GenomeNet

Database: RefSeq
Entry: NC_011252
LinkDB: NC_011252
Original site: NC_011252 
LOCUS       NC_011252              22945 bp    DNA     linear   CON 28-DEC-2022
DEFINITION  Borrelia recurrentis A1 plasmid pl23, complete sequence.
ACCESSION   NC_011252
VERSION     NC_011252.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02603586
            Assembly: GCF_000019705.1
KEYWORDS    RefSeq.
SOURCE      Borrelia recurrentis A1
  ORGANISM  Borrelia recurrentis A1
            Bacteria; Spirochaetota; Spirochaetia; Spirochaetales;
            Borreliaceae; Borrelia.
REFERENCE   1  (bases 1 to 22945)
  AUTHORS   Lescot,M., Audic,S., Robert,C., Nguyen,T., Blanc,g., Cutler,S.J.,
            Wincker,P., Couloux,A., Claverie,J.-M., Raoult,D. and Drancourt,M.
  TITLE     The genome of Borrelia recurrentis, the agent of deadly louse-borne
            relapsing fever, is a degradated subset of tick-borne Borrelia
            duttonii
  JOURNAL   PLoS 4 (9), e1000185 (2008)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22945)
  AUTHORS   Audic,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2008) Institut de Biologie structurale et
            Microbiologie (IBSM), CNRS-Information Genomique et structurale,
            CNRS - UPR2589, Parc Scientifique de Luminy - 163 Avenue de Luminy
            - Case 934 FR-13288, Marseille cedex 09, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CP000995.1.
            DNA/Bacteria source is available for Michel Drancourt, Unite de
            Recherche sur les Maladies Infectieuses et Tropicales Emergentes,
            Faculte de Medecine, Marseille, France:
            michel.drancourt@medecine.univ-mrs.fr
            Plasmid sequence lacks part of the telomeres.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 12/28/2022 01:15:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.4
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,230
            CDSs (total)                      :: 1,192
            Genes (coding)                    :: 1,099
            CDSs (with protein)               :: 1,099
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 59 of 93
            Pseudo Genes (incomplete)         :: 46 of 93
            Pseudo Genes (internal stop)      :: 32 of 93
            Pseudo Genes (multiple problems)  :: 35 of 93
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..22945
                     /organism="Borrelia recurrentis A1"
                     /mol_type="genomic DNA"
                     /strain="A1"
                     /db_xref="taxon:412418"
                     /plasmid="pl23"
     gene            complement(1296..1493)
                     /locus_tag="BRE_RS06570"
     CDS             complement(1296..1493)
                     /locus_tag="BRE_RS06570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_232212753.1"
                     /translation="MKENDSNNILLVQIMISVFESIFLNQGDIRDVKENARKLFFYRR
                     GKELLNSIDELYVVYHIARLN"
     gene            complement(1509..2237)
                     /locus_tag="BRE_RS04895"
                     /old_locus_tag="BRE_6001"
     CDS             complement(1509..2237)
                     /locus_tag="BRE_RS04895"
                     /old_locus_tag="BRE_6001"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_232212754.1"
                     /translation="MTRYNDVFILLMLISIVSCKNAVDGTKTVKDVNGNARNGSRAKS
                     DFVVANGLDIRNGPALENNSGIDNANIRNDVDRLSKDDIVQLKTFITKSVKYARSLCL
                     LIQEYHTIYSFLKNYVYCVNGSGNCDNAKLTKESIDVIVKMKVDNIVDKLENILNYFK
                     IHNPKMRIDSIEQLKKIFKYHVNFVFDSNEIKMDQVVDVVKLIINAYENVIDTAVNMY
                     ADMFSFIVSQCSSKKLAEISKNFV"
