LOCUS NC_010175 5258541 bp DNA circular BCT 24-JAN-2012
DEFINITION Chloroflexus aurantiacus J-10-fl chromosome, complete genome.
ACCESSION NC_010175
VERSION NC_010175.1 GI:163845603
DBLINK Project: 57657
BioProject: PRJNA57657
KEYWORDS .
SOURCE Chloroflexus aurantiacus J-10-fl
ORGANISM Chloroflexus aurantiacus J-10-fl
Bacteria; Chloroflexi; Chloroflexales; Chloroflexaceae;
Chloroflexus.
REFERENCE 1 (bases 1 to 5258541)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chertkov,O.,
Brettin,T., Bruce,D., Detter,J.C., Han,C., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Pierson,B.K.,
Blankenship,R.E. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Chloroflexus aurantiacus J-10-fl
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5258541)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5258541)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chertkov,O.,
Brettin,T., Bruce,D., Detter,J.C., Han,C., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Pierson,B.K.,
Blankenship,R.E. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000909.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4000861
Source DNA and bacteria available from Robert E. Blankenship
(blankenship@wustl.edu)
Contacts: Robert E. Blankenship (blankenship@wustl.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..5258541
/organism="Chloroflexus aurantiacus J-10-fl"
/mol_type="genomic DNA"
/strain="J-10-fl"
/db_xref="taxon:324602"
gene 336..1775
/gene="dnaA"
/locus_tag="Caur_0001"
/db_xref="GeneID:5825775"
CDS 336..1775
/gene="dnaA"
/locus_tag="Caur_0001"
/note="binds to the dnaA-box as an ATP-bound complex at
the origin of replication during the initiation of
chromosomal replication; can also affect transcription of
multiple genes including itself."
/codon_start=1
/transl_table=11
/product="chromosomal replication initiation protein"
/protein_id="YP_001633648.1"
/db_xref="GI:163845604"
/db_xref="InterPro:IPR001957"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013159"
/db_xref="InterPro:IPR013317"
/db_xref="GeneID:5825775"
/translation="MNLTQIWKATLSALQTQTSRHDYEALLRPATLLSLDNGAAFIGV
SSPGQKEGLENRLLMPLRNALARVVGYPVQVQVLIANLNSRTEPSPSLTLSNGSRLMS
DPEPVVAETPAPALTPGNGTGERVVQLDLASAMRSGMLNPRYTFSSFIVGSSNRLAHA
ACLAVADNPGQAYNPLFLYGGVGLGKTHLLHAIGNRVLDRDPEINVLYVSSEKFTNDL
INAIRRQQTEEFRMRYRNIDVLLIDDIQFIAGKDATQEEFFHTFNTLHSAAKHIVISS
DRPPKAILTLEERLRSRFEWGLIVDVQPPDLETRTAILRAKAEQMSVHVPDEVIDFLA
HKIQSNIRELEGSLNRVAAYAELNRAPITIETATAALADLLGNQRRRRISAEAILQIV
SEHYGIEVEQLRARNRSRHVVVPRQVAMYLLREETESSLVDIGNLLGGRDHTTVMYGC
EKIAEEINSDSRLRSEVMAIRERIQMLRG"
misc_feature 339..1760
/gene="dnaA"
/locus_tag="Caur_0001"
/note="chromosomal replication initiation protein;
Reviewed; Region: dnaA; PRK00149"
/db_xref="CDD:178902"
misc_feature 798..1229
/gene="dnaA"
/locus_tag="Caur_0001"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 873..896
/gene="dnaA"
/locus_tag="Caur_0001"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(876..899,1062..1064,1158..1160)
/gene="dnaA"
/locus_tag="Caur_0001"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 1050..1067
/gene="dnaA"
/locus_tag="Caur_0001"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 1200..1202
/gene="dnaA"
/locus_tag="Caur_0001"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 1491..1757
/gene="dnaA"
/locus_tag="Caur_0001"
/note="C-terminal domain of bacterial DnaA proteins. The
DNA-binding C-terminal domain of DnaA contains a
helix-turn-helix motif that specifically interacts with
the DnaA box, a 9-mer motif that occurs repetitively in
the replication origin oriC. Multiple...; Region:
Bac_DnaA_C; cd06571"
/db_xref="CDD:119330"
misc_feature order(1557..1559,1581..1586,1605..1607,1623..1631,
1656..1670,1677..1679,1686..1691)
/gene="dnaA"
/locus_tag="Caur_0001"
/note="DnaA box-binding interface [nucleotide binding];
other site"
/db_xref="CDD:119330"
gene 1940..3841
/locus_tag="Caur_0002"
/db_xref="GeneID:5824891"
CDS 1940..3841
/locus_tag="Caur_0002"
/note="PFAM: AMP-dependent synthetase and ligase;
KEGG: mpt:Mpe_A2513 PrpE protein ligase (putative
propionyl-CoA synthetase)"
/codon_start=1
/transl_table=11
/product="AMP-dependent synthetase and ligase"
/protein_id="YP_001633649.1"
/db_xref="GI:163845605"
/db_xref="InterPro:IPR000873"
/db_xref="GeneID:5824891"
/translation="MGYEAVYRRSIEEPEAYWAEFAAELHWYKPWEKVLDNSNPPFTR
WFVGGETNLCYNAVDRHALGGRRGQAALIWESAETGQSRTLTYFELYREVNRLAGLFH
NLGVRKGDRIIIYMPMVPEAIFAMLACVRIGAIHSVVFGGFSVTSLASRIDDAEPVLI
VTADAGMRKGQPVPLKEIVDKALAEANTDSVRDVLVLNRGLVPVELKKGRDLDWYEQL
AKRGERYVEPVPVASTDPSYILYTSGTTGKPKGVVRDTGGYMVALYASMSTIYNCGDG
DVFWSTSDIGWVVGHSYIVYAPLLKGVPTVVYEGRPDHPDPGVWWRVIEKYGVTHVFT
APTALRALRKFPEHWMRDADISSLKLLYAAGEPLDAPTYEWASAALGVPVIDHYWQTE
SGWPMVTNPVGVELLPIKPGSPTKPAFGHRLEVVDADGNPVPPGEKGFLVEHGPLPPG
TLLTLWNDDERFVKGYWGHFKDKLLYMTGDYAIKDADGYLFMLGRADEVLNVSGHRLG
TREIEEVVSAHPAVAEASVIGVRDELKGEDVLVVAVLKQHITPQMQDDIANEIRQLVR
ERIGPIATPKAVHFVSMLPKTRSGKIMRRVIRAVYQGDNLGDLSTIEDDATVDMVREA
IELLRGDLS"
misc_feature 1940..3817
/locus_tag="Caur_0002"
/note="propionyl-CoA synthetase; Provisional; Region:
prpE; PRK10524"
/db_xref="CDD:182517"
misc_feature 1946..2173
/locus_tag="Caur_0002"
/note="Domain of unknown function (DUF3448); Region:
DUF3448; pfam11930"
/db_xref="CDD:204782"
misc_feature 2195..3520
/locus_tag="Caur_0002"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
misc_feature 3653..3781
/locus_tag="Caur_0002"
/note="Domain of unknown function (DUF4009); Region:
DUF4009; pfam13193"
/db_xref="CDD:205374"
gene 4062..5996
/locus_tag="Caur_0003"
/db_xref="GeneID:5824892"
CDS 4062..5996
/locus_tag="Caur_0003"
/note="TIGRFAM: acetate--CoA ligase;
PFAM: AMP-dependent synthetase and ligase;
KEGG: rca:Rcas_3935 acetate--CoA ligase"
/codon_start=1
/transl_table=11
/product="acetate--CoA ligase"
/protein_id="YP_001633650.1"
/db_xref="GI:163845606"
/db_xref="InterPro:IPR000873"
/db_xref="InterPro:IPR011904"
/db_xref="GeneID:5824892"
/translation="MTETRDVALPDTSELYYPDPALVEQSNVMAYARSKGFNSYDELY
QWTISHREEFWADMASQLEWFKPWDKVLDDSNKPFYQWFVGGKTNIVYNAIDRHLKTW
RKNKLALIWEGEDGSQRTYSYYQLNYEVSRIANVLKSMGVKKGDIVTIYMPRIPELMF
SMLACAKIGAAHSVVYGGFSEAALADRLADAKSKVLITADGGYMRGKVVELKKIVNEA
LSRTPTVQTCLVFRHTNHGAPMEQGRDFWMHDLLGLPIANGHCPTEEMDAEDMLFILY
TSGTTGKPKGVVHTHGGYMVGTYTTLKFVFDIKDEDRYWCAADPGWITGHSFIVYAPL
INGATSFMYEGAPNYPYPDRWWSMVAKHGITILYTAPTAIRGLMRFGDLWPSRHDLST
LRLLGSVGEPINPEAWKWFYEKIGHGRCPIMDTWWQTETGHFMITPTPAVPLKPGSAT
RPFLGIEADVVHEDGSPCAPDEDGLLVIKNPWPGMMRTILNDPQRYVEGYWQKVPPYY
AAGDSARKDKDGYIWVIGRLDDVIKVSGYRLGTAEVESALVSHPAVAEAAAIGLPHEV
KGNAIHAFVILRAGYEPSHDLEEKLRAHVGHELGPIARPDSITFVTSLPKTRSGKIMR
RVLRARALGLPEGDVSTLEE"
misc_feature 4104..5993
/locus_tag="Caur_0003"
/note="acetyl-CoA synthetase; Provisional; Region:
PRK00174"
/db_xref="CDD:178915"
misc_feature 4167..4406
/locus_tag="Caur_0003"
/note="Domain of unknown function (DUF3448); Region:
DUF3448; pfam11930"
/db_xref="CDD:204782"
misc_feature 4425..5738
/locus_tag="Caur_0003"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
misc_feature 5865..5993
/locus_tag="Caur_0003"
/note="Domain of unknown function (DUF4009); Region:
DUF4009; pfam13193"
/db_xref="CDD:205374"
gene complement(6173..7702)
/locus_tag="Caur_0004"
/db_xref="GeneID:5824893"
CDS complement(6173..7702)
/locus_tag="Caur_0004"
/note="PFAM: protein kinase;
SMART: tyrosine protein kinase; serine/threonine protein
kinase;
KEGG: rrs:RoseRS_3893 protein kinase"
/codon_start=1
/transl_table=11
/product="protein kinase"
/protein_id="YP_001633651.1"
/db_xref="GI:163845607"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR001245"
/db_xref="InterPro:IPR002290"
/db_xref="InterPro:IPR008271"
/db_xref="GeneID:5824893"
/translation="MAEVTEILCPICHKPNLRRAKFCQHCGHDVVLNNDRPTDRRRYV
ITRIVKRGGQGAVYEGIDQDGQVYAIKEMLDRFADPNERAEAVERFNAEAELLQRLRH
PRIPRVYSHFTDEGRHYLTMDFIRGEDLEQIIEREGRIDEQRVLRWADEICDVLGYLH
GKGFIYRDMKPSNVMIEPSGDVKLIDFGIAKLFKPTERGTQIGTPGYAPPEQYQGLAT
PQSDVYALAATLHHLLTGRDPTQEMPFSFPPARTLVPTISERTSAALERALQKVPADR
FATMDEFRAALIPARQPQPVQVQVSRPASPRAPAAPAAARPAGQTPSAASVSPPRPRP
PIFADPPISIQGGGAASSASTRRSAPPATVSPVQPPPSPTTSSRSRLGGQIVLSLILL
GLIALTLFSGYVIVTRPAWAAPVIELILGNSGSLSGELQTIEYELEATVPVGTSNREL
LEVFRTMYQERVQRELGNQAQINPNVPISYVGTPTEIARDGDQITYRARLTGTVWVTA
P"
misc_feature complement(7613..7678)
/locus_tag="Caur_0004"
/note="zinc-ribbon domain; Region: zinc_ribbon_2;
pfam13240"
/db_xref="CDD:205420"
misc_feature complement(<7622..7678)
/locus_tag="Caur_0004"
/note="Double zinc ribbon; Region: DZR; pfam12773"
/db_xref="CDD:205068"
misc_feature complement(6872..7576)
/locus_tag="Caur_0004"
/note="Serine/Threonine protein kinases, catalytic domain;
Region: S_TKc; smart00220"
/db_xref="CDD:197582"
misc_feature complement(7031..7552)
/locus_tag="Caur_0004"
/note="Catalytic domain of Protein Kinases; Region: PKc;
cd00180"
/db_xref="CDD:173623"
misc_feature complement(order(7085..7096,7136..7138,7145..7147,
7178..7180,7184..7189,7193..7195,7199..7201,7310..7312,
7316..7318,7328..7339,7385..7387,7490..7492,7496..7498,
7532..7534,7544..7552))
/locus_tag="Caur_0004"
/note="active site"
/db_xref="CDD:173623"
misc_feature complement(order(7145..7147,7178..7180,7184..7189,
7193..7195,7199..7201,7316..7318,7328..7339,7385..7387,
7490..7492,7496..7498,7532..7534,7544..7552))
/locus_tag="Caur_0004"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:173623"
misc_feature complement(order(7085..7096,7136..7138,7187..7189,
7193..7195,7199..7201,7310..7312,7316..7318,7544..7546))
/locus_tag="Caur_0004"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173623"
misc_feature complement(order(7085..7096,7130..7150))
/locus_tag="Caur_0004"
/note="activation loop (A-loop); other site"
/db_xref="CDD:173623"
gene complement(7817..9226)
/locus_tag="Caur_0005"
/db_xref="GeneID:5824894"
CDS complement(7817..9226)
/locus_tag="Caur_0005"
/note="TIGRFAM: small GTP-binding protein; GTP-binding
protein Era;
PFAM: GTP-binding protein HSR1-related; KH type 2 domain
protein; Miro domain protein;
KEGG: rrs:RoseRS_2181 GTP-binding protein Era"
/codon_start=1
/transl_table=11
/product="GTP-binding protein Era"
/protein_id="YP_001633652.1"
/db_xref="GI:163845608"
/db_xref="InterPro:IPR002917"
/db_xref="InterPro:IPR004044"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR005289"
/db_xref="InterPro:IPR005662"
/db_xref="InterPro:IPR006073"
/db_xref="InterPro:IPR013684"
/db_xref="GeneID:5824894"
/translation="MKYCSLDPDVGTLYLYFTDIEEGQATAVMEYPVSLLLDAQGAIF
GCRLDLDDEVILSQLELVLEGSYNWLDGEYGHLYIRIADEDPVETITLSETAILDLDD
DDLVLGIELALPEEWRTPERLQRLTPLMVTFDDEPVDGEGPVVFTPPAISADDLPDSD
EEPATPVAEEPLQWRSGFVALVGKPNVGKSTLLNALLGEKVAIVSPRPQTTRVPVRGI
LSRPGEQIIFIDTPGIHEPSHRLGKLMVELAERTLPNADVICFMVDISQPPTRLDRMI
AQQVQRARGHKLLVLNKVDQKPKRPGENYLPAYRELGQWEMEIAISARRRLGLTALLS
EISARLPEGPPLYPLDQMTDQTEQQLAAEFVREKALFYLQQEVPHAIAIEVEEWQEKE
TATYIRMTINVEKESQKGILIGAGGGMLKKIGSAARASIERMLGRPVYLDLWVKVRPN
WRDDPSALGWLGYRAKNFL"
misc_feature complement(7838..8704)
/locus_tag="Caur_0005"
/note="GTPase Era; Reviewed; Region: era; PRK00089"
/db_xref="CDD:178854"
misc_feature complement(8207..8704)
/locus_tag="Caur_0005"
/note="E. coli Ras-like protein (Era) is a multifunctional
GTPase; Region: Era; cd04163"
/db_xref="CDD:206726"
misc_feature complement(8657..8680)
/locus_tag="Caur_0005"
/note="G1 box; other site"
/db_xref="CDD:206726"
misc_feature complement(order(8258..8263,8342..8344,8348..8353,
8528..8530,8594..8602,8612..8614,8654..8674))
/locus_tag="Caur_0005"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206726"
misc_feature complement(order(8585..8629,8633..8635))
/locus_tag="Caur_0005"
/note="Switch I region; other site"
/db_xref="CDD:206726"
misc_feature complement(8594..8596)
/locus_tag="Caur_0005"
/note="G2 box; other site"
/db_xref="CDD:206726"
misc_feature complement(order(8462..8467,8525..8542))
/locus_tag="Caur_0005"
/note="Switch II region; other site"
/db_xref="CDD:206726"
misc_feature complement(8528..8539)
/locus_tag="Caur_0005"
/note="G3 box; other site"
/db_xref="CDD:206726"
misc_feature complement(8342..8353)
/locus_tag="Caur_0005"
/note="G4 box; other site"
/db_xref="CDD:206726"
misc_feature complement(8255..8263)
/locus_tag="Caur_0005"
/note="G5 box; other site"
/db_xref="CDD:206726"
misc_feature complement(7871..8101)
/locus_tag="Caur_0005"
/note="KH domain; Region: KH_2; pfam07650"
/db_xref="CDD:203707"
gene complement(9231..10391)
/locus_tag="Caur_0006"
/db_xref="GeneID:5824895"
CDS complement(9231..10391)
/locus_tag="Caur_0006"
/note="PFAM: protein of unknown function UPF0118;
KEGG: rrs:RoseRS_1556 protein of unknown function UPF0118"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633653.1"
/db_xref="GI:163845609"
/db_xref="InterPro:IPR002549"
/db_xref="GeneID:5824895"
/translation="MGQEERPIRFSYQAKWISSALIVVLTIWLLFAVTHILPPFIGAI
ITAYLFNPLIGWLHRRTRIGRAIWIIVLYIVAFFVLYSLFTALWPRIVQQSRDLAANA
PVIIRELTIFFEQNQTIEVGDFVISLAPLEAQVIGLIRDVAGWLSGNVPKIVFSALES
VIYLLVYLIITFYLLLQAPQLKAWSRSLIPAPYRREIGHLGYQIDRVFSAYIRGQLIL
IVIMSVLLYIPLSILQVPYALVIAVASGVLEILPIIGPWSAAGIAMTVALFQPVTPFG
LSNVALAVLLGIIYFVLRQIEDHFIIPNVMGPLVRLHPGVVIFAILAGGALAGAFGLF
ISIPIAAVIRILLSYIYRKLTDQPETPSDTDQPHTAAQQETVTGEVALGSQG"
misc_feature complement(9351..10331)
/locus_tag="Caur_0006"
/note="Domain of unknown function DUF20; Region: UPF0118;
pfam01594"
/db_xref="CDD:201878"
misc_feature complement(9450..10331)
/locus_tag="Caur_0006"
/note="pheromone autoinducer 2 transporter; Reviewed;
Region: tqsA; cl00465"
/db_xref="CDD:207060"
gene complement(10490..10765)
/locus_tag="Caur_0007"
/db_xref="GeneID:5824896"
CDS complement(10490..10765)
/locus_tag="Caur_0007"
/note="works in conjunction with MinC and MinD to enable
cell division at the midpoint of the long axis of the
cell"
/codon_start=1
/transl_table=11
/product="cell division topological specificity factor
MinE"
/protein_id="YP_001633654.1"
/db_xref="GI:163845610"
/db_xref="InterPro:IPR005527"
/db_xref="GeneID:5824896"
/translation="MSFLNGLFGRKRDSSAELAKQRLLTVLIDDRYKLTPEMMAQMKA
DLAEVLKRYLPAIDAEQIEVTLSRGEAHDLLKADVPLRRATDHPPNR"
misc_feature complement(10505..10765)
/locus_tag="Caur_0007"
/note="cell division topological specificity factor MinE;
Provisional; Region: PRK13991"
/db_xref="CDD:172493"
gene complement(10781..11581)
/locus_tag="Caur_0008"
/db_xref="GeneID:5824897"
CDS complement(10781..11581)
/locus_tag="Caur_0008"
/note="TIGRFAM: septum site-determining protein MinD;
PFAM: Cobyrinic acid ac-diamide synthase;
KEGG: rca:Rcas_3409 septum site-determining protein MinD"
/codon_start=1
/transl_table=11
/product="septum site-determining protein MinD"
/protein_id="YP_001633655.1"
/db_xref="GI:163845611"
/db_xref="InterPro:IPR002586"
/db_xref="InterPro:IPR010223"
/db_xref="GeneID:5824897"
/translation="MGRVITVTSGKGGVGKTTTTANLGTALAMRGARVAVVDADIGLR
NLDVVMGLENRIVYDLVDVVEGRARLRQALIKDKRLPELCLLPAAQTRDKDAVSAQQM
IDLTRQLRAEFDFVLIDSPAGIEAGFRNAIAGADEVIIVTTPEVSAVRDADRIVGLIE
AAEKGPASLIINRIKPRLVSRGEMLSVEDVLELLAISLLGIVPEDETIVIATNRGEAA
VYDPNSLAGRAYINIAQRLAGEDVPVMAIPDQQGMLDRLLSLFGRRRT"
misc_feature complement(10892..11494)
/locus_tag="Caur_0008"
/note="Bacterial cell division requires the formation of a
septum at mid-cell. The site is determined by the min
operon products MinC, MinD and MinE. MinC is a nonspecific
inhibitor of the septum protein FtsZ. MinE is the
supressor of MinC. MinD plays a pivotal...; Region: MinD;
cd02036"
/db_xref="CDD:73299"
misc_feature complement(11462..11470)
/locus_tag="Caur_0008"
/note="Switch I; other site"
/db_xref="CDD:73299"
misc_feature complement(11213..11227)
/locus_tag="Caur_0008"
/note="Switch II; other site"
/db_xref="CDD:73299"
gene complement(11591..12259)
/locus_tag="Caur_0009"
/db_xref="GeneID:5824898"
CDS complement(11591..12259)
/locus_tag="Caur_0009"
/note="TIGRFAM: septum site-determining protein MinC;
PFAM: Septum formation inhibitor MinC;
KEGG: rrs:RoseRS_1559 septum site-determining protein
MinC"
/codon_start=1
/transl_table=11
/product="septum site-determining protein MinC"
/protein_id="YP_001633656.1"
/db_xref="GI:163845612"
/db_xref="InterPro:IPR005526"
/db_xref="InterPro:IPR013033"
/db_xref="GeneID:5824898"
/translation="MTMSDLISIKGSRDGLRLRLDANVAWSELLHRLDLHLGERQSFF
HGANLVIDLGEREVSSAQLDEMLALIRQHGVQATAIDSTERSTRAAARSVGLTARPLS
RSPEATPMPEAEALLVMRTLRSGQVLRHTGHITLIGDVNPGGEIIAGGSVVVWGRLRG
LVHAGALGDRSAIICALELRPTQLRIADLIARAPDQQALSRPEFARVIAGEIIVDGWE
AFKR"
misc_feature complement(11594..12259)
/locus_tag="Caur_0009"
/note="septum formation inhibitor; Reviewed; Region: minC;
PRK00513"
/db_xref="CDD:179052"
misc_feature complement(11633..11914)
/locus_tag="Caur_0009"
/note="Septum formation inhibitor MinC, C-terminal domain;
Region: MinC_C; pfam03775"
/db_xref="CDD:146423"
gene 12961..13968
/locus_tag="Caur_0010"
/db_xref="GeneID:5824899"
CDS 12961..13968
/locus_tag="Caur_0010"
/EC_number="1.2.1.12"
/note="KEGG: rca:Rcas_2314 glyceraldehyde-3-phosphate
dehydrogenase, type I;
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I;
PFAM: glyceraldehyde 3-phosphate dehydrogenase"
/codon_start=1
/transl_table=11
/product="glyceraldehyde-3-phosphate dehydrogenase"
/protein_id="YP_001633657.1"
/db_xref="GI:163845613"
/db_xref="InterPro:IPR000173"
/db_xref="InterPro:IPR006424"
/db_xref="GeneID:5824899"
/translation="MAVRVGINGFGRIGRLALRAAWAWPELDIVHINEVGGDAATAAH
LLSFDSTQGRWSVEVHGEGNQLLIDDKTVGYSQIRDPGAVPWADAGVDIVLEATGKFR
TAEQLAAYFSAGVKKVIVAAPVKGEALNVVMGVNDHWYEPDRHHLLTAASCTTNCLAP
IVKVIHEGIGIRHGMITTIHSSTNTQTVHDRPHKDLRRARAASLSLIPTTTGSATAIG
LIFPELQGKLDGQAVRVPLLNASLTDCVFEVRRPTTVAEVNGLLQAAAEGALKGILAY
ETRPLVSIDFLGNPHSAIVDSLCTMVTNETQVKIYAWYDNEWGYANRYVELARKVALL
L"
misc_feature 12961..13959
/locus_tag="Caur_0010"
/note="glyceraldehyde-3-phosphate dehydrogenase;
Validated; Region: PRK08955"
/db_xref="CDD:169599"
misc_feature 12967..13419
/locus_tag="Caur_0010"
/note="Glyceraldehyde 3-phosphate dehydrogenase, NAD
binding domain; Region: Gp_dh_N; smart00846"
/db_xref="CDD:197914"
misc_feature 13432..13902
/locus_tag="Caur_0010"
/note="Glyceraldehyde 3-phosphate dehydrogenase,
C-terminal domain; Region: Gp_dh_C; pfam02800"
/db_xref="CDD:202402"
gene 13965..15263
/locus_tag="Caur_0011"
/db_xref="GeneID:5824900"
CDS 13965..15263
/locus_tag="Caur_0011"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: rrs:RoseRS_1225 major facilitator superfamily MFS_1"
/codon_start=1
/transl_table=11
/product="major facilitator transporter"
/protein_id="YP_001633658.1"
/db_xref="GI:163845614"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:5824900"
/translation="MKTTPSTEASATMTQQRADRRNYVLVTIAYWADTLTDGAIRMLV
LFYFAQLGYSPFAVASLFLFYEIFGVITNLFGGYIGARFGLKLTLFLGLATQLVALSM
LAFAPPSLLVVPYVMAAQALSGIAKDLTKMSSKSAVKLVAGTGEGQLYRWVSVLTGSK
NAIKGLGFFVGALLLSLFGFQTALIMLAVLVLTALVGAVSTISGDLGVANKKAKFKQI
FSPNRAVNLLAAARIFLFGARDVWFVVGLPVFFITVLGWDFWLAGGFMAAWTIGYGFV
QASTPALIRRRIANAQAPDGRTAMWLAFALAAFPAGIAITLHAGLIPTLSVVGGLLAF
GIIFALNSAVHSYLILAYADDAKVAMNVGFYYMANALGRLTGTVLSGALYQWGMQSNP
FGGLIACLWASAGFILIAGLLSIRLPTPTRTVVGTWKVEE"
misc_feature 14088..15095
/locus_tag="Caur_0011"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
gene complement(15276..15677)
/locus_tag="Caur_0012"
/pseudo
/db_xref="GeneID:5828162"
gene 16693..17049
/locus_tag="Caur_0013"
/db_xref="GeneID:5828163"
CDS 16693..17049
/locus_tag="Caur_0013"
/note="PFAM: regulatory protein ArsR;
KEGG: rca:Rcas_3618 transcriptional regulator, ArsR
family"
/codon_start=1
/transl_table=11
/product="regulatory protein ArsR"
/protein_id="YP_001633659.1"
/db_xref="GI:163845615"
/db_xref="InterPro:IPR001845"
/db_xref="GeneID:5828163"
/translation="MIRAMKTTTTVKQARLFKALMHPVRIQILDILREGEACVCHIEA
VLGLRQAYVSQQLAVLRKAGLIRDRREGPNIYYRIGHRDVFTILDVARTLVGEDELVT
PTTVRCSCPRCTAPTA"
misc_feature 16741..16947
/locus_tag="Caur_0013"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature order(16741..16746,16750..16752,16759..16761,16768..16773,
16780..16785,16792..16794,16882..16884,16942..16947)
/locus_tag="Caur_0013"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:28974"
misc_feature order(16744..16749,16759..16767,16804..16812,16837..16848,
16852..16857,16864..16869,16873..16878,16894..16902,
16915..16923)
/locus_tag="Caur_0013"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(16804..16806,16813..16815,16942..16944)
/locus_tag="Caur_0013"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
gene 17072..17305
/locus_tag="Caur_0014"
/db_xref="GeneID:5828164"
CDS 17072..17305
/locus_tag="Caur_0014"
/note="TIGRFAM: redox-active disulfide protein 2;
KEGG: rca:Rcas_3619 redox-active disulfide protein 2"
/codon_start=1
/transl_table=11
/product="redox-active disulfide protein 2"
/protein_id="YP_001633660.1"
/db_xref="GI:163845616"
/db_xref="InterPro:IPR005243"
/db_xref="GeneID:5828164"
/translation="MVSVKVLGPGCANCRKLEERVRHVIRQHQLEAEIEKVTDYAQIM
RWNVMRTPGLVVNDVLVAAGRIPSEEEIAGWLR"
misc_feature 17075..17302
/locus_tag="Caur_0014"
/note="Thioredoxin domain; Region: Thioredoxin_3;
pfam13192"
/db_xref="CDD:205373"
gene 17362..18450
/locus_tag="Caur_0015"
/db_xref="GeneID:5828165"
CDS 17362..18450
/locus_tag="Caur_0015"
/note="PFAM: permease;
KEGG: rca:Rcas_3620 permease"
/codon_start=1
/transl_table=11
/product="permease"
/protein_id="YP_001633661.1"
/db_xref="GI:163845617"
/db_xref="InterPro:IPR005524"
/db_xref="GeneID:5828165"
/translation="MQKLAYLMENSIMAQTISPTADRRPAWRIWLLVVGGAAVWLIAY
NLIQPLANWLTFQVIGLQEGSHLGEAVAFFLYDVPKILLLLSGMIFLISTIRSFFSPE
RTRELLGGKREGVGNILAAGLGVLTPFCSCSAVPLFIGFVEAGIPLGVTFSFLIAAPM
VNEVALVMLFGLFGWQVALLYLVAGMSVAILAGIVIGRLHLERYVEDFVWQIKGGNGT
VALATPTWPDRFAIAWANTREIVGKVWLFVVLGIAVGAGIHGYVPEDALAGILGREAW
WSVPMGVLLGVPLYSNAAGVIPVVQALMAKGAALGTVLAFMMSVVALSLPELIILRRV
LKLPLIATFVGVVASGIILVGYLFNLMM"
misc_feature 17554..18444
/locus_tag="Caur_0015"
/note="Predicted permeases [General function prediction
only]; Region: COG0701"
/db_xref="CDD:31045"
misc_feature 17554..18441
/locus_tag="Caur_0015"
/note="Predicted permease; Region: DUF318; pfam03773"
/db_xref="CDD:112580"
gene complement(18495..18875)
/locus_tag="Caur_0016"
/db_xref="GeneID:5828166"
CDS complement(18495..18875)
/locus_tag="Caur_0016"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633662.1"
/db_xref="GI:163845618"
/db_xref="GeneID:5828166"
/translation="MSGSQFGRRQILSIIAGGYGGLLCAFGALLIFFGLVNYSEVGLG
GLAAFLAIIFSVPIILFAVVLIVAAIGLWNNRPWARILLMVLAAIHLAIAVSMIPLGD
LWPISLLGIALSVGIFWFVRGLQE"
misc_feature complement(<18513..18857)
/locus_tag="Caur_0016"
/note="lysyl-tRNA synthetase; Provisional; Region: lysS;
PRK02983"
/db_xref="CDD:235095"
gene complement(19929..20099)
/locus_tag="Caur_0017"
/pseudo
/db_xref="GeneID:5828167"
gene 20916..21719
/locus_tag="Caur_0018"
/db_xref="GeneID:5828168"
CDS 20916..21719
/locus_tag="Caur_0018"
/note="PFAM: protein of unknown function DUF574;
KEGG: rrs:RoseRS_1762 protein of unknown function DUF574"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633663.1"
/db_xref="GI:163845619"
/db_xref="InterPro:IPR006764"
/db_xref="GeneID:5828168"
/translation="MEPSGAVELSPSETPNAARIYSYTLGGSYYLPVDRAAAEYMFSL
VPSTPKWVRMLRSFLQHAARRLWAEGLTHFIDFASGLPTDDHIHHVLPDARVVYSDLD
PETYNLARQLVEHLPNVLYLRHDVREARVLLDSPEVQNFLGGERRVAFGLNGITVFLS
PDEISHLFHDLYEWAAPGSRLYITYETKMPGLMTPRMEQFIDMFRQAGSPFWLYSLEE
CIALSRPWQIPPTGLMPLHEFLGLPADYITESDQEGVGLQFYAAILTKP"
misc_feature 20949..21629
/locus_tag="Caur_0018"
/note="S-adenosyl methyltransferase; Region:
Methyltransf_19; pfam04672"
/db_xref="CDD:113441"
misc_feature <21189..21470
/locus_tag="Caur_0018"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cl16911"
/db_xref="CDD:213141"
gene 22044..23089
/locus_tag="Caur_0019"
/pseudo
/db_xref="GeneID:5828169"
gene 23546..24463
/locus_tag="Caur_0020"
/db_xref="GeneID:5828170"
CDS 23546..24463
/locus_tag="Caur_0020"
/note="TIGRFAM: phosphonate ABC transporter, periplasmic
phosphonate-binding protein;
KEGG: gur:Gura_0350 phosphonate ABC transporter,
periplasmic phosphonate-binding protein"
/codon_start=1
/transl_table=11
/product="phosphonate ABC transporter periplasmic
phosphonate-binding protein"
/protein_id="YP_001633664.1"
/db_xref="GI:163845620"
/db_xref="InterPro:IPR000276"
/db_xref="InterPro:IPR005770"
/db_xref="GeneID:5828170"
/translation="MKYYLFIIFIILLGISGCQRTTTSLIQLDDLQPLPMPTPVTSPP
LRVSVASVISAQGTVQSYQPLLDYLSARLGREVTLIQRRTYTETNELIGRNEVDVAFV
CTSAYIDGRDRYGMSLLVAPQVNGETTYHSLLIVPTDSPARSMADLRGKVFAFTDPTS
FSGRVYPTALVQELGDSPESFFQDTFFTYSHDAAIEAVANGLADGAAVDSLVFHFALS
RHPELREQVKVIHTSPPFGIPPVVVGPGVRPQLRAELQNILLGMADDPSPLAQTALES
LGIDRFVMIDDAAYASARLLRSQVGPVSP"
misc_feature 23681..24436
/locus_tag="Caur_0020"
/note="NMT1-like family; Region: NMT1_2; cl15260"
/db_xref="CDD:212369"
misc_feature 23684..24415
/locus_tag="Caur_0020"
/note="ABC transporter, phosphonate, periplasmic
substrate-binding protein; Region: Phosphonate-bd;
pfam12974"
/db_xref="CDD:205170"
gene 24460..25935
/locus_tag="Caur_0021"
/db_xref="GeneID:5828171"
CDS 24460..25935
/locus_tag="Caur_0021"
/note="PFAM: ATP-binding region ATPase domain protein;
histidine kinase HAMP region domain protein; histidine
kinase dimerisation and phosphoacceptor region;
KEGG: dsy:DSY4128 hypothetical protein"
/codon_start=1
/transl_table=11
/product="ATPase domain-containing protein"
/protein_id="YP_001633665.1"
/db_xref="GI:163845621"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR011712"
/db_xref="GeneID:5828171"
/translation="MNAGFLPHQVVRWATTLWQIVGSVNIRAKILGIVLGLVVLMGVA
ATIEVRTLLEHTLTVQTHERSIAIARDVAARSTDLVLMRDYYRLFRLLQDTQENNPDL
RYAFIIDSEGTIVAHTFGSGFPVGLRDANTVTAQEHHRSVLLATNEGDIWDTAVPMFD
GRAGIARVGLSLAAREQTVAAVTGQLLITTIMAAAIGITAAAFLTWLLTRPILQLVAL
TKAVALGDFSQRARRWANDEIGQLTDAFNAMSEALAQAERERAEREHLRAQYVTQIIT
AQEEERKRIARELHDSTSQALTSLLVGLRSLADRHRSPEIAQQVDDLRSIVGQILNDL
HALARQLRPSVLDDLGLAAALQRYVAECRARSGLIIDLALPGLDDFRLDPVVETALYR
IVQEGLTNIIRHAHASTASVVIERRADRVRAIIEDDGCGFDPNALHGDGHLGLNGIRE
RAALLNGQLIIESSPGSGTTLYVEIPLTTRHEECYEQHSLS"
misc_feature 25081..25209
/locus_tag="Caur_0021"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature order(25081..25086,25093..25098,25102..25107,25114..25119,
25123..25125,25171..25176,25180..25185,25192..25197,
25201..25206)
/locus_tag="Caur_0021"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature 25294..25905
/locus_tag="Caur_0021"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG3920"
/db_xref="CDD:33706"
misc_feature 25300..25485
/locus_tag="Caur_0021"
/note="Histidine kinase; Region: HisKA_3; pfam07730"
/db_xref="CDD:203743"
misc_feature 25627..25884
/locus_tag="Caur_0021"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(25645..25647,25657..25659,25666..25668,25732..25734,
25738..25740,25744..25746,25750..25755,25786..25794,
25840..25842,25846..25848,25861..25866,25870..25872)
/locus_tag="Caur_0021"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 25657..25659
/locus_tag="Caur_0021"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(25744..25746,25750..25752,25789..25791)
/locus_tag="Caur_0021"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 25913..26554
/locus_tag="Caur_0022"
/db_xref="GeneID:5828172"
CDS 25913..26554
/locus_tag="Caur_0022"
/note="PFAM: regulatory protein LuxR; response regulator
receiver; Sigma-70 region 4 type 2;
KEGG: sth:STH3220 two-component response regulator"
/codon_start=1
/transl_table=11
/product="response regulator receiver"
/protein_id="YP_001633666.1"
/db_xref="GI:163845622"
/db_xref="InterPro:IPR000194"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR013249"
/db_xref="GeneID:5828172"
/translation="MSSILLVDDHAVLRAGLRLLLDGQPDLRVIGEAEDVRTAVVQAT
TLQPDLILLDLSLTGSSGLAAIPALRAVAPHSRILVLTMHDDEGYVRQALAAGANGYV
LKRAADAELIAAIRAVLRGELYIHPALTRQLLEDLLPQTPALNPWESLSEREREVLLL
VARGYTAAEIAEQLSLSPKTVETYRTRGMEKLGLRSRAALVQYALNHNLLTPT"
misc_feature 25919..26548
/locus_tag="Caur_0022"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:32379"
misc_feature 25925..26224
/locus_tag="Caur_0022"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(25934..25939,26072..26074,26096..26098,26156..26158,
26213..26215,26222..26224)
/locus_tag="Caur_0022"
/note="active site"
/db_xref="CDD:29071"
misc_feature 26072..26074
/locus_tag="Caur_0022"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(26081..26086,26090..26098)
/locus_tag="Caur_0022"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature <26396..26530
/locus_tag="Caur_0022"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(26396..26398,26402..26404,26408..26410,26501..26509,
26516..26518,26525..26530)
/locus_tag="Caur_0022"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
misc_feature order(26408..26416,26438..26443,26447..26452,26456..26470,
26501..26503)
/locus_tag="Caur_0022"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
gene 26713..27669
/locus_tag="Caur_0023"
/db_xref="GeneID:5828173"
CDS 26713..27669
/locus_tag="Caur_0023"
/note="PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain
protein;
KEGG: deb:DehaBAV1_0265 4Fe-4S ferredoxin, iron-sulfur
binding domain protein"
/codon_start=1
/transl_table=11
/product="4Fe-4S ferredoxin"
/protein_id="YP_001633667.1"
/db_xref="GI:163845623"
/db_xref="InterPro:IPR001450"
/db_xref="InterPro:IPR006311"
/db_xref="GeneID:5828173"
/translation="MTRQPTIPLTPVSRRGLLGALVAGAGALAAASVQAGLPASTGKS
ADTIDVLSPEEALAAYEAEIARLRATKVSGTPLDHLERMRAELLRALAKPVAERRWVM
VIDLRACVGCHGCTIACVAENKLPPGVVYRPVIDEEIGRYPNVTRRFIPRPCMQCDNP
PCTGVCPVSATFTNEHGVVEVDYEQCIGCRACIAACPYGARTFDFGYTYTADTTDPGV
MFGADQAATYETVTTFEYGKAHARRNLHDSPVGNVRKCHFCMHRVLNGQLPACVTTCI
GRATFFGDANDPDSLVSELIAKPNVMRLKEDLGTEPRVYYLQ"
sig_peptide 26713..26820
/locus_tag="Caur_0023"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.898 at
residue 36"
misc_feature 27022..27564
/locus_tag="Caur_0023"
/note="DMSO reductase, iron-sulfur subunit; Region:
DMSO_dmsB; TIGR02951"
/db_xref="CDD:131996"
misc_feature 27244..27312
/locus_tag="Caur_0023"
/note="4Fe-4S binding domain; Region: Fer4_6; pfam12837"
/db_xref="CDD:205098"
gene 27681..28826
/locus_tag="Caur_0024"
/db_xref="GeneID:5828174"
CDS 27681..28826
/locus_tag="Caur_0024"
/note="PFAM: Polysulphide reductase NrfD;
KEGG: det:DET0102 molybdopterin oxidoreductase, membrane
subunit, putative"
/codon_start=1
/transl_table=11
/product="polysulfide reductase NrfD"
/protein_id="YP_001633668.1"
/db_xref="GI:163845624"
/db_xref="InterPro:IPR005614"
/db_xref="GeneID:5828174"
/translation="MLKRLLYLAGTLGLLVGLWGLYDRLVYGHMHANYGSYVVWGLWV
ALYMFFAGVATGAFMLATLDLLFELPIFRGSGRMALWGSLVAMPAGLVAIGLDLGHMT
RIWKVYLQPNFGSVMAQLVWGYTIFLGIVVISLWLSLRPQPSRWLKPVMAIGLILAIF
LSGGIGALLGVNQNRISWHVSNLPAQFPVFNLTSGVALMLIAIGWFGPLRDPRRSQQL
RILSLAMVVLLLVKGYYLWSDVSQALYQNSSHGAAAINLVLFGPYGWAFWLLQLGLGM
LIPLIVLTMPVGQRGFAAGLMGVCVLIGLAVARANIIFPALSLPELQGLGEAFHGPHL
SFTYSPSLMEWAVTAGIVGAATIGFLLGTDRLPLFNRLPTEASSAAD"
misc_feature 27750..28808
/locus_tag="Caur_0024"
/note="Polysulphide reductase, NrfD; Region: NrfD;
cl01295"
/db_xref="CDD:212608"
gene 28879..32139
/locus_tag="Caur_0025"
/db_xref="GeneID:5828175"
CDS 28879..32139
/locus_tag="Caur_0025"
/note="PFAM: molybdopterin oxidoreductase; molydopterin
dinucleotide-binding region; molybdopterin oxidoreductase
Fe4S4 region;
KEGG: deh:cbdb_A118 molybdopterin oxidoreductase"
/codon_start=1
/transl_table=11
/product="molybdopterin oxidoreductase"
/protein_id="YP_001633669.1"
/db_xref="GI:163845625"
/db_xref="InterPro:IPR006311"
/db_xref="InterPro:IPR006656"
/db_xref="InterPro:IPR006657"
/db_xref="InterPro:IPR006963"
/db_xref="GeneID:5828175"
/translation="MKRQPETSTRTDQSMSRRDFLKTSALLGGGAALLGFGPLAGLAR
GEAPALELPLVDAANSIQTVCLQCNTGCGLKVKLIDGVAAKLEGNPYSPWTMEPPLPF
STPISASGSIDGALCPKGHAGIQTAYDPYRLMRVLKRKPGTPRGGGQWITIDFDQAIT
EIVEGGDLFGEGPVEGLRALYALKDAKLAKEMANAVNAILAARPEEKPALVEQFKRDF
ADHLDVLIDPDHPDLGPKNNQFAFVWGRLKNGRGDLVQRFVKKGFGSVNANGHTTVCQ
GSLYFTGKAMSEQFDPKTGKFSGGQKFYWQADLGNAEFVIFVGTNHFEANYGPTPQSP
RITQGVINSRLRYVVLDPRLSKLASKAWKWLPIKPGTDAAFAMAMIRWIIEQQRYNTR
FLAAANKAAAAANGEPSWTNATWLVKVKDGVPGKFLRASEIGLTTVVEETDAEGKKTK
AYVTADGTRFSFDPFVALVNGVPTPIDPNDPEAAPVIGDLLVDTELNGIAVKSSLQVI
YEAASTHTIEEWAAIADVKAEDIIEIAYEFTSHGTRAVADIHRGPSQHTNGFYTNFAF
YTLNALIGNFDHRGGLIKPTTYDRLGTKAKGPFEVEKMTNGANVPFGIDLLRTNTAYE
KSTLFNGYPARRPWFPLATDVYQEDIPSMGDAYPYQIKVAMFYMSAINYALPAAQTTI
EILADPKKIPLIITSDVMVGETSTYADYIFPDLSFLERWEFHGSHPSVPWKVENIRQP
AISLPNWPTVKVFGEEIPLSFEALVLAIAERLELPGFGPNGFGEGIPFTRPEHLYLKL
AANIAFGEKEDGSDGVPPADYAELEVFRRARRFLPPSVFDEAKWRAAIGNDEQLWRQT
VYVLNRGGRYQAYEKGWKGDLAGNPYAKQINLYQEKTATTINSMTGDHLIGYPTYIPA
GLAADGTPIVDEGYDLHLVTYKEAMMAKARGIADYWLLALMPENAILINRLDAERLGL
RNGDRVRISSASNPDGVWDLQNGTRKPMIGKVKVIEGIRPGVISFPLGWGHFASGASD
IVIDGVTIPADPRRAAGIHANAAMRVDPVLGNVTLSDLVGGSAVFYDTKVKLERVG"
sig_peptide 28879..29016
/locus_tag="Caur_0025"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.982) with cleavage site probability 0.492 at
residue 46"
misc_feature 29065..32133
/locus_tag="Caur_0025"
/note="tetrathionate reductase subunit A; Provisional;
Region: PRK14991"
/db_xref="CDD:184953"
misc_feature 29065..>30135
/locus_tag="Caur_0025"
/note="Molybdopterin-Binding (MopB) domain of the MopB
superfamily of proteins, a large, diverse, heterogeneous
superfamily of enzymes that, in general, bind
molybdopterin as a cofactor. The MopB domain is found in a
wide variety of molybdenum- and...; Region:
Molybdopterin-Binding; cl09928"
/db_xref="CDD:209095"
misc_feature order(29233..29235,29692..29694,29698..29706,29830..29835,
29839..29841,29848..29853,29926..29934,29992..29994)
/locus_tag="Caur_0025"
/note="molybdopterin cofactor binding site; other site"
/db_xref="CDD:73198"
misc_feature <30373..31632
/locus_tag="Caur_0025"
/note="Molybdopterin-Binding (MopB) domain of the MopB
superfamily of proteins, a large, diverse, heterogeneous
superfamily of enzymes that, in general, bind
molybdopterin as a cofactor. The MopB domain is found in a
wide variety of molybdenum- and...; Region:
Molybdopterin-Binding; cl09928"
/db_xref="CDD:209095"
misc_feature 31660..32130
/locus_tag="Caur_0025"
/note="This CD contains the molybdopterin_binding
C-terminal (MopB_CT) region of tetrathionate reductase,
subunit A, (TtrA); respiratory arsenate As(V) reductase,
catalytic subunit (ArrA); and other related proteins;
Region: MopB_CT_Tetrathionate_Arsenate-R; cd02780"
/db_xref="CDD:30312"
misc_feature order(31663..31689,31933..31935,32020..32022,32110..32115)
/locus_tag="Caur_0025"
/note="putative molybdopterin cofactor binding site; other
site"
/db_xref="CDD:30312"
gene 32700..33029
/locus_tag="Caur_0026"
/db_xref="GeneID:5828176"
CDS 32700..33029
/locus_tag="Caur_0026"
/note="TIGRFAM: alkylhydroperoxidase like protein, AhpD
family;
PFAM: Carboxymuconolactone decarboxylase;
KEGG: mca:MCA0351 carboxymuconolactone decarboxylase
domain protein"
/codon_start=1
/transl_table=11
/product="alkylhydroperoxidase"
/protein_id="YP_001633670.1"
/db_xref="GI:163845626"
/db_xref="InterPro:IPR003779"
/db_xref="InterPro:IPR004675"
/db_xref="GeneID:5828176"
/translation="MSQLPEAYRTFLQDYPTVAGVYEQLGAAAAEAGPLDAKTRELVK
LAMAAALGSEGAVHSHVHRALAAGATAAEIEHTLILGVTTLGFPTMMMALRWARTALH
QATSPQS"
misc_feature 32745..32993
/locus_tag="Caur_0026"
/note="Carboxymuconolactone decarboxylase family; Region:
CMD; pfam02627"
/db_xref="CDD:202318"
gene 33043..33672
/locus_tag="Caur_0027"
/db_xref="GeneID:5828177"
CDS 33043..33672
/locus_tag="Caur_0027"
/note="KEGG: rca:Rcas_2175 formylmethanofuran
dehydrogenase subunit E region"
/codon_start=1
/transl_table=11
/product="formylmethanofuran dehydrogenase subunit E"
/protein_id="YP_001633671.1"
/db_xref="GI:163845627"
/db_xref="GeneID:5828177"
/translation="MSVDDLIDTTSLELLVAPAPLADFLRQSSAMHRHLCPRQVLGAR
MGMYAGELLGLTLPQKNKRLYTFVETDGCFADGVSVTTGCWLGRRTMRLMDEGKVAAT
FVDTQTGQAFRIAPRPNVRDLARQYAPNARSRWHAYLIAYQLMPLTDLLIAQPITLTV
DLKAIISRNGLRTTCDHCGEEIINAREVIRDGQTLCRTCGGEGYYTITG"
misc_feature 33109..33660
/locus_tag="Caur_0027"
/note="Formylmethanofuran dehydrogenase subunit E [Energy
production and conversion]; Region: COG2191"
/db_xref="CDD:32374"
misc_feature 33130..33492
/locus_tag="Caur_0027"
/note="FmdE, Molybdenum formylmethanofuran dehydrogenase
operon; Region: FmdE; pfam02663"
/db_xref="CDD:202336"
misc_feature 33550..33657
/locus_tag="Caur_0027"
/note="Prokaryotic dksA/traR C4-type zinc finger; Region:
zf-dskA_traR; pfam01258"
/db_xref="CDD:201690"
gene complement(34058..34501)
/locus_tag="Caur_0028"
/db_xref="GeneID:5828178"
CDS complement(34058..34501)
/locus_tag="Caur_0028"
/note="TIGRFAM: iron-sulfur cluster assembly accessory
protein;
PFAM: HesB/YadR/YfhF-family protein;
KEGG: rrs:RoseRS_2111 iron-sulfur cluster assembly
accessory protein"
/codon_start=1
/transl_table=11
/product="iron-sulfur cluster assembly accessory protein"
/protein_id="YP_001633672.1"
/db_xref="GI:163845628"
/db_xref="InterPro:IPR000361"
/db_xref="GeneID:5828178"
/translation="MTTVDLNQITFQPATPQPLLTISEAASSRLLKMMQEKELEGYAL
RVFVAGGGCSGLQYGMTFDDEVREGDNEFYAGNLRVLVDPISAQYLFGASIDFVDTLM
GGGFKIDNPNAVSSCGCGHSFRARDTDYSEDDEDAPVGGCSACGM"
misc_feature complement(34130..34456)
/locus_tag="Caur_0028"
/note="Fe-S cluster assembly scaffold protein
[Posttranslational modification, protein turnover,
chaperones]; Region: sufA; COG0316"
/db_xref="CDD:30664"
gene complement(34623..36386)
/locus_tag="Caur_0029"
/db_xref="GeneID:5828179"
CDS complement(34623..36386)
/locus_tag="Caur_0029"
/note="TIGRFAM: protoheme IX farnesyltransferase;
PFAM: UbiA prenyltransferase;
KEGG: rca:Rcas_4304 protoheme IX farnesyltransferase"
/codon_start=1
/transl_table=11
/product="protoheme IX farnesyltransferase"
/protein_id="YP_001633673.1"
/db_xref="GI:163845629"
/db_xref="InterPro:IPR000537"
/db_xref="InterPro:IPR006369"
/db_xref="GeneID:5828179"
/translation="MAARSLMRILLVGLGLTLATIISGALVTISASATVCSSWPLCLE
ELVQSQNPLVWISLLHRLFVALALLAVFAGLVAVWRSSDTAGLPRITAGIAAAFFLLQ
ALAGALLVWGVPAMVADVWHLSGALLAFGAQSLTIALIAVPTPATPERLAGRAAQMQR
RLRSLAWWSAAAAGVAALAIGARSVVPGFGMMTAVPTNSVSAVGFAALLSVWMALEAR
RRLRPVAETPALALALPRYSLFLPALALLALLGAFIPVAGHLISLTAIALLWAATIIA
AVILQRVPFSFATATAGVRSQPAWRTVVADYISLTKPKVISLLLVTTLTTMFITEAGL
PSWWLVIWTMIGGYLAAGGAGAINCAFDSDIDINMGRTSRRPVPSGRISRRAAFIFGL
ILSVLSIIVLWVFTTPLAAFFALLGIIYYAWFYTGWLKRSTWQNIIIGGGAGAIPPLV
GWTAVTGSVSLMAVVLFAIIFYWTPPHFWALALVKQKDYARAGVPMLPVVAGEAETRW
QILVYSAIMVAVSLLPVAIGAMSWIYLIGAVVLGLRFMRDAWAVWRVGDQAAIWGLYK
YSLLYLALVFAAMVADRLIIG"
sig_peptide complement(36279..36386)
/locus_tag="Caur_0029"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.995) with cleavage site probability 0.354 at
residue 36"
misc_feature complement(34632..35486)
/locus_tag="Caur_0029"
/note="protoheme IX farnesyltransferase; Provisional;
Region: PRK04375"
/db_xref="CDD:179840"
gene complement(36402..36617)
/locus_tag="Caur_0030"
/db_xref="GeneID:5828180"
CDS complement(36402..36617)
/locus_tag="Caur_0030"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633674.1"
/db_xref="GI:163845630"
/db_xref="GeneID:5828180"
/translation="MIAWLIFWLAAIVAIGGQIPLILAAWRLYRQPFQQAPANVPRSD
GRADLGWTILTALATLALFGAAYLALP"
gene complement(36999..37940)
/locus_tag="Caur_0031"
/db_xref="GeneID:5828181"
CDS complement(36999..37940)
/locus_tag="Caur_0031"
/note="TIGRFAM: diguanylate cyclase;
PFAM: GGDEF domain containing protein; response regulator
receiver;
KEGG: rca:Rcas_3221 response regulator receiver modulated
diguanylate cyclase"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase"
/protein_id="YP_001633675.1"
/db_xref="GI:163845631"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:5828181"
/translation="MSEEVHLPTVLFADDDPHIRTLLSDTLTQAGFAVLAAEDGLSLI
RIAQEQLPDIILVDLMLPGVDGYEAIRQLRNDTRTAHLPIIIVTARANPSDVVIGFDT
GADDYITKPFNEAELVARIRSLLRRITKRPVRNPLTGLPGNVLIGEEIRYRLQRGEPF
TLLYTDINEFKAFNDKYGFARGDQVIRLVAELCEQAQQFFAPHAIFVGHIGGDDFVLL
CPSTVAADLARWLVDQFEQAALSLYDEEDRQRGYLVGYDRAGNLRHIPLATMAVGGVS
SRLDATVDELSREAAAMKHAAKVFGTSAVIIDHVRLR"
misc_feature complement(37575..37913)
/locus_tag="Caur_0031"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(37566..37910)
/locus_tag="Caur_0031"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(37608..37613,37620..37622,37677..37679,
37743..37745,37767..37769,37896..37901))
/locus_tag="Caur_0031"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(37767..37769)
/locus_tag="Caur_0031"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(37743..37751,37755..37760))
/locus_tag="Caur_0031"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(37605..37613)
/locus_tag="Caur_0031"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(37053..37541)
/locus_tag="Caur_0031"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(37302..37304,37443..37445))
/locus_tag="Caur_0031"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(37299..37310,37314..37316,37392..37394,
37404..37406,37416..37421,37428..37430))
/locus_tag="Caur_0031"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(37239..37241,37329..37331))
/locus_tag="Caur_0031"
/note="I-site; other site"
/db_xref="CDD:143635"
gene complement(37933..38877)
/locus_tag="Caur_0032"
/db_xref="GeneID:5828182"
CDS complement(37933..38877)
/locus_tag="Caur_0032"
/note="PFAM: Alcohol dehydrogenase zinc-binding domain
protein; Alcohol dehydrogenase GroES domain protein;
KEGG: rca:Rcas_3224 alcohol dehydrogenase GroES domain
protein"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase"
/protein_id="YP_001633676.1"
/db_xref="GI:163845632"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:5828182"
/translation="MRAIFFNGDLQYTTDYPDPVRQPGEALIRPHLVGICNTDLEITR
GYMNFRGVLGHEFVGTVVASDDPSWQGKRVVGEINAACRRCPTCLRGDVSHCPQRTTL
GIYRRDGAMADLFTLPEACLHEVPASVSDEAAVFTEPLAAALEIVEQSHIRPTERVAV
VGDGKLGAMIVQVLRLTGCELTLIGRHPERWDVYRQQGITCVRSTDLPGTLFDVVVDC
TGNPSGLNIARQIIRPRGRLILKSTFAAETQLNLSMVVVDEIQLIGSRCGPFAPALRL
LERGLIATTPLISARYPLAEGLQAFAAAPGQLKVLLSV"
misc_feature complement(37936..38877)
/locus_tag="Caur_0032"
/note="Medium chain dehydrogenases/reductase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR_like; cd08242"
/db_xref="CDD:176204"
misc_feature complement(37942..38877)
/locus_tag="Caur_0032"
/note="Threonine dehydrogenase and related Zn-dependent
dehydrogenases [Amino acid transport and metabolism /
General function prediction only]; Region: Tdh; COG1063"
/db_xref="CDD:31263"
misc_feature complement(order(38077..38085,38152..38157,38215..38217,
38221..38226,38272..38274,38308..38310,38320..38325,
38377..38394,38452..38454,38464..38466,38755..38757,
38764..38772))
/locus_tag="Caur_0032"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176204"
misc_feature complement(order(38464..38466,38713..38715,38764..38766,
38770..38772))
/locus_tag="Caur_0032"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176204"
misc_feature complement(order(38590..38592,38614..38616,38623..38625,
38632..38634))
/locus_tag="Caur_0032"
/note="structural Zn binding site [ion binding]; other
site"
/db_xref="CDD:176204"
gene 39515..40447
/locus_tag="Caur_0033"
/db_xref="GeneID:5828183"
CDS 39515..40447
/locus_tag="Caur_0033"
/note="TIGRFAM: methionyl-tRNA formyltransferase;
PFAM: formyl transferase domain protein;
KEGG: rrs:RoseRS_3920 methionyl-tRNA formyltransferase"
/codon_start=1
/transl_table=11
/product="methionyl-tRNA formyltransferase"
/protein_id="YP_001633677.1"
/db_xref="GI:163845633"
/db_xref="InterPro:IPR002376"
/db_xref="InterPro:IPR005793"
/db_xref="InterPro:IPR005794"
/db_xref="GeneID:5828183"
/translation="MRILFLGSPSFAVHALEALVAAGHEIVGVVTQPDRPAGRDRRLT
PPPVKIAAMAHNLPVLQPETLRDPTVVETLSALQPEVGVVAAYGEILRRAVLSIPPLG
YLNIHPSLLPLYRGPTPVAGAILAGETVTGVTIMLLDPSMDSGPILAQAVVDLPPTAR
AGQLTDELFRIGADLLVQVLPRYARGEIEPRPQDHSRATVTKMLKKEDGRIDWSLPAI
VIERMTRAYDPWPGAYTFWRGQPLRIIKAAVASADGTNVPGTVIGRSGSGHPLVQTGS
DALELIEVQPASRRPMSGSAWLAGVHADNIRLGE"
misc_feature 39515..40441
/locus_tag="Caur_0033"
/note="methionyl-tRNA formyltransferase; Reviewed; Region:
fmt; PRK00005"
/db_xref="CDD:178787"
misc_feature 39515..40126
/locus_tag="Caur_0033"
/note="Methionyl-tRNA formyltransferase, N-terminal
hydrolase domain; Region: FMT_core_Met-tRNA-FMT_N;
cd08646"
/db_xref="CDD:187715"
sig_peptide 39515..39562
/locus_tag="Caur_0033"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.788) with cleavage site probability 0.667 at
residue 16"
misc_feature order(39533..39535,39545..39550,39764..39787,39800..39802,
39827..39838,39860..39862,39920..39922,39926..39931,
39938..39943)
/locus_tag="Caur_0033"
/note="putative active site [active]"
/db_xref="CDD:187715"
misc_feature order(39536..39541,39545..39547,39608..39610,39620..39622,
39626..39637,39767..39778,39827..39829,39833..39838,
39860..39868,40121..40123)
/locus_tag="Caur_0033"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187715"
misc_feature order(39764..39766,39773..39775,39779..39787,39800..39802,
39827..39829,39926..39931,39938..39943)
/locus_tag="Caur_0033"
/note="putative cosubstrate binding site; other site"
/db_xref="CDD:187715"
misc_feature order(39827..39829,39833..39835,39941..39943)
/locus_tag="Caur_0033"
/note="catalytic site [active]"
/db_xref="CDD:187715"
misc_feature 40133..40396
/locus_tag="Caur_0033"
/note="C-terminal domain of Formyltransferase and other
enzymes; Region: Met_tRNA_FMT_C; cd08704"
/db_xref="CDD:187732"
misc_feature order(40202..40204,40235..40237,40241..40243,40367..40369,
40373..40375,40379..40384,40388..40390)
/locus_tag="Caur_0033"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187732"
gene 41293..41727
/locus_tag="Caur_0034"
/db_xref="GeneID:5828184"
CDS 41293..41727
/locus_tag="Caur_0034"
/note="KEGG: rca:Rcas_0831 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633678.1"
/db_xref="GI:163845634"
/db_xref="GeneID:5828184"
/translation="MPFFKDEAELRQILGELYDRVKCDAQIAPRICEGRIVIQFRYEE
PHGVVTIDAAHPPTQPGAFCDVFWGEVDLKPDVEMSMKADIAHQFWHGKINLMTALAR
RQIIAKGPIPKILKLLPAVEPMYTLYPRMLREMGREDLVLTR"
gene 41762..42337
/locus_tag="Caur_0035"
/db_xref="GeneID:5828185"
CDS 41762..42337
/locus_tag="Caur_0035"
/note="KEGG: rrs:RoseRS_4479 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633679.1"
/db_xref="GI:163845635"
/db_xref="GeneID:5828185"
/translation="MYERGAADAERGEFNPFYYQHYYYYRQGYDSVRRRNRPGINRVG
ILLISGIGVVGLVALVWLIGRIGPAVVAQPVASPTTVATTPQPSPIPPTPTPLPSPTP
IPTEAPPTLQVGGRAVVVNVGEAALRLRASPGLTARVIARIPAGREVVLLEGPIEVDG
YTWWRVEVGSQSGWCAVATPDGLTFLEPVAP"
gene complement(42729..43412)
/locus_tag="Caur_0036"
/db_xref="GeneID:5828186"
CDS complement(42729..43412)
/locus_tag="Caur_0036"
/note="PFAM: phospholipid/glycerol acyltransferase;
KEGG: rca:Rcas_2771 phospholipid/glycerol acyltransferase"
/codon_start=1
/transl_table=11
/product="phospholipid/glycerol acyltransferase"
/protein_id="YP_001633680.1"
/db_xref="GI:163845636"
/db_xref="InterPro:IPR002123"
/db_xref="GeneID:5828186"
/translation="MFAYVVYGILYLIINFFRLIGWWRWSISGIERLPPREQGGMILV
MNHINWVDIPAVGAMLPFRYRLSWLAKIEIFSHPLAGWFFRNMDVIPIRRGKRDLAAL
DAAAQALRNGAVLLIFPEGHRSRNGILQPGRGGAVRLAMQAGVPLVPMAITGTEHGFR
GTLLRKPVHITIGEPYRVEPLPDNKIPADVMEQLTNEMMLKIAAMLPPAQRGPYAALL
EAAAVKEQV"
misc_feature complement(42732..43412)
/locus_tag="Caur_0036"
/note="1-acyl-sn-glycerol-3-phosphate acyltransferase
[Lipid metabolism]; Region: PlsC; COG0204"
/db_xref="CDD:30553"
misc_feature complement(42831..43373)
/locus_tag="Caur_0036"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: AGPAT-like; Region:
LPLAT_AGPAT-like; cd07989"
/db_xref="CDD:153251"
misc_feature complement(order(43044..43052,43194..43205,43257..43259,
43263..43265,43272..43274))
/locus_tag="Caur_0036"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153251"
gene complement(43420..43860)
/locus_tag="Caur_0037"
/db_xref="GeneID:5828187"
CDS complement(43420..43860)
/locus_tag="Caur_0037"
/note="KEGG: rrs:RoseRS_2830 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633681.1"
/db_xref="GI:163845637"
/db_xref="GeneID:5828187"
/translation="MYALHPATVHIPIGLLLASSLFTFIALRTGRMQWEQSSFHCLIF
GLLGAVIAMVSGLIDAARQVTSPQIAPDDPVIMWINGHAAASLAATLCYGRVWLMRRR
QPGLLTDSTQRNAYLGWHVAGIVLLVLGGWLGGRLVFEFNLGRL"
misc_feature complement(<43681..43860)
/locus_tag="Caur_0037"
/note="Predicted membrane protein (DUF2231); Region:
DUF2231; cl01730"
/db_xref="CDD:154556"
gene complement(43869..44489)
/locus_tag="Caur_0038"
/db_xref="GeneID:5828188"
CDS complement(43869..44489)
/locus_tag="Caur_0038"
/note="PFAM: protein of unknown function UPF0029; Domain
of unknown function DUF1949;
KEGG: mxa:MXAN_2845 conserved hypothetical protein
TIGR00257"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633682.1"
/db_xref="GI:163845638"
/db_xref="InterPro:IPR001498"
/db_xref="InterPro:IPR015269"
/db_xref="InterPro:IPR015796"
/db_xref="GeneID:5828188"
/translation="MTSPHYPVPAGTARTELIVRGSRFIAQLFPTPTVDAAREAIAMV
RAAMPDATHHCYAYLVGYGQSTIAGMSDDGEPAGSAGRPMMAVLRGADLGDVTVVVTR
YFGGTLLGIGGLVRAYSDATRAVLEIVPRTQRVIYQRIIVHLQYSDYTAIRRLLEAHA
AVIVEEVFAVDVVITADLPTDHVAVVNHQIGEISAGRARLETAPMV"
misc_feature complement(43890..44489)
/locus_tag="Caur_0038"
/note="uncharacterized protein, YigZ family; Region:
IMPACT_YIGZ; TIGR00257"
/db_xref="CDD:129359"
misc_feature complement(44109..44435)
/locus_tag="Caur_0038"
/note="Uncharacterized protein family UPF0029; Region:
UPF0029; pfam01205"
/db_xref="CDD:201661"
gene complement(44486..45361)
/locus_tag="Caur_0039"
/db_xref="GeneID:5828216"
CDS complement(44486..45361)
/locus_tag="Caur_0039"
/note="KEGG: rrs:RoseRS_2063 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633683.1"
/db_xref="GI:163845639"
/db_xref="InterPro:IPR001680"
/db_xref="GeneID:5828216"
/translation="MRTFISGIPTPKPALFFSRAARDQAVIFDPACAPLLRPVVDRES
LQPWYTPTGERWLLTLPHGYSQRLGINSFADLVRHHPGLQRHLREYADDPEPYWWELP
AAATAVLTAPTPRICIGDGDQVCLSWDAGQAVVLAPVRMVAPADHLTLALLASTKGKQ
MIRQAHDTFTLPPVPTAIGGRLAELAAQAVTMAHERHTLSREFARRLLADFGPPGSTL
SPLLERWWELEFRDLLAEVARALRNPIPEPFQPFWLARHTEGRARYYTLTAEIAALEA
AIDEIVHPLWPEELP"
gene 45522..49011
/locus_tag="Caur_0040"
/pseudo
/db_xref="GeneID:5828217"
gene 49439..50515
/locus_tag="Caur_0041"
/db_xref="GeneID:5828218"
CDS 49439..50515
/locus_tag="Caur_0041"
/EC_number="1.1.1.85"
/note="catalyzes the oxidation of 3-isopropylmalate to
3-carboxy-4-methyl-2-oxopentanoate in leucine
biosynthesis"
/codon_start=1
/transl_table=11
/product="3-isopropylmalate dehydrogenase"
/protein_id="YP_001633684.1"
/db_xref="GI:163845640"
/db_xref="InterPro:IPR001804"
/db_xref="InterPro:IPR004429"
/db_xref="GeneID:5828218"
/translation="MQAVIAVLPGDGIGPEVVAEGVKVLQAIARRFGHQFTFHEALIG
GCAIDATGEPLPAATITLCQSADAVLLGAVGGPKWDDPQARVRPEQGLLGIRKALGLF
ANLRPVRIYPQLINASPIRPERLQGVDLIVVRELTGGIYFGEKRRERTADGEWASDLC
IYTEEEIVRVVRVAARLARQRRGKVTLVDKANVLETSRLWRSITTRLMQTEFPDLQFE
TMLVDACAMHLIRRPADFDVIVTENMFGDILTDEASMLAGSMGMLPSASLADGRLGLY
EPIHGSAPDIAGQGKANPLATILSVAMLLRYSLDLPAEADCVEAAVASVIERGIVTAD
IAVPGQAAYSTAAVGDAVVAAIAA"
misc_feature 49439..50473
/locus_tag="Caur_0041"
/note="3-isopropylmalate dehydrogenase; Provisional;
Region: PRK00772"
/db_xref="CDD:179119"
misc_feature 49442..50443
/locus_tag="Caur_0041"
/note="tartrate dehydrogenase; Provisional; Region:
PRK08194"
/db_xref="CDD:181281"
gene 50585..50992
/locus_tag="Caur_0042"
/db_xref="GeneID:5828219"
CDS 50585..50992
/locus_tag="Caur_0042"
/note="PFAM: cobalamin B12-binding domain protein;
KEGG: rca:Rcas_2998 cobalamin B12-binding domain protein"
/codon_start=1
/transl_table=11
/product="cobalamin B12-binding domain-containing protein"
/protein_id="YP_001633685.1"
/db_xref="GI:163845641"
/db_xref="InterPro:IPR006158"
/db_xref="InterPro:IPR006159"
/db_xref="GeneID:5828219"
/translation="MERKIRVLVAKPGLDGHDRGAKVIARALRDAGMEVIYTGLQQTP
QMIVEAALQEDVDVIGLSILSGAHMTLLPKVMQLLREQGMTDVLVVAGGIISDEDAEI
LKREHGIAEVFGPGSSTQAIIDFIRSHVELTRG"
misc_feature 50600..50968
/locus_tag="Caur_0042"
/note="methylmalonyl CoA mutase B12 binding domain. This
domain binds to B12 (adenosylcobamide), which initiates
the conversion of succinyl CoA and methylmalonyl CoA by
forming an adenosyl radical, which then undergoes a
rearrangement exchanging a hydrogen atom...; Region:
MM_CoA_mut_B12_BD; cd02071"
/db_xref="CDD:30209"
misc_feature order(50624..50644,50651..50653,50762..50770,50774..50782,
50864..50866,50921..50923,50930..50932,50948..50950)
/locus_tag="Caur_0042"
/note="B12 binding site [chemical binding]; other site"
/db_xref="CDD:30209"
misc_feature 50633..50635
/locus_tag="Caur_0042"
/note="cobalt ligand [ion binding]; other site"
/db_xref="CDD:30209"
gene 50996..51946
/locus_tag="Caur_0043"
/db_xref="GeneID:5828220"
CDS 50996..51946
/locus_tag="Caur_0043"
/note="TIGRFAM: LAO/AO transport system ATPase;
PFAM: ArgK protein;
SMART: AAA ATPase;
KEGG: rrs:RoseRS_2025 LAO/AO transport system ATPase"
/codon_start=1
/transl_table=11
/product="LAO/AO transport system ATPase"
/protein_id="YP_001633686.1"
/db_xref="GI:163845642"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005129"
/db_xref="GeneID:5828220"
/translation="MSEHELVTRLRNGERRALARAISLVEQGGPTARALLAAAYPYGS
AHRVGITGPPGAGKSTLVTALAQEWRKRGVPVGIVAVDPSSPFSGGAVLGDRIRMQAL
GGDPGVFIRSMASRGRMGGLARATADAVTLIAAAGFPVILIETVGAGQDEVDIAQAAD
TTIVVEVPGMGDDVQSIKAGMLEIADVFVVNKADRPGVDQTVRQLRTMLNLGAPPVDG
WMPPVLTAIATTGEGCAQIVDAVEQHRQHLIASNSQSQRALSAAERELTAAVQELVLE
RLRGSRWSELVQQIAARQRDPYAAANELLTADVIVRDGEE"
misc_feature 51047..51838
/locus_tag="Caur_0043"
/note="ArgK protein; Region: ArgK; pfam03308"
/db_xref="CDD:112137"
misc_feature 51134..51577
/locus_tag="Caur_0043"
/note="The function of this protein family is unkown. The
protein sequences are similar to the ArgK protein in E.
coli. ArgK protein is a membrane ATPase which is required
for transporting arginine, ornithine and lysine into the
cells by the arginine and...; Region: ArgK-like; cd03114"
/db_xref="CDD:48378"
misc_feature 51149..51175
/locus_tag="Caur_0043"
/note="Walker A; other site"
/db_xref="CDD:48378"
gene 52177..53520
/locus_tag="Caur_0044"
/db_xref="GeneID:5828221"
CDS 52177..53520
/locus_tag="Caur_0044"
/EC_number="5.4.2.8"
/note="PFAM: phosphoglucomutase/phosphomannomutase ;
phosphoglucomutase/phosphomannomutase alpha/beta/alpha
domain I; phosphoglucomutase/phosphomannomutase
alpha/beta/alpha domain II;
phosphoglucomutase/phosphomannomutase alpha/beta/alpha
domain III;
KEGG: rca:Rcas_1218 phosphomannomutase"
/codon_start=1
/transl_table=11
/product="phosphomannomutase"
/protein_id="YP_001633687.1"
/db_xref="GI:163845643"
/db_xref="InterPro:IPR005841"
/db_xref="InterPro:IPR005843"
/db_xref="InterPro:IPR005844"
/db_xref="InterPro:IPR005845"
/db_xref="InterPro:IPR005846"
/db_xref="GeneID:5828221"
/translation="MQVNPTIFKAYDIRGIYPTELNEEVAYLIGRAFVTFLGAETVIV
GRDMRTSGPALFDAVTRGIMDQGADVADIGMVSTDQYYFACTQLGFPGMMVTASHNPK
QYNGFKMVRRMPYLLSGDEGIQDLRRLVESEAFPTPTRRGQRREYDFKEQFVQKVLSL
IDVDAIKPLKVIVDTGNGMVGPILQEVYARLPIQLTGMYLDPDGTLPNHGLDPLMPEN
RAELQQRVKDEGADIGFAFDGDGDRFFAIDDRGEFISGDFLTAILGRYLLEKEPGAKI
LYDVRASWAVPDEVRAAGGVPLVERVGHAFIKRRMANEDAIFAGEVSGHYYFKAFAFA
DSGIIPSLYLLEMLSKRGVKMSELLGRLESRYFISGEINSRVSDVAAKLNEIAERYSD
GKIERIDGVSVSYDTWHFNVRGSNTEPLIRLNLESIASREEMEAKRDEVLAVIRS"
misc_feature 52195..53511
/locus_tag="Caur_0044"
/note="The phosphomannomutase/phosphoglucomutase (PMM/PGM)
bifunctional enzyme catalyzes the reversible conversion of
1-phospho to 6-phospho-sugars (e.g. between
mannose-1-phosphate and mannose-6-phosphate or
glucose-1-phosphate and glucose-6-phosphate) via a...;
Region: PMM_PGM; cd03089"
/db_xref="CDD:100091"
misc_feature 52198..53517
/locus_tag="Caur_0044"
/note="phosphomannomutase/phosphoglucomutase; Reviewed;
Region: manB; PRK09542"
/db_xref="CDD:181937"
misc_feature order(52201..52203,52207..52209,52216..52218,52468..52476,
52498..52500,52888..52890,52894..52896,52900..52905,
53017..53019,53080..53088,53137..53139,53143..53145,
53149..53151,53413..53415,53419..53427)
/locus_tag="Caur_0044"
/note="active site"
/db_xref="CDD:100091"
misc_feature order(52207..52209,52216..52218,52468..52470,52903..52905,
53017..53019,53080..53082,53086..53088,53137..53139,
53143..53145,53149..53151,53413..53415,53419..53427)
/locus_tag="Caur_0044"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100091"
misc_feature order(52468..52470,52888..52890,52894..52896,52900..52902)
/locus_tag="Caur_0044"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:100091"
gene 53777..54850
/locus_tag="Caur_0045"
/db_xref="GeneID:5828222"
CDS 53777..54850
/locus_tag="Caur_0045"
/note="KEGG: rrs:RoseRS_2617 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633688.1"
/db_xref="GI:163845644"
/db_xref="InterPro:IPR011761"
/db_xref="GeneID:5828222"
/translation="MSVKKIGILVGREWSWPPAYIEEVNRRNAGVRAEFIKLGGTRMA
EFCDYDVIIDRISHEIPYYRTFLKTAALSGTRIVNNPFWWSADDKFFGASLATALGIP
HPRTVALPSHSYIEGIVEESLRNLQYPIPWKEHVDYVGGFPVILKPAWGGGFKKVYKV
HSYEELWRAYNETGIECMMLQEYIAWEKYVRCIVIGRRHIMTIKFDANAPWPHRYFRD
DNYLTPEEGLQVVEGALKLNQALGYDMNTVEFAIRNGVAYAIDFTNPAPDFDVNSLTP
HYFDWVVRTMADFTIELALQGRAKPEEFAWHRLLNGPMAPATSPSAPVTTDSANNDPP
AAEASATPKRRRTTRKKTAEEPS"
misc_feature 54032..54508
/locus_tag="Caur_0045"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl03087"
/db_xref="CDD:207834"
gene 54907..56289
/locus_tag="Caur_0046"
/db_xref="GeneID:5828223"
CDS 54907..56289
/locus_tag="Caur_0046"
/note="PFAM: protein of unknown function DUF407;
KEGG: rrs:RoseRS_2616 protein of unknown function DUF407"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633689.1"
/db_xref="GI:163845645"
/db_xref="InterPro:IPR007302"
/db_xref="GeneID:5828223"
/translation="MTLAQAIADYHALLEPTLAVESWQRLTAEMRARRLYFGERPLAT
VLRPRLITASQYELLRRGTQQVAEAARAIVAAALDSSEAGQAVREVLMLTPLEERLIE
MHPGYLEPSAHSRMDTFLTVDGSSLQFVEYNAESPAAIAYEDLLAQAFLAMPVMQEFA
KRYPILPLPARQYLLRTLLDCWRAAGSPGHEPQVAIVDWHGVPTATEFEMFRQYFVEH
GLPAVICAPQDLSFRDGQLLAPTPDGGEMPVTIVFKRVLTSEFLTHYGEEALSHPLVQ
AYAAGACVIVNSFRAKLLHKKSLFALLSDERFHDPLSADQRAAVAAHVPWTRVVRPGT
TTYQGEQIDLLSFARANRERLLLKPNDEYGGKGITIGWEVSADEWDAALQAALSSPFV
VQERVTIAYEPYPALIDGKVVIGERLVDSDPFLFGTEVNGCLCRLSTVTLLNVTAGGG
STVPVFIIDE"
misc_feature 54913..56286
/locus_tag="Caur_0046"
/note="Circularly permuted ATP-grasp type 2; Region:
CP_ATPgrasp_2; pfam14403"
/db_xref="CDD:206571"
gene 56310..57092
/locus_tag="Caur_0047"
/db_xref="GeneID:5828224"
CDS 56310..57092
/locus_tag="Caur_0047"
/note="PFAM: periplasmic binding protein;
KEGG: rca:Rcas_2937 periplasmic binding protein"
/codon_start=1
/transl_table=11
/product="periplasmic binding protein"
/protein_id="YP_001633690.1"
/db_xref="GI:163845646"
/db_xref="InterPro:IPR002491"
/db_xref="GeneID:5828224"
/translation="MLVYDALGREIELAGTPQRIVSLVPSVTEWLFSVGAGERVIGIT
DYCIEPAAALQHLPRLRGTKNPDRAAIIALQPDLIIAEQEENRERDVQALTAAGLAVY
VTAIRSVADAMTQLAALAEVLDVTDGAAPITQAIEQTVTAPPPPSRRVLALIWRDPWM
AIGRDTYAGDLLRLSGGFNVAATLPGRYPRAALADFLALDPDIILLPNEPYPFSERDL
PAFNAVAYRGRIVLCDGMALTWPGPRTATAITTFRRILEQTT"
misc_feature 56310..>56873
/locus_tag="Caur_0047"
/note="ABC-type Fe3+-hydroxamate transport system,
periplasmic component [Inorganic ion transport and
metabolism]; Region: FepB; COG0614"
/db_xref="CDD:30959"
misc_feature 56361..>56879
/locus_tag="Caur_0047"
/note="Helical backbone metal receptor (TroA-like domain).
