LOCUS NC_012858 660973 bp DNA circular BCT 05-JUL-2011
DEFINITION Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502,
complete sequence.
ACCESSION NC_012858
VERSION NC_012858.1 GI:241666492
DBLINK Project: 58991
BioProject: PRJNA58991
KEYWORDS .
SOURCE Rhizobium leguminosarum bv. trifolii WSM1325
ORGANISM Rhizobium leguminosarum bv. trifolii WSM1325
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
REFERENCE 1 (bases 1 to 660973)
AUTHORS Reeve,W., O'Hara,G., Chain,P., Ardley,J., Brau,L., Nandesena,K.,
Tiwari,R., Copeland,A., Nolan,M., Han,C., Brettin,T., Land,M.,
Ovchinikova,G., Ivanova,N., Mavromatis,K., Markowitz,V.,
Kyrpides,N., Melino,V., Denton,M., Yates,R. and Howieson,J.
TITLE Complete genome sequence of Rhizobium leguminosarum bv. trifolii
strain WSM1325, an effective microsymbiont of annual Mediterranean
clovers
JOURNAL Stand Genomic Sci 2 (3), 347-356 (2010)
PUBMED 21304718
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 660973)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 660973)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Last,F.I., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
Ovchinnikova,G. and Reeve,W.G.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (20-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP001624.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4024173
Source DNA and bacteria available from Wayne G. Reeve
(W.Reeve@murdoch.edu.au)
Contacts: Wayne G. Reeve (W.Reeve@murdoch.edu.au)
David Bruce (microbe@cuba.jgi-psf.org)
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Rhizobium leguminosarum trifolii WSM1325
GOLD Stamp ID :: Gi01547
Greengenes ID :: 267555
Oxygen Requirement :: Aerobe
Cell Shape :: Rod-shaped
Motility :: Motile
Sporulation :: Nonsporulating
Temperature Range :: Mesophile
Biotic Relationship :: Symbiotic
Symbiotic Relationship :: Mutualistic
Diseases :: None
Habitat :: Host, Root nodule
Phenotypes :: Nitrogen fixation, Non-Pathogen
##Metadata-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..660973
/organism="Rhizobium leguminosarum bv. trifolii WSM1325"
/mol_type="genomic DNA"
/strain="WSM1325"
/db_xref="taxon:395491"
/plasmid="pR132502"
/biovar="trifolii"
gene 80..763
/locus_tag="Rleg_6574"
/db_xref="GeneID:8022941"
CDS 80..763
/locus_tag="Rleg_6574"
/inference="protein motif:PFAM:PF01381"
/note="PFAM: helix-turn-helix domain protein; cupin;
SMART: helix-turn-helix domain protein;
KEGG: rec:RHECIAT_PA0000338 putative transcriptional
regulator protein"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_002984577.1"
/db_xref="GI:241666493"
/db_xref="InterPro:IPR001387"
/db_xref="InterPro:IPR013096"
/db_xref="GeneID:8022941"
/translation="MKTKREAAEQPEQAQSGRAPFSQDPHAVREPKENNLEMAIGHEV
RAYRKKLGITVTDLAAATGISLGMLSKIENGNISPSLTTLQSLSRALGVPLTAFFRRF
EEPRNAVFVKAGQGIELERRGTRAGHQYNLLGHIDNNTSGVIVEPYLITLTADSDTFP
TFQHEGMEFLYMLEGEVVYRHGDQLFQMEPGDSLFFDADAPHGPEQLVKLPSKYLSII
TYPQRSSKG"
misc_feature 200..373
/locus_tag="Rleg_6574"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(212..214,224..226,299..301)
/locus_tag="Rleg_6574"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(221..223,296..298)
/locus_tag="Rleg_6574"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(242..247,278..280,287..289,299..304)
/locus_tag="Rleg_6574"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
misc_feature 548..733
/locus_tag="Rleg_6574"
/note="Cupin domain; Region: Cupin_2; pfam07883"
/db_xref="CDD:203791"
gene 852..1760
/locus_tag="Rleg_6575"
/db_xref="GeneID:8022825"
CDS 852..1760
/locus_tag="Rleg_6575"
/inference="protein motif:PFAM:PF00310"
/note="PFAM: glutamine amidotransferase class-II;
KEGG: glxB; amidophosphoribosyl transferase protein"
/codon_start=1
/transl_table=11
/product="glutamine amidotransferase class-II"
/protein_id="YP_002984578.1"
/db_xref="GI:241666494"
/db_xref="InterPro:IPR000583"
/db_xref="GeneID:8022825"
/translation="MCGIVGLFLKDKSLEPELGALLSSMLITMTDRGPDSAGIAIYGD
ASGSNAKITIQSANPKKDFADLEAELGQAVGAPVAIQVKSTHAVITLAKDLLDAGKAA
VSELRPNIRIMSSGDAIEIYKETGLPKDVVSRFAVNSMAGTHGIGHTRMATESAVTTL
GAHPFSTGSDQCLVHNGSLSNHNNLRRELKREGMTFETENDTEVAAAYLTAEMAKGKN
LGQALEGAVDDLDGFFTFVVGTKSGFGVVRDAIACKPAVMAETEQYVAFGSEYRALVN
LPGIENARVWEPEPATVYFWDHQKVA"
misc_feature 852..1754
/locus_tag="Rleg_6575"
/note="Glutamate synthase domain 1 [Amino acid transport
and metabolism]; Region: GltB; COG0067"
/db_xref="CDD:30416"
misc_feature 855..>983
/locus_tag="Rleg_6575"
/note="Glutamine amidotransferases class-II (GATase). The
glutaminase domain catalyzes an amide nitrogen transfer
from glutamine to the appropriate substrate. In this
process, glutamine is hydrolyzed to glutamic acid and
ammonia. This domain is related to...; Region: Gn_AT_II;
cl00319"
/db_xref="CDD:213093"
misc_feature 1173..1739
/locus_tag="Rleg_6575"
/note="Glutamine amidotransferases class-II
(Gn-AT)_GlxB-type. GlxB is a glutamine
amidotransferase-like protein of unknown function found in
bacteria and archaea. GlxB has a structural fold similar
to that of other class II glutamine amidotransferases...;
Region: GlxB; cd01907"
/db_xref="CDD:73286"
misc_feature order(1299..1304,1377..1382,1452..1454)
/locus_tag="Rleg_6575"
/note="putative active site [active]"
/db_xref="CDD:73286"
gene 1799..2485
/locus_tag="Rleg_6576"
/db_xref="GeneID:8022826"
CDS 1799..2485
/locus_tag="Rleg_6576"
/inference="protein motif:PFAM:PF01493"
/note="PFAM: glutamate synthase alpha subunit domain
protein;
KEGG: smd:Smed_3292 glutamate synthase alpha subunit
domain protein"
/codon_start=1
/transl_table=11
/product="glutamate synthase alpha subunit domain protein"
/protein_id="YP_002984579.1"
/db_xref="GI:241666495"
/db_xref="InterPro:IPR002489"
/db_xref="GeneID:8022826"
/translation="MPVIDLATTPLRELNSALHNIQNGSNDLSFEVVNPRGSHSVAVG
IDAPVTVDVKGSVGYYCAGMNDGGTVTVHGSAGPGVAENMMSGTVLIEGDASQYAGAT
GRGGLLVIKGNAASRCGISMKGIDIVVHGNIGHMSAFMGQSGHLVVLGNAGDALGDSL
YEAKLFVRGSVKSLGADCIEKELRPEHLTKLAELLEKAGVTEVRPEEFKRYGSARKLY
NFNIDNADAY"
misc_feature 1799..2482
/locus_tag="Rleg_6576"
/note="Glutamate synthase domain 3 [Amino acid transport
and metabolism]; Region: GltB; COG0070"
/db_xref="CDD:30419"
misc_feature 1892..2305
/locus_tag="Rleg_6576"
/note="GXGXG domain. This domain of unknown function is
found at the C-terminus of the large subunit (gltB) of
glutamate synthase (GltS), in subunit C of tungsten
formylmethanofuran dehydrogenase (FwdC) and in subunit C
of molybdenum formylmethanofuran...; Region: GXGXG;
cd00504"
/db_xref="CDD:29608"
misc_feature order(1901..1906,1964..1966,1973..1978,1988..1990,
2021..2029,2042..2044,2051..2053,2099..2104,2108..2110,
2135..2149,2156..2161,2165..2167,2192..2206,2213..2218,
2222..2224,2261..2263,2270..2272,2279..2281)
/locus_tag="Rleg_6576"
/note="domain_subunit interface; other site"
/db_xref="CDD:29608"
gene 2500..3828
/locus_tag="Rleg_6577"
/db_xref="GeneID:8022827"
CDS 2500..3828
/locus_tag="Rleg_6577"
/inference="protein motif:PFAM:PF01645"
/note="PFAM: ferredoxin-dependent glutamate synthase;
KEGG: sme:SMc02612 putative oxidoreductase protein"
/codon_start=1
/transl_table=11
/product="ferredoxin-dependent glutamate synthase"
/protein_id="YP_002984580.1"
/db_xref="GI:241666496"
/db_xref="InterPro:IPR002932"
/db_xref="GeneID:8022827"
/translation="MSYHNPYTPPRKSATFDDYTLAEIRRAAATGIYDIRGAGTKRKV
PHFDDLLFLGASISRYPLEGYREKCDTSVVLGARFAKKPIHLKTPITIAGMSFGALSG
NAKEALGRGATIAGTSTTTGDGGMTDEERGHSQTLVYQYLPSRYGMNPKDLRRADAIE
VVVGQGAKPGGGGMLLGQKISDRVANMRNLPKGIDQRSACRHPDWTGPDDLEIKILEL
REITDWEKPIYVKVGGARPYYDTALAVKAGADVVVLDGMQGGTAATQDVFIENVGMPT
LACIRPAVQALQDLGMHRKVQLIISGGIRSGADVAKALALGADAVAIGTAALVAIGDN
DPHWEEEYQKLGTTAGAYDDWHEGKDPAGITTQDPELMKRLDPIAAGRRLANYLKVMT
LEAQTIARACGKNHLHNLEPEDLCALTMEAAAMAQIPLAGTNWYPGKGGY"
misc_feature 2575..3753
/locus_tag="Rleg_6577"
/note="Glutamate synthase (GltS) FMN-binding domain. GltS
is a complex iron-sulfur flavoprotein that catalyzes the
reductive synthesis of L-glutamate from 2-oxoglutarate and
L-glutamine via intramolecular channelling of ammonia, a
reaction in the plant, yeast...; Region: GltS_FMN;
cd02808"
/db_xref="CDD:73370"
misc_feature 2632..3714
/locus_tag="Rleg_6577"
/note="Conserved region in glutamate synthase; Region:
Glu_synthase; pfam01645"
/db_xref="CDD:110632"
misc_feature order(2776..2787,2866..2868,2917..2919,2983..2985,
3001..3003,3061..3063,3190..3192,3277..3285,3400..3402,
3406..3408,3469..3474,3496..3498,3562..3564,3577..3579)
/locus_tag="Rleg_6577"
/note="active site"
/db_xref="CDD:73370"
misc_feature order(2776..2787,2866..2868,2917..2919,2983..2985,
3190..3192,3277..3282,3400..3402,3406..3408,3469..3474)
/locus_tag="Rleg_6577"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73370"
misc_feature order(3001..3003,3061..3063,3280..3285)
/locus_tag="Rleg_6577"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73370"
misc_feature order(3496..3498,3562..3564,3577..3579)
/locus_tag="Rleg_6577"
/note="3Fe-4S cluster binding site [ion binding]; other
site"
/db_xref="CDD:73370"
gene 3912..5219
/locus_tag="Rleg_6578"
/db_xref="GeneID:8022828"
CDS 3912..5219
/locus_tag="Rleg_6578"
/inference="protein motif:TFAM:TIGR03105"
/note="TIGRFAM: glutamine synthetase, type III;
PFAM: glutamine synthetase catalytic region;
KEGG: ret:RHE_PE00418 glutamine sinthetase protein"
/codon_start=1
/transl_table=11
/product="glutamine synthetase, type III"
/protein_id="YP_002984581.1"
/db_xref="GI:241666497"
/db_xref="InterPro:IPR008146"
/db_xref="InterPro:IPR017536"
/db_xref="GeneID:8022828"
/translation="MTLDLAAFAKDKGIKYFMISYTDLFGGQRAKLVPAEAIADMQKD
GAGFAGFATWLDLTPAHPDLFALPDASSVIQLPWKKDVAWVAADCVMNDQPVEQAPRV
VLKRLVAEAAKEGLRVKTGVEPEFFLISADGSVISDQFDTAEKPCYDQQAVMRRYDVI
AEICDYMLELGWKPYQNDHEDANGQFEMNWEYDDALQTADKHSFFKFMVKSVAEKHGL
RATFMPKPFKGLTGNGCHAHISVWDIDGKVNAFADKEMAFGLSAQGKTFLGGIMKHAS
ALAAITNPTVNSYKRINAPRTTSGATWAPNTVTWTGNNRTHMVRVPGPGRFELRLPDG
AVNPYLLQAIIIAAGLDGIRSQADPGRHYDIDMYAEGYLVKDAPRLPLNLLDALRAYD
ADEGLKQAIGAEFSAAYLKLKHQEWNAFCSHFTQWERDSTLDI"
misc_feature 3924..5213
/locus_tag="Rleg_6578"
/note="glutamine synthetase, type III; Region:
gln_synth_III; TIGR03105"
/db_xref="CDD:163137"
misc_feature 4209..4958
/locus_tag="Rleg_6578"
/note="Glutamine synthetase, catalytic domain; Region:
Gln-synt_C; pfam00120"
/db_xref="CDD:201016"
gene 5412..6296
/gene="purU"
/locus_tag="Rleg_6579"
/db_xref="GeneID:8022829"
CDS 5412..6296
/gene="purU"
/locus_tag="Rleg_6579"
/inference="protein motif:TFAM:TIGR00655"
/note="produces formate from formyl-tetrahydrofolate which
is the major source of formate for PurT in de novo purine
nucleotide biosynthesis; has a role in one-carbon
metabolism; forms a homohexamer; activated by methionine
and inhibited by glycine"
/codon_start=1
/transl_table=11
/product="formyltetrahydrofolate deformylase"
/protein_id="YP_002984582.1"
/db_xref="GI:241666498"
/db_xref="InterPro:IPR002376"
/db_xref="InterPro:IPR002912"
/db_xref="InterPro:IPR004810"
/db_xref="GeneID:8022829"
/translation="MKSFVLTVSCKSTRGIVAAISSYLADKGCNIIDSSQFDDLDTGK
FFMRVSFISEEGLSGADIDAGFATVAAPFEMDYDFHDSEKRMKVLLMVSRFGHCLNDL
LYRWKIGALPIDIVGVVSNHFDYQKVVVNHDIPFHHIPVTKANRVQAEGHIMDVVEQT
GTELIVLARYMQILSDEMCQKMSGKIINIHHSFLPSFKGANPYKQAYQRGVKLIGATA
HYVTADLDEGPIIEQDTARITHAQSPDDYVSIGRDVESQVLARAIHAHIHHRTFINGN
RTVVFPASPGSYASERMG"
misc_feature 5412..6257
/gene="purU"
/locus_tag="Rleg_6579"
/note="formyltetrahydrofolate deformylase; Reviewed;
Region: PRK13011"
/db_xref="CDD:183839"
misc_feature 5424..5642
/gene="purU"
/locus_tag="Rleg_6579"
/note="N-terminal ACT domain of formyltetrahydrofolate
deformylase (F4HF-DF; formyltetrahydrofolate hydrolase);
Region: ACT_F4HF-DF; cd04875"
/db_xref="CDD:153147"
misc_feature 5667..6254
/gene="purU"
/locus_tag="Rleg_6579"
/note="Formyltetrahydrofolate deformylase (Formyl-FH4
hydrolase), C-terminal hydrolase domain; Region:
FMT_core_Formyl-FH4-Hydrolase_C; cd08648"
/db_xref="CDD:187717"
misc_feature order(5685..5687,5700..5705,5910..5933,5946..5948,
5973..5984,6006..6008,6066..6068,6072..6077,6084..6089)
/gene="purU"
/locus_tag="Rleg_6579"
/note="putative active site [active]"
/db_xref="CDD:187717"
misc_feature order(5700..5705,5913..5918,5976..5978,5982..5984,
6174..6176)
/gene="purU"
/locus_tag="Rleg_6579"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:187717"
misc_feature order(5910..5912,5919..5921,5925..5933,5946..5948,
5973..5975,6072..6077,6084..6089)
/gene="purU"
/locus_tag="Rleg_6579"
/note="putative cosubstrate binding site; other site"
/db_xref="CDD:187717"
misc_feature order(5973..5975,5979..5981,6087..6089)
/gene="purU"
/locus_tag="Rleg_6579"
/note="catalytic site [active]"
/db_xref="CDD:187717"
gene 6446..7579
/locus_tag="Rleg_6580"
/db_xref="GeneID:8022830"
CDS 6446..7579
/locus_tag="Rleg_6580"
/inference="protein motif:PFAM:PF01571"
/note="PFAM: glycine cleavage T protein (aminomethyl
transferase); Glycine cleavage T-protein barrel;
KEGG: aminomethyltransferase protein ; K00605
aminomethyltransferase"
/codon_start=1
/transl_table=11
/product="glycine cleavage T protein (aminomethyl
transferase)"
/protein_id="YP_002984583.1"
/db_xref="GI:241666499"
/db_xref="InterPro:IPR006222"
/db_xref="InterPro:IPR013977"
/db_xref="GeneID:8022830"
/translation="MALSWRFSVLADRHRALGSKLEDWSGMGTAWTYDKDMSEEHVAV
RTKAGIMDVSGLKKVHLVGPHAIAVLDSITSRDLTKIYPGRSVYATMLNERGHFTDDC
IVYRTGPNSWMLVHGSGSGHEELVKQAAGRNCAVLFDDDLHDLSLQGPLAVDYLAKYV
PGIRDLKYFHHMQTTLFGAPVMISRTGYTGERGYEIFVRGQDAVMVWDRIVEEGKEMG
IIPCCFSVLDMLRVESYLLFYPYDNSQMYPFADQPPGDSLWELGLDFTVSPGKTGFRG
AEEHARLKGKERFKIFGMLIDADGPADLGDEVFADGKKVGVITCPSYSSLTKKSMAIA
RLDVDKAVHGTKLEVRGKTVKASATAHTLPFDDPEKKKRIAVG"
misc_feature 6446..7570
/locus_tag="Rleg_6580"
/note="Glycine cleavage system T protein
(aminomethyltransferase) [Amino acid transport and
metabolism]; Region: GcvT; COG0404"
/db_xref="CDD:30753"
misc_feature 7262..7528
/locus_tag="Rleg_6580"
/note="Glycine cleavage T-protein C-terminal barrel
domain; Region: GCV_T_C; pfam08669"
/db_xref="CDD:204020"
gene 7591..8196
/locus_tag="Rleg_6581"
/db_xref="GeneID:8022831"
CDS 7591..8196
/locus_tag="Rleg_6581"
/inference="similar to AA sequence:KEGG:RHE_PE00414"
/note="KEGG: ret:RHE_PE00414 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984584.1"
/db_xref="GI:241666500"
/db_xref="GeneID:8022831"
/translation="MLVAGIKSRPVYTGLTIQPNARRHIFALEGEGARALLDQQPALD
ETALARSEILYVARGSQGTGLDETLRHLGADMFFTAPTISTLLFRLKGSLATAHMGTR
LYLSGTEGFIGQAMLVALDYGMDHASVITEHRGSLARRVQCVHCKGITDDVTTSPFAC
SHCGLPLLVRDHYSRRLAAFQGVNIDAEEPGSAPDPEELFL"
gene 8193..9158
/locus_tag="Rleg_6582"
/db_xref="GeneID:8022832"
CDS 8193..9158
/locus_tag="Rleg_6582"
/inference="protein motif:PFAM:PF00111"
/note="PFAM: ferredoxin; Oxidoreductase FAD-binding domain
protein; oxidoreductase FAD/NAD(P)-binding domain protein;
KEGG: ret:RHE_PE00413 ferredoxin protein"
/codon_start=1
/transl_table=11
/product="ferredoxin"
/protein_id="YP_002984585.1"
/db_xref="GI:241666501"
/db_xref="InterPro:IPR000951"
/db_xref="InterPro:IPR001041"
/db_xref="InterPro:IPR001433"
/db_xref="InterPro:IPR006058"
/db_xref="InterPro:IPR008333"
/db_xref="GeneID:8022832"
/translation="MSGGTEIPVRVVRITPIAERVKRFRFERLDGKPMPYFSGGAHVI
VLMNDGGHMRRNAYSLMSPPHDCAAYEISVLHVENSRGGSTFMHEKVSEGDELKVSYP
VNLFQPDWRGRKHLLIAGGIGITPFIAMMEQFSREGANFELHYAIRTRDRGAYWQHLV
ARYGGHRIKIYCDAEGGAMPLTRLLGTQPLGTHLYVCGPSGMIDGVLKSGLDAGWPEQ
NLHSERFLSSLPGKPFAIELLRSGKTVKVGHHESMLEAIEAAGVDAPFLCRGGACGQC
ETGVVTCDGKLLHHDVYLTNEEKASGRKVMICVSRFEGNTLHLDL"
misc_feature 8211..8966
/locus_tag="Rleg_6582"
/note="Flavodoxin reductases (ferredoxin-NADPH reductases)
family 1 [Energy production and conversion]; Region: Hmp;
COG1018"
/db_xref="CDD:31221"
misc_feature 8226..8867
/locus_tag="Rleg_6582"
/note="Phthalate dioxygenase reductase (PDR) is an
FMN-dependent reductase that mediates electron transfer
from NADH to FMN to an iron sulfur cluster. PDR has an an
N-terminal ferrredoxin reductase (FNR)-like NAD(H)
binding domain and a C-terminal iron-sulfur; Region:
PDR_like; cd06185"
/db_xref="CDD:99782"
misc_feature order(8358..8363,8367..8369,8409..8417,8433..8435,
8439..8444,8565..8567,8865..8867)
/locus_tag="Rleg_6582"
/note="FMN-binding pocket [chemical binding]; other site"
/db_xref="CDD:99782"
misc_feature order(8358..8360,8364..8369)
/locus_tag="Rleg_6582"
/note="flavin binding motif; other site"
/db_xref="CDD:99782"
misc_feature order(8433..8435,8442..8444,8451..8453,8472..8474)
/locus_tag="Rleg_6582"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99782"
misc_feature order(8541..8543,8553..8564,8568..8570)
/locus_tag="Rleg_6582"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99782"
misc_feature order(8556..8561,8628..8636,8784..8789)
/locus_tag="Rleg_6582"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99782"
misc_feature 8898..9125
/locus_tag="Rleg_6582"
/note="2Fe-2S iron-sulfur cluster binding domain.
Iron-sulfur proteins play an important role in electron
transfer processes and in various enzymatic reactions. The
family includes plant and algal ferredoxins, which act as
electron carriers in photosynthesis...; Region: fer2;
cd00207"
/db_xref="CDD:29262"
misc_feature order(8982..8987,8994..8996,9003..9005,9009..9020,
9111..9116)
/locus_tag="Rleg_6582"
/note="catalytic loop [active]"
/db_xref="CDD:29262"
misc_feature order(8994..8996,9009..9011,9018..9020,9114..9116)
/locus_tag="Rleg_6582"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:29262"
gene 9190..10230
/locus_tag="Rleg_6583"
/db_xref="GeneID:8022833"
CDS 9190..10230
/locus_tag="Rleg_6583"
/inference="similar to AA sequence:KEGG:RHE_PE00412"
/note="KEGG: ret:RHE_PE00412 hypothetical protein;
SNP /replace=G"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984586.1"
/db_xref="GI:241666502"
/db_xref="GeneID:8022833"
/translation="MAIVFKQETFRNDFSYRNSPENIRRFPFPFDRDEYMYSVNMEPH
VHGRAGTVYESLIDVDEHYVAEMHDRALVLKEDPLRYQALPHMMSAQWDTLELLMEEQ
AAGYPDHFTLIRNGDQWRWINRPLGIDDSFTFGDASTLPYEPFEYITRQAQGDFCIVD
QRDSNLWMDAGMVTTQADWSLDFDIGMNFMEWHGPVPLAHQIGVFDRALKFLLNLQQG
KPTRRFNWTMTINPRLDTSPENYHKWGPDRTTVTPDNVGEKVHLRVELQSLWRLPRSN
AILFVIRCYLMNMEELVTVPKWARRFPRVLKTLPPELIDYKGLTRFRETTIDWFSKYD
DGAPTSPGIYPD"
misc_feature 9346..10071
/locus_tag="Rleg_6583"
/note="Protein of unknown function (DUF3445); Region:
DUF3445; pfam11927"
/db_xref="CDD:204780"
gene 10271..11608
/locus_tag="Rleg_6584"
/db_xref="GeneID:8022834"
CDS 10271..11608
/locus_tag="Rleg_6584"
/inference="protein motif:PFAM:PF00743"
/note="PFAM: flavin-containing monooxygenase FMO;
KEGG: ret:RHE_PE00411 monooxygenase protein"
/codon_start=1
/transl_table=11
/product="flavin-containing monooxygenase FMO"
/protein_id="YP_002984587.1"
/db_xref="GI:241666503"
/db_xref="InterPro:IPR000960"
/db_xref="GeneID:8022834"
/translation="MTRVAVIGAGPSGLAQLRAFQSAAQKGAEIPEIVCFEKQSDWGG
LWNYTWRTGLDEYGEPVHGSMYRYLWSNGPKECLEFADYSFEEHFGKPIASYPPRAVL
WDYIKGRVEKANVRHWVRFSTPVRMVRFDDQTKKFTVTAHNRVEDRMYDEEFDYVVVA
SGHFSTPNVPYFEGVKTFNGRVLHAHDFRDALEFKGKDILLVGRSYSAEDIGSQCWKY
GAKSVTTSYRSKPMGFKWPENFEERPLLIKLENRTAHFLDGSTKEVDAVILCTGYQHH
FPFLPDELRLKTANRLWADSLYKGVIFDKNPQLFYIGMQDQFYTFNMFDVQAWWARDV
MMGRITLPPEEELKANFDMWRAREETLEDAEQMIWYQGDYVKELLAETDYPSFDIEGT
NQTFMEWEHHKAHNIMGFRDHAYRSLMTGNMSPTHHTPWVEALDDSMEEYLRN"
misc_feature 10271..11602
/locus_tag="Rleg_6584"
/note="Predicted flavoprotein involved in K+ transport
[Inorganic ion transport and metabolism]; Region: TrkA;
COG2072"
/db_xref="CDD:32255"
misc_feature 10283..10762
/locus_tag="Rleg_6584"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
gene 11721..12323
/locus_tag="Rleg_6585"
/db_xref="GeneID:8022835"
CDS 11721..12323
/locus_tag="Rleg_6585"
/inference="protein motif:TFAM:TIGR00229"
/note="TIGRFAM: PAS sensor protein;
PFAM: PAS fold-3 domain protein;
KEGG: ret:RHE_PE00410 putative chemotaxis protein"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis sensory transducer
with Pas/Pac sensor"
/protein_id="YP_002984588.1"
/db_xref="GI:241666504"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR004089"
/db_xref="InterPro:IPR004090"
/db_xref="InterPro:IPR013655"
/db_xref="GeneID:8022835"
/translation="MDFQTSILGRMSGFLYRCRADENYTMLEMTNGIERIFGYPVDEI
VGNRTRTFTSIMYEEDVPLMDEIVGRALEKRTDWTMEYRIRHAMGHLIWVTETGGGIW
NEKGELLYLEGSIINIESLYQRIDEQTSGMRVTASKTNEILQSLRYLKLLAVNAGIEA
ARAGTAGSGFAVLAAEMRTLANSSEEAARAISNAQRKAEG"
misc_feature 11772..12074
/locus_tag="Rleg_6585"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature 11799..12065
/locus_tag="Rleg_6585"
/note="PAS fold; Region: PAS_3; pfam08447"
/db_xref="CDD:203948"
misc_feature order(11805..11807,11817..11819,11835..11837,11883..11894,
11970..11972,11985..11987)
/locus_tag="Rleg_6585"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(11874..11876,11886..11888,11910..11912,11919..11924,
12006..12008,12012..12014)
/locus_tag="Rleg_6585"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature <12051..>12299
/locus_tag="Rleg_6585"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cd11386"
/db_xref="CDD:206779"
misc_feature order(12132..12140,12171..12263)
/locus_tag="Rleg_6585"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene 12533..13252
/gene="minC"
/locus_tag="Rleg_6586"
/db_xref="GeneID:8022836"
CDS 12533..13252
/gene="minC"
/locus_tag="Rleg_6586"
/inference="protein motif:TFAM:TIGR01222"
/note="blocks the formation of polar Z-ring septums"
/codon_start=1
/transl_table=11
/product="septum formation inhibitor"
/protein_id="YP_002984589.1"
/db_xref="GI:241666505"
/db_xref="InterPro:IPR005526"
/db_xref="InterPro:IPR013033"
/db_xref="GeneID:8022836"
/translation="MTKVLTDARSIRIKGRSFLAVMLSPDLPIDDWLIRLDDLAARSA
GFFLGRPVVLDLTDLQIDRPQLKDLIAELAKRNVSIMGIEGARPSILGSGMPPALKGG
RSVSDIEVQAKEPADLPGKPAAAEARPAMQSIVIREPVRSGQSVIFPEGDVTVIGSVA
SGAEVIAGGSVHIYGALRGRAMAGSIGNASARIFCRKLEAELVAIDGIYKMAEDMAAN
LRGQAVQLWLEDDAIMAEKLI"
misc_feature 12533..13249
/gene="minC"
/locus_tag="Rleg_6586"
/note="septum formation inhibitor; Reviewed; Region: minC;
PRK05177"
/db_xref="CDD:179954"
misc_feature 12932..13246
/gene="minC"
/locus_tag="Rleg_6586"
/note="Septum formation inhibitor MinC, C-terminal domain;
Region: MinC_C; pfam03775"
/db_xref="CDD:146423"
gene 13335..14153
/locus_tag="Rleg_6587"
/db_xref="GeneID:8022837"
CDS 13335..14153
/locus_tag="Rleg_6587"
/inference="protein motif:TFAM:TIGR01968"
/note="TIGRFAM: septum site-determining protein MinD;
PFAM: Cobyrinic acid ac-diamide synthase;
KEGG: ret:RHE_PE00408 cell division inhibitor MinD
protein"
/codon_start=1
/transl_table=11
/product="septum site-determining protein MinD"
/protein_id="YP_002984590.1"
/db_xref="GI:241666506"
/db_xref="InterPro:IPR002586"
/db_xref="InterPro:IPR010223"
/db_xref="GeneID:8022837"
/translation="MMGKVIVVTSGKGGVGKTTSTAALGAALAQRNEKVVVVDFDVGL
RNLDLVMGAERRVVYDLINVIQGDAKLTQALIRDKRLETLFLLPASQTRDKDNLTAEG
VERVINDLKRYFDWIICDSPAGIERGATLAMRHADVAVVVTNPEVSSVRDSDRIIGLL
DAKTAKAERGERMEKHLLLTRYDANRAERGDMLKVDDVLEILSIPLLGIIPESMDVLR
ASNIGAPVTLADSRSAAAMAYFDAARRLAGEVVPIAIPEEKRNIFGKIFGRRAA"
misc_feature 13422..14150
/locus_tag="Rleg_6587"
/note="Septum formation inhibitor-activating ATPase [Cell
division and chromosome partitioning]; Region: MinD;
COG2894"
/db_xref="CDD:32719"
misc_feature 13422..14018
/locus_tag="Rleg_6587"
/note="Bacterial cell division requires the formation of a
septum at mid-cell. The site is determined by the min
operon products MinC, MinD and MinE. MinC is a nonspecific
inhibitor of the septum protein FtsZ. MinE is the
supressor of MinC. MinD plays a pivotal...; Region: MinD;
cd02036"
/db_xref="CDD:73299"
misc_feature 13449..13457
/locus_tag="Rleg_6587"
/note="Switch I; other site"
/db_xref="CDD:73299"
misc_feature 13692..13706
/locus_tag="Rleg_6587"
/note="Switch II; other site"
/db_xref="CDD:73299"
gene 14150..14410
/gene="minE"
/locus_tag="Rleg_6588"
/db_xref="GeneID:8022838"
CDS 14150..14410
/gene="minE"
/locus_tag="Rleg_6588"
/inference="protein motif:TFAM:TIGR01215"
/note="works in conjunction with MinC and MinD to enable
cell division at the midpoint of the long axis of the
cell"
/codon_start=1
/transl_table=11
/product="cell division topological specificity factor
MinE"
/protein_id="YP_002984591.1"
/db_xref="GI:241666507"
/db_xref="InterPro:IPR005527"
/db_xref="GeneID:8022838"
/translation="MNIFRLFNKQRTAPAARERLQVLLAHERSSAGSDLVSLLREEIL
AVIAKHVQLDHDKVQVTIDRNEYVSTLEIDVEIPLNAAVQAA"
misc_feature 14150..14398
/gene="minE"
/locus_tag="Rleg_6588"
/note="cell division topological specificity factor MinE;
Reviewed; Region: minE; PRK00296"
/db_xref="CDD:178966"
gene complement(14452..14832)
/locus_tag="Rleg_6589"
/db_xref="GeneID:8022839"
CDS complement(14452..14832)
/locus_tag="Rleg_6589"
/inference="similar to AA sequence:KEGG:Arad_9411"
/note="KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984592.1"
/db_xref="GI:241666508"
/db_xref="GeneID:8022839"
/translation="MKNAKNNELSDRRSAAAEAKAALLNAYRSAKDSAEPTRLAKQAE
RQAIAAAREERRAQRERVKLEELERAQAAEAERQAAAEAAARADADAREAADKERIAR
VIADEAARKAERDLRYANRKARKS"
gene complement(14968..15192)
/locus_tag="Rleg_6590"
/db_xref="GeneID:8022840"
CDS complement(14968..15192)
/locus_tag="Rleg_6590"
/inference="similar to AA sequence:KEGG:Arad_9410"
/note="KEGG: hypothetical protein;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984593.1"
/db_xref="GI:241666509"
/db_xref="GeneID:8022840"
/translation="MTESHSKSRKQAEIAFGNAQSQFLARSRAVEEIDSTIRAREEKT
LRLREAREAKELQDRLTGGTAPSAKRKKKI"
gene complement(15321..15530)
/locus_tag="Rleg_6591"
/db_xref="GeneID:8022841"
CDS complement(15321..15530)
/locus_tag="Rleg_6591"
/inference="protein motif:PFAM:PF00313"
/note="PFAM: Cold-shock protein DNA-binding;
SMART: Cold shock protein;
KEGG: cold shock protein ; K03704 cold shock protein
(beta-ribbon, CspA family)"
/codon_start=1
/transl_table=11
/product="cold-shock DNA-binding domain protein"
/protein_id="YP_002984594.1"
/db_xref="GI:241666510"
/db_xref="InterPro:IPR002059"
/db_xref="InterPro:IPR011129"
/db_xref="GeneID:8022841"
/translation="MTTGTVKWFNSTKGFGFIQPDDGGADAFVHISAVERAGMREIVE
GQKIGYELERDNKSGKMSACNLQAA"
misc_feature complement(15360..15524)
/locus_tag="Rleg_6591"
/note="Cold-Shock Protein (CSP) contains an S1-like
cold-shock domain (CSD) that is found in eukaryotes,
prokaryotes, and archaea. CSP's include the major
cold-shock proteins CspA and CspB in bacteria and the
eukaryotic gene regulatory factor Y-box protein; Region:
CSP_CDS; cd04458"
/db_xref="CDD:88424"
misc_feature complement(order(15360..15362,15447..15449,15480..15482,
15507..15509))
/locus_tag="Rleg_6591"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:88424"
misc_feature complement(order(15441..15452,15471..15491))
/locus_tag="Rleg_6591"
/note="RNA-binding motif; other site"
/db_xref="CDD:88424"
gene complement(15812..18181)
/locus_tag="Rleg_6592"
/db_xref="GeneID:8022842"
CDS complement(15812..18181)
/locus_tag="Rleg_6592"
/inference="protein motif:PFAM:PF01571"
/note="PFAM: glycine cleavage T protein (aminomethyl
transferase); Glycine cleavage T-protein barrel;
KEGG: ret:RHE_PE00406 aminomethyltransferase protein"
/codon_start=1
/transl_table=11
/product="glycine cleavage T protein (aminomethyl
transferase)"
/protein_id="YP_002984595.1"
/db_xref="GI:241666511"
/db_xref="InterPro:IPR006222"
/db_xref="InterPro:IPR013838"
/db_xref="InterPro:IPR013977"
/db_xref="GeneID:8022842"
/translation="MRELHPAMTGLRPAAPSLVHYPGISTLPEGTERYRAKGGGSVVV
RVEPGDGVIVIDSEGGQVCEISFLDEKGRFLAAGLGTAFSNSADGLKAILQAEDEGAA
RTRAALQRRGADLAKAGALSIFGSGSTPGSRAEFTISMKGLLIVAAPASAMSPEAQDT
ATPIEIRIKRSLLIRDYASALPEPAADPVEDIRIRAATAAAYFVRAGEFIQIIDVYGR
QCTDFQAFAARKVDKGLDLALDSTVTRTLLGRSYPMPGLPSKAFDRDFEPLVEIVQDT
VGRHDAFATACNSRYYDDMGYPGHVNCTDNFNAVLAPYGIAGRKGWEALNYFYNTNID
HNNQLYLDEPWSRPGDYVLMRALTDLVCVSSSCPDDIDAANGWDPTDIHVRTFSGKEK
FSRAVAYRMTPDADAELTRETAFHPRLSALTRDYTEYRGYWLPNRFSSEGPVEEYWAC
RERAAVIDLSPLRKFEVTGPDAEELLQYCLTRDVRKLSTGQVVYSAMCYENGGMIDDG
TLFRLGDKNFRWIGGDDFSGIWLRQQAEKKGFKAWVRSSTDQMHNIALQGPKSRDILK
EIIWTAPRQPTIGELEWFRFTVGRIGGFEGAPIVVSRTGYTGELGYEIFCHPKDALTV
FDAVWEAGQPHGLKPMGLEALDMVRIEAGLIFAHHEFTDQTDPFEAGIGFTVPLKSKQ
DDFIGREALIRRKEHPRHLLVGLDIKSNEAVGHGDCIHIGRAQVGVVTSATRSPVLGK
TIALARIDVMHANPGTEVEVGKLDGHQKRLPATIVPLSHYDPQKTLPRS"
misc_feature complement(16958..17797)
/locus_tag="Rleg_6592"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG3665"
/db_xref="CDD:33463"
misc_feature complement(15815..16966)
/locus_tag="Rleg_6592"
/note="Glycine cleavage system T protein
(aminomethyltransferase) [Amino acid transport and
metabolism]; Region: GcvT; COG0404"
/db_xref="CDD:30753"
misc_feature complement(15851..16135)
/locus_tag="Rleg_6592"
/note="Glycine cleavage T-protein C-terminal barrel
domain; Region: GCV_T_C; pfam08669"
/db_xref="CDD:204020"
gene 18432..20216
/locus_tag="Rleg_6593"
/db_xref="GeneID:8022843"
CDS 18432..20216
/locus_tag="Rleg_6593"
/inference="protein motif:PFAM:PF00324"
/note="PFAM: amino acid permease-associated region;
KEGG: ret:RHE_PE00405 amino acid transporter, permease
protein"
/codon_start=1
/transl_table=11
/product="amino acid permease-associated region"
/protein_id="YP_002984596.1"
/db_xref="GI:241666512"
/db_xref="InterPro:IPR004841"
/db_xref="GeneID:8022843"
/translation="MTDVVEAGIVSGTEGKLVRALDWKGAFWVAAGVPPLVLFSIGGI
AGTTGKLAFVVWIISMVMGFLQSFTYAEIAGMFANKSGGASVYGATAWLRYSKFIAPL
SVWCNWFAWSPVLSLGCAIAAGYILNAFYPIPAADSQMVLDWISAHAASITADSPRVA
EYIAAHTGTTPDDAVKALLGTDGIAALTPAIRSWSLLSFNIPFLATANINATFFIGGM
LMLIIFAIQHRGISETASVQKWLAIIVLVPLLIIGLYPIVSGQILATNVTGLVPPTAA
YAAADGTWSNGGWTLFLGGLYIAAWSTYGFETAVCYTRELKNPKTDTFKAIFYSGLAC
CLFFFLVPFAFQGVLGHAGMLAPGIVDGTGVAEALGGLIGAGRIVTQLLVVLMIMALF
LAIMTAMAGSSRTLYQGSKDGWLPKYLDHVNEHGAPTRAMWTDFAFNLFLLAIASDVG
GYFFVLAVSNVGYIIFNFLNLNSGWIHRMDSGHIERPWKAPTWLIGLNTVLAFVNALF
LGAGAKVWGYSNALWVGFIFAALILPVFAYRHYVRDGGKFPAGAMEDLGLVGQDLGVK
KAGMLPYLALAGGLAIVLIANVIFQLPA"
misc_feature <18978..20039
/locus_tag="Rleg_6593"
/note="Amino acid permease; Region: AA_permease_2;
pfam13520"
/db_xref="CDD:205698"
gene complement(20374..21405)
/locus_tag="Rleg_6594"
/db_xref="GeneID:8022844"
CDS complement(20374..21405)
/locus_tag="Rleg_6594"
/inference="protein motif:PFAM:PF00248"
/note="PFAM: aldo/keto reductase;
KEGG: rec:RHECIAT_PA0000323 probable alcohol dehydrogenase
protein"
/codon_start=1
/transl_table=11
/product="aldo/keto reductase"
/protein_id="YP_002984597.1"
/db_xref="GI:241666513"
/db_xref="InterPro:IPR001395"
/db_xref="InterPro:IPR002345"
/db_xref="GeneID:8022844"
/translation="MDYRKLGPSGTVVTAYCLGTMTFGAEADEAASHKLLDDYFAWGG
NFIDTADVYSAGKSEEIIGRWLKARPTEARQAIVATKGRFPMGNGPNDIGLSRRHLSQ
ALDDSLRRLDLEQIDLYQMHAWDALTPIEETLRFLDDAVSSGKIGYYGFSNYVGWHIA
KASEIAKARGYTRPVTLQPQYNLLVREIELEIVAACQDAGMGLLPWSPLGGGWLTGKY
KRDEMPTGATRLGENPNRGGESYAPRNALERTWAIIGVVEEIAKVHGVSMAQVALAWT
AAQPAITSVILGARTPEQLADNLGAMKLKLSDDEMARLNDVSAPQPFDYPYGKGGINQ
RHRKIEGGR"
misc_feature complement(20428..21405)
/locus_tag="Rleg_6594"
/note="Predicted oxidoreductases (related to aryl-alcohol
dehydrogenases) [Energy production and conversion];
Region: Tas; COG0667"
/db_xref="CDD:31011"
sig_peptide complement(21322..21405)
/locus_tag="Rleg_6594"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.939) with cleavage site probability 0.897 at
residue 28"
misc_feature complement(20455..21399)
/locus_tag="Rleg_6594"
/note="Aldo-keto reductases (AKRs) are a superfamily of
soluble NAD(P)(H) oxidoreductases whose chief purpose is
to reduce aldehydes and ketones to primary and secondary
alcohols. AKRs are present in all phyla and are of
importance to both health and industrial...; Region:
Aldo_ket_red; cd06660"
/db_xref="CDD:119408"
misc_feature complement(order(20512..20517,20524..20526,20539..20550,
20599..20601,20773..20790,20872..20874,20947..20952,
21037..21042,21163..21165,21247..21249,21262..21264,
21343..21351))
/locus_tag="Rleg_6594"
/note="active site"
/db_xref="CDD:119408"
misc_feature complement(order(21040..21042,21163..21165,21247..21249,
21262..21264))
/locus_tag="Rleg_6594"
/note="catalytic tetrad [active]"
/db_xref="CDD:119408"
gene complement(21637..22908)
/locus_tag="Rleg_6595"
/db_xref="GeneID:8022845"
CDS complement(21637..22908)
/locus_tag="Rleg_6595"
/inference="protein motif:PFAM:PF01593"
/note="PFAM: amine oxidase; FAD dependent oxidoreductase;
KEGG: ret:RHE_PE00403 putative amine oxidase protein"
/codon_start=1
/transl_table=11
/product="amine oxidase"
/protein_id="YP_002984598.1"
/db_xref="GI:241666514"
/db_xref="InterPro:IPR002937"
/db_xref="InterPro:IPR006076"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:8022845"
/translation="MPGDNSKGADEDVVIIGAGAAGIAAARRLQAIRPDLSILLLEAG
DRLGGRAWTVGLPEAADIGLDLGCGWLHGARTNAWTAIAGEVGLTVDHTPAPWNDGGR
RLQRDDAEARAARQAIGAYFERLESHAGNDAAMADMLEPGNPWNGQIRAVGTYITGAE
LERSSVVDYNRYDPGPGPDWRVREGYGTLVSLYGKPVRARLGTEVTRIDHRHAGRIGI
ETNQGVLTARAVLVTVSTNVLAAGKIAFDPPLPDKIEAAARLPLGLADKLFLRLTNRE
ALPADTHMLGSNSRGATGTYQLRPFGAPVVEAYFAGDLAHHLEGQGREAAFSFAADEL
AAHFGADIRKELSVAAMSAWAAAPHIGGSYSYAEPGASDLRGRLATPHEERIFFAGEA
CSTSRYSTAHGAYETGVAAADRIAGSFWQNP"
misc_feature complement(21658..22800)
/locus_tag="Rleg_6595"
/note="Monoamine oxidase [Amino acid transport and
metabolism]; Region: COG1231"
/db_xref="CDD:31424"
gene complement(22972..23394)
/locus_tag="Rleg_6596"
/db_xref="GeneID:8022846"
CDS complement(22972..23394)
/locus_tag="Rleg_6596"
/inference="protein motif:PFAM:PF01047"
/note="PFAM: regulatory protein MarR;
SMART: regulatory protein MarR;
KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="MarR family transcriptional regulator"
/protein_id="YP_002984599.1"
/db_xref="GI:241666515"
/db_xref="InterPro:IPR000835"
/db_xref="GeneID:8022846"
/translation="MSSSSLGLLLRLVHQHWTQAVEAALDEAGYGDIRPPHANVFTFA
RPEGIQVSELTKLARVRKQTMTQAVEELERLGYVERRPDPTDRRGRLVFLTEKGQGVR
PIAMAAGRRVDESWAALTSQQQMDDLRTALQRLLEQLQ"
misc_feature complement(23131..23301)
/locus_tag="Rleg_6596"
/note="MarR family; Region: MarR_2; pfam12802"
/db_xref="CDD:205082"
gene 23485..24375
/locus_tag="Rleg_6597"
/db_xref="GeneID:8022847"
CDS 23485..24375
/locus_tag="Rleg_6597"
/inference="protein motif:PFAM:PF00561"
/note="catalyzes the cleavage of carbon-halogen bonds in
aliphatic compounds forming a primary alcohol and a
halide"
/codon_start=1
/transl_table=11
/product="haloalkane dehalogenase"
/protein_id="YP_002984600.1"
/db_xref="GI:241666516"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="InterPro:IPR002410"
/db_xref="InterPro:IPR003089"
/db_xref="GeneID:8022847"
/translation="MPTIDILNSFISYEELGEGDPIVFLHGNPTSSHLWRNIMPGIGP
GRYLAPDLIGMGRSGKPDIGYRYGDHIAYLDAWFDALDLDDVVLVGHDWGGALAFDWA
SRHVEQVRGIAFMETILRPMGWYDLPGGGKARYELLRGAGTGETKVLDENFFIEQALR
ATTLKGLSDADWDVYRAPYPDRNSRRPLLEWPRAMPINGEPADVVARIEAYDRWLCAS