     gene            complement(2537..3990)
                     /gene="guaB"
                     /locus_tag="BRE_RS04900"
                     /old_locus_tag="BRE_6002"
                     /pseudo
     CDS             complement(2537..3990)
                     /gene="guaB"
                     /locus_tag="BRE_RS04900"
                     /old_locus_tag="BRE_6002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539343.1"
                     /GO_function="GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
     gene            complement(4020..>4535)
                     /locus_tag="BRE_RS04905"
                     /old_locus_tag="BRE_6003"
                     /pseudo
     CDS             complement(4020..>4535)
                     /locus_tag="BRE_RS04905"
                     /old_locus_tag="BRE_6003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002664503.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
     gene            complement(5082..6437)
                     /locus_tag="BRE_RS04910"
                     /old_locus_tag="BRE_6004"
     CDS             complement(5082..6437)
                     /locus_tag="BRE_RS04910"
                     /old_locus_tag="BRE_6004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="WP_012539558.1"
                     /translation="MSDNNETLISQIKNNSIDYKTEIIAGITTFLSMAYIIVVNPYIL
                     SHAGMPIGALVTATCLTAGFAAIFMGFYTNTPLALASGMGINAFFAFSVVKGMNIPWE
                     IALGAVFIEGIIFIVLSLSGMREEIVNAIPGNLRCAITVGIGLFIAFIGFVNSEIIVR
                     NESTLVGLGHIMNFKVLLTLLGIIAIFVFELKMMKGSILLSICMTTLIAWCYALFDRN
                     AALNMGIRLPDGFLRYESIAPIFNKLSFEYVLGKNFWSFSFIVFILLFNDLFDTIGTL
                     VGVASKGNLVDSRGKIRNANKILLVDAVATTFGALLGVSPVTTYIESSTGIAEGGKTG
                     FTSVVTGILFILSVFFAPLFVAVPTGATSAALIYVGFFMCKDIKNIDFANIREAIPSF
                     LILFLIPLTYSIAVGIGVGIIFYVIISVLYGLITREGIKVSPVIFLLFFIFVLKLIFS
                     H"
     gene            complement(6559..7017)
                     /locus_tag="BRE_RS04915"
                     /old_locus_tag="BRE_6005"
     CDS             complement(6559..7017)
                     /locus_tag="BRE_RS04915"
                     /old_locus_tag="BRE_6005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014687067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_012539559.1"
                     /translation="MIKFIKYFILLHFVFLMFSCETIDLKDIDKDLEGLSKNSKYIRL
                     IFGNNKISLRHYFTIAGKFHLRYKEPLFLKCDNDIVALFLFRRYKRIGSGYIQTFFSV
                     GKDVSLKVYLELVRRKKFFIINSAGQVLKTIIFSNNSNSEDVLLQNNKII"
     gene            complement(7056..7568)
                     /locus_tag="BRE_RS04920"
                     /old_locus_tag="BRE_6006"
     CDS             complement(7056..7568)
                     /locus_tag="BRE_RS04920"
                     /old_locus_tag="BRE_6006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014687066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_012539560.1"
                     /translation="MRYSFFLFVLFFFSCKTLSVHEILDKKFDKIERASYFLYFYPNS
                     QIYIKRDKLTNNFSVFLNIVLNLDLKSDFNSDYLKLIQDGNYIGNVSISKVVSIGRFR
                     FLYVNIDRGNSDLILRALNPHKSLSFVLDEYSYQVWTRETLEYDAKFIDVDFESSRNT
                     LKYVLDNNIL"
     gene            7615..8073
                     /locus_tag="BRE_RS04925"
                     /old_locus_tag="BRE_6007"
     CDS             7615..8073
                     /locus_tag="BRE_RS04925"
                     /old_locus_tag="BRE_6007"
                     /inference="COORDINATES: protein motif:HMM:NF017885.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="WP_232212755.1"
                     /translation="MKSNNFSSYIKTPYIYSDYIISKYAVLLIPVPIIKIVIGEGLKV