These proteins have been shown to function in the ABC
transport of ferric siderophores and metal ions such as
Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site
is formed in the interface between...; Region: TroA-like;
cl00262"
/db_xref="CDD:199270"
misc_feature order(56583..56588,56595..56597,56670..56672)
/locus_tag="Caur_0047"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:29734"
gene 57089..57967
/locus_tag="Caur_0048"
/db_xref="GeneID:5828225"
CDS 57089..57967
/locus_tag="Caur_0048"
/note="PFAM: protein of unknown function DUF547;
KEGG: gur:Gura_3347 protein of unknown function DUF547"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633691.1"
/db_xref="GI:163845647"
/db_xref="InterPro:IPR006869"
/db_xref="GeneID:5828225"
/translation="MNPFIRLREAVIDTVLSINEQQVLNAGTGTVPAPTDDGVALAAA
LRQAMQQFKAQAMDEEGKLVAYQRLRNDPAYLAYRSELTPQLQRFDPASLPDRATRLA
FWINLYNALVIDAVIAFGITTSVADQWSGLRFFRAAAYQIGGLRCSLDDIEHGILRAN
RGHPFIPGPQFAASDPRLGWIIDPPDPRIHFALNCASLSCPPIGVYRAEQIDQQLDLA
LRAFVAADVAIDPTRAEIHLSRIFDWYREDFGGTDGIIQLLRQALPADERRAWLLQAR
QARLIYRPYDWRLNLA"
misc_feature 57350..57757
/locus_tag="Caur_0048"
/note="Protein of unknown function, DUF547; Region:
DUF547; pfam04784"
/db_xref="CDD:191092"
gene 57978..58508
/locus_tag="Caur_0049"
/db_xref="GeneID:5828226"
CDS 57978..58508
/locus_tag="Caur_0049"
/note="KEGG: gur:Gura_0093 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633692.1"
/db_xref="GI:163845648"
/db_xref="GeneID:5828226"
/translation="MTDDWRKQSLKELYRLTGQIFSQIPALARLWGSAYRALNFDEIP
FTPFRKPLHEARLALITTGGVHLRDQPPFDMADPRGDPTYRRIPATTPLSDLTITHDY
YDHSDAERDLNILFPLDLVRTLVQRGIIGSLADCYGFMGHIEPPHLTTLLQQTAPEVA
TFLKQEQVDAVLLTPA"
misc_feature <58095..>58499
/locus_tag="Caur_0049"
/note="glycine reductase, selenoprotein B; Region:
gly_red_sel_B; TIGR01917"
/db_xref="CDD:130972"
gene 58527..58823
/locus_tag="Caur_0050"
/db_xref="GeneID:5828227"
CDS 58527..58823
/locus_tag="Caur_0050"
/note="KEGG: bbr:BB4888 putative reductase"
/codon_start=1
/transl_table=11
/product="putative reductase"
/protein_id="YP_001633693.1"
/db_xref="GI:163845649"
/db_xref="GeneID:5828227"
/translation="MGLIARIIEAAGISTVCIVSLKPIAEQVRPPRTLHLAWPFGHPL
GEPGNRAQQLSVLHAALQALATAEPGAIIEPGWRWRREIYTPPPDWLGEGKERL"
gene 58908..59567
/locus_tag="Caur_0051"
/db_xref="GeneID:5828228"
CDS 58908..59567
/locus_tag="Caur_0051"
/note="KEGG: rca:Rcas_2036 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633694.1"
/db_xref="GI:163845650"
/db_xref="GeneID:5828228"
/translation="MVNKDHPLSIGRTIRHAIFFNARNWQSGRPIMDELLQSVNELFA
MLTERNVRYTLVGGIAMLQYIQGRNTEDIDIVISITSLRKLPEVTITQKDIFFARGMY
RQLQIDFLLTKNPLFAHIQKHHVVELPFAERTIPTATVRGLILLKLYALPSLYRQGDF
ARVGLYENDIATLMFAYAPPIDDILHELSAFISQPDRDIAQGIVHNLEQRILRFKALR
G"
gene 60158..61117
/locus_tag="Caur_0052"
/db_xref="GeneID:5828189"
CDS 60158..61117
/locus_tag="Caur_0052"
/note="KEGG: rrs:RoseRS_2582 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633695.1"
/db_xref="GI:163845651"
/db_xref="GeneID:5828189"
/translation="MEGTTNPTTAPTAQLAPAEAIDPRPLDTAGMEECSIISDSDLES
IVNSVPIYSQPTYAEYGTLGCTYTFEGDKDVSIRIELDSPGRQVYDSVMQYVDVSADA
EPVNIGDIAVIKEKDGLVSLDAVLNGWYVSLSTRGFPRASALTLAQWLTGRLIPRPDD
IVAEQPTATAPGPVSGSLIDMQVTIESPAEAAGVTTLAEIKAIGFMGFSMCSRPYNVP
FIVAFNAPPGTQPPTPVGVFSITAEAGVTPGQPSPATIIIGIGPSDAAEETLWQGTIV
VAADGTSGTFEVPGQVKVPGRACLRRERGTTISVILVWRGIEA"
gene complement(61181..62830)
/locus_tag="Caur_0053"
/db_xref="GeneID:5828190"
CDS complement(61181..62830)
/locus_tag="Caur_0053"
/note="PFAM: Methionine biosynthesis MetW protein;
Methyltransferase type 11; Methyltransferase type 12;
KEGG: vha:VIBHAR_01393 hypothetical protein"
/codon_start=1
/transl_table=11
/product="type 11 methyltransferase"
/protein_id="YP_001633696.1"
/db_xref="GI:163845652"
/db_xref="InterPro:IPR010743"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:5828190"
/translation="MADAETIRSYDQLAREQAAFQRHLQPTAIYRLVETFFHPGRPTI
DIGSGSGRDVAWLNQHGYQAIGLEPSAGMIAEARAAYAGIEIRQGALPDLAGIADASF
DNVLCVAVLMHLPAAELIGAVINLARILRPGGRLIVSYRTPPPEGERAHDGRLYTVIP
PARLMLLLESSGLQILFSEDLPDPHRPSIRWFNMVAEKSDRDVSRGLERVGSVLAHDR
KTATYKLALLRALCIIARNAFNLVEWSSDVVYVLLRAIATQWLIFYWPLLTSSEFIAQ
IRGEHPLSPKPIAFRPAITSLAKQLGGAAGLYNVLRILEEDPHRYDDILKLIANTIRK
GPVTYSGSIHSPIFSYRPGKSDTFGWVAVPIDIWLDICRFNHWIEDSIVLRWAYLTDE
LNRTADPGRYLSLLVAKPLHERDTQEVRQALNRSPELFCVWTGQRLGHGYEVDHVIPY
SVWGNNDLWNLLPAHPRINQTKRDALPARSILLARREAIIDYWQRYAQIDVFQPRFAV
QIHRALGCNLRHADWPKLAFAGLEEVVERTAIVRGLPRWSP"
misc_feature complement(62303..62773)
/locus_tag="Caur_0053"
/note="Methyltransferase domain; Region: Methyltransf_23;
pfam13489"
/db_xref="CDD:205667"
misc_feature complement(62411..62701)
/locus_tag="Caur_0053"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(62507..62509,62558..62566,62624..62629,
62675..62695))
/locus_tag="Caur_0053"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
misc_feature complement(61415..>61543)
/locus_tag="Caur_0053"
/note="HNH nucleases; HNH endonuclease signature which is
found in viral, prokaryotic, and eukaryotic proteins. The
alignment includes members of the large group of homing
endonucleases, yeast intron 1 protein, MutS, as well as
bacterial colicins, pyocins, and...; Region: HNHc;
cd00085"
/db_xref="CDD:28969"
misc_feature complement(order(61424..61426,61433..61438,61448..61453,
61484..61486,61490..61498,61502..61504))
/locus_tag="Caur_0053"
/note="active site"
/db_xref="CDD:28969"
gene complement(62849..64306)
/locus_tag="Caur_0054"
/db_xref="GeneID:5828191"
CDS complement(62849..64306)
/locus_tag="Caur_0054"
/note="PFAM: glycoside hydrolase family 57; Domain of
unknown function DUF1957;
KEGG: rrs:RoseRS_3734 glycoside hydrolase, family 57"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633697.1"
/db_xref="GI:163845653"
/db_xref="InterPro:IPR004300"
/db_xref="InterPro:IPR015293"
/db_xref="GeneID:5828191"
/translation="MPIAFVIEVHVPYLRHPGRQPIGEERLHAFTAHTLIPLLDLIGE
LQRHSLPLSITLACSPIALEQWRDPVVHKHFVQWLEGRITHHQNELSRFEHEGNQHGA
YLARFYLDWDRQLLRSFTIRYQRNPLGRLQELVAAGLITPLCVPASYAILPFLGHEGM
VRAQLEHGLLYISRYLKRPEGLWLPGSAWRDGLERIILELDLRYVIVDPSNVQLQHGH
LPGWLVPRRLAAIGVEADLARHIWSVELGYPGDPLYRNPADPTGYTANGADAPQPYDP
YDALRRAQEHANHFVDQLLFRLSQLPSETTLVVPIDARLWSRNWFEGPTWLQAVLTRC
ATDPRLRLTQPGSLLHHLSSNDTVVLQATAQADASATSWQSPFTDHYRQSLYEAERRF
AELVTYYPAAEGLRERVLTQAARELLLAEMSDWLMESDPGWQRYLDRFDHLLLLARQE
SLSATDLFALEQIESHDSIFPVLNYRLFGEKHHRS"
misc_feature complement(62864..64300)
/locus_tag="Caur_0054"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1543"
/db_xref="CDD:31732"
misc_feature complement(63233..64300)
/locus_tag="Caur_0054"
/note="Catalytic NodB homology domain of the carbohydrate
esterase 4 superfamily; Region: CE4_SF; cl15692"
/db_xref="CDD:213138"
misc_feature complement(62873..63154)
/locus_tag="Caur_0054"
/note="Domain of unknown function (DUF1957); Region:
DUF1957; pfam09210"
/db_xref="CDD:204166"
gene complement(64394..66088)
/locus_tag="Caur_0055"
/db_xref="GeneID:5828192"
CDS complement(64394..66088)
/locus_tag="Caur_0055"
/note="PFAM: protein kinase;
SMART: tyrosine protein kinase; serine/threonine protein
kinase;
KEGG: rca:Rcas_1479 serine/threonine protein kinase"
/codon_start=1
/transl_table=11
/product="protein kinase"
/protein_id="YP_001633698.1"
/db_xref="GI:163845654"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR000976"
/db_xref="InterPro:IPR001245"
/db_xref="InterPro:IPR002290"
/db_xref="GeneID:5828192"
/translation="MTGGSGRRIGRYELIEELGRGGMARVYRARDTQLQRIVALKVLA
AQLSMDAEFIKRFEREARTAANLRHPHIVTVYDIGEDQGLHYIAMEYIDGRPLHAILE
QYGSLGLKYAIAILEPIALALDYAHQAGAVHRDVKPHNILIDRNGRVVLTDFGIAQTP
EADEQRLTRTGVFMGTPEYISPEQAEARRVDGRSDLYSLAVVAYEIIAGRVPFSGATP
QLIVAHAQLPPPPITSFAPDLPTDLDLVLTRALAKRPERRFQTGAAFIAALRDIAERN
GIVPATTAELVALLNPSLQVESTIPGLVQSSATPKPVAPPLLSSTPTASRQPKQPDGL
AVNQDQRATPLPPAPVIPRRHLPEPAVAEPKPRNNRSDQWPFFIIGGLLFIIVGALVV
LIMRNFDDSDAPTPTPIVPAGPSPTLAVPLPTATATFTAVPTLTPTLTPSVEPTPTPV
LPTPVPPTSPPPPPPPPPPSPTPTVTATPTETVTPTVSLTPTEPATPTETATPTETAT
PTETATPTETTTPTVSPTPTETATPTVSPTPTETTTPTVSPTPTETATPTVSPTPT"
misc_feature complement(65312..66055)
/locus_tag="Caur_0055"
/note="Serine/Threonine protein kinases, catalytic domain;
Region: S_TKc; smart00220"
/db_xref="CDD:197582"
misc_feature complement(65471..66037)
/locus_tag="Caur_0055"
/note="Catalytic domain of Protein Kinases; Region: PKc;
cd00180"
/db_xref="CDD:173623"
misc_feature complement(order(65555..65566,65621..65623,65630..65632,
65663..65665,65669..65674,65678..65680,65684..65686,
65795..65797,65801..65803,65813..65824,65870..65872,
65966..65968,65972..65974,66011..66013,66023..66037))
/locus_tag="Caur_0055"
/note="active site"
/db_xref="CDD:173623"
misc_feature complement(order(65630..65632,65663..65665,65669..65674,
65678..65680,65684..65686,65801..65803,65813..65824,
65870..65872,65966..65968,65972..65974,66011..66013,
66023..66037))
/locus_tag="Caur_0055"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:173623"
misc_feature complement(order(65555..65566,65621..65623,65672..65674,
65678..65680,65684..65686,65795..65797,65801..65803,
66023..66025))
/locus_tag="Caur_0055"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173623"
misc_feature complement(order(65555..65566,65615..65635))
/locus_tag="Caur_0055"
/note="activation loop (A-loop); other site"
/db_xref="CDD:173623"
gene 66229..66888
/locus_tag="Caur_0056"
/db_xref="GeneID:5828193"
CDS 66229..66888
/locus_tag="Caur_0056"
/note="PFAM: Forkhead-associated protein; transcriptional
regulator domain protein;
KEGG: rca:Rcas_1480 putative two component transcriptional
regulator, winged helix family"
/codon_start=1
/transl_table=11
/product="transcriptional regulator domain-containing
protein"
/protein_id="YP_001633699.1"
/db_xref="GI:163845655"
/db_xref="InterPro:IPR000253"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:5828193"
/translation="MQSAPAPQLIVKRSNGDYREIVWDQPVITVGRDGANDIIIDHPL
ASRRHARFERTDEGFFIRDLDSTNGTFLNQERLIGTRSLHHSDQIMIADTVIIFNDPA
ATMKGTLDPTLLRAVRAEIRVDEPTKSVYIRGELLSPPLTVKEFQLLALLYRRQGEVV
SKEEIANQVWDYAIFDYNAIDALVYRLRQRIEPDPSKPRYLITQRGFGYKLIVAPELE
S"
misc_feature <66238..66516
/locus_tag="Caur_0056"
/note="FOG: FHA domain [Signal transduction mechanisms];
Region: COG1716"
/db_xref="CDD:31902"
misc_feature 66247..66522
/locus_tag="Caur_0056"
/note="Forkhead associated domain (FHA); found in
eukaryotic and prokaryotic proteins. Putative nuclear
signalling domain. FHA domains may bind phosphothreonine,
phosphoserine and sometimes phosphotyrosine. In
eukaryotes, many FHA domain-containing proteins...;
Region: FHA; cd00060"
/db_xref="CDD:28942"
misc_feature order(66322..66324,66358..66360,66364..66369,66427..66435)
/locus_tag="Caur_0056"
/note="phosphopeptide binding site; other site"
/db_xref="CDD:28942"
misc_feature <66577..66861
/locus_tag="Caur_0056"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature 66586..66861
/locus_tag="Caur_0056"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature order(66652..66654,66709..66714,66763..66765,66772..66774,
66796..66801,66835..66837,66850..66852)
/locus_tag="Caur_0056"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 66922..68229
/locus_tag="Caur_0057"
/db_xref="GeneID:5828194"
CDS 66922..68229
/locus_tag="Caur_0057"
/note="catalyzes the formation of
5-O-(1-carboxyvinyl)-3-phosphoshikimate from
phosphoenolpyruvate and 3-phosphoshikimate in tryptophan
biosynthesis"
/codon_start=1
/transl_table=11
/product="3-phosphoshikimate 1-carboxyvinyltransferase"
/protein_id="YP_001633700.1"
/db_xref="GI:163845656"
/db_xref="InterPro:IPR001986"
/db_xref="InterPro:IPR006264"
/db_xref="GeneID:5828194"
/translation="MKGITLTAPKRLRGVIEVPGDKSISHRSVLFNAIATGSAHITHF
LPGADCLSTVACIRALGVTVEQPAERELIVHGVGLGGLREPADVLDCGNSGTTLRLLA
GLLAGHPFFSVLTGDASLRSRPQRRIVVPLRAMGAQIDGRDDGDRAPLAIRGNRLRGG
HYELSIASAQVKSALLLAALNAEQPLTLTGRIDSRDHTERMLAAMGLEITVTADQITI
QPPSEATAPTALSLRVPGDPSSAAFWWVAAAIHPDAELVTPGVCLNPTRIGAIEVLQA
MGADLTVMNERLEGSEPVGDVVVRSSSLRGTTIAGTLIPRLIDEIPVLAVAAACASGE
TVIRDAQELRAKETDRIATVAAGLSAMGAVVEPTADGMVIVGQPGQLQGTTLNSFHDH
RLAMAWAIAAMVARGETTILEPAAAAVSYPEFWQTLAMVQEAA"
misc_feature 66955..68214
/locus_tag="Caur_0057"
/note="EPSP synthase domain. 3-phosphoshikimate
1-carboxyvinyltransferase
(5-enolpyruvylshikimate-3-phosphate synthase) (EC
2.5.1.19) catalyses the reaction between
shikimate-3-phosphate (S3P) and phosphoenolpyruvate (PEP)
to form...; Region: EPSP_synthase; cd01556"
/db_xref="CDD:30129"
misc_feature 66961..68208
/locus_tag="Caur_0057"
/note="3-phosphoshikimate 1-carboxyvinyltransferase;
Region: aroA; TIGR01356"
/db_xref="CDD:162316"
misc_feature order(66973..66984,67621..67632)
/locus_tag="Caur_0057"
/note="hinge; other site"
/db_xref="CDD:30129"
misc_feature order(66985..66990,67000..67002,67198..67200,67204..67209,
67288..67290,67423..67431,67492..67494,67501..67503,
67876..67878,67945..67947,67957..67962,67969..67971,
68095..68100,68176..68178)
/locus_tag="Caur_0057"
/note="active site"
/db_xref="CDD:30129"
gene 68226..68810
/locus_tag="Caur_0058"
/db_xref="GeneID:5828195"
CDS 68226..68810
/locus_tag="Caur_0058"
/note="KEGG: rca:Rcas_1482 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633701.1"
/db_xref="GI:163845657"
/db_xref="GeneID:5828195"
/translation="MNDGFTFTVEIFTPTLLCTGSYTLPMYRRVSDALNNRLSRFVNL
HDVSIAPLWRPQQAQRVQHALVAWGDALLVAVLAEPEPPPDYHPVAPPRETHPVMFFT
AEFAVRAEMYKRPDMDLEEMLSGLTDDFIPLRNVTIFPINGGAPLHRSFVCLAQRAIQ
VLYSVRGHTPADHHSEPPADTTATVPESNTNAEA"
gene 68831..69814
/locus_tag="Caur_0059"
/db_xref="GeneID:5828196"
CDS 68831..69814
/locus_tag="Caur_0059"
/note="TIGRFAM: UDP-glucose 4-epimerase;
PFAM: NAD-dependent epimerase/dehydratase; short-chain
dehydrogenase/reductase SDR; 3-beta hydroxysteroid
dehydrogenase/isomerase; polysaccharide biosynthesis
protein CapD; dTDP-4-dehydrorhamnose reductase;
KEGG: rca:Rcas_2654 UDP-glucose 4-epimerase"
/codon_start=1
/transl_table=11
/product="UDP-glucose 4-epimerase"
/protein_id="YP_001633702.1"
/db_xref="GI:163845658"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002225"
/db_xref="InterPro:IPR003869"
/db_xref="InterPro:IPR005886"
/db_xref="InterPro:IPR005913"
/db_xref="GeneID:5828196"
/translation="MRILVTGGAGYIGSITSAELIRAGHEVIVIDNLYQGHRAAVPPE
ATFIQADLANRQELSEIFAAYPGIDGIMHFASYTLVGESMEKPMLYLRDNVTNAGNLL
EVAIAAGVRRFILSSTANLFDQPERIPIAEHERIVPGSPYGESKFFIERMLHWMARIY
GMRYACLRYFNACGDTPERGEDHDPETHLIPIVLQVALGQRPHVTIFGDDYPTRDGTC
VRDYIHVLDLASAHILAMEALDRLGERRYNLGNGQGFTVREVIETARKVTGHPIPAVV
GPRRPGDPAVLVASSETIRAELGWQPRFPDLESIIASAWEWHRTHPHGYDD"
misc_feature 68831..69805
/locus_tag="Caur_0059"
/note="UDP-glucose 4-epimerase [Cell envelope biogenesis,
outer membrane]; Region: GalE; COG1087"
/db_xref="CDD:31284"
misc_feature 68834..69787
/locus_tag="Caur_0059"
/note="UDP-glucose 4 epimerase, subgroup 1, extended (e)
SDRs; Region: UDP_G4E_1_SDR_e; cd05247"
/db_xref="CDD:187558"
misc_feature order(68849..68851,68855..68866,68921..68938,68978..68986,
69050..69058,69062..69064,69107..69109,69176..69184,
69254..69256,69266..69268,69335..69340,69344..69346)
/locus_tag="Caur_0059"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:187558"
misc_feature order(69080..69082,69086..69094,69101..69106,69113..69118,
69125..69130,69134..69139,69146..69148,69251..69253,
69260..69262,69272..69274,69281..69286,69290..69298)
/locus_tag="Caur_0059"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187558"
misc_feature order(69110..69112,69182..69184,69254..69256,69266..69268)
/locus_tag="Caur_0059"
/note="active site"
/db_xref="CDD:187558"
misc_feature order(69182..69190,69254..69256,69335..69343,69389..69397,
69440..69451,69482..69484,69488..69490,69494..69496,
69599..69601,69668..69670,69677..69679)
/locus_tag="Caur_0059"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187558"
gene 69804..71756
/locus_tag="Caur_0060"
/db_xref="GeneID:5828197"
CDS 69804..71756
/locus_tag="Caur_0060"
/note="PFAM: protein kinase;
SMART: tyrosine protein kinase; serine/threonine protein
kinase;
KEGG: rca:Rcas_4117 serine/threonine protein kinase"
/codon_start=1
/transl_table=11
/product="protein kinase"
/protein_id="YP_001633703.1"
/db_xref="GI:163845659"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR001245"
/db_xref="InterPro:IPR002290"
/db_xref="InterPro:IPR008266"
/db_xref="GeneID:5828197"
/translation="MTTNPVSVPSLPRFYGHYEVEQQIGRGESSRVFRAHHRQIKEHK
VALKVLLSQEAARIKRFEQEAQIAARLRHPHISRLLDYGIQNPFHYAVFEYIPGSSLR
DLIKGHDQRLPPDQVMAYFQQIADALDYAHSLDIIHRDLSPGNILIDTENHKAYLIDF
GIARNPDQSLTSTNVTMGTPGFIAPECMHSATNATHLSDIFSLGVILFLMLTGEKPWY
EMPQPGSSLDPFLRIRTLADTGVKLPSEVDRIIRVMLAFEPAHRYTSAGAAAIDFVAV
MQRHLSVTQIQSSEPVKVDQTATRRKHIVLIEPNEVELALSGSLFREPLERALMRARQ
LDETTIKSLIEQWAKRQRFYQPHLGRIAQIQDTKHHNVFFFQLRLLIEQRLDAGTEEE
PDSQQKQIPPQRELERWQVELPPPKDFQKHPGGRVIVPGSERVVTCPSCKGHGVHICA
MCKGSRRVTVTDQAATTTENAADSSSVARQRVVPCPECQGRGSLPCKRCDSFTRVIQR
KLIEWSRWPVEDQAHTDLPDVDEMWLRRTCKAELVYKKRVDRIPKEWLEITEIKEILE
QRRKNLNNDSRIVLAELQIHFIPLTEVTLDLGKQGPGERLAIYGFEHNIPPDWRFLHW
ERIICLSVIALLSIFLMISLAFIING"
misc_feature 69855..70625
/locus_tag="Caur_0060"
/note="Serine/Threonine protein kinases, catalytic domain;
Region: S_TKc; smart00220"
/db_xref="CDD:197582"
misc_feature 69873..70595
/locus_tag="Caur_0060"
/note="Catalytic domain of Protein Kinases; Region: PKc;
cd00180"
/db_xref="CDD:173623"
misc_feature order(69873..69887,69897..69899,69939..69941,69945..69947,
70032..70034,70080..70091,70101..70103,70107..70109,
70221..70223,70227..70229,70233..70238,70242..70244,
70278..70280,70287..70289,70335..70346)
/locus_tag="Caur_0060"
/note="active site"
/db_xref="CDD:173623"
misc_feature order(69873..69887,69897..69899,69939..69941,69945..69947,
70032..70034,70080..70091,70101..70103,70221..70223,
70227..70229,70233..70238,70242..70244,70278..70280)
/locus_tag="Caur_0060"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:173623"
misc_feature order(69885..69887,70101..70103,70107..70109,70221..70223,
70227..70229,70233..70235,70287..70289,70335..70346)
/locus_tag="Caur_0060"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173623"
misc_feature order(70275..70295,70335..70346)
/locus_tag="Caur_0060"
/note="activation loop (A-loop); other site"
/db_xref="CDD:173623"
misc_feature 71115..71303
/locus_tag="Caur_0060"
/note="DnaJ central domain; Region: DnaJ_CXXCXGXG;
pfam00684"
/db_xref="CDD:201392"
misc_feature 71115..71300
/locus_tag="Caur_0060"
/note="Zinc finger domain of DnaJ and HSP40; Region:
DnaJ_zf; cd10719"
/db_xref="CDD:199908"
misc_feature order(71115..71117,71124..71126,71148..71150,71157..71159,
71256..71258,71265..71267,71289..71291,71298..71300)
/locus_tag="Caur_0060"
/note="Zn binding sites [ion binding]; other site"
/db_xref="CDD:199908"
gene 72070..73017
/locus_tag="Caur_0061"
/db_xref="GeneID:5828198"
CDS 72070..73017
/locus_tag="Caur_0061"
/note="PFAM: ATPase associated with various cellular
activities AAA_3; ATPase associated with various cellular
activities AAA_5;
SMART: AAA ATPase;
KEGG: rrs:RoseRS_1835 ATPase associated with various
cellular activities, AAA_3"
/codon_start=1
/transl_table=11
/product="ATPase"
/protein_id="YP_001633704.1"
/db_xref="GI:163845660"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011703"
/db_xref="InterPro:IPR011704"
/db_xref="GeneID:5828198"
/translation="MQTAQLASALLNEARKTLVGQEENLTLLLTALLSGGHVLLEGPP
GTAKTLMAKTLAQMIQADFRRIQFTPDLMPADVIGIQVFDMKSGEFRLYRGPIFTQIL
LGDEINRAPAKTQSALLEAMEERQVTIEGQRLPLPEPFFVIATQNPIEYDGTYPLPEA
QLDRFLFKIVIGYASRDVETEVLRRYHLGFDAHQLTASGLRPIVSPEALATCRAEITQ
VQVEQGILDYIVSIIQATRNSPELLVGASLRAGVAMLLAAKTLAAIHDRNYVTPDDVK
LLARPVLRHRIILRPEAEIEGLNPDMAINRILNRIEVPR"
misc_feature 72070..73014
/locus_tag="Caur_0061"
/note="MoxR-like ATPases [General function prediction
only]; Region: COG0714"
/db_xref="CDD:31058"
misc_feature 72193..72588
/locus_tag="Caur_0061"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 72193..72216
/locus_tag="Caur_0061"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(72196..72219,72382..72384,72508..72510)
/locus_tag="Caur_0061"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 72370..72387
/locus_tag="Caur_0061"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 72559..72561
/locus_tag="Caur_0061"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene 73019..75568
/locus_tag="Caur_0062"
/db_xref="GeneID:5828199"
CDS 73019..75568
/locus_tag="Caur_0062"
/note="PFAM: protein of unknown function DUF214;
KEGG: rca:Rcas_1858 protein of unknown function DUF214"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633705.1"
/db_xref="GI:163845661"
/db_xref="InterPro:IPR003838"
/db_xref="GeneID:5828199"
/translation="MLSRMLVRSSLRWIRQHPWQMLLCIIGVALGVAVVVAIDLANAS
ARRAFQLAGDTVAGQATHQIVGGPTGLPETVYPTIRRQFPTLAAAPVVEGYLTAPALG
PGVYQLFGVDPFAEAPFRPYLAGNGAVDLAALLVEPGAALLARTTSEQAGLQPGDQLP
VQIGARQTALRIVGVLDPADDLSRRSLAGLVIVDISSAQELLDNTGRLSRIDLIVPEA
FDLAALTAQLPAGVTVQPVAARAGTLQQMTAAFELNLTALSLLALIVGMFLIYNTMTF
SVVQRRGLWGTLRCVGVSRGQLAGMVLIEAFIISLVGVAAGLVLGVVLGRGLVGLVTQ
TINDLYFVVTVRDLAIEPLVLIKGTALGIIATLLAALAPTLEAMYTPPRTVLRRSSLE
ERIRRAIPRLAGGGVGLLLLGGGLLLIPATADTSSLYIAFGGLFAIVIGTALLTPLIL
MTLMAVLRPILGRAAGMLGNMAARDVVNSLSRTAVAVAALMVAVSVTIGVGIMIGSFR
QTVINWLEQSLIADIYLSPPSNVANRIDTTIDPALPAALASLPEVEAITTFRSVQIDL
PTGPTTLVAVGSTTDRGRRALRFQQGGDEATWTAWENGAVLISEPLAFRSGLGVGDTL
TVRTDRGLRELPIAGVYYDYTSDRGVVRINEATYRQLWDDTALSSLAIYVREGYEVDA
VMERVRAISAAYGTIIVNSSRALREGTLIVFDRTFAITSVLQLLATIVAFIGILSALM
ALQLERTRELGVLRAIGLTPGQLWGVVLGQTSLMGLAAGLLAAPLGLALAVVLTYVIN
KRSFGWTLEFTLDPTLFVQALAVAIVAALLAGIWPALQMSRTSPAVALRDE"
sig_peptide 73019..73132
/locus_tag="Caur_0062"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.967) with cleavage site probability 0.762 at
residue 38"
misc_feature <73190..73702
/locus_tag="Caur_0062"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:205030"
misc_feature 73808..>73948
/locus_tag="Caur_0062"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
misc_feature 74510..75565
/locus_tag="Caur_0062"
/note="ABC-type transport system, involved in lipoprotein
release, permease component [Cell envelope biogenesis,
outer membrane]; Region: LolE; COG4591"
/db_xref="CDD:34229"
misc_feature 75179..75544
/locus_tag="Caur_0062"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
gene 75650..75916
/locus_tag="Caur_0063"
/db_xref="GeneID:5828200"
CDS 75650..75916
/locus_tag="Caur_0063"
/note="PFAM: acyl-coA-binding protein ACBP;
KEGG: rrs:RoseRS_0103 acyl-coA-binding protein, ACBP"
/codon_start=1
/transl_table=11
/product="acyl-CoA-binding protein"
/protein_id="YP_001633706.1"
/db_xref="GI:163845662"
/db_xref="InterPro:IPR000582"
/db_xref="GeneID:5828200"
/translation="MSDLQAAFERAAQEVQQLPRRPDNETLLQLYALYKQATVGDVQG
SRPGVLDMTGRLKYDAWAKLKGVTAADAMQRYIELVERLKQSLA"
misc_feature 75659..75913
/locus_tag="Caur_0063"
/note="Acyl CoA binding protein (ACBP) binds thiol esters
of long fatty acids and coenzyme A in a one-to-one binding
mode with high specificity and affinity. Acyl-CoAs are
important intermediates in fatty lipid synthesis and fatty
acid degradation and play a...; Region: ACBP; cd00435"
/db_xref="CDD:29555"
misc_feature order(75683..75685,75692..75697,75701..75703,75710..75715,
75719..75721,75728..75733,75737..75742,75749..75754,
75803..75808,75815..75820,75875..75877)
/locus_tag="Caur_0063"
/note="acyl-CoA binding pocket [chemical binding]; other
site"
/db_xref="CDD:29555"
misc_feature order(75695..75697,75740..75742,75749..75754,75818..75820,
75875..75877)
/locus_tag="Caur_0063"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:29555"
gene complement(76425..76709)
/locus_tag="Caur_0064"
/db_xref="GeneID:5828201"
CDS complement(76425..76709)
/locus_tag="Caur_0064"
/note="PFAM: RNP-1 like RNA-binding protein;
KEGG: mca:MCA1010 RNA-binding protein"
/codon_start=1
/transl_table=11
/product="RNP-1 like RNA-binding protein"
/protein_id="YP_001633707.1"
/db_xref="GI:163845663"
/db_xref="InterPro:IPR000504"
/db_xref="GeneID:5828201"
/translation="MLVKLFVGNLPWNVGDAELGSIFEPHGEVQSARVINDRDTGRSR
GFGFVEIETNNVAAVIRATDGLEVGGRNLRVNEAEDKPRNAPRGGFGRRY"
misc_feature complement(76482..76700)
/locus_tag="Caur_0064"
/note="RRM (RNA recognition motif), also known as RBD (RNA
binding domain) or RNP (ribonucleoprotein domain), is a
highly abundant domain in eukaryotes found in proteins
involved in post-transcriptional gene expression processes
including mRNA and rRNA...; Region: RRM; cd00590"
/db_xref="CDD:100104"
misc_feature complement(order(76566..76568,76572..76574,76692..76694))
/locus_tag="Caur_0064"
/note="RNA/DNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:100104"
misc_feature complement(76482..76487)
/locus_tag="Caur_0064"
/note="RRM dimerization site [polypeptide binding]; other
site"
/db_xref="CDD:100104"
gene 77165..77749
/locus_tag="Caur_0065"
/db_xref="GeneID:5828202"
CDS 77165..77749
/locus_tag="Caur_0065"
/note="PFAM: alkyl hydroperoxide reductase/ Thiol specific
antioxidant/ Mal allergen; Redoxin domain protein;
Contains selenocysteine;
KEGG: gvi:glr0029 hypothetical protein"
/codon_start=1
/transl_except=(pos:77405..77407,aa:Sec)
/transl_table=11
/product="alkyl hydroperoxide reductase"
/protein_id="YP_001633708.1"
/db_xref="GI:163845664"
/db_xref="InterPro:IPR000866"
/db_xref="InterPro:IPR013740"
/db_xref="GeneID:5828202"
/translation="MSRPFIPMTAKWRQEFIKPRGPANVPAVGSEAPDFTLPYAQFLS
GPPEDRVEYGRTITLSALRGRPVVLNLTRIVSDRFFUPHCAPQLDALREHYDLFVQRN
AHLLVVSSTDLEMTSYVAEVLRAPYPILSDPEWGVFYRYGMGSAMGVPLPGVFVIDAD
GIIRWSWAAPLSVVFTPPRPAELAAVLDALASEG"
misc_feature 77246..77734
/locus_tag="Caur_0065"
/note="Peroxiredoxin [Posttranslational modification,
protein turnover, chaperones]; Region: AhpC; COG0450"
/db_xref="CDD:30799"
misc_feature 77255..77665
/locus_tag="Caur_0065"
/note="Peroxiredoxin (PRX) family, Bacterioferritin
comigratory protein (BCP) subfamily; composed of
thioredoxin-dependent thiol peroxidases, widely expressed
in pathogenic bacteria, that protect cells against
toxicity from reactive oxygen species by reducing...;
Region: PRX_BCP; cd03017"
/db_xref="CDD:48566"
gene complement(77807..78511)
/locus_tag="Caur_0066"
/db_xref="GeneID:5828203"
CDS complement(77807..78511)
/locus_tag="Caur_0066"
/note="KEGG: rca:Rcas_1013 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633709.1"
/db_xref="GI:163845665"
/db_xref="GeneID:5828203"
/translation="MWLIAEYEAVSLFSLRPSFTTASGGKTLLAPTPFAIKMAIFDAL
CRAQSLDVARSHWPAIARLEVALRPAAQAVVSNVFQRVLRPSRSEAKPNDPDFEGFFQ
RTIGYREYVHLFGDFAIGLGWEGSDQRDWLRDALLHITYLGKRGGFVQVLSVPAYNEV
LPAEFVSLTRPETNFPLDGTMQVVDDCAPNLSFEKIDVYNPAKKLSKGDRTERHVVLP
YRLKRSSKSFSWYERV"
gene complement(78514..79503)
/locus_tag="Caur_0067"
/db_xref="GeneID:5828204"
CDS complement(78514..79503)
/locus_tag="Caur_0067"
/note="TIGRFAM: CRISPR-associated autoregulator DevR
family;
PFAM: CRISPR-associated regulatory Csa2 family protein;
KEGG: rca:Rcas_1012 CRISPR-associated autoregulator, DevR
family"
/codon_start=1
/transl_table=11
/product="CRISPR-associated autoregulator DevR family
protein"
/protein_id="YP_001633710.1"
/db_xref="GI:163845666"
/db_xref="InterPro:IPR002764"
/db_xref="InterPro:IPR010154"
/db_xref="GeneID:5828204"
/translation="MKPVFSLSIAARAVLNLHSLNNEGGEGNQIQTRMVNVFADGRLH
SVNAISGDMFKHIQSEHLHRLAVQADLPLSMGARLFNANRINYDLDLDKEFLNQLQTA
KSNAGELDLILQRCAVTDMAGALITAGNRSLPRKSVVEFGWVVGVPGSVKTDSYFHVK
FESERGGGSAGVDESGSIAGKQTPFHRPASSGVYAIVVQVEAARIGFNDISQRYAVDA
DQRRKRLRALLESILYTFIEPAGAMRTAQNPHILDVSGVMTVSSNVIPAPCISPLKDD
FVSDVQRVAESLNQLHPDAIELFSFDSLGAFAEQMSRLIQEAEPFTLPAVNGA"
misc_feature complement(78661..79476)
/locus_tag="Caur_0067"
/note="CRISPR-associated negative auto-regulator
DevR/Csa2; Region: DevR; pfam01905"
/db_xref="CDD:202038"
gene complement(79534..81093)
/locus_tag="Caur_0068"
/db_xref="GeneID:5828205"
CDS complement(79534..81093)
/locus_tag="Caur_0068"
/note="KEGG: rca:Rcas_1011 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633711.1"
/db_xref="GI:163845667"
/db_xref="InterPro:IPR000529"
/db_xref="GeneID:5828205"
/translation="MVGVVEDYEQAKADNETYWTWRKSVGGQQPQLHPPVEPHPDWEL
FRAINPTALQAANSAAAEWFQGRVAFPALLETVLIYASTLPNDQEGAEKHWAAVCKQH
GLHHTKQLSASQVINPTQGKGTANGKAIFAKPGNLSNFWLTEYLKWVGLRWAGFTRLI
RDSKDRKIYVLAPNQLDWHDHRGIREEFRRLMVGSGGAIQLDVLAALRYTRAVLDYAA
VTQSERLLTQIFGSHQGVNRLVYGLDSAYYKNLGQSAAVMNIARIGLPAWVQPRVRQD
IQLYQNMIDEHIRIVRNLDEKRGEDYELLRLYRDFLSTNELTALLAFTDAYSGFVIQR
DKLAPQFTVHHLEVIMSSIAPPLSKITQSRGFRNLAYAIRMATVEAHRRNLKRNQGRY
DVSYEVRYGLGQELLRKSAYPNEFITALSEFIHDYNAENARMRERLERQGYSQPRGAR
SDVSIKDIDELLALMDEYRDPQMIASLLVAYGYASTFQRDETYTPDSDAEEVTEPVSS
DGDDDNSPEAE"
gene complement(81155..81394)
/locus_tag="Caur_0069"
/db_xref="GeneID:5828206"
CDS complement(81155..81394)
/locus_tag="Caur_0069"
/note="KEGG: rca:Rcas_1011 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633712.1"
/db_xref="GI:163845668"
/db_xref="GeneID:5828206"
/translation="MNASIYRSKYYVEKRTGTFADNLVAFGLAYVLDGIADSRARVTI
ADHGSHFAVICDPPLREDWVKNCQFFYRRFSFSHC"
gene complement(81409..83814)
/locus_tag="Caur_0070"
/db_xref="GeneID:5828207"
CDS complement(81409..83814)
/locus_tag="Caur_0070"
/note="KEGG: rca:Rcas_1010 CRISPR-associated helicase
Cas3;
TIGRFAM: CRISPR-associated helicase Cas3;
PFAM: helicase domain protein; DEAD/DEAH box helicase
domain protein;
SMART: DEAD-like helicases"
/codon_start=1
/transl_table=11
/product="CRISPR-associated helicase Cas3"
/protein_id="YP_001633713.1"
/db_xref="GI:163845669"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR006474"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:5828207"
/translation="MQLYPYQQRVKDIILAGENVVLQAPTGAGKTRAALVPFIEGFFD
RPDTTPRKCLYVTPMRVLANQFYAEYRELAARYQRLHGRQLDVRIQTGEQPEDRRFEG
DLIFCTVDQFLSSYLMMPYSLPYRLANVNAGALAGAYLVFDEFHLFDPDAALPTILHV
LRQLHGLAPFMLMTATFSSAMLQSLATLLQPAQVVTLSAAEIAAINTRGGQPARQRVW
QVADQPLQAAAVLAHHQHASLVICNTVRRAREVYAELKQQAPPETEVLLLHSQFLPDD
RRQIEAKLRSRLGVSSQRQQANLIVVATQVVEVGVDISVEVLHTELAPPASLIQRAGR
CARYPGDTGTVIVYPVETYVPYAFKPDEILKHEMDATLAWLKERQGAVFDFDHEQELV
NAVSAARDQNIIAGIQADRHNRRASIQGCLEGQRAGASRLLVRDVDSRLVLIHPDPDQ
LLASPYDAVGLNIPLYSLRSMGKDWLQRPTDAPWRVRRLDESDAGDQAESNRPLYRWV
DVHDSKELAQSAIIVVHPALAGYSAHEGFSPETGNLPFISTLPPARPLIDRPRSSLYV
ETYAEHIQRVLDAFQELVLPELRFAASALECAAGWSPGSVLRAAWLACLFHDVGKLSK
GWQQWAHAYQQAIGQPVAKTIALAHTTFDFQNPTHRQAEREVSRSTPRPRHAAEGALA
VAQILAGAFNISHEKELVQAILTAIARHHAPFVQDCQAFSLVSEAGNLIQNTLQFLPE
EVNYSLNINDLWVNSHHHQQFAELLIKPTSRYGWIAYTLLARALRRADQRGTEMGAGQ
TLP"
misc_feature complement(82684..83757)
/locus_tag="Caur_0070"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(82684..83757)
/locus_tag="Caur_0070"
/note="CRISPR-associated helicase Cas3; Region: cas3_core;
TIGR01587"
/db_xref="CDD:162437"
misc_feature complement(<81562..82065)
/locus_tag="Caur_0070"
/note="CRISPR/Cas system-associated protein Cas3'';
Region: Cas3''_I; cd09641"
/db_xref="CDD:193608"
gene complement(83818..84846)
/locus_tag="Caur_0071"
/db_xref="GeneID:5828208"
CDS complement(83818..84846)
/locus_tag="Caur_0071"
/note="KEGG: rca:Rcas_1009 regulatory protein, DeoR"
/codon_start=1
/transl_table=11
/product="regulatory protein, DeoR"
/protein_id="YP_001633714.1"
/db_xref="GI:163845670"
/db_xref="GeneID:5828208"
/translation="MGKGRGLSRAERLSEMKRLYVQRAFSDAEIAERLEIDRTTAYRD
RIALEQEYPFVEESPGRYRIDRSRLVSEVRLNPHEALFLYLPARRLLRQTRFANVHVV
QAVEKLAACLQQPMTERLLQLSTSVLKQQKQPQRLSILEQITMAWLNQRKVRITYRAL
RARRPLIHTICPYLIEPALWSDSVYVVAYSDIARDIVPFKLERIEDAVTTLETFDIPD
DFDEQQLLRHTWGIWLGDEEPVTVRLRFMPGEVTRRVQETIWHPSQQITLLDDGGCEW
QAQVTDWREMLPWVRGWGAGVEVLEPLEFRETLMGEARALAERYGWHVSSVPTPTGST
TLHDFFGG"
misc_feature complement(83884..84825)
/locus_tag="Caur_0071"
/note="Predicted transcriptional regulator
[Transcription]; Region: COG2378"
/db_xref="CDD:32525"
misc_feature complement(83896..84432)
/locus_tag="Caur_0071"
/note="WYL domain; Region: WYL; pfam13280"
/db_xref="CDD:205460"
gene 85231..86709
/locus_tag="Caur_0072"
/db_xref="GeneID:5828209"
CDS 85231..86709
/locus_tag="Caur_0072"
/note="TIGRFAM: RNA polymerase sigma factor, sigma-70
family"
/codon_start=1
/transl_table=11
/product="sigma-70 family RNA polymerase sigma factor"
/protein_id="YP_001633715.1"
/db_xref="GI:163845671"
/db_xref="InterPro:IPR014284"
/db_xref="GeneID:5828209"
/translation="MTTSHLPLDHLVRCCKQERQSYRDSGELASPCCMHLFRRAFAGE
QEAWGYVIDIFQPLIDSWLRRVRGTRLDFIDDDDLTAVAHDALLKLRDSANRLPELTT
GDDLSRLLAYLKRCAIREVQTLFRRRNRSREISYIKDDTPHVAHFLDAETRITLYQRL
REVLNEDELFVIEHLFFKGYKPQDIIHYFSERFVDVDHIYQIRQNALRRLRNDPVIRD
LVFPQEQSSDHRDPPIDSPQDRRQKPRGPDSLKIELDQEQKEPGLMGTPCTLDEQILL
DYAAGRLSVEQRLLVEANPDCVAQAQRLAAEIAAIEASLYRLQCPDVDTLHAYYYREL
EATQHLIVHRHVEDCLFCREELALLQVMDETPLIEPSPFERVRQVVEAILQPALALQL
RGQALIYAAPEVLLTLTVRRTKQGVPQWTVIGELKMPDGAPTDQPIEQVVATVTDSHT
ITAEIDEDGVFVIRDLPPGTYRLTVYTPDKEIVIRSLQIGND"
misc_feature 85366..85866
/locus_tag="Caur_0072"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:211770"
misc_feature 86491..>86664
/locus_tag="Caur_0072"
/note="Middle domain of rhamnogalacturonan lyase, a family
4 polysaccharide lyase; Region: RGL4_M; cd10316"
/db_xref="CDD:199904"
gene 86711..89500
/locus_tag="Caur_0073"
/db_xref="GeneID:5828210"
CDS 86711..89500
/locus_tag="Caur_0073"
/note="PFAM: TPR repeat-containing protein;
Tetratricopeptide TPR_4;
SMART: Tetratricopeptide domain protein;
KEGG: sus:Acid_3454 tetratricopeptide TPR_4"
/codon_start=1
/transl_table=11
/product="tetratricopeptide-repeat containing protein"
/protein_id="YP_001633716.1"
/db_xref="GI:163845672"
/db_xref="InterPro:IPR001440"
/db_xref="InterPro:IPR011717"
/db_xref="InterPro:IPR013026"
/db_xref="GeneID:5828210"
/translation="MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIK
SDSARADRISRAAIAVAEQLPTEPIARALAYWARGNWAVYRRPEEAVDLYQKALVVYE
QIGDSEAIARLSSNLILACTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYG
LLLYECGRYQEALDVNEKMIALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLID
SRQRLEQLTPKPVLTIARIDLNLGDYYSATANLSAALNHFRDASKGFQEENVAMDYAT
VLLYEANLLKRLGALREARRAYDRAYQAFREDNLTQYAAQALLAGAAVRREINPADPE
LPEMLNRACDMFTNLQLPIWRNETLLEQARLALLFGNYAQAESLLTTAWSEDADTVLH
LAIDHQLLWGRLRMAQGDEAGALTAFTSALTQSQNGAQIWSEREALVALGNLLAARQP
DSAIQYLQDAVRIDELMRAELSVAELTADFQSRRNDALPLLAKLEWQAGHFQTALQTV
WRWKGGALIDLIRRHDGYTDVNPTIAQLQQRIAVLRWELERKQRDEESEERLDELRRQ
IRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLSKLDADCLIEYVSIDNELYAWCLTR
NGDCTITTLGSTSTISELLQRLELKNLNALRLNDEQRQQRGETLIRDARVLLQRLYRT
LIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLMERYLIEQIPTGALLGIPVPAG
PSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDPAALTALHNLTTAPRILHF
SAHTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLNGCTTAYGMESGGALIA
FQSAFLIAGAQRLLVSLWPIKDEPAAGLMARFYQNLMQTQSPAVALRQTQRDLLHDPA
LAHPAIWSAFAVMRR"
misc_feature 86924..87139
/locus_tag="Caur_0073"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature 88727..89497
/locus_tag="Caur_0073"
/note="CHAT domain; Region: CHAT; pfam12770"
/db_xref="CDD:205066"
gene 89548..91068
/locus_tag="Caur_0074"
/db_xref="GeneID:5828211"
CDS 89548..91068
/locus_tag="Caur_0074"
/note="PFAM: polysaccharide biosynthesis protein;
virulence factor MVIN family protein;
KEGG: gvi:gll3709 polysaccharide transporter, PST family"
/codon_start=1
/transl_table=11
/product="polysaccharide biosynthesis protein"
/protein_id="YP_001633717.1"
/db_xref="GI:163845673"
/db_xref="InterPro:IPR002797"
/db_xref="InterPro:IPR004268"
/db_xref="GeneID:5828211"
/translation="MPTPHSPHPHPNPPPALLATRAVRGSLWVVASSYWTIGFGFLAN
MLLMRLLSPDVYGEFALAMFFFSLFQVRSKIALNYAFAQQRAITGETVGTLFVLDVLA
GWGGVLLAFSVAPLLRWLGYPAAVIEIMLVLTILSGIESLLGVFQIVLESDLHFKPIS
IINGIAMPLSYIPAFVCAFTDLKRYSILAQSTSFTLLSLIGIGLYALYTQRHLLRLRW
RYQSTLAVAYLRFGMTSGLGQAIAGLTTQVDNMILGTIAGTVHLGYYDRAYRVAQWPA
LLLSAVLGRAAIFTYSQLRDDVIRLQRAVTRVLWGSLHLAVPVALAVMLSANELVPLL
FGAQWEPAIPLLRVLILLAVIRPVWDNLSAWFIGSGEPQRVVALSAIQLLLLVLIGTP
LTLMGGEFGMAIGAVIAAGCSLLIAYWQVRRQLVVDLRQVLGNPLLAALGTLLIFWLL
DRLVGSGQPLWLAVGWKAGVAFGGFFCWAYVLQPALFRRQIGEVWRAIRGKGERDA"
misc_feature 89614..90399
/locus_tag="Caur_0074"
/note="MatE; Region: MatE; cl10513"
/db_xref="CDD:209159"
gene 91216..92115
/locus_tag="Caur_0075"
/db_xref="GeneID:5828212"
CDS 91216..92115
/locus_tag="Caur_0075"
/note="PFAM: D12 class N6 adenine-specific DNA
methyltransferase;
KEGG: rrs:RoseRS_0743 D12 class N6 adenine-specific DNA
methyltransferase"
/codon_start=1
/transl_table=11
/product="D12 class N6 adenine-specific DNA
methyltransferase"
/protein_id="YP_001633718.1"
/db_xref="GI:163845674"
/db_xref="InterPro:IPR002294"
/db_xref="InterPro:IPR012327"
/db_xref="GeneID:5828212"
/translation="MKHQRTPSPILQRRTRRLIAFGWYGGKYSHLDWLLPLLPPCHHY
CEPFGGSAAVLLNRDPAPVETYNDIDGEVTNFFRVLRDQPDQLTRAIALTPFSREEFA
LACEIDPSLEPIERARRFYVRARQVRTGLAQSASLGRWANCKQTSRSGMAGAISRWFG
AIEDLPDIAIRLLRVQIENRPALEVIRLYDSPDTLFYCDPPYVHETRGDNNAYAYEMS
NEEHQQLADVLNSVQGFVAISGYDCDLMNELYSPPKWIKHVGPTRTIHSTKDQRTEIL
WTNYDPILYQSHTLFGVELGKSS"
misc_feature 91276..92061
/locus_tag="Caur_0075"
/note="Site-specific DNA methylase [DNA replication,
recombination, and repair]; Region: Dam; COG0338"
/db_xref="CDD:30686"
gene 92099..93226
/locus_tag="Caur_0076"
/db_xref="GeneID:5828213"
CDS 92099..93226
/locus_tag="Caur_0076"
/note="KEGG: rrs:RoseRS_0742 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633719.1"
/db_xref="GI:163845675"
/db_xref="GeneID:5828213"
/translation="MENPHEILKRILEYVSVDLSRSSITDQEIRTRIESVCRQISNRA
CTRMLMACLLAKIHRPEIDPRKPYTEIGGEDSFSGRTYDEKYITHFINTYQLPLNPTT
AFLTPAFRNLDKPLTTDLELVGRPRRTYKDTLQLLDDVYRGRVSAEDMLAEIIRILVV
IREENRNRIRTLLAGLASTEDPLPLSSEDIVSLIEQHLKCKNSSRLPVLIIAAAYLSV
SEKIGEYIQPLQKHNAADEQTGSFGDVEVCLANDDRVVTVYEMKMKQVTIDDIDRARE
KVARARDKIHNYIFITTDVITDDVKFYAAKCYEETNDTEITVLDCIGFLRHFLHLFHR
SRIQFLNHYQQLLLNEPDSAVNQPLKEAFLTLRRAAEIDKG"
gene 93459..94595
/locus_tag="Caur_0077"
/db_xref="GeneID:5828214"
CDS 93459..94595
/locus_tag="Caur_0077"
/note="PFAM: glycosyl transferase group 1;
KEGG: rrs:RoseRS_3120 glycosyl transferase, group 1"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_001633720.1"
/db_xref="GI:163845676"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:5828214"
/translation="MKILFIARYHHPTTQRKVEYLAQAPDIDLCHIVPAYQPQSADLR
PLDEQRRYRQLTIPMLGSVSDPHRALYRTVTFHLHRFRPDIIHAEEEPDSLSALQIVW
ARRIWAPQARLLLHTWQNQDRRKSRAVRWVIRQTLEAADLVFCANSEAITLLRRFGFT
GPAPLLPAIGVDTTLFRPCAAYNGLSEQSAAKSSYTIGYIGRLVWEKGIDLLLQAVAA
LTSAMPDRQIQVWVTGAGPLQAELQSLARQLGIEERVVWKGAQPPHEIAKILCHLDVL
VLPSRTTNVWKEQLGRVLLEAMACGVPVIGSTSGAIPEVIGDAGLIVPEGDVQALTQA
LKHLLSTPDLRQTLAQRGRIRAETYYTQRHLAEQTLAIYREIVA"
misc_feature 93459..94592
/locus_tag="Caur_0077"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature 93462..94580
/locus_tag="Caur_0077"
/note="This family is most closely related to the GT1
family of glycosyltransferases and named after YqgM in
Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to...; Region:
GT1_YqgM_like; cd03801"
/db_xref="CDD:99974"
gene 96498..96884
/locus_tag="Caur_0078"
/db_xref="GeneID:5828215"
CDS 96498..96884
/locus_tag="Caur_0078"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633721.1"
/db_xref="GI:163845677"
/db_xref="GeneID:5828215"
/translation="MTSQPPQTAQKNPVEMLQDQVTLLAHIHQTQQEQLRFLATDIYR
TQQEQLQVLRSLSEQLASLQVEVSQFAQSVHRVQVEDFDMPFTSMVPFLLKRSFALGI
VSIILGVIGLCIFFALITFAGPYFRF"
gene 96990..97862
/locus_tag="Caur_0079"
/db_xref="GeneID:5828014"
CDS 96990..97862
/locus_tag="Caur_0079"
/note="PFAM: glycosyl transferase family 2;
KEGG: rca:Rcas_0463 glycosyl transferase family 2"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_001633722.1"
/db_xref="GI:163845678"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:5828014"
/translation="MHHSDMRQNTSLLPPASVIVLTHNTCELTITCLKQFYQQALDHG
WQVIVVDNGSTDGTYQRLTGLFPSVEVMRSEQNRGFAAGNNLGLRRAMGQAVILLNSD
VLASFATLSRLPEFLAHYPQVGVVSPQLQTASGLPQAFAYGCDPTLPYLLQRGLCWLI
WRKPLHDWGVAAPIEVDWVSGACMCVRRAAIEQVGLLDEGFFLYFEDNDWCLRMRNAG
WKVMYVPTYAVTHLGGQSWPTPRQAGQHYRQSLRYFYQKHYGPLATGLLGVGLLGYQV
LLKLMAFRLRKEED"
misc_feature 97038..97763
/locus_tag="Caur_0079"
/note="Predicted glycosyltransferases [General function
prediction only]; Region: COG1216"
/db_xref="CDD:31409"
misc_feature 97041..97688
/locus_tag="Caur_0079"
/note="Subfamily of Glycosyltransferase Family GT2 of
unknown function; Region: GT_2_like_c; cd04186"
/db_xref="CDD:133029"
misc_feature order(97143..97145,97290..97295)
/locus_tag="Caur_0079"
/note="Probable Catalytic site; other site"
/db_xref="CDD:133029"
misc_feature order(97293..97295,97608..97610,97614..97616)
/locus_tag="Caur_0079"
/note="metal-binding site"
/db_xref="CDD:133029"
gene complement(98452..103038)
/locus_tag="Caur_0080"
/db_xref="GeneID:5828015"
CDS complement(98452..103038)
/locus_tag="Caur_0080"
/note="TIGRFAM: conserved repeat domain protein;
KEGG: sat:SYN_01127 RTX family of calcium-binding
proteins"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633723.1"
/db_xref="GI:163845679"
/db_xref="InterPro:IPR001434"
/db_xref="InterPro:IPR006626"
/db_xref="GeneID:5828015"
/translation="MRFRINVWAILGTTVLVSGFLLASRSVWSATIPVLPPPHTQAVI
SVCDPITTDTTWTTGNVYVVGDCALVVQSGATLTIQPGVIVKFFWVSAYGGSRGGGIR
VDGRLIAQGTADQPIVFTSLADDSAGGDTNGNGPSSGAPGDWHGLILNTGSQTTLDHV
SIRYAGGNLINSSLDGWSEAQIEVKAGAQFSLTNSEVRDGGRIGIYLNGAGLSPTIQH
VQLSGHTATGSSYGYTVLQSTINMQPTYSNLTFSNNTRNEVTIGSFEGEITQNATLGG
TNFGATCGSTLCQLIIPNGRTLTIRPGTRLALGPAFGITIASGGTLNAEGTATQPVIF
TSAAAATTPPGGTVPSNSEWLGLWAQAGSTLRLAYCDISYATDSNYGNGGLEINTDDA
QVQNCKIHHNKRTGLYLASKNNSTIRPVLSNVEVSDNGQYGVYLEAQRGTVLAPTWEG
GAIRRNGWSGIFGYTYEGILEPTLRNLTIAGNGASGGLDREKHGIYFNNHNINPVLEG
VSFNNNTGAAVLWYCNGSITARNLTATGNTQNELVLPGCDISGGRRWDLGDAGIPVRV
AGDINVTPNALLSILSGTILRFDKNQYNSPTWLEVQDQATLNASGTVTRPVVFTGATQ
TPGWWIGIQARQRATLMLRHCEIGYGGAQTTGSLLIRWGYPRTGIPVANIQNCEIHHS
STRGVHFYFDNEPPASPPVFRYNHLHDNAELAVAAWGTPPIDARYNYWGHATGPYHAT
QNPTGQGNGVGDNILFYPWLSAPSSGEVAGEMIVRTGAPTRVSPGETVDYAIQYYNGM
SITVENAVLLIQLPRAAEYVDSTGGGIYWSDRHQVFWKLGDLLPQAEAFVSVRVRFQW
GLPADYKDGSITLLAADNYNAGAFNTAEYLAHQMEEVITGKTIVSQTEFDALRRTVPD
LQTLYEEAIAQGYRYLEAGRITYDDGTSVTGAVFRTPDRRAVRLLTLYEGMALAMTSA
DGLYTLHDTTGGITMTLNGLSRSYWGDWMPGADSQTVGLRASTGCSVSDCNFNCIGQQ
VNFKVMADSLTKMFMWTIATGGSGGTVALALEVLDVTKMIYDCYTECEADPNSNCCTT
TGQVRWTVPGWSKLLGDACVKEECNGTTGTYGTPGVIYCAGGQRCVAGYGNEGGCKSC
VEATASYSAVSLASPGICAAGETSRCSELELLRAKDPNDITGPTGDLLPGQVVTYTIR
YENEGEGRAYGVFVVNPLPAVFDERTLTFVHGSGQYLTATREIVWTVGELAPKGQAGS
SGVLTYTVALTNGLPSGTVVANQATVYFPSVPEETPTNTWVNVVTPLVAEPQSLTTAY
MAPLPITLSGREVSGLPLTYEIVDRPHGGTLTGTAPNLTYTPGENFTGADAFTFRVSN
GTSTSRAAQISVMVTAQGDTTSPRVLWTSPADGAKGVVVLATPVYTDTAGPIYVPEIL
VGMSEPLDATTVTTTTVILRRSDGTVVPAWVRYDAAVHQIVMMPRTVLANGTYRAEVT
TGVKDSAGNTLSAPYTIQFTVGSERKVYVPVIQR"
sig_peptide complement(102949..103038)
/locus_tag="Caur_0080"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.983 at
residue 30"
misc_feature complement(101425..101973)
/locus_tag="Caur_0080"
/note="Right handed beta helix region; Region: Beta_helix;
pfam13229"
/db_xref="CDD:205410"
misc_feature complement(99169..99453)
/locus_tag="Caur_0080"
/note="fimbrial isopeptide formation D2 domain; Region:
RrgB_K2N_iso_D2; TIGR04226"
/db_xref="CDD:211949"
misc_feature complement(98494..98850)
/locus_tag="Caur_0080"
/note="Bacterial Ig-like domain; Region: Big_5; pfam13205"
/db_xref="CDD:205386"
gene 103793..104938
/locus_tag="Caur_0081"
/db_xref="GeneID:5828016"
CDS 103793..104938
/locus_tag="Caur_0081"
/note="KEGG: rca:Rcas_0440 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633724.1"
/db_xref="GI:163845680"
/db_xref="GeneID:5828016"
/translation="MPRLNPAIHLTFLLILTCFVRLLASIFANDIIDVRNYQQVAEVI
DRFGVSGLYRHTPDIYPYPPLWAGFEVAAYWLAQNNILSFSLAIRLPIIAADAGIVAV
IWQWVHRHSGSSRQAMQAAMIYALNPVSIIVSCWHGQFDALPLFWAALAMICTAWQWQ
AIALSIGIALKSFPVLLVPAFLWHLQPLRRQVQFGLLALVPVLLLLAPFVVDDASAVV
RELFGYRGHALLGIMVPVRTVYVPLVGERFPVETTRLLISLSAYGFLILYALTVWSMK
RRSMSVPMQATLIVLLFYVVYAGIAPQYLLWVLPFMIMAARPGAVLVYSAVSTLALLG
FYLYAVPDIFPFALTVSPRLAQVAYGLFGSLWWLTCGGLLVWFWRQR"
sig_peptide 103793..103879
/locus_tag="Caur_0081"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.808) with cleavage site probability 0.468 at
residue 29"
gene complement(105018..105093)
/locus_tag="Caur_R0001"
/note="tRNA-Arg5"
/db_xref="GeneID:5828017"
tRNA complement(105018..105093)
/locus_tag="Caur_R0001"
/product="tRNA-Arg"
/db_xref="GeneID:5828017"
gene complement(105220..106434)
/locus_tag="Caur_0082"
/db_xref="GeneID:5828018"
CDS complement(105220..106434)
/locus_tag="Caur_0082"
/note="PFAM: Arsenical pump membrane protein; Citrate
transporter;
KEGG: rrs:RoseRS_0950 citrate transporter"
/codon_start=1
/transl_table=11
/product="citrate transporter"
/protein_id="YP_001633725.1"
/db_xref="GI:163845681"
/db_xref="InterPro:IPR000802"
/db_xref="InterPro:IPR004680"
/db_xref="GeneID:5828018"
/translation="MTIISILTLGIVAATIIGVAVGRWPLLRADRTTITLIGAALLLG
IGAMSLEEAYAALDLDTIVLLFSMMVINGSLFLAGFFGVITQRVVQFARGPRSLLALV
IGASGILSALFLNDTIVLMMTPIVLDVTRALRRNPLPYLIGLAVAANVGSTATITGNP
QNIIIGSASKISYLDFAAALSPTALIGLVICWIVVLLVYRDEFRGGPLTTPDVLRTRV
YRPLLRKAALVISLMLIAFLVGVPVPLAAFVAAATLLATRRLRPERVFKTIDWNLLTF
FAGLFVVTHALDVQGWTDILFTNLAPLAQAGMVPFGLVSVVLSNLISNVPAVLLLQSL
IPAFADQERAWLTLAATATLAGNLTLLGSVANLIMAELAARWGVRVTFGAYLRVGLPV
TILTVAVSLILV"
sig_peptide complement(106366..106434)
/locus_tag="Caur_0082"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.906) with cleavage site probability 0.864 at
residue 23"
misc_feature complement(105223..106380)
/locus_tag="Caur_0082"
/note="Putative anion permease YbiR. Based on sequence
similarity, YbiR proteins are predicted to function as
anion translocating permeases in eubacteria, archaea and
plants. They belong to ArsB/NhaD superfamily of permeases
that have been shown to translocate...; Region:
YbiR_permease; cd01117"
/db_xref="CDD:29731"
misc_feature complement(order(105229..105267,105343..105402,
105469..105516,105574..105630,105664..105708,
105721..105753,105844..105888,105952..106023,
106033..106086,106090..106140,106207..106260,
106303..106344,106369..106380))
/locus_tag="Caur_0082"
/note="transmembrane helices; other site"
/db_xref="CDD:29731"
misc_feature complement(105223..106278)
/locus_tag="Caur_0082"
/note="Na+/H+ antiporter NhaD and related arsenite
permeases [Inorganic ion transport and metabolism];
Region: ArsB; COG1055"
/db_xref="CDD:31255"
gene complement(106505..107578)
/locus_tag="Caur_0083"
/db_xref="GeneID:5828019"
CDS complement(106505..107578)
/locus_tag="Caur_0083"
/note="PFAM: PHP domain protein;
SMART: phosphoesterase PHP domain protein;
KEGG: rrs:RoseRS_2550 PHP C-terminal domain protein"
/codon_start=1
/transl_table=11
/product="phosphotransferase domain-containing protein"
/protein_id="YP_001633726.1"
/db_xref="GI:163845682"
/db_xref="InterPro:IPR003141"
/db_xref="InterPro:IPR004013"
/db_xref="GeneID:5828019"
/translation="MNYPFIYPGAIHMHTTYSDGSATFPHLIAAAREAGLRWVIVTDH
DTLEGLPFAGWHDDVLVIVGHEITPDHNHFLALNVDTVISNELPPQQFIDEVYQRGGF
GIIAHPDERVRNSFKDIYRWDDWTIDGPSQRTGRVVGLELWNFMSDWGEHLTERNKLA
LVLYPQLGLSGPTLATLAWWDRLNMVGRRTFGIGGVDAHGFKRKAPWGEIEVFPYPWI
FRTLTNYLLLPEPLSSDATTATNQVYAALTAGRCYFVNRLDGDAPSIIFRLSRPGDLA
EIGDTISLAGGPLLVEVDVGADAYARLIVNGEVMTSGIRRIRQTVTDDGVYRVEAYWG
GKPWLFTNPIFVTAADAGREGSL"
misc_feature complement(107375..107545)
/locus_tag="Caur_0083"
/note="DNA polymerase alpha chain like domain; Region:
POLIIIAc; smart00481"
/db_xref="CDD:197753"
gene 107630..108739
/locus_tag="Caur_0084"
/db_xref="GeneID:5828020"
CDS 107630..108739
/locus_tag="Caur_0084"
/note="PFAM: glycosyl transferase group 1;
KEGG: rca:Rcas_4314 glycosyl transferase group 1"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_001633727.1"
/db_xref="GI:163845683"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:5828020"
/translation="MIVIDIDASRVTVAQRTGTERYSYELIAALDRIAPSDIHFRLYV
NGRRDQLPPVSERATIHDIRLPRLWTHLRLGPTSWRARPHVLFVPAHVVPLLHPPTVV
TIHDVGYRAFPETHTARRRLELELTTRWSLRAARHVITISHATKRDLINWYGADPNRI
TVTHLGCSSIFAPPADPRVVAAVTAHYGLDQRPYLLYIGTVQPRKNLSRVIDALALTI
AAGYDLDLVIAGKRGWLSEPIERRAGELGIANRVHFTGFVADADLPALLAGALAFVFP
SLYEGFGMPVVEAMACGTPVITSTSSSLPEIAGDAALLVDPLDTNAIAAAIMRLSDDQ
DLRATLRQRGLARAHLFNWETCARQTLAVLLQQSR"
misc_feature 107645..108715
/locus_tag="Caur_0084"
/note="This family is most closely related to the GT1
family of glycosyltransferases. mtfB (mannosyltransferase
B) in E. coli has been shown to direct the growth of the
O9-specific polysaccharide chain. It transfers two
mannoses into the position 3 of the...; Region:
GT1_mtfB_like; cd03809"
/db_xref="CDD:99981"
misc_feature <108197..108721
/locus_tag="Caur_0084"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
gene 109679..110044
/locus_tag="Caur_0085"
/db_xref="GeneID:5828021"
CDS 109679..110044
/locus_tag="Caur_0085"
/note="PFAM: protein of unknown function DUF309;
KEGG: rca:Rcas_1756 protein of unknown function DUF309"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633728.1"
/db_xref="GI:163845684"
/db_xref="InterPro:IPR005500"
/db_xref="GeneID:5828021"
/translation="MGSSDHQCSEAADALVCGIHLFNQGEFWHAHEQWEICWRAAQGM
DADFYQALIQSAAALVKWRQGNLRGLRLNWAKAQRRLSRLPSFYRGIDLARLQTAMTA
LVNDPELASAPVLDLPPAQ"
misc_feature 109718..109879
/locus_tag="Caur_0085"
/note="Domain of unknown function (DUF309); Region:
DUF309; pfam03745"
/db_xref="CDD:202755"
gene complement(110797..113220)
/locus_tag="Caur_0086"
/db_xref="GeneID:5828022"
CDS complement(110797..113220)
/locus_tag="Caur_0086"
/EC_number="3.4.21.53"
/note="KEGG: rrs:RoseRS_1605 ATP-dependent protease La;
TIGRFAM: ATP-dependent protease La;
PFAM: peptidase S16 lon domain protein; AAA ATPase central
domain protein; ATPase associated with various cellular
activities AAA_5;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease La"
/protein_id="YP_001633729.1"
/db_xref="GI:163845685"
/db_xref="InterPro:IPR001270"
/db_xref="InterPro:IPR001984"
/db_xref="InterPro:IPR003111"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR003959"
/db_xref="InterPro:IPR004815"
/db_xref="InterPro:IPR008268"
/db_xref="InterPro:IPR008269"
/db_xref="InterPro:IPR011704"
/db_xref="GeneID:5828022"
/translation="MTTTPANEQSPSPSGTTLYERPVLPLLDSVLFPQMLAPLFVSDE
RAINAVEQAVAEDRLVLAVAVRGPVDELTLGIDDLYPVGVEATVQRVRRLPDGTLSVV
LEGRQRMQIVSVVTEHPALRVLATPLETPPLDEDAALMVEALSRTILTTFEKIVRLSR
NLPDDAYLSALNSAEPGELADIIAALLPISVEDRQRILALADIQQRLRQLEILLAKEL
DLLELENRIHSQVQQEVDRSQRELFLREQLRAIQRELGQEDPSRREIMLLRERAAAAG
LPAHAMARFEEELARLELISPMSPEHGMLRTYLDWLISLPWSNASPENRDLRAAAAVL
ERNHYGLRKVKDRILEYIAVRQLAGPSRRAPILCFVGPPGVGKTSLGQSIAEALGRRF
VRLSLGGVHDEAEIRGHRRTYIGAMPGRILQRMKVAGTINPVFMLDEVDKLGSDFRGD
PAAALLEVLDPEQNSTFSDHYLDLPYDLSQTLFITTANVADDIPDPLLDRMELVELPG
YTEDEKLHIARRFLIPRQMTDSGLPPATIRFGDATIHTIIRNYTYEAGVRNLEREIGA
ICRKIARRIAEGRRYPRQITPRALPKLLGPPRFEIGKIDPRDQVGVAIGMVYTSAGGD
IMPVEVVLMDGKGNLLLTGQLGEVMQESAQAALSFARANASRLGIEIRHFDKLDIHVH
VPEGATPKDGPSAGVTIATALISALTGRTVRHDIAMTGEITLHGRVLPIGGVKEKVLG
AYRAGIRQIILPRRNEHDLVEIPVALRRQLTIHLIERIEQALELVLGPPPPKEPRRAP
RVIPRRDED"
misc_feature complement(110863..113157)
/locus_tag="Caur_0086"
/note="ATP-dependent Lon protease, bacterial type
[Posttranslational modification, protein turnover,
chaperones]; Region: Lon; COG0466"
/db_xref="CDD:30814"
misc_feature complement(111694..112188)
/locus_tag="Caur_0086"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(112087..112110)
/locus_tag="Caur_0086"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(111763..111765,111907..111909,
112084..112107))
/locus_tag="Caur_0086"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(111904..111921)
/locus_tag="Caur_0086"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(111721..111723)
/locus_tag="Caur_0086"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature complement(110863..111471)
/locus_tag="Caur_0086"
/note="Lon protease (S16) C-terminal proteolytic domain;
Region: Lon_C; pfam05362"
/db_xref="CDD:191262"
gene 113440..114276
/locus_tag="Caur_0087"
/db_xref="GeneID:5828023"
CDS 113440..114276
/locus_tag="Caur_0087"
/note="PFAM: alpha/beta hydrolase fold;
KEGG: gka:GK2874 hypothetical protein"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold-containing protein"
/protein_id="YP_001633730.1"
/db_xref="GI:163845686"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="InterPro:IPR003089"
/db_xref="GeneID:5828023"
/translation="MRDRHRAEDTTVKITINDITLHIEITGSGPALLAIHGFTGSGQT
WQPLVPTLAQDHTLVLVDLIGHGASAAPPDPHRYTIEQCVTDLLTLLDYLGIEHTDLL
GYSMGGRIGLLLTAHAPTRIRRQILIGASPGLADPAERTARLASDEALARLIEERGLE
WFVDYWAAQPIFASQQRLPPAVLAAQRAQRLAGSAQGYANALRGMSVGRQPSLWATLP
TITTPTLLITGALDSKFCAIAAQMTALMPHARHEIVPDAGHAVHLEQPDAVATLVSAF
LA"
misc_feature 113521..114270
/locus_tag="Caur_0087"
/note="2-succinyl-6-hydroxy-2,
4-cyclohexadiene-1-carboxylate synthase; Region:
menH_SHCHC; TIGR03695"
/db_xref="CDD:211863"
misc_feature 113524..>113763
/locus_tag="Caur_0087"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene complement(114596..115063)
/locus_tag="Caur_0088"
/db_xref="GeneID:5828024"
CDS complement(114596..115063)
/locus_tag="Caur_0088"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633731.1"
/db_xref="GI:163845687"
/db_xref="GeneID:5828024"
/translation="MAQAELDDRIKFLLVGVEVLFVYIFGLVRLATMEWLSLFAWIGL
LMWPFVHVMIVSAFILSFRLNFKDAVLYIAVHLFFLLAWLLQSDFANNHTWVVFGKFP
FIRGLEPFLIEWGSTLFLTTATATLVCYAVIFILVIVRIVQFLVSLNKDAQAA"
gene complement(115078..115332)
/locus_tag="Caur_0089"
/db_xref="GeneID:5828025"
CDS complement(115078..115332)
/locus_tag="Caur_0089"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633732.1"
/db_xref="GI:163845688"
/db_xref="GeneID:5828025"
/translation="MPLARLLPLGYAMRRMIRLWLIVCASVETEIVQAGGGDCAVFSG
DSCVRTAPLPLALSLPFTPADGNCQPDMRNTTTDNVAITI"
gene complement(115639..116187)
/locus_tag="Caur_0090"
/db_xref="GeneID:5828026"
CDS complement(115639..116187)
/locus_tag="Caur_0090"
/note="KEGG: rrs:RoseRS_1736 PBS lyase heat domain protein
repeat-containing protein"
/codon_start=1
/transl_table=11
/product="HEAT repeat-containing PBS lyase"
/protein_id="YP_001633733.1"
/db_xref="GI:163845689"
/db_xref="GeneID:5828026"
/translation="MILLLPDVLPLDPKERDDWIRRIHLLLKVAKQDNLLDLVKAILE
LLDGWRGKDQPEPPQPPSCPTGWSGQQWIVVDFFNLVIAILRVLEEWLVRDQQEPQQP
SSRSTGWGVQQWIVVGLLIALAVLVCIVAALLSVIGDVVTTLWMVLLQTPLWLVGAGL
VFALVGLVAFLGWWVYVKKRGM"
gene complement(116225..119440)
/locus_tag="Caur_0091"
/db_xref="GeneID:5828117"
CDS complement(116225..119440)
/locus_tag="Caur_0091"
/note="PFAM: HEAT domain containing protein; PBS lyase
HEAT domain protein repeat-containing protein;
SMART: Armadillo domain protein; AAA ATPase;
KEGG: rrs:RoseRS_1736 PBS lyase heat domain protein
repeat-containing protein"
/codon_start=1
/transl_table=11
/product="HEAT repeat-containing PBS lyase"
/protein_id="YP_001633734.1"
/db_xref="GI:163845690"
/db_xref="InterPro:IPR000225"
/db_xref="InterPro:IPR000357"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR004155"
/db_xref="InterPro:IPR007111"
/db_xref="GeneID:5828117"
/translation="MRQVCPRPERPSLAPSPPISEPSAQQATDTGYVAVGEGHASARS
DSVSVSDVASAPVIPLETILHTRRHLAILGEPGAGKSTTLQFIGLSYALATAQQPVER
LSITRPAVPVYLRLPVSASTITQQTVREAMVAEVRDRLQCSAAEAEAVLRSWQEWPGV
IILLDGLDEVPVALRVQVRERIKTLMRSGIGRVIITSRPSVLLHLGGLDEYTLKPFEH
FDRDVLPYLKGWLRVLKPDLQAQVVDNVAQDVMTKLRASPALRSLIGNPLLLRLIVQY
FVTTGDIAWNRADLYRQWVTEAWARARWRGAAATEEPHYLIALHTLAWHLHAGRDNTE
TALQTVLRTSGLAADDRAAADLLHRLQAQTGLLLRLSTGQDGLAHVRYVFAHQTLREY
LVALRLQQAWQRGKHRTWRFLQPRLHLPEWREPLALLVGLLTESEAQHLLRQILHAKS
SEERLLCRDLLLTANLAVESGYIHSVWESLAPKLARALRREHLSKETAAVLARVGKPA
VPMLAQALNDPSVEVRRAVVQALGLVGDAAVPVLAQALNDAQPEVRWAAVASLVAVGN
AAVDTLVQALGDDDAEVRRVIGQALLEIGDAAMPALVKALADKRANVREAAARALGES
GYAAAVSALVQSLRDENPWVRQAVAEALGAIGDAAAVVALAQALNDENVWVRQATARA
LGRIGGAAAMLPLTVALNDENPWVRQAVAEALGTIGDAAAVLPLTRALSDEHAWVRRS
AARALGQIGDGAAVPALAKALSDGDVQVRQQVVEALGCIGDSAAAAALVKALGDTNAE
VRWTTMKAFEQIGSRNVATLLRAISDGKWQFPWQDAQAWKIGNQAIEAIGSVFNGGDT
GKRMIATLALGETGNSAALPALERALRDTDLWVRRAALEALAKIGDQAVIVPALERAL
RDTDQWVRQTAAEMLVKIDDTAAVLPALERALRDADQWVRRTAAEALGKIGDASAVEA
LQRALADTESMGAAGRSRGARKDRRCVGGGGAAKGIGRYRSMGAAGRSGGARKDWRCV
GSGGAAKGIGRYRSMGAAGRSRGVGEDRRCKSGSITDTVTE"
misc_feature complement(118841..119251)
/locus_tag="Caur_0091"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(119198..119221)
/locus_tag="Caur_0091"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(118850..118852,118946..118948,
119195..119218))
/locus_tag="Caur_0091"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(118943..118960)
/locus_tag="Caur_0091"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(117005..118033)
/locus_tag="Caur_0091"
/note="FOG: HEAT repeat [Energy production and
conversion]; Region: COG1413"
/db_xref="CDD:31603"
misc_feature complement(117521..117604)
/locus_tag="Caur_0091"
/note="PBS lyase HEAT-like repeat; Region: HEAT_PBS;
cl15388"
/db_xref="CDD:199524"
misc_feature complement(117242..117331)
/locus_tag="Caur_0091"
/note="E-Z type HEAT repeats; Region: EZ_HEAT; smart00567"
/db_xref="CDD:128837"
misc_feature complement(117152..117238)
/locus_tag="Caur_0091"
/note="E-Z type HEAT repeats; Region: EZ_HEAT; smart00567"
/db_xref="CDD:128837"
misc_feature complement(116555..116815)
/locus_tag="Caur_0091"
/note="HEAT repeats; Region: HEAT_2; pfam13646"
/db_xref="CDD:205823"
misc_feature complement(116549..116629)
/locus_tag="Caur_0091"
/note="HEAT repeat; Region: HEAT; pfam02985"
/db_xref="CDD:202500"
misc_feature complement(116501..116587)
/locus_tag="Caur_0091"
/note="E-Z type HEAT repeats; Region: EZ_HEAT; smart00567"
/db_xref="CDD:128837"
gene complement(119415..119777)
/locus_tag="Caur_0092"
/db_xref="GeneID:5828118"
CDS complement(119415..119777)
/locus_tag="Caur_0092"
/note="KEGG: rrs:RoseRS_1736 PBS lyase heat domain protein
repeat-containing protein"
/codon_start=1
/transl_table=11
/product="HEAT repeat-containing PBS lyase"
/protein_id="YP_001633735.1"
/db_xref="GI:163845691"
/db_xref="GeneID:5828118"
/translation="MISLQLQQALQRLRDGICTSSDLEVVRAALQSGQIRLSTPTPGG
AIGGSGDAVLVVTRDGNVLQRLRGTAANQVKLADLTVRYLRAVIEDWQYLTVLTRGED
RRVPLTGVFIYASGLPAT"
gene complement(121577..122044)
/locus_tag="Caur_0093"
/db_xref="GeneID:5828119"
CDS complement(121577..122044)
/locus_tag="Caur_0093"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633736.1"
/db_xref="GI:163845692"
/db_xref="GeneID:5828119"
/translation="MARKDLDIRIKFLLIGAEVLFVGILSLMRIAITGWLVLIFGFLL
IAWVVFHLVLMSVFILNLRSSTMDMVLFITVHLSYLLAWLFQSDADDVRVRWVIQLFP
FTGGLEPFLAAWGGTLFLIATAVNLVCYAVIFILVIVRIVQFLVSLNKDAQAA"
gene 122914..123741
/locus_tag="Caur_0094"
/db_xref="GeneID:5828120"
CDS 122914..123741
/locus_tag="Caur_0094"
/note="TIGRFAM: naphthoate synthase;
PFAM: Enoyl-CoA hydratase/isomerase;
KEGG: gtn:GTNG_2771 naphthoate synthase"
/codon_start=1
/transl_table=11
/product="naphthoate synthase"
/protein_id="YP_001633737.1"
/db_xref="GI:163845693"
/db_xref="InterPro:IPR001753"
/db_xref="InterPro:IPR010198"
/db_xref="GeneID:5828120"
/translation="MPIEWVKVHDYTDIIYEHDAAGEGIAKITINRPEKRNAFRPETV
NELIDAFSRARDDERIGVILFTGAGDKAFCSGGDQSVRGIGGYVGKDQIPRLNVLDLQ
RLIRIIPKPVIALVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSNL
LARMVGDKKAREIWYLCRQYNAQQALEMGLVNAVVPLERLEDEGVQWAREILEKSPLA
IRMLKASINAAADGYAGLQQLAGDATLLYYLTEEAQEGKQAFLEKRKPNFRRFRRYP"
misc_feature 122953..123546
/locus_tag="Caur_0094"
/note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate synthase,
methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
dehydratase, and dienoyl-CoA isomerase; Region:
crotonase-like; cd06558"
/db_xref="CDD:119339"
misc_feature 122965..123702
/locus_tag="Caur_0094"
/note="Enoyl-CoA hydratase/isomerase family; Region: ECH;
pfam00378"
/db_xref="CDD:201191"
misc_feature order(123019..123021,123025..123027,123124..123126,
123136..123147,123154..123156,123268..123270,
123274..123282,123346..123351,123358..123360)
/locus_tag="Caur_0094"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119339"
misc_feature order(123142..123144,123280..123282)
/locus_tag="Caur_0094"
/note="oxyanion hole (OAH) forming residues; other site"
/db_xref="CDD:119339"
misc_feature order(123229..123231,123244..123246,123307..123318,
123352..123363,123379..123381,123385..123393,
123397..123402,123415..123420,123424..123429,
123433..123438,123445..123447,123478..123480,
123487..123489,123532..123534,123541..123546)
/locus_tag="Caur_0094"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
gene 124211..125116
/locus_tag="Caur_0095"
/db_xref="GeneID:5828121"
CDS 124211..125116
/locus_tag="Caur_0095"
/note="TIGRFAM: 1,4-dihydroxy-2-naphthoate
octaprenyltransferase;
PFAM: UbiA prenyltransferase;
KEGG: rca:Rcas_2084 1,4-dihydroxy-2-naphthoate
octaprenyltransferase"
/codon_start=1
/transl_table=11
/product="1,4-dihydroxy-2-naphthoate
octaprenyltransferase"
/protein_id="YP_001633738.1"
/db_xref="GI:163845694"
/db_xref="InterPro:IPR000537"
/db_xref="InterPro:IPR004657"
/db_xref="GeneID:5828121"
/translation="MTTKATSVPPSHLKIWLMASRPATLPAAVVPVLVGSALAYSSDA
FQPLVMLAALLGALFIQIGTNLANDYFDAQKGADTSERLGPVRVTQSGLLPARTVLTA
ALVSFGLAALAGIYLITVAGWPILVIGLLSIAAGILYTAGPFPLGYHGLGDLFTFVFF
GLVAVIGTDFAHTGQFRWIALWAALPIAMLVTAILVVNNLRDAPTDRKAGKRTLAVIF
GERFARSEFAILVIGAFVSLPLAWMWGGASPFTLLAWLTAPMALNLIDFVNRERGRAL
NKALVGAGRLHLAFGVLFAIGLLFG"
sig_peptide 124211..124330
/locus_tag="Caur_0095"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.982) with cleavage site probability 0.855 at
residue 40"
misc_feature 124241..125113
/locus_tag="Caur_0095"
/note="1,4-dihydroxy-2-naphthoate octaprenyltransferase;
Validated; Region: PRK06080"
/db_xref="CDD:180389"
gene 125639..127102
/locus_tag="Caur_0096"
/db_xref="GeneID:5828122"
CDS 125639..127102
/locus_tag="Caur_0096"
/note="TIGRFAM: O-succinylbenzoate-CoA ligase;
PFAM: AMP-dependent synthetase and ligase;
KEGG: gka:GK2872 O-succinylbenzoic acid--CoA ligase"
/codon_start=1
/transl_table=11
/product="o-succinylbenzoate--CoA ligase"
/protein_id="YP_001633739.1"
/db_xref="GI:163845695"
/db_xref="InterPro:IPR000873"
/db_xref="InterPro:IPR010192"
/db_xref="GeneID:5828122"
/translation="MLIPDWLARRAALHPHRPALIYAGTTYTFAELDRWAGAVASHLR
QLVTPGARVALLSRNRPGFVAIVHAAPRTAITLVPLNTRLTAAELAFQIQDSDPALLI
IEHDLLPVAREAAGNRPLIVLEELTAATTAPTAPAPPIDLDAMHTIIYTSGTTGRPKG
AILTAGNHWWNAIGSMLNLGLHEDDRWLAVLPLFHVGGLSILLRGAIYGIPVILHERF
DPALVRHDLDAQRITIVSLVAVMLQRLLAIDPSPFPPHLRCVLLGGGPAPQTLLEQCA
TRGIPVTQTYGMSEAASQAATLSPAESLIRLGSAGKPLLPVELSIVTPSGQPAAPGEV
GEICLRGPNISPGYLGLPPRSPTDWFHTGDLGYLDQEGYLYVVDRRSDLIIAGGENIY
PAEIEAILLSHPAIAEAGVVGLPDPEWGQRPVAAIVAQQPTTAEELIAYCRSRLAGYK
VPRTIVFLHELPRTAAGKLRRHELRAILLAQMSGNDH"
misc_feature 125639..127072
/locus_tag="Caur_0096"
/note="O-succinylbenzoic acid--CoA ligase; Provisional;
Region: PRK03640"
/db_xref="CDD:179618"
misc_feature 125720..126871
/locus_tag="Caur_0096"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
misc_feature 126983..127090
/locus_tag="Caur_0096"
/note="Domain of unknown function (DUF4009); Region:
DUF4009; pfam13193"
/db_xref="CDD:205374"
gene complement(131222..131860)
/locus_tag="Caur_0097"
/db_xref="GeneID:5828123"
CDS complement(131222..131860)
/locus_tag="Caur_0097"
/note="PFAM: protein of unknown function DUF1405;
KEGG: rca:Rcas_3542 protein of unknown function DUF1405"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633740.1"
/db_xref="GI:163845696"
/db_xref="InterPro:IPR009845"
/db_xref="GeneID:5828123"
/translation="MRQVRQLIDWIYALITGHPLLFWACMLINLFGVVWGGIVWYGPM
LASSPAWAWIFIPDCPAAALYATIAFILLRYGRQVPWFTAFAAFACIKYGLWTLAFWT
RHWLGAGTVEPLELMLFVSHIGLTCEGVLLATRIGPLGMTARAAVAAFFSLSILVDYG
LGFHPPLTWVVTPTFALWTAVILTSVLGFWLTRPSLVVAQRAEALGLQVPRE"
misc_feature complement(131285..131752)
/locus_tag="Caur_0097"
/note="Protein of unknown function (DUF1405); Region:
DUF1405; pfam07187"
/db_xref="CDD:148661"
gene complement(131916..132455)
/locus_tag="Caur_0098"
/db_xref="GeneID:5828124"
CDS complement(131916..132455)
/locus_tag="Caur_0098"
/note="PFAM: transferase hexapeptide repeat containing
protein;
KEGG: rca:Rcas_3543 transferase hexapeptide repeat
containing protein"
/codon_start=1
/transl_table=11
/product="hexapaptide repeat-containing transferase"
/protein_id="YP_001633741.1"
/db_xref="GI:163845697"
/db_xref="InterPro:IPR001451"
/db_xref="GeneID:5828124"
/translation="MNAMLETFSSDDLGSTATRKARLQSVPVPGPHNALWYFPQLAGG
YLRIMRNAALIQLARYTPFIAVKNMIYRWLGVNVAPHASVGLMVMFDIFFPEDITLGE
NCVIGYNTTILCHEVTRREWKRGPVVIGPDVTIGANCTILPGVVIGAGATVSAMSLVN
RDVPPGAFVGGVPIRRLDR"
misc_feature complement(131931..>132269)
/locus_tag="Caur_0098"
/note="Acetyltransferase (isoleucine patch superfamily)
[General function prediction only]; Region: WbbJ; COG0110"
/db_xref="CDD:30459"
misc_feature complement(131925..132215)
/locus_tag="Caur_0098"
/note="Maltose O-acyltransferase (MAT)-like: This family
is composed of maltose O-acetyltransferase, galactoside
O-acetyltransferase (GAT), xenobiotic acyltransferase
(XAT) and similar proteins. MAT and GAT catalyze the
CoA-dependent acetylation of the...; Region: LbH_MAT_like;
cd04647"
/db_xref="CDD:100053"
misc_feature complement(order(131940..131942,131988..131990,
132045..132047,132054..132056,132060..132062,
132123..132125,132141..132143,132147..132149,
132183..132185,132207..132209,132213..132215))
/locus_tag="Caur_0098"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:100053"
misc_feature complement(order(131937..131939,131943..131948,
131973..131978,131991..131996,132030..132032,
132045..132050,132054..132056,132201..132203,
132207..132209))
/locus_tag="Caur_0098"
/note="active site"
/db_xref="CDD:100053"
misc_feature complement(order(132201..132203,132207..132209))
/locus_tag="Caur_0098"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100053"
misc_feature complement(order(131925..131927,131937..131939,
131943..131948,131952..131954,131973..131978,
131991..131996,132000..132002,132030..132032,
132045..132050,132054..132056))
/locus_tag="Caur_0098"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:100053"
gene 132456..133331
/locus_tag="Caur_0099"
/db_xref="GeneID:5828125"
CDS 132456..133331
/locus_tag="Caur_0099"
/note="PFAM: regulatory protein IclR; Transcriptional
regulator IclR;
KEGG: rxy:Rxyl_2850 transcriptional regulator, IclR
family"
/codon_start=1
/transl_table=11
/product="transcriptional regulator IclR"
/protein_id="YP_001633742.1"
/db_xref="GI:163845698"
/db_xref="InterPro:IPR005471"
/db_xref="InterPro:IPR014757"
/db_xref="GeneID:5828125"
/translation="MLRTTNVSFAVPVGKKDDFPLHYDWKEVLNGEKRMVQSLDRAFD
VLEALAFADDDLSVSELSEQLDLPLATVHRLLSSLAARGYVTQEASTRRYGPGPRLLE
VAARAARSRRFDLIRIARAELVKLTAETGETSNLIVRQGDLAVYQEQIPSPHMVRMFT
EIGQRAPLYCTGGGKAILSALPIAELEQYLAGGHFERWTNRTITDPERLRAELMTARE
RGFALDDEEREEGVCCVAAPIFDRRGQVVGAISLSGPSTRLNRARAEELGPRVREAAL
ACSRQLGFHTTLTGK"
misc_feature 132564..133304
/locus_tag="Caur_0099"
/note="Transcriptional regulator [Transcription]; Region:
IclR; COG1414"
/db_xref="CDD:31604"
misc_feature 132567..132722
/locus_tag="Caur_0099"
/note="IclR helix-turn-helix domain; Region: HTH_IclR;
pfam09339"
/db_xref="CDD:150115"
misc_feature order(132624..132632,132657..132668,132672..132677,
132684..132689,132693..132698,132714..132722,
132735..132737)
/locus_tag="Caur_0099"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(132624..132626,132633..132635)
/locus_tag="Caur_0099"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
misc_feature 132921..133298
/locus_tag="Caur_0099"
/note="Bacterial transcriptional regulator; Region: IclR;
pfam01614"
/db_xref="CDD:201890"
gene complement(134516..135217)
/locus_tag="Caur_0100"
/db_xref="GeneID:5828126"
CDS complement(134516..135217)
/locus_tag="Caur_0100"
/note="PFAM: iron dependent repressor; FeoA family
protein;
KEGG: rca:Rcas_3322 iron (metal) dependent repressor, DtxR
family"
/codon_start=1
/transl_table=11
/product="FeoA family protein"
/protein_id="YP_001633743.1"
/db_xref="GI:163845699"
/db_xref="InterPro:IPR001367"
/db_xref="InterPro:IPR007167"
/db_xref="GeneID:5828126"
/translation="MTPVEDPNLPGRITPAIEDYLKAIYLLQQQVGAVTTTLLGEQRG
SRPASVTGMIKKLAEMNLVQHTPYQGVILTPAGERIALEVIRHHRLLELYLVEALGYS
WDEVHEEAERLEHHISEKLEARIAERLGFPDFDPHGDPIPGIDGVLPTTRAIRLADLP
LNQVARIVRVRDQAAERLRYLADLGLVPGARVTVVASAPFDGPLTVQIGTNEPTPLDR
RLARTIEVEVESEAA"
misc_feature complement(134738..135181)
/locus_tag="Caur_0100"
/note="Mn-dependent transcriptional regulator
[Transcription]; Region: TroR; COG1321"
/db_xref="CDD:31512"
misc_feature complement(135005..135178)
/locus_tag="Caur_0100"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
misc_feature complement(134789..134998)
/locus_tag="Caur_0100"
/note="Iron dependent repressor, metal binding and
dimerisation domain; Region: Fe_dep_repr_C; pfam02742"
/db_xref="CDD:202369"
misc_feature complement(134534..134758)
/locus_tag="Caur_0100"
/note="FeoA domain; Region: FeoA; pfam04023"
/db_xref="CDD:202856"
gene 135421..136197
/locus_tag="Caur_0101"
/db_xref="GeneID:5828127"
CDS 135421..136197
/locus_tag="Caur_0101"
/note="PFAM: Enoyl-CoA hydratase/isomerase;
KEGG: rle:RL0373 putative enoyl-CoA hydratase"
/codon_start=1
/transl_table=11
/product="enoyl-CoA hydratase/isomerase"
/protein_id="YP_001633744.1"
/db_xref="GI:163845700"
/db_xref="InterPro:IPR001753"
/db_xref="GeneID:5828127"
/translation="MSEESLVLSTIEGPIAILTLNRPQALNALSPALIDDLIRHLEAC
DADDTIRVIIITGAGRAFAAGADIKAMANATPIDMLTSGMIARWARIAAVRKPVIAAV
NGYALGGGCELAMMCDIIIASENAQFGQPEINLGIIPGAGGTQRLTRALGPYRAMELI
LTGATISAQEALAHGLVCRVCPPESLLDEARRIAQTIATKSPLAVQLAKEAVRMAAET
TVREGLAIELRNFYLLFASADQKEGMQAFIEKRAPNFSGR"
misc_feature 135421..136194
/locus_tag="Caur_0101"
/note="enoyl-CoA hydratase; Provisional; Region: PRK05862"
/db_xref="CDD:180295"
misc_feature 135439..136011
/locus_tag="Caur_0101"
/note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate synthase,
methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
dehydratase, and dienoyl-CoA isomerase; Region:
crotonase-like; cd06558"
/db_xref="CDD:119339"
misc_feature order(135496..135498,135502..135504,135598..135600,
135610..135624,135733..135735,135739..135747,
135811..135816,135823..135825)
/locus_tag="Caur_0101"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119339"
misc_feature order(135616..135618,135745..135747)
/locus_tag="Caur_0101"
/note="oxyanion hole (OAH) forming residues; other site"
/db_xref="CDD:119339"
misc_feature order(135685..135687,135709..135711,135772..135783,
135817..135828,135844..135846,135850..135858,
135862..135867,135880..135885,135889..135894,
135898..135903,135910..135912,135943..135945,
135952..135954,135997..135999,136006..136011)
/locus_tag="Caur_0101"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
misc_feature <135982..136188
/locus_tag="Caur_0101"
/note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate synthase,
methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
dehydratase, and dienoyl-CoA isomerase; Region:
crotonase-like; cl15762"
/db_xref="CDD:213139"
gene 136350..138815
/locus_tag="Caur_0102"
/db_xref="GeneID:5828128"
CDS 136350..138815
/locus_tag="Caur_0102"
/note="KEGG: ppd:Ppro_2908 multi-sensor hybrid histidine
kinase;
TIGRFAM: PAS sensor protein;
PFAM: response regulator receiver; ATP-binding region
ATPase domain protein; histidine kinase A domain protein;
PAS fold-3 domain protein; PAS fold-4 domain protein; PAS
fold domain protein;
SMART: PAS domain containing protein; PAC
repeat-containing protein"
/codon_start=1
/transl_table=11
/product="PAS sensor protein"
/protein_id="YP_001633745.1"
/db_xref="GI:163845701"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000700"
/db_xref="InterPro:IPR001610"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR013655"
/db_xref="InterPro:IPR013656"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:5828128"
/translation="MDIHERLRSLERENALLRQQLSILRAQISANLAPNQLPFDTLFH
QLPIPMVLFSLDGLAVAMNQANAQLVATPIDQVVGVYNIYNDPAAQKHGFVAAFESAR
RGQITTMPPTPYNTAEARLEGRVVDQQFWSETTYFPVYDVANRLILIGEINRDVTDWI
RVRDEEHRLAIALRDRERRFATLFDQLSLGIVVIEESGRILDCNRAVTAILGVERDEL
IGKMILQRTHPDDRERDLELWIELLNGERDSYTIEKRYFHKDGHIVYARMTCLAVRDE
NGEITFLVRLVEDVSARREAEAAIETGRRLLQDIIDQIPALIFVKDAEGRYLMVNERL
ASFSGYRPEEMIGKSDDELFAPALAAYYRAFDQEVIRERRPIQRDDDRWTADGLTAFT
TVKFPLFDHEGNLYGVAGISLDVTERRQLELERERIEQRLREAQRLESLGVMAGGIAH
DFNNLLVSVLGNVSLALNEVSADHSLYDLLVQIEQAALRATELTNHLLTYTGRHQPVM
QRIDLRRAVDEMQTILRSLVPHRIELIFHPSATPLPIEANIAQVRQVLMNLVINGAEA
IDGAGIVRITTELRELSATDMQKMEIGADQPPGRYAALIVQDTGHGMDELTKARIFDP
FFSTRFTGRGLGLAAVNGIIRAHRGALKLDTTLHAGTTFTIFWPLATAPDVSDDPPLP
SPSTVTSQPETTPGDGRMVLLVDDEPQVRQVAQRMLRRLGFTVHEAENSDIALQLMQE
YGSQIVLALIDLTMPGMTGDELATTLLEQFPTLRIILMSGFSQQELPPHLRTSGRVSF
LAKPFTLTTLTAAVTTALSSHTV"
misc_feature 136875..137249
/locus_tag="Caur_0102"
/note="PAS domain S-box; Region: sensory_box; TIGR00229"
/db_xref="CDD:211562"
misc_feature 136908..137219
/locus_tag="Caur_0102"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(136956..136958,136968..136970,136986..136988,
137025..137036,137115..137117,137130..137132)
/locus_tag="Caur_0102"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(137016..137018,137028..137030,137052..137054,
137061..137066,137151..137153,137157..137159)
/locus_tag="Caur_0102"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 137283..137597
/locus_tag="Caur_0102"
/note="PAS fold; Region: PAS_4; pfam08448"
/db_xref="CDD:117025"
misc_feature 137289..137594
/locus_tag="Caur_0102"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(137337..137339,137349..137351,137367..137369,
137406..137417,137493..137495,137508..137510)
/locus_tag="Caur_0102"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(137397..137399,137409..137411,137433..137435,
137442..137447,137526..137528,137532..137534)
/locus_tag="Caur_0102"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 138003..138344
/locus_tag="Caur_0102"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(138021..138023,138033..138035,138042..138044,
138165..138167,138171..138173,138177..138179,
138183..138188,138249..138260,138306..138308,
138312..138314,138327..138332,138336..138338)
/locus_tag="Caur_0102"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 138033..138035
/locus_tag="Caur_0102"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(138177..138179,138183..138185,138249..138251,
138255..138257)
/locus_tag="Caur_0102"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 138450..138758
/locus_tag="Caur_0102"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 138453..138758
/locus_tag="Caur_0102"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(138462..138467,138600..138602,138624..138626,
138684..138686,138741..138743,138750..138755)
/locus_tag="Caur_0102"
/note="active site"
/db_xref="CDD:29071"
misc_feature 138600..138602
/locus_tag="Caur_0102"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(138609..138614,138618..138626)
/locus_tag="Caur_0102"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 138750..138758
/locus_tag="Caur_0102"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 138858..140105
/locus_tag="Caur_0103"
/db_xref="GeneID:5828129"
CDS 138858..140105
/locus_tag="Caur_0103"
/note="KEGG: slo:Shew_0499 Xaa-Pro aminopeptidase family
enzyme"
/codon_start=1
/transl_table=11
/product="Xaa-Pro aminopeptidase family protein"
/protein_id="YP_001633746.1"
/db_xref="GI:163845702"
/db_xref="GeneID:5828129"
/translation="MTITPIEPSLRRQADVQNQWLAERLATLLPVLMERTGIDLWIVV
AREYNEDPVIMTLLPAPAMNARRRTILIFARRDDGVVDRLTLDRYGYGDLYQQVWNPD
TESQDDCLARIVGEYDPQRIGINTSATFAFADGISHHEYERLLAALGPLAARCVSAEP
LVIGWLERRIPAELAVYAELVALGHRLIATAFSRAVITPGITTTDDVVWWLRQTMHEA
GLRAWFQPTVSIQARGMPFNTPATRNRIWPGDLLHCDVGFCHLGLCTDQQQHAYVLAR
GETAPPPGLVTALAQANHLQDIVMAEMQVGRTGNQVLAAARERAISAGLQPSIYSHPL
GFHGHAAGPTIGLWDRQDGVPGAGDYPLYDETVYAIELNNVAIVPEWDDQPVRIALEE
DAVLTGGRMEWLHGRQTQLHVIE"
misc_feature 139419..140057
/locus_tag="Caur_0103"
/note="A family including aminopeptidase P, aminopeptidase
M, and prolidase. Also known as metallopeptidase family
M24. This family of enzymes is able to cleave amido-,
imido- and amidino-containing bonds. Members exibit
relatively narrow substrate specificity...; Region:
APP_MetAP; cd01066"
/db_xref="CDD:29969"
misc_feature order(139566..139568,139620..139622,139653..139655,
139884..139886,139968..139970,140028..140030)
/locus_tag="Caur_0103"
/note="active site"
/db_xref="CDD:29969"
gene 140184..141551
/locus_tag="Caur_0104"
/db_xref="GeneID:5828148"
CDS 140184..141551
/locus_tag="Caur_0104"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: rca:Rcas_2058 major facilitator superfamily MFS_1"
/codon_start=1
/transl_table=11
/product="major facilitator transporter"
/protein_id="YP_001633747.1"
/db_xref="GI:163845703"
/db_xref="InterPro:IPR001958"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:5828148"
/translation="MAVPETDTRRAIMTVLFVGVFMSALDSAIIGPIVPALRAAFAID
NTQVVLVTIIFTLCSLSSTTLMASLSDRYGRRNVYLLNVFGFALGSLIIALSHDLTMV
LIGRALQGVCAGGITPTASAVIGDVLPSAERAKALGLIGATSGMAFLVGPVLASLILA
VAAWQWIFLLNLPVAAAVIFLGWRALPRATAVHRATAATAFDWPGLTLLVLILVSITL
GINQLLDRLLGLTLWPWLFLLVALLTPLLAWREVRAPVPLLPPRLFTNRQLQIVYLLA
AGSGIAMGSIIFITSVAVNFGVPISQAGFFLLPLVFLASVTSIIAGRILPRIGGRMAM
LIGYGQLMIGTGLLGLPAAPFWLFILATLIMGSGLGIVVGGTLRALVLEEVAAGDRGV
AQSVINIAISIGTLIAVALMASIADAFDLSTAYLACTGAMALMTAISLALRRQFSPPS
TANAS"
misc_feature 140220..>140744
/locus_tag="Caur_0104"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(140262..140264,140271..140279,140283..140288,
140337..140339,140346..140351,140358..140360,
140370..140375,140379..140384,140520..140525,
140532..140537,140544..140549,140556..140558,
140592..140597,140604..140609,140625..140627)
/locus_tag="Caur_0104"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature <140994..141512
/locus_tag="Caur_0104"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 141006..>141548
/locus_tag="Caur_0104"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
gene 141613..142758
/locus_tag="Caur_0105"
/db_xref="GeneID:5828149"
CDS 141613..142758
/locus_tag="Caur_0105"
/note="PFAM: glycosyl transferase group 1;
KEGG: rrs:RoseRS_4045 glycosyl transferase, group 1"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_001633748.1"
/db_xref="GI:163845704"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:5828149"
/translation="MRVALVHDYLNQYGGAERVLEALHDLFPTAPVYTSIFDPTTMPA
AYRTWDIRTSFMQQLPAWRTQFRRYVALYPTAFERFDLSGYDLIISSSSAFAKGIIPR
PGALHICYCHTPMRFAWRTDDYVAREQINGIQAHLLPFLLNYLRIWDTVSANRVDLFV
ANSHEVAGRIARYYRRPAKVIPPPVDLPPYEPQPPEEFYLAGGRLIPYKRLELAIEAF
NRLRLPLKIFGDGRDRARLERMAGPNIEFLGWVDEATRLDLFARCRAFIFPGEEDFGI
TPLEVLAVGRPVIAYAAGGALETLIEGVTGRFFYQPTAAALAAAVALSRTDTIDPLVL
RHHAEQFSRERFLNTFRNFVTEALTAQREGRLFEFEQSLTGQRLLAV"
misc_feature 141613..142539
/locus_tag="Caur_0105"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature 141616..142665
/locus_tag="Caur_0105"
/note="This family is most closely related to the GT1
family of glycosyltransferases. wbaZ in Salmonella
enterica has been shown to possess the mannosyl
transferase activity. The members of this family are found
in certain bacteria and Archaea; Region: GT1_wbaZ_like;
cd03804"
/db_xref="CDD:99976"
misc_feature order(141655..141657,142216..142224,142375..142377,
142441..142443)
/locus_tag="Caur_0105"
/note="putative ADP-binding pocket [chemical binding];
other site"
/db_xref="CDD:99976"
gene 142857..143489
/locus_tag="Caur_0106"
/db_xref="GeneID:5828150"
CDS 142857..143489
/locus_tag="Caur_0106"
/note="PFAM: lipopolysaccharide biosynthesis protein;
KEGG: rca:Rcas_3666 lipopolysaccharide biosynthesis
protein"
/codon_start=1
/transl_table=11
/product="lipopolysaccharide biosynthesis protein"
/protein_id="YP_001633749.1"
/db_xref="GI:163845705"
/db_xref="InterPro:IPR003856"
/db_xref="GeneID:5828150"
/translation="MELTTLLRIVRRFWLLMLVPALIAGGLSLWFDLQQPPRYTATAR
LLITYPATTATDSAEIWQITEYIIDDMPQVVSSASFAAKVSPLLATRNINLTLAEIQQ
GLRINPLHRAVDISGEASSPAAAQALVEAAITVLQTEGLTFWGRTDTQLSVVVLDGVG
TPQPATSLRSVVFDAALRTALGLIAGFALAVAATVLYERRENRLWKSATM"
misc_feature 142857..>143036
/locus_tag="Caur_0106"
/note="Uncharacterized protein involved in
exopolysaccharide biosynthesis [Cell envelope biogenesis,
outer membrane]; Region: GumC; COG3206"
/db_xref="CDD:33019"
gene 143468..144121
/locus_tag="Caur_0107"
/db_xref="GeneID:5828151"
CDS 143468..144121
/locus_tag="Caur_0107"
/note="PFAM: lipopolysaccharide biosynthesis protein;
KEGG: rrs:RoseRS_4043 lipopolysaccharide biosynthesis
protein"
/codon_start=1
/transl_table=11
/product="lipopolysaccharide biosynthesis protein"
/protein_id="YP_001633750.1"
/db_xref="GI:163845706"
/db_xref="InterPro:IPR003856"
/db_xref="InterPro:IPR005829"
/db_xref="GeneID:5828151"
/translation="MEIRDYVNVLVKRWWVIVLTAIAAVGSAYVISKLLPQTYRSQAV
YLALANQADNGLNIVLRNSMNSYRELVMQPSVLDQISQQIGLDISGERLMEDVNIQPR
PDEQKIVIEVDLPRLDQSQALADAVGERIVAEVNRINATLEGTARINVTRIQPARLVE
IRPNTRINMLAGAILGLVLGIVLAFVLEYLDDTLKTSEDVERFVGLPTLGAIPLSER"
misc_feature 143468..144106
/locus_tag="Caur_0107"
/note="Capsular polysaccharide biosynthesis protein [Cell
envelope biogenesis, outer membrane]; Region: COG3944"
/db_xref="CDD:33725"
misc_feature 143468..144106
/locus_tag="Caur_0107"
/note="Chain length determinant protein; Region: Wzz;
cl15801"
/db_xref="CDD:210201"
gene 144194..144838
/locus_tag="Caur_0108"
/db_xref="GeneID:5828152"
CDS 144194..144838
/locus_tag="Caur_0108"
/EC_number="2.7.10.2"
/note="TIGRFAM: capsular exopolysaccharide family;
KEGG: rca:Rcas_3668 non-specific protein-tyrosine kinase"
/codon_start=1
/transl_table=11
/product="exopolysaccharide tyrosine-protein kinase"
/protein_id="YP_001633751.1"
/db_xref="GI:163845707"
/db_xref="InterPro:IPR005702"
/db_xref="GeneID:5828152"
/translation="MIVTSSSEQVLITLREPASAAAEAYRTLRTNILFSSLDKPIHTL
LITSAEPTPEKSLTAANLAVTMAQAEQRVLLVDCDLRQPMLHTIFGLANEQGLTSAIL
DQEAPLAIQPTEVPGLSLLPSGPLPPRPADLLGSRRMEGLLHRLRQAADIVIFDTPPV
QNVTDALVLSTRVDGVLLVVQAGRSRRDRVREARQKLEKVKANLLGVVLSNARL"
misc_feature 144260..144820
/locus_tag="Caur_0108"
/note="capsular exopolysaccharide family; Region: eps_fam;
TIGR01007"
/db_xref="CDD:130080"
misc_feature 144356..144820
/locus_tag="Caur_0108"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
gene 144907..145593
/locus_tag="Caur_0109"
/db_xref="GeneID:5828153"
CDS 144907..145593
/locus_tag="Caur_0109"
/note="PFAM: response regulator receiver; transcriptional
regulator domain protein;
KEGG: rca:Rcas_1176 two component transcriptional
regulator, winged helix family"
/codon_start=1
/transl_table=11
/product="response regulator receiver"
/protein_id="YP_001633752.1"
/db_xref="GI:163845708"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:5828153"
/translation="MQPTILVVDDEASIRNVAKAYLEHAGYRVLCATTGPEGLQMALE
EQPDLIVLDLMLPGMDGMEITARLRERSDVYILMLTARSDEMDRVAGLRVGADDYLTK
PFSPRELVARVEAILRRQRNKTAKSSLMRFTHVEIDPEAREARANGQLLELTPTEFDL
LLALARNHNRVLSREDLIEKVWGADFFGTDRVVDVYVSQLRRKIEAITGENVIRTARG
VGYRFVDTPA"
misc_feature 144913..145587
/locus_tag="Caur_0109"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature 144922..145257
/locus_tag="Caur_0109"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(144931..144936,145063..145065,145087..145089,
145144..145146,145201..145203,145210..145215)
/locus_tag="Caur_0109"
/note="active site"
/db_xref="CDD:29071"
misc_feature 145063..145065
/locus_tag="Caur_0109"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(145072..145077,145081..145089)
/locus_tag="Caur_0109"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 145210..145218
/locus_tag="Caur_0109"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 145294..145575
/locus_tag="Caur_0109"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature order(145366..145368,145423..145428,145480..145482,
145489..145491,145513..145518,145549..145551,
145564..145566)
/locus_tag="Caur_0109"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 145630..146682
/locus_tag="Caur_0110"
/db_xref="GeneID:5828154"
CDS 145630..146682
/locus_tag="Caur_0110"
/EC_number="2.7.13.3"
/note="PFAM: ATP-binding region ATPase domain protein;
histidine kinase HAMP region domain protein; histidine
kinase A domain protein;
KEGG: rrs:RoseRS_0804 integral membrane sensor signal
transduction histidine kinase"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_001633753.1"
/db_xref="GI:163845709"
/db_xref="InterPro:IPR000005"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:5828154"
/translation="MRFWRQLRWQMIGAQMLVVVVGVVTLNLTANILIEQSIAPDQVA
TVRTAVVQALTVAAVAATIAGLTTSILLVQVILRSLRSIARSSRRIAAGRYDERVTVP
ASDELRAVAESFNQMAEALEQIEQRRITMIGNVAHELRTPLAGIEGYLEGLIDGVLPN
TADTFLDMKQEVRRLRRLVDDLQTLSRVEAGQIALHFTTFDVNDVIRRVVAQIQPQVL
DSCLQVQFAPDQQPILVHADADRVAQILLNLLGNAVRYTPEGGCITVRSELNNDNVQV
IVEDTGIGISAEHLPFIFERFYRADPSRARTSGGSGIGLTIARHLAWAMGGDISAASA
GIGKGSTFTLTLPRAG"
misc_feature <145906..145998
/locus_tag="Caur_0110"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature order(145945..145950,145954..145959,145966..145971,
145975..145980,145987..145992)
/locus_tag="Caur_0110"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature 146002..>146109
/locus_tag="Caur_0110"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(146020..146022,146032..146034,146044..146046,
146053..146055,146065..146067,146074..146076)
/locus_tag="Caur_0110"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 146038..146040
/locus_tag="Caur_0110"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 146353..>146604
/locus_tag="Caur_0110"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(146371..146373,146383..146385,146392..146394,
146461..146463,146467..146469,146473..146475,
146479..146484,146563..146574)
/locus_tag="Caur_0110"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 146383..146385
/locus_tag="Caur_0110"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(146473..146475,146479..146481,146563..146565,
146569..146571)
/locus_tag="Caur_0110"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 147218..147328
/locus_tag="Caur_0111"
/db_xref="GeneID:5828155"
CDS 147218..147328
/locus_tag="Caur_0111"
/note="KEGG: rrs:RoseRS_3211 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633754.1"
/db_xref="GI:163845710"
/db_xref="GeneID:5828155"
/translation="MQTLQPKNPYVRIALRRAARGTGSSDAFLDQRTALQ"
gene 147383..147853
/locus_tag="Caur_0112"
/db_xref="GeneID:5828156"
CDS 147383..147853
/locus_tag="Caur_0112"
/note="KEGG: rrs:RoseRS_3211 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633755.1"
/db_xref="GI:163845711"
/db_xref="GeneID:5828156"
/translation="MALRAYAPERLTQDVDIIIHARDEQVARAAFTAAGYRIGNPLPI
SRFTAHPQDETGYSIDVLVLNEPWLDEALAQPVCDCAGFPVLARQFLILMKLQAGRAQ
DIADITRLLRRTDHTERSIARTTVATYAPDLIDDFDALVVLTDLEFGTESSAAT"
gene complement(148444..150741)
/locus_tag="Caur_0113"
/db_xref="GeneID:5828157"
CDS complement(148444..150741)
/locus_tag="Caur_0113"
/EC_number="2.4.1.129"
/note="PFAM: penicillin-binding protein transpeptidase;
Penicillin-binding protein dimerisation domain;
KEGG: rca:Rcas_1673 peptidoglycan glycosyltransferase"
/codon_start=1
/transl_table=11
/product="peptidoglycan glycosyltransferase"
/protein_id="YP_001633756.1"
/db_xref="GI:163845712"
/db_xref="InterPro:IPR001460"
/db_xref="InterPro:IPR005311"
/db_xref="GeneID:5828157"
/translation="MARLIALRSILLLVVVVLVSRLAQLQLIETDTQRFGADIEVTTR
RYLTNQPRRGEIFDARGVLLAESVPIYNLAVIPGQLPSSSAAPEQRALTLARLAQIAE
LPATLVIDPGTAIDTTPGLRSDLRSFGSLPTASDVVTMTIAPSDVLRALDVSQKYRDV
ATLVNPIEQLLTQANVRSYQPIVIKEDISPELALALRENANYLPGARVVEGFRRRYPL
SGEIPSLSHLLGYVGRINACELVAVNPASSWLRALTDITANAPTCGLMAKSIEPTSVG
LPPYLSSDQIGKDGLEGAYESVLRGQMGIDSLLVDALQRPVSGVTTLRAVANGHDLIL
TIDTRFQAEVERILQRWINVGEERRLAAREAHKRAYEPIVAGVAVALDPRDGRILAMV
SLPDYDNNIWVDPARIAELQALLAPPDAETQQTLQRLAPFTNRAIAGLYPPGSTVKQF
VGAVALQQGIIAADTQLRDPGLLRLIERSGAEFILPNSVRNRDNGLINVRDALRLSSN
VFFASIAGGNDQAINLDQRALRITGLGIDQLVEGLSWFNFGRPTGVDLVGEASGRVPT
QAWKAQVLREAWTTGDTYNTAIGQGYLEVTPLQLAVAAGAVATDGTLYRPHLVDRIVD
ENGQLIQQMQPEAIGQVPIDPRHLAAIREGLFASITDGLGVAAREVCSGLRIAGKTGT
AEFGPLLTTADGRLVRQSHAWFVGFAPYENPEIVVAVLVEGVGDLNDGSSTIAVPAVT
QIMQAYFGITPPANRPAICPVLPGE"
sig_peptide complement(150670..150741)
/locus_tag="Caur_0113"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.949) with cleavage site probability 0.539 at
residue 24"
misc_feature complement(149779..150594)
/locus_tag="Caur_0113"
/note="Penicillin-binding Protein dimerisation domain;
Region: PBP_dimer; pfam03717"
/db_xref="CDD:202738"
misc_feature complement(148498..150591)
/locus_tag="Caur_0113"
/note="penicillin-binding protein 2; Region: pbp2_mrdA;
TIGR03423"
/db_xref="CDD:200273"
misc_feature complement(148510..149616)
/locus_tag="Caur_0113"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; pfam00905"
/db_xref="CDD:144486"
gene complement(150787..151326)
/locus_tag="Caur_0114"
/db_xref="GeneID:5828158"
CDS complement(150787..151326)
/locus_tag="Caur_0114"
/note="KEGG: rca:Rcas_1672 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633757.1"
/db_xref="GI:163845713"
/db_xref="GeneID:5828158"
/translation="MGNSQPRRLEERLARELGLLLILLVIALIQVTLLTGPTGFSVPI
LLVLAIARALVGSSTAEPVRGLIRSLWWAFYGGLALDVLGSLPIGSHAIAQLLAVIVV
GLATRRFAVERPIVPLLAVAFGTLIYEAVLWLIVLPPISDWQTYGLIVMLPSLLLALI
PTLPVVAIVHRLVRNTEYQ"
misc_feature complement(<150922..>151119)
/locus_tag="Caur_0114"
/note="rod shape-determining protein MreD; Region:
shape_MreD; TIGR03426"
/db_xref="CDD:211818"
gene complement(151299..152207)
/locus_tag="Caur_0115"
/db_xref="GeneID:5828159"
CDS complement(151299..152207)
/locus_tag="Caur_0115"
/note="in some organisms this protein is a transmembrane
protein while in others it is periplasmic; involved in
some organisms with other components of the MreBCD complex
and with penicillin binding proteins in the periplasm or
cell wall"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein MreC"
/protein_id="YP_001633758.1"
/db_xref="GI:163845714"
/db_xref="InterPro:IPR007221"
/db_xref="GeneID:5828159"
/translation="MRDFLDERPLKLRREVAGDRGYWRVFALALSLVLVSVLLIVLDR
QGVIAPARLMVRETIQPLAGWLTQRRSELLSWWATPRDAATMQARIAELEAENTRLAA
EVLRLEQARVENIFLRQQLAITQSYPWTILGAEVMIRAPDAARRVLTIARGANDGVRV
GMAVIGQQPGGPPALIGVVEAVGPRTADVLMITDISSQLSVRLLQADTAPLGLMQGQW
QRGSRMRVELIDRSITMREGDHVVTAGISGALNLPLDLASMPTAVPIGVVEAVRQEGQ
RQIGEIRPFVDPDQVRYVWVILSQDD"
misc_feature complement(151302..152078)
/locus_tag="Caur_0115"
/note="rod shape-determining protein MreC; Provisional;
Region: PRK13922"
/db_xref="CDD:184397"
misc_feature complement(151317..151805)
/locus_tag="Caur_0115"
/note="rod shape-determining protein MreC; Region: MreC;
pfam04085"
/db_xref="CDD:202883"
gene complement(152211..153290)
/locus_tag="Caur_0116"
/db_xref="GeneID:5828160"
CDS complement(152211..153290)
/locus_tag="Caur_0116"
/note="functions in MreBCD complex in some organisms"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein MreB"
/protein_id="YP_001633759.1"
/db_xref="GI:163845715"
/db_xref="InterPro:IPR001023"
/db_xref="InterPro:IPR004753"
/db_xref="GeneID:5828160"
/translation="MGLNPFNTIFGAFSRDLGIDLGTANTLVHVRGKGIVISEPSVVA
IDTRTKKVHAVGAEAKAMVGKTPANIVAVRPLKDGVIADFDVVEQMLAYFIKKAHTYA
ALPLIDPRPRVVVGVPSGVTEVEKRAAREAALNAKAREAYVVEEPMAAAIGAGLPVEE
PIGSMIVDIGGGTTEIAVIALGGIVINHSIRIAGDEIDEAIIQFARREYNLLIGERMA
EKAKIAAGSAYPLDEEIKVVLRGRDLLTGLPKAIEVSSVELREGIAGPVNAIVAEVRA
ALEETPPELVADIMEHGIMLAGGGSLLHGLDKRIAAETKMPVHIAQDPLSCVARGAGK
MVEHFDNSVYQDILMRTQTTRRVRR"
misc_feature complement(152271..153263)
/locus_tag="Caur_0116"
/note="rod shape-determining protein MreB; Provisional;
Region: PRK13927"
/db_xref="CDD:184401"
misc_feature complement(152271..153242)
/locus_tag="Caur_0116"
/note="MreB and similar proteins; Region: MreB_like;
cd10225"
/db_xref="CDD:212668"
misc_feature complement(order(152307..152309,152316..152318,
152382..152387,152391..152399,152622..152627,
152634..152636,152706..152711,152772..152783,
152787..152789,152853..152855,153054..153056,
153216..153227,153231..153233))
/locus_tag="Caur_0116"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212668"
misc_feature complement(order(152787..152789,153231..153233))
/locus_tag="Caur_0116"
/note="Mg binding site [ion binding]; other site"
/db_xref="CDD:212668"
misc_feature complement(order(152271..152273,152343..152345,
152439..152441,152448..152450,152538..152540,
152547..152549,152571..152573,152640..152642,
152646..152648,152742..152744,152802..152804,
152808..152810,153081..153083,153105..153107,
153153..153155))
/locus_tag="Caur_0116"
/note="putative protofilament interaction site
[polypeptide binding]; other site"
/db_xref="CDD:212668"
misc_feature complement(order(152325..152327,152334..152336,
152340..152342,152415..152423,152799..152801,
152823..152828))
/locus_tag="Caur_0116"
/note="RodZ interaction site [polypeptide binding]; other
site"
/db_xref="CDD:212668"
gene 153639..155729
/locus_tag="Caur_0117"
/db_xref="GeneID:5828161"
CDS 153639..155729
/locus_tag="Caur_0117"
/EC_number="6.6.1.1"
/note="KEGG: mba:Mbar_A1776 magnesium-chelatase subunit;
PFAM: magnesium chelatase ChlI subunit; von Willebrand
factor type A;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="magnesium chelatase"
/protein_id="YP_001633760.1"
/db_xref="GI:163845716"
/db_xref="InterPro:IPR000523"
/db_xref="InterPro:IPR002035"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:5828161"
/translation="MNITNLPQRPVYPFSAIVGQERLKRALILNAINSRIGGVLIRGE
KGTAKSTAVRALTRLLPSITVVVDCPYSCDPDTPAALCADCQERLKQGPLPTMVRPIR
LVELPVSASEDRVVGSLDLEHAITEGQRRFEPGLLAQVNRGVLYVDEVNLLDDHLVDL
LLDAAAMGINTVEREGVSVSHPARFILVGTMNPEEGELRPQLLDRFGLAVEVVGLTDV
NDRIAVIERRMAYEADPIGFIQQWQAAEETLAQRIAAARALLPHVRIDRTDMAVVASL
CIEMGVDGHRADLTILETARTHAAWSGRRTLVAEDIRLAAELALPHRMRRQPFGEVKL
DEQRLASILDQYGKRAEEVSVQAEVKKNPDLTDVSETNDEGGNESGGGSTTMPLGGAG
QPEATAPVSEQQTGGTQHRAGDLFKPRRLEATPDRTQRRAPGRRSRSRTTRKQGRYIT
SRRATKVTDLALDATLREAAIYQRKRRTELLHTVGMPHRRRPKILIKRTDLRQKVRVR
RTRNAVCFVVDASWSMAAEERMQATKAAVLSLLRDAYQRRDQVGLVSFQRDYARVLLP
LTNSVELAQRRLQSMPTGGKTPLSRGMLTAFELLERARRRDAEVVPLMVLLTDGQANV
SISDLPPQQEAYRIAEMIAEHQIHAIVIDTEHPHFERGLSRRLAEYLRGTYYRLEDLH
DDGLVRAVRQQMRS"
misc_feature 153672..155675
/locus_tag="Caur_0117"
/note="cobaltochelatase subunit; Region: Cob-chelat-sub;
TIGR02442"
/db_xref="CDD:162859"
misc_feature 155172..155714
/locus_tag="Caur_0117"
/note="Magnesium chelatase: Mg-chelatase catalyses the
insertion of Mg into protoporphyrin IX (Proto). In
chlorophyll biosynthesis, insertion of Mg2+ into
protoporphyrin IX is catalysed by magnesium chelatase in
an ATP-dependent reaction. Magnesium chelatase is...;
Region: vWA_Magnesium_chelatase; cd01451"
/db_xref="CDD:29224"
misc_feature order(155193..155195,155199..155201,155205..155207,
155397..155399,155493..155495)
/locus_tag="Caur_0117"
/note="metal ion-dependent adhesion site (MIDAS); other
site"
/db_xref="CDD:29224"
gene 155819..157381
/locus_tag="Caur_0118"
/db_xref="GeneID:5828042"
CDS 155819..157381
/locus_tag="Caur_0118"
/note="PFAM: RNA binding S1 domain protein;
KEGG: rrs:RoseRS_3968 RNA binding S1 domain protein"
/codon_start=1
/transl_table=11
/product="RNA-binding S1 domain-containing protein"
/protein_id="YP_001633761.1"
/db_xref="GI:163845717"
/db_xref="InterPro:IPR003029"
/db_xref="GeneID:5828042"
/translation="MTDQVRREEVAAGELPDTPHTAASAPAAEAAVAAHEQAAEAAAP
TPEEEAVLPAATGEADASATAPTAAGESASSGSEATGASFTPVSDDQPHKPRRLKDLQ
PGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRIETPSEVVQIGDTVKVWVKS
IEPEARRISLTMRDPARAETPRRARQPQPQQQQPRRQEVDREKLAALRVGDVVEGVIT
GFAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAVKVGERYQFKILEIDGEAARISL
SLRRALRTQRMQQLETGQILEGTVSGIAPFGAFVDIGVGRDGLVHISALAPHRVEKVE
DVVKVGDKVKVKVLGVDQQSKRISLTMRLEEEQPASETTTEPATTPAEPAPARAGRSN
MERFAAAAQAARERSERGERGERGERSERGERGERGERNERRDRRDRRAAQTAPETYV
VGEDDDETFEGNATLEDLLTKFGGSSNRRDRDRDRRRRDYDDDEDDMERPTNRRQRDA
IRRTLQQIGHDE"
misc_feature 156128..156331
/locus_tag="Caur_0118"
/note="S1_Tex: The C-terminal S1 domain of a transcription
accessory factor called Tex, which has been characterized
in Bordetella pertussis and Pseudomonas aeruginosa. The
tex gene is essential in Bortella pertusis and is named
for its role in toxin expression; Region: S1_Tex; cd05685"
/db_xref="CDD:88440"
misc_feature order(156152..156154,156176..156178,156206..156208,
156212..156214)
/locus_tag="Caur_0118"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88440"
misc_feature 156446..156622
/locus_tag="Caur_0118"
/note="S1_like: Ribosomal protein S1-like RNA-binding
domain. Found in a wide variety of RNA-associated
proteins. Originally identified in S1 ribosomal protein.
