulator [Transcription /
Signal transduction mechanisms]; Region: CdaR; COG3835"
/db_xref="CDD:226355"
misc_feature 390364..390768
/locus_tag="SARI_00388"
/note="Putative sugar diacid recognition; Region:
Diacid_rec; pfam05651"
/db_xref="CDD:147680"
misc_feature 391300..391467
/locus_tag="SARI_00388"
/note="PucR C-terminal helix-turn-helix domain; Region:
HTH_30; pfam13556"
/db_xref="CDD:205734"
gene 391574..392863
/locus_tag="SARI_00389"
/db_xref="GeneID:5760627"
CDS 391574..392863
/locus_tag="SARI_00389"
/inference="protein motif:HMMPfam:IPR004680"
/inference="similar to AA sequence:REFSEQ:YP_149700.1"
/note="'KEGG: eci:UTI89_C3106 6.5e-19 ygbN; hypothetical
permease YgbN K03299;
COG: COG2610 H+/gluconate symporter and related permeases;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="putative permease"
/protein_id="YP_001569468.1"
/db_xref="GI:161502356"
/db_xref="InterPro:IPR004680"
/db_xref="GeneID:5760627"
/translation="MLKEALYMTSISTLGAIAALVVAIVLILRRVSPAYGMMAGALVG
GLIGGADLLQTVSLMVSGAQGIVNAVLRILAAGVLAGVLIESGAANTIAETVVRKVGE
TRALLALAIATLCLTAVGVFIDVAVITVAPIALSIARNADLSKSAILLAMIGGGKAGN
VMSPNPNAIAASDAFHVPLTSIMLAGVVPGIVGLIIAYLLAKRLNNKGVGVADHEVTH
HDDTVARPGFLVAISAPLVAIFLLSLRPFAGISIDPLIALPVGGLVGLLLMGRARHCN
QYMVAGLMRMAPVAIMLLGTGTLAGIIANSELKDVLIHGLTASGLPSWLLAPVSGAMM
SMATASTTAGTAVASGVFSPTLLELGVSALAGAAMIHAGATVLDHLPHGSFFHATGGS
VNMQIHERLKLMPYETLVGLTITFISTLMFGFFGFAG"
misc_feature 391733..392848
/locus_tag="SARI_00389"
/note="H+/gluconate symporter and related permeases
[Carbohydrate transport and metabolism / Amino acid
transport and metabolism]; Region: GntT; COG2610"
/db_xref="CDD:225330"
misc_feature 391739..>392194
/locus_tag="SARI_00389"
/note="fructuronate transporter; Provisional; Region:
PRK10034; cl15264"
/db_xref="CDD:246912"
gene 392869..394008
/locus_tag="SARI_00390"
/db_xref="GeneID:5760628"
CDS 392869..394008
/locus_tag="SARI_00390"
/inference="protein motif:HMMPanther:IPR004381"
/inference="protein motif:HMMPfam:IPR004381"
/inference="protein motif:HMMTigr:IPR004381"
/inference="similar to AA sequence:REFSEQ:YP_149701.1"
/note="'KEGG: spt:SPA0377 4.9e-194 putative glycerate
kinase K00865;
COG: COG1929 Glycerate kinase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569469.1"
/db_xref="GI:161502357"
/db_xref="InterPro:IPR004381"
/db_xref="GeneID:5760628"
/translation="MKIVIAPDSFKESLSAMAVAEAIEKGFREIYPDADYVKVPMADG
GEGTVQSMVEASGGRYVDQWVQGPLGQPVTARWGMLGDSDTAVIEMAAASGLHHVSPE
LRNPLNTTSYGTGELIVAALERGVKRIILGIGGSATNDGGAGMMQALGVILRDKQGRS
LPPGGEALAALASIDLSGCHPLLRQVSITVACDVNNPLCGPQGASAVFGPQKGATAEM
MDTLDAALENWGRHIYLATGREVVNAPGAGAAGGMGAALLGLLNAELRAGVEIVVETL
QLEQAVEDADLVITGEGRLDSQSICGKTPIGVARVAKRYNKPVIALAGGLQHDHHVVY
QQGIDAALSILSHIVTLPEALHEAEYNLSLSARNVAAIWRLARQA"
misc_feature 392869..394002
/locus_tag="SARI_00390"
/note="Glycerate kinase [Carbohydrate transport and
metabolism]; Region: COG1929"
/db_xref="CDD:224840"
gene complement(394053..394523)
/gene="bcp"
/locus_tag="SARI_00391"
/db_xref="GeneID:5760629"
CDS complement(394053..394523)
/gene="bcp"
/locus_tag="SARI_00391"
/inference="protein motif:Gene3D:IPR012335"
/inference="protein motif:HMMPfam:IPR013740"
/inference="protein motif:superfamily:IPR012336"
/inference="similar to AA sequence:INSD:AAO68086.1"
/note="bacterioferritin comigratory protein; thiol
peroxidase; thioredoxin-dependent; hydroperoxide
peroxidase; in Escherichia coli this enzyme preferentially
reduces linoleic acid hydroperoxide; contains an active
site cysteine"
/codon_start=1
/transl_table=11
/product="thioredoxin-dependent thiol peroxidase"
/protein_id="YP_001569470.1"
/db_xref="GI:161502358"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="InterPro:IPR013740"
/db_xref="GeneID:5760629"
/translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP
GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDENHQVCEQ
FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFNDFKTSNHHDVVLNWLKENA"
misc_feature complement(<394119..394505)
/gene="bcp"
/locus_tag="SARI_00391"
/note="Peroxiredoxin [Posttranslational modification,
protein turnover, chaperones]; Region: AhpC; COG0450"
/db_xref="CDD:223527"
misc_feature complement(394074..394502)
/gene="bcp"
/locus_tag="SARI_00391"
/note="Peroxiredoxin (PRX) family, Bacterioferritin
comigratory protein (BCP) subfamily; composed of
thioredoxin-dependent thiol peroxidases, widely expressed
in pathogenic bacteria, that protect cells against
toxicity from reactive oxygen species by reducing...;
Region: PRX_BCP; cd03017"
/db_xref="CDD:239315"
misc_feature complement(order(394161..394163,394386..394388,
394395..394397))
/gene="bcp"
/locus_tag="SARI_00391"
/note="catalytic triad [active]"
/db_xref="CDD:239315"
gene complement(394523..395095)
/locus_tag="SARI_00392"
/db_xref="GeneID:5760630"
CDS complement(394523..395095)
/locus_tag="SARI_00392"
/inference="protein motif:HMMPfam:IPR002912"
/inference="similar to AA sequence:REFSEQ:NP_461425.1"