                     FEITFEKKYKNFSGYIKPNKKAIYINETMNLTNKRFAIAQQLGHYLMHKYQVFNPSKR
                     TDIINTKDNNMTIEANIFATNLLIPTTTLKLKVPQYKSIRYPQKIMAKEF"
     gene            8107..8301
                     /locus_tag="BRE_RS06575"
     CDS             8107..8301
                     /locus_tag="BRE_RS06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_232212756.1"
                     /translation="MLNEIHKIEKENKIQKKLKTKQIDRTKAKDLLLQNIDQLKKSIA
                     IDLEKREITRKASIKKFLKN"
     gene            complement(8318..8818)
                     /locus_tag="BRE_RS04930"
                     /old_locus_tag="BRE_6008"
     CDS             complement(8318..8818)
                     /locus_tag="BRE_RS04930"
                     /old_locus_tag="BRE_6008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_232212757.1"
                     /translation="MLDKFDSNDDFNFLTLRELMAYPELRISGIDLKKYAVLNDLYNN
                     NFEFIKGDQEGFVSISDSSYNSNIEYIKKLYLYNKKLYKIIVAYSIVQGSSFKSEILK
                     YFDRHNIKEKFPLRINVPFYRTNIGDKSWVVIKKNFLDLLIQDKRSLFVAKRKLENML
                     EIFSVQ"
     gene            8981..10237
                     /locus_tag="BRE_RS04935"
                     /old_locus_tag="BRE_6009"
     CDS             8981..10237
                     /locus_tag="BRE_RS04935"
                     /old_locus_tag="BRE_6009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014654069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="WP_012539562.1"
                     /translation="MSYHTLSNISIYVGYIIIGITSFTIFNTNLRIKIKNKMKKLSFL
                     YYMTLFIFFIIATNLSHYFSEKQLLEDFQKFKKDFFEIHQINETFLKKYILPLKEPIK
                     MELMSKLNPINTIFNASIEKYSQKINKTPTDIKKNYDAYIKATNTEIKSKISQLEREI
                     LPMYNKYKLPCSNNQISNISVDKDGNIIPILRNSEGKITNLLFYDQTYNLTLFKVYNN
                     HKVKFEITKNDNNYFKELINVYYIDSHNTKRNIDYYKNNIDTIPYYIDLTENQDNFLK
                     SIKIKNEYKEYIKEKNKLKILINNDKLNDFKTFLKQNPNTFSLNTIFSDGNPVLIYAI
                     KSKAKNIINHIMSKDFNINLTDQENKTALHHAIINEYDITFIKSLITKGANPHIKDLT
                     KKLPSDYTPKDGEIYQYLHIYNNKNN"
     gene            11054..12685
                     /locus_tag="BRE_RS04940"
                     /old_locus_tag="BRE_6010"
     CDS             11054..12685
                     /locus_tag="BRE_RS04940"
                     /old_locus_tag="BRE_6010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539563.1"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="WP_012539563.1"
                     /translation="MSILSKSIFTTLQKVGKAFMLPIALLPIAGLLLGIGSALTNKTM
                     IQTYGIEALFGEKTIMHATLSLIKYTGEVIFANLPLMFAIAIPIGLAKAEKGTAALAG
                     VIGFLVMHQTINGVLSIQGITPATTNVEALLAIGTTEAEAISKSQEYTNVLGIFSLQM
                     SVMGGMIAGFIAAMLHNKLHNIHLPTFLAFFGGSRFIPIITTLVMFIVGIILTCIWPF
                     IQGMMTSLGNIIEKSGYFGSFAYGAIKRSLIPFGLHHIFYMPFWQTSLGGTMEINGEL
                     ISGAQNIFFKQLADPNTTHFEVTKGTRFFSGEFIVMIFGLPGAALAMYHTAKTENKKD
                     AASLLISAGFTSMLTGITEPLEFAFLFAAPALYYLIYVPLFGLAHLLAHIFNIGVGLT
                     FSGGLIDMFLFGILQGNSKTTWIMIPTIGIFYFIGFYYIFKLAIIKFNLKTPGREDIE
                     EDIIKTNPHKTKISEIARKVLEGLGGKGNITYLDACASRLRINVNQIELVKSDIYFKS
                     IGASGMLKKGNDIQIVFGGVSDNIRMEINKIQIIK"
     gene            12768..13052
                     /locus_tag="BRE_RS04945"
                     /old_locus_tag="BRE_6011"
     CDS             12768..13052
                     /locus_tag="BRE_RS04945"
                     /old_locus_tag="BRE_6011"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="WP_012539564.1"
                     /translation="MMHKYQYFISGKVQGIGFRFFTEQIAKKIGIKGFVKNLDDGRVE
                     IIAFFINNKQIDSFENALKKGNGYSKIHKIEKKILDTKYPFDFKNFCSYY"
     gene            complement(13027..13485)
                     /locus_tag="BRE_RS04950"
                     /old_locus_tag="BRE_6012"
     CDS             complement(13027..13485)
                     /locus_tag="BRE_RS04950"
                     /old_locus_tag="BRE_6012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_041178226.1"
                     /translation="MDTGFLYFFKKALSVDDNRMVYISYLYDNLVSIQPMQDWLKIDF
                     RDSKRGKKYFFLFQRNKLNGEFISCNFLRTETNHALDIKFSDGNLNIFCKDRKSLEFL
                     KFRVEHFFKSSTKSLKVVSKSNNKPKVGKIKVIKANIRKNININNKNKNF"
     gene            complement(13574..14923)
                     /locus_tag="BRE_RS04955"
                     /old_locus_tag="BRE_6013"
     CDS             complement(13574..14923)
                     /locus_tag="BRE_RS04955"
                     /old_locus_tag="BRE_6013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014687064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protelomerase family protein"
                     /protein_id="WP_041178227.1"
                     /translation="MSLKVNIKKDLELFRKNLEEIYVKYLKQEISYSKLKMGLEMLAE
                     KHKNILLRKNKFTNLSMILNLSKTRKIIKEYINLAVIEEIRQKNKLLFFWIPKEIKEL
                     SNIDIKDLCKIEELMIANNILGQKVYFESFLGLFKSPEWLNDYAHHYKISKINSYRRE
                     QISVKINLKTYIKIINILLTQKRDIRLKFYGVLMATGRRPVEIMKVSEFYVQDDEHIL
                     MKHIAKKKEHNLIHEIVFPTFADSRLVIDSISKIRYMERTEKLSKEIISSNLAYSYNR
                     LFRKIFENIFEPEESIYFCRRLYSRFSYLAFAPKNMELNLWITTVLGHEHDDIITAFH
                     YNRYILENLDDNADVDLLKLLNKRIHTYVRRKTTYSVVNMERLNTLLESCNIVDDNYI
                     KTLRVIQEFMIEKGLAELEMLRGLNVKIRKLFKQKYGYNYNYAKLGEYLSLIFGYDT"
     gene            complement(15020..15661)
                     /locus_tag="BRE_RS04960"
                     /old_locus_tag="BRE_6014"
     CDS             complement(15020..15661)
                     /locus_tag="BRE_RS04960"
                     /old_locus_tag="BRE_6014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_012539567.1"
                     /translation="MGVVYKFFLSFIFIFFSCNFDVSSKFFTPLEDAIKLEISRYESL
                     GNNKFKTYLHSKNYFESVKDINGYSYYFILDKTTKSIVMEIILFSRIAVLLDYKFGFI
                     FNFGFNFDFLNVISPNVFEFQVKKLFKKKVSLGLGNGLDIKNDRQISTYNFNLQHVEE
                     INREFENRNHKDDLNSSTSELMYFVGSSEYSVLRETYIVLYYYVFKAIERFMQ"
     gene            15925..16863
                     /locus_tag="BRE_RS04965"
                     /old_locus_tag="BRE_6015"
     CDS             15925..16863
                     /locus_tag="BRE_RS04965"
                     /old_locus_tag="BRE_6015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid maintenance protein"
                     /protein_id="WP_012539568.1"
                     /translation="MRRKKINKIPFNKVVDRRLKVFWVIKKLQHNYFTNKKRYSLRNV
                     VIMVNSILEKNGFKTVTRRTIQSDITSIEKIGLLKTDFNPLGKNNGSFTYYIINKNLE
                     KMANKAISTAYFIQKKKNTEQAIDKAINKDKLKEQKQQFKISHQIFSCLLSYKKDKYY
                     RYKNSYFKKKKNGTEHLEKIILQKFNITKKDLSEIRNIVKTQLSYKNTLWNLKDFMEA
                     LREYKENDVVVFFKTFLKKKRDKIWFMSKRGVKTDFNFMIGSFKDKNKTKAQQMYQNQ
                     RKIVAPKMNYIDDPNKIVKVSDLVSDIIKAKNLISS"
     gene            16886..17446
                     /locus_tag="BRE_RS04970"
                     /old_locus_tag="BRE_6016"
     CDS             16886..17446
                     /locus_tag="BRE_RS04970"
                     /old_locus_tag="BRE_6016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF226 domain-containing protein"
                     /protein_id="WP_012539569.1"
                     /translation="MATCELKAKLLARRLELNKANNNFFKRIEDKNYKKMYHTKIFSM