PQTPKLLLTFDGPSETLLIGSEMISWCRDNIAGLEIRGCGPARHIAPEDQPEAIAAEI
KSWIDRKGLRTAQRKVASQT"
misc_feature 23485..24351
/locus_tag="Rleg_6597"
/note="haloalkane dehalogenase; Provisional; Region:
PRK03592"
/db_xref="CDD:179601"
gene 24471..24734
/locus_tag="Rleg_6598"
/db_xref="GeneID:8022848"
CDS 24471..24734
/locus_tag="Rleg_6598"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: ret:RHE_CH00448 phospholipid
N-methyltransferase protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984601.1"
/db_xref="GI:241666517"
/db_xref="GeneID:8022848"
/translation="MPRFDRRRFLLAWLRAPLCIASITPSGPRLAGLTYGPKCSVPIE
ILDSLGLVSKRIDWTLRNIPPAAVYRISRRYQPMALIEQRRAS"
sig_peptide 24471..24566
/locus_tag="Rleg_6598"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.976) with cleavage site probability 0.972 at
residue 32"
misc_feature <24543..24689
/locus_tag="Rleg_6598"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cl16911"
/db_xref="CDD:213141"
gene 24870..25544
/locus_tag="Rleg_6599"
/db_xref="GeneID:8022849"
CDS 24870..25544
/locus_tag="Rleg_6599"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; transcriptional
regulator domain protein;
SMART: response regulator receiver;
KEGG: mlo:mll5373 two-component response regulator"
/codon_start=1
/transl_table=11
/product="two component transcriptional regulator, winged
helix family"
/protein_id="YP_002984602.1"
/db_xref="GI:241666518"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:8022849"
/translation="MRILLIEDEPQMAVALRGALTRHDMVMDHVSTLCDAEMVIGDGA
YDAVLLDRQLPDGDGLELIPKIRKKGLTLPIIVITAKGEVPDRITGLETGADDYLAKP
FVFDELLARLRAVMRRSETLRPALISIGRLSFDPTYCDIIVSGLRLEMPRREALVLEC
LMRRAGRMVPRPALMEAVFGFDDEIQSNALDSHISRLRRKLAASQAGVVINVIRGVGY
LLREAS"
misc_feature 24870..25535
/locus_tag="Rleg_6599"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature 24879..25217
/locus_tag="Rleg_6599"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(24888..24893,25020..25022,25044..25046,25104..25106,
25161..25163,25170..25175)
/locus_tag="Rleg_6599"
/note="active site"
/db_xref="CDD:29071"
misc_feature 25020..25022
/locus_tag="Rleg_6599"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(25029..25034,25038..25046)
/locus_tag="Rleg_6599"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 25170..25178
/locus_tag="Rleg_6599"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 25248..25529
/locus_tag="Rleg_6599"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature order(25320..25322,25377..25382,25434..25436,25443..25445,
25467..25472,25503..25505,25518..25520)
/locus_tag="Rleg_6599"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 25541..26917
/locus_tag="Rleg_6600"
/db_xref="GeneID:8022850"
CDS 25541..26917
/locus_tag="Rleg_6600"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
histidine kinase HAMP region domain protein; histidine
kinase A domain protein;
SMART: ATP-binding region ATPase domain protein; histidine
kinase A domain protein;
KEGG: bja:blr4803 two-component hybrid sensor and
regulator"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_002984603.1"
/db_xref="GI:241666519"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:8022850"
/translation="MSKRCSYSLRKRLFWRLLAVQSVVLILVMIVLISVGKISEFRST
EGTIEVLGQAVFRQPTGELSLRETEDLRQLRKDAPDLWYTIRDLQGHVLTEGLVPEEY
AAIGNTLDHVGQAKFGSNLDDHDRPAARMKWIATDGGQLQFLTGTGPNSSTFILLKLS
LVLAKIVIPIVAVMALGALIATPLVVRRSLVGIDQAALQADTIDIDQRGGRLSENDTP
EEIAPLVHAVNRALGRLDEGYERQERFLTDAAHELRTPIAILNTRIGSLPHSSIKTDL
LEDAARLAVLTEQMLDLQRLKQGKVQFIKIDLGQLARKVIIEMAPLAFAAGYTVQFDV
DGAGEIEGDPLALQRALMNILQNAINHGGRKGIISLTSGCNWIEVSDEGPGIPADMED
RIFEPFFKRHHDGRGAGLGLNLVRDILRMHGGEVTINNRSPGAVCRLRFPPDKSAGVY
TPSHLATA"
sig_peptide 25541..25651
/locus_tag="Rleg_6600"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.604) with cleavage site probability 0.546 at
residue 37"
misc_feature 25712..25855
/locus_tag="Rleg_6600"
/note="Src Homology 3 domain superfamily; Region: SH3;
cl17036"
/db_xref="CDD:213143"
misc_feature order(25712..25714,25724..25726,25781..25786,25835..25837,
25841..25846)
/locus_tag="Rleg_6600"
/note="peptide ligand binding site [polypeptide binding];
other site"
/db_xref="CDD:212690"
misc_feature 26258..26425
/locus_tag="Rleg_6600"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(26273..26275,26285..26287,26297..26299,26306..26308,
26318..26320,26327..26329,26366..26368,26375..26377,
26387..26389,26396..26398,26408..26410)
/locus_tag="Rleg_6600"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 26291..26293
/locus_tag="Rleg_6600"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 26579..26863
/locus_tag="Rleg_6600"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(26597..26599,26609..26611,26618..26620,26675..26677,
26681..26683,26687..26689,26693..26698,26765..26776,
26822..26824,26825..26827,26840..26845,26849..26851)
/locus_tag="Rleg_6600"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 26609..26611
/locus_tag="Rleg_6600"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(26687..26689,26693..26695,26765..26767,26771..26773)
/locus_tag="Rleg_6600"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 27116..28096
/locus_tag="Rleg_6601"
/db_xref="GeneID:8022851"
CDS 27116..28096
/locus_tag="Rleg_6601"
/inference="protein motif:PFAM:PF00929"
/note="3'-5' exonuclease of DNA polymerase III"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit epsilon"
/protein_id="YP_002984604.1"
/db_xref="GI:241666520"
/db_xref="InterPro:IPR006055"
/db_xref="InterPro:IPR013520"
/db_xref="GeneID:8022851"
/translation="MSVHRDSQLDMFAKASPVTAKARGPARRRPSQPVVHSDENMARA
LEESGNYRILRKLVARPIASVKRPGFSRLGVILDTETTGLNHRSDEIIEIGAVAFTFN
DDGAIGDIVGIYGGLQQPSRPIPPEITRLTGITDAMVEGQLIDIQSLRTLIEPADLII
AHNAGFDRPFCEAFSKIFTGKAWACSVSEIDWSARGFEGTKLGYLVGQAGYFHEGHRA
VDDCHALLEILDREQHDGESPFTELYRASQRSRIRVFAEHSPFEMKDHLKARGYRWSD
GSDGRLKSWWIEVGEEDLNDELSYLRSDIYRWAEAEPPMVRLTAFDRFKL"
misc_feature 27221..28090
/locus_tag="Rleg_6601"
/note="DNA polymerase III subunit epsilon; Validated;
Region: PRK09182"
/db_xref="CDD:181680"
misc_feature 27338..27802
/locus_tag="Rleg_6601"
/note="DEDDh 3'-5' exonuclease domain family; Region:
DEDDh; cd06127"
/db_xref="CDD:176648"
misc_feature order(27347..27358,27362..27364,27599..27604,27608..27616,
27761..27763,27776..27778)
/locus_tag="Rleg_6601"
/note="active site"
/db_xref="CDD:176648"
misc_feature order(27347..27358,27362..27364,27599..27604,27608..27613,
27761..27763,27776..27778)
/locus_tag="Rleg_6601"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176648"
misc_feature order(27347..27349,27353..27355,27614..27616,27761..27763,
27776..27778)
/locus_tag="Rleg_6601"
/note="catalytic site [active]"
/db_xref="CDD:176648"
gene 28280..28426
/locus_tag="Rleg_6602"
/db_xref="GeneID:8022852"
CDS 28280..28426
/locus_tag="Rleg_6602"
/inference="protein motif:PFAM:PF06568"
/note="PFAM: protein of unknown function DUF1127;
KEGG: ret:RHE_PE00401 hypothetical protein;
SNP /replace=C;
SNP /replace=G;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984605.1"
/db_xref="GI:241666521"
/db_xref="InterPro:IPR009506"
/db_xref="GeneID:8022852"
/translation="MNVARSFNNWRKYRQTVAELGRMSARELDDLGIGRGDIRNVARA
AIAR"
misc_feature 28280..28396
/locus_tag="Rleg_6602"
/note="Domain of unknown function (DUF1127); Region:
DUF1127; pfam06568"
/db_xref="CDD:203477"
gene 29055..29891
/locus_tag="Rleg_6603"
/db_xref="GeneID:8022853"
CDS 29055..29891
/locus_tag="Rleg_6603"
/EC_number="5.3.1.17"
/inference="protein motif:PRIAM:5.3.1.17"
/note="4-deoxy-L-threo-5-hexosulose-uronate
ketol-isomerase; catalyzes the interconversion of
4-deoxy-L-threo-5-hexosulose uronate to
3-deoxy-D-glycero-2,5-hexodiulosonate"
/codon_start=1
/transl_table=11
/product="5-keto-4-deoxyuronate isomerase"
/protein_id="YP_002984606.1"
/db_xref="GI:241666522"
/db_xref="InterPro:IPR007045"
/db_xref="GeneID:8022853"
/translation="MQIDVRHASHPEAVRDFDTETLRRHFLVETVFASGEIRLTYSHY
DRMVIGGATPIGPGLTLTAPTAIGQETFLAERELGALNIGGAGRIIVDGTNYDLAKYD
CLYVGKGSKDIRFESTDTANPAKFYLVSTPAHQTHPTVLLTREKARHLTPGEAATANK
RSIYQFIHPEVCQSCQLTLGFTMIEPGSVWNTMPAHTHDRRMEAYLYFDLEAEQRVFH
FMGEPQQTRHMLVANEQAVISPPWSIHSGAGTKNYSFIWAMAGDNKSFTDMDHIAIAD
LR"
misc_feature 29061..29888
/locus_tag="Rleg_6603"
/note="5-keto-4-deoxyuronate isomerase; Provisional;
Region: PRK00924"
/db_xref="CDD:179169"
gene 29897..30652
/locus_tag="Rleg_6604"
/db_xref="GeneID:8022854"
CDS 29897..30652
/locus_tag="Rleg_6604"
/inference="protein motif:TFAM:TIGR01832"
/note="TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase;
PFAM: short-chain dehydrogenase/reductase SDR; KR domain
protein;
KEGG: rec:RHECIAT_PA0000318 putative 2-deoxy-D-gluconate
3-dehydrogenase protein"
/codon_start=1
/transl_table=11
/product="2-deoxy-D-gluconate 3-dehydrogenase"
/protein_id="YP_002984607.1"
/db_xref="GI:241666523"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR002424"
/db_xref="InterPro:IPR011286"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8022854"
/translation="MANPFDLSGRTAVVTGANTGLGQAIAAALAGAGASIVAVGRSSM
DETEALVKEAGGRFHVVKADLASIEPVKGIVTEAIQTFGGLDILVNNAGIIRRADALD
FTEEDWDAVIDVNLKTAFFLSQAAGRHMVDKGRGKIINIASLLSFQGGIRIPSYTASK
SGLAGLTKLLACEWAGKGVNVNAIAPGYFVTNNTTALREDADRNAAILSRIPAGRWGT
PSELGGAAVFLASSASDYVHGTVLPVDGGWLAR"
misc_feature 29909..30649
/locus_tag="Rleg_6604"
/note="2-deoxy-D-gluconate 3-dehydrogenase; Region: kduD;
TIGR01832"
/db_xref="CDD:188170"
misc_feature 29909..30646
/locus_tag="Rleg_6604"
/note="gluconate 5-dehydrogenase (Ga5DH)-like, classical
(c) SDRs; Region: Ga5DH-like_SDR_c; cd05347"
/db_xref="CDD:187605"
misc_feature order(29942..29944,29948..29959,30014..30022,30083..30091,
30167..30178,30236..30238,30317..30325,30362..30364,
30374..30376,30452..30463,30467..30478)
/locus_tag="Rleg_6604"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187605"
misc_feature order(30098..30100,30191..30205,30209..30211,30218..30223,
30230..30232,30245..30247,30254..30259,30266..30268,
30275..30277,30329..30337,30353..30358,30365..30370,
30377..30382,30389..30394,30398..30406,30410..30418)
/locus_tag="Rleg_6604"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187605"
misc_feature order(30239..30241,30323..30325,30362..30364,30374..30376)
/locus_tag="Rleg_6604"
/note="active site"
/db_xref="CDD:187605"
gene 30866..31606
/locus_tag="Rleg_6605"
/db_xref="GeneID:8022855"
CDS 30866..31606
/locus_tag="Rleg_6605"
/inference="protein motif:PFAM:PF07729"
/note="PFAM: GntR family transcriptional regulator;
regulatory protein GntR HTH;
SMART: regulatory protein GntR HTH;
KEGG: ret:RHE_PE00398 GntR family transcriptional
regulator;
SNP /replace=G"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_002984608.1"
/db_xref="GI:241666524"
/db_xref="InterPro:IPR000524"
/db_xref="InterPro:IPR011711"
/db_xref="GeneID:8022855"
/translation="MADKDNAVFNTIQQAPNLRSNLADMLTAQIESGDLKPGQRLPTE
QAIMIATGVSRTIVREALAALRAKGLITTRQGLGAFVSNDPTPRSFSIIPNDLQSIDE
VLRVLELRMGVEYEAAGLAALRRTQEDIDRMQDRLDALDKALEEGGYGAQEDYAFHRS
ILVATQNSYYGRLFDTFGNIMVPRQWARLDKMTSAERKRHAARMRREHHAIFAAIRDR
DEPAARRAIRSHLSKSAARFEELRDATA"
misc_feature 30902..31603
/locus_tag="Rleg_6605"
/note="Transcriptional regulators [Transcription]; Region:
FadR; COG2186"
/db_xref="CDD:32369"
misc_feature 30929..31111
/locus_tag="Rleg_6605"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature order(30989..30991,30995..31000,31022..31036,31040..31045,
31052..31054,31082..31087,31091..31102)
/locus_tag="Rleg_6605"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature 31181..31558
/locus_tag="Rleg_6605"
/note="This entry represents the C-terminal ligand binding
domain of many members of the GntR family; Region: FCD;
smart00895"
/db_xref="CDD:197963"
gene complement(31634..34918)
/locus_tag="Rleg_6606"
/db_xref="GeneID:8022856"
CDS complement(31634..34918)
/locus_tag="Rleg_6606"
/inference="similar to AA sequence:KEGG:RHE_PE00396"
/note="KEGG: ret:RHE_PE00396 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984609.1"
/db_xref="GI:241666525"
/db_xref="GeneID:8022856"
/translation="MATDLDRSFQMPRRDELGLFTISNGSGLSISALPNGTLFAIEYA
DDKGSVQINQIQGSPLTGGVSRLYLRIGGAAPDVVELVGSFADGSFGHDATSLSWSGK
RGDIGYNVRLELHPSETAWFWRVSIRHLKDGTLPVDLVLIQDVGLGDRGFLMNSEAYA
SQYVDHHIADHETFGSVVMNRQNLKQSGARNPWLVQGCLDGAAAYATDAIQLVQASDR
LGDLLVGPFGTNLPSKRRQQETACPAIQSKSLSVPASGATATFFAVFAADHPEASSDA
DLSRLDELAATEGTAADIAEAAPVRSLLQDAALLKAEALDKKMISQLYPQRSLEERVD
GKLLSFFVSDGVLNRHVVLRDKELLVARRHGAIVRSGENMLLDDRTLAATCWMQGIFA
AQLTIGNTSFHKLFSVSRDPYNLTRASGLRIMADVGAGWQLLAVPSAFEMGLSDCRWI
YRLPERTIIVSAVASGEDAAMQWTVSVEGEPCRFLVFGHVVLGEREYDAGGQIEFDTS
GKRLLFRPDPAWLWGERYPDAGYWLVSSTPDAIEEIGGDELLYSDGVTRNGAFVALRS
LMTQALSFAVVGSMTDAAEAERLAQRYQAGVTDEAMLAPASKFWRNTVRGLTVASTSP
DLAAQTTLLPWLAHDAIVHLSVPHGLEQYTGAAWGTRDACQGPIEFLLAYEHDREAKQ
VLKTVFSEQYLGKGDWPQWFMLEPYANIRAGDSHGDIVVWPLKALCDYIEATGDLAIL
DEKVSWRDEKTMARAELDTIAIHVEKLLDTVREAFIPGTHLIRYGEGDWNDSLQPADP
HLRDWMVSSWTVALLYEQIVRYSAILRRLGHGGKAKGLRKIATAMRRDFNRHLVRDGV
VAGYGIFDPSHDGVELLLHPSDRRTGLHFSLISMTQAMLGGLFTPAQRQGHMKLIEEH
LLFPDGVRLMEKPAAYAGGPETLFRRAESSSFFGREIGLMYVHAHLRYCETLALDAEA
EELWKAIALVNPISVTSALPHASLRQRNTYFSSSDAAFHDRYQAAAEWERVKAGKIAV
DGGWRIYSSGPGLYTRSFVENILGFKRRFGRRKRKPLLPAVHASADLQTDHAVWRRLM
KPKPEV"
misc_feature complement(31763..34771)
/locus_tag="Rleg_6606"
/note="Cellobiose phosphorylase [Carbohydrate transport
and metabolism]; Region: COG3459"
/db_xref="CDD:33262"
gene 35260..35928
/locus_tag="Rleg_6607"
/db_xref="GeneID:8022857"
CDS 35260..35928
/locus_tag="Rleg_6607"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sbn:Sbal195_2140 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984610.1"
/db_xref="GI:241666526"
/db_xref="GeneID:8022857"
/translation="MTQFFETTQGIMAMGALIGAGGLAAGSLLPIVIRLAKSGINRRP
KAEVRNLAMLTVLALDDFVGASYAAVHDMPEFNPMDEGQFAFHVPDPTLALPREANWG
LFNTELSEEILWLSNRVKTLSYALDSLDLSRPGYDGFFERRQEGYAGLAAEAMDIIER
MLEEFDLTLPGKPDYYRQREGLVSAVQKAGENTSQRPKARTVAHPSGSNVLQLFPKAN
DDAE"
sig_peptide 35260..35337
/locus_tag="Rleg_6607"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.893) with cleavage site probability 0.602 at
residue 26;
SNP /replace=C"
gene 36740..37528
/locus_tag="Rleg_6608"
/db_xref="GeneID:8022858"
CDS 36740..37528
/locus_tag="Rleg_6608"
/inference="protein motif:PFAM:PF00929"
/note="PFAM: Exonuclease RNase T and DNA polymerase III;
SMART: Exonuclease;
KEGG: gdi:GDI2107 putative exodeoxyribonuclease;
SNP /replace=A"
/codon_start=1
/transl_table=11
/product="Exonuclease RNase T and DNA polymerase III"
/protein_id="YP_002984611.1"
/db_xref="GI:241666527"
/db_xref="InterPro:IPR006055"
/db_xref="InterPro:IPR013520"
/db_xref="GeneID:8022858"
/translation="MLIESSGILSKPVDHKSRIRVVDLETAGNGLNDVCEVGWQDVVL
GHDGGWQVDEERGSLLINPGRPISPETMAIHHIVDAEVATAPFWKEIASSVLRPEGGV
IALAAHRASFEQRYCTPRFTGGAAWICTWKCALRLWPELPRFSNQMLRYLRMPEGLVH
AIGLPAHRAMPDAYVTAHHLRDMLNESTFEQLVKWSSEPGLLPRVPSGPERGKSWDRL
DIAALQAFARDRDADLRFSAETELRRRGDADMKVADEAEQGTLF"
misc_feature 36800..37282
/locus_tag="Rleg_6608"
/note="DEDDh 3'-5' exonuclease domain family; Region:
DEDDh; cd06127"
/db_xref="CDD:176648"
misc_feature order(36806..36817,36827..36829,37061..37066,37070..37078,
37238..37240,37253..37255)
/locus_tag="Rleg_6608"
/note="active site"
/db_xref="CDD:176648"
misc_feature order(36806..36817,36827..36829,37061..37066,37070..37075,
37238..37240,37253..37255)
/locus_tag="Rleg_6608"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176648"
misc_feature order(36806..36808,36812..36814,37076..37078,37238..37240,
37253..37255)
/locus_tag="Rleg_6608"
/note="catalytic site [active]"
/db_xref="CDD:176648"
gene 37577..37837
/locus_tag="Rleg_6609"
/db_xref="GeneID:8022859"
CDS 37577..37837
/locus_tag="Rleg_6609"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984612.1"
/db_xref="GI:241666528"
/db_xref="GeneID:8022859"
/translation="MAERMSERAKGDIDAILERLYRVSPELDRIAADCERALRLNAEA
RGDYISPRTMQAFAEMRDAVSALYGSAQNAMKEADRFFKPKS"
gene 38060..38356
/locus_tag="Rleg_6610"
/db_xref="GeneID:8022860"
CDS 38060..38356
/locus_tag="Rleg_6610"
/inference="protein motif:PFAM:PF05239"
/note="PFAM: PRC-barrel domain protein;
KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="PRC-barrel domain protein"
/protein_id="YP_002984613.1"
/db_xref="GI:241666529"
/db_xref="InterPro:IPR007903"
/db_xref="GeneID:8022860"
/translation="MDHSKHVRLGTDELTPAVLEGATVYGADDDKVGSVDHMHGSGSS
ANVVIDVGGFLGIGAKPVSVPISDLDFMRDEDGDVHAVTSWTKDQLKDMPEHRD"
gene complement(38462..40003)
/locus_tag="Rleg_6611"
/db_xref="GeneID:8022861"
CDS complement(38462..40003)
/locus_tag="Rleg_6611"
/inference="protein motif:TFAM:TIGR00711"
/note="TIGRFAM: drug resistance transporter, EmrB/QacA
subfamily;
PFAM: major facilitator superfamily MFS_1;
KEGG: rec:RHECIAT_PA0000315 putative multidrug resistance
transporter protein;
SNP /replace=G"
/codon_start=1
/transl_table=11
/product="drug resistance transporter, EmrB/QacA
subfamily"
/protein_id="YP_002984614.1"
/db_xref="GI:241666530"
/db_xref="InterPro:IPR004638"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8022861"
/translation="MSERLESARPDETPAIVWLGFMAMCVGMFMAILDVQVVATSLPT
IQSALGIDPDQMSWIQTAYLIAEVVAIPLTGLLTRLLTMRWLFVTAISLFVAASAGCA
ASGSFGELVAWRVLQGFSGGTLIPSVFSAVFILFPNERQALATTIAGVLAVLAPTVGP
IVGGWLTETYSWHWLFLINVIPGIVSAIVAAWFLPRQALDPSELGHLDTLSLLLMATA
LTTLELSLKEAPTSGWTSAYVLSLLTICLTSGGAFIWRTLRRRRPIVDLGNFGDRNFL
VGSVLSFVLGIGLFGSVYLMPVYLAFIRGHDALEIGMTMLVTGIAQLITAPIAVALEK
RMDARLLSAAGFALFAIGVGMSAFQDPRSDYDAMYWPQVVRGVAIMFCLLPPTRLALG
TLPPERIPDASGLFNLMRNLGGAIGIALIDTIIYTRSEPLGQGLWTRLQAGDVEAASF
VGAPLQTIAGHNGSFDADTTALLDPLVQTAASVQAINEAWMVIAVLTGCALLSVPFAR
RPTPT"
misc_feature complement(38483..39943)
/locus_tag="Rleg_6611"
/note="drug resistance transporter, EmrB/QacA subfamily;
Region: efflux_EmrB; TIGR00711"
/db_xref="CDD:129794"
misc_feature complement(<39416..39943)
/locus_tag="Rleg_6611"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(39536..39538,39554..39559,39566..39571,
39605..39607,39614..39619,39626..39631,39638..39643,
39779..39784,39788..39793,39803..39805,39812..39817,
39824..39826,39875..39880,39884..39892,39899..39901))
/locus_tag="Rleg_6611"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature complement(38741..>39187)
/locus_tag="Rleg_6611"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(40241..41149)
/locus_tag="Rleg_6612"
/db_xref="GeneID:8022862"
CDS complement(40241..41149)
/locus_tag="Rleg_6612"
/inference="protein motif:PFAM:PF00700"
/note="PFAM: flagellin domain protein;
KEGG: ret:RHE_PE00392 flagellin C protein"
/codon_start=1
/transl_table=11
/product="flagellin domain protein"
/protein_id="YP_002984615.1"
/db_xref="GI:241666531"
/db_xref="InterPro:IPR001029"
/db_xref="InterPro:IPR001492"
/db_xref="GeneID:8022862"
/translation="MTSINTNNSAMSALQTLRSINSNLETTQNSVSTGYRVDTASDNA
AYWSIATTMRSDNKALSAVSDALGLGAAKVDTAYTAMENAIDVVDEIKSKLVAATEDG
VDKSKVQEEITQLQEQLLSIAQSASFSGENWVAGESGTKSVVSSFVRDGSGAVSVKVT
DYALDTSSTGNVLFGMSSGTIDTASGILGTVDANGDSVYSLDITDFTTGQIQSALSTI
ESALSAMTSAGAQLGSISTRIELQEDFVGALSDSIESGVGRLVDADMEEESSRLSALQ
TQQQLAIQSLSIANSSSQNILSLFRS"
misc_feature complement(40247..41149)
/locus_tag="Rleg_6612"
/note="flagellin; Reviewed; Region: PRK12687"
/db_xref="CDD:105853"
misc_feature complement(40742..41140)
/locus_tag="Rleg_6612"
/note="Bacterial flagellin N-terminal helical region;
Region: Flagellin_N; pfam00669"
/db_xref="CDD:144315"
misc_feature complement(40271..40507)
/locus_tag="Rleg_6612"
/note="Bacterial flagellin C-terminal helical region;
Region: Flagellin_C; pfam00700"
/db_xref="CDD:144340"
gene 41729..43750
/locus_tag="Rleg_6613"
/db_xref="GeneID:8022863"
CDS 41729..43750
/locus_tag="Rleg_6613"
/EC_number="3.2.1.52"
/inference="protein motif:PRIAM:3.2.1.52"
/note="PFAM: Glycoside hydrolase, family 20, catalytic
core;
KEGG: rec:RHECIAT_PA0000313 probable
beta-N-acetylhexosaminidase protein"
/codon_start=1
/transl_table=11
/product="beta-N-acetylhexosaminidase"
/protein_id="YP_002984616.1"
/db_xref="GI:241666532"
/db_xref="InterPro:IPR001540"
/db_xref="InterPro:IPR002173"
/db_xref="InterPro:IPR015883"
/db_xref="GeneID:8022863"
/translation="MSTSRPKALRLETLWNPPADGKEFSYVLRLKNLGTEPLSNFSLC
VSGPGRVDPAGRVEGATVSQRLSNFTEFQPPANFVLGAGETWTISVHALSWQFRHWTD
GATSGYLALSDGSTIVLSIEPTRSSVSNAPLKRGAEIYPVPINAPVQVSIIPWPNHVA
VTSRRPLPAGFAPQSQSAAGEAASRSFAALVEHLFAVEGIMRSEAEGAVPVALKDAAG
LGPEAYRLSFEGEAITIEASSQTGFLYGLVTLGQIWRGARLHPEVFQFPASGEIVDEP
SMGWRGLHLDVARQFYGAAEVKKLLAVLAWNKLNRFHWHLSDDEAWRVEIDAYPDLTA
VGAWRGHGLAVPPLLGSSPARTGGYYTKASIREIVAHAKSFGVEIVPEIDVPGHCYAM
LQAIPELRDPAEAGSYYSVQGFPDNCINPAREKTYEIIETILLELIELFPFKVIHLGA
DEVPLGAWSGSPEALERLRTVAGDEVADAHAKRLNVVTNTHGADDIHGSGAAILQAEF
LNRVQRFLASKGCITGGWEEAAHGDVIDKSKSYLCSWRNVEVSAELAERGYEMVVCPG
QVYYLDMALRPDWDEPGASWAGTSDAEKLYNFDPIGGWTASQKQKLLGIQACIWSEPM
TDRAVFDRLVFPRLSALAETGWTKPSSKSWERFRALAGLMPLLYGLQQS"
misc_feature 42563..43711
/locus_tag="Rleg_6613"
/note="The chitobiase of Serratia marcescens is a
beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase
family 20 (GH20) domain that hydrolyzes the
beta-1,4-glycosidic linkages in oligomers derived from
chitin. Chitin is degraded by a two step process: i)...;
Region: GH20_chitobiase-like; cd06563"
/db_xref="CDD:119333"
misc_feature 42566..43675
/locus_tag="Rleg_6613"
/note="Glycosyl hydrolase family 20, catalytic domain;
Region: Glyco_hydro_20; pfam00728"
/db_xref="CDD:144359"
misc_feature order(42593..42595,42890..42892,43079..43084,43304..43306,
43361..43363,43436..43438,43442..43444,43586..43588,
43592..43594)
/locus_tag="Rleg_6613"
/note="active site"
/db_xref="CDD:119333"
gene complement(43836..44312)
/locus_tag="Rleg_6614"
/db_xref="GeneID:8022864"
CDS complement(43836..44312)
/locus_tag="Rleg_6614"
/inference="protein motif:PFAM:PF01638"
/note="PFAM: helix-turn-helix HxlR type;
KEGG: transcriptional regulator"
/codon_start=1
/transl_table=11
/product="HxlR family transcriptional regulator"
/protein_id="YP_002984617.1"
/db_xref="GI:241666533"
/db_xref="InterPro:IPR002577"
/db_xref="GeneID:8022864"
/translation="MKNLSNQPCLIARSLALVGDAWSMLIMRDAHAGLTRFDEFRKSL
GIVPTMLTGRLSSLTEEGLLEKRRYSERPPRDEYVLTEAGRDFLPVLFAIGAWGRKHR
SGGAVTRFFDAATGTEIDPLTIDRATGAEIGTRPIRIAAPECELPAADGAAPDNAL"
misc_feature complement(44010..44306)
/locus_tag="Rleg_6614"
/note="Predicted transcriptional regulators
[Transcription]; Region: COG1733"
/db_xref="CDD:31919"
gene 44403..45218
/locus_tag="Rleg_6615"
/db_xref="GeneID:8022865"
CDS 44403..45218
/locus_tag="Rleg_6615"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR
domain protein; NAD-dependent epimerase/dehydratase;
KEGG: oxidoreductase protein"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase"
/protein_id="YP_002984618.1"
/db_xref="GI:241666534"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR002424"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8022865"
/translation="MSKRERGIALVTGASSGIGLVTAKALLRDGYKVFGTSRKPMADT
ADGITMLVCDVIDDQSVQSVVDEVLKRTGRIDLLVNNAGIGLLGGAEESTTEQAKAVF
DVNVFGTMRMTNAVLPVMRRQRSGRIINLSSILGLIPAPFNALYAATKHAIEGYSESL
DHEVRTQGIRVVLVEPGVTRTSFEENITRPDRPLAVYDAVRADAERLMREIVSKGDAP
EVVAATVIRAANAASPRRRYTAGKAAGQIRFIRRFLPESFVDKNLRKFNKLPD"
sig_peptide 44403..44474
/locus_tag="Rleg_6615"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.969) with cleavage site probability 0.923 at
residue 24"
misc_feature 44409..45212
/locus_tag="Rleg_6615"
/note="short chain dehydrogenase; Provisional; Region:
PRK06179"
/db_xref="CDD:180445"
misc_feature 44424..45134
/locus_tag="Rleg_6615"
/note="17beta hydroxysteroid dehydrogenase-like, classical
(c) SDRs; Region: 17beta-HSD-like_SDR_c; cd05374"
/db_xref="CDD:187632"
misc_feature order(44439..44441,44445..44456,44514..44516,44559..44567,
44643..44654,44712..44714,44793..44801,44838..44840,
44850..44852,44937..44939,44943..44951)
/locus_tag="Rleg_6615"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187632"
misc_feature order(44715..44717,44799..44801,44838..44840,44850..44852)
/locus_tag="Rleg_6615"
/note="active site"
/db_xref="CDD:187632"
misc_feature order(44799..44807,44820..44822,44838..44840,44931..44936,
44952..44954,44991..44993,45000..45002,45132..45134)
/locus_tag="Rleg_6615"
/note="steroid binding site; other site"
/db_xref="CDD:187632"
gene 45269..46270
/locus_tag="Rleg_6616"
/db_xref="GeneID:8022866"
CDS 45269..46270
/locus_tag="Rleg_6616"
/inference="protein motif:PFAM:PF00107"
/note="PFAM: alcohol dehydrogenase zinc-binding domain
protein; alcohol dehydrogenase GroES domain protein;
KEGG: zinc-binding oxidoreductase protein"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase zinc-binding domain
protein"
/protein_id="YP_002984619.1"
/db_xref="GI:241666535"
/db_xref="InterPro:IPR002364"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:8022866"
/translation="MKAFLIDHYKKGGALRLGQSPEPLLRENDVMVEIHAASVNPLDA
KIRDGEFKLILPYRLPLVLGNDVAGVVVRVGANVRQFKPGDAVYARPGKDRIGTFAEY
IAIDAADVALKPANLSMEEAASIPLVALTAWQALVERAKLQKGQRVLIHAGSGGVGTI
AIQLAKHLGAHVATTVSTANIDLVKSLGADVVVDYRKDDFEKVLKGYDVVLNSLGKET
LEKSLAVLKPGGKLISISGPPDPDFARQNGFGFLLQQVMRFLSFGIRRKSKSRGIGYS
FLFMTANGAQLGKITALIEAGAIRPVIDRAFPFEKTNEALDYVETGRVKGKVVIAVK"
misc_feature 45269..46264
/locus_tag="Rleg_6616"
/note="NADPH:quinone reductase and related Zn-dependent
oxidoreductases [Energy production and conversion /
General function prediction only]; Region: Qor; COG0604"
/db_xref="CDD:30949"
misc_feature 45269..46258
/locus_tag="Rleg_6616"
/note="alcohol dehydrogenase and quinone reductase-like
medium chain degydrogenases/reductases; Region:
MDR_like_2; cd05289"
/db_xref="CDD:176191"
misc_feature order(45386..45394,45401..45403,45647..45649,45659..45661,
45725..45742,45797..45802,45806..45808,45848..45850,
45905..45910,45971..45976,46100..46108)
/locus_tag="Rleg_6616"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176191"
gene complement(46376..47239)
/locus_tag="Rleg_6617"
/db_xref="GeneID:8022867"
CDS complement(46376..47239)
/locus_tag="Rleg_6617"
/inference="protein motif:PFAM:PF00165"
/note="PFAM: helix-turn-helix- domain containing protein
AraC type;
SMART: helix-turn-helix- domain containing protein AraC
type;
KEGG: rec:RHECIAT_PA0000312 putative transcriptional
regulator protein, AraC family;
SNP /replace=A"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_002984620.1"
/db_xref="GI:241666536"
/db_xref="InterPro:IPR000005"
/db_xref="GeneID:8022867"
/translation="MKYSHPSVFRFLSASPTAQMSQSIDLGFGRSAAIWSNAHDRMSY
QRPNDHTFSLYLRGGAGTRRLDGSPAARGRPGVLCIMPQEHSSEWEITDFSQFVHLYV
PDDQMRRMFAETFDRDARLMALPELTFADAPVLAHTLRQMTKAMVTGGHLLAEEAMTQ
AINDFFVDPRYGGMRPCAISGGLAPHVRRRSLEYIEAHLGETIRLQDLATIGQLSAFH
FQRMFRASYGVSPHGWVAHRRIERAKSMLSGMDPIAQIASACGFSSQSHMTRAFKSGT
GVTPSAYRQRP"
misc_feature complement(46388..46633)
/locus_tag="Rleg_6617"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature complement(46385..>46486)
/locus_tag="Rleg_6617"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 47394..48305
/locus_tag="Rleg_6618"
/db_xref="GeneID:8022868"
CDS 47394..48305
/locus_tag="Rleg_6618"
/inference="protein motif:PFAM:PF00892"
/note="PFAM: protein of unknown function DUF6
transmembrane;
KEGG: rec:RHECIAT_PA0000311 hypothetical conserved
membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984621.1"
/db_xref="GI:241666537"
/db_xref="InterPro:IPR000620"
/db_xref="GeneID:8022868"
/translation="MANAALFIATVLIWGTTWIAIAMQVGPVPVLVSVFYRFAVAAAI
LVAILVVMRRLKLPALRDQPFILAQALCLFSLNFICFYNAAASIPSGLISVIFSLATI
YNAVNARLFFGDRITGRTLLAAALGATGLLLLFGHDVVVDFDMATLKGIGLAALGTLF
FSLGNMASRRNSAVGISPLTANAWGMTYGAIILLFLIAVTRTPIVAPPNITYLAAMLY
LAAIGSVIGFTTYLMLVSRIGSSRAAYATVLFPIVALSLSTVFEGYHWSGLGLFGLAL
TLLGNVVIFAPPLARRPQSDARLPAGG"
sig_peptide 47394..47462
/locus_tag="Rleg_6618"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.647) with cleavage site probability 0.519 at
residue 23"
misc_feature 47919..>48176
/locus_tag="Rleg_6618"
/note="EamA-like transporter family; Region: EamA;
pfam00892"
/db_xref="CDD:144477"
gene complement(48341..49543)
/locus_tag="Rleg_6619"
/db_xref="GeneID:8022869"
CDS complement(48341..49543)
/locus_tag="Rleg_6619"
/inference="protein motif:PFAM:PF00480"
/note="PFAM: ROK family protein;
KEGG: rec:RHECIAT_PA0000310 probable transcriptional
regulator protein, ROK/CRP family"
/codon_start=1
/transl_table=11
/product="ROK family protein"
/protein_id="YP_002984622.1"
/db_xref="GI:241666538"
/db_xref="InterPro:IPR000600"
/db_xref="GeneID:8022869"
/translation="MKAISGTNLEQAKSHNRRVVIEAVRTNGPLSRAAIARMTALTAQ
TVSNIVEELERSHLLVPSQAQKLARGQPIIPYSINPRGAYSIGLELGRQRASGVLTDL
SGAVCARIERHVEHPDPQRAMPALQAIVEDLQEAFAFDRNRLLGVGMALPGRYADGGT
TSLSPLNLPGWQDFPVRHELEQRIKVPVLVENDATAAAIGERLHGVARGLGSFVYLFL
AGGGGIGAGMFLDGHLYKGSRNNAGEIGHIIVEPHGKLCSCGKRGCLDRYVSPAVAYE
FMGIANAEELSSDDLDALIAKGGEGLDVWLDQAVQPLRQTVDFLELAFDPQTIVLGGS
ISTSLMLRLAERLEPLHTPIDPNQKRAVPRVMIGMTGKDTAILGAAALPIFSETNPRF
DVLQKPLG"
misc_feature complement(<49379..49486)
/locus_tag="Rleg_6619"
/note="MarR family; Region: MarR_2; pfam12802"
/db_xref="CDD:205082"
misc_feature complement(order(49418..49420,49445..49453,49457..49459))
/locus_tag="Rleg_6619"
/note="non-specific DNA interactions [nucleotide binding];
other site"
/db_xref="CDD:28976"
misc_feature complement(49400..49420)
/locus_tag="Rleg_6619"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:28976"
misc_feature complement(order(49400..49402,49412..49417))
/locus_tag="Rleg_6619"
/note="sequence specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28976"
misc_feature complement(49412..49417)
/locus_tag="Rleg_6619"
/note="putative cAMP binding site [chemical binding];
other site"
/db_xref="CDD:28976"
misc_feature complement(48395..49312)
/locus_tag="Rleg_6619"
/note="Transcriptional regulator/sugar kinase
[Transcription / Carbohydrate transport and metabolism];
Region: NagC; COG1940"
/db_xref="CDD:32123"
misc_feature complement(<48929..49288)
/locus_tag="Rleg_6619"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cd00012"
/db_xref="CDD:212657"
misc_feature complement(order(48965..48967,49256..49258,49262..49264,
49268..49279))
/locus_tag="Rleg_6619"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
misc_feature complement(48398..49105)
/locus_tag="Rleg_6619"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:213144"
gene complement(49640..50839)
/locus_tag="Rleg_6620"
/db_xref="GeneID:8022870"
CDS complement(49640..50839)
/locus_tag="Rleg_6620"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: rec:RHECIAT_PA0000309 probable transporter, permease
protein"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily MFS_1"
/protein_id="YP_002984623.1"
/db_xref="GI:241666539"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8022870"
/translation="MSRLFPDVFRNPAIRASMIAIFIFGMAGAMTAPYRSIIGIRELG
LSDGLYSFLSFVSAAVNVVISILLGNLADRLGEYRSTMIGACLFGIVGYGVVYAFPSA
AVFVISGLLPLPIYGALNSLLFANARAAMHGMNRSDMVTANSGVRAMISLSWVLIPGI
TGLLLSGASSMLPAYLFASISCLLCQGIILFALPKRAATEMAAVHHLTYLGALGQVVS
PRISAHICGVALITSTLHLNDALLPLIATGAAHGKLSDVGILVGIVALLEVVFIIVWS
RIARKTGQMTALGAGTIIYAVFLSLLGFASEPWHLYALTLLAGIGASAIITIPITYLQ
DLIADRPGLGSALISVNIFASAGIGALVFAAGTYVTGYSGTAILSAVTGLAGIAIIGL
LRRGKAR"
sig_peptide complement(50744..50839)
/locus_tag="Rleg_6620"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.946) with cleavage site probability 0.749 at
residue 32"
misc_feature complement(49658..50800)
/locus_tag="Rleg_6620"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(49658..50794)
/locus_tag="Rleg_6620"
/note="sugar efflux transporter; Region: 2A0120;
TIGR00899"
/db_xref="CDD:129977"
misc_feature complement(order(49772..49774,49781..49786,49793..49798,
49805..49810,49838..49840,49847..49852,49862..49864,
49871..49876,49883..49885,50024..50026,50036..50038,
50045..50047,50057..50059,50069..50071,50111..50113,
50120..50125,50132..50137,50144..50146,50378..50380,
50396..50401,50408..50413,50444..50446,50453..50458,
50465..50470,50477..50482,50633..50638,50642..50647,
50657..50659,50666..50671,50678..50680,50732..50737,
50741..50749,50756..50758))
/locus_tag="Rleg_6620"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(50901..51677)
/locus_tag="Rleg_6621"
/db_xref="GeneID:8022871"
CDS complement(50901..51677)
/locus_tag="Rleg_6621"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR;
KEGG: ret:RHE_PE00386 short chain dehydrogenase"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase"
/protein_id="YP_002984624.1"
/db_xref="GI:241666540"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR002424"
/db_xref="GeneID:8022871"
/translation="MTQSIAIVTGAAGDIGAAIAARLADDHDVVLLADIDAEAAAAVA
LKLGPDNRFVAVQCDVTSETSIAELARRAADVGVCRTLVNNAGAARATSLHDTTPEIW
RADNALNLEAAFLCFRAFEPMLTISKGSVVNIASVNGLHVFGHPAYSVAKAGLLHFTR
LVAVEYGKFGIRSNAVAPGTVKTQAWEARAAANPNVFEEARRWYPLQRVVDPKDVANA
VAFLAGPLAAAITGVCLPVDCGLTAGQAELARTFSQSEHY"
misc_feature complement(50964..51527)
/locus_tag="Rleg_6621"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(51126..51131,51135..51146,51222..51224,
51234..51236,51270..51278,51354..51356,51417..51425,
51498..51506))
/locus_tag="Rleg_6621"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(51222..51224,51234..51236,51270..51272,
51351..51353))
/locus_tag="Rleg_6621"
/note="active site"
/db_xref="CDD:212491"
gene complement(51703..52566)
/locus_tag="Rleg_6622"
/db_xref="GeneID:8022872"
CDS complement(51703..52566)
/locus_tag="Rleg_6622"
/inference="protein motif:PFAM:PF01380"
/note="PFAM: sugar isomerase (SIS); helix-turn-helix
protein RpiR;
KEGG: rec:RHECIAT_PA0000307 putative transcriptional
regulator protein"
/codon_start=1
/transl_table=11
/product="RpiR family transcriptional regulator"
/protein_id="YP_002984625.1"
/db_xref="GI:241666541"
/db_xref="InterPro:IPR000281"
/db_xref="InterPro:IPR000843"
/db_xref="InterPro:IPR001347"
/db_xref="GeneID:8022872"
/translation="MDIFSTLQEDKGRLSPSESRIAEIIVNDFEFAVNASIIELAERA
KVSPPTVTRFCRRLGCESFSDFKVQLARTAHIGVRYLKPESKSTDPADVAQDIITKAQ
NALFLLHRSLDLAAIEAAVSHIAKADMIYAFGSGGNSSMIADELQNRLFRLGLRITAS
SDHSMQLMMAAAARPGDVLIGSSFSGRNMELVRAFELARQTKVKTIALTQTDSPVAKA
AEIVVPIDLPEGHNIYRPTSTRIAYIATIDILSSLVAYAVQPKATTTLRRIKQQLVIH
RDGDDRQLLGD"
misc_feature complement(51736..52566)
/locus_tag="Rleg_6622"
/note="Transcriptional regulators [Transcription]; Region:
RpiR; COG1737"
/db_xref="CDD:31923"
misc_feature complement(52354..52566)
/locus_tag="Rleg_6622"
/note="Helix-turn-helix domain, rpiR family; Region:
HTH_6; pfam01418"
/db_xref="CDD:201784"
misc_feature complement(51808..52224)
/locus_tag="Rleg_6622"
/note="RpiR-like protein. RpiR contains a SIS (Sugar
ISomerase) domain, which is found in many phosphosugar
isomerases and phosphosugar binding proteins. In E. coli,
rpiR negatively regulates the expression of rpiB gene.
Both rpiB and rpiA are ribose phosphate...; Region:
SIS_RpiR; cd05013"
/db_xref="CDD:88408"
misc_feature complement(order(52018..52020,52150..52152))
/locus_tag="Rleg_6622"
/note="putative active site [active]"
/db_xref="CDD:88408"
gene complement(52588..52977)
/locus_tag="Rleg_6623"
/db_xref="GeneID:8022873"
CDS complement(52588..52977)
/locus_tag="Rleg_6623"
/inference="protein motif:PFAM:PF01042"
/note="PFAM: Endoribonuclease L-PSP;
KEGG: ret:RHE_PE00384 YigF family translation initiation
factor"
/codon_start=1
/transl_table=11
/product="Endoribonuclease L-PSP"
/protein_id="YP_002984626.1"
/db_xref="GI:241666542"
/db_xref="InterPro:IPR006175"
/db_xref="GeneID:8022873"
/translation="MPIKRYGTVQTGAGGKALPFARAVEADGWLYVSGQVAMEDGEII
DGNIIAQTHKTIANVLSILDEAGYGVEDVVRVGVWLDDPRDFWTFNKIYQEYFGEHPP
ARACVQSSMMVDCKVEIDCVAYKKRDG"
misc_feature complement(52609..52920)
/locus_tag="Rleg_6623"
/note="YjgF, YER057c, and UK114 belong to a large family
of proteins present in bacteria, archaea, and eukaryotes
with no definitive function. The conserved domain is
similar in structure to chorismate mutase but there is no
sequence similarity and no...; Region:
YjgF_YER057c_UK114_family; cd00448"
/db_xref="CDD:100004"
misc_feature complement(order(52612..52614,52618..52620,52624..52626,
52651..52674,52699..52701,52708..52710,52741..52743,
52747..52749,52753..52758,52762..52764,52876..52881,
52885..52887,52891..52893,52900..52902,52906..52908,
52915..52920))
/locus_tag="Rleg_6623"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100004"
misc_feature complement(order(52624..52626,52666..52668,52708..52710,
52720..52722,52918..52920))
/locus_tag="Rleg_6623"
/note="putative active site [active]"
/db_xref="CDD:100004"
gene 53089..53571
/locus_tag="Rleg_6624"
/db_xref="GeneID:8022874"
CDS 53089..53571
/locus_tag="Rleg_6624"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000305"
/note="KEGG: rec:RHECIAT_PA0000305 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984627.1"
/db_xref="GI:241666543"
/db_xref="GeneID:8022874"
/translation="MRDPFQNPFPSDSARHAIWEMLVPRDIDAFLAADWSMVEHDFVE
EGFIGIDAQKQVNPDRWRLAFPTLSAYRQEWLRQAKDFAEQSFAEDARTAIFATTTLE
DIEIEGDMALVRKKFDGGITKSDDSRDVLQWQTLYYCRLHQGRWKISGFTGYLPNPMG
"
gene 53602..55077
/locus_tag="Rleg_6625"
/db_xref="GeneID:8022875"
CDS 53602..55077
/locus_tag="Rleg_6625"
/inference="protein motif:PFAM:PF07364"
/note="PFAM: Microcystin LR degradation protein MlrC-like;
MlrC domain protein;
KEGG: ret:RHE_PE00382 hypothetical protein"
/codon_start=1
/transl_table=11
/product="Microcystin LR degradation protein MlrC-like
protein"
/protein_id="YP_002984628.1"
/db_xref="GI:241666544"
/db_xref="InterPro:IPR010799"
/db_xref="InterPro:IPR015995"
/db_xref="GeneID:8022875"
/translation="MRIFTAALATETNTFSPICVDRRAFEASLYAPPGQHPETPTLCT
APITVGRRVTREKGWELIEGTATWADPAGLVNRTTYEELRDEIIDQLSAAMPVDAVVM
GLHGAMVAAGYEDTEGDLLSRIREIVGPDVLICAELDPHSHLTAKRVAALDFAVYFKE
FPHTDFVDRAEDLWRIAVATLEGRIKPDMSVFDCKMIDVFPTSREPMRSFVDKIMQIE
KDDPDVLSISVIHGFMVGDVPEMGTKLLVVTDNKPEKGAALARELGLEIFSKRGTFMV
PQIDEKEAVSRAMTATAWPVVIADVWDNPGGGTAGDATVILGELIARGVTSAAIGTIW
DPVAVQICFAAGEGAEIPLRFGAKSAPGTGNPVDGTVKVVKLVKNAEMQFGESLAPFG
DAAHIVLGGIDIILNSTRAQSFDPSLFSAMGIDPARQKILVIKSTNHFFASFSKIAAE
ILYCSAGTPYPNNPATTPYKRAPKTIWPIVADPHGPERGAA"
misc_feature 53602..55062
/locus_tag="Rleg_6625"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG5476"
/db_xref="CDD:35035"
misc_feature 53602..54471
/locus_tag="Rleg_6625"
/note="Protein of unknown function (DUF1485); Region:
DUF1485; pfam07364"
/db_xref="CDD:148781"
misc_feature 54490..54969
/locus_tag="Rleg_6625"
/note="MlrC C-terminus; Region: MlrC_C; pfam07171"
/db_xref="CDD:115801"
gene 55078..56178
/locus_tag="Rleg_6626"
/db_xref="GeneID:8022876"
CDS 55078..56178
/locus_tag="Rleg_6626"
/inference="protein motif:PFAM:PF01168"
/note="PFAM: alanine racemase;
KEGG: rec:RHECIAT_PA0000303 putative amino acid processing
protein"
/codon_start=1
/transl_table=11
/product="alanine racemase"
/protein_id="YP_002984629.1"
/db_xref="GI:241666545"
/db_xref="InterPro:IPR001608"
/db_xref="GeneID:8022876"
/translation="MHDNRFAVVAKAGDRIADLSTPRPVIDEDRLAANIGRVQSYMDQ
HGLNFRPHIKTHKIPALAVAQVAAGAKGINCQKVTEAEVFAEAGFEDILITFNILGPQ
KLERLAKLNEKISALKVVADSEVTVDGLAAHFSGHKPLNVLVECDTGGGRCGVQTPDE
AASLAKRIGASDGLTFGGIVTYPKPQSAAAVEAFIAETLAQLKAEGITCPIVSNGGTP
SLFEAHLVTSATEHRAGTYIYNDRQMVRMGHCTEDNCAMHVLATVVSRPNADRAVIDA
GSKALTSDLQGFSDYGLVVGYPEARISSLSEEHGVIDLSNCTGPRPQIGQKLFIIPNH
TCVVSNLFDTMVFHRGGVVTRVEQVAARGLVW"
misc_feature 55114..56160
/locus_tag="Rleg_6626"
/note="Predicted amino acid aldolase or racemase [Amino
acid transport and metabolism]; Region: COG3616"
/db_xref="CDD:33415"
misc_feature 55132..56166
/locus_tag="Rleg_6626"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzymes, Low Specificity D-Threonine Aldolase-like;
Region: PLPDE_III_LS_D-TA_like; cd06820"
/db_xref="CDD:143494"
misc_feature order(55138..55140,55237..55239,55243..55245,55303..55308,
55312..55317,55333..55335,55384..55386,55441..55443,
55450..55452,55462..55464,55528..55539,55867..55878,
55888..55890,55894..55896,55900..55902,55909..55914,
56113..56115)
/locus_tag="Rleg_6626"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143494"
misc_feature order(55231..55233,55237..55239,55297..55299,55360..55362,
55510..55512,55531..55533,55621..55623,55723..55728,
55774..55785,55909..55911)
/locus_tag="Rleg_6626"
/note="active site"
/db_xref="CDD:143494"
misc_feature order(55231..55233,55237..55239,55297..55299,55360..55362,
55510..55512,55621..55623,55723..55728,55774..55785)
/locus_tag="Rleg_6626"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143494"
misc_feature order(55237..55239,55531..55533,55621..55623,55783..55785)
/locus_tag="Rleg_6626"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143494"
misc_feature 55237..55239
/locus_tag="Rleg_6626"
/note="catalytic residue [active]"
/db_xref="CDD:143494"
gene 56210..56304
/locus_tag="Rleg_6627"
/pseudo
/db_xref="GeneID:8022877"
gene complement(56478..56555)
/locus_tag="Rleg_6628"
/pseudo
/db_xref="GeneID:8022878"
gene 56675..58381
/locus_tag="Rleg_6629"
/db_xref="GeneID:8022879"
CDS 56675..58381
/locus_tag="Rleg_6629"
/inference="protein motif:PFAM:PF00211"
/note="PFAM: adenylyl cyclase class-3/4/guanylyl cyclase;
Tetratricopeptide TPR_2 repeat protein;
SMART: Tetratricopeptide domain protein;
KEGG: rec:RHECIAT_CH0002791 adenylate cyclase protein"
/codon_start=1
/transl_table=11
/product="adenylate/guanylate cyclase with TPR repeats"
/protein_id="YP_002984630.1"
/db_xref="GI:241666546"
/db_xref="InterPro:IPR001054"
/db_xref="InterPro:IPR001464"
/db_xref="InterPro:IPR013026"
/db_xref="InterPro:IPR013105"
/db_xref="GeneID:8022879"
/translation="MTDQSIQRRLAAIVVADVVGYSRLMEADEVATLATLRELRSGVI
EPAVMRNHGRIFKVMGDGFLIEFGSAVDAVAAALEMQRATTAVEASGDRRLLLRVGVN
LGDVIDDGSDVLGDDVNVAARLQTQAAPGGICISANVHGEIVGKISDRFFDAGERYLK
NLTRPVHVWHWPDALQSILPLPECPSIAVLPFTNMSGDDADAPFVDGLTEDLITDLSR
TVGLFVIARNSVYVYKGKPVDVRLVAQELGVRYVLEGSARRAMGRVRINAQLVDTLAG
QHLWADRFDRTVEDVFELQDEVNAKIVEALVGRLTIPTPRNRPKNFEAYDLCVRARLL
TEESPQTEREAYMLLQRAVELEPSYAEALGLLAYNRWLAWTHFGEPEDPNRRMAATFA
QKAVDLDPNDAGCRYVLGTILAYERRWEESEAAFAKALELDPNHADTWAAMSDMSVLD
GRVADGLAQIEKALRLNPYPACWYLCHLGQAQYAAHDYEAAAATLRRKDTYRTNSRKF
LAATLVQLGHREEARREAELFLIAHPHFTIGHWLSSQPLRDASVRDHFVDGFRKAGLP
EM"
misc_feature 56699..57193
/locus_tag="Rleg_6629"
/note="Adenylate cyclase, family 3 (some proteins contain
HAMP domain) [Signal transduction mechanisms]; Region:
CyaA; COG2114"
/db_xref="CDD:32297"
misc_feature 56705..57187
/locus_tag="Rleg_6629"
/note="cyclase homology domain; Region: CHD; cd07302"
/db_xref="CDD:143636"
misc_feature order(56717..56719,56723..56740,56843..56845,56849..56857,
56864..56866,57008..57016,57026..57031,57038..57043,
57152..57154)
/locus_tag="Rleg_6629"
/note="nucleotidyl binding site; other site"
/db_xref="CDD:143636"
misc_feature order(56723..56725,56855..56857)
/locus_tag="Rleg_6629"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143636"
misc_feature order(56738..56740,56771..56773,56780..56785,56792..56794,
56807..56809,56843..56848,56996..56998,57011..57022,
57029..57031,57152..57154)
/locus_tag="Rleg_6629"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143636"
misc_feature 57191..57610
/locus_tag="Rleg_6629"
/note="Predicted integral membrane protein [Function
unknown]; Region: COG5616"
/db_xref="CDD:35175"
misc_feature 57704..57979
/locus_tag="Rleg_6629"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(57707..57709,57719..57721,57728..57730,57773..57775,
57836..57838,57848..57850,57857..57859,57902..57904,
57938..57940,57950..57952,57959..57961)
/locus_tag="Rleg_6629"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature order(57764..57769,57773..57778,57797..57802,57893..57898,
57905..57910,57917..57922)
/locus_tag="Rleg_6629"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 57875..58078
/locus_tag="Rleg_6629"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature 57899..>58099
/locus_tag="Rleg_6629"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(57902..57904,57938..57940,57950..57952,57959..57961,
58004..58006,58040..58042,58052..58054,58061..58063)
/locus_tag="Rleg_6629"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature order(57905..57910,57995..58000,58004..58009,58016..58021,
58097..58099)
/locus_tag="Rleg_6629"
/note="binding surface"
/db_xref="CDD:29151"
gene complement(58688..59821)
/locus_tag="Rleg_6630"
/db_xref="GeneID:8022880"
CDS complement(58688..59821)
/locus_tag="Rleg_6630"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter; Transport-associated OB
domain protein;
SMART: AAA ATPase;
KEGG: rec:RHECIAT_PA0000297 probable sugar uptake ABC
transporter, ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984631.1"
/db_xref="GI:241666547"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013611"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022880"
/translation="MGQLLLNKVQKFYGDYEVLKGVQLDVKNGEFVVFVGPSGCGKST
LLRMIAGLDATSAGDIVIDGIRVNDLPPVKRGIAMVFQSYALYPHMTVFENIAFPLRV
ERMEEEKLKAKVENAARILHLEQRLQQKPGMLSGGQRQRVAIGRAIVREPKIFLFDEP
LSNLDAALRADMRIELAKLHRQLKATMIYVTHDQVEAMTMADRIVVLDSGDISQTGAP
LELYHKPANQFVAGFIGNPKMNFLPVICKGVSANGVEVDYQGQTAVLPVTPRDGMVGK
ALTLGIRPEHIQLGGGDIVFTVTPTVIERLGANTVAYASLNGESENFCAMLPGSVGIR
ADAPVATGINAADCHLFDEAGIAFERRVELTEIDMNVINPTAA"
misc_feature complement(58733..59821)
/locus_tag="Rleg_6630"
/note="glycerol-3-phosphate transporter ATP-binding
subunit; Provisional; Region: ugpC; PRK11650"
/db_xref="CDD:183258"
misc_feature complement(59174..59812)
/locus_tag="Rleg_6630"
/note="The N-terminal ATPase domain of the maltose
transporter, MalK. ATP binding cassette (ABC) proteins
function from bacteria to human, mediating the
translocation of substances into and out of cells or
organelles. ABC transporters contain two...; Region:
ABC_MalK_N; cd03301"
/db_xref="CDD:73060"
misc_feature complement(59693..59716)
/locus_tag="Rleg_6630"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(order(59246..59248,59345..59350,59576..59578,
59690..59698,59702..59707))
/locus_tag="Rleg_6630"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73060"
misc_feature complement(59576..59587)
/locus_tag="Rleg_6630"
/note="Q-loop/lid; other site"
/db_xref="CDD:73060"
misc_feature complement(59393..59422)
/locus_tag="Rleg_6630"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73060"
misc_feature complement(59345..59362)
/locus_tag="Rleg_6630"
/note="Walker B; other site"
/db_xref="CDD:73060"
misc_feature complement(59327..59338)
/locus_tag="Rleg_6630"
/note="D-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(59240..59260)
/locus_tag="Rleg_6630"
/note="H-loop/switch region; other site"
/db_xref="CDD:73060"
misc_feature complement(58769..58984)
/locus_tag="Rleg_6630"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:203932"
gene complement(59912..61144)
/locus_tag="Rleg_6631"
/db_xref="GeneID:8022881"
CDS complement(59912..61144)
/locus_tag="Rleg_6631"
/inference="protein motif:PFAM:PF01547"
/note="PFAM: extracellular solute-binding protein family
1;
KEGG: ret:RHE_PE00370 sugar uptake ABC transporter,
substrate-binding protein"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 1"
/protein_id="YP_002984632.1"
/db_xref="GI:241666548"
/db_xref="InterPro:IPR006059"
/db_xref="GeneID:8022881"
/translation="MSISIKTGLMALALLGSTALTAVTAQAADKEISWIYCGDTIDPV
HTKYIKQWEEKNTGWKIAPEVVGWAQCQDKATTLAAAGTPVAMAYVGSRTLKEFAQND
LIVPVPMTDDEKKTYYPNIVNTVTFEGSQWGVPIAFSTKALYWNKDLFKQAGLDPETP
PKTWAEEIEMAKTIKEKTGIPGFGLSAKTFDNTMHQFMHWVYTNNGTVIDADGKVTLD
SPQILAALKAYKDIVPYSEEGPTAYEQNEVRAIFLDGKVAMIQAGSGAADRLKATKIS
WGITTLPLGPDAKGPGTLLITDSLAIFKGSGVEDKATEFAKFITSPDVQSEYELQGGA
GLTPLRPSAKVDEFVAKDPHWKPLIDGISYGGPEPLFTDYKGFQNSMIEMVQSVVTGK
AEPEAALKKAAGEVEAFK"
sig_peptide complement(61061..61144)
/locus_tag="Rleg_6631"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.983 at
residue 28"
misc_feature complement(60083..61006)
/locus_tag="Rleg_6631"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_8; pfam13416"
/db_xref="CDD:205594"
misc_feature complement(<60146..>60742)
/locus_tag="Rleg_6631"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
gene complement(61191..62048)
/locus_tag="Rleg_6632"
/db_xref="GeneID:8022882"
CDS complement(61191..62048)
/locus_tag="Rleg_6632"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: ret:RHE_PE00369 sugar uptake ABC transporter,
permease protein;
SNP /replace=G;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984633.1"
/db_xref="GI:241666549"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022882"
/translation="MSNAAMIDRYRWWEIILIYCGIALFLFFVLSPFVEGFLVSLKPL
SQLFSSPYRFWPENGSFEAYRTMWISVPGFGRYIFNSFFISIIVTLIVLCLVIPAAYA
FAKFEFRGMGILLGAFLTVNMFSGAVLLIPLFRLMRSIGVLNTYLAMIVPGVAFLIPS
AIWLLRTYMIRIPQELNEAAYMDGASHFYTLRRVILPIAMPGIIVVAITTFIGAYAQQ
FIFALTFNSKTEYMPLPVGLFAYFGKQEVIWNELMAASFVGIAPAMVVIFFLQRYLVG
GLTAGAVKQ"
misc_feature complement(61197..62036)
/locus_tag="Rleg_6632"
/note="ABC-type sugar transport system, permease component
[Carbohydrate transport and metabolism]; Region: UgpE;
COG0395"
/db_xref="CDD:30744"
misc_feature complement(<61407..61757)
/locus_tag="Rleg_6632"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(61422..61424,61431..61436,61476..61478,
61527..61529,61536..61541,61551..61553,61557..61562,
61569..61571,61575..61577,61647..61649,61653..61658,
61665..61694,61698..61709,61737..61739,61752..61757))
/locus_tag="Rleg_6632"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(61647..61691)
/locus_tag="Rleg_6632"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(61455..61457,61467..61472,61488..61526))
/locus_tag="Rleg_6632"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(62045..62929)
/locus_tag="Rleg_6633"
/db_xref="GeneID:8022883"
CDS complement(62045..62929)
/locus_tag="Rleg_6633"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: rec:RHECIAT_PA0000294 probable sugar uptake ABC
transporter, permease protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984634.1"
/db_xref="GI:241666550"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022883"
/translation="MSVQRSTFIFACVLLLPAVLYVLAIVAYPLVDTFILSFTDASLR
KTTNWVGWANYEKIFNERFAEVIIRTFIWTFFSVALKMVIGTFGATMLNAAVPGRSLF
RLLTMPPWIVPMAIGIFMWGWMYNGQFGMISGMLQRFGLVDGPVAFLAYGNTAFWATI
ITDVWIGVPLVTIYFLAAIQSIPKDLYEAAWTDGAGRWYRFRRITLPLMVPAIITMSM
LSLIATFNSFDIIWILTQGGPSGETTTMIIDTYQTAIGSKKYGEGAARAVLICIFLSL
FCFAYFRVTRRLNPEKRA"
sig_peptide complement(62855..62929)
/locus_tag="Rleg_6633"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.976) with cleavage site probability 0.666 at
residue 25"
misc_feature complement(<62069..62758)
/locus_tag="Rleg_6633"
/note="ABC-type Fe3+ transport system, permease component
[Inorganic ion transport and metabolism]; Region: ThiP;
COG1178"
/db_xref="CDD:31371"
misc_feature complement(62093..62731)
/locus_tag="Rleg_6633"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(62093..62098,62105..62110,62117..62122,
62126..62131,62138..62143,62171..62176,62231..62236,
62243..62254,62273..62275,62282..62287,62327..62329,
62378..62380,62387..62392,62402..62404,62408..62413,
62420..62422,62429..62431,62435..62440,62564..62566,
62570..62575,62582..62611,62615..62626,62651..62653,
62666..62671,62678..62683))
/locus_tag="Rleg_6633"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(62237..62254,62564..62608))
/locus_tag="Rleg_6633"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(62141..62143,62171..62173,62180..62182,
62234..62236,62453..62455,62564..62566))
/locus_tag="Rleg_6633"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(62306..62308,62318..62323,62339..62377))
/locus_tag="Rleg_6633"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(62943..64100)
/locus_tag="Rleg_6634"
/db_xref="GeneID:8022884"
CDS complement(62943..64100)
/locus_tag="Rleg_6634"
/inference="protein motif:PFAM:PF01408"
/note="PFAM: oxidoreductase; Oxidoreductase domain;
KEGG: ret:RHE_PE00367 oxidoreductase protein"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="YP_002984635.1"
/db_xref="GI:241666551"
/db_xref="InterPro:IPR000683"
/db_xref="InterPro:IPR004104"
/db_xref="GeneID:8022884"
/translation="MKVGIIGLGFRLGYLGYVFKAIDGSFDIVGYVDPEPAGLPGLTE
KGISVGKAYGSPEELLASEKLDLLMIGSPNHLHLDHIRLGLQAGLKVFCEKPIVTTIA
ESIELAHLMAKFGHERLMVGLVLRYSPLYKDLRAIQAEGKLGQIVSIEASEHIEPYHG
AFFMRDWRRYERYSGSFMLEKCCHDLDLYNGVAGARPERVASFGGRKSFIPANDPARE
GINDLELFHRKPSGWMGSDKVFDSDADIIDYQVAIVEYANGVGMNFHTNLNVPDQFRR
FAIMGSRGMAEGDFVRGYLDVHEQLTGNKVLENKYAATELSQHYGADEQMASDLLESV
RTGLELPVSTLNALEAGILALAMDEARMKKAVVDLRPIWDRFDEALHARAA"
misc_feature complement(62988..64100)
/locus_tag="Rleg_6634"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:31017"
misc_feature complement(63735..64100)
/locus_tag="Rleg_6634"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
misc_feature complement(<63483..63686)
/locus_tag="Rleg_6634"
/note="Oxidoreductase family, C-terminal alpha/beta
domain; Region: GFO_IDH_MocA_C; cl11611"
/db_xref="CDD:209369"
gene 64433..65320
/locus_tag="Rleg_6635"
/db_xref="GeneID:8022885"
CDS 64433..65320
/locus_tag="Rleg_6635"
/EC_number="3.1.1.45"
/inference="protein motif:PRIAM:3.1.1.45"
/note="PFAM: dienelactone hydrolase;
KEGG: rec:RHECIAT_PA0000292 probable dienelactone
hydrolase protein"
/codon_start=1
/transl_table=11
/product="carboxymethylenebutenolidase"
/protein_id="YP_002984636.1"
/db_xref="GI:241666552"
/db_xref="InterPro:IPR002925"
/db_xref="GeneID:8022885"
/translation="MTRMTAKDFPQELLELYDYYAHGRITKREFLDRAGKFAVGGLTA
AAILSSLSPDYALATQVEFTDPDISAEYITYPSPKGNGDVRGYLVRPKNATGKVAAVV
VVHENRGLNPYIEDVARRVAKAGFIALAPDGLTSVGGYPGNDEKGRELQQKVDPEKLM
NDFFAAVEFLMHSDLTTGKVGITGFCYGGGVANAAAVAYPELAAAVPFYGRQPRAEDV
PKIKAPLLLHYAGLDKGINEGWPAYEAALKSSGKTFEAYVYPDVNHGFHNDSTPRYDE
AAAKLAWQRTVDWFTKYLA"
misc_feature 64640..65317
/locus_tag="Rleg_6635"
/note="Dienelactone hydrolase and related enzymes
[Secondary metabolites biosynthesis, transport, and
catabolism]; Region: COG0412"
/db_xref="CDD:30761"
gene complement(65386..66759)
/locus_tag="Rleg_6636"
/db_xref="GeneID:8022886"
CDS complement(65386..66759)
/locus_tag="Rleg_6636"
/inference="protein motif:PFAM:PF03972"
/note="PFAM: MmgE/PrpD family protein;
KEGG: oan:Oant_3094 MmgE/PrpD family protein"
/codon_start=1
/transl_table=11
/product="MmgE/PrpD family protein"
/protein_id="YP_002984637.1"
/db_xref="GI:241666553"
/db_xref="InterPro:IPR005656"
/db_xref="GeneID:8022886"
/translation="MATILRKIAEQLLSRTTFSDLAMDRARDAAVDTIGCMIAGRGDD
SVAALTRAFDGEIAGGGQARLVTGGSASPSLAALINATAAHALDFDDNFHPARAHASA
VLVSALLAVLTRGKVTSGRRFLEAYLAGLEAQAAVGFGVNPSHYNRGWHATATVGGIG
AAAGVSRLLGADENGLVAAMSLATSFACGPKGQFGTTAKPLHAGIAARNAVDAARMAL
AGMSGRPDILERPQGFLDLFGGDDAKGWDGLTFEAEHIIESRGVVTKRHPCCASTHRA
IDALLDLKQEHGLLADDIARIETKVGISAARNLAYPEPTDEMQARFSMQYCLATAFLR
GSLSLSDFTRQEIGRAEIREFMPRVDMQSYSADEEKGVERLPHVVTVTMRDGRILNKS
RLHAKGSLEAPMSVHEREVKFMDCLRWGNRNVSGAAFLRLRRLADLENLSGDDPFWSL
ITGRQSP"
misc_feature complement(65521..66753)
/locus_tag="Rleg_6636"
/note="MmgE/PrpD family; Region: MmgE_PrpD; cl00912"
/db_xref="CDD:199356"
gene 66868..67773
/locus_tag="Rleg_6637"
/db_xref="GeneID:8022887"
CDS 66868..67773
/locus_tag="Rleg_6637"
/inference="protein motif:PFAM:PF03466"
/note="PFAM: LysR substrate-binding; regulatory protein
LysR;
KEGG: dac:Daci_5821 LysR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002984638.1"
/db_xref="GI:241666554"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:8022887"
/translation="MARHTSAAISLKHIEAYDAIAATGSTIAASVELGISQSNASRLL
QQLEDYLGVRLFDREKNRLQPTREGLQLGPEIRAISDRLRALKTAAMELESGRSREIM
LRLAFPSSLSSTRIPKLVKNFLAANGPMRVEVASGSYLAIERMVADGEADLGFARLPL
MSPGLKQEKILSSRVICALHNDHPKAGSRQLSVGDLKGQDLIMLNRERPVRHELEALF
YKAGIRQRPLLEAHSVASACALAAQGLGIALVGEIIAREYATLPLQFIPLEPELPVAY
ALISGEKFPMPKAASLFLQSISDWA"
misc_feature 66892..67770
/locus_tag="Rleg_6637"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature <66961..67074
/locus_tag="Rleg_6637"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 67171..67749
/locus_tag="Rleg_6637"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature order(67216..67221,67225..67230,67237..67239,67249..67251,
67255..67275,67549..67566,67582..67587,67591..67596)
/locus_tag="Rleg_6637"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 67811..68716
/locus_tag="Rleg_6638"
/db_xref="GeneID:8022888"
CDS 67811..68716
/locus_tag="Rleg_6638"
/inference="protein motif:PFAM:PF03466"
/note="PFAM: LysR substrate-binding; regulatory protein
LysR;
KEGG: atc:AGR_L_2884 hypothetical protein"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002984639.1"
/db_xref="GI:241666555"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:8022888"
/translation="MNIKQLEVLRTLLATGSTIATAKTMGLSQSGVSRLLQQLEADLS
MSLFVRDKGRLIPTPEALLLARDAENILLAVDRMSGHAEDLRSGAAGPEIVRVGLPSS
MWEHFAPAMLADYFSDFPGVRIETFFETTTAINKLVEQRVIDFGFLRMEGESGPGIEV
ERVATGESVCVVPKDHPLAKLEEITVRNLRDVPLILIGRQRPNRMALDQTFRRAGIKQ
IVKIETHTNSSACSYVAHGLGVTIISSFYANLYRHLPVVHRPFVPRATQEFGLARAVG
TPLSIAAHALSDALKRQIKLSQKDI"
misc_feature 67811..68710
/locus_tag="Rleg_6638"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
sig_peptide 67811..67879
/locus_tag="Rleg_6638"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.812) with cleavage site probability 0.778 at
residue 23"
misc_feature 67817..67993
/locus_tag="Rleg_6638"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 68090..68680
/locus_tag="Rleg_6638"
/note="The C-terminal substrate-domain of LysR-type
transcriptional regulators involved in the catabolism of
opines and that of related regulators, contains the type 2
periplasmic binding fold; Region: PBP2_LysR_opines_like;
cd08415"
/db_xref="CDD:176107"
misc_feature order(68135..68140,68144..68149,68156..68158,68168..68170,
68174..68194,68471..68488,68504..68509,68513..68518)
/locus_tag="Rleg_6638"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176107"
gene 68895..69839
/locus_tag="Rleg_6639"
/db_xref="GeneID:8022889"
CDS 68895..69839
/locus_tag="Rleg_6639"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: atc:AGR_L_2886 probable peptide ABC transporter
permease protein Y4TP"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984640.1"
/db_xref="GI:241666556"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022889"
/translation="MLKFVLNRLLMALPTIVLVSVTVFTLIRFIPGDPAALMLGDMAE
PGQIAAMRSELGLDKSLPEQFLIWTANVVQGDFGRSIVNDEPVLPLVASRFLVSAEVV
VIAVLLASLIAVPAGVIAAWRQNSLTDLALVGTATILLSIPTFWLGLLLLLFFGLKLS
WLPVLGYVSIGSNLTGGLLYLVLPIMTLVIHEMGVLIRMARASTLEVLRLDYITHARA
KGLSESAVLWRHAFKNAFGPTWTVIGLILGNLLGGIAVIETVFTIPGLGRLMVDSIFA
RDYPVIQGCLLFVSLSYVLVNLVVDLLYPLFDPRVVAE"
misc_feature 68895..69827
/locus_tag="Rleg_6639"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppB; COG0601"
/db_xref="CDD:30946"
sig_peptide 68895..68972
/locus_tag="Rleg_6639"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.643) with cleavage site probability 0.515 at
residue 26"
misc_feature 69237..69722
/locus_tag="Rleg_6639"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(69237..69242,69255..69257,69288..69299,69303..69332,
69381..69386,69390..69392,69465..69470,69474..69476,
69480..69482,69489..69494,69498..69500,69510..69515,
69522..69524,69573..69575,69615..69620,69627..69629,
69648..69659,69666..69671,69696..69701)
/locus_tag="Rleg_6639"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(69306..69338,69381..69392,69648..69665)
/locus_tag="Rleg_6639"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(69390..69392,69450..69452,69666..69668,69690..69692,
69699..69701)
/locus_tag="Rleg_6639"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(69525..69563,69579..69584,69594..69596)
/locus_tag="Rleg_6639"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 69836..70654
/locus_tag="Rleg_6640"
/db_xref="GeneID:8022890"
CDS 69836..70654
/locus_tag="Rleg_6640"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: sme:SMc02028 peptide ABC transporter permease"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984641.1"
/db_xref="GI:241666557"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022890"
/translation="MKNVTFNGFIGSILIAALLISAAIGLFWTPYDPMKLGFTARLAA
PSSAHWLGTDEFGRDVLSRLIVGARASVWIGTLTVTFATVCGTLIGLVSGYARGWIDA
AIMAVNNALLAFPGILLALGLLAVFGANQYGIIFALGIAYSPSMARVVRGAVLSLRER
EFIEASKVMGNGELYTMFRHILPNCIAPITVLATSMFGWAILSESALSFLGLGVPPPA
PTWGNMLAAGRPFIEQAVWLGLFPGLAIALTLLGINLLGDALRDKLDPRMRGLK"
sig_peptide 69836..69904
/locus_tag="Rleg_6640"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.918) with cleavage site probability 0.650 at
residue 23"
misc_feature 69914..70630
/locus_tag="Rleg_6640"
/note="nickel ABC transporter, permease subunit NikC;
Region: nickel_nikC; TIGR02790"
/db_xref="CDD:131837"
misc_feature 70037..70615
/locus_tag="Rleg_6640"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(70085..70090,70097..70102,70115..70117,70145..70156,
70160..70189,70196..70201,70205..70207,70256..70261,
70265..70267,70271..70273,70280..70285,70289..70291,
70301..70306,70313..70315,70364..70366,70406..70411,
70418..70420,70439..70450,70457..70462,70502..70507,
70565..70570,70577..70582,70586..70591,70598..70603,
70610..70615)
/locus_tag="Rleg_6640"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(70163..70207,70439..70456)
/locus_tag="Rleg_6640"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(70205..70207,70241..70243,70457..70459,70496..70498,
70505..70507,70565..70567)
/locus_tag="Rleg_6640"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(70316..70354,70370..70375,70385..70387)
/locus_tag="Rleg_6640"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 70651..72279
/locus_tag="Rleg_6641"
/db_xref="GeneID:8022891"
CDS 70651..72279
/locus_tag="Rleg_6641"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: AAA ATPase;
KEGG: atc:AGR_L_2889 probable ATP-binding component of ABC
transporter"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984642.1"
/db_xref="GI:241666558"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022891"
/translation="MTNRTLLNVRNLSLQVTGTGVQVVKDVSFDIAPGEIFGIVGESG
SGKTLATRALISLLPAPIRVIGGSIAYKGRDVLSMNGAQLRQLRGAEIGVVFQEPMTS
LNPSMTVGRQLEEGLQLHTKLSKEERRKRILDMLNRVGIRDPAGALTSYPHEFSGGMR
QRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTQAEGTAVLLISHDLPMV
ARYTNRIVVMEKGVIVEEGRTADLLDAPQRAYTKKLLSSLPFRGETRTIDKTRAPMVS
ARDIVVDYPGRRSLMKKATPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLV
RESEGDIRFKGRSRDADWMDYRLNCQMVFQDPYSSLDPRMTILALVEEALRLVPDLDA
MTKRKRALETLEEVGLGSDYAGRYPHELSGGQRQRVAIARAIARRPKFLIADEPVSAL
DVTVRAQVLELLSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTVF
DRPKEAYTQRLLSAIPALDHNAQGGVILKWRLEN"
misc_feature 70657..72231
/locus_tag="Rleg_6641"
/note="ATPase components of various ABC-type transport
systems, contain duplicated ATPase [General function
prediction only]; Region: COG1123"
/db_xref="CDD:31320"
misc_feature 70666..71361
/locus_tag="Rleg_6641"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature 70771..70794
/locus_tag="Rleg_6641"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(70780..70785,70789..70797,70939..70941,71185..71190,
71287..71289)
/locus_tag="Rleg_6641"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 70930..70941
/locus_tag="Rleg_6641"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 71113..71142
/locus_tag="Rleg_6641"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 71173..71190
/locus_tag="Rleg_6641"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 71197..71208
/locus_tag="Rleg_6641"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 71275..71295
/locus_tag="Rleg_6641"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
misc_feature 71350..>71427
/locus_tag="Rleg_6641"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:214141"
misc_feature 71470..72156
/locus_tag="Rleg_6641"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature 71599..71622
/locus_tag="Rleg_6641"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(71608..71613,71617..71625,71740..71742,71980..71985,
72082..72084)
/locus_tag="Rleg_6641"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 71731..71742
/locus_tag="Rleg_6641"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 71908..71937
/locus_tag="Rleg_6641"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 71968..71985
/locus_tag="Rleg_6641"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 71992..72003
/locus_tag="Rleg_6641"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 72070..72090
/locus_tag="Rleg_6641"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
misc_feature 72145..>72231
/locus_tag="Rleg_6641"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:214141"
gene 72281..73144
/locus_tag="Rleg_6642"
/db_xref="GeneID:8022892"
CDS 72281..73144
/locus_tag="Rleg_6642"
/inference="similar to AA sequence:KEGG:SMc02026"
/note="KEGG: sme:SMc02026 putative beta-lactamase
precursor protein"
/codon_start=1
/transl_table=11
/product="putative beta-lactamase precursor protein"
/protein_id="YP_002984643.1"
/db_xref="GI:241666559"
/db_xref="GeneID:8022892"
/translation="MTTMIESAKLGERLNAICDAQPFVTRFMVRALGTGETIGRGADE
ETPSASTRKTSIMMAALKAAHEGRLDLDERITYEKRFAEEVASGMFRYLTPGIVISLR
DAITGMMVLSDNVCTKMVFERLTLDEVDSYCKSIGMTGTNHRFLIPPLALSPDHSLKA
VTTTTARDQVYLLQTILDAQDSREAADRLGCSQALSAYALQTLKNQILRYAIPSRLPF
GVLVAHKGGTGKRGRMNAGIVYRDGSPFYIIAAYTDDVPQEMPDGTPGYTVALETIGR
LSRACWDEFQS"
misc_feature 72284..73141
/locus_tag="Rleg_6642"
/note="Beta-lactamase class A [Defense mechanisms];
Region: PenP; COG2367"
/db_xref="CDD:32514"
misc_feature 72374..73033
/locus_tag="Rleg_6642"
/note="Beta-lactamase enzyme family; Region:
Beta-lactamase2; pfam13354"
/db_xref="CDD:205534"
gene 73169..74713
/locus_tag="Rleg_6643"
/db_xref="GeneID:8022893"
CDS 73169..74713
/locus_tag="Rleg_6643"
/inference="protein motif:PFAM:PF00496"
/note="PFAM: extracellular solute-binding protein family
5;
KEGG: smd:Smed_2436 extracellular solute-binding protein
family 5"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 5"
/protein_id="YP_002984644.1"
/db_xref="GI:241666560"
/db_xref="InterPro:IPR000914"
/db_xref="GeneID:8022893"
/translation="MHKLLLAGTMFMAMTGVIHARDIVVAQSSDLRSNNPGVNRDGNT
DGVILHIVEGLVGYANNGEVKPLLAKSFEVSADGLTYSFKLRDDVKFHNGKTLTADDV
VWNWNRYLKPETKWTCLPDFDGNGSVHVTGVKAVDASTVTITLEKPSAVFLGLMSRPE
CGYTGIISPESVGADGNFVKPIGTGPFKWDEWKKGEYIHLAKFDDYVSPENDGKPDGM
VGSKRPLVDGIKFMVIPDASTVKAGLQSGVLDTAEISPDLIPEFKTSDTMQLIVARNN
GKNLFYIQTRDKVLSNPGVRRAMAMALDLDQLVEAASNGTGAANGSMVSQDSLYFDDV
QKERLPYDVEAAKKELATAGYKGEPITIIANKRSNVPSFPAAVMAQAMMQQAGLNVQI
EVLDYATQVDRRRSGNYQIISQSVAPRLDPALMYGFYVGNKDKNASLMWDDPKAVELM
KAAYAEPDQTKRQAIFDEFHTLMLKEMPGIFLYDMVDVWGATKKLKGQPVWQSNARLW
EVSLDN"
sig_peptide 73169..73231
/locus_tag="Rleg_6643"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.999 at
residue 21"
misc_feature 73232..74659
/locus_tag="Rleg_6643"
/note="The substrate-binding component of an
uncharacterized ABC-type
nickel/dipeptide/oligopeptide-like import system contains
the type 2 periplasmic binding fold; Region:
PBP2_NikA_DppA_OppA_like_16; cd08502"
/db_xref="CDD:173867"
misc_feature 73355..74404
/locus_tag="Rleg_6643"
/note="Bacterial extracellular solute-binding proteins,
family 5 Middle; Region: SBP_bac_5; pfam00496"
/db_xref="CDD:201265"
gene 74844..76292
/locus_tag="Rleg_6644"
/db_xref="GeneID:8022894"
CDS 74844..76292
/locus_tag="Rleg_6644"
/inference="protein motif:TFAM:TIGR01891"
/note="TIGRFAM: amidohydrolase;
KEGG: sme:SMc02024 hypothetical protein"
/codon_start=1
/transl_table=11
/product="amidohydrolase"
/protein_id="YP_002984645.1"
/db_xref="GI:241666561"
/db_xref="InterPro:IPR010168"
/db_xref="GeneID:8022894"
/translation="MNFDAISSIAATIEKIKPDYTALSDSIWDFAELKFEERRSSQLL
ARTLEESGFAVRRGVAGMETAFIGESGSGKPVIAFLGEFDALAGMSQTADLAEPLPEA
AGATGHGCGHNLLGVGSLMAAVALARHLKENNLPGTVRYYGCPGEEGGSGKTFMVRAG
AFDDVDAALTWHPAPFNGVRSTNNLAVLEYYYRFRGVAAHAANSAHLGRSALDAVELM
NVGVNFLREHMPQDCRVHYAITDTGGRAANVVQASAEVLYLIRAPDMPQALELAGRVE
KVARGAAMMTETEVEIVFDTASTNLLPNITLETAMHENMVALGPIAFDEADIAFASKI
QDTFTPEAIRSSIRLYQIKGDVFSNAKVDGSAPLHTGLRDFEGQSHFRAGSTDVGDVS
WVTPTAQCWAPAWAIGTNPHTWQVVAQGKSPAAHKAMAHAAKTLATTGLALMSSSDLL
AAATAEWREKTSGKAYVCPIPDDVMPASVHSR"
misc_feature 74880..76112
/locus_tag="Rleg_6644"
/note="M20 Peptidase Aminoacylase 1-like protein 2
aminobenzoyl-glutamate utilization protein B subfamily;
Region: M20_Acy1L2_AbgB; cd05673"
/db_xref="CDD:193548"
misc_feature 74886..76091
/locus_tag="Rleg_6644"
/note="Metal-dependent
amidase/aminoacylase/carboxypeptidase [General function
prediction only]; Region: AbgB; COG1473"
/db_xref="CDD:31662"
misc_feature order(75171..75173,75177..75179,75285..75287,75357..75359,
76077..76079)
/locus_tag="Rleg_6644"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:193548"
gene 76437..77570
/locus_tag="Rleg_6645"
/db_xref="GeneID:8022895"
CDS 76437..77570
/locus_tag="Rleg_6645"
/inference="protein motif:PFAM:PF01094"
/note="PFAM: Extracellular ligand-binding receptor;
KEGG: mrd:Mrad2831_4419 putative amidase
expression-regulating protein"
/codon_start=1
/transl_table=11
/product="Extracellular ligand-binding receptor"
/protein_id="YP_002984646.1"
/db_xref="GI:241666562"
/db_xref="InterPro:IPR000709"
/db_xref="InterPro:IPR001828"
/db_xref="GeneID:8022895"
/translation="MTSSEWRVGVLFSRSGISEITETEHFLGTALAIEEVNAAGGVLG
KPIVPIAYDPGGDQTAYRNLARRLLADDDVNIIFGASMSASRKAVLPIVERHNGLLFY
PSMYEGFEYSENVVYTGATLNQNTFALAEYLLRHHGRRILFVGADYIYPRESNRVMRD
VVEAKGGEVVSERYLPLHADEQTLRSVISDIVRLKPDAIFSTIIGRPAQRFYRMYAET
GIDRRRVPIASLTMAESEIREIGADACTGHILSATYFQTVENEANERFVGAFKARFGQ
DFTTSVWSQPAYAQVHLFARALARAGSLETHRISEEILLEDFLAPEGRINFDADTRHL
WLHPRIGVARADGLFDIAWQAPGPIRPDPYLTASRFEDVWLEA"
misc_feature 76449..77477
/locus_tag="Rleg_6645"
/note="Periplasmic binding protein; Region: Peripla_BP_6;
pfam13458"
/db_xref="CDD:205636"
misc_feature 76455..77534
/locus_tag="Rleg_6645"
/note="Periplasmic binding domain of amidase (AmiC) that
belongs to the type I periplasmic binding fold protein
family; Region: PBP1_AmiC; cd06357"
/db_xref="CDD:107352"
misc_feature order(76677..76685,76740..76742,76749..76754,76878..76880,
76884..76886,77127..77129)
/locus_tag="Rleg_6645"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107352"
misc_feature order(76686..76688,76695..76697,76704..76706,76716..76718,
76761..76763,76767..76769,76881..76883,76893..76895,
77424..77426,77520..77522,77526..77531)
/locus_tag="Rleg_6645"
/note="regulator interaction site; other site"
/db_xref="CDD:107352"
gene 77572..78195
/locus_tag="Rleg_6646"
/db_xref="GeneID:8022896"
CDS 77572..78195
/locus_tag="Rleg_6646"
/inference="protein motif:PFAM:PF03861"
/note="PFAM: ANTAR domain protein;
KEGG: mrd:Mrad2831_4420 response regulator receiver/ANTAR
domain-containing protein"
/codon_start=1
/transl_table=11
/product="ANTAR domain protein with unknown sensor"
/protein_id="YP_002984647.1"
/db_xref="GI:241666563"
/db_xref="InterPro:IPR005561"
/db_xref="GeneID:8022896"
/translation="MAGPSRIVQDLRRARVLVVHPRDEDGDVLIAHLKRLGCEVRATW
PLPPALPPDVDTVFLHVEDVHVEHALQIIDLQQTAIIAIVTYESPTALQAIIDLNAHG
VISKPLRPLGILTQFALARYRHSYEKRLAGKVQKLEETLKSRRLVEKAVSALRVMNGL
DEEAAYKLLRDQATSKRVPMATIAESIIAAQDTMKSLGLSISAKTQP"
misc_feature 77608..78150
/locus_tag="Rleg_6646"
/note="Response regulator with putative antiterminator
output domain [Signal transduction mechanisms]; Region:
AmiR; COG3707"
/db_xref="CDD:33502"
misc_feature 77968..78135
/locus_tag="Rleg_6646"
/note="ANTAR domain; Region: ANTAR; pfam03861"
/db_xref="CDD:202788"
gene 78372..79229
/locus_tag="Rleg_6647"
/db_xref="GeneID:8022476"
CDS 78372..79229
/locus_tag="Rleg_6647"
/inference="protein motif:PFAM:PF00795"
/note="PFAM: Nitrilase/cyanide hydratase and
apolipoprotein N-acyltransferase;
KEGG: mrd:Mrad2831_4421 nitrilase/cyanide hydratase and
apolipoprotein N-acyltransferase"
/codon_start=1
/transl_table=11
/product="Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase"
/protein_id="YP_002984648.1"
/db_xref="GI:241666564"
/db_xref="InterPro:IPR003010"
/db_xref="GeneID:8022476"
/translation="METRLTVKTSAARTVTVATVQFEPIVGDRAGNLAAIERLVRSAK
TRGAEIVVLPELADSGYNFRDGDEVATLAGPVPGGPSAETLCRLAEELGLYIVSGVAE
QDGDRFYNSALLCGPEGYIGKYRKLHLWNNENRFFRKGDLGLPVFDLPFGRIGIAICY
DGWFPETFRQLALAGAELVCVPTNWVPMAGAESVPEPMANILHKAAAHTNGLYIACAD
RIGIERGQSFIGRSLIVGPQGWPVSGPASADREEILLAHIALSSVTETRTLNSFNHLL
GDRRADVYG"
misc_feature 78432..79226
/locus_tag="Rleg_6647"
/note="Predicted amidohydrolase [General function
prediction only]; Region: COG0388"
/db_xref="CDD:30737"
misc_feature 78432..79223
/locus_tag="Rleg_6647"
/note="Uncharacterized subgroup of the nitrilase
superfamily (putative class 13 nitrilases); Region:
nitrilase_2; cd07580"
/db_xref="CDD:143604"
misc_feature order(78534..78536,78747..78749,78759..78761,78768..78770,
78846..78851,78855..78860,78921..78923)
/locus_tag="Rleg_6647"
/note="putative active site [active]"
/db_xref="CDD:143604"
misc_feature order(78534..78536,78747..78749,78846..78848)
/locus_tag="Rleg_6647"
/note="catalytic triad [active]"
/db_xref="CDD:143604"
misc_feature order(78750..78761,78765..78767,78786..78794,78849..78851,
78855..78869,78876..78881,78972..78977,78981..78989,
78993..78998,79059..79064,79200..79214)
/locus_tag="Rleg_6647"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:143604"
gene 79259..80407
/locus_tag="Rleg_6648"
/db_xref="GeneID:8022558"
CDS 79259..80407
/locus_tag="Rleg_6648"
/inference="protein motif:PFAM:PF01094"
/note="PFAM: Extracellular ligand-binding receptor;
KEGG: mrd:Mrad2831_4422 extracellular ligand-binding
receptor"
/codon_start=1
/transl_table=11
/product="Extracellular ligand-binding receptor"
/protein_id="YP_002984649.1"
/db_xref="GI:241666565"
/db_xref="InterPro:IPR000709"
/db_xref="InterPro:IPR001828"
/db_xref="GeneID:8022558"
/translation="MQMKTIILTLASAAFATAAFAEDPIKIGVPVGLSGANSVVAPSV
VQAAELAVEEINAKGGVLGRPLELEIADDASGAAGAQKAFDSLVFQKEVNVIISMETS
AARNAGLPIISKGDVPYIYTSFYEGKSCNANLFVDAWVPEQQVPPVVDNFISKQGAKK
FFLIGSDYAFGRGMLTFAKGYIEKAGAQVVGEEYLPMDGSDWTAIISKVRSSGADAII
TSTAGGAPNVTLTKQLRSSGVTLPYGNLAVDEGTAKSMGADAKDIFLSASYVTGIDSP
ENKAFLSAMDKKFGKELRTPNDLSVPQYEAIYLYKAAVEKAGSTDTADVLKALPDASF
TGPRGKISMNKQHHAPLTMYLGQVKDDGSVAVVDSFKDVDPGDQCPNL"
sig_peptide 79259..79324
/locus_tag="Rleg_6648"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 22"
misc_feature 79328..80344
/locus_tag="Rleg_6648"
/note="Periplasmic binding protein; Region: Peripla_BP_6;
pfam13458"
/db_xref="CDD:205636"
misc_feature 79334..80332
/locus_tag="Rleg_6648"
/note="Type I periplasmic-binding protein of the nitrile
hydratase (NHase) system that selectively converts
nitriles to corresponding amides; Region: PBP1_NHase;
cd06358"
/db_xref="CDD:107353"
misc_feature order(79556..79558,79619..79621,79628..79633,79760..79762)
/locus_tag="Rleg_6648"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107353"
gene 80459..81292
/locus_tag="Rleg_6649"
/db_xref="GeneID:8022559"
CDS 80459..81292
/locus_tag="Rleg_6649"
/inference="protein motif:PFAM:PF02653"
/note="PFAM: inner-membrane translocator;
KEGG: mrd:Mrad2831_4423 inner-membrane translocator"
/codon_start=1
/transl_table=11
/product="inner-membrane translocator"
/protein_id="YP_002984650.1"
/db_xref="GI:241666566"
/db_xref="InterPro:IPR001851"
/db_xref="GeneID:8022559"
/translation="MTLFLDIVSTAAILFIVAAGLLAIFGVLKIINFAHGAWLTIGAY
CAVVVSRIGLNPWLAIPFAFLVGAILGGVAERFIVRPLYRRPLDAILATWGLGIVIGQ
LITLWFGRDVQFTPALLPGTFDLFGAGYSAYRLFAIVAAVGLGLGFTLLLDGTRLGLS
ARAVIMNETLARGLGIDTEKVRLATFMIGTGLAALAGVLLAPLTSVDPNMGVAWLTGA
FMLVMVAGSSFGALAAACLIFGAAQVLVSIYFSPILGGITVAVLCAITLRIRPKGFAR
A"
sig_peptide 80459..80569
/locus_tag="Rleg_6649"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.609) with cleavage site probability 0.314 at
residue 37"
misc_feature 80480..81280
/locus_tag="Rleg_6649"
/note="Transmembrane subunit (TM) of Escherichia coli LivH
and related proteins. LivH is one of two TMs of the E.
coli LIV-1/LS transporter, a Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette (ABC) transporter
involved in the uptake of...; Region: TM_PBP1_LivH_like;
cd06582"
/db_xref="CDD:119324"
misc_feature 80963..81019
/locus_tag="Rleg_6649"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119324"
gene 81285..83042
/locus_tag="Rleg_6650"
/db_xref="GeneID:8022560"
CDS 81285..83042
/locus_tag="Rleg_6650"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter; inner-membrane translocator;
SMART: AAA ATPase;
KEGG: mrd:Mrad2831_4424 ABC transporter"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984651.1"
/db_xref="GI:241666567"
/db_xref="InterPro:IPR001851"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022560"
/translation="MRDRQRLRLFLLLALALTALLLIVFGPMFLGRFSLNVLTRSMIY
AMLAVTVDLLWGYTGVLTFGQAAFFGVGAYATAMVLTHIGASPALFVVALVAAVLVPL
VLGLAVGWLSFYHGSTPLYATVISLVVPIVVTQLVFSGGTWTGSSSGLVGYETLPLGL
PGYFRLSGASLLVLAVLAIVFVRSDAGRLLVAIRDNEARVAYLGMNPARLKIVLTGVL
AGVCGLAGFLFANASGVVAPENTGFVFGTELVVWTALGGRGTIIGPLFGAIGIDYLSA
SLSGDLPFLWQLIIGALFVAMIILLPGGLASLVTRFLQSANSSSTLKSLPTRIVAKDG
ALAGKSLLSIRGLGKSYGSFSVLKGIDLEIGAGELVSLVGPNGAGKTTLMRCLSDGTQ
QIEGQVDIIGTNIAGRAPERIVALGVGRKFQVASIFDSMTIGECLKMARFSRERPNAM
RSLGEIMLPAAAAEILTLTGMADMLDKPVLLLSHGQRQALELAMVVALEPRIILLDEP
TAGLTKTERMTIGTILKKLTDEMGFAAILVEHDLDFVRNISSRIVVLHQGKLVLDGTV
NDVVNSETVRTIYAGGAHG"
sig_peptide 81285..81389
/locus_tag="Rleg_6650"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.996) with cleavage site probability 0.347 at
residue 35"
misc_feature 81408..82205
/locus_tag="Rleg_6650"
/note="Transmembrane subunit (TM) of Escherichia coli LivM
and related proteins. LivM is one of two TMs of the E.
coli LIV-1/LS transporter, a Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette (ABC) transporter
involved in the uptake of...; Region: TM_PBP1_LivM_like;
cd06581"
/db_xref="CDD:119323"
misc_feature 81876..81932
/locus_tag="Rleg_6650"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119323"
misc_feature 82302..83027
/locus_tag="Rleg_6650"
/note="urea ABC transporter, ATP-binding protein UrtD;
Region: urea_trans_UrtD; TIGR03411"
/db_xref="CDD:163251"
misc_feature 82308..83009
/locus_tag="Rleg_6650"
/note="The Mj1267/LivG ABC transporter subfamily is
involved in the transport of the hydrophobic amino acids
leucine, isoleucine and valine. MJ1267 is a
branched-chain amino acid transporter with 29% similarity
to both the LivF and LivG components of the E; Region:
ABC_Mj1267_LivG_branched; cd03219"
/db_xref="CDD:72978"
misc_feature 82404..82427
/locus_tag="Rleg_6650"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72978"
misc_feature order(82413..82418,82422..82430,82551..82553,82800..82805,
82902..82904)
/locus_tag="Rleg_6650"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72978"
misc_feature 82542..82553
/locus_tag="Rleg_6650"
/note="Q-loop/lid; other site"
/db_xref="CDD:72978"
misc_feature 82728..82757
/locus_tag="Rleg_6650"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72978"
misc_feature 82788..82805
/locus_tag="Rleg_6650"
/note="Walker B; other site"
/db_xref="CDD:72978"
misc_feature 82812..82823
/locus_tag="Rleg_6650"
/note="D-loop; other site"
/db_xref="CDD:72978"
misc_feature 82890..82910
/locus_tag="Rleg_6650"
/note="H-loop/switch region; other site"
/db_xref="CDD:72978"
gene 83035..83742
/locus_tag="Rleg_6651"
/db_xref="GeneID:8022561"
CDS 83035..83742
/locus_tag="Rleg_6651"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: AAA ATPase;
KEGG: mrd:Mrad2831_4425 ABC transporter"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984652.1"
/db_xref="GI:241666568"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022561"
/translation="MADTFKLKLGEVSSGYGAVDVVNGVSLAIRPGEIFALMGKNGMG
KTTLLKTILGFLRAGKGTIEVDGASITDRKPAELIASGIGYAPQELPLFQDLSIRDNL
RLALKGDLDLPSALERVYGYFPFLKDRLAQKAGTLSGGEQKMLILARALMLRPKLLLI
DEISEGLQPSVVQNIAKALRDDREKRGTTILLVEQNLDFALSVADRWAILKLGAIEDE
SPNGPDSRDHVLQHLKI"
misc_feature 83053..83694
/locus_tag="Rleg_6651"
/note="ABC-type branched-chain amino acid transport
systems, ATPase component [Amino acid transport and
metabolism]; Region: LivF; COG0410"
/db_xref="CDD:30759"
misc_feature 83053..83679
/locus_tag="Rleg_6651"
/note="ATP-binding cassette domain of branched-chain amino
acid transporter; Region: ABC_TM1139_LivF_branched;
cd03224"
/db_xref="CDD:213191"
misc_feature 83149..83172
/locus_tag="Rleg_6651"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213191"
misc_feature order(83158..83163,83167..83175,83296..83298,83515..83520,
83617..83619)
/locus_tag="Rleg_6651"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213191"
misc_feature 83287..83298
/locus_tag="Rleg_6651"
/note="Q-loop/lid; other site"
/db_xref="CDD:213191"
misc_feature 83443..83472
/locus_tag="Rleg_6651"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213191"
misc_feature 83503..83520
/locus_tag="Rleg_6651"
/note="Walker B; other site"
/db_xref="CDD:213191"
misc_feature 83527..83538
/locus_tag="Rleg_6651"
/note="D-loop; other site"
/db_xref="CDD:213191"
misc_feature 83605..83625
/locus_tag="Rleg_6651"
/note="H-loop/switch region; other site"
/db_xref="CDD:213191"
gene 83780..84916
/locus_tag="Rleg_6652"
/db_xref="GeneID:8022562"
CDS 83780..84916
/locus_tag="Rleg_6652"
/inference="protein motif:PFAM:PF01425"
/note="PFAM: Amidase;
KEGG: reh:H16_A1469 amidase"
/codon_start=1
/transl_table=11
/product="Amidase"
/protein_id="YP_002984653.1"
/db_xref="GI:241666569"
/db_xref="InterPro:IPR000120"
/db_xref="GeneID:8022562"
/translation="MPYLDADVGSAAIGPLSGLRLAVKDLFDVAGYPTAAGNAAVLAA
SGIKTSTAPLVQTLLDAGACFVGKTNTDELAYSLIGGNIHFGMPINPRDPHLVPGGSS
SGSAVAVAAGLADIGLGTDTSGSIRLPAAVNGLIGWRPTHGSLDNRALRPLAPSFDVP
GFMTRSLEPMAAVMSAVGMPAANDQPSSILIPKDIFATIDDAVADEMIARLRSAGMPI
RMTNAIASFSLADLALTFITILQREAWESNRTLFERSPEAIAPNIAARLLSGSHLVDE
EVREAGRIRKLFSAEIDRLLRENVVVALPTLATSPPRRDAEPESFAAFRSACIKLLCL
SGLSGCPQLAFPIVNCAGSGSLSLFGARGADRMLIDLARRLGAG"
misc_feature 83780..84913
/locus_tag="Rleg_6652"
/note="Amidase; Region: Amidase; cl11426"
/db_xref="CDD:212316"
misc_feature 83810..84904
/locus_tag="Rleg_6652"
/note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
and related amidases [Translation, ribosomal structure and
biogenesis]; Region: GatA; COG0154"
/db_xref="CDD:30503"
gene complement(85033..85467)
/locus_tag="Rleg_6653"
/db_xref="GeneID:8022563"
CDS complement(85033..85467)
/locus_tag="Rleg_6653"
/inference="protein motif:PFAM:PF04657"
/note="PFAM: protein of unknown function DUF606;
KEGG: ret:RHE_PE00365 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984654.1"
/db_xref="GI:241666570"
/db_xref="InterPro:IPR006750"
/db_xref="GeneID:8022563"
/translation="MFILLACLGGVLVGLSRQLNGRLSVSTTPLIASFWNHAIGFAAL
TCLGLFVGGLLPAGAAEAPWYAYLGGPIGVIFVAAGSWVIARIGAVNSALLIIGGQMV
TGVAFDYISAVPASFWANATGIVLIVGGMMVSRGRRKAGGSQ"
misc_feature complement(85069..85464)
/locus_tag="Rleg_6653"
/note="Protein of unknown function, DUF606; Region:
DUF606; pfam04657"
/db_xref="CDD:191054"
gene complement(85470..85952)
/locus_tag="Rleg_6654"
/db_xref="GeneID:8022564"
CDS complement(85470..85952)
/locus_tag="Rleg_6654"
/inference="protein motif:PFAM:PF04657"
/note="PFAM: protein of unknown function DUF606;
KEGG: ret:RHE_PE00364 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984655.1"
/db_xref="GI:241666571"
/db_xref="InterPro:IPR006750"
/db_xref="GeneID:8022564"
/translation="MTIEARSSHPIYFVGAFATGGLLTFMVHLNGELARYGNPLFSSW
TAHGTGIIAAVLLLLMVHRRRTPRVEKAPDAPWWAYLGGISGAATVILTSTAVNSPLG
LSGTLALGLAGQVAFSVAADSWGLFGLPKRRPDRRDIVALGLVVTGAALIILFGRGAA
"
misc_feature complement(85500..85922)
/locus_tag="Rleg_6654"
/note="Protein of unknown function, DUF606; Region:
DUF606; pfam04657"
/db_xref="CDD:191054"
gene 86167..86658
/locus_tag="Rleg_6655"
/db_xref="GeneID:8022565"
CDS 86167..86658
/locus_tag="Rleg_6655"
/inference="protein motif:PFAM:PF03167"
/note="PFAM: uracil-DNA glycosylase;
KEGG: G:T/U mismatch-specific DNA glycosylase"
/codon_start=1
/transl_table=11
/product="uracil-DNA glycosylase"
/protein_id="YP_002984656.1"
/db_xref="GI:241666572"
/db_xref="InterPro:IPR005122"
/db_xref="GeneID:8022565"
/translation="MSEILAPGLSVVFCGLNPALSAVRDGHNFSNPSNRFWRVLHLAG
FTPRLLRADEERELLQYGCGLTSAVSRPTKSASELKKQDYRSAAPVLENKIRKIAPAN
LAFLGKAAYAAISLRADVEWGRQPEVFAGADVWLLPNPSGLNRAFTLTTLTEHYLDLR
LTL"
misc_feature 86167..86646
/locus_tag="Rleg_6655"
/note="G:T/U mismatch specific DNA glcosylase (MUG);
Region: UDG_F2_MUG; cd10028"
/db_xref="CDD:198426"
sig_peptide 86167..86232
/locus_tag="Rleg_6655"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.677) with cleavage site probability 0.607 at
residue 22"
misc_feature order(86212..86217,86221..86223,86260..86268,86485..86493,
86530..86532,86578..86583,86587..86595)
/locus_tag="Rleg_6655"
/note="active site"
/db_xref="CDD:198426"
misc_feature order(86287..86292,86623..86628,86635..86637)
/locus_tag="Rleg_6655"
/note="SUMO-1 interface [polypeptide binding]; other site"
/db_xref="CDD:198426"
gene 86711..88471
/locus_tag="Rleg_6656"
/db_xref="GeneID:8022566"
CDS 86711..88471
/locus_tag="Rleg_6656"
/inference="protein motif:PFAM:PF03473"
/note="PFAM: MOSC domain containing protein;
Oxidoreductase FAD-binding domain protein; oxidoreductase
FAD/NAD(P)-binding domain protein; ferredoxin;
KEGG: mno:Mnod_6438 MOSC domain containing protein"
/codon_start=1
/transl_table=11
/product="MOSC domain containing protein"
/protein_id="YP_002984657.1"
/db_xref="GI:241666573"
/db_xref="InterPro:IPR000951"
/db_xref="InterPro:IPR001041"
/db_xref="InterPro:IPR001433"
/db_xref="InterPro:IPR005302"
/db_xref="InterPro:IPR008333"
/db_xref="GeneID:8022566"
/translation="MGRLLSVNVGLPREINWQGKIVNTAIWKTPVDGPRMVRRLNVDG
DGQGDLAGHGGERRAVFVYQTDSYGYWQEHLRRDDFVYGQFGENFTVDGLPDVEVCIG
DRYRIGGALFEVTQPRVTCYRLGIRMEEPEMAALVVKHGRPGFYFRVLGEGEVQAGDE
ITKVGSGPEGMSVFEINALLYMPGHPHDQLERALRIPALSAGWRGSFEALLKQERKEG
ATTGNAGLAAASGPPPAWRGFRPLRVSRKVRESGSVVSLVLEPADGQPVAAALPGQFV
VLRFGPASAPALTRSYSLSGEPGGTHYRVSVKREAHGAASGYIDEELRVGDIVQASAA
RGSFTLRPGDTPVVLLSAGIGVTPVLAMLHVLAAEASSREVWWLYGTRNGREHPFAEE
ARGLLKRLPHHHSHVCYSTPDPKDRPDIDFDARGHLNAQALKSLNLPRDCDVYVCGPS
SFMSDLSAGLAALGIAPNRIHTEMFSAGPAMTPGIAASPRRPPHLPKGLAGSGPLVSF
ARTGLNVRWEPTFQSLLELAEACDVPVRWSCRTGVCHTCETGLVEGRVRYRPDPIDAA
ADGNVLICCSKPDGDIVIDL"
misc_feature 86717..87346
/locus_tag="Rleg_6656"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG2258"
/db_xref="CDD:32439"
misc_feature 86879..87196
/locus_tag="Rleg_6656"
/note="MOSC domain; Region: MOSC; pfam03473"
/db_xref="CDD:202655"
misc_feature 87218..87343
/locus_tag="Rleg_6656"
/note="3-alpha domain; Region: 3-alpha; pfam03475"
/db_xref="CDD:202656"
misc_feature 87416..88297
/locus_tag="Rleg_6656"
/note="Flavodoxin reductases (ferredoxin-NADPH reductases)
family 1 [Energy production and conversion]; Region: Hmp;
COG1018"
/db_xref="CDD:31221"
misc_feature 87416..88153
/locus_tag="Rleg_6656"
/note="FAD_NAD(P)H binding domain of flavohemoglobin.
Flavohemoglobins have a globin domain containing a B-type
heme fused with a ferredoxin reductase-like
FAD/NAD-binding domain. Flavohemoglobins detoxify nitric
oxide (NO) via an NO dioxygenase reaction. The...; Region:
flavohem_like_fad_nad_binding; cd06184"
/db_xref="CDD:99781"
misc_feature order(87533..87535,87578..87589,87626..87628,87632..87634,
87647..87658,87779..87781,88133..88135)
/locus_tag="Rleg_6656"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99781"
misc_feature order(87578..87580,87584..87589)
/locus_tag="Rleg_6656"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99781"
misc_feature order(87647..87649,87656..87658,87665..87667,87686..87688,
87710..87712,87716..87718)
/locus_tag="Rleg_6656"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99781"
misc_feature order(87755..87757,87767..87778,87782..87784)
/locus_tag="Rleg_6656"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99781"
misc_feature order(87770..87775,87848..87856,88052..88057)
/locus_tag="Rleg_6656"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99781"
misc_feature 88148..88150
/locus_tag="Rleg_6656"
/note="Heme binding pocket [chemical binding]; other
site"
/db_xref="CDD:99781"
misc_feature <88274..88465
/locus_tag="Rleg_6656"
/note="2Fe-2S iron-sulfur cluster binding domain.
Iron-sulfur proteins play an important role in electron
transfer processes and in various enzymatic reactions. The
family includes plant and algal ferredoxins, which act as
electron carriers in photosynthesis...; Region: fer2;
cd00207"
/db_xref="CDD:29262"
misc_feature order(88313..88318,88325..88327,88334..88336,88340..88351,
88427..88432)
/locus_tag="Rleg_6656"
/note="catalytic loop [active]"
/db_xref="CDD:29262"
misc_feature order(88325..88327,88340..88342,88349..88351,88430..88432)
/locus_tag="Rleg_6656"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:29262"
gene 88560..89405
/locus_tag="Rleg_6657"
/db_xref="GeneID:8022567"
CDS 88560..89405
/locus_tag="Rleg_6657"
/inference="protein motif:PFAM:PF02678"
/note="PFAM: pirin;
KEGG: sme:SMa1262 hypothetical protein"
/codon_start=1
/transl_table=11
/product="pirin"
/protein_id="YP_002984658.1"
/db_xref="GI:241666574"
/db_xref="InterPro:IPR003829"
/db_xref="GeneID:8022567"
/translation="MLLKGERTFVVRDMGGFVTHLNMPGWLKPNSTDHGHGPLAMVVE
SILDPGRLIAMHEHRNDEIISWVPEGVMRHDDKAAGRLVIDRDHLMVMNAGASFWHSE
ETLASDPPLRMLQILVRPYAVDLEPKIQHGPMVAAAANVWRHLVGPEGEGAPFYVRSA
IDVFDIRLDAGIRVEFPQKHGRDLYFYVFSGFVVVGTRPFAEGEQGLHLSGDKLEVEA
QSASTLVAFLLDPNATITKQGTVGDHKKIPPAIIIRAFLRWRKFRHMWRRHLSHRRSK
TEKAI"
misc_feature 88581..88913
/locus_tag="Rleg_6657"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:212615"
misc_feature 88599..89348
/locus_tag="Rleg_6657"
/note="Pirin-related protein [General function prediction
only]; Region: COG1741"
/db_xref="CDD:31927"
gene 89466..89684
/locus_tag="Rleg_6658"
/db_xref="GeneID:8022568"
CDS 89466..89684
/locus_tag="Rleg_6658"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000289"
/note="KEGG: rec:RHECIAT_PA0000289 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984659.1"
/db_xref="GI:241666575"
/db_xref="GeneID:8022568"
/translation="MPTVAATPITPPDQHVVTAREAIEPLYEKLELQTESLVLSAALE
AGWSSDEATKALATLRLQDALSTLGRTA"
gene complement(89840..90361)
/locus_tag="Rleg_6659"
/db_xref="GeneID:8022569"
CDS complement(89840..90361)
/locus_tag="Rleg_6659"
/inference="similar to AA sequence:KEGG:RHE_PE00395"
/note="KEGG: ret:RHE_PE00395 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984660.1"
/db_xref="GI:241666576"
/db_xref="GeneID:8022569"
/translation="MTEDATDPVVVHELQLQRSSWVPNNPKLSVLIYRRALSAAAGSK
SFEDLFASNGWTGIWRNGIFTYDHYHSGAHEVLGIARGTAKLLLGGPEGKEIDVAAGD
CLILPAGTGHRNLGASADFSVVGGYPPGQHADILTSAPSEEQLLTIAELSIPSSDPIE
GADGYLVRAWRRD"
misc_feature complement(89852..90331)
/locus_tag="Rleg_6659"
/note="Cupin domain; Region: Cupin_2; cl09118"
/db_xref="CDD:214151"
gene complement(90456..90866)
/locus_tag="Rleg_6660"
/db_xref="GeneID:8022570"
CDS complement(90456..90866)
/locus_tag="Rleg_6660"
/inference="similar to AA sequence:KEGG:AGR_L_1428"
/note="KEGG: atc:AGR_L_1428 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984661.1"
/db_xref="GI:241666577"
/db_xref="InterPro:IPR013417"
/db_xref="GeneID:8022570"
/translation="MTKISNGKNLEAGEPHWIEWVTGVVSAVIVLGVIAWIGKDALVD
RDSSPNLVGVVLQTEKRGDGFQVLFEIRNDSSATASQVTVQGEIREQDSVLENVETVL
DYVPGHSKAKGGLIFQQDPAGKTLTVRASSFDEP"
misc_feature complement(90459..90821)
/locus_tag="Rleg_6660"
/note="TIGR02588 family protein; Region: TIGR02588"
/db_xref="CDD:131637"
gene complement(90873..91742)
/locus_tag="Rleg_6661"
/db_xref="GeneID:8022571"
CDS complement(90873..91742)
/locus_tag="Rleg_6661"
/inference="protein motif:TFAM:TIGR02587"
/note="TIGRFAM: hypothetical protein;
KEGG: mes:Meso_0637 putative hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984662.1"
/db_xref="GI:241666578"
/db_xref="InterPro:IPR013416"
/db_xref="GeneID:8022571"
/translation="MSVAITREDFDRSKFFAGIARGIAGALLFALPMFMTMEMWELGF
YMDRSRLFLLLIVNIPLLVILSDRIGFERTSTWRQAIRDASIAYGLGVLGSALILFAM
GVLKYDQSPHEIIGMIAIQSIPASIGAMLGRSQLGGQSDDGDDAKEGDSDDPIHERET
SYAGELFLMAVGALFLNLNVAPTEEMILLSYKMTPWHALLMIAASLAVMHGFVYALSF
KGSHDLAEGTPSWHAFVRFTLPGYVIAGLISAYCLWTFHRTYDIGSTQILMAVVVLSF
PGAIGAAAARLIL"
misc_feature complement(90912..91649)
/locus_tag="Rleg_6661"
/note="Putative integral membrane protein (DUF2391);
Region: DUF2391; pfam09622"
/db_xref="CDD:150326"
gene complement(91913..92800)
/locus_tag="Rleg_6662"
/db_xref="GeneID:8022572"
CDS complement(91913..92800)
/locus_tag="Rleg_6662"
/inference="protein motif:PFAM:PF06724"
/note="PFAM: protein of unknown function DUF1206;
KEGG: ret:RHE_PF00085 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984663.1"
/db_xref="GI:241666579"
/db_xref="InterPro:IPR009597"
/db_xref="GeneID:8022572"
/translation="MKTFIAEKSELFCWALVKSAAGEPEMTRSKFEWLARAGYSARGI
VFLLVAALAVFSSFGGGKADTKSALDAVLEQPLGRVWLGLIGLGLLGFVAWRLAQSIA
NADNHDHSVKSYLIRAALLGSAVTYLGLAIYAFQDALGFGSGGDGGEKGLAAWVMSQP
FGRFLAGAIGLGFVIGGAVTALKGITRRFERYLTLGQSRPLLLVCIYGLVSRGVVFVI
VGIFFCYAAFTVDPGQAGSISDALTFVRQLPFGAVLYLVVAIGLAAFGIYNLVEARYR
TVSTPNLSQVRSELPLSHN"
misc_feature complement(92498..92695)
/locus_tag="Rleg_6662"
/note="Domain of Unknown Function (DUF1206); Region:
DUF1206; pfam06724"
/db_xref="CDD:203505"
misc_feature complement(92234..92452)
/locus_tag="Rleg_6662"
/note="Domain of Unknown Function (DUF1206); Region:
DUF1206; pfam06724"
/db_xref="CDD:203505"
misc_feature complement(91973..>92128)
/locus_tag="Rleg_6662"
/note="Domain of Unknown Function (DUF1206); Region:
DUF1206; pfam06724"
/db_xref="CDD:203505"
gene complement(93019..93552)
/locus_tag="Rleg_6663"
/db_xref="GeneID:8022573"
CDS complement(93019..93552)
/locus_tag="Rleg_6663"
/inference="protein motif:PFAM:PF00583"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: pag:PLES_10311 putative acetyltransferase, GNAT
family"
/codon_start=1
/transl_table=11
/product="GCN5-related N-acetyltransferase"
/protein_id="YP_002984664.1"
/db_xref="GI:241666580"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:8022573"
/translation="MQLETERLILRPWQQQDRKPFAAINAEPDVVRYLNPLTDEQSNA
MLDRIDLHFEDHGWGFWALEEKASGALIGMCGLAKVSPALPFAPAVEIGWRLSASRHG
AGYAREAAERSLDFAFNELKLDRIVSFTVPANSNSWGLMRRLGMNRIGEFDHPNLAEG
HPLRRHVLYELRSPNDI"
misc_feature complement(93115..93534)
/locus_tag="Rleg_6663"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_3; pfam13302"
/db_xref="CDD:205482"
misc_feature complement(93115..93357)
/locus_tag="Rleg_6663"
/note="Acetyltransferase (GNAT) family; Region:
Acetyltransf_1; pfam00583"
/db_xref="CDD:201324"
gene complement(93572..94390)
/locus_tag="Rleg_6664"
/db_xref="GeneID:8022574"
CDS complement(93572..94390)
/locus_tag="Rleg_6664"
/inference="protein motif:TFAM:TIGR03214"
/note="TIGRFAM: allantoin catabolism protein;
PFAM: protein of unknown function DUF861 cupin_3; cupin;
KEGG: rec:RHECIAT_PA0000276 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984665.1"
/db_xref="GI:241666581"
/db_xref="InterPro:IPR008579"
/db_xref="InterPro:IPR013096"
/db_xref="InterPro:IPR017627"
/db_xref="GeneID:8022574"
/translation="MNRDYYSKLGGLPPQTELLSSKAVFTTAYAVIPRSVMTDIVTSV
LPHWTGTRAWVLSRPLSGFSETFSQYVMEVQPGGGSDRPEPDKRAEAVLFVVEGEMTV
ELEGVSHALRAGSFAYIPAGSVWRLKNGGSTAAKFHWIRKAFQEVEGLEPPPAIVTHE
DQHPISAMPDTDGRWGTTRFIDAADVRYDMHVNIVTLEPGAVIPFMETHVMEHGLYVL
EGKAVYRLNQDWVEVEAGDFMWLRSFCPQACYAGGPGRFRYLLYKDVNRHMTLW"
misc_feature complement(93575..94387)
/locus_tag="Rleg_6664"
/note="hypothetical protein; Provisional; Region:
PRK11171"
/db_xref="CDD:183011"
misc_feature complement(93971..94183)
/locus_tag="Rleg_6664"
/note="Cupin domain; Region: Cupin_2; pfam07883"
/db_xref="CDD:203791"
misc_feature complement(93611..93814)
/locus_tag="Rleg_6664"
/note="Cupin domain; Region: Cupin_2; pfam07883"
/db_xref="CDD:203791"
gene complement(94594..96429)
/locus_tag="Rleg_6665"
/db_xref="GeneID:8022575"
CDS complement(94594..96429)
/locus_tag="Rleg_6665"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter; Oligopeptide/dipeptide ABC
transporter domain protein;
SMART: AAA ATPase;
KEGG: rec:RHECIAT_PA0000275 putative peptide ABC
transporter, ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984666.1"
/db_xref="GI:241666582"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013563"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022575"
/translation="MASAQTQPIQATTDVLSVEGLTTSFLVDGVWKPVVRDVSFTVVP
AETVAIVGESGSGKSVTSLSIMRLLQADTSRVEGRVMLGGRDLLALPENAMRQVRGNE
VAMIFQEPMTSLNPLFTIGDQISEALLCHSDMSKTDAKAETIRLLEKVRIPSAASRFG
EYPHRFSGGMRQRVMIAMALASRPKLLIADEPTTALDVTIQGQILDLIKMLQDEEGTS
VLFITHDMGVVAEIADRTVVMYRGEQVESGATADIFHRGKHPYTRALLSAVPVLGSMQ
GRQRPLRFPVVNTATGESDIPVEVTDTVAATPVLQVKNLTKRFDIHSGLFGRLTSRVH
AVENVSFDLHAGETLSLVGESGCGKSTTGRAIMRLIEPQAGSVLVEGREVLGLDRKDL
REMRKSVQMIFQDPFASLNPRMTVGAAIAEPYLEHRMGNSKQAKDVVADLLVKVGLSA
DMAARYPHEFSGGQRQRICIARALALQPKVIVADESVSALDVSIKAQVINLMLDLQQS
LNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVFENPQHPYTKKLIAAVPVP
DPDRRHEKRMVANDEIKSPMRPVDYQPASTSYREVGPGHLVMADR"
misc_feature complement(94609..96396)
/locus_tag="Rleg_6665"
/note="glutathione transporter ATP-binding protein;
Provisional; Region: PRK10261"
/db_xref="CDD:182342"
misc_feature complement(95686..96387)
/locus_tag="Rleg_6665"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature complement(96253..96276)
/locus_tag="Rleg_6665"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(order(95758..95760,95857..95862,96106..96108,
96250..96258,96262..96267))
/locus_tag="Rleg_6665"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature complement(96106..96117)
/locus_tag="Rleg_6665"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature complement(95905..95934)
/locus_tag="Rleg_6665"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature complement(95857..95874)
/locus_tag="Rleg_6665"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature complement(95839..95850)
/locus_tag="Rleg_6665"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(95752..95772)
/locus_tag="Rleg_6665"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature complement(<95611..95697)
/locus_tag="Rleg_6665"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; pfam08352"
/db_xref="CDD:203916"
misc_feature complement(94804..95505)
/locus_tag="Rleg_6665"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature complement(95350..95373)
/locus_tag="Rleg_6665"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(order(94876..94878,94975..94980,95218..95220,
95347..95355,95359..95364))
/locus_tag="Rleg_6665"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature complement(95218..95229)
/locus_tag="Rleg_6665"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature complement(95023..95052)
/locus_tag="Rleg_6665"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature complement(94975..94992)
/locus_tag="Rleg_6665"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature complement(94957..94968)
/locus_tag="Rleg_6665"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(94870..94890)
/locus_tag="Rleg_6665"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature complement(<94705..94815)
/locus_tag="Rleg_6665"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; pfam08352"
/db_xref="CDD:203916"
gene complement(96462..97658)
/locus_tag="Rleg_6666"
/db_xref="GeneID:8022576"
CDS complement(96462..97658)
/locus_tag="Rleg_6666"
/inference="protein motif:PFAM:PF03841"
/note="PFAM: L-seryl-tRNA selenium transferase; aromatic
amino acid beta-eliminating lyase/threonine aldolase;
Cys/Met metabolism pyridoxal-phosphate-dependent protein;
KEGG: rec:RHECIAT_PA0000274 L-seryl-tRNA(sec) selenium
transferase protein"
/codon_start=1
/transl_table=11
/product="L-seryl-tRNA selenium transferase"
/protein_id="YP_002984667.1"
/db_xref="GI:241666583"
/db_xref="InterPro:IPR000277"
/db_xref="InterPro:IPR001597"
/db_xref="InterPro:IPR004534"
/db_xref="GeneID:8022576"
/translation="MSTDIRPSLGLRPVINVSGTMTSLGASIVVPEAISAMASILPHF
VEINDLQRKASGVIARLTGGEAGFVTASCSAGISLAVAGAITGNNLLAIERLPDVVPE
KNEVLVQMGHVVSYGAPVDQAIRLAGGKVVLVGQATSTHRFHMENAITDKTAAAVYVV
SHHVVDYGLLNLKEFVEIAHAKGVPVIVDAASEYDLRIFLEQGADIALYSGHKFLGGP
TSGIVAGSKELVRHAFLQNMGIGRGMKVGKESIFGVMAALEAWENRDHAGIRERETGY
LNLWKRTLDGRPGLTALIEPDPTHNPLERLRLIVDPEQAHITAWDLADALAKGSPPII
VRDHEVEHRYFYLDPCNLHPGEETVVAERLAQELDKARASNEIIATPIENRSRHRFDG
ALRWPD"
misc_feature complement(96492..97658)
/locus_tag="Rleg_6666"
/note="Selenocysteine synthase [seryl-tRNASer selenium
transferase] [Amino acid transport and metabolism];
Region: SelA; COG1921"
/db_xref="CDD:32104"
misc_feature complement(96612..97619)
/locus_tag="Rleg_6666"
/note="L-seryl-tRNA selenium transferase; Region: SelA;
pfam03841"
/db_xref="CDD:112645"
misc_feature complement(order(97020..97022,97029..97031,97092..97094,
97182..97184,97428..97430,97437..97442))
/locus_tag="Rleg_6666"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99742"
misc_feature complement(97020..97022)
/locus_tag="Rleg_6666"
/note="catalytic residue [active]"
/db_xref="CDD:99742"
gene complement(97727..98224)
/locus_tag="Rleg_6667"
/db_xref="GeneID:8022577"
CDS complement(97727..98224)
/locus_tag="Rleg_6667"
/inference="protein motif:PFAM:PF01042"
/note="PFAM: Endoribonuclease L-PSP;
KEGG: rec:RHECIAT_PA0000273 putative translation
initiation inhibitor protein, YjgF family"
/codon_start=1
/transl_table=11
/product="Endoribonuclease L-PSP"
/protein_id="YP_002984668.1"
/db_xref="GI:241666584"
/db_xref="InterPro:IPR006175"
/db_xref="GeneID:8022577"
/translation="MNQFPTAAGKVENSPYERLAALGIALPPPPPPIANFVTHVIEGN
MLYLSGQGPREADGFMHAGKVGGGVSIDEAYGHARLTGINLLAVMQDALGDLARVKRV
VKLLGMVNAVPEFEDHPSVINGCSDLLIEVFGPAGEHARSAVGFGSLPGNITVEIEAI
VALHG"
misc_feature complement(97739..98122)
/locus_tag="Rleg_6667"
/note="This group of proteins belong to a large family of
YjgF/YER057c/UK114-like proteins present in bacteria,
archaea, and eukaryotes with no definitive function. The
conserved domain is similar in structure to chorismate
mutase but there is no sequence...; Region:
YjgF_YER057c_UK114_like_1; cd02199"
/db_xref="CDD:100006"
misc_feature complement(order(97745..97747,97751..97753,97757..97759,
97787..97813,97835..97837,97847..97849,97856..97858,
97901..97903,97907..97909,97913..97918,97922..97924,
98075..98080,98084..98086,98090..98092,98099..98101,
98105..98107,98114..98119))
/locus_tag="Rleg_6667"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100006"
misc_feature complement(order(97757..97759,97802..97804,97856..97858,
97868..97870,98117..98119))
/locus_tag="Rleg_6667"
/note="putative active site [active]"
/db_xref="CDD:100006"
gene complement(98290..99159)
/locus_tag="Rleg_6668"
/db_xref="GeneID:8022578"
CDS complement(98290..99159)
/locus_tag="Rleg_6668"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: rec:RHECIAT_PA0000272 probable peptide ABC
transporter, permease protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984669.1"
/db_xref="GI:241666585"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022578"
/translation="MADIAIKPVEGEGSKFTRRLLKRKTVACGLLILTIFVLLAVFAP
VVAPYSPSKLSIVNRLKPPSGMFFFGTDEFGRDVFSRTIFAGRLSLLVGVAVVTLSAV
IGVTLGLLAGFFQKLDTPIARLIDAMMAFPDILLAIALVAALGPSLTTVIIALSIVYA
PRLARIVRASTLVIRELPYVEAARALGISTFHIMTRHVLRNLLSPILVQATFLFASAM
LAEAGLSFLGLGVSPEIPTWGTMIAAGRQYIGQADWMTLFPGVAIILSVLSLQMVGDG
LRDMLDPRLRKDL"
misc_feature complement(98299..99120)
/locus_tag="Rleg_6668"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppC; COG1173"
/db_xref="CDD:31366"
misc_feature complement(98359..98901)
/locus_tag="Rleg_6668"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(98359..98364,98371..98376,98383..98388,
98392..98397,98404..98409,98437..98442,98482..98487,
98494..98505,98524..98526,98533..98538,98578..98580,
98629..98631,98638..98643,98653..98655,98659..98664,
98671..98673,98677..98679,98683..98688,98737..98739,
98743..98748,98755..98784,98788..98799,98824..98826,
98839..98844,98851..98856))
/locus_tag="Rleg_6668"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(98488..98505,98737..98781))
/locus_tag="Rleg_6668"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(98407..98409,98437..98439,98446..98448,
98485..98487,98701..98703,98737..98739))
/locus_tag="Rleg_6668"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(98557..98559,98569..98574,98590..98628))
/locus_tag="Rleg_6668"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(99159..100100)
/locus_tag="Rleg_6669"
/db_xref="GeneID:8022579"
CDS complement(99159..100100)
/locus_tag="Rleg_6669"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: ret:RHE_PE00341 peptide ABC transporter, permease
protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984670.1"
/db_xref="GI:241666586"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022579"
/translation="MIRYILQRLFGMIVVMFLVVTIVFVIVRVTPGDPAAVMLGPDAT
PQDIADLRARLGLDQSLGLQYVYYIGQMLRGDLGQSIFLNMPVTSALLDRAEPTFFLT
LFSLAIASIIALPIGIYAAYRRGSFIDQAATTLAMFAASIPSFWLGLILMQFFAVRLN
LFPVSGYGGPGSTFFERMYHLTLPAFALGIVSSALILRFTRASMLDVLGDDYIRTARA
KGLIERRVILKHALKNALIPILTVIGLTAAVLISGAVVTETVFGLPGVGNLVVSAVLR
RDYPVIQGALLVIAALYVLINFAIDMLYLLIDPRVRY"
misc_feature complement(99162..100100)
/locus_tag="Rleg_6669"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppB; COG0601"
/db_xref="CDD:30946"
misc_feature complement(99315..99809)
/locus_tag="Rleg_6669"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(99324..99329,99336..99347,99366..99368,
99375..99380,99420..99422,99471..99473,99480..99485,
99495..99497,99501..99506,99513..99515,99519..99521,
99525..99530,99645..99647,99651..99656,99663..99692,
99696..99707,99738..99740,99753..99758,99765..99770))
/locus_tag="Rleg_6669"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(99330..99347,99645..99689))
/locus_tag="Rleg_6669"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(99327..99329,99543..99545,99645..99647))
/locus_tag="Rleg_6669"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(99399..99401,99411..99416,99432..99470))
/locus_tag="Rleg_6669"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(100181..101707)
/locus_tag="Rleg_6670"
/db_xref="GeneID:8022580"
CDS complement(100181..101707)
/locus_tag="Rleg_6670"
/inference="protein motif:PFAM:PF00496"
/note="PFAM: extracellular solute-binding protein family
5;
KEGG: rec:RHECIAT_PA0000270 probable peptide ABC
transporter, substrate-binding protein"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 5"
/protein_id="YP_002984671.1"
/db_xref="GI:241666587"
/db_xref="InterPro:IPR000914"
/db_xref="GeneID:8022580"
/translation="MKTLVAFLLGTALVALPSTLLAQEKGGVINVATIGEPPTLDPMS
STADLVGIVTQHIFETLYTFDKSWNVTPLLAESLPEISADGKTYTIKLRTGIKFHDNT
DMTSEDVVASLGRWMKIASRGKQVAGFIDKVTAVDPSTVTITLKQPYAPLTSLLAFNN
SAAIIIPSEKQDEPMKDFIGTGPYMLKERKADQYIQLVRFDGYKSREGDSDGYGGARH
QYLDEIRFVPVPDPNTRVEAAVSGQYDYVDSIPVESYDKLKASTASQPIILKPFGYPV
FVFNTKEGIAGNVEVRKAIRQALSMEDMLAAAFGSTDFYALDGAIYPKTFAWSTDAGV
EGAYNVADPEGAAAAAKKAGYNGEPIRILTSRQYEFHYKMAQVAAEYLKLAGFTVDMQ
VVDWATLTQRRTDPKLWDIYITHSPFLPEPALIGSLSTSSPGWWDTPARKAAVDAFTS
EVDPKKRVALWADVQKAIYADAPFMKIGDFNAVSAESTKLEGVDPAPWPYFWNASIKK
"
sig_peptide complement(101639..101707)
/locus_tag="Rleg_6670"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.999 at
residue 23"
misc_feature complement(100229..101626)
/locus_tag="Rleg_6670"
/note="The substrate-binding component of an
uncharacterized ABC-type
nickel/dipeptide/oligopeptide-like import system contains
the type 2 periplasmic binding fold; Region:
PBP2_NikA_DppA_OppA_like_16; cd08502"
/db_xref="CDD:173867"
misc_feature complement(100403..101503)
/locus_tag="Rleg_6670"
/note="Bacterial extracellular solute-binding proteins,
family 5 Middle; Region: SBP_bac_5; pfam00496"
/db_xref="CDD:201265"
gene 101930..102514
/locus_tag="Rleg_6671"
/db_xref="GeneID:8022581"
CDS 101930..102514
/locus_tag="Rleg_6671"
/inference="protein motif:PFAM:PF07081"
/note="PFAM: protein of unknown function DUF1349;
KEGG: rec:RHECIAT_PA0000269 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984672.1"
/db_xref="GI:241666588"
/db_xref="InterPro:IPR009784"
/db_xref="GeneID:8022581"
/translation="MSIDFNDGKWLNEPANWQADEAGLTLTTDEKTDFWRETHYGFTR
DSGHFLAFPISDGFTAQIRVQGEFRTLYDQAGLMVRIDERRWVKTGVEFTDGEAFLST
VVTDGKSDWSVAQPFRELEDFCIRVTVANGAMRIQASRDGSFWPLLRLAPFPAAAHYE
VGPTACTPERSGLTVRFSEFSIGPAITKDLHDLS"
misc_feature 101954..102499
/locus_tag="Rleg_6671"
/note="Protein of unknown function (DUF1349); Region:
DUF1349; pfam07081"
/db_xref="CDD:203575"
gene 102738..103871
/locus_tag="Rleg_6672"
/db_xref="GeneID:8022582"
CDS 102738..103871
/locus_tag="Rleg_6672"
/inference="similar to AA sequence:KEGG:Avi_5639"
/note="KEGG: ABC transporter substrate-binding protein ;
K01999 branched-chain amino acid transport system
substrate-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="YP_002984673.1"
/db_xref="GI:241666589"
/db_xref="GeneID:8022582"
/translation="MNDALKIGILYSTTGPYGSMGRDARDGADFAMAEYGGVEGLAIE
PVFFDPHADLAAYLDGARHLLRAGCRHIVGTITSAARKEVIPLVEKHDGLLWYMCPYE
GFEANENVIYVGGCPNQHLLPLFEHLIPRYGARPYLVGANYVWGWEMNRLARELITNA
GGEVLGERYLPLEETAVERIVAEIAQRRPSFILNNLIGPSSYAFLEAIKALGDRDPAF
RAENCPVVSCDLMECELDDIAAGAAAGQLCAASYFDSIATPENAAFKARVTEHHGAER
RVSSVFASAYTAVRLCVDAIVAAGGDEPDAVRRELYNRSWPTLFGALSIDRETNHAAL
PFHLGRINADNGFDVVASRPPLAADPYLTGRNRQAFPRLRVVS"
misc_feature 102750..103769
/locus_tag="Rleg_6672"
/note="Periplasmic binding protein; Region: Peripla_BP_6;
pfam13458"
/db_xref="CDD:205636"
misc_feature 102753..103826
/locus_tag="Rleg_6672"
/note="Periplasmic binding domain of amidase (AmiC) that
belongs to the type I periplasmic binding fold protein
family; Region: PBP1_AmiC; cd06357"
/db_xref="CDD:107352"
misc_feature order(102963..102971,103026..103028,103035..103040,
103164..103166,103170..103172,103422..103424)
/locus_tag="Rleg_6672"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107352"
misc_feature order(102972..102974,102981..102983,102990..102992,
103002..103004,103047..103049,103053..103055,
103167..103169,103179..103181,103719..103721,
103812..103814,103818..103823)
/locus_tag="Rleg_6672"
/note="regulator interaction site; other site"
/db_xref="CDD:107352"
gene 103868..104449
/locus_tag="Rleg_6673"
/db_xref="GeneID:8022583"
CDS 103868..104449
/locus_tag="Rleg_6673"
/inference="protein motif:PFAM:PF03861"
/note="PFAM: ANTAR domain protein;
KEGG: response regulator antiterminator domain-containing
protein"
/codon_start=1
/transl_table=11
/product="ANTAR domain protein with unknown sensor"
/protein_id="YP_002984674.1"
/db_xref="GI:241666590"
/db_xref="InterPro:IPR005561"
/db_xref="GeneID:8022583"
/translation="MRETPNFTGWQAMVLHREDGNTERLIRQLRLLGIHAALQWAPLS
TAALPDLVIVDADQGWDDLLPWNGETPACPVVALLGSEAPGRIAWALGQGAGAIIAKP
IATSAVYPALVMAVSIHQERKATAEKLKYLEERVRLRPLVHAAVEKLQAAHGIDEESA
YAILRNCAMRRRLPMEQISAFILAGAEPLPEAG"
misc_feature 103868..104434
/locus_tag="Rleg_6673"
/note="Response regulator with putative antiterminator
output domain [Signal transduction mechanisms]; Region:
AmiR; COG3707"
/db_xref="CDD:33502"
misc_feature 104249..104416
/locus_tag="Rleg_6673"
/note="ANTAR domain; Region: ANTAR; pfam03861"
/db_xref="CDD:202788"
gene 104449..105297
/locus_tag="Rleg_6674"
/db_xref="GeneID:8022584"
CDS 104449..105297
/locus_tag="Rleg_6674"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: rsp:RSP_3258 ABC peptide transporter, inner membrane
subunit"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984675.1"
/db_xref="GI:241666591"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022584"
/translation="MHVLKQMIRQPTALFGLVIVTLVIALAIAAPWIAPFSPDEQMFD
GLSLEGAPLPPGRPYLLGTDTLGRDLFSRLLFGARTSLIIGLVANGIAVAIGLFVGIV
AGYLRGLPGNILMRFTDLMMAFPALLLAIVLAALLKPSLWIVAMVIALVNWVQVARIV
YTETRGLVERDFIMAERSLGAGHMRVLFMHILPHLVPTAIVWGTLGIATTVLLEATLS
FLGVGVQPPQPSWGNIIFESQSYFQAAPWLVFIPGAIILLTALSFNLVGDALRDILDP
TQRGRG"
sig_peptide 104449..104538
/locus_tag="Rleg_6674"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.991) with cleavage site probability 0.939 at
residue 30"
misc_feature <104608..105291
/locus_tag="Rleg_6674"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppC; COG1173"
/db_xref="CDD:31366"
misc_feature 104680..105222
/locus_tag="Rleg_6674"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(104728..104733,104740..104745,104758..104760,
104788..104799,104803..104832,104839..104844,
104848..104850,104899..104904,104908..104910,
104914..104916,104923..104928,104932..104934,
104944..104949,104956..104958,105007..105009,
105049..105054,105061..105063,105082..105093,
105100..105105,105151..105156,105184..105189,
105196..105201,105205..105210,105217..105222)
/locus_tag="Rleg_6674"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(104806..104850,105082..105099)
/locus_tag="Rleg_6674"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(104848..104850,104884..104886,105100..105102,
105145..105147,105154..105156,105184..105186)
/locus_tag="Rleg_6674"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(104959..104997,105013..105018,105028..105030)
/locus_tag="Rleg_6674"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 105297..106217
/locus_tag="Rleg_6675"
/db_xref="GeneID:8022585"
CDS 105297..106217
/locus_tag="Rleg_6675"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: binding-protein-dependent transport systems inner
membrane component ; K02033 peptide/nickel transport
system permease protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984676.1"
/db_xref="GI:241666592"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022585"
/translation="MGFVMLRRLLQAALILLGVAAITFVLLYALPADPARMIAGRSAT
AQTVANIRHELGLDQPLLVQFGTYLGNLLHGNLGRSYAQKTDVWTLIAARLPATLTLM
LAGIFVEVVLGLTLGTIAAVRRGGFIDRLVMMASFVGTSAPQFLVALLLLYLLAATLG
WFPMSGYGSFSHLVLPAVTLGICGAGWYARMVRSSMIDVLNQDYVRTARAKGLSSRRV
ILRHALPNAVLPIIAMIGIDIGQFMGGVVVVEAVYGWPGIGQLAWQAIQQVDIPIIMG
VTLTSALAIIIGNLLADLVAPVIDPRIRTR"
sig_peptide 105297..105386
/locus_tag="Rleg_6675"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.968) with cleavage site probability 0.898 at
residue 30"
misc_feature 105363..106214
/locus_tag="Rleg_6675"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppB; COG0601"
/db_xref="CDD:30946"
misc_feature 105579..106157
/locus_tag="Rleg_6675"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(105627..105632,105639..105644,105657..105659,
105690..105701,105705..105734,105741..105746,
105750..105752,105843..105848,105852..105854,
105858..105860,105867..105872,105876..105878,
105888..105893,105900..105902,105951..105953,
105993..105998,106005..106007,106026..106037,
106044..106049,106074..106079,106107..106112,
106119..106124,106128..106133,106140..106145,
106152..106157)
/locus_tag="Rleg_6675"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(105708..105752,106026..106043)
/locus_tag="Rleg_6675"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(105750..105752,105828..105830,106044..106046,
106068..106070,106077..106079,106107..106109)
/locus_tag="Rleg_6675"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(105903..105941,105957..105962,105972..105974)
/locus_tag="Rleg_6675"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 106243..107862
/locus_tag="Rleg_6676"
/db_xref="GeneID:8022586"
CDS 106243..107862
/locus_tag="Rleg_6676"
/inference="protein motif:PFAM:PF00496"
/note="PFAM: extracellular solute-binding protein family
5;
KEGG: csa:Csal_0212 extracellular solute-binding protein,
family 5"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 5"
/protein_id="YP_002984677.1"
/db_xref="GI:241666593"
/db_xref="InterPro:IPR000914"
/db_xref="GeneID:8022586"
/translation="MFKRWLQQTTMATMVALAPLSVMADETPKQGGDIVVTYKDDITT
LDPAIGYDWVNWSMIKSLYSRLMDYTPGTPNPVPSLAESFTVSPDGLTYTFKLHKGVK
FSNGREVVASDVKYSIERAVDPKTQGPGAGFFGAIKGFEDETGGKTTTLSGIDTPDDS
TVIFNLSRPDATFLHVLAINFASVVPKEAVEAAAGDFGKKPVGSGTFILKDWTIGQQL
VFERNKDYFVKGVPYIDSFKVEVGQEPLVALLRLQKGEVDIAGDGIPPAKFLEIKNSA
DGAQMIVDGEQLHTGYITLNTKVKPFDNVKVRQALNMAINKDRITRILNGRATPANQP
LPPLMPGYDKAFTGYTYDVAKAKALLAEAGYPDGFETVLYSTNTDPQPRIAQAIQQDL
AAVGVKAEVRALAQANVISAGGTEGEAPMIWSGGMAWIADFPDPSNFYGPILGCAGAV
PGGWNWSWYCNADLDKRAVAADSMSDPAKATERTAAWGKIFTDIMADAPWIPVINERR
VVAKSLRMGGADNIYIDPTRVINYDAIYVKQ"
sig_peptide 106243..106317
/locus_tag="Rleg_6676"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 25"
misc_feature 106342..107796
/locus_tag="Rleg_6676"
/note="The substrate-binding domain of an ABC-type
nickel/oligopeptide-like import system contains the type 2
periplasmic binding fold; Region:
PBP2_NikA_DppA_OppA_like; cd00995"
/db_xref="CDD:173853"
misc_feature 106465..107589
/locus_tag="Rleg_6676"
/note="Bacterial extracellular solute-binding proteins,
family 5 Middle; Region: SBP_bac_5; pfam00496"
/db_xref="CDD:201265"
gene 108055..108999
/locus_tag="Rleg_6677"
/db_xref="GeneID:8022587"
CDS 108055..108999
/locus_tag="Rleg_6677"
/inference="protein motif:PFAM:PF03069"
/note="PFAM: Acetamidase/Formamidase;
KEGG: formamidase"
/codon_start=1
/transl_table=11
/product="Acetamidase/Formamidase"
/protein_id="YP_002984678.1"
/db_xref="GI:241666594"
/db_xref="InterPro:IPR004304"
/db_xref="GeneID:8022587"
/translation="MCIACTHTIHRAQHNFGWNKDFVPAVVAKPGETIHFECMDSSGG
QLGSNATLETLNTLDFGKINPVSGPVYIEGAKPGDALKVTLRKFIPSGVGWTANIPGF
GLLADQFTDPALHVWSYDANSMVPALYGPGGRVPLKPFAGTIGVAPAEPGTHSVVPPR
RVGGNMDIRDLTAGVTLYLPVEVDGALFSIGDTHAAQGDGEVCGTAIESQMNVEATIE
LVKDARLQTPRFTTTEPVTRHLDGAGYEVTTGIGPDLMTGARESVMRMIDLLGAEHGM
SAVDAYLLCSVCGDLRISEIVDQPNWVVSFYFPRIVFA"
misc_feature 108076..108993
/locus_tag="Rleg_6677"
/note="Predicted acetamidase/formamidase [Energy
production and conversion]; Region: COG2421"
/db_xref="CDD:32551"
gene 108996..110684
/locus_tag="Rleg_6678"
/db_xref="GeneID:8022588"
CDS 108996..110684
/locus_tag="Rleg_6678"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter; Oligopeptide/dipeptide ABC
transporter domain protein;
SMART: AAA ATPase;
KEGG: smd:Smed_1749 ABC transporter"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984679.1"
/db_xref="GI:241666595"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013563"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022588"
/translation="MNEAMPAAAPVLSLRKLSVDARTPEGRKPVLQDVSFELAGGETL
CIAGESGSGKSVTSLSIMGLLPKASLRVASGSVLLGERDLLKLSDRGMRSVRGGDIAM
VFQEPMTSLNPVMSVGNQLTEAIRAHQGSENAEAVALKMLDAVQITDPARRLKQYPHE
LSGGMRQRVMIAMALSCRPKVLIADEPTTALDVTVQAQILRLMRELKREFGASIILIT
HDMGVVAEMADRVVIMQNGRIVEQGTTLAIFQRPKEAYTQQLLAAVPRLGAFAGTDRP
PRITQRAVETLHPDRTPVLNVRDLTVTYGNAASRFFKGKPPVAAVDDVSFDILPGETL
GLVGESGSGKSTTGKAVLGLIPFKGNVLIDGRNIAGLSQREMRPVRRSAQMIFQDPYA
SLDPRMAVGKAIGEPMVIHGIGNHSERQDRVAELLRRVGLTPDAATRYPHEFSGGQRQ
RICIARALALEPKLIVADESVAALDVSVRARVLDLLLELQETMGLAYLFISHDMAVVE
RMSHNVAVMRAGRIIETGTRRDIFENPRDDYTRALIAAVPIPDPEVYRGKEAHA"
misc_feature 109017..110651
/locus_tag="Rleg_6678"
/note="ATPase components of various ABC-type transport
systems, contain duplicated ATPase [General function
prediction only]; Region: COG1123"
/db_xref="CDD:31320"
misc_feature 109026..109724
/locus_tag="Rleg_6678"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature 109137..109160
/locus_tag="Rleg_6678"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature order(109146..109151,109155..109163,109308..109310,
109548..109553,109650..109652)
/locus_tag="Rleg_6678"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature 109299..109310
/locus_tag="Rleg_6678"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature 109476..109505
/locus_tag="Rleg_6678"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature 109536..109553
/locus_tag="Rleg_6678"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature 109560..109571
/locus_tag="Rleg_6678"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature 109638..109658
/locus_tag="Rleg_6678"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature 109713..>109826
/locus_tag="Rleg_6678"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:212282"
misc_feature 109875..110573
/locus_tag="Rleg_6678"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature 110007..110030
/locus_tag="Rleg_6678"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature order(110016..110021,110025..110033,110157..110159,
110397..110402,110499..110501)
/locus_tag="Rleg_6678"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature 110148..110159
/locus_tag="Rleg_6678"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature 110325..110354
/locus_tag="Rleg_6678"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature 110385..110402
/locus_tag="Rleg_6678"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature 110409..110420
/locus_tag="Rleg_6678"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature 110487..110507
/locus_tag="Rleg_6678"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature 110562..>110654
/locus_tag="Rleg_6678"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:212282"
misc_binding 110835..110910
/note="TPP riboswitch (THI element) as predicted by
Rfam(RF 00059), score 57.23"
/bound_moiety="thiamin/thiaminpyrophosphate"
gene 110975..111778
/locus_tag="Rleg_6679"
/db_xref="GeneID:8022589"
CDS 110975..111778
/locus_tag="Rleg_6679"
/EC_number="2.7.1.50"
/inference="protein motif:TFAM:TIGR00694"
/note="KEGG: ret:RHE_PE00337 hydoxyethylthiazole kinase
protein;
TIGRFAM: hydroxyethylthiazole kinase;
PFAM: hydroxyethylthiazole kinase"
/codon_start=1
/transl_table=11
/product="hydroxyethylthiazole kinase"
/protein_id="YP_002984680.1"
/db_xref="GI:241666596"
/db_xref="InterPro:IPR000417"
/db_xref="GeneID:8022589"
/translation="MQTKTTPGAMLKAMREKPPLVQCITNYVAMNIAANVLLASGASP
AMVHAAEEAGEFAGIASALTINIGTLSTQWIDGMQAAAKAATSAGKPWVLDPVAHYAT
AFRRNAVADLLALRPTIIRGNASEIIALAGGESRGQGVDSRDPVEQAEGSARWLAERQ
RAVVAVTGAVDFVTDGERAVRIEGGSALMPQVTALGCSLTCLVGAFAATAPEDIFGAT
VAALATFAIAGEEAALGAAGPGSFSWRFLDALAALDAETLDARARISAA"
sig_peptide 110975..111124
/locus_tag="Rleg_6679"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.855) with cleavage site probability 0.848 at
residue 50"
misc_feature 111005..111616
/locus_tag="Rleg_6679"
/note="4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase
catalyzes the phosphorylation of the hydroxylgroup of Thz.
A reaction that allows cells to recycle Thz into the
thiamine biosynthesis pathway, as an alternative to its
synthesis from cysteine, tyrosine...; Region: THZ_kinase;
cd01170"
/db_xref="CDD:29354"
misc_feature order(111050..111052,111056..111058,111074..111076,
111086..111088,111104..111106,111110..111112,
111170..111172,111176..111181)
/locus_tag="Rleg_6679"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29354"
misc_feature order(111053..111070,111074..111079,111086..111088,
111110..111121,111125..111130,111137..111142,
111176..111187,111284..111289,111542..111553)
/locus_tag="Rleg_6679"
/note="multimerization interface [polypeptide binding];
other site"
/db_xref="CDD:29354"
misc_feature order(111257..111259,111335..111337,111341..111343,
111350..111352,111473..111475,111479..111481,
111485..111487,111539..111541,111557..111559,
111563..111565)
/locus_tag="Rleg_6679"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29354"
gene 111775..112410
/locus_tag="Rleg_6680"
/db_xref="GeneID:8022590"
CDS 111775..112410
/locus_tag="Rleg_6680"
/EC_number="2.5.1.3"
/inference="protein motif:TFAM:TIGR00693"
/note="KEGG: ret:RHE_PE00336 thiamine-phosphate
pyrophosphorylase protein;
TIGRFAM: thiamine-phosphate pyrophosphorylase;
PFAM: thiamine monophosphate synthase"
/codon_start=1
/transl_table=11
/product="thiamine-phosphate pyrophosphorylase"
/protein_id="YP_002984681.1"
/db_xref="GI:241666597"
/db_xref="InterPro:IPR003733"
/db_xref="GeneID:8022590"
/translation="MKAFDLSLYLVLDPDLCAGIGMVETARLAIAGGATMVQLRDKHA
GTIGMIETGRALKQALDGTGALLIVNDDVEAAIAIGADGLHIGQEDMDAMRARTMIGP
DMILGLSVESEALANAVDPDLVDYTGVGPVFATPTKADHKQPIGFDGLARLVKASPVP
SVAIGGLKADHVAQVFAAGASGLAVVSAICGTPDPEAATRRIAAEIRKARA"
misc_feature 111796..112359
/locus_tag="Rleg_6680"
/note="Thiamine monophosphate synthase (TMP
synthase)/TenI. TMP synthase catalyzes an important step
in the thiamine biosynthesis pathway, the substitution of
the pyrophosphate of 2-methyl-4-amino-5-
hydroxymethylpyrimidine pyrophosphate by 4-methyl-5-;
Region: TMP_TenI; cd00564"
/db_xref="CDD:73367"
misc_feature order(111799..111801,111805..111807,111886..111888,
111892..111894,112027..112029,112099..112101,
112150..112152,112156..112158,112177..112179,
112183..112185,112258..112260,112270..112272,
112324..112335)
/locus_tag="Rleg_6680"
/note="thiamine phosphate binding site [chemical binding];
other site"
/db_xref="CDD:73367"
misc_feature order(111886..111888,111892..111894,111898..111900,
111982..111987,112042..112044,112099..112101,
112177..112179,112183..112188,112270..112272,
112330..112335)
/locus_tag="Rleg_6680"
/note="active site"
/db_xref="CDD:73367"
misc_feature order(111892..111894,111898..111900,111982..111987,
112033..112035,112042..112044,112099..112101,
112186..112188)
/locus_tag="Rleg_6680"
/note="pyrophosphate binding site [ion binding]; other
site"
/db_xref="CDD:73367"
gene 112407..113216
/locus_tag="Rleg_6681"
/db_xref="GeneID:8022591"
CDS 112407..113216
/locus_tag="Rleg_6681"
/inference="protein motif:TFAM:TIGR00097"
/note="TIGRFAM: phosphomethylpyrimidine kinase;
PFAM: Phosphomethylpyrimidine kinase type-1;
KEGG: rec:RHECIAT_PA0000265 phosphomethylpyrimidine kinase
protein"
/codon_start=1
/transl_table=11
/product="phosphomethylpyrimidine kinase"
/protein_id="YP_002984682.1"
/db_xref="GI:241666598"
/db_xref="InterPro:IPR004399"
/db_xref="InterPro:IPR013749"
/db_xref="GeneID:8022591"
/translation="MIRNVLSIAGSDPSGGAGIQADLKAFSARGVYGMAVLTALTAQN
TQGVSGVHLVPPQFVADQIKAVFADVRVDAVKIGMIANAGIAEAVAGALTDHRDIPIV
IDPVMIAKGGAALLAPEAVDVLTRRLLPLATLLTPNLPEAAALLHQPVATNRAEMAAQ
AERLRALGPAAVLVKGGHLDSDESPDVLATAAGLHWFEARRVPTKNTHGTGCTLSSAL
AAELAKGASAREAVAIAKDYLAGAVAASGHLTVGSGHGPVQHFYALWKDGE"
misc_feature 112416..113144
/locus_tag="Rleg_6681"
/note="4-amino-5-hydroxymethyl-2-methyl-pyrimidine
phosphate kinase (HMPP-kinase) catalyzes two consecutive
phosphorylation steps in the thiamine phosphate
biosynthesis pathway, leading to the synthesis of vitamin
B1. The first step is the phosphorylation of...; Region:
HMPP_kinase; cd01169"
/db_xref="CDD:29353"
misc_feature order(112416..112418,112437..112439,112443..112448,
112452..112454,112464..112466,112473..112478,
112485..112487,112494..112511,112515..112517,
112524..112538,112551..112556,112560..112562,
112566..112571,112578..112580,112587..112589,
112599..112604)
/locus_tag="Rleg_6681"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29353"
misc_feature order(112434..112436,112470..112472,112533..112535,
112641..112643,113040..113042)
/locus_tag="Rleg_6681"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29353"
misc_feature order(112716..112718,112827..112829,112929..112931,
113031..113033,113037..113039)
/locus_tag="Rleg_6681"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29353"
gene 113437..113916
/locus_tag="Rleg_6682"
/db_xref="GeneID:8022592"
CDS 113437..113916
/locus_tag="Rleg_6682"
/inference="protein motif:PFAM:PF00583"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: rec:RHECIAT_PA0000264 hypothetical protein"
/codon_start=1
/transl_table=11
/product="GCN5-related N-acetyltransferase"
/protein_id="YP_002984683.1"
/db_xref="GI:241666599"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:8022592"
/translation="MPDLLVSLYSTELADLKRKAGDVGVSIRPALPPELHLIVSWVRE
RFSENWASEVAAAFSRQPVACLISVENGKLLGFACYDTTARGFFGPTGVDPDARGQGI
GLALFSACLQTMKTLGHAYAFIGDAGPVDFYARNAGATIIPAPDKGIYEGMLRSTPK"
misc_feature 113512..113871
/locus_tag="Rleg_6682"
/note="Predicted acetyltransferase [General function
prediction only]; Region: COG3153"
/db_xref="CDD:32967"
misc_feature 113629..113808
/locus_tag="Rleg_6682"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(113707..113715,113743..113748)
/locus_tag="Rleg_6682"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 113941..114963
/locus_tag="Rleg_6683"
/db_xref="GeneID:8022593"
CDS 113941..114963
/locus_tag="Rleg_6683"
/EC_number="3.2.1.52"
/inference="protein motif:PRIAM:3.2.1.52"
/note="PFAM: glycoside hydrolase family 3 domain protein;
KEGG: rec:RHECIAT_PA0000263 putative
beta-N-acetylhexosaminidase protein"
/codon_start=1
/transl_table=11
/product="beta-N-acetylhexosaminidase"
/protein_id="YP_002984684.1"
/db_xref="GI:241666600"
/db_xref="InterPro:IPR001764"
/db_xref="GeneID:8022593"
/translation="MSSTPLALFVGLPNPTISDDEFALFRETNPLGLFVGRRNQREPE
QTRRLIDRFREAVGRDDAPVFTDQEGGRVQHLDAGPWPLFRSFGQFAELARRDFDLGK
KALRLSSQAMGAMMTELGLSSGCSPVLDLVFETTSAVIGARSFGPGPDFVAALGREVV
DGLLETGNMPVIKHIPGHGRATLDSHKERPVVDASRETLTATDFKPFVALKDTPWAMV
AHVVYSAYDAELPASVSRVMHDVIRNDMGYEGVLISDCIFMQSLSGTLPERVKQVLDA
GYDIALHSHGDIPESEAAAKAARPLTEAALQRIAAGKARLGNLKIDVRAAHAEVEDMF
ASALVS"
misc_feature 113941..114936
/locus_tag="Rleg_6683"
/note="Beta-glucosidase-related glycosidases [Carbohydrate
transport and metabolism]; Region: BglX; COG1472"
/db_xref="CDD:31661"
misc_feature 114037..114786
/locus_tag="Rleg_6683"
/note="Glycosyl hydrolase family 3 N terminal domain;
Region: Glyco_hydro_3; cl07971"
/db_xref="CDD:208801"
gene 115007..116653
/locus_tag="Rleg_6684"
/db_xref="GeneID:8022594"
CDS 115007..116653
/locus_tag="Rleg_6684"
/inference="protein motif:PFAM:PF00496"
/note="PFAM: extracellular solute-binding protein family
5;
KEGG: rec:RHECIAT_PA0000262 putative ABC transporter,
substrate-binding protein"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 5"
/protein_id="YP_002984685.1"
/db_xref="GI:241666601"
/db_xref="InterPro:IPR000914"
/db_xref="GeneID:8022594"
/translation="MKKYLLAAAALTLLSGSAMAQTILTVNIEPATTWVRNFNPFNQT
SSRQSTLDFIYEPLVVFNRFDSNKPVYRLAESFKLSDDLKSIDFKLRPNLKWSDGKPL
TAADVKFTYDYLKKFPALDFVSIWTFITDVQAVDGQTVRFTLANPSSLAAEQISQLPI
VPEHVWKDVADPVTFANETPVGSGPLTEVPRFTGQTYDQCRNPNYWDNEHLKVDCMRF
PQLADNNQMLTATADGTLDWGVSFIPDIDNVYVSKDPAHFHYWYSPSSMVAFLFNLET
ANENNKKAFNDLKFRRAVSMALDRKTMIDVAGYGYPTLNEDPGLMGELYKSWADPSVK
ADFGKFATYDADAAKALLDEAGYNDKDGDGFRDNPDGTKISFSIIVPSAWTDWIDTVN
LAVEGMQAVGIDAKIETPEEAVWTGNLINGTFDAAINSLPASASPYYPYKRAFSASDK
GKTRFTAQRWFNPEVEKLVTEFTHTADLAKQKDAMNKAQRIVAENMPVIPVFNNPNWY
QYNTKRFTGWSTKENPFVNPSISRTNPARLLNLLALEPVK"
sig_peptide 115007..115069
/locus_tag="Rleg_6684"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 21"
misc_feature 115076..116581
/locus_tag="Rleg_6684"
/note="The substrate binding domain of a cellulose-binding
protein from Thermotoga maritima contains the type 2
periplasmic binding fold; Region:
PBP2_TmCBP_oligosaccharides_like; cd08509"
/db_xref="CDD:173874"
misc_feature order(115088..115090,115724..115726,116525..116527)
/locus_tag="Rleg_6684"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173874"
misc_feature 115208..116362
/locus_tag="Rleg_6684"
/note="Bacterial extracellular solute-binding proteins,
family 5 Middle; Region: SBP_bac_5; pfam00496"
/db_xref="CDD:201265"
gene 116710..117687
/locus_tag="Rleg_6685"
/db_xref="GeneID:8022595"
CDS 116710..117687
/locus_tag="Rleg_6685"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: ret:RHE_PE00331 putative peptide ABC transporter,
permease protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984686.1"
/db_xref="GI:241666602"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022595"
/translation="MAFLLRRLVFYMAAFIAAATINFFLPRLMPGDPVQIMFSSAGTE
LPPESLQALKLTFGFVDGPLWQQYLTYLGSIFTGDLGRSIKYFPLPVTSVLGHALVWT
VGLMGTATIVSFALGTFLGIVAAWRRGSQFDVVVSVGAIFATSVPAVVTSLIVLFIFG
FTLGWFPNGYAADPSLDPAFSLQYIGSLAYHGILPMVTLCTVLIGGFTVTMRNNMINL
LGEDYIVMARAKGLSDRHVMLWYAARNALLPTVSSLAIAIGTILGGSLVTEVVYNYPG
LGNILYQAILARDYPVIQGQLLIMTATMLIANFIVDVSYVLLDPRLKGA"
misc_feature 116710..117678
/locus_tag="Rleg_6685"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppB; COG0601"
/db_xref="CDD:30946"
misc_feature 117004..117648
/locus_tag="Rleg_6685"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(117052..117057,117064..117069,117082..117084,
117115..117126,117130..117159,117166..117171,
117175..117177,117313..117318,117322..117324,
117328..117330,117337..117342,117346..117348,
117358..117363,117370..117372,117421..117423,
117463..117468,117475..117477,117496..117507,
117514..117519,117544..117549,117598..117603,
117610..117615,117619..117624,117631..117636,
117643..117648)
/locus_tag="Rleg_6685"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(117133..117177,117496..117513)
/locus_tag="Rleg_6685"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(117175..117177,117298..117300,117514..117516,
117538..117540,117547..117549,117598..117600)
/locus_tag="Rleg_6685"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(117373..117411,117427..117432,117442..117444)
/locus_tag="Rleg_6685"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 117689..118567
/locus_tag="Rleg_6686"
/db_xref="GeneID:8022596"
CDS 117689..118567
/locus_tag="Rleg_6686"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: rec:RHECIAT_PA0000260 putative ABC transporter,
permease protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984687.1"
/db_xref="GI:241666603"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022596"
/translation="MKTLLRNRKALIGLVIIAFIVLVAIAAPLLTQYDPAARTGRPHQ
PPSLDHILGTTRIGQDVFARLIYGARTSLAVGFGAGLLITLVGTALGIISGYRGGKTD
EIISFFTNMVLVVPNLPLLLVLAAFIGQASPLVIALILGATSWAWGARVTRAETLSVK
QKDFVKSAEMMGEPQWRIMTFEIFPNVISIVGINFIGSVIFAIITEATLEFLGLGDPR
AISWGTMLYNAQKASALSVGAWWDILTPCFALAFLGIGMSLLNFAVDEIANPRLRTGN
HLKRWSLLVRTGEGRL"
sig_peptide 117689..117769
/locus_tag="Rleg_6686"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.971 at
residue 27"
misc_feature 117800..118507
/locus_tag="Rleg_6686"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppC; COG1173"
/db_xref="CDD:31366"
misc_feature 117893..118405
/locus_tag="Rleg_6686"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(117941..117946,117953..117958,117971..117973,
118001..118012,118016..118045,118052..118057,
118061..118063,118115..118120,118124..118126,
118130..118132,118139..118144,118148..118150,
118160..118165,118172..118174,118223..118225,
118265..118270,118277..118279,118298..118309,
118316..118321,118358..118363,118391..118396,
118403..118405)
/locus_tag="Rleg_6686"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(118019..118063,118298..118315)
/locus_tag="Rleg_6686"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(118061..118063,118100..118102,118316..118318,
118352..118354,118361..118363,118391..118393)
/locus_tag="Rleg_6686"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(118175..118213,118229..118234,118244..118246)
/locus_tag="Rleg_6686"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 118564..119367
/locus_tag="Rleg_6687"
/db_xref="GeneID:8022597"
CDS 118564..119367
/locus_tag="Rleg_6687"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: AAA ATPase;
KEGG: ret:RHE_PE00329 putative peptide ABC transporter,
ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984688.1"
/db_xref="GI:241666604"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022597"
/translation="MTQPLLSVRNLTIDYIGEEKDFRAVDDVSFDVAPGEVFGLAGES
GCGKSTIAFAISRLHKPPALIRKESRILLDGRDVLGLDRQALSAFRWREVAMVFQSAM
NSLNPVLRIETQFYDMLRTHKGMSRAAARERTAEMLTLVDIAPDRMRDYPHQFSGGMR
QRIVIAICMALDPKLVVMDEPTTALDVVVQREILQRINELRRSFGFSVLFITHDLGLM
VQFCDRIGIMLAGQLVEQNTAEAIYRTPRHDYTKKLWASFPSLHGGVLL"
misc_feature 118570..119346
/locus_tag="Rleg_6687"
/note="ABC-type dipeptide/oligopeptide/nickel transport
system, ATPase component [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppF; COG1124"
/db_xref="CDD:31321"
misc_feature 118576..119274
/locus_tag="Rleg_6687"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature 118687..118710
/locus_tag="Rleg_6687"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature order(118696..118701,118705..118713,118858..118860,
119098..119103,119200..119202)
/locus_tag="Rleg_6687"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature 118849..118860
/locus_tag="Rleg_6687"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature 119026..119055
/locus_tag="Rleg_6687"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature 119086..119103
/locus_tag="Rleg_6687"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature 119110..119121
/locus_tag="Rleg_6687"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature 119188..119208
/locus_tag="Rleg_6687"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature 119257..>119346
/locus_tag="Rleg_6687"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:212282"
gene 119364..120263
/locus_tag="Rleg_6688"
/db_xref="GeneID:8022598"
CDS 119364..120263
/locus_tag="Rleg_6688"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter; Oligopeptide/dipeptide ABC
transporter domain protein;
SMART: AAA ATPase;
KEGG: rec:RHECIAT_PA0000258 putative ABC transporter,
ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984689.1"
/db_xref="GI:241666605"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013563"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022598"
/translation="MTDAILALDQVTKTFGHGSAAVHAARAISFSLHAGRALALVGES
GSGKTTCARMAMREYLPTSGRILYKGRPVEAAKSAEIARYRRSVQMIFQDPFASLNPA
HTIAHHLRRPLKLHRPEIKGAEIDAAIRELLQRVRLDPDLVAPKYPHELSGGQRQRVN
IARALAVKPEVIVADEPTSMLDVSVRLGVLNLLNEMKQEMNLGLLYITHDIATARYVA
EDIAVMYAGQIVEWGSVAKVIDNPLHPYTRLLLSAVPDPDVRFDDPKARLRPDEVEDI
RRRSAVPQDDIVEFEQDHFMRMV"
misc_feature 119376..120062
/locus_tag="Rleg_6688"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature 119379..120137
/locus_tag="Rleg_6688"
/note="ABC-type dipeptide/oligopeptide/nickel transport
system, ATPase component [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppF; COG1124"
/db_xref="CDD:31321"
misc_feature 119487..119510
/locus_tag="Rleg_6688"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature order(119496..119501,119505..119513,119640..119642,
119886..119891,119988..119990)
/locus_tag="Rleg_6688"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature 119631..119642
/locus_tag="Rleg_6688"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature 119814..119843
/locus_tag="Rleg_6688"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature 119874..119891
/locus_tag="Rleg_6688"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature 119898..119909
/locus_tag="Rleg_6688"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature 119976..119996
/locus_tag="Rleg_6688"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature 120051..>120188
/locus_tag="Rleg_6688"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; pfam08352"
/db_xref="CDD:203916"
gene 120335..121015
/locus_tag="Rleg_6689"
/db_xref="GeneID:8022599"
CDS 120335..121015
/locus_tag="Rleg_6689"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000257"
/note="KEGG: rec:RHECIAT_PA0000257 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984690.1"
/db_xref="GI:241666606"
/db_xref="GeneID:8022599"
/translation="MLPWIQLDSATIPGENGELRLKQRGSEFSIMLGANELMNSRLSG
SEEALATLSWDRIKSHPKPRILIGGLGMGFTLRAALAVLPEAAGVIVAELVPAVIAWA
RGPMAEVFKGCLDDRRVGIHQGDVGEAIRAGKAAYDAILLDVDNGPDGLTRKSNDRLY
DFAGLRAASDALRPGGVLAVWSSGPDPDFTRRLKGSGFAVDAVNTRANGKRGGARHVI
WLAVKPVK"
misc_feature 120335..>120889
/locus_tag="Rleg_6689"
/note="Spermidine synthase [Amino acid transport and
metabolism]; Region: SpeE; COG0421"
/db_xref="CDD:30770"
gene complement(121019..121810)
/locus_tag="Rleg_6690"
/db_xref="GeneID:8022600"
CDS complement(121019..121810)
/locus_tag="Rleg_6690"
/inference="protein motif:PFAM:PF03328"
/note="PFAM: HpcH/HpaI aldolase;
KEGG: rec:RHECIAT_PA0000256 probable hydroxyacid aldolase
protein"
/codon_start=1
/transl_table=11
/product="HpcH/HpaI aldolase"
/protein_id="YP_002984691.1"
/db_xref="GI:241666607"
/db_xref="InterPro:IPR005000"
/db_xref="GeneID:8022600"
/translation="MSAAEIDGFADRIRHHRGGMISAWIGIPDATLANHLAQEAFDAI
VLDMQHGMWDMPSAANAVAQVRLAGKPALARIPVGDFASASRLLDAGASGIIAPMINS
AEDAQAFVKATKYPPLGERSWGPSLALNHTGLSADDYLKNANALTVAIAMIETRAALE
AIDDILGVAGIDGIFIGPSDLSIALSNGDQVAPNAAEIDSAMQHAVSRCRAHGKVACA
FAGDGERAGELLKFGFDLVIAGAETAQLRSGARRAINAARRIASA"
misc_feature complement(121073..121750)
/locus_tag="Rleg_6690"
/note="Pyruvate kinase (PK): Large allosteric enzyme that
regulates glycolysis through binding of the substrate,
phosphoenolpyruvate, and one or more allosteric effectors.
Like other allosteric enzymes, PK has a high substrate
affinity R state and a low...; Region: Pyruvate_Kinase;
cl09155"
/db_xref="CDD:208991"
gene complement(121910..122113)
/locus_tag="Rleg_6691"
/db_xref="GeneID:8022601"
CDS complement(121910..122113)
/locus_tag="Rleg_6691"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000255"
/note="KEGG: rec:RHECIAT_PA0000255 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984692.1"
/db_xref="GI:241666608"
/db_xref="GeneID:8022601"
/translation="MLRTVGYVVGLLLILLGLIWIAQGSGYFPYPASSFMINQSIWIL
WGGVMAAAGIAVTVIISRLRRRG"
gene complement(122235..123137)
/locus_tag="Rleg_6692"
/db_xref="GeneID:8022602"
CDS complement(122235..123137)
/locus_tag="Rleg_6692"
/inference="protein motif:TFAM:TIGR03418"
/note="TIGRFAM: choline sulfate-utilization transcription
factor;
PFAM: regulatory protein LysR; LysR substrate-binding;
KEGG: ret:RHE_PE00325 LysR family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002984693.1"
/db_xref="GI:241666609"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="InterPro:IPR017786"
/db_xref="GeneID:8022602"
/translation="MPDRRPELGWMRIFTEVARLGSFSAAAAGLGLTQPAVSYQIRRL
EEQFGVALLRRQHRGVELTAEGERLFQVAAKTVGDIDALARSFRTEAQRPVVRLRTDY
AFSALWLIPRMHGFRLLHPETDIQIVATQRLEPGFRDDADVVVVFGTKAEFGAIGSLL
LQEKVVPVCTRGFLDRNGPFDEPQQLAKAILIHLDSPMPSPWFDWRSYLAEFSVTRDL
HAGRGDVSFNTYSLVVQAALSEQGVAIGWMGLVDTLLSTHMLVEAGPPLEAWDRGYWL
IPPRSANVDSERLSTWLVDEVGRT"
misc_feature complement(122250..123122)
/locus_tag="Rleg_6692"
/note="putative choline sulfate-utilization transcription
factor; Region: chol_sulf_TF; TIGR03418"
/db_xref="CDD:188320"
misc_feature complement(122937..123116)
/locus_tag="Rleg_6692"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(122292..122855)
/locus_tag="Rleg_6692"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature complement(order(122421..122426,122430..122435,
122451..122459,122481..122489,122751..122771,
122775..122777,122787..122789,122796..122801,
122805..122810))
/locus_tag="Rleg_6692"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 123280..124788
/locus_tag="Rleg_6693"
/db_xref="GeneID:8022603"
CDS 123280..124788
/locus_tag="Rleg_6693"
/inference="protein motif:TFAM:TIGR03417"
/note="TIGRFAM: choline-sulfatase;
PFAM: sulfatase;
KEGG: ret:RHE_PE00324 choline sulfatase protein"
/codon_start=1
/transl_table=11
/product="choline-sulfatase"
/protein_id="YP_002984694.1"
/db_xref="GI:241666610"
/db_xref="InterPro:IPR000917"
/db_xref="InterPro:IPR017785"
/db_xref="GeneID:8022603"
/translation="MAHPNILILMVDQLNGTFFPDGPADFLHTPHLKSLAERSVRFTN
AYTASPLCAPARASFMSGQLPSRTRVYDNAAEFASDIPTYAHHLRAAGYQTALSGKMH
FVGPDQLHGFEERLTTDIYPADFGWTPDYGKPGERIDWWYHNLGSVTGAGIAEITNQM
EYDDEVAYHATRKLFDLSRGHDERPWCLTVSFTHPHDPYVARRKFWDLYEDCPALDPS
VAPIAFERQDPHSQRLMKACDHDAFDISDEQVRRARRGYFANISYVDEKIGDILGVLE
RSRMAENTIILFASDHGDMLGDRGLWFKMNFFEGSARVPLMIAAPGWKPRRIDQPVST
LDVTPTLAGLAGIDIASLKPWTEGEDLAALAEGTGSRSPVPMEYAAEGSEAPLVCIRD
GRYKISLCEKDPPMLFNLEADPQELDNLAADPAHAEILARLVEQAGRRWNLSDFDAAV
RESQARRWVVYAALRNGAYYPWDYQPLQKASERYMRNHMDLNVLEENQRFPR"
misc_feature 123280..124578
/locus_tag="Rleg_6693"
/note="Sulfatase; Region: Sulfatase; cl10460"
/db_xref="CDD:213119"
misc_feature 123289..124782
/locus_tag="Rleg_6693"
/note="choline-sulfatase; Region: chol_sulfatase;
TIGR03417"
/db_xref="CDD:188319"
misc_feature 124618..124779
/locus_tag="Rleg_6693"
/note="Choline sulfatase enzyme C terminal; Region:
Choline_sulf_C; pfam12411"
/db_xref="CDD:193016"
gene complement(124927..125787)
/locus_tag="Rleg_6694"
/db_xref="GeneID:8022604"
CDS complement(124927..125787)
/locus_tag="Rleg_6694"
/inference="protein motif:PFAM:PF01261"
/note="PFAM: xylose isomerase;
KEGG: ret:RHE_PE00323 hypothetical protein"
/codon_start=1
/transl_table=11
/product="xylose isomerase"
/protein_id="YP_002984695.1"
/db_xref="GI:241666611"
/db_xref="InterPro:IPR012307"
/db_xref="GeneID:8022604"
/translation="MQVLQNGRFAVSTWSLHRLLGAVYAYSPDPDKSAAPKEPYGPGA
AALIDVPAALAARGVNRLEVCSFHLPSLDAAYISEFRDAMATSNVLFQTLLVEDGDPS
HPETAERDVKWMAEWIDIAAALGAERMRVIAGKQKPTEENLTRAAHHLNWLAEKAEGS
GVRVVVENWFDLLPSAVEMNWLLDRLDGKVGLNGDLGNWAAPAKYQGLADIMGRAEIC
HAKADYGVAGLDAEDYRTCLEMCEKAGYAGPFTLIYDSPFFPDEWDGILLQRTFIEDF
LREAPARKTA"
misc_feature complement(<125185..125589)
/locus_tag="Rleg_6694"
/note="Xylose isomerase-like TIM barrel; Region:
AP_endonuc_2; pfam01261"
/db_xref="CDD:201692"
misc_feature complement(<125284..>125478)
/locus_tag="Rleg_6694"
/note="AP endonuclease family 2; These endonucleases play
a role in DNA repair. Cleave phosphodiester bonds at
apurinic or apyrimidinic sites; the alignment also
contains hexulose-6-phosphate isomerases, enzymes that
catalyze the epimerization of...; Region: AP2Ec; cl12060"
/db_xref="CDD:187176"
gene complement(125854..127224)
/locus_tag="Rleg_6695"
/db_xref="GeneID:8022605"
CDS complement(125854..127224)
/locus_tag="Rleg_6695"
/inference="protein motif:PFAM:PF01425"
/note="PFAM: Amidase;
KEGG: ret:RHE_PE00322 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984696.1"
/db_xref="GI:241666612"
/db_xref="InterPro:IPR000120"
/db_xref="GeneID:8022605"
/translation="MSKSYGAMSVAQLSVLIQGGAVDPVEVTEAVFDSIAHYADKAVF
TTLLESRAMEEARASSRRLREGRSLGLLDGIPIAWKDLFDMEGLPTTAGSVVLAKDMP
AKRDAAVVALLRQAGMVAVGRTNMSEFAFSGLGINPHYGTPVNPRGTDLPRIPGGSSS
GAGVVVAAGLVPVAMGTDTGGSVRIPAAFNGIVGYKATRGRHAMAGVYPLAKSLDSLG
PLCRSVRDAVWIDVAMRGLTAPDVVELPLQGLELIVPENIVFDGAEPGVVAAFEAALE
RLQKAGAKVARTVIPAFDEIFELMTRYGPLVTAEAFALHRERLAGPDADRMDHRVVMR
TRLGSKTTLPDYLAILDARSRLIADVERLVGDRLLAFPTVAHVAPPIGPLEQDDELFF
ATNNKTLRNTALGNFLDWCGVSIPCGTGEAGMPVGLLLSATTHRDEALLGIALAAEPI
IRDDFA"
misc_feature complement(125863..127218)
/locus_tag="Rleg_6695"
/note="hypothetical protein; Provisional; Region:
PRK06102"
/db_xref="CDD:180400"
misc_feature complement(125881..127008)
/locus_tag="Rleg_6695"
/note="Amidase; Region: Amidase; cl11426"
/db_xref="CDD:212316"
gene 127464..127778
/locus_tag="Rleg_6696"
/db_xref="GeneID:8022606"
CDS 127464..127778
/locus_tag="Rleg_6696"
/inference="similar to AA sequence:KEGG:RHE_PE00321"
/note="KEGG: ret:RHE_PE00321 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984697.1"
/db_xref="GI:241666613"
/db_xref="GeneID:8022606"
/translation="MTDCETLSRRQDMVTLHAKEDETAGLGERDYVDHVSAQKLSAFE
RVVVVGALVLLSFAGFAAYSSGNTDPMTTSAIAATAGDNMPPHPAYGHCRDSSPYAER
VC"
gene 127851..128291
/locus_tag="Rleg_6697"
/db_xref="GeneID:8022607"
CDS 127851..128291
/locus_tag="Rleg_6697"
/inference="protein motif:PFAM:PF08837"
/note="PFAM: Protein of unknown function DUF1810;
KEGG: rec:RHECIAT_PA0000248 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984698.1"
/db_xref="GI:241666614"
/db_xref="InterPro:IPR014937"
/db_xref="GeneID:8022607"
/translation="MAGDIDYKLHRFIDAQNGVYEQALLELKAGRKTSHWMWFIFPQV
AGLGTSAMAEKYAIRSAEEAAAYLADPILSSRLLRCVEAILSVNGRSAHEILGSPDDV
KLRSSMTLFAAISDHGSPFHQVIEHFYQGKFDDRTMKILSASTD"
misc_feature 127866..128276
/locus_tag="Rleg_6697"
/note="Protein of unknown function (DUF1810); Region:
DUF1810; pfam08837"
/db_xref="CDD:149784"
gene complement(128340..128528)
/locus_tag="Rleg_6698"
/db_xref="GeneID:8022608"
CDS complement(128340..128528)
/locus_tag="Rleg_6698"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000247"
/note="KEGG: rec:RHECIAT_PA0000247 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984699.1"
/db_xref="GI:241666615"
/db_xref="GeneID:8022608"
/translation="MNYVYLKRLYAKRAELEAKLELHDARYCFGEEEVDDGTDSDLRQ
RLSEISEEIATLESRPGR"
gene complement(128611..129234)
/locus_tag="Rleg_6699"
/db_xref="GeneID:8022609"
CDS complement(128611..129234)
/locus_tag="Rleg_6699"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: regulatory protein TetR;
KEGG: ret:RHE_PE00303 TetR family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_002984700.1"
/db_xref="GI:241666616"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8022609"
/translation="MSRTTSSKKSETSNEISAAVLEDRIPPRERIVSTASELFRERGI
RGIGVDAIADAALTNKMTLYRHFGSKDELVCETLRRASEKAGTIWRDLEAAYPDNPRA
QLDAWVELRAQCLNGEPAGCDLANAAIELKGEGHPAHEMIERHKAEQRDRLAALCSAA
GAREPQLLADTLTLLLEGARVSRQAMGAAGCCGHFAKACQAAIASFA"
misc_feature complement(<128770..129153)
/locus_tag="Rleg_6699"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature complement(129013..129144)
/locus_tag="Rleg_6699"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 129362..129577
/locus_tag="Rleg_6700"
/db_xref="GeneID:8022610"
CDS 129362..129577
/locus_tag="Rleg_6700"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000245"
/note="KEGG: rec:RHECIAT_PA0000245 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984701.1"
/db_xref="GI:241666617"
/db_xref="GeneID:8022610"
/translation="MTKTRDDLTISEALRDPLIAMVLRADGVKLEDFKQLLETAARKR
EPRSPSVGNMIGALASRANLPAMPCFG"
gene complement(129660..130517)
/locus_tag="Rleg_6701"
/db_xref="GeneID:8022611"
CDS complement(129660..130517)
/locus_tag="Rleg_6701"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR
domain protein;
KEGG: ret:RHE_PE00299 oxidoreductase"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_002984702.1"
/db_xref="GI:241666618"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR002424"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8022611"
/translation="MPNYPTPPFPSQKQPMPGFTAQMDPVPDHGEKSYRGSERLKGKR
AIITGGDSGIGRAVAIAYAREGADLLLSYLDEDEDADETKRLVEQAGRKAILVSGDIQ
DPAHCRQIVETAVKELGGIDILVNNAAHQASFKSIDEISDEEWELTFKVNIHSMFYLT
KAAVAHMKPGSAIINTASINSDNPNPTLLAYATTKGAIQNFTAGLAQLLAEKGIRANA
VAPGPIWTPLIPSTLPEESVSNFGKQVPMKRPGQPAELATAYVMLADPLSSYVSGTTI
AVTGGKPIL"
misc_feature complement(129675..130511)
/locus_tag="Rleg_6701"
/note="short chain dehydrogenase; Provisional; Region:
PRK06701"
/db_xref="CDD:180661"
misc_feature complement(129666..130469)
/locus_tag="Rleg_6701"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:214164"
misc_feature complement(order(129846..129857,129933..129935,
129945..129947,129984..129992,130131..130139,
130293..130301,130356..130358,130362..130367,
130371..130373))
/locus_tag="Rleg_6701"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(129933..129935,129945..129947,
129984..129986,130062..130064))
/locus_tag="Rleg_6701"
/note="active site"
/db_xref="CDD:187535"
gene 130782..131615
/locus_tag="Rleg_6702"
/db_xref="GeneID:8022612"
CDS 130782..131615
/locus_tag="Rleg_6702"
/inference="protein motif:PFAM:PF09339"
/note="PFAM: regulatory protein IclR; Transcriptional
regulator IclR;
SMART: regulatory protein IclR;
KEGG: ret:RHE_PE00298 IclR family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="IclR family transcriptional regulator"
/protein_id="YP_002984703.1"
/db_xref="GI:241666619"
/db_xref="InterPro:IPR005471"
/db_xref="InterPro:IPR014757"
/db_xref="GeneID:8022612"
/translation="MDGKTSAAVYSEDEGVAGETGGKTARRARVSGIDRALQVIDHLY
ETGSPAGVYAIAKAVKAPLSTVYVIVDDLVEKNMLTRQADGSIWLGARLYHYGLAYAR
SLDFMSIATHEMHDLCRQAGETVQVCGRDGDYMLVLAMADGPSHFQVASRVGTRVPLN
WTASGRLLVGHLAEDERIELFKRCARSSPTGRAEIDPGTLSEAAGKAFESRLSIQAGE
SDYAVACIASPICDRDGQCVATISIVLPEQKAFSDENHYTAHVRSSAERIEKLMGWRN
R"
misc_feature 130872..131603
/locus_tag="Rleg_6702"
/note="Transcriptional regulator [Transcription]; Region:
IclR; COG1414"
/db_xref="CDD:31604"
misc_feature 130875..131030
/locus_tag="Rleg_6702"
/note="IclR helix-turn-helix domain; Region: HTH_IclR;
pfam09339"
/db_xref="CDD:150115"
misc_feature 131232..131591
/locus_tag="Rleg_6702"
/note="Bacterial transcriptional regulator; Region: IclR;
pfam01614"
/db_xref="CDD:201890"
gene complement(131638..132846)
/locus_tag="Rleg_6703"
/db_xref="GeneID:8022613"
CDS complement(131638..132846)
/locus_tag="Rleg_6703"
/inference="protein motif:PFAM:PF01979"
/note="Catalyzes the reversible hydrolysis of the amide
bond within dihydroorotate. This metabolic intermediate is
required for the biosynthesis of pyrimidine nucleotides"
/codon_start=1
/transl_table=11
/product="dihydroorotase"
/protein_id="YP_002984704.1"
/db_xref="GI:241666620"
/db_xref="InterPro:IPR006680"
/db_xref="GeneID:8022613"
/translation="MPGDQAKKPLLLINVKPMAFGSGPSEGATDILVNADGKIAEIGP
SLTVSQDVTRIDGKGAFISPGWVDLHVHIWHGGTDISIRPSECGLERGVTTLVDAGSA
GEANFHGFREYIIEPSRERIKAFLNLGSIGLVACNRVAELRDIRDIDLDRILEVYAAN
SEHIVGIKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEILGP
GDVVTHCFNGKAGSSIMEDEDLFNLAERCASEGIRLDIGHGGASFSFKVAEAAIARGL
LPFSISTDLHGHSMNFPVWDLATTMSKLLSVGMPFDKVVEAVTHAPASVIKLSMENRL
AVGSQAEFTIFDLVDSDLEATDSNGDVSVLNKLFEPRYAVMGADAFAASRYVPRARKL
VRHSHGYSYR"
misc_feature complement(131707..132819)
/locus_tag="Rleg_6703"
/note="dihydroorotase; Provisional; Region: PRK09237"
/db_xref="CDD:181717"
misc_feature complement(131737..132756)
/locus_tag="Rleg_6703"
/note="Metallo-dependent hydrolases, subgroup B is part of
the superfamily of metallo-dependent hydrolases, a large
group of proteins that show conservation in their
3-dimensional fold (TIM barrel) and in details of their
active site. The vast majority of the...; Region:
Met_dep_hydrolase_B; cd01307"
/db_xref="CDD:30050"
misc_feature complement(order(131995..131997,132175..132177,
132244..132246,132631..132633,132637..132639))
/locus_tag="Rleg_6703"
/note="active site"
/db_xref="CDD:30050"
gene complement(133053..133922)
/locus_tag="Rleg_6704"
/db_xref="GeneID:8022614"
CDS complement(133053..133922)
/locus_tag="Rleg_6704"
/inference="protein motif:TFAM:TIGR02937"
/note="TIGRFAM: RNA polymerase sigma factor, sigma-70
family;
PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4
type 2;
KEGG: rec:RHECIAT_PA0000240 probable RNA polymerase sigma
factor protein"
/codon_start=1
/transl_table=11
/product="RNA polymerase, sigma-24 subunit, ECF subfamily"
/protein_id="YP_002984705.1"
/db_xref="GI:241666621"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="GeneID:8022614"
/translation="MDEKKWLTEEFEANRAHLRAAAFRMLGSRSEAEDAVQEAWLRLS
RTDTTGVGNLGGWLTTVVARICLDMLRARKTRREEPLEVPDHGGIADPANDPEREAAF
ADSVGLALLVVLQTLAPAERVAFVLHDMFDLPFDEIAPIIGRSSAATRQLASRARRRV
QGVDEAPDVDFGHKRTIAEAFLTASRNGDLEGLIAVLAPDVVFRPDATAARFGTIGEM
RGATDVAEAFKGRAQAAEIAIVGGELGFVVEIQGQLRVVVALTIADGRIAAIDAIADP
EHLERLDYSILGD"
misc_feature complement(133077..133904)
/locus_tag="Rleg_6704"
/note="RNA polymerase sigma factor SigJ; Provisional;
Region: PRK09636"
/db_xref="CDD:182009"
misc_feature complement(133701..133892)
/locus_tag="Rleg_6704"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature complement(133443..133601)
/locus_tag="Rleg_6704"
/note="Sigma-70, region 4; Region: Sigma70_r4_2;
pfam08281"
/db_xref="CDD:203898"
misc_feature complement(order(133452..133454,133458..133463,
133467..133475,133479..133484,133488..133490,
133518..133523,133539..133541,133569..133571))
/locus_tag="Rleg_6704"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 134030..134506
/locus_tag="Rleg_6705"
/db_xref="GeneID:8022615"
CDS 134030..134506
/locus_tag="Rleg_6705"
/inference="protein motif:TFAM:TIGR00778"
/note="TIGRFAM: alkylhydroperoxidase like protein, AhpD
family;
PFAM: carboxymuconolactone decarboxylase;
KEGG: ret:RHE_PE00293 hypothetical protein"
/codon_start=1
/transl_table=11
/product="alkylhydroperoxidase like protein, AhpD family"
/protein_id="YP_002984706.1"
/db_xref="GI:241666622"
/db_xref="InterPro:IPR003779"
/db_xref="InterPro:IPR004675"
/db_xref="GeneID:8022615"
/translation="MQEKLVMQERMGNPALVLPAAMQALNALSKVPTETGLSPKLLEL
VNLRASQINGCSVCIDGHWRIARKHGETDERLFAVAGWRDAPYYSDAERAALGLAEAI
TRLSDRADPVPDDIWDEATRHYDGKSLAALVIAIANINVWNRLNVATRQVAGQWKP"
misc_feature 134084..134332
/locus_tag="Rleg_6705"
/note="Carboxymuconolactone decarboxylase family; Region:
CMD; pfam02627"
/db_xref="CDD:202318"
misc_feature <134129..134479
/locus_tag="Rleg_6705"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG2128"
/db_xref="CDD:32311"
gene complement(134600..135892)
/locus_tag="Rleg_6706"
/db_xref="GeneID:8022616"
CDS complement(134600..135892)
/locus_tag="Rleg_6706"
/inference="protein motif:TFAM:TIGR02629"
/note="TIGRFAM: L-rhamnose catabolism isomerase;
PFAM: xylose isomerase;
KEGG: rec:RHECIAT_PA0000238 putative sugar isomerase
protein"
/codon_start=1
/transl_table=11
/product="L-rhamnose catabolism isomerase"
/protein_id="YP_002984707.1"
/db_xref="GI:241666623"
/db_xref="InterPro:IPR012307"
/db_xref="InterPro:IPR013451"
/db_xref="GeneID:8022616"
/translation="MTDSRIAPDLVATDNDKRATALKADYEALGATLARRGVDIEAVT
RKVAEFFVAVPSWGVGTGGTRFARFPGTGEPRGIFDKLDDCAVINQLTQATPNVSLHI
PWDKADASELKAKGNALGLGFDAMNSNTFSDAPGQAHSYKYGSLSHTDAATRAQAVEH
NLECIEIGKALGSKALTVWIGDGSNFPGQSHFTKAFERYLASMADIYKALPDDWKLFS
EHKMYEPAFYSTIVQDWGSNYLIAQTLGPKAYCLVDLGHHAPNTNIEMIVARLIQFGK
LGGFHFNDSKYGDDDLDAGAIDPYRLFLVFNELVDAEQRGVNDFNPAHMIDQSHNVTD
PIESLINSANEIRRAYAQALLVDRKALSGYQDDNDALMASETLKRAYRADVEPILAEA
RRRAGGAIDPIAVYRASGYRRQVAAERPASAAGGGGII"
misc_feature complement(134603..135889)
/locus_tag="Rleg_6706"
/note="Predicted sugar isomerase [Cell envelope
biogenesis, outer membrane]; Region: COG4952"
/db_xref="CDD:34560"
misc_feature complement(134630..135865)
/locus_tag="Rleg_6706"
/note="L-rhamnose catabolism isomerase, Pseudomonas
stutzeri subtype; Region: L_rham_iso_rhiz; TIGR02629"
/db_xref="CDD:131677"
gene 135971..136129
/locus_tag="Rleg_6707"
/db_xref="GeneID:8022617"
CDS 135971..136129
/locus_tag="Rleg_6707"
/inference="protein motif:PFAM:PF01679"
/note="PFAM: protein of unknown function UPF0057;
KEGG: atu:Atu0413 stress induced protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984708.1"
/db_xref="GI:241666624"
/db_xref="InterPro:IPR000612"
/db_xref="GeneID:8022617"
/translation="MDVVRILLAIILPPLGVFLQVGIGLHFWLNILLTLCGYVPGIIH
AIWVILRK"
misc_feature 135971..136123
/locus_tag="Rleg_6707"
/note="Proteolipid membrane potential modulator; Region:
Pmp3; pfam01679"
/db_xref="CDD:201919"
gene complement(136174..138270)
/locus_tag="Rleg_6708"
/db_xref="GeneID:8022618"
CDS complement(136174..138270)
/locus_tag="Rleg_6708"
/inference="protein motif:TFAM:TIGR02632"
/note="TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol
dehydrogenase;
PFAM: short-chain dehydrogenase/reductase SDR; class II
aldolase/adducin family protein; KR domain protein;
NAD-dependent epimerase/dehydratase;
KEGG: rec:RHECIAT_PA0000237 putative oxidoreductase
protein, short-chain dehydrogenases/reductases (SDR)
family"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase"
/protein_id="YP_002984709.1"
/db_xref="GI:241666625"
/db_xref="InterPro:IPR001303"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR013454"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8022618"
/translation="MAANVRLLENRWDDAYAAGLDEPGKLLYRSNLLGADKRITNYGG
GNTSAKVLETDPLTGGKVNVLWVKGSGGDVGTIKLDGFATLYQDKLESLKSIYKGVED
EDRMVGFLPHCTFNLNARAASIDTPLHGFVPFTHVDHMHPDAIIAIAASKNSKELTQQ
IFGDEIGWLPWRRPGFQLGLDLGAFVAANPNAKGVVLESHGLFTWANDAKACYELTLD
IINKAIVWFAEKTEGKTIFGGALTQSLPVAERRAIAARLMPEIRGRIGKQERKLGHFD
DQDAVLEFVNSSDLRPLGALGTSCPDHFLRTKIRPLIVDFDPAKPDVDAIVAGLDKAL
EDYRADYARYYNDCKHDNSPAIRDANPVIFLVPGVGMLSFARDKATARIASEFYVNAI
NVMRGASTVSEYQGLPEQEAFDIEYWLLEEAKLQRMPKPKSLAGRVAFVTGGAGGIGR
ATAARLVGEGACVVLADIDQTALEGTEADFVKKFGADAVRSVRLDVTKEDAVIASFAE
ACVEFGGIDILVSNAGIASSAPIELTELATWNRNIDILATGYFLVSREAFRLFRRQTL
GGNVIFVASKNGLAASPNASAYCTAKAAEIHLARCLALEGADAGIRVNTVNPDAVLRG
SKIWSGEWREQRAASSKIEVDDLEEHYRKRSMLKLNVFPEDIAEAIYFLASDLSAKST
GNIINVDAGNVQSFTR"
misc_feature complement(136177..138204)
/locus_tag="Rleg_6708"
/note="rhamnulose-1-phosphate aldolase/alcohol
dehydrogenase; Region: RhaD_aldol-ADH; TIGR02632"
/db_xref="CDD:131680"
misc_feature complement(137590..138192)
/locus_tag="Rleg_6708"
/note="Class II Aldolase and Adducin N-terminal domain;
Region: Aldolase_II; smart01007"
/db_xref="CDD:198075"
misc_feature complement(136195..136905)
/locus_tag="Rleg_6708"
/note="rhamnulose-1-phosphate aldolase/alcohol
dehydrogenase, classical (c) SDRs; Region: R1PA_ADH_SDR_c;
cd08943"
/db_xref="CDD:187647"
misc_feature complement(order(136399..136404,136408..136419,
136495..136497,136507..136509,136546..136554,
136636..136638,136699..136707,136783..136791,
136864..136872))
/locus_tag="Rleg_6708"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187647"
misc_feature complement(order(136495..136497,136507..136509,
136546..136548,136633..136635))
/locus_tag="Rleg_6708"
/note="active site"
/db_xref="CDD:187647"
gene 138469..139281
/locus_tag="Rleg_6709"
/db_xref="GeneID:8022619"
CDS 138469..139281
/locus_tag="Rleg_6709"
/inference="protein motif:PFAM:PF08220"
/note="PFAM: regulatory protein DeoR;
SMART: regulatory protein DeoR;
KEGG: rec:RHECIAT_PA0000236 probable transcriptional
regulator protein, DeoR family"
/codon_start=1
/transl_table=11
/product="DeoR family transcriptional regulator"
/protein_id="YP_002984710.1"
/db_xref="GI:241666626"
/db_xref="InterPro:IPR001034"
/db_xref="InterPro:IPR014036"
/db_xref="GeneID:8022619"
/translation="MHERERHRIILSAVQEKSVVTVQDISELTEASEATIRRDIAALH
VQGKIRRVRGGAEAVHPPQLGNLAGRPFRVSESVNIDKKRAIARQAVELCDPGDAIII
NGGTTTFQMVHFMAAHRLQVMTNSFAIAEHLVKHSKNTVTVPGGAIYREQSLILSPFD
NDAIRNFYARRFFIGAQGIGPLGIMEADALIIQSEQKLMHQADELVVMADSSKFHRRS
SLILCPLERVSTIITDDGIPEESVRMIENAGIRLIVASPVAQAIKEDSSSVA"
misc_feature 138469..139236
/locus_tag="Rleg_6709"
/note="Transcriptional regulators of sugar metabolism
[Transcription / Carbohydrate transport and metabolism];
Region: GlpR; COG1349"
/db_xref="CDD:31540"
misc_feature 138484..138639
/locus_tag="Rleg_6709"
/note="helix_turn_helix, Deoxyribose operon repressor;
Region: HTH_DEOR; smart00420"
/db_xref="CDD:197714"
misc_feature 138697..139176
/locus_tag="Rleg_6709"
/note="DeoR C terminal sensor domain; Region: DeoRC;
pfam00455"
/db_xref="CDD:201239"
gene 139330..140325
/locus_tag="Rleg_6710"
/db_xref="GeneID:8022620"
CDS 139330..140325
/locus_tag="Rleg_6710"
/inference="protein motif:TFAM:TIGR02637"
/note="TIGRFAM: rhamnose ABC transporter periplasmic
rhamnose-binding protein;
KEGG: ret:RHE_PE00289 sugar ABC transporter,
substrate-binding protein"
/codon_start=1
/transl_table=11
/product="rhamnose ABC transporter periplasmic
rhamnose-binding protein"
/protein_id="YP_002984711.1"
/db_xref="GI:241666627"
/db_xref="InterPro:IPR013459"
/db_xref="GeneID:8022620"
/translation="MKLAKKLAIGVAFAVAMMAGTASAADIKIGLVVKSLGNGFFDAA
NKGAQEAAKELGGVEVIYTGPTTTTAEGQIEVINSLIAQGVSAIAVSANDPDALVPAL
KKAAQRGIKVISWDSGVAPEGRILQLNPSSNELIGKMCLTLVKDHLDGGKGDFAILSA
TTTSTNQNIWIDQMKKQLKDFPGLNLVTTVYGDDLSDKSYREAEGLLKANPNIKVIVA
PTTVGVLAASKVVEDKGLVGKVYVTGLGLPSEMAGAIKSGATKEFAIWNPIDLGYSAT
QIAYRLVKGETDGKPGSEIEVGRMGKIKVGDNGEAAMADPFVYNASNIDQFSKVF"
sig_peptide 139330..139404
/locus_tag="Rleg_6710"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.997 at
residue 25"
misc_feature 139411..140304
/locus_tag="Rleg_6710"
/note="Periplasmic binding domain of autoinducer-2 (AI-2)
receptor LsrB from Salmonella typhimurium and its close
homologs; Region: PBP1_LsrB_Quorum_Sensing; cd06302"
/db_xref="CDD:107297"
misc_feature 139414..140316
/locus_tag="Rleg_6710"
/note="rhamnose ABC transporter, rhamnose-binding protein;
Region: RhaS; TIGR02637"
/db_xref="CDD:131685"
misc_feature order(139429..139431,139675..139677,139717..139719,
139825..139830,139837..139839,139984..139992,
140125..140127)
/locus_tag="Rleg_6710"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107297"
gene 140399..141934
/locus_tag="Rleg_6711"
/db_xref="GeneID:8022621"
CDS 140399..141934
/locus_tag="Rleg_6711"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: AAA ATPase;
KEGG: rec:RHECIAT_PA0000234 probable sugar ABC
transporter, ATP-binding protein;
SNP /replace=G"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984712.1"
/db_xref="GI:241666628"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022621"
/translation="MNAAFQQTATDSKTGDAPAILEMRGISQIFPGVKALDNVSIALH
PGTVTALIGENGAGKSTLVKILTGIYRPNEGEILVDGQPVTFASAQAAIDAGVTAIHQ
ETVLFDELTVAENIFLGHAPRTRLRTIDWQAMNSRAKALLTALESNIDPTIRLKDLSI
AQRHLVAIARALSIEARIVIMDEPTAALSRKEIDDLFRIVRGLREKGKAILFISHKFD
EVYEIADDFVVFRDGRAVGQGRLKETPQDEIVRMMVGRDVENAFPKVDVAIGGPVLEI
RNYSHRTEFRDISFTLRQGEILGIYGLIGAGRSELSQSLFGITRPASGTMMLEGREIT
IHSPQDAIRAGIVYVPEERGRHGLALPMPIFQNMTLPSLTRTSRRGFLRAAEEFALAR
KYAERLDLRAAALSVPVGTLSGGNQQKVVIGKWLATAPKVIILDEPTKGIDIGSKAAV
HGFISELAAEGLSIIMVSSELPEIIGMSDRVLVMKEGLAAGIFERADLSPEALVRAAT
GNA"
misc_feature 140438..141925
/locus_tag="Rleg_6711"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:31325"
misc_feature 140459..141112
/locus_tag="Rleg_6711"
/note="This family represents the domain I of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses...; Region: ABC_Carb_Monos_I; cd03216"
/db_xref="CDD:72975"
misc_feature 140555..140578
/locus_tag="Rleg_6711"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72975"
misc_feature order(140564..140569,140573..140581,140702..140704,
140942..140947,141041..141043)
/locus_tag="Rleg_6711"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72975"
misc_feature 140693..140704
/locus_tag="Rleg_6711"
/note="Q-loop/lid; other site"
/db_xref="CDD:72975"
misc_feature order(140726..140740,140885..140899)
/locus_tag="Rleg_6711"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72975"
misc_feature 140930..140947
/locus_tag="Rleg_6711"
/note="Walker B; other site"
/db_xref="CDD:72975"
misc_feature 140954..140965
/locus_tag="Rleg_6711"
/note="D-loop; other site"
/db_xref="CDD:72975"
misc_feature 141029..141049
/locus_tag="Rleg_6711"
/note="H-loop/switch region; other site"
/db_xref="CDD:72975"
misc_feature 141206..141859
/locus_tag="Rleg_6711"
/note="This family represents domain II of the
carbohydrate uptake proteins that transport only
monosaccharides (Monos). The Carb_Monos family is
involved in the uptake of monosaccharides, such as
pentoses (such as xylose, arabinose, and ribose) and
hexoses; Region: ABC_Carb_Monos_II; cd03215"
/db_xref="CDD:72974"
gene 141994..142995
/locus_tag="Rleg_6712"
/db_xref="GeneID:8022622"
CDS 141994..142995
/locus_tag="Rleg_6712"
/inference="protein motif:PFAM:PF02653"
/note="PFAM: inner-membrane translocator;
KEGG: ret:RHE_PE00287 sugar ABC transporter, permease
protein"
/codon_start=1
/transl_table=11
/product="inner-membrane translocator"
/protein_id="YP_002984713.1"
/db_xref="GI:241666629"
/db_xref="InterPro:IPR001851"
/db_xref="GeneID:8022622"
/translation="MARLIRKRETLLFLIIVVMIAIFSTRAADFATPENLAGIFNDTS
ILIILALAQMTVILTKSIDLSVAANLAFTGMAIAMMNAAYPDLPLVVLILAAIVIGAC
LGAINGFLVWALEIPPIVVTLGTLTIYRGMAFVLSGGAWVNAHQMTPVFLSVPRTPIL
GLPVLGWVGIVIVLLMYVLLRYTQFGRSAYATGGNPTAAVYAGIDTGWTKFLAFVLSG
ALAGLASYLWVSRYAVAYVDIANGFELDSVAACVIGGISIAGGVGSVAGTVLGALFLG
VIKNALPVIGISPFTQMAISGTVIILAVAFNARRERNRGRIILRDRAAAEIRTEAAA"
sig_peptide 141994..142077
/locus_tag="Rleg_6712"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.975 at
residue 28"
misc_feature 142120..142914
/locus_tag="Rleg_6712"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature 142582..142638
/locus_tag="Rleg_6712"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene 142992..143999
/locus_tag="Rleg_6713"
/db_xref="GeneID:8022623"
CDS 142992..143999
/locus_tag="Rleg_6713"
/inference="protein motif:PFAM:PF02653"
/note="PFAM: inner-membrane translocator;
KEGG: rec:RHECIAT_PA0000232 putative sugar ABC
transporter, permease protein"
/codon_start=1
/transl_table=11
/product="inner-membrane translocator"
/protein_id="YP_002984714.1"
/db_xref="GI:241666630"
/db_xref="InterPro:IPR001851"
/db_xref="GeneID:8022623"
/translation="MSTVSTHEKRVIPDRLGTPFRRIAASWEVLLFAVAVLIFIFNSL
ASPYFLDAWNLSDATFNFTEKAMIAFAMALLVISGEIDLSVAAIIALASTAMGAAAQA
GIGTPGLVAIGIGTGLACGIFNGVLVSVLKLPSIVVTIGTMSLFRGISYIVLGDQAYG
KYPADFAYFGQGYVVWVFSFEFVLFIVLAILFAILLHATNFGRQVYAIGNNDFAARFS
GIPVERVKFILFLLTGVMSGVAAVCLTSRLGSTRPSIAQGWELEVVTMVVLGGISILG
GSGTIVGVVIAAFVMGLVTFGLGLLNVPGIVMSIFIGLLLIITIAIPIIARRIKVMSS
R"
misc_feature 143175..143903
/locus_tag="Rleg_6713"
/note="Transmembrane subunit (TM) of Escherichia coli AraH
and related proteins. E. coli AraH is the TM of a
Periplasmic Binding Protein (PBP)-dependent ATP-Binding
Cassette (ABC) transporter involved in the uptake of the
monosaccharide arabinose. This group...; Region:
TM_PBP1_transp_AraH_like; cd06579"
/db_xref="CDD:119321"
misc_feature 143628..143684
/locus_tag="Rleg_6713"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119321"
gene 143996..144316
/locus_tag="Rleg_6714"
/db_xref="GeneID:8022624"
CDS 143996..144316
/locus_tag="Rleg_6714"
/inference="protein motif:TFAM:TIGR02625"
/note="TIGRFAM: L-rhamnose 1-epimerase;
PFAM: protein of unknown function DUF718;
KEGG: ret:RHE_PE00285 hypothetical protein"
/codon_start=1
/transl_table=11
/product="L-rhamnose 1-epimerase"
/protein_id="YP_002984715.1"
/db_xref="GI:241666631"
/db_xref="InterPro:IPR008000"
/db_xref="InterPro:IPR013448"
/db_xref="GeneID:8022624"
/translation="MTLEKHAFKMQLNPGMEAEYRRRHDEIWPELVDLLHKSGASDYS
IHLDRETNTLFGVLTRPADHTMASLPDHPVVKKWWAHMADIMATNPDNSPVQSDLVTV
FHMP"
misc_feature 144005..144313
/locus_tag="Rleg_6714"
/note="Domain of unknown function (DUF718); Region:
DUF718; pfam05336"
/db_xref="CDD:147492"
gene 144313..145692
/locus_tag="Rleg_6715"
/db_xref="GeneID:8022625"
CDS 144313..145692
/locus_tag="Rleg_6715"
/inference="protein motif:PFAM:PF00370"
/note="PFAM: carbohydrate kinase FGGY;
KEGG: rec:RHECIAT_PA0000230 putative sugar kinase protein;
SNP /replace=G;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="carbohydrate kinase FGGY"
/protein_id="YP_002984716.1"
/db_xref="GI:241666632"
/db_xref="InterPro:IPR000577"
/db_xref="GeneID:8022625"
/translation="MNAISYRRIAVLDIGKTNAKVVVLDSETGAEIAVLKRPNIAIKT
GLYPHYDVEALWSFALDALKSLAREPGFDAISITTHGASAALLGRDGRLAMPVIDYEH
EYPQDIRDAYARLRPSFHETFSPHLAMGLNVGAQLHYQKTAFPEEFAKVATILTYAQY
WTARLTGVAANELTSLGCHTDLWNPKAGRYSSLVDRLAIRDLMAPIRSAFDALGPVLP
DIAAELGLAAPVPVYCGIHDSNASLLPHLVHREAPFAVVSTGTWVINFGVGGDLDHLD
PKRDALANVDAYGRTVPSSRFMGGREFEILSAEIGPADENDTQAAIGPIIDKGMMLLP
NIAPGSGPFPGKTSRWIGAEEASPEERSAAACLYLALMTDACLGLIGAKGPVIVEGPF
ALNGSYLKLLAALTGREVMALPGSTGTSQGAALLTGIRPVSGAETHVPPTDIPGLTAY
RTRWYAAME"
misc_feature 144334..145593
/locus_tag="Rleg_6715"
/note="Novosphingobium aromaticivorans carbohydrate
kinase-like proteins; belongs to the FGGY family of
carbohydrate kinases; Region: FGGY_NaCK_like; cd07772"
/db_xref="CDD:198350"
misc_feature 144337..145674
/locus_tag="Rleg_6715"
/note="Sugar (pentulose and hexulose) kinases
[Carbohydrate transport and metabolism]; Region: XylB;
COG1070"
/db_xref="CDD:31268"
misc_feature order(144337..144339,144343..144345,144349..144351,
144370..144372,144376..144378,144382..144384,
144397..144405,144412..144414,144532..144534,
144538..144540,144667..144672,144679..144681,
144685..144690,144826..144834,144841..144849,
144859..144861,144865..144867,144934..144939,
145009..145011,145018..145020,145030..145035,
145039..145047,145078..145080,145108..145110,
145129..145131,145135..145137,145153..145179,
145183..145185,145564..145593)
/locus_tag="Rleg_6715"
/note="N- and C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:198350"
misc_feature order(144349..144351,144355..144366,144370..144372,
144550..144552,144556..144558,144610..144612,
145024..145029,145087..145095,145102..145104,
145210..145212,145222..145224,145252..145254,
145480..145488,145495..145497,145567..145569)
/locus_tag="Rleg_6715"
/note="putative active site [active]"
/db_xref="CDD:198350"
misc_feature order(144349..144351,144355..144366,144370..144372,
145024..145026,145087..145095,145210..145215,
145219..145224,145252..145257,145261..145263,
145480..145488,145495..145497)
/locus_tag="Rleg_6715"
/note="putative MgATP binding site [chemical binding];
other site"
/db_xref="CDD:198350"
misc_feature order(144349..144351,144358..144360,145024..145026)
/locus_tag="Rleg_6715"
/note="putative catalytic site [active]"
/db_xref="CDD:198350"
misc_feature order(144349..144351,145024..145026)
/locus_tag="Rleg_6715"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:198350"
misc_feature order(144355..144360,144550..144552,144556..144558,
144610..144612,144703..144705,145024..145029,
145093..145095,145102..145104)
/locus_tag="Rleg_6715"
/note="putative carbohydrate binding site [chemical
binding]; other site"
/db_xref="CDD:198350"
gene 145772..146530
/locus_tag="Rleg_6716"
/db_xref="GeneID:8022626"
CDS 145772..146530
/locus_tag="Rleg_6716"
/inference="similar to AA sequence:KEGG:RHE_PE00283"
/note="KEGG: ret:RHE_PE00283 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984717.1"
/db_xref="GI:241666633"
/db_xref="GeneID:8022626"
/translation="MTETFDPRALATRLHSLRQAGRQEATSAFALPTDLHQAMEAQDL
LAAAGGISSNAWKVTVSPQGQAVTGPLHPYAEAVSGADIPWYPGLKFETEIAVRLGSD
LPVRAGIPYSRTEVVEAISAVYLGAELLVSAVKESGNVSFLLFVADRLGNSGYVLGPK
LEKSVVDTAGSTPLKVTHAGRTIYDGPAQHPKGDVLTWLVDYANDGLRPQTSLKSGAL
ITTGTLSGAIELTEPGEIDILLGNSSLSFSVSKV"
misc_feature 145772..146515
/locus_tag="Rleg_6716"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; cl11421"
/db_xref="CDD:211461"
gene 146650..147540
/locus_tag="Rleg_6717"
/db_xref="GeneID:8022627"
CDS 146650..147540
/locus_tag="Rleg_6717"
/inference="protein motif:PFAM:PF00165"
/note="PFAM: helix-turn-helix- domain containing protein
AraC type;
SMART: helix-turn-helix- domain containing protein AraC
type;
KEGG: smd:Smed_2139 helix-turn-helix-domain containing
protein AraC type"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_002984718.1"
/db_xref="GI:241666634"
/db_xref="InterPro:IPR000005"
/db_xref="GeneID:8022627"
/translation="MEMTFQPRMQNKIQGFSVVGGVHRRLWNGIVADVWDVECASYAG
GYYVSRDPRLFIMLDKRGPGNSHIKLSPKEQGTVQDTEKRPISYVPAGMEVWADLTDV
HSVRHLDIHFDTETVSRRLMEDIDPRRLESPQLLFSDERVLSLAQLVAAECLNPEPLH
DLYGDGLALALIIDVLKIAKAMPRKRSKLASWQLRRATEFIEENCLRNIRLEELAGLT
GLSQSHFSHAFKASTGIAPHQWQTNVRLDRAKRLLVESENALTAVAAETGFADQAHFT
RVFRKHIGITPASWKKAQVA"
misc_feature 147250..147375
/locus_tag="Rleg_6717"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature 147271..147522
/locus_tag="Rleg_6717"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature 147412..147519
/locus_tag="Rleg_6717"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 147707..149866
/locus_tag="Rleg_6718"
/db_xref="GeneID:8022628"
CDS 147707..149866
/locus_tag="Rleg_6718"
/inference="protein motif:TFAM:TIGR01783"
/note="TIGRFAM: TonB-dependent siderophore receptor;
PFAM: TonB-dependent receptor plug; TonB-dependent
receptor;
KEGG: sme:SMc01611 putative ferrichrome-iron receptor
precursor protein"
/codon_start=1
/transl_table=11
/product="ferrichrome receptor precursor protein"
/protein_id="YP_002984719.1"
/db_xref="GI:241666635"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR010105"
/db_xref="InterPro:IPR012910"
/db_xref="GeneID:8022628"
/translation="MRGQTRGLNFKVILLAGVAIAGLIAGSAAAQEANSTELAPIVIQ
GGGDTATSPVKGYVAKNSSAGSKSDTPLNEIPQSVSVIGTREMDDRGITNKIDEALLY
TPGVTSQPFGNDGDTDWFYIRGFDATQTGVYFDNLTLFSYGFGGFQLDPFMLERVEVL
KGPASVLYGGANPGGIVNLVRKRPLDEPLFYTEIGINSNGNAFTGFDVSDKVGSSGTM
SYRITGKVAGGDNYSDFSEDLRGFIMPQLTISPDDSTSLTVWGYLAGLDQVHTGNGFF
PYVGTVEDAPFGKIDRDAFYGEPDIDNGSYVQKMIGYEFEHEFDNGIKFSQNARYGHL
DKHEIGPYLNGWVGGVPTGPDYQLARIGFEGRSGVDSVSIDNRLEGETEIGGATHNLL
VGLDYTYYRLENWQACCGSNSISATDPTYGTTQGANFVYADGVVTKNQIGVYAQDRIH
FGDGWLLTLNGRYDYVDIDQDAVIGTTYSTNDSALSGRIGLAYEFDNGLTPYVSAATF
FNPLVGTGVSGALKPEEGEQFEGGIKYEPAFIDGSLTASVFHITKRNNTVTNPLTFAQ
SQLGEVVSRGAELEGKVNINENWKLLASLAYTDMEVMENDANPALVGNSPYIVPKVTA
SLWVDYTLTTGAFEGMSLGAGVRHQGWSWADEANTEKVPAATLVDAAIRYEKENWGAS
LNVANLFDKEYVKGCGGLTVCGYGDARTITFKLSRKW"
misc_feature 147707..149863
/locus_tag="Rleg_6718"
/note="ferrichrome receptor precursor protein;
Provisional; Region: PRK14050"
/db_xref="CDD:172542"
sig_peptide 147707..147799
/locus_tag="Rleg_6718"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.986 at
residue 31"
misc_feature 147938..149863
/locus_tag="Rleg_6718"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(147938..147967,147998..148024,148028..148030,
148064..148081,148100..148123,148157..148189,
148223..148249)
/locus_tag="Rleg_6718"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(148712..148714,148805..148807)
/locus_tag="Rleg_6718"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene 149960..150739
/locus_tag="Rleg_6719"
/db_xref="GeneID:8022629"
CDS 149960..150739
/locus_tag="Rleg_6719"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: AAA ATPase;
KEGG: ret:RHE_PE00282 ferrichrome-iron transporter,
ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984720.1"
/db_xref="GI:241666636"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022629"
/translation="MPSPFLALSAIDYAIGPKSILSGIDLTLERGRIYGLVGPNGSGK
STLLKIIARQVAPKSGAISFDGKPAGDWGSRAFARHVAYMPQFTPATDGMTVRELVAL
GRFPWHGTLGRFTATDRNMVEEAIVRTELEDFADRLVASMSGGERQRAWIAMMLAQDA
RCLLLDEPTSALDLAHQASVLSLVMELSHERGLTVIIVLHDINLAARYCDAIIALKRG
RITAEGTPCEIMQADTLQSIFGVGMGVFPHPVRNEPVSYLL"
misc_feature 149978..150733
/locus_tag="Rleg_6719"
/note="iron-hydroxamate transporter ATP-binding subunit;
Provisional; Region: PRK10575"
/db_xref="CDD:182561"
misc_feature 149978..150631
/locus_tag="Rleg_6719"
/note="ABC transporters, involved in the uptake of
siderophores, heme, and vitamin B12, are widely conserved
in bacteria and archaea. Only very few species lack
representatives of the siderophore family transporters.
The E. coli BtuCD protein is an ABC...; Region:
ABC_Iron-Siderophores_B12_Hemin; cd03214"
/db_xref="CDD:72973"
misc_feature 150071..150094
/locus_tag="Rleg_6719"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72973"
misc_feature order(150080..150085,150089..150097,150215..150217,
150455..150460,150557..150559)
/locus_tag="Rleg_6719"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72973"
misc_feature 150206..150217
/locus_tag="Rleg_6719"
/note="Q-loop/lid; other site"
/db_xref="CDD:72973"
misc_feature 150383..150412
/locus_tag="Rleg_6719"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72973"
misc_feature 150443..150460
/locus_tag="Rleg_6719"
/note="Walker B; other site"
/db_xref="CDD:72973"
misc_feature 150467..150478
/locus_tag="Rleg_6719"
/note="D-loop; other site"
/db_xref="CDD:72973"
misc_feature 150545..150565
/locus_tag="Rleg_6719"
/note="H-loop/switch region; other site"
/db_xref="CDD:72973"
gene 150743..151618
/locus_tag="Rleg_6720"
/db_xref="GeneID:8022630"
CDS 150743..151618
/locus_tag="Rleg_6720"
/inference="protein motif:PFAM:PF01497"
/note="PFAM: periplasmic binding protein;
KEGG: azc:AZC_1624 ABC Fe+3 hydroxamate (ferrichrome)
transporter"
/codon_start=1
/transl_table=11
/product="periplasmic binding protein"
/protein_id="YP_002984721.1"
/db_xref="GI:241666637"
/db_xref="InterPro:IPR002491"
/db_xref="InterPro:IPR008091"
/db_xref="GeneID:8022630"
/translation="MAFFSRRQFLAGAAALLSAPARLRAAEGLRVATLDWALLETLLA
IGANVVAATELRQFREVAVTPDVPATTADLGLRGTPNFEVLRFVRPDLIFNSNFYAWA
DQRMRGVAPVESHAIYKPGESPFSLAEQATLAIGERLQLATARQLTEELAARLDHHRA
LLAAGDGRPVIPINLGDARHFRVFGSDSMFGEVLKRVGLTNAWQAQTSYSAAAPVGIE
ILASMPDAWIVMIPPHPADALATLATSSFWNALPAVREKRVLMLGSINPYGALPAAGR
FADLLAEGLQHAWNG"
sig_peptide 150743..150820
/locus_tag="Rleg_6720"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.981 at
residue 26"
misc_feature 150830..151597
/locus_tag="Rleg_6720"
/note="Helical backbone metal receptor (TroA-like domain).
These proteins have been shown to function in the ABC
transport of ferric siderophores and metal ions such as
Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site
is formed in the interface between...; Region: TroA-like;
cl00262"
/db_xref="CDD:199270"
misc_feature 150833..151534
/locus_tag="Rleg_6720"
/note="Periplasmic binding protein; Region: Peripla_BP_2;
pfam01497"
/db_xref="CDD:144914"
misc_feature order(151052..151057,151064..151066,151151..151153)
/locus_tag="Rleg_6720"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:29734"
gene 151602..153599
/locus_tag="Rleg_6721"
/db_xref="GeneID:8022631"
CDS 151602..153599
/locus_tag="Rleg_6721"
/inference="protein motif:PFAM:PF01032"
/note="part of the FhuBCD ATP-dependent iron (III)
hydroxamate transporter involved in the high-affinity
transport of Fe(3+)-ferrichrome"
/codon_start=1
/transl_table=11
/product="iron-hydroxamate transporter permease subunit"
/protein_id="YP_002984722.1"
/db_xref="GI:241666638"
/db_xref="InterPro:IPR000522"
/db_xref="GeneID:8022631"
/translation="MHGMVSRAKPAGSAGTPVLAILLPVLCITAFALLIVTRPEVPKG
DADAAMLNSVLLWNSIMPRAMLALIAGAALGLSGTLLQRVLRNPIADASTLGIASGAE
LAMTAAMGFSPLLIGFSREMSAFGGGLAAVAIVLALSWRRGLDPVTVALSGLIVSLIA
SALSVTLILSRGEYAMSIYIWGAGSLSQQDWNGALSLGPRLILGFAAALLLVRPLRIL
ALDDSGARSLGLALHSTRLAIIALAVWLAASVISEVGVIGFVGLAAPAIARLAGARST
GKLMLTAPLIGAGLLFLTDCLTQILGPGFTDLAPTGAATALLGGPLLLCLMPRVHSVS
AVATQSTAALNRLAKPLLALGALFTALALIFAVVLTLGPAEDGWHVATGSLLTDLLPF
RLPRTIVAAGAGAMLAAAGFIMQRVTGNPIASPEVLGVSSGAGAGLTVALFLFGFPSP
IIMLLAMALGALAAFLAMIAIAARAQFSPERMLLAGVGIGSFAMAIVTMVLAKGDMRG
YILLTWLSGSTNRAGAFEAWTAIISLVVLTAPLPFLSRWLAILPLGAGPSRAAGLHVG
ASRLALAILAALMTAIASFLVGPLSLTGLIAPHLARLAGFRAPGHQLTASLLLGAGVL
MAADWLSRIVIYPYQVPVGLFAALIGGPYLIWLLSRKEVQQ"
misc_feature 151620..153581
/locus_tag="Rleg_6721"
/note="iron-hydroxamate transporter permease subunit;
Provisional; Region: PRK10577"
/db_xref="CDD:182563"
misc_feature 151845..152519
/locus_tag="Rleg_6721"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cd06550"
/db_xref="CDD:119348"
misc_feature order(151845..151847,151857..151865,152226..152231,
152235..152243,152247..152252,152256..152273,
152277..152285,152406..152408,152427..152429)
/locus_tag="Rleg_6721"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
misc_feature order(151860..151862,151866..151868,151881..151883,
152043..152045,152049..152054,152061..152066,
152073..152078,152085..152087,152094..152099,
152103..152105,152136..152141,152148..152150,
152376..152378)
/locus_tag="Rleg_6721"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature order(152103..152105,152178..152180,152352..152354,
152364..152366,152496..152498)
/locus_tag="Rleg_6721"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
misc_feature 152838..153575
/locus_tag="Rleg_6721"
/note="Transmembrane subunit (TM), of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters involved in the uptake of siderophores, heme,
vitamin B12, or the divalent cations Mg2+ and Zn2+.
PBP-dependent ABC transporters consist of...; Region:
TM_ABC_iron-siderophores_like; cd06550"
/db_xref="CDD:119348"
misc_feature order(152844..152846,152856..152864,153225..153230,
153234..153242,153246..153251,153255..153272,
153276..153284,153405..153407,153426..153428)
/locus_tag="Rleg_6721"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119348"
misc_feature order(152859..152861,152865..152867,152880..152882,
153042..153044,153048..153053,153060..153065,
153072..153077,153084..153086,153093..153098,
153102..153104,153135..153140,153147..153149,
153375..153377,153531..153533,153540..153545,
153552..153554,153561..153566,153573..153575)
/locus_tag="Rleg_6721"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature order(153102..153104,153177..153179,153351..153353,
153363..153365,153495..153497,153522..153524)
/locus_tag="Rleg_6721"
/note="putative PBP binding regions; other site"
/db_xref="CDD:119348"
gene 153596..154645
/locus_tag="Rleg_6722"
/db_xref="GeneID:8022632"
CDS 153596..154645
/locus_tag="Rleg_6722"
/inference="protein motif:PFAM:PF04954"
/note="PFAM: Siderophore-interacting protein; FAD-binding
9 siderophore-interacting domain protein;
KEGG: hypothetical protein ; K07229"
/codon_start=1
/transl_table=11
/product="Siderophore-interacting protein"
/protein_id="YP_002984723.1"
/db_xref="GI:241666639"
/db_xref="InterPro:IPR007037"
/db_xref="InterPro:IPR013113"
/db_xref="GeneID:8022632"
/translation="MMAERFTVSGIAITADPGRMLDEICTHFVEHGTVTRNGDAVTVE
TMIGKADISRDGQALAIELSCRSARALQNVRAILAEHLFDFAGEATLELTWSDAPKAD
RLPDLREIRVIGAKNITPHMRRVTVACDDTRHFADGGLHFRLLIPPKGRPPVWPQLRP
DGRIHWASGEDALTVRIYTIRSVDVERGEMEIDFVLHEGDNMPGAEWAINAKPGDIAG
ALGPGGGGVSDATSIILAGDETALPAISRIAAEIPEGRRLTIFLEVDSAAEEQPLPSA
GILDVTWMHRNGKPAGTLDMIEKSIKNALSDADADTFVWAGCERAEAKRIRDFLKTER
GHDRQRMSIGAYWER"
misc_feature 153635..153883
/locus_tag="Rleg_6722"
/note="Uncharacterized protein conserved in bacteria
(DUF2218); Region: DUF2218; cl01424"
/db_xref="CDD:207408"
misc_feature 153866..154642
/locus_tag="Rleg_6722"
/note="Siderophore-interacting protein [Inorganic ion
transport and metabolism]; Region: ViuB; COG2375"
/db_xref="CDD:32522"
misc_feature 153929..154636
/locus_tag="Rleg_6722"
/note="Siderophore interacting proteins share the domain
structure of the ferredoxin reductase like family.
Siderophores are produced in various bacteria (and some
plants) to extract iron from hosts. Binding constants are
high, so iron can be pilfered from...; Region:
siderophore_interacting; cd06193"
/db_xref="CDD:99790"
misc_feature order(154121..154132,154172..154174,154178..154180,
154184..154186,154199..154210,154313..154315,
154631..154636)
/locus_tag="Rleg_6722"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99790"
misc_feature order(154121..154123,154127..154132)
/locus_tag="Rleg_6722"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99790"
misc_feature order(154199..154201,154208..154210,154217..154219,
154235..154237)
/locus_tag="Rleg_6722"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99790"
misc_feature order(154313..154318,154382..154390,154547..154552)
/locus_tag="Rleg_6722"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99790"
gene complement(154653..155534)
/locus_tag="Rleg_6723"
/db_xref="GeneID:8022633"
CDS complement(154653..155534)
/locus_tag="Rleg_6723"
/inference="protein motif:TFAM:TIGR01692"
/note="TIGRFAM: 3-hydroxyisobutyrate dehydrogenase;
PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP
oxidoreductase coenzyme F420-dependent;
KEGG: ret:RHE_PE00281 putative 3-hydroxyisobutyrate
dehydrogenase protein"
/codon_start=1
/transl_table=11
/product="3-hydroxyisobutyrate dehydrogenase"
/protein_id="YP_002984724.1"
/db_xref="GI:241666640"
/db_xref="InterPro:IPR002204"
/db_xref="InterPro:IPR004455"
/db_xref="InterPro:IPR006115"
/db_xref="InterPro:IPR011548"
/db_xref="GeneID:8022633"
/translation="MARIAFIGLGNMGGPMAANLVKSGHEVLGFDLAASVLKAAEESG
VKPASHASQAVKDAEIIITMLPQGKHVLTAWTDILQSAAQGMLVIDCSTIDVDSSRKA
HEMAKAASCLSLDAPVSGGTGGATAGTLTFMAGGTEDAFARAKPILEAMGKKIVHCGE
AGAGQAAKICNNMILGISMVGVCEAFVLAEKLGLSHQALFDVASTSSGQCWSINTYCP
VPGPVPTSPANNDYKPGFAAALMLKDLRLSQEAALTSGASTPLGAEAAQLYALFDKLG
HGGRDFSAIIEMFREKA"
misc_feature complement(<155013..155528)
/locus_tag="Rleg_6723"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(154665..155519)
/locus_tag="Rleg_6723"
/note="3-hydroxyisobutyrate dehydrogenase; Region: HIBADH;
TIGR01692"
/db_xref="CDD:130753"
gene complement(155544..157139)
/locus_tag="Rleg_6724"
/db_xref="GeneID:8022634"
CDS complement(155544..157139)
/locus_tag="Rleg_6724"
/inference="protein motif:PFAM:PF00732"
/note="PFAM: glucose-methanol-choline oxidoreductase; FAD
dependent oxidoreductase; GMC oxidoreductase;
KEGG: ret:RHE_PE00280 alcohol dehydrogenase"
/codon_start=1
/transl_table=11
/product="glucose-methanol-choline oxidoreductase"
/protein_id="YP_002984725.1"
/db_xref="GI:241666641"
/db_xref="InterPro:IPR000172"
/db_xref="InterPro:IPR006076"
/db_xref="InterPro:IPR007867"
/db_xref="GeneID:8022634"
/translation="MDRYDYIIVGAGSAGCVLANRLSADGRSRVLLLEAGGSDNYHWI
HIPVGYLYCINNPRTDWCFTTAPEAGLNGRALSYPRGKVLGGCSSINGMIYMRGQARD
YDLWRQMGCSGWGWDDVLPFFRKSEDFYRGEDEMHGAGGEWRIEKARVRWAVLDAFQQ
AAREAGIPETADFNRGSNEGSGYFDVNQRSGIRWNTSKAFLRPVMRRSNLTVLTKAQV
RRLLVEEGAVAGVEFQHRGVAKRAYAARETVLSAGSIGSPHILELSGIGRGEVLQRAG
VDVVTEVKGVGENLQDHLQLRLAYKVTGVPTLNEKATKLIGKAAIGLEYLVRRSGPMA
MAPSQLGIFTRSGPDRETPDLQYHVQPVSLEKFGDPVHPFPAITASVCNLRPESRGSV
HLSSPDFAAQPTISPKYLSTQRDRDIAVRSIRLTRRIVAQPSFARFRPEEFKPGPAYQ
TEADLERAAGEIGTTIFHPVGTCRMGADRDSVVDARLRFRALGKLRIADASVMPSITS
GNTNSPTIMIAEKAAAMILEDNR"
misc_feature complement(155559..157139)
/locus_tag="Rleg_6724"
/note="choline dehydrogenase; Validated; Region: PRK02106"
/db_xref="CDD:179368"
misc_feature complement(155574..155984)
/locus_tag="Rleg_6724"
/note="GMC oxidoreductase; Region: GMC_oxred_C; pfam05199"
/db_xref="CDD:203202"
gene complement(157272..158261)
/locus_tag="Rleg_6725"
/db_xref="GeneID:8022635"
CDS complement(157272..158261)
/locus_tag="Rleg_6725"
/inference="protein motif:PFAM:PF02653"
/note="PFAM: inner-membrane translocator;
KEGG: rec:RHECIAT_PA0000225 probable branched-chain amino
acid ABC transporter, permease protein"
/codon_start=1
/transl_table=11
/product="inner-membrane translocator"
/protein_id="YP_002984726.1"
/db_xref="GI:241666642"
/db_xref="InterPro:IPR001851"
/db_xref="GeneID:8022635"
/translation="MADVTETIQTEKSRTALSVQAGFLLAGLLLLLLAPFFFYPIFLM
KLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKAWGLPPELGILIGVAG
AAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEGEDGIQSVPRGHLFGF
IDLNSSTNMYYFVLAVFIIGVLIIWRFINSPFGMILKSIRENEQRAISLGYSVARYKL
GAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTLIGPLFGAGL
VVALENYLATSEFPVTIITGIVFMVCVLIFRRGIIGEFYASRLGRKLGFVYRR"
misc_feature complement(157326..158081)
/locus_tag="Rleg_6725"
/note="Transmembrane subunit (TM) of Escherichia coli LivM
and related proteins. LivM is one of two TMs of the E.
coli LIV-1/LS transporter, a Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette (ABC) transporter
involved in the uptake of...; Region: TM_PBP1_LivM_like;
cd06581"
/db_xref="CDD:119323"
misc_feature complement(157302..>157997)
/locus_tag="Rleg_6725"
/note="ABC-type branched-chain amino acid transport
system, permease component [Amino acid transport and
metabolism]; Region: LivM; COG4177"
/db_xref="CDD:33917"
misc_feature complement(157596..157652)
/locus_tag="Rleg_6725"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119323"
gene complement(158263..159150)
/locus_tag="Rleg_6726"
/db_xref="GeneID:8022636"
CDS complement(158263..159150)
/locus_tag="Rleg_6726"
/inference="protein motif:PFAM:PF02653"
/note="PFAM: inner-membrane translocator;
KEGG: ret:RHE_PE00278 branched chain amino acid ABC
transporter permease"
/codon_start=1
/transl_table=11
/product="inner-membrane translocator"
/protein_id="YP_002984727.1"
/db_xref="GI:241666643"
/db_xref="InterPro:IPR001851"
/db_xref="GeneID:8022636"
/translation="MTMIFGIPLQALLGQLLIGLINGSFYALLSLGLAIIFGLLRVIN
FAHGAQYMLGAFVAYLLLTYAGIGYWPSLILAPVIVGLAGAIIERLFLRRLYDLDPLY
GLLFTFGLALAVEGTFRYLYGSSGQPYATPAALAGGANLGFMFLPIYRGWVVVVSLVV
CLGTWLLIEKTKLGAYLRAATENAVLVQVFGVNVPVLLTLTYALGAGLAAFAGVLAAP
IYQVSPLMGSNMIIVVFAVVVVGGMGSIMGAIITGYVLGIAEGLTKVFYPEASNIVIF
VIMAIVLLIRPAGLFGRDA"
misc_feature complement(158278..159087)
/locus_tag="Rleg_6726"
/note="Transmembrane subunit (TM) of Escherichia coli LivH
and related proteins. LivH is one of two TMs of the E.
coli LIV-1/LS transporter, a Periplasmic Binding Protein
(PBP)-dependent ATP-Binding Cassette (ABC) transporter
involved in the uptake of...; Region: TM_PBP1_LivH_like;
cd06582"
/db_xref="CDD:119324"
misc_feature complement(158542..158598)
/locus_tag="Rleg_6726"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119324"
gene complement(159155..159856)
/locus_tag="Rleg_6727"
/db_xref="GeneID:8022637"
CDS complement(159155..159856)
/locus_tag="Rleg_6727"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: AAA ATPase;
KEGG: ret:RHE_PE00277 branched chain amino acid ABC
transporter ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984728.1"
/db_xref="GI:241666644"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022637"
/translation="MATLLEVQGLNAWYGESHVLHGVDMRVNEGEMITILGRNGVGKT
TTLRTITGIVRARKGKISFAGSDMMQVPLHKTAHRGIGFVPEERGIFSTLTVSENLLL
PPVVAEGGMTLDEIYELFPNLYERRGSPGTKLSGGEQQMLAIARILRTGVRLLILDEP
TEGLAPVIVQRIGEVLKTLKERGMTILLVEQNFRFASRIADRFYLMDHGQMVSEFPVG
ELPQRMDTLHKVLGV"
misc_feature complement(159158..159853)
/locus_tag="Rleg_6727"
/note="ABC-type branched-chain amino acid transport
systems, ATPase component [Amino acid transport and
metabolism]; Region: LivF; COG0410"
/db_xref="CDD:30759"
misc_feature complement(159197..159844)
/locus_tag="Rleg_6727"
/note="LivF (TM1139) is part of the LIV-I bacterial
ABC-type two-component transport system that imports
neutral, branched-chain amino acids. The E. coli
branched-chain amino acid transporter comprises a
heterodimer of ABC transporters (LivF and LivG), a...;
Region: ABC_TM1139_LivF_branched; cd03224"
/db_xref="CDD:72983"
misc_feature complement(159725..159748)
/locus_tag="Rleg_6727"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72983"
misc_feature complement(order(159284..159286,159380..159385,
159599..159601,159722..159730,159734..159739))
/locus_tag="Rleg_6727"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72983"
misc_feature complement(159599..159610)
/locus_tag="Rleg_6727"
/note="Q-loop/lid; other site"
/db_xref="CDD:72983"
misc_feature complement(159428..159457)
/locus_tag="Rleg_6727"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72983"
misc_feature complement(159380..159397)
/locus_tag="Rleg_6727"
/note="Walker B; other site"
/db_xref="CDD:72983"
misc_feature complement(159362..159373)
/locus_tag="Rleg_6727"
/note="D-loop; other site"
/db_xref="CDD:72983"
misc_feature complement(159278..159298)
/locus_tag="Rleg_6727"
/note="H-loop/switch region; other site"
/db_xref="CDD:72983"
gene complement(159856..160638)
/locus_tag="Rleg_6728"
/db_xref="GeneID:8022638"
CDS complement(159856..160638)
/locus_tag="Rleg_6728"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: AAA ATPase;
KEGG: rec:RHECIAT_PA0000222 putative branched-chain amino
acid ABC transporter, ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984729.1"
/db_xref="GI:241666645"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:8022638"
/translation="MAVSAIETQEKPRVVLSARGLRRDFGGFTAVKNVDLDVHDASVH
ALIGPNGAGKTTVFNLLTKFLQPTSGTITLMGTDITKTPPDKVARMGLVRSFQISAVF
PHLTVLDNVRVALQRPNNLSTQFWRPISALDRLNGRAEQLLASVGLSKERDHIAADLS
YGRKRVLEIATTLALDPKVLLLDEPMAGMGQEDVGVVSSIIREVARDRAVLMVEHNLS
VVANICQHVTVLQRGEILAAGDYATVSQDERVRVAYMGTEEH"
misc_feature complement(159868..160605)
/locus_tag="Rleg_6728"
/note="ABC-type branched-chain amino acid transport
systems, ATPase component [Amino acid transport and
metabolism]; Region: LivG; COG0411"
/db_xref="CDD:30760"
misc_feature complement(159889..160593)
/locus_tag="Rleg_6728"
/note="The Mj1267/LivG ABC transporter subfamily is
involved in the transport of the hydrophobic amino acids
leucine, isoleucine and valine. MJ1267 is a
branched-chain amino acid transporter with 29% similarity
to both the LivF and LivG components of the E; Region:
ABC_Mj1267_LivG_branched; cd03219"
/db_xref="CDD:72978"
misc_feature complement(160474..160497)
/locus_tag="Rleg_6728"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72978"
misc_feature complement(order(159994..159996,160087..160092,
160348..160350,160471..160479,160483..160488))
/locus_tag="Rleg_6728"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72978"
misc_feature complement(160348..160359)
/locus_tag="Rleg_6728"
/note="Q-loop/lid; other site"
/db_xref="CDD:72978"
misc_feature complement(160135..160164)
/locus_tag="Rleg_6728"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72978"
misc_feature complement(160087..160104)
/locus_tag="Rleg_6728"
/note="Walker B; other site"
/db_xref="CDD:72978"
misc_feature complement(160069..160080)
/locus_tag="Rleg_6728"
/note="D-loop; other site"
/db_xref="CDD:72978"
misc_feature complement(159988..160008)
/locus_tag="Rleg_6728"
/note="H-loop/switch region; other site"
/db_xref="CDD:72978"
gene complement(160644..161849)
/locus_tag="Rleg_6729"
/db_xref="GeneID:8022659"
CDS complement(160644..161849)
/locus_tag="Rleg_6729"
/inference="protein motif:PFAM:PF01094"
/note="PFAM: Extracellular ligand-binding receptor;
KEGG: rec:RHECIAT_PA0000221 probable branched-chain amino
acid ABC transporter, substrate-binding protein"
/codon_start=1
/transl_table=11
/product="Extracellular ligand-binding receptor"
/protein_id="YP_002984730.1"
/db_xref="GI:241666646"
/db_xref="InterPro:IPR001828"
/db_xref="GeneID:8022659"
/translation="MRKNLIASVAFLLASSTAVLAQSATDGKVKIGILNDQSGVYADF
GGKSSVEAAKMAVEDFGGKVLDVPVEIVDADHQNKPDIASNIARQWYDTEQVDAIMEL
TTSSVALAVQAIAKEKKKIDIVTGAATTDLTGKACSPYGFHWAYDTHALAVGTGGALV
KQGGDSWFFLTADYAFGYSLEQQTSDYVKASGGKVVGAVRHPLSTQDFSSFLLQAQSS
GAKVIGLANAGLDTSNAIKQAAEFGITQGGQHLAALLFTLAEVHGLGLEAAQGLTLTE
GFYWNRDDESRAFAKKFFARTGKMPNMIHTGTYSAVTQYLKAVKKAGTDETEAVAKQL
HELPVDDVFGRGGTVGANGRMIHDMYLLQVKKPSESKEPWDYFNVLATIPGKEAYIDP
AKSGCDLVK"
sig_peptide complement(161784..161849)
/locus_tag="Rleg_6729"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.962 at
residue 22"
misc_feature complement(160752..161765)
/locus_tag="Rleg_6729"
/note="Periplasmic binding protein; Region: Peripla_BP_6;
pfam13458"
/db_xref="CDD:205636"
misc_feature complement(160764..161762)
/locus_tag="Rleg_6729"
/note="Periplasmic solute-binding domain of active
transport proteins that belong to the type I periplasmic
binding fold protein family; Region: PBP1_SBP_like_1;
cd06327"
/db_xref="CDD:107322"
misc_feature complement(order(161085..161087,161166..161168,
161322..161324,161466..161474,161535..161543))
/locus_tag="Rleg_6729"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:107322"
gene complement(162327..162890)
/locus_tag="Rleg_6730"
/db_xref="GeneID:8022660"
CDS complement(162327..162890)
/locus_tag="Rleg_6730"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984731.1"
/db_xref="GI:241666647"
/db_xref="GeneID:8022660"
/translation="MRYCKLNHHRATRFKTGIAAVNSSRFLQSIAEAESDDTRLNFAR
AAIFQLYSACLPTGSAPAQFSVQLSLSQGEAVTLVVRPFVNKIEALGGLVKSLFSTKA
ETVLRVLPCRVEDKIGSGIGLILFVDDEPMITIGSLADDSGLFLRQIESASRNTSGAA
TIGTVVGQRLASVVPLPTGSLDLRKPK"
gene complement(163290..164474)
/locus_tag="Rleg_6731"
/db_xref="GeneID:8022661"
CDS complement(163290..164474)
/locus_tag="Rleg_6731"
/EC_number="3.2.1.78"
/inference="protein motif:PRIAM:3.2.1.78"
/note="PFAM: glycoside hydrolase family 5;
KEGG: mno:Mnod_6857 glycoside hydrolase family 5"
/codon_start=1
/transl_table=11
/product="Mannan endo-1,4-beta-mannosidase"
/protein_id="YP_002984732.1"
/db_xref="GI:241666648"
/db_xref="InterPro:IPR001547"
/db_xref="GeneID:8022661"
/translation="MRRIHRFRNFAVGAVALALFWSAQVGSADAQSSGQQFFVTTKEG
GFLLDGKPFRVAGVNNHYLTFGSSGEVTRVLDDATAMGANVVRTFLQPVIGSLDGRVP
TIWNSKSTADSSNLGTKGIYMMSWDPITNKMVPNDGPDGLQKVDYLIAEAAKRKLKLI
LAFVDFWAYTGGAQQMNAWYGSSDKYTFFAADPRTRRDYKEWVRHVLSRVNTITGVRY
SDDPTIFAWDLANEPDIHPIPLLHDWVSEMSAYVKSLAPKQLVTTGHGNMDQKLSDMN
IPSVDFGTWHGYPSYVKMSHSDFDARIREYCAIGRDVGKPVILEEFGVPRSDADQANA
YGTWLNTIASSDCAGWVVWRLTSTQDSGLYPQDDYDKFDIHNDGSPAWQALRDAALKL
QN"
sig_peptide complement(164391..164474)
/locus_tag="Rleg_6731"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.466 at
residue 28"
misc_feature complement(163416..164330)
/locus_tag="Rleg_6731"
/note="Glycosyl hydrolases family 2, TIM barrel domain;
Region: Glyco_hydro_2_C; cl15381"
/db_xref="CDD:212627"
gene complement(164491..165870)
/locus_tag="Rleg_6732"
/db_xref="GeneID:8022662"
CDS complement(164491..165870)
/locus_tag="Rleg_6732"
/inference="protein motif:PFAM:PF01943"
/note="PFAM: polysaccharide biosynthesis protein;
KEGG: mno:Mnod_6867 polysaccharide biosynthesis protein"
/codon_start=1
/transl_table=11
/product="polysaccharide biosynthesis protein"
/protein_id="YP_002984733.1"
/db_xref="GI:241666649"
/db_xref="InterPro:IPR002797"
/db_xref="GeneID:8022662"
/translation="MMTVSAAIAMVRSLLMNQAVLLLNAGMLGLGTLMTAILGFVYWW
FAARSFSAEAVGLAAAAISLMNLLANLGEVGLGPFLMGEIGRQKRAGPFLTGALLASF
SASIVVGLIYLVIAASTSTQLGSIVGSSATDLFFVAGCALTAVTLVLDQALVGLLRSG
LQLTRNVVFAASKLLLLIALGLTLGRATSGLAIFTTWFAGQLVSLVVVAALLVYAGRR
IFHRPETHAFRPVLGQVFGHHALSMAVQAPALLLPVVVTVMLSAEINAAFYAAWTVLN
VALLVPASLASVLFAIAVREPELFSGRLRLSLGLSMLVCAATALAFLFLSRFMLWIFN
PAYAAIAGNSLQFLGVAAFGMALKYHYLAVQRVRRRLGFATLVLIGAAVLEIVAAAGG
AQFGIAGTANFWVIAVSLQGLFLCPALYWATRRIATPSTTAPPAAAGVSTCGNSLDET
DQFGIASRA"
misc_feature complement(<165367..165810)
/locus_tag="Rleg_6732"
/note="MatE; Region: MatE; cl10513"
/db_xref="CDD:209159"
gene complement(165873..166874)
/locus_tag="Rleg_6733"
/db_xref="GeneID:8022663"
CDS complement(165873..166874)
/locus_tag="Rleg_6733"
/inference="protein motif:PFAM:PF00535"
/note="PFAM: glycosyl transferase family 2;
KEGG: mno:Mnod_6856 glycosyl transferase family 2;
SNP /replace=G"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family 2"
/protein_id="YP_002984734.1"
/db_xref="GI:241666650"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:8022663"
/translation="MDNFQHPVPGKLTTAIVICCYSDKRWDILNKAIEAAARQIPAAD
EIVVIVDHNPALALRLRAKRFETPVRIVENIHPPGLSGARNTGISVSRGEVILFLDDD
AVSDQDLLATLVRQLEDPSVLGAVSAIRPLWETDRPSWFPDEFLWTLGCTYRGLNPGP
VRNLIGASMCIRRDIFDHTGGFDSGLGRTAKALPLGCEETELCIRATKALPHGRFVFE
PSSGSDHAIPADRATWKYFLHRCWAEGLSKARLCLMAGSGEALASEQTYMTRTLPQGV
MRGFADVLLGQPSGLLRVVALVAGLAATAAGFTLGRTRAALKRPFTSVPARALEPVE"
misc_feature complement(<166164..166736)
/locus_tag="Rleg_6733"
/note="Predicted glycosyltransferases [General function
prediction only]; Region: COG1216"
/db_xref="CDD:31409"
misc_feature complement(166212..166736)
/locus_tag="Rleg_6733"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:212311"
misc_feature complement(order(166569..166571,166575..166577,
166725..166727))
/locus_tag="Rleg_6733"
/note="active site"
/db_xref="CDD:132997"
gene complement(166867..167697)
/locus_tag="Rleg_6734"
/db_xref="GeneID:8022664"
CDS complement(166867..167697)
/locus_tag="Rleg_6734"
/inference="protein motif:PFAM:PF07760"
/note="PFAM: Protein of unknown function DUF1616;
KEGG: mno:Mnod_6869 protein of unknown function DUF1616"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984735.1"
/db_xref="GI:241666651"
/db_xref="InterPro:IPR011674"
/db_xref="GeneID:8022664"
/translation="MMARRVFLGTLPLWVLAAALAVTWLPETFSTWEKAVRLVLCAPL
ILYLPGRMLVDTLRIEGDMVTRGTLSVFLSFAACIFCGLLLHVVGHLDARGWVYALGL
TTFAVRWLNVVLQLARPVPAIPWAWPGRRFGTFAASMILATSSVLVARPVALERKPFH
FTELWMVPKWNWTNNVVTVGVRNSEDAKTVYSLDLVLGGTLIGKMPTFELAPSSSQTF
EFSVPTKTRPPARLEAWLFKGGDRGTIYRKVWMTIDPLQFPASTGISLQFADPEMKNG
"
sig_peptide complement(167632..167697)
/locus_tag="Rleg_6734"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.980) with cleavage site probability 0.888 at
residue 22"
misc_feature complement(166936..167601)
/locus_tag="Rleg_6734"
/note="Protein of unknown function (DUF1616); Region:
DUF1616; pfam07760"
/db_xref="CDD:191842"
gene complement(167694..168581)
/locus_tag="Rleg_6735"
/db_xref="GeneID:8022665"
CDS complement(167694..168581)
/locus_tag="Rleg_6735"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: oan:Oant_4241 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984736.1"
/db_xref="GI:241666652"
/db_xref="GeneID:8022665"
/translation="MIDSRIDAFMCVHSRDIEYLLEASLRSYQQHFPDKGNLTMVTDN
PAALRAFLDAKGLVPGAAVTGDNDWLSASELELPGWFRQQIIKLRAFEFCRTEHFCNL
GADTLLLRPIATTDLIDRREPVLYYSSHRLPDLHYRFEKKRLRNVAKILGVEPARSFR
YVDFINDFFCFKREWLIALNDYIASRYGSKPYVELLQGLSASKDQTRFGEWTLYSVFL
LDVMHQSPTMRDARGAYLTQIHSRLGLTLSRLDSKIVHLVQKSFDPNIIRQKLMKVNP
GAAQIIGATAWADAGARPR"
gene complement(168578..170671)
/locus_tag="Rleg_6736"
/db_xref="GeneID:8022666"
CDS complement(168578..170671)
/locus_tag="Rleg_6736"
/inference="similar to AA sequence:KEGG:Mnod_6870"
/note="KEGG: mno:Mnod_6870 putative transmembrane protein;
SNP /replace=G"
/codon_start=1
/transl_table=11
/product="putative transmembrane protein"
/protein_id="YP_002984737.1"
/db_xref="GI:241666653"
/db_xref="GeneID:8022666"
/translation="MTVVKGRTSSDEQKAYQDRAYRHGYTGSVAIPPVDLWIAAFLGL
RRQDSAVGGVADPSSLGMSPVFAFLCSCALVVAAHAANASRLGEGWAVPTFYCAIAAI
FLPAAERIIHPRASRLERLALIVIVTSALFVVRVIRAPVAFIDHDEFLHWATVNDILE
AGRLFLPNPLLPVSPLYPGLELITSALVNLSGLSVFAAGLIVLAAARLMLMLALFLLF
EKITDSARIAAIACLVYMGSSTFLLFDVHYSYESLAIPMLAAVLLASESQRVEPSDAP
RWPTVVATVVLILALAATHHLTSYFCTALLCGTAVMECLRQGASAMQKRRAILLASIA
VIAPVAWSKIVGNPTGSYILPVLEGGIHEVAQLVTSSTSTRKLFVSDTGALAPAWQRY
LTMAGVALICLGLLTGFLRSLVFNGQHRDASILWPPTRWRLWRSSLLQILVLVTLAYP
VSIIFRLTRSGWEIGNRIGSLSFLGVAIVVAVAVAAFWHGTSRGWLRATALAAAATTV
LIAGVISSEGPRILVPAGYEVSADSSSIEPMGISAARWTRKWLGGQHFAADRINRLLL
STYGRQKVSTTLESGQDTGMAITAAALGPMERKLLIDSGVGFVMVDLRLTTGLPGVGV
YFDGGAQDRNHTVPLQSSSLLKFNSEPDVDRTFDNGFMVIFDVGRLGKARQPAVPRKR
TGEPVQSLERTGDLQ"
gene complement(170658..171815)
/locus_tag="Rleg_6737"
/db_xref="GeneID:8022667"
CDS complement(170658..171815)
/locus_tag="Rleg_6737"
/inference="protein motif:PFAM:PF00534"
/note="PFAM: glycosyl transferase group 1;
KEGG: mno:Mnod_6871 glycosyl transferase group 1"
/codon_start=1
/transl_table=11
/product="glycosyl transferase group 1"
/protein_id="YP_002984738.1"
/db_xref="GI:241666654"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:8022667"
/translation="MRILMLSARYLPFAGGTETHVGEVATRLVRKGHKVTVLTGNPHG
LLPAVETRDGVQIVRLKTFPRGRDWCFAPGVFRAVAEGDWDLMHVQGYHTFLAPLGMA
AASRKGLPFVVTFHSGGHSSRFRSSVRRFQHRMLAPLAARAAQLIGVSRFEADLFSQN
MAIARDRFIVIPNGARLPETSGRRPASPHDSPLIVSLGRLERYKGHHRALAAFNVLAS
KFPDMRLRILGEGPYEAKLRQQVAGLGLGNRVEIGVIPPTDRSAMADLLSSAALVVLL
SDYEAHPVAVMEALSVKAPVLTTDTSGFRELAEEGLVRSIPLNASPDFTAREMLAAMD
AGPISIETRLPDWDDCTDQLLMVYRRVLSHPQPELRAGPALLGDLKHDDRC"
misc_feature complement(170727..171815)
/locus_tag="Rleg_6737"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature complement(170739..171812)
/locus_tag="Rleg_6737"
/note="This family is most closely related to the GT1
family of glycosyltransferases and named after YqgM in
Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to...; Region:
GT1_YqgM_like; cd03801"
/db_xref="CDD:99974"
gene complement(171844..172617)
/locus_tag="Rleg_6738"
/db_xref="GeneID:8022668"
CDS complement(171844..172617)
/locus_tag="Rleg_6738"
/inference="protein motif:PFAM:PF00535"
/note="PFAM: glycosyl transferase family 2;
KEGG: mno:Mnod_6872 glycosyl transferase family 2"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family 2"
/protein_id="YP_002984739.1"
/db_xref="GI:241666655"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:8022668"
/translation="MSTIKALESSHSSMPVQGPMFNLPRTSLVIPTLNEAENIKLLLP
RIPTWVHEIIIVDGRSTDGTPDIARSMRDDVKIVLQPKKGKGIALRTGFEAASGDMIV
MLDADGSMDPYEIILFVAALVAGADFVKGSRFMQGGGTSDMTVIRRFGNLGLTLLVRM
LYGSSFSDLCYGYMGFWKRHVPLLRADCDGFEIETLINLRALKNKLKIMEVASFESER
VFGVSNLRALPDGWRVLKTIFRERVSTPTGVQVLEQSIS"
misc_feature complement(171943..172569)
/locus_tag="Rleg_6738"
/note="dolichyl-phosphate beta-D-mannosyltransferase;
Region: PLN02726"
/db_xref="CDD:178327"
misc_feature complement(172015..172536)
/locus_tag="Rleg_6738"
/note="DPM_DPG-synthase_like is a member of the
Glycosyltransferase 2 superfamily; Region:
DPM_DPG-synthase_like; cd04179"
/db_xref="CDD:133022"
misc_feature complement(order(172297..172299,172519..172521,
172525..172527))
/locus_tag="Rleg_6738"
/note="Ligand binding site; other site"
/db_xref="CDD:133022"
misc_feature complement(order(172297..172302,172444..172446))
/locus_tag="Rleg_6738"
/note="Putative Catalytic site; other site"
/db_xref="CDD:133022"
misc_feature complement(172297..172305)
/locus_tag="Rleg_6738"
/note="DXD motif; other site"
/db_xref="CDD:133022"
gene complement(172734..173846)
/locus_tag="Rleg_6739"
/db_xref="GeneID:8022669"
CDS complement(172734..173846)
/locus_tag="Rleg_6739"
/inference="protein motif:PFAM:PF02563"
/note="PFAM: polysaccharide export protein;
KEGG: mno:Mnod_6863 polysaccharide export protein;
SNP /replace=G"
/codon_start=1
/transl_table=11
/product="polysaccharide export protein"
/protein_id="YP_002984740.1"
/db_xref="GI:241666656"
/db_xref="InterPro:IPR003715"
/db_xref="GeneID:8022669"
/translation="MNLAFYESLASVEDRWAGSQGAVPWNFYQRPELTGEYAVEADGT
ISVPLLGRFPVRGLPPSDVEAIILPSYESLVGRKGFVNIVKIEHQPIYITGPVRNPGS
FRYVDGMTVLHAVAQAGGMAAKTIEPWQSVEITRQIERLKVGLSDLKRLASRTEVLRA
KRDSVQIASIGTPVLGPDPDAQRLLDDETWQRQLVTTSKDAQSSAFVKSVADAQTDLD
LRQARVGNYDATIRVRQDRLASIENLAKNKLVTSIELTRAQSELTESEDRKQQAVIDV
ESAKQRLAAAKQDVERDRIERKIEIEKSAADAERGLSTALQTTESDLEIFQSMVSSND
SGDVEFEIVRPGPNGVIVEAATEETVLQPGDLIKVH"
misc_feature complement(<173646..>173771)
/locus_tag="Rleg_6739"
/note="Polysaccharide biosynthesis/export protein; Region:
Poly_export; pfam02563"
/db_xref="CDD:202285"
misc_feature complement(<173484..173576)
/locus_tag="Rleg_6739"
/note="SLBB domain; Region: SLBB; pfam10531"
/db_xref="CDD:204505"
gene 174551..175504
/locus_tag="Rleg_6740"
/db_xref="GeneID:8022670"
CDS 174551..175504
/locus_tag="Rleg_6740"
/inference="protein motif:PFAM:PF03466"
/note="PFAM: LysR substrate-binding; regulatory protein
LysR;
KEGG: ret:RHE_PE00273 LysR family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002984741.1"
/db_xref="GI:241666657"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:8022670"
/translation="MNNPPQFTWDDLQFFLAVARTGQLSTAARQLRSSHATVSRRIDR
LEFTLKVKLFERNPRGYVLTAMGTRFVETAERMEQETERLRADLADGSMAQRGLVRLS
APEGFANFFFATVLPQFAAQHPHLSLELVTIQQIMSLSRKEADLSVVLDEPKGGAYFA
EKLTDYHLQVYGSREYLAKAPDINSREDLLSHPFVSYIEEMIFAPGLDYLGDVHPRIK
PQFQSSSIFAQLTATRNGLGLCILPYFFASRYPELVRVLPDEIDLKRHYWITCHRDLK
QAPRVRAVIDFLREAVRGEDARFVPPYVTAAGPARRAKAET"
misc_feature 174569..175444
/locus_tag="Rleg_6740"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature 174575..174751
/locus_tag="Rleg_6740"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 174839..175414
/locus_tag="Rleg_6740"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:209302"
misc_feature order(174887..174892,174896..174901,174908..174910,
174920..174922,174926..174946,175208..175225,
175241..175246,175250..175255)
/locus_tag="Rleg_6740"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene complement(175505..175843)
/locus_tag="Rleg_6741"
/db_xref="GeneID:8022671"
CDS complement(175505..175843)
/locus_tag="Rleg_6741"
/inference="protein motif:PFAM:PF07883"
/note="PFAM: cupin;
KEGG: rec:RHECIAT_PA0000218 putative pectin degradation
protein"
/codon_start=1
/transl_table=11
/product="cupin"
/protein_id="YP_002984742.1"
/db_xref="GI:241666658"
/db_xref="InterPro:IPR013096"
/db_xref="GeneID:8022671"
/translation="MSSSDLFVSAEGAEWVNPEPGVVRRIMTYLPEMMLVEVAFESGA
VGAAHSHPHIQASYVAEGSFEVTIDGRTEVLKQGGSFIVPPNLIHGVKALEKGRLIDA
FTPHRAEFLK"
misc_feature complement(175544..175738)
/locus_tag="Rleg_6741"
/note="Cupin domain; Region: Cupin_2; pfam07883"
/db_xref="CDD:203791"
gene 176007..177194
/locus_tag="Rleg_6742"
/db_xref="GeneID:8022672"
CDS 176007..177194
/locus_tag="Rleg_6742"
/inference="protein motif:PFAM:PF00441"
/note="PFAM: acyl-CoA dehydrogenase domain protein;
Acyl-CoA dehydrogenase type 2 domain;
KEGG: rec:RHECIAT_PA0000217 glutaryl-CoA dehydrogenase
protein"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase domain protein"
/protein_id="YP_002984743.1"
/db_xref="GI:241666659"
/db_xref="InterPro:IPR006089"
/db_xref="InterPro:IPR006090"
/db_xref="InterPro:IPR006091"
/db_xref="InterPro:IPR006092"
/db_xref="InterPro:IPR013107"
/db_xref="GeneID:8022672"
/translation="MQHTREVFDWADPFRLVEQLTSEERMVQDTAHAYAQEKLAPRVL
DAFRNEKTDPEIFREMGELGLLGPTISPDYGGAGLGYVAYGLIAREVEKVDSGYRSMM
SVQSSLVMVPIETFGSEAQKLKYLPKLATGEWIGCFGLTEPDHGSDPGSMATRAKKVD
GGYSLTGSKTWISNAPIADVFVVWAKTEDGLIRGFILEKGWKGLSAPAIHGKVGLRAS
ITGEVVMDGVFVPEENLLPDVTGLKGPFTCLNSARFGIAWGALGAAEDCYARARQYTL
ERKQFGRPLAANQLIQKKLADMAAEISLGLQGCLRLGRMKEEGHPPVELTSILKRNSC
GKALEIARAARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDIHALIIGRAITGIAA
FAN"
misc_feature 176028..177185
/locus_tag="Rleg_6742"
/note="Glutaryl-CoA dehydrogenase; Region: GCD; cd01151"
/db_xref="CDD:173840"
misc_feature 176064..177185
/locus_tag="Rleg_6742"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:32143"
misc_feature order(176418..176420,176424..176429,176442..176447,
176517..176519,176523..176525,177108..177110,
177129..177131,177135..177137)
/locus_tag="Rleg_6742"
/note="FAD binding site [chemical binding]; other site"
/db_xref="CDD:173840"
misc_feature order(176445..176447,176730..176732,176751..176756,
176763..176765,177120..177125)
/locus_tag="Rleg_6742"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:173840"
misc_feature 177123..177125
/locus_tag="Rleg_6742"
/note="catalytic base [active]"
/db_xref="CDD:173840"
gene 177385..177846
/locus_tag="Rleg_6743"
/db_xref="GeneID:8022673"
CDS 177385..177846
/locus_tag="Rleg_6743"
/inference="similar to AA sequence:KEGG:RHE_PE00271"
/note="KEGG: ret:RHE_PE00271 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984744.1"
/db_xref="GI:241666660"
/db_xref="GeneID:8022673"
/translation="MFLLLALLIGVIAGLRTMTAPAAVAWGAALGWFDVSQTPLAFMG
YQWTPWIFTLLAIVELIADQLPTTPSRKVPMQFGARIVSGALAGATIGAASSLLFGGL
IAGVIGAVIGTYGGATVRGRLAASFGKDLPAALIEDAVAVIGAVLIVGAVA"
sig_peptide 177385..177462
/locus_tag="Rleg_6743"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.998) with cleavage site probability 0.679 at
residue 26"
misc_feature 177430..177798
/locus_tag="Rleg_6743"
/note="Predicted membrane protein [Function unknown];
Region: COG3918"
/db_xref="CDD:33704"
gene 177843..179204
/locus_tag="Rleg_6744"
/db_xref="GeneID:8022674"
CDS 177843..179204
/locus_tag="Rleg_6744"
/inference="protein motif:PFAM:PF00070"
/note="Enables the enzymatic reduction of mercuric ions to
elemental mercury"
/codon_start=1
/transl_table=11
/product="mercuric reductase"
/protein_id="YP_002984745.1"
/db_xref="GI:241666661"
/db_xref="InterPro:IPR000103"
/db_xref="InterPro:IPR000815"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR004099"
/db_xref="InterPro:IPR012999"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:8022674"
/translation="MKSFDAIVIGAGQAGPFLAARMVEKGMKVALIERKFLGGTCVNA
GCMPTKTLVASARAAHVARNGATYGVNIPGEIAIDMKVVRARAETVTMNARNGLIGWF
AGMDGMTVIYGHARFEDPKTVSVNGETLTAPRIFLNVGARPVIPDLPGINDIDYLTST
SIIDLDSLPRHLAVIGGSYIGLEFAQMYRRFGAEISVIEHGPKLASREDEDISDAIAD
VLRSEGIDIHTGASEIAFSKSSDGITVATDSARIDASHVLIATGRKPNTDDLGLDAAG
VITDGRGFITVDDKLATNVDGIWALGDCNGHGAFTHTSYNDFEIAAANLLDSDDRKLS
SRILAYALYIDPPLGRVGMTEKQARASGHKILISTRPMSRVGRASERGETKGFMKVIA
DAETKKILGAAILGIEGDEVIHGIIDAMNAGTTYPALQWSVPIHPTVSELIPTLLGDL
KPV"
misc_feature 177843..179201
/locus_tag="Rleg_6744"
/note="mercuric reductase; Validated; Region: PRK06370"
/db_xref="CDD:180546"
misc_feature 177849..>177959
/locus_tag="Rleg_6744"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 178353..178577
/locus_tag="Rleg_6744"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:200974"
misc_feature 178857..179180
/locus_tag="Rleg_6744"
/note="Pyridine nucleotide-disulphide oxidoreductase,
dimerisation domain; Region: Pyr_redox_dim; pfam02852"
/db_xref="CDD:202431"
gene 179248..179817
/locus_tag="Rleg_6745"
/db_xref="GeneID:8022675"
CDS 179248..179817
/locus_tag="Rleg_6745"
/inference="protein motif:PFAM:PF09335"
/note="PFAM: hypothetical protein;
KEGG: rec:RHECIAT_PA0000214 hypothetical conserved
membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984746.1"
/db_xref="GI:241666662"
/db_xref="InterPro:IPR015414"
/db_xref="GeneID:8022675"
/translation="MSIELLIEHYGLLAIFLGAAFEGETAAFLGGVISHRGLLTYWSA
SLAATAGSFAGDQFWFFAGRYAARWGLVRRLMERPALARATRLLERYPTGFILAFRFL
VGLRTISPIVIGTTRIATGKFIILNAVAAFAWGQLFTALGYLFGHGIEQALGHLPLHR
HLLIAIGAAAVAAVAALVFRKMKLSARHS"
misc_feature 179254..179715
/locus_tag="Rleg_6745"
/note="Uncharacterized membrane-associated protein
[Function unknown]; Region: DedA; COG0586"
/db_xref="CDD:30931"
misc_feature 179371..179679
/locus_tag="Rleg_6745"
/note="SNARE associated Golgi protein; Region:
SNARE_assoc; pfam09335"
/db_xref="CDD:204201"
gene complement(179946..180989)
/locus_tag="Rleg_6746"
/db_xref="GeneID:8022676"
CDS complement(179946..180989)
/locus_tag="Rleg_6746"
/inference="protein motif:PFAM:PF08240"
/note="PFAM: alcohol dehydrogenase GroES domain protein;
alcohol dehydrogenase zinc-binding domain protein;
KEGG: rec:RHECIAT_PA0000213 probable xylitol dehydrogenase
protein"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase GroES domain protein"
/protein_id="YP_002984747.1"
/db_xref="GI:241666663"
/db_xref="InterPro:IPR002328"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:8022676"
/translation="MTKVRALVLERQHELALRDIDLPLETGPGEVKIRIHTVGVCGSD
VHYYTHGKIGPFIVNAPMVLGHEAAGTVVEVGAGVTHLKVGDRVCMEPGIPDPNSKAS
RLGMYNIDPAVTFWATPPIHGVLTPEVVHPANYTFKLPDNVSFAEGAMVEPFAVGMQA
ATKAKITPGDTAVVLGAGPIGTMVAIAALAGGCARAIVADLAQPKLDIAAQYQGVIPV
NIREKNLAEEVARLTDGWGADVVFECSGSPKAWETIMALPRPGGVIVVVGLPVNPIGF
DVSTASTKEIRIETVFRYAHQYERSIALLGSGRVDLKPLISETFKFEDSIKAFDRAVE
ARPSDVKLQIVMD"
misc_feature complement(179952..180977)
/locus_tag="Rleg_6746"
/note="Threonine dehydrogenase and related Zn-dependent
dehydrogenases [Amino acid transport and metabolism /
General function prediction only]; Region: Tdh; COG1063"
/db_xref="CDD:31263"
misc_feature complement(179952..180974)
/locus_tag="Rleg_6746"
/note="Sorbitol dehydrogenase; Region: sorbitol_DH;
cd05285"
/db_xref="CDD:176188"
misc_feature complement(order(180111..180116,180183..180185,
180534..180536,180636..180638,180645..180647,
180792..180794,180822..180824,180831..180833,
180849..180851,180861..180863,180867..180869))
/locus_tag="Rleg_6746"
/note="inhibitor binding site; inhibition site"
/db_xref="CDD:176188"
misc_feature complement(order(180534..180536,180789..180794,
180861..180863,180867..180869))
/locus_tag="Rleg_6746"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176188"
misc_feature complement(order(180660..180662,180684..180686,
180693..180695,180702..180704))
/locus_tag="Rleg_6746"
/note="structural Zn binding site [ion binding]; other
site"
/db_xref="CDD:176188"
misc_feature complement(order(180111..180119,180183..180191,
180249..180251,180255..180260,180330..180332,
180375..180377,180387..180395,180450..180458,
180522..180524))
/locus_tag="Rleg_6746"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:176188"
misc_feature complement(order(180069..180071,180078..180083,
180090..180092,180297..180299,180333..180335,
180381..180383,180408..180410,180414..180422,
180429..180431,180477..180479,180483..180485,
180516..180518))
/locus_tag="Rleg_6746"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176188"
gene 181639..183342
/locus_tag="Rleg_6747"
/db_xref="GeneID:8022677"
CDS 181639..183342
/locus_tag="Rleg_6747"
/EC_number="3.6.3.12"
/inference="protein motif:TFAM:TIGR00680"
/note="catalyzes the hydrolysis of ATP coupled with the
exchange of hydrogen and potassium ions"
/codon_start=1
/transl_table=11
/product="potassium-transporting ATPase subunit A"
/protein_id="YP_002984748.1"
/db_xref="GI:241666664"
/db_xref="InterPro:IPR004623"
/db_xref="GeneID:8022677"
/translation="MTLNGWLQILLYCGIVLVLVKPLGGYMTRVFSGERTFLSPVLVP
IERGLYRLAGTSEGEEQHWTSYAFAVLLFSLLGVIILYALQRLQGGLPYNPAGMAAVP
PELSFNTAVSFVSNTNWQNYGGESTMSYLTQMAGFTVQNFVSAATGIAIALAFIRAFS
RASGKVVGNFWVDMTRATFYVLLPICIVLTLVYVYLGVPQTLGAYVNATTLEGAQQTI
AVGPVASQLAIKMLGTNGGGFFNANSAHPFENPDAISNLIQMVSIFAIGAALTNVFGR
MVGNQRQGWAILATMGILFIVGVGVTYWAEAAGNPLMHAFGLGGGNMEGKEVRFGVAL
SSLFAVITTAASCGAVNAMHGSFTALGGLIPLINIQLGEVIVGGVGAGFYGILLFIIV
AVFVAGLMVGRTPEYLGKKIEAKEMKMAVLAILCLPLAMLVFTAIASVLPSAVASVGT
AGPHGFSEILYAYSSAAANNGSAFGGLTGNTPWYNITLGLGMLMGRFLVIIPALAIAG
SLIAKKSVPASAGTFPTDGPLFVGLLVGTILIVGGLTFFPALALGPVVEHLVMIAGQT
F"
misc_feature 181639..183327
/locus_tag="Rleg_6747"
/note="potassium-transporting ATPase subunit A;
Provisional; Region: PRK05482"
/db_xref="CDD:180116"
gene 183352..183507
/locus_tag="Rleg_6748"
/db_xref="GeneID:8022678"
CDS 183352..183507
/locus_tag="Rleg_6748"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984749.1"
/db_xref="GI:241666665"
/db_xref="GeneID:8022678"
/translation="MILRHRLRNAFHPRPGAPGRGNGPRPQASDVILVMMAGLLVIAA
IVKILQG"
gene 183552..185612
/locus_tag="Rleg_6749"
/db_xref="GeneID:8022679"
CDS 183552..185612
/locus_tag="Rleg_6749"
/inference="protein motif:TFAM:TIGR01497"
/note="One of the components of the high-affinity
ATP-driven potassium transport (or KDP) system, which
catalyzes the hydrolysis of ATP coupled with the exchange
of hydrogen and potassium ions"
/codon_start=1
/transl_table=11
/product="potassium-transporting ATPase subunit B"
/protein_id="YP_002984750.1"
/db_xref="GI:241666666"
/db_xref="InterPro:IPR000150"
/db_xref="InterPro:IPR001757"
/db_xref="InterPro:IPR002048"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006391"
/db_xref="InterPro:IPR008250"
/db_xref="GeneID:8022679"
/translation="MSQAKSASVMDSRILIPAVGAAFKKLNPWALARNPVMFVVATVS
VLTTVLFLRDLVAGNGNLGFSFQINLWLWFTVLFANFAEAVAEGRGKAQADSLRKART
ETQAKLLTGTDRTQFKLVPGTSLKVGDVVIVDAGDIIPSDGEVIEGVASVNEAAITGE
SAPVIRESGGDRSAVTGGTQVLSDWIRVRITAAAGSTFIDRMIALVEGAERQKTPNEI
ALNILLAGMTLIFVLATATIPSFAIYAGGSIPIIVLVALFVTLIPTTIGALLSAIGIA
GMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTITLGNRQATTFRPVRGVSEQDLAD
AAQLASLADETPEGRSIVVLAKEKYAIRGRDMASLKATFVPFTAQTRMSGVDLDGSSI
RKGAVDAVLAHVNGDASSKNGSEIVRELQSISDEVAKSGGTPLAVARDGRLLGVIQLK
DIVKGGIRERFTELRRMGIRTVMITGDNPLTAAAIAAEAGVDDFLAQATPEMKLALMR
EEQSKGKLVAMCGDGTNDAPALAQADVGVAMNTGTVAAREAGNMVDLDSDPTKLIEIV
EIGKQLLMTRGALTTFSIANDIAKYFAIIPAMFLTFYPQLGVLNIMGLSTPQSAILSA
IIFNALIIIALIPLSLKGVRYRPIGAGALLSRNLLIYGAGGIIVPFIGIKAIDMAVAA
LGLA"
misc_feature 183555..185609
/locus_tag="Rleg_6749"
/note="potassium-transporting ATPase subunit B;
Provisional; Region: PRK01122"
/db_xref="CDD:179229"
misc_feature 183765..184439
/locus_tag="Rleg_6749"
/note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
/db_xref="CDD:201018"
misc_feature 184827..185237
/locus_tag="Rleg_6749"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:212620"
gene 185646..186215
/locus_tag="Rleg_6750"
/db_xref="GeneID:8022680"
CDS 185646..186215
/locus_tag="Rleg_6750"
/EC_number="3.6.3.12"
/inference="protein motif:TFAM:TIGR00681"
/note="KEGG: rec:RHECIAT_PA0000209 potassium-transporting
ATPase protein, C chain;
TIGRFAM: potassium-transporting ATPase subunit C;
PFAM: K transporting ATPase KdpC subunit"
/codon_start=1
/transl_table=11
/product="potassium-transporting ATPase subunit C"
/protein_id="YP_002984751.1"
/db_xref="GI:241666667"
/db_xref="InterPro:IPR003820"
/db_xref="GeneID:8022680"
/translation="MLKELRPAVVMIVATTAITGLLYPLAMTGAAQALFPKQANGSLI
GNNGQVIGSMLIGQAFTSDKYFHGRPSAAGDGYNAAASSGSNLGPTSQKLIDRVKGDY
NAAKATNPNAEVPADLVTASGSGLDPHISPEAAYFQVARVAKARSLDEAKVKALVDGA
VEDRELGILGEPRVNVLALNQSLDASMTE"
misc_feature 185646..186203
/locus_tag="Rleg_6750"
/note="potassium-transporting ATPase subunit C;
Provisional; Region: PRK13999"
/db_xref="CDD:172500"
sig_peptide 185646..185747
/locus_tag="Rleg_6750"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.898) with cleavage site probability 0.643 at
residue 34"
gene 186328..189036
/locus_tag="Rleg_6751"
/db_xref="GeneID:8022681"
CDS 186328..189036
/locus_tag="Rleg_6751"
/inference="protein motif:PFAM:PF02702"
/note="PFAM: Osmosensitive K channel His kinase sensor;
ATP-binding region ATPase domain protein; UspA domain
protein; histidine kinase A domain protein;
SMART: ATP-binding region ATPase domain protein; histidine
kinase A domain protein;
KEGG: rec:RHECIAT_PA0000208 two-component sensor histidine
kinase protein (probably regulates osmosensitive potassium
channel)"
/codon_start=1
/transl_table=11
/product="Osmosensitive K channel His kinase sensor"
/protein_id="YP_002984752.1"
/db_xref="GI:241666668"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR003852"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR006016"
/db_xref="GeneID:8022681"
/translation="MPDDSRDQAGRPSPDALLEKARAETRGRLKIFLGAAPGVGKTYE
MLVSGRAKIADGLDVVIGVVETHDRKETEALIPGFEIIPRVEISYRGRALEEMDLDGI
LARRPDLVLVDELAHTNAEGSRHPKRYLDVKELLDRGIDVYTTLNIQHVESLNDVVSQ
ITRIRVRETVPDSIIDLADDIEIIDLTPDDLIKRLHDGKVYMPRTAERALTNYFTPGN
LTALRELALRKTAQRVDDQLLSHMQAHAISGPWAAGERVLVSVDHHSRSASLVRYAAR
MASRLRAPWAAVYIETNRSINLTEAERDTVAATLRLAEQLGGEAITLPGREVAEELVG
HATANNVTHIVIGAPKKPTWRDWWGRSITDELIRRAGEISVHVISGNEKDGTTARGVR
AAATPPPLDLGAYLLATGYVAIALAVGVVLDQVLDVRNLALVFLMAVLTSAVLHGLRP
ALYSCILSALSFNFFFLPPRYTLTISDPESVLALFFFLGVAIIASNLTATVQRQAAAA
RQRARTTEDLYLFSKKLAGTGTLDDVLWATAFQLASMLKVRVVLLLPEEGSIAVKAGY
PPDDTLDEADIAAARWAWEHNHAAGRGADTLPGAKRLYVPLRTGRTAVGVIGLDSDRR
DGPLLTPEQQRLLDALADQAALAIERVQLVADVDRARLGAEADRLRSALLTSISHDLK
TPLAAILGAAGTLRDYFASMPEEDRSDLLSTVVDESERLNRFIANLLDMTKIESGAME
PNSALHYAGDIVGSALRRAAKILDGHKTEMSIPADLPMVRVDPVLFEQVIFNLLDNAA
KYAPEQSVIHIEGWADADNVVVQISDEGPGIPPTDLTRVFDTFYRVRKGDQVRAGTGL
GLSICRGFIEAMGGTITAGNRTGRPGAVFTIRLPKPNDIPKVDELR"
misc_feature 186346..189027
/locus_tag="Rleg_6751"
/note="Osmosensitive K+ channel histidine kinase [Signal
transduction mechanisms]; Region: KdpD; COG2205"
/db_xref="CDD:32387"
misc_feature 186403..187029
/locus_tag="Rleg_6751"
/note="Osmosensitive K+ channel His kinase sensor domain;
Region: KdpD; pfam02702"
/db_xref="CDD:145711"
misc_feature 187093..187464
/locus_tag="Rleg_6751"
/note="USP domain is located between the N-terminal sensor
domain and C-terminal catalytic domain of this
Osmosensitive K+ channel histidine kinase family. The
family of KdpD sensor kinase proteins regulates the
kdpFABC operon responsible for potassium...; Region:
USP_OKCHK; cd01987"
/db_xref="CDD:30174"
misc_feature order(187105..187113,187195..187197,187363..187368,
187372..187377,187405..187416)
/locus_tag="Rleg_6751"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30174"
misc_feature 187537..187818
/locus_tag="Rleg_6751"
/note="Domain of unknown function (DUF4118); Region:
DUF4118; pfam13493"
/db_xref="CDD:205671"
misc_feature 187915..188202
/locus_tag="Rleg_6751"
/note="GAF domain; Region: GAF_3; pfam13492"
/db_xref="CDD:205670"
misc_feature 188326..188526
/locus_tag="Rleg_6751"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(188344..188346,188356..188358,188368..188370,
188377..188379,188389..188391,188398..188400,
188455..188457,188467..188469,188476..188478,
188488..188490,188497..188499,188509..188511)
/locus_tag="Rleg_6751"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 188362..188364
/locus_tag="Rleg_6751"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 188683..188994
/locus_tag="Rleg_6751"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(188701..188703,188713..188715,188722..188724,
188791..188793,188797..188799,188803..188805,
188809..188814,188890..188901,188947..188949,
188953..188955,188971..188976,188980..188982)
/locus_tag="Rleg_6751"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 188713..188715
/locus_tag="Rleg_6751"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(188803..188805,188809..188811,188890..188892,
188896..188898)
/locus_tag="Rleg_6751"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 189033..189725
/locus_tag="Rleg_6752"
/db_xref="GeneID:8022682"
CDS 189033..189725
/locus_tag="Rleg_6752"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; transcriptional
regulator domain protein;
SMART: response regulator receiver;
KEGG: ret:RHE_PE00262 two-component response regulator"
/codon_start=1
/transl_table=11
/product="two component transcriptional regulator, winged
helix family"
/protein_id="YP_002984753.1"
/db_xref="GI:241666669"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:8022682"
/translation="MTGSAVKILVVDDEPPIRKLLRVGLTAQGYEVREAPNAAAARQS
VADDMPDLIVLDLGLPDTSGHDLLQVWRDEGLSMPVVILSSRTDEAGIVKALESGADD
YVTKPFGINELGARIRVALRHRLQQQGEKAIFQTGGLSIDLVKRIVKVEGAEIKLSPK
EYDILRVLAQHAGKVLTHQFLLKQVWGPAADVQYLRVYVRQLRQKVEQIPDQPHYITT
ETGVGYRLREPD"
misc_feature 189051..189722
/locus_tag="Rleg_6752"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature 189057..189395
/locus_tag="Rleg_6752"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(189066..189071,189198..189200,189222..189224,
189282..189284,189339..189341,189348..189353)
/locus_tag="Rleg_6752"
/note="active site"
/db_xref="CDD:29071"
misc_feature 189198..189200
/locus_tag="Rleg_6752"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(189207..189212,189216..189224)
/locus_tag="Rleg_6752"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 189348..189356
/locus_tag="Rleg_6752"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 189432..189710
/locus_tag="Rleg_6752"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature order(189504..189506,189561..189566,189612..189614,
189621..189623,189645..189650,189684..189686,
189699..189701)
/locus_tag="Rleg_6752"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 189722..190282
/locus_tag="Rleg_6753"
/db_xref="GeneID:8022683"
CDS 189722..190282
/locus_tag="Rleg_6753"
/inference="protein motif:PFAM:PF00359"
/note="PFAM: phosphoenolpyruvate-dependent sugar
phosphotransferase system EIIA 2;
KEGG: rec:RHECIAT_PA0000206 putative PTS system, regulator
protein"
/codon_start=1
/transl_table=11
/product="putative PTS IIA-like nitrogen-regulatory
protein PtsN"
/protein_id="YP_002984754.1"
/db_xref="GI:241666670"
/db_xref="InterPro:IPR002178"
/db_xref="GeneID:8022683"
/translation="MNSLPSRCRNTIEPNSIEPNSIEPNSIEPNSIENDMNLPNIIRP
EHTFIGVSAPTKWRALQTIADKAAKAFSVDGQTILKALEAREKLGSTGIGNGIAIPHA
AIDGMTSPRGLLLRFAHPLDFEAIDDIPTDIAFVLLFGENNRGEYLNVLSAIARRLQS
DGTLVAMRKARTVDEYYSDFIADSRV"
misc_feature 189845..190255
/locus_tag="Rleg_6753"
/note="PTS_IIA, PTS system, fructose/mannitol specific IIA
subunit. The bacterial phosphoenolpyruvate: sugar
phosphotransferase system (PTS) is a multi-protein system
involved in the regulation of a variety of metabolic and
transcriptional processes. This...; Region: PTS_IIA_fru;
cd00211"
/db_xref="CDD:29266"
misc_feature order(189974..189976,190022..190024)
/locus_tag="Rleg_6753"
/note="active site"
/db_xref="CDD:29266"
misc_feature 190022..190024
/locus_tag="Rleg_6753"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29266"
gene complement(190397..191413)
/locus_tag="Rleg_6754"
/db_xref="GeneID:8022684"
CDS complement(190397..191413)
/locus_tag="Rleg_6754"
/inference="protein motif:PFAM:PF02530"
/note="PFAM: porin;
KEGG: rec:RHECIAT_PA0000205 porin outer membrane protein"
/codon_start=1
/transl_table=11
/product="porin"
/protein_id="YP_002984755.1"
/db_xref="GI:241666671"
/db_xref="InterPro:IPR003684"
/db_xref="GeneID:8022684"
/translation="MNIRTILFASVAALAAASGARAADAIVAAEPEPVEYVRVCDAYG
TGYFYIPGTETCLSIGGYIRTEVRFGQQISGDSDVDFWTRGQVTFQTKNDTEYGTLTG
VITLRYNADDASDQEALLDEGYLDIAGFRAGKLYSWWDDDMSGETDTLASNETTHNSI
RYQYENGAFAAGISVDELEEVYATKPGDGPNNFGVAGQVSYKAGAISAYLLAGYDTDT
SEVAVRGIVYADIGPGTLGIAGVWASGANYYYEESEWTIAAEYALKINDKWSVTPGFQ
YFENIALEADGNGFTGGSAYTTGVTIDYQIVEDLRSKLSVQYHDEDEGDDEVFGFLRF
QRDF"
sig_peptide complement(191345..191413)
/locus_tag="Rleg_6754"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.982 at
residue 23"
misc_feature complement(190460..191326)
/locus_tag="Rleg_6754"
/note="Porin subfamily; Region: Porin_2; pfam02530"
/db_xref="CDD:190338"
gene 191774..192799
/locus_tag="Rleg_6755"
/db_xref="GeneID:8022685"
CDS 191774..192799
/locus_tag="Rleg_6755"
/inference="protein motif:TFAM:TIGR00971"
/note="TIGRFAM: sulfate ABC transporter periplasmic
sulfate-binding protein;
PFAM: extracellular solute-binding protein family 1;
KEGG: ret:RHE_PE00259 sulfate uptake ABC transporter,
substrate-binding protein"
/codon_start=1
/transl_table=11
/product="sulfate ABC transporter periplasmic
sulfate-binding protein"
/protein_id="YP_002984756.1"
/db_xref="GI:241666672"
/db_xref="InterPro:IPR000957"
/db_xref="InterPro:IPR005669"
/db_xref="InterPro:IPR006059"
/db_xref="GeneID:8022685"
/translation="MQTQRLTRLIAAAVMAGSFAIGSIAPAFADQTLLNVSYDPTREL
YKDFNAAFAAKWQKDNGETLTIQASHGGSGAQARSVIDGLDADVVTLALEGDIDAIAK
ATGKIPADWKTKFPNNSTPYTSTIVFLVRKGNPKGIKDWGDLVKDDVQVITPNPKTSG
GARWNFLAAWAWAKQSNGGDEAKAQEYVAKLLQHVPVLDTGARGATTTFVQRGLGDVL
LAWENEAYLSLEELGPDQFEIVTPTFSIRADPPVAVVDGNVDKKGTRKVAEAYLNYLY
SDEGQKIAAKHYYRPTKPEAADPADIARFPKLTLATIDDFGGWKDAQPKFFGDGGVFD
QIYKPAQ"
sig_peptide 191774..191863
/locus_tag="Rleg_6755"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 30"
misc_feature 191789..192796
/locus_tag="Rleg_6755"
/note="ABC-type sulfate transport system, periplasmic
component [Inorganic ion transport and metabolism];
Region: Sbp; COG1613"
/db_xref="CDD:31801"
misc_feature 191930..192643
/locus_tag="Rleg_6755"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_11; pfam13531"
/db_xref="CDD:205709"
gene 192808..193665
/locus_tag="Rleg_6756"
/db_xref="GeneID:8022686"
CDS 192808..193665
/locus_tag="Rleg_6756"
/inference="protein motif:TFAM:TIGR02139"
/note="TIGRFAM: sulfate ABC transporter, inner membrane
subunit CysT; sulfate ABC transporter, inner membrane
subunit;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: rec:RHECIAT_PA0000203 putative sulfate uptake ABC
transporter, permease protein"
/codon_start=1
/transl_table=11
/product="sulfate ABC transporter, inner membrane subunit
CysT"
/protein_id="YP_002984757.1"
/db_xref="GI:241666673"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR005667"
/db_xref="InterPro:IPR011865"
/db_xref="GeneID:8022686"
/translation="MKAHSPTRWRFKRPSVIPGFGMALGFTLTWLTLLILIPLSGLAV
RSSALGWEKFWSIALDPRTLNALRISFGSAFIAAIVNAVFGIILAWVLVRYRFPGKRI
IDAMVDLPFALPTAVAGIALTTLYAPNGWIGQFLTPLGIKIAFTPTGIVVALIFVGLP
FVVRTVQPVMEEIDKEVEEAAATLGANRFQTIFRVLLPGLAPAVLTGFALAFARGVGE
YGSVIFIAGNLPFKSEIAPLLIIIKLEEYNYAAATGIAAIMLIISFAMLLVINLIQSW
SRRRYGYGA"
sig_peptide 192808..192939
/locus_tag="Rleg_6756"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.893) with cleavage site probability 0.495 at
residue 44"
misc_feature 192841..193653
/locus_tag="Rleg_6756"
/note="ABC-type sulfate transport system, permease
component [Posttranslational modification, protein
turnover, chaperones]; Region: CysU; COG0555"
/db_xref="CDD:30901"
misc_feature 193006..193599
/locus_tag="Rleg_6756"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(193054..193059,193066..193071,193084..193086,
193114..193125,193129..193158,193165..193170,
193174..193176,193273..193278,193282..193284,
193288..193290,193297..193302,193306..193308,
193318..193323,193330..193332,193381..193383,
193423..193428,193435..193437,193456..193467,
193474..193479,193516..193521,193549..193554,
193561..193566,193570..193575,193582..193587,
193594..193599)
/locus_tag="Rleg_6756"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(193132..193176,193456..193473)
/locus_tag="Rleg_6756"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(193174..193176,193258..193260,193474..193476,
193510..193512,193519..193521,193549..193551)
/locus_tag="Rleg_6756"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(193333..193371,193387..193392,193402..193404)
/locus_tag="Rleg_6756"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 193655..194527
/locus_tag="Rleg_6757"
/db_xref="GeneID:8022687"
CDS 193655..194527
/locus_tag="Rleg_6757"
/inference="protein motif:TFAM:TIGR02140"
/note="TIGRFAM: sulfate ABC transporter, inner membrane
subunit CysW; sulfate ABC transporter, inner membrane
subunit;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: ret:RHE_PE00257 sulfate uptake ABC transporter,
permease protein"
/codon_start=1
/transl_table=11
/product="sulfate ABC transporter, inner membrane subunit
CysW"
/protein_id="YP_002984758.1"
/db_xref="GI:241666674"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR005667"
/db_xref="InterPro:IPR011866"
/db_xref="GeneID:8022687"
/translation="MALDATAQPTKLRSVTTENRIARFSLIILSLVFLLLILLLPLAA
VFVEAFRKGAGPFLQALADAETFSAIRLTLIVAGVSVPLNLVFGVAAAWAIAKFEFKG
KAFLTTLIDLPFSVSPVISGLVFVLLFGANTWLGQWFSAHDIKILFAVPGLILATMFV
TFPFVARELIPLMQEQGTADEEAALSLGASGWQTFWHVTLPNIKWGLLYGVLLCNARA
MGEFGAVSVVSGHIRGQTNTMPLQVEILYNEYNFTGAFAVATLLALLALVTLVLKTLL
EMRYSAEIAASRRH"
sig_peptide 193655..193786
/locus_tag="Rleg_6757"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.728) with cleavage site probability 0.396 at
residue 44"
misc_feature 193862..194410
/locus_tag="Rleg_6757"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(193910..193915,193922..193927,193940..193942,
193970..193981,193985..194014,194021..194026,
194030..194032,194129..194134,194138..194140,
194144..194146,194153..194158,194162..194164,
194174..194179,194186..194188,194237..194239,
194279..194284,194291..194293,194312..194323,
194330..194335,194372..194377,194405..194410)
/locus_tag="Rleg_6757"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(193988..194032,194312..194329)
/locus_tag="Rleg_6757"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(194030..194032,194111..194113,194330..194332,
194366..194368,194375..194377,194405..194407)
/locus_tag="Rleg_6757"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(194189..194227,194243..194248,194258..194260)
/locus_tag="Rleg_6757"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 194538..195578
/locus_tag="Rleg_6758"
/db_xref="GeneID:8022688"
CDS 194538..195578
/locus_tag="Rleg_6758"
/inference="protein motif:TFAM:TIGR00968"
/note="KEGG: rec:RHECIAT_PA0000201 probable sulfate uptake
ABC transporter, ATP-binding protein;
TIGRFAM: sulfate ABC transporter ATPase;
PFAM: ABC transporter;
SMART: AAA ATPase"
/codon_start=1
/transl_table=11
/product="sulfate ABC transporter ATPase"
/protein_id="YP_002984759.1"
/db_xref="GI:241666675"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005666"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022688"
/translation="MEVRVQNIRKEFDRFPALHDVSLDIRSGELIALLGPSGSGKTTL
LRLIAGLESPTEGLIFFGDEDASKKSVQQRNIGFVFQHYALFRYMTVLENVSFGLKVR
NSARRPPKADIRRRALELLDLVQLSGLEKRYPAQLSGGQRQRVALARAMAVEPNVLLL
DEPFGALDAQVRKDLRKWLRDIHDRTGHTTVFVTHDQDEALELADRVVVMSQGAIEQV
GTPDQVYDNPNSPFVFGFIGQSNCLQVEISDGDIRFEGRSLGLNAEGEPDGTAQLYFR
PHDVRLCESAENCIAGQPVSSRRVAGTRHIELDIGNDRPHIEIELPPSEADRLDRNRV
AFKPTRWKLFRS"
misc_feature 194538..195575
/locus_tag="Rleg_6758"
/note="ABC-type sulfate/molybdate transport systems,
ATPase component [Inorganic ion transport and metabolism];
Region: CysA; COG1118"
/db_xref="CDD:31315"
misc_feature 194538..195254
/locus_tag="Rleg_6758"
/note="ATP-binding cassette domain of the sulfate
transporter; Region: ABC_CysA_sulfate_importer; cd03296"
/db_xref="CDD:213263"
misc_feature 194640..194663
/locus_tag="Rleg_6758"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213263"
misc_feature order(194649..194654,194658..194666,194778..194780,
195018..195023,195120..195122)
/locus_tag="Rleg_6758"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213263"
misc_feature 194769..194780
/locus_tag="Rleg_6758"
/note="Q-loop/lid; other site"
/db_xref="CDD:213263"
misc_feature 194946..194975
/locus_tag="Rleg_6758"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213263"
misc_feature 195006..195023
/locus_tag="Rleg_6758"
/note="Walker B; other site"
/db_xref="CDD:213263"
misc_feature 195030..195041
/locus_tag="Rleg_6758"
/note="D-loop; other site"
/db_xref="CDD:213263"
misc_feature 195108..195128
/locus_tag="Rleg_6758"
/note="H-loop/switch region; other site"
/db_xref="CDD:213263"
misc_feature 195387..195554
/locus_tag="Rleg_6758"
/note="TOBE-like domain; Region: TOBE_3; pfam12857"
/db_xref="CDD:205111"
gene 195800..196636
/locus_tag="Rleg_6759"
/db_xref="GeneID:8022689"
CDS 195800..196636
/locus_tag="Rleg_6759"
/inference="protein motif:PFAM:PF07486"
/note="PFAM: cell wall hydrolase SleB;
KEGG: ret:RHE_PE00255 putative cell wall-associated
hydrolase protein"
/codon_start=1
/transl_table=11
/product="cell wall hydrolase SleB"
/protein_id="YP_002984760.1"
/db_xref="GI:241666676"
/db_xref="InterPro:IPR002114"
/db_xref="InterPro:IPR011105"
/db_xref="GeneID:8022689"
/translation="MRAEISFGKSLIGILFVGLAAASCTTTSKPAATAANTKTKPGQA
AKVTFNYTAKDRECLQRAMYFESLHSDKDGYMAVGTVVMNRLTSGAYPTSICGVVAQK
RQFAPGVMTREVKPQAETELASAADAILVKGARHPAVKDAMFFHTDGLKFPYDNMHYV
TVAGGNAFYEKRDSNGMLETPPPLPSYEVAMNYVPGESMLPPQFEALIPSAVPVPLPA
PDPMATASTGQMRITAPVTAPETSPLTSVEPEPGMPIAIPIPRPAYDSVMLRESLPAN
GG"
sig_peptide 195800..195901
/locus_tag="Rleg_6759"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.968) with cleavage site probability 0.378 at
residue 34"
misc_feature 196016..196309
/locus_tag="Rleg_6759"
/note="Cell Wall Hydrolase; Region: Hydrolase_2;
pfam07486"
/db_xref="CDD:203645"
gene complement(196692..197924)
/locus_tag="Rleg_6760"
/db_xref="GeneID:8022690"
CDS complement(196692..197924)
/locus_tag="Rleg_6760"
/EC_number="3.4.11.4"
/inference="protein motif:TFAM:TIGR01882"
/note="catalyzes the release of the N-terminal amino acid
from a tripeptide"
/codon_start=1
/transl_table=11
/product="peptidase T"
/protein_id="YP_002984761.1"
/db_xref="GI:241666677"
/db_xref="InterPro:IPR001261"
/db_xref="InterPro:IPR002933"
/db_xref="InterPro:IPR010161"
/db_xref="InterPro:IPR011650"
/db_xref="GeneID:8022690"
/translation="MTDTVLDRFLRYVVIDTQSDPASSTQPTTGKQKDLGRVLVDELL
KIGLADAHLDEHGYVYATIPANSDKTVPVICFCSHMDTAPDFSGTNIKPQIIRNFAGG
DIKLAGDTGRVIRVSDHPELQNQIGNDIVTTDGTTLLGADDKAGLAEIMTAAQILVGN
PDIRHGTIKILFTPDEEVGRGVNKVDLKKLGADFAYTMDGETAGHIEDETFSADGVEI
SISGVAIHPGFAKGRMENAIKIAGAIIDRLPGDIAPETTEGQQGFIHPTGVTGSMEKA
SLSFIIRDFTDKGLTEKESMLEGIVKDVMAVYPGSTYHFEVKEQYRNMKVVLDRHPEI
VDNAIEAVRRAGMTPVRGSIRGGTDGSRLSFMGLPCPNIFAGGHAFHSPLEWVSRQDM
EKAVKTIVELARVWEERA"
misc_feature complement(196695..197912)
/locus_tag="Rleg_6760"
/note="peptidase T; Region: peptidase-T; TIGR01882"
/db_xref="CDD:130937"
misc_feature complement(196710..197912)
/locus_tag="Rleg_6760"
/note="M20 Peptidase T specifically cleaves tripeptides;
Region: M20_peptT; cd03892"
/db_xref="CDD:193512"
misc_feature complement(order(196782..196784,197328..197330,
197394..197399,197499..197501,197688..197690))
/locus_tag="Rleg_6760"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193512"
misc_feature complement(order(196782..196784,196860..196862,
197106..197132,197136..197138,197151..197165,
197190..197192,197199..197201,197208..197213,
197217..197219,197223..197225,197229..197237,
197241..197249,197670..197672))
/locus_tag="Rleg_6760"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:193512"
gene complement(198029..198781)
/locus_tag="Rleg_6761"
/db_xref="GeneID:8022691"
CDS complement(198029..198781)
/locus_tag="Rleg_6761"
/inference="protein motif:PFAM:PF00149"
/note="PFAM: metallophosphoesterase;
KEGG: esa:ESA_pESA3p05456 hypothetical protein"
/codon_start=1
/transl_table=11
/product="metallophosphoesterase"
/protein_id="YP_002984762.1"
/db_xref="GI:241666678"
/db_xref="InterPro:IPR004843"
/db_xref="GeneID:8022691"
/translation="MLVAQISDIHAGPDLSSLRTLERAIGWLKTFRPDVLVVTGDLVN
DQWRHGYRLVAENLRSLDCPVHLLPGNGDDVQLMRSELVAVGTWINATGPMHFRTAVD
GLTLFGVDVTVAGQSYGDVLPHLPWLTSALADVTTPSLLFMHQPPLRIGIEVLDQVGC
RNGSALLSTLETMHRLPLAILCGHVHRPAFGRLGSMTVQTCGSLCPPNPLLLDGRADL
SVIDAPSFLMHEVSDGRLVSHVVSVPISDRGA"
misc_feature complement(198092..198778)
/locus_tag="Rleg_6761"
/note="Enterobacter aerogenes GpdQ and related proteins,
metallophosphatase domain; Region: MPP_GpdQ; cd07402"
/db_xref="CDD:163645"
misc_feature complement(198218..198775)
/locus_tag="Rleg_6761"
/note="Calcineurin-like phosphoesterase; Region:
Metallophos; pfam00149"
/db_xref="CDD:201036"
misc_feature complement(order(198164..198166,198224..198226,
198230..198232,198350..198352,198566..198571,
198650..198652,198659..198661,198752..198754,
198758..198760))
/locus_tag="Rleg_6761"
/note="active site"
/db_xref="CDD:163645"
misc_feature complement(order(198224..198226,198230..198232,
198350..198352,198569..198571,198659..198661,
198752..198754,198758..198760))
/locus_tag="Rleg_6761"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163645"
misc_feature complement(order(198092..198094,198101..198103,
198185..198187,198191..198199,198206..198220,
198239..198241,198245..198247,198329..198334,
198338..198340,198614..198616,198641..198643,
198650..198652,198701..198706,198713..198718,
198725..198727,198734..198736))
/locus_tag="Rleg_6761"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:163645"
gene complement(198852..199910)
/locus_tag="Rleg_6762"
/db_xref="GeneID:8022692"
CDS complement(198852..199910)
/locus_tag="Rleg_6762"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter; Transport-associated OB
domain protein;
SMART: AAA ATPase;
KEGG: ret:RHE_PE00248 sugar ABC transporter, ATP-binding
protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984763.1"
/db_xref="GI:241666679"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013611"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022692"
/translation="MASIDIRNIRKAYGHVQVLHGVNLEIQDGEFVVLVGPSGCGKST
LLRMIAGLEEVTSGEIRIAGNRVNELHPKDRDIAMVFQSYALYPHMNVAGNMSYSLRL
RKVAKEKIAGAVAAAAAKLGLDPLLERRPKALSGGQRQRVAMGRAIVRQPKAFLFDEP
LSNLDARLREQMRAEIKKLHGDLKATSIYVTHDQIEAMTLADRIVAMHGGVVQQVGSP
LELYDRPANLFVAGFIGSPGMNFLEATYDADGVKLKDGTIVPLAKPLPLSDGAKVTLG
IRPEHVLMSDGGAGLAADVELVEPTGFGIILHLALHGLPFKIFTLNREALKAGPKVNV
AFPAQYLHVFDGEGKRVD"
misc_feature complement(198855..199910)
/locus_tag="Rleg_6762"
/note="glycerol-3-phosphate transporter ATP-binding
subunit; Provisional; Region: ugpC; PRK11650"
/db_xref="CDD:183258"
misc_feature complement(199263..199901)
/locus_tag="Rleg_6762"
/note="The N-terminal ATPase domain of the maltose
transporter, MalK. ATP binding cassette (ABC) proteins
function from bacteria to human, mediating the
translocation of substances into and out of cells or
organelles. ABC transporters contain two...; Region:
ABC_MalK_N; cd03301"
/db_xref="CDD:73060"
misc_feature complement(199782..199805)
/locus_tag="Rleg_6762"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(order(199335..199337,199434..199439,
199665..199667,199779..199787,199791..199796))
/locus_tag="Rleg_6762"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73060"
misc_feature complement(199665..199676)
/locus_tag="Rleg_6762"
/note="Q-loop/lid; other site"
/db_xref="CDD:73060"
misc_feature complement(199482..199511)
/locus_tag="Rleg_6762"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73060"
misc_feature complement(199434..199451)
/locus_tag="Rleg_6762"
/note="Walker B; other site"
/db_xref="CDD:73060"
misc_feature complement(199416..199427)
/locus_tag="Rleg_6762"
/note="D-loop; other site"
/db_xref="CDD:73060"
misc_feature complement(199329..199349)
/locus_tag="Rleg_6762"
/note="H-loop/switch region; other site"
/db_xref="CDD:73060"
misc_feature complement(198879..199088)
/locus_tag="Rleg_6762"
/note="TOBE domain; Region: TOBE_2; pfam08402"
/db_xref="CDD:203932"
gene complement(199915..200745)
/locus_tag="Rleg_6763"
/db_xref="GeneID:8022693"
CDS complement(199915..200745)
/locus_tag="Rleg_6763"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: ret:RHE_PE00247 sugar ABC transporter, permease
protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984764.1"
/db_xref="GI:241666680"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR010916"
/db_xref="GeneID:8022693"
/translation="MRRSVIPTIAHRLAILCYIAFALFPLFWLLKVSVTPNDLLYSEG
VRMWPSRTTWDHYAFVLRHSAFPTFFKNSLIVSASTAITVTICASLSGYALSRFNFRA
KYWIVALMLLTQMFPLVMLVAPIFKILSPLHLTNSLTGLVIVYTAFNVPFATFLMQSF
FDGIPRDLEEAAKIDGATQFTAFRQIILPLTLPGIAATLGFVFTAAWSELLFALMLIN
GNDAATFPVGLLTFVSKFSVDFGQMMAAGVMALIPAGLFFLLIQRYLVQGLTAGAVKG
"
misc_feature complement(199921..200742)
/locus_tag="Rleg_6763"
/note="ABC-type sugar transport system, permease component
[Carbohydrate transport and metabolism]; Region: UgpE;
COG0395"
/db_xref="CDD:30744"
misc_feature complement(199990..200538)
/locus_tag="Rleg_6763"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(199996..200001,200005..200010,
200017..200022,200050..200055,200101..200106,
200113..200124,200143..200145,200152..200157,
200197..200199,200248..200250,200257..200262,
200272..200274,200278..200283,200290..200292,
200296..200298,200302..200307,200368..200370,
200374..200379,200386..200415,200419..200430,
200458..200460,200473..200478,200485..200490))
/locus_tag="Rleg_6763"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(200107..200124,200368..200412))
/locus_tag="Rleg_6763"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(200020..200022,200050..200052,
200059..200061,200104..200106,200320..200322,
200368..200370))
/locus_tag="Rleg_6763"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(200176..200178,200188..200193,
200209..200247))
/locus_tag="Rleg_6763"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(200750..201730)
/locus_tag="Rleg_6764"
/db_xref="GeneID:8022694"
CDS complement(200750..201730)
/locus_tag="Rleg_6764"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: rec:RHECIAT_PA0000191 probable sugar ABC
transporter, permease protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984765.1"
/db_xref="GI:241666681"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022694"
/translation="MTQTAQNAANGTFWLMTISADTLDMRRDRRPWLRRVADASEPYL
YSAPSLILIIAVMLVPLTVGISYAFRDIQLLNPFSGGFIGLDHFRELSGDAAFYGALR
NTLWWTGASVVLQFVFGLILALLLDKPFKGRAIAQALVFLPWAVPSFLAGLNWAWLFN
PVIGPIPHWLFALGLMHEPGNILSDPNYAMWGPIVANVWWGIPFFAITLLAALQAIPR
DLYEAASIDGAGWFQRFRSITLPFLAPTIAITVLLRTVWISNFADLIVVMTNGGPADR
TQIVASYIFTTAFRRLDFGYASAIALVLLVLLLAYSMLIILLRQTLLNKD"
misc_feature complement(200912..201430)
/locus_tag="Rleg_6764"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(200930..200935,200942..200953,
200972..200974,200981..200986,201026..201028,
201077..201079,201086..201091,201101..201103,
201107..201112,201119..201121,201125..201127,
201134..201139,201263..201265,201269..201274,
201281..201310,201314..201325,201350..201352,
201365..201370,201377..201382))
/locus_tag="Rleg_6764"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(200936..200953,201263..201307))
/locus_tag="Rleg_6764"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(200933..200935,201152..201154,
201263..201265))
/locus_tag="Rleg_6764"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(201005..201007,201017..201022,
201038..201076))
/locus_tag="Rleg_6764"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(201781..203040)
/locus_tag="Rleg_6765"
/db_xref="GeneID:8022695"
CDS complement(201781..203040)
/locus_tag="Rleg_6765"
/inference="protein motif:PFAM:PF01547"
/note="PFAM: extracellular solute-binding protein family
1;
KEGG: rec:RHECIAT_PA0000190 putative sugar ABC
transporter, substrate-binding protein"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 1"
/protein_id="YP_002984766.1"
/db_xref="GI:241666682"
/db_xref="InterPro:IPR006059"
/db_xref="GeneID:8022695"
/translation="MKKLIISTIFASMMAGTAFADTTLKLVEVITSPERTETLKSIVG
KFEAANPGTKVDIISLPWNEAFQKFATMVSAGDVPDVMEMPDTWLSLYANNGMLESLE
PYLAKWEHTKELTPRALELGRDVKNTAYMLPYGFYLRAMFYNKKLLAEAGVAAPPKTM
EEFTAASEKVSKLSGKYGYCMRGGAGGLNGWMIFAASMAGSNKYFNDDGTSTMNSPGW
AKGIEWMVDLYKKGYAPKDSVNWGFNEVVAGFYSGTCAFLDQDPDALIAIAERMKKED
FGVMPLPKGPDGKSFPTIGYGGWSMFTTSGNKDLSWKLIATLEGPEGNIEWNKRIGAL
PAYTAAEKDPFYAGDQFKGWFEELADPNTVPTVMPTYLEEFAFFKDSLAIKTSQQAML
GDISAKDLADQWAEYLTKAQQKFLAKK"
sig_peptide complement(202978..203040)
/locus_tag="Rleg_6765"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 21"
misc_feature complement(201796..203031)
/locus_tag="Rleg_6765"
/note="ABC-type sugar transport system, periplasmic
component [Carbohydrate transport and metabolism]; Region:
UgpB; COG1653"
/db_xref="CDD:31839"
misc_feature complement(202066..202950)
/locus_tag="Rleg_6765"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_1; pfam01547"
/db_xref="CDD:201851"
gene complement(203076..204248)
/locus_tag="Rleg_6766"
/db_xref="GeneID:8022696"
CDS complement(203076..204248)
/locus_tag="Rleg_6766"
/inference="protein motif:PRIAM:4.4.1.8"
/note="PFAM: Cys/Met metabolism
pyridoxal-phosphate-dependent protein; aromatic amino acid
beta-eliminating lyase/threonine aldolase;
KEGG: ret:RHE_PE00244 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984767.1"
/db_xref="GI:241666683"
/db_xref="InterPro:IPR000277"
/db_xref="InterPro:IPR001597"
/db_xref="GeneID:8022696"
/translation="MSNGSEPFDLASLITAHDEGNFADAVVPPIFQTSLFTFSDYDDM
IASYRGERVRPIYTRGLNPTVRAFEEMLAKLEGAEDALGFASGMAAISSAVLSFVEPG
DRIVAVKHVYPDAFRLFGTILKRMKIEVTYVDGRDEEAVAKALPGAKLFYMESPTSWV
MEAHDVGALAALAQQHGAISMIDNSWASPFFQRPLTLGVDLVIHSASKYLGGHSDVVA
GVIAGSTAMIARVKAEAYPYLGGKLSPFDAWLLIRGLRTLPLRMKAHEASALEIARRL
QKLGVVETVCHPGLANRLPTGLIGTSGLFSFIFRDGVDIRAFADHLKLFKLGVSWGGH
ESLIVPGEVVLQQKAQPNSAHAFGIHARSVRLHVGLEGTEALWRDIEEALAAASQS"
misc_feature complement(203082..204248)
/locus_tag="Rleg_6766"
/note="hypothetical protein; Provisional; Region:
PRK05968"
/db_xref="CDD:168320"
misc_feature complement(203094..204179)
/locus_tag="Rleg_6766"
/note="CGS_like: Cystathionine gamma-synthase is a PLP
dependent enzyme and catalyzes the committed step of
methionine biosynthesis. This pathway is unique to
microorganisms and plants, rendering the enzyme an
attractive target for the development of...; Region:
CGS_like; cd00614"
/db_xref="CDD:99738"
misc_feature complement(order(203289..203291,203508..203513,
203517..203519,203550..203552,203598..203600,
203604..203606,203628..203630,203889..203891,
203898..203900,203913..203915,203982..203987,
203991..203996,204072..204074,204078..204080,
204135..204140,204144..204155))
/locus_tag="Rleg_6766"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99738"
misc_feature complement(order(203598..203600,203625..203630,
203634..203636,203700..203702,203787..203789,
203913..203915,203985..203993))
/locus_tag="Rleg_6766"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:99738"
misc_feature complement(order(203625..203630,203634..203636,
203691..203693,203700..203702,203913..203915,
203985..203993))
/locus_tag="Rleg_6766"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99738"
misc_feature complement(203625..203627)
/locus_tag="Rleg_6766"
/note="catalytic residue [active]"
/db_xref="CDD:99738"
gene complement(204245..204967)
/locus_tag="Rleg_6767"
/db_xref="GeneID:8022697"
CDS complement(204245..204967)
/locus_tag="Rleg_6767"
/inference="protein motif:PFAM:PF07729"
/note="PFAM: GntR family transcriptional regulator;
regulatory protein GntR HTH;
SMART: regulatory protein GntR HTH;
KEGG: rec:RHECIAT_PA0000188 probable transcriptional
regulator protein, GntR family"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_002984768.1"
/db_xref="GI:241666684"
/db_xref="InterPro:IPR000524"
/db_xref="InterPro:IPR011711"
/db_xref="GeneID:8022697"
/translation="MKANSSDRPVIRPLPVMDRARQVTDALADYVEEARLKAGDRLPA
ERELMAALAVGRSTIREAIRHFQALGVIETRKGSGTYLLKPVSRATIHMPLSFDTVHL
RDVLLQTLEVRRGIECEAGMVAARRRTNTDLVVIEEKLDAMERVHLEKGTSGPEDLAF
HLAVYDATHNPLFRQLLEQMRETFERFWEHPFDRQDFARRSFPFHRTLFDAIAAGDPE
AARAETLKILDIVEEDIKEMSK"
misc_feature complement(204248..204943)
/locus_tag="Rleg_6767"
/note="Transcriptional regulators [Transcription]; Region:
FadR; COG2186"
/db_xref="CDD:32369"
misc_feature complement(204725..204913)
/locus_tag="Rleg_6767"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature complement(order(204728..204739,204743..204748,
204776..204778,204785..204790,204794..204808,
204830..204835,204839..204841,204908..204910))
/locus_tag="Rleg_6767"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(204281..204646)
/locus_tag="Rleg_6767"
/note="This entry represents the C-terminal ligand binding
domain of many members of the GntR family; Region: FCD;
smart00895"
/db_xref="CDD:197963"
gene 205189..205467
/locus_tag="Rleg_6768"
/db_xref="GeneID:8022698"
CDS 205189..205467
/locus_tag="Rleg_6768"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984769.1"
/db_xref="GI:241666685"
/db_xref="GeneID:8022698"
/translation="MTYVSSPSYDRNDASRASNLRQCLETARRRLDEISHNSETEKIE
TLVASAVEAGWEEDEVREALSAGDEQGNKMPEHKPPVPTIGVVPSSSF"
gene 205844..207469
/locus_tag="Rleg_6769"
/db_xref="GeneID:8022699"
CDS 205844..207469
/locus_tag="Rleg_6769"
/inference="protein motif:PFAM:PF00135"
/note="PFAM: carboxylesterase type B;
KEGG: asu:Asuc_2093 carboxylesterase type B"
/codon_start=1
/transl_table=11
/product="carboxylesterase type B"
/protein_id="YP_002984770.1"
/db_xref="GI:241666686"
/db_xref="InterPro:IPR002018"
/db_xref="GeneID:8022699"
/translation="MKRTFLYYCTLISALSAMTASIVGAPALAEEFVASQSKTVVETN
KGSLVGALDDGIFSYLGVPYAHADRFMPAEEVAPWKGIRPAVTYGENCFIPRMKEVAG
DELFNPHRYLPMSEACQFLNIWTPAINDGKKRPVMVWIHGGGFTNGSGIELTSYDGHN
LSKDGDVVVVTLNHRLNVLGFLDLSAYGEKYKRTGNASVTDLVAALKWVHDNAAAFGG
DPGNVTIFGQSGGGYKVRALMGTPSAKGLFQKAIVQSGSRSDSVVDQASSRKVAELTL
ANLGLKAEEIDKLADVDYYDLLAAADKAIKDATAQGAKDARYAPVQDGDYIPVNPVGT
EWVDQAKDIPLMVGNTLNEFETVINHKAGELLADNKNNWDEDKSEAKLKERFADKSDA
VGKAFMAAYPEKKIADAYFLDLRFRPGAIRDLDLKAKQNGAPVYSYMFAYESPVLDGI
AMAWHCSELPYVFANAALVKTSTGGGSDALALSRKVSQAWVNFARNGKPSAEGLPDWP
AYTTDKPATMVLDKQSRVSVDLDRKLLQAAGAL"
sig_peptide 205844..205933
/locus_tag="Rleg_6769"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.996 at
residue 30"
misc_feature 205952..207439
/locus_tag="Rleg_6769"
/note="Carboxylesterase type B [Lipid metabolism]; Region:
PnbA; COG2272"
/db_xref="CDD:32453"
misc_feature 205961..207406
/locus_tag="Rleg_6769"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature order(206267..206275,206525..206533,206540..206542,
206996..207001,207074..207076,207209..207211,
207218..207220)
/locus_tag="Rleg_6769"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29383"
misc_feature order(206528..206530,206900..206902,207206..207208)
/locus_tag="Rleg_6769"
/note="catalytic triad [active]"
/db_xref="CDD:29383"
gene complement(207547..208377)
/locus_tag="Rleg_6770"
/db_xref="GeneID:8022700"
CDS complement(207547..208377)
/locus_tag="Rleg_6770"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR; Male
sterility domain; NAD-dependent epimerase/dehydratase;
KEGG: rpb:RPB_0526 short chain dehydrogenase;
SNP /replace=T;
SNP /replace=A;
SNP /replace=G;
SNP /replace=C;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase"
/protein_id="YP_002984771.1"
/db_xref="GI:241666687"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR013120"
/db_xref="GeneID:8022700"
/translation="MGKTWMITGASSGFGRIMTEKLLARGDRVAATVRKPAALDDLKS
HYGDNLWIATLDVSNDGAVRSVVDAAFGAMGRIDVVVSNAGYGLFGAAEEVSDEQIRH
QIDTNLVGSIQVIRAALPHMRAQGGGRILQVSSEGGQIAYPNFSLYHATKWGIEGFIE
AVSQEVAPFGIEFIIAEPGPARTDFGRGLVAPRPMKAYDATPAGDIRRAIADGRFEAK
GDPVKMAQAMIEAAEQHLAPKRLALGAGSYASIRKALVERLAELDAFKEVTISADVDA
"
misc_feature complement(207550..208377)
/locus_tag="Rleg_6770"
/note="short chain dehydrogenase; Provisional; Region:
PRK06482"
/db_xref="CDD:180585"
misc_feature complement(207634..208371)
/locus_tag="Rleg_6770"
/note="17beta hydroxysteroid dehydrogenase-like, classical
(c) SDRs; Region: 17beta-HSD-like_SDR_c; cd05374"
/db_xref="CDD:187632"
misc_feature complement(order(207823..207831,207835..207837,
207922..207924,207934..207936,207973..207981,
208060..208062,208120..208131,208207..208215,
208276..208278,208336..208347,208351..208353))
/locus_tag="Rleg_6770"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187632"
misc_feature complement(order(207922..207924,207934..207936,
207973..207975,208057..208059))
/locus_tag="Rleg_6770"
/note="active site"
/db_xref="CDD:187632"
misc_feature complement(order(207637..207639,207766..207768,
207775..207777,207838..207843,207934..207936,
207952..207954,207967..207975))
/locus_tag="Rleg_6770"
/note="steroid binding site; other site"
/db_xref="CDD:187632"
gene 208488..209393
/locus_tag="Rleg_6771"
/db_xref="GeneID:8022701"
CDS 208488..209393
/locus_tag="Rleg_6771"
/inference="protein motif:PFAM:PF03466"
/note="PFAM: LysR substrate-binding; regulatory protein
LysR;
KEGG: mlo:mll2472 transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002984772.1"
/db_xref="GI:241666688"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:8022701"
/translation="MNYKPSLADLRALSAIVNHRSFRKAADELGLSPSTLSHMMRSLE
ANMGVRLLHRTTRSVAATEAGERLVTRLTPLFRDFDLALEEVNEFRGHPSGTLRVNTS
EIAARVLLDAAVPTFLTCYPDMSLDLVTDNRLVDVVADGFDAGIRLREAVPLDMIAVE
FGGDTRFVAVASPAYLAAHPAPQTPDALKTHACIRFRLPSGKLFRWEFEKHGHEIAVD
VPGVLTLDHVELMAQAAAKGLGIAYVSDRTARPFLESGALVTVLDDWCPAIPGLCLYY
PGHRHVPQGLRAFITVLTEVERHGR"
misc_feature 208500..209381
/locus_tag="Rleg_6771"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature 208506..208685
/locus_tag="Rleg_6771"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 208764..209357
/locus_tag="Rleg_6771"
/note="The C-terminal substrate binding domain of an
uncharacterized LysR-type transcriptional regulator
CrgA-like, contains the type 2 periplasmic binding fold;
Region: PBP2_CrgA_like_5; cd08474"
/db_xref="CDD:176163"
misc_feature order(208800..208802,208812..208814,208929..208931,
208971..208973,208980..208982,209169..209171,
209220..209222,209301..209303)
/locus_tag="Rleg_6771"
/note="putative effector binding pocket; other site"
/db_xref="CDD:176163"
misc_feature order(208803..208808,208818..208823,208827..208832,
208839..208841,208851..208853,208857..208877,
209061..209063,209151..209165,209184..209189,
209196..209198)
/locus_tag="Rleg_6771"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176163"
gene complement(209401..210291)
/locus_tag="Rleg_6772"
/db_xref="GeneID:8022702"
CDS complement(209401..210291)
/locus_tag="Rleg_6772"
/inference="protein motif:PFAM:PF03466"
/note="PFAM: LysR substrate-binding; regulatory protein
LysR;
KEGG: mlo:mlr0919 transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002984773.1"
/db_xref="GI:241666689"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:8022702"
/translation="MKRGRLPLTALRSFEVAGRLESFTRAAQELFISQAAVSRQIREL
ETLLGEALFERRHRGVHLTASGNKLLAILTSSFDRIDESLEEIRSRPARAALTISVEP
SFAACWLVPRLPEFRERHPEIDVTIDADSRLVEFRGGQAEIAIRHSASVTAWPRTESG
HLADVRMVPVAAPALLKGGPAIDRPEDMLCHTLLHEETRDVWFRWFEMAGIAMPEIAR
GPVYADGGLVMQAVLRGQGIALMDDIFAEEEIRAGRLLRLSDLAVAHGAYWLVARSFE
RLAPPASFFVRWINSRIETF"
misc_feature complement(209404..210279)
/locus_tag="Rleg_6772"
/note="DNA-binding transcriptional activator GcvA;
Provisional; Region: PRK11139"
/db_xref="CDD:182990"
misc_feature complement(210094..210270)
/locus_tag="Rleg_6772"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(209425..210009)
/locus_tag="Rleg_6772"
/note="The C-terminal substrate domain of LysR-type GcdR,
TrPI, HvR and beta-lactamase regulators, and that of other
closely related homologs; contains the type 2 periplasmic
binding fold; Region: PBP2_GcdR_TrpI_HvrB_AmpR_like;
cd08432"
/db_xref="CDD:176123"
misc_feature complement(order(209905..209925,209929..209982,
209986..210009))
/locus_tag="Rleg_6772"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176123"
misc_feature complement(order(209557..209559,209617..209625,
209980..209982,209986..209991))
/locus_tag="Rleg_6772"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:176123"
gene complement(210502..211317)
/locus_tag="Rleg_6773"
/db_xref="GeneID:8022703"
CDS complement(210502..211317)
/locus_tag="Rleg_6773"
/inference="protein motif:PFAM:PF03372"
/note="PFAM: Endonuclease/exonuclease/phosphatase;
KEGG: rec:RHECIAT_PA0000174 putative
endonuclease/exonuclease/phosphatase protein"
/codon_start=1
/transl_table=11
/product="Endonuclease/exonuclease/phosphatase"
/protein_id="YP_002984774.1"
/db_xref="GI:241666690"
/db_xref="InterPro:IPR005135"
/db_xref="GeneID:8022703"
/translation="MHARKDSLPASILASIRSRKKRLDAAYTEARPPTAGTLIASYNV
HKCIGTDRRFDPERTSRVIHEIGADVIALQEADTRFGERTGILDLGRLERETGLIAVP
IAGMAKAHGWHGNVVLFKKGLVHDVHQVKLPGLEPRGALVAEIELEKGGVLRIIAAHF
GLLRHSRAQQARMLVELINDRHEMPTILLGDLNEWRLGDRSSLNTFQSAFGPLPPAVP
SFPAGLPLLALDRIIANRKGIISEVEAHDTPLARIASDHLPIKALIDLEPVAG"
misc_feature complement(210514..211230)
/locus_tag="Rleg_6773"
/note="Metal-dependent hydrolase [General function
prediction only]; Region: ElsH; COG3568"
/db_xref="CDD:33370"
misc_feature complement(order(210547..210552,210628..210630,
210739..210741,210745..210747,210841..210843,
211093..211095,211189..211191))
/locus_tag="Rleg_6773"
/note="putative catalytic site [active]"
/db_xref="CDD:197306"
misc_feature complement(order(210550..210552,211093..211095))
/locus_tag="Rleg_6773"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:197306"
misc_feature complement(order(210547..210549,210739..210741,
210841..210843))
/locus_tag="Rleg_6773"
/note="putative phosphate binding site [ion binding];
other site"
/db_xref="CDD:197306"
gene complement(211411..212874)
/locus_tag="Rleg_6774"
/db_xref="GeneID:8022704"
CDS complement(211411..212874)
/locus_tag="Rleg_6774"
/inference="protein motif:PFAM:PF00614"
/note="PFAM: phospholipase D/Transphosphatidylase;
SMART: phospholipase D/Transphosphatidylase;
KEGG: rec:RHECIAT_PA0000173 transmembrane cardiolipin
synthetase protein"
/codon_start=1
/transl_table=11
/product="phospholipase D/Transphosphatidylase"
/protein_id="YP_002984775.1"
/db_xref="GI:241666691"
/db_xref="InterPro:IPR001736"
/db_xref="GeneID:8022704"
/translation="MFYLLSTYWPHILFVVSIAMGAAAAIHAAMTKEEVRAAIGWVGV
IILSPIIGAVLYAIAGINRIRRKSLSVRRDALLLAAEFDELETFDAEAETVISQFGRR
FAALQTLGDRVTRNPLTSGNTIDVLETGDEAYAAMKTAIDEAARSILLETYIFDRDAV
GLRIADALIAAASRGVEVRVLIDAVGARYSVPSILGHLREGGVTVAVFNGNVIMGLRL
PYANLRTHRKILIVDGKIALTGGMNIRAGFSEEATGESFAHDTHFSVTGAVVADLFDL
AAEDWRFSTQELLNDEPWRIEPPERSPGDPILMRVVASGPDRSVETNHKMLMGAFSVA
RQSIRIMSPYFLPDRELISALVTAARRGVEVDIVVPALNNLVLVDRAMTAQFDQILKN
YCRIWRSTGSFSHSKLLTIDGTWAYVGSSNLDPRSLRLNFEVDLEVLNEGFAAEIDEH
IEETLKTATPVTLEGLQARPFPVRLLEKVLWLGSPYL"
sig_peptide complement(212788..212874)
/locus_tag="Rleg_6774"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.990) with cleavage site probability 0.591 at
residue 29"
misc_feature complement(211414..212772)
/locus_tag="Rleg_6774"
/note="cardiolipin synthetase; Reviewed; Region: cls;
PRK01642"
/db_xref="CDD:179315"
misc_feature complement(212026..212493)
/locus_tag="Rleg_6774"
/note="Putative catalytic domain, repeat 1, of
uncharacterized proteins similar to bacterial cardiolipin
synthase; Region: PLDc_CLS_unchar2_1; cd09157"
/db_xref="CDD:197254"
misc_feature complement(order(212095..212097,212146..212148,
212152..212154,212191..212193,212197..212199))
/locus_tag="Rleg_6774"
/note="putative active site [active]"
/db_xref="CDD:197254"
misc_feature complement(212197..212199)
/locus_tag="Rleg_6774"
/note="catalytic site [active]"
/db_xref="CDD:197254"
misc_feature complement(211414..211941)
/locus_tag="Rleg_6774"
/note="Putative catalytic domain, repeat 2, of
uncharacterized proteins similar to bacterial cardiolipin
synthase; Region: PLDc_CLS_unchar2_2; cd09163"
/db_xref="CDD:197260"
misc_feature complement(order(211576..211578,211609..211611,
211615..211617,211654..211656,211660..211662))
/locus_tag="Rleg_6774"
/note="putative active site [active]"
/db_xref="CDD:197260"
misc_feature complement(211660..211662)
/locus_tag="Rleg_6774"
/note="catalytic site [active]"
/db_xref="CDD:197260"
gene 213036..213677
/locus_tag="Rleg_6775"
/db_xref="GeneID:8022705"
CDS 213036..213677
/locus_tag="Rleg_6775"
/inference="protein motif:TFAM:TIGR00758"
/note="TIGRFAM: phage SPO1 DNA polymerase-related protein;
PFAM: uracil-DNA glycosylase;
KEGG: ret:RHE_PE00232 DNA-directed DNA polymerase protein"
/codon_start=1
/transl_table=11
/product="phage SPO1 DNA polymerase-related protein"
/protein_id="YP_002984776.1"
/db_xref="GI:241666692"
/db_xref="InterPro:IPR005122"
/db_xref="InterPro:IPR005273"
/db_xref="GeneID:8022705"
/translation="MTIAANVGPAWALEVANADSIAELWHQAEDCTRCDLYRNATQIV
FGEGSGKAEIVLIGEQPGDQEDLTGRPFVGPAGRLLDRCLEEAGLDRQRCYVTNAVKH
FKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNILQPKLVVTLGASALYALLGPKAKLT
PERGHILHPTNHPPVLVTIHPSYLLRIRNEADRDQQRRDFVSDLHKAAEFRPR"
misc_feature 213126..213659
/locus_tag="Rleg_6775"
/note="Family 4 Uracil-DNA glycosylase (UDG), found
exclusively in thermophilic organisms; Region:
UDG_F4_TTUDGA_like; cd10030"
/db_xref="CDD:198428"
misc_feature order(213126..213128,213132..213137,213141..213146,
213153..213155,213333..213341,213405..213410,
213417..213419)
/locus_tag="Rleg_6775"
/note="Fe-S cluster binding site [ion binding]; other
site"
/db_xref="CDD:198428"
misc_feature order(213207..213215,213228..213230,213246..213251,
213327..213329,213573..213575)
/locus_tag="Rleg_6775"
/note="active site"
/db_xref="CDD:198428"
gene 213820..214074
/locus_tag="Rleg_6776"
/db_xref="GeneID:8022706"
CDS 213820..214074
/locus_tag="Rleg_6776"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000171"
/note="KEGG: rec:RHECIAT_PA0000171 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984777.1"
/db_xref="GI:241666693"
/db_xref="GeneID:8022706"
/translation="MAETREEWIKKRAYTLWEEEGYPTGRDSIHWEQARDERDALEGS
AASSNGKEAKPKAKRSVTGSKTNGVVTPAPKRTASRKTAS"
misc_feature 213823..213939
/locus_tag="Rleg_6776"
/note="Protein of unknown function (DUF2934); Region:
DUF2934; pfam11154"
/db_xref="CDD:204599"
gene 214391..214564
/locus_tag="Rleg_6777"
/db_xref="GeneID:8022707"
CDS 214391..214564
/locus_tag="Rleg_6777"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000169"
/note="KEGG: rec:RHECIAT_PA0000169 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984778.1"
/db_xref="GI:241666694"
/db_xref="GeneID:8022707"
/translation="MSLLIVAALLYLGLALGLILVVDNLVGLVFRDPRAPADLPFFHI
GRALVASQKLYRK"
gene 214737..217454
/locus_tag="Rleg_6778"
/db_xref="GeneID:8022708"
CDS 214737..217454
/locus_tag="Rleg_6778"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein; GAF
domain protein; response regulator receiver; PAS fold-4
domain protein; histidine kinase A domain protein;
SMART: ATP-binding region ATPase domain protein; response
regulator receiver; histidine kinase A domain protein; GAF
domain protein;
KEGG: rec:RHECIAT_PA0000168 putative two-component sensor
histidine kinase/response regulator hybrid protein"
/codon_start=1
/transl_table=11
/product="multi-sensor hybrid histidine kinase"
/protein_id="YP_002984779.1"
/db_xref="GI:241666695"
/db_xref="InterPro:IPR000700"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR003018"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR013656"
/db_xref="GeneID:8022708"
/translation="MRSVGDGWPRGGGEIGELLRHPDFHAVGLGPVESWPASLKHVAE
MVLNSRQPKFVAWGPDLAFLYNEAYVPVFPERHPDALGRPFREVWADIWEQFSPIVTS
TLEGSSQLFKELLIPMRRