LOCUS NC_011252 22945 bp DNA linear CON 28-DEC-2022
DEFINITION Borrelia recurrentis A1 plasmid pl23, complete sequence.
ACCESSION NC_011252
VERSION NC_011252.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN02603586
Assembly: GCF_000019705.1
KEYWORDS RefSeq.
SOURCE Borrelia recurrentis A1
ORGANISM Borrelia recurrentis A1
Bacteria; Spirochaetota; Spirochaetia; Spirochaetales;
Borreliaceae; Borrelia.
REFERENCE 1 (bases 1 to 22945)
AUTHORS Lescot,M., Audic,S., Robert,C., Nguyen,T., Blanc,g., Cutler,S.J.,
Wincker,P., Couloux,A., Claverie,J.-M., Raoult,D. and Drancourt,M.
TITLE The genome of Borrelia recurrentis, the agent of deadly louse-borne
relapsing fever, is a degradated subset of tick-borne Borrelia
duttonii
JOURNAL PLoS 4 (9), e1000185 (2008)
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 22945)
AUTHORS Audic,S.
TITLE Direct Submission
JOURNAL Submitted (17-MAR-2008) Institut de Biologie structurale et
Microbiologie (IBSM), CNRS-Information Genomique et structurale,
CNRS - UPR2589, Parc Scientifique de Luminy - 163 Avenue de Luminy
- Case 934 FR-13288, Marseille cedex 09, France
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
CP000995.1.
DNA/Bacteria source is available for Michel Drancourt, Unite de
Recherche sur les Maladies Infectieuses et Tropicales Emergentes,
Faculte de Medecine, Marseille, France:
michel.drancourt@medecine.univ-mrs.fr
Plasmid sequence lacks part of the telomeres.
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 12/28/2022 01:15:04
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.4
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 1,230
CDSs (total) :: 1,192
Genes (coding) :: 1,099
CDSs (with protein) :: 1,099
Genes (RNA) :: 38
rRNAs :: 1, 1, 1 (5S, 16S, 23S)
complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)
tRNAs :: 32
ncRNAs :: 3
Pseudo Genes (total) :: 93
CDSs (without protein) :: 93
Pseudo Genes (ambiguous residues) :: 0 of 93
Pseudo Genes (frameshifted) :: 59 of 93
Pseudo Genes (incomplete) :: 46 of 93
Pseudo Genes (internal stop) :: 32 of 93
Pseudo Genes (multiple problems) :: 35 of 93
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..22945
/organism="Borrelia recurrentis A1"
/mol_type="genomic DNA"
/strain="A1"
/db_xref="taxon:412418"
/plasmid="pl23"
gene complement(1296..1493)
/locus_tag="BRE_RS06570"
CDS complement(1296..1493)
/locus_tag="BRE_RS06570"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_232212753.1"
/translation="MKENDSNNILLVQIMISVFESIFLNQGDIRDVKENARKLFFYRR
GKELLNSIDELYVVYHIARLN"
gene complement(1509..2237)
/locus_tag="BRE_RS04895"
/old_locus_tag="BRE_6001"
CDS complement(1509..2237)
/locus_tag="BRE_RS04895"
/old_locus_tag="BRE_6001"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_232212754.1"
/translation="MTRYNDVFILLMLISIVSCKNAVDGTKTVKDVNGNARNGSRAKS
DFVVANGLDIRNGPALENNSGIDNANIRNDVDRLSKDDIVQLKTFITKSVKYARSLCL
LIQEYHTIYSFLKNYVYCVNGSGNCDNAKLTKESIDVIVKMKVDNIVDKLENILNYFK