This superfamily also contains the Cold Shock Domain
(CSD), which is a homolog of the S1 domain; Region:
S1_like; cl09927"
/db_xref="CDD:209094"
misc_feature order(156470..156472,156494..156496,156524..156526,
156530..156532)
/locus_tag="Caur_0118"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88416"
misc_feature 156695..156898
/locus_tag="Caur_0118"
/note="S1_like: Ribosomal protein S1-like RNA-binding
domain. Found in a wide variety of RNA-associated
proteins. Originally identified in S1 ribosomal protein.
This superfamily also contains the Cold Shock Domain
(CSD), which is a homolog of the S1 domain; Region:
S1_like; cl09927"
/db_xref="CDD:209094"
misc_feature order(156719..156721,156743..156745,156773..156775,
156779..156781)
/locus_tag="Caur_0118"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88416"
gene 157515..157688
/locus_tag="Caur_0119"
/db_xref="GeneID:5828043"
CDS 157515..157688
/locus_tag="Caur_0119"
/note="PFAM: ribosomal protein L34;
KEGG: rca:Rcas_1423 ribosomal protein L34"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L34"
/protein_id="YP_001633762.1"
/db_xref="GI:163845718"
/db_xref="InterPro:IPR000271"
/db_xref="GeneID:5828043"
/translation="MPKRTWQPKRIPRRRKHGFRARMATKDGREVLRRRRLKGRWKLT
VSDERRAVRRGHR"
gene 157782..158189
/locus_tag="Caur_0120"
/db_xref="GeneID:5828044"
CDS 157782..158189
/locus_tag="Caur_0120"
/note="TIGRFAM: ribonuclease P protein component;
PFAM: ribonuclease P protein;
KEGG: rca:Rcas_1424 ribonuclease P protein component"
/codon_start=1
/transl_table=11
/product="ribonuclease P protein component"
/protein_id="YP_001633763.1"
/db_xref="GI:163845719"
/db_xref="InterPro:IPR000100"
/db_xref="GeneID:5828044"
/translation="MRRAYRLRRPEQFRRVRQEGRTFTSPWLILTVAPARRRTLRCGF
VVSRRVGGAVQRNRARRRVREAVRLLLPRLTAGYDMVFTIRTPEVIDAPFTQLQDDIT
ALLRQACLLPAPTNETVSPVSDTPLPQHERGSQ"
misc_feature 157788..158108
/locus_tag="Caur_0120"
/note="Ribonuclease P; Region: Ribonuclease_P; pfam00825"
/db_xref="CDD:201459"
gene 158186..159130
/locus_tag="Caur_0121"
/db_xref="GeneID:5828045"
CDS 158186..159130
/locus_tag="Caur_0121"
/note="PFAM: 60 kDa inner membrane insertion protein;
KEGG: rrs:RoseRS_3965 60 kDa inner membrane insertion
protein"
/codon_start=1
/transl_table=11
/product="60 kDa inner membrane insertion protein"
/protein_id="YP_001633764.1"
/db_xref="GI:163845720"
/db_xref="InterPro:IPR001708"
/db_xref="GeneID:5828045"
/translation="MNIWSAFVGLLEQLLLFFSSLTGNMALGIVLFTIAARLFILPLT
LSSLRSSRRMQEVQPILKEIQRKYGKDPQRLQEETLRVYREHKINPVGGCLPLLLQLP
IFFGVYQAVYHLMVPEQRVNLSAAAAEMLKDERLAQILAAPFFGMDLGVPAFGPNGFA
GFAYLILPVLSIVLQLMQQLMATPRVQDPQQKAFTQAMLIMPFVFGYIAFTFPTGAVL
YWVVSSVVGVVQQYFTSGWGSLANYLRFLPPDNRPTPTLALASASTGSTSESQPETPK
IDFWSVMRPLTEAAVEESDPTHTEQRPSRQHPNPRRRR"
misc_feature 158255..158887
/locus_tag="Caur_0121"
/note="membrane protein insertase, YidC/Oxa1 family,
C-terminal domain; Region: yidC_oxa1_cterm; TIGR03592"
/db_xref="CDD:211846"
gene 159170..159838
/locus_tag="Caur_0122"
/db_xref="GeneID:5828046"
CDS 159170..159838
/locus_tag="Caur_0122"
/note="PFAM: single-stranded nucleic acid binding R3H
domain protein;
KEGG: rrs:RoseRS_3964 single-stranded nucleic acid binding
R3H domain protein"
/codon_start=1
/transl_table=11
/product="single-stranded nucleic acid binding R3H
domain-containing protein"
/protein_id="YP_001633765.1"
/db_xref="GI:163845721"
/db_xref="InterPro:IPR001374"
/db_xref="GeneID:5828046"
/translation="MKRIEISERTVAEAVELALAQLGRDRDEVAIEVLDPGENGDEAL
VRVTVVEDEEEAPSVEKVSEIAQRVLEDLLERMDIHAYVTAVISHATGPNGEPEATIT
LHVEGADEEAMGLLIGRRGETLRSLQFLLNLLVSRRVQKWPQLVVDVGNYRQRRQESL
ESLARRMAERVRQTGRPIMLEPMAAYERRIVHLALRNDKTIYTESSGEGENRKIVIYP
AKHS"
misc_feature 159230..159826
/locus_tag="Caur_0122"
/note="Predicted RNA-binding protein [General function
prediction only]; Region: Jag; COG1847"
/db_xref="CDD:32032"
misc_feature 159368..159634
/locus_tag="Caur_0122"
/note="jag_K homology RNA-binding domain. The KH domain is
found in proteins homologous to the Bacillus subtilis
protein Jag, which is associated with SpoIIIJ and is
necessary for the third stage of sporulation. The KH
motif is a beta-alpha-alpha-beta-beta...; Region: jag_KH;
cd02414"
/db_xref="CDD:48412"
misc_feature 159521..159532
/locus_tag="Caur_0122"
/note="G-X-X-G motif; other site"
/db_xref="CDD:48412"
misc_feature 159626..159826
/locus_tag="Caur_0122"
/note="R3H domain found in proteins homologous to Bacillus
subtilus Jag, which is associated with SpoIIIJ. SpoIIIJ is
necessary for the third stage of sporulation. The name of
the R3H domain comes from the characteristic spacing of
the most conserved arginine...; Region: R3H_jag; cd02644"
/db_xref="CDD:100073"
misc_feature order(159731..159733,159743..159745)
/locus_tag="Caur_0122"
/note="RxxxH motif; other site"
/db_xref="CDD:100073"
gene complement(160491..160874)
/locus_tag="Caur_0123"
/db_xref="GeneID:5828047"
CDS complement(160491..160874)
/locus_tag="Caur_0123"
/note="PFAM: globin;
KEGG: rrs:RoseRS_0783 globin"
/codon_start=1
/transl_table=11
/product="globin"
/protein_id="YP_001633766.1"
/db_xref="GI:163845722"
/db_xref="InterPro:IPR001486"
/db_xref="GeneID:5828047"
/translation="MSEPTIYEQIGGEATFRRIVDIFYARVEADPRLRHLFPADLEPG
KEHQRLFLMQYFGGPRTYSERRGHPRLRMRHAPFPIGPRERDAWLEHMLAALNEAGVP
EPARSVMENYFRHAAQAMMNRLGED"
misc_feature complement(160506..160862)
/locus_tag="Caur_0123"
/note="Truncated hemoglobins (trHbs) are a family of
oxygen-binding heme proteins found in cyanobacteria,
eubacteria, unicellular eukaryotes, and plants. The
truncated hemoglobins have a characteristic two-over-two
alpha helical folding pattern that is distinct...; Region:
Trunc_globin; cd00454"
/db_xref="CDD:29978"
misc_feature complement(order(160536..160538,160545..160547,
160578..160580,160587..160589,160599..160601,
160608..160610,160707..160709,160716..160721,
160806..160808,160815..160820,160827..160832,
160845..160847))
/locus_tag="Caur_0123"
/note="apolar tunnel; other site"
/db_xref="CDD:29978"
misc_feature complement(order(160515..160517,160527..160529,
160611..160613,160620..160622,160641..160643,
160650..160655,160665..160667,160671..160673,
160689..160691,160719..160724,160731..160733,
160743..160745,160764..160769,160803..160805))
/locus_tag="Caur_0123"
/note="heme binding site [chemical binding]; other site"
/db_xref="CDD:29978"
misc_feature complement(order(160575..160583,160593..160595,
160602..160604,160785..160790,160797..160799))
/locus_tag="Caur_0123"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29978"
gene 160995..161870
/locus_tag="Caur_0124"
/db_xref="GeneID:5828048"
CDS 160995..161870
/locus_tag="Caur_0124"
/note="KEGG: tte:TTE1925 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633767.1"
/db_xref="GI:163845723"
/db_xref="GeneID:5828048"
/translation="MSYETLTITSRRLRLTVLAAGGPRILALHLDNGPNLLAETPNAR
WETPWGEFVLLGGHRLWHAPEAFPRSYWPDLNGPAAEQIDHGVTLRSAVDPGYIAKSL
TVTLDPEQPRLHLQHTLTNHGLWPVELAPWAITQLAPGGKAILPLHNGQPPANPLLPN
RQIAFWPYTPLPDPRLAFCDDFILIDTAIAGPPAKVGAHSAAGWLAYLHQATLFIKRT
VYQPAAHYPDNNCNLEIYYDRGCTELETLAPLCRLDPGASVSHTEIWQVIPWTDDLDQ
SDLFTTLAQRAAEMV"
misc_feature 161049..161801
/locus_tag="Caur_0124"
/note="Domain of unknown function (DUF4380); Region:
DUF4380; pfam14315"
/db_xref="CDD:206483"
gene 162312..163511
/locus_tag="Caur_0125"
/db_xref="GeneID:5828049"
CDS 162312..163511
/locus_tag="Caur_0125"
/EC_number="3.6.3.16"
/note="KEGG: plt:Plut_1173 anion-transporting ATPase;
TIGRFAM: arsenite-activated ATPase ArsA;
PFAM: Anion-transporting ATPase"
/codon_start=1
/transl_table=11
/product="arsenite-activated ATPase ArsA"
/protein_id="YP_001633768.1"
/db_xref="GI:163845724"
/db_xref="InterPro:IPR003348"
/db_xref="GeneID:5828049"
/translation="MRTLIFTGKGGVGKTSVAAATALRAADRGLKTLVMSTDPAHSLA
DSLDLEGPLGPEPVRITKNLDALEVSIYHDIESNWGIVREHFAQLMAEQGVQGILADE
MSVLPGMEEAFPLIRIKKHKERGDYDLLVIDCAPTGETLRLLSAPETFKWAINMLRGA
ERYVIRPLIRPMSKITPGLNKMVAPPEVYDAVDEMFRQMEGVTATLANPRETSIRLVM
NPEKMVIKESQRALTYLSMYGMTVDMVVVNKILPLDQDSGYLNHWRDVQQRYLQDVEH
AFVPLPIRRVPYYPEEVVGLEKLRQMGDDIYGDMDPTAVLYDRAPLDIAKVGDKSYRV
KIRLPFADVSQLDLYQNGDELVIQIGDFRRVITLPTSLAGLEAGQAEMEGEWLIVPFM
APQMAQR"
misc_feature 162312..163235
/locus_tag="Caur_0125"
/note="Anion-transporting ATPase; Region: ArsA_ATPase;
pfam02374"
/db_xref="CDD:202225"
misc_feature 162321..163169
/locus_tag="Caur_0125"
/note="ArsA ATPase functionas as an efflux pump located on
the inner membrane of the cell. This ATP-driven oxyanion
pump catalyzes the extrusion of arsenite, antimonite and
arsenate. Maintenance of a low intracellular concentration
of oxyanion produces...; Region: ArsA; cd02035"
/db_xref="CDD:73298"
misc_feature 162333..162359
/locus_tag="Caur_0125"
/note="P loop; other site"
/db_xref="CDD:73298"
misc_feature order(162342..162344,162348..162359,162423..162425,
162708..162710)
/locus_tag="Caur_0125"
/note="Nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:73298"
misc_feature order(162423..162431,162708..162731)
/locus_tag="Caur_0125"
/note="DTAP/Switch II; other site"
/db_xref="CDD:73298"
misc_feature 162423..162431
/locus_tag="Caur_0125"
/note="Switch I; other site"
/db_xref="CDD:73298"
gene 163594..163836
/locus_tag="Caur_0126"
/db_xref="GeneID:5828050"
CDS 163594..163836
/locus_tag="Caur_0126"
/note="PFAM: bacteriochlorophyll C binding protein"
/codon_start=1
/transl_table=11
/product="bacteriochlorophyll C binding protein"
/protein_id="YP_001633769.1"
/db_xref="GI:163845725"
/db_xref="InterPro:IPR001470"
/db_xref="GeneID:5828050"
/translation="MATRGWFSESSAQVAQIGDIMFQGHWQWVSNALQATAAAVDNIN
RNAYPGVSRSGSGEGAFSSSPSNGFRPKRIRSRFNR"
misc_feature 163597..163833
/locus_tag="Caur_0126"
/note="Bacteriochlorophyll C binding protein; Region:
Bac_chlorC; pfam02043"
/db_xref="CDD:110989"
gene 163897..164985
/locus_tag="Caur_0127"
/db_xref="GeneID:5828051"
CDS 163897..164985
/locus_tag="Caur_0127"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633770.1"
/db_xref="GI:163845726"
/db_xref="InterPro:IPR002110"
/db_xref="GeneID:5828051"
/translation="MINLLYYSHTTVPAHLEEITRLDVLDPDEQVLVAIDGVLVDQQG
QRLSGPTLHDYCLITDLRVILWARDYGRHLCYAFPLHELTLIDGRGIDPIHGAVTMGF
SAPDTDDQIFTLTLVPQAYVPALMVLLRTAAETARSALAAGIDARQAAPDVMTALGAA
IYGSEDALRIDETPYRWPGGAARTPAAPNALFAIDPANLPPNQIFTAGRLARSAWDTL
RRTLREADLPFDLSPTSIRELTDAIRAVNDLVQTVANNPAAQQIALAFLNRQMGNQQS
TAPSPPVEPPTPEATPAPHRYHEIPLRRRATPSREPAMTQPTATASSPLNITDRREIP
LRRRTTPLHRTSLAALSGSGDADQDRTT"
gene 165028..166371
/locus_tag="Caur_0128"
/db_xref="GeneID:5828052"
CDS 165028..166371
/locus_tag="Caur_0128"
/note="KEGG: plt:Plut_0266 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633771.1"
/db_xref="GI:163845727"
/db_xref="GeneID:5828052"
/translation="MRPFLGVNVSMASVEEMQQRGLLEEGETLLALFDGTLLDEQRRR
IGGLALADFVALTDRRLILWARGFFNDTVDGFPWSDVDVVRAETWDPWHGRVSLALRI
PATPPRKRRVALGEVQEAGQPERVIINTLDYMPVEDVDVLAKMVAWVGDQVVAGVTGE
ELIKAFEAEFPAVERKPLPPFFLASEPAPPPMPEPAPQQPKKKPWWKFGAADKEEEAT
PASPGNLIAAYERQRSGSGVSPETPPAPVGPLPTLPEQPNMYEVSRSLRLMLEVPRGL
ARGMRRASEILSGATELINNMQDPRVRRNAMRGLYYAAAQQEAEGGPLAPVGPVVRAA
VRFAEPTEQQSAAEPPQRRIAVRAAVRQSSPAPAPEPTTTAPAATDNPATPANQPVRR
AISIRRSETPDSGQDGSVPVRRIVVNRTDRPATVSGSGTGITPETRNGHNDSDAE"
gene 166418..167641
/locus_tag="Caur_0129"
/db_xref="GeneID:5828053"
CDS 166418..167641
/locus_tag="Caur_0129"
/EC_number="3.6.3.16"
/note="PFAM: Anion-transporting ATPase;
KEGG: cch:Cag_1412 anion-transporting ATPase"
/codon_start=1
/transl_table=11
/product="arsenite-transporting ATPase"
/protein_id="YP_001633772.1"
/db_xref="GI:163845728"
/db_xref="InterPro:IPR003348"
/db_xref="GeneID:5828053"
/translation="MTRVIIYSGKGGTGKTTLSAATAVMLAQAGRRTLVLSSDPAHSL
ADVMGIAISRDRPTPLAPHLYGLEVDTIYEWRQNLGGFQQFVTATYSARGIERSTAAE
LANQPGLDEILALQRVMDEAQSGRWDAIVLDTAPTGNTLRLLAYPEMIIGGEAGKRLF
RVYRGIANVARPFRRDLPDDRFFEEVGKLLERMDQLANFLVSSNVSVRLVLNPERLPL
LETRRAYTFLSLYGLQLDAVLVNKILPHRTDLGPYFDYWVNLQQQYLAEIESSFAPTP
IFRTVLQGGEPIGVEALLHVGRLTFGEVDPGALLYDERPIWLEQWSDDGEPGQYDLCL
RLPFLDPGEAIEVSHSGPDLTIVVGRLERTIALPRVLYDCTLGDYRYEDGVLRLAFYE
ANVVRTANKQQVEAA"
misc_feature 166418..167377
/locus_tag="Caur_0129"
/note="Predicted ATPase involved in chromosome
partitioning [Cell division and chromosome partitioning];
Region: ArsA; COG0003"
/db_xref="CDD:30352"
misc_feature 166487..>166852
/locus_tag="Caur_0129"
/note="ArsA ATPase functionas as an efflux pump located on
the inner membrane of the cell. This ATP-driven oxyanion
pump catalyzes the extrusion of arsenite, antimonite and
arsenate. Maintenance of a low intracellular concentration
of oxyanion produces...; Region: ArsA; cd02035"
/db_xref="CDD:73298"
misc_feature order(166532..166540,166814..166837)
/locus_tag="Caur_0129"
/note="DTAP/Switch II; other site"
/db_xref="CDD:73298"
misc_feature 166532..166540
/locus_tag="Caur_0129"
/note="Switch I; other site"
/db_xref="CDD:73298"
misc_feature <167054..167254
/locus_tag="Caur_0129"
/note="ArsA ATPase functionas as an efflux pump located on
the inner membrane of the cell. This ATP-driven oxyanion
pump catalyzes the extrusion of arsenite, antimonite and
arsenate. Maintenance of a low intracellular concentration
of oxyanion produces...; Region: ArsA; cd02035"
/db_xref="CDD:73298"
gene 167713..168816
/locus_tag="Caur_0130"
/db_xref="GeneID:5828054"
CDS 167713..168816
/locus_tag="Caur_0130"
/note="PFAM: Anion-transporting ATPase;
KEGG: rca:Rcas_0926 ATPase involved in chromosome
partitioning-like protein"
/codon_start=1
/transl_table=11
/product="anion-transporting ATPase"
/protein_id="YP_001633773.1"
/db_xref="GI:163845729"
/db_xref="InterPro:IPR003348"
/db_xref="GeneID:5828054"
/translation="MRTLIFTAHHQLQQSAAALATACHAARRGYRTLLASSGPGHLIG
HLLHQSLGARPLELEPNLAAMEIHPHEEVARRWEQVRPSLRSGLVARLRDLGPDELPA
FPGIDAVAAMLVAERARQSGRFDLLILDGPAPDALIRALTLPDVLRWAVRLIFGLDRG
PGKSRASQEQAMIPAAILAPSATAPLQELRIELETQRARLETESGARVRMVVLPPELR
LPPLRSALTAFGLYGMASDEVIVNGSPDQVDDESRHDFSHETSRARPLLRIGQLDLTP
TDRDSWALRGAALYRDGDIFATEPPRPQSSERDMRLLIPFLDPKALDIAVASEEVVVQ
LGQMRRHVLLPGLVDGGRLRARVEGEQLRLWVE"
misc_feature 167791..>168174
/locus_tag="Caur_0130"
/note="ArsA ATPase functionas as an efflux pump located on
the inner membrane of the cell. This ATP-driven oxyanion
pump catalyzes the extrusion of arsenite, antimonite and
arsenate. Maintenance of a low intracellular concentration
of oxyanion produces...; Region: ArsA; cd02035"
/db_xref="CDD:73298"
misc_feature order(167824..167832,168100..168123)
/locus_tag="Caur_0130"
/note="DTAP/Switch II; other site"
/db_xref="CDD:73298"
misc_feature 167824..167832
/locus_tag="Caur_0130"
/note="Switch I; other site"
/db_xref="CDD:73298"
gene 168831..169838
/locus_tag="Caur_0131"
/db_xref="GeneID:5828055"
CDS 168831..169838
/locus_tag="Caur_0131"
/note="PFAM: alpha/beta hydrolase fold;
KEGG: pvi:Cvib_1124 alpha/beta hydrolase fold"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold-containing protein"
/protein_id="YP_001633774.1"
/db_xref="GI:163845730"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="InterPro:IPR003089"
/db_xref="GeneID:5828055"
/translation="MSVLAQPVPFERPPARPVDAPPTAKYVAYANEVATRLAGRLSGR
ERRRLEGERALLARARFIELNGVVHHYQDVGPSDGQPLVLIHGWDCSSFWWHHVVDPL
AQAGYRVISYDLKGHGFSDTDPRQNYTVAGFSADLQALIRALDLGAVHLAAFSLGAFV
GLHVAAHHPDMVRSLIFFNFSLLPYNKLASAFVPRLLDVVFNRVLRPIERRNLWWLPF
IYARLVMAQHTPSISDIRLGTLGLRYCDPAAVRVSATELSRPEILNAVAEQARMIRQP
LLLVAGANDPIMRPADGRKLVALTPNGSFLEVPKCGHLILFELPEQVIQIMRLFLKSV
R"
misc_feature 169038..>169193
/locus_tag="Caur_0131"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature 169074..169808
/locus_tag="Caur_0131"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:205026"
gene 169851..170732
/locus_tag="Caur_0132"
/db_xref="GeneID:5828103"
CDS 169851..170732
/locus_tag="Caur_0132"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633775.1"
/db_xref="GI:163845731"
/db_xref="GeneID:5828103"
/translation="MQLLLRSGGQQLIIDMERADDRPLTVGQYTYRPRRLAGKVRRLA
TKMWPDLPPTVLAERLTFEAMDTVRDTAWSDSGSFSPRSGSVVLLGRWDEDGSVGIAL
HELAHEMHLYHGGYDDSDGVVREAVAMLAEREAGLRRTFEREPYHSACQLVEQLESLS
AFNRLSFPKRWAEVISVTSMVGLADLVNYYLDRSERLGLARWLDRLTKNIDVRDQLLA
RLATTSLRYSLALRRVLIKKLVRCKPETPVEQLLYVLDSIATLDRRYPNDDLEQIINF
CFAPYVPQRRRLFAFGS"
gene 170748..171464
/locus_tag="Caur_0133"
/db_xref="GeneID:5828104"
CDS 170748..171464
/locus_tag="Caur_0133"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633776.1"
/db_xref="GI:163845732"
/db_xref="GeneID:5828104"
/translation="MNRFNEDNDTVRWLPGFVRRWFGLTDETPQRREAAGPGWMPGWL
QRFFGLTYEEPVRYTDEGTPSVSSRTTYTPPPRSYTPGTPSFTPTPRGFAPASYRPTS
GEGTPSTPTQRSLAGDELPTDIQPIGYLLRSYARGALPPQGLEAFTREVRTTTEKVFN
FYGHWLRFQTEELFRIGGDLCNAVINALPGEPAKPQNQTIRRIKVVADNGNGSSNATS
TAQTGSAETTTEPERSEDKE"
gene 171489..172154
/locus_tag="Caur_0134"
/db_xref="GeneID:5828105"
CDS 171489..172154
/locus_tag="Caur_0134"
/note="KEGG: tel:tlr1982 probable lipase"
/codon_start=1
/transl_table=11
/product="putative lipase"
/protein_id="YP_001633777.1"
/db_xref="GI:163845733"
/db_xref="GeneID:5828105"
/translation="MGGWLSSPADYFGMARILAAPPYNRIVYVVNFSRLDWLALRDPN
FGPALDALAATVQIALSETGADTIDLIGHSAGGRIARAYLADEPYQGVRYAGHKVVAS
LTTLGTAHATSEVWVKQFADWLEARYPGAAFPHIRYRAVAGRSVRGRRFGSPEEMIAY
RSYEVSFGNGNLIGDGIVPTAACYLAGADNLILEGARHAPYNAPATWYGARDVVPLWF
DAG"
misc_feature <171669..>171827
/locus_tag="Caur_0134"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene 172163..172876
/locus_tag="Caur_0135"
/db_xref="GeneID:5828106"
CDS 172163..172876
/locus_tag="Caur_0135"
/note="KEGG: tel:tlr1982 probable lipase"
/codon_start=1
/transl_table=11
/product="putative lipase"
/protein_id="YP_001633778.1"
/db_xref="GI:163845734"
/db_xref="GeneID:5828106"
/translation="MVRPLVIIGGYLTSPNDFSALAQALSQPPFDFRVFVTPIGRLRW
ALTRDWDFRPVLRIVRETVAQALHETGAETVTILAHSVGGTVARMYLGDQPYKGEIYG
GHRFVDHLIMLGTPHHSQEFWTRQTVGFTNRSYPGAYYRHIRYTSIIGRSIQANRKGR
WIERMAYNSYVMIDGPAGAQAWGDGITTLRCAALAGAEYLVVPGLHHSPIHGRPWYGD
PDGLREWQRVLMRSSPLVV"
misc_feature 172175..172804
/locus_tag="Caur_0135"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:205026"
misc_feature <172364..>172516
/locus_tag="Caur_0135"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene 172910..173410
/locus_tag="Caur_0136"
/db_xref="GeneID:5828107"
CDS 172910..173410
/locus_tag="Caur_0136"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633779.1"
/db_xref="GI:163845735"
/db_xref="GeneID:5828107"
/translation="MNSTHFDRIILYVMAAVSGVSLACYTAVLYLCRQEARGSQPTRS
TLRTRLANLAHALDWLMNLLIALVGIGRLFREEQFGGQHQPRWLKIYFMITGPLPTIG
MVGAMITGHRWEKTMHHHPHQRRLHRIFAWVGYFSWWLSFIPIFFQPWLNRMAARTND
STSVLS"
sig_peptide 172910..172981
/locus_tag="Caur_0136"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.907) with cleavage site probability 0.651 at
residue 24"
gene 173441..174505
/locus_tag="Caur_0137"
/db_xref="GeneID:5828108"
CDS 173441..174505
/locus_tag="Caur_0137"
/note="TIGRFAM: C-20 methyltransferase BchU;
PFAM: O-methyltransferase family 2;
KEGG: cte:CT0028 CrtF-related protein"
/codon_start=1
/transl_table=11
/product="C-20 methyltransferase BchU"
/protein_id="YP_001633780.1"
/db_xref="GI:163845736"
/db_xref="InterPro:IPR001077"
/db_xref="InterPro:IPR014088"
/db_xref="GeneID:5828108"
/translation="MTTVPSVDATKTNGTDLTQHDLFAATNRAYDMVFKGTVDFFVIK
AAKDLGLFDLLASAPRTLADLATLTETVPPRLEKFLITMEQIGLVTRQGDAWQLTPFA
DQFFADPERHRNMTMVPFVDYIADLIENYYLRLADVVRGKVDFTSIVPHPPRTREDSL
FYETLHRSNIQLFTELLIKRARLADVQTLIDVGGGIGDIAAALCQAFPQLKVTLINLP
SALDLVRENVAAKGLADRITPVAIDMYREPYPPGDAVLFSRILYPMNAQFCTMLLRKA
YDALPSGGRILILDMVISDPNHPNYDYLTHYLCAIGMGFSVLEFKDHAVYPDLLRQVG
FTDVTLDEGYEHVLYQAVKP"
misc_feature 173549..174466
/locus_tag="Caur_0137"
/note="C-20 methyltransferase BchU; Region:
C20_methyl_CrtF; TIGR02716"
/db_xref="CDD:131763"
misc_feature 173708..174331
/locus_tag="Caur_0137"
/note="O-methyltransferase; Region: Methyltransf_2;
pfam00891"
/db_xref="CDD:144476"
gene 174564..175481
/locus_tag="Caur_0138"
/db_xref="GeneID:5828109"
CDS 174564..175481
/locus_tag="Caur_0138"
/note="TIGRFAM: bacteriochlorophyll/chlorophyll
synthetase;
PFAM: UbiA prenyltransferase;
KEGG: cch:Cag_1538 bacteriochlorophyll a synthase"
/codon_start=1
/transl_table=11
/product="bacteriochlorophyll/chlorophyll synthetase"
/protein_id="YP_001633781.1"
/db_xref="GI:163845737"
/db_xref="InterPro:IPR000537"
/db_xref="InterPro:IPR006372"
/db_xref="GeneID:5828109"
/translation="MISTEQRVSLSRKIRAHIELADPVTWISPVLVCFCGALASGYER
GFDWTRPDHWWLMLLGALMTGPLGTGFSQSINDYFDRDLDAINDPQRPIPAGIISLNE
ARWNWIVLGAATLLVSLVFGNPLIVLFAVVGIVLSVIYSMPPIKLKKHFWLGPPAVGL
GYVSMSWMAGHLIFAPLTWQSVVVALINGGLAAGLLFLNDIKSVEGDRKLGLQSLTVA
IGVKRTLIVAYVTINSFEAMLMILALIWGQYWVAAFMFLALVAPIYNQIKLYQEPTQQ
NYVRYLLASNPFVALIQIISGFLVGGYFG"
misc_feature 174606..175466
/locus_tag="Caur_0138"
/note="bacteriochlorophyll/chlorophyll synthetase; Region:
chlor_syn_BchG; TIGR01476"
/db_xref="CDD:130541"
gene 175504..175794
/locus_tag="Caur_0139"
/db_xref="GeneID:5828110"
CDS 175504..175794
/locus_tag="Caur_0139"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633782.1"
/db_xref="GI:163845738"
/db_xref="GeneID:5828110"
/translation="MTESEGEVRVRSVPVRRNDSFVESAMEFGGGIVRLGFSIFTLPL
ALLPPESRQHMHNATKELMYAFASLPRDFAEIAGKSIEKWAEEGEEPKGEAK"
gene 175833..176270
/locus_tag="Caur_0140"
/db_xref="GeneID:5828111"
CDS 175833..176270
/locus_tag="Caur_0140"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633783.1"
/db_xref="GI:163845739"
/db_xref="GeneID:5828111"
/translation="MSNETTNERDGLFEMAAGFVGGATRIGLTVASVPLVLLPRNSRR
RVRRAMAEVAMAVVAFPKELANVSERVVDDIFAADPPQINLPSPQRVGEQVRSFTERL
ARAAEELGTSFSRAAGRAADAVEQGAAKVDEWVETPPKTPPAP"
gene 176465..177634
/locus_tag="Caur_0141"
/db_xref="GeneID:5828112"
CDS 176465..177634
/locus_tag="Caur_0141"
/note="PFAM: FAD-dependent pyridine nucleotide-disulphide
oxidoreductase;
KEGG: bcy:Bcer98_3646 FAD-dependent pyridine
nucleotide-disulphide oxidoreductase"
/codon_start=1
/transl_table=11
/product="FAD-dependent pyridine nucleotide-disulfide
oxidoreductase"
/protein_id="YP_001633784.1"
/db_xref="GI:163845740"
/db_xref="InterPro:IPR001100"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:5828112"
/translation="MRIVILGAGYAGLRTALDLARLRRAYGLEITIQVVDQNPYHQLV
QLLHLTATAGITDQKSIYQLDTLFRGREVERIEGRVEAIHPLERRVVLNTGQTLEYDR
LVLALGSETAFQVPGAREYTLPLRTFSDALKLRKHLIEQFTRAASITDPTELRITMTT
AIVGGGYTGCELAGELAAWADDLCRQTGAPRKEVRIALIEREDHLLPHLGTWASNEAV
RRLERLGVNIFLQTPVVQVEPQRLRFADGRLLRAGTIVWGAGVRAPALLAEAGFPTDR
LGRVLVDRYLRVQGHATVFAIGDCAAVPDGRGGTLPPTASYAMRQGEHLAEVLAAEAR
GEAPRAYEPVELGEVVSLGPNDAVGNPLGVPITGYPALMLKRGIEEYYRATIESA"
misc_feature 176465..177628
/locus_tag="Caur_0141"
/note="NADH dehydrogenase, FAD-containing subunit [Energy
production and conversion]; Region: Ndh; COG1252"
/db_xref="CDD:31444"
misc_feature 176945..177178
/locus_tag="Caur_0141"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
gene 177650..178105
/locus_tag="Caur_0142"
/db_xref="GeneID:5828113"
CDS 177650..178105
/locus_tag="Caur_0142"
/note="KEGG: ter:Tery_0501 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633785.1"
/db_xref="GI:163845741"
/db_xref="GeneID:5828113"
/translation="MIVQEQFVSIKAPPATVERYLTDPQLMMEWRSPLVVLDPIEGEL
MTLGSKHKLRLKSLALAGSTYTVTERDSNHILLTIDGLWRGQELWRWFADGDRTIVQN
RVEYEVPDPSLRVFVVGLGQIFASLDMRIQLDRLRMLIEGKGQPAAQAR"
misc_feature 177662..178060
/locus_tag="Caur_0142"
/note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
ligand-binding domain superfamily; Region: SRPBCC;
cd07812"
/db_xref="CDD:176854"
misc_feature order(177665..177667,177671..177673,177698..177706,
177710..177715,177758..177760,177776..177778,
177782..177784,177788..177790,177794..177796,
177842..177844,177848..177850,177854..177856,
177914..177919,177926..177928,177947..177949,
177953..177955,177959..177961,177965..177967,
178007..178021,178025..178027,178031..178033,
178040..178048,178055..178057)
/locus_tag="Caur_0142"
/note="hydrophobic ligand binding site; other site"
/db_xref="CDD:176854"
gene 178272..178556
/locus_tag="Caur_0143"
/db_xref="GeneID:5828114"
CDS 178272..178556
/locus_tag="Caur_0143"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633786.1"
/db_xref="GI:163845742"
/db_xref="GeneID:5828114"
/translation="MARQQRFSPRDEVYLTSTSFEVYMAAGGVFIGLFGLLFAISIKI
SFAWLVWPALFVSILAGYITLNRLEKRERKRKLAELEAEYAAKEQIAKGD"
gene 178643..179605
/locus_tag="Caur_0144"
/db_xref="GeneID:5828115"
CDS 178643..179605
/locus_tag="Caur_0144"
/note="PFAM: helix-turn-helix domain protein; peptidase
M23B;
KEGG: rrs:RoseRS_2287 peptidase M23B"
/codon_start=1
/transl_table=11
/product="peptidase M23B"
/protein_id="YP_001633787.1"
/db_xref="GI:163845743"
/db_xref="InterPro:IPR001387"
/db_xref="InterPro:IPR002886"
/db_xref="GeneID:5828115"
/translation="MQTLRSIRRTRDLTFVDLALLSGIPARAIAEAEYGLRRLSNHEV
EAIALVLGLSPTTLFPPFQQRSSSPNLTPLILTAGLATSLALSPLVMTEWQRAQQQLL
STTIHHVGEALNAPDRQPTPDIIRPLPTAPQAARSIPATPTADALAPLVAPLPPRTPT
PIPTPSFYLDEAGPHGCPVQPTTGQVVITQGYGVGTHAPAHVWGAVDLAVDGNGDGIA
EPGSSWYTPIVATHNGVVRVTLDSYPAGHHVWVMAPDGIWRTGYAHLAVVTVIDGQYV
QAGDVIGLMGNTGFASGPHLDYQVWRGDENIDPTTLVGCSTIKP"
misc_feature 178643..178816
/locus_tag="Caur_0144"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
sig_peptide 178643..178735
/locus_tag="Caur_0144"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.617) with cleavage site probability 0.512 at
residue 31"
misc_feature order(178655..178657,178667..178669,178742..178744)
/locus_tag="Caur_0144"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(178664..178666,178739..178741)
/locus_tag="Caur_0144"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(178685..178690,178721..178723,178730..178732,
178742..178747)
/locus_tag="Caur_0144"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
misc_feature <179318..179569
/locus_tag="Caur_0144"
/note="Membrane proteins related to metalloendopeptidases
[Cell envelope biogenesis, outer membrane]; Region: NlpD;
COG0739"
/db_xref="CDD:31082"
misc_feature 179318..179569
/locus_tag="Caur_0144"
/note="Peptidase family M23; Region: Peptidase_M23;
pfam01551"
/db_xref="CDD:201854"
gene complement(181900..182655)
/locus_tag="Caur_0145"
/db_xref="GeneID:5828116"
CDS complement(181900..182655)
/locus_tag="Caur_0145"
/note="PFAM: ABC-2 type transporter;
KEGG: mth:MTH1092 ABC-2 type transport system permease
protein"
/codon_start=1
/transl_table=11
/product="ABC-2 type transporter"
/protein_id="YP_001633788.1"
/db_xref="GI:163845744"
/db_xref="InterPro:IPR000412"
/db_xref="InterPro:IPR013525"
/db_xref="InterPro:IPR013526"
/db_xref="GeneID:5828116"
/translation="MYATYVIWTRHMRKFVQQTEELFGLALQSVLWVVLFGVGMRGMI
GAVGGNDYMSFILPGIIALSALGGAVGGGMVLLDERLRGIVKEYLAAPIPRLSILLGS
AASTATKALFQAALMLVVGLLMGARLSVNPIGWLGALALLAVFAIGFSGLALGVAAIS
RSIAGYHGMIFLFNLPLLFASNALYPLDVLPGWMRVIVLINPATYFIDAVRALAFGTA
ATLPLWLSGLILIGFAVLSMMFALTLFQRSLRA"
misc_feature complement(181921..182628)
/locus_tag="Caur_0145"
/note="ABC-2 type transporter; Region: ABC2_membrane;
cl11417"
/db_xref="CDD:213123"
misc_feature complement(181930..>182436)
/locus_tag="Caur_0145"
/note="ABC-2 family transporter protein; Region:
ABC2_membrane_3; pfam12698"
/db_xref="CDD:205027"
gene complement(182667..183614)
/locus_tag="Caur_0146"
/db_xref="GeneID:5824901"
CDS complement(182667..183614)
/locus_tag="Caur_0146"
/note="KEGG: mem:Memar_0243 daunorubicin resistance ABC
transporter ATPase subunit;
TIGRFAM: daunorubicin resistance ABC transporter ATPase
subunit;
PFAM: ABC transporter related;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="daunorubicin resistance ABC transporter ATPase
subunit"
/protein_id="YP_001633789.1"
/db_xref="GI:163845745"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005894"
/db_xref="GeneID:5824901"
/translation="MDTPAIETIDLVKRYGNLTALDHVNLQAPSGKIYALLGPNGAGK
TTLLSILTTLLPPTAGTARILGYDVSREAAEVRRRIGVTFQEMVLDPLLTGRETLDFH
GRLYRLPAAVRRQRIRDLVELVQLTDAIDRPVKSYSGGMKRRLELARGLMTDPQVLVL
DEPTQGLDPQNRVNIWQYVRDLNRQRGMTILLTTHAMDEAEALADLVGIIDHGRLIVE
GQPTDLIASLGSDVIRVRGQGDSHHLTSAICGIDGVQRVETDPTEGLILIYTDNGSRR
LPVVLSAVSGNGFAIEDVTLARPSLGDVFLHYTGTALRD"
misc_feature complement(182943..183599)
/locus_tag="Caur_0146"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(182685..183578)
/locus_tag="Caur_0146"
/note="daunorubicin resistance ABC transporter ATP-binding
subunit; Region: drrA; TIGR01188"
/db_xref="CDD:130256"
misc_feature complement(183480..183503)
/locus_tag="Caur_0146"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(183030..183032,183129..183134,
183360..183362,183477..183485,183489..183494))
/locus_tag="Caur_0146"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(183360..183371)
/locus_tag="Caur_0146"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(183177..183206)
/locus_tag="Caur_0146"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(183129..183146)
/locus_tag="Caur_0146"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(183111..183122)
/locus_tag="Caur_0146"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(183024..183044)
/locus_tag="Caur_0146"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
misc_feature complement(182694..182960)
/locus_tag="Caur_0146"
/note="Domain of unknown function (DUF4162); Region:
DUF4162; pfam13732"
/db_xref="CDD:205907"
gene 183964..184383
/locus_tag="Caur_0147"
/db_xref="GeneID:5824902"
CDS 183964..184383
/locus_tag="Caur_0147"
/note="KEGG: rrs:RoseRS_3147 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633790.1"
/db_xref="GI:163845746"
/db_xref="GeneID:5824902"
/translation="MQQQPIRIEQRSGPNILIRVIYFFVFGLWFSGIWAAIGWILCVT
IVGLPVGLWMLNRMPQVVTLAPQRNNLVIVGNQVYQSSVPQRPFLIRALWFVLVGWWL
SALWLLVAWALSVSIIGMVFAFWMFDRVPAIITLARR"
gene 185401..186291
/locus_tag="Caur_0148"
/db_xref="GeneID:5824903"
CDS 185401..186291
/locus_tag="Caur_0148"
/note="KEGG: fno:Fnod_0510 protein of unknown function
DUF450"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633791.1"
/db_xref="GI:163845747"
/db_xref="GeneID:5824903"
/translation="MIFIVVKKAGMSDWADRQLFEYAFLQGIPMVIFTNGQEWSFYLT
NAQGSYDERRVYKLDLLESDIEESIYRLERYLQYDWVCSGEALEATLSDYQNVARTRE
IEAALPKAWKSLLEEPDSLLLELLADKVEDLCGYKPDLDVCSRFITTVMRNHVDVPPQ
YPTLPRTRNPLPAERIETDDRVRAGSECFIMFEGKTYKPGSAIRTMLKLFQRLAEADP
GFLDRFAAMKHGSKRKYIARNRLELYPDRPDLAKQCSVEIIPGWWMGKNFSKRDIKHI
IEMALGIISPTLRAKIQYEL"
gene 186610..188460
/locus_tag="Caur_0149"
/db_xref="GeneID:5824904"
CDS 186610..188460
/locus_tag="Caur_0149"
/note="KEGG: rrs:RoseRS_3857 amino acid
permease-associated region"
/codon_start=1
/transl_table=11
/product="amino acid permease-associated protein"
/protein_id="YP_001633792.1"
/db_xref="GI:163845748"
/db_xref="GeneID:5824904"
/translation="MFAQLKRILVGRPIATEHQHHERLNKATALAVFSSDALSSVSYA
TEAILTILVLGGSVALGLSLPIAAAIAGLLLIVGFSYRQTIHAYPQGGGGYIVTRDNL
GDLPGLVAAGALLIDYVLTVAVSISAGVAAITSLATNWGFPTLRDHAVEIALVCILIV
TIANLRGAKESGFIFSIPTYAFISGILSMIVFGIAHDLMFGADPVVHSIDPDIPPTGE
VLSLWLILRAFAAGCTALTGIEAISDGVQAFKPPEARNAAITLTLMISLLVTMFLGIT
WLAYTHQAVPNEFTHETIVSQIARTIFGVGPLYVFIQIATALILVLAANTAFADFPRL
ASFLSRDRFLPRQFSSRGDRLVFSNGILVLGLCSAVLVVIFQANEIAMLPLYAVGVFT
SFTLSQSGMVRRHFRRKQPGWHYSAMINGIGATLTGIVLVILMVTKFVHGAWMVITAI
PILVMVFRAINQHYQRVAEQLSLSGAILPPELRRHTAIVLVSGIHRGVLPALQYARSI
APDNVTAVYVDLDPEATAKLRQRWQNWGCDIPLVVLESPYRSLINPILRYIEEVESRY
GDDVITVILPEFVPARWWEHLLHNQTGLLIKTALRLRGTVVTSVPYRLAR"
misc_feature 186868..187980
/locus_tag="Caur_0149"
/note="Amino acid permease; Region: AA_permease_2;
pfam13520"
/db_xref="CDD:205698"
gene complement(188477..189307)
/locus_tag="Caur_0150"
/db_xref="GeneID:5824905"
CDS complement(188477..189307)
/locus_tag="Caur_0150"
/note="PFAM: PfkB domain protein;
KEGG: rrs:RoseRS_3963 PfkB domain protein"
/codon_start=1
/transl_table=11
/product="ribokinase-like domain-containing protein"
/protein_id="YP_001633793.1"
/db_xref="GI:163845749"
/db_xref="InterPro:IPR011611"
/db_xref="GeneID:5824905"
/translation="MIEFVAIGHVTRDLLPQQTTAPGGTARFAALLAQRLGLRAAIVT
ASVEPAPPGVAWISLPTTFSSTFENRYTPAGRQQWLHAIAPSIPVTALPAAWRTAPIV
LLGPVLHECSPDLAGAFPGALIGATAQGWLRDWNTDLPTPIRPRRWRPTPAELRHLHV
LTLSSEDVAGDDELAAYYARLVPIGIVTHGAAGATLFIHGKPHHIPAFPAQESDPTGA
GDVFTTAFLIRLWETGDPVGAAHFAAAAAACVVEGVGDMALPDRVQIAQRMARVPDHG
"
misc_feature complement(188552..189301)
/locus_tag="Caur_0150"
/note="ribokinase/pfkB superfamily: Kinases that accept a
wide variety of substrates, including carbohydrates and
aromatic small molecules, all are phosphorylated at a
hydroxyl group. The superfamily includes ribokinase,
fructokinase, ketohexokinase; Region:
ribokinase_pfkB_like; cl00192"
/db_xref="CDD:212177"
misc_feature complement(order(188648..188650,188657..188659,
189224..189226))
/locus_tag="Caur_0150"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73186"
misc_feature complement(188489..>188824)
/locus_tag="Caur_0150"
/note="Sugar kinases, ribokinase family [Carbohydrate
transport and metabolism]; Region: RbsK; COG0524"
/db_xref="CDD:30870"
misc_feature complement(order(188642..188644,188651..188656,
188663..188665,188744..188746,188816..188818))
/locus_tag="Caur_0150"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73186"
gene complement(190653..191549)
/locus_tag="Caur_0151"
/db_xref="GeneID:5824906"
CDS complement(190653..191549)
/locus_tag="Caur_0151"
/note="PFAM: alpha/beta hydrolase fold;
KEGG: cph:Cpha266_1941 alpha/beta hydrolase fold"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold-containing protein"
/protein_id="YP_001633794.1"
/db_xref="GI:163845750"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR003089"
/db_xref="GeneID:5824906"
/translation="MSTPTEINTTRKFEIREEYRSGPDGLMRVWMSSPVQGLPVLLIH
GYGALIEHWRPVMRAIAGEQTLYALDLYYFGYSARPAGRPSRERWAAQAAALIRNTIG
RPAVVVGHSMGGVVSAQLARAYPDLVHALVLVNSSGAQLQARPLSTFDRFMLDAIGSP
LIGEALAGVFGNRWGVRQGLLSAYHRKECVTPELVELFSGPLRRYGAGSYLKVSREFA
NLVLDLTPGEIKQPTLLIWGAEDRSIPPAHAEIIRQRMIPHAEIKIIPDSGHCPFDET
PAAFLDILLPWLRKVGEQTVVA"
misc_feature complement(190701..191432)
/locus_tag="Caur_0151"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:205026"
gene complement(191655..192728)
/locus_tag="Caur_0152"
/db_xref="GeneID:5824907"
CDS complement(191655..192728)
/locus_tag="Caur_0152"
/note="KEGG: rca:Rcas_0051 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633795.1"
/db_xref="GI:163845751"
/db_xref="GeneID:5824907"
/translation="MKTVEPPVSPQRPPEYPLRRRLLGIMLIIGGLGWLLFELVSRGS
IAGFDLQLARENSAQTLPVQRFAVSRVEVTGVNDQVTLSATDGEEVILRGERRGFGWA
ANAAAAAAAQITIEVEQRGDTLFVHVRRQPQIMWYFGRDPYASLELSLPRDVTFNVEL
VSGDVTLRQIEASGTITTVSGDVVADRTSGQLTVNTTGGDIELRDHRGGLKVVTIGGD
TDVNGQFTDLDIQAIDGDVTLQGSFNTAVIGTVSGRVAVEATEASRLTISTTSGDVRF
TGQPAAERQEIETIAGNVELVLREPLDTQMTFTTVSGRINIPSELSALSANSRSFTAT
FGQGRTVLKTNTTSGDITLRLYK"
misc_feature complement(191667..>192278)
/locus_tag="Caur_0152"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG3595"
/db_xref="CDD:33395"
misc_feature complement(191898..192167)
/locus_tag="Caur_0152"
/note="Domain of unknown function (DUF4098); Region:
DUF4098; pfam13345"
/db_xref="CDD:205525"
gene complement(192841..193362)
/locus_tag="Caur_0153"
/db_xref="GeneID:5824908"
CDS complement(192841..193362)
/locus_tag="Caur_0153"
/note="KEGG: sfu:Sfum_3916 dual specificity protein
phosphatase"
/codon_start=1
/transl_table=11
/product="dual specificity protein phosphatase"
/protein_id="YP_001633796.1"
/db_xref="GI:163845752"
/db_xref="InterPro:IPR000387"
/db_xref="GeneID:5824908"
/translation="MLPHPNAYLVTERFIAGEYPFPTAADIQRLAWYQAAGITCFIDL
TTPGEAWSYAPALPSPMHHQRFSIPDFGLPATPAQMQAILAAIDEQLNRGATVYLHCL
GGVGRTGMTVGCWLVRHGFSGDEALATVARRWQTVAKAAMHPQSPETPDQRAYVLNWP
TLQLSLSVRRRME"
misc_feature complement(192964..193359)
/locus_tag="Caur_0153"
/note="Protein tyrosine phosphatases (PTP) catalyze the
dephosphorylation of phosphotyrosine peptides; they
regulate phosphotyrosine levels in signal transduction
pathways. The depth of the active site cleft renders the
enzyme specific for phosphorylated Tyr; Region: PTPc;
cl00053"
/db_xref="CDD:213076"
misc_feature complement(order(193039..193044,193051..193053,
193060..193065,193153..193155))
/locus_tag="Caur_0153"
/note="active site"
/db_xref="CDD:28929"
gene 193471..193965
/locus_tag="Caur_0154"
/db_xref="GeneID:5824909"
CDS 193471..193965
/locus_tag="Caur_0154"
/note="KEGG: rrs:RoseRS_3314 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633797.1"
/db_xref="GI:163845753"
/db_xref="GeneID:5824909"
/translation="MPILIDGHNLIGQMPDIELSDPDDEAKLVAKLRRYVAKKRGRKI
VVVFDGGVYGHPQNLNGFGVETRFVKPPQNADHELIRQIRAIRRCDEWLVVSSDRAVV
GEAQARGIRVMSAQEFARRLQMLDQPRINARDKRGDRPLSKAEVEEWLRFFGVDEDED
TLYY"
misc_feature 193477..193809
/locus_tag="Caur_0154"
/note="LabA_like proteins; Region: LabA_like; cd06167"
/db_xref="CDD:199895"
misc_feature order(193486..193488,193495..193497,193696..193698,
193756..193758,193762..193764)
/locus_tag="Caur_0154"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:199895"
gene 193970..194833
/locus_tag="Caur_0155"
/db_xref="GeneID:5824910"
CDS 193970..194833
/locus_tag="Caur_0155"
/note="PFAM: Methyltransferase type 11; Methyltransferase
type 12;
KEGG: rxy:Rxyl_2574 methyltransferase type 12"
/codon_start=1
/transl_table=11
/product="type 12 methyltransferase"
/protein_id="YP_001633798.1"
/db_xref="GI:163845754"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:5824910"
/translation="MPDPVTEQNRRSWNAVVPAHVSHRADEAAFLRQGGSTLFPEEVA
LLGDVRGCRLLHLLCNTGADSLSLAARGAIVTGVDLSDAAIAHARALSVASGIPATFV
QADVYEYLAAAAAANTRFERIYAGYGVICWLRDLTAFANGIAHLLAPGGRFVLMEFHP
ASNMFNADWQLAYDYPQGGQTLTLPGVGDYVGAADGGLSPSGFLPGVRDFVNPEPCTL
YRWGVGEVVTALVQAGLRLHVLREYCYVNGERPFTRMVATPERRMYPPADVPAIPLMY
GLAVEKDTSDG"
misc_feature 194120..>194467
/locus_tag="Caur_0155"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:206018"
misc_feature 194126..194437
/locus_tag="Caur_0155"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(194138..194158,194204..194209,194279..194287,
194345..194347)
/locus_tag="Caur_0155"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 194826..195209
/locus_tag="Caur_0156"
/db_xref="GeneID:5824911"
CDS 194826..195209
/locus_tag="Caur_0156"
/note="TIGRFAM: dihydroneopterin aldolase;
KEGG: rxy:Rxyl_2579 dihydroneopterin aldolase"
/codon_start=1
/transl_table=11
/product="dihydroneopterin aldolase"
/protein_id="YP_001633799.1"
/db_xref="GI:163845755"
/db_xref="InterPro:IPR006156"
/db_xref="InterPro:IPR006157"
/db_xref="GeneID:5824911"
/translation="MDEWGIGHDRIILSGMQFIGYHGTRPEENRLGQRFVVDVAVQLD
LQAAGVSDDLSQTVDYSQIHDRVREIVCGPPLKLTEAVAERIAAAVLHDHPTIVAVAV
RVTKPGVRLGETILAGSMVEIVRRR"
misc_feature 194847..195203
/locus_tag="Caur_0156"
/note="Dihydroneopterin aldolase (DHNA) and
7,8-dihydroneopterin triphosphate epimerase domain
(DHNTPE); these enzymes have been designated folB and
folX, respectively. Folate derivatives are essential
cofactors in the biosynthesis of purines, pyrimidines,
and...; Region: DHNA_DHNTPE; cd00534"
/db_xref="CDD:29762"
misc_feature order(194850..194882,194898..194924,195147..195152,
195165..195167,195171..195194)
/locus_tag="Caur_0156"
/note="homooctamer interface [polypeptide binding]; other
site"
/db_xref="CDD:29762"
misc_feature order(194892..194900,194907..194909,195054..195065,
195141..195143,195186..195188)
/locus_tag="Caur_0156"
/note="active site"
/db_xref="CDD:29762"
gene 195206..195871
/locus_tag="Caur_0157"
/db_xref="GeneID:5824912"
CDS 195206..195871
/locus_tag="Caur_0157"
/EC_number="1.1.1.193"
/note="PFAM: bifunctional deaminase-reductase domain
protein;
KEGG: rxy:Rxyl_2578 riboflavin-specific deaminase-like
protein"
/codon_start=1
/transl_table=11
/product="5-amino-6-(5-phosphoribosylamino)uracil
reductase"
/protein_id="YP_001633800.1"
/db_xref="GI:163845756"
/db_xref="InterPro:IPR002734"
/db_xref="InterPro:IPR011549"
/db_xref="GeneID:5824912"
/translation="MMRPRVTLCFAQTLDGRVAAVDGSSQWISGPESLRFCHHLRANS
DAIMVGVGTVLRDDPRLTTRLVAGPDPLRVIVDTHLRTPTTAAVIRDGAGTGTLLACT
AAAPLERRIALQECGATVLTMPEAAGGGVDLAALLTALGERGVASVMVEGGARLITSL
LRANLVDALAVTIAPIILGSGPSAIGDLGILTLNQALRLTNVTWTTYGADVVIEGDLA
HHQ"
misc_feature 195206..195847
/locus_tag="Caur_0157"
/note="Pyrimidine reductase, riboflavin biosynthesis
[Coenzyme metabolism]; Region: RibD; COG1985"
/db_xref="CDD:32168"
gene 195897..196919
/locus_tag="Caur_0158"
/db_xref="GeneID:5824913"
CDS 195897..196919
/locus_tag="Caur_0158"
/note="PFAM: Alcohol dehydrogenase zinc-binding domain
protein;
KEGG: rxy:Rxyl_2577 alcohol dehydrogenase, zinc-binding
protein"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase"
/protein_id="YP_001633801.1"
/db_xref="GI:163845757"
/db_xref="InterPro:IPR013149"
/db_xref="GeneID:5824913"
/translation="MKPLPAQAIWFTAPHTVSIREEIAPPPAYGDVRIAAIASLISHG
TERLVYRGEVDPTLALDLPTLQGSFAFPIKYGYAIAGRVIDIGPGVEQFQIGDPVAAL
HPHQTIFTLPAHLVKRLPDTLDPALGGFYANVETALTICHDAAPRLGETVVVLGQGVV
GLLVTQLLQRTGAQVIAVEPDAHRRALATQFGATTLAQADPATIAELTDGRGADIVVE
VSGSPAALQQAIELTATEGLVVVASWYGQKPAPLILGGHFHRGRVRLRSSQVGRLAPE
TLPRWDYARRSATVMNLLPRLCLNELISHRIPFVQAAAAYDLLDQAPPGLVQVMLTYA
DYAPQT"
misc_feature 195915..196823
/locus_tag="Caur_0158"
/note="Threonine dehydrogenase and related Zn-dependent
dehydrogenases [Amino acid transport and metabolism /
General function prediction only]; Region: Tdh; COG1063"
/db_xref="CDD:31263"
misc_feature 195945..>196202
/locus_tag="Caur_0158"
/note="Medium chain reductase/dehydrogenase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR; cl16912"
/db_xref="CDD:211475"
misc_feature 196098..196823
/locus_tag="Caur_0158"
/note="2-desacetyl-2-hydroxyethyl bacteriochlorophyllide
and other MDR family members; Region:
2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_;
cd08255"
/db_xref="CDD:176217"
misc_feature order(196101..196103,196290..196292,196302..196304,
196362..196379,196431..196436,196446..196448,
196491..196493,196551..196556,196560..196562,
196620..196625,196701..196709)
/locus_tag="Caur_0158"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176217"
gene 197111..197491
/locus_tag="Caur_0159"
/db_xref="GeneID:5824914"
CDS 197111..197491
/locus_tag="Caur_0159"
/note="PFAM: 6-pyruvoyl tetrahydropterin synthase and
hypothetical protein;
KEGG: rxy:Rxyl_2576 6-pyruvoyl tetrahydropterin synthase
and hypothetical protein"
/codon_start=1
/transl_table=11
/product="putative 6-pyruvoyl tetrahydropterin synthase"
/protein_id="YP_001633802.1"
/db_xref="GI:163845758"
/db_xref="InterPro:IPR007115"
/db_xref="GeneID:5824914"
/translation="MYEVGVIAQFEAAHRLEGNFGPATRMHGHTYRLEAIVSGERLQA
DGTLFDITRLQEAVNAIVADLHYRDLGTVAGLENVNTTAENVARYCWDRIAAAIRGVG
LMTLTVRIWENPQAFASYQSRLEG"
misc_feature 197117..197470
/locus_tag="Caur_0159"
/note="6-pyruvoyl tetrahydropterin synthase; Region: PTPS;
pfam01242"
/db_xref="CDD:201680"
misc_feature order(197189..197191,197195..197197,197444..197446,
197462..197464)
/locus_tag="Caur_0159"
/note="active site"
/db_xref="CDD:29764"
gene 197496..198545
/locus_tag="Caur_0160"
/db_xref="GeneID:5824734"
CDS 197496..198545
/locus_tag="Caur_0160"
/note="PFAM: glycosyl transferase group 1;
KEGG: rxy:Rxyl_2575 glycosyl transferase, group 1"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_001633803.1"
/db_xref="GI:163845759"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:5824734"
/translation="MALRIAFLTVGDPQRRTGGYLYHREVFRCWQARNQPVEEIVLGP
ADVAGQIAASNRAGQLVEAGRYDVIVVDALARAVVAPWLAHWQRLCPLVTLVHELPTV
AGASDPREYEWEQMLLRADALVAVSDDGANTLIARGVEAARIHIASGGCDRLLSRMPV
GKAREELVIAVAQWIPRKNLAHLVRVWGQVAEHPWRLELIGESDADPVYAGEVWQAIQ
HCPANVIVRGVLADDELAERYARASLFALPSRFEGYGLVFAEALACGLPVIAGAVGPV
PALVGAGGMLVHPDDEQALSVALRTVMRDAHLRQHLSTAARQRASTLPRWQDTAQHLL
CAIEWAYAQRHRVST"
misc_feature 197535..198497
/locus_tag="Caur_0160"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region:
Glycosyltransferase_GTB_type; cl10013"
/db_xref="CDD:212618"
misc_feature <197715..198497
/locus_tag="Caur_0160"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
gene 198653..199771
/locus_tag="Caur_0161"
/db_xref="GeneID:5824735"
CDS 198653..199771
/locus_tag="Caur_0161"
/note="KEGG: rca:Rcas_4165 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633804.1"
/db_xref="GI:163845760"
/db_xref="GeneID:5824735"
/translation="MTGKKAILSLITTALVLLLTACGGGATSSSQPTPTTEEARPTRT
PRPAGNVTSPTTAPTTAPTTDTTVEQAPVLSTNADLTALGNVQVEMKLEGTSQESGQE
AEPFNLVMQQIILANGDRSLTMESTSPESGLVRIISVQVGGQVYQYVEDSNQPYCMAM
GNFDLFSGSMLTPDALIGSIPEAQLVERGVQVNGFTTDRYTFTINEQTPNYQGEAKGE
IWAAQDPAVVVRHIGEFTGTITGVTTEEGGTPLPGQLGNIRWEYNVTQLDANTNITLP
ETCAQQQAAGAEIPLPANISNRVQMGDLISFETTESPDNIVSFYQTEMVAQGWQAGEV
SQYGSDYQLTFSKDGRTATILVSVIDNKTSVIIMLASS"
sig_peptide 198653..198745
/locus_tag="Caur_0161"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.588 at
residue 31"
gene 200038..200616
/locus_tag="Caur_0162"
/db_xref="GeneID:5824736"
CDS 200038..200616
/locus_tag="Caur_0162"
/note="KEGG: ret:RHE_CH02020 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633805.1"
/db_xref="GI:163845761"
/db_xref="GeneID:5824736"
/translation="MDTTLKQGTLSVWYDEKGYGFIVDPQEERTFVHITAFGRIPRRP
VVGDTIFYTTTIDRDGKIRADYAWIEGLPAPRRRSYVHQHRKKGQPWSLTDVVLLLTV
IVLFFVAGGLFTVAFAGDTVTTTVAQIFAKRPGPPECVIKGNISIETGEKIYHLPGMR
DYDSTRIREEYGERWFCTEQEAIEAGWRRAGR"
misc_feature 200053..200220
/locus_tag="Caur_0162"
/note="Cold-Shock Protein (CSP) contains an S1-like
cold-shock domain (CSD) that is found in eukaryotes,
prokaryotes, and archaea. CSP's include the major
cold-shock proteins CspA and CspB in bacteria and the
eukaryotic gene regulatory factor Y-box protein; Region:
CSP_CDS; cd04458"
/db_xref="CDD:88424"
misc_feature order(200071..200073,200098..200100,200128..200130,
200212..200214)
/locus_tag="Caur_0162"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:88424"
misc_feature order(200089..200109,200125..200136)
/locus_tag="Caur_0162"
/note="RNA-binding motif; other site"
/db_xref="CDD:88424"
gene 201720..203462
/locus_tag="Caur_0163"
/db_xref="GeneID:5824737"
CDS 201720..203462
/locus_tag="Caur_0163"
/note="TIGRFAM: acetolactate synthase, large subunit,
biosynthetic type;
PFAM: thiamine pyrophosphate protein domain protein
TPP-binding; thiamine pyrophosphate protein central
region; thiamine pyrophosphate protein TPP binding domain
protein;
KEGG: rca:Rcas_1557 acetolactate synthase, large subunit,
biosynthetic type"
/codon_start=1
/transl_table=11
/product="acetolactate synthase large subunit"
/protein_id="YP_001633806.1"
/db_xref="GI:163845762"
/db_xref="InterPro:IPR000399"
/db_xref="InterPro:IPR011766"
/db_xref="InterPro:IPR012000"
/db_xref="InterPro:IPR012001"
/db_xref="InterPro:IPR012846"
/db_xref="GeneID:5824737"
/translation="MTKPLTGAQIMCEALIREGVEVMFGIPGGAIMPFYYAMWDYRDR
LRHVLCRHEQGAGHAAEGYARATGKIGVCIGTSGPGATNLVTPIADAMMDSTPLLAIT
GQVGSHVLGKDAFQETDITGITMPITKHNYLVKNVDELAYVFKEAIYIATTGRPGPVL
IDITKDAMQKTTVPNWDIKLNLPGYKPTYHGNRRQIREAIKLLISAKKPLIIAGHGII
MAGAHRELQEFAERLRIPVITTLHGIGAIPENHPLSIGMPGMHGWVHVNRAIQECDVL
FNIGGRFDDRVTGKASTFAPNARIIHVDIDPSEIGKNVRVDVPIVGDARLVLQAFLED
LPPPSELADLHTHASDWMEHIREMQDKHQGKQQYKNRAAMVNMALPPHDVYEALSRTL
NARGNYRVVTDVGQHQMWAAQLIDWNHGPRTHITSGGAGTMGFAVPAAMGVAIACPND
TVWAIVGDGGFQMTNQEMATIVQEGLKNVKIAVINNGYLGMVRQWQELFEHKRYSGTP
LSGPDFAKLAEAYGWKGLTVERSEDVQDAIDEAHATDGPVLIDFRVEREVNVFPMVPQ
NKSIGEMILSESQA"
misc_feature 201720..203426
/locus_tag="Caur_0163"
/note="acetolactate synthase 1 catalytic subunit;
Validated; Region: PRK07789"
/db_xref="CDD:181118"
misc_feature 201744..202208
/locus_tag="Caur_0163"
/note="Pyrimidine (PYR) binding domain of POX and related
proteins; Region: TPP_PYR_POX_like; cd07035"
/db_xref="CDD:132918"
misc_feature order(201783..201785,201798..201803,201813..201815,
201825..201827,201855..201875,201882..201884,
201891..201896,201903..201908,201912..201920,
201954..201956,201975..201977,201987..201989,
201996..202001)
/locus_tag="Caur_0163"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132918"
misc_feature order(201798..201806,201813..201815,201825..201827,
201858..201860,201864..201875,201879..201881,
201954..201956,201963..201968,201972..201977,
201984..201986,202086..202088,202095..202097)
/locus_tag="Caur_0163"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132918"
misc_feature order(201798..201800,201876..201878,201954..201956,
201966..201968)
/locus_tag="Caur_0163"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132918"
misc_feature 202305..202709
/locus_tag="Caur_0163"
/note="Thiamine pyrophosphate enzyme, central domain;
Region: TPP_enzyme_M; pfam00205"
/db_xref="CDD:201080"
misc_feature 202854..203414
/locus_tag="Caur_0163"
/note="Thiamine pyrophosphate (TPP) family,
Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding
module; composed of proteins similar to the large
catalytic subunit of AHAS. AHAS catalyzes the condensation
of two molecules of pyruvate to give the...; Region:
TPP_AHAS; cd02015"
/db_xref="CDD:48178"
misc_feature order(202929..202940,203010..203012,203016..203018,
203091..203099,203106..203108,203175..203177)
/locus_tag="Caur_0163"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:48178"
misc_feature order(203001..203003,203010..203012,203016..203018,
203103..203108,203112..203117,203136..203138,
203253..203258,203268..203270,203277..203279)
/locus_tag="Caur_0163"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48178"
gene 203501..204040
/locus_tag="Caur_0164"
/db_xref="GeneID:5824738"
CDS 203501..204040
/locus_tag="Caur_0164"
/note="TIGRFAM: acetolactate synthase, small subunit;
PFAM: amino acid-binding ACT domain protein;
KEGG: rrs:RoseRS_1967 acetolactate synthase, small
subunit"
/codon_start=1
/transl_table=11
/product="acetolactate synthase small subunit"
/protein_id="YP_001633807.1"
/db_xref="GI:163845763"
/db_xref="InterPro:IPR002912"
/db_xref="InterPro:IPR004789"
/db_xref="GeneID:5824738"
/translation="MKKHTIVALVQDRPGVLSRVTGLVRRRGYNIESLAVGHSETPGV
SRLTLVVESEDVEQVVKQLYRLIEVIKVSDVTDDPTVESEMTMIKLHAPPAVRHEIIS
MCSVFGARIVDVGSNTMIVEMTGTPGKVENFIEVVRPYGIKEMMRTGRIAMVRGARGH
NAGEYVEPATNGASVPVLN"
misc_feature 203507..203977
/locus_tag="Caur_0164"
/note="acetolactate synthase 3 regulatory subunit;
Reviewed; Region: ilvH; PRK11895"
/db_xref="CDD:183365"
misc_feature 203510..203719
/locus_tag="Caur_0164"
/note="N-terminal ACT domain of the Escherichia coli
IlvH-like regulatory subunit of acetohydroxyacid synthase
(AHAS); Region: ACT_AHAS; cd04878"
/db_xref="CDD:153150"
misc_feature order(203528..203530,203534..203536,203549..203551,
203588..203593,203606..203608,203633..203635)
/locus_tag="Caur_0164"
/note="putative valine binding site [chemical binding];
other site"
/db_xref="CDD:153150"
misc_feature order(203540..203545,203552..203554,203573..203575,
203582..203584,203594..203608,203636..203638)
/locus_tag="Caur_0164"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153150"
misc_feature 203744..203968
/locus_tag="Caur_0164"
/note="Small subunit of acetolactate synthase; Region:
ALS_ss_C; pfam10369"
/db_xref="CDD:204463"
gene 204138..205160
/locus_tag="Caur_0165"
/db_xref="GeneID:5824739"
CDS 204138..205160
/locus_tag="Caur_0165"
/EC_number="1.1.1.86"
/note="catalyzes the formation of
(R)-2,3-dihydroxy-3-methylbutanoate from
(S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and
isoleucine biosynthesis"
/codon_start=1
/transl_table=11
/product="ketol-acid reductoisomerase"
/protein_id="YP_001633808.1"
/db_xref="GI:163845764"
/db_xref="InterPro:IPR000506"
/db_xref="InterPro:IPR013023"
/db_xref="InterPro:IPR013116"
/db_xref="GeneID:5824739"
/translation="MAELYYDNQADLNRLKNKPIAIIGFGSQGHAHARNLADSGLDVR
VGLYPGSKSWAKVEAAGLKVMTVAEAAREAQIVMILTPDIGQADLYREHIAPAMEPGK
TLMFAHGFNIRFGQIIPPQGIDVSMVAPKAPGHRVREVFVQGGGVPALIAVEQDATGG
AFEDALAYAKGLGCTRAGVLRTTFAEETETDLFGEQVVLCGGVSALVKAAFETLVEAG
YQPEVAYFECMHELKLIVDLFYQGGLNYMRYSVSDTAEWGDYTAGPKIITDQTRAAMR
QILADIQSGAFAEDWIDENHNGRPRFNAYRQADINHPIEQIGRELRRMMPFVNPREVK
PGEGGA"
misc_feature 204138..205127
/locus_tag="Caur_0165"
/note="ketol-acid reductoisomerase; Provisional; Region:
PRK05479"
/db_xref="CDD:180113"
misc_feature 204180..204671
/locus_tag="Caur_0165"
/note="Acetohydroxy acid isomeroreductase, catalytic
domain; Region: IlvN; pfam07991"
/db_xref="CDD:116601"
misc_feature 204687..205124
/locus_tag="Caur_0165"
/note="Acetohydroxy acid isomeroreductase, catalytic
domain; Region: IlvC; pfam01450"
/db_xref="CDD:110451"
gene 205232..206938
/locus_tag="Caur_0166"
/db_xref="GeneID:5824740"
CDS 205232..206938
/locus_tag="Caur_0166"
/note="TIGRFAM: 2-isopropylmalate synthase;
PFAM: pyruvate carboxyltransferase; LeuA allosteric
(dimerisation) domain;
KEGG: rrs:RoseRS_1965 2-isopropylmalate synthase"
/codon_start=1
/transl_table=11
/product="2-isopropylmalate synthase"
/protein_id="YP_001633809.1"
/db_xref="GI:163845765"
/db_xref="InterPro:IPR000891"
/db_xref="InterPro:IPR002034"
/db_xref="InterPro:IPR005671"
/db_xref="InterPro:IPR013709"
/db_xref="GeneID:5824740"
/translation="MSNTTEPSVEYVRIFDTTLRDGEQAPGCTMTLEEKLEVARQLAR
LRVDIIEAGFPAASPGDWAAVHEIAREIGTPDGPIIAALARANRDDIDKAWSAIQPAA
KKRIHTFMSTSDIHLEYQFRKTRAEALALIHEMVSYARSLCEDVEFSPMDAGRTDPLF
LREAVAVAVAAGATTLNIPDTVGYLTPDEYGAMIRDLRENVPGIERCILSTHCHDDLG
MAVANSLAGVRAGARQVECTINGIGERAGNASLEEVVMALHTRQQYYGLRTRVETREI
ARTSRLVSSFIGVPVPPNKAIVGANAFAHESGIHQDGVLKYRQTYEIMSAETVGLDSN
TLVLGKHSGRHAFRKYLEEKGYKLNEEEFQHVFARFKDLCDRKKKVDDRDIEALIAGE
MQHTPELYKLDHVQYASGIGMIPTATVRLIGPDGQTRIDSAQGTGPVDAVYQAINRII
QRPNELIEFSINAITEGLDAVAEVTVRIREQGAPARLNESSSTATSLTGRRPAQQIFS
GYGVHTDTIVAAAQAYMAALNKMLAARQERIKAEAVAYAAGYSGESGTLPVDIFGGST
LG"
misc_feature 205265..206863
/locus_tag="Caur_0166"
/note="2-isopropylmalate synthase; Validated; Region:
PRK00915"
/db_xref="CDD:179166"
misc_feature 205271..206083
/locus_tag="Caur_0166"
/note="2-isopropylmalate synthase (IPMS), N-terminal
catalytic TIM barrel domain; Region: DRE_TIM_IPMS;
cd07940"
/db_xref="CDD:163678"
misc_feature order(205289..205294,205301..205303,205382..205384,
205484..205486,205550..205552,205676..205678,
205682..205684,205766..205768,205772..205774,
205865..205867,205871..205873)
/locus_tag="Caur_0166"
/note="active site"
/db_xref="CDD:163678"
misc_feature order(205289..205294,205382..205384)
/locus_tag="Caur_0166"
/note="catalytic residues [active]"
/db_xref="CDD:163678"
misc_feature order(205865..205867,205871..205873)
/locus_tag="Caur_0166"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163678"
misc_feature 206369..206827
/locus_tag="Caur_0166"
/note="LeuA allosteric (dimerisation) domain; Region:
LeuA_dimer; pfam08502"
/db_xref="CDD:203962"
gene 207061..207915
/locus_tag="Caur_0167"
/db_xref="GeneID:5824741"
CDS 207061..207915
/locus_tag="Caur_0167"
/EC_number="4.2.1.51"
/note="PFAM: prephenate dehydratase; amino acid-binding
ACT domain protein;
KEGG: rrs:RoseRS_1964 prephenate dehydratase"
/codon_start=1
/transl_table=11
/product="prephenate dehydratase"
/protein_id="YP_001633810.1"
/db_xref="GI:163845766"
/db_xref="InterPro:IPR001086"
/db_xref="InterPro:IPR002912"
/db_xref="GeneID:5824741"
/translation="MQTIAYLGPPGTFSEEAALAYAAGREARLLPLASIPAVVTAIET
EAATVGVLPIENLLEGSVSYTLDLLIHETNLQIAGEIVVPIRQYLLARPGLQLSDIKV
LYAHPQSLAQCRRFVERCLPGVATVASLSNSAAPAEAMADERPAAAIGTLRAAELVGA
TILAREIADSPHNVTRFIVLAREDAPPTGDDKTSFCFGFTREDRPGSLVSALQELAVE
NINMTKLESRPTRAILGQYIFLVDINGHRREPHVARALERIRLHTGMLKIFGSYPRWR
GANGNHAS"
misc_feature 207061..207879
/locus_tag="Caur_0167"
/note="prephenate dehydratase; Provisional; Region:
PRK11898"
/db_xref="CDD:183366"
misc_feature 207070..207615
/locus_tag="Caur_0167"
/note="Prephenate dehydratase; Region: PDT; pfam00800"
/db_xref="CDD:144409"
misc_feature 207634..207879
/locus_tag="Caur_0167"
/note="C-terminal ACT domain of the bifunctional
chorismate mutase-prephenate dehydratase (CM-PDT) enzyme
and the prephenate dehydratase (PDT) enzyme; Region:
ACT_CM-PDT; cd04905"
/db_xref="CDD:153177"
misc_feature order(207676..207687,207736..207747)
/locus_tag="Caur_0167"
/note="putative L-Phe binding site [chemical binding];
other site"
/db_xref="CDD:153177"
gene 207940..209364
/locus_tag="Caur_0168"
/db_xref="GeneID:5824742"
CDS 207940..209364
/locus_tag="Caur_0168"
/EC_number="4.2.1.33"
/note="dehydratase component, catalyzes the isomerization
between 2-isopropylmalate and 3-isopropylmalate"
/codon_start=1
/transl_table=11
/product="isopropylmalate isomerase large subunit"
/protein_id="YP_001633811.1"
/db_xref="GI:163845767"
/db_xref="InterPro:IPR001030"
/db_xref="InterPro:IPR004430"
/db_xref="GeneID:5824742"
/translation="MNKPRTLFEKVWEAHLVRPETAETPAVLYIDLHLIHEVTSPQAF
TELRQRGLRVRRPDKTLATMDHSTPTTPRNHLGIIPVVDPMAISQLEQLRKNCAEFGI
PLFELGDENQGIVHVIGPEQGLTQPGMTIVCGDSHTSTHGAFGALAFGIGTSEVGHVL
ATQCLLQRKPKTCAVRIDGRLGPGVTAKDIILALIAKYGVGGGTGYVFEYMGEAIRAL
SMEERMTICNMSIEGGARAGMVAPDDTTFEYIAGRPFAPKGADFEAAVARWRTLPSDE
GATFDHELTLSASELKPMITYGTNPGMGIPIDAPVPRPEDMPDARSRAALDKALAYMG
LEPGKPLLGHPVDVVFIGSCTNSRLSDLRQAAQFFRGRKVAPGVRVMVVPGSQQVKRA
AEAEGLDRIFKEAGAEWREAGCSACLGMNDDKVPPGKYAVSTSNRNFEGRQGPGARTM
LASPLTAAAAAITGVVTDPRTLLN"
misc_feature 207949..209358
/locus_tag="Caur_0168"
/note="3-isopropylmalate dehydratase large subunit;
Reviewed; Region: PRK00402"
/db_xref="CDD:179006"
misc_feature 208033..209337
/locus_tag="Caur_0168"
/note="3-isopropylmalate dehydratase catalyzes the
isomerization between 2-isopropylmalate and
3-isopropylmalate; Region: IPMI; cd01583"
/db_xref="CDD:153133"
misc_feature order(208045..208047,208054..208056,208342..208347,
209191..209193,209248..209250,209263..209265)
/locus_tag="Caur_0168"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:153133"
misc_feature order(208348..208350,208999..209001,209179..209181,
209188..209193,209245..209247)
/locus_tag="Caur_0168"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:153133"
gene 209376..209981
/gene="leuD"
/locus_tag="Caur_0169"
/db_xref="GeneID:5824743"
CDS 209376..209981
/gene="leuD"
/locus_tag="Caur_0169"
/note="catalyzes the isomerization between
2-isopropylmalate and 3-isopropylmalate in leucine
biosynthesis; forms a heterodimer of LeuC/D"
/codon_start=1
/transl_table=11
/product="isopropylmalate isomerase small subunit"
/protein_id="YP_001633812.1"
/db_xref="GI:163845768"
/db_xref="InterPro:IPR000573"
/db_xref="InterPro:IPR004431"
/db_xref="GeneID:5824743"
/translation="MEPVSTITGKAVVLPVENIDTDQIIPARFLKVTDRSGLAAGLFE
AWRYQADGTPNPDFPLNRPEAAGATILISGRNFGCGSSREHAPWALQDYGFKAVLAPS
FADIFRSNSLKIGLLPVTIDQAVYDELVARYAADPQMHLTIDLATQTVTLPDGRQVHF
PIDAFSKYCLLHGVDQLGFLLQQEEAIIAYEASHPQPVTTR"
misc_feature 209415..209810
/gene="leuD"
/locus_tag="Caur_0169"
/note="Aconatase-like swivel domain of 3-isopropylmalate
dehydratase and related uncharacterized proteins.
3-isopropylmalate dehydratase catalyzes the isomerization
between 2-isopropylmalate and 3-isopropylmalate, via the
formation of 2-isopropylmaleate...; Region: IPMI_Swivel;
cd01577"
/db_xref="CDD:73275"
misc_feature 209616..209624
/gene="leuD"
/locus_tag="Caur_0169"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73275"
gene complement(211032..212369)
/locus_tag="Caur_0170"
/db_xref="GeneID:5824744"
CDS complement(211032..212369)
/locus_tag="Caur_0170"
/note="PFAM: FAD-dependent pyridine nucleotide-disulphide
oxidoreductase; pyridine nucleotide-disulphide
oxidoreductase dimerisation region; FAD dependent
oxidoreductase;
KEGG: nfa:nfa9670 putative dihydrolipoamide dehydrogenase"
/codon_start=1
/transl_table=11
/product="FAD-dependent pyridine nucleotide-disulfide
oxidoreductase"
/protein_id="YP_001633813.1"
/db_xref="GI:163845769"
/db_xref="InterPro:IPR000103"
/db_xref="InterPro:IPR000815"
/db_xref="InterPro:IPR001100"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR004099"
/db_xref="InterPro:IPR006076"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:5824744"
/translation="MKQIVVIGGGAAGVEAAVAAAQGNTKVTLVSEGPIGGRTGWDSL
LPSKVWLHAAEVAGIATAAAGEGVAVNGVQVDPTAVLQRIKHVATRWSDHEQQRLQAA
GVTVMQGVAAFSSPHELTIQTQAGQQTITADVIIIATGSVPRFPPTMKPDGQRIIAPR
FASHLHTLPDDIIVIGGGPTGSEFASLFSRLGVKVTWLVGSPGVLPMFATNARSTLAA
AMQAHGVEIHQVDVERAERTEEGVSVLAADGTTYTAAMAFLAIGRTPDLSRLNLSAAG
LTVEANGQLTVDNYGRTPVNHIFAVGDAAGGPMLANRALAQAWIAGRTAADLPAPGYC
PHTIVHAVYTVPEVAQVGLVMDTELSRIRAEYGSSLKSYLGAETSGWIELTFDPITRQ
VRGGVAVGDHAADLLAPVALAIQTGATLADLAAVFAAYPTLSETVFAAARAAG"
sig_peptide complement(212310..212369)
/locus_tag="Caur_0170"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.979) with cleavage site probability 0.506 at
residue 20"
misc_feature complement(211038..212294)
/locus_tag="Caur_0170"
/note="dihydrolipoamide dehydrogenase; Region:
lipoamide_DH; TIGR01350"
/db_xref="CDD:211643"
misc_feature complement(211623..211856)
/locus_tag="Caur_0170"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
misc_feature complement(211059..211349)
/locus_tag="Caur_0170"
/note="Pyridine nucleotide-disulphide oxidoreductase,
dimerisation domain; Region: Pyr_redox_dim; pfam02852"
/db_xref="CDD:202431"
gene complement(212868..215813)
/locus_tag="Caur_0171"
/db_xref="GeneID:5824745"
CDS complement(212868..215813)
/locus_tag="Caur_0171"
/note="PFAM: glycosyl transferase family 51;
penicillin-binding protein transpeptidase;
KEGG: rca:Rcas_0508 peptidoglycan glycosyltransferase"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_001633814.1"
/db_xref="GI:163845770"
/db_xref="InterPro:IPR001264"
/db_xref="InterPro:IPR001460"
/db_xref="GeneID:5824745"
/translation="MIRSRRLHANGRNGRRHVPPHLLRGLRGRSTPRSAVSRWLVNAL
LAGLGLVAVVIVAIAGFAYNAYAQVAESLKPRLALLDNRELFENSRIFDRNGELLYEF
FDTGKRTKVTIDEISPLLIQATIAIEDKTFYTNPGIDLAGIVRTLIDSLRAGEETGGA
STITQQVIKNSVLTPEERLPERRYERKLKEIILAQELDRIYTKDQILELYLNENFYGN
LAYGIQAASEVYFGVSAADLDLNQASLLAGLPQLPSVYNPINYLERDEQGGYLPPVFV
GDGWLDPDARLPAGTPLPRIRQAAVLRRMVEDGYITEAQARQALATPLRFAPQEAPLN
APHFVFYVRDLLLQRYGAQIVYGGGLRITTTLDLQLQRMAQRTAFERIAELESRNIHN
AAVVIMQPNTGQILAMVGSIDYNAVKPTTTPGESGNVLDGQVNVATRERQPGSALKPF
TYLAAMEQGMTPETVLWDVPTRFPTGTGDWYAPQNYNGQWNGPVRIRTALANSLNMPA
VRALKFAGIDYTIRLLERVGIRTGLKRGAGFYGLSLTLGGGEVSPLELTTAYNTLASG
GRYFAPVAILEITDSQGRVLERFTQTPGEEVVDPALVAIISDMLSDDRARQAIWGLNS
PLRLSLPAAVKTGTTNDWRDAWAVGYTPFVTVGVWTGNNNNEPTARVESLTGGGIIWR
NVMENIFRLIAEDERYRDLFAAPFPNGEIQTEFVLPEEVVPRPICELPGPFGGYREEL
FTLDMIKRLEEAAQPTPEATTGDAIPNEGFCSAYTKVRVVRIPTPEEWTTSGELRPNP
PPPPPTDPKAPPLPQDLSALTDGAYCRPAPDAAYPPELVRDIYLWKLPPPDPDEEVEY
KWRGGDATVPLKYEELPECTPAMFEPPIPVPPVEGAILMPDLRRLGENQAKEVLALLG
IDPGRIYVDYQGPDRAGEDYYRYGPYVVLSSLPAAGEWILPDTTIVLGIRAPDPNPEP
PASDSTEGN"
sig_peptide complement(215619..215813)
/locus_tag="Caur_0171"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.649) with cleavage site probability 0.363 at
residue 65"
misc_feature complement(214896..215531)
/locus_tag="Caur_0171"
/note="Transglycosylase; Region: Transgly; pfam00912"
/db_xref="CDD:201501"
misc_feature complement(213756..215495)
/locus_tag="Caur_0171"
/note="penicillin-binding protein, 1A family; Region:
PBP_1a_fam; TIGR02074"
/db_xref="CDD:211713"
misc_feature complement(213756..214637)
/locus_tag="Caur_0171"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; cl01009"
/db_xref="CDD:207282"
gene 215985..217481
/locus_tag="Caur_0172"
/db_xref="GeneID:5824746"
CDS 215985..217481
/locus_tag="Caur_0172"
/note="KEGG: rrs:RoseRS_0867 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633815.1"
/db_xref="GI:163845771"
/db_xref="GeneID:5824746"
/translation="MHQPSLIGPAILIVLLITLPLASIGDLILDQIGWQPLWLIGASI
IAGMEAFALRMRMLAGLHEAEGGTLRYLAAEIFALVVLARLVATLGFGGEGIRAMMSW
ITDPLAFFDVPFLICLLALTTVVMLSRSGIAAIAAITPNPPQKMPLYTLDVLFYNSDA
KIRRWNAVKAIISGVSWGGLLIIWLQSWRPGNADAFSGWIALYLIGGLSLIELARRRA
SLADWQSDGAEVAVDVQRSWHLLSVMLIGLMIVLTLVFPFPREMSMPEEWRRAIYSLV
GLVIFIGLIASLLFVGLISLIMLLPMLLYLLLNWLLTTNSTSAAMPIPQPPLIPPATA
SEPMVWPGLIFWFCVAVLTVLAFWRIARRQTWLKAAWVNAVTWLTAWWHHLRHRRIGG
WPHWWHSQEEPPPPPHSRCSRSGPVDTVIACYHAALRHATARGYPRRPPQTPAEYAER
ISGELPAGAAELQALTEAYQRVVYAGKPFDRSERRQFSALLRRFRRKV"
sig_peptide 215985..216053
/locus_tag="Caur_0172"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.646) with cleavage site probability 0.429 at
residue 23"
misc_feature 217248..217466
/locus_tag="Caur_0172"
/note="Domain of unknown function (DUF4129); Region:
DUF4129; pfam13559"
/db_xref="CDD:205737"
gene complement(218482..219540)
/locus_tag="Caur_0173"
/db_xref="GeneID:5824747"
CDS complement(218482..219540)
/locus_tag="Caur_0173"
/note="PFAM: MaoC domain protein dehydratase;
KEGG: rca:Rcas_0913 MaoC domain protein dehydratase"
/codon_start=1
/transl_table=11
/product="dehydratase"
/protein_id="YP_001633816.1"
/db_xref="GI:163845772"
/db_xref="InterPro:IPR002539"
/db_xref="GeneID:5824747"
/translation="MSAKTNPGNFFEDFRLGQTIVHATPRTITEGDVALYTSLYGSRF
ALTSSTPFAQSLGLERAPIDSLLVFHIVFGKTVPDISLNAIANLGYAGGRFGAVVYPG
DTLSTTSKVIGLRQNKDGKTGVVYVHSVGVNQWDEVVLEYIRWVMVRKRDPNAPAPET
VVPDLPDSVPVTDLTVPYTVSAANYNLAHAGSNYLWDDYEVGEKIDHVDGVTIEEAEH
MQATRLYQNTARVHFNLHVEREGRFGRRIVYGGHIISLARSLSFNGLANALSIAAINS
GRHTNPSFAGDTIYAWSEILAKMAIPGRTDIGALRVRTVATKDRPCHDFPYRDAEGNY
DPAVVLDFDYTVLMPRRG"
misc_feature complement(219085..219519)
/locus_tag="Caur_0173"
/note="FkbR2 is a Streptomyces hygroscopicus protein with
a hot dog fold that belongs to a conserved family of
proteins found in prokaryotes and archaea but not in
eukaryotes. FkbR2 has sequence similarity to (R)-specific
enoyl-CoA hydratase, the peroxisomal...; Region: FkbR2;
cd03451"
/db_xref="CDD:48046"
misc_feature complement(order(219343..219348,219355..219357,
219400..219402,219409..219411,219415..219417,
219430..219432))
/locus_tag="Caur_0173"
/note="putative active site [active]"
/db_xref="CDD:48046"
misc_feature complement(order(219346..219348,219400..219402,
219409..219411,219415..219417))
/locus_tag="Caur_0173"
/note="putative catalytic site [active]"
/db_xref="CDD:48046"
misc_feature complement(218485..218961)
/locus_tag="Caur_0173"
/note="FkbR2 is a Streptomyces hygroscopicus protein with
a hot dog fold that belongs to a conserved family of
proteins found in prokaryotes and archaea but not in
eukaryotes. FkbR2 has sequence similarity to (R)-specific
enoyl-CoA hydratase, the peroxisomal...; Region: FkbR2;
cd03451"
/db_xref="CDD:48046"
misc_feature complement(order(218788..218793,218800..218802,
218845..218847,218854..218856,218860..218862,
218875..218877))
/locus_tag="Caur_0173"
/note="putative active site [active]"
/db_xref="CDD:48046"
misc_feature complement(order(218791..218793,218845..218847,
218854..218856,218860..218862))
/locus_tag="Caur_0173"
/note="putative catalytic site [active]"
/db_xref="CDD:48046"
gene complement(219562..220608)
/locus_tag="Caur_0174"
/db_xref="GeneID:5824877"
CDS complement(219562..220608)
/locus_tag="Caur_0174"
/note="PFAM: HpcH/HpaI aldolase;
KEGG: rrs:RoseRS_4173 HpcH/HpaI aldolase"
/codon_start=1
/transl_table=11
/product="HpcH/HpaI aldolase"
/protein_id="YP_001633817.1"
/db_xref="GI:163845773"
/db_xref="InterPro:IPR005000"
/db_xref="GeneID:5824877"
/translation="MRKLAHNFYKPLAIGAPEPIRELPVRPERVVHFFPPHVEKIRAR
IPEVAKQVDVLCGNLEDAIPMDAKEAARNGFIEVVKATDFGDTALWVRVNALNSPWVL
DDIAEIVAAVGNKLDVIMIPKVEGPWDIHFVDQYLALLEARHQIKKPILIHALLETAQ
GMVNLEEIAGASPRMHGFSLGPADLAASRGMKTTRVGGGHPFYGVLADPQEGQAERPF
YQQDLWHYTIARMVDVAVAHGLRAFYGPFGDIKDEAACEAQFRNAFLLGCTGAWSLAP
NQIPIAKRVFSPDVNEVLFAKRILEAMPDGSGVAMIDGKMQDDATWKQAKVIVDLARM
IAKKDPDLAQAYGL"
misc_feature complement(219589..220518)
/locus_tag="Caur_0174"
/note="Citrate lyase beta subunit [Carbohydrate transport
and metabolism]; Region: CitE; COG2301"
/db_xref="CDD:32456"
gene complement(220660..221889)
/locus_tag="Caur_0175"
/db_xref="GeneID:5824878"
CDS complement(220660..221889)
/locus_tag="Caur_0175"
/note="PFAM: L-carnitine dehydratase/bile acid-inducible
protein F;
KEGG: rrs:RoseRS_4174 acyl-CoA transferase/carnitine
dehydratase-like protein"
/codon_start=1
/transl_table=11
/product="L-carnitine dehydratase/bile acid-inducible
protein F"
/protein_id="YP_001633818.1"
/db_xref="GI:163845774"
/db_xref="InterPro:IPR003673"
/db_xref="GeneID:5824878"
/translation="MKGILHGLRVVEGSAFVAAPLGGMTLAQLGADVIRFDPIGGGLD
YKRWPVTLDGKHSLFWAGLNKGKRSIAIDIRHPRGQELLTQLICAPGEHAGLFITNFP
ARGWLSYDELKRHRADLIMVNLVGRRDGGSEVDYTVNPQLGLPFMTGPVTTPDVVNHV
LPAWDIVTGQMIALGLLAAERHRRLTGEGQLVKIALKDVGLAMIGHLGMIAEVMINDT
DRPRQGNYLYGAFGRDFETLDGKRVMVVGLTDLQWKALGKATGLTDAFNALGARLGLN
MDEEGDRFRARHEIAALLEPWFHARTLAEVRRIFEQHRVTWAPYRTVREAIAQDPDCS
TDNPMFAMVEQPGIGSYLMPGSPLDFTAVPRLPVQPAPRLGEHTDEILLEVLGLSEAE
VGRLHDEGIVAGPDRAA"
misc_feature complement(220675..221883)
/locus_tag="Caur_0175"
/note="mesaconyl-CoA isomerase; Region: mesacon_CoA_iso;
TIGR04253"
/db_xref="CDD:211976"
misc_feature complement(221155..221682)
/locus_tag="Caur_0175"
/note="CoA-transferase family III; Region: CoA_transf_3;
pfam02515"
/db_xref="CDD:202268"
gene complement(222002..222409)
/locus_tag="Caur_0176"
/db_xref="GeneID:5824879"
CDS complement(222002..222409)
/locus_tag="Caur_0176"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633819.1"
/db_xref="GI:163845775"
/db_xref="InterPro:IPR002173"
/db_xref="GeneID:5824879"
/translation="MVACIGKSDGTAAHPYLAWHGMGSTAINHLPFGWGRAARLTGDR
RHQALFAGPARNPAQITDLRSQRVTQVLAMGARAWHRCTAMRSTRPRLMVACIGKSDG
TAAHPYVARNRMGSTAIHHLPFGWCRAARYWRS"
gene complement(222384..223025)
/locus_tag="Caur_0177"
/db_xref="GeneID:5824880"
CDS complement(222384..223025)
/locus_tag="Caur_0177"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633820.1"
/db_xref="GI:163845776"
/db_xref="InterPro:IPR002173"
/db_xref="GeneID:5824880"
/translation="MGARAWHRCTAMRSTRPRLMVACIGKSNGTAAHPYLAWHGMGST
AINHLPFGWGRAARLTGDRRHQALFAGPARNPAQITDLRSQRVTQVLAGGARAWHRCT
AMRSTRPRPMVACIGKSDGTAAHPYVARNRMGSTARLVQGNGTTWGRAARLTGDRRHQ
AVFAGPAQNPAQISDLRSQRVTQVLVVGARAWHRCMAMRSIRPRLIGGLHRQE"
gene complement(223035..224252)
/locus_tag="Caur_0178"
/db_xref="GeneID:5824881"
CDS complement(223035..224252)
/locus_tag="Caur_0178"
/note="PFAM: L-carnitine dehydratase/bile acid-inducible
protein F;
KEGG: rca:Rcas_0910 L-carnitine dehydratase/bile
acid-inducible protein F"
/codon_start=1
/transl_table=11
/product="L-carnitine dehydratase/bile acid-inducible
protein F"
/protein_id="YP_001633821.1"
/db_xref="GI:163845777"
/db_xref="InterPro:IPR003673"
/db_xref="GeneID:5824881"
/translation="MDGTTTTLPLAGIRVIDAATVIAAPFCATLLGEFGADVLKVEHP
IGGDALRRFGTPTARGDTLTWLSESRNKRSVTLNLQHPEGARVFKELIAHSDVLCENF
RPGTLEKWGLGWDVLSKINPRLIMLRVTGYGQTGPYRDRPGFARIAHAVGGIAYLAGM
PKGTPVTPGSTTLADYMTGLYGCIGVLLALRHREQTGRGQYIDAALYESVFRCSDELV
PAYGMYRKVRERHGSHYNEFACPHGHFQTKDGKWVAISCATDKLFARLANAMGRPELA
SSSVYGDQKVRLAHASDVNEIVRDWCSSLTRAEVLERCYATATPAAPLNDIADFFGDR
HVHARRNLVAIDAEDLGETLIMPNVVPKLSETPGSIRSLGPKLGEHTEEVLKEILGMC
DEQINDLRSKRVI"
misc_feature complement(223038..224243)
/locus_tag="Caur_0178"
/note="Predicted acyl-CoA transferases/carnitine
dehydratase [Energy production and conversion]; Region:
CaiB; COG1804"
/db_xref="CDD:31989"
misc_feature complement(223488..224030)
/locus_tag="Caur_0178"
/note="CoA-transferase family III; Region: CoA_transf_3;
pfam02515"
/db_xref="CDD:202268"
gene complement(224515..225882)
/locus_tag="Caur_0179"
/db_xref="GeneID:5824882"
CDS complement(224515..225882)
/locus_tag="Caur_0179"
/note="PFAM: L-carnitine dehydratase/bile acid-inducible
protein F;
KEGG: rca:Rcas_0909 L-carnitine dehydratase/bile
acid-inducible protein F"
/codon_start=1
/transl_table=11
/product="L-carnitine dehydratase/bile acid-inducible
protein F"
/protein_id="YP_001633822.1"
/db_xref="GI:163845778"
/db_xref="InterPro:IPR003673"
/db_xref="GeneID:5824882"
/translation="MAKASRLTRSTGQPTEVSEGQVTGTSEMPPTGEEPSGHAESKPP
ASDPMSTPGTGQEQLPLSGIRVIDVGNFLAGPYAASILGEFGAEVLKIEHPLGGDPMR
RFGTATARHDATLAWLSEARNRKSVTIDLRQQEGVALFLKLVAKSDILIENFRPGTME
EWGLSWPVLQATNPGLIMLRVSGYGQTGPYRRRSGFAHIAHAFSGLSYLAGFPGETPV
LPGTAPLGDYIASLFGAIGILIALRHKEQTGRGQLIDVGIYEAVFRILDEIAPAYGLF
GKIREREGAGSFIAVPHGHFRSKDGKWVAIACTTDKMFERLAEAMERPELASPELYGD
QRKRLAARDIVNQITIEWVGSLTRDEVMRRCLEKEVPVGPLNSIADMFNDEHFLARGN
FACIEAEGIGEVVVPNVIPRLSETPGRVTNLGPPLGNATYEVLRELLDISAEEIKRLR
SRKII"
misc_feature complement(224518..225717)
/locus_tag="Caur_0179"
/note="Predicted acyl-CoA transferases/carnitine
dehydratase [Energy production and conversion]; Region:
CaiB; COG1804"
/db_xref="CDD:31989"
misc_feature complement(224965..225504)
/locus_tag="Caur_0179"
/note="CoA-transferase family III; Region: CoA_transf_3;
pfam02515"
/db_xref="CDD:202268"
gene 226187..227029
/locus_tag="Caur_0180"
/db_xref="GeneID:5824883"
CDS 226187..227029
/locus_tag="Caur_0180"
/note="KEGG: rrs:RoseRS_4177 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633823.1"
/db_xref="GI:163845779"
/db_xref="GeneID:5824883"
/translation="MSSADWMAWIGRTEQVEDDICLAQAIAAAATLEPPSGAPTADSP
LPPLWHWFYFLPRAPQSQLSSDGHPQRGGFIPPIPYPRRMFAGARIRFHHPLRIGQPA
RREGVIRNITQKSGRSGPLAFVTVGYQIYQHEMLCIEEEQDIVYREPGAPVPAPTPVE
LPPVHDAITRTVVPDPRLLFRFSALTFNAHRIHYDRPYAQHEEGYPGLVVHGPLVAVL
LMELARHHTSRPIVGFSFRSQAPLFDLAPFRLLARPNGDRIDLEAQGPDGATALSATV
ELGG"
misc_feature 226187..227017
/locus_tag="Caur_0180"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG3777"
/db_xref="CDD:33572"
misc_feature 226679..227020
/locus_tag="Caur_0180"
/note="The hotdog fold was initially identified in the E.
coli FabA (beta-hydroxydecanoyl-acyl carrier protein
(ACP)-dehydratase) structure and subsequently in 4HBT
(4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
number of other seemingly unrelated...; Region: hot_dog;
cl00509"
/db_xref="CDD:207084"
misc_feature order(226817..226822,226898..226909)
/locus_tag="Caur_0180"
/note="active site 2 [active]"
/db_xref="CDD:48035"
misc_feature order(226835..226837,226844..226849,226856..226858,
226874..226882)
/locus_tag="Caur_0180"
/note="active site 1 [active]"
/db_xref="CDD:48035"
gene 228787..230322
/locus_tag="Caur_0181"
/db_xref="GeneID:5824884"
CDS 228787..230322
/locus_tag="Caur_0181"
/note="PFAM: protein of unknown function DUF224
cysteine-rich region domain protein;
KEGG: rrs:RoseRS_4179 protein of unknown function DUF224,
cysteine-rich region domain protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633824.1"
/db_xref="GI:163845780"
/db_xref="InterPro:IPR001450"
/db_xref="InterPro:IPR004017"
/db_xref="GeneID:5824884"
/translation="MEPEMQAFVDSLRHNLTAEDVVNLEACMDCKMCGEACAWYLVTG
DEKLHPTYKTGLIRQIYHRYMTVEGRIGGALGLVPTPTVADLREHMQYFWACTACGRC
TLACPSGISIRRIVRLARAAYADSGLSLANPTIRSIIENTDRHRHSFGLTMPQVIGRV
GLFLRSEDLEVPVDVPGADMLFVCPAAGNTKIPDYGIKLIKILNAAGVSYTISPYVID
TGTEIDHIAVHHNLSKQMLEDWEQEADRLGVKNILLVECGCDTRTLYAEASETLGRPF
RYPIVSVDALMLDLIKQGRLPVEKTHLKVTLHDPCYATRLSGLGDLFRELLNLVTDNF
IEMTPNREHNYCCNGGAGGMRLPENTATRRKISVLKANQIRATNATYVTSPCVVCTLS
LEDTCQTYGLAPQGERMALVLFEVVYAAMEQALAKRGELDRMRIPAELQNRDHEFFVA
HSIEGRLSMLMQLPEFPALLDWLEQDDIVRRFSKDHPHVYDLLRAWREVVTAPKQRSI
TAD"
misc_feature 228856..230037
/locus_tag="Caur_0181"
/note="Fe-S oxidoreductase [Energy production and
conversion]; Region: GlpC; COG0247"
/db_xref="CDD:30596"
misc_feature 229699..229968
/locus_tag="Caur_0181"
/note="Cysteine-rich domain; Region: CCG; pfam02754"
/db_xref="CDD:202376"
gene 230354..231175
/locus_tag="Caur_0182"
/db_xref="GeneID:5824885"
CDS 230354..231175
/locus_tag="Caur_0182"
/note="KEGG: rrs:RoseRS_4180 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633825.1"
/db_xref="GI:163845781"
/db_xref="GeneID:5824885"
/translation="MLITLLNIVAPIAMTIFVVGVGLRLGRFVMALLTKRRFRGISPT
FESPPPRLGFWQSLAAVLFGPYQHFYRRANPVWGRGYLAYHVAIITEVIGYSISALIV
FGNILLGRPIPDVALHLEHSFNYTPANLLAIIFGNGEELQSRFLFGDFAPYFVGITWV
AVIFAVIGNLHLMTVLLRRWSGAVVSDIDPPAHRIRTPGRRPFDRVLIRTIIFCIIWT
ELLARLQLVPGIVYVHSLLGLALFTLLPFTYLFHMVYNFLAVFYATRRRMARTIA"
gene complement(231269..232126)
/locus_tag="Caur_0183"
/db_xref="GeneID:5824886"
CDS complement(231269..232126)
/locus_tag="Caur_0183"
/note="TIGRFAM: formate dehydrogenase family accessory
protein FdhD;
PFAM: formate dehydrogenase subunit FdhD;
KEGG: rca:Rcas_4385 formate dehydrogenase family accessory
protein FdhD"
/codon_start=1
/transl_table=11
/product="formate dehydrogenase family accessory protein
FdhD"
/protein_id="YP_001633826.1"
/db_xref="GI:163845782"
/db_xref="InterPro:IPR003786"
/db_xref="GeneID:5824886"
/translation="MITRASTRRRTILKVRDGRWQQTKDTVVVEEPLEIRLATAGNPQ
STALATVMRTPGADVELAAGFLFGEGIVRDRYDIVTIRYCVDADLDEEARFNTLIVTL
RPELDLNLDHIRRLFFVSSSCGVCGKISLEALRLRGCTPLIDDPTLQVRCSVLAGIDQ
RVQQAQELFSRTGGLHAAALISLDGQIHALHEDIGRHNAVDKLIGDHLLGGRLELLRQ
SVLLVSGRASFEIMQKALMAQIPIVAAVGAPSTLAVTLAQHFNMTLIGFLRGSSFNIY
AGAGRVEEG"
misc_feature complement(231284..232123)
/locus_tag="Caur_0183"
/note="formate dehydrogenase accessory protein; Reviewed;
Region: PRK00724"
/db_xref="CDD:179098"
gene complement(232142..234382)
/locus_tag="Caur_0184"
/db_xref="GeneID:5824887"
CDS complement(232142..234382)
/locus_tag="Caur_0184"
/note="TIGRFAM: oxidoreductase alpha (molybdopterin)
subunit;
PFAM: molybdopterin oxidoreductase; molydopterin
dinucleotide-binding region;
KEGG: rrs:RoseRS_4018 oxidoreductase alpha (molybdopterin)
subunit"
/codon_start=1
/transl_table=11
/product="oxidoreductase alpha (molybdopterin) subunit"
/protein_id="YP_001633827.1"
/db_xref="GI:163845783"
/db_xref="InterPro:IPR006656"
/db_xref="InterPro:IPR006657"
/db_xref="InterPro:IPR010046"
/db_xref="GeneID:5824887"
/translation="MKRRGWNPATWVSLVPNGLGHVKPNHYWEIVRTIWENRDNLGKA
WRILHEGVCDGCALGTAGLRDFTMKGVHLCTVRLNLLRLNTMPPLDIHRLHDVADLQR
LNGRELRALGRLPYPMLRRRGEAGFRRISWDDALNEIAARLRNTDPHRMAFYLTSRGI
TNETYYVAQKVARFLGTNNVDNAARLCHAPSTTAMKQALGVAASTCSYRDWIGTDLLI
FIGSDAPNNQPVTTKYLYYAKQHGTRILVINPYREPGLERYWVPSVFESALFGTRLAD
RFFQIHTGGDIAFLNGTLKHLIERNWLDWDFISAHTRDFERVQVALAQQSWDDLERAS
GATRGEMLAFAEALAQAKSAVFVWSMGITQHEYGVENVKAILNLALARGFIGREYCGV
MPIRGHSGVQGGGEMGCTATTFPGGKPITPDTAHWLGEQWGFAVPAWKGLSCGDMLDV
AYNGELDVFYAVGGNFLDTMPDPAYIRTALARPALRVHQDIVLTTQMLVEPADTVILL
PAATRYEQRDGGTETSTEREIIFSPYIAPPPAEARSEWEILLSVAERTKPEQAHLIHF
ADGQQIRNEIARIVPEYNGIQHLHQTGDHIQWGGRILCRDGRFGTPDGKAVFTPLKPP
VTTLPPAMFVLKTRRGKQFNSLIHDERDPLNGALRDDVLINPVDAATLGVREGDWVIL
RSAVGEMRARIKFAPLKSGNIQVHWPEGNVLIDAHQRDPGAGVPSYKALVSIHPITEA
VLQEQR"
misc_feature complement(232187..234361)
/locus_tag="Caur_0184"
/note="oxidoreductase alpha (molybdopterin) subunit;
Region: Fdhalpha-like; TIGR01701"
/db_xref="CDD:162496"
misc_feature complement(232529..234232)
/locus_tag="Caur_0184"
/note="The MopB_ydeP CD includes a group of related
uncharacterized bacterial molybdopterin-binding
oxidoreductase-like domains with a putative molybdopterin
cofactor binding site. These members belong to the
molybdopterin_binding (MopB) superfamily of proteins;
Region: MopB_ydeP; cd02767"
/db_xref="CDD:29463"
misc_feature complement(order(232835..232837,232850..232855,
232901..232903,232910..232918,232988..232996,
233189..233194,233297..233308,233525..233527,
233633..233641,233702..233707,233714..233716,
233720..233725,233819..233827,233831..233833,
234098..234100))
/locus_tag="Caur_0184"
/note="putative molybdopterin cofactor binding site
[chemical binding]; other site"
/db_xref="CDD:29463"
misc_feature complement(232187..232489)
/locus_tag="Caur_0184"
/note="The MopB_CT_ydeP CD includes a group of related
uncharacterized bacterial molybdopterin-binding
oxidoreductase-like domains with a putative molybdopterin
cofactor binding site. This CD is of the conserved
molybdopterin_binding C-terminal (MopB_CT) region...;
Region: MopB_CT_ydeP; cd02787"
/db_xref="CDD:30319"
misc_feature complement(order(232196..232201,232250..232252,
232262..232264,232448..232459,232463..232477))
/locus_tag="Caur_0184"
/note="putative molybdopterin cofactor binding site; other
site"
/db_xref="CDD:30319"
gene 234848..235422
/locus_tag="Caur_0185"
/pseudo
/db_xref="GeneID:5824888"
gene complement(235459..235869)
/locus_tag="Caur_0186"
/db_xref="GeneID:5824889"
CDS complement(235459..235869)
/locus_tag="Caur_0186"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633828.1"
/db_xref="GI:163845784"
/db_xref="GeneID:5824889"
/translation="MRVVIREVLNVGGFFAGETVTLAVQPWPDHGPEQTITIDDAAFV
NITARHLLAPGMVLDLLFAGDRVEQATLLGAADHAGLRTALRPQPISPTPVPRVLSFH
CPHCNLWVPASGDPSGCGICGTPAPTLSLAVQST"
gene complement(235921..237333)
/locus_tag="Caur_0187"
/db_xref="GeneID:5824890"
CDS complement(235921..237333)
/locus_tag="Caur_0187"
/note="PFAM: glycosyl transferase group 1;
KEGG: rrs:RoseRS_0683 glycosyl transferase, group 1"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_001633829.1"
/db_xref="GI:163845785"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:5824890"
/translation="MLRIAYCSPVNPAPSGISDYSEELLPYLAQYAALTLFVEDGLRP
TNPHLAKHFPIKPIRQLERMARRGQFDAIIYHMGNSPAHAGIWRMAQRVPGVIVLHDF
VLHHFMLWYAANVQRDVQRYVAMMRARYGADGDHMAQLMIRSRFSEAAFAFPCNEDVL
AAAKAVIGHSHYLLRRVTATRPDLLCGYVPMGVPLPPLIDRIAARQRLGLPLDQPLLA
SFGHINAWKRIEPTLRAVAGLRREGIDVHCLLVGSVSPNYDLKGVIQRLGLQEAVTVT
GYVARAQFEDYVAATDVCLNLRYPTAGETSASLLRLLGAGKPTLVSAVDAFCELPPDV
AAQVDVDESETDLIIAYCRRLLTDPALAAALGARARAYVATEHTLAGAAQAMIEFLAK
VYGWAPPQRIRPDPLWDPTPVVEAETTPSPPSPQPAAPASLLLQTAAQAMAEIGLTED
DTGALQSVATKIAELQGKHP"
misc_feature complement(236329..237327)
/locus_tag="Caur_0187"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region:
Glycosyltransferase_GTB_type; cl10013"
/db_xref="CDD:212618"
misc_feature complement(236344..237300)
/locus_tag="Caur_0187"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
gene complement(237333..237857)
/locus_tag="Caur_0188"
/db_xref="GeneID:5824929"
CDS complement(237333..237857)
/locus_tag="Caur_0188"
/note="PFAM: ThiJ/PfpI domain protein;
KEGG: rrs:RoseRS_2580 ThiJ/PfpI domain protein"
/codon_start=1
/transl_table=11
/product="ThiJ/PfpI domain-containing protein"
/protein_id="YP_001633830.1"
/db_xref="GI:163845786"
/db_xref="InterPro:IPR002818"
/db_xref="GeneID:5824929"
/translation="MRLAGKQIAILLAEGVEDLEFYVPLMRLQEEGAEVLAAGLDLRP
VRGKNGLEITPTTTIAELRADDLFGLVLPGGWAPDKLRRYQVVTDLVRAMDAAGKVIG
IICHGGSIAISAGIVRGRPATGSTGIKDDLINAGALWVDEAAFRDGHLVWGRVVADIP
VFCRELVAALVERA"
misc_feature complement(237351..237839)
/locus_tag="Caur_0188"
/note="A type 1 glutamine amidotransferase (GATase1)-like
domain found in PfpI from Pyrococcus furiosus; Region:
GATase1_PfpI_like; cd03134"
/db_xref="CDD:153228"
misc_feature complement(237348..237836)
/locus_tag="Caur_0188"
/note="intracellular protease, PfpI family; Region: PfpI;
TIGR01382"
/db_xref="CDD:162331"
misc_feature complement(237540..237545)
/locus_tag="Caur_0188"
/note="proposed catalytic triad [active]"
/db_xref="CDD:153228"
misc_feature complement(237543..237545)
/locus_tag="Caur_0188"
/note="conserved cys residue [active]"
/db_xref="CDD:153228"
gene complement(237972..238892)
/locus_tag="Caur_0189"
/db_xref="GeneID:5824930"
CDS complement(237972..238892)
/locus_tag="Caur_0189"
/note="TIGRFAM: diguanylate cyclase;
PFAM: GGDEF domain containing protein;
KEGG: dar:Daro_3508 PAS:GGDEF"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase"
/protein_id="YP_001633831.1"
/db_xref="GI:163845787"
/db_xref="InterPro:IPR000160"
/db_xref="GeneID:5824930"
/translation="MASAVSFLPIITTDNALITQLSARLGSGWQIVPASTVTPGQPNL
IDLREQIPEGLAAYAEQVPLVGVVVDTAGAAHVLQIGVHEVLTVAELQPLCLTRAITS
ATIRWQIDQTRRQHLAEARAQVQALTVRLQNEQIRDPLTGLYTRRYLNETLDRELRRA
DREQIVLSVALIDIDQLEQVNWQFGRALGDAVLQHLAGLIGRQVRGGDIFCRYGSDEL
LLVLPRVMPETAFQRAEQWRLSVAESIIRPGTLDLQVTISIGLASFPRDARNAVELMS
RVGEALYAAKAAGGNCVRQWPGADRLLSQA"
misc_feature complement(238011..238484)
/locus_tag="Caur_0189"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(238245..238247,238374..238376))
/locus_tag="Caur_0189"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(238242..238253,238257..238259,
238323..238325,238335..238337,238347..238352,
238359..238361))
/locus_tag="Caur_0189"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(238185..238187,238269..238271))
/locus_tag="Caur_0189"
/note="I-site; other site"
/db_xref="CDD:143635"
gene complement(239302..240213)
/locus_tag="Caur_0190"
/db_xref="GeneID:5824931"
CDS complement(239302..240213)
/locus_tag="Caur_0190"
/note="KEGG: rrs:RoseRS_1536 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633832.1"
/db_xref="GI:163845788"
/db_xref="GeneID:5824931"
/translation="MDRLKRFRVAFVIGIIVLLVGGAVVLFGQPGAMMSEQTSFVAMP
TPAPMLSGAPVPAQRDTASFAGGVSSGESAIGSEVAVQRLIIKNASIALEVADVLAAE
QALRQKAEALGGFVASVETYGSGEDLRATIVLRVPVEHFEAVLRDAEGLASNVLRRSV
SGSDVTEEYVDLEARLRNLEATNARLLDLLSRAQNVNDALMVNQALTEIQEQIERIKG
RMQYLEQSAAMSTITVELLPVPPPTPIIEEDAWQPLEVARIALRNLIQLGQTLANAVI
VFLVWTPVWLPLVLIAVWARRRLSQRT"
sig_peptide complement(240127..240213)
/locus_tag="Caur_0190"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.979) with cleavage site probability 0.929 at
residue 29"
misc_feature complement(239323..240075)
/locus_tag="Caur_0190"
/note="Domain of unknown function (DUF4349); Region:
DUF4349; pfam14257"
/db_xref="CDD:206425"
gene complement(240860..241345)
/locus_tag="Caur_0191"
/db_xref="GeneID:5824932"
CDS complement(240860..241345)
/locus_tag="Caur_0191"
/note="KEGG: cya:CYA_0515 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633833.1"
/db_xref="GI:163845789"
/db_xref="GeneID:5824932"
/translation="MTTPCECSPTESATCGLNTPRRQTVSCPVCGASGKRVGLQTVKA
LVSISLRQVQGSSFWFCRSQHCPVVYFAADNGQTLTVDQIRERVYQKEPERPDVLVCY
CFQYRVGDIQQASPEARAAVIADIKAGIAADQCACDVRNPQGSCCLGNVQQVAKQVKL
T"
gene 241621..243909
/locus_tag="Caur_0192"
/db_xref="GeneID:5824933"
CDS 241621..243909
/locus_tag="Caur_0192"
/EC_number="2.7.13.3"
/note="KEGG: gme:Gmet_2788 histidine kinase;
TIGRFAM: PAS sensor protein;
PFAM: ATP-binding region ATPase domain protein; histidine
kinase A domain protein; PAS fold-4 domain protein; PAS
fold domain protein;
SMART: PAS domain containing protein"
/codon_start=1
/transl_table=11
/product="PAS sensor protein"
/protein_id="YP_001633834.1"
/db_xref="GI:163845790"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR013656"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:5824933"
/translation="MAALPFVMIYLIPAIIATGLAIVMWQRRYYRGGRPFTLLLAAIA
WWNLCHALSIADTTFEGTLFWSLLQNVGIVLIGPCWLLIALAYSGEWWRVDRRIRRGI
FIPELIALIFALTNNLHYLWWSTVVADTSRPFLWLSVTRGPAFWFHSIYAYVCLAIGI
IILFRASAHAPPVHRYHSRLMLAAALIPAVGNIAFLSGLKVPWNDDPTPILLLISAAL
AMYTTMRYQLYDLAPLAEQEVIAGLPDGLIVLDSRGLVAEINQHAPRLLGIQQGRWIG
RSLTSLIVNSPFERDLQRLLNTPVTGPSRPVICENGTQAIEVRLRPLQSAAGITTGSL
LLIRDVSERMRAEQERARHIAALRLINSIARSANTAQETSTLLKTIAHIIVQEGHWER
VSIGLIDNAQNIHVTIDYTTAGYGRLHDQVISGVAASALIERIQHGRPELINLSELTV
TDPLAETMQQEGLQSLLLAPLRHDQHAAGILGLASSETKSMTPTLTELVIAIGELITD
ALIRIRLYEEVQRADRLKTGFLATVSHELRTPLTTIIGYTDMLRRGVLGELSPEVQET
LHYMRQASLNLMRLISDILEFSRMEAGQLIIDIEPVPVSVIVQNVVGQMQPQIREHQL
HLMVNIPPDLPMIQANAGRLEQVLINLLSNAIKFNRPQGLIEIKAETRGEWVRISVRD
TGIGIAPADQERIFEEFERVKQKNGHSVSGVGLGLAICRRLIQHMGGKIGVKSTPGEG
STFFCDLPVVPVSRTVGAEADV"
misc_feature 241624..>242370
/locus_tag="Caur_0192"
/note="4-amino-4-deoxy-L-arabinose transferase and related
glycosyltransferases of PMT family [Cell envelope
biogenesis, outer membrane]; Region: ArnT; COG1807"
/db_xref="CDD:31992"
misc_feature 242347..242649
/locus_tag="Caur_0192"
/note="PAS fold; Region: PAS_4; pfam08448"
/db_xref="CDD:117025"
misc_feature 242347..242640
/locus_tag="Caur_0192"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(242395..242397,242407..242409,242425..242427,
242464..242475,242551..242553)
/locus_tag="Caur_0192"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(242455..242457,242467..242469,242491..242493,
242500..242505,242572..242574,242578..242580)
/locus_tag="Caur_0192"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 242734..243156
/locus_tag="Caur_0192"
/note="GAF domain; Region: GAF_3; pfam13492"
/db_xref="CDD:205670"
misc_feature 242920..243882
/locus_tag="Caur_0192"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature 243187..243387
/locus_tag="Caur_0192"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(243205..243207,243217..243219,243229..243231,
243238..243240,243250..243252,243259..243261,
243316..243318,243328..243330,243337..243339,
243349..243351,243358..243360,243370..243372)
/locus_tag="Caur_0192"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 243223..243225
/locus_tag="Caur_0192"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 243550..243849
/locus_tag="Caur_0192"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(243568..243570,243580..243582,243589..243591,
243658..243660,243664..243666,243670..243672,
243676..243681,243760..243771,243817..243819,
243823..243825,243838..243843,243847..243849)
/locus_tag="Caur_0192"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 243580..243582
/locus_tag="Caur_0192"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(243670..243672,243676..243678,243760..243762,
243766..243768)
/locus_tag="Caur_0192"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(243930..244271)
/locus_tag="Caur_R0002"
/db_xref="GeneID:5824934"
ncRNA complement(243930..244271)
/locus_tag="Caur_R0002"
/ncRNA_class="RNase_P_RNA"
/product="RNA component of RNaseP"
/note="Bacterial RNase P class A as predicted by Rfam
(RF00010), score 52.89"
/db_xref="GeneID:5824934"
gene complement(244924..246468)
/locus_tag="Caur_0193"
/db_xref="GeneID:5824935"
CDS complement(244924..246468)
/locus_tag="Caur_0193"
/note="catalyzes the formation of 5-phospho-alpha-D-ribose
1-diphosphate and nicotinate from nicotinate
D-ribonucleotide and diphosphate"
/codon_start=1
/transl_table=11
/product="nicotinate phosphoribosyltransferase"
/protein_id="YP_001633835.1"
/db_xref="GI:163845791"
/db_xref="InterPro:IPR006405"
/db_xref="InterPro:IPR015977"
/db_xref="GeneID:5824935"
/translation="MNNVQQRTATGILFTDQYQLTMAQLYFRMGIHERMAQFDHFFRQ
PPNYGLHAAGYCIAAGLEWLLDWMETACFGPAELEVLRNQRNRVGNPIFAEDFLTYLS
RHGHFGGMTLWAVPEGRVVHAQAPMTIVRGPLLMAQILETALLNHLNYQTLVATKASR
IREASGASTVLEFGLRRGQGMGANAGTRAALIGGADFTSNVGLAHTVGQTAKGTHAHA
MVQAFLALGMSELDAFRAYAEVYPDDCLLLVDTIDTLNSGLPNAIRVFEELRAKGHKP
VGVRLDSGDLAYLAIQTALMLDRSGFPDTVIVLSNDLDELVIWQIQSQIVQEAPRYNA
DANAIIRRLVYGVGTRLVTSHGEGALGGVYKLVALHDGREWQPAIKIAESAAKLTNPG
LKRVWRLYDSRGKATADLIALEDEDPTQEELIRLRHPSDHARQRVVVRAELTGIEPLL
EPAMLAGRRLIEPQPIEQMRARRYADVERLDLGVRRIMNPHIYHVSLSQRLWDMKQEL
LNRFQM"
misc_feature complement(244966..246432)
/locus_tag="Caur_0193"
/note="nicotinate phosphoribosyltransferase; Validated;
Region: PRK09243"
/db_xref="CDD:181722"
misc_feature complement(245368..246432)
/locus_tag="Caur_0193"
/note="Nicotinate phosphoribosyltransferase (NAPRTase),
subgroup A. Nicotinate phosphoribosyltransferase catalyses
the formation of NAMN and PPi from 5-phosphoribosy
-1-pyrophosphate (PRPP) and nicotinic acid, this is the
first, and also rate limiting, reaction...; Region:
NAPRTase_A; cd01570"
/db_xref="CDD:29617"
misc_feature complement(order(245413..245415,245422..245427,
245431..245433,245536..245541,245623..245625,
245872..245877,245938..245946))
/locus_tag="Caur_0193"
/note="active site"
/db_xref="CDD:29617"
gene complement(247214..248317)
/locus_tag="Caur_0194"
/db_xref="GeneID:5824936"
CDS complement(247214..248317)
/locus_tag="Caur_0194"
/note="PFAM: ABC-3 protein;
KEGG: rca:Rcas_1721 transcriptional regulator, MarR
family"
/codon_start=1
/transl_table=11
/product="ABC-3 protein"
/protein_id="YP_001633836.1"
/db_xref="GI:163845792"
/db_xref="InterPro:IPR001626"
/db_xref="GeneID:5824936"
/translation="MSPQLEVQLIAVIIAAACTLPGVFLVLRRMAMLSDAISHTVLLG
IVLAYLISGNLSSPLLFAGAVAMGVLTVWLVELMSGSRLMHEDAAIGLVFPALFSLAV
LLISRFAGNVHLDTDSVLLGELAFAPFDRIELFGLSLPRALVVGSGTLMLNLILLVLF
YKELKLATFDPALATTLGFAPALIHYGLMTSVSLTAVTAFDAVGSILVIALMVAPPAT
AYLLTDRLPRMILLSVAIGIASALSGYWLARWFDVSIAGTMATMTGIAFLLAFLFAPR
RGIVAQRRQQQINRERFALQMLTLHLLNHEGTRDANVECHPRHLIEELHWPAAFAGAI
VRQAEQHGLVQRRGDMLVLTEQGRLFAAEASVR"
misc_feature complement(247502..248293)
/locus_tag="Caur_0194"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cd06550"
/db_xref="CDD:119348"
misc_feature complement(order(247640..247642,247661..247663,
247787..247795,247799..247816,247820..247825,
247829..247837,247841..247846,248234..248242,
248252..248254))
/locus_tag="Caur_0194"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
misc_feature complement(order(247502..247504,247511..247516,
247523..247525,247532..247537,247544..247546,
247694..247696,247955..247957,247964..247969,
248000..248002,248006..248011,248018..248020,
248027..248032,248039..248044,248051..248056,
248060..248062,248216..248218,248231..248233,
248237..248239))
/locus_tag="Caur_0194"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature complement(order(247553..247555,247571..247573,
247706..247708,247718..247720,247925..247927,
248000..248002))
/locus_tag="Caur_0194"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
gene complement(248330..249205)
/locus_tag="Caur_0195"
/db_xref="GeneID:5824937"
CDS complement(248330..249205)
/locus_tag="Caur_0195"
/note="PFAM: transport system permease protein; ABC-3
protein;
KEGG: rca:Rcas_1722 ABC-3 protein"
/codon_start=1
/transl_table=11
/product="ABC-3 protein"
/protein_id="YP_001633837.1"
/db_xref="GI:163845793"
/db_xref="InterPro:IPR000522"
/db_xref="InterPro:IPR001626"
/db_xref="GeneID:5824937"
/translation="MELFTDYTFRNVTLGAMLIGAISGFLGSFAVLRRQALLGDAMSH
AALPGIALAFLITGQRDPFSLLIGAAVAALVAALWLLAVVRTTRIKDDAALALTLAVF
FGFGLVLLSYLQRQPHAAQAGLKSFLFGQAAALIERDLWAMLAIGLPALALVLIFWPQ
VKLISFDPDFARSLGVPVRRFEVLLTGIIVVAIVIGLQTVGVVLMSAMLIAPAVAARQ
WTNRLEYMVVLAAGFGALASLIGAWISTLGEGLATGPLIVLVMSLFTMISLLLAPERG
LIWRHIRRQRVIAFD"
misc_feature complement(248399..249166)
/locus_tag="Caur_0195"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cd06550"
/db_xref="CDD:119348"
misc_feature complement(order(248537..248539,248558..248560,
248684..248692,248696..248713,248717..248722,
248726..248734,248738..248743,249107..249115,
249125..249127))
/locus_tag="Caur_0195"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
misc_feature complement(order(248399..248401,248408..248413,
248420..248422,248429..248434,248441..248443,
248591..248593,248819..248821,248828..248833,
248864..248866,248870..248875,248882..248884,
248891..248896,248903..248908,248915..248920,
248924..248926,249089..249091,249104..249106,
249110..249112))
/locus_tag="Caur_0195"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature complement(order(248450..248452,248468..248470,
248603..248605,248615..248617,248789..248791,
248864..248866))
/locus_tag="Caur_0195"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
gene complement(249226..250002)
/locus_tag="Caur_0196"
/db_xref="GeneID:5824938"
CDS complement(249226..250002)
/locus_tag="Caur_0196"
/note="PFAM: ABC transporter related;
SMART: AAA ATPase;
KEGG: rrs:RoseRS_3069 ABC transporter related"
/codon_start=1
/transl_table=11
/product="ABC transporter-like protein"
/protein_id="YP_001633838.1"
/db_xref="GI:163845794"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:5824938"
/translation="MEVAVDIKDLTVAYGDKPVLWDVDLQVPRGVLMAIVGPNGAGKT
TLLKAMLGLVRPAAGSVRVFGRPYHQQRHLIAYVPQRSSVDWDFPTTVLDVVLMGRYG
HLGWFRRPGRAERDAALAALAQVQMADFAHRQIGQLSGGQQQRVFLARALAQAAEIYV
MDEPFQGVDAVTERAIINVLRDLRAAGKTVVVVHHDLQTVTEYFDHVALINVRRIAAG
PVAEVFTEANLRATYGGRLALLHTPTDTAPAARPTPAPGD"
misc_feature complement(249283..250002)
/locus_tag="Caur_0196"
/note="ABC-type Mn/Zn transport systems, ATPase component
[Inorganic ion transport and metabolism]; Region: ZnuC;
COG1121"
/db_xref="CDD:31318"
misc_feature complement(249349..249984)
/locus_tag="Caur_0196"
/note="ABC component of the metal-type transporters. This
family includes transporters involved in the uptake of
various metallic cations such as iron, manganese, and
zinc. The ATPases of this group of transporters are very
similar to members of...; Region: ABC_Metallic_Cations;
cd03235"
/db_xref="CDD:72994"
gene complement(250016..250933)
/locus_tag="Caur_0197"
/db_xref="GeneID:5824939"
CDS complement(250016..250933)
/locus_tag="Caur_0197"
/note="PFAM: periplasmic solute binding protein;
KEGG: rrs:RoseRS_3070 periplasmic solute binding protein"
/codon_start=1
/transl_table=11
/product="periplasmic solute binding protein"
/protein_id="YP_001633839.1"
/db_xref="GI:163845795"
/db_xref="InterPro:IPR006127"
/db_xref="InterPro:IPR006128"
/db_xref="InterPro:IPR006129"
/db_xref="GeneID:5824939"
/translation="MILRCSLITILLLILTGCTAPVTDGRLRVVATTGPIGDAVQAIA
GDRVTLHTLLGPGIDPHTYIATESDLFALQEARLILYNGLHLEANLERVFQAIKRSGT
IPVVAVAEAVPVEMRLRWEDDEKAYDPHVWHDPQRWRYAVIAIRDALIDLDPDGREVY
QQRSEQYLNDLQALDADLRALAEQVPPERRILVTAHDAFNYFGQAYGFRVEAVQGIST
ASEASAATIRDLTTLVVTERIPAIFVETSVSPRTIEAVQSAARAAGHEVRVGGELYSD
SLGDANGPAGTYFGMMRHNMQTIVAALMP"
sig_peptide complement(250862..250933)
/locus_tag="Caur_0197"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.874) with cleavage site probability 0.436 at
residue 24"
misc_feature complement(250025..250858)
/locus_tag="Caur_0197"
/note="Helical backbone metal receptor (TroA-like domain).
These proteins have been shown to function in the ABC
transport of ferric siderophores and metal ions such as
Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site
is formed in the interface between...; Region: TroA-like;
cl00262"
/db_xref="CDD:199270"
misc_feature complement(250025..250849)
/locus_tag="Caur_0197"
/note="Periplasmic solute binding protein family; Region:
SBP_bac_9; pfam01297"
/db_xref="CDD:201717"
misc_feature complement(order(250493..250495,250649..250651,
250658..250663))
/locus_tag="Caur_0197"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:29734"
gene complement(251566..252552)
/locus_tag="Caur_0198"
/db_xref="GeneID:5824940"
CDS complement(251566..252552)
/locus_tag="Caur_0198"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: bce:BC2064 ribosomal-protein-alanine
acetyltransferase"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_001633840.1"
/db_xref="GI:163845796"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:5824940"
/translation="MHSHGQGWTVGHVGANSRCGVTHTLSPNLTLQYDRCLAGDTAAE
RIINNHMTLDIAIIPAADWPALVELFARCNRADNIELPVYLDGDWTPTMAAARIGETL
VGGVVMYGYFAIEAVIAVDPAWRRRGFGRQLIEQIERWAYARGGNWIALADEAGSCVA
PFVAALDLHRLNVEVELQLDPAQLPPLPEAPDDWQVRLAEKDDVATLTSIIVSAFGDP
VEQVSAFVSDRITHPRHRFVIAEMAGHPVAALRLLRAEQTIIITTFGVCRDLQGRGYG
KLLLLTTLHRLQAAGYQDIRIEVEEQNTAAYHLYRSSGFVPRRRLGQYGRPR"
misc_feature complement(252100..252276)
/locus_tag="Caur_0198"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature complement(order(252160..252165,252193..252201))
/locus_tag="Caur_0198"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
misc_feature complement(251605..251823)
/locus_tag="Caur_0198"
/note="Acetyltransferase (GNAT) family; Region:
Acetyltransf_1; pfam00583"
/db_xref="CDD:201324"
misc_feature complement(251581..>251772)
/locus_tag="Caur_0198"
/note="Acetyltransferases [General function prediction
only]; Region: RimI; COG0456"
/db_xref="CDD:30804"
gene complement(252795..253025)
/locus_tag="Caur_0199"
/db_xref="GeneID:5824941"
CDS complement(252795..253025)
/locus_tag="Caur_0199"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633841.1"
/db_xref="GI:163845797"
/db_xref="GeneID:5824941"
/translation="MRNGTFEQLTVEEVLQTFGPEARAFLRENRIDRSNLRFADACAA
ASVTPDEFFAQLDAGMRRRAARAARHSVAEYA"
gene complement(254264..255088)
/locus_tag="Caur_0200"
/db_xref="GeneID:5824973"
CDS complement(254264..255088)
/locus_tag="Caur_0200"
/note="KEGG: rca:Rcas_4132 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633842.1"
/db_xref="GI:163845798"
/db_xref="GeneID:5824973"
/translation="MIGRNRVQVVTEAITLQYANGKSMARPIGGKRFTPYIGFHIEVG
RDDELDARLGIAGIPQIEIKHQRQGGAEIVRHWALGETILFYPVTSGPVAQTVAGSLG
RNAAATAAAGIGLRWGINDRSRMAVRGYLDLLVRVEMARLVQLSVRSRMSDVLLNVLL
DHGRVCEAADHLIDRSSHPDLVTFHELALPLGPGEEEEWGKGETTTVVPFKSLHPAQI
DRDYIQRIWRPESVHQAALRDWAGIQAWASEYALQNDERVTGERNDVVETSHEIGR"
gene complement(255295..259257)
/locus_tag="Caur_0201"
/db_xref="GeneID:5824974"
CDS complement(255295..259257)
/locus_tag="Caur_0201"
/note="TIGRFAM: autotransporter-associated beta strand
repeat protein;
PFAM: Ig domain protein group 1 domain protein; Ig family
protein;
KEGG: spu:761405 hypothetical protein LOC761405"
/codon_start=1
/transl_table=11
/product="beta strand repeat-containing protein"
/protein_id="YP_001633843.1"
/db_xref="GI:163845799"
/db_xref="InterPro:IPR003344"
/db_xref="InterPro:IPR008009"
/db_xref="InterPro:IPR013425"
/db_xref="GeneID:5824974"
/translation="MQFWRGAMNRPIPRALLSTLAVILLLIWSLVFSPVFAATSTWIG
GNGSWSDPTKWSGGVPSSRHDVAVFPYTPFPLAIDLDGTFEIGEVRFDSPMPYLLMTN
SNGSLYFPPAGAGAIRVLSGNHVIYVPIELQKIISFDIAADSSLLIFSPNNLLRGSGG
ITKTGEGELYLLAANEHRGRTTINGGAIVIAHNQAFGTSKLELLSGRLINAGSDRIIT
NEISQLNNNFTLDSGDYRLSFSTPWSLPGNREITVEGDVIFAKITDPAASRNLRKNGA
GDLTINLTASGSNIGSFVRNQGSGRLNLYGSGTVGAIVYNPTSGGGEIGVGDQRDLNT
GAVIRGRGTLSIAGNGDGVRLHSPNISLHFEIGPGGDKLVLINTSNNSTRNASIELVG
TGNPAGATLSLALVPGYTPVAGDIWTILEHASAGSGGILGTFQGLPNGAVIDVDGYPF
QIVYTSKTVSLVALPPLVVEQRGGNNQSAVVDTDFAQPLEVWVGDENGNPLSGVYVSF
TAPASGASAVFPAGNGAVSDANGLVQVPVRANNVAGTYTVTASVANASTDFTLTNIAA
APSPTPSPSATASATPEPTASVTPEPTASVTPEPTASATPEPTASVTPEPTASATPEP
TASVTPEPTASATPEPTASVTPEPTASTTPSPSATASVTPSPSATASVTPSPSATASA
TPEPTASTTPSPSATASTTPEPTASTTPSPSATASTTPSPSATASATPEPTASTTPSP
SATASVTPSPSATASTTPSPSATASVTPSPSATASMTPSPSATASATPEPTASTTPSP
SATASVTPSPSATASTTPSPSATASTTPSPSATASATPSPSATASVTPEPTASTTPSP
SATASATPEPTASVTPSPSATASVTPSPSATASVTPSPSATASTTPSPSVTASTTPSP
SATASTTPSPSATASTTPSPSATASTTPSPSATASTTPSPSATASTTPSPSATASATP
EPTASVTPSPSATASTTPSPSATASVTPSPSATASVTPSPSATASTTPEPTASTTPSP
SATASTTPSPSATASTTPSPSATASTTPEPTASVTPSPSATASVTPSPSATASTTPEP
TASTTPSPSATASATPEPTASTSPVSTVTTSPVPTVTTSPVPTVTTSPVPTVTTSPVP
TVTTSPVPTVTTSPVPTVTTSPVPTVTTSPVPTVTTSPVPTVTTSPVPTVTTSPVPTV
TTSPVPTETPSPVPTPGEAPHLELSLPPSIAVGSLVQTQLNASGGSGSYVYQSTGQLP
SGLVLLADGRLEGQVTQVGTYTFTIIVTDSNGQTASYTYEIVVEPMRIFVPVIMRAAP
"
sig_peptide complement(259144..259257)
/locus_tag="Caur_0201"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 38"
misc_feature complement(258685..258780)
/locus_tag="Caur_0201"
/note="Autotransporter-associated beta strand repeat;
Region: Autotrns_rpt; cl15373"
/db_xref="CDD:212374"
misc_feature complement(257578..257835)
/locus_tag="Caur_0201"
/note="Bacterial Ig-like domain (group 1); Region: BID_1;
smart00634"
/db_xref="CDD:197809"
gene 259575..260486
/locus_tag="Caur_0202"
/db_xref="GeneID:5824975"
CDS 259575..260486
/locus_tag="Caur_0202"
/note="TIGRFAM: RarD protein, DMT superfamily transporter;
PFAM: protein of unknown function DUF6 transmembrane;
KEGG: mms:mma_3532 transporter of the DMT superfamily,
chloramphenicol-sensitivity protein (RarD family)"
/codon_start=1
/transl_table=11
/product="transporter DMT superfamily protein"
/protein_id="YP_001633844.1"
/db_xref="GI:163845800"
/db_xref="InterPro:IPR000620"
/db_xref="InterPro:IPR004626"
/db_xref="GeneID:5824975"
/translation="MTNKTTLQGISAAIAAYALWGLLPVYWKALNGASATEILAHRMI
WSLLFLLGVLAIRRQWEWITVIRQQRRLRLTYLASAILLAANWGIYVWAVQINRVVEA
SLGYFINPLVSIALGVLVLRERLRPAQWLAIGIAAAGVAWLTYSAGALPWIALALALS
FGLYGLLRKQTPLGSFEALTVETLWMFPPALLWLSWLAGANGGIHHDTGLWMLLISTG
VVTAAPLLFFGAATRRIPLTTIGILQYLAPTLQLVLGVLVYGEPFSTAQLIGFGAIWT
ALAIYTLDSFIAVRHYRAKLSQEAIQR"
misc_feature 259581..260444
/locus_tag="Caur_0202"
/note="Predicted permeases [General function prediction
only]; Region: RarD; COG2962"
/db_xref="CDD:32782"
misc_feature 259611..260012
/locus_tag="Caur_0202"
/note="EamA-like transporter family; Region: EamA;
cl01037"
/db_xref="CDD:207295"
gene complement(260447..261064)
/locus_tag="Caur_0203"
/db_xref="GeneID:5824976"
CDS complement(260447..261064)
/locus_tag="Caur_0203"
/note="PFAM: protein of unknown function DUF121;
KEGG: rxy:Rxyl_0959 protein of unknown function DUF121"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633845.1"
/db_xref="GI:163845801"
/db_xref="InterPro:IPR002835"
/db_xref="GeneID:5824976"
/translation="MIGIVIPIKRLHLAKSRLIDLLDPADRQQLVVTMVRHVITTARQ
AVSYLSIPARIWLVSPEPTLATDSEGIEWLPDNQEELNAALTEARQRIQAAGVQIMMV
LAGDLPFVTVRDLILLSEALTDNDVVVAPDQHGQGTNALGLHLPSQLPFGFGPDSAGY
HLRTAARLGLRASLISTPTLAFDLDDGERLQQYYRCIASCDNFAR"
misc_feature complement(260459..261058)
/locus_tag="Caur_0203"
/note="2-phospho-L-lactate guanylyltransferase; Region:
F420_cofC; TIGR03552"
/db_xref="CDD:163320"
misc_feature complement(order(260747..260749,260753..260755,
260891..260893))
/locus_tag="Caur_0203"
/note="active site"
/db_xref="CDD:132997"
gene complement(261061..262017)
/locus_tag="Caur_0204"
/db_xref="GeneID:5824977"
CDS complement(261061..262017)
/locus_tag="Caur_0204"
/note="catalyzes the formation of the L-lactyl
phosphodiester of
7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and
GMP from actyl (2) diphospho-(5')guanosine (LPPG) to
7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO)"
/codon_start=1
/transl_table=11
/product="LPPG:FO 2-phospho-L-lactate transferase"
/protein_id="YP_001633846.1"
/db_xref="GI:163845802"
/db_xref="InterPro:IPR002882"
/db_xref="InterPro:IPR010115"
/db_xref="GeneID:5824977"
/translation="MIVVLSGGVGAARFIEGLAAVVAPERIAAVVNTGDDMVLHGLYI
SPDLDIVTCTLADVIDRNQGWGIAGDTDACMQWLARLGAPTWFKLGDRDLALHIYRTA
RLQAGATLSQVADEIRQALGVAVSIIPMSDDPAPTHVLTDQGELHFEEYFVRERCQPV
VHGVRLHAAGPVRPAPALLPLLMSAEVIIIAPSNPVVSVGPILAIPEVRTTLTTTNTP
VVAVSPIVGGAAIKGPAVPLMKAVGLTPTALGVAETYADLIDGIVIDTIDAELAPAIQ
SRGIATLVTDTIMRGMPEKMALARATLELASLIAPSTARSLV"
misc_feature complement(261106..262014)
/locus_tag="Caur_0204"
/note="LPPG:FO 2-phospho-L-lactate transferase; important
in F420 biosynthesis; Region: CofD_like; cd07186"
/db_xref="CDD:132872"
misc_feature complement(order(261319..261324,261424..261426,
261436..261441,261991..261999))
/locus_tag="Caur_0204"
/note="phosphate binding site [ion binding]; other site"
/db_xref="CDD:132872"
misc_feature complement(order(261655..261660,261703..261705,
261712..261714,261721..261726,261733..261738,
261742..261747,261784..261789,261796..261801,
261892..261900))
/locus_tag="Caur_0204"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132872"
misc_feature complement(order(261559..261561,261739..261741,
261754..261759,261823..261825,261880..261882))
/locus_tag="Caur_0204"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:132872"
gene complement(262084..262935)
/locus_tag="Caur_0205"
/db_xref="GeneID:5824978"
CDS complement(262084..262935)
/locus_tag="Caur_0205"
/note="PFAM: Thioredoxin domain;
KEGG: rrs:RoseRS_1818 thioredoxin"
/codon_start=1
/transl_table=11
/product="thioredoxin domain-containing protein"
/protein_id="YP_001633847.1"
/db_xref="GI:163845803"
/db_xref="InterPro:IPR006662"
/db_xref="InterPro:IPR013766"
/db_xref="GeneID:5824978"
/translation="MITGVSNKANPATAQAVVIDVTEATFEREVLQRSQQTPVVIDFW
APWCGPCRVLGPTLERLAREAGGTWVLAKINVDENPRLAQMFRVQGIPAVKAVYQGKI
VDEFTGALPESQVRTWLKRIVPDRNADLLAMAQALEATNPVEAIARYRLILGQDPNNE
AALFHLGRLLALRGDPEGITTLKQVPAGGPFGGRAIAGLAIADLVNAPAEPADGSEGL
YRQAAIAVRSGDYATAIEHLLTLVARDRAFRDDGARKALLALFALLGDDHPLVGPARR
RLANLLF"
misc_feature complement(262087..262911)
/locus_tag="Caur_0205"
/note="Thioredoxin domain-containing protein
[Posttranslational modification, protein turnover,
chaperones]; Region: COG3118"
/db_xref="CDD:32932"
misc_feature complement(262576..262854)
/locus_tag="Caur_0205"
/note="ybbN protein family; ybbN is a hypothetical protein
containing a redox-inactive TRX-like domain. Its gene has
been sequenced from several gammaproteobacteria and
actinobacteria; Region: ybbN; cd02956"
/db_xref="CDD:48505"
gene complement(263035..263784)
/locus_tag="Caur_0206"
/db_xref="GeneID:5824979"
CDS complement(263035..263784)
/locus_tag="Caur_0206"
/note="KEGG: rrs:RoseRS_4071 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633848.1"
/db_xref="GI:163845804"
/db_xref="InterPro:IPR002994"
/db_xref="GeneID:5824979"
/translation="MMTSTTSPRVHRLLRGWWIAKHLFALIIFVTLITLGFWQLDRLA
QRRAANAARLAALSQPAIPLTPATDPATVIGRRVVVSGTFRNEESVVLRGRRSDSGVD
GVHLLTPLQIAGSDQAVLVDRGWIPSAQGAATAYAVTRPVTIEGIARAPQVRPDSPLA
GRDLPLPGETRINAWLRVDVPAIQQQVGAPLLPLFIEQLPDGSSALPRPPDPYRLDEG
PHLSYALQWFTFAGIVGVGYIFLLRQELQRR"
misc_feature complement(263074..263691)
/locus_tag="Caur_0206"
/note="SURF1 superfamily. Surf1/Shy1 has been implicated
in the posttranslational steps of the biogenesis of the
mitochondrially-encoded Cox1 subunit of cytochrome c
oxidase (complex IV). Cytochrome c oxidase (complex IV),
the terminal electron-transferring...; Region: SURF1;
cd06662"
/db_xref="CDD:119401"
gene 264040..264711
/locus_tag="Caur_0207"
/db_xref="GeneID:5824980"
CDS 264040..264711
/locus_tag="Caur_0207"
/note="PFAM: TrkA-N domain protein; TrkA-C domain protein;
6-phosphogluconate dehydrogenase NAD-binding;
KEGG: cyb:CYB_1337 K+ transporter, trk family"
/codon_start=1
/transl_table=11
/product="TrkA domain-containing protein"
/protein_id="YP_001633849.1"
/db_xref="GI:163845805"
/db_xref="InterPro:IPR003148"
/db_xref="InterPro:IPR006037"
/db_xref="InterPro:IPR006115"
/db_xref="GeneID:5824980"
/translation="MARKPSRLEFAVIGLGRFGRSVALNLIERGHTVLGIDRDPNIVQ
QLADRMTQVVALDSSNEDALRAVDIMSFDTVVVAIGSQFEANLMTTVALKSLGVKRVV
CKALNERQQYILTRVGADMVVLPEHEAGARLAWQLSEPHVLEHLNLGSGFSVAEVRVP
APLVGQTLMQSGLRRRYGINVLAVKHNGKMIVTPPPDYVFSRDDRILIIGADSSISTF
CDLSS"
misc_feature 264064..264702
/locus_tag="Caur_0207"
/note="K+ transport systems, NAD-binding component
[Inorganic ion transport and metabolism]; Region: TrkA;
COG0569"
/db_xref="CDD:30915"
misc_feature 264067..264414
/locus_tag="Caur_0207"
/note="TrkA-N domain; Region: TrkA_N; pfam02254"
/db_xref="CDD:202177"
misc_feature order(264079..264081,264082..264087,264091..264093,
264148..264156,264271..264279)
/locus_tag="Caur_0207"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature 264499..264702
/locus_tag="Caur_0207"
/note="TrkA-C domain; Region: TrkA_C; pfam02080"
/db_xref="CDD:202105"
gene 264708..266084
/locus_tag="Caur_0208"
/db_xref="GeneID:5824981"
CDS 264708..266084
/locus_tag="Caur_0208"
/EC_number="3.6.3.14"
/note="PFAM: cation transporter;
KEGG: rrs:RoseRS_2088 H(+)-transporting two-sector ATPase"
/codon_start=1
/transl_table=11
/product="H(+)-transporting two-sector ATPase"
/protein_id="YP_001633850.1"
/db_xref="GI:163845806"
/db_xref="InterPro:IPR003445"
/db_xref="GeneID:5824981"
/translation="MTALVTGRNLARLRRKPIPPPLRLVGGLALLIVIGTLLLLLPIS
STRPLTFMEALFTAASALSVTGLSVITPVQDLSLVGQILLMLLIQIGGVGFMVVAVII
FRLLGRRISFTDRIALSDSLGLLSPAAIVTLTRRVLITVVTIEAIGAMLLYIHWRTDP
RLSEGQAFFYALFHAVSAFCNAGFDLFTGTPGFENGIPRDSITLFIMGMLILTGGLGI
PVIADLISYANERKLSLHTRITLLVVSFLVGIGTFGLWLSEGFDADGTLHGQPLDRQL
IVTTFQSISARTAGFSGMDSFESLTPASQLLLIALMFIGCAPASMGGGITTGTFAVLS
ISLWSYARGLPTAQFAGRSLATGMVRRAAAVLTISLFVVLLASWLIVATHDATLDQVV
FEVVSAFATCGLTLGFTSELNTFGQLIIIAVMFWGRLGALTIITAIARQSATPQQITY
PEEQILIG"
misc_feature 264858..265991
/locus_tag="Caur_0208"
/note="potassium uptake protein, TrkH family; Region:
2a38; TIGR00933"
/db_xref="CDD:162118"
misc_feature 265170..266027
/locus_tag="Caur_0208"
/note="Cation transport protein; Region: TrkH; pfam02386"
/db_xref="CDD:111294"
gene 266088..267269
/locus_tag="Caur_0209"
/db_xref="GeneID:5824982"
CDS 266088..267269
/locus_tag="Caur_0209"
/EC_number="1.3.99.22"
/note="KEGG: rrs:RoseRS_3875 putative oxygen-independent
coproporphyrinogen III oxidase;
TIGRFAM: oxygen-independent coproporphyrinogen III
oxidase;
PFAM: Radical SAM domain protein; HemN domain protein;
SMART: Elongator protein 3/MiaB/NifB"
/codon_start=1
/transl_table=11
/product="oxygen-independent coproporphyrinogen III
oxidase"
/protein_id="YP_001633851.1"
/db_xref="GI:163845807"
/db_xref="InterPro:IPR004559"
/db_xref="InterPro:IPR006638"
/db_xref="InterPro:IPR007197"
/db_xref="InterPro:IPR010723"
/db_xref="GeneID:5824982"
/translation="MRHLYLHIPFCHRRCSYCDFNTYANMEHRIEAYVDALCQELAML
RDQLPPLPASPEAAALRPSIFFGGGTPSMLSPAQIERILQAAAEIVPLTGAEISLEAN
PGTVLGRDYLRDLRSLGINRLSMGVQSLHDPTLRMLGRIHTAAEAYASFNDARAVGFE
SINLDFIFGLPGQDIEQWRATLTEIIRWEVDHIALYSLILEENTPLYAQVTAGRLQIP
DDDLTGAMYELAMEMLGAAGYRHYEISNWVRPSVSDRPDAPPALACQHNLAYWLNSDY
LAAGAGAHGHVFPQRYANLRPIDSYITAVQSGRRPIAETTLLTSADLAAETMFMGLRL
DIGVGFAHFAARVGQSLLDYYGPTLEQLSQQGLIECSAQRVYLTPRGRMLGNQVFAHF
V"
misc_feature 266088..267266
/locus_tag="Caur_0209"
/note="coproporphyrinogen III oxidase; Provisional;
Region: PRK08599"
/db_xref="CDD:181496"
misc_feature 266118..266708
/locus_tag="Caur_0209"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature order(266118..266120,266124..266126,266130..266132,
266136..266144,266286..266288,266292..266297,
266385..266393,266463..266465,266586..266588,
266676..266681)
/locus_tag="Caur_0209"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
misc_feature 267039..267236
/locus_tag="Caur_0209"
/note="HemN C-terminal domain; Region: HemN_C; pfam06969"
/db_xref="CDD:203555"
gene 267365..268417
/locus_tag="Caur_0210"
/db_xref="GeneID:5824983"
CDS 267365..268417
/locus_tag="Caur_0210"
/note="TIGRFAM: TIM-barrel protein, nifR3 family;
PFAM: dihydrouridine synthase DuS; dihydroorotate
dehydrogenase;
KEGG: rrs:RoseRS_0864 putative TIM-barrel protein, nifR3
family"
/codon_start=1
/transl_table=11
/product="NifR3 family TIM-barrel protein"
/protein_id="YP_001633852.1"
/db_xref="GI:163845808"
/db_xref="InterPro:IPR001269"
/db_xref="InterPro:IPR001295"
/db_xref="InterPro:IPR004652"
/db_xref="GeneID:5824983"
/translation="MNNNITLEEIARLPTSYQVAHIRIEPNIILAPMAGVTDSIFRRM
ILRLGGCGLVSTEMTNAASVSPKALRRHRLLDYLPEERPLTMQISGNDPDLVANAARV
VEQLGADIIDINCGCPSPKVTGGGHGSALLRDLPKMERLLRAVREAVQIPVTLKFRAG
WDEQSLNFIEAGKRAEAAGVSALALHPRTREQGYKGQADWSRVAALKQAVSIPVIGSG
DVTSAHDALIRLRDSGADGVMIGRGAMANPWIFRQIADLRRGVTPYVPTPADKRNLLI
EYMTICAEELPERLALNKIKQLIGQFHVGLPGSNHLRVAVHTSTSLAEARDAIERFFA
PFLESDRVVQEMVAAD"
misc_feature 267443..268363
/locus_tag="Caur_0210"
/note="putative TIM-barrel protein, nifR3 family; Region:
nifR3_yhdG; TIGR00737"
/db_xref="CDD:129820"
misc_feature 267443..268138
/locus_tag="Caur_0210"
/note="Dihydrouridine synthase-like (DUS-like) FMN-binding
domain. Members of this family catalyze the reduction of
the 5,6-double bond of a uridine residue on tRNA.
Dihydrouridine modification of tRNA is widely observed in
prokaryotes and eukaryotes, and also...; Region:
DUS_like_FMN; cd02801"
/db_xref="CDD:73368"
misc_feature order(267455..267463,267536..267538,267623..267625,
267704..267706,267830..267832,267920..267922,
268013..268015,268019..268021,268085..268090)
/locus_tag="Caur_0210"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73368"
misc_feature order(267623..267625,267713..267718,267830..267832,
267836..267838,267917..267922,267926..267931,
268016..268021,268088..268090)
/locus_tag="Caur_0210"
/note="active site"
/db_xref="CDD:73368"
misc_feature order(267713..267715,267836..267838,267920..267922,
267926..267928)
/locus_tag="Caur_0210"
/note="catalytic residues [active]"
/db_xref="CDD:73368"
misc_feature order(267716..267718,267830..267832,267917..267919,
267929..267931,268016..268021)
/locus_tag="Caur_0210"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73368"
gene 269002..271686
/locus_tag="Caur_0211"
/db_xref="GeneID:5824984"
CDS 269002..271686
/locus_tag="Caur_0211"
/note="TIGRFAM: polymorphic outer membrane protein;
PFAM: Polymorphic membrane protein Chlamydia;
KEGG: rca:Rcas_2873 polymorphic outer membrane protein"
/codon_start=1
/transl_table=11
/product="polymorphic outer membrane protein"
/protein_id="YP_001633853.1"
/db_xref="GI:163845809"
/db_xref="InterPro:IPR003368"
/db_xref="GeneID:5824984"
/translation="MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDN
DLCTLREAILTSNNIPPNDDCGPGSADDDVITFSVSGTIVLNTPMVNITSGQGALTID
GGRNIVISGNNLAIFTVAVGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNN
DASNLGGAIYNTGGIVTITSSTFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLG
GTIYNVSGTINLYNTIVANSGSSGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNII
GSDPDLGPLTGAPAYFPLNTGSPAIDNGSNAYCAATDQRGVLRPQDGDGNSSVVCDIG
AYEVDIATRTVVNITRAGADPTNAATATFTVTFSEPVTGLDSADFSLTTTGSISGASV
GSVSGSGASYTVTVTTGSGDGTLRLDIPTAATITDLAGNTVGGLPFTGGESYTIDKTT
PTVVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGA
SYTVTVATGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESYTIDKTTPTVVNITR
AGADPTNATTATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTT
GSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESYTIDKTTPTVVSITRAEADPTNA
ATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVSGSGAAYTVTVTTGSGDGSLR
LDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTINQAPAQTDPAISSPIRFIV
IFNKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFEVVVSGMSGNGTVIASI
PVNVVQDLAGNGNTASTSTDNEVTYQPEIRIYLPVIMR"
misc_feature 269095..269172
/locus_tag="Caur_0211"
/note="CSLREA domain; Region: CSLREA_Nterm; TIGR04214"
/db_xref="CDD:211937"
gene 271968..272450
/locus_tag="Caur_0212"
/db_xref="GeneID:5824985"
CDS 271968..272450
/locus_tag="Caur_0212"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633854.1"
/db_xref="GI:163845810"
/db_xref="GeneID:5824985"
/translation="MHDGYLFTLGICGSAEEDDPGPVMLNSLLAALPPVKRAAFLGTI
PSDQPDQLIAEIITDMRDAELIVIVTPATTPQLPNRLNNLLRAAYAAGVGGRFATLIA
VGPYAAAVLPALQAAAATCGLRIASTCAANTDDEPPLADVQAAYATARAALAPHALPH
"
gene 272460..273275
/locus_tag="Caur_0213"
/db_xref="GeneID:5824986"
CDS 272460..273275
/locus_tag="Caur_0213"
/note="PFAM: phospholipid/glycerol acyltransferase;
KEGG: rrs:RoseRS_2705 phospholipid/glycerol
acyltransferase"
/codon_start=1
/transl_table=11
/product="phospholipid/glycerol acyltransferase"
/protein_id="YP_001633855.1"
/db_xref="GI:163845811"
/db_xref="InterPro:IPR002123"
/db_xref="GeneID:5824986"
/translation="MQAMTTPRIPANKIWIADEAIYYLLARPALKRSFDHVWFAQYGP
RPDPRHGPYIFYLNHSAWWDGYMMMLIHRAIMHRAFDSYVMMEERQLRAYRFFTWCGA
FSIERRDPDDAQRSQLYAANLLRERRDRALYIFPQGRIEANDYRPLTVYPGIARIAAL
VGDVTLCPIALRYEFLGQQWPHAFVQIGPAHPPASRDDIEAIRRDVAMRLTDAVDRLR
TDVIEQRLGRFQPLLSGRWGIDRTWDAVRGWFRRRGGDDGPAAVAANRLRARS"
misc_feature 272547..273104
/locus_tag="Caur_0213"
/note="Lysophospholipid acyltransferases (LPLATs) of
glycerophospholipid biosynthesis; Region: LPLAT; cd06551"
/db_xref="CDD:153244"
misc_feature order(272634..272636,272643..272645,272649..272651,
272715..272726,272871..272879)
/locus_tag="Caur_0213"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153244"
gene complement(273196..274053)
/locus_tag="Caur_0214"
/db_xref="GeneID:5824795"
CDS complement(273196..274053)
/locus_tag="Caur_0214"
/note="PFAM: protein of unknown function DUF422;
KEGG: rrs:RoseRS_2706 protein of unknown function DUF422"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633856.1"
/db_xref="GI:163845812"
/db_xref="InterPro:IPR007354"
/db_xref="GeneID:5824795"
/translation="MFSDQSILQNLRRAVVTLFAVYLFIYPFAIVLVALDKVPVWGTW
MGGALLILQGTLMGFWLTVRYRWWGAIAAGLILVVSWAVEHVGATTGFPFGSYSYTDV
LQPQIFGVVPLAIPFAWLLIVVAAVGVAERIGHRDGKPVNDHQLNPTRVLTAASFALL
LDVTIEPFAVYINRYWVWSSAEGGVYYGIPASNFIAWWVTSLILSWVLLHQRRSAARR
GHTPQPFMIWLPPVLYLTNLTMFVVVNLARGQVLPALIGGLIMIVLAGDWLLPRLARR
LRRVAETNP"
misc_feature complement(273283..273933)
/locus_tag="Caur_0214"
/note="Protein of unknown function (DUF422); Region:
DUF422; pfam04240"
/db_xref="CDD:146727"
gene 275167..275586
/locus_tag="Caur_0215"
/db_xref="GeneID:5824796"
CDS 275167..275586
/locus_tag="Caur_0215"
/note="PFAM: response regulator receiver;
KEGG: rca:Rcas_1967 response regulator receiver protein"
/codon_start=1
/transl_table=11
/product="response regulator receiver"
/protein_id="YP_001633857.1"
/db_xref="GI:163845813"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:5824796"
/translation="MVNTNGHPVRILLVEDDNNIGRIIELAMRSINTPYEFESVLSAE
EALERWEAQPFDLLISDYNLRGMNGVRLVKTLRERGYYPATLMVTAYDSAEVREAVKE
AAIDSYMTKPFFIDELIENIKQLLPGSKQMRERIING"
misc_feature 275197..275535
/locus_tag="Caur_0215"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 275200..275544
/locus_tag="Caur_0215"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(275209..275214,275347..275349,275371..275373,
275431..275433,275488..275490,275497..275502)
/locus_tag="Caur_0215"
/note="active site"
/db_xref="CDD:29071"
misc_feature 275347..275349
/locus_tag="Caur_0215"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(275356..275361,275365..275373)
/locus_tag="Caur_0215"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 275497..275505
/locus_tag="Caur_0215"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(275669..276721)
/locus_tag="Caur_0216"
/db_xref="GeneID:5824797"
CDS complement(275669..276721)
/locus_tag="Caur_0216"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633858.1"
/db_xref="GI:163845814"
/db_xref="GeneID:5824797"
/translation="MSAWATIADLTEDRVIYRDLQPCDASLPGLPALRTLLGLPANAT
PRKRDTAYARVILALARAAQALRNGPPLTHVVVIGDTENDRLLTLHLQALAEVAAYGF
IGVDRPVAPATLDWEGVVATATRWALVHEWAATLTARGVPWAQTAVLIDIDKTLLGPR
GRSDGAIDDARAEAALIVATDLLGDRFDRTVFRQYYTTLCRREWHAITLDNQDYTVAM
ALFATVDVFDLPAIEVQLAAGLSPTLLELLIAAQQVPVELQALRRQLIEQIEAGNPTP
FTQFRRAELVTTAARMADGRLTLSNELFTLGRRLQAQGALLMAASDKPAESALPSPEQ
QTAGLLPLHRTPALLD"
gene complement(276718..277767)
/locus_tag="Caur_0217"
/db_xref="GeneID:5824798"
CDS complement(276718..277767)
/locus_tag="Caur_0217"
/EC_number="1.2.1.11"
/note="KEGG: mka:MK1389 aspartate-semialdehyde
dehydrogenase;
TIGRFAM: aspartate-semialdehyde dehydrogenase;
PFAM: Semialdehyde dehydrogenase NAD - binding;
Semialdehyde dehydrogenase dimerisation region"
/codon_start=1
/transl_table=11
/product="aspartate-semialdehyde dehydrogenase"
/protein_id="YP_001633859.1"
/db_xref="GI:163845815"
/db_xref="InterPro:IPR000534"
/db_xref="InterPro:IPR005676"
/db_xref="InterPro:IPR012280"
/db_xref="GeneID:5824798"
/translation="MATIPVAVLGATGAVGQRFIQLLEGHPLFQVVALTGSERSAGKK
YHEVCRWVLDTPMPAAVANLTVLDADADLPAQLVFSALPSTVAGPIEQRLAAAGHIVC
SNASNHRMEPDVPLIIPEVNPDHLALIPVQRRRRGWSGAIVTNPNCTSTPATMVLRPL
LDTFGVRRMLLVSMQALSGAGYPGVPSYDVVDNVIPYIGGEEPKLEIEPQKMLGRLEG
ETIVPAGFTTSAHCNRVPVLEGHLVCLSIELERKADPAEIATVLSNFRALPQELRLPT
APEQPIIVRHEPDRPQPRRDRDAGRGMATVVGRIRPCSLFDIKLIALSHNTIRGAAGA
SILNAELMHAQGWLA"
misc_feature complement(276724..277767)
/locus_tag="Caur_0217"
/note="aspartate-semialdehyde dehydrogenase; Reviewed;
Region: PRK08664"
/db_xref="CDD:181530"
misc_feature complement(277381..277752)
/locus_tag="Caur_0217"
/note="Semialdehyde dehydrogenase, NAD binding domain;
Region: Semialdhyde_dh; smart00859"
/db_xref="CDD:197927"
misc_feature complement(order(277522..277527,277657..277662,
277723..277731))
/locus_tag="Caur_0217"
/note="NAD(P) binding pocket [chemical binding]; other
site"
/db_xref="CDD:133449"
misc_feature complement(276781..277299)
/locus_tag="Caur_0217"
/note="Semialdehyde dehydrogenase, dimerisation domain;
Region: Semialdhyde_dhC; pfam02774"
/db_xref="CDD:202385"
gene 278042..278425
/locus_tag="Caur_0218"
/db_xref="GeneID:5824799"
CDS 278042..278425
/locus_tag="Caur_0218"
/note="KEGG: rrs:RoseRS_1087 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633860.1"
/db_xref="GI:163845816"
/db_xref="GeneID:5824799"
/translation="MIDPLVQRLLEQVLDTPTKLHMLLMFHEHPRCELTAAAIAERLF
RDIWSVEQALEDLTAAGFLSVAQVTGGQPVYRYTPPPEWHEAIRRLVRSYNDPIERDM
IQRTIRDLSVYASFRRSELERFEFV"
misc_feature <278138..278347
/locus_tag="Caur_0218"
/note="Predicted transcriptional regulator
[Transcription]; Region: COG3355"
/db_xref="CDD:33163"
gene complement(278675..279451)
/locus_tag="Caur_0219"
/db_xref="GeneID:5824800"
CDS complement(278675..279451)
/locus_tag="Caur_0219"
/note="PFAM: Rare lipoprotein A;
KEGG: rca:Rcas_2307 rare lipoprotein A"
/codon_start=1
/transl_table=11
/product="rare lipoprotein A"
/protein_id="YP_001633861.1"
/db_xref="GI:163845817"
/db_xref="InterPro:IPR005132"
/db_xref="GeneID:5824800"
/translation="MQWSAGRLQIALVICLTGFFWLIANPVFTQPPYRVHLPLVVRPA
QNPLLSGEATFYLEADGSGSCLFDPIPGDKMVAAISYLNYGNADYCGAYVEVFGPQGS
VVVRIVDMCPDNPGCGQNHLDLSPEAFDRIAPRAWGRVPITWRVISPPLSGPVQFHLK
DGSNPWWLAFQVRHHRNPIARMEYRTPQGQWVQLNRTTYNYFIRQCQCANGELGPFTL
RITDIYGNVLTETVQFTTLSRSSNSPGELVSGTGQFPYGP"
sig_peptide complement(279362..279451)
/locus_tag="Caur_0219"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.910) with cleavage site probability 0.910 at
residue 30"
misc_feature complement(278687..279322)
/locus_tag="Caur_0219"
/note="Endoglucanase C-terminal domain/subunit and related
proteins [Carbohydrate transport and metabolism]; Region:
COG4305"
/db_xref="CDD:34027"
misc_feature complement(279020..279226)
/locus_tag="Caur_0219"
/note="Rare lipoprotein A (RlpA)-like double-psi
beta-barrel; Region: DPBB_1; pfam03330"
/db_xref="CDD:202595"
gene complement(279577..281388)
/locus_tag="Caur_0220"
/db_xref="GeneID:5824801"
CDS complement(279577..281388)
/locus_tag="Caur_0220"
/note="TIGRFAM: oligoendopeptidase F;
PFAM: peptidase M3A and M3B thimet/oligopeptidase F;
Oligopeptidase F;
KEGG: dge:Dgeo_1084 oligoendopeptidase F"
/codon_start=1
/transl_table=11
/product="oligoendopeptidase F"
/protein_id="YP_001633862.1"
/db_xref="GI:163845818"
/db_xref="InterPro:IPR001567"
/db_xref="InterPro:IPR004438"
/db_xref="InterPro:IPR006025"
/db_xref="InterPro:IPR013647"
/db_xref="GeneID:5824801"
/translation="MQTVKERSAIPDQYKWDPYSIFPSQEAWEAAITETDAMIASAAQ
FRGRLQEGPQVIGEFLALSEDILRNVGQITVFATMFYTVDTNDREASAMRDRAIGLQA
RASAALAFGEPELLAIGGDQLLAWAERDEHLNTYYHYFERLIARAAHIRSAEVEELLG
QVRDPFAAASAVHGVLANAELRFPPAYDSNGEAHEITQGTINALITHPDRTLRKNAWE
GYADAHIAVENTMAQCLAAGVKQNVFIARARRYASALEAALKPNFIPLEVFHNLIATF
ERHLPIWHRYWRVRRAALGVDELHVYDTKAPLATPLVVPYEQAVDWICEGMAPLGQEY
VQIMRRGLREQRWVDVYPNRGKRAGAFSTGAPGTHPFIMMSYNDDIFGLSTLAHELGH
SMHSYYTRRTQPVIYTNYGLFLAEVASNFNQALVRDYLFKTLTDRNAQIAIIEEAMSN
FHRYFFIMPTLARFELAIHQRAERGQPLTATIFNDLMADLFAEGYGTEVVVDRARVGN
TWAQFSTHLYANFYVYQYATGIAGAHALAAPIIAGEAGAAERYINEFLKAGGSRFPLD
ILRRAGVDLASPEPVERTFAVMASYVDRLEQLVASAD"
misc_feature complement(279595..281370)
/locus_tag="Caur_0220"
/note="oligoendopeptidase F; Region: pepF; TIGR00181"
/db_xref="CDD:161749"
misc_feature complement(279604..281217)
/locus_tag="Caur_0220"
/note="Peptidase family M3B Oligopeptidase F (PepF);
Region: M3B_PepF_3; cd09608"
/db_xref="CDD:189015"
misc_feature complement(order(279811..279813,279823..279825,
279841..279843,280141..280143,280213..280215,
280222..280227))
/locus_tag="Caur_0220"
/note="active site"
/db_xref="CDD:189015"
misc_feature complement(order(280141..280143,280213..280215,
280225..280227))
/locus_tag="Caur_0220"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:189015"
gene 281835..282563
/locus_tag="Caur_0221"
/db_xref="GeneID:5824802"
CDS 281835..282563
/locus_tag="Caur_0221"
/note="PFAM: Ion transport protein; Ion transport 2 domain
protein;
KEGG: vco:VC0395_1082 putative potassium channel protein"
/codon_start=1
/transl_table=11
/product="Ion transport 2 domain-containing protein"
/protein_id="YP_001633863.1"
/db_xref="GI:163845819"
/db_xref="InterPro:IPR003091"
/db_xref="InterPro:IPR005821"
/db_xref="InterPro:IPR013099"
/db_xref="GeneID:5824802"
/translation="MSSEQRATLLHRFERISELPMLLLSFGFLIIFLLVESNVFEATI
TLVLDGLLWLIWGIFLAELVAKLYLAPDRLHYLRSHWFEVIIIVLPFLRPLRLLWLPI
VLARLWKQSQRALRRKMPAFIGVSSLVMVLITATLMFIAERGSGGPITSFADAIWWAL
ATITTVGYGDTYPVTALGRGIATFLMIAGIALFGLLTANVAAFFVEEDTVDRSQADLA
MINERLARIEQLLAEIVQREARER"
misc_feature 282216..282437
/locus_tag="Caur_0221"
/note="Ion channel; Region: Ion_trans_2; pfam07885"
/db_xref="CDD:203792"
gene complement(282569..282644)
/locus_tag="Caur_R0003"
/note="tRNA-Arg4"
/db_xref="GeneID:5824803"
tRNA complement(282569..282644)
/locus_tag="Caur_R0003"
/product="tRNA-Arg"
/db_xref="GeneID:5824803"
gene complement(282707..283801)
/locus_tag="Caur_0222"
/db_xref="GeneID:5824804"
CDS complement(282707..283801)
/locus_tag="Caur_0222"
/note="PFAM: FAD-dependent pyridine nucleotide-disulphide
oxidoreductase;
KEGG: rba:RB5051 conserved hypothetical protein-putative
thioredoxin reductase"
/codon_start=1
/transl_table=11
/product="FAD-dependent pyridine nucleotide-disulfide
oxidoreductase"
/protein_id="YP_001633864.1"
/db_xref="GI:163845820"
/db_xref="InterPro:IPR000103"
/db_xref="InterPro:IPR000759"
/db_xref="InterPro:IPR001100"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:5824804"
/translation="MHYEELPLTAEHDVAIVGAGPIGLEVAVCLKQAGVDYIQFDAHQ
IGYTMTWWPRNTSFFSTTERLAIAGVPIQNNHQQRITGEEYLAYLRSVVELFDLHIQS
YEPVSDLIPDHEGFTLITRPHSGERRYRARRVVLAIGDMHYPHRLNIPGEDLPHVSHY
FRDPHDYFRRRLLIVGGKNSAVEAALRCWRAGAQVTLAYRRSQLDAQRVKHWLLPDFL
AQVEAGTIRFLARTTPVAIDSGGVVLAHTDEDGQPTTDHFYHPTDFVLLATGFRGDQR
LLEQAGVVLQGPNRVPLYNPATMETNVPGLYLAGTVAAGIQQRYTLFIENSHEHAGKI
TQALTGRWPSRLGDVATRNYQLSFEQIAAN"
misc_feature complement(282779..283765)
/locus_tag="Caur_0222"
/note="putative bacillithiol system oxidoreductase, YpdA
family; Region: Bthiol_YpdA; TIGR04018"
/db_xref="CDD:188533"
misc_feature complement(<283688..>283762)
/locus_tag="Caur_0222"
/note="Medium chain reductase/dehydrogenase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR; cl16912"
/db_xref="CDD:211475"
gene 284138..284686
/locus_tag="Caur_0223"
/db_xref="GeneID:5824805"
CDS 284138..284686
/locus_tag="Caur_0223"
/note="KEGG: rrs:RoseRS_2756 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633865.1"
/db_xref="GI:163845821"
/db_xref="GeneID:5824805"
/translation="MMLTTADIPQADVLWDVARVAEAIARGRMTAEEIGAYLGAKGQR
QGLYYMQAARIIGLIEISEQTETAQLTKFGLAFTRYNRADQRSALRRQLLRYEPTRSV
IAALRNAPEGLSRNDVARILQQLAPLAESTAQRRASTVTAWLTEIGLADWRDDRLYYC
GPSLPLPLPATPHNSASFAPGV"
gene complement(286667..287926)
/locus_tag="Caur_0224"
/db_xref="GeneID:5824806"
CDS complement(286667..287926)
/locus_tag="Caur_0224"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: rrs:RoseRS_2506 major facilitator superfamily MFS_1"
/codon_start=1
/transl_table=11
/product="major facilitator transporter"
/protein_id="YP_001633866.1"
/db_xref="GI:163845822"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:5824806"
/translation="MTSSSEAVLARYARRNFWLNVLDGSAFTFGISLVSRFTVLPLIV
ERLTDARWVQGLIPAIFFAGWLLPGLFTAPLVAAQPRRKPWVLIATIGERLPFLALGI
ILLTMPDLPASVLLVIVLSLYAIFATSAGLTSIAWQDLIARIIPAQRWGVFFGLQAGL
GGLFGIGGGALAAAILAQQPFPQSAGILALICFAAMVVSYVFLALTVEPAQAPIPTRP
FHVFLRGLGPLLRRDVAFRRYLFCRAAIAFGLTGHSFLTAAALERFHVPAADIGLFTG
VMMAAQAVGNIGLGALADRWGHKQVLVLSAGMGMAALVLALLAPVSTWFFIIFALVGA
AQAGYQLSGFTLVFAFSPPAERTTYIGVANLALAPVAAAGPVLVGVLATFTGYGMIFV
LLAIVGLIGMAMLHWQVAAPVRAEQVA"
gene 288301..289482
/locus_tag="Caur_0225"
/db_xref="GeneID:5824807"
CDS 288301..289482
/locus_tag="Caur_0225"
/note="PFAM: beta-lactamase domain protein;
SMART: Rhodanese domain protein;
KEGG: rca:Rcas_1187 beta-lactamase domain protein"
/codon_start=1
/transl_table=11
/product="beta-lactamase domain-containing protein"
/protein_id="YP_001633867.1"
/db_xref="GI:163845823"
/db_xref="InterPro:IPR001279"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:5824807"
/translation="MTFTPEQSTVTEISPRDLYARLLSAQPLFILDVRNEEEFKRMPV
EGHATLRTLNLPYFDFIEDEEAALARLPKDVEEFIVICAKGGASQYVAEVLNNHGYRA
VSLSEGMIGWGNYYDVRDVVKADWGRIVQIARPARGDLSFAVISDGQAALVDPLRHIQ
VYRELIENAGARLTAILDTHVHADHISGGPALSKETGAPYYIHPYDAIHPIDMLPAVI
AYEPLRDGQTFQIGQVRITTIWYPGHTLGQVNFLAETPDGGRYLFTGDGIFLRSFGRP
DLGGKGEAWTPILYRSMFEWLPRHLTDDTVILPAHFSTLDEDAGNGIFAAPFAQVRAQ
NDSLQPRSLEEFTSYVLSHLPVFPPEYVEIKRVNIGLVEACEGKASELELGKNICALA
G"
misc_feature 288337..288642
/locus_tag="Caur_0225"
/note="Member of the Rhodanese Homology Domain
superfamily. This CD includes predicted proteins with
rhodanese-like domains found N-terminal of the
metallo-beta-lactamase domain; Region: RHOD_Lact_B;
cd01523"
/db_xref="CDD:29086"
misc_feature 288544..288546
/locus_tag="Caur_0225"
/note="active site residue [active]"
/db_xref="CDD:29086"
misc_feature 288721..289233
/locus_tag="Caur_0225"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; smart00849"
/db_xref="CDD:197917"
misc_feature 288739..289236
/locus_tag="Caur_0225"
/note="Zn-dependent hydrolases, including glyoxylases
[General function prediction only]; Region: GloB; COG0491"
/db_xref="CDD:30837"
gene 289565..289813
/locus_tag="Caur_0226"
/db_xref="GeneID:5824808"
CDS 289565..289813
/locus_tag="Caur_0226"
/note="PFAM: SirA family protein;
KEGG: rrs:RoseRS_0815 SirA family protein"
/codon_start=1
/transl_table=11
/product="SirA family protein"
/protein_id="YP_001633868.1"
/db_xref="GI:163845824"
/db_xref="InterPro:IPR001455"
/db_xref="GeneID:5824808"
/translation="MPHFDQTLDVKGAKCPMPLVKSRKAITELPVGQVLQVISTDRGS
VADFQGWAKTAKNVELIAQETVQENGQELYVHYLRRTA"
misc_feature 289583..289804
/locus_tag="Caur_0226"
/note="SirA, YedF, and YeeD. Two-layered alpha/beta
sandwich domain. SirA (also known as UvrY, and YhhP)
belongs to a family of bacterial two-component response
regulators that controls secondary metabolism and
virulence. The other member of this...; Region:
SirA_YedF_YeeD; cd00291"
/db_xref="CDD:48205"
misc_feature order(289586..289591,289598..289600,289607..289618,
289622..289624)
/locus_tag="Caur_0226"
/note="CPxP motif; other site"
/db_xref="CDD:48205"
gene 289865..290440
/locus_tag="Caur_0227"
/db_xref="GeneID:5827898"
CDS 289865..290440
/locus_tag="Caur_0227"
/note="KEGG: rca:Rcas_1185 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633869.1"
/db_xref="GI:163845825"
/db_xref="GeneID:5827898"
/translation="MTTPMTETVDTQALLSRIAELEQRVAALEQSPAQSIEDRLAMVV
FSGDLDKAIAAFIIATGAASMGLEVSMFFTFWGISAVKKQKVFSGKNLLEQGFTAMLP
GKLGELGLSQMNFFGAGAQIIRNLMKQHDVASPEELFAMARELGVRMVVCDMSRELLG
IKDEELVDGLETGGVATFLGDAARAKVTLFI"
misc_feature 289973..290434
/locus_tag="Caur_0227"
/note="DsrE/DsrF-like family; Region: DrsE; cl00672"
/db_xref="CDD:213099"
gene 290538..290900
/locus_tag="Caur_0228"
/db_xref="GeneID:5827899"
CDS 290538..290900
/locus_tag="Caur_0228"
/note="PFAM: Rhodanese domain protein;
KEGG: rrs:RoseRS_2962 rhodanese domain protein"
/codon_start=1
/transl_table=11
/product="rhodanese domain-containing protein"
/protein_id="YP_001633870.1"
/db_xref="GI:163845826"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:5827899"
/translation="MFRQLFRRDVVQNHIATMTVQELKTQLDARAPMVLIDVRQPEEF
AYDGHVSGARLLPLPVLASRLNELPKDQPIVCICRSGNRSQVACEMLQRHGFTNVTNV
VGGMVAWQRAGYPVSRQH"
misc_feature 290601..290867
/locus_tag="Caur_0228"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cd00158"
/db_xref="CDD:29073"
misc_feature 290769..290771
/locus_tag="Caur_0228"
/note="active site residue [active]"
/db_xref="CDD:29073"
gene 290928..291437
/locus_tag="Caur_0229"
/db_xref="GeneID:5827900"
CDS 290928..291437
/locus_tag="Caur_0229"
/note="PFAM: protein of unknown function DUF442;
KEGG: rrs:RoseRS_0813 protein of unknown function DUF442"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633871.1"
/db_xref="GI:163845827"
/db_xref="InterPro:IPR005939"
/db_xref="GeneID:5827900"
/translation="MDTTMQHQAICNTLQHQTEVAPLRSYVVTENVLLAAQPQPEDWQ
RFVEAGYQTVLNIRSDPERAAQQAANARAAGLRYIHAPWPAYELEPEHLAEFARIVED
PATGKLVFHCRSATRVGLIWMLYRMVHQGWSREQAEAELRAAGYDDDAIETFDFCAGD
FFERVGSQA"
misc_feature 291009..291368
/locus_tag="Caur_0229"
/note="Protein tyrosine phosphatases (PTP) catalyze the
dephosphorylation of phosphotyrosine peptides; they
regulate phosphotyrosine levels in signal transduction
pathways. The depth of the active site cleft renders the
enzyme specific for phosphorylated Tyr; Region: PTPc;
cl00053"
/db_xref="CDD:213076"
gene 291449..293215
/locus_tag="Caur_0230"
/db_xref="GeneID:5827901"
CDS 291449..293215
/locus_tag="Caur_0230"
/note="TIGRFAM: sulfate transporter;
PFAM: Sulfate transporter/antisigma-factor antagonist
STAS; Xanthine/uracil/vitamin C permease; sulphate
transporter;
KEGG: rrs:RoseRS_0812 sulfate transporter"
/codon_start=1
/transl_table=11
/product="sulfate transporter"
/protein_id="YP_001633872.1"
/db_xref="GI:163845828"
/db_xref="InterPro:IPR001902"
/db_xref="InterPro:IPR002645"
/db_xref="InterPro:IPR006043"
/db_xref="InterPro:IPR011547"
/db_xref="GeneID:5827901"
/translation="MTPVSAHRPDVQAALLAMIYRYLPFLNWLRHYRREHLPSDVVAG
IVTAIMLIPQSMAYAQLAGLPPQIGLYASVAPLIVYALLGTSGQLSVGPVAITSLLVF
SGVSSLAEPGSARYIQLVLLLAFMVGAIKLTFGVLRLGAILNFISHPVLTAFTSASAL
IIAVGQLKYILGYRIGGEHIHETIGQAIAGLSQTNLVTLTIGLVSIGLLVFFRQGLRP
LLRRTGLPPLAITLIVSGAPLLTVILGILVAQTLFLDQTAGIAVVGAIPAGLSPISVP
AFSMADAQALLPTALTIVLVSVVESIAVAKALASKRRQAIDPDQELVALGAANITASF
FSGYPVTGGFARSVVNAQAGAITGLASLITALGIAVILLFFTPVFYYLPQAVLAATVI
VAVIGLVDLREPRRIWRTNRGDAFTWLITFLAVLTLGIETGIFVGVASALILYLWRTS
RPHIAIVGRLGDSEVYRNVERYQVKTWPHVVAVRVDESLYFANTRYLESALLQIVAER
PSVKHLVLIGSAINFIDSSALHTLEHLIDELRDAGVEFHLADIKGPVMDRLKQSELID
KIGHDHIHLTTHTAMLALGCQD"
misc_feature 291515..291763
/locus_tag="Caur_0230"
/note="Sulfate transporter N-terminal domain with GLY
motif; Region: Sulfate_tra_GLY; pfam13792"
/db_xref="CDD:205965"
misc_feature 291518..293188
/locus_tag="Caur_0230"
/note="high affinity sulphate transporter 1; Region: sulP;
TIGR00815"
/db_xref="CDD:162054"
misc_feature 291848..292699
/locus_tag="Caur_0230"
/note="Sulfate transporter family; Region: Sulfate_transp;
pfam00916"
/db_xref="CDD:144493"
misc_feature 292859..293179
/locus_tag="Caur_0230"
/note="Sulphate Transporter and Anti-Sigma factor
antagonist domain of SulP-like sulfate transporters, plays
a role in the function and regulation of the transport
activity, proposed general NTP binding function; Region:
STAS_SulP_like_sulfate_transporter; cd07042"
/db_xref="CDD:132913"
gene 293305..293715
/locus_tag="Caur_0231"
/db_xref="GeneID:5827902"
CDS 293305..293715
/locus_tag="Caur_0231"
/note="PFAM: Rhodanese domain protein;
KEGG: rrs:RoseRS_2962 rhodanese domain protein"
/codon_start=1
/transl_table=11
/product="rhodanese domain-containing protein"
/protein_id="YP_001633873.1"
/db_xref="GI:163845829"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:5827902"
/translation="MKYRFLLLLMIGLALLTACGTTTASTSTTSTPANITVARLKSML
DQNETFFLLDVRTPAEFVQDGRIAQATLIPLQELEQRLSELPTDKTIVCICRSGNRSS
VACNLLKERGYQAINVTGGMNEWKAAGYPTVFGQ"
sig_peptide 293305..293379
/locus_tag="Caur_0231"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.835 at
residue 25"
misc_feature 293422..293682
/locus_tag="Caur_0231"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cd00158"
/db_xref="CDD:29073"
misc_feature 293587..293589
/locus_tag="Caur_0231"
/note="active site residue [active]"
/db_xref="CDD:29073"
gene complement(294090..294485)
/locus_tag="Caur_0232"
/db_xref="GeneID:5827903"
CDS complement(294090..294485)
/locus_tag="Caur_0232"
/note="PFAM: protein of unknown function DUF35;
KEGG: rca:Rcas_0984 protein of unknown function DUF35"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633874.1"
/db_xref="GI:163845830"
/db_xref="InterPro:IPR002878"
/db_xref="GeneID:5827903"
/translation="MKIARHWRDRVPRYRLEGQRHRYTGEIRFPPHPPALDEDPNDWE
PYQLSGRGEIYSFSVLRQAPEGFASFGVYPVALVRLEEGPLVTAQLTDCDEADLAIGM
PVEMVTRRLMDSGEDGVLVYGYKFRPRLV"
misc_feature complement(<294387..294464)
/locus_tag="Caur_0232"
/note="Rubredoxin-like zinc ribbon domain (DUF35_N);
Region: DUF35_N; pfam12172"
/db_xref="CDD:204842"
misc_feature complement(294102..294449)
/locus_tag="Caur_0232"
/note="Predicted nucleic-acid-binding protein containing a
Zn-ribbon [General function prediction only]; Region:
COG1545"
/db_xref="CDD:31734"
misc_feature complement(294159..294353)
/locus_tag="Caur_0232"
/note="DUF35 OB-fold domain; Region: DUF35; pfam01796"
/db_xref="CDD:201978"
gene complement(294482..295108)
/locus_tag="Caur_0233"
/db_xref="GeneID:5827904"
CDS complement(294482..295108)
/locus_tag="Caur_0233"
/note="KEGG: rrs:RoseRS_2432 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633875.1"
/db_xref="GI:163845831"
/db_xref="GeneID:5827904"
/translation="MIQEMVNGSIAVLTRPSVQSFEQHERDNLVWALIYAVIASVING
ILAAITAPLRVGELRAQLETQGVPPDAIEAAIAQQGNPIIAIFAGIFGTIIGSLIIWG
FIYLLGRAFGGTGSFGELAWGLSLFSSPLAVAQSIVSVIPLVGDILLLGLSIYGVYLT
YLAIQSGMNLPSQKALYIAIILLVITLLFLCVTVGLAAIVGLIGGLAP"
misc_feature complement(294533..295075)
/locus_tag="Caur_0233"
/note="Yip1 domain; Region: Yip1; cl12048"
/db_xref="CDD:209431"
gene complement(295186..296352)
/locus_tag="Caur_0234"
/db_xref="GeneID:5827905"
CDS complement(295186..296352)
/locus_tag="Caur_0234"
/note="KEGG: rca:Rcas_0983 acetyl-CoA
acetyltransferase-like protein"
/codon_start=1
/transl_table=11
/product="acetyl-CoA acetyltransferase-like protein"
/protein_id="YP_001633876.1"
/db_xref="GI:163845832"
/db_xref="GeneID:5827905"
/translation="MTNVYIAGIGATAVGEHYRRGLADLVSEAARAALASAPEIAPHQ
IGALYVGSAFSEELYGQSQAGAYLASILGLSPSIPAYRVEAAGASGALALYQAVQAVQ
NGVAVALVIGVDKVTDHLEDEIEAAQAMAADSTEEALHGVTLTAQWAMLMRRYMHEYG
YTADAFAPFPINAHANGVHNPLALYRFAIDANKYRKAAQIASPLNMLDCSTLADGAAA
LIVVGEQIARELDRPRIRIAGSAVATDHPALHRRRNPLDLSAARASAHIALGRAHLGV
GDVQVWELTDPHGIAATLALEAIGCYEPGTAPRYAAEGAITPTGKTPIATFGGYKARG
DVGGASGVYQVIELTRQLSGQAGPTQVSNARIGLSQSLGGIGATAVSHVLIRES"
misc_feature complement(295192..296352)
/locus_tag="Caur_0234"
/note="acetyl-CoA acetyltransferase; Provisional; Region:
PRK06064"
/db_xref="CDD:180378"
misc_feature complement(295204..296223)
/locus_tag="Caur_0234"
/note="Thiolase domain associated with sterol carrier
protein (SCP)-x isoform and related proteins; SCP-2 has
multiple roles in intracellular lipid circulation and
metabolism. The N-terminal presequence in the SCP-x
isoform represents a peroxisomal...; Region:
SCP-x_thiolase; cd00829"
/db_xref="CDD:29416"
misc_feature complement(order(295348..295350,295498..295500,
296092..296094))
/locus_tag="Caur_0234"
/note="active site"
/db_xref="CDD:29416"
gene complement(296371..297420)
/locus_tag="Caur_0235"
/db_xref="GeneID:5827906"
CDS complement(296371..297420)
/locus_tag="Caur_0235"
/note="TIGRFAM: hydroxymethylglutaryl-CoA synthase;
PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain;
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain
protein;
KEGG: rca:Rcas_0982 putative hydroxymethylglutaryl-CoA
synthase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633877.1"
/db_xref="GI:163845833"
/db_xref="InterPro:IPR004656"
/db_xref="InterPro:IPR013528"
/db_xref="InterPro:IPR013747"
/db_xref="GeneID:5827906"
/translation="MMKPQHPVGIVGYGAYIPRYRIAAREIARVWTDGQSGTPIEAKS
VPGPDEDTITMSIEAARNALARAAIPATALGAVWIGSESHPYSVKPSGTVVADALGAG
PWVSAADWEFACKAGSEALTAAMALVGSGMQRYALAVGADTAQGRPGDALEYTASAGA
AALIVGPASEALATIDATLSYVTDTPDFYRRADRPYPVHGNRFTGEPAYFHQIQSAAT
ELLRHLNRTAADFTYAVFHQPNAKFPQAVAKRLGFTDKQIAPGLLSPQIGNTYSGAAL
LGLCAILDVAQPGETIFMTTYGSGAGSDAYALTVTEAVLERRERAPLVAAYLQRAVMI
DYAIYAKWRGKLVMG"
misc_feature complement(296374..297405)
/locus_tag="Caur_0235"
/note="hypothetical protein; Provisional; Region:
PRK04262"
/db_xref="CDD:179804"
misc_feature complement(296497..297402)
/locus_tag="Caur_0235"
/note="'initiating' condensing enzymes are a subclass of
decarboxylating condensing enzymes, including
beta-ketoacyl [ACP] synthase, type III and polyketide
synthases, type III, which include chalcone synthase and
related enzymes. They are characterized by the...; Region:
init_cond_enzymes; cd00827"
/db_xref="CDD:29414"
misc_feature complement(order(296521..296523,296872..296883,
296983..296985,297040..297045,297052..297057,
297064..297066,297091..297105,297109..297111,
297133..297135,297142..297144,297169..297171,
297175..297177))
/locus_tag="Caur_0235"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29414"
misc_feature complement(order(296614..296616,296710..296712,
297079..297081))
/locus_tag="Caur_0235"
/note="active site"
/db_xref="CDD:29414"
gene complement(297617..298936)
/locus_tag="Caur_0236"
/db_xref="GeneID:5827907"
CDS complement(297617..298936)
/locus_tag="Caur_0236"
/EC_number="1.1.1.88"
/note="TIGRFAM: hydroxymethylglutaryl-CoA reductase,
degradative;
KEGG: rca:Rcas_0981 hydroxymethylglutaryl-CoA reductase,
degradative"
/codon_start=1
/transl_table=11
/product="hydroxymethylglutaryl-CoA reductase"
/protein_id="YP_001633878.1"
/db_xref="GI:163845834"
/db_xref="InterPro:IPR002202"
/db_xref="InterPro:IPR004553"
/db_xref="GeneID:5827907"
/translation="MGTKSSRLQGFYQLNPFERLQMVKSFDGLVDEDLRALHGGHGGA
LTIERADKMIENVIGTYNLPLGIATNFRINGRDYLIPMVVEEPSIVAGASYAARMVRD
GGGFETSSTEPLMIGQVQLVNVRDPDQARQTILSRKEEILALANAQSRSLVSLGGGAR
DVEVRFFPTSPMGPMLVVHLIIDCRDAMGANAVNTMAEAVAPLLAEMTGGKVYLRILS
NLTDRRLARARCVVPAASLARDGLSGEEVVEGILWAYAFAAVDPYRAATHNKGIMNGI
DPVLVATGNDWRAVEAGAHAYASRNGHYTSLSHWERDAQGDLVGTLEMPLAVGIVGGA
TKVHPTAQAALKLLGVRSAAELAEVCVAAGLANNLAAMRALACEGIQQGHMSLHARQI
AMAAGASGTLVDEVARRMVAERNIKLARAEEIIAELEGRTIGNPTHN"
misc_feature complement(297689..298909)
/locus_tag="Caur_0236"
/note="Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA)
reductase (HMGR); Region: HMG-CoA_reductase_classII;
cd00644"
/db_xref="CDD:153082"
misc_feature complement(order(297752..297757,297764..297769,
297773..297778,297782..297784,297794..297805,
297812..297814,297914..297919,297923..297925,
297935..297937,298025..298027,298031..298033,
298040..298042,298052..298054,298061..298066,
298070..298081,298091..298096,298106..298108,
298115..298120,298127..298129,298136..298141,
298145..298150,298154..298159,298166..298171,
298175..298183,298190..298192,298280..298300,
298400..298402,298406..298408,298436..298438,
298577..298579,298583..298585,298589..298591,
298664..298690,298736..298780,298784..298789,
298796..298798,298820..298822,298877..298882,
298889..298891,298904..298906))
/locus_tag="Caur_0236"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:153082"
misc_feature complement(order(297785..297787,297938..297946,
298070..298072,298079..298081,298127..298129,
298136..298138,298280..298282,298286..298288,
298355..298357,298361..298384,298472..298474,
298481..298483,298679..298681))
/locus_tag="Caur_0236"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:153082"
misc_feature complement(order(297785..297787,298079..298081,
298127..298129,298679..298681))
/locus_tag="Caur_0236"
/note="catalytic residues [active]"
/db_xref="CDD:153082"
misc_feature complement(order(297797..297799,297812..297814,
297824..297826,298115..298117,298124..298129,
298133..298138,298145..298147,298679..298681))
/locus_tag="Caur_0236"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:153082"
misc_feature complement(297749..297796)
/locus_tag="Caur_0236"
/note="flexible flap; other site"
/db_xref="CDD:153082"
gene 299078..299800
/locus_tag="Caur_0237"
/db_xref="GeneID:5827908"
CDS 299078..299800
/locus_tag="Caur_0237"
/note="KEGG: rrs:RoseRS_0432 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633879.1"
/db_xref="GI:163845835"
/db_xref="GeneID:5827908"
/translation="MLTYGTIEYVIYKRLFAFIISLFYLSACATTPLPPLLSDLLTRS
PSGTQEMIAFLYYDEQGARLVSSLSVSADRPLPLDPPERQVWIGGLDPPADIPLTNEA
GVQYGLVIAQGNWQSAGNYGPGGQWPYTLVTPSFQSITPDRVELAQLFNDNRYEGRLV
QMRAALLLADGTSLLVDSIGAGGIPAAGARQVKLLHGESDQAALSQLQARGNVRYGYV
DVIGVWRQGRLEPLLIRPLPSE"
gene complement(299778..301706)
/locus_tag="Caur_0238"
/db_xref="GeneID:5827909"
CDS complement(299778..301706)
/locus_tag="Caur_0238"
/note="KEGG: sfu:Sfum_1007 PAS/PAC sensor hybrid histidine
kinase;
TIGRFAM: PAS sensor protein;
PFAM: response regulator receiver; ATP-binding region
ATPase domain protein; histidine kinase A domain protein;
PAS fold-3 domain protein; PAS fold domain protein;
SMART: PAS domain containing protein; PAC
repeat-containing protein"
/codon_start=1
/transl_table=11
/product="PAS sensor protein"
/protein_id="YP_001633880.1"
/db_xref="GI:163845836"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000700"
/db_xref="InterPro:IPR001610"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR013655"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:5827909"
/translation="MPDDTILLLLANAANRELLRDWLGHHYQTIIADSEADLQRSFQL
CIVDGPALATFEAAIQARRAAAYPIFLPFLLVTTRGDVKYHTHHLWQTVDELVISPIQ
KVELQARIEILLRARRLALEVSRLQQAMLSSTQTWLQLAVQSAQIGLWEWDLQTNRVF
FSPEWKAQIGYAADELVDSLTVWEELIHPDDRERCLNLLYRYLHRPWPDFALEFRLRH
KNGSYRWIRSQAALIYDQHGRPTHMLGAHFDLTERKQMEEEQQQLAEQLFQSQKLEAI
GALTSGIAHDLNNLLVPIIGFAEMGMLEVTPDNPLYSDFDQIRAAGIRATALTRRILT
FSRQQRMEMKPIHISRVISDFVAILRRIIGERIDIQLQLASDLPPVQADVSQIEQILL
NLVINARDAIEGNGTITITTAFVSPEDTDFPWPADVPPGDYIALQISDTGCGIDSAIR
SRIFEPFFTTKPSGKGTGLGLATVAAIVKQHHGYIDVQSLPGQGATFTVYLPALKDGA
AVSEDVAFSKDQLFGHETVLVVEDEPAVLHLIASALRLHGYQVIEATDAQYGLGLAAS
HQGTIDLLITDVMLPTLNGDELYRQLRGLYPQARVLYISAYVDSEHVGPDVTPILAKP
FTLQRLLQQVRAILTAAV"
misc_feature complement(300957..301265)
/locus_tag="Caur_0238"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature complement(300966..301235)
/locus_tag="Caur_0238"
/note="PAS fold; Region: PAS_3; pfam08447"
/db_xref="CDD:203948"
misc_feature complement(order(301044..301046,301059..301061,
301140..301151,301194..301196,301212..301214,
301224..301226))
/locus_tag="Caur_0238"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature complement(order(301017..301019,301023..301025,
301110..301115,301122..301124,301146..301148,
301158..301160))
/locus_tag="Caur_0238"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature complement(300696..300890)
/locus_tag="Caur_0238"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(300180..>300887)
/locus_tag="Caur_0238"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature complement(order(300711..300713,300723..300725,
300732..300734,300744..300746,300753..300755,
300765..300767,300816..300818,300825..300827,
300837..300839,300846..300848,300858..300860,
300870..300872))
/locus_tag="Caur_0238"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(300852..300854)
/locus_tag="Caur_0238"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(300204..300548)
/locus_tag="Caur_0238"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(300216..300218,300222..300227,
300240..300242,300246..300248,300294..300305,
300372..300377,300381..300383,300387..300389,
300393..300395,300507..300509,300516..300518,
300528..300530))
/locus_tag="Caur_0238"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(300516..300518)
/locus_tag="Caur_0238"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(300297..300299,300303..300305,
300375..300377,300381..300383))
/locus_tag="Caur_0238"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature complement(299802..300128)
/locus_tag="Caur_0238"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(299793..300125)
/locus_tag="Caur_0238"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(299835..299840,299847..299849,
299892..299894,299952..299954,299976..299978,
300111..300116))
/locus_tag="Caur_0238"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(299976..299978)
/locus_tag="Caur_0238"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(299952..299960,299964..299969))
/locus_tag="Caur_0238"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(299832..299840)
/locus_tag="Caur_0238"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(301866..303314)
/locus_tag="Caur_0239"
/db_xref="GeneID:5827910"
CDS complement(301866..303314)
/locus_tag="Caur_0239"
/EC_number="2.7.11.1"
/note="KEGG: rca:Rcas_0671 putative circadian clock
protein, KaiC;
PFAM: Circadian clock protein KaiC central region; KaiA
binding;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="non-specific serine/threonine protein kinase"
/protein_id="YP_001633881.1"
/db_xref="GI:163845837"
/db_xref="InterPro:IPR001553"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR004504"
/db_xref="InterPro:IPR010624"
/db_xref="InterPro:IPR014774"
/db_xref="InterPro:IPR015140"
/db_xref="GeneID:5827910"
/translation="MEQAATQRLATGIPGLDEICGGGLVPRYAYLVRGGPGTGKTTLG
LHFLAAGAANGETTLFISLEETESKIRWNAAQTGINLNQVHILDLSPSSDFFANTQIY
DIFSPAEVEREPITRQIVETVQRLQPTRVFLDSITQFRYLTPDTFQFRKQVISFLRFL
AEQRTTVVFSAENSAAFPDDDLQYIADGIISLELTNTGRYLTVSKMRGSSFVSGRHAM
RLTTQGLQVFPRIIPTPLVAGHAFTLIPSGVPELDELLNGGVERGTITLITGPSGVGK
TTLGFQFMKEAASRGERSMVFSFEEEIEIMQQRCEAVNIPVRAMQKQQLLRIEKIEPL
QYNPAEFAQHVRYFIEQEQIKVVMIDSVTGYRLCMHGEDLISQLHALSKYLQSRGVTV
FLIMDTTDIVGDFKVTEIGASYLGDNIIFLRFLEIEGELRKAIGVLKKRLGDFEKTLR
EFAISRYGIKVGKPLTNLRGILSGMPTWVDKA"
misc_feature complement(301884..303311)
/locus_tag="Caur_0239"
/note="circadian clock protein KaiC; Reviewed; Region:
PRK09302"
/db_xref="CDD:181771"
misc_feature complement(302625..303284)
/locus_tag="Caur_0239"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(order(302910..302915,303126..303131,
303135..303137))
/locus_tag="Caur_0239"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29986"
misc_feature complement(302913..302927)
/locus_tag="Caur_0239"
/note="Walker B motif; other site"
/db_xref="CDD:29986"
misc_feature complement(<302478..>302579)
/locus_tag="Caur_0239"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(301986..302522)
/locus_tag="Caur_0239"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(302484..302507)
/locus_tag="Caur_0239"
/note="G1 box; other site"
/db_xref="CDD:206746"
misc_feature complement(order(302484..302492,302502..302507))
/locus_tag="Caur_0239"
/note="Walker A motif; other site"
/db_xref="CDD:29986"
misc_feature complement(order(302232..302237,302418..302423,
302427..302429,302484..302492,302502..302504))
/locus_tag="Caur_0239"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29986"
misc_feature complement(302481..302501)
/locus_tag="Caur_0239"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206746"
misc_feature complement(302235..302249)
/locus_tag="Caur_0239"
/note="Walker B motif; other site"
/db_xref="CDD:29986"
gene 303685..304764
/locus_tag="Caur_0240"
/db_xref="GeneID:5827911"
CDS 303685..304764
/locus_tag="Caur_0240"
/note="PFAM: creatinase; peptidase M24;
KEGG: sth:STH1865 Xaa-Pro dipeptidase"
/codon_start=1
/transl_table=11
/product="peptidase M24"
/protein_id="YP_001633882.1"
/db_xref="GI:163845838"
/db_xref="InterPro:IPR000587"
/db_xref="InterPro:IPR000994"
/db_xref="InterPro:IPR001131"
/db_xref="InterPro:IPR001714"
/db_xref="GeneID:5827911"
/translation="MTNRLQQLRATLAARELPAMLLTAPTSRRYISGFTGSAGALLIS
AEAAFLLTDGRYLIRAAAEAPHFTLREVRPPARPMTALIADLASELGIKRLGFEAAVM
TVAEHRQYTAALGNAIELVPTENIVEELRMVKDEEEIALLRRAAAITDAALAAVLPAL
TPTMTEREAAWRLEVALHDLGAEGPSFPIIVAAGRNSARPHHTPGDDVLGEGQPIIID
MGARLDGYHADLTRTIVLGQPDDTFRAVYAATLKAQQAAMQALRPGLPWSEADAIARR
VIGEAGYAEGIAHSLGHGVGLVIHEAPWLRITAPDAPPSPPLQAGMVTSIEPGIYLPE
WGGVRIEDLVLITTNGYEVLSQAPK"
misc_feature 303685..304761
/locus_tag="Caur_0240"
/note="Xaa-Pro aminopeptidase [Amino acid transport and
metabolism]; Region: PepP; COG0006"
/db_xref="CDD:30356"
misc_feature 303694..304083
/locus_tag="Caur_0240"
/note="Creatinase/Prolidase N-terminal domain; Region:
Creatinase_N; pfam01321"
/db_xref="CDD:201727"
misc_feature 304174..304737
/locus_tag="Caur_0240"
/note="Similar to Prolidase and Aminopeptidase P. The
members of this subfamily presumably catalyse hydrolysis
of Xaa-Pro dipeptides and/or release of any N-terminal
amino acid, including proline, that is linked with
proline; Region: APP-like; cd01092"
/db_xref="CDD:29977"
misc_feature order(304285..304287,304336..304338,304369..304371,
304561..304563,304663..304665,304705..304707)
/locus_tag="Caur_0240"
/note="active site"
/db_xref="CDD:29977"
gene 305149..307278
/locus_tag="Caur_0241"
/db_xref="GeneID:5827870"
CDS 305149..307278
/locus_tag="Caur_0241"
/EC_number="6.5.1.2"
/note="KEGG: rca:Rcas_0877 DNA ligase, NAD-dependent;
TIGRFAM: DNA ligase, NAD-dependent;
PFAM: helix-hairpin-helix motif; BRCT domain protein;
zinc-finger NAD-dependent DNA ligase C4-type;
NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase
adenylation;
SMART: Helix-hairpin-helix DNA-binding class 1;
NAD-dependent DNA ligase"
/codon_start=1
/transl_table=11
/product="DNA ligase"
/protein_id="YP_001633883.1"
/db_xref="GI:163845839"
/db_xref="InterPro:IPR000445"
/db_xref="InterPro:IPR001357"
/db_xref="InterPro:IPR001679"
/db_xref="InterPro:IPR003583"
/db_xref="InterPro:IPR004149"
/db_xref="InterPro:IPR004150"
/db_xref="InterPro:IPR013839"
/db_xref="InterPro:IPR013840"
/db_xref="GeneID:5827870"
/translation="MSHTTVADRINELRSLIRRYDYHYYVLDDPIVSDAEYDALMTEL
RALEAAHPELITPDSPTQRVSGTPASQFAKVQHPQPMLSLGNAFTKADLLAWRDRVLR
LLGPDAIVAYVVEPKIDGLAVALTYRDGRLVQGATRGDGEVGEDVTANLRTIGSIPLT
LQATSTPQDDDLPTTLPTTIEVRGEVYMRTADFETLNDRLAAAGEKIFANPRNAAAGS
LRQKDPTITAARPLRFFAYGVGVVEGISLSSQWQTLRYLRALGFPVNQDVRRFTDFAE
VLAYCEAWMAKRDDLPYEADGVVIKIDDFAQQRELGVVGRDPRWAIAFKFPAREAITR
LLDITVNVGRTGVVTPNAELEPVQIGGVTVRNASLHNADYIAQRDIRIGDYVIVKRAG
DVIPYVVGPVIARRDGSERPWQFPTHCPACGSPLEREEGEAAWRCNNFSICPAQLVRR
VEHFVSRSALDIVGMGERQAELFVQRGLIRDVADIFFLKADQLAELEGFGPKRIANLL
AAIDAARQRPLDRLLVGLGIRYVGTVAAQTLVAALGSLDAIMAARQEELEQIPGIGPV
VAASIVDFFSRPANRALIEKLRAAGVQMGGVSGPTRQSDTLAGKTFVLTGTLPSLSRE
QASALIVAHGGKVTDSVSKKTSYVVAGANAGSKLAKALQLGIPVIDEAGLLALIGTTA
EPPPSPPPPPPETNTDGNQLLLPLDGE"
misc_feature 305158..307185
/locus_tag="Caur_0241"
/note="NAD-dependent DNA ligase LigA; Validated; Region:
ligA; PRK07956"
/db_xref="CDD:181181"
misc_feature 305170..306132
/locus_tag="Caur_0241"
/note="NAD+ dependent DNA ligase adenylation domain. DNA
ligases catalyze the crucial step of joining the breaks in
duplex DNA during DNA replication, repair and
recombination, utilizing either ATP or NAD(+) as a
cofactor, but using the same basic reaction...; Region:
LIGANc; cd00114"
/db_xref="CDD:29013"
misc_feature order(305398..305400,305491..305493,305497..305499,
305560..305562,305701..305703,305857..305859,
306043..306045,306049..306051)
/locus_tag="Caur_0241"
/note="nucleotide binding pocket [chemical binding]; other
site"
/db_xref="CDD:29013"
misc_feature order(305497..305499,305503..305508)
/locus_tag="Caur_0241"
/note="K-X-D-G motif; other site"
/db_xref="CDD:29013"
misc_feature 305497..305499
/locus_tag="Caur_0241"
/note="catalytic site [active]"
/db_xref="CDD:29013"
misc_feature 306139..306384
/locus_tag="Caur_0241"
/note="NAD-dependent DNA ligase OB-fold domain; Region:
DNA_ligase_OB; pfam03120"
/db_xref="CDD:145978"
misc_feature 306400..306483
/locus_tag="Caur_0241"
/note="NAD-dependent DNA ligase C4 zinc finger domain;
Region: DNA_ligase_ZBD; pfam03119"
/db_xref="CDD:202542"
misc_feature 306781..306870
/locus_tag="Caur_0241"
/note="Helix-hairpin-helix motif; Region: HHH; pfam00633"
/db_xref="CDD:109681"
misc_feature 306973..307182
/locus_tag="Caur_0241"
/note="Breast Cancer Suppressor Protein (BRCA1),
carboxy-terminal domain. The BRCT domain is found within
many DNA damage repair and cell cycle checkpoint proteins.
The unique diversity of this domain superfamily allows
BRCT modules to interact forming homo...; Region: BRCT;
cd00027"
/db_xref="CDD:28909"
misc_feature order(307018..307020,307030..307032,307039..307041,
307048..307050,307054..307056)
/locus_tag="Caur_0241"
/note="Dimer interface [polypeptide binding]; other site"
/db_xref="CDD:28909"
misc_feature order(307165..307167,307177..307179)
/locus_tag="Caur_0241"
/note="BRCT sequence motif; other site"
/db_xref="CDD:28909"
gene complement(308385..309560)
/locus_tag="Caur_0242"
/db_xref="GeneID:5827871"
CDS complement(308385..309560)
/locus_tag="Caur_0242"
/note="KEGG: rca:Rcas_2266 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633884.1"
/db_xref="GI:163845840"
/db_xref="InterPro:IPR006025"
/db_xref="GeneID:5827871"
/translation="MAGNQNDLRRFGTALLLGVAAGFAARYYLETRARNSTRPASGLI
DWEQARQAALRLSQWEQAPVDNRAFRREQYARMVALSEPLIADYLGVRLPEPVSRIFV
FDRREWLEANIVSFSQLFRPIEEMYEKNGGGRGALGVLMNDVSSKLLGVQIGGLLGYL
AQRVLGQYDLSLLSAEATGGSLYFVEPNIARVQQQLGLSDEDFRLWITLHEMTHAFEF
EAYPWVRTYFRELLEQNFALVSGQMLSSGNSLVDMLMRLLQGIGSGQHWIETVLTPEQ
RAVFDRIQALMSLIEGYGNHVMNAVGRRLLPSFNQIEQQIAQRQRQRTMLDQMVFRLT
GLDLKLAQYQQGEAFVNAVVAARGIQFASRVWERPENLPSMDEIRNPGQWIVRMDRQ"
misc_feature complement(308394..309431)
/locus_tag="Caur_0242"
/note="uncharacterized protein, coenzyme F420 biosynthesis
associated; Region: DUF2342_F420; TIGR03883"
/db_xref="CDD:188399"
gene complement(309663..311531)
/locus_tag="Caur_0243"
/db_xref="GeneID:5827872"
CDS complement(309663..311531)
/locus_tag="Caur_0243"
/EC_number="2.7.7.4"
/note="KEGG: mta:Moth_2503 selenocysteine-specific
translation elongation factor;
TIGRFAM: selenocysteine-specific translation elongation
factor; small GTP-binding protein;
PFAM: protein synthesis factor GTP-binding; elongation
factor Tu domain 2 protein; Elongation factor SelB winged
helix 2; Elongation factor SelB winged helix 3"
/codon_start=1
/transl_table=11
/product="selenocysteine-specific translation elongation
factor"
/protein_id="YP_001633885.1"
/db_xref="GI:163845841"
/db_xref="InterPro:IPR000795"
/db_xref="InterPro:IPR004161"
/db_xref="InterPro:IPR004535"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR015190"
/db_xref="InterPro:IPR015191"
/db_xref="GeneID:5827872"
/translation="MQEFLAMFVIGTAGHVDHGKSTLVKALTGIDPDRLREEQQREMT
IDLGFAWLTLPGGREVSLIDVPGHERFIKNMLAGVGGIDAVLLVIAADEAVMPQTREH
LAIIDLLAIRHGIVVLSKVDLVDADWLELVREEVREALAGSTLASAPIVPVSARTGAG
LAELLLTLDRLLDTLPARDQVRGVPRLAIDRSFTITGFGTVVTGTLRDGVLSVGQEVE
LLPPGLRARIRGLQSHQRPIDQGKPGMRVAVNLAGVHHRDIRRGHVLTLPGALTPTTL
LDARVRVVSDVAPIAHNAALDLFIGSSEAPCRLTLLDTDELSAGTEGWVQIRLTVPVV
AAVGDRFILRTPSPSRTVAGGVVIDPHPPRHRRFRSEVIAALTLRSQGSPAERLRQTL
ADGRPRLRTESLAAAGITDTEAEAVLVALVTEGHLVVLGDDVLISSAGWASLRATLRD
LLASYHQRFPLRRGMSREEVRQRLQLTPRLWQSVLATTMAEGWLSADETTVRLTNFTP
QPTADQQRALNRYISALAHMPPAPPPAELDSELLAWACDNGLLVKIASDLYLLPATCT
AMTMWVRTTVETQGGVTVAAFRDHFGVSRRYAVAFLEYLDEQRITRRVGDTRILVR"
misc_feature complement(309672..311507)
/locus_tag="Caur_0243"
/note="selenocysteinyl-tRNA-specific translation factor;
Provisional; Region: PRK10512"
/db_xref="CDD:182508"
misc_feature complement(311067..311507)
/locus_tag="Caur_0243"
/note="SelB, the dedicated elongation factor for delivery
of selenocysteinyl-tRNA to the ribosome; Region: SelB;
cd04171"
/db_xref="CDD:206734"
misc_feature complement(311481..311504)
/locus_tag="Caur_0243"
/note="G1 box; other site"
/db_xref="CDD:206734"
misc_feature complement(order(311127..311129,311139..311141,
311253..311258,311325..311330,311385..311390,
311457..311462,311469..311471,311478..311483,
311493..311495,311499..311501))
/locus_tag="Caur_0243"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206734"
misc_feature complement(order(311067..311072,311166..311168,
311172..311177,311478..311495))
/locus_tag="Caur_0243"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206734"
misc_feature complement(311388..311435)
/locus_tag="Caur_0243"
/note="Switch I region; other site"
/db_xref="CDD:206734"
misc_feature complement(311400..311402)
/locus_tag="Caur_0243"
/note="G2 box; other site"
/db_xref="CDD:206734"
misc_feature complement(311331..311342)
/locus_tag="Caur_0243"
/note="G3 box; other site"
/db_xref="CDD:206734"
misc_feature complement(311280..311336)
/locus_tag="Caur_0243"
/note="Switch II region; other site"
/db_xref="CDD:206734"
misc_feature complement(311166..311177)
/locus_tag="Caur_0243"
/note="G4 box; other site"
/db_xref="CDD:206734"
misc_feature complement(311067..311072)
/locus_tag="Caur_0243"
/note="G5 box; other site"
/db_xref="CDD:206734"
misc_feature complement(310740..310979)
/locus_tag="Caur_0243"
/note="selB_II: this subfamily represents the domain of
elongation factor SelB, homologous to domain II of EF-Tu.
SelB may function by replacing EF-Tu. In prokaryotes, the
incorporation of selenocysteine as the 21st amino acid,
encoded by TGA, requires several...; Region: selB_II;
cd03696"
/db_xref="CDD:58087"
misc_feature complement(310461..310700)
/locus_tag="Caur_0243"
/note="This family represents the domain of elongation
factor SelB, homologous to domain III of EF-Tu. SelB may
function by replacing EF-Tu. In prokaryotes, the
incorporation of selenocysteine as the 21st amino acid,
encoded by TGA, requires several elements:...; Region:
selB_III; cd04094"
/db_xref="CDD:58076"
misc_feature complement(310023..310190)
/locus_tag="Caur_0243"
/note="Elongation factor SelB, winged helix; Region:
SelB-wing_2; pfam09106"
/db_xref="CDD:204137"
misc_feature complement(309672..309818)
/locus_tag="Caur_0243"
/note="Elongation factor SelB, winged helix; Region:
SelB-wing_3; pfam09107"
/db_xref="CDD:204138"
gene 311572..312168
/locus_tag="Caur_0244"
/db_xref="GeneID:5827873"
CDS 311572..312168
/locus_tag="Caur_0244"
/EC_number="3.2.2.21"
/note="PFAM: HhH-GPD family protein;
KEGG: sus:Acid_6307 DNA-3-methyladenine glycosylase II"
/codon_start=1
/transl_table=11
/product="DNA-3-methyladenine glycosylase II"
/protein_id="YP_001633886.1"
/db_xref="GI:163845842"
/db_xref="InterPro:IPR003265"
/db_xref="GeneID:5827873"
/translation="MEHALQHLRNVDPTLGHWIEQIGPYTLQRQPHGFATLAYAIISQ
QLSLVAARTIRDRLNERLGSLAPETIIAADETVLRAAGLSAQKSSYLRDLAERVMSGQ
LDLNLLPTLDDETAITHLMTVKGIGRWTAEIYLMFALERLDVLPAADLGLRDAVRLIY
DQPRLPKPQELRTFGERWRPYRSIACWYLWQARRIMIS"
misc_feature 311671..312144
/locus_tag="Caur_0244"
/note="endonuclease III; includes endonuclease III
(DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA
glycosidases (Alka-family) and other DNA glycosidases;
Region: ENDO3c; cd00056"
/db_xref="CDD:28938"
misc_feature 311695..312153
/locus_tag="Caur_0244"
/note="endonuclease III; Region: ENDO3c; smart00478"
/db_xref="CDD:197751"
misc_feature order(311704..311712,311719..311721,311830..311832)
/locus_tag="Caur_0244"
/note="minor groove reading motif; other site"
/db_xref="CDD:28938"
misc_feature 311938..311961
/locus_tag="Caur_0244"
/note="helix-hairpin-helix signature motif; other site"
/db_xref="CDD:28938"
misc_feature order(311968..311970,312127..312129,312139..312141)
/locus_tag="Caur_0244"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:28938"
misc_feature 312016..312018
/locus_tag="Caur_0244"
/note="active site"
/db_xref="CDD:28938"
gene 312240..312992
/locus_tag="Caur_0245"
/db_xref="GeneID:5827874"
CDS 312240..312992
/locus_tag="Caur_0245"
/EC_number="2.7.7.56"
/note="KEGG: rrs:RoseRS_2001 ribonuclease PH;
TIGRFAM: ribonuclease PH;
PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic
domain 2"
/codon_start=1
/transl_table=11
/product="ribonuclease PH"
/protein_id="YP_001633887.1"
/db_xref="GI:163845843"
/db_xref="InterPro:IPR001247"
/db_xref="InterPro:IPR002381"
/db_xref="InterPro:IPR015847"
/db_xref="GeneID:5827874"
/translation="MMRIDGRSPDQLRPISIEIGAAPYAEGSALIAYGKTRVLCTATV
EDGVPAWMRGQQSGWVTAEYAMLPRATLQRTRRERNGPSGRTQEIQRLIGRSLRAAID
LNALGERTITIDCDVLQADGGTRTAAISGGYVALALAVDYLVRSGVLETRPTLTPVAA
VSVGMLQGVLLLDLCYEEDSQADLDCNVVMNSAGGYIEVQATAERSAVTRDQLNALLD
LAGRGIQQILDAQAAALATALPNNAMSQVQSP"
misc_feature 312243..312911
/locus_tag="Caur_0245"
/note="ribonuclease PH; Reviewed; Region: rph; PRK00173"
/db_xref="CDD:178914"
misc_feature 312270..312911
/locus_tag="Caur_0245"
/note="Ribonuclease PH; Region: RNase_PH_bact; cd11362"
/db_xref="CDD:206767"
misc_feature order(312300..312314,312342..312344,312348..312350,
312354..312356,312360..312362,312366..312368,
312426..312428,312432..312434,312438..312455,
312459..312461,312468..312473,312489..312494,
312498..312503,312510..312512,312522..312524,
312531..312533,312573..312575,312579..312581,
312585..312587,312591..312599,312822..312836,
312840..312842,312846..312863,312867..312869,
312876..312881,312888..312893,312900..312902)
/locus_tag="Caur_0245"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:206767"
misc_feature order(312435..312437,312492..312494,312597..312614,
312774..312776,312792..312794)
/locus_tag="Caur_0245"
/note="active site"
/db_xref="CDD:206767"
gene 313069..314322
/locus_tag="Caur_0246"
/db_xref="GeneID:5827875"
CDS 313069..314322
/locus_tag="Caur_0246"
/note="PFAM: TPR repeat-containing protein;
Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat
protein;
SMART: Tetratricopeptide domain protein;
KEGG: rrs:RoseRS_1999 tetratricopeptide TPR_2 repeat
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633888.1"
/db_xref="GI:163845844"
/db_xref="InterPro:IPR001440"
/db_xref="InterPro:IPR011717"
/db_xref="InterPro:IPR013026"
/db_xref="InterPro:IPR013105"
/db_xref="GeneID:5827875"
/translation="MTDETRRVAGRRHLRYGLAFERTQHPEAAVDQFRRAIAADPTLR
DAHNALAFHYQQQGLLAKAADAFAAVASLADDYFAHFNLGFVLIELERYDEAEREFRR
CLELDPGDVAAQLELAYIYAARGDYETALNFLTIPRQHYYDDWGVFHLLGRCLFHMQR
FDEARQAWQQSLALAPTPETQLELLSCLQSIERRREFHATISHKDELYIHEGVICLGS
AMDDGFTIRPLSNYRFSELDVARTIQRFLALARSSEWRFGGVTTPELMSKPLALTLAQ
LLNLPLLSLHHLPQLSEPILIVMAVGHSADLLTIARERLPVPGPGFCLAVNWTRQSKL
LPEIIGVIVEGQCTVPWEEELQSLDTAGQTDHIKHIAGRLIQMVQTLPGEDNLPRQIR
YYTRHHRRLAINALLHTSPPDHPAE"
misc_feature 313105..313392
/locus_tag="Caur_0246"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature 313108..313392
/locus_tag="Caur_0246"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(313108..313113,313120..313125,313210..313215,
313219..313224,313231..313236,313309..313314,
313321..313326,313333..313338)
/locus_tag="Caur_0246"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature order(313117..313119,313153..313155,313165..313167,
313174..313176,313219..313221,313255..313257,
313267..313269,313276..313278,313318..313320,
313354..313356,313366..313368,313375..313377)
/locus_tag="Caur_0246"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature 313303..313599
/locus_tag="Caur_0246"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(313303..313305,313309..313314,313321..313326,
313411..313416,313420..313425,313432..313437,
313513..313518,313525..313530,313537..313542)
/locus_tag="Caur_0246"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature order(313318..313320,313354..313356,313366..313368,
313375..313377,313420..313422,313456..313458,
313468..313470,313477..313479,313522..313524,
313558..313560,313570..313572,313579..313581)
/locus_tag="Caur_0246"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature 313333..313569
/locus_tag="Caur_0246"
/note="Anaphase-promoting complex, cyclosome, subunit 3;
Region: Apc3; pfam12895"
/db_xref="CDD:205131"
gene 314703..315731
/locus_tag="Caur_0247"
/db_xref="GeneID:5827876"
CDS 314703..315731
/locus_tag="Caur_0247"
/note="KEGG: rca:Rcas_2319 UV damage repair
endonuclease-like protein"
/codon_start=1
/transl_table=11
/product="UV damage repair endonuclease-like protein"
/protein_id="YP_001633889.1"
/db_xref="GI:163845845"
/db_xref="GeneID:5827876"
/translation="MKAIDHPIPGTSHDLAPLYQRASRQSKHAAIRSSGQQYDTTHPG
IRLGFAVRTVSQPGLISGSPPHLSILLTHLGDALRYLERTNIRFYRFALPRHFNLSDL
AECQTQLALLNQHISTRNLRLGVHLDPHLSLSHSDEQVADATIRTIEATCQLLAALDH
AQTINHTLVIHPGAADPAAQQRFIQRWVKLSIQARRRTTIEHTGAGFSLGQLLVLAAR
TGIPIVFDYLHYRLHNPERLSLALALGLTLATWPHQIRPEVHLSSQRSEAHLLPGRNG
TTRVIPPRAGQHADFVVAHDAIALLEAGRGLPPFDLMIEAKAGDLALLRLRQELAHYA
PEWAARLA"
misc_feature 314913..315707
/locus_tag="Caur_0247"
/note="UV-endonuclease UvdE; Region: UvdE; cl10036"
/db_xref="CDD:186895"
gene 316267..317016
/locus_tag="Caur_0248"
/db_xref="GeneID:5827877"
CDS 316267..317016
/locus_tag="Caur_0248"
/EC_number="5.2.1.8"
/note="PFAM: peptidyl-prolyl cis-trans isomerase
cyclophilin type;
KEGG: rrs:RoseRS_2438 peptidylprolyl isomerase"
/codon_start=1
/transl_table=11
/product="peptidyl-prolyl isomerase"
/protein_id="YP_001633890.1"
/db_xref="GI:163845846"
/db_xref="InterPro:IPR002130"
/db_xref="GeneID:5827877"
/translation="MSNERPSTTSNPLAGLVAIAILLIVLGFVAGLLISRSGTPIVVP
TAAPAPTNPPAPTEPASVPTPITGSMPILPTATTYQYSSPPPMSIDPAKKYTATIYTP
RGEIVIELLPDIAPQTVNNFVFLARQNFYNGLTWHRVLPNFMAQGGDPRGDGTGGPGY
TIPAEFTDKILFDQPGIVAMARSSDPNSAGSQFFITTAPAPRLNEQYTIFGRVIQGQE
IVDGIPLRDPSNPADLATPGEMILGIAINEE"
sig_peptide 316267..316380
/locus_tag="Caur_0248"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.759) with cleavage site probability 0.315 at
residue 38"
misc_feature 316558..316956
/locus_tag="Caur_0248"
/note="cyclophilin: cyclophilin-type peptidylprolyl cis-
trans isomerases. This family contains eukaryotic,
bacterial and archeal proteins which exhibit a
peptidylprolyl cis- trans isomerases activity (PPIase,
Rotamase) and in addition bind the...; Region:
cyclophilin; cd00317"
/db_xref="CDD:29390"
misc_feature order(316678..316680,316684..316686,316693..316698,
316702..316704,316807..316812,316840..316842,
316846..316848,316870..316875,316885..316887)
/locus_tag="Caur_0248"
/note="active site"
/db_xref="CDD:29390"
gene 317293..319125
/locus_tag="Caur_0249"
/db_xref="GeneID:5827878"
CDS 317293..319125
/locus_tag="Caur_0249"
/note="PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase
domain protein;
KEGG: rca:Rcas_2308 pyruvate flavodoxin/ferredoxin
oxidoreductase domain protein"
/codon_start=1
/transl_table=11
/product="pyruvate flavodoxin/ferredoxin oxidoreductase
domain-containing protein"
/protein_id="YP_001633891.1"
/db_xref="GI:163845847"
/db_xref="InterPro:IPR002880"
/db_xref="GeneID:5827878"
/translation="MQSPEPVVNEFAITAATVNGSGSQTANMVLMRAIFKMGIPVSGK
NLFPSNIQGEPTWYTLRVSQAGYTARPAETPILVAFNPRTANDDLSQLPPGGICLYPA
DGPWQPSRTDIIPFAIPVRQLLDQVGVNQRLRTYAANMTYVGALAALLGIEDAALVAA
LKQQFRGRLSAIELNLAVIRAAYAWAAAEPSPAHGRFRIARMQATDGMMLIDGNTAAA
IGAITGGVGVVAWYPITPSSSLIESLESYLPRLRPPTDGATCAIVQAEDEIAALGIVI
GAGWAGARAMTATSGPGISLMSEFAGLGFFAEIPAVIWDVQRVGPSTGLPTRTAQGDL
MAVYYLSHGDTRHVILLPGTMEECFSDAQTAFDLAEQLQTPVFVLSDLDLGMNIWMSK
PFTYPEQPLQRGKVLSAEELSRLTNYARFADVDGDGIGYRTLPGNPHPLAATLSRGTG
HNERNVYSERPEDWQRNMARLWRKHETARRLVPRPVIDDHPEATIGLIGFGSTAPAIS
EARDLLAAAGIPTSSMRVRALPFGPEVTNFIARHQICVVIEQNHDGQLRQLLQLHCPA
YASRLGSVAWCDGLPLTAPFVRDQVLHCLESMRETMMIGIGTGN"
misc_feature 317320..319065
/locus_tag="Caur_0249"
/note="2-oxoacid:acceptor oxidoreductase, alpha subunit;
Region: OAFO_sf; TIGR03710"
/db_xref="CDD:211866"
misc_feature 317350..317820
/locus_tag="Caur_0249"
/note="Pyruvate ferredoxin/flavodoxin oxidoreductase;
Region: POR; pfam01558"
/db_xref="CDD:201860"
misc_feature <318061..318435
/locus_tag="Caur_0249"
/note="Pyrimidine (PYR) binding domain of pyruvate
ferredoxin oxidoreductase (PFOR), indolepyruvate
ferredoxin oxidoreductase alpha subunit (IOR-alpha), and
related proteins; Region: TPP_PYR_PFOR_IOR-alpha_like;
cd07034"
/db_xref="CDD:132917"
misc_feature order(318079..318090,318109..318114,318118..318126,
318133..318135,318139..318141,318190..318192,
318199..318201,318211..318213,318250..318255,
318304..318309)
/locus_tag="Caur_0249"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132917"
misc_feature order(318079..318090,318109..318114,318118..318126,
318133..318135,318139..318141,318190..318192,
318199..318201)
/locus_tag="Caur_0249"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132917"
misc_feature 318094..318096
/locus_tag="Caur_0249"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132917"
misc_feature 318244..318246
/locus_tag="Caur_0249"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:132917"
gene 319155..320180
/locus_tag="Caur_0250"
/db_xref="GeneID:5827879"
CDS 319155..320180
/locus_tag="Caur_0250"
/note="catalyzes the coenzyme A-dependent formation of
succinyl-CoA from 2-oxoglutarate and ferredoxin"
/codon_start=1
/transl_table=11
/product="2-oxoglutarate ferredoxin oxidoreductase subunit
beta"
/protein_id="YP_001633892.1"
/db_xref="GI:163845848"
/db_xref="InterPro:IPR011766"
/db_xref="GeneID:5827879"
/translation="MTQVNAIGLSKADYRGAPSTLCAGCGHDSVASQIIAAAFELSLQ
PHTVIRMSGIGCSSKSAAYFLGRSHGFNSLHGRMPSVTTGAHLANHTLRPLAVSGDGD
TASIGLGQFIHLLRRNVPIVYIVENNGVYGLTKGQFSATADEGQELKHAGVNHLPPID
VCAEAILAGCGFVARSFAGDARQVRELIKAAFNVHGSAVIDVISPCVTFNNHDRSTKS
YTYGKTHETPIHDISFIPHYDEVTVDYEPGEVRDVQLHDGPVIRLRKLNRDHDPTDRS
AALALLEQARANNEFVTGLIYLNERRPTLAETLGIGSTPIAALPEDRLRPSREAFAAV
MAELVDG"
misc_feature 319161..320159
/locus_tag="Caur_0250"
/note="2-oxoglutarate ferredoxin oxidoreductase subunit
beta; Validated; Region: PRK05778"
/db_xref="CDD:180253"
misc_feature 319215..319781
/locus_tag="Caur_0250"
/note="Thiamine pyrophosphate (TPP family), 2-oxoglutarate
ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding
module; OGFOR catalyzes the oxidative decarboxylation of
2-oxo-acids, with ferredoxin acting as an electron
acceptor. In the TCA cycle, OGFOR...; Region: TPP_OGFOR;
cd03375"
/db_xref="CDD:73355"
misc_feature order(319377..319379,319449..319460,319536..319538,
319542..319544)
/locus_tag="Caur_0250"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:73355"
misc_feature <319938..320102
/locus_tag="Caur_0250"
/note="Pyruvate ferredoxin oxidoreductase beta subunit C
terminal; Region: PFO_beta_C; pfam12367"
/db_xref="CDD:152802"
gene complement(320681..322705)
/locus_tag="Caur_0251"
/db_xref="GeneID:5827880"
CDS complement(320681..322705)
/locus_tag="Caur_0251"
/note="KEGG: rrs:RoseRS_2439 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633893.1"
/db_xref="GI:163845849"
/db_xref="GeneID:5827880"
/translation="MELVRAILAVEIGSLITRVSLIDEVDGESRLIGQTETLTSRELP
YRNVFFAVQEATAQLADLTGRQLLRDGRLLMPRISTGDGIDAVIVVTSALEPLRVVVA
AIASDVSARSALHAVRGVPSVVLAVVTLDDVSARSTTGVMQSWLERQLETLLPLLPDV
VVLAGGVEGGTVEAMKRLAHLINLKLSFTAAIRQPLPTIIYAGNTSVQPQIQAALGGH
NCELITVANVRPALDQEVLTPLRQALLACYARQLTDVPGIDQLSAPDQTTLRTVAESQ
YVMTRFLAERQQQAVLYVDVGATTTTLIAAAPDQIAATLHGVCGTAFGVGALLSEVGP
AAIARWLPFAIEEQELIERLLNRMLRPQTLPATREDCYLDLALAREALALGVAALRDE
QTPLAYERLLAGGGVLTHAPHPGMALLALLDGLQPANELPGLLLPIHLDMLSLLSVCG
GIAALSTDAAISIFDHDLLNNTPLATCIVLQGGSRIGEPVADVELITVGGDSERVQVR
HGELIRLPLSVGRYAQVKVKPAATVRVGQAAPGEAVESDPAEVHGSLLGLIIDARGRP
LTLPADGAERRRLLWSWLRAVGAEHSDSPYPEPVISLPEMPAPVVAAPSTAPKPRRSW
FKRAPQPAKTSEATLPTTETVPASPDDDIAQLRQQVSKPARRSWFGRRKP"
misc_feature complement(321296..322690)
/locus_tag="Caur_0251"
/note="MutL protein; Region: MutL; pfam13941"
/db_xref="CDD:206112"
gene complement(322747..323394)
/locus_tag="Caur_0252"
/db_xref="GeneID:5827881"
CDS complement(322747..323394)
/locus_tag="Caur_0252"
/note="KEGG: rrs:RoseRS_2440 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633894.1"
/db_xref="GI:163845850"
/db_xref="GeneID:5827881"
/translation="MDIAINLIPILLTLLVFSRVLGDTPAFRLVQYLFVGVALGYAFV
VIYHQVLRPAVIDVLAAGDQPVLLTLRLTPFFLAALLLTRISGQQTSSWLANLPLALV
FGVGAALVVGGAVVGTILPQVLDATRSDLSSPVAILGSIVLLIGSIATLLSFSLTRSS
NPNRQRWIDLVASVGRWILLLAFGFFLAGSIVSYLAALNERLLFIIDWIRAIAGM"
sig_peptide complement(323326..323394)
/locus_tag="Caur_0252"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.737) with cleavage site probability 0.730 at
residue 23"
gene complement(323394..327809)
/locus_tag="Caur_0253"
/db_xref="GeneID:5827882"
CDS complement(323394..327809)
/locus_tag="Caur_0253"
/note="KEGG: rca:Rcas_2219 putative FHA domain containing
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633895.1"
/db_xref="GI:163845851"
/db_xref="GeneID:5827882"
/translation="MSMEHLPPWLRNVPLPPPPTDAADETPAWLRGIDSFTPPAPTPA
TDHPPAWLTEPEPASESAAESASVPDWLAELQAEVADPLADTGSAAEWLGGVEAEPPA
ERPSTFGATGWLQGLGGETSTGPVTPSEPPPTTSSRLRMPVGPTDWLRSMGHEDEVEP
ASAEQSPEPAPPDPNAGVPDWLRELSEEDVSQALASLPPAETTPPVEAKEASEKTPTD
WLDELARLASEDDWARAGAANAETVVATDSPDWLSSAQPPPVDPSAPALPAWLQDVAG
DEPPAAPGSVRLDLPSWLLEDESSLSPTSPAIAPDAPTLLADSRAVVPGQEGVDLSAP
SRLTPAGSEPEASADIPTWLREAEVPAADEWPAAAASEAPAWLQEEGTPAERAGDIPT
WLREAEAPAADEWPAAAASEVPAWLQDEAAPAEREGDIPTWLREAEAPTADEWPAAAS
EAPAWLQDEAAPAEREGDIPTWLREAEAPAADEWPAAASEAPAWLQDEAAPAEREGDI
PAWLREAEAPAADEWPAAAASEAPAWLQDEAAPAEREGDIPTWLREAEAPAADEWPAA
AASEAPAWLQDEAAPAEREGDIPTWLREAEAPAADEWPAAASEAPAWLQEEGTPAERA
GDIPTWLREAEAPAADEWPATAASEAPAWLQDEAAPAERAGDIPTWLREAEAPAADEW
PAAASEAPAWLQEEAAPATGSDVPAWLREEAAPAEREGDIPTWLREAEAPAADEWPAA
ASEAPAWLQEEAAPAAGSDVPAWLREEAAPAAGSDVPAWLREEAAPAAGSDVPAWLRE
EAAPAAGSDVPAWLREEAAPAAGSDVPAWLQEEAAPAAGSDVPAWLREEAAPAAGSDV
PAWLREEAAPAAGSDVPAWLREEAAPAAGSDVPAWLREEAAPAAGSDVPAWLREEAAP
AAGSDVPAWLREEAAPAAGSDVPAWLREEAAPAAGSDVPAWLREEAAPAAGSDVPAWL
REEAAPAAGSDVPAWLREEAAPAAGGDVPAWLREEAAPAAGSDVPVWLQEESAPAAGS
DVPDWLQQASTAPVDTPDWLTADVSAEAISWLQSAPAENAPIAEPSLTTSSTSDEFFS
GAELPPWLRASTERAVEPAITPLSDWLERLRHREAEEEEEVVAGPDVVVVKPPPPAPA
QRTDDQIAAAALLERLLQSPLPAILPVERPVIVRRRLPTLEQWLAVVLLIAVLIGIAI
PGLTATFTNRAQPSPVAVALNEQLAGLSSEDVVLVAYEWGAQRVAELRPLEDVLLTRL
TADRTKLIIVSTDLQGSLLAFDVIGPLRSAGYNNENGVIFGGRDYVLLGYRPGGELAL
RSMAIDLRAELRRDYTGQDATAGLLATRSDGTPRIQSLRDLAMIVVMADQVQDVQAWM
EQIHSAAPQVPIAFLLPQEVYPQVLPYTRLPNVYAVAGQRGASDLLAAGKADNLATPE
LSYQTWATIAFVGVLLLGAFIVGIGQLRRLARGRG"
misc_feature complement(<324768..>325559)
/locus_tag="Caur_0253"
/note="DNA polymerase III subunits gamma and tau;
Validated; Region: PRK07003"
/db_xref="CDD:180790"
gene complement(327833..328501)
/locus_tag="Caur_0254"
/db_xref="GeneID:5827883"
CDS complement(327833..328501)
/locus_tag="Caur_0254"
/note="KEGG: rca:Rcas_2220 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633896.1"
/db_xref="GI:163845852"
/db_xref="GeneID:5827883"
/translation="MSSPLRNPRQLITVLIAGVSGLIVLLDFVGAGPAVSTIAVVLVR
WAALITAIAVAIGVLSVFFVHLRRARSRSAEAGYSLVLLAGMIVVIVAGIFYPTRTAT
GLSLPTTLADPPIRTVFRLIYEPLAASLLALLSFFALSAMLRAMRSGRIEAVFVVAVA
LIALIIQLPPLTLVPIIGQTVQWVNDYLVAAGARGLLLGSAIGALVAGVRLLIGFDMP
YADR"
gene complement(328506..329300)
/locus_tag="Caur_0255"
/db_xref="GeneID:5824862"
CDS complement(328506..329300)
/locus_tag="Caur_0255"
/note="KEGG: rrs:RoseRS_2443 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633897.1"
/db_xref="GI:163845853"
/db_xref="GeneID:5824862"
/translation="MTLPAIFLIVTLIFVVALVWLHHARALSGRLPERRSLPALDMLR
SALARSAETGRPVHLSPGASTIGAGEGQRASTAELLAGLSMIGQAASQAAAGGAAIEV
SSADAVAHLALRGVVRQAYQTLGQSQSFDPRQIELWAHADAMAYATAVAAHYRQAQLE
ASVLSGAFGQEVLLAAETGAQRAIPQVLGSTHPSALGLMIITTPHVLAGEELYAAEAH
LTTAPAPQARLLTHDTLRTIVIWLMLIAFGYGLIRVAFGWPALPGW"
gene complement(329432..329617)
/locus_tag="Caur_0256"
/db_xref="GeneID:5824863"
CDS complement(329432..329617)
/locus_tag="Caur_0256"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633898.1"
/db_xref="GI:163845854"
/db_xref="GeneID:5824863"
/translation="MPVAMLLHIAAPFDVVCSQIVQAFVPLLHGTRWAVIADTLTVPD
HWPALRDLVQSRLQRED"
gene complement(329634..330122)
/locus_tag="Caur_0257"
/db_xref="GeneID:5824864"
CDS complement(329634..330122)
/locus_tag="Caur_0257"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633899.1"
/db_xref="GI:163845855"
/db_xref="GeneID:5824864"
/translation="MIRYEIAATTVTTAPPERVLAVLDDFGNWPRWMPSLERVRIELP
PNEHPRQGYRFKLHGLLVHADMEVIDYTPLSRATRFRISFPPFQGVNRCRLIPLGDGR
YRIERLDQLELPDLVAHLIDSTQRKRFEKLAMEFLQALRREVEQPPHATAASAATTGR
SD"
misc_feature complement(329685..330113)
/locus_tag="Caur_0257"
/note="Ligand-binding SRPBCC domain of Streptococcus
mutans Smu.440 and related proteins; Region:
SRPBCC_Smu440-like; cd08862"
/db_xref="CDD:176871"
misc_feature complement(order(329703..329705,329712..329720,
329724..329732,329736..329750,329784..329786,
329790..329792,329796..329798,329802..329804,
329838..329840,329844..329846,329850..329855,
329877..329879,329883..329885,329919..329921,
329925..329927,329946..329948,329952..329954,
329958..329960,329964..329966,330006..330008,
330051..330056,330060..330068,330093..330095,
330099..330101,330105..330107))
/locus_tag="Caur_0257"
/note="putative hydrophobic ligand binding site [chemical
binding]; other site"
/db_xref="CDD:176871"
gene complement(330163..331233)
/locus_tag="Caur_0258"
/db_xref="GeneID:5824865"
CDS complement(330163..331233)
/locus_tag="Caur_0258"
/EC_number="2.7.1.11"
/note="PFAM: phosphofructokinase;
KEGG: gme:Gmet_1640 phosphofructokinase, pyrophosphate
dependent"
/codon_start=1
/transl_table=11
/product="6-phosphofructokinase"
/protein_id="YP_001633900.1"
/db_xref="GI:163845856"
/db_xref="InterPro:IPR000023"
/db_xref="InterPro:IPR012829"
/db_xref="InterPro:IPR015912"
/db_xref="InterPro:IPR015913"
/db_xref="GeneID:5824865"
/translation="MASKKQRIGVLTSGGDAPGLNAVIRAVVKSASGLGWEVIGIHDG
FEGLLGTKSYRVLTNADVQGLLPRGGTILRTTNKGHFGPRRSDELSEADPYVRAVKAI
EEMGLRALITIGGEGTQRIALELHKLGAPVIGVPKTIDNDLAGTDRTFGFDTALQVAT
DAIDRLHTTAASHNRVMVLEVMGRHTGWIALHAGLAGGADVILIPEIPFSIERVAEKV
MARDQQGSSFSIIVVAEGARPRGGSEMYIAEGRLGGIGHWVGEQLEKLTAKEVRVVVL
GHLQRGGSPSPYDRLLSTRYGAAAVQAAARGIYGEMVALRGQDIVTVPLAEACGHLNR
VRPHSDLVLCARSLGIAFGDEL"
misc_feature complement(330184..331215)
/locus_tag="Caur_0258"
/note="6-phosphofructokinase; Provisional; Region:
PRK03202"
/db_xref="CDD:179553"
misc_feature complement(order(330391..330393,330400..330402,
330529..330531,330682..330690,330808..330810,
330814..330816,330820..330822,330871..330876,
330880..330888,330979..330981,331099..331101,
331189..331191))
/locus_tag="Caur_0258"
/note="active site"
/db_xref="CDD:29437"
misc_feature complement(order(330871..330876,330880..330888,
330979..330981,331099..331101,331189..331191))
/locus_tag="Caur_0258"
/note="ADP/pyrophosphate binding site [chemical binding];
other site"
/db_xref="CDD:29437"
misc_feature complement(order(330283..330285,330328..330330,
330349..330351,330361..330366,330556..330558,
330640..330642,330646..330651,330733..330735,
330742..330744,330754..330756,330790..330792,
331033..331035,331042..331044,331057..331059,
331147..331149,331159..331161))
/locus_tag="Caur_0258"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29437"
misc_feature complement(order(330550..330558,330562..330564,
330634..330636,330640..330642,330733..330735,
331042..331047,331054..331059,331147..331149,
331159..331161))
/locus_tag="Caur_0258"
/note="allosteric effector site; other site"
/db_xref="CDD:29437"
misc_feature complement(order(330391..330393,330400..330402,
330418..330420,330529..330531,330682..330690,
330709..330711,330808..330810,330814..330816,
330820..330822))
/locus_tag="Caur_0258"
/note="fructose-1,6-bisphosphate binding site; other site"
/db_xref="CDD:29437"
gene complement(331528..331713)
/gene="rpmB"
/locus_tag="Caur_0259"
/db_xref="GeneID:5824866"
CDS complement(331528..331713)
/gene="rpmB"
/locus_tag="Caur_0259"
/note="required for 70S ribosome assembly"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L28"
/protein_id="YP_001633901.1"
/db_xref="GI:163845857"
/db_xref="InterPro:IPR001383"
/db_xref="GeneID:5824866"
/translation="MATCELCGKKPSFGHNVSFSKRRTNRIWRPNIQKTTLTVPGGQS
VQVRICTRCMRTLAKTR"
misc_feature complement(<331537..331713)
/gene="rpmB"
/locus_tag="Caur_0259"
/note="50S ribosomal protein L28; Reviewed; Region: rpmB;
PRK00359"
/db_xref="CDD:178987"
gene 331817..332671
/locus_tag="Caur_0260"
/db_xref="GeneID:5824867"
CDS 331817..332671
/locus_tag="Caur_0260"
/note="PFAM: DegV family protein;
KEGG: rca:Rcas_0603 DegV family protein"
/codon_start=1
/transl_table=11
/product="DegV family protein"
/protein_id="YP_001633902.1"
/db_xref="GI:163845858"
/db_xref="InterPro:IPR003797"
/db_xref="GeneID:5824867"
/translation="MATMKVITDGASDIPFEVAHELEIEVVPLLARIDDRLYRIGIDI
SEDQVYDQLFSGNQRVEIVKPNATTFEQLYRSLLGRYDYVFSIHLSRHLGEIYSEALA
GRSRLPASSTRIEIIDSKLAGMGLGSVAIAAARAIRDGMTPAEVNERIGQTIRHTHTA
FFVDTMEYLEQSGLLTFSGSLIGSMQRIKPLMILDEGEIVPYERTRTRAKAIEGLFTF
VEDFPHVEDVIIHYATTPEDVEKLLEKLDPIFSRDRVQVSRMGPAIAACLGPGAMAVT
AFEGFDEA"
misc_feature 331829..332647
/locus_tag="Caur_0260"
/note="EDD domain protein, DegV family; Region: DegV;
TIGR00762"
/db_xref="CDD:188081"
gene 332668..335286
/locus_tag="Caur_0261"
/db_xref="GeneID:5824868"
CDS 332668..335286
/locus_tag="Caur_0261"
/note="catalyzes branch migration in Holliday junction
intermediates"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase RecG"
/protein_id="YP_001633903.1"
/db_xref="GI:163845859"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR002016"
/db_xref="InterPro:IPR004365"
/db_xref="InterPro:IPR004609"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:5824868"
/translation="MTEAERQQVIALGRLLAAERRDGCADRVTTDGLVAYLNQWSAAA
GSAARLPAVQRALGCLVGYDGMTLVERDQALAEAIEILRSLFRTAPTAPVETTVPPSP
AVDPTANAGHVPVTKRNTSARQSRKRAANVDQRPLAELNLDAPLEQIAGIDWRLVGGF
RRLGVRTIRDLLYHFPRRYDDVRNRRSISELQVGAEETVIGEVTDVRTIGAGPKLRVR
VEVSDETGSIEAIFFNQRWIAQQIRVGQTIALSGKVTTFGGKRQFSSPRWERYTPDPD
ALLHTGRLVPIHPLTQGLHENQVRRFIKQVVDTMAPQVEDHLPPVRLQHARLLPLGEA
LAQIHFPTDHTSLAAARRRLGFDEFLFIQIGVLQRKRLWQQEMGYAFTIDSQVHAELQ
RLLPFQLTTAQQRAIEEIFSDLRRPSPMARLLQGDVGSGKTVVAAAALLQAVANGFQG
ALMAPTEILAEQHAKNLKQLLSRVRVPRKTTSATASSAYQQADWRSLLDPEEAAQLAE
IISILGMSPEEDMGGHGVRVALLTGSLGTRERRRVLEGIARGEIDLVVGTHALITETV
QFAQLGLVVVDEQHRFGVEQRLRLKNKGYNPHMLVMTATPIPRTLTMTIYGDLDVSVL
DERPPGRQEIRTKRVGRAERAKVYRHIRKQVAEGRQVYVICPLVEESEKLDLPSAEEM
YERLQHEVFPDLRVALLHGKLSAREKDDVMRAFRDHQYDILVATAVIEVGIDVPNATT
IVIEGAERFGLAQLHQFRGRVGRGHHQSYCILISDSDNQQSKERLAALEQTTDGFKLA
EIDLQLRGPGEFFGTRQSGTPDLKMAQQGDTRLLAEARALADAILADDPELKRPEHDL
LRRKVNDFWAAATQSG"
misc_feature 333073..335139
/locus_tag="Caur_0261"
/note="ATP-dependent DNA helicase RecG; Provisional;
Region: PRK10917"
/db_xref="CDD:182836"
misc_feature 333259..333474
/locus_tag="Caur_0261"
/note="RecG_wedge_OBF: A subfamily of OB folds
corresponding to the OB fold found in the N-terminal
(wedge) domain of Escherichia coli RecG. RecG is a
branched-DNA-specific helicase, which catalyzes the
interconversion of a DNA replication fork to a...; Region:
RecG_wedge_OBF; cd04488"
/db_xref="CDD:72960"
misc_feature order(333259..333261,333406..333408,333412..333414,
333418..333420)
/locus_tag="Caur_0261"
/note="generic binding surface II; other site"
/db_xref="CDD:72960"
misc_feature order(333292..333294,333313..333315,333364..333366,
333376..333378,333454..333456)
/locus_tag="Caur_0261"
/note="ssDNA binding site; other site"
/db_xref="CDD:72960"
misc_feature 333931..334485
/locus_tag="Caur_0261"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 333952..333966
/locus_tag="Caur_0261"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 334396..334407
/locus_tag="Caur_0261"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature 334564..334986
/locus_tag="Caur_0261"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(334663..334674,334765..334770,334843..334851)
/locus_tag="Caur_0261"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(334867..334869,334933..334935,334945..334947,
334954..334956)
/locus_tag="Caur_0261"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
gene 335304..336581
/locus_tag="Caur_0262"
/db_xref="GeneID:5824869"
CDS 335304..336581
/locus_tag="Caur_0262"
/note="PFAM: biotin/lipoyl attachment domain-containing
protein; catalytic domain of components of various
dehydrogenase complexes; E3 binding domain protein;
KEGG: rrs:RoseRS_1675 catalytic domain of components of
various dehydrogenase complexes"
/codon_start=1
/transl_table=11
/product="E3 binding domain-containing protein"
/protein_id="YP_001633904.1"
/db_xref="GI:163845860"
/db_xref="InterPro:IPR000089"
/db_xref="InterPro:IPR001078"
/db_xref="InterPro:IPR004167"
/db_xref="GeneID:5824869"
/translation="MQVHTISIPPALGEATLLEWLVAVGESVTPTTPLARVLTAHAEW
VIPAQYVGIVAEHVVAAGATIPVGGELARCTPPPRVRATPLARRLATALGVDLTALAG
SGPGGRIMRADVVKAVDVASGSSDSLPPPAVVGDTVHARAVADATVGTIVSSTTELRI
VDAQPVPLAGATVAAVDVASDLSDSLPPPAVVGDTVHARAVADATVGTNTSSTIRLRI
VDAQPVPLASATIAIDLQSVLHQCRVQNATFARYGLQATPQSALIAAAAGLFPEHPLI
NAAWTETAIVLRHRYHVAAGLTDGRWVLIRDAGDLNERGIARALTGTGHDLGMATCAI
AVTADWWQITPPLPGTVAALTLSEAQLKPVALGDTTIAVGAVAHLSLCYDARVLDHPT
AMAFLNALCRRLGVRPLAEPQEDEVGLVSSGIA"
misc_feature 335325..336515
/locus_tag="Caur_0262"
/note="Pyruvate/2-oxoglutarate dehydrogenase complex,
dihydrolipoamide acyltransferase (E2) component, and
related enzymes [Energy production and conversion];
Region: AceF; COG0508"
/db_xref="CDD:30854"
misc_feature 335331..335522
/locus_tag="Caur_0262"
/note="Lipoyl domain of the dihydrolipoyl acyltransferase
component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid
dehydrogenase multienzyme complexes, like pyruvate
dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH)
and branched-chain 2-oxo acid...; Region: lipoyl_domain;
cd06849"
/db_xref="CDD:133458"
misc_feature order(335394..335396,335415..335432,335442..335444)
/locus_tag="Caur_0262"
/note="E3 interaction surface; other site"
/db_xref="CDD:133458"
misc_feature 335424..335426
/locus_tag="Caur_0262"
/note="lipoyl attachment site [posttranslational
modification]; other site"
/db_xref="CDD:133458"
misc_feature <335583..335651
/locus_tag="Caur_0262"
/note="e3 binding domain; Region: E3_binding; pfam02817"
/db_xref="CDD:202412"
misc_feature 335973..336515
/locus_tag="Caur_0262"
/note="2-oxoacid dehydrogenases acyltransferase (catalytic
domain); Region: 2-oxoacid_dh; pfam00198"
/db_xref="CDD:201074"
gene complement(336935..337735)
/locus_tag="Caur_0263"
/db_xref="GeneID:5824870"
CDS complement(336935..337735)
/locus_tag="Caur_0263"
/note="KEGG: rrs:RoseRS_4154 phosphate ABC transporter,
ATPase subunit;
TIGRFAM: phosphate ABC transporter, ATPase subunit;
PFAM: ABC transporter related;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="phosphate ABC transporter ATPase"
/protein_id="YP_001633905.1"
/db_xref="GI:163845861"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005670"
/db_xref="GeneID:5824870"
/translation="MTVHDLDHNNPNALEARNMSVYYGSFRAVKNVNLAIEKNRITAL
IGPSGCGKSTVLRSFNRMNDLVPSARVEGEILFHGENIYAPGVDPVNVRRRIGMVFQK
PNPFPKSIYENVAYGPRINGWRLSKREMDELVERSLRGAALWDEVKDKLNQNGLSLSG
GQQQRLCIARALAVEPEVILMDEPCSALDPISTLKIEELMFELRQRYTIVIVTHNMQQ
ASRASDYTAFFLMDSDRAGQLIEYGPTSQIFQNPKDERTEQYISGRFG"
misc_feature complement(336938..337717)
/locus_tag="Caur_0263"
/note="ABC-type phosphate transport system, ATPase
component [Inorganic ion transport and metabolism];
Region: PstB; COG1117"
/db_xref="CDD:31314"
misc_feature complement(336992..337696)
/locus_tag="Caur_0263"
/note="Phosphate uptake is of fundamental importance in
the cell physiology of bacteria because phosphate is
required as a nutrient. The Pst system of E. coli
comprises four distinct subunits encoded by the pstS,
pstA, pstB, and pstC genes. The PstS protein...; Region:
ABC_PstB_phosphate_transporter; cd03260"
/db_xref="CDD:73019"
misc_feature complement(337577..337600)
/locus_tag="Caur_0263"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73019"
misc_feature complement(order(337094..337096,337187..337192,
337433..337435,337574..337582,337586..337591))
/locus_tag="Caur_0263"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73019"
misc_feature complement(337433..337444)
/locus_tag="Caur_0263"
/note="Q-loop/lid; other site"
/db_xref="CDD:73019"
misc_feature complement(337235..337264)
/locus_tag="Caur_0263"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73019"
misc_feature complement(337187..337204)
/locus_tag="Caur_0263"
/note="Walker B; other site"
/db_xref="CDD:73019"
misc_feature complement(337169..337180)
/locus_tag="Caur_0263"
/note="D-loop; other site"
/db_xref="CDD:73019"
misc_feature complement(337088..337108)
/locus_tag="Caur_0263"
/note="H-loop/switch region; other site"
/db_xref="CDD:73019"
gene complement(337755..338690)
/locus_tag="Caur_0264"
/db_xref="GeneID:5824871"
CDS complement(337755..338690)
/locus_tag="Caur_0264"
/note="TIGRFAM: phosphate ABC transporter, inner membrane
subunit PstA;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: sru:SRU_2295 phosphate ABC transporter, permease
protein PstA"
/codon_start=1
/transl_table=11
/product="phosphate ABC transporter permease"
/protein_id="YP_001633906.1"
/db_xref="GI:163845862"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR001098"
/db_xref="InterPro:IPR005672"
/db_xref="GeneID:5824871"
/translation="MSAQEQIRVSAQTAEPIVDRGGGNLKWRHFKGTLLTIFGWLSII
FGLGVLLILILDVINRATGIFSGGTNWLTWDFFNNFDSRFPQRAGAKAAIVGTLYTIS
LTILFAFPLGVAAAIYLEEYARDNWFSRLVEINISNLAAVPSIIYGLLGLQVFARWLL
LGRSILTGALTLALLVVPIIIVASRESIRAVPLSLRQASYALGATRWQTVWHVVLPQS
IGGILTGSILAVSRAIGETAPLITIGALTFVPFLPRNILDIFTVLPIQIFNWTSRPQD
EFRALAAAGILVLLTILLTINALAIYLRNRYQKRY"
misc_feature complement(337854..338480)
/locus_tag="Caur_0264"
/note="ABC-type phosphate transport system, permease
component [Inorganic ion transport and metabolism];
Region: PstA; COG0581"
/db_xref="CDD:30926"
misc_feature complement(337956..338411)
/locus_tag="Caur_0264"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(337965..337970,337977..337988,
338007..338009,338016..338021,338061..338063,
338112..338114,338121..338126,338136..338138,
338142..338147,338154..338156,338160..338162,
338166..338171,338235..338237,338241..338246,
338253..338276,338289..338294,338298..338309,
338331..338333,338346..338351,338358..338363))
/locus_tag="Caur_0264"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(337971..337988,338235..338276,
338289..338291))
/locus_tag="Caur_0264"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(337968..337970,338184..338186,
338235..338237))
/locus_tag="Caur_0264"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(338040..338042,338052..338057,
338073..338111))
/locus_tag="Caur_0264"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(338690..339604)
/locus_tag="Caur_0265"
/db_xref="GeneID:5824872"
CDS complement(338690..339604)
/locus_tag="Caur_0265"
/note="TIGRFAM: phosphate ABC transporter, inner membrane
subunit PstC;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: syf:Synpcc7942_2443 phosphate ABC transporter,
permease protein PstC"
/codon_start=1
/transl_table=11
/product="phosphate ABC transporter permease"
/protein_id="YP_001633907.1"
/db_xref="GI:163845863"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR011864"
/db_xref="GeneID:5824872"
/translation="MAVFDLRRQPNQARAIGEKIIQILLTIAATVSILTTAGIVFSLL
FETIAFFREVSIVEFLTETEWTPLFSIKKYGIWPLVSATVLTSAIAMVVAVPLGLIAA
IFLSEFASDRIRRTVKPLLEILAGIPTVVYGYFALTVVTPFLKNFIPTLSIFNSLGAG
LVMGVMLIPFVASLSEDALSAVPNSLREAAYGLGSTRFEVATRVVAPAAISGIVASIV
LAFSRAVGETMIVAIAAGQNPRFTFDPTVPVMTMTSYIVQVSLGDTPYGSLSYYTLYA
VGFTLFLFTFVLNIFSYWMVRKFREVYD"
misc_feature complement(338696..339604)
/locus_tag="Caur_0265"
/note="ABC-type phosphate transport system, permease
component [Inorganic ion transport and metabolism];
Region: PstC; COG0573"
/db_xref="CDD:30918"
misc_feature complement(338888..339358)
/locus_tag="Caur_0265"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(338906..338911,338918..338929,
338948..338950,338957..338962,339002..339004,
339053..339055,339062..339067,339077..339079,
339083..339088,339095..339097,339101..339103,
339107..339112,339194..339196,339200..339205,
339212..339241,339245..339256,339287..339289,
339302..339307,339314..339319))
/locus_tag="Caur_0265"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(338912..338929,339194..339238))
/locus_tag="Caur_0265"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(338909..338911,339125..339127,
339194..339196))
/locus_tag="Caur_0265"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(338981..338983,338993..338998,
339014..339052))
/locus_tag="Caur_0265"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(339712..341760)
/locus_tag="Caur_0266"
/db_xref="GeneID:5824873"
CDS complement(339712..341760)
/locus_tag="Caur_0266"
/note="TIGRFAM: phosphate binding protein;
PFAM: extracellular solute-binding protein family 1;
KEGG: rrs:RoseRS_4157 phosphate binding protein"
/codon_start=1
/transl_table=11
/product="phosphate binding protein"
/protein_id="YP_001633908.1"
/db_xref="GI:163845864"
/db_xref="InterPro:IPR006059"
/db_xref="InterPro:IPR011862"
/db_xref="GeneID:5824873"
/translation="MVGNPKRWIYGLMLIALIVPVIAACGPQPAAQPTAAPAQPTAAS
AQPTAPASELASLSGDIIIDGSSTVYPPTAAAAEEFSRLAPNVRVSVGISGTGGGFKK
FCNGETDISNASRPIREEEQAICAQNGIEFIELPVAYDGLSVVVNPQNDWVTCLTVAE
LKKIWEPAAQGVITNWNQVREGFPNRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDY
QATEDDNVTITGVSGDLNAMGYLGYAYVVENQGKIKPIAIDNGNGCVEPSFETIADAS
YQPLSRPLFIYVNKEAAERPEVQAFVNFYLSPEFTPIIQTPQVGYVKLSDELYAAIAK
RFNDRVLGTMVRPGEEVGLTLDRYLTGEMPPLPSSAPTFDYATLSGDIIIDGSSTVYP
PTAAAAEEFSRLASNVRVSVGISGTGGGFKKFCNGETDISNASRPIREEEQAICAQNG
IEFIELPVAYDGLSVVVNPQNDWATCLTVAELKKIWEPAAQGVITNWNQVREGFPDRP
LVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQATEDDNVTITGVSGDLNAMGYLGYAY
VVENQGKIKPIAVDNGNGCVEPSFETIADATYQPLSRPLFIYVNKEAAERPEVQAFVN
FYLSPEFTPIIQTPQVGYVKLSDELYAAIAKRFNDRVVGTLVKPGEEVGLTLDRYLGK
"
sig_peptide complement(341665..341760)
/locus_tag="Caur_0266"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.912) with cleavage site probability 0.669 at
residue 32"
misc_feature complement(340789..341748)
/locus_tag="Caur_0266"
/note="phosphate binding protein; Region: ptsS_2;
TIGR02136"
/db_xref="CDD:162722"
misc_feature complement(339826..340683)
/locus_tag="Caur_0266"
/note="phosphate binding protein; Region: ptsS_2;
TIGR02136"
/db_xref="CDD:162722"
gene complement(343090..345027)
/locus_tag="Caur_0267"
/db_xref="GeneID:5824874"
CDS complement(343090..345027)
/locus_tag="Caur_0267"
/note="KEGG: rrs:RoseRS_2393 polymorphic outer membrane
protein"
/codon_start=1
/transl_table=11
/product="polymorphic outer membrane protein"
/protein_id="YP_001633909.1"
/db_xref="GI:163845865"
/db_xref="InterPro:IPR003368"
/db_xref="GeneID:5824874"
/translation="MNLHRWLHLASLLFAMVGFLWPSIPVQAAPKVVGTGTPASCTAT
ALVNAVTGGGEVSFNCGPNSHTIVLNSPLIINAPQTLIDGGGLITLQGGGGRIIDHFT
YGNIGPSRLELRNLTITGGRASGGGTDQSAVDGSGGAIRSYFAAANSAFTPTLVIDRV
IFRDNQTTLTAVPPGRDAYDYGGGAIYSRGGAVIVTNSRFENNHANNGAGGAIHLLQS
SLSVEDSVFLGNTAIGARPQDSFGGAISADGLGGPDRRLRVVRCRFEQNQTYNSGGAI
HANLYEDSSRLEVIDSSFIANAVVGGQRAQGGAIGGGGTAIGTGTGNPEILISGSLFH
ANRARRTPGADGNPREDGSGGAIAFPQQVRLRIVNSTFVANRAEGTGFNANGGALYVL
NNRPEPFVIESSTFAENYAGWVGGAISHSGNGSVSNSLFAYNTAGNGGNGWNIQQHCS
RELTHDGRSLQYPPRLTGASFWNDVTCFAGKSAPSQTGDIQFRDPLLKPLAAYGGLTM
TMAIPADSPARDAGSGCPPTDQRGVARPQLNACDLGAFELQVFLVATPSLLARNQLPP
PLILHGVDFSNATQAFIDGQPRSTTFLDSQRLRLTLTMTDVADLGPLTVTLSGPGSAV
GSTQVQVVEAVYSIYVPQISR"
sig_peptide complement(344941..345027)
/locus_tag="Caur_0267"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.999 at
residue 29"
misc_feature complement(<343378..>344058)
/locus_tag="Caur_0267"
/note="Acinetobacter rhombotarget A; Region: GlyGly_RbtA;
TIGR04212"
/db_xref="CDD:211935"
gene complement(345099..347018)
/locus_tag="Caur_0268"
/db_xref="GeneID:5824875"
CDS complement(345099..347018)
/locus_tag="Caur_0268"
/note="PFAM: N-acetylmuramoyl-L-alanine amidase family 2;
KEGG: rrs:RoseRS_2175 N-acetylmuramoyl-L-alanine amidase,
family 2"
/codon_start=1
/transl_table=11
/product="N-acetylmuramoyl-L-alanine amidase"
/protein_id="YP_001633910.1"
/db_xref="GI:163845866"
/db_xref="InterPro:IPR002502"
/db_xref="GeneID:5824875"
/translation="MPDFPTEGSPPFINRMLTIAEWREYVASYDFGKLTPTRLVLHHT
YRPDETSWRGLTTMRGIQKFYAGKGWTAGPHIFAAPDGIWLATPMSQIGIHAGAGNGS
LAKGWYSIGLEMVGYFDKVLPSGKVWEHSLAVMGELSRRLKIPPRQLISFHRDYTNQK
SCPGWAVTKEWVWSQVEAYLNNSTPPTIPPGQIGTPTPDDERLIEALLEEGYKHKTNG
QGYNADWAFHAYALEHQLGMPMGPSARLTVAGKEYNYQPFARDTLYCEVPNWGDVKTL
SELLGGSIPPSGLGRALLDATYQAGGSPFRPDWAFHQYAVARRLGPPVGKSAQITVDG
KQYAYQAFAVDTLYNLVPNWSDVRQLSQIGTATDPATVRLRDALLTETFKQAGTTYRP
DWAFHQLARQWAIGAPLANSYQITLEKTTYALQPFALDVLYNVVPNWADVKRLSDLAR
QHGMPVLGMAMAIAPLVSAESLTPPDDGGFSITQVTPPAMAFGERHGERVSMVVLHAV
PGAVAETIAAMTDFNARFATHYLIGLDGRIYRLIDEAKAAWHAGFATGGGVRYNLNRI
SIGIALERPAGWPATRDAGDTDAQIRALRWLLRQLDARYRLSPDAIVLWTSLAGSDDE
ALSGLPLGALREALS"
misc_feature complement(346521..346913)
/locus_tag="Caur_0268"
/note="Peptidoglycan recognition proteins (PGRPs) are
pattern recognition receptors that bind, and in certain
cases, hydrolyze peptidoglycans (PGNs) of bacterial cell
walls. PGRPs have been divided into three classes: short
PGRPs (PGRP-S), that are small (20...; Region: PGRP;
cd06583"
/db_xref="CDD:133475"
misc_feature complement(order(346533..346535,346539..346541,
346560..346562,346797..346799,346893..346895))
/locus_tag="Caur_0268"
/note="amidase catalytic site [active]"
/db_xref="CDD:133475"
misc_feature complement(order(346533..346535,346560..346562,
346893..346895))
/locus_tag="Caur_0268"
/note="Zn binding residues [ion binding]; other site"
/db_xref="CDD:133475"
misc_feature complement(order(346533..346541,346548..346550,
346560..346562,346716..346718,346734..346739,
346758..346760,346797..346799,346809..346811,
346887..346892))
/locus_tag="Caur_0268"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133475"
misc_feature complement(345189..345524)
/locus_tag="Caur_0268"
/note="Peptidoglycan recognition proteins (PGRPs) are
pattern recognition receptors that bind, and in certain
cases, hydrolyze peptidoglycans (PGNs) of bacterial cell
walls. PGRPs have been divided into three classes: short
PGRPs (PGRP-S), that are small (20...; Region: PGRP;
cd06583"
/db_xref="CDD:133475"
gene complement(347037..347996)
/locus_tag="Caur_0269"
/db_xref="GeneID:5824876"
CDS complement(347037..347996)
/locus_tag="Caur_0269"
/note="PFAM: Integral membrane protein TerC;
KEGG: gvi:glr4409 putative transmembrane transport
protein"
/codon_start=1
/transl_table=11
/product="integral membrane protein TerC"
/protein_id="YP_001633911.1"
/db_xref="GI:163845867"
/db_xref="InterPro:IPR005496"
/db_xref="GeneID:5824876"
/translation="MDITLWAWIGFHAIVFLVLALDLGVFHRRSHKVSIREAGLWTLV
WVTLSLIFNGIIWLWRGPEDGLNFLTGYLVEYSLSVDNIFVFILLFSYFRVPAQYQHR
VLFWGILGALIMRGTMILLGSALIEQFEWILYLFGAFLLVTGVRLIFHDDEPEVDPQR
NLLVRLARRLLPITPDMRGDRFFVREADRFSATPLFLVLLIVESTDLLFAVDSIPAIF
GITHDPFIVYTSNICAILGLRSLYFLLAGVMESFYYLRFGLAIILSFIGVKMLTPLVT
GWFLGGHSVHIPTTISLGVIVVTLLASVVASLIRSRRLASATD"
misc_feature complement(347115..347987)
/locus_tag="Caur_0269"
/note="integral membrane protein, TerC family; Region:
R_switched_Alx; TIGR03718"
/db_xref="CDD:200316"
gene complement(348026..350029)
/locus_tag="Caur_0270"
/db_xref="GeneID:5828027"
CDS complement(348026..350029)
/locus_tag="Caur_0270"
/note="PFAM: GAF domain protein; ATP-binding region ATPase
domain protein; histidine kinase
dimerisation/phosphoacceptor;
KEGG: rca:Rcas_4451 signal transduction histidine kinase"
/codon_start=1
/transl_table=11
/product="GAF domain-containing protein"
/protein_id="YP_001633912.1"
/db_xref="GI:163845868"
/db_xref="InterPro:IPR003018"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR011495"
/db_xref="GeneID:5828027"
/translation="MKDATVRSMYEVLTSQPPDLVGVLRETIPSIGMLIDALEQQSDP
TLRLSLLRQIGAEWYACGGMAEVLTELGLHLAARLPMAQGIVVSELLLAFGAAQEEQR
TREWEARLVARATQLDGLHRIISAANSTLDLDTSLQTVVETVAQVMNVEACSIYLYDK
HRDDLVLRATHGLNRAAIGQVVARLGEGVTGWAAQLGYPVAVSDVYKDPRYHREPQLG
EEMFRSMLAVPIVLFSAERFQFSADKLQGVINVQTIAPREFTQEEISFVETAAGELAF
FIANAQLYQQTDERLHQKLRELTTLQQVSKLIAEQIGLHDVLNLIVEKAVHLSKVDRA
AIFQMGEDGQLKLVASYGGEGDGVRDLVIQTVRDGRPLAVMNAYQDARFPQLPAVARA
ENFHSLFCMPLRARGRTIGGICLYRREPHLFDYEQVRLLNTFADEAAIAIENARLYEE
SLRALRIKSALLQEMHHRVRNNLQTIAALLSMQLRRLDPASPGAKALRESAARIQAIA
AIHNLLSRDDIGVTTVGAVARQVIESVQSTLFESDIRVDFAILGDEVRIGSRDATVLA
LVINELVDNALTHGLAVEGGRIEVEAVLEHGQVLVELRDDGPRHPPPPSRHSSGLGLQ
IIETLVNSDLNGSFSLIRDEEAGWMRARIRFPQRIIDEDRIEV"
misc_feature complement(349193..349642)
/locus_tag="Caur_0270"
/note="GAF domain; Region: GAF_2; pfam13185"
/db_xref="CDD:205366"
misc_feature complement(349172..349636)
/locus_tag="Caur_0270"
/note="Domain present in phytochromes and cGMP-specific
phosphodiesterases; Region: GAF; smart00065"
/db_xref="CDD:197499"
misc_feature complement(348680..349090)
/locus_tag="Caur_0270"
/note="Domain present in phytochromes and cGMP-specific
phosphodiesterases; Region: GAF; smart00065"
/db_xref="CDD:197499"
misc_feature complement(348701..349090)
/locus_tag="Caur_0270"
/note="GAF domain; Region: GAF_2; pfam13185"
/db_xref="CDD:205366"
misc_feature complement(348062..348712)
/locus_tag="Caur_0270"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG3920"
/db_xref="CDD:33706"
misc_feature complement(348416..348640)
/locus_tag="Caur_0270"
/note="Histidine kinase; Region: HisKA_2; pfam07568"
/db_xref="CDD:203685"
misc_feature complement(<348224..348349)
/locus_tag="Caur_0270"
/note="Histidine kinase-, DNA gyrase B-, and HSP90-like
ATPase; Region: HATPase_c; pfam02518"
/db_xref="CDD:202270"
gene complement(350256..351056)
/locus_tag="Caur_0271"
/db_xref="GeneID:5828028"
CDS complement(350256..351056)
/locus_tag="Caur_0271"
/note="PFAM: ABC-2 type transporter;
KEGG: rca:Rcas_0420 ABC-2 type transporter"
/codon_start=1
/transl_table=11
/product="ABC-2 type transporter"
/protein_id="YP_001633913.1"
/db_xref="GI:163845869"
/db_xref="InterPro:IPR013525"
/db_xref="GeneID:5828028"
/translation="MIMLRWEPIKVIIAKEWLELRRSRGLLLSMLLPPIFLPLFALGL
IFVMGLVSDPDTADIPAAAVDPALANLGLEALAQVIFGRQFSTLFLLLPMIIPNVLAS
YSIVGEKNRRTLEPLLAAPIKVSELLLGKVLAAIIPGIVLTWGCAIVFAVGLAIVVVD
PQVPALVLQPGWVATLLLSSPLLAIISVALTVMISSRVNDPRSAQQIAGVLIVPVMLL
FFGQMLGLFVLNVVVALIFALVLALIAAGLIWLATNVFQREEILTRWR"
misc_feature complement(<350418..350918)
/locus_tag="Caur_0271"
/note="ABC-2 family transporter protein; Region:
ABC2_membrane_2; pfam12679"
/db_xref="CDD:205014"
misc_feature complement(<350415..>350849)
/locus_tag="Caur_0271"
/note="ABC-type Na+ efflux pump, permease component
[Energy production and conversion / Inorganic ion
transport and metabolism]; Region: NatB; COG1668"
/db_xref="CDD:31854"
gene complement(351341..352273)
/locus_tag="Caur_0272"
/db_xref="GeneID:5828029"
CDS complement(351341..352273)
/locus_tag="Caur_0272"
/note="PFAM: ABC transporter related;
SMART: AAA ATPase;
KEGG: rrs:RoseRS_4617 ABC transporter related"
/codon_start=1
/transl_table=11
/product="ABC transporter-like protein"
/protein_id="YP_001633914.1"
/db_xref="GI:163845870"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:5828029"
/translation="MNAIECYQLSRRFQTITAVDNLDLVVPAGTIFGFLGPNGAGKTT
TVRMLCALIAPSSGSARVAGFDVQTEADSVRANTGILTETPALYDTLSALENLTFFAR
LYGLSATQASERAAHYLRLFELWERRNDPVGGFSKGMRQKLAIARALLHDPAVLFLDE
PTSGLDPAASRSVRDVIKSLRASGRTIFLTTHNLAEADELCDLIGVFRTRLISLDTPA
NLRTRLFGRSVRVVLAGPAAPLAPLVQQLSFVMNVTVDDERTLLVQLTDPEKDNPVLV
RALVAAGADVCYIEPFTPSLEAVYLELIQEPVAG"
misc_feature complement(351611..352264)
/locus_tag="Caur_0272"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(351362..352243)
/locus_tag="Caur_0272"
/note="daunorubicin resistance ABC transporter ATP-binding
subunit; Region: drrA; TIGR01188"
/db_xref="CDD:130256"
misc_feature complement(352145..352168)
/locus_tag="Caur_0272"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(351698..351700,351794..351799,
352025..352027,352142..352150,352154..352159))
/locus_tag="Caur_0272"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(352025..352036)
/locus_tag="Caur_0272"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(351842..351871)
/locus_tag="Caur_0272"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(351794..351811)
/locus_tag="Caur_0272"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(351776..351787)
/locus_tag="Caur_0272"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(351692..351712)
/locus_tag="Caur_0272"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 352841..353362
/locus_tag="Caur_0273"
/db_xref="GeneID:5828030"
CDS 352841..353362
/locus_tag="Caur_0273"
/EC_number="2.4.2.7"
/note="catalyzes a salvage reaction resulting in the
formation of AMP which is metabolically less costly than a
de novo synthesis"
/codon_start=1
/transl_table=11
/product="adenine phosphoribosyltransferase"
/protein_id="YP_001633915.1"
/db_xref="GI:163845871"
/db_xref="InterPro:IPR000836"
/db_xref="InterPro:IPR002375"
/db_xref="InterPro:IPR005764"
/db_xref="InterPro:IPR006034"
/db_xref="GeneID:5828030"
/translation="MTRQDLASLIRNIPDFPIPGIQFKDITTLIGNGQAFSEVIDRLH
ERYQNQQIDAVVGIESRGFIFSAPLAYRLGVGLVPIRKPGKLPAATYQIEYQLEYGTN
RLEIHRDAFQPGARVLVIDDLLATGGTIAAACDLIEMAGGQVAELAFVIELTFLNGRE
RLRERPVFSLIQF"
misc_feature 352955..353353
/locus_tag="Caur_0273"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(353015..353017,353021..353023,353201..353209,
353213..353227,353297..353299)
/locus_tag="Caur_0273"
/note="active site"
/db_xref="CDD:206754"
gene 354152..355486
/gene="rho"
/locus_tag="Caur_0274"
/db_xref="GeneID:5828031"
CDS 354152..355486
/gene="rho"
/locus_tag="Caur_0274"
/note="An RNA-DNA helicase that actively releases nascent
mRNAs from paused transcription complexes"
/codon_start=1
/transl_table=11
/product="transcription termination factor Rho"
/protein_id="YP_001633916.1"
/db_xref="GI:163845872"
/db_xref="InterPro:IPR000194"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR004665"
/db_xref="InterPro:IPR011112"
/db_xref="InterPro:IPR011113"
/db_xref="InterPro:IPR011129"
/db_xref="GeneID:5828031"
/translation="MTVAELETKTLADLREMARKLDISGISSLKKRELIDKLIQAQTA
TQTQTITVTEPPALPDLNPIETTTVDRTSIEFSTIYSDGILDIMAEGFGFLRGNRMLP
SPEDVYVSQSQIRRFALRSGDRIWGQIRPPKESERYYSLLRVEKINDQDPETARKRPF
FDQLTPIFPNEQIKLETEPNLLHTRLVDLIAPIGRGQRGLIVSPPKAGKTMLLKAIAN
GITTNYPDIILMVLLIGERPEEVTDMRRSVRGEVISSTFDEPVENHTKVAEMTLERAK
RLVEIGHDVVILMDSITRLARAYNVAMPPSGRTLSGGIDPVALYPPKRFFGAARNIEN
GGSLTIIATCLIDTGSRMDDVIYEEFKGTGNMELHLDRKLAEKRIFPAIDIQRSGTRR
EDLLLSPDTLRQVWTLRRMVSMLGENEGTELMLTRMAKTKSNAEFLQTLSKS"
misc_feature 354152..355480
/gene="rho"
/locus_tag="Caur_0274"
/note="transcription termination factor Rho; Provisional;
Region: rho; PRK09376"
/db_xref="CDD:181809"
misc_feature 354164..>354265
/gene="rho"
/locus_tag="Caur_0274"
/note="Rho termination factor, N-terminal domain; Region:
Rho_N; pfam07498"
/db_xref="CDD:203652"
misc_feature 354392..354589
/gene="rho"
/locus_tag="Caur_0274"
/note="Rho_CSD: Rho protein cold-shock domain (CSD). Rho
protein is a transcription termination factor in most
bacteria. In bacteria, there are two distinct mechanisms
for mRNA transcription termination. In intrinsic
termination, RNA polymerase and nascent mRNA...; Region:
Rho_CSD; cd04459"
/db_xref="CDD:88425"
misc_feature order(354407..354409,354413..354415,354425..354427,
354431..354433,354437..354439,354467..354469,
354473..354475,354548..354550,354557..354565)
/gene="rho"
/locus_tag="Caur_0274"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:88425"
misc_feature 354695..355438
/gene="rho"
/locus_tag="Caur_0274"
/note="Transcription termination factor rho is a bacterial
ATP-dependent RNA/DNA helicase. It is a homohexamer. Each
monomer consists of an N-terminal domain of the OB fold,
which is responsible for binding to cysteine rich
nucleotides. This alignment is of the...; Region:
rho_factor; cd01128"
/db_xref="CDD:29994"
misc_feature order(354743..354745,355076..355078,355109..355111,
355118..355123,355130..355132,355139..355141,
355148..355150,355223..355228,355232..355246,
355250..355252,355322..355327,355367..355369,
355379..355381)
/gene="rho"
/locus_tag="Caur_0274"
/note="multimer interface [polypeptide binding]; other
site"
/db_xref="CDD:29994"
misc_feature 354758..354781
/gene="rho"
/locus_tag="Caur_0274"
/note="Walker A motif; other site"
/db_xref="CDD:29994"
misc_feature order(354767..354769,354773..354784,355289..355291)
/gene="rho"
/locus_tag="Caur_0274"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29994"
misc_feature 355007..355021
/gene="rho"
/locus_tag="Caur_0274"
/note="Walker B motif; other site"
/db_xref="CDD:29994"
STS 355527..356762
/standard_name="D1S3696"
/db_xref="UniSTS:474274"
gene 355566..356513
/locus_tag="Caur_0275"
/db_xref="GeneID:5828032"
CDS 355566..356513
/locus_tag="Caur_0275"
/note="PFAM: protein of unknown function DUF124;
KEGG: rca:Rcas_3709 protein of unknown function DUF124"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633917.1"
/db_xref="GI:163845873"
/db_xref="InterPro:IPR002838"
/db_xref="GeneID:5828032"
/translation="MNCPQCGAPVAPNARFCTNCGARLTPAAAAPSSFIPPSGESVSM
ADVYDNRPGERLDLPEPTIVGTGVGASGLRYKIIGTTMQAVVLEVPAGQTIFSERGGM
SWMSANVQMQTNMEGGLGGAFKRMFSGESIFMVNFTPQGGPGIIGFSAELPGKIVPLN
LAPGQTMICQKDSFMCAERSVSLDIHFRRKLGAGFFGGEGFIMQKLTGPGLAFVELDG
EVVEYTLEANQMLKVDTGHVAMYEPTINFDVEMVRGFKNILFGGEGLFLTTLRGPGRV
WLQTMPAMNLAKKLAQYMPTTSSSSGSGGINLGNLFTND"
misc_feature 355566..355637
/locus_tag="Caur_0275"
/note="zinc-ribbon domain; Region: zf-ribbon_3; pfam13248"
/db_xref="CDD:205428"
misc_feature 355572..>355637
/locus_tag="Caur_0275"
/note="Double zinc ribbon; Region: DZR; pfam12773"
/db_xref="CDD:205068"
misc_feature 355788..356411
/locus_tag="Caur_0275"
/note="Mitochondrial biogenesis AIM24; Region: AIM24;
pfam01987"
/db_xref="CDD:190185"
gene complement(358297..358665)
/locus_tag="Caur_0276"
/db_xref="GeneID:5828033"
CDS complement(358297..358665)
/locus_tag="Caur_0276"
/note="PFAM: Roadblock/LC7 family protein;
KEGG: rrs:RoseRS_0746 roadblock/LC7 family protein"
/codon_start=1
/transl_table=11
/product="roadblock/LC7 family protein"
/protein_id="YP_001633918.1"
/db_xref="GI:163845874"
/db_xref="InterPro:IPR004942"
/db_xref="GeneID:5828033"
/translation="MASRTEEMVRHLKALSMNTPDIEASAVVSVDGLIMASALPADVE
EDRVSAMSAAMLSLGERIASELRRGQLDQVFVRGEDGYVILMAIGEEAVLTALAQSRA
KLGLVFLDMRRTANELVNLV"
misc_feature complement(358300..358650)
/locus_tag="Caur_0276"
/note="Uncharacterized distant relative of homeotic
protein bithoraxoid [General function prediction only];
Region: COG2018"
/db_xref="CDD:32201"
gene complement(359276..360508)
/locus_tag="Caur_0277"
/db_xref="GeneID:5828034"
CDS complement(359276..360508)
/locus_tag="Caur_0277"
/note="PFAM: extracellular solute-binding protein family
1;
KEGG: rrs:RoseRS_0747 extracellular solute-binding
protein, family 1"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein"
/protein_id="YP_001633919.1"
/db_xref="GI:163845875"
/db_xref="InterPro:IPR006059"
/db_xref="GeneID:5828034"
/translation="MLTACSVLPSTAPVRTSERVVLRLWHAWPAADSRVLQSLVDQFN
QTHPESQIVIQSRPAVSLPSDVATTISEGGGPHLVIVQSHMLGMLVQAGVLRSLDDML
SNSEVNSLLPAAVGAAQVSVSGQPVLFGVPITFDTLALYYNRANVLQPPSSTEEMLLT
ARALTNRNQTPPVWGLAYNLSLDRTIGYLYAFGGRVFDENGAVVLGSSGRAGTERWLT
WLSQLYRDEQLLATLDGVLVDRALQAREAIMTIDWAHAQAEYRAIWNDQLGVTPLPVL
SAEDRVPQPYVQADVIALNARLDNQAEQAAAQAFIRFMIDVNSQRALLAAGRQPTQLA
LQLSDNDLADSVQLAAARAFRLQAQNGLPMPADRVAHEIVWTTLVEMQLNAVRGLLTP
EQAVTLADEFLRSRLASP"
misc_feature complement(359288..360505)
/locus_tag="Caur_0277"
/note="Maltose-binding periplasmic proteins/domains
[Carbohydrate transport and metabolism]; Region: MalE;
COG2182"
/db_xref="CDD:32365"
misc_feature complement(359564..360418)
/locus_tag="Caur_0277"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_1; pfam01547"
/db_xref="CDD:201851"
gene 360997..362346
/locus_tag="Caur_0278"
/pseudo
/db_xref="GeneID:5828035"
gene 363255..363833
/locus_tag="Caur_0279"
/db_xref="GeneID:5828036"
CDS 363255..363833
/locus_tag="Caur_0279"
/note="TIGRFAM: phosphoheptose isomerase;
KEGG: wsu:WS0681 phosphoheptose isomerase"
/codon_start=1
/transl_table=11
/product="phosphoheptose isomerase"
/protein_id="YP_001633920.1"
/db_xref="GI:163845876"
/db_xref="InterPro:IPR004515"
/db_xref="GeneID:5828036"
/translation="MSFQQQLDEAITVLQACTTLAPAIDRITELVADAILSGHTLYTA
GNGGSAADAMHLAEELIGRYRHNRRPLPAICLNADVGAMTCIANDFGYDEVFARQLTA
LGKPGDVLIVFSTSGNSPNIINALSTARARGMINIALLGKDGGMARNLADHALIVPSQ
NTARIQEVHTLFLHAICEQVEQRLASASEPYV"
misc_feature 363273..363800
/locus_tag="Caur_0279"
/note="Phosphoheptose isomerase is a member of the SIS
(Sugar ISomerase) superfamily. Phosphoheptose isomerase
catalyzes the isomerization of sedoheptulose 7-phosphate
into D-glycero-D-mannoheptose 7-phosphate. This is the
first step of the biosynthesis of...; Region: SIS_GmhA;
cd05006"
/db_xref="CDD:88403"
misc_feature order(363282..363284,363294..363296,363327..363329,
363336..363338,363396..363398,363414..363419,
363750..363755,363765..363767,363774..363776,
363786..363788,363798..363800)
/locus_tag="Caur_0279"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88403"
misc_feature order(363390..363398,363594..363602,363609..363611,
363738..363740,363750..363752)
/locus_tag="Caur_0279"
/note="active site"
/db_xref="CDD:88403"
gene 363843..365420
/locus_tag="Caur_0280"
/db_xref="GeneID:5828037"
CDS 363843..365420
/locus_tag="Caur_0280"
/EC_number="1.1.1.95"
/note="catalyzes the formation of 3-phosphonooxypyruvate
from 3-phospho-D-glycerate in serine biosynthesis; can
also reduce alpha ketoglutarate to form
2-hydroxyglutarate"
/codon_start=1
/transl_table=11
/product="D-3-phosphoglycerate dehydrogenase"
/protein_id="YP_001633921.1"
/db_xref="GI:163845877"
/db_xref="InterPro:IPR002912"
/db_xref="InterPro:IPR006139"
/db_xref="InterPro:IPR006140"
/db_xref="InterPro:IPR006236"
/db_xref="GeneID:5828037"
/translation="MNRILVTEKIAAEGLAVLRQAGTVDVRLDLDKPTLISIIGEYDA
LVVRSATKVTAEVIAAGERLRVIGRAGTGVDNIDVEAATRRGIIVVNAPASNNVAVAE
LTIGLLISLARRIPQAHASLQSGRWARNDFVGWEVRGKTLGLVGLGRIGSEVARRARS
LEMEVLAYDPVVSFDRAEQLGVSLVTLDELVQRSDVISLHVPLIESTRNLFDQQRIMQ
MKRGAYLINASRGGIVDEVALVEALNSGHLGGAALDVYNQEPLPADSPLLGHPKIITV
PHIGASTTEAQLSAGTEMAEGVVTALNGGTPRYAVNAPFVAPEAWNVLQPYLNLGRLL
GTLVMQLVQEPVRSYDLELGGELADMDTQPVRLAVLQGLLAASSSERITPVNAPIIAR
ERGVRMTERVSPEAENYAGLITLHVQTAERTRTFSGTVLRGEPHIVQMDGYFVDFVPQ
GSLLITYHHDQPGMIGKVGQLLGAADVNISGMYVGRRAPRERAVMVLTLDEPAPPQVM
EQIATIPGIQAAFSVEL"
misc_feature 363849..365417
/locus_tag="Caur_0280"
/note="D-3-phosphoglycerate dehydrogenase; Provisional;
Region: PRK13581"
/db_xref="CDD:184162"
misc_feature 364155..364682
/locus_tag="Caur_0280"
/note="D-isomer specific 2-hydroxyacid dehydrogenase, NAD
binding domain; Region: 2-Hacid_dh_C; pfam02826"
/db_xref="CDD:202418"
misc_feature 365199..365417
/locus_tag="Caur_0280"
/note="C-terminal ACT (regulatory) domain of
D-3-phosphoglycerate dehydrogenase (3PGDH); Region:
ACT_3PGDH-xct; cd04902"
/db_xref="CDD:153174"
misc_feature order(365214..365216,365220..365222,365274..365276)
/locus_tag="Caur_0280"
/note="putative L-serine binding site [chemical binding];
other site"
/db_xref="CDD:153174"
gene complement(365477..366610)
/locus_tag="Caur_0281"
/db_xref="GeneID:5828038"
CDS complement(365477..366610)
/locus_tag="Caur_0281"
/note="KEGG: wsu:WS0992 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633922.1"
/db_xref="GI:163845878"
/db_xref="GeneID:5828038"
/translation="MNCKALIFLVPHPNTPIVTFDSIAALWAKTDVTGQMLLLIALAG
VAIFAIRHLQSLIWNLSEFSRFRRSSAYLQLRETNGAVMLMALPLTLAMTINVAFVSG
AVFVPGLWNVVEYLFPFAMTAFLLVGVLALRTFADIFGRALANGHFDCTRNNNLTQLL
AAFAFAMVGVGMAAPAAMSTVKLTIGLSMLGTIFFITAAVVIALILLVLGARAMLTNG
LAVEAGPSLWMPIPLLTLIGIAMLRISHGLHSGFELHIEAPHRLLITAVFFSLQLLAG
LLGLSVLRRVGYFRTYLNGPARSPGAYGLICPAVGLFVFGMFFLHVGLVQNGLIEKFS
PVYFVALAALAVVQVLGIITMFRLDRRLLAQPARSPAEAERVA"
gene complement(366863..367246)
/locus_tag="Caur_0282"
/db_xref="GeneID:5828039"
CDS complement(366863..367246)
/locus_tag="Caur_0282"
/note="PFAM: helix-turn-helix Fis-type"
/codon_start=1
/transl_table=11
/product="helix-turn-helix Fis-type protein"
/protein_id="YP_001633923.1"
/db_xref="GI:163845879"
/db_xref="InterPro:IPR002197"
/db_xref="GeneID:5828039"
/translation="MAHRETSRDEVIAALHANRGLIALAARDLGVSRQALYARIKRDP
ELLACIEHEREAIVDLAEQKLFEALDKGERWAVMLVLTRLGRHRGWADAPASGGPEGR
VAKALEQASLDDLMLSLTTLNGQRR"
misc_feature complement(367121..367237)
/locus_tag="Caur_0282"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
gene complement(367288..368313)
/locus_tag="Caur_0283"
/db_xref="GeneID:5828040"
CDS complement(367288..368313)
/locus_tag="Caur_0283"
/note="PFAM: zinc finger CHC2-family protein;
KEGG: fra:Francci3_3307 zinc finger, CHC2-type"
/codon_start=1
/transl_table=11
/product="zinc finger CHC2-family protein"
/protein_id="YP_001633924.1"
/db_xref="GI:163845880"
/db_xref="InterPro:IPR002694"
/db_xref="GeneID:5828040"
/translation="MTLTTAPTIDLPALIERLGVRLHRYGRSYRCACPLHAGDNELAF
SIYQSRSGQWRWHCFSGDCGDGDAIAFVRRYYGVGYREACQMLGVTPASAPSGPRSPQ
PPPVEPPSAQWQHTVGRLVDQAVQALWSPAGQAARAYLYQRGLTDALIRRAGLGYHPA
ATRIRAETLGLDGDNPYYPAGIVIPYWVEGDLWRVQVRRLSNTEPRYLSLAGSSGAPP
YLIAPITSAKPLVLAEGPVDVLAIMQAAGDLVTAIGTGATGCRAVRWIARCAVAPLVL
AAHDADEAGDAAAAYWCDALQPRCTRWRPTLHDPAEMLQLGGLALVRQWIEQGLASAE
GDGYNRR"
misc_feature complement(<367549..368289)
/locus_tag="Caur_0283"
/note="DNA primase, catalytic core; Region: dnaG;
TIGR01391"
/db_xref="CDD:162334"
misc_feature complement(368044..368289)
/locus_tag="Caur_0283"
/note="CHC2 zinc finger; Region: zf-CHC2; cl15369"
/db_xref="CDD:199505"
misc_feature complement(<367837..367932)
/locus_tag="Caur_0283"
/note="DNA primase catalytic core, N-terminal domain;
Region: Toprim_N; pfam08275"
/db_xref="CDD:203896"
gene complement(368429..370912)
/locus_tag="Caur_0284"
/db_xref="GeneID:5828041"
CDS complement(368429..370912)
/locus_tag="Caur_0284"
/note="KEGG: dvl:Dvul_0087 toprim sub domain protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633925.1"
/db_xref="GI:163845881"
/db_xref="GeneID:5828041"
/translation="MKKHTSTSSYHNGSPASTPPDHLIAEALRALAGPDDAAAQQAAQ
TDCGPWNHVRDALATARASGGQPAAQRALAALQHQYPDLTTLLASAQALDLDDDDEPA
SDAPSPLPLGGLPGWVREMVRHTAEAVQVPVDLAHALALGALSVATAGAMRVQLTSDW
NEETCLYVMPALPSGERKSAAFALLIGPIEQWEDDERNRRAPEYTTSQARKRVLDKEI
ERLTAEAAKEQDASRKKQLEWALATAITEYERVALAAPFRRLLQNATPEALTSALVAH
QRIAVVSPEPDSMQVLIGAGRDGPPMLEAILKGYNGERLIIDRQTRQSQRVAAPALTM
VLAAQPHAVRDLIRNRALIERGVLARYLILLPPSRLGARAIAPPVIPELVKATYATHL
RWLLDTCQPPAPEQRHTVTLSAEALHAVHAMQAMIEPRLHEQRGDLAGHPLLRAWAGK
LTGHVVRIAANLHAAHCAARKVLPWAEPISGEVMRAAVAYCEPLIAHMRAVLGDAVMS
DADRVARRVRAIIARYAAHGQITERMIYQAMRTESREMIERALQTLLKDGDLEGPLKV
TGRKGGRPSKVYRVLIAPNATSAATTTPPGASYAAPEPAPEPAPEPAPEPAPEPAPEP
APEPAPEPEPVPPAAPPSAATNAAAPASKRVISMPPTPPAWYDVVKPLTQRLPATLSA
EMGAPAGQPLGILIRRNDRPASSPDATLYIAPFDLPEGVSRAEAIAAGVQHVLAELRR
RWPDAHPASAEGAEGAEGDEGDEGDNDLPPLPAGVKPSAWRAVNWRYVMHLATKRPAD
WERGVRTHAVLKGIPPEALLAAAQARAGL"
misc_feature complement(369398..370534)
/locus_tag="Caur_0284"
/note="Protein of unknown function (DUF3987); Region:
DUF3987; pfam13148"
/db_xref="CDD:205329"
gene complement(371491..372018)
/locus_tag="Caur_0285"
/db_xref="GeneID:5824942"
CDS complement(371491..372018)
/locus_tag="Caur_0285"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633926.1"
/db_xref="GI:163845882"
/db_xref="GeneID:5824942"
/translation="MTNDTTPMSNVDQRRIRAALRIIVLASLYAERVAREHIPDSDAL
DELQGYIALIRDAAAIAGAELDGFESQLIAETVTHLNAHEVVRLFAEHHAAFFAKVAI
AVANAAADRALCDIRPGRKPGPAIEEEKLQAALDYYERNAGCITLEEAATRHCIAPRT
LSRYRSQRRKQANNQ"
gene complement(372098..372427)
/locus_tag="Caur_0286"
/db_xref="GeneID:5824943"
CDS complement(372098..372427)
/locus_tag="Caur_0286"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633927.1"
/db_xref="GI:163845883"
/db_xref="GeneID:5824943"
/translation="MTPPELPATGPEQPGDAPAAPARALVRAHRLIGYVVGHITLDGV
DHAIIHTQPHRYEVAPAHLVQPADADAALMDIRLALADAVALARWRGIEPATVLAALT
AIIAQAE"
gene complement(372641..373387)
/locus_tag="Caur_0287"
/db_xref="GeneID:5824944"
CDS complement(372641..373387)
/locus_tag="Caur_0287"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633928.1"
/db_xref="GI:163845884"
/db_xref="GeneID:5824944"
/translation="MKRHIGLAIHGGLALVIVGWSLWGAYTFWQFVFLTPWAAVGALL
LIEAFALAGFALHVLGIPTPVAAARHLLPVASAAPALHSIHALAKGVGDLEAWALAGI
VTLVLMLASYAVWRGLEALLLDRALLVQAEVEARAKHAEVAVQRIAAEAAAMVRIITA
MRNAVQAHERAALPPAADLVLARVASYPEPQPAAPDSSPSATARTSDAAPRYQCPHCG
APLANLGQYGAARKHGYCRQCRPGTEARNG"
gene complement(373384..374895)
/locus_tag="Caur_0288"
/db_xref="GeneID:5824945"
CDS complement(373384..374895)
/locus_tag="Caur_0288"
/note="KEGG: ana:alr9504 unknown protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633929.1"
/db_xref="GI:163845885"
/db_xref="GeneID:5824945"
/translation="MSNLTINRIGPEAQADSAWHDEDVEAARFAALDVRPAPARWRGR
DALGVALAGLVALGGWLALVIVFWVAARITESAYPPAPGWVLFWQVLLGITASAPAWL
GILAASVWVYERRIYARRANVIRDKLMNPVPAHLINQLTLPSYYALFERAAALEREVA
PYRAYRGVESLSLSASAAKPSGEEARKALESVVTPAIERLDDWVTDVAAREAHILVSG
KTASGKTTTGAALLARRIDAGDAICVIDPHHEPGKWWGIDAIGAGRDYAAIGAALDAL
DAEMTERYRRLADGEPPGQRLTVLIDEAPAIAAALERRWKALATRLGSEARKVGIALI
ILSQSPLVEDLMMNSVMRRNYTIIGLDMASIRVMLRDARNARDILATLEGRPYPALRE
VDGEFRICDRTGIHQVRPQRSPNVWRLPVCDEAASGPAQTDRRADAETIERLKAFIRA
GITRDEARAQGVAFDNSDWTRARREVEAETELLNGLLVASPRDGLRATTEVQG"
misc_feature complement(373750..>374022)
/locus_tag="Caur_0288"
/note="AAA-like domain; Region: AAA_10; pfam12846"
/db_xref="CDD:193320"
gene complement(375155..375367)
/locus_tag="Caur_0289"
/db_xref="GeneID:5824946"
CDS complement(375155..375367)
/locus_tag="Caur_0289"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633930.1"
/db_xref="GI:163845886"
/db_xref="GeneID:5824946"
/translation="MISEEARRLALAIWAEQAASGIGPAMVEAERLAEWLANRTYPLT
LLERAANGDVTALLAVRIEAGLPAIV"
gene complement(375521..375757)
/locus_tag="Caur_0290"
/db_xref="GeneID:5824947"
CDS complement(375521..375757)
/locus_tag="Caur_0290"
/note="KEGG: xau:Xaut_0314 putative transcriptional
regulator, XRE family"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_001633931.1"
/db_xref="GI:163845887"
/db_xref="GeneID:5824947"
/translation="MNSHLRILIAQKELRERRRLSVRVIAEESGASRSAIERLMNNTI
REVPLDDLARLCVWLDCQPGDILRLEPLPEEPAR"
misc_feature complement(375545..375748)
/locus_tag="Caur_0290"
/note="Cro/C1-type HTH DNA-binding domain; Region: HTH_26;
pfam13443"
/db_xref="CDD:205621"
gene 375923..377446
/locus_tag="Caur_0291"
/db_xref="GeneID:5824948"
CDS 375923..377446
/locus_tag="Caur_0291"
/note="PFAM: Resolvase domain; Recombinase;
KEGG: bja:bll1959 DNA invertase"
/codon_start=1
/transl_table=11
/product="resolvase domain-containing protein"
/protein_id="YP_001633932.1"
/db_xref="GI:163845888"
/db_xref="InterPro:IPR006118"
/db_xref="InterPro:IPR006119"
/db_xref="InterPro:IPR011109"
/db_xref="GeneID:5824948"
/translation="MHAVIYARVSTEEQGDNFSIPAQLAACREYAERNGLQVVAECID
TMSGARLDRPGLQQVRDLVSQQLVQAVIVYHQDRLSRNLAHFLYLRDEFQNARIALHF
TTLGQARDTPEDKLIQNMIGSFAEHERLRIIERTKQGRRARLLSGKPLGLGNHPAYGY
HWHGTKHDRHLHINEAEAAIVRRIFAWALEGVPTQRIAKLLTDMGVTPRGRAGRPPRP
EWDHTTVAGMLRNPVYKGQYYSAAHNLFVPVPAIVDAETWEAVQEQLTRNQAMAKRNA
KRVYSLRGRIRCGICGNRMSGNGAGTRASGKTYHYYMCHAAKGALIASCNHGTSYRAE
RLEALVWQWVIETVLDETRLVRAIEAARANEAGQREALEHERAAYARQIAEAGTRTAR
LIELYTAGVCTLDEVAATKKQYELQRQSAQRELDRIDAQLAALNSHHANRDALLAMAR
ALKAALQIEATPEEQMKVYEALDVQVVVRENNIDVRAVLTGDAGTFLIAGEPISSTR"
misc_feature 375923..376525
/locus_tag="Caur_0291"
/note="Site-specific recombinases, DNA invertase Pin
homologs [DNA replication, recombination, and repair];
Region: PinR; COG1961"
/db_xref="CDD:32144"
misc_feature 375935..376339
/locus_tag="Caur_0291"
/note="Serine Recombinase family, catalytic domain; a DNA
binding domain may be present either N- or C-terminal to
the catalytic domain. These enzymes perform site-specific
recombination of DNA molecules by a concerted, four-strand
cleavage and rejoining...; Region: Ser_Recombinase;
cd00338"
/db_xref="CDD:58115"
misc_feature order(375944..375946,375950..375952,376151..376156,
376163..376165)
/locus_tag="Caur_0291"
/note="catalytic residues [active]"
/db_xref="CDD:58115"
misc_feature 375950..375952
/locus_tag="Caur_0291"
/note="catalytic nucleophile [active]"
/db_xref="CDD:58115"
misc_feature 376445..376726
/locus_tag="Caur_0291"
/note="Recombinase; Region: Recombinase; pfam07508"
/db_xref="CDD:203658"
gene complement(377436..377510)
/locus_tag="Caur_0292"
/pseudo
/db_xref="GeneID:5824949"
gene complement(378519..379559)
/locus_tag="Caur_0293"
/db_xref="GeneID:5824950"
CDS complement(378519..379559)
/locus_tag="Caur_0293"
/note="PFAM: Vitamin K epoxide reductase;
KEGG: rrs:RoseRS_0493 vitamin K epoxide reductase"
/codon_start=1
/transl_table=11
/product="vitamin K epoxide reductase"
/protein_id="YP_001633933.1"
/db_xref="GI:163845889"
/db_xref="InterPro:IPR011767"
/db_xref="InterPro:IPR012932"
/db_xref="GeneID:5824950"
/translation="MRTRWLWVGLLSSLLVIVEWLSLPDALAQSPVARAVLFFSPTCP
HCHVVLDEVLPPLQARYGDQLHILTIDVTTPDGMALYEAAITTFAVPRERFGVPALFF
EQVHLVGSTEIPAQLPGLIEQALTTGGSRWPPIPGLEPYITRLEAGTPSLPSASASTS
PFSRDPANTLALLVLTGMVIVIFITIRRLRWPFDRSLPASSNRLIPVFAVVGLVLAGY
LAVVELSQQSAVCGPIGDCNLVHQSPYARIAGIPVGLVGVAGYLAILGAWMINYVRDW
RVARQLLVGFVLVGTLVSLYLTFLEPFVIGATCLWCLLSAITMTTLLWLVALPVDRPV
MRGRRSLSAAKR"
sig_peptide complement(379473..379559)
/locus_tag="Caur_0293"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.636) with cleavage site probability 0.570 at
residue 29"
misc_feature complement(379197..379454)
/locus_tag="Caur_0293"
/note="Thioredoxin-like domain; Region: Thioredoxin_2;
pfam13098"
/db_xref="CDD:205279"
misc_feature complement(378570..>378866)
/locus_tag="Caur_0293"
/note="Family of likely enzymes that includes the
catalytic subunit of vitamin K epoxide reductase; Region:
VKc; smart00756"
/db_xref="CDD:197861"
gene 379922..381352
/locus_tag="Caur_0294"
/db_xref="GeneID:5824951"
CDS 379922..381352
/locus_tag="Caur_0294"
/note="KEGG: ava:Ava_4725 polymorphic membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633934.1"
/db_xref="GI:163845890"
/db_xref="GeneID:5824951"
/translation="MERHNTVLSLPTLRGLVGKLVYTSGSHAFSRSILKGRRYAQDRW
GSFIESRSWGWIMLMIVAGVVGGWLLLHNARPTLSAGSIVVTTTDDELNSDGDCSLRE
AIQAVNTQSPVDACPTGSGNDTITLPAGVYTLNIAGAGEDNNTTGDLDIFATASAVTR
TLIIQGNGASTTVVDGNQLDRVFHLVARAPVRFQDDLLVLRDLTVRNGRLPAATREGG
AGLLSWGRLELYNVIIENNATTGTSSSDVGGGFCIGCGPGTGSGYLENVIVRNNAAQR
GGGVFSNRPLTITASSIISNTAVARGAIENYGALTLINVTVSNNFASNNTGGIGHFAG
SLSVLNSTISHNTSRGILFDAPATLKNTLLAYNTPGGNCFISTPPTSQGYNLSNDNSC
ASLLTASGDLNNVDPQLGPLQNNGGFTPTRALALTSPAVNAGTNSDCPATDQRGVTRP
QDGTCDIGAYELQVQRVHLPLVLKQS"
misc_feature 380168..>381337
/locus_tag="Caur_0294"
/note="Acinetobacter rhombotarget A; Region: GlyGly_RbtA;
TIGR04212"
/db_xref="CDD:211935"
misc_feature 380168..380245
/locus_tag="Caur_0294"
/note="CSLREA domain; Region: CSLREA_Nterm; TIGR04214"
/db_xref="CDD:211937"
gene 381515..382009
/locus_tag="Caur_0295"
/db_xref="GeneID:5824952"
CDS 381515..382009
/locus_tag="Caur_0295"
/note="KEGG: rrs:RoseRS_1018 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633935.1"
/db_xref="GI:163845891"
/db_xref="GeneID:5824952"
/translation="MITKLFSHLTGGFIMIIFGAIFVGVGLFARDWMVPSSHLSASGV
VVDLDEVRSSRGSTGYKAVVEFTTSTGQVVRFQDPTSSNPPAYRRGQEVTVLYDPENP
EFAVIDSPFTWLPSTVFIGFGGLFVVLGIFALLNWLLILLKLGGILGVLGLLLRRSRS
PVSH"
sig_peptide 381515..381604
/locus_tag="Caur_0295"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.740) with cleavage site probability 0.724 at
residue 30"
misc_feature <381629..381850
/locus_tag="Caur_0295"
/note="Protein of unknown function (DUF3592); Region:
DUF3592; pfam12158"
/db_xref="CDD:204837"
gene 382247..383155
/locus_tag="Caur_0296"
/db_xref="GeneID:5824953"
CDS 382247..383155
/locus_tag="Caur_0296"
/note="KEGG: rca:Rcas_0402 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633936.1"
/db_xref="GI:163845892"
/db_xref="InterPro:IPR004829"
/db_xref="GeneID:5824953"
/translation="MPITRFVLIAVILALSACSSGGSSTVEPSPVAVNPTPTVQPSPV
AENPTPTVQPSPVAANPSPTVQPSPVVENPTPTVQPSPVAENPTAPVPPVAAAGQCQN
PYYPVVQGATWQYQISGASSDTFVRTITQVREDGFDDQDVFSSGATRQGSWQCQQGNL
IGLSAGSNPSVALSDQMNFTFTVESNTGISFPADPQPGAEWTQTIVYGGQSDIGGTTV
ALRNTMQLSCKAIGVERVSVPVGNLEALRVDCTTRFDISFAGATALSTTTTGSAWYAS
GVGLVKSRDSSDTGVTEIVLLSYSIP"
sig_peptide 382247..382324
/locus_tag="Caur_0296"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.708 at
residue 26"
misc_feature <382328..>382489
/locus_tag="Caur_0296"
/note="DNA polymerase III subunits gamma and tau;
Provisional; Region: PRK14950"
/db_xref="CDD:184914"
gene 383184..384170
/locus_tag="Caur_0297"
/db_xref="GeneID:5824954"
CDS 383184..384170
/locus_tag="Caur_0297"
/note="KEGG: mlo:mlr7467 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633937.1"
/db_xref="GI:163845893"
/db_xref="GeneID:5824954"
/translation="MWDFSIGKAFSLLIRTTPFIGFRFAIYFGITLAYIVATGGGAGI
GYLIGSVLGDAETAGGSAFWGGLFGFGFVSGALYFAREYLMYIVKAGHIAVLVRLMDD
QPIPEGTGQIAYASQIVKARFAEASLLFGLDQLIKGIIRTVNSTLLTISSFLPIPGLT
NAMEFVTAVIRFSLTYVDEAILAYIIRTDQANSWASARDGVILYAQNYRLLLKNAVFL
TIFAWILSFVIFLIVIAPVAALVSVMPGLGGFWTLIIAIITAYALKAALIDPFAMACI
VQVYFQAIAGQTPSPEWVDRLNSLSAQFRELGEKAAAAMGGSSRLPISTWKG"
gene 384353..386542
/locus_tag="Caur_0298"
/db_xref="GeneID:5824955"
CDS 384353..386542
/locus_tag="Caur_0298"
/note="TIGRFAM: polymorphic outer membrane protein;
PFAM: Polymorphic membrane protein Chlamydia;
KEGG: rrs:RoseRS_4272 hypothetical protein"
/codon_start=1
/transl_table=11
/product="polymorphic outer membrane protein"
/protein_id="YP_001633938.1"
/db_xref="GI:163845894"
/db_xref="InterPro:IPR003368"
/db_xref="InterPro:IPR006626"
/db_xref="GeneID:5824955"
/translation="MTITRFPRMLALLIVMALIVGGLPVRSMYAAGFVVNSLGDTAMP
TAGDGFCTLREAIASANNAGNGDCGPNSAADDTITFSVSGTITLAAVLPFIAGGAGAL
TIDGGGNIAISGGGSDQVLLINSDANLTLQRLTITNGYSLGFGGGIQNSGTLTVTNSV
LSNNAAGFGAGIDNTGTLTITNSTFSNNAATTSGGGIYNAGTLTITNSSFSNNAATIS
GGGISNDTNGTLTITNNTLSNNMADYGAGIYNDTNGTLTITNSTLSNNIASNSGGGMY
NSGTLTITNSTFSTNQTGAFDGGGIYNQGALTIANSTFSNNIATNGGGIYNANALTVT
NSTFEGNTVSSSGGGIYNDTVGTLAITNSTFSNNGAPNGGGIGSTGTLTLNNTIIANS
FGGDCRGSVASADHNLIENTGTNACNLTNGVNGNIIGQDPNLGTLAGTPAYFPLNTDS
PAIDKGSNAICAAAPVNNQSQNGVTRPQDGNGDSSATCDIGSYELDVTPPTVTSITRA
DPNPTNAASVSFTVTFSEAVTGVDSNDFSLNPTGGVSGAGITGVSGAGSSYTVTVNTG
TGSGTLGLTLVDNDSIVDVAGNPLAGLGAGNGNFTGESYTVDKGAPTVTAITRAGPNP
TGAASVNFTVTFSEAVTGVDSGDFSLTTTDSLSGVGITGVSGSGSSYTVTVNTGTGSG
TLRLDVPATATITDPSGNSLSSLPFTTGESYLVRSSFVYLPLVVKAP"
sig_peptide 384353..384436
/locus_tag="Caur_0298"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.975) with cleavage site probability 0.736 at
residue 28"
misc_feature 384449..384535
/locus_tag="Caur_0298"
/note="CSLREA domain; Region: CSLREA_Nterm; TIGR04214"
/db_xref="CDD:211937"
gene 388020..390056
/locus_tag="Caur_0299"
/db_xref="GeneID:5824956"
CDS 388020..390056
/locus_tag="Caur_0299"
/note="KEGG: aba:Acid345_2296 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633939.1"
/db_xref="GI:163845895"
/db_xref="GeneID:5824956"
/translation="MPVGAPDTNNGYGSTSQWEVMTNHILRQTRWSAPERSHCCRHEE
GRQEMVQPLSGCSVAVPVRNLPYPTAQKERRMSNHSGHFFAGRQPTRHRLIGIAGVLL
VSVILMIGSVQAAPLGTAFTYQGQLQKNGSPYNGTCSFQFSLWDAVSGGAQVGSTLTQ
TGVTVSNGLFTVTLDFGTGVFTGDVRWLQIAVQCSGDSGYTTLSPRHALTAAPYALGL
RPGAQVIGSVVDASLLVQNTAAGGFGYGVFVQTDSTSSDAAGVMGYAAATSGVTYGVY
GRSNSPNGTGVYGIHQASSGSAPGIHGVTRSTSNDAVAILGEVPFSSLPGATSTAVRG
LNKGTGGTGIGVWGSHDGGGWGVYGTSVSGIGVYGRTTTETGISTGVFGETTSTSGRG
VYGLAVANTGTTYGVYGGSISPSGTGVYGVATDTSGINYGVRGKSNSSNGYGGYFENT
SDGIALYAEGNGNGRNKAALRVNNTDTGQGMAAYFTNNSGFHTAHFYNAQSGNVLYLQ
GSSTGTGDFITAVNNAETNTLFRVTSTGQVQSDVGFSTPAADFAEMLPAVSGLEPGDV
LVIGADGRLARSTQPYQATVVGVYSTRPGFIGGQPVDGNLEGHIPLAVVGVVPVKVST
ENGPIQPGDLLVASATPGHAMRAGTNPPQGTVIGKALEGLDDGTGVIRMLVVLQ"
gene 390067..390357
/locus_tag="Caur_0300"
/db_xref="GeneID:5827809"
CDS 390067..390357
/locus_tag="Caur_0300"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633940.1"
/db_xref="GI:163845896"
/db_xref="GeneID:5827809"
/translation="MRGIRRLLVPGLIPLLLLLSALALASSGGPYNLNWWTVDGGGYT
VSTGGSYALGGTVGQSDAGVLSGGSYTLRGGFWGGVEVTYQVWTPLIMRDSP"
sig_peptide 390067..390144
/locus_tag="Caur_0300"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.949 at
residue 26"
gene complement(390570..391142)
/locus_tag="Caur_0301"
/db_xref="GeneID:5827810"
CDS complement(390570..391142)
/locus_tag="Caur_0301"
/note="TIGRFAM: 2'-5' RNA ligase;
PFAM: Phosphoesterase HXTX;
KEGG: deb:DehaBAV1_1257 2'-5' RNA ligase"
/codon_start=1
/transl_table=11
/product="2'-5' RNA ligase"
/protein_id="YP_001633941.1"
/db_xref="GI:163845897"
/db_xref="InterPro:IPR004175"
/db_xref="InterPro:IPR014051"
/db_xref="GeneID:5827810"
/translation="MSQTPPAEPTLRLFIALELPQPVRDELKRIQQRLQGHSRAARWT
DPTGMHLTLHFLGETPERLVEPLLTGLRSVSAPALSLTLDRLGCFPANGALRVVWVGL
RGDLAALATLHRSLATVIQSLGLPTETRPFVPHITLARARPNATAADLRALRTALDTV
APQSLTWQSDSPRLFRSQLTPRGAVYTVLG"
misc_feature complement(390576..391109)
/locus_tag="Caur_0301"
/note="2'-5' RNA ligase; Region: 2_5_ligase; TIGR02258"
/db_xref="CDD:162789"
misc_feature complement(390846..391094)
/locus_tag="Caur_0301"
/note="LigT like Phosphoesterase; Region: LigT_PEase;
pfam02834"
/db_xref="CDD:202422"
gene complement(391419..392201)
/locus_tag="Caur_0302"
/db_xref="GeneID:5827811"
CDS complement(391419..392201)
/locus_tag="Caur_0302"
/note="PFAM: DSBA oxidoreductase;
KEGG: rca:Rcas_3717 DsbA oxidoreductase"
/codon_start=1
/transl_table=11
/product="DSBA oxidoreductase"
/protein_id="YP_001633942.1"
/db_xref="GI:163845898"
/db_xref="InterPro:IPR001853"
/db_xref="GeneID:5827811"
/translation="MRVRLLVLIMLLSLTACTAATPVPSPTAIPRLPTVTPEPLSQST
PTPRIIRLSESPLPVFTPTPIPTPVISADGITTASMAQLGISAEPYAILGDPNAPVTI
IEFTDFGCTFCRRHHVLTFPALREEFISSGQVFYVVRQLPVTSPHGDQAALAALCAGE
QGKYWEMHDQLFAAGDAWYSDATTARRRIIALATDLGLDSAVLQRCMEHPATQATLAR
HVSEAHALRVFGTPTFFINNQLFAGAQPIARWRDVLEGGGRR"
sig_peptide complement(392142..392201)
/locus_tag="Caur_0302"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.780 at
residue 20"
misc_feature complement(391437..391928)
/locus_tag="Caur_0302"
/note="Thioredoxin; Region: Thioredoxin_4; pfam13462"
/db_xref="CDD:205640"
misc_feature complement(391437..391901)
/locus_tag="Caur_0302"
/note="DSBA-like thioredoxin domain; Region: DSBA;
pfam01323"
/db_xref="CDD:201729"
gene complement(392574..394946)
/locus_tag="Caur_0303"
/db_xref="GeneID:5827812"
CDS complement(392574..394946)
/locus_tag="Caur_0303"
/EC_number="3.4.21.53"
/note="KEGG: rca:Rcas_2557 ATP-dependent protease La;
TIGRFAM: ATP-dependent protease La;
PFAM: peptidase S16 lon domain protein; AAA ATPase central
domain protein; ATPase associated with various cellular
activities AAA_5;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease La"
/protein_id="YP_001633943.1"
/db_xref="GI:163845899"
/db_xref="InterPro:IPR001984"
/db_xref="InterPro:IPR003111"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR003959"
/db_xref="InterPro:IPR004815"
/db_xref="InterPro:IPR008268"
/db_xref="InterPro:IPR008269"
/db_xref="InterPro:IPR011704"
/db_xref="GeneID:5827812"
/translation="MNDPNPMQRPPMPEIPDVLPVLPINNAILFPGMFLPLVVSGEAW
VRLVDEAALSTKIIGVFRRIQSGAEFEPEMLAQTGTAALIVRMMRLPQGGVQLLLQGQ
ARIKVQRWVTVKPYPQAHVTVALDPVDVSMETTGLARAVLAGFQQIVEQSPNLPDELA
IAAANAPHPGMLADLIAANLNLNLDDQQKVLDTFDVHERLQLVLRLLEREREILLIGR
KAQEEVSKNQREYVLRQQLEAIKRELGETDDHAAEIAELRRRIEEANLPAEARQEAER
ELLRLERMPPGAAEYTVARTYLDWLLDLPWHTSTEDNLDITQARQVLDEDHYDLERIK
ERIIEYLAVRKLRREEGADNEARGPILCFVGPPGVGKTSLGASIARALGRKFVRVALG
GVRDEAEIRGHRRTYIGALPGRIIQGLSRAKSNNPVLLLDEVDKLSIGFQGDPAAALL
EVLDPEQNVAFVDRYLDVPFDLSKVLFVCTANRADTIPPALLDRMELLELAGYTEQEK
LEIARRYLIPRQRREQGMTNRGPELTTAALQRLIREYTHEAGVRDLERRIGAIYRKMA
TRLASEQTLPDQVDAADLDDLLGPPRFRSETILGDNEVGVVTGLAWTPTGGDVLFVEV
SVIPGNGQLILTGQLGDVMKESARAALTYARSRASALGIDPEVFQKSDIHIHVPAGAV
PKDGPSAGITIASALISALTRREVDKRIAMTGEVTLRGKVLPIGGVKEKLLAAQRAGV
RKVLLPTENEIDLRDVPAETKEQLEIVLVKHMDEVLHELGLEIAPQPVSE"
misc_feature complement(392577..394919)
/locus_tag="Caur_0303"
/note="ATP-dependent Lon protease, bacterial type
[Posttranslational modification, protein turnover,
chaperones]; Region: Lon; COG0466"
/db_xref="CDD:30814"
misc_feature complement(393456..393947)
/locus_tag="Caur_0303"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(393831..393854)
/locus_tag="Caur_0303"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(393501..393503,393651..393653,
393828..393851))
/locus_tag="Caur_0303"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(393648..393665)
/locus_tag="Caur_0303"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(393465..393467)
/locus_tag="Caur_0303"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature complement(392610..393182)
/locus_tag="Caur_0303"
/note="Lon protease (S16) C-terminal proteolytic domain;
Region: Lon_C; pfam05362"
/db_xref="CDD:191262"
gene complement(394943..395350)
/locus_tag="Caur_0304"
/db_xref="GeneID:5827813"
CDS complement(394943..395350)
/locus_tag="Caur_0304"
/note="KEGG: rrs:RoseRS_2779 molecular chaperone (small
heat shock protein)-like protein"
/codon_start=1
/transl_table=11
/product="molecular chaperone (small heat shock
protein)-like protein"
/protein_id="YP_001633944.1"
/db_xref="GI:163845900"
/db_xref="InterPro:IPR002068"
/db_xref="GeneID:5827813"
/translation="MSDSSYIRILRTRLPYVQFDTRPWTPPLNVFETDREMILVIELA
GVDPATLQIEAYPELVRIAGARQLTLPTGLRRLHRMEIAAGVFQIEVPFERLIDPEQT
SARSVHGLLEIRLPFAGRTLRQVVIPVLEGEQS"
misc_feature complement(395003..395323)
/locus_tag="Caur_0304"
/note="Molecular chaperone (small heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: IbpA; COG0071"
/db_xref="CDD:30420"
misc_feature complement(395003..395266)
/locus_tag="Caur_0304"
/note="Alpha-crystallin domain (ACD) of
alpha-crystallin-type small(s) heat shock proteins (Hsps).
sHsps are small stress induced proteins with monomeric
masses between 12 -43 kDa, whose common feature is the
Alpha-crystallin domain (ACD). sHsps are generally...;
Region: ACD_sHsps-like; cd06464"
/db_xref="CDD:107221"
misc_feature complement(order(395021..395026,395084..395086,
395216..395221,395225..395227,395231..395233,
395252..395266))
/locus_tag="Caur_0304"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:107221"
gene complement(395369..395629)
/locus_tag="Caur_0305"
/db_xref="GeneID:5827814"
CDS complement(395369..395629)
/locus_tag="Caur_0305"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633945.1"
/db_xref="GI:163845901"
/db_xref="GeneID:5827814"
/translation="MPIYSIDFRPFDYLTAELSALWWFYLSQGLALIALGVAVIIWPE
LLAFLAAAFFIAIGIVLLVLGWRVRQVKRRYELFKRSFIIEA"
gene complement(395749..396066)
/locus_tag="Caur_0306"
/db_xref="GeneID:5827815"
CDS complement(395749..396066)
/locus_tag="Caur_0306"
/note="KEGG: rca:Rcas_2941 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633946.1"
/db_xref="GI:163845902"
/db_xref="GeneID:5827815"
/translation="MLVRRMSLEELAVAVGLPVPVLQYLTDMGYIHPVPELPAAEFAE
LRLIRRLINDLEVPSEAVDIILHMRRRMLEMQREIARLRAELAYRRAFEHSRNWIDAE
WYE"
gene complement(396085..397275)
/locus_tag="Caur_0307"
/db_xref="GeneID:5827816"
CDS complement(396085..397275)
/locus_tag="Caur_0307"
/EC_number="1.3.1.74"
/note="KEGG: rca:Rcas_1750 2-alkenal reductase;
PFAM: peptidase S1 and S6 chymotrypsin/Hap;
SMART: PDZ/DHR/GLGF domain protein"
/codon_start=1
/transl_table=11
/product="2-alkenal reductase"
/protein_id="YP_001633947.1"
/db_xref="GI:163845903"
/db_xref="InterPro:IPR001254"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR001940"
/db_xref="GeneID:5827816"
/translation="MERQSGRGRWIVLFIELALLVVIAGAFVWTAFTGNRPATIVVAP
SPTPVVLPAPTVVPLTATDLEAQIAAVYREAGVSVVNITSRSISYDFFFNPVPRQGSG
SGFFYDDQGHIVTNYHVIADADELQVTLADGQTVPARIVGSDPSNDLAVIKVDLPTAT
IRPLPIGDSTQVYVGQFVLAIGNPFGLERTLTFGIVSALGRVIESPNQRFIGEVIQSD
VAINPGNSGGPLLDLSGRVIGVNSAILSPSGANAGIGFAISSRTVQRVVPVLIREGRY
PHPSLGVRVIELTPQRASLFERAGMQLPVTQGLLIAELITNGPAAQAGLRGPDRLVRV
GNLNLPVGGDVIVAVNDRPITTSQDLLVYLETETQVGETVQVKIIRDGREQVVPVTLA
ELQF"
misc_feature complement(396556..396972)
/locus_tag="Caur_0307"
/note="Trypsin-like peptidase domain; Region: Trypsin_2;
pfam13365"
/db_xref="CDD:205544"
misc_feature complement(396109..396441)
/locus_tag="Caur_0307"
/note="PDZ domain of tryspin-like serine proteases, such
as DegP/HtrA, which are oligomeric proteins involved in
heat-shock response, chaperone function, and apoptosis.
May be responsible for substrate recognition and/or
binding, as most PDZ domains bind...; Region:
PDZ_serine_protease; cd00987"
/db_xref="CDD:29044"
misc_feature complement(order(396193..396198,396205..396210,
396421..396423,396427..396438))
/locus_tag="Caur_0307"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29044"
gene complement(397414..398340)
/locus_tag="Caur_0308"
/db_xref="GeneID:5827817"
CDS complement(397414..398340)
/locus_tag="Caur_0308"
/note="PFAM: heat shock protein DnaJ domain protein;
chaperone DnaJ domain protein;
KEGG: rrs:RoseRS_3094 chaperone DnaJ domain protein"
/codon_start=1
/transl_table=11
/product="chaperone DnaJ domain-containing protein"
/protein_id="YP_001633948.1"
/db_xref="GI:163845904"
/db_xref="InterPro:IPR001623"
/db_xref="InterPro:IPR002939"
/db_xref="InterPro:IPR003095"
/db_xref="GeneID:5827817"
/translation="MEFKDYYAILGLSPDADEQAIKQAYRKLARQYHPDVNPGDKKAE
ERFKEINEAYQALSDPERRRKYDELRSYYQRWQRSGGRGDFNWSQWQAAPGQQVYTYN
VSPEDLEDLFGADSPFSDFFSSIFGQPQFRRASRAARGRDLEAPVTVSLEEAFSGTTR
SLQVGDRRIEARIPRGVRTGTRVRLSGQGAPGIGGGPDGDLYLVVEVAPHPQFERDGD
DLTTTIAVDAFTAAVGGEVRVPTIDGSVTLKIPPRTQADRVFRLRGKGMPRLENPAER
GDLFARVKLVLPEPLSDAELATLRELVRKRQR"
misc_feature complement(397435..398340)
/locus_tag="Caur_0308"
/note="chaperone protein DnaJ; Provisional; Region:
PRK14299"
/db_xref="CDD:184613"
misc_feature complement(398164..398328)
/locus_tag="Caur_0308"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of Hsp70s; Region: DnaJ;
cd06257"
/db_xref="CDD:99751"
misc_feature complement(order(398185..398190,398197..398202,
398209..398211,398236..398244))
/locus_tag="Caur_0308"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
misc_feature complement(397468..397917)
/locus_tag="Caur_0308"
/note="C-terminal substrate binding domain of DnaJ and
HSP40; Region: DnaJ_C; cd10747"
/db_xref="CDD:199909"
misc_feature complement(order(397771..397773,397843..397845,
397849..397863,397906..397908))
/locus_tag="Caur_0308"
/note="substrate binding site [polypeptide binding]; other
site"
/db_xref="CDD:199909"
misc_feature complement(order(397468..397482,397573..397584,
397642..397647,397654..397659))
/locus_tag="Caur_0308"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:199909"
gene complement(398453..399634)
/locus_tag="Caur_0309"
/db_xref="GeneID:5827818"
CDS complement(398453..399634)
/locus_tag="Caur_0309"
/note="KEGG: cya:CYA_1262 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633949.1"
/db_xref="GI:163845905"
/db_xref="GeneID:5827818"
/translation="MIDREAVQQIRADLGALQPPVLSLYVEVDPTRPENERRAWVLRA
RNAVKALAVPAEVEQVVLAALEAEIAPEARTLALFAAAPATERKSATVAVTKVPLHIT
LPLIDITNGKVEARWGEPYIAPLIYALDQYERTAVVWLRGEGWRFFEVFLGEIVEHTD
VFRSVEADLWQQVTEFDPRRLRDDLRAQAMGNRDRFARRMENIAARYLQRLAELTERA
LDHFRIRRLVLLGREEATKQFADLLPRSVRQMVIAHVADLPHPDASPAHVLAKVLPAL
EQVEQSHEQALLEQVTRQPGVWGIDPTLNALQEGRLSVLIAPWQLDAQVWMASNGLLA
GSREQIATLVPDGEAQPVALRDVLVDACAAFATRLEFVSGPAQDHLSRDFGGLAGLLR
W"
misc_feature complement(398459..>399052)
/locus_tag="Caur_0309"
/note="Peptide chain release factor 1 (eRF1) [Translation,
ribosomal structure and biogenesis]; Region: eRF1;
COG1503"
/db_xref="CDD:31692"
gene complement(399655..399876)
/locus_tag="Caur_0310"
/db_xref="GeneID:5827819"
CDS complement(399655..399876)
/locus_tag="Caur_0310"
/note="KEGG: rca:Rcas_1373 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633950.1"
/db_xref="GI:163845906"
/db_xref="GeneID:5827819"
/translation="MTELGRWLIGAGVILVVIGLVVLAAGRLPWLGRLPGDILIERDN
LTIFIPLGTMLVVSLILTVIANLIARWWR"
sig_peptide complement(399802..399876)
/locus_tag="Caur_0310"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.883) with cleavage site probability 0.872 at
residue 25"
misc_feature complement(399673..>399798)
/locus_tag="Caur_0310"
/note="Protein of unknown function (DUF2905); Region:
DUF2905; pfam11146"
/db_xref="CDD:204596"
gene 400127..401062
/locus_tag="Caur_0311"
/db_xref="GeneID:5827820"
CDS 400127..401062
/locus_tag="Caur_0311"
/note="PFAM: band 7 protein;
KEGG: rca:Rcas_2987 band 7 protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633951.1"
/db_xref="GI:163845907"
/db_xref="InterPro:IPR000163"
/db_xref="InterPro:IPR001107"
/db_xref="GeneID:5827820"
/translation="MNQNRQPFPTSTMRGWSMSAAVGIVLLIMIAIFVVSNSVTTIEA
GTRGVLKTFGEITGVLDEGLHFRTPFITSVTVVEVRTQRYESNSSAASRDLQTVTTQV
VINYRPDASQVDRLVREIGVDYERRVVDPAIQEALKAATARFTAEELITRRPEVSDLI
LNILSERLTPRGVIVESVSITDFNFSPEFARAIEAKQVAEQDALRAARELERARIEAQ
QQVARAEAEAKARLEIARAEAESLRLLGEVVSPQLLQLRFIERWDGILPRLVSGDNGL
LTMLSIPTDGMLGETPTAQPTPPNSEQPTGTTGGE"
sig_peptide 400127..400243
/locus_tag="Caur_0311"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.936) with cleavage site probability 0.403 at
residue 39"
misc_feature 400190..>400717
/locus_tag="Caur_0311"
/note="Membrane protease subunits, stomatin/prohibitin
homologs [Posttranslational modification, protein
turnover, chaperones]; Region: HflC; COG0330"
/db_xref="CDD:30678"
misc_feature 400238..400720
/locus_tag="Caur_0311"
/note="Band_7_prohibitin. A subgroup of the band 7 domain
of flotillin (reggie) like proteins. This subgroup group
includes proteins similar to prohibitin (a lipid
raft-associated integral membrane protein). Individual
proteins of this band 7 domain family may...; Region:
Band_7_prohibitin; cd03401"
/db_xref="CDD:48213"
gene 401713..403020
/locus_tag="Caur_0312"
/db_xref="GeneID:5827821"
CDS 401713..403020
/locus_tag="Caur_0312"
/note="PFAM: periplasmic binding protein;
KEGG: rrs:RoseRS_3086 periplasmic binding protein"
/codon_start=1
/transl_table=11
/product="periplasmic binding protein"
/protein_id="YP_001633952.1"
/db_xref="GI:163845908"
/db_xref="InterPro:IPR002491"
/db_xref="GeneID:5827821"
/translation="MRRFLFRILALVLIHLLVACGNQQTSSPTLTAVPTNSTAAMTAP
TATAIPTVVPTVAPTVAVLEPPTANLTDECVSEFDPEIDYFPEKVTLSDATGWTIEYF
NHYKVITVLNPWRNADTQFQYILVQCGTPPPPASDNALIIEIPVQRVIAMSTTQLPHL
DGLGVLDKLIGVDSFLYINNEAVRKKIDAGELVEIGSGGQVNVEQALDLEPDLIMTYG
VGNPEYDAHPKLLEAGLNVVLNSEYMEGSPLGRAEWIKFTAAFFNQEAKANELYTAIA
QRYRDIAAKARAVAEKPTVFANAPFRGTWYMPGGKSYVAQLLADAGANYLWADDTSSG
SQQLSFEEVFERAQNASFWLNPGSAKSLSELQQMDERFTQFAAFQNGAVFNNNKRLNE
NGGNDYWETGVTNPHLILADLIKIFHPELLPDHELFFYQQLTP"
sig_peptide 401713..401790
/locus_tag="Caur_0312"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.958) with cleavage site probability 0.374 at
residue 26"
misc_feature 402127..402699
/locus_tag="Caur_0312"
/note="Periplasmic binding protein TroA_d. These proteins
are predicted to function as initial receptors in the ABC
metal ion uptake in eubacteria and archaea. They belong
to the TroA superfamily of helical backbone metal receptor
proteins that share a...; Region: TroA_d; cd01141"
/db_xref="CDD:29744"
misc_feature 402157..402864
/locus_tag="Caur_0312"
/note="Periplasmic binding protein; Region: Peripla_BP_2;
pfam01497"
/db_xref="CDD:144914"
misc_feature 402259..402261
/locus_tag="Caur_0312"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:29744"
gene 403030..403359
/locus_tag="Caur_0313"
/db_xref="GeneID:5827822"
CDS 403030..403359
/locus_tag="Caur_0313"
/note="KEGG: rrs:RoseRS_3087 ferredoxin-like protein"
/codon_start=1
/transl_table=11
/product="ferredoxin-like protein"
/protein_id="YP_001633953.1"
/db_xref="GI:163845909"
/db_xref="GeneID:5827822"
/translation="MSKPQMNPYVRHIFICTGRYCDPEGTAPQLYAQLAQLLGPLGNY
HNPCRVKRGTTPCLGVCSAGPIVVIYPEGIWYHHVDKTVLERIVREHLVQNRPVVEHI
FHQLHEQ"
misc_feature 403060..403302
/locus_tag="Caur_0313"
/note="Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd)
family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like
Fds) and proteins containing domains similar to TRX-like
Fd including formate dehydrogenases, NAD-reducing
hydrogenases and the subunit E of NADH:...; Region:
TRX_Fd_family; cd02980"
/db_xref="CDD:48529"
misc_feature order(403063..403065,403069..403071,403189..403197)
/locus_tag="Caur_0313"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48529"
misc_feature order(403075..403077,403090..403092,403198..403200,
403210..403212)
/locus_tag="Caur_0313"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:48529"
gene 403374..404462
/locus_tag="Caur_0314"
/db_xref="GeneID:5827823"
CDS 403374..404462
/locus_tag="Caur_0314"
/note="PFAM: transport system permease protein;
KEGG: rrs:RoseRS_3088 transport system permease protein"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="YP_001633954.1"
/db_xref="GI:163845910"
/db_xref="InterPro:IPR000522"
/db_xref="GeneID:5827823"
/translation="MSMTKTLSAAIQSTRWPRPGLQPLVLLAMVGVTLCIFLLSLSLG
SVSIPPEQVLSILLYQEAERKSWVTIIYDFRLPKALTAALAGAALGVSGLQMQTLFRN
PLADPFVLGISSGASLGVAIVVLSVGAANTALLAVAGLLGNVSLVVAASLGAGMVMMI
ILTLAQRVRSSITLLILGLMIGYVTSAVVSLLLYFSIAERIQAYIAWSFGNFGGVTWS
QMQVLAPTIGIGLILALLLTKVLNALLLGEAYARSMGMDIQLARCGIVLSSSVLAGTI
TAFCGPIAFLGIAIPHLCRALFRTADHRILLPACMWIGATIALLGDLIAQVPGYSIVL
PLNAINALFGAPIVMWVVLQRYRGVFGL"
sig_peptide 403374..403517
/locus_tag="Caur_0314"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.723) with cleavage site probability 0.283 at
residue 48"
misc_feature 403410..404444
/locus_tag="Caur_0314"
/note="ABC-type enterobactin transport system, permease
component [Inorganic ion transport and metabolism];
Region: FepG; COG4779"
/db_xref="CDD:34391"
misc_feature 403659..404429
/locus_tag="Caur_0314"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cd06550"
/db_xref="CDD:119348"
misc_feature order(403662..403664,403674..403682,404076..404081,
404085..404093,404097..404102,404106..404123,
404127..404135,404256..404258,404280..404282)
/locus_tag="Caur_0314"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
misc_feature order(403677..403679,403683..403685,403698..403700,
403890..403892,403896..403901,403908..403913,
403920..403925,403932..403934,403941..403946,
403950..403952,403983..403988,403998..404000,
404226..404228,404385..404387,404394..404399,
404406..404408,404415..404420,404427..404429)
/locus_tag="Caur_0314"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature order(403950..403952,404028..404030,404202..404204,
404214..404216,404349..404351,404376..404378)
/locus_tag="Caur_0314"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
gene 404459..405535
/locus_tag="Caur_0315"
/db_xref="GeneID:5827658"
CDS 404459..405535
/locus_tag="Caur_0315"
/note="PFAM: ABC transporter related;
SMART: AAA ATPase;
KEGG: rrs:RoseRS_3089 ABC transporter related"
/codon_start=1
/transl_table=11
/product="ABC transporter-like protein"
/protein_id="YP_001633955.1"
/db_xref="GI:163845911"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:5827658"
/translation="MSRSILVTEHLRIGYANRRGEARVVADQLNLTLNEGDVVCLLGP
NGIGKSTLLRTLIGMQAPLAGRVLLDGIDIATLKPRDIARRVSVVLTERIEVGQLSVY
HLVALGRYPYTNWIGKLTPHDEEVIQRALSAVQAEQLAGRFVHELSDGERQRVMVARA
LAQEPHVMVLDEPMAFLDLPRRIEMMRLLRRLAHEMRQAVILSIHDLDLAIRTADLLW
LMTPDGKIQAGAPEDLVLSGAFEKAFAGNNLVFDRFHGQFRLHEPPSRHAVLLGDGLI
YKWTMHALERAGYQCNQADDTAALHITIHGNEQNPLWLMQLNRQTVKNFHSLRDLVTF
LRGMPYPYQSQETSDDDHEPIFHR"
misc_feature 404468..405190
/locus_tag="Caur_0315"
/note="iron-dicitrate transporter ATP-binding subunit;
Provisional; Region: fecE; PRK11231"
/db_xref="CDD:183044"
misc_feature 404483..405142
/locus_tag="Caur_0315"
/note="ABC transporters, involved in the uptake of
siderophores, heme, and vitamin B12, are widely conserved
in bacteria and archaea. Only very few species lack
representatives of the siderophore family transporters.
The E. coli BtuCD protein is an ABC...; Region:
ABC_Iron-Siderophores_B12_Hemin; cd03214"
/db_xref="CDD:72973"
misc_feature 404585..404608
/locus_tag="Caur_0315"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72973"
misc_feature order(404594..404599,404603..404611,404729..404731,
404969..404974,405071..405073)
/locus_tag="Caur_0315"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72973"
misc_feature 404720..404731
/locus_tag="Caur_0315"
/note="Q-loop/lid; other site"
/db_xref="CDD:72973"
misc_feature 404897..404926
/locus_tag="Caur_0315"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72973"
misc_feature 404957..404974
/locus_tag="Caur_0315"
/note="Walker B; other site"
/db_xref="CDD:72973"
misc_feature 404981..404992
/locus_tag="Caur_0315"
/note="D-loop; other site"
/db_xref="CDD:72973"
misc_feature 405059..405079
/locus_tag="Caur_0315"
/note="H-loop/switch region; other site"
/db_xref="CDD:72973"
gene 405504..406079
/locus_tag="Caur_0316"
/db_xref="GeneID:5827659"
CDS 405504..406079
/locus_tag="Caur_0316"
/note="KEGG: rrs:RoseRS_3090 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633956.1"
/db_xref="GI:163845912"
/db_xref="GeneID:5827659"
/translation="MTTTNQSFIVEEPGNGTLEIFPLQPDEAALTALMTELFRDHWDK
IHFGPLIQGAVFEIKVTQPPQRIGMLDGYLTVDFGVWHFHLCIGEHKGSKTRPVDPEL
ARHRRTGRAEFYRRLNPDGTVGSWGIRLFNGKGENQIYIFLPNPFLTDEMKFRREPDW
SRLELWDDLRQRYLGLPPDPKDRSGRTMFHG"
gene complement(406302..406709)
/locus_tag="Caur_0317"
/db_xref="GeneID:5827660"
CDS complement(406302..406709)
/locus_tag="Caur_0317"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633957.1"
/db_xref="GI:163845913"
/db_xref="GeneID:5827660"
/translation="MCRKLTILARDSATRIVAQCEHGTIHLYWTRAALFLHPAELMPL
LALVQCWKPEFDEARSEPFLIIRQPDGSLHLWYHEIGVCLSQSDLYDLAALLWHAAAR
LKLLSPDSSPPPRHPLEPSRPVTCVLPRPEWRN"
gene complement(406719..407675)
/locus_tag="Caur_0318"
/db_xref="GeneID:5827661"
CDS complement(406719..407675)
/locus_tag="Caur_0318"
/note="PFAM: periplasmic binding protein;
KEGG: ana:alr2583 iron(III) dicitrate transport system
substrate-binding protein"
/codon_start=1
/transl_table=11
/product="periplasmic binding protein"
/protein_id="YP_001633958.1"
/db_xref="GI:163845914"
/db_xref="InterPro:IPR002491"
/db_xref="GeneID:5827661"
/translation="MHRMVLFAILVLLLLSACTSSTSTAQSLEVVSTTDSYRLIRHVF
GETQVPLNPSRVLALGEEGLLIDLIDSGMRPVAASVNLPDRVPLLSAEELAGIELFPS
AGDISLETLSTYQPDFIIGTEFFIDQIGYRQLSQIAPTVALSGATPLTQYIETLTVFG
RAEEALREVDALRAEIQRVAIARGTATQRVSLVTVYPGMNVALWFDGPSPIPLLVRAL
GLQIRPDPTTTTDLNIRNGRAFISLEQLSMADGDMIFLLQTADVEGEASAVAEMMDHP
LWQQLPAVQAQRVVELDRIGFPGLRGQRVLLTMLEEILASGT"
sig_peptide complement(407598..407675)
/locus_tag="Caur_0318"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.963 at
residue 26"
misc_feature complement(406755..407522)
/locus_tag="Caur_0318"
/note="Helical backbone metal receptor (TroA-like domain).
These proteins have been shown to function in the ABC
transport of ferric siderophores and metal ions such as
Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site
is formed in the interface between...; Region: TroA-like;
cl00262"
/db_xref="CDD:199270"
misc_feature complement(406797..407510)
/locus_tag="Caur_0318"
/note="Periplasmic binding protein; Region: Peripla_BP_2;
pfam01497"
/db_xref="CDD:144914"
misc_feature complement(order(407193..407195,407268..407270,
407277..407282))
/locus_tag="Caur_0318"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:29734"
gene complement(407692..408267)
/locus_tag="Caur_0319"
/db_xref="GeneID:5827662"
CDS complement(407692..408267)
/locus_tag="Caur_0319"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633959.1"
/db_xref="GI:163845915"
/db_xref="GeneID:5827662"
/translation="MPRLDKSVPTTADPLRWLSRDWLLVGNIGLLSGLLLSGLFWLVL
LPLVHLWLGVIGLLPLVIGMALIWFPGALAAVAVGKPGAALAVQVPQAIVLLLLTPID
GEVLLVCTFFALVAEPVIALCTRYRRLTPARLGWCGLFVGVGMVILFGWLFPFVFTSL
PLSAMIGCSAVGLTCLLGICAGWIGQRWLKA"
gene complement(408360..408932)
/locus_tag="Caur_0320"
/db_xref="GeneID:5827663"
CDS complement(408360..408932)
/locus_tag="Caur_0320"
/note="TIGRFAM: flavodoxin;
PFAM: flavodoxin/nitric oxide synthase;
KEGG: cyb:CYB_2267 flavodoxin"
/codon_start=1
/transl_table=11
/product="flavodoxin"
/protein_id="YP_001633960.1"
/db_xref="GI:163845916"
/db_xref="InterPro:IPR008254"
/db_xref="InterPro:IPR010086"
/db_xref="GeneID:5827663"
/translation="MIAVVYGSSTDNTKGAASLIADMLRAKTTVPVDLIDVATVKRDL
RPLLRYWVWIIGCPTWNIGELQDDWYDAFPLLDQLDLQGTIVALFGFGDQQGYPDTFQ
DALGILGRKVRERGAMIIGRWPIDGYDFFHSLGVEDGMFFGLALDYENEDEKTIARLQ
AWVDQLLSELAAHPEGIVRRDVSGTHLIHP"
misc_feature complement(408417..408932)
/locus_tag="Caur_0320"
/note="flavodoxin FldA; Validated; Region: PRK09267"
/db_xref="CDD:181740"
gene 409856..410476
/locus_tag="Caur_0321"
/db_xref="GeneID:5827664"
CDS 409856..410476
/locus_tag="Caur_0321"
/note="KEGG: bcl:ABC0821 restriction endonuclease R XbaI"
/codon_start=1
/transl_table=11
/product="restriction endonuclease R XbaI"
/protein_id="YP_001633961.1"
/db_xref="GI:163845917"
/db_xref="REBASE:CauJORF322P"
/db_xref="GeneID:5827664"
/translation="MESVTDKIRSLASKYAQELQHKIETRTKELESDDQSHYLIYKVL
GIQDDEGRLIDLYQNKGRFLYKYAGAFLEEATFLCFKERFPHARRAQVENTSGQRPRQ
FHIDCLIDREAIEIKWRDATTDGDHIIKEHARIKVIKDHGFYPVRVMFFYPNREQAKR
IQETIKTVYQGIGGACYTGDDAWEYVRTRTGIDLKVILVNIAKDLQ"
misc_feature 409862..410428
/locus_tag="Caur_0321"
/note="ApaLI-like restriction endonuclease; Region:
RE_ApaLI; pfam09499"
/db_xref="CDD:118036"
gene 410488..411690
/locus_tag="Caur_0322"
/db_xref="GeneID:5827665"
CDS 410488..411690
/locus_tag="Caur_0322"
/note="PFAM: DNA methylase N-4/N-6 domain protein;
KEGG: bcl:ABC0822 adenine-specific DNA methylase"
/codon_start=1
/transl_table=11
/product="DNA methylase N-4/N-6 domain-containing protein"
/protein_id="YP_001633962.1"
/db_xref="GI:163845918"
/db_xref="InterPro:IPR001091"
/db_xref="InterPro:IPR002052"
/db_xref="InterPro:IPR002295"
/db_xref="InterPro:IPR002941"
/db_xref="GeneID:5827665"
/translation="MTVLCGDCRIVLQSINDSSIDLVYMDPPFFTQKTHALVNRDGNA
SYSFEDTWESIETYLAFMREVLIQCKRVLKDTGSIFVHCDRSASHHLRVLLDQIFGPE
HFQSEIIWTYRRWSNSKKGLLPAHQTIYFYSKTENFKFNVLFTDYSPTTNIDQILQAR
ARNEKGKSVYRRDQHGNIVAGKEKKGVPLSDVWYIPFLNPKAKERVGYPTQKPVLLLE
RIIKIATDSGDSVLDPFCGSGTTLVAAKLLGRTYIGIDISREAVSLSEERLRQPIKSE
SQLLVVGEEGFRMKSNYERNLLKALDAVPVERNSGIDGFLFIDEQPIPVRIQKDDEDI
ATARQKLKAASRAKQCSSMILIRTKTENNLCLFETEDDDVLVIDAYDLIIRSWLHKRK
YRKKTTVS"
misc_feature 410491..411294
/locus_tag="Caur_0322"
/note="DNA modification methylase [DNA replication,
recombination, and repair]; Region: COG0863"
/db_xref="CDD:31203"
misc_feature 411178..>411300
/locus_tag="Caur_0322"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(411187..411207,411253..411258)
/locus_tag="Caur_0322"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(412364..413473)
/locus_tag="Caur_0323"
/db_xref="GeneID:5827666"
CDS complement(412364..413473)
/locus_tag="Caur_0323"
/note="PFAM: ABC transporter related; Transport-associated
OB domain protein;
SMART: AAA ATPase;
KEGG: hma:rrnAC0908 spermidine/putrescine ABC transporter
ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter-like protein"
/protein_id="YP_001633963.1"
/db_xref="GI:163845919"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013611"
/db_xref="GeneID:5827666"
/translation="MNFSAEPALQLQNVTRRYGKVVAVNNVSLAAAQGECLVIVGPSG
CGKTTLLRLIAGLDVQDEGSIKIQNRIVSGKGVFVPPEKRRVGLVFQDYALFPHMTIA
RNVAFGLHGRSKADVQRRVYEMLEMVHLAHMADRYPHELSGGERQRVALARALAPQPD
ILLLDEPFSSLDAGLRTAMREQLQSLLKEINITTFFVTHDQEEALLLGNRVAVVNQGR
IEQIGTPEQVFHQPATHFVAEFFGYTVFISGRATADGLETELGFLPQRLSLDSGAEVN
ILVRPDDLTVYPDETGQAYIARTGFQGMHCMYQIALPSGRTIYSLMPHTRIYAPGTRV
RVELHPGHDLVCFRNGRAVTDVGRGEGVEEIENRR"
misc_feature complement(412439..413464)
/locus_tag="Caur_0323"
/note="ABC-type spermidine/putrescine transport systems,
ATPase components [Amino acid transport and metabolism];
Region: PotA; COG3842"
/db_xref="CDD:33633"
misc_feature complement(412805..413449)
/locus_tag="Caur_0323"
/note="ABC Carbohydrate and Solute Transporters-like
subgroup. This family is comprised of proteins involved
in the transport of apparently unrelated solutes and
proteins specific for di- and oligosaccharides and
polyols. ABC transporters are a large family...; Region:
ABC_Carb_Solutes_like; cd03259"
/db_xref="CDD:73018"
misc_feature complement(413330..413353)
/locus_tag="Caur_0323"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73018"
misc_feature complement(order(412877..412879,412976..412981,
413201..413203,413327..413335,413339..413344))
/locus_tag="Caur_0323"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73018"
misc_feature complement(413201..413212)
/locus_tag="Caur_0323"
/note="Q-loop/lid; other site"
/db_xref="CDD:73018"
misc_feature complement(413024..413053)
/locus_tag="Caur_0323"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73018"
misc_feature complement(412976..412993)
/locus_tag="Caur_0323"
/note="Walker B; other site"
/db_xref="CDD:73018"
misc_feature complement(412958..412969)
/locus_tag="Caur_0323"
/note="D-loop; other site"
/db_xref="CDD:73018"
misc_feature complement(412871..412891)
/locus_tag="Caur_0323"
/note="H-loop/switch region; other site"
/db_xref="CDD:73018"
misc_feature complement(412448..412645)
/locus_tag="Caur_0323"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:203932"
gene complement(413496..415220)
/locus_tag="Caur_0324"
/db_xref="GeneID:5827667"
CDS complement(413496..415220)
/locus_tag="Caur_0324"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: hha:Hhal_1189 binding-protein-dependent transport
systems inner membrane component"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport system inner
membrane protein"
/protein_id="YP_001633964.1"
/db_xref="GI:163845920"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:5827667"
/translation="MRSMIVPLTRRYWNVMLIKRQQLAGNWSLPDRWSIIAFLIAGLA
LLPIAIILRMLVQPAPDVWQHLWATRLAEFLSNTVVLLIRVGLGTTLLGTALAWLVTA
YRFPGQRLFDWALMLPMAVPSYVLAFVFMATFDYAGPVQKALRAWFGSSAWFPSIRSG
GGAIFVMTLTLYPYVYLLARAAFHEHGRGTFEVARTLGVTRLQAFLRVVLPMARPSLV
AGLSLVLMEVLTDVGTVRFLNFPTLSDGIFRIWHGMMDRDAALQSAAVLLLFAFGALL
IERYTRGRARYVQEGSRGHGLAQVPLTGWRALAATLVCSFVLATAFLLPVSQLIQWSV
HELWHRMPEGLLAIYWRHVRATLILAGAGAVISVLAAVLLAYGTHLSRSPVTRLAARG
ATLGYAIPGAVIGLGVLLPLSWLDHTLNDVTYQWWGVLPGLIFTGSITGLIYAYVVRF
MAVAHSSVEASLEKISPGIEAAARTLGARPIRVLWHVHLPLIRAGMLTGAALVFVDVM
KELPITLLLRPFGYETLALWIWQNVAESLWSEAALPALTIVVADLLVVGILIRSATLR
GRHSIERT"
misc_feature complement(413514..415040)
/locus_tag="Caur_0324"
/note="ABC-type Fe3+ transport system, permease component
[Inorganic ion transport and metabolism]; Region: ThiP;
COG1178"
/db_xref="CDD:31371"
misc_feature complement(414468..414914)
/locus_tag="Caur_0324"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(414477..414482,414510..414515,
414522..414533,414552..414554,414561..414566,
414606..414608,414657..414659,414666..414671,
414681..414683,414687..414692,414699..414701,
414708..414713,414828..414830,414834..414839,
414846..414875,414879..414890))
/locus_tag="Caur_0324"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(414516..414533,414828..414872))
/locus_tag="Caur_0324"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(414477..414479,414486..414488,
414513..414515,414726..414728,414828..414830))
/locus_tag="Caur_0324"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(414585..414587,414597..414602,
414618..414656))
/locus_tag="Caur_0324"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
misc_feature complement(413562..414083)
/locus_tag="Caur_0324"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(413562..413567,413574..413579,
413586..413591,413595..413600,413607..413612,
413640..413645,413673..413678,413685..413696,
413715..413717,413724..413729,413769..413771,
413820..413822,413829..413834,413844..413846,
413850..413855,413862..413864,413868..413870,
413889..413894,413994..413996,414000..414005,
414012..414041,414045..414056))
/locus_tag="Caur_0324"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(413679..413696,413994..414038))
/locus_tag="Caur_0324"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(413610..413612,413640..413642,
413649..413651,413676..413678,413907..413909,
413994..413996))
/locus_tag="Caur_0324"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(413748..413750,413760..413765,
413781..413819))
/locus_tag="Caur_0324"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(415261..416391)
/locus_tag="Caur_0325"
/db_xref="GeneID:5827668"
CDS complement(415261..416391)
/locus_tag="Caur_0325"
/note="PFAM: extracellular solute-binding protein family
1;
KEGG: nmu:Nmul_A0732 extracellular solute-binding protein,
family 1"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein"
/protein_id="YP_001633965.1"
/db_xref="GI:163845921"
/db_xref="InterPro:IPR006059"
/db_xref="InterPro:IPR011587"
/db_xref="GeneID:5827668"
/translation="MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVV
VTQEVPVRETVVVRETVEVPVEEPIVYVYSARHYGQMETAFAEFTKETGIEVRFTFGS
DAELRERLKAEGRFTPADVLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSN
QWYALSLRVRTIAYHPDRVNPEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIV
HHGYDKAKEIVTGWAQNAKEYIDSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYP
VKLLWANQAEQGVHVNASGAGVTTYARHPENAIRLLEWLSTERGQRLFADSNFEYPAN
PNVAPHELIQQWGDFKRDTLQISEIGSLQADAIKLMNEAGYQ"
sig_peptide complement(416296..416391)
/locus_tag="Caur_0325"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.310 at
residue 32"
misc_feature complement(415342..416145)
/locus_tag="Caur_0325"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_8; pfam13416"
/db_xref="CDD:205594"
misc_feature complement(415264..416139)
/locus_tag="Caur_0325"
/note="ABC-type Fe3+ transport system, periplasmic
component [Inorganic ion transport and metabolism];
Region: AfuA; COG1840"
/db_xref="CDD:32025"
gene complement(416608..417420)
/locus_tag="Caur_0326"
/db_xref="GeneID:5827669"
CDS complement(416608..417420)
/locus_tag="Caur_0326"
/note="KEGG: rrs:RoseRS_4462 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633966.1"
/db_xref="GI:163845922"
/db_xref="GeneID:5827669"
/translation="MQQHNSAATTKPAPVRLRPIALPIEHGGWSMVGAPIALGLWLAP
SPAGFWLSLAALGAFLGRQPLKLAISDYRRGKRYPRTVWAERFVLGYGAITLIAVGMA
WWYAAFSFWPPIILAVPFAVVQLFFDLRKQSRALLAELAGAIAISALAAVIVMAAGWT
LWSALGLWLLLSLQAVTAIVYVRIRLRLARNEPAHRAPALILHLAALVTVAGLLSIGW
VSWPVLLVFALLFMRCWIGLSPRSLATPTPLVGVQEVIVALLVVVGIRFGLS"
misc_feature complement(417019..417357)
/locus_tag="Caur_0326"
/note="YwiC-like protein; Region: YwiC; pfam14256"
/db_xref="CDD:206424"
gene complement(417462..417782)
/locus_tag="Caur_0327"
/db_xref="GeneID:5827670"
CDS complement(417462..417782)
/locus_tag="Caur_0327"
/note="PFAM: Cupin 2 conserved barrel domain protein;
KEGG: rca:Rcas_0816 cupin 2 conserved barrel domain
protein"
/codon_start=1
/transl_table=11
/product="cupin"
/protein_id="YP_001633967.1"
/db_xref="GI:163845923"
/db_xref="InterPro:IPR013096"
/db_xref="GeneID:5827670"
/translation="MNPATVRHVLEQISIPDDSTISRTIYQDDQIKAVLFGFAAGQEL
SEHTAATPAIMHFVQGEARVTLGQEVVEAKPGTWVHMPAHLPHSIQAHTPVIMLLLLL
RGTR"
misc_feature complement(417477..>417704)
/locus_tag="Caur_0327"
/note="Uncharacterized conserved protein, contains
double-stranded beta-helix domain [Function unknown];
Region: COG1917"
/db_xref="CDD:32101"
gene 419279..420406
/locus_tag="Caur_0328"
/db_xref="GeneID:5827671"
CDS 419279..420406
/locus_tag="Caur_0328"
/note="PFAM: pyruvate carboxyltransferase;
KEGG: afw:Anae109_2393 homocitrate synthase"
/codon_start=1
/transl_table=11
/product="pyruvate carboxyltransferase"
/protein_id="YP_001633968.1"
/db_xref="GI:163845924"
/db_xref="InterPro:IPR000891"
/db_xref="InterPro:IPR002034"
/db_xref="GeneID:5827671"
/translation="MSLPERLFFVDTTLREGEQFASARFTTAQRIAIAEMLDAFGVEY
IELTSPAASPQSARDLATIARRGLRARILTHIRCHMADARLAVEHGAQGANLLFATSE
PLRTVSHGRSLSEILAEAKRVICYLRDHDIEVRFSCEDSFRTDLADLIRIYRAVETMG
VQRVGLADTVGIATPRQVYDVVRAVRNEVQCDIEFHGHNDSGCAIANTFSAYEAGATH
LDVTVLGIGERNGIASLSGMIARIASIDPSRVQRYRLDLLPKIDETVATMLGIEIPFN
QCITSPTAFHHKAGMHTKAVLSDPRSYEVLDPNLFGRQRTIAIAHRLVGWHAVAERAR
ELGITLSEAQARAAAARIKALGDEHDLDGAMIDEILYSYAE"
misc_feature 419297..420079
/locus_tag="Caur_0328"
/note="Saccharomyces cerevisiae homocitrate synthase and
related proteins, catalytic TIM barrel domain; Region:
DRE_TIM_HCS; cd07948"
/db_xref="CDD:163685"
misc_feature 419306..420340
/locus_tag="Caur_0328"
/note="homocitrate synthase; Region: LysS_fung_arch;
TIGR02146"
/db_xref="CDD:162728"
misc_feature order(419321..419326,419333..419335,419414..419416,
419501..419503,419507..419509,419693..419695,
419777..419779,419864..419866,419870..419872)
/locus_tag="Caur_0328"
/note="active site"
/db_xref="CDD:163685"
misc_feature order(419321..419326,419414..419416)
/locus_tag="Caur_0328"
/note="catalytic residues [active]"
/db_xref="CDD:163685"
misc_feature order(419324..419326,419777..419779,419864..419866,
419870..419872)
/locus_tag="Caur_0328"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163685"
gene 420422..421678
/locus_tag="Caur_0329"
/db_xref="GeneID:5827672"
CDS 420422..421678
/locus_tag="Caur_0329"
/EC_number="4.2.1.33"
/note="catalyzes the isomerization between
2-isopropylmalate and 3-isopropylmalate in leucine
biosynthesis"
/codon_start=1
/transl_table=11
/product="3-isopropylmalate dehydratase large subunit"
/protein_id="YP_001633969.1"
/db_xref="GI:163845925"
/db_xref="InterPro:IPR001030"
/db_xref="InterPro:IPR006251"
/db_xref="InterPro:IPR011826"
/db_xref="GeneID:5827672"
/translation="MPTMSEQILSRVAGRTVRAGDVVTANVDLVMVHDSLAPGIIRIL
HQELGAERVWDPQRVAVVIDHVAPAASVQTAEKQQEVRRWVRAQGIPHLFDVGRGISH
PVLVEEGLAQPGMLILGSDSHSTAYGCVGAFGTGMGSTDIALALATGKTWLRVPETIV
VRARGRFGFGVGPKDLALRAARLLRADGATYAAIEWHGVEFLSVMERMTLATLSIEMG
AKAGIVPPTGLNVTGPLLPTVTADAGYQEVVEIDLDQLEPQVSAPHYVDNVANLSDLG
RVAVDVVYLGTCTNGHYEDMAVAAQILAGRRLAPGVRMIVVPASAQALQRAAADGTLA
TLLAAGATIGTPGCGACIGRHMGVLAPGEVCLFTGNRNFRGRMGSPEAQIYLASPAVA
AATALTGYLTDPRTVMDGQPAIASRN"
misc_feature 420422..421645
/locus_tag="Caur_0329"
/note="3-isopropylmalate dehydratase large subunit;
Reviewed; Region: PRK00402"
/db_xref="CDD:179006"
misc_feature 420428..421636
/locus_tag="Caur_0329"
/note="Aconitase catalytic domain; Aconitase catalyzes the
reversible isomerization of citrate and isocitrate as part
of the TCA cycle; Region: Aconitase; cl00285"
/db_xref="CDD:199278"
misc_feature order(420518..420520,420527..420529,420782..420787,
421475..421477,421532..421534,421547..421549)
/locus_tag="Caur_0329"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:153129"
misc_feature order(420788..420790,421283..421285,421463..421465,
421472..421477,421529..421531)
/locus_tag="Caur_0329"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:153129"
gene 421701..422201
/gene="leuD"
/locus_tag="Caur_0330"
/db_xref="GeneID:5827943"
CDS 421701..422201
/gene="leuD"
/locus_tag="Caur_0330"
/note="catalyzes the isomerization between
2-isopropylmalate and 3-isopropylmalate in leucine
biosynthesis"
/codon_start=1
/transl_table=11
/product="3-isopropylmalate dehydratase small subunit"
/protein_id="YP_001633970.1"
/db_xref="GI:163845926"
/db_xref="InterPro:IPR000573"
/db_xref="InterPro:IPR011827"
/db_xref="GeneID:5827943"
/translation="MARVWLFGPDINTDQIVPGRYAPYMLKDESELRRYPFIEHRPDF
AANVRPGDIIVAGKNFGCGSSREYAPLALRMVGIGAIIAPLFARIFFRNALNLGIPCF
TADLTGELADGDEVELDLEQGRITTADGRVIHLPPPPLFLREVWAAGGIVPFYRTYGR
FPGEVA"
misc_feature 421716..422060
/gene="leuD"
/locus_tag="Caur_0330"
/note="Aconatase-like swivel domain of 3-isopropylmalate
dehydratase and related uncharacterized proteins.
3-isopropylmalate dehydratase catalyzes the isomerization
between 2-isopropylmalate and 3-isopropylmalate, via the
formation of 2-isopropylmaleate...; Region: IPMI_Swivel;
cd01577"
/db_xref="CDD:73275"
misc_feature 421890..421898
/gene="leuD"
/locus_tag="Caur_0330"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73275"
gene 422201..423199
/locus_tag="Caur_0331"
/db_xref="GeneID:5827944"
CDS 422201..423199
/locus_tag="Caur_0331"
/EC_number="1.1.1.85"
/note="PFAM: isocitrate/isopropylmalate dehydrogenase;
KEGG: rrs:RoseRS_1057 3-isopropylmalate dehydrogenase"
/codon_start=1
/transl_table=11
/product="3-isopropylmalate dehydrogenase"
/protein_id="YP_001633971.1"
/db_xref="GI:163845927"
/db_xref="InterPro:IPR001804"
/db_xref="GeneID:5827944"
/translation="MQICVIPGDGIGPEVIAVATAALRVLAPDLTIKEAEAGWAVFQR
TGTALPETTLALAREATAILFGAVASPSHPVPGYRSPIVELRRTLDLYANIRPTVGNE
VDLVVVRENTEDLYIGRERLEDDGATAIAERVITRAASARIVRTACELARTRQAYGHP
GKVTIVHKANVLRVSDGLFRTVALEVAADYPELTFEERLVDVAAMQLAAQPQRFDVIV
TTNMFGDILSDIACIHGGGLGVAASSNLGHGRALFEPVHGAAPDIAGRGIANPTAALN
CVVMLLDWIGRPHAAERLRSAITAVAAAGIRTPDVGGQATTREVADEILNQLSAQM"
misc_feature 422201..423184
/locus_tag="Caur_0331"
/note="Isocitrate/isopropylmalate dehydrogenase [Amino
acid transport and metabolism]; Region: LeuB; COG0473"
/db_xref="CDD:30821"
misc_feature 422207..423184
/locus_tag="Caur_0331"
/note="tartrate dehydrogenase; Provisional; Region:
PRK08194"
/db_xref="CDD:181281"
gene 423214..423381
/locus_tag="Caur_0332"
/db_xref="GeneID:5827945"
CDS 423214..423381
/locus_tag="Caur_0332"
/note="TIGRFAM: lysine biosynthesis protein LysW;
KEGG: rca:Rcas_3470 lysine biosynthesis protein LysW"
/codon_start=1
/transl_table=11
/product="lysine biosynthesis protein LysW"
/protein_id="YP_001633972.1"
/db_xref="GI:163845928"
/db_xref="InterPro:IPR005906"
/db_xref="GeneID:5827945"
/translation="MHAECPECVAQITLPASTLESEIVACPDCGAELEVVSLNPPTLA
LAPEVEEDWGE"
misc_feature 423214..423378
/locus_tag="Caur_0332"
/note="lysine biosynthesis protein LysW; Region: lysW;
TIGR01206"
/db_xref="CDD:188119"
gene 423425..423592
/locus_tag="Caur_0333"
/db_xref="GeneID:5827946"
CDS 423425..423592
/locus_tag="Caur_0333"
/note="TIGRFAM: lysine biosynthesis protein LysW;
KEGG: rca:Rcas_3470 lysine biosynthesis protein LysW"
/codon_start=1
/transl_table=11
/product="lysine biosynthesis protein LysW"
/protein_id="YP_001633973.1"
/db_xref="GI:163845929"
/db_xref="InterPro:IPR005906"
/db_xref="GeneID:5827946"
/translation="MQAECPECGATIALPAGTMANEIVACPDCGAELEVVNLDPPTLA
LAPEVEEDWGE"
misc_feature 423425..423589
/locus_tag="Caur_0333"
/note="lysine biosynthesis protein LysW; Region: lysW;
TIGR01206"
/db_xref="CDD:188119"
gene 423655..424503
/locus_tag="Caur_0334"
/db_xref="GeneID:5827947"
CDS 423655..424503
/locus_tag="Caur_0334"
/note="TIGRFAM: alpha-L-glutamate ligase, RimK family;
lysine biosynthesis enzyme LysX;
PFAM: ATP-dependent carboxylate-amine ligase domain
protein ATP-grasp; protein of unknown function DUF201;
RimK domain protein ATP-grasp;
KEGG: rca:Rcas_3469 lysine biosynthesis enzyme LysX"
/codon_start=1
/transl_table=11
/product="lysine biosynthesis protein LysX"
/protein_id="YP_001633974.1"
/db_xref="GI:163845930"
/db_xref="InterPro:IPR003135"
/db_xref="InterPro:IPR003806"
/db_xref="InterPro:IPR004666"
/db_xref="InterPro:IPR011761"
/db_xref="InterPro:IPR011870"
/db_xref="InterPro:IPR013651"
/db_xref="GeneID:5827947"
/translation="MRIAVLCSRIRAEEKLLFQELERRGLDYVKVDDREQIFDLHTTT
YPFDVVLERCIQHSRALYMLKIFNDAGVPTVNTYHVALTCGDKFLTTQALIHAGVPTP
RCLLAFTPESALEAMEQLGYPVVLKPVIGSWGRMVSKINDRDAAEAILEHRDVLGNYQ
HSIFYIQQYIHKPGRDIRSFVIGDECIAAIYRTSPHWITNTARGGVATNCPVTPELAD
ISVRAAHAVGGGVVAIDLLETPEGELLVNEVNYTMEFRNSIDTTGVDIPARIIDYVLE
VGRGRG"
misc_feature 423661..424491
/locus_tag="Caur_0334"
/note="Lysine biosynthesis enzyme LysX; Region: LysX_arch;
TIGR02144"
/db_xref="CDD:131199"
misc_feature 423907..424476
/locus_tag="Caur_0334"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl03087"
/db_xref="CDD:207834"
gene 424633..425667
/locus_tag="Caur_0335"
/db_xref="GeneID:5827948"
CDS 424633..425667
/locus_tag="Caur_0335"
/EC_number="1.2.1.38"
/note="KEGG: rrs:RoseRS_1060
N-acetyl-gamma-glutamyl-phosphate reductase;
TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase;
PFAM: Semialdehyde dehydrogenase NAD - binding;
Semialdehyde dehydrogenase dimerisation region"
/codon_start=1
/transl_table=11
/product="N-acetyl-gamma-glutamyl-phosphate reductase"
/protein_id="YP_001633975.1"
/db_xref="GI:163845931"
/db_xref="InterPro:IPR000534"
/db_xref="InterPro:IPR000706"
/db_xref="InterPro:IPR012280"
/db_xref="GeneID:5827948"
/translation="MSLRVSIVGASGYVGGELLRLLLDHPHVSIIQATSARNAGRYLY
QVHPNLRGRTNLQFVHPDTLQPCDVLFLALPHGEAAQAIERYASLAERIIDCSADFRL
RDPAVYQQWYGSAHPAPAWLERFVYGLPEVNRAALTGARYASGVGCNATATNLALLPL
VEANLIDRSRPIIADVKVGSSEGGATVNEASHHPERSGAVRSFAPVGHRHLAEVEQVT
GLRNVHLSITAIELVRGALATVHAFASRELSEKELWQAYRTFAREQPFIRIVKERQGI
YRYPEPKILAGTNYADIGFAYEPATGRIVSICAIDNLMKGAAGSAVQCMNLMCGFAET
TALTFAGLHP"
misc_feature 424633..425664
/locus_tag="Caur_0335"
/note="N-acetyl-gamma-glutamyl-phosphate reductase;
Validated; Region: argC; PRK00436"
/db_xref="CDD:179024"
misc_feature 424642..425052
/locus_tag="Caur_0335"
/note="Semialdehyde dehydrogenase, NAD binding domain;
Region: Semialdhyde_dh; smart00859"
/db_xref="CDD:197927"
misc_feature 425107..425577
/locus_tag="Caur_0335"
/note="Glyceraldehyde 3-phosphate dehydrogenase,
C-terminal domain; Region: Gp_dh_C; cl15856"
/db_xref="CDD:210256"
gene complement(425782..426054)
/locus_tag="Caur_0336"
/db_xref="GeneID:5827949"
CDS complement(425782..426054)
/locus_tag="Caur_0336"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633976.1"
/db_xref="GI:163845932"
/db_xref="GeneID:5827949"
/translation="MEGYVRQRIEVLTARLNSLRPGLERARQSVARLENEAVPAGATA
LARAAQLSAARAMATTLAERERHLLIAIQALQAELADQTLTGHEQE"
gene complement(427180..428205)
/locus_tag="Caur_0337"
/db_xref="GeneID:5827950"
CDS complement(427180..428205)
/locus_tag="Caur_0337"
/note="PFAM: band 7 protein;
KEGG: rrs:RoseRS_3855 band 7 protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633977.1"
/db_xref="GI:163845933"
/db_xref="InterPro:IPR001107"
/db_xref="GeneID:5827950"
/translation="MSQRAPVRGSMTSRLSLVGGFILLLIIVGIGLSTMKYVQVDEGQ
AAIELVQGRIVAVHGPGPIFRPFAPFTEIELVNIRRQSRQISQNVASSDKQLYDIDIQ
VDFRRLPTEQALRAAYAEIGVSDAQLNDFLDGFINDALKSASTQFTLDEALSDRGAFA
ERIRRFLTTPPGDGQRAPVDQLYITIEAVKVLDIKVGETYAQLLAEKANLEVQIETEQ
KRRQQIEAQQANNLFQAEQEALVALTRERGITAAALEAANREAQVRAIEGRYWRENPE
LFELRKRELLVQMMANGNIWFVDPNTNLTLLLNNQAGEGQALVIPQPGAGQSVTPPAP
TEPSVSP"
misc_feature complement(427528..428094)
/locus_tag="Caur_0337"
/note="SPFH domain / Band 7 family; Region: Band_7;
pfam01145"
/db_xref="CDD:201624"
gene complement(428220..429239)
/locus_tag="Caur_0338"
/db_xref="GeneID:5827951"
CDS complement(428220..429239)
/locus_tag="Caur_0338"
/note="PFAM: glycosyl transferase family 2;
KEGG: rca:Rcas_1513 ribonuclease III"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_001633978.1"
/db_xref="GI:163845934"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:5827951"
/translation="MVKQQPTFSVVAPVYNEEQLIAEFCRRVIAALEPLGEPFELVLV
NDGCRDRSPEIMRELHQRDPRIKVINFSRNFGHQIAITAGTDYATGKAVIVIDSDLQD
PPEVIPELIARWREGYQVVYGVREEREGETWFKKTTAAIFYRLIVRITNVNIPVDTGD
FRLMDRKVVDALKRMREHHRFMRGLSAWIGFRQTGVPYRRHARAAGTTKYPLRKMLRF
ALDGITSFSYLPLQLATYLGFIVAAISMIFLLVVFVMRLADPSAPEPAFYGQASTLAS
VLFLGAVQLISLGIIGEYVGRIYDEVKGRPLYIVAEALGVEEEPATSPASVRTTHMEQ
STSVK"
misc_feature complement(428274..429215)
/locus_tag="Caur_0338"
/note="undecaprenyl phosphate
4-deoxy-4-formamido-L-arabinose transferase; Provisional;
Region: PRK10714"
/db_xref="CDD:182669"
misc_feature complement(428667..429212)
/locus_tag="Caur_0338"
/note="Bacterial DPM1_like enzymes are related to
eukaryotic DPM1; Region: DPM1_like_bac; cd04187"
/db_xref="CDD:133030"
misc_feature complement(order(428943..428945,429195..429197,
429201..429203))
/locus_tag="Caur_0338"
/note="Ligand binding site; other site"
/db_xref="CDD:133030"
misc_feature complement(order(428943..428948,429102..429104))
/locus_tag="Caur_0338"
/note="Putative Catalytic site; other site"
/db_xref="CDD:133030"
misc_feature complement(428943..428951)
/locus_tag="Caur_0338"
/note="DXD motif; other site"
/db_xref="CDD:133030"
gene 429574..431100
/locus_tag="Caur_0339"
/db_xref="GeneID:5827952"
CDS 429574..431100
/locus_tag="Caur_0339"
/note="PFAM: DNA mismatch repair protein MutS domain
protein;
KEGG: ace:Acel_0734 DNA mismatch repair protein MutS
domain protein"
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein MutS
domain-containing protein"
/protein_id="YP_001633979.1"
/db_xref="GI:163845935"
/db_xref="InterPro:IPR000432"
/db_xref="GeneID:5827952"
/translation="MVSLSILHYHDGLQTEATSQPDFFPDLNLDQVVEAITKPGQEYN
LQPFFWTPLRDAQAVRYRQEVFQDLEKAPILEAIKQFAEGMRVVRRYLAMMEQLNFAD
HRKGWLLEAALVYCDTVTTLARHLVDLPLRSNGLSTFREHLTTCIQSPAFRSLATDSQ
HVKNALAAIKYSVIIESGKFSVKRYEGEVDYSSEVEHVFSKFKQRDAQDYLVHLPERA
GMSHIEAKILEFVARLYPEPFEELDRFCTEHNQFLDETIRTFDREIQFYVAYLEYIAD
LKRQGLPFCYPHVSATSKAVYVRDGFDLALAHAWRYEQKTITLNDFFLTGPERILVVT
GPNQGGKTTFARMFGQLHYLASLGCPVPGREAGLFLADRIFTHFERIEDSQNLRGKLE
DDLVRMHRALIQATPDSIFILNEIFSSTTVQDALFLSKEIMARLTDLDVLGVWVTFLD
ELASLSEKMVSMVASVDPNDPVRRTFQIIRKPADGLAYALSLARKHGLSREQLQERIR
"
misc_feature 430462..431067
/locus_tag="Caur_0339"
/note="The MutS protein initiates DNA mismatch repair by
recognizing mispaired and unpaired bases embedded in
duplex DNA and activating endo- and exonucleases to remove
the mismatch. Members of the MutS family also possess a
conserved ATPase activity that...; Region:
ABC_MutS_homologs; cd03243"
/db_xref="CDD:73002"
misc_feature 430576..430599
/locus_tag="Caur_0339"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73002"
misc_feature order(430585..430590,430594..430602,430708..430710,
430813..430818,430915..430917)
/locus_tag="Caur_0339"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73002"
misc_feature 430699..430710
/locus_tag="Caur_0339"
/note="Q-loop/lid; other site"
/db_xref="CDD:73002"
misc_feature 430723..430764
/locus_tag="Caur_0339"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73002"
misc_feature 430801..430818
/locus_tag="Caur_0339"
/note="Walker B; other site"
/db_xref="CDD:73002"
misc_feature 430825..430836
/locus_tag="Caur_0339"
/note="D-loop; other site"
/db_xref="CDD:73002"
misc_feature 430903..430923
/locus_tag="Caur_0339"
/note="H-loop/switch region; other site"
/db_xref="CDD:73002"
gene 431097..432614
/locus_tag="Caur_0340"
/db_xref="GeneID:5827953"
CDS 431097..432614
/locus_tag="Caur_0340"
/note="PFAM: DNA mismatch repair protein MutS domain
protein;
KEGG: tpt:Tpet_1786 DNA mismatch repair protein MutS
domain protein"
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein MutS
domain-containing protein"
/protein_id="YP_001633980.1"
/db_xref="GI:163845936"
/db_xref="InterPro:IPR000432"
/db_xref="GeneID:5827953"
/translation="MMKVFLLHPDQDFDPSTPLLPNVDDLTQDLSLNILFKAMARGDT
FLFQVVRQVVLSPLDESASILYRQEILKDCLKYPDVVRQMYLIPLTFLERKHKRWLWI
SLRHSTPTSILSSARELLAASLDLLRQLRLIADQHVNTFESQGFRRFFTMIQRELDDD
YLNLVEKHVQQLRFSRGTLLSAQPGKGNEGSNYVLCYPNDADQHWLQRMLTSHSPTYS
YTLHPRDEAGARILEELRDRGLARAANAVGQAAEHIESFFRVLQWELAFYIGCLNLYE
QLTALGKPVTFPQPVPAHERRLSCAELYDVTLALTLGSSVVGNDISADGKSLIIVTGP
NRGGKTVFLRSVGVAQLMMQCGMFVPAESFLANLTTGLFTHFKREEDKTMERGKFEEE
LARMSVIVDYLTPNALLLLNESFSATNEREGSEIARQIVSTLIEKGIKVYFVTHLYEF
TRSFNGDNILFLRAERLPDGERTFRLKEADPLKTSYSVDLYYRIFGTEQQQEMTD"
misc_feature 432012..432584
/locus_tag="Caur_0340"
/note="The MutS protein initiates DNA mismatch repair by
recognizing mispaired and unpaired bases embedded in
duplex DNA and activating endo- and exonucleases to remove
the mismatch. Members of the MutS family also possess a
conserved ATPase activity that...; Region:
ABC_MutS_homologs; cd03243"
/db_xref="CDD:73002"
misc_feature 432093..432116
/locus_tag="Caur_0340"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73002"
misc_feature order(432102..432107,432111..432119,432225..432227,
432330..432335,432432..432434)
/locus_tag="Caur_0340"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73002"
misc_feature 432216..432227
/locus_tag="Caur_0340"
/note="Q-loop/lid; other site"
/db_xref="CDD:73002"
misc_feature 432240..432281
/locus_tag="Caur_0340"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73002"
misc_feature 432318..432335
/locus_tag="Caur_0340"
/note="Walker B; other site"
/db_xref="CDD:73002"
misc_feature 432342..432353
/locus_tag="Caur_0340"
/note="D-loop; other site"
/db_xref="CDD:73002"
misc_feature 432420..432440
/locus_tag="Caur_0340"
/note="H-loop/switch region; other site"
/db_xref="CDD:73002"
gene complement(433144..435972)
/locus_tag="Caur_0341"
/db_xref="GeneID:5827954"
CDS complement(433144..435972)
/locus_tag="Caur_0341"
/EC_number="2.7.7.7"
/note="KEGG: rrs:RoseRS_3415 DNA polymerase I;
TIGRFAM: DNA polymerase I;
PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease;
3'-5' exonuclease;
SMART: Helix-hairpin-helix domain protein class 2"
/codon_start=1
/transl_table=11
/product="DNA polymerase I"
/protein_id="YP_001633981.1"
/db_xref="GI:163845937"
/db_xref="InterPro:IPR001098"
/db_xref="InterPro:IPR002298"
/db_xref="InterPro:IPR002421"
/db_xref="InterPro:IPR002562"
/db_xref="InterPro:IPR008918"
/db_xref="GeneID:5827954"
/translation="MAYPLLVLVDGHALAYRAFFALRESGLRSSRGEPTYAVFGFAQI
LLTALAEYRPDYAAVAFDVGRTFRDDLYAEYKAGRAETPEEFYPQFERIKQLVQALNI
PIYTAEGYEADDVIGTLARQATERGVDTIILTGDSDVLQLVNDHVRVALANPYGGKTS
VTLYDLEQVRKRYDGLEPDQLADLRGLKGDTSDNIPGVRGIGEKGAIALLKQFRSLDA
LLEQIDAAPKRYQTLLREQAEAARFSRQLATIVTDVPVQLDLEAARIGVYDRSAVMAL
FQELEFGVSSNLIKKLPSVVQAPTLAELPADLPAAPLTTAPTQLSLFAGESEPAQPTA
EPPPVTIVRDATALADLVSRLRNAPAFAFDTECTSLQPVASDLVGISIAIAPDTVCYI
PVGHQSETQVPCGEVVTALAPFFANPQQPKFAHNAKFDMEVLAGAGIKVSGLAFDTMI
AAAMLGKRQGLKDLAFYELKLPEPPTTIEDLIGRGNKQISFAEVPVEQAAPYAAADAL
YTLRLTERLQRQLEAEPALHDLYYRVELPLIEVLTDMELTGIRLDQEYLRELGRHFAQ
RIADLVERIYQQAGGPFNINSGQQLNDVLFGRLGIDPRAHGLSKLKSGGYSITAEVLE
ELSQLYPIAADILTYRQLTKLKSTYIDALPDLVNPRTGRIHTSYNQLGAATGRLSSNN
PNLQNIPVRTEEGREIRRAFVAEPGWRFVAADYSQIELRVLAHMSGDENLIAAFQQGL
DIHAATASRLFGVEPTAVDKNQRRVAKTVVFGVIYGISAFGLAQRLGIERDLARQLID
NLFAQFPGIRRYIDQTLEFGRQHGYVQTLFGRRRVMEDLRASGARRAAAEREAINAPI
QGTAADLMKMAMVNVHRALREQGLRTRLLLQVHDELIAEAPEDEVEPAARLLRDVMSS
VYRDLVVPLSVNLEVGPNWDEMSPLAMG"
misc_feature complement(433165..435963)
/locus_tag="Caur_0341"
/note="DNA polymerase I; Provisional; Region: PRK05755"
/db_xref="CDD:180237"
misc_feature complement(435460..435957)
/locus_tag="Caur_0341"
/note="PIN domain of the 5'-3' exonuclease of Taq DNA
polymerase I and homologs; Region: PIN_53EXO; cd09859"
/db_xref="CDD:189029"
misc_feature complement(order(435559..435561,435565..435567,
435631..435636,435640..435642,435787..435789,
435943..435945))
/locus_tag="Caur_0341"
/note="active site"
/db_xref="CDD:189029"
misc_feature complement(order(435565..435567,435634..435636,
435943..435945))
/locus_tag="Caur_0341"
/note="metal binding site 1 [ion binding]; metal-binding
site"
/db_xref="CDD:189029"
misc_feature complement(435736..435774)
/locus_tag="Caur_0341"
/note="putative 5' ssDNA interaction site; other site"
/db_xref="CDD:189029"
misc_feature complement(order(435631..435633,435640..435642))
/locus_tag="Caur_0341"
/note="metal binding site 3; metal-binding site"
/db_xref="CDD:189029"
misc_feature complement(order(435559..435561,435565..435567))
/locus_tag="Caur_0341"
/note="metal binding site 2 [ion binding]; metal-binding
site"
/db_xref="CDD:189029"
misc_feature complement(435223..435441)
/locus_tag="Caur_0341"
/note="H3TH domain of the 5'-3' exonuclease of Taq DNA
polymerase I and homologs; Region: H3TH_53EXO; cd09898"
/db_xref="CDD:188618"
misc_feature complement(order(435340..435351,435355..435384,
435388..435411))
/locus_tag="Caur_0341"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:188618"
misc_feature complement(order(435394..435396,435403..435405))
/locus_tag="Caur_0341"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:188618"
misc_feature complement(434341..434913)
/locus_tag="Caur_0341"
/note="DEDDy 3'-5' exonuclease domain of Escherichia coli
DNA polymerase I and similar bacterial family-A DNA
polymerases; Region: DNA_polA_I_Ecoli_like_exo; cd06139"
/db_xref="CDD:176651"
misc_feature complement(order(434455..434457,434467..434469,
434536..434541,434590..434595,434683..434691,
434695..434700,434863..434865,434872..434883))
/locus_tag="Caur_0341"
/note="active site"
/db_xref="CDD:176651"
misc_feature complement(order(434455..434457,434467..434469,
434683..434685,434875..434877,434881..434883))
/locus_tag="Caur_0341"
/note="catalytic site [active]"
/db_xref="CDD:176651"
misc_feature complement(order(434455..434457,434467..434469,
434536..434541,434590..434595,434686..434691,
434695..434700,434863..434865,434872..434880))
/locus_tag="Caur_0341"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176651"
misc_feature complement(433171..434316)
/locus_tag="Caur_0341"
/note="Polymerase I functions primarily to fill DNA gaps
that arise during DNA repair, recombination and
replication; Region: DNA_pol_A_pol_I_C; cd08637"
/db_xref="CDD:176474"
misc_feature complement(order(433303..433311,433402..433404,
433423..433425,433672..433674,433684..433686,
433744..433746,433828..433833,433927..433938,
433942..433944,433948..433956,434029..434034,
434041..434043,434053..434055))
/locus_tag="Caur_0341"
/note="active site"
/db_xref="CDD:176474"
misc_feature complement(order(433303..433311,433402..433404,
433414..433416,433423..433428,433648..433650,
433927..433938,433942..433944,433948..433956,
434029..434034,434041..434043,434053..434055))
/locus_tag="Caur_0341"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:176474"
misc_feature complement(order(433303..433305,433672..433674,
433684..433686,433744..433746,433822..433824,
433828..433833))
/locus_tag="Caur_0341"
/note="catalytic site [active]"
/db_xref="CDD:176474"
gene 436119..437177
/locus_tag="Caur_0342"
/db_xref="GeneID:5827955"
CDS 436119..437177
/locus_tag="Caur_0342"
/note="PFAM: histone deacetylase superfamily;
KEGG: rrs:RoseRS_3190 histone deacetylase superfamily"
/codon_start=1
/transl_table=11
/product="histone deacetylase superfamily protein"
/protein_id="YP_001633982.1"
/db_xref="GI:163845938"
/db_xref="InterPro:IPR000286"
/db_xref="GeneID:5827955"
/translation="MTTAIVTDQRFDLHTWHGHVEQAERLHAIRRAIEVDGLWPRLLQ
LPIRPATEAELLAVHSSSMLHRVRQLASYGGGQIDSDTYVTAESWDVALLAAGATICM
AEALVSGRCHNAFALVRPPGHHATDIRSMGFCLFNNIAVAARVLLDRHHLRRIAIVDF
DVHHGNGTQDIFYRDGRVLFCSIHAAPLYPGTGSLHEMGDPRTAGGTTLNVPLPYGTG
DHGYEQVFQRVIGPVLRRFQPEIILVSAGFDAHWSDPIGPMALSIQGFARIVQHLCDW
ADELCDGRIGFVLEGGYSLPALAAGVVTTLRLLLGMPAGSDPMGKMNAPEPAIEHIIT
SLYTYHPLLMQTTYQGEA"
misc_feature 436119..437132
/locus_tag="Caur_0342"
/note="Deacetylases, including yeast histone deacetylase
and acetoin utilization protein [Chromatin structure and
dynamics / Secondary metabolites biosynthesis, transport,
and catabolism]; Region: AcuC; COG0123"
/db_xref="CDD:30472"
misc_feature 436173..437048
/locus_tag="Caur_0342"
/note="Histone deacetylases and histone-like deacetylases,
classII; Region: HDAC_classII; cd09992"
/db_xref="CDD:212518"
misc_feature order(436485..436490,436512..436517,436599..436601,
436605..436607,436863..436865,436989..436991)
/locus_tag="Caur_0342"
/note="active site"
/db_xref="CDD:212518"
misc_feature order(436599..436601,436605..436607,436863..436865)
/locus_tag="Caur_0342"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:212518"
gene 437174..437812
/gene="hisH"
/locus_tag="Caur_0343"
/db_xref="GeneID:5827956"
CDS 437174..437812
/gene="hisH"
/locus_tag="Caur_0343"
/note="with HisF IGPS catalyzes the conversion of
phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide
ribonucleotide phosphate and glutamine to
imidazole-glycerol phosphate,
5-aminoimidazol-4-carboxamide ribonucleotide, and
glutamate in histidine biosynthesis; the HisH subunit
provides the glutamine amidotransferase activity that
produces the ammonia necessary to HisF for the synthesis
of imidazole-glycerol phosphate and
5-aminoimidazol-4-carboxamide ribonucleotide"
/codon_start=1
/transl_table=11
/product="imidazole glycerol phosphate synthase subunit
HisH"
/protein_id="YP_001633983.1"
/db_xref="GI:163845939"
/db_xref="InterPro:IPR000991"
/db_xref="InterPro:IPR010139"
/db_xref="InterPro:IPR011698"
/db_xref="InterPro:IPR011702"
/db_xref="InterPro:IPR012998"
/db_xref="GeneID:5827956"
/translation="MIAVINYGAGNLPNVVRALQRVGATLTVTDNPEVIRSAQAVVLP
GVGATADTMASLRHLGIAEVLPAVIAASTPFLGICVGMQVLLSESEEFGLHSCLDIIP
GTVRRLPEHAGKIPQIGWNQLQISPTFRNHPLFADIPDGADVYFVHSYYCAVADEAII
AARTDYGIPFPSVIIRDHLAAVQFHPEKSGDYGLRLLANFVRWSEAVQPKGV"
misc_feature 437174..437791
/gene="hisH"
/locus_tag="Caur_0343"
/note="imidazole glycerol phosphate synthase subunit HisH;
Provisional; Region: hisH; PRK13141"
/db_xref="CDD:183868"
misc_feature 437177..437776
/gene="hisH"
/locus_tag="Caur_0343"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in imidazole glycerol phosphate synthase (IGPS);
Region: GATase1_IGP_Synthase; cd01748"
/db_xref="CDD:153219"
misc_feature order(437291..437314,437402..437416,437726..437728,
437732..437734)
/gene="hisH"
/locus_tag="Caur_0343"
/note="putative active site [active]"
/db_xref="CDD:153219"
misc_feature 437291..437314
/gene="hisH"
/locus_tag="Caur_0343"
/note="oxyanion strand; other site"
/db_xref="CDD:153219"
misc_feature order(437408..437410,437726..437728,437732..437734)
/gene="hisH"
/locus_tag="Caur_0343"
/note="catalytic triad [active]"
/db_xref="CDD:153219"
gene 437815..438540
/locus_tag="Caur_0344"
/db_xref="GeneID:5827957"
CDS 437815..438540
/locus_tag="Caur_0344"
/note="catalyzes the formation of
5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-
(5-phosphoribosyl)imidazole-4-carboxamide from
1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide"
/codon_start=1
/transl_table=11
/product="1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase"
/protein_id="YP_001633984.1"
/db_xref="GI:163845940"
/db_xref="InterPro:IPR006062"
/db_xref="InterPro:IPR006063"
/db_xref="GeneID:5827957"
/translation="MEIIPAIDIKDGRCVRLYQGDFAQMTVYADDPVAVARSWEAQGA
TRLHLVDLDGARAGHPQNVDAILAITQAVQIPVQLGGGLRREQDVESALALGVERVII
GTAAIAETDLVARLLDRFGEQIVIGIDARNGLVATDGWTVTSSVKATVLAEQMANLGA
RRIIYTDISRDGALSGPNFAALSELITPHGPAIIASGGIASIDHVRQLAQLGVEGAII
GKALYVGAVKLAEAMAVAHMTNV"
misc_feature 437818..438516
/locus_tag="Caur_0344"
/note="HisA. Phosphoribosylformimino-5-aminoimidazole
carboxamide ribonucleotide (ProFAR) isomerase catalyzes
the fourth step in histidine biosynthesis, an
isomerisation of the aminoaldose moiety of ProFAR to the
aminoketose of PRFAR (N-(5'-phospho-D-1...; Region: HisA;
cd04732"
/db_xref="CDD:73394"
misc_feature 437821..438507
/locus_tag="Caur_0344"
/note="phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase; Region: TIGR00007"
/db_xref="CDD:161661"
misc_feature order(437836..437838,437956..437958,438199..438201)
/locus_tag="Caur_0344"
/note="catalytic residues [active]"
/db_xref="CDD:73394"
gene 438609..439706
/locus_tag="Caur_0345"
/db_xref="GeneID:5825745"
CDS 438609..439706
/locus_tag="Caur_0345"
/note="KEGG: rca:Rcas_2921 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633985.1"
/db_xref="GI:163845941"
/db_xref="GeneID:5825745"
/translation="MSNSDLTARYEEERLRAQEQSQLVYLQGQIDELRRLLKDQTNKY
QWAMEQIRKNEGTIAQIQSLFDRHTGEVAQANEIVRRDVVALRREVATALVKIEDGLR
PIRDMQAQIQQVAEARKQDRDFLAGWLSRIEQVERQIATLSSQVKELDERQRQLTLQL
ERLREADAAVMQEVRRFGDDLQVEKQSMRRMAVEAQQFVADLQPVVEEQRSRIDRLEE
IRQHIDLFTEMLPAQIKELSAKIPDLMAEMKRIERISTERFLMNQERLEELRQMADER
MSTLQETDEQYLRQMTAWLERIDSWLRELEQRLSRTTDRLELEQKAHLLRIMELERRE
ADTLNAQLNLLRQRLELVRAAQIESGGGNAG"
misc_feature <438654..439556
/locus_tag="Caur_0345"
/note="chromosome segregation protein SMC, common
bacterial type; Region: SMC_prok_B; TIGR02168"
/db_xref="CDD:162739"
gene complement(440235..441263)
/locus_tag="Caur_0346"
/db_xref="GeneID:5825746"
CDS complement(440235..441263)
/locus_tag="Caur_0346"
/note="PFAM: putative RNA methylase; Methyltransferase
type 11;
KEGG: rrs:RoseRS_2276 putative RNA methylase"
/codon_start=1
/transl_table=11
/product="putative RNA methylase"
/protein_id="YP_001633986.1"
/db_xref="GI:163845942"
/db_xref="InterPro:IPR000241"
/db_xref="InterPro:IPR013216"
/db_xref="GeneID:5825746"
/translation="MSHQIEIVVPAGLEELARAEALRITGLRLEPLTERGVIRATMHG
SLQALFDLRSVISVFVVRRFAIPRPRALLGDEHFRAVVAMLEMVRRLHPAGTFQTLFL
SAAGADSSVLQRFKQMIGERLGLAIGTEDGDMLIRLRPSRDRSGWDVLVRLTPRPLAT
RSWRVCNREGALNGPVAHAMAVLSKPHAGDRVLNVGCGSGTLLIERLLITTAAQAIGC
DTDPTALACAWRNLGAAGLSKRVELYDWDACQLPLPSASIDVVLADLPFGHLVGSHTT
NLTLYPALLAEAARVTRPGGRAVLISHEVRLMERSLATLPQWRVDQQLRVDLGGLYPR
IFVLRRTG"
misc_feature complement(440244..441041)
/locus_tag="Caur_0346"
/note="Predicted N6-adenine-specific DNA methylase [DNA
replication, recombination, and repair]; Region: COG0116"
/db_xref="CDD:30465"
misc_feature complement(440349..440693)
/locus_tag="Caur_0346"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(440472..440474,440520..440528,
440604..440609,440661..440681))
/locus_tag="Caur_0346"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 441394..442665
/locus_tag="Caur_0347"
/db_xref="GeneID:5825747"
CDS 441394..442665
/locus_tag="Caur_0347"
/note="KEGG: rca:Rcas_0035 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001633987.1"
/db_xref="GI:163845943"
/db_xref="GeneID:5825747"
/translation="MDIGITIWPPMPAQPQALPASWSSYDHGALREFLQRAHDVGLRQ
VRFDLRWAEVQPGTQRISVAALNGFQRGLDLAQANHIQVVVSLMSATLGPTLHLPDWA
LGIPTQALSTQAVSALLSAPTLTILDNSFYRQEPVRDLYTDPDMRAAQRYLLREVIGN
FADHPAISGWLLAAGFERVRPPTDHRDMAAWWADLAEQARSYGAERLFGHIDATALSS
RVSLRPYDIAMAGGAVVVSVGPWPPLGDGPPARGEAACFLHAIVAGLLAEEVNDTAAA
QVVVADLGWPTAPRANLSGWQADQVFAQPAHTFLADEEAAASALQESLTTLARAGAAA
VWLAGMVDPPESQWNIPPFDRSWIARTWGLWTADGREKAGWEALREAIRQLPATARLP
GFPIDPERFWRDPANELRRLWREYRTETLPS"
gene complement(442830..443591)
/gene="trmD"
/locus_tag="Caur_0348"
/db_xref="GeneID:5825748"
CDS complement(442830..443591)
/gene="trmD"
/locus_tag="Caur_0348"
/EC_number="2.1.1.31"
/note="methylates guanosine-37 in various tRNAs; uses
S-adenosyl-L-methionine to transfer methyl group to tRNA"
/codon_start=1
/transl_table=11
/product="tRNA (guanine-N(1)-)-methyltransferase"
/protein_id="YP_001633988.1"
/db_xref="GI:163845944"
/db_xref="InterPro:IPR002649"
/db_xref="GeneID:5825748"
/translation="MRFDILTLFPAMFQGPLTESILKRAQQAGRIEIHLHDIRQWTTD
RHRTADDTPYGGGAGMVMKAEPLAAAIRAVRAADERPGVTILLTPDGELLTQQIVREL
ATLPRLLLVCGHYEGIDERVRETLIDRELSIGDYVLTGGELAAMVVVDAVARLVPGVI
DSESIVEESHSDFLLEYPHYTRPAVWEGRAVPPVLLSGHHGEIARWRRAERLRRTLVR
RPDLLARAAAAGVLTKADLALLAELGWRPETSNGA"
misc_feature complement(442857..443591)
/gene="trmD"
/locus_tag="Caur_0348"
/note="tRNA (guanine-N(1)-)-methyltransferase; Reviewed;
Region: trmD; PRK00026"
/db_xref="CDD:178803"
gene complement(443597..444508)
/locus_tag="Caur_0349"
/db_xref="GeneID:5825749"
CDS complement(443597..444508)
/locus_tag="Caur_0349"
/note="PFAM: alpha/beta hydrolase fold;
KEGG: rxy:Rxyl_2331 hypothetical protein"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold-containing protein"
/protein_id="YP_001633989.1"
/db_xref="GI:163845945"
/db_xref="InterPro:IPR000073"
/db_xref="GeneID:5825749"
/translation="MAVKPGWSLLPMALAGAFSLLGGITAYYVSLRVSPSPRRTYLDS
YTFTPWELEVPYETVEFRSSDGLRLVGWWLPRPETNAVIVGSHGHAGRKDELLGIGSY
CWRAGYNVLLFDYRGRGESDPWPQTLVSREVDDLLAALQYVRQRMPEAAIGVIGYSMG
AAVGILATARDQSVRALVADSSFTTGDEVVADAVEKVLRVPLRPLVHLADIIVAWRHG
YRFSQARPIDAIGQIAPRPVFLIHGVDDSLVPVCHVRQLYAAAREPRLVWEIPGAEHC
GGYFVDRVGYCRRVVEFFDQYLRSVEA"
sig_peptide complement(444440..444508)
/locus_tag="Caur_0349"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.907) with cleavage site probability 0.865 at
residue 23"
misc_feature complement(443681..444265)
/locus_tag="Caur_0349"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_5;
pfam12695"
/db_xref="CDD:205024"
misc_feature complement(443615..444208)
/locus_tag="Caur_0349"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene complement(444518..445105)
/locus_tag="Caur_0350"
/db_xref="GeneID:5825750"
CDS complement(444518..445105)
/locus_tag="Caur_0350"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: rca:Rcas_2087 GCN5-related N-acetyltransferase"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_001633990.1"
/db_xref="GI:163845946"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:5825750"
/translation="MNDQPVCQDIPTTITTRDGRTLRVRSLAASDAVLLERMFYRLSP
ETIYRRFFIAAEHASPELVHKSAKRLAAINPRREAALVALADEQGSEEAIAVARFARL
PHNPKVAEASILVRDDYQGTGVGRKLLALLLAEARAAGLERLIFLTHADNTPMIRLAM
GLGLPFQGRHADGLYEIHVLLEPQSTTKFEFVRNE"
misc_feature complement(444617..444835)
/locus_tag="Caur_0350"
/note="N-Acyltransferase superfamily: Various enyzmes that
characteristicly catalyze the transfer of an acyl group to
a substrate; Region: NAT_SF; cl00357"
/db_xref="CDD:213096"
gene 445343..446233
/gene="miaA"
/locus_tag="Caur_0351"
/db_xref="GeneID:5825751"
CDS 445343..446233
/gene="miaA"
/locus_tag="Caur_0351"
/EC_number="2.5.1.75"
/note="IPP transferase; isopentenyltransferase; involved
in tRNA modification; in Escherichia coli this enzyme
catalyzes the addition of a delta2-isopentenyl group from
dimethylallyl diphosphate to the N6-nitrogen of adenosine
adjacent to the anticodon of tRNA species that read codons
starting with uracil; further tRNA modifications may
occur; mutations in miaA result in defects in translation
efficiency and fidelity"
/codon_start=1
/transl_table=11
/product="tRNA delta(2)-isopentenylpyrophosphate
transferase"
/protein_id="YP_001633991.1"
/db_xref="GI:163845947"
/db_xref="InterPro:IPR002627"
/db_xref="InterPro:IPR011593"
/db_xref="GeneID:5825751"
/translation="MEELIAIVGPTAVGKTELAVAWARRINGEIVSADSRQIYRWMDI
GTAKPSPEEQAQAPHHLIDIRDPDQPFSLAEFCDLATAAIADIRGRGRIPLLVGGTGQ
YLAAFLEGWQVPRVAPQPDLRAELELIAAREGPAVLHARLAAVDPVAASRIPPTNVRR
VVRALEVYLVSGEPISRLQERKEPPFRPRTIWLHRPRAELYARADARIERMIAAGLVE
EVAGLLARGYDWSLPAMSSLGYIQFRPYFTGEADLPTCIERLRFDTHAFIRRQEMWFR
RLPNLEIWTPDHPSWREITA"
misc_feature 445343..446212
/gene="miaA"
/locus_tag="Caur_0351"
/note="tRNA delta(2)-isopentenylpyrophosphate transferase;
Reviewed; Region: miaA; PRK00091"
/db_xref="CDD:178856"
misc_feature 445352..446170
/gene="miaA"
/locus_tag="Caur_0351"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
gene complement(446203..447006)
/locus_tag="Caur_0352"
/db_xref="GeneID:5825752"
CDS complement(446203..447006)
/locus_tag="Caur_0352"
/note="PFAM: RDD domain containing protein;
KEGG: rca:Rcas_3447 RDD domain containing protein"
/codon_start=1
/transl_table=11
/product="RDD domain-containing protein"
/protein_id="YP_001633992.1"
/db_xref="GI:163845948"
/db_xref="InterPro:IPR010432"
/db_xref="GeneID:5825752"
/translation="MNATPSWREPYLVVTPEGVQVVYTAAGLASRSLAAVVDYVIIIT
LLATSLVMIAANEGTSSANQDVILALLAILAFVVNWGYFVFFEWIWNGQTPGKRLLRL
RVLREGGRPVDIGAIVVRNLMRAIDFLPLLYGIGLVTMFVDRYHRRLGDLTAGTVVVH
EAMPLTLERVMQPVVVQLPPRAPDAPPTPLVPNVERLTAADLALLLEFLQRRDELQTE
ARSDLAAHLAAVLRQRLALPSGSGDPERFIEHVLREYHVAQAVISRQDG"
misc_feature complement(446542..446931)
/locus_tag="Caur_0352"
/note="RDD family; Region: RDD; pfam06271"
/db_xref="CDD:203419"
gene complement(447003..447680)
/locus_tag="Caur_0353"
/db_xref="GeneID:5825753"
CDS complement(447003..447680)
/locus_tag="Caur_0353"
/note="PFAM: Phosphoglycerate mutase;
KEGG: rca:Rcas_3445 phosphoglycerate mutase"
/codon_start=1
/transl_table=11
/product="phosphoglycerate mutase"
/protein_id="YP_001633993.1"
/db_xref="GI:163845949"
/db_xref="InterPro:IPR001345"
/db_xref="InterPro:IPR003094"
/db_xref="InterPro:IPR013078"
/db_xref="GeneID:5825753"
/translation="MTIVYLIRHGETDWNMQGRWQGHADVPLNEIGYQQARLLARRLA
NEGVTFSAIYSSDLARAYQTAWEIGAALRVPVQLLPALREIDVGAWSGLTTAEVRARF
ADDWEQMIRGHDIPRGGGETVAAVRQRVVTAVEAMVAQHRGQTLAFVTHGGCIRVLLA
HAENFDGVGFGHYDHIGNTSITILEIGYKHWRVKTVNDMRHLEAEHKTELVSAPPDDA
ELPDTAQ"
misc_feature complement(447123..447671)
/locus_tag="Caur_0353"
/note="Histidine phosphatase domain found in
phosphoglycerate mutases and related proteins, mostly
phosphatases; contains a His residue which is
phosphorylated during the reaction; Region: HP_PGM_like;
cd07067"
/db_xref="CDD:132718"
misc_feature complement(order(447225..447230,447501..447503,
447654..447659))
/locus_tag="Caur_0353"
/note="catalytic core [active]"
/db_xref="CDD:132718"
gene 448020..449645
/locus_tag="Caur_0354"
/db_xref="GeneID:5825754"
CDS 448020..449645
/locus_tag="Caur_0354"
/note="PFAM: thymidylate synthase complementing protein
ThyX;
KEGG: rrs:RoseRS_0926 thymidylate synthase complementing
protein ThyX"
/codon_start=1
/transl_table=11
/product="thymidylate synthase complementing protein ThyX"
/protein_id="YP_001633994.1"
/db_xref="GI:163845950"
/db_xref="InterPro:IPR003669"
/db_xref="GeneID:5825754"
/translation="METQQPETFTEQEIELLQPFVTNVDRPIFCLRNLPEVVKGALFA
RYSRSSKSLRRLLLDEFINEPESGFSAMVSAQDHNPAAQLIATRQAEAFYDRVLIGYG
DDSVAELGGAHLACEGVSNIAAKLLEDSRLGISPLEKSTRYVRFDRKGPDGYPYLREP
AIMASPLADRYVAVMDHLFTTYSELLEPVQAWLQQQYPRDEATTPRAYRNTIQAKALD
LLRGLLPMATQTNVGLFGNGRAFEYLIIKLAASPFAEAQALSKMIQAELDQVIPSFVK
RARSDRGQAYADYLATTREQVAALAHQIPVEADSTTPVTVTLVDYDPRAEWKLAAAIL
YPHLDLPLPAIEELVAAMPEAERHALINAAVGDRANRFHRPGRAFEEPYYTFDILADI
GAYRDLQRHRVLTQERQRFTVRHGYVTPPELEEIGVADRYRTALEQAADLVTALEATL
PNEAQYAVPLAFRVRWRIKLNLREAYHLIELRSARQGHPSYRQIAQLMFREISAVHPF
LAAGMRFVDHNEYDLERLAAEQRIDQKRQQVGR"
misc_feature 448278..448871
/locus_tag="Caur_0354"
/note="Thymidylate synthase complementing protein; Region:
Thy1; cl03630"
/db_xref="CDD:207983"
misc_feature 448965..449546
/locus_tag="Caur_0354"
/note="Thymidylate synthase complementing protein; Region:
Thy1; pfam02511"
/db_xref="CDD:202265"
gene complement(449712..449786)
/locus_tag="Caur_R0004"
/note="tRNA-Lys2"
/db_xref="GeneID:5825755"
tRNA complement(449712..449786)
/locus_tag="Caur_R0004"
/product="tRNA-Lys"
/db_xref="GeneID:5825755"
gene complement(449835..450569)
/locus_tag="Caur_0355"
/db_xref="GeneID:5825756"
CDS complement(449835..450569)
/locus_tag="Caur_0355"
/note="PFAM: LmbE family protein;
KEGG: rca:Rcas_1525 LmbE family protein"
/codon_start=1
/transl_table=11
/product="LmbE family protein"
/protein_id="YP_001633995.1"
/db_xref="GI:163845951"
/db_xref="InterPro:IPR003737"
/db_xref="GeneID:5825756"
/translation="MQQTQSEPKTALVVVAHPDDAEFGCGGTLAAWAAEGWEITLVVC
TDGSGGGPDDATDVGPAARRRISEIRKAEQQAAAKILGLKEVIFLDYPDGMLQPTLEL
RRDIVRQIRRIRAQRVVCQSPDRVWTPQYSIPRFHPDHLAAANATLAAVYPAAQNGWD
FPELLAEGYPPSKVREVYITGAPVLNFAVDISATIEQKLAALRCHVSQLGTDQTELAG
RVRQWAAERGQEFGLPLAEAFHRVEN"
misc_feature complement(449853..450569)
/locus_tag="Caur_0355"
/note="Uncharacterized proteins, LmbE homologs [Function
unknown]; Region: COG2120"
/db_xref="CDD:32303"
gene complement(450699..451310)
/locus_tag="Caur_0356"
/db_xref="GeneID:5825757"
CDS complement(450699..451310)
/locus_tag="Caur_0356"
/note="PFAM: ferredoxin;
KEGG: cte:CT0652 chlorosome envelope protein X"
/codon_start=1
/transl_table=11
/product="ferredoxin"
/protein_id="YP_001633996.1"
/db_xref="GI:163845952"
/db_xref="InterPro:IPR001041"
/db_xref="GeneID:5825757"
/translation="MATVIVNDVEMTARPGERILDIARRNSAHIGFVCDGTGFCQTCK
VRVLAGAEFLSPPNDREKNWLPDARLQEGWRLGCQASVRGKGPIAVITNAEELRLQAF
AAINPPAGSSVATNVSSLITNLTQQSIDQLVGYPWNMLNAIATIGLGRIINPWQSMER
FSQWLTDIGKVVEQTLNSPAPAPPSDPLARVRAAAAEVRRASE"
misc_feature complement(451059..451292)
/locus_tag="Caur_0356"
/note="2Fe-2S iron-sulfur cluster binding domain.
Iron-sulfur proteins play an important role in electron
transfer processes and in various enzymatic reactions. The
family includes plant and algal ferredoxins, which act as
electron carriers in photosynthesis...; Region: fer2;
cd00207"
/db_xref="CDD:29262"
misc_feature complement(order(451077..451082,451182..451193,
451197..451199,451209..451211,451218..451223))
/locus_tag="Caur_0356"
/note="catalytic loop [active]"
/db_xref="CDD:29262"
misc_feature complement(order(451077..451079,451182..451184,
451191..451193,451209..451211))
/locus_tag="Caur_0356"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:29262"
gene 451481..452401
/locus_tag="Caur_0357"
/db_xref="GeneID:5825758"
CDS 451481..452401
/locus_tag="Caur_0357"
/note="PFAM: phospholipid/glycerol acyltransferase;
KEGG: rxy:Rxyl_2580 phospholipid/glycerol acyltransferase"
/codon_start=1
/transl_table=11
/product="phospholipid/glycerol acyltransferase"
/protein_id="YP_001633997.1"
/db_xref="GI:163845953"
/db_xref="InterPro:IPR002123"
/db_xref="GeneID:5825758"
/translation="MVSSTTQRTDVVRVEQYTASGESLSSALADLTWLNTADMLRGFG
ISKPPWLYGLSTVLARPPALRFARQLLTFDALVGQAGLPAGCAWICSLFAPGLDIVGP
QPPAQGPLLIVANHPGLLDAAALITALNRNDLKIIAIARPLLRTLPNTAAAIIPIGTT
PQHRMNALRTALRHLQQGGAVLTFPAGRIEPDPAHDDTASASLEDWSSSLDLFGRIAG
GVPVVTAIVSNVLAEAALHHPLTLLHRNPEDRRWLAAILQVLWPHLATTPVRIQFSAP
CRADHQMRATVLHTARQSIYQARAAQRRTP"
misc_feature 451793..>452164
/locus_tag="Caur_0357"
/note="N-Acyltransferase superfamily: Various enyzmes that
characteristicly catalyze the transfer of an acyl group to
a substrate; Region: NAT_SF; cl00357"
/db_xref="CDD:213096"
misc_feature order(451826..451828,451832..451834,451841..451843,
451892..451894,451901..451909,452039..452047)
/locus_tag="Caur_0357"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153244"
gene 452398..453608
/locus_tag="Caur_0358"
/pseudo
/db_xref="GeneID:5824748"
gene 453611..454219
/locus_tag="Caur_0359"
/db_xref="GeneID:5824749"
CDS 453611..454219
/locus_tag="Caur_0359"
/EC_number="3.5.4.25"
/note="PFAM: GTP cyclohydrolase II;
KEGG: bce:BC4111 GTP cyclohydrolase II"
/codon_start=1
/transl_table=11
/product="GTP cyclohydrolase II"
/protein_id="YP_001633998.1"
/db_xref="GI:163845954"
/db_xref="InterPro:IPR000926"
/db_xref="GeneID:5824749"
/translation="MTTFFPITRAAMADLPTRFGHFQIVVYLDAEQKEQIALTCGQLH
TPEPVLTRLHSECLTGDIFGSHRCDCGEQLAAALTAIQQAGRGVLLYLRQEGRGIGLV
NKIRAYALQQQGLDTVDANRALGLPDDMRDYRVAAAILTDLGIKSVRLLTNNPAKITG
IEQHGIAVTERVPLQMPANNYSAAYLLAKQVRMGHLLDSRLL"
misc_feature 453629..454201
/locus_tag="Caur_0359"
/note="GTP cyclohydrolase II (RibA). GTP cyclohydrolase
II catalyzes the conversion of GTP to
2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'
phosphate, formate, pyrophosphate (APy), and GMP in the
biosynthetic pathway of riboflavin. Riboflavin is the...;
Region: GTP_cyclohydro2; cd00641"
/db_xref="CDD:88311"
misc_feature 453629..454201
/locus_tag="Caur_0359"
/note="GTP cyclohydrolase II [Coenzyme metabolism];
Region: RibA; COG0807"
/db_xref="CDD:31150"
misc_feature order(453638..453658,453680..453682,453686..453694,
453710..453712,453716..453718,453722..453724,
453776..453778,453782..453787,453791..453805,
453809..453811,453830..453835,453842..453844,
453881..453883,453887..453889,453911..453916,
453923..453928,453932..453937,453944..453946)
/locus_tag="Caur_0359"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:88311"
misc_feature order(453764..453781,453785..453787,453812..453814,
453818..453820,453827..453829,453890..453901,
453920..453922,453932..453934,453941..453943,
453959..453961,453995..453997,454001..454003,
454064..454072,454079..454081)
/locus_tag="Caur_0359"
/note="active site"
/db_xref="CDD:88311"
gene complement(454251..455486)
/locus_tag="Caur_0360"
/db_xref="GeneID:5824750"
CDS complement(454251..455486)
/locus_tag="Caur_0360"
/note="PFAM: glycoside hydrolase family 1;
KEGG: sus:Acid_2768 glycoside hydrolase, family 1"
/codon_start=1
/transl_table=11
/product="glycoside hydrolase family protein"
/protein_id="YP_001633999.1"
/db_xref="GI:163845955"
/db_xref="InterPro:IPR001360"
/db_xref="GeneID:5824750"
/translation="MQQFAFPTGFLWGAATSAHQVEGNNINSDSWVLEHLPDTIYAEP
SGDACDYYHRYPEDIALLAQLGFNAYRFSIEWARIEPEEGEFSFASLEHYRRMLATCH
EHGLKPVVTLHHFTSPRWLIRAGGWLDPKTPDRFVRYCERVVHYLGDLIAGACTFNEP
NLPVLLSKIMPASPLASPFWRAAAAEFAVTPDRLGIFQFVSQPRMREIIFAAHRRAFE
VLHDGPGSFPVGMTLALVDIHAGPDGERMAAEFRRELAEVYLEQLREDDFVGVQTYSR
LVVGPAGIIPPGDDVEKTQTGEEYYPEAIGGTIRHAAAVAGIPVVVTENGLATTDDTR
RVEYFRRALRSVAECLIDGIDVRGYFAWSALDNFEWISGYKPKLGIIAVDRTTQARTP
KPSAYWLGNVARFNYCVFD"
sig_peptide complement(455424..455486)
/locus_tag="Caur_0360"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.707) with cleavage site probability 0.625 at
residue 21"
misc_feature complement(454293..455468)
/locus_tag="Caur_0360"
/note="Glycosyl hydrolase family 1; Region: Glyco_hydro_1;
cl01046"
/db_xref="CDD:207297"
gene complement(455634..458492)
/locus_tag="Caur_0361"
/db_xref="GeneID:5824751"
CDS complement(455634..458492)
/locus_tag="Caur_0361"
/note="PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase
domain protein;
KEGG: kra:Krad_0118 alpha-L-rhamnosidase"
/codon_start=1
/transl_table=11
/product="alpha-L-rhamnosidase"
/protein_id="YP_001634000.1"
/db_xref="GI:163845956"
/db_xref="InterPro:IPR001525"
/db_xref="InterPro:IPR008902"
/db_xref="InterPro:IPR013737"
/db_xref="GeneID:5824751"
/translation="MSYEQLSTSQSQVSRLIVRVEHYQSTLGIGNPCPRLSWIIETNA
TNWLQTAYEIECYTKDGRVRGRTGWIHSPESVLVPWPFEPLTSREQVLVRVRVRDNKG
DISPWSEMLPIEAGLLKVGDWSARFITPDWDDDILKPQPCPMLRHEFRVDNDVIQARL
YITSLGVYEAQINGVVVGDQVLAPGWTVYDRRLRYQTFDVTMHLREGINAIGVILGDG
WFRGRLGFGGGRRNIYGNRLAVLAQLEITYRDGSTQQVCTDQTWRSTTGPILASDIYD
GEIYDARLELPNWSKPGFADHQWSGVRLLEWDFSTLVAPISPPIRRIEMVLPVAIFSS
PSGRTIVDFGQNLVGRVRLTVSGPPGQMITVRHAEVLEGGELSTRPLRFAAATDRYIL
RGDGTEVWEPRFTFHGFRYAEIDGWPGELRTTDIVAVVIHSDMERIGWFTCSDQLLNR
FHENVVWSMRGNFLDVPTDCPQRDERLGWTGDIQVFAPTAVFLYDVAGLLQSWLIDLA
IEQEKLGGAVPHVVPNVLGPSAAGAAAWGDAATVVPWVLFQRYGDKRVLETQYKSMRS
WVDYIATKAGHTYLWDRGFQFGDWLDPTAPPDKPGQARTDKAIVASAYFIFSATLVAK
AAHVLGYDADADFYADLAHKARFAFAKEYITPAGRLMCDTETAYALALVFDLFPTDTQ
RRYAGERLAALVRDSGYHIRTGFVGTPLICDALCSVGHCRVAYRLLMQRECPSWLYPV
TMGATTIWERWDSMLPDGSINPGEMTSFNHYALGAVADWMHRTIGGLIPVEPGYRRIE
FRPQPGGEIVYARVSHRTPYGLAECFWRIEEGVFYLRVVVPPNTTAQVFLPGRDDQPL
DVGSGIWQWSIPCQDTATRGSYTVDDLVDEIIDDEVAREAVNQVLSQVDAWRLFGNLL
LNERSASLREAIQALPNSEIVIERLNALLTRIPKKDGI"
misc_feature complement(457521..458030)
/locus_tag="Caur_0361"
/note="Alpha-L-rhamnosidase N-terminal domain; Region:
Bac_rhamnosid_N; pfam08531"
/db_xref="CDD:149548"
misc_feature complement(455949..457502)
/locus_tag="Caur_0361"
/note="Bacterial alpha-L-rhamnosidase; Region:
Bac_rhamnosid; pfam05592"
/db_xref="CDD:147646"
gene complement(458521..459387)
/locus_tag="Caur_0362"
/db_xref="GeneID:5824752"
CDS complement(458521..459387)
/locus_tag="Caur_0362"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: aau:AAur_0944 putative ABC-type sugar transport
system, permease component"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport system inner
membrane protein"
/protein_id="YP_001634001.1"
/db_xref="GI:163845957"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:5824752"
/translation="MRMLMTSTMLTLRKQSVWKLLIWTLVVILVLIELYPLTWLLLSS
FKAPAEFSLNPIYALPEGFYWQNYIRAWTEGRMGVYFRNSLMVTIPSLFLILCLGSMA
AFGIEILKWRFNNVVLVIFLLGIMIPVQMILLPLFAIYNQLQLLNTFTGLILVYTAFG
LPLTIFLLVSFAKSLPHEVLEAALIDGANIYQIFLYIALPMMANAIITVGLVQFFFIW
NDLLISLTFISDSELRTVQTGLLSFVGRFGQREWGPTFASITTSVIPILFLYLILNNA
IMKGLTSGAVKG"
misc_feature complement(458527..459273)
/locus_tag="Caur_0362"
/note="ABC-type sugar transport system, permease component
[Carbohydrate transport and metabolism]; Region: UgpE;
COG0395"
/db_xref="CDD:30744"
misc_feature complement(458587..459147)
/locus_tag="Caur_0362"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(458587..458592,458599..458604,
458611..458616,458620..458625,458632..458637,
458665..458670,458707..458709,458713..458715,
458722..458733,458752..458754,458761..458766,
458806..458808,458857..458859,458866..458871,
458881..458883,458887..458892,458899..458901,
458905..458907,458911..458916,458977..458979,
458983..458988,458995..459024,459028..459039,
459067..459069,459082..459087,459094..459099))
/locus_tag="Caur_0362"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(458716..458733,458977..459021))
/locus_tag="Caur_0362"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(458635..458637,458665..458667,
458674..458676,458713..458715,458929..458931,
458977..458979))
/locus_tag="Caur_0362"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(458785..458787,458797..458802,
458818..458856))
/locus_tag="Caur_0362"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(459399..460283)
/locus_tag="Caur_0363"
/db_xref="GeneID:5824753"
CDS complement(459399..460283)
/locus_tag="Caur_0363"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: csc:Csac_0127 binding-protein-dependent transport
systems inner membrane component"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport system inner
membrane protein"
/protein_id="YP_001634002.1"
/db_xref="GI:163845958"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:5824753"
/translation="MNQTLRDRKALLVFVGPALTLYVMIVIVPIIWTVGYSLFEGSPI
TGFQFVGLGNYGKLWQDQDFINAFLFSARYALVVTAGQVGFGLLLALLYLFFLKRSSA
FIRTLVFFPVVLPTVAVAQIFVKLFEITPQYGLVNAIFAAIGQESWVQPWLGRSDSAF
WVAALMNIWTAMGFYAVILYAGLLDIPNEIIESARLDGANGFNLVVFVIQPLLTPVLV
TSIIFSLNGTLKVFDQLLALTNGGPGKTTTPLTLYMYRVAFNYNDYGYGSTIAIILMI
ECLIVSLLAFRFARRDVS"
misc_feature complement(459411..460274)
/locus_tag="Caur_0363"
/note="ABC-type polysaccharide transport system, permease
component [Carbohydrate transport and metabolism]; Region:
LplB; COG4209"
/db_xref="CDD:33938"
misc_feature complement(<459576..459992)
/locus_tag="Caur_0363"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(459576..459578,459585..459596,
459615..459617,459624..459629,459669..459671,
459720..459722,459729..459734,459744..459746,
459750..459755,459762..459764,459768..459770,
459777..459782,459912..459914,459918..459923,
459930..459959,459963..459974))
/locus_tag="Caur_0363"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(459579..459596,459912..459956))
/locus_tag="Caur_0363"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(459576..459578,459795..459797,
459912..459914))
/locus_tag="Caur_0363"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(459648..459650,459660..459665,
459681..459719))
/locus_tag="Caur_0363"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(460430..461776)
/locus_tag="Caur_0364"
/db_xref="GeneID:5824754"
CDS complement(460430..461776)
/locus_tag="Caur_0364"
/note="PFAM: extracellular solute-binding protein family
1;
KEGG: aau:AAur_0946 putative extracellular sugar-binding
protein"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein"
/protein_id="YP_001634003.1"
/db_xref="GI:163845959"
/db_xref="InterPro:IPR006059"
/db_xref="GeneID:5824754"
/translation="MMPGKLVVPSLLVLICCVIISCSAPAAQPQPVVTPAQSTTTESQ
LPVVIHYLTVQQETEGWPLIIGTLTREYQANHPNVEWKYENYPQTDLVQRIQLLAGSD
SLPFMFNYESGAPLRDLAASGKVLELEQTFKELGIYDRLNPGAVSLLKNLVGGSGLYA
LPLELNIEGFWYNKQIFAEHNLAVPTTWDELLAVADKLHQAGIQPFAVSGLQKWPLTR
LINGYVMRVYGYDVMSRVVNGELKVTDAGFIAAAQIVQDMAMKGYFGQGVNTLDYAPA
QDLFLQGRAAMYYMGSWALRDFNNPELNKIGIDNIGFFNIPLVEGGVGTLNDYSINAG
LTTSFSQKEFSRNPQGYGEWMKAVFSAYGDRAMSELGMITGFTVSQIPDNVSPLTRLT
VAEIDNVKNGAPWFEAYFNARTQAVATDNVQLLVTGDMSPEEYMAELQKAIDEQLP"
sig_peptide complement(461693..461776)
/locus_tag="Caur_0364"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.998) with cleavage site probability 0.996 at
residue 28"
misc_feature complement(460742..461578)
/locus_tag="Caur_0364"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_8; pfam13416"
/db_xref="CDD:205594"
misc_feature complement(460694..461566)
/locus_tag="Caur_0364"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_1; pfam01547"
/db_xref="CDD:201851"
gene complement(462031..463071)
/locus_tag="Caur_0365"
/db_xref="GeneID:5824755"
CDS complement(462031..463071)
/locus_tag="Caur_0365"
/note="PFAM: regulatory protein LacI; periplasmic binding
protein/LacI transcriptional regulator;
KEGG: rso:RSc1014 probable transcriptional regulatory
DNA-binding repressor transcription regulator protein"
/codon_start=1
/transl_table=11
/product="periplasmic binding protein/LacI transcriptional
regulator"
/protein_id="YP_001634004.1"
/db_xref="GI:163845960"
/db_xref="InterPro:IPR000843"
/db_xref="InterPro:IPR001761"
/db_xref="GeneID:5824755"
/translation="MKRPTQMDVARRAGVSRATVSHVINGLSGGRVPISPETRERVWQ
AIKELGYEPDAGARALRLGKSRTIGLIMPDLYNPHFWENAEGVEQEARANGYRLLLCS
MNLNIQYGEDAFKDLVGRRIDALILMGSFVYESEEARNTLIRSLERGLPIVEISDRVT
KDYLADCVLSDYRAVAAAAMQHLIMLGHRRIGLIYGVANSSLAEDRLIPYKKSLQAVG
IPIDEQLIVHCGPTIEEGYRAAIHLLQKPNRPTAIVAINDLLAIAVLRAAGDMGLRVP
ADVSLIGFDDIAIANYLIPRLTTAAKDAVQLGREAVKLALARLRDPKRPRQVIEVPAR
LILRESTAPPSC"
misc_feature complement(462037..463062)
/locus_tag="Caur_0365"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:31797"
misc_feature complement(462889..463050)
/locus_tag="Caur_0365"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature complement(order(462889..462894,462898..462903,
462910..462912,462919..462921,462958..462960,
462967..462972,462997..462999,463006..463011,
463015..463029))
/locus_tag="Caur_0365"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature complement(462892..462921)
/locus_tag="Caur_0365"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature complement(462064..462873)
/locus_tag="Caur_0365"
/note="Ligand binding domain of the LacI tanscriptional
regulator family belonging to the type I
periplasmic-binding fold protein superfamily; Region:
PBP1_LacI_sugar_binding_like; cd06267"
/db_xref="CDD:107262"
misc_feature complement(order(462262..462267,462274..462276,
462286..462288,462370..462372,462709..462717,
462724..462726,462733..462735,462766..462768,
462772..462786,462805..462810,462814..462819,
462826..462834,462871..462873))
/locus_tag="Caur_0365"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107262"
misc_feature complement(order(462166..462168,462217..462219,
462379..462381,462454..462456,462562..462564,
462601..462603,462688..462690,462823..462825,
462832..462837))
/locus_tag="Caur_0365"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107262"
gene 463509..463772
/locus_tag="Caur_0366"
/db_xref="GeneID:5824756"
CDS 463509..463772
/locus_tag="Caur_0366"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634005.1"
/db_xref="GI:163845961"
/db_xref="GeneID:5824756"
/translation="MWSAAAWLPRQPCSRSSAWYSVDPAGHGDAGCGVPSLVGLGTLS
ACYARGAACGVRQRGCRASRAHDPARGIPLTRLVTGMPGVMFF"
gene complement(463963..464589)
/locus_tag="Caur_0367"
/db_xref="GeneID:5824757"
CDS complement(463963..464589)
/locus_tag="Caur_0367"
/note="PFAM: protein of unknown function DUF88;
KEGG: mca:MCA1614 cold-shock DNA-binding domain protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634006.1"
/db_xref="GI:163845962"
/db_xref="InterPro:IPR002790"
/db_xref="GeneID:5824757"
/translation="MNNVCRIGVFYDGSYFTYAQFYFYSEKKVGWLSFVPFHRLIEQF
VSSKEQRYAAHRVVYASWHQGLFHSAQTSEKQFQIERNRHIDLVHAGIEPKYVPMPPN
GQEKGVDVSLAIDAMERAMEGKIDVAVLVTGDGDLTPLVRALMKHGVRVGLLYFEYES
SQRTSHVNRRLLDACNYALNVNQLEHTPQAAAIFKGLFRQPQGVVARN"
misc_feature complement(464065..464571)
/locus_tag="Caur_0367"
/note="LabA_like proteins; Region: LabA_like; cd06167"
/db_xref="CDD:199895"
misc_feature complement(order(464182..464184,464188..464190,
464194..464196,464263..464265,464545..464547,
464554..464556))
/locus_tag="Caur_0367"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:199895"
gene complement(464693..465463)
/locus_tag="Caur_0368"
/db_xref="GeneID:5824758"
CDS complement(464693..465463)
/locus_tag="Caur_0368"
/note="PFAM: Xylose isomerase domain protein TIM barrel;
KEGG: rba:RB8188 probable glyoxylate-induced protein"
/codon_start=1
/transl_table=11
/product="xylose isomerase domain-containing protein"
/protein_id="YP_001634007.1"
/db_xref="GI:163845963"
/db_xref="InterPro:IPR012307"
/db_xref="GeneID:5824758"
/translation="MSALAPLRFSVCLDMIFTDRPFEQRLEHIADLGFRAYEFWTRKG
KDMNITIALQTALRLHCVAIFGSEAAPNDPDQRARFRDEVTRSAALAVDLACDNLIVH
GGITRTDLDYATQRAHLVDALHEAAETAADAGLNLLLEPRNPVDHPGSFLWSSDEGFA
IVRELGQPHVKLLFDCYHQQISEGNLTRRILANLDLIGHIHVADVPGRHEPGTGEINY
EHIFGVLREHGYSGYVGLEYTPRIDAAASLRVVRMMSQ"
misc_feature complement(464720..465448)
/locus_tag="Caur_0368"
/note="Hydroxypyruvate isomerase [Carbohydrate transport
and metabolism]; Region: Hfi; COG3622"
/db_xref="CDD:33421"
gene complement(465894..469082)
/locus_tag="Caur_0369"
/db_xref="GeneID:5824759"
CDS complement(465894..469082)
/locus_tag="Caur_0369"
/note="PFAM: peptidase S9B dipeptidylpeptidase IV domain
protein; peptidase S41; WD40 domain protein beta
Propeller;
KEGG: rrs:RoseRS_2312 peptidase S41"
/codon_start=1
/transl_table=11
/product="peptidase S41"
/protein_id="YP_001634008.1"
/db_xref="GI:163845964"
/db_xref="InterPro:IPR002469"
/db_xref="InterPro:IPR005151"
/db_xref="InterPro:IPR011659"
/db_xref="GeneID:5824759"
/translation="MSKSQALLRQPALDPDGRLLAFIAAGDVWLVSIEGGVAERLTAH
PASHYGPRFSPDGQRILFSAGRDGSGDLYVLDLAGGPPRQITFQDEQCTPEDWANDGD
AVFFTTAIEQMGSAIYRVKTSGGTPAPIYLEPYEQLGQVAVSPDGTRLAFVNIRERWW
RRGPHPFSSNEIWLGPTDPDYRALCQIAGPFGQRLVYAGKLGWPLWAPDGQGLYIVCD
SDGNENLWYLPLGEGEARQITHFRDGRLLFPAIARRNNVIVCERGDGQLWRIDPISGE
SVPVPIRVRIDSKRTPVRVERWTSGFSEVRLSPDGKKLAIVARGDVFADFADKETDRD
LRQGPAFRVTNTPAREWSIAWAPDSQRLIYLSDRYGEVELFAYDFSSGQEQQLTRDGR
PKMLPRIAPDGKSIAYIRDQRIIEVIEVTDPSPREVCQARFAVAADLCWSPDSRYLAF
IAQDDRLFSNVYIVPAAGGEPRQITFLSNLDGGNLCWSPDGSFIIFTTEQYRLEAQIA
RVDLRPSQPVFRETAFERLFEKKEEKPTEPGDQSAKEPRVSQPLTEPIIYEGIERRLR
LLTPPQMNAMAGPISPDGKDLLFLASVAGKVDVWTMPLDEPRANQPPRQLTASDTRKG
FLQFAPDGRSFYYLEDGQVVVRRFPGGNEPNRLSLRAEVEVDFHREKEQIFIEAWREL
RDSFYDPTFRGQDWQAVRDRYASLVGAVQTTGELHTLINLMVGELRASHLGSSFYNSE
SEDGFIGIIFAAEPLLREGRLIVERNLPDGPAALTADPPRPGEELVAIDGTRLNGTLS
LHKLLLRSVGRRVRLVLRANDGTEREIVVRPINASAYEQLRYRDWVFNNEQYVHTHSQ
GRLGYVHIAEMSYAAYQQFLVDLDAETHSKAGVIIDVRYNRGGHTATFILDVLMRRSA
LRSGFRDLGTTDASHLAGNRVLDRPTVLVTNERSASNTEMLSESYRRLRLGKVVGRPT
AGAVIWTYQIPLLDGSWLRLPRLYVVTPEGEDLEGRGRPVDVEAVRPLGEWAYGRDSQ
LDAAIATLLKTVRRRRKNDVPNPVASPDTTYE"
misc_feature complement(468861..468968)
/locus_tag="Caur_0369"
/note="WD40-like Beta Propeller Repeat; Region: PD40;
pfam07676"
/db_xref="CDD:203719"
misc_feature complement(467493..468776)
/locus_tag="Caur_0369"
/note="Periplasmic component of the Tol biopolymer
transport system [Intracellular trafficking and
secretion]; Region: TolB; COG0823"
/db_xref="CDD:31165"
misc_feature complement(467958..468059)
/locus_tag="Caur_0369"
/note="WD40-like Beta Propeller Repeat; Region: PD40;
pfam07676"
/db_xref="CDD:203719"
misc_feature complement(<467106..>467765)
/locus_tag="Caur_0369"
/note="Periplasmic component of the Tol biopolymer
transport system [Intracellular trafficking and
secretion]; Region: TolB; COG0823"
/db_xref="CDD:31165"
misc_feature complement(465942..467075)
/locus_tag="Caur_0369"
/note="Periplasmic protease [Cell envelope biogenesis,
outer membrane]; Region: Prc; COG0793"
/db_xref="CDD:31136"
misc_feature complement(<466875..467075)
/locus_tag="Caur_0369"
/note="C-terminal processing peptidase family S41; Region:
Peptidase_S41; cl02526"
/db_xref="CDD:207630"
misc_feature complement(465963..>466571)
/locus_tag="Caur_0369"
/note="Tricorn protease; serine protease family S41;
Region: Peptidase_S41_TRI; cd07562"
/db_xref="CDD:143478"
misc_feature complement(order(466023..466034,466059..466067,
466083..466100,466125..466127,466131..466151,
466161..466172,466209..466211,466221..466223,
466230..466235,466245..466247,466296..466304,
466308..466316,466323..466340,466359..466364,
466371..466379,466386..466391,466398..466400,
466440..466445,466452..466457,466464..466469,
466473..466475,466494..466496,466539..466541,
466548..466550,466554..466571))
/locus_tag="Caur_0369"
/note="Domain interface; other site"
/db_xref="CDD:143478"
misc_feature complement(order(466098..466100,466143..466151,
466155..466157,466230..466235,466386..466391))
/locus_tag="Caur_0369"
/note="Peptide binding site; other site"
/db_xref="CDD:143478"
misc_feature complement(order(466065..466067,466233..466235))
/locus_tag="Caur_0369"
/note="Active site tetrad [active]"
/db_xref="CDD:143478"
gene complement(469242..470030)
/locus_tag="Caur_0370"
/db_xref="GeneID:5824760"
CDS complement(469242..470030)
/locus_tag="Caur_0370"
/note="PFAM: NAD-dependent epimerase/dehydratase;
short-chain dehydrogenase/reductase SDR; Male sterility
domain; KR domain protein;
KEGG: rrs:RoseRS_1352 short-chain dehydrogenase/reductase
SDR"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_001634009.1"
/db_xref="GI:163845965"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR002424"
/db_xref="InterPro:IPR013120"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:5824760"
/translation="MDPRDRVVIITGASSGIGAATARCFAAAGARLVLAARSQEALTQ
VAADLPQALAVPTDVSDPEACMRLVERAVATYGQVDILINNAGIGLTGPVTRLARADL
ERVLAVDLLGPIWLTQAVVPIMRAGGRGQIINVSSVLAVQPLPFLGGYAAAKAALEQI
SNALRIELHGSGIAVTVVRPGTTRTDFNQRRLGRGRERRRIAPPGVPPEVVARTILRA
ARTEPRLAYVSWSDRLALWIGRLFPGLIDAILARAFVWEEQAYH"
sig_peptide complement(469950..470030)
/locus_tag="Caur_0370"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.821) with cleavage site probability 0.755 at
residue 27"
misc_feature complement(469284..469919)
/locus_tag="Caur_0370"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(order(469482..469493,469569..469571,
469581..469583,469620..469628,469770..469778,
469917..469919))
/locus_tag="Caur_0370"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(469569..469571,469581..469583,
469620..469622,469704..469706))
/locus_tag="Caur_0370"
/note="active site"
/db_xref="CDD:187535"
gene complement(470049..470990)
/locus_tag="Caur_0371"
/db_xref="GeneID:5824761"
CDS complement(470049..470990)
/locus_tag="Caur_0371"
/note="PFAM: pyruvate carboxyltransferase;
KEGG: rrs:RoseRS_4162 pyruvate carboxyltransferase"
/codon_start=1
/transl_table=11
/product="pyruvate carboxyltransferase"
/protein_id="YP_001634010.1"
/db_xref="GI:163845966"
/db_xref="InterPro:IPR000891"
/db_xref="GeneID:5824761"
/translation="MTTMTIGTLPTFVHIREVGPRDGLQNEPTILTTAQKITLIELLA
ATGLRAIEVGAFVRPQQVPQMADTEAVFAGIKRQPGVVYSAIAPNVIGARRAIAAGAD
VVQVFLSASESHNRSNVNMSIEQSLVQVAEMATLVHAAGKPFDAVLSVAFGCPFEGDV
PIERVLDLCQRLLDLGAEQLTLGDTTGMAHPLLVQEVVRAFRARFPRQPLRLHLHSAR
GAGLANLLAALQLGVDLFDSSIGGIGGCPFAPGAPGNLCTEDVTHLLHEMGIATGLNL
PALMATARELERMLGHEVPGQTIKAGICKHLRDRGEG"
misc_feature complement(470127..470948)
/locus_tag="Caur_0371"
/note="3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM
barrel domain; Region: DRE_TIM_HMGL; cd07938"
/db_xref="CDD:163676"
misc_feature complement(order(470226..470228,470346..470348,
470352..470354,470670..470672,470820..470822,
470826..470828,470916..470918,470925..470930))
/locus_tag="Caur_0371"
/note="active site"
/db_xref="CDD:163676"
misc_feature complement(order(470835..470837,470925..470930))
/locus_tag="Caur_0371"
/note="catalytic residues [active]"
/db_xref="CDD:163676"
misc_feature complement(order(470226..470228,470346..470348,
470352..470354,470925..470927))
/locus_tag="Caur_0371"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163676"
gene 471261..471809
/locus_tag="Caur_0372"
/db_xref="GeneID:5824762"
CDS 471261..471809
/locus_tag="Caur_0372"
/note="KEGG: aeh:Mlg_2619 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634011.1"
/db_xref="GI:163845967"
/db_xref="GeneID:5824762"
/translation="MDWSKQANDMIKMWTGTQQKVWDSWMASMQYMAAPQNPEAWQKT
VDSWRGTVKQTLEAQVELTRMWAEAVAANSVNMPNLPPIPGVPTIPGLNPASPTSVVE
WSRQVLELTRNFTESQTRFIEGWFEMLKKSDPTTIARGWDTTQMQKVMQSWQEAMQRV
IEAQAELGKVLMGVVNNTVEKK"
gene complement(471908..472708)
/locus_tag="Caur_0373"
/db_xref="GeneID:5825776"
CDS complement(471908..472708)
/locus_tag="Caur_0373"
/note="TIGRFAM: phosphomethylpyrimidine kinase;
PFAM: Phosphomethylpyrimidine kinase type-1;
KEGG: sfu:Sfum_1692 phosphomethylpyrimidine kinase"
/codon_start=1
/transl_table=11
/product="phosphomethylpyrimidine kinase"
/protein_id="YP_001634012.1"
/db_xref="GI:163845968"
/db_xref="InterPro:IPR004399"
/db_xref="InterPro:IPR013749"
/db_xref="GeneID:5825776"
/translation="MTLPRCLTIAGSDSGGGAGIQADLKAFAALGAYGMSVLTAVTAQ
NTVGVQGVVELPAAFVGQQIDSVVTDIGVDAVKTGMLANADIIAVVAEKARAYQWPYL
VVDPVMVAKSGHPLLHPEAQQALITLLLPLATIVTPNLPEARALTGLNITTIAEMEQA
AQMIHAMGPRWVLVKGGHLEGDSVDVLFDGAQYQYFTAPRIETRHTHGTGCTFASAIA
AGLAKGLSVPDAVAQAKEYITTALRHAPGLGQGHGPVHHFAAWYGVAE"
misc_feature complement(471974..472639)
/locus_tag="Caur_0373"
/note="4-amino-5-hydroxymethyl-2-methyl-pyrimidine
phosphate kinase (HMPP-kinase) catalyzes two consecutive
phosphorylation steps in the thiamine phosphate
biosynthesis pathway, leading to the synthesis of vitamin
B1. The first step is the phosphorylation of...; Region:
HMPP_kinase; cd01169"
/db_xref="CDD:29353"
misc_feature complement(order(472508..472513,472523..472525,
472532..472534,472541..472546,472550..472552,
472556..472561,472574..472588,472595..472597,
472601..472618,472625..472627,472634..472639))
/locus_tag="Caur_0373"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29353"
misc_feature complement(order(472076..472078,472469..472471,
472577..472579))
/locus_tag="Caur_0373"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29353"
misc_feature complement(order(472079..472081,472085..472087,
472184..472186,472283..472285,472394..472396))
/locus_tag="Caur_0373"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29353"
gene complement(472705..473355)
/locus_tag="Caur_0374"
/db_xref="GeneID:5825777"
CDS complement(472705..473355)
/locus_tag="Caur_0374"
/EC_number="2.5.1.3"
/note="KEGG: mta:Moth_2162 thiamine-phosphate
pyrophosphorylase;
TIGRFAM: thiamine-phosphate pyrophosphorylase;
PFAM: thiamine monophosphate synthase"
/codon_start=1
/transl_table=11
/product="thiamine-phosphate pyrophosphorylase"
/protein_id="YP_001634013.1"
/db_xref="GI:163845969"
/db_xref="InterPro:IPR003733"
/db_xref="GeneID:5825777"
/translation="MSIAHIVDWRLYVVTDAGLSRGRSHRAVIEAAIVGGATVVQYRE
KHASTRQMIEEALELRDLTRRAGVPLIVNDRVDVALAVDADGVHVGQDDMPVALARRL
IGNKLLGVSAHNLSEALQAVRDGADYLGVGPIFATTTKPDAAAPIGLDGLRAIRQHVS
IPIVAIGGINQANAADVMRAGADGIAVVSAVVAADDVTAAARQLRALVSVTQEKAL"
misc_feature complement(472819..473325)
/locus_tag="Caur_0374"
/note="Thiamine monophosphate synthase (TMP
synthase)/TenI. TMP synthase catalyzes an important step
in the thiamine biosynthesis pathway, the substitution of
the pyrophosphate of 2-methyl-4-amino-5-
hydroxymethylpyrimidine pyrophosphate by 4-methyl-5-;
Region: TMP_TenI; cd00564"
/db_xref="CDD:73367"
misc_feature complement(order(472852..472854,472864..472866,
472939..472941,472945..472947,472966..472968,
472972..472974,473023..473025,473092..473094,
473227..473229,473233..473235,473314..473316,
473320..473322))
/locus_tag="Caur_0374"
/note="thiamine phosphate binding site [chemical binding];
other site"
/db_xref="CDD:73367"
misc_feature complement(order(472852..472854,472936..472941,
472945..472947,473023..473025,473077..473079,
473134..473139,473221..473223,473227..473229,
473233..473235))
/locus_tag="Caur_0374"
/note="active site"
/db_xref="CDD:73367"
misc_feature complement(order(472936..472938,473023..473025,
473077..473079,473086..473088,473134..473139,
473221..473223,473227..473229))
/locus_tag="Caur_0374"
/note="pyrophosphate binding site [ion binding]; other
site"
/db_xref="CDD:73367"
gene complement(473383..474192)
/locus_tag="Caur_0375"
/db_xref="GeneID:5825778"
CDS complement(473383..474192)
/locus_tag="Caur_0375"
/EC_number="2.7.1.50"
/note="catalyzes the formation of
4-methyl-5-(2-phosphoethyl)-thiazole and ADP from
4-methyl-5-(2-hydroxyethyl)-thiazole and ATP"
/codon_start=1
/transl_table=11
/product="hydroxyethylthiazole kinase"
/protein_id="YP_001634014.1"
/db_xref="GI:163845970"
/db_xref="InterPro:IPR000417"
/db_xref="GeneID:5825778"
/translation="MTLNERIAELRERVRQQRPLIHHITNFVVMNDTANVTLHIGGLP
VMAHDRAEVAEMVTAAGALVLNVGTLSPDWIEAMLIAGRRANELGIPIVLDPVGAGAT
SLRTASNRRLLEELQIAVVRGNSGEIGALAGMGGVVKGVETVVEVDDPTAAAKALAQQ
YRTVVAVTGRQDVVTDGKRVFLVDNGHEWLKTLTGTGCSATTVIAAFAAVEREYPFAA
AAALACFGLAAELAAPAARGPASFKVAFYDAIYHLSADQIRAGARVTAVAG"
misc_feature complement(473440..474159)
/locus_tag="Caur_0375"
/note="4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase
catalyzes the phosphorylation of the hydroxylgroup of Thz.