/note="'KEGG: eci:UTI89_C2806 1.2e-66 gcvR; glycine
cleavage system transcriptional repressor K03567;
COG: COG2716 Glycine cleavage system regulatory protein;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569471.2"
/db_xref="GI:448236193"
/db_xref="InterPro:IPR002912"
/db_xref="GeneID:5760630"
/translation="MTPSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
GDEFTFIMLLSGTWNAITLIESTLPLKGAELDLLIVMKRTSDRPRPAMPATVWVQVEV
ADSPHLIERFTALFDSHEMNIAELVSRTQPAEGDKAAQLFIQITAHSPASQNSANIEQ
AFKALCTELNAQGSINVVNYSQHDEQDGVK"
misc_feature complement(394526..395095)
/locus_tag="SARI_00392"
/note="glycine cleavage system transcriptional repressor;
Provisional; Region: gcvR; PRK11589"
/db_xref="CDD:236935"
misc_feature complement(394844..395074)
/locus_tag="SARI_00392"
/note="ACT domains that comprise the Glycine Cleavage
System Transcriptional Repressor (GcvR) protein, and other
related domains; Region: ACT_GcvR_1; cd04893"
/db_xref="CDD:153165"
misc_feature complement(394568..394804)
/locus_tag="SARI_00392"
/note="ACT domains are commonly involved in specifically
binding an amino acid or other small ligand leading to
regulation of the enzyme; Region: ACT; cl09141"
/db_xref="CDD:245020"
gene 395241..396119
/locus_tag="SARI_00393"
/db_xref="GeneID:5760631"
CDS 395241..396119
/locus_tag="SARI_00393"
/inference="protein motif:BlastProDom:IPR002220"
/inference="protein motif:FPrintScan:IPR002220"
/inference="protein motif:Gene3D:IPR013785"
/inference="protein motif:HMMPfam:IPR002220"
/inference="protein motif:HMMPIR:IPR002220"
/inference="protein motif:HMMTigr:IPR005263"
/inference="protein motif:ScanRegExp:IPR002220"
/inference="similar to AA sequence:INSD:AAX66390.1"
/note="catalyzes the formation of dihydrodipicolinate from
L-aspartate 4-semialdehyde and pyruvate in lysine and
diaminopimelate biosynthesis"
/codon_start=1
/transl_table=11
/product="dihydrodipicolinate synthase"
/protein_id="YP_001569472.1"
/db_xref="GI:161502360"
/db_xref="InterPro:IPR002220"
/db_xref="InterPro:IPR005263"
/db_xref="InterPro:IPR013785"
/db_xref="GeneID:5760631"
/translation="MFTGSIVALVTPMDEKGNVSRSCLKKLIDYHVANGTSAIVSVGT
TGESATLSHDEHGDVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGVVGCLT
VTPYYNRPTQEGLFQHFKAIAEHTDLPQILYNVPSRTGCDMLPETVGRLAEIKNIIAI
KEATGNLTRVHQIKELVSDDFILLSGDDASALDFMQLGGHGVISVTANVAARDMADMC
KLAAEGQFTEARVINQRLMPLHNKLFVEPNPIPVKWACKALGLVATDTLRLPMTPITD
NGRDIVKAALQHAGLL"
misc_feature 395244..396098
/locus_tag="SARI_00393"
/note="Dihydrodipicolinate synthase (DHDPS); Region:
DHDPS; cd00950"
/db_xref="CDD:188637"
misc_feature 395250..396107
/locus_tag="SARI_00393"
/note="dihydrodipicolinate synthase; Region: dapA;
TIGR00674"
/db_xref="CDD:129757"
misc_feature order(395367..395381,395478..395480,395484..395486,
395553..395561,395646..395648,395652..395654,
395982..395987,396042..396044,396048..396050)
/locus_tag="SARI_00393"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:188637"
misc_feature order(395370..395375,395637..395639,395652..395654,
395721..395723,395796..395798,395802..395804)
/locus_tag="SARI_00393"
/note="active site"
/db_xref="CDD:188637"
misc_feature 395721..395723
/locus_tag="SARI_00393"
/note="catalytic residue [active]"
/db_xref="CDD:188637"
gene 396136..397170
/locus_tag="SARI_00394"
/db_xref="GeneID:5760632"
CDS 396136..397170
/locus_tag="SARI_00394"
/inference="protein motif:HMMPfam:IPR010653"
/inference="protein motif:ScanRegExp:IPR001360"
/inference="similar to AA sequence:REFSEQ:NP_461423.1"
/note="'COG: COG3317 Uncharacterized lipoprotein;
Psort location: golgi, score: 9'"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_001569473.1"
/db_xref="GI:161502361"
/db_xref="InterPro:IPR001360"
/db_xref="InterPro:IPR010653"
/db_xref="GeneID:5760632"
/translation="MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDESYLDA
APLAELHAPAGMILPITTGDYVIPVTKGSGAVGKALDIRPPAQPLALVSGARTQFSGD
TATLLVENGRSSTLWPQVVSVIQAKNYPIEKRDDASQTLMTDWVNWNRLDEDEQYRGR
YQISVKPQGYQQAVTVKLVNLEQAGKPVADAASLQRYSTEMMNVISAGLDKTATDAAN
AAQSRSAATMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKAGMKVTDSTRSQGSM
AVTYKPLSDSDWRELGASDPGLPSGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL
VAVFQAAFNK"
misc_feature 396136..397167
/locus_tag="SARI_00394"
/note="lipoprotein; Provisional; Region: PRK11679"
/db_xref="CDD:236955"
misc_feature 396253..397161
/locus_tag="SARI_00394"
/note="NlpB/DapX lipoprotein; Region: Lipoprotein_18;
pfam06804"
/db_xref="CDD:219182"
gene 397356..398069
/locus_tag="SARI_00395"
/db_xref="GeneID:5760633"
CDS 397356..398069
/locus_tag="SARI_00395"
/inference="protein motif:BlastProDom:IPR001636"
/inference="protein motif:Gene3D:IPR013816"
/inference="protein motif:HMMPanther:IPR001636"
/inference="protein motif:HMMPfam:IPR001636"
/inference="protein motif:HMMTigr:IPR001636"
/inference="protein motif:ScanRegExp:IPR001636"
/inference="similar to AA sequence:INSD:AAV76394.1"
/note="catalyzes the formation of