IHNPKMRIDSIEQLKKIFKYHVNFVFDSNEIKMDQVVDVVKLIINAYENVIDTAVNMY
ADMFSFIVSQCSSKKLAEISKNFV"
gene complement(2537..3990)
/gene="guaB"
/locus_tag="BRE_RS04900"
/old_locus_tag="BRE_6002"
/pseudo
CDS complement(2537..3990)
/gene="guaB"
/locus_tag="BRE_RS04900"
/old_locus_tag="BRE_6002"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539343.1"
/GO_function="GO:0003938 - IMP dehydrogenase activity
[Evidence IEA]"
/GO_process="GO:0009152 - purine ribonucleotide
biosynthetic process [Evidence IEA]"
/note="frameshifted; internal stop; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IMP dehydrogenase"
gene complement(4020..>4535)
/locus_tag="BRE_RS04905"
/old_locus_tag="BRE_6003"
/pseudo
CDS complement(4020..>4535)
/locus_tag="BRE_RS04905"
/old_locus_tag="BRE_6003"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002664503.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="GMP synthase (glutamine-hydrolyzing)"
gene complement(5082..6437)
/locus_tag="BRE_RS04910"
/old_locus_tag="BRE_6004"
CDS complement(5082..6437)
/locus_tag="BRE_RS04910"
/old_locus_tag="BRE_6004"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539671.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="NCS2 family permease"
/protein_id="WP_012539558.1"
/translation="MSDNNETLISQIKNNSIDYKTEIIAGITTFLSMAYIIVVNPYIL
SHAGMPIGALVTATCLTAGFAAIFMGFYTNTPLALASGMGINAFFAFSVVKGMNIPWE
IALGAVFIEGIIFIVLSLSGMREEIVNAIPGNLRCAITVGIGLFIAFIGFVNSEIIVR
NESTLVGLGHIMNFKVLLTLLGIIAIFVFELKMMKGSILLSICMTTLIAWCYALFDRN
AALNMGIRLPDGFLRYESIAPIFNKLSFEYVLGKNFWSFSFIVFILLFNDLFDTIGTL
VGVASKGNLVDSRGKIRNANKILLVDAVATTFGALLGVSPVTTYIESSTGIAEGGKTG
FTSVVTGILFILSVFFAPLFVAVPTGATSAALIYVGFFMCKDIKNIDFANIREAIPSF
LILFLIPLTYSIAVGIGVGIIFYVIISVLYGLITREGIKVSPVIFLLFFIFVLKLIFS
H"
gene complement(6559..7017)
/locus_tag="BRE_RS04915"
/old_locus_tag="BRE_6005"
CDS complement(6559..7017)
/locus_tag="BRE_RS04915"
/old_locus_tag="BRE_6005"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014687067.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012539559.1"
/translation="MIKFIKYFILLHFVFLMFSCETIDLKDIDKDLEGLSKNSKYIRL
IFGNNKISLRHYFTIAGKFHLRYKEPLFLKCDNDIVALFLFRRYKRIGSGYIQTFFSV
GKDVSLKVYLELVRRKKFFIINSAGQVLKTIIFSNNSNSEDVLLQNNKII"
gene complement(7056..7568)
/locus_tag="BRE_RS04920"
/old_locus_tag="BRE_6006"
CDS complement(7056..7568)
/locus_tag="BRE_RS04920"
/old_locus_tag="BRE_6006"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014687066.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012539560.1"
/translation="MRYSFFLFVLFFFSCKTLSVHEILDKKFDKIERASYFLYFYPNS
QIYIKRDKLTNNFSVFLNIVLNLDLKSDFNSDYLKLIQDGNYIGNVSISKVVSIGRFR
FLYVNIDRGNSDLILRALNPHKSLSFVLDEYSYQVWTRETLEYDAKFIDVDFESSRNT
LKYVLDNNIL"
gene 7615..8073
/locus_tag="BRE_RS04925"
/old_locus_tag="BRE_6007"
CDS 7615..8073
/locus_tag="BRE_RS04925"
/old_locus_tag="BRE_6007"
/inference="COORDINATES: protein motif:HMM:NF017885.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ImmA/IrrE family metallo-endopeptidase"