A reaction that allows cells to recycle Thz into the
thiamine biosynthesis pathway, as an alternative to its
synthesis from cysteine, tyrosine...; Region: THZ_kinase;
cd01170"
/db_xref="CDD:29354"
misc_feature complement(order(473986..473991,473995..473997,
474055..474057,474061..474063,474079..474081,
474091..474093,474109..474111,474115..474117))
/locus_tag="Caur_0375"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29354"
misc_feature complement(order(473440..473442,473449..473454,
473458..473466,473470..473475,473611..473622,
473878..473883,473980..473991,474025..474030,
474037..474042,474046..474057,474079..474081,
474088..474093,474097..474114))
/locus_tag="Caur_0375"
/note="multimerization interface [polypeptide binding];
other site"
/db_xref="CDD:29354"
misc_feature complement(order(473599..473601,473605..473607,
473623..473625,473677..473679,473683..473685,
473689..473691,473812..473814,473821..473823,
473827..473829,473908..473910))
/locus_tag="Caur_0375"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29354"
misc_binding complement(474297..474419)
/note="TPP riboswitch (THI element) as predicted by Rfam
(RF00059), score 62.60"
/bound_moiety="thiamin/thiaminpyrophosphate"
STS 474738..474870
/standard_name="D1S3693"
/db_xref="UniSTS:474271"
gene complement(475047..476720)
/locus_tag="Caur_0376"
/db_xref="GeneID:5825779"
CDS complement(475047..476720)
/locus_tag="Caur_0376"
/EC_number="1.3.99.4"
/note="PFAM: fumarate reductase/succinate dehydrogenase
flavoprotein domain protein; FAD dependent oxidoreductase;
KEGG: afm:AFUA_4G14850 extracellular 3-ketosteroid
1-dehydrogenase, putative"
/codon_start=1
/transl_table=11
/product="3-oxosteroid 1-dehydrogenase"
/protein_id="YP_001634015.1"
/db_xref="GI:163845971"
/db_xref="InterPro:IPR003953"
/db_xref="InterPro:IPR006076"
/db_xref="GeneID:5825779"
/translation="MDRSDYQTDVLIVGSGAGALVAALVAKEAGLETLVIEKTDLVGG
SSAMSGGGLWIPNNPVSREAGVEDSFEMAWRYLEEVVPAAGPAASPDRRRAFLEYGPQ
MVEFLRRLGFRWHAAIGYPDYYPERPGGSKRGRAIEGSIFDGRQLGPWLKRLRPFPGA
PPIPIHTNEVASFLVSLRTVRGFLMAMRVFGRFFQRALGKVPMGLGASLVGQLLWLCL
QRNIPIWLESSLEELVVDHGRVAGAVVRREGRTLRVAARRGVLLAAGGFEHHGEMRER
YLPKPTSTDWAVGASGNTGDAIRAAQALGAAVALMDKAWGGPVVILPQGQVSFLVGER
SLPFSIIVDSKGERFMNESASYVDCWRWQYERHRQTPAIPAWLIMESRHRRYYPFGLL
PPGITPQSATSSQFLVRAQTLRELAMRIGIDPDGLERTVVRFNRMAQQGKDEDFHRGE
SAYDRFYSDPRVKPNPNLGPLERPPFYATAIYPGELGTLGGLLTDEWGQVLHENGEPI
PGLYATGNTSASVFGGTYPGPGSTLGPACTFAYIAMQHIVQNMQLVERV"
misc_feature complement(475077..476627)
/locus_tag="Caur_0376"
/note="3-ketosteroid-delta-1-dehydrogenase; Reviewed;
Region: PRK12844"
/db_xref="CDD:183787"
gene complement(476743..477564)
/locus_tag="Caur_0377"
/db_xref="GeneID:5825780"
CDS complement(476743..477564)
/locus_tag="Caur_0377"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR
domain protein;
KEGG: ttj:TTHA0660 oxidoreductase, short-chain
dehydrogenase/reductase family"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_001634016.1"
/db_xref="GI:163845972"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR002424"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:5825780"
/translation="MKVKNKVFVVTGGASGLGRELVLRLLDMGANVAAVDINGAALDE
LVGQAGQARSKLSTHVVNIADLAAVQALPEKVLSVHGAVDGLINNAGIIQPFVKVNDL
EDAAIDRVLKVNFYGTLYMTKSFLPYLIKRPVAHIVNISSMGALVPVPGQTMYGASKA
AVKLFTEGLRSELLNTNVRVTIVFPGAMATDIVKNSNVAQSSLPMQAAQAQRSSRMKA
LSPKEAARIIIDGIEGDRYRILVGSDARMMDWLSRLNPRWAAELIYRQMQHLLSR"
misc_feature complement(476770..477552)
/locus_tag="Caur_0377"
/note="short chain dehydrogenase; Provisional; Region:
PRK06181"
/db_xref="CDD:180447"
misc_feature complement(476860..477540)
/locus_tag="Caur_0377"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(476992..476997,477001..477012,
477088..477090,477100..477102,477139..477147,
477226..477228,477292..477300,477376..477384,
477451..477459,477514..477525,477529..477531))
/locus_tag="Caur_0377"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(477088..477090,477100..477102,
477139..477141,477223..477225))
/locus_tag="Caur_0377"
/note="active site"
/db_xref="CDD:212491"
gene complement(477870..478859)
/locus_tag="Caur_0378"
/db_xref="GeneID:5825781"
CDS complement(477870..478859)
/locus_tag="Caur_0378"
/note="PFAM: aminoglycoside phosphotransferase;
KEGG: afm:AFUA_3G11050 hypothetical protein"
/codon_start=1
/transl_table=11
/product="aminoglycoside phosphotransferase"
/protein_id="YP_001634017.1"
/db_xref="GI:163845973"
/db_xref="InterPro:IPR002575"
/db_xref="GeneID:5825781"
/translation="MKSKTKNTKTRAQIEAMVARAFGGMALADDEGAVYELKDGWFNA
VYSIRLANGQEVILKIAPPPDAEVMSYEKNIMATEVATMRLVRQNPAIPVPNIYFCDD
THEVCDADYFFMEKLAGDTLAHMRARLPAATLATLEYQIGTIIREINSFRGTYFGYEG
NPDLRASTWKEAFIRIMDAVLEDAARKRVTFDYSYDEIRDVVWKHAAALEEVTIPCLV
HWDAWDANFFVQQGRIVGIIDFERVLWADPLMEAQFRPFFGDGITNSMRGYGKTSFTF
AEKQRCYLYSLHLALVMHTECYYRNYDTDEIFNFSKGFIARSMAWLRANYVYG"
sig_peptide complement(478773..478859)
/locus_tag="Caur_0378"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.978) with cleavage site probability 0.978 at
residue 29"
misc_feature complement(478107..478754)
/locus_tag="Caur_0378"
/note="Phosphotransferase enzyme family; Region: APH;
pfam01636"
/db_xref="CDD:201896"
misc_feature complement(478107..>478274)
/locus_tag="Caur_0378"
/note="Aminoglycoside 3'-phosphotransferase (APH) and
Choline Kinase (ChoK) family. The APH/ChoK family is part
of a larger superfamily that includes the catalytic
domains of other kinases, such as the typical
serine/threonine/tyrosine protein kinases (PKs); Region:
APH_ChoK_like; cd05120"
/db_xref="CDD:88612"
gene complement(478967..481228)
/locus_tag="Caur_0379"
/db_xref="GeneID:5825782"
CDS complement(478967..481228)
/locus_tag="Caur_0379"
/note="PFAM: glycoside hydrolase family 3 domain protein;
KEGG: rpc:RPC_1611 glycoside hydrolase, family 3-like"
/codon_start=1
/transl_table=11
/product="glycoside hydrolase family 3"
/protein_id="YP_001634018.1"
/db_xref="GI:163845974"
/db_xref="InterPro:IPR001764"
/db_xref="InterPro:IPR002772"
/db_xref="GeneID:5825782"
/translation="MTTNDALVQRANDLLAAMTLEEKAGQISQYFYFRGLTAQNELVE
AQVRAGQVGSLLFVADPRETNRLQRIAVEESRLGIPLLFGFDVIHGLRTIFPVPLGMA
ASWDPQLYERVQAIAAREARAVGIHWTFAPMVDIARDPRWGRIVEGAGEDPYLGAQMA
AAQVRGFQGEAIGAPEHVVAGPKHYVGYGAALGGRDYDEVNISESELRNVYLPPFAAA
VAAGAGNVMTSYVGIDGVPGAADRYLLTDVLRGELGFKGFVVSDAAAVMDLVTHGFAR
DAQDAAVRALRAGLDMEMWLGMRFVPGTNPIPTVGAFSTLAEAVRSGVIEESLLDEAV
RRVLLVKLRLGLFEQPYVNEGAAGAILNDPAHREMARIAAERAAVLLRNEGNILPLDR
SAVRQVAVIGPLADDRAATLGPWVFAPDLNATVTVLEGLRRTAGEGVRVEYAPGVPMP
TRAIPSPFASLSQALGMPASSETSFDEEAEFARAVALARASDVAVLVLGEAADMNGEA
ASRSTLDLPGRQLELLEAVAATGTPVVVVLLSGRPLDLRRVLPCSAAILVAWHPGSEG
GNAVARLLWGDATPGGKLPFSWPRSVGQVPIIYSRLNSHQPATSHQRYWEEESTPLYP
FGFGLTYGQVEYRNLTLSATQIGLEDTIEATVEVHNTSAREVEEVAQLYLHQRYGRAA
RPVRELKGFERVTLKPGERRTLRFAIPPSARRYWSKADSAYVLDESDFDVWVGGDSTA
ALHAEFSVRSSTV"
misc_feature complement(478991..481216)
/locus_tag="Caur_0379"
/note="beta-D-glucoside glucohydrolase; Provisional;
Region: PRK15098"
/db_xref="CDD:185053"
misc_feature complement(480230..481174)
/locus_tag="Caur_0379"
/note="Glycosyl hydrolase family 3 N terminal domain;
Region: Glyco_hydro_3; pfam00933"
/db_xref="CDD:201514"
misc_feature complement(479015..479227)
/locus_tag="Caur_0379"
/note="Fibronectin type III-like domain; Region: Fn3-like;
pfam14310"
/db_xref="CDD:206478"
gene complement(481331..482578)
/locus_tag="Caur_0380"
/db_xref="GeneID:5825783"
CDS complement(481331..482578)
/locus_tag="Caur_0380"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: chu:CHU_1068 transport protein, MFS family"
/codon_start=1
/transl_table=11
/product="major facilitator transporter"
/protein_id="YP_001634019.1"
/db_xref="GI:163845975"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:5825783"
/translation="MPTNKTRVSGIGLIVLAFVAFIALGLPDGLLGVGWPSIRDSFAV
PLDAIGMLLTTVIAGYMISSFFSGFLLSRLGVGRMLAASCLLTGMALIGYTVVPHWWM
MVALGVFAGLGAGAIDAGLNTYVAAHFGETLMQWLHASWGVGVTIGPILMTLGLTTLN
TWHFGYQIVGIFQIALAICFVLTLAMWASHARNVPSGDEPAKRLTDYQTPMIETLRQP
QVWLSVMLFFLYVGAESSLGIWTYTLLTESRGVDQALAGFFAGSYWFTFTIGRIAAGM
ITIRTGATRLVFTGLSGALLGAVLLIWNPSQLMNVVAVALIGLAIAPIFPALMSDTSM
RVGDHHAANTIGMQMTATGFGTAVIPGLMGVLAQRVSLEIIPLCLLVVYASLFGLYLL
VVRLRRVSVTVVAAKTGPTQAIK"
sig_peptide complement(482501..482578)
/locus_tag="Caur_0380"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.987) with cleavage site probability 0.985 at
residue 26"
misc_feature complement(481409..482539)
/locus_tag="Caur_0380"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(<481715..482533)
/locus_tag="Caur_0380"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature complement(order(481511..481513,481520..481525,
481532..481537,481544..481549,481580..481582,
481589..481594,481604..481606,481613..481618,
481625..481627,481766..481768,481778..481780,
481787..481789,481799..481801,481811..481813,
481853..481855,481862..481867,481874..481879,
481886..481888,482144..482146,482162..482167,
482174..482179,482201..482203,482210..482215,
482222..482227,482234..482239,482375..482380,
482384..482389,482399..482401,482408..482413,
482420..482422,482471..482476,482480..482488,
482495..482497))
/locus_tag="Caur_0380"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(482668..483681)
/locus_tag="Caur_0381"
/db_xref="GeneID:5825784"
CDS complement(482668..483681)
/locus_tag="Caur_0381"
/EC_number="5.1.1.1"
/note="PFAM: regulatory protein LacI; periplasmic binding
protein/LacI transcriptional regulator;
KEGG: sde:Sde_3960 transcriptional regulator, LacI family"
/codon_start=1
/transl_table=11
/product="alanine racemase"
/protein_id="YP_001634020.1"
/db_xref="GI:163845976"
/db_xref="InterPro:IPR000843"
/db_xref="InterPro:IPR001761"
/db_xref="GeneID:5825784"
/translation="MSKKSVQTLEDIARLANVSRSTVSRALNNSPLISKQTRERIQAI
AREHNFCLNVSGRNLRLRSSRTIAFVAPMCFPPVASAEHLFGLEMLGAIWSGLHELNY
DCLIVHSASQDTDWVHRYLHSGRVDGFILMESSFKQTQIEALVQMKVPFIVWGMPVSP
FNYCSVTGDNVAGGRLATEYLIRTGRQRIAFLGGLKGTLTVENRFKGYEQALQLAGRA
LDPALIVYGDYTYASGAAGMQRLLERAPDLDAVFVNSDLMAIAAINVIQESGRSVPAD
IAVVGYDDLSIAGYATLPLTTIRQNIPLAGKLLAQNLIQHIETGLVTNVTVPVELVIR
KSA"
misc_feature complement(482674..483660)
/locus_tag="Caur_0381"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:31797"
misc_feature complement(483502..483651)
/locus_tag="Caur_0381"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature complement(order(483502..483507,483511..483516,
483523..483525,483532..483534,483571..483573,
483580..483585,483598..483600,483607..483612,
483616..483630))
/locus_tag="Caur_0381"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature complement(483505..483534)
/locus_tag="Caur_0381"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature complement(482674..483498)
/locus_tag="Caur_0381"
/note="Ligand binding domain of a transcription regulator
of cellulose genes, CelR, which is highly homologous to
the LacI-GalR family of bacterial transcription
regulators; Region: PBP1_CelR; cd06295"
/db_xref="CDD:107290"
misc_feature complement(order(482878..482883,482890..482892,
482902..482904,482986..482988,483307..483315,
483322..483324,483331..483333,483358..483360,
483364..483378,483397..483402,483406..483411,
483418..483426,483484..483486))
/locus_tag="Caur_0381"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:107290"
misc_feature complement(order(482782..482784,482833..482835,
482995..482997,483070..483072,483178..483180,
483217..483219,483286..483288,483415..483417,
483424..483429))
/locus_tag="Caur_0381"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107290"
gene 484035..484862
/locus_tag="Caur_0382"
/db_xref="GeneID:5825785"
CDS 484035..484862
/locus_tag="Caur_0382"
/note="TIGRFAM: translation initiation factor IF-3;
PFAM: initiation factor 3;
KEGG: rrs:RoseRS_1032 translation initiation factor IF-3"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-3"
/protein_id="YP_001634021.1"
/db_xref="GI:163845977"
/db_xref="InterPro:IPR001288"
/db_xref="GeneID:5825785"
/translation="MPRLSPVARRRSRAIRDRFRINNRIRAREVRLIDENGTQVGIVP
LREALAMAEERGFDLVEVAPNAVPPVCRLLDYGKFRYEQSKKEREARRNQKQSELKQI
RLMPKTDDHDVAVKANQARRFLLAGDKVKFNLRFRGREMAHPEIGRQMLDQIAEQLSD
IAVIEQKPLMEGRVLSMLLAPTAKVLKAAQQAQKAAAQRTTTAESAKPATSAASTPAT
AEPADEEEEELIDDGDVVEEDEDDDDTFVADYDDEDDDFEDDDDDDEDDERNRRRRR"
misc_feature 484119..484577
/locus_tag="Caur_0382"
/note="translation initiation factor IF-3; Region: infC;
TIGR00168"
/db_xref="CDD:129272"
misc_feature 484119..484307
/locus_tag="Caur_0382"
/note="Translation initiation factor IF-3, N-terminal
domain; Region: IF3_N; pfam05198"
/db_xref="CDD:191228"
misc_feature 484320..484577
/locus_tag="Caur_0382"
/note="Translation initiation factor IF-3, C-terminal
domain; Region: IF3_C; pfam00707"
/db_xref="CDD:201407"
gene 484918..485124
/locus_tag="Caur_0383"
/db_xref="GeneID:5825786"
CDS 484918..485124
/locus_tag="Caur_0383"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634022.1"
/db_xref="GI:163845978"
/db_xref="GeneID:5825786"
/translation="MPKMKMKTHKGAKKRFKVTASGKFLQQRGVRGNKRNRPSRSQRA
WGKDQPISPTNRRMLQTALPYGLE"
misc_feature 484960..485115
/locus_tag="Caur_0383"
/note="Ribosomal protein L35; Region: Ribosomal_L35p;
cl00392"
/db_xref="CDD:185963"
gene 485273..485632
/gene="rplT"
/locus_tag="Caur_0384"
/db_xref="GeneID:5825787"
CDS 485273..485632
/gene="rplT"
/locus_tag="Caur_0384"
/note="binds directly to 23S ribosomal RNA prior to in
vitro assembly of the 50S ribosomal subunit"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L20"
/protein_id="YP_001634023.1"
/db_xref="GI:163845979"
/db_xref="InterPro:IPR005812"
/db_xref="InterPro:IPR005813"
/db_xref="GeneID:5825787"
/translation="MARVKRGIMVRKRHKKLLEQAKGYRGARSRHYKVAHEAVMHALA
DAYRDRRRRKRDFRRLWIMRINAAARLHGTTYSRLINSLKQANIEIDRKMLADLAVRD
PQAFARIVEQAQAAVTA"
misc_feature 485273..485608
/gene="rplT"
/locus_tag="Caur_0384"
/note="ribosomal protein L20; Region: rpl20; CHL00068"
/db_xref="CDD:177008"
misc_feature 485288..485605
/gene="rplT"
/locus_tag="Caur_0384"
/note="Ribosomal protein L20; Region: Ribosomal_L20;
cd07026"
/db_xref="CDD:197305"
misc_feature order(485288..485305,485309..485320,485333..485356,
485360..485371,485378..485383,485393..485398,
485405..485449,485453..485461,485468..485470,
485480..485482,485498..485503,485510..485515,
485522..485524,485546..485554)
/gene="rplT"
/locus_tag="Caur_0384"
/note="23S rRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:197305"
misc_feature order(485378..485380,485390..485392,485399..485404,
485408..485413,485420..485422,485537..485548,
485555..485557,485573..485578,485594..485599)
/gene="rplT"
/locus_tag="Caur_0384"
/note="L21 binding site [polypeptide binding]; other site"
/db_xref="CDD:197305"
misc_feature order(485441..485443,485450..485455,485462..485464,
485471..485476,485480..485482,485552..485554,
485561..485563,485570..485572)
/gene="rplT"
/locus_tag="Caur_0384"
/note="L13 binding site [polypeptide binding]; other site"
/db_xref="CDD:197305"
gene 485650..486432
/locus_tag="Caur_0385"
/db_xref="GeneID:5825788"
CDS 485650..486432
/locus_tag="Caur_0385"
/note="PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O
ribose methyltransferase substrate binding;
KEGG: rrs:RoseRS_1035 tRNA/rRNA methyltransferase (SpoU)"
/codon_start=1
/transl_table=11
/product="tRNA/rRNA methyltransferase SpoU"
/protein_id="YP_001634024.1"
/db_xref="GI:163845980"
/db_xref="InterPro:IPR001537"
/db_xref="InterPro:IPR013123"
/db_xref="GeneID:5825788"
/translation="MALISSPANHHVKWLRSLAESARHRRRERSFVIEGVRLVTDALT
AGAEVRLVLYAPDQLATTTAGTALLNRLRHLPHCFPATPAVIVAAADTEQPQGVVAAV
TWPELPPRPGLRLVLDAIQDPGNVGTLLRSAAAAGVGLVMCAPGTVDPFNPKVARAAM
GAHFLVPLRVSPWETIRAELQSYTVYAADSAGQQPYYAVDWRQPAALIVGNEAHGLSE
PARALAHQTITIPMSGSIESLNAGVAGSIILFEALRQQTVAH"
misc_feature 485737..486417
/locus_tag="Caur_0385"
/note="rRNA methylases [Translation, ribosomal structure
and biogenesis]; Region: SpoU; COG0566"
/db_xref="CDD:30912"
misc_feature 485746..485955
/locus_tag="Caur_0385"
/note="RNA 2'-O ribose methyltransferase substrate
binding; Region: SpoU_sub_bind; smart00967"
/db_xref="CDD:198035"
misc_feature 485983..486399
/locus_tag="Caur_0385"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
pfam00588"
/db_xref="CDD:201328"
gene 486557..487606
/gene="pheS"
/locus_tag="Caur_0386"
/db_xref="GeneID:5825789"
CDS 486557..487606
/gene="pheS"
/locus_tag="Caur_0386"
/note="catalyzes a two-step reaction, first charging a
phenylalanine molecule by linking its carboxyl group to
the alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA; forms a heterotetramer of
alpha(2)beta(2); binds two magnesium ions per tetramer;
type 1 subfamily"
/codon_start=1
/transl_table=11
/product="phenylalanyl-tRNA synthetase subunit alpha"
/protein_id="YP_001634025.1"
/db_xref="GI:163845981"
/db_xref="InterPro:IPR002319"
/db_xref="InterPro:IPR004188"
/db_xref="InterPro:IPR004529"
/db_xref="InterPro:IPR006195"
/db_xref="GeneID:5825789"
/translation="MTTLLDELTTLEQEALTALETVADLSALTEWKSRFIGKQGRLSR
LSRGLGALPASERPLVGQRVNALREQLEAAFSAAKERLEAQAVAAELAAERIDVTMPG
RRPAVGYVHLTNQILRQVQHIFAEMGFQVWESPEVEYDAFNFSLLNFPDDHPARDMQD
TFYVEMPAGAPSVLLRTHTSPGQIHAMRRNAPNPLRVLIPGKVYRNEQVTVRSEMMFH
QFEFLAVGRNVTMADLKGTLSFFAERMFGPGTRVRLRPSFFPFTEPSAEMDVTCFLCG
GKGCRICKYAGWLEIGGCGMVHPNVLRNGGYDPAEFSGFAGGFGPERVAMLKYGIDDI
RWFYSGDQRFVEQFG"
misc_feature 486620..487600
/gene="pheS"
/locus_tag="Caur_0386"
/note="phenylalanyl-tRNA synthetase subunit alpha;
Validated; Region: pheS; PRK00488"
/db_xref="CDD:179046"
misc_feature 486620..486793
/gene="pheS"
/locus_tag="Caur_0386"
/note="Aminoacyl tRNA synthetase class II, N-terminal
domain; Region: Phe_tRNA-synt_N; pfam02912"
/db_xref="CDD:111764"
misc_feature 486887..487585
/gene="pheS"
/locus_tag="Caur_0386"
/note="Phenylalanyl-tRNA synthetase (PheRS) alpha chain
catalytic core domain. PheRS belongs to class II
aminoacyl-tRNA synthetases (aaRS) based upon its structure
and the presence of three characteristic sequence motifs.
This domain is primarily responsible...; Region:
PheRS_alpha_core; cd00496"
/db_xref="CDD:29807"
misc_feature order(486887..486889,486896..486898,486905..486910,
486929..486931,486944..486949,486953..486961,
487010..487012,487025..487027,487037..487054,
487112..487114,487136..487144,487154..487156,
487160..487162,487166..487168,487172..487174,
487196..487198,487247..487255,487259..487264,
487322..487324,487343..487351,487355..487357,
487448..487453,487568..487570,487574..487582)
/gene="pheS"
/locus_tag="Caur_0386"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29807"
misc_feature 486941..486961
/gene="pheS"
/locus_tag="Caur_0386"
/note="motif 1; other site"
/db_xref="CDD:29807"
misc_feature order(487025..487033,487088..487090,487094..487096,
487103..487105,487169..487171,487175..487177,
487190..487198,487205..487207,487211..487213,
487217..487219,487331..487333,487337..487342,
487424..487441,487505..487516,487523..487525,
487556..487558)
/gene="pheS"
/locus_tag="Caur_0386"
/note="active site"
/db_xref="CDD:29807"
misc_feature 487166..487177
/gene="pheS"
/locus_tag="Caur_0386"
/note="motif 2; other site"
/db_xref="CDD:29807"
misc_feature 487508..487525
/gene="pheS"
/locus_tag="Caur_0386"
/note="motif 3; other site"
/db_xref="CDD:29807"
gene 487610..488482
/locus_tag="Caur_0387"
/db_xref="GeneID:5825790"
CDS 487610..488482
/locus_tag="Caur_0387"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634026.1"
/db_xref="GI:163845982"
/db_xref="GeneID:5825790"
/translation="MRRDELNRAIHDLYRAEHEALGERGGYELLERARQWNLAPTLAA
GGVIVFPHAGVADCGHQIAAAVHACLDSGADRVLVISVLHAWNDEMEQARRRVAAGGS
PSAERYWGIQGPGLQRGNEWQLDHALYSFRFFWELETRRRGIRGPQVIERYPYLAGGH
PELLPGIEELIELAQDAVIVSTADPFHHGIGYGDPPEQSFAPAEGGLELARQTIEEGM
QLLANGDYWGYNQHCVRAKSDARDAGQVFRFLRGPLQGEILDLVASDATQLYQSPPPT
WVAAPLVRWTKVTV"
gene 488479..489411
/locus_tag="Caur_0388"
/db_xref="GeneID:5827673"
CDS 488479..489411
/locus_tag="Caur_0388"
/note="PFAM: protein of unknown function DUF6
transmembrane;
KEGG: rca:Rcas_2761 protein of unknown function DUF6
transmembrane"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634027.1"
/db_xref="GI:163845983"
/db_xref="InterPro:IPR000620"
/db_xref="GeneID:5827673"
/translation="MNRHRLWLYTVLFAGVLIASTASILIRYAQGTGMSSLSIAAGRL
GLAALILTPLALHRSSQEIRHLSRRDVIFGAAAGVFLAIHFASWISSLEYTSVASSAA
LVSTNPLWVGLASLFLFRERLPWTILVGIALTLIGTIVIGISDSSSSTQSNPLLGNTL
ALIGAMTASGYLLIGRDLRRRLSTMAYIWLVYTSAAVVLVIWTLISGQQFLGFPPQAY
LFVLGLALGPQLLGHTAFNYALSGLSATYVAVAILGEPIGSSLLAFLLFGETVAFLQF
VGIALLLVGIVIASIAEQQAPESTARQTAENQTA"
sig_peptide 488479..488568
/locus_tag="Caur_0388"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.991) with cleavage site probability 0.846 at
residue 30"
misc_feature 488974..489351
/locus_tag="Caur_0388"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:144477"
gene 489472..490467
/locus_tag="Caur_0389"
/db_xref="GeneID:5827674"
CDS 489472..490467
/locus_tag="Caur_0389"
/note="PFAM: Xylose isomerase domain protein TIM barrel;
KEGG: sme:SMc00267 hypothetical protein"
/codon_start=1
/transl_table=11
/product="xylose isomerase domain-containing protein"
/protein_id="YP_001634028.1"
/db_xref="GI:163845984"
/db_xref="InterPro:IPR012307"
/db_xref="GeneID:5827674"
/translation="MLIGLSALSFSYRCGLIGRGTPRAVSHPLDIEGVMALASRAGLQ
SVEFPLSLLPDLSPGRLSALRERLTLCGLTPVADSDIVDVDTLRAHIPAAAMIGAHVL
RVLISPVLEGYRRPFTTDWPAHLADVTDRLRAVIDLAAEHNIILAVENHQDATSADLA
AICAAVDSPHIGVCFDAVNCLVVGETPYAALERLGPLIRNVHLADYETYPTTQGWRLV
RCALGEGDLDIRRLFHLIEHYAPDVACQIELVSHSARHVRILDDDWWQGYPPCDVREV
LPVLRLFAQTMRLRDDDWRTPWERGAGEEQISLYEDQQYATSIAYLRTIGILPRL"
misc_feature 489574..490152
/locus_tag="Caur_0389"
/note="Xylose isomerase-like TIM barrel; Region:
AP_endonuc_2; pfam01261"
/db_xref="CDD:201692"
misc_feature <489844..490215
/locus_tag="Caur_0389"
/note="AP endonuclease family 2; These endonucleases play
a role in DNA repair. Cleave phosphodiester bonds at
apurinic or apyrimidinic sites; the alignment also
contains hexulose-6-phosphate isomerases, enzymes that
catalyze the epimerization of...; Region: AP2Ec; cl12060"
/db_xref="CDD:187176"
misc_feature order(489916..489918,490075..490077,490114..490116,
490120..490122,490213..490215)
/locus_tag="Caur_0389"
/note="Metal-binding active site; metal-binding site"
/db_xref="CDD:28903"
gene 490615..491100
/locus_tag="Caur_0390"
/db_xref="GeneID:5827675"
CDS 490615..491100
/locus_tag="Caur_0390"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634029.1"
/db_xref="GI:163845985"
/db_xref="GeneID:5827675"
/translation="MSARRIWWFVVGLLFVAGTLIWPQRSFSQAGIDQFFVDTLADNP
VADLNTHCTDALPNANCSLRQAIAKANAVAGSNRITINFDLVTEGSVASAPYIITITT
GQRLPPITRANVTISADLLNGAPQVAINANNNDAGLVLSGGGAIIEGLVIYGASNDAG
T"
sig_peptide 490615..490701
/locus_tag="Caur_0390"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.923) with cleavage site probability 0.705 at
residue 29"
gene 491087..494368
/locus_tag="Caur_0391"
/db_xref="GeneID:5827676"
CDS 491087..494368
/locus_tag="Caur_0391"
/note="KEGG: rca:Rcas_3733 conserved repeat domain"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634030.1"
/db_xref="GI:163845986"
/db_xref="InterPro:IPR006626"
/db_xref="GeneID:5827676"
/translation="MPARNRGSGIYISSSGNTVRNCSIGLTLDGSVPPDTLRNRNGIV
ISGSAAGNNQIGAANQPNTIAGNTVNGIVISNASDNRIQGNRIGVLFTTATVVRPNGG
FGVQILSDTTIDPNGRAERNLIGGTENSERNIIGGNGLSGVLISGSRTLTTTIASNLI
GVNLEAETGLGNNGDGVRIEDGAQATRIGSTNQTQPLVIGGNSGAGIRIHANGGAAPS
NTTIDGYVVVGLSRSGINARPNTQGGIYLTESAGTTTIGSSATTLRIGWNGGPGIWIG
PGISDVTITNAFVGALPGGILAANNGGVAINGATNVTMTASTVAANTAYDLQIANASN
VSLDGNLIGLHADGRSVAGSVTAGISVTNSTNVTIGNTTGNVIAAANGPGIDISGSSS
VSITVRANILGLRRDTTGDAYSVAAAHAGPAIRITDAAQISVAGNVIGGNGSAAGIEL
TNVQSATLTQNQIGWINDPGGGTTPLARPAGVGIALTNVTTATLSGNLLRLNTDDGVR
LTDSSAVIIDNANAIEENGGDGVQVGGNSRNVRITGNRIRANTGYAVLVTDTAQRVGI
TQNQMAANSAGGIHLANTTLYSGTGADPDQSLNRPNHSIDPPFDIQVSQDGIITGRVF
TSTAEREEDLVPVSACAGCTIQVYSPNPDLPSADGQGWQQLQVVVNGNTRADINQVSA
SGVFNAQMLDAPATYRQLIFAATDQFGNTSPFHIFTPTVDLRLIPLDPVQQSAAPGSS
ISYRLQLENHGTLQINRIRLSTSGTLSGWTVATDPAERFSLPPGGTRQITITLTLPTG
THPSIQVPITDTTTLSLTAPAMSAITQTLRTEVQALPVLAASPLTGAATVLPSDSYIY
RHQITNNGNVTVPIDISATTADLVGLDTYNTTVLTPSVTLAPGASTEIAVRITVPTGA
QTTTPSGNPVRATTVITATPRGFGSQAITMTDTTTVGLRYAAELRSSYEQDVRAGREV
VFLHTLRNTSNGRATFQLNFAASRGSTLIAFESATSGVTISGNRVTLDNIADSGKINQ
IVLRVRVQISELILPGSRETLRIWVSIPDTTEPLSGAEVQDVAVVRDSSGVLVPAIWV
PLVMN"
misc_feature 492353..492841
/locus_tag="Caur_0391"
/note="Right handed beta helix region; Region: Beta_helix;
pfam13229"
/db_xref="CDD:205410"
misc_feature 493289..493483
/locus_tag="Caur_0391"
/note="NPCBM-associated, NEW3 domain of
alpha-galactosidase; Region: NPCBM_assoc; pfam10633"
/db_xref="CDD:151150"
gene 494379..499541
/locus_tag="Caur_0392"
/db_xref="GeneID:5827677"
CDS 494379..499541
/locus_tag="Caur_0392"
/note="TIGRFAM: conserved repeat domain protein;
SMART: Parallel beta-helix repeat;
KEGG: rca:Rcas_3732 parallel beta-helix repeat"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634031.1"
/db_xref="GI:163845987"
/db_xref="InterPro:IPR001434"
/db_xref="InterPro:IPR006626"
/db_xref="GeneID:5827677"
/translation="MHRRFRLALLFLILVSLLPFAQPASAASLVVNSLADTNDGACTT
APDGCTLREAILTANSNGVPDTITFSVSGTIYVQNSGLPPLSEGGTTIDAGDNHTIIV
SGEQLRDASNNVIPAHGIVIASNDNVIRGLVIIRFSRGIGFTGGGSGIYLRNNAQNNL
IVNTWIGHLNGSPEPNTGYGILIDGGASNNRIGTGNPTDRNVISGNTVADIGVSNNLN
TTPLNGNQIVGNYIGTTVSGDADQDTTSDPGNLGGISIENYAYNTLISGNLIGGYTGA
NAAGIVLFSDSTSSGSPSIPRGTRITGNWIGVNPTGTVIANRIGILVSGGGTYGAINT
EIGDPLNPIAGRNYIGGNTNGGIVIADTTFASGPTTIAGNYIGVALNASGNPFPVGNG
TINQTSGGEGIFVGRNAVSTIIGPGNVIAGARTNGIRIRSGNTVVRGNYIGVDPTGTQ
TTTTTINSPTVGYGTGDAGVWIENGSSSVIGGANLSDRNVIAAGNFAVTGSGAAVLIE
PCASGCSANGNTVQGNYLGVRADGNGILVGSTIVADSEGLRITNANNNTVRNNLIGGV
DRGINVRMNASNNLISGNRIGVRASSSDTPGSGTTTRRDGIQLNSGTNNRIEFNLIAF
TGQNNTSAFNAAHGIVVRSSNNQLFGNRLVRNGRLGFGHGIFVADNVTGVLISQNTTQ
DNAQDGIGLGSGANGDLAAPSFNAVTPGSPTVTGTTGCGAGCVVEIFTTSASVSDRNR
EGPVFLTSTTTGVGGAFSVNVTGCLGYITATVHNPTTGNSSPFSNALDVNATDACSTP
TATLTVTGGSSRAVSIGSTSTYTLTLSHTSFVTRTYTLTLDSTRGWTSGPTLVELPPN
GNTQLIISVAVPFTATAGDTDTTTVTARSDQTVSNPITLTTTAQAITIIPARPEVSPG
QIVERTGNTVTFVHTITNTGQLVGTFSVIRPDGSSGLPVFSGTPPTGWNIQSATLSSS
TLSPGATATLTIVANTPASTTLLAGDYPFSFRVRAISQQGSQTFTEQSDPATTDTVRV
PVARSFSFTAQPPTSQQLTPAATVNFSYILTNTGNITDTFIITPPTGTTPASSLSFSA
TPATAFTLAAGQSRPITVTVTASASEPVGTYNFTVQAGVTGGSNPPANQTASGTVQVI
GGGTPVFVGTPLVTPDPVLPGGTATITVTVRNGGNAAAPFDFTQTLPSGWNLISNSST
CPSPVPADTTTCTYVVEVAVPATADGGAATVTIQAIARNGGQIPPAPDSTASVNATVT
VATIRNLRFDPTPLNASADPGAVITFSHTLTNTGNAPDAFTLNLSGLPTGWTATVVPT
TTTTLARNASLTVTVQITVPTGISAGTTVTATIRATSQGNPAVSAEVLDSITVNAVNG
AELSPGTTINSLPGATAIFTHTLRNSGSTTITYDLSVRSGDAGWSALSVNPATSPILS
PGSSTIVTVTVTIPTGAAAGTSNTITVEARATGDSTLLASAENVVQVGALRDVEITPA
RTVIALPNTTTVITHTVRNLGFTADSYTITALQGDGHSAIATPNQVDLGPGESREIAV
LLTLPAGLAADTVLSSIRVTATSRSDSSITDSIFDSVRVGLVTGVALSSDRLQGIPDG
SNRVIFSGIVLENLGNATDTFDLTVSGLDSKFRASVVPTSVTLNGGAIDVGIVVTVDL
PPIQPFALRHDVTLTATSRRDPDQRSSIRLSMIYLTRQAIFGEPVFIPIISR"
sig_peptide 494379..494459
/locus_tag="Caur_0392"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.991 at
residue 27"
misc_feature 495861..>496433
/locus_tag="Caur_0392"
/note="nitrous oxide reductase family maturation protein
NosD; Region: NosD_copper_fam; TIGR04247"
/db_xref="CDD:211970"
misc_feature <497652..498101
/locus_tag="Caur_0392"
/note="Predicted membrane protein [Function unknown];
Region: COG1470"
/db_xref="CDD:31659"
misc_feature <497868..498449
/locus_tag="Caur_0392"
/note="Predicted membrane protein [Function unknown];
Region: COG1470"
/db_xref="CDD:31659"
gene 499571..500005
/locus_tag="Caur_0393"
/db_xref="GeneID:5827678"
CDS 499571..500005
/locus_tag="Caur_0393"
/EC_number="4.2.1.10"
/note="catalyzes the formation of 3-dehydroshikimate from
3-dehydroquinate in chorismate biosynthesis"
/codon_start=1
/transl_table=11
/product="3-dehydroquinate dehydratase"
/protein_id="YP_001634032.1"
/db_xref="GI:163845988"
/db_xref="InterPro:IPR001874"
/db_xref="GeneID:5827678"
/translation="MTKTILVLHGPNLNMLGRREPHIYGATTLAEINEALEQRGKAAG
VEVICIQSNHEGVLVDAVQTHGWTASGIIINPGALTHYGLSLRDALAMVSAPIIEVHL
SNVYQREAFRHTSVVAPIARGQITGLGWRGYLLALEWLLAEL"
misc_feature 499580..499969
/locus_tag="Caur_0393"
/note="Dehydroquinase (DHQase), type II. Dehydroquinase
(or 3-dehydroquinate dehydratase) catalyzes the reversible
dehydration of 3-dehydroquinate to form
3-dehydroshikimate. This reaction is part of two metabolic
pathways: the biosynthetic shikimate pathway...; Region:
DHQase_II; cd00466"
/db_xref="CDD:63885"
misc_feature order(499604..499606,499610..499612,499727..499741,
499748..499750,499757..499759,499802..499804,
499823..499825,499832..499837,499844..499846,
499904..499906)
/locus_tag="Caur_0393"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:63885"
misc_feature order(499625..499627,499640..499642,499793..499795,
499799..499804,499811..499813,499832..499834,
499871..499879,499904..499906)
/locus_tag="Caur_0393"
/note="active site"
/db_xref="CDD:63885"
misc_feature order(499880..499882,499886..499891,499922..499927,
499931..499942,499946..499954,499961..499963)
/locus_tag="Caur_0393"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:63885"
gene complement(500264..501268)
/locus_tag="Caur_0394"
/db_xref="GeneID:5827679"
CDS complement(500264..501268)
/locus_tag="Caur_0394"
/note="PFAM: amidohydrolase 2;
KEGG: rrs:RoseRS_2838 amidohydrolase 2"
/codon_start=1
/transl_table=11
/product="amidohydrolase 2"
/protein_id="YP_001634033.1"
/db_xref="GI:163845989"
/db_xref="InterPro:IPR006992"
/db_xref="GeneID:5827679"
/translation="MIDDAFVFDGVCHVFNFDKSNAFGKPGEMFIEHLYAFHQVLNAP
GEKTLSREEYMREWHVDEIARMIFDESPTDMIIAQPLPLTDLFKDGLSSWERCAEMAR
RYPDRAVFWGSVNPLEGKKALDLMEIQVKEYGARGFKLYNVRYDYGQPFPWRMDDPRV
AFPIFEKALELGVNIIGVHKGVPLGPQPVEHTQAWDMDGAAANFPEINFIIFHVGLPF
IDEICWQLVRYPNLYASIAATVNFVVRSPRVFAETMAKLLFWCGEDKIIYGGETPIWH
PRGALKAFWEFELPEDIVQGYGCGQLTKEAKKKILGLNLARLHGFDVEEKKRSLGIAA
"
misc_feature complement(500306..501118)
/locus_tag="Caur_0394"
/note="Amidohydrolase; Region: Amidohydro_2; pfam04909"
/db_xref="CDD:203119"
gene complement(501265..501702)
/locus_tag="Caur_0395"
/db_xref="GeneID:5827680"
CDS complement(501265..501702)
/locus_tag="Caur_0395"
/note="PFAM: protein of unknown function DUF59;
KEGG: rca:Rcas_0663 protein of unknown function DUF59"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634034.1"
/db_xref="GI:163845990"
/db_xref="InterPro:IPR002744"
/db_xref="GeneID:5827680"
/translation="MLRELSSVSCKQEVPMNETTTVGVGHDDVMAVLQRCYDPCCKER
QVSVVDMGLVERVNVDGQRVAIDIILTTGWCPFALHLLQMMEEEVKTLPGIEQVQVNI
TWDTPWSPERMSAQARERLRLPLEQLLPLREARLRRTQKEEAP"
misc_feature complement(501361..501624)
/locus_tag="Caur_0395"
/note="Domain of unknown function DUF59; Region: DUF59;
cl00941"
/db_xref="CDD:212251"
gene 502015..502524
/locus_tag="Caur_0396"
/db_xref="GeneID:5827681"
CDS 502015..502524
/locus_tag="Caur_0396"
/note="TIGRFAM: molybdenum cofactor synthesis domain
protein;
PFAM: molybdopterin binding domain;
KEGG: rca:Rcas_3229 molybdenum cofactor synthesis domain"
/codon_start=1
/transl_table=11
/product="molybdenum cofactor synthesis domain-containing
protein"
/protein_id="YP_001634035.1"
/db_xref="GI:163845991"
/db_xref="InterPro:IPR001453"
/db_xref="InterPro:IPR008284"
/db_xref="GeneID:5827681"
/translation="MSHQEHRRLAETQTTAIPCAVLTISDSRSEATDDSGRYICTALT
QAGHNVVQYAVVRDEPAQIVEMVRRFAAEGCKVIITNGGTGISRRDSTFEAIDALLEK
RLPGFGELFRMLSFAEIGPAAMLSRATAGVFGGTLIFCLPGSPNAVQLGIDRLILPEL
AHLVWETVR"
misc_feature 502063..502512
/locus_tag="Caur_0396"
/note="MogA_MoaB family. Members of this family are
involved in biosynthesis of the molybdenum cofactor (MoCF)
an essential cofactor of a diverse group of redox enzymes.
MoCF biosynthesis is an evolutionarily conserved pathway
present in eubacteria, archaea; Region: MogA_MoaB;
cd00886"
/db_xref="CDD:58167"
misc_feature order(502261..502269,502357..502359,502438..502443,
502453..502455,502462..502464)
/locus_tag="Caur_0396"
/note="MPT binding site; other site"
/db_xref="CDD:58167"
misc_feature order(502267..502269,502273..502278,502282..502284,
502294..502296,502318..502326,502339..502341,
502348..502353,502384..502386,502393..502395)
/locus_tag="Caur_0396"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:58167"
gene 502604..503242
/locus_tag="Caur_0397"
/db_xref="GeneID:5827682"
CDS 502604..503242
/locus_tag="Caur_0397"
/note="KEGG: rca:Rcas_0802 4-vinyl reductase 4VR"
/codon_start=1
/transl_table=11
/product="4-vinyl reductase 4VR"
/protein_id="YP_001634036.1"
/db_xref="GI:163845992"
/db_xref="GeneID:5827682"
/translation="MTSVEAFRGLYYPNKIGRLCFLSLEEVMGQNGVKALLRLADLQQ
YIDAYPPNDLKREFPFEAISKYSVALGTMYGPRGARGLELRAGRVAFSLGLKEFGPLL
GMADLALKLMPITMKLKIVLNATAQTFDRFSDQSSHVEEERGRFVYHITRCSNCITRP
EPGPVFYIARGILEEATAWVSGGRRFAVEQLSCMGQGNCSSCAFAIGKDPLE"
gene 503247..503459
/locus_tag="Caur_0398"
/db_xref="GeneID:5827683"
CDS 503247..503459
/locus_tag="Caur_0398"
/note="PFAM: protein of unknown function DUF37;
KEGG: rrs:RoseRS_3917 protein of unknown function DUF37"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634037.1"
/db_xref="GI:163845993"
/db_xref="InterPro:IPR002696"
/db_xref="GeneID:5827683"
/translation="MLRWLLLKLIRFYQVAISPWTPPSCIYTPTCSHYGYEAIKKYGA
LRGGWMTVKRIARCHPFARGGYDPVP"
misc_feature 503250..503453
/locus_tag="Caur_0398"
/note="Haemolytic domain; Region: Haemolytic; pfam01809"
/db_xref="CDD:201984"
gene 503950..504624
/locus_tag="Caur_0399"
/db_xref="GeneID:5827684"
CDS 503950..504624
/locus_tag="Caur_0399"
/note="TIGRFAM: RNA polymerase sigma factor, sigma-70
family;
PFAM: sigma-70 region 2 domain protein; sigma-70 region 4
domain protein; Sigma-70 region 4 type 2;
KEGG: rca:Rcas_0024 RNA polymerase, sigma-24 subunit, ECF
subfamily"
/codon_start=1
/transl_table=11
/product="sigma-70 family RNA polymerase sigma factor"
/protein_id="YP_001634038.1"
/db_xref="GI:163845994"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="GeneID:5827684"
/translation="MAEPSRETIVRAQQGDQQALTELIIGQQHYVYSIAMSVLKNADD
AADLTQEAFIRLFRALPQYSGESRFTTWLYRLVINLCRDELRRRGRQAPIVPPATDDE
ELDALHTVADNDRWVDPAQSLDLNQLRLEVRRALEQLEPHYRLVLTLYYFEDLKYTDI
AEILDLPLNTVKSHIRRGKERLAQLLQTNEPPATRAVNQPKRSATDDHVVQITPLRLL
PGWGRR"
misc_feature 503974..504510
/locus_tag="Caur_0399"
/note="RNA polymerase sigma factor RpoE; Provisional;
Region: PRK09652"
/db_xref="CDD:182019"
misc_feature 504040..504222
/locus_tag="Caur_0399"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature 504334..504495
/locus_tag="Caur_0399"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(504367..504369,504397..504399,504415..504420,
504448..504450,504454..504459,504463..504471,
504475..504480,504484..504486)
/locus_tag="Caur_0399"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 504628..505095
/locus_tag="Caur_0400"
/db_xref="GeneID:5827685"
CDS 504628..505095
/locus_tag="Caur_0400"
/note="KEGG: rca:Rcas_0025 putative transmembrane
anti-sigma factor"
/codon_start=1
/transl_table=11
/product="putative transmembrane anti-sigma factor"
/protein_id="YP_001634039.1"
/db_xref="GI:163845995"
/db_xref="GeneID:5827685"
/translation="MSTQLPTPPPDDLLDAALRHELRWEAPPELTNRLLHLVPGAVPM
ATAEISPLPRWRLYVAIALMSLLILVSIPSASYLYQLVWFQWGFAQFIAQLEALPARL
LQTFYETMPFARELVSIIALIRDQLHWLLVALVLWIILDNWQPERRLVHQESK"
gene complement(505523..506128)
/locus_tag="Caur_0401"
/db_xref="GeneID:5827686"
CDS complement(505523..506128)
/locus_tag="Caur_0401"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634040.1"
/db_xref="GI:163845996"
/db_xref="GeneID:5827686"
/translation="MLARIALSLLLGFICGTTGLVFMPDLARVIGPLVCTGNLEPDRS
EGVLHFRCRTINGDEQRIKLGQMLPYAIISTSLLLIPPVHSAIRRFERRRAVIQQAIE
RDLATALPARAEVLRVAIVGSYKRAILVRAVEVELTLWVYPPANRPYEARVIWLVEET
GLSHLRRGTMLNTRINPLRPQRVYPAESWASYIWSEPVPTV"
sig_peptide complement(506045..506128)
/locus_tag="Caur_0401"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.695) with cleavage site probability 0.562 at
residue 28"
gene complement(506281..510324)
/locus_tag="Caur_0402"
/db_xref="GeneID:5827687"
CDS complement(506281..510324)
/locus_tag="Caur_0402"
/EC_number="2.7.13.3"
/note="PFAM: response regulator receiver; GAF domain
protein; ATP-binding region ATPase domain protein;
histidine kinase A domain protein; CHASE domain protein;
PAS fold-4 domain protein;
KEGG: ana:alr3120 two-component hybrid sensor and
regulator"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_001634041.1"
/db_xref="GI:163845997"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR003018"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR006189"
/db_xref="InterPro:IPR013656"
/db_xref="GeneID:5827687"
/translation="MAQWSRRALISFGVVYAVLIWVGAQPLLANRGIPLLWVAGGFAA
GGVLLAGKRLLPIIFIGAFIAYTVVFRQLGLSSERLLAAALVFGLSAIIQAWLVNWLV
RRFGRTLPPSSIRYTLVVCGLLALAVLPAPFLAVMVLVVVQQPLVSSPPIVALQWWLN
LVAGVWLVTPWMVLGEYYRQRRPMREPWLWPVSSLLLALMLFSLQLIWRDANRQFTTQ
LQADVNEVVSLINDRLTIYEQALLSQSALFLASQRVDQHEFSVFSRTQLARLPALRAV
SWIPRIPLQQRTAFEHAMQETGLPDFRIREPDATARPADTRDEYYPITYLEPFARRRA
VLGLDLAADPVRRAAIEQARDSGQVVITAPLQSYLASDPAPAVLLFAPVYSGSLPPQS
VEERRQRIRGMVAFLIVPGEVIEQALRPVTTPDLEFVLVDATEESLRPLAVFTGGRAV
PSPYISDLDIVIRDAVAISDIPRYGRVWSIAFCLGTNYLPFWWSADAISRTVLAIASV
AIFFLFVAIRQRHEARQRRLTRTYALLSAINQMIIRERDPQRIFQEVCQVGIGEGGFR
LVWIGRHNLVTSRFETIAIHSAKELDQSLVHLLTGEQLAMTLSPVCQGDRVVINDLAT
DPRCAAWRSQAVAYGLRAMAGFPLVVPDEPPAVLCFYAGQPAAFDHDEIQLLDELVRD
IIFGLLVSQQEAQLRTSEQRNHLIVSALPDLVLRLRPDGQVVDVVAAESMVLPMAPTA
MINSTLEQLFPAAIATQYRQALSAAFASGELQTLAYQLIVEAKEYFFEARIKAALPAE
EAIAIVRDVTAWRNAELALQVERDLLAQRVAERTAELHRANAELLRAARTKDEFLANM
SHELRTPLNSILALSESLLEELYGPLRDQQQKAIRAIEASGRHLLALINDVLDLAKIE
ANRIELVKEVVAASDVCEASMALVKEQATKKQIHLSIQLDDPHARFVADPRRLKQILV
NLLSNAVKFTPAGGAVSLQVTTDTTQGTIAFTVSDTGIGIAEEDLSRLFQPFVQLDSG
LSRQHEGTGLGLVLVRRLVELHGGKVEVESMPGVGSRFTVTLPYQPVTHIAASSSADE
LPPVQLALIIEDSATTADQLARYLEELQIQPVICSYGKGAVEQVQALRPDLILLDVQM
PDRSGWEILADLRRDPDLRQVPVIIVSVVDEPERGLAAGAAAYLVKPINRLMLRRALS
QITVTKTTSSTAPRRPLSRRILLAEDNEVNRVTLSDYLVAQGYEVRVACQGKEALQIA
AEWRPDLIIMDIQMPGLDGLEVIQRLRADAAFAATPIIAVTALAMPGDRERCLSAGAN
DYFAKPIRLRQLVERIEQFLASSQHAI"
misc_feature complement(509002..509565)
/locus_tag="Caur_0402"
/note="CHASE domain; Region: CHASE; pfam03924"
/db_xref="CDD:202811"
misc_feature complement(508276..508692)
/locus_tag="Caur_0402"
/note="GAF domain; Region: GAF_2; pfam13185"
/db_xref="CDD:205366"
misc_feature complement(508276..508686)
/locus_tag="Caur_0402"
/note="GAF domain; Region: GAF; cl15785"
/db_xref="CDD:210185"
misc_feature complement(507091..508095)
/locus_tag="Caur_0402"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature complement(507589..507786)
/locus_tag="Caur_0402"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(507604..507606,507616..507618,
507625..507627,507637..507639,507646..507648,
507658..507660,507715..507717,507724..507726,
507736..507738,507745..507747,507757..507759,
507769..507771))
/locus_tag="Caur_0402"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(507751..507753)
/locus_tag="Caur_0402"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(507109..507426)
/locus_tag="Caur_0402"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(507121..507123,507127..507132,
507145..507147,507151..507153,507199..507210,
507289..507294,507298..507300,507304..507306,
507310..507312,507385..507387,507394..507396,
507406..507408))
/locus_tag="Caur_0402"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(507394..507396)
/locus_tag="Caur_0402"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(507202..507204,507208..507210,
507292..507294,507298..507300))
/locus_tag="Caur_0402"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature complement(506707..507039)
/locus_tag="Caur_0402"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(506716..507039)
/locus_tag="Caur_0402"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(order(506746..506751,506758..506760,
506806..506808,506872..506874,506896..506898,
507025..507030))
/locus_tag="Caur_0402"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(506896..506898)
/locus_tag="Caur_0402"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(506872..506880,506884..506889))
/locus_tag="Caur_0402"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(506743..506751)
/locus_tag="Caur_0402"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(506314..506652)
/locus_tag="Caur_0402"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(506305..506649)
/locus_tag="Caur_0402"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(506347..506352,506359..506361,
506416..506418,506482..506484,506506..506508,
506635..506640))
/locus_tag="Caur_0402"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(506506..506508)
/locus_tag="Caur_0402"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(506482..506490,506494..506499))
/locus_tag="Caur_0402"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(506344..506352)
/locus_tag="Caur_0402"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(510394..510882)
/locus_tag="Caur_0403"
/db_xref="GeneID:5827688"
CDS complement(510394..510882)
/locus_tag="Caur_0403"
/note="PFAM: flavin reductase domain protein FMN-binding;
KEGG: ttj:TTHB244 phenol hydroxylase component B"
/codon_start=1
/transl_table=11
/product="flavin reductase domain-containing protein"
/protein_id="YP_001634042.1"
/db_xref="GI:163845998"
/db_xref="InterPro:IPR002563"
/db_xref="GeneID:5827688"
/translation="MSIDPREYRSTIGLFATGVTVITASDGDHIRGMTANSLTSVSLD
PLLLLVCVDRKARMAPVISAASHFAVNILRADQEAIARHFAGRPQPDIEVALEELAGA
PVLSASLATLVCSRERILDGGDHLIVLGRVIALRRAAEGDPLLYFAGAYRQLAEMSTT
LA"
misc_feature complement(510430..510846)
/locus_tag="Caur_0403"
/note="Flavin reductase like domain; Region:
Flavin_Reduct; smart00903"
/db_xref="CDD:197971"
gene 511410..511865
/locus_tag="Caur_0404"
/db_xref="GeneID:5825759"
CDS 511410..511865
/locus_tag="Caur_0404"
/note="KEGG: rrs:RoseRS_1508 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634043.1"
/db_xref="GI:163845999"
/db_xref="GeneID:5825759"
/translation="MTITDRMLTGAIANNPGNYHGDGEWRYSITQRTIYFSKAAAPDP
RDQEPFFPLPSLNPDGSGRMERAFRQFIRRRWPPSRCTELEKFAERRGWHLAMELKYG
GGALEDHEAAEWQYVVNRELQRLAAEVRARIAELEQQATQSEPTPASGG"
gene complement(511828..512208)
/locus_tag="Caur_0405"
/db_xref="GeneID:5825760"
CDS complement(511828..512208)
/locus_tag="Caur_0405"
/note="KEGG: rca:Rcas_3946 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634044.1"
/db_xref="GI:163846000"
/db_xref="GeneID:5825760"
/translation="MNVKALQRGFWLSFWSVVIYMIVRGALIPARLRHPRITSLSGIE
PMYAMLSWGYGPGSRPVNVIFDVQFAGGAQGSVTVDGEALEAEVPLIGKAQPGESYTI
TATLVYRQLGRAFTRQMQVSAQIE"
gene complement(512205..512492)
/locus_tag="Caur_0406"
/db_xref="GeneID:5825761"
CDS complement(512205..512492)
/locus_tag="Caur_0406"
/note="PFAM: protein of unknown function UPF0044;
KEGG: mgm:Mmc1_3700 protein of unknown function UPF0044"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634045.1"
/db_xref="GI:163846001"
/db_xref="InterPro:IPR001890"
/db_xref="GeneID:5825761"
/translation="MKPAQRAYLRRLAHPLPVTVMIGKNGLTEGILAKIEQELNAHEL
IKVRFLDHKDMKQSLTETIVSETGADLVAIIGHTAILFRQHADPTQRKIQV"
misc_feature complement(512244..512492)
/locus_tag="Caur_0406"
/note="CRS1 / YhbY (CRM) domain; Region: CRS1_YhbY;
pfam01985"
/db_xref="CDD:190184"
gene complement(512489..513274)
/locus_tag="Caur_0407"
/db_xref="GeneID:5825762"
CDS complement(512489..513274)
/locus_tag="Caur_0407"
/note="PFAM: glycosyl transferase family 2;
KEGG: rca:Rcas_1701 glycosyl transferase family 2"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_001634046.1"
/db_xref="GI:163846002"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:5825762"
/translation="MTTNNEPFLSIVIPAYNEERRLPATLAAIKAFLVNEPYTAEVIV
VDDGSEDRTAEVAEAAGATVLRCEHRGKGFAVRTGALAARGDIILLCDADLATPIEEW
PRLRAAIERGYPIAIGSREGIGASREGEPWYRHVMGRVFNWIIRLVALRGINDTQCGF
KALRRAVARDLFQRVRIYGDDAPIVRGAAVTAYDVELLFLAQRRGYAICEIPVKWRYG
TETKVNPLRDSWRNLRDVLRVRINDLCGKYDVTSTPIEEVAPR"
misc_feature complement(512531..513250)
/locus_tag="Caur_0407"
/note="transferase 2, rSAM/selenodomain-associated;
Region: glyco_like_mftF; TIGR04283"
/db_xref="CDD:212006"
misc_feature complement(512609..513244)
/locus_tag="Caur_0407"
/note="DPG_synthase is involved in protein N-linked
glycosylation; Region: DPG_synthase; cd04188"
/db_xref="CDD:133031"
misc_feature complement(order(512993..512995,513227..513229,
513233..513235))
/locus_tag="Caur_0407"
/note="Ligand binding site; other site"
/db_xref="CDD:133031"
misc_feature complement(order(512993..512995,513227..513229,
513233..513235))
/locus_tag="Caur_0407"
/note="Ligand binding site; other site"
/db_xref="CDD:133031"
misc_feature complement(order(512993..512995,513227..513229,
513233..513235))
/locus_tag="Caur_0407"
/note="Ligand binding site; other site"
/db_xref="CDD:133031"
misc_feature complement(order(512993..512998,513134..513136))
/locus_tag="Caur_0407"
/note="Putative Catalytic site; other site"
/db_xref="CDD:133031"
misc_feature complement(512993..513001)
/locus_tag="Caur_0407"
/note="DXD motif; other site"
/db_xref="CDD:133031"
gene complement(513271..514233)
/locus_tag="Caur_0408"
/db_xref="GeneID:5825763"
CDS complement(513271..514233)
/locus_tag="Caur_0408"
/note="PFAM: glycosyl transferase family 2;
KEGG: rrs:RoseRS_1415 glycosyl transferase, family 2"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_001634047.1"
/db_xref="GI:163846003"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:5825763"
/translation="MIDVVVPNYNGSALLPTCLDSLRAQTRRDFTVTVVDDASTDDSV
ALITTRYPEVRVLRLPQNRGFAAAVNAAFAATREPFFVLLNNDTEADPNWLAALIGAL
ERWPQFAFAAAKLRLFDRRNIIHSAGDFYRPNGEPGNRGVWEEDRGQYDAFHEVFGPC
AGAAAYRRCALEQLAEDGRVFDEALVMYCEDVDLNLRARRKGLRTIFVPTAVVYHRLS
ASGGGVLASYYCGRNFPLVWVKNMPPVVQRRYWPALLVSQLRFALHSLRHFREPAARA
RLRGQLAGLRALPHFWSRRAFTPEEEAALVAAFELSQPPAQRFV"
misc_feature complement(513589..514230)
/locus_tag="Caur_0408"
/note="Glycosyltransferase like family 2; Region:
Glyco_tranf_2_3; pfam13641"
/db_xref="CDD:205818"
misc_feature complement(513586..514224)
/locus_tag="Caur_0408"
/note="Subfamily of Glycosyltransferase Family GT2 of
unknown function; Region: GT_2_like_c; cd04186"
/db_xref="CDD:133029"
misc_feature complement(order(513973..513978,514123..514125))
/locus_tag="Caur_0408"
/note="Probable Catalytic site; other site"
/db_xref="CDD:133029"
misc_feature complement(order(513655..513657,513661..513663,
513973..513975))
/locus_tag="Caur_0408"
/note="metal-binding site"
/db_xref="CDD:133029"
gene complement(514230..515084)
/locus_tag="Caur_0409"
/db_xref="GeneID:5825764"
CDS complement(514230..515084)
/locus_tag="Caur_0409"
/EC_number="1.1.1.133"
/note="PFAM: NAD-dependent epimerase/dehydratase; 3-beta
hydroxysteroid dehydrogenase/isomerase;
dTDP-4-dehydrorhamnose reductase; Male sterility domain;
KEGG: rca:Rcas_1699 dTDP-4-dehydrorhamnose reductase"
/codon_start=1
/transl_table=11
/product="dTDP-4-dehydrorhamnose reductase"
/protein_id="YP_001634048.1"
/db_xref="GI:163846004"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002225"
/db_xref="InterPro:IPR005913"
/db_xref="InterPro:IPR013120"
/db_xref="GeneID:5825764"
/translation="MRIAITGANGQLGRALIATLADQHTLVPLGHDQLELTDPVTVEQ
IAATDADVVIHAAAYTNVDGCARDPGLAYRVNGLGTRYVALGCRRIDAALVYISTNEV
FAGDARRPYFEDDPPRAINPYGQSKLAGEQAVRSLVARHFIVRVAWLFGGERNFVRTV
LRLAANPPAHGLRMVADEIGSPTYTFDVAAGLARLITTDYYGTYHFVNDGICSRYEFA
AEILRRVGLNIPLQPIRLCDFQRDSTPPPYTPLANLAGASLGITFRPWQDALADYLGR
LPNEVLPT"
misc_feature complement(514272..515081)
/locus_tag="Caur_0409"
/note="dTDP-6-deoxy-L-lyxo-4-hexulose reductase and
related proteins, extended (e) SDRs; Region:
dTDP_HR_like_SDR_e; cd05254"
/db_xref="CDD:187564"
misc_feature complement(514254..515078)
/locus_tag="Caur_0409"
/note="RmlD substrate binding domain; Region:
RmlD_sub_bind; pfam04321"
/db_xref="CDD:113104"
misc_feature complement(order(514638..514649,514704..514706,
514716..514718,514788..514796,514860..514862,
514905..514907,514911..514919,514974..514985,
514992..514997,515049..515060,515064..515066))
/locus_tag="Caur_0409"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187564"
misc_feature complement(order(514704..514706,514716..514718,
514788..514790,514857..514859))
/locus_tag="Caur_0409"
/note="active site"
/db_xref="CDD:187564"
misc_feature complement(order(514545..514547,514563..514565,
514605..514607,514641..514643,514716..514718,
514788..514790))
/locus_tag="Caur_0409"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:187564"
gene complement(515326..516807)
/locus_tag="Caur_0410"
/db_xref="GeneID:5825765"
CDS complement(515326..516807)
/locus_tag="Caur_0410"
/note="TIGRFAM: PAS sensor protein;
PFAM: response regulator receiver; ATP-binding region
ATPase domain protein; histidine kinase A domain protein;
PAS fold domain protein;
KEGG: rca:Rcas_3604 putative PAS/PAC sensor protein"
/codon_start=1
/transl_table=11
/product="PAS sensor protein"
/protein_id="YP_001634049.1"
/db_xref="GI:163846005"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:5825765"
/translation="MEQNTILIVDDDELMRSLLIEIITPFNLRLITAQRGDQALQLAQ
QHLPDLILLDVMLPDMNGFEVCQRLRDDPATAQIPIVMITALNDREAKIHGFEAGADE
FITKPFDPGELQARINTVLRLNRYRRLLQEQAKVNVERARFEWVIETSDNAYVIIDHD
DQIRYANRRARTYLGLTANEQPVRPFRELVTQRYRLVPPEAWEQWPIGAPELLYLVHP
ETSRSPEQWLQVEAARIHPSDDQIVVTLCDVTQQITLQRDMWTFHTAISHKLRTPLVS
YLGGLNLLYDNIEHMDRTMARNIAAIALSAAKRLQQVIDDIFLYVRSPGDIHYDNCTV
FDLPAMVSTLNQELEIPAISLSIDPVLDARRLRISRRSLEMVLRELCENARKFHPQQR
PMVTIRVDADLAQNQVRLVVCDDGVHLPPAHLQKIRQPYYQAERNFTGQVEGMGLGLA
QVARIILAVGGSYQMRNRSDRPGICVELRIPFVEEDSSDRVIG"
misc_feature complement(516454..516792)
/locus_tag="Caur_0410"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(516445..516789)
/locus_tag="Caur_0410"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(516487..516492,516499..516501,
516556..516558,516622..516624,516646..516648,
516775..516780))
/locus_tag="Caur_0410"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(516646..516648)
/locus_tag="Caur_0410"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(516622..516630,516634..516639))
/locus_tag="Caur_0410"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(516484..516492)
/locus_tag="Caur_0410"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(515440..516387)
/locus_tag="Caur_0410"
/note="phosphate regulon sensor kinase PhoR; Region:
phoR_proteo; TIGR02966"
/db_xref="CDD:163090"
misc_feature complement(516058..516360)
/locus_tag="Caur_0410"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cl02459"
/db_xref="CDD:207601"
misc_feature complement(order(516139..516141,516154..516156,
516232..516243,516280..516282,516298..516300,
516310..516312))
/locus_tag="Caur_0410"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature complement(order(516112..516114,516118..516120,
516202..516207,516214..516216,516238..516240,
516250..516252))
/locus_tag="Caur_0410"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature complement(515368..515691)
/locus_tag="Caur_0410"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(515380..515382,515386..515391,
515407..515409,515413..515415,515461..515472,
515551..515556,515560..515562,515566..515568,
515572..515574,515650..515652,515659..515661,
515671..515673))
/locus_tag="Caur_0410"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(515659..515661)
/locus_tag="Caur_0410"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(515464..515466,515470..515472,
515554..515556,515560..515562))
/locus_tag="Caur_0410"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(517036..517461)
/locus_tag="Caur_0411"
/db_xref="GeneID:5825766"
CDS complement(517036..517461)
/locus_tag="Caur_0411"
/note="KEGG: rrs:RoseRS_2524 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634050.1"
/db_xref="GI:163846006"
/db_xref="GeneID:5825766"
/translation="MYIRWVVRKHKNAEIANTNFYDAYLVESYRDERGQPRQRTVAYL
GNIRQINNEFPTIERELFLLRADRILDTLPELTESDRQEIREALRRKIPPLNRDEVIR
AFTANLTWYRQWWEQNGCPLTDDELLSIIRATRGGMEAV"
gene complement(518662..535179)
/locus_tag="Caur_0412"
/db_xref="GeneID:5825767"
CDS complement(518662..535179)
/locus_tag="Caur_0412"
/note="KEGG: ddi:DDBDRAFT_0184530 colossin A;
TIGRFAM: conserved repeat domain protein;
PFAM: protein of unknown function DUF11; Thrombospondin
type 3 repeat; Cna B domain protein;
SMART: Fibronectin type III domain protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634051.1"
/db_xref="GI:163846007"
/db_xref="InterPro:IPR001434"
/db_xref="InterPro:IPR002048"
/db_xref="InterPro:IPR003367"
/db_xref="InterPro:IPR003961"
/db_xref="InterPro:IPR008454"
/db_xref="GeneID:5825767"
/translation="MLRQNIVAARRTLLSLLLILTVVLAGLRPDVALANATTDVTLST
NFPVVNSGDWSVINVDYSCSSVLNTPCENATVTVVLPPTLAGGVGDVQALGAGTSPSY
NPATRTVTWTFNAPLAAGDSGRLELRVRFPAGSTPDGTTATLRAEMRSTTAPPDLSNP
LTITARAEPNAVATKTFVSGGAPDVPTTYQLQVCIPNNGSGALNLTNVQITDTLPTGV
TFVSASDGGTFNGATNTVTWPPTSLTVPGSLCATRTVTVIFPSATFTVGTEVRNVMDV
TAQAGSVTITLTDDDVRRIQPPTPGYGFTKNGPTTALVGDTVTYTFNTINTGTTPLND
VVVTDPVPPELQVTRITAAGGNIAGVRVELEYTTNLNPTFTAVPGSPFTTTSCVNIAP
NTGGGCTTLTLGAGEQITAIRWRYLDPLPFGFSATGHNFSAVVTASPINGVVVNQATS
TFTYNGFTATRTDEARTRIIEPGARAEVAKSVSPAVAYAGDTVIYTITLANTAVGSPA
AALINPMLADLLVPALIYVPGSATVVSRPAGAPDPVLEVIEDFNGTGRTLLRWRWDSY
SLPPNASFTLRFEARIDPATQAGTINNTASLASFANPAGEIFIDRCSQQNPDSNDFDG
DGNITELLCSSSITSLSLAAAANASSAKWVLGQLDTEWTRDPDTGLTTPGGMADYRLI
ITNTNSVPLTNLVLIDILPWVGDVGVVRFNDPRDSQWQPYLAGPIVVPDGATVYYSTT
NNPCRNPDLGLTDANGDPIDAPGCVDPQWSTVLPSDITTVRSVRIDFGSRVLYPQDSI
VITWPMRAPLGGTPGEIAWNTFGYRAFDINGNPLLAAEPPRVGIERGPVIPPSYGNYV
WLDANLNGVQDTGEVGVNGARIDFYQDSDGVAGPSTGDRWVGFTISGPDNDGNPGYYL
FSDPTDIPPGDYYIRVTPPAGYSLTTPDQGGDDSRDSDINLTTRYSAVTTLISGENDD
TWDVGLINDTAVGNYVWIDRNGNGVQDEPSGDGVNGITVRLYTASGTLVDTTVTADDL
LGNPGYYLFSGLSAGNYYVEFVLPAGLNFTTADSGSNDQLDSDANPTTGRTDVFTLVT
NQFDRSRDAGLLVPAGTLALGNRVWHDRDNDGRYEPLNGEAGINGVRLSLFRDVNSNG
QPDAGEYVGSSTTATVSGEAGYYQFTNLVAGDYIVVIDDDNFAPGGALFGMRSSSGND
PAPDPDTNVDHDDNGALFGATVRSQPITLTINGEPTDDGDGTNGNQTLDFGFVNGAAL
GDRVWFDTNSNGIQDAGEPGVAGVTVELLDGSGNPIDSDPTTSGVQPTITVTDGVGRY
GFSGLAAGTYQVRFSNLPAGYSFTTADQGANNDLDSDVNNAGLTPVITLAANQTDLSW
DAGLVATPASLGDRVWNDLDYDGIQDAGEPGVSGVQVQLYRPGYDNVAGTTDDELVAT
TTTDSNGNYGFTNLPPGRYFVAFGSPPAGFAVSPTDQGSDDTVDSDADLTTRRTAIIE
LTPGENDPNWDMGLFVFASIGDRVWSDTNNNGIQDTGEPGVGGVQVRLYRPGSSVPVA
TTTTNSSGFYSFTNLIPADYYVEFSLPGGYRASPQNQGSDDTLDSDADPITRQTATTT
LDPGENDPTWDFGIVPTASIGDRVWLDLNANGIQDASETTGVPGVQVVLYDSAGNPLN
TTVTDVDGFYRFENLLAGDYYLRFVVPASFIISPQDQGGNDNADSDADPTTFLTVATT
LSAGENDLRWDLGLYQLASIGDRVWHDINGNGRQDGGEPGVANVPVELYQPGNDGQAG
TADDVLVASATTDGIGEYLFSNLQPGRYFVAFGAASGYSLLSPRDAVVATDETDSDVD
ANRRTPIVELLSSTSNRTLDMGVLNPASLGNRVWFDADVDGVQDPGESGVSGVTVRLF
ALDGTLVATQTTDANGEYLFTNLSPGEYYVVFSNLPANRSFTRVDQGGDDTADSDANP
LDGRTGIVRLNSGDANLTVDAGIFETITVGDRVWLDRDADGVQDIDETTGIPGVRVEL
LRDSDGTVLDYTFTDSNGLYQFTNLFPGTYRIRFSEIPTGYLRSPQDQGSDDQLDSDA
NSSFETAPFTPVSGNNPQYDLGLYQPAEIGNFVWEDRNGNGRQDAGEPVLANVTVTLN
GTTGAGDPVSLTTQTDSNGIYLFANLVPGTYTVSVSAPAGYVFTAANQGDDTGDSDTN
ASGVMATTTLESGESDLSWDAGLYRPASIGNFVWRDTNGNGVQDSGESGIDGVTVTLT
GTTGSGSPVSLTITTGGGGIYSFTNLAPGSYQITVTAPTGERFTYRDITATEVAGATD
NNDSDADNAGAMIATTLDSGESDLSWDAGLVIPASLGDFVWEDLDGDGVQETGEPGFA
NVTVELIGAGRDRTFGTADDTLATTTTNGSSGYGFTDLQPGLYRVRFTRPNGYGFTVG
DATAATDATDSDVPTGTAATATTTTIDLESGENDPTWDAGLYQLLSLGNRVWEDTDNN
GQINGSETGINGVTVRLYRDLNGDGDVSDSGETTPVATTTTANGGYYLFSGLVQGNYL
VEVVLPAGYVSSTGTNGSATGAYEPAPDADTNTTDSDDNGTRSGGVVRSTIVRLAPNS
EPTAESDPLPGSITDPARNENSNLTVDFGLFRPASIGNLVWFDRDADGVQDGGDETGI
GGVTVRLYDASNTLIATTTTAADGSYGFDYLIPGNYYLVFDLPTDYVRSPQDQGGNDT
ADSDPDRTSGQTIVTNLVAGESDLSWDAGLYQRVNLGNQVWNDVNNNGLLDSGESGID
GVVVDLYYDADRNGIIDGSEETPIATTTSAGGGFYNFTDLDPGNYLVEIPASNFAGGT
ALGPSGNQPAFRSSTGTNGSATGPYEAAPDPDNNVDNDDNGTTDGSGAVRSALITLRS
QDEPTGDGDGNNGNLTVDFGFFRPLTLGNLVWHDVNNNGQRDSGEAGIDGVTVQLYRD
TNANGSYDAGTDTLVATTTTGGGGDYRFTDLVPGDYLVVIPASNFGTGGALRFYRSSD
NGNATDTANDPDGDIDNDDNGIGPNVGVVTGAATDLVRSTAVTLGLDGEPTGEDGDSN
TNLTVDFGFYSLTIGNRVWIDLNNNGVFDAGDINGGYANGRTVNLLYDANNDGVISGS
ETTAVATITTSNGGRYLFGGLRDGGNYAVEVVSDASNVSSTGVNGSASGPYEPGLDPD
SSTVDNDDNGTATGNNERSPVFTVRVGLMPTGEPDAVMPAGVTNPAADANSNLTIDFG
LFDDARIGDQVWLDVNGNGIRETGETTYIAGVTITIYNATTGQPLDGDPNTPGIQPIT
RTSVAAATSYLFDRLIAGTYYLAFSDIPAQYAISPLGQGGDNTVDSDVDPSSLRTANI
VLTNNNDLSWDLGLYPRLTLGSLVWYDSNDNGLVDGGESGISGVQVDLYRDSNNNGQP
DAGEFVASTTTDATGNYSFTGLEQGNYIVVIPDSNFAIGQPLYRHRSSTGSNGAATGP
YEPAGDPDNNSDNDDNGTDTSNGVVSGVISLNPSVEPTTDGDGANGNLTLDFGFFEPL
TLGNLVWHDVNNNGQRDSGEAGIDGVRIELYLDSNGNNQVDAGEFVAFTTTASGGLYT
FSDLIEGNYIVRIPASQFGAGQPLAGFVSSTGTNGSATGSYEPAPDPDSNIDNDDNGT
TSGSGNVDSAPVTLARSTEPTTDGDGDNGNLTVDFGFFRHARLGDRVWHDQDADGIQD
TGESGIGGVSVQLFSAGPDNAIGGGDDALVATTSTDGSGVYGFSHLLPGNYYLIFAQP
TGYSDVSPQDQGSDNAADSDVDPVTRQTPLITLAAGDNDPSWDMGVFNRVSIGNFVWE
DTDGDGVQDSGEPGVANVTVLLNGTTGAGTVVNLTTTTDSNGFYRFNNLAPGTYTVTV
QLPTGYAFTAANQGSDDGLDSDADPTTGAMSATVLTSGEVDLTWDAGLYRPASVGDRV
WLDSNGNGLQDTGESGIQSVAVAIYSVGPDGVIGGGDDVFVAATSTDSSGNYSFSGLR
PGSYYLLFNLPAGYNISPQDQGSDNTIDSDVNPISRQTTVITLASGDNDPTWDMGLYQ
PASVGNVVWHDVNGNGVQDTGESGIGNVTVTLYRADGSMVGSTTTAADGSYSFTNLPP
GEYYLVFSNLPSGYVFTAADQGGDDAADSDASQSTGQTATFTLVSGQVDERWDAGAYQ
PASIGNFVWEDTDGDGVQDGTESGVANVTVRLNGTTGAGAAVTLTAITDSDGFYRFDN
LAPGTYTVMVQASAGYAVTATDQGGDDARDSDADPNTGVMSATELESGEVDLTWDAGL
YRPASIGDRVWRDTNGNGIQDSGEPGVANVTVQLSGTTGAGAVVAQTTTTDGDGLYRF
TNLAPGTYTITVTAPAGDGFTAADQGGDDSRDSDANSSGVMSATTLVSGEEDVSWDAG
LFGAASIGNFVWEDINGNGVQDAGEPGIEGVEVQLTGTTGIGTVVNLTTTTDSDGFYR
FDNLAPGTYTVAVQSPGGYVFTTDNQGSDDARDSDANPATGEMSATVLESGEVDLIWD
AGLYRPASIGNFVWEDTDGDGVQDTGESGIGNVTVTLYRADGSPVGSTTTAADGSYSF
TNLPPGEYYLVFSNLPSGYVFTAADQGGDDAADSDASQSTGQTTTFTLVSGQVDERWD
AGVYQLTSVGDLVWLDRNGNGVQDVGESGIENVTVTLYRADGSTVGSTTTAADGSYSF
TNLPPGEYRLRFTDIPSGLTFSPADSSGDDTTDSDVTATNGETDVFALLSGQSDTNRD
AGVYPLLSLGNLVWEDTNNNGVVDSGESGVGGVQVRLYRDSNSNGTWDASDQEVASTV
TDGNGVYRFTNLPQGDYIVVLPGRQFEADSPWFNYRSSTGARSLSGGPYEPGVAANGD
LDNDDNGTRQSDVDSSFNIVSSLITLRPDGEPDTAVDGDDRNSNLTVDFGIFRPATVG
DLVWNDLNGNGIYESTEPGVANVLVTLYDVGDDGIAGTSDDVMVATQRTDDDGFYLFE
NVPPGDYYLVFSDLSGGARFTYPDRGGDDASDSDADPGNGATTTFTLQSGSENLDWDT
GLILPASIGNLVWEDRNGNGVQDGGESGIAGVTVRLTGTDSDGNSVDVSVVTDIDGVY
RFENLLPGNYTITVAPPAGYVFTAADQGSNDALDSDADPNTGAMNATVLESGEVDLSW
DAGLYRPASIGNFVWEDTDGDGVQDGTESGVANVTVLLNGTTGAGTVVNLTATTDSNG
FYRFDDLAPGTYTVTVQVPAGYVVTVANQGSNNALDSDADPDTGAMNATVLESGEVDL
TWDAGIFLPATLGNRVWHDINANGIADSGETGVSGITVSLYRADGTLVQTVVTDSNGA
YLFTNLPPGDYYLTFSLPNGWVFSPSGQGGDSGRDSDVDPDTQRTQVFTLGYGQTDLS
WWAGIHQPAPPTAITLLSFTAERQANGVLLRWVTGSERDTLGFLLLRSSTGNRADATP
ILSTPIPAQGSAGSGASYQWFDRTAQPNVSYHYWLVEVEVDGDRHEFMLSSPAVQFTY
RVLVPIIQR"
sig_peptide complement(535102..535179)
/locus_tag="Caur_0412"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.957) with cleavage site probability 0.468 at
residue 26"
misc_feature complement(533575..533742)
/locus_tag="Caur_0412"
/note="Domain of unknown function DUF11; Region: DUF11;
cl15273"
/db_xref="CDD:213134"
misc_feature complement(531106..531333)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(530722..530952)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(530386..530577)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(530026..530226)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(529654..529881)
/locus_tag="Caur_0412"
/note="Peptidase associated domain: C-terminal domain of
M14 N/E carboxypeptidase; putative folding, regulation, or
interaction domain; Region: Peptidase_M14NE-CP-C_like;
cl01383"
/db_xref="CDD:211449"
misc_feature complement(529315..529506)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(<529009..529155)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(528610..528810)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(527032..527220)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(<524866..525009)
/locus_tag="Caur_0412"
/note="Peptidase associated domain: C-terminal domain of
M14 N/E carboxypeptidase; putative folding, regulation, or
interaction domain; Region: Peptidase_M14NE-CP-C_like;
cl01383"
/db_xref="CDD:211449"
misc_feature complement(523486..523695)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(523123..>523260)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(<522820..522969)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(522412..>522555)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(521719..521916)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(<521413..521562)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(<521065..521214)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(<520222..520374)
/locus_tag="Caur_0412"
/note="Peptidase associated domain: C-terminal domain of
M14 N/E carboxypeptidase; putative folding, regulation, or
interaction domain; Region: Peptidase_M14NE-CP-C_like;
cl01383"
/db_xref="CDD:211449"
misc_feature complement(519790..>519921)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(519448..519645)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
misc_feature complement(<519145..519291)
/locus_tag="Caur_0412"
/note="Cna protein B-type domain; Region: Cna_B;
pfam05738"
/db_xref="CDD:191360"
gene 536993..538351
/locus_tag="Caur_0413"
/db_xref="GeneID:5825768"
CDS 536993..538351
/locus_tag="Caur_0413"
/note="PFAM: PUCC protein; major facilitator superfamily
MFS_1;
KEGG: rrs:RoseRS_1912 PucC protein"
/codon_start=1
/transl_table=11
/product="PUCC protein"
/protein_id="YP_001634052.1"
/db_xref="GI:163846008"
/db_xref="InterPro:IPR004896"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:5825768"
/translation="MGLLRFAVKTFRLSLMRVGAGWMFALLTFNFNRVSISDLGAMAV
IVTTLIGLHHFISFFQVYWGRFTDRYPIFGLRRTPYVILSNVGAALIFLALPSIAVGL
GERSIIATIEAFALIFLFGVLMAMNGSSSNALIAEVTTPKERGAVVAFIWATVIISGI
VSAGISRVIMPVYSPEAMQQLYNLTPIIVTVTVLLGVIGLEKPISKEEHRKLLEQAPE
KGEAGPLETWRVATGLMKRNPQVRGFFAFVLLAILGIFLQDAILEPFGAEVFGMPQKD
TAAFQQAWGAGALLGMLGIGILSSIFPIQKKTIATLGGLGVAGGLAMLMISALTLHRE
IISPALLIMGLGIGLFNVGALAMMMEMTVEGQTGLYMGMWGMAQGLGNGFANVISGLG
HTVMIEGGLVTPSVGYGLVFGLEALLMVLAIGILRGISVQEFKGLTRQEITTALAMDA
AS"
misc_feature 537086..538297
/locus_tag="Caur_0413"
/note="PUCC protein; Region: PUCC; pfam03209"
/db_xref="CDD:112041"
gene 538382..539203
/locus_tag="Caur_0414"
/db_xref="GeneID:5825769"
CDS 538382..539203
/locus_tag="Caur_0414"
/note="PFAM: Methyltransferase type 11; Methyltransferase
type 12;
KEGG: rca:Rcas_1535 methyltransferase type 11"
/codon_start=1
/transl_table=11
/product="type 11 methyltransferase"
/protein_id="YP_001634053.1"
/db_xref="GI:163846009"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:5825769"
/translation="MPLPITFDQIADVYDAQRAHPAEVSTAIGQAIVDQAGSGARVLE
IGIGSGRIALPVAAAGATVIGIDISAGMLHVAHRRAEETGTPLHLVQADAQYLPFATA
TFDAVLAVHVLHLLPNWRAGLAEMVRVTRPGGVIIQGVDWRDPASCVGLLRGQLRQTV
MDLLPGARPPGAGAAVSQHLAKLGAPVVEEGIVAARWHRTLSPAEVIAGMAARSDAET
WALSDEVLQTAIERVQGWAAQQWPDLNERQEVEHRFLLTVSRVSTAPANDQRGGR"
misc_feature <538382..>538585
/locus_tag="Caur_0414"
/note="Medium chain reductase/dehydrogenase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR; cl16912"
/db_xref="CDD:211475"
misc_feature 538502..538792
/locus_tag="Caur_0414"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(538514..538534,538580..538585,538655..538663,
538709..538711)
/locus_tag="Caur_0414"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 539203..539691
/locus_tag="Caur_0415"
/db_xref="GeneID:5825770"
CDS 539203..539691
/locus_tag="Caur_0415"
/note="PFAM: 2-vinyl bacteriochlorophyllide hydratase;
KEGG: rca:Rcas_3748 2-vinyl bacteriochlorophyllide
hydratase"
/codon_start=1
/transl_table=11
/product="2-oxoglutarate synthase subunit,
2-oxoacid-ferredoxin oxidoreductase subunit CD"
/protein_id="YP_001634054.1"
/db_xref="GI:163846010"
/db_xref="InterPro:IPR009905"
/db_xref="GeneID:5825770"
/translation="MYTPEQLERRNRSPWTKAQFILAPIQFIVFIISFALVIRYLATG
EGYWVATVSVWIKIALIWALTITGMLWEHDIYGKYFMAREFFWEDLGNLIAILTHNAY
FVAVWLHLDSRTIMWVMVFAYVTYLFNAGQFLWRGIRSAKERRLLQAQLQAQSAGMAK
PS"
misc_feature 539206..539625
/locus_tag="Caur_0415"
/note="2-vinyl bacteriochlorophyllide hydratase (BCHF);
Region: BCHF; pfam07284"
/db_xref="CDD:148725"
gene 539752..540741
/locus_tag="Caur_0416"
/db_xref="GeneID:5825771"
CDS 539752..540741
/locus_tag="Caur_0416"
/note="PFAM: Alcohol dehydrogenase zinc-binding domain
protein; Alcohol dehydrogenase GroES domain protein;
KEGG: rrs:RoseRS_3261 alcohol dehydrogenase, zinc-binding
domain protein"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase"
/protein_id="YP_001634055.1"
/db_xref="GI:163846011"
/db_xref="InterPro:IPR011597"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:5825771"
/translation="MPIKSRAVVIPKRNTIEIRTVQVNEPKAGDVLIKTAFTSISAGT
ERMLLDGRLPQPQLLFPVVPGYETVGQVVQVGSKAPKELLGQWVYIGGARCFRGVNAA
WGGQSEYITAEHERVVPLGSLDPATGVLLALAATALHGIKIGQIRRSDRVLVLGQGIV
GQLAARLAKYAGAQHVAVADRVAVRLQASQADQVIDVTRESLDEAIGEAKVDVLIEAT
GSMGALSGALPLLANHGRVVLLGYYDHINIPYAPVFMREAQILVAREWEFGPDGDLPR
VRDLLANGDLKVDGLLTHHVPLDRIQAAYRLALEDPACLKVVVTWPQNGTDAA"
misc_feature 539761..540708
/locus_tag="Caur_0416"
/note="2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A
dehydrogenase; Region: bchC; TIGR01202"
/db_xref="CDD:130269"
misc_feature 539839..540708
/locus_tag="Caur_0416"
/note="2-desacetyl-2-hydroxyethyl bacteriochlorophyllide
and other MDR family members; Region:
2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_;
cd08255"
/db_xref="CDD:176217"
misc_feature order(539872..539874,539878..539883,539890..539892,
540145..540147,540157..540159,540217..540234,
540289..540294,540304..540306,540349..540351,
540400..540405,540409..540411,540469..540474,
540520..540528)
/locus_tag="Caur_0416"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176217"
gene 540839..542029
/locus_tag="Caur_0417"
/db_xref="GeneID:5825772"
CDS 540839..542029
/locus_tag="Caur_0417"
/EC_number="1.18.6.1"
/note="KEGG: rca:Rcas_3746 chlorophyllide reductase iron
protein subunit X;
TIGRFAM: chlorophyllide reductase iron protein subunit X;
PFAM: NifH/frxC-family protein"
/codon_start=1
/transl_table=11
/product="chlorophyllide reductase iron protein subunit X"
/protein_id="YP_001634056.1"
/db_xref="GI:163846012"
/db_xref="InterPro:IPR000392"
/db_xref="InterPro:IPR010246"
/db_xref="GeneID:5825772"
/translation="MLAVYGKGGMGKSFFTTNLVSKLALLGNRVLQLGCDPKHDSCNA
LFGGISLPTLGDVWREFKEAGREEELAAHHVIFKTTIMNGAATVYGCEIGGPEVGRGC
GGRGITFGFDMLEKFGLSQWALDYVVMDFLGDVVCGGFATPLSRSLAEEVIILCGNDR
QSLYAANNIASAAKYFASMGGRTKLLGLVVNRDDGSGVAARFAEKINLPVLASIPLDR
KVRELADACQLALQEPRFDALFDRLARQIIDRTLPTVKMEEVQPLPYKEFLSVFGAEE
PDITPTGATAEELFGDHQVRQPAPVITLGLMERAVGEKPEMDAPTRLVVTRLLKELGM
YVTEANHDPKKGMTLTIDGHTTVCIGNTDDLDSKIAILAALQRSGEPFRYVDLRRPAS
PFYR"
misc_feature 540839..541735
/locus_tag="Caur_0417"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 540839..541702
/locus_tag="Caur_0417"
/note="chlorophyllide reductase iron protein subunit X;
Region: BchX; TIGR02016"
/db_xref="CDD:162661"
misc_feature <541769..542002
/locus_tag="Caur_0417"
/note="Cell division protein FtsQ; Region: FtsQ;
pfam03799"
/db_xref="CDD:202772"
gene 542161..542988
/locus_tag="Caur_0418"
/db_xref="GeneID:5825773"
CDS 542161..542988
/locus_tag="Caur_0418"
/note="PFAM: protein of unknown function DUF169;
KEGG: rrs:RoseRS_3259 protein of unknown function DUF169"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634057.1"
/db_xref="GI:163846013"
/db_xref="InterPro:IPR003748"
/db_xref="GeneID:5825773"
/translation="MALGPNCGGTERGKPRFTKPVVEALMSENDEIPDLKLLNRLLVE
RMRVKRRPVAITYCYDGPPPGYEPVNVVACAIVREAEQGRRVYVDANHHDCWVGQYHL
GFNPDPGPYITQGIYLTDAQGFYTPEAAACNKQQSYSLPAGMIKALAAAPLDDVPDGV
PVDLMVCVVDPQRAMQIAGAASVRIGTFPVGELGASACASIFAAPWHTKNSVFAIGDG
GGRMHNRLDPSEMFVSIPRSHLRYVVELIENFRIDPQKMREVIMPSYAAKAQQSREE"
misc_feature 542278..542895
/locus_tag="Caur_0418"
/note="Uncharacterized ArCR, COG2043; Region: DUF169;
pfam02596"
/db_xref="CDD:190358"
gene 543327..544439
/locus_tag="Caur_0419"
/db_xref="GeneID:5825774"
CDS 543327..544439
/locus_tag="Caur_0419"
/EC_number="6.6.1.1"
/note="KEGG: rca:Rcas_1544 magnesium chelatase ATPase
subunit I;
TIGRFAM: magnesium chelatase ATPase subunit I;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="magnesium chelatase ATPase subunit I"
/protein_id="YP_001634058.1"
/db_xref="GI:163846014"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011775"
/db_xref="GeneID:5825774"
/translation="MSKEHVQTIATDDVSKNGHTPPTNASTPPYPFVAIVGQAELKLA
LLLCVVNPTIGGVMVMGHRGTAKSTAVRALAAMLPPIKAVAGCPYSCAPDRTAGLCDQ
CRALEQQSGKTKKPAVINIPVPVVDLPLGATEDRVCGTLDIERALTQGVQAFAPGLLA
RANRGFLYIDEVNLLEDHLVDVLLDVAASGVNVVEREGVSVRHPARFVLVGSGNPEEG
DLRPQLLDRFGLHARITTITDVSERVEIVKRRREYDADPFAFVEKWAKETQKLQRKIK
QAQRRLPEVILPDPVLYKIAELCVKLEVDGHRGELTLARAATALAALEGRNEVTVQDV
RRIAVLALRHRLRKDPLETQDDAVRIERAVEEVLVP"
misc_feature 543414..544433
/locus_tag="Caur_0419"
/note="magnesium chelatase ATPase subunit I; Region:
BchI-ChlI; TIGR02030"
/db_xref="CDD:131085"
gene 544494..546398
/locus_tag="Caur_0420"
/db_xref="GeneID:5824720"
CDS 544494..546398
/locus_tag="Caur_0420"
/EC_number="6.6.1.1"
/note="KEGG: rca:Rcas_2540 magnesium chelatase ATPase
subunit D;
TIGRFAM: magnesium chelatase ATPase subunit D;
PFAM: von Willebrand factor type A; ATPase associated with
various cellular activities AAA_5;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="magnesium chelatase ATPase subunit D"
/protein_id="YP_001634059.1"
/db_xref="GI:163846015"
/db_xref="InterPro:IPR002035"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011704"
/db_xref="InterPro:IPR011776"
/db_xref="GeneID:5824720"
/translation="MVQKAIALPAAPLPFTAIVGLDTARQALLLLAVDPSLAGVAIGA
GAGTGKSALVRAFARMLAGGREFDPTIPWQLVEMPVGVSEDRLLGGIDIEATLATGER
VHRSGLLARANGGMLYVDSVNLLDDSTINHILSALDSGVVRVEREGISVVEPARFVLL
VTYDPAEGPPRRHLLDRLGLIVAPIGKAPVTTRAEVVRRNLQPGTDYEDDEALVLAGI
LAARELLPSVTISDEQVQQLSLTAMALGIEGHRADLFAVRAARAAAALAGREEVNNDD
LELAVRLVMLPRATRLPEMTPEEAGPPPPPEPAPPPPSPENSDDEQRDDEEEKPPQPP
EDELTIEELILAAMETDVPPDILETPFTVRRRGRSGSRGTISGQRGRHIRSVPGKPAQ
GRLDVIATLRAAAPWQRIRAAEYHPHRRGRIHLRADDLHIKKYRSKAGTLFCFLVDAS
GSMALHRMRQAKGAVNALLQQAYVHRDQVALLAFRGERADLLLPPSQSVELAKRALDV
LPTGGGTPLAAALLAAYQISEQARSRGIFRTTIVLITDGRPNVPLKADPTMDKARRLE
QARQEVQQLAGRLRAAGVGAVVIDTQRSFVSRGEAQQLAAWLGGRYVYLPNGRGDQIA
NAVIAASEEG"
misc_feature 544548..545039
/locus_tag="Caur_0420"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 544557..546365
/locus_tag="Caur_0420"
/note="magnesium chelatase ATPase subunit D; Region:
BchD-ChlD; TIGR02031"
/db_xref="CDD:162667"
misc_feature 544623..544646
/locus_tag="Caur_0420"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(544626..544649,544851..544853,544980..544982)
/locus_tag="Caur_0420"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 544839..544856
/locus_tag="Caur_0420"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 545022..545024
/locus_tag="Caur_0420"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 545814..546380
/locus_tag="Caur_0420"
/note="Magnesium chelatase: Mg-chelatase catalyses the
insertion of Mg into protoporphyrin IX (Proto). In
chlorophyll biosynthesis, insertion of Mg2+ into
protoporphyrin IX is catalysed by magnesium chelatase in
an ATP-dependent reaction. Magnesium chelatase is...;
Region: vWA_Magnesium_chelatase; cd01451"
/db_xref="CDD:29224"
misc_feature order(545835..545837,545841..545843,545847..545849,
546036..546038,546129..546131)
/locus_tag="Caur_0420"
/note="metal ion-dependent adhesion site (MIDAS); other
site"
/db_xref="CDD:29224"
gene 547601..549094
/locus_tag="Caur_0421"
/db_xref="GeneID:5824721"
CDS 547601..549094
/locus_tag="Caur_0421"
/note="PFAM: AAA ATPase central domain protein;
SMART: AAA ATPase;
KEGG: rrs:RoseRS_3807 AAA ATPase, central domain protein"
/codon_start=1
/transl_table=11
/product="recombination factor protein RarA"
/protein_id="YP_001634060.1"
/db_xref="GI:163846016"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR003959"
/db_xref="GeneID:5824721"
/translation="MPPKPRGTTLFDAQRQQALQQQAPLAARMRPRTLEEFVGQHHLV
GEGKLLRRAIANDQLFSLILWGPPGSGKTTLAQIIAHSTKAHFEPISAVSAGVNDLRR
VVQEAQDRLGMFQQRTVVFIDEIHRFNKSQQDAILPYVEDGTIILIGATTENPSFEVN
SALLSRARVFKLEALTDEEIGVLIDRALTDRERGLGDLKIMLARDARDYLVNMANGDA
RTALNALEAAARSKPPAIGETRLITVDDIRDALQSRAVRYDKHGELHYDAISALHKSV
RDSDPDGALYWLGRMLDGGEDPLYIARRLVRIAVEDIGLADPQALPQTIAAQQAVHFL
GQPEGELALAQAVVYLCLAPKSNALYRAYGAVQRDVAETRNEPVPLHLRNAPTQLMKR
LGYGKGYEYAHDLPEGRSDQEHLPPNLAGRIYYEPTGRGFEAEARERLAWREKRRLQT
PPTPPPVSEPAPGEESQLPPDELAPGEEPQLPPAASASRRREKRGKV"
misc_feature 547697..548896
/locus_tag="Caur_0421"
/note="recombination factor protein RarA; Reviewed;
Region: PRK13342"
/db_xref="CDD:183986"
misc_feature 547712..548098
/locus_tag="Caur_0421"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 547796..547819
/locus_tag="Caur_0421"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(547799..547822,547967..547969,548054..548056)
/locus_tag="Caur_0421"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 547955..547972
/locus_tag="Caur_0421"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 548096..548098
/locus_tag="Caur_0421"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 548435..548896
/locus_tag="Caur_0421"
/note="MgsA AAA+ ATPase C terminal; Region: MgsA_C;
pfam12002"
/db_xref="CDD:192911"
gene 549171..550328
/locus_tag="Caur_0422"
/db_xref="GeneID:5824722"
CDS 549171..550328
/locus_tag="Caur_0422"
/note="PFAM: monooxygenase FAD-binding; FAD dependent
oxidoreductase;
KEGG: rca:Rcas_1073 FAD dependent oxidoreductase"
/codon_start=1
/transl_table=11
/product="FAD dependent oxidoreductase"
/protein_id="YP_001634061.1"
/db_xref="GI:163846017"
/db_xref="InterPro:IPR002938"
/db_xref="InterPro:IPR006076"
/db_xref="GeneID:5824722"
/translation="MIERAQVVIIGAGVIGASIAFHLAERGLRDVIILEREETEISGS
TARSAAGVRHQFSSRTNVLLSRYSIERLRHFEEEVGGHAELRQVGYLFLINDEQTWAQ
YMRNVAMQRELGVRVEVLTPAEAARFIPQMRTDDLIGATFGPDDGYCDPYGIALGYLR
AAQRHGVRLYRGRPVTGFHIQGGRVTAVETPAGTVGCEFVINCAGPWAGEVAALAGLD
LPVRPYRRNVYMTTPFPAISAPIPLTIDVGSGFYMRREGQSILMGRSNPNEPSSTNTN
VDWDWLEAVIEAGIHRFPILETAGLAEQQCWAGLYEITPDHNPILGRHPDLAGYIDAS
GFSGHGIMHAPATGLLIAEEVIDGRAHTINIDELRIDRFRSGHLASEFNVI"
misc_feature 549231..550289
/locus_tag="Caur_0422"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 549234..550079
/locus_tag="Caur_0422"
/note="FAD dependent oxidoreductase; Region: DAO;
pfam01266"
/db_xref="CDD:201696"
gene 550343..550588
/locus_tag="Caur_0423"
/db_xref="GeneID:5824723"
CDS 550343..550588
/locus_tag="Caur_0423"
/note="KEGG: rrs:RoseRS_1296 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_001634062.1"
/db_xref="GI:163846018"
/db_xref="GeneID:5824723"
/translation="MTLDEAIAEIKRRIAEVSPSAVTRVTRVSAEEASIRAYAPAADE
QAIKNATNEFTLSLLTNEGLEVQVLVYDITTSLPPEE"
gene complement(551032..551799)
/locus_tag="Caur_0424"
/db_xref="GeneID:5824724"
CDS complement(551032..551799)
/locus_tag="Caur_0424"
/note="PFAM: ABC transporter related;
SMART: AAA ATPase;
KEGG: rca:Rcas_0668 ABC transporter related"
/codon_start=1
/transl_table=11
/product="ABC transporter-like protein"
/protein_id="YP_001634063.1"
/db_xref="GI:163846019"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:5824724"
/translation="MATLEIRAIRKTFTTPTGPVVVLDGLNMQVAAGEFVAVIGPSGS
GKTTLFNIIAGLETPDAGAVVIDGNDVTGCRGQVAYMPQRDALLPWLSVVENAVLATV
VQGGDVAAARREARALLADFGLQGWGDARPAMLSGGMRQRAAFLRTVLWHRPVMLLDE
PFGALDALTRAQLQQWLLSLWDRLDRTVLLVTHDIDEAIILADRIYVLTPRPARIALE
VRVELPRPRSYALVTDQAFARLKRQLQAVLMEGERYA"
misc_feature complement(551035..551799)
/locus_tag="Caur_0424"
/note="ABC-type nitrate/sulfonate/bicarbonate transport
system, ATPase component [Inorganic ion transport and
metabolism]; Region: TauB; COG1116"
/db_xref="CDD:31313"
misc_feature complement(551131..551790)
/locus_tag="Caur_0424"
/note="NrtD and SsuB are the ATP-binding subunits of the
bacterial ABC-type nitrate and sulfonate transport
systems, respectively. ABC transporters are a larg 