                     INNFEAKPNKGKFWLCFRNVFDPTKCESLHLFHMRQGDRFMGIYYGFAKLPKPFIVHY
                     KENEVRKTSKIIKIYYIEFRFKKGSVFCYLRSLCTLLQSKNKEKNFYNSLLSRTLKLE
                     KEVHRFYGKEYFEDKGILKWIKENQK"
     gene            17422..18186
                     /locus_tag="BRE_RS04975"
                     /old_locus_tag="BRE_6017"
     CDS             17422..18186
                     /locus_tag="BRE_RS04975"
                     /old_locus_tag="BRE_6017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="WP_012539570.1"
                     /translation="MDKRKPKIITVASIKGGVGKSTTALFFSNILSSKNYKVLLIDLD
                     PQASSTSFYINIIKGQNVDIKKINIYRVLKKGLDIENAVINVNTNIDFIASHLSLSQF
                     NEENISLKESLLKIFLSYIKYRYDFIIMDTAPTLGSLLNNSLIITDYLIVPLPTDQWA
                     IESLDLITNRLRDIFRNELPMFYLVTNLVERQNIDRELKNFIESEYKDNFLGSVPKRD
                     NLRKTVFYRNNFNPNEDYYKAYEGILDTFLKKIYHN"
     gene            18245..18796
                     /locus_tag="BRE_RS04980"
                     /old_locus_tag="BRE_6018"
     CDS             18245..18796
                     /locus_tag="BRE_RS04980"
                     /old_locus_tag="BRE_6018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014687058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome replication/partitioning protein"
                     /protein_id="WP_041178228.1"
                     /translation="MSKNKKIEIVRRIDLELDGIKEFNKTREERYLELKEKLKVLIKE
                     ESYNKIETARIFKEINESKYYALDGYKSFASFIKSYKIAKTSIYRYIKLVAGIDSGKI
                     DYDLILNRGVDYAIQVLENGHLLCKSSAKPLKSLRFRLDDEESFSFYRSNIKFASFLL
                     QEVYKIEKDFFYKMQDRYNSLKT"
     gene            complement(19198..19737)
                     /locus_tag="BRE_RS04985"
                     /old_locus_tag="BRE_6019"
     CDS             complement(19198..19737)
                     /locus_tag="BRE_RS04985"
                     /old_locus_tag="BRE_6019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_012539572.1"
                     /translation="MLYSFKNLKQTTMLLISLFLACSSIDIEHDTINKKVRIYQYLNK
                     NLELKGVIDYQNNTTQIFLHTKLKNHSIIKQTPLILPDTTKIEGKTSYEYDNKSSSGK
                     WVNASSFILNKPILEKLLNEDEYVYNKEDVKIQVGLETLKMNKAKIKNFLIKLNITEK
                     QYIKNKHTEKQNIKKYKEL"
     gene            20295..21386
                     /locus_tag="BRE_RS04990"
                     /old_locus_tag="BRE_6020"
     CDS             20295..21386
                     /locus_tag="BRE_RS04990"
                     /old_locus_tag="BRE_6020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539573.1"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="variable large family protein"
                     /protein_id="WP_012539573.1"
                     /translation="MKRGIKGEMINRVMIIMVLVMVMMGCNSGGGIKEGEGESSQSKF
                     LKSIIGLRNEFLNVFTSFGDMVGGILGFNAVKSDDKRSKVGEHFKTIGDGLKSTKDKL
                     DELSKQIVSTSNADIKGVEAVIQGTSEVIAKLITSITELAGITKEGNVDIGDAGTAGS
                     AAAVAADKASVEAIIKGVKEIVETAEKSGVKIEKGNAGNSVANGNGPKAVVHNVQATA
                     GDATKLAGEVAKADPWAMIDKIKNAKTKNNVAPAANDDAGQLATATGANDNGSASTNA
                     DLAASVALKAMTKGGKFTQPAANEDGAIKAAAASAVNKVLGILDMIIRKAVNLELDKV
                     KEAVKGIRYSETSGSNATEAGTIQTSTVK"
     gene            <21516..21851
                     /locus_tag="BRE_RS06030"
                     /pseudo
     CDS             <21516..21851
                     /locus_tag="BRE_RS06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012539666.1"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="variable large family protein"
CONTIG      join(CP000995.1:1..22945)
//
DBGET integrated database retrieval system