/protein_id="WP_232212755.1"
/translation="MKSNNFSSYIKTPYIYSDYIISKYAVLLIPVPIIKIVIGEGLKV
FEITFEKKYKNFSGYIKPNKKAIYINETMNLTNKRFAIAQQLGHYLMHKYQVFNPSKR
TDIINTKDNNMTIEANIFATNLLIPTTTLKLKVPQYKSIRYPQKIMAKEF"
gene 8107..8301
/locus_tag="BRE_RS06575"
CDS 8107..8301
/locus_tag="BRE_RS06575"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_232212756.1"
/translation="MLNEIHKIEKENKIQKKLKTKQIDRTKAKDLLLQNIDQLKKSIA
IDLEKREITRKASIKKFLKN"
gene complement(8318..8818)
/locus_tag="BRE_RS04930"
/old_locus_tag="BRE_6008"
CDS complement(8318..8818)
/locus_tag="BRE_RS04930"
/old_locus_tag="BRE_6008"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539675.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_232212757.1"
/translation="MLDKFDSNDDFNFLTLRELMAYPELRISGIDLKKYAVLNDLYNN
NFEFIKGDQEGFVSISDSSYNSNIEYIKKLYLYNKKLYKIIVAYSIVQGSSFKSEILK
YFDRHNIKEKFPLRINVPFYRTNIGDKSWVVIKKNFLDLLIQDKRSLFVAKRKLENML
EIFSVQ"
gene 8981..10237
/locus_tag="BRE_RS04935"
/old_locus_tag="BRE_6009"
CDS 8981..10237
/locus_tag="BRE_RS04935"
/old_locus_tag="BRE_6009"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014654069.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ankyrin repeat domain-containing protein"
/protein_id="WP_012539562.1"
/translation="MSYHTLSNISIYVGYIIIGITSFTIFNTNLRIKIKNKMKKLSFL
YYMTLFIFFIIATNLSHYFSEKQLLEDFQKFKKDFFEIHQINETFLKKYILPLKEPIK
MELMSKLNPINTIFNASIEKYSQKINKTPTDIKKNYDAYIKATNTEIKSKISQLEREI
LPMYNKYKLPCSNNQISNISVDKDGNIIPILRNSEGKITNLLFYDQTYNLTLFKVYNN
HKVKFEITKNDNNYFKELINVYYIDSHNTKRNIDYYKNNIDTIPYYIDLTENQDNFLK
SIKIKNEYKEYIKEKNKLKILINNDKLNDFKTFLKQNPNTFSLNTIFSDGNPVLIYAI
KSKAKNIINHIMSKDFNINLTDQENKTALHHAIINEYDITFIKSLITKGANPHIKDLT
KKLPSDYTPKDGEIYQYLHIYNNKNN"
gene 11054..12685
/locus_tag="BRE_RS04940"
/old_locus_tag="BRE_6010"
CDS 11054..12685
/locus_tag="BRE_RS04940"
/old_locus_tag="BRE_6010"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539563.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0008982 -
protein-N(PI)-phosphohistidine-sugar phosphotransferase
activity [Evidence IEA]"
/GO_process="GO:0009401 - phosphoenolpyruvate-dependent
sugar phosphotransferase system [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="PTS transporter subunit EIIC"
/protein_id="WP_012539563.1"
/translation="MSILSKSIFTTLQKVGKAFMLPIALLPIAGLLLGIGSALTNKTM
IQTYGIEALFGEKTIMHATLSLIKYTGEVIFANLPLMFAIAIPIGLAKAEKGTAALAG
VIGFLVMHQTINGVLSIQGITPATTNVEALLAIGTTEAEAISKSQEYTNVLGIFSLQM
SVMGGMIAGFIAAMLHNKLHNIHLPTFLAFFGGSRFIPIITTLVMFIVGIILTCIWPF
IQGMMTSLGNIIEKSGYFGSFAYGAIKRSLIPFGLHHIFYMPFWQTSLGGTMEINGEL
ISGAQNIFFKQLADPNTTHFEVTKGTRFFSGEFIVMIFGLPGAALAMYHTAKTENKKD
AASLLISAGFTSMLTGITEPLEFAFLFAAPALYYLIYVPLFGLAHLLAHIFNIGVGLT
FSGGLIDMFLFGILQGNSKTTWIMIPTIGIFYFIGFYYIFKLAIIKFNLKTPGREDIE
EDIIKTNPHKTKISEIARKVLEGLGGKGNITYLDACASRLRINVNQIELVKSDIYFKS
IGASGMLKKGNDIQIVFGGVSDNIRMEINKIQIIK"
gene 12768..13052
/locus_tag="BRE_RS04945"
/old_locus_tag="BRE_6011"
CDS 12768..13052
/locus_tag="BRE_RS04945"
/old_locus_tag="BRE_6011"
/EC_number="3.6.1.7"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539564.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="acylphosphatase"
/protein_id="WP_012539564.1"
/translation="MMHKYQYFISGKVQGIGFRFFTEQIAKKIGIKGFVKNLDDGRVE
IIAFFINNKQIDSFENALKKGNGYSKIHKIEKKILDTKYPFDFKNFCSYY"
gene complement(13027..13485)
/locus_tag="BRE_RS04950"
/old_locus_tag="BRE_6012"
CDS complement(13027..13485)
/locus_tag="BRE_RS04950"
/old_locus_tag="BRE_6012"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539565.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_041178226.1"
/translation="MDTGFLYFFKKALSVDDNRMVYISYLYDNLVSIQPMQDWLKIDF
RDSKRGKKYFFLFQRNKLNGEFISCNFLRTETNHALDIKFSDGNLNIFCKDRKSLEFL
KFRVEHFFKSSTKSLKVVSKSNNKPKVGKIKVIKANIRKNININNKNKNF"
gene complement(13574..14923)
/locus_tag="BRE_RS04955"
/old_locus_tag="BRE_6013"
CDS complement(13574..14923)
/locus_tag="BRE_RS04955"
/old_locus_tag="BRE_6013"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014687064.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="protelomerase family protein"
/protein_id="WP_041178227.1"
/translation="MSLKVNIKKDLELFRKNLEEIYVKYLKQEISYSKLKMGLEMLAE
KHKNILLRKNKFTNLSMILNLSKTRKIIKEYINLAVIEEIRQKNKLLFFWIPKEIKEL
SNIDIKDLCKIEELMIANNILGQKVYFESFLGLFKSPEWLNDYAHHYKISKINSYRRE
QISVKINLKTYIKIINILLTQKRDIRLKFYGVLMATGRRPVEIMKVSEFYVQDDEHIL
MKHIAKKKEHNLIHEIVFPTFADSRLVIDSISKIRYMERTEKLSKEIISSNLAYSYNR
LFRKIFENIFEPEESIYFCRRLYSRFSYLAFAPKNMELNLWITTVLGHEHDDIITAFH
YNRYILENLDDNADVDLLKLLNKRIHTYVRRKTTYSVVNMERLNTLLESCNIVDDNYI
KTLRVIQEFMIEKGLAELEMLRGLNVKIRKLFKQKYGYNYNYAKLGEYLSLIFGYDT"
gene complement(15020..15661)
/locus_tag="BRE_RS04960"
/old_locus_tag="BRE_6014"
CDS complement(15020..15661)
/locus_tag="BRE_RS04960"
/old_locus_tag="BRE_6014"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539680.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012539567.1"
/translation="MGVVYKFFLSFIFIFFSCNFDVSSKFFTPLEDAIKLEISRYESL
GNNKFKTYLHSKNYFESVKDINGYSYYFILDKTTKSIVMEIILFSRIAVLLDYKFGFI
FNFGFNFDFLNVISPNVFEFQVKKLFKKKVSLGLGNGLDIKNDRQISTYNFNLQHVEE
INREFENRNHKDDLNSSTSELMYFVGSSEYSVLRETYIVLYYYVFKAIERFMQ"
gene 15925..16863
/locus_tag="BRE_RS04965"
/old_locus_tag="BRE_6015"
CDS 15925..16863
/locus_tag="BRE_RS04965"
/old_locus_tag="BRE_6015"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539568.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="plasmid maintenance protein"
/protein_id="WP_012539568.1"
/translation="MRRKKINKIPFNKVVDRRLKVFWVIKKLQHNYFTNKKRYSLRNV
VIMVNSILEKNGFKTVTRRTIQSDITSIEKIGLLKTDFNPLGKNNGSFTYYIINKNLE
KMANKAISTAYFIQKKKNTEQAIDKAINKDKLKEQKQQFKISHQIFSCLLSYKKDKYY
RYKNSYFKKKKNGTEHLEKIILQKFNITKKDLSEIRNIVKTQLSYKNTLWNLKDFMEA
LREYKENDVVVFFKTFLKKKRDKIWFMSKRGVKTDFNFMIGSFKDKNKTKAQQMYQNQ
RKIVAPKMNYIDDPNKIVKVSDLVSDIIKAKNLISS"
gene 16886..17446
/locus_tag="BRE_RS04970"
/old_locus_tag="BRE_6016"
CDS 16886..17446
/locus_tag="BRE_RS04970"
/old_locus_tag="BRE_6016"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539569.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF226 domain-containing protein"
/protein_id="WP_012539569.1"
/translation="MATCELKAKLLARRLELNKANNNFFKRIEDKNYKKMYHTKIFSM
INNFEAKPNKGKFWLCFRNVFDPTKCESLHLFHMRQGDRFMGIYYGFAKLPKPFIVHY
KENEVRKTSKIIKIYYIEFRFKKGSVFCYLRSLCTLLQSKNKEKNFYNSLLSRTLKLE
KEVHRFYGKEYFEDKGILKWIKENQK"
gene 17422..18186
/locus_tag="BRE_RS04975"
/old_locus_tag="BRE_6017"
CDS 17422..18186
/locus_tag="BRE_RS04975"
/old_locus_tag="BRE_6017"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539570.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParA family protein"
/protein_id="WP_012539570.1"
/translation="MDKRKPKIITVASIKGGVGKSTTALFFSNILSSKNYKVLLIDLD
PQASSTSFYINIIKGQNVDIKKINIYRVLKKGLDIENAVINVNTNIDFIASHLSLSQF
NEENISLKESLLKIFLSYIKYRYDFIIMDTAPTLGSLLNNSLIITDYLIVPLPTDQWA
IESLDLITNRLRDIFRNELPMFYLVTNLVERQNIDRELKNFIESEYKDNFLGSVPKRD
NLRKTVFYRNNFNPNEDYYKAYEGILDTFLKKIYHN"
gene 18245..18796
/locus_tag="BRE_RS04980"
/old_locus_tag="BRE_6018"
CDS 18245..18796
/locus_tag="BRE_RS04980"
/old_locus_tag="BRE_6018"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014687058.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="chromosome replication/partitioning protein"
/protein_id="WP_041178228.1"
/translation="MSKNKKIEIVRRIDLELDGIKEFNKTREERYLELKEKLKVLIKE
ESYNKIETARIFKEINESKYYALDGYKSFASFIKSYKIAKTSIYRYIKLVAGIDSGKI
DYDLILNRGVDYAIQVLENGHLLCKSSAKPLKSLRFRLDDEESFSFYRSNIKFASFLL
QEVYKIEKDFFYKMQDRYNSLKT"
gene complement(19198..19737)
/locus_tag="BRE_RS04985"
/old_locus_tag="BRE_6019"
CDS complement(19198..19737)
/locus_tag="BRE_RS04985"
/old_locus_tag="BRE_6019"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539685.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012539572.1"
/translation="MLYSFKNLKQTTMLLISLFLACSSIDIEHDTINKKVRIYQYLNK
NLELKGVIDYQNNTTQIFLHTKLKNHSIIKQTPLILPDTTKIEGKTSYEYDNKSSSGK
WVNASSFILNKPILEKLLNEDEYVYNKEDVKIQVGLETLKMNKAKIKNFLIKLNITEK
QYIKNKHTEKQNIKKYKEL"
gene 20295..21386
/locus_tag="BRE_RS04990"
/old_locus_tag="BRE_6020"
CDS 20295..21386
/locus_tag="BRE_RS04990"
/old_locus_tag="BRE_6020"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539573.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="variable large family protein"
/protein_id="WP_012539573.1"
/translation="MKRGIKGEMINRVMIIMVLVMVMMGCNSGGGIKEGEGESSQSKF
LKSIIGLRNEFLNVFTSFGDMVGGILGFNAVKSDDKRSKVGEHFKTIGDGLKSTKDKL
DELSKQIVSTSNADIKGVEAVIQGTSEVIAKLITSITELAGITKEGNVDIGDAGTAGS
AAAVAADKASVEAIIKGVKEIVETAEKSGVKIEKGNAGNSVANGNGPKAVVHNVQATA
GDATKLAGEVAKADPWAMIDKIKNAKTKNNVAPAANDDAGQLATATGANDNGSASTNA
DLAASVALKAMTKGGKFTQPAANEDGAIKAAAASAVNKVLGILDMIIRKAVNLELDKV
KEAVKGIRYSETSGSNATEAGTIQTSTVK"
gene <21516..21851
/locus_tag="BRE_RS06030"
/pseudo
CDS <21516..21851
/locus_tag="BRE_RS06030"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012539666.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing N-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="variable large family protein"
CONTIG join(CP000995.1:1..22945)
//