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-
carboxamido)succinate from
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and
L-aspartate in purine biosynthesis; SAICAR synthase"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole-succinocarboxamide
synthase"
/protein_id="YP_001569474.1"
/db_xref="GI:161502362"
/db_xref="InterPro:IPR001636"
/db_xref="InterPro:IPR013816"
/db_xref="GeneID:5760633"
/translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEKFD
RKGMVNNKFNHFIMTKLAEAGIPTQMERLLSDTECLVKKLEMVPVECVVRNRAAGSLV
KRLGVEEGMELNPPIFDLFLKNDALHDPMVNSSYCETFGWVSQENLARMKALTYKAND
VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLDKMDKDRFRQSL
GGLIEAYEAVARRLGVKLD"
misc_feature 397356..398066
/locus_tag="SARI_00395"
/note="phosphoribosylaminoimidazole-succinocarboxamide
synthase; Reviewed; Region: PRK09362"
/db_xref="CDD:181800"
misc_feature 397374..398054
/locus_tag="SARI_00395"
/note="bacterial and archaeal
5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide
(SAICAR) synthase; Region: SAICAR_synt_PurC; cd01415"
/db_xref="CDD:133470"
misc_feature order(397374..397379,397383..397388,397392..397394,
397398..397403,397425..397427,397431..397433,
397560..397562,397599..397601,397605..397607,
397611..397613,397722..397724,397890..397892,
397923..397928)
/locus_tag="SARI_00395"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:133470"
misc_feature order(397377..397379,397383..397394,397398..397400,
397425..397427,397461..397463,397563..397565,
397596..397607,397611..397613,397623..397625,
397629..397631,397635..397637,397647..397655,
397716..397718,397722..397724,397740..397742,
397878..397886,397890..397892,397926..397928,
397941..397952)
/locus_tag="SARI_00395"
/note="active site"
/db_xref="CDD:133470"
misc_feature order(397461..397463,397623..397625,397629..397631,
397635..397637,397647..397655,397716..397718,
397740..397742,397878..397886,397941..397952)
/locus_tag="SARI_00395"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133470"
gene 398269..399063
/locus_tag="SARI_00396"
/db_xref="GeneID:5760634"
CDS 398269..399063
/locus_tag="SARI_00396"
/inference="protein motif:HMMPfam:IPR007343"
/inference="protein motif:ScanRegExp:IPR006025"
/inference="similar to AA sequence:INSD:AAV76395.1"
/note="'KEGG: eci:UTI89_C2802 1.4e-134 ypfJ; hypothetical
protein;
COG: COG2321 Predicted metalloprotease;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569475.1"
/db_xref="GI:161502363"
/db_xref="InterPro:IPR006025"
/db_xref="InterPro:IPR007343"
/db_xref="GeneID:5760634"
/translation="MGGPGFRLPRGKGGIILLVVVLVAGYYGVDLTSLLTGQPVSQQQ
STRSISPNDDEAAKFTSVILATTEDTWGQLFQKMGRGYQQPKLVMYRGMTRTGCGAGQ
SVMGPFYCPADGTVYIDLSFYDDMKNKLGADGDFAQGYVIAHEVGHHVQKLLGIEPKV
RQLQQNASQTEVNRLSVRMELQADCFAGVWGHSMQQQGVLEAGDLEEALNAAQAIGDD
RLQQQGQGRVVPDSFTHGTSEQRYSWFKRGFDSGDPAQCNTFGKNF"
misc_feature 398269..399060
/locus_tag="SARI_00396"
/note="Predicted metalloprotease [General function
prediction only]; Region: COG2321"
/db_xref="CDD:225203"
misc_feature 398272..399048
/locus_tag="SARI_00396"
/note="Putative neutral zinc metallopeptidase; Region:
Zn_peptidase; pfam04228"
/db_xref="CDD:217975"
gene 399079..401097
/locus_tag="SARI_00397"
/db_xref="GeneID:5760635"
CDS 399079..401097
/locus_tag="SARI_00397"
/inference="protein motif:HMMPfam:IPR000182"
/inference="protein motif:HMMPfam:IPR007807"
/note="'COG: COG1444 Predicted P-loop ATPase fused to an
acetyltransferase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569476.1"
/db_xref="GI:161502364"
/db_xref="InterPro:IPR000182"
/db_xref="InterPro:IPR007807"
/db_xref="GeneID:5760635"
/translation="MSDIDALQALTSQMIQEGIRRLLVISGDAAWCRERAEAMRAALP
GDWLWVAPDAPAEPRCTPQALQMLLGREFRHAIFDAWQGFDAAAFAALSGTLQAGSWL
LLLMPPYEAWECRPDTDSLRWSDCAQPIPTPQFAQHLKRTLSRDPQTLLWRQNLPFCW
PSYPARERWRPATGEPQPDQAAILSRLLEMPPGVATVIAARGRGKSALAGQFISQMTG
TAIVTAPAKSATDILATFAGGRFCFIAPDALLASEARADWLVVDEAAAIPAPLLLQLV
SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPQLHRFTLRQPVRWAPECPLENIVSEAL
IFDDEAFAQAPHGAIAISAFYQQAWGETPALPRAVYQLLSGAHYRTSPLDLRRMMDAP
GQHFLQATANNRVAGALWLVEEGGLSAELSQAVWCGFRRPRGNLVAQSLAAHGSDPLA
ATLVGRRVSRIAVHPARQREGIGQQLIACACVQAAQCDYLSVSFGYTPELWRFWQRCG
FVLVRMGNHREASSGCYTAMALLPLSDAGKRLAQQEHRRLRRDADILTQWNGEAIPLA
ALREQALDDEDWRELVGFAFAHRPLLTSLGCLHRLLQYSALPLPALRGRLEEKASDAE
LCARLHVSGRKALLALQRAQAAQAVIALDAGRTQRLRDVMPGGENHAG"
misc_feature 399079..400983
/locus_tag="SARI_00397"
/note="Predicted P-loop ATPase fused to an
acetyltransferase [General function prediction only];
Region: COG1444"
/db_xref="CDD:224361"
misc_feature 399700..400086
/locus_tag="SARI_00397"
/note="Helicase; Region: Helicase_RecD; pfam05127"
/db_xref="CDD:218449"
misc_feature 400183..400680
/locus_tag="SARI_00397"
/note="GNAT acetyltransferase 2; Region: GNAT_acetyltr_2;
pfam13718"
/db_xref="CDD:222340"
misc_feature 400720..400983
/locus_tag="SARI_00397"
/note="Possible tRNA binding domain; Region: tRNA_bind_2;
pfam13725"
/db_xref="CDD:222344"
gene complement(401124..401324)
/locus_tag="SARI_00398"
/db_xref="GeneID:5760636"
CDS complement(401124..401324)
/locus_tag="SARI_00398"
/inference="similar to AA sequence:SwissProt:Q8XF02"
/note="'COG: NOG13899 non supervised orthologous group;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569477.1"
/db_xref="GI:161502365"
/db_xref="GeneID:5760636"
/translation="MDWLAKYWWILVLVFLVGVLLNVIKDLKRIDHKKFLANKPELPP
HRDFNDKWDDEDDWPKKDQSKK"
misc_feature complement(<401178..401324)
/locus_tag="SARI_00398"
/note="hypothetical protein; Provisional; Region:
PRK13664"
/db_xref="CDD:184221"
gene complement(401352..402479)
/locus_tag="SARI_00399"
/db_xref="GeneID:5760637"
CDS complement(401352..402479)
/locus_tag="SARI_00399"
/inference="protein motif:HMMPfam:IPR002933"
/inference="protein motif:HMMPfam:IPR011650"
/inference="protein motif:HMMTigr:IPR005941"
/inference="protein motif:ScanRegExp:IPR001261"
/inference="similar to AA sequence:REFSEQ:NP_461418.1"
/note="'dapE-encoded N-succinyl-L,L-diaminopimelic acid
desuccinylase (DapE), catalyzes the hydrolysis of
N-succinyl-L,Ldiaminopimelate L,L-SDAP to
L,L-diaminopimelate and succinate. It is a metalloprotease
containing dinuclear active sites. Its structure is
similar to the carboxypeptidase G2 from Pseudomonas sp.
strain RS-16 and the aminopeptidase from Aeromonas
proteolytica.'"
/codon_start=1
/transl_table=11
/product="succinyl-diaminopimelate desuccinylase"
/protein_id="YP_001569478.1"
/db_xref="GI:161502366"
/db_xref="InterPro:IPR001261"
/db_xref="InterPro:IPR002933"
/db_xref="InterPro:IPR005941"
/db_xref="InterPro:IPR011650"
/db_xref="GeneID:5760637"
/translation="MSCPVIELTQQLIRRPSLSPDDAGCQALMIERLRKIGFTIEHMD
FGDTQNFWAWRGRGETLAFAGHTDVVPAGDVDRWINPPFEPTIRDGMLFGRGAADMKG
SLAAMVVAAERFVAQHPHHRGRLAFLITSDEEASAKNGTVKVVEALMARNERLDYCLV
GEPSSTEIVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
WDRGNDFFPATSMQVANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKERVHALLE
KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAIEHYNEIKPQLLTTGGTSDGRFIARMG
AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA"
misc_feature complement(401355..402476)
/locus_tag="SARI_00399"
/note="succinyl-diaminopimelate desuccinylase; Reviewed;
Region: PRK13009"
/db_xref="CDD:237265"
misc_feature complement(401370..402464)
/locus_tag="SARI_00399"
/note="M20 Peptidase proteobacterial DapE encoded
N-succinyl-L,L-diaminopimelic acid desuccinylase; Region:
M20_DapE_proteobac; cd03891"
/db_xref="CDD:193511"
misc_feature complement(order(401436..401438,401994..401996,
402078..402083,402183..402185,402282..402284))
/locus_tag="SARI_00399"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193511"
misc_feature complement(order(401514..401516,401709..401711,
401715..401717,401739..401744,401763..401786,
401790..401792,401835..401837,401844..401849,
401853..401858,401865..401870,401874..401876,
401892..401903,401934..401936))
/locus_tag="SARI_00399"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:193511"
gene complement(402483..402839)
/locus_tag="SARI_00400"
/db_xref="GeneID:5760638"
CDS complement(402483..402839)
/locus_tag="SARI_00400"
/inference="protein motif:Gene3D:IPR012335"
/inference="protein motif:HMMPfam:IPR006660"
/inference="protein motif:HMMTigr:IPR006504"
/inference="protein motif:superfamily:IPR012336"
/inference="similar to AA sequence:INSD:CAD02682.1"
/note="'KEGG: eci:UTI89_C2797 7.4e-49 yffB; conserved
THIoredoxin-like protein;
COG: COG1393 Arsenate reductase and related proteins,
glutaredoxin family;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569479.1"
/db_xref="GI:161502367"
/db_xref="InterPro:IPR006504"
/db_xref="InterPro:IPR006660"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="GeneID:5760638"
/translation="MITLYGIKNCDTIKKARRWLEEHGIDYRFHDYRVDGIDLSLINT
FIAELGWQPLLNTRGTTWRKLDEGDRSGITDADSAAALMVEQPAIIKRPLLCAPGKPM
LLGFSESRYQQFFDEV"
misc_feature complement(402516..402836)
/locus_tag="SARI_00400"
/note="Arsenate Reductase (ArsC) family, Yffb subfamily;
Yffb is an uncharacterized bacterial protein encoded by
the yffb gene, related to the thioredoxin-fold arsenic
reductases, ArsC. The structure of Yffb and the
conservation of the catalytic cysteine...; Region:
ArsC_Yffb; cd03035"
/db_xref="CDD:239333"
misc_feature complement(402498..402827)
/locus_tag="SARI_00400"
/note="ArsC family; Region: ArsC; pfam03960"
/db_xref="CDD:202832"
misc_feature complement(order(402522..402524,402564..402566,
402672..402674,402810..402812))
/locus_tag="SARI_00400"
/note="putative catalytic residues [active]"
/db_xref="CDD:239333"
gene complement(403413..406526)
/locus_tag="SARI_00401"
/db_xref="GeneID:5760639"
CDS complement(403413..406526)
/locus_tag="SARI_00401"
/inference="protein motif:FPrintScan:IPR001036"
/inference="protein motif:HMMPfam:IPR001036"
/inference="protein motif:HMMTigr:IPR004764"
/note="'KEGG: eci:UTI89_C2351 3.6e-111 yegO; hypothetical
protein YegO K07789;
COG: COG0841 Cation/multidrug efflux pump;
Psort location: plasma membrane, score: 23'"
/codon_start=1
/transl_table=11
/product="aminoglycoside/multidrug efflux system"
/protein_id="YP_001569480.1"
/db_xref="GI:161502368"
/db_xref="InterPro:IPR001036"
/db_xref="InterPro:IPR004764"
/db_xref="GeneID:5760639"
/translation="MANFFIDRPIFAWVLAILLCLTGALAIFSLPVEQYPDLAPPNVR
ITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGTGQATITLSFIAGTDPDE
AVQQVQNQLQSAMRKLPQAVQDQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS
NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIASQNAQIAVGQ
LGGTPSVDKQALNATINAQSLLQTPQQFRDITLRVNQDGSEVQLGDVATVEMGAEKYD
HLSRFNGNPASGLGVKLASGANEMATAKLVLDRLNELAQYFPHGLEYKIAYETTSFVK
ASIIDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINT
LTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLS
AVFVPMAFFGGTTGAIYRQFSITIVSAMVLSVLVAMILTPALCATLLKPLRKGEQHGQ
TGFFGWFNRTFNRNAERYEKSVAKILHRSLRWILIYVLLLGGMVFLFLRLPTSFLPQE
DRGMFTTSIQLPSGSTQQQTLKVVEKVENYYFTHEKDNIMSVFSTVGSGPGGNGQNVA
RMFVRLKDWDARDPTTGTSFAIIERATKAFSQIKEARIFASSPPAISGLGSSAGFDME
LQDHAGAGHDALMAARDQLIELAGKNSSLTRVRHNGLDDSPQLQIDIDQRKAQALGVS
IDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAKYRMLPDDINLWYVRNKDGGMVP
FSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDTMESLVHQLPGGFGLE
WTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLAT
WMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHSLLDATLHASRQRLRPI
LMTSLAFIFGVLPMATSNGAGSGSQHAVGTGVMGGMISATILAIFFVPLFFVLIRRRF
PLKPRPE"
misc_feature complement(403416..406526)
/locus_tag="SARI_00401"
/note="aminoglycoside/multidrug efflux system;
Provisional; Region: PRK10555"
/db_xref="CDD:182544"
misc_feature complement(405072..>405536)
/locus_tag="SARI_00401"
/note="Protein export membrane protein; Region: SecD_SecF;
cl14618"
/db_xref="CDD:246677"
gene complement(406716..408413)
/locus_tag="SARI_00402"
/db_xref="GeneID:5760640"
CDS complement(406716..408413)
/locus_tag="SARI_00402"
/inference="protein motif:Gene3D:IPR003594"
/inference="protein motif:HMMPfam:IPR003594"
/inference="protein motif:HMMPfam:IPR003660"
/inference="protein motif:HMMPfam:IPR011712"
/inference="protein motif:HMMSmart:IPR003594"
/inference="protein motif:HMMSmart:IPR003660"
/inference="protein motif:superfamily:IPR003594"
/inference="similar to AA sequence:INSD:AAL21374.1"
/note="'KEGG: stm:STM2480 2.8e-285 narQ; sensory histidine
kinase in two-component regulatory system with NarP (
NarL) K07674;
COG: COG3850 Signal transduction histidine kinase,
nitrate/nitrite-specific;
Psort location: endoplasmic reticulum, score: 9'"
/codon_start=1
/transl_table=11
/product="nitrate/nitrite sensor protein NarQ"
/protein_id="YP_001569481.1"
/db_xref="GI:161502369"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR011712"
/db_xref="GeneID:5760640"
/translation="MTVKRPVSASLAKAFFYIVLLSILSTGSALLTLTSSLRDAEAIN
IAGSLRMQSYRLGYDLQSRSPQINAHRQLFQHALNSPVLRNLNAWYVPQAVKNRYARL
HANWLEMNSRLQGGDIAWYQTNINNYVDQIDLFVLALQHYAERKVMLVVAISLAGGIG
IFTLVFFTLRRIRQQVVRPLNQLVTASQRIEHGQFAPLPLDTSLSNELGLLAKTFSQM
SSELHKLYRSLEASVEEKTRDLHEAHRRLEVLYQCSQALNTSQIDVHCFRHILRIVRE
HDAAWYLKLTVGDNWRISEGTQRPNLPVQILPVTMQDTVYGELHWQSPNVDASTPLLN
SVSTMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRAIP
EDNACAQSIMTDFSRALNDAYRQLRELLTTFRLTLQQADLPSALHEMLEDLQSQTPAK
LTLDCRLPTLALDAQMQVHLLQIVREAVLNAIKHANATEIAVSCVTAPDGDHTVYIHD
NGIGIGEPHEPVGHYGLNIMRERAERLGGTLNFSQPSGGGTLVSISFRSSSGEDIAS"
misc_feature complement(406725..408413)
/locus_tag="SARI_00402"
/note="nitrate/nitrite sensor protein NarQ; Provisional;
Region: PRK10935"
/db_xref="CDD:236800"
misc_feature complement(408015..408302)
/locus_tag="SARI_00402"
/note="Type IV pili methyl-accepting chemotaxis transducer
N-term; Region: PilJ; pfam13675"
/db_xref="CDD:222310"
misc_feature complement(407742..407888)
/locus_tag="SARI_00402"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(407748..407753,407760..407765,
407769..407774,407781..407786,407790..407795,
407844..407846,407850..407855,407862..407867,
407871..407876,407883..407888))
/locus_tag="SARI_00402"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(407175..407333)
/locus_tag="SARI_00402"
/note="Histidine kinase; Region: HisKA_3; pfam07730"
/db_xref="CDD:219540"
misc_feature complement(406749..407006)
/locus_tag="SARI_00402"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature complement(order(406761..406763,406767..406772,
406785..406787,406791..406793,406839..406847,
406875..406880,406884..406886,406890..406892,
406896..406898,406965..406967,406974..406976,
406986..406988))
/locus_tag="SARI_00402"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(406974..406976)
/locus_tag="SARI_00402"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(order(406842..406844,406878..406880,
406884..406886))
/locus_tag="SARI_00402"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene complement(408574..408822)
/locus_tag="SARI_00403"
/db_xref="GeneID:5760641"
CDS complement(408574..408822)
/locus_tag="SARI_00403"
/note="'Psort location: mitochondrial, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569482.1"
/db_xref="GI:161502370"
/db_xref="GeneID:5760641"
/translation="MSDRAVRTATGAGRILAMMTCYRAALMLMFDDSNSGLIALWRQY
MSLIIVSHYTGDLAGMAPQALLAIGHNKTIHGVLLFWL"
gene 408598..410559
/locus_tag="SARI_00404"
/db_xref="GeneID:5760642"
CDS 408598..410559
/locus_tag="SARI_00404"
/inference="protein motif:BlastProDom:IPR001327"
/inference="protein motif:FPrintScan:IPR000759"
/inference="protein motif:FPrintScan:IPR001100"
/inference="protein motif:FPrintScan:IPR013027"
/inference="protein motif:HMMPfam:IPR001327"
/inference="protein motif:HMMPfam:IPR013027"
/inference="protein motif:HMMTigr:IPR006006"
/inference="protein motif:superfamily:IPR009051"
/inference="similar to AA sequence:INSD:AAL21373.1"
/note="'unknown function; in E. coli the aegA gene is
regulated by Fnr, NarXL, and NarQ (but not ArcA), induced
under anaerobic conditions and repressed in the presence
of nitrate (anaerobic)'"
/codon_start=1
/transl_table=11
/product="oxidoreductase Fe-S binding subunit"
/protein_id="YP_001569483.2"
/db_xref="GI:448236194"
/db_xref="InterPro:IPR000759"
/db_xref="InterPro:IPR001100"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR006006"
/db_xref="InterPro:IPR009051"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:5760642"
/translation="MNRFIMANSQQCLGCHACEVACVMAHNDERHVLTPQRYQPRITV
IKHQHQRSAVTCHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFGTM
QMILTPVASNQFKASAHKCDLCQGRENGPACVENCPADALQLITEASLTRLAKTRRLR
TARQEIRPWHTVDTERSGATRSKVERMQATPPRGEPDKLAIEARKTTFEEIYLPFRTV
QAEREAARCLTCGEHSICEWTCPLHNHIPQWIELVKAGDIDAAVALSHQTNCLPEITG
RVCPQDRLCEGACTLRDEYGAVTIGNIERYISDRALSKGWRPDLSDVQKIDKRVAIIG
AGPAGLACADVLARNGVSATVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGI
RFELNCEVGKDISLATLLETYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTK
QVMGLSESPDAPFIDTADLNVVVLGGGDTAMDCVRTALRHGAAKVTCAYRRDEANMPG
SKKEVKNAREEGANFEFNVQPVELVLDTQGRVSGIRFLRTQLGEPDGQGRRRPVPVPG
SEFVMPADAVIMAFGFHPHGMPWLESHGVKVDDWGRIAASVESAFRYQTSNPKIFAGG
DAVRGADLVATAMAEGRHAAQGMLDWFGK"
misc_feature 408598..410556
/locus_tag="SARI_00404"
/note="putative oxidoreductase Fe-S binding subunit;
Reviewed; Region: PRK12769"
/db_xref="CDD:183733"
misc_feature 408835..408897
/locus_tag="SARI_00404"
/note="4Fe-4S binding domain; Region: Fer4; pfam00037"
/db_xref="CDD:215671"
misc_feature 409591..>409725
/locus_tag="SARI_00404"
/note="NAD(P)-binding Rossmann-like domain; Region:
NAD_binding_8; pfam13450"
/db_xref="CDD:205628"
misc_feature 410005..410217
/locus_tag="SARI_00404"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:215691"
gene complement(410933..411357)
/locus_tag="SARI_00405"
/note="Pseudogene compared to gi|16765798|ref|NP_461413.1|
hypothetical protein STM2478 [Salmonella typhimurium LT2]"
/db_xref="GeneID:5760643"
gene 411411..412013
/locus_tag="SARI_00406"
/db_xref="GeneID:5760644"
CDS 411411..412013
/locus_tag="SARI_00406"
/inference="protein motif:Gene3D:IPR000086"
/inference="protein motif:HMMPfam:IPR000086"
/inference="protein motif:HMMTigr:IPR004385"
/inference="protein motif:superfamily:IPR000086"
/inference="similar to AA sequence:REFSEQ:NP_457011.1"
/note="'KEGG: eci:UTI89_C2793 7.2e-90 yffH; hypothetical
protein YffH K01515;
COG: COG0494 NTP pyrophosphohydrolases including oxidative
damage repair enzymes;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569484.1"
/db_xref="GI:161502372"
/db_xref="InterPro:IPR000086"
/db_xref="InterPro:IPR004385"
/db_xref="GeneID:5760644"
/translation="MFLLHPGASMSQNITLIKDKILSDNYFTLRNITYDLTRRNGKVI
RHKREVYDRGNGATILLYNSTKKTVVLVRQFRVATWVNGNEDGMLIETCAGLLDNDEP
EVCIRKEAIEETGYDVGEVRKIFELYMSPGGVTELIHFFIAEYRDSERASTGGGVEDE
DIEVLELPFSRALEMARSGEIRDGKTVLLLNYLHMSHLMG"
misc_feature 411438..412007
/locus_tag="SARI_00406"
/note="GDP-mannose pyrophosphatase NudK; Provisional;
Region: PRK15009"
/db_xref="CDD:184971"
misc_feature 411567..412001
/locus_tag="SARI_00406"
/note="ADP-ribose pyrophosphatase (ADPRase) catalyzes the
hydrolysis of ADP-ribose and a variety of additional
ADP-sugar conjugates to AMP and ribose-5-phosphate. Like
other members of the Nudix hydrolase superfamily, it
requires a divalent cation, such as Mg2+; Region:
ADPRase_NUDT5; cd03424"
/db_xref="CDD:239516"
misc_feature order(411567..411569,411573..411575,411627..411629,
411633..411635,411639..411641,411672..411674,
411786..411797,411801..411803,411807..411821,
411888..411893,411897..411899,411936..411941,
411963..411965,411975..411977,411984..411986,
411996..412001)
/locus_tag="SARI_00406"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:239516"
misc_feature order(411576..411578,411636..411638,411696..411698,
411735..411737,411747..411749,411816..411818)
/locus_tag="SARI_00406"
/note="ADP-ribose binding site [chemical binding]; other
site"
/db_xref="CDD:239516"
misc_feature order(411636..411638,411690..411698,411735..411737,
411747..411749,411816..411818,411888..411890)
/locus_tag="SARI_00406"
/note="active site"
/db_xref="CDD:239516"
misc_feature order(411693..411704,411708..411713,411714..411758)
/locus_tag="SARI_00406"
/note="nudix motif; other site"
/db_xref="CDD:239516"
misc_feature order(411735..411737,411747..411749,411888..411890)
/locus_tag="SARI_00406"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:239516"
gene 412138..413181
/locus_tag="SARI_00407"
/db_xref="GeneID:5760645"
CDS 412138..413181
/locus_tag="SARI_00407"
/inference="protein motif:HMMPfam:IPR009560"
/inference="similar to AA sequence:INSD:AAL21370.1"
/note="'COG: NOG06758 non supervised orthologous group;
Psort location: extracellular, including cell wall, score:
9'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569485.1"
/db_xref="GI:161502373"
/db_xref="InterPro:IPR009560"
/db_xref="GeneID:5760645"
/translation="MRYRVILFCLLGLLPVQLLWAAPAQRTFSDWQVTCNNQHFCVAR
NTGEHHGLVMTLSRSAGARTDAVLRIDRGGLAPPDAKEAAIAPRLLLDGKPLSFNTPH
WRVSPWHLMTDDPATIIAFLQTIQDAQAITLKNGVQTLSLAGLKAALLFIDAQQKRVG
SETAWVEKGNEPPLSVPPAPALKGIAIINPTPVPLSEEERNDLLDYAAWRVNGIRCSL
DPLRREVQVSALTDNKALLIVNCEAGAYNTIDLAWIVSRKKTLVSRAVRLRLPFNRGV
ESKDMELMNAFFDEKTHELVTLAKGRGLTDCGIQTRWRYDGDRFRLVRYAEEPSCDNW
HGPDAWPTLWITR"
misc_feature 412177..413178
/locus_tag="SARI_00407"
/note="Protein of unknown function (DUF1176); Region:
DUF1176; pfam06674"
/db_xref="CDD:219130"
gene 413310..413540
/locus_tag="SARI_00408"
/db_xref="GeneID:5760646"
CDS 413310..413540
/locus_tag="SARI_00408"
/inference="similar to AA sequence:INSD:AAL21369.1"
/note="'COG: NOG31287 non supervised orthologous group;
Psort location: nuclear, score: 23'"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001569486.1"
/db_xref="GI:161502374"
/db_xref="GeneID:5760646"
/translation="MKINNGPVLCPHCGCLSAYYEIDRLAAIREKVNKEGGSKAWDST
LQAHKKKAFCLMCHKSIDEAVIGQSDAPESAR"
gene complement(413603..415603)
/locus_tag="SARI_00409"
/db_xref="GeneID:5760647"
CDS complement(413603..415603)
/locus_tag="SARI_00409"
/inference="protein motif:Gene3D:IPR009014"
/inference="protein motif:HMMPanther:IPR005478"
/inference="protein motif:HMMPfam:IPR005474"
/inference="protein motif:HMMPfam:IPR005475"
/inference="protein motif:HMMPfam:IPR005476"
/inference="protein motif:HMMPIR:IPR005478"
/inference="protein motif:HMMTigr:IPR005478"
/inference="protein motif:ScanRegExp:IPR005474"
/inference="protein motif:ScanRegExp:IPR005475"
/inference="protein motif:superfamily:IPR009014"
/note="'catalyzes the formation of ribose 5-phosphate and
xylulose 5-phosphate from sedoheptulose 7-phosphate and
glyceraldehyde 3-phosphate; can transfer ketol groups
between several groups; in Escherichia coli there are two
tkt genes, tktA expressed during exponential growth and
the tktB during stationary phase'"
/codon_start=1
/transl_table=11
/product="transketolase"
/protein_id="YP_001569487.1"
/db_xref="GI:161502375"
/db_xref="InterPro:IPR005474"
/db_xref="InterPro:IPR005475"
/db_xref="InterPro:IPR005476"
/db_xref="InterPro:IPR005478"
/db_xref="InterPro:IPR009014"
/db_xref="GeneID:5760647"
/translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
KHNPTDPAWYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
GYTPGVETTTGPLGQGLANAVGLAIAERTLGAQFNQPDHEIVDHYTYVFMGDGCLMEG
ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVVHDIDGH
DPEAVKKAILEARSVKDKPSLIICRTVIGFGSPNKAGKEESHGAALGEEEVALTRQKL
GWHHPAFEIPKEIYRAWDGREKGEKAQQRWQEKFAAYEKAYPELAAEFTRRMSGGLPE
AWESATQKFINDLQANPAKIATRKASQNTLNAYGPLLPELLGGSADLAPSNLTIWKGS
TSLKEDPAGNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALM
KARQIMVYTHDSIGLGEDGPTHQAVEQLASLRLTPNFSTWRPCDQVEAAVGWKLAIER
HHGPTALILSRQNLAQVERTPEQVKAIARGGYILKDSGGKPDIILIATGSEMEITLQA
AEKLTGEGHNVRVVSLPSTDIFDAQEEAYRESVLPSHVTARVAVEAGIADYWYKYVGL
KGAIIGMTGYGESAPADKLFPYFGFTVENIVEKARRVLSMKG"
misc_feature complement(413618..415603)
/locus_tag="SARI_00409"
/note="transketolase; Reviewed; Region: PRK12753"
/db_xref="CDD:183723"
misc_feature complement(414785..415582)
/locus_tag="SARI_00409"
/note="Thiamine pyrophosphate (TPP) family, Transketolase
(TK) subfamily, TPP-binding module; TK catalyzes the
transfer of a two-carbon unit from ketose phosphates to
aldose phosphates. In heterotrophic organisms, TK provides
a link between glycolysis and the...; Region: TPP_TK;
cd02012"
/db_xref="CDD:238970"
misc_feature complement(order(414824..414826,415040..415042,
415046..415048,415052..415054,415127..415129,
415139..415144,415259..415261,415265..415267,
415409..415411))
/locus_tag="SARI_00409"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:238970"
misc_feature complement(order(414995..414997,415040..415045,
415091..415093,415103..415105,415112..415117,
415124..415135,415253..415255,415259..415264,
415301..415303,415307..415312,415334..415336))
/locus_tag="SARI_00409"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238970"
misc_feature complement(414047..414532)
/locus_tag="SARI_00409"
/note="Pyrimidine (PYR) binding domain of
1-deoxy-D-xylulose-5-phosphate synthase (DXS),
transketolase (TK), and related proteins; Region:
TPP_PYR_DXS_TK_like; cd07033"
/db_xref="CDD:132916"
misc_feature complement(order(414074..414076,414140..414145,
414191..414193,414200..414202,414275..414280,
414287..414289,414344..414352,414356..414361,
414368..414385,414389..414391,414398..414400,
414464..414466,414482..414484,414488..414490))
/locus_tag="SARI_00409"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132916"
misc_feature complement(order(414149..414151,414155..414160,
414164..414169,414194..414196,414200..414202,
414281..414283,414287..414292,414374..414382,
414389..414391,414464..414466))
/locus_tag="SARI_00409"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132916"
misc_feature complement(order(414287..414289,414296..414298,
414374..414376,414380..414382))
/locus_tag="SARI_00409"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132916"
misc_feature complement(413642..413989)
/locus_tag="SARI_00409"
/note="Transketolase, C-terminal domain; Region:
Transketolase_C; pfam02780"
/db_xref="CDD:217227"
gene complement(415624..416574)
/locus_tag="SARI_00410"
/db_xref="GeneID:5760648"
CDS complement(415624..416574)
/locus_tag="SARI_00410"
/inference="protein motif:Gene3D:IPR013785"
/inference="protein motif:HMMPanther:IPR001585"
/inference="protein motif:HMMPfam:IPR001585"
/inference="protein motif:HMMTigr:IPR004730"
/inference="protein motif:ScanRegExp:IPR001585"
/inference="similar to AA sequence:SwissProt:Q8ZN83"
/note="'KEGG: stm:STM2473 9.0e-163 talA; transaldolase A
K00616;
COG: COG0176 Transaldolase;
Psort location: cytoplasmic, score: 23'"
/codon_start=1
/transl_table=11
/product="transaldolase A"
/protein_id="YP_001569488.1"
/db_xref="GI:161502376"
/db_xref="InterPro:IPR001585"
/db_xref="InterPro:IPR004730"
/db_xref="InterPro:IPR013785"
/db_xref="GeneID:5760648"
/translation="MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL
EQYSHLIEDAIAWGKKHGGTQEQQVTAASDKLAVNFGAEILKSIPGRVSTEIDARLSF
DKEKSIEKARHLVALYQQQNIDKSRILIKLAATWEGIRAAGQLEKEGINCNLTLLFSF
AQARACAEAGVYLISPFVGRIYDWYQARSPMDPYIVEEDPGVKSVRNIYDYFKQHRYE
TIVMGASFRRTEQILALTGCDRLTISPNLLKELKEKEEPVIRKLVPSSQMFHRPTPMT
EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL"
misc_feature complement(415627..416574)
/locus_tag="SARI_00410"
/note="transaldolase-like protein; Provisional; Region:
PTZ00411"
/db_xref="CDD:240406"
misc_feature complement(415639..416571)
/locus_tag="SARI_00410"
/note="Transaldolases including both TalA and TalB;
Region: Transaldolase_TalAB; cd00957"
/db_xref="CDD:188644"
misc_feature complement(order(416035..416037,416050..416052,
416110..416112,416116..416118,416182..416184,
416290..416292,416296..416298,416470..416475,
416479..416481,416527..416529))
/locus_tag="SARI_00410"
/note="active site"
/db_xref="CDD:188644"
misc_feature complement(order(415678..415680,415690..415692,
415699..415701,415717..415722,415732..415734,
415741..415743,416266..416268))
/locus_tag="SARI_00410"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:188644"
misc_feature complement(416182..416184)
/locus_tag="SARI_00410"
/note="catalytic residue [active]"
/db_xref="CDD:188644"
gene 416846..419125
/locus_tag="SARI_00411"
/db_xref="GeneID:5760649"
CDS 416846..419125
/locus_tag="SARI_00411"
/inference="protein motif:HMMPfam:IPR002505"
/inference="protein motif:HMMPfam:IPR012301"
/inference="protein motif:HMMPfam:IPR012302"
/inference="protein motif:HMMPIR:IPR012188"
/inference="protein motif:ScanRegExp:IPR001891"
/note="NADP-dependent; catalyzes the oxidative
decarboxylation of malate to form pyruvate; decarboxylates
oxaloacetate"
/codon_start=1
/transl_table=11
/product="malic enzyme"
/protein_id="YP_001569489.1"
/db_xref="GI:161502377"
/db_xref="InterPro:IPR001891"
/db_xref="InterPro:IPR002505"
/db_xref="InterPro:IPR012188"
/db_xref="InterPro:IPR012301"
/db_xref="InterPro:IPR012302"
/db_xref="GeneID:5760649"
/translation="MDEQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
APCLEIEKDPLAAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
GIDVFDIEVDELDPDKFINVVAALEPTFGGVNLEDIKAPECFYIEQKLRERMNIPVFH
DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGMQKHNIVV
CDSKGVIYKGREPNMAETKAAYAVDDSGKRTLDDVIDGADIFLGCSGPKVLTQEMVKK
MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
GATAINEEMKLAAVHAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI
APAVAKAAMDSGVATRPIADFDAYIDKLTEFVYKTNLFMKPIFSQARKDPQRVVLPEG
EEARVLHATQELITLGLAKPILIGRPSVIEMRIQKLGLQIKAGVDFEIVNNESDPRFK
EYWSEYYQIMKRRGVTQEQAQRAMIGNHTAIGAIMVQRGEADAMICGTIGDYHEHFGV
VKAVFDYRDGVHTAGAMNALLLPSGNTFIADTYVNEDPTPEQLAEITVMAAETVRRFG
IEPKVALLSHSNFGSSNSLSASKMRETLERVRERAPDLMIDGEMHGDAALVESIRNDR
MPDSSLKGAANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVSKPVHVLTPIASV
RRIVNMVALAVVEAQTTPL"
misc_feature 416852..419113
/locus_tag="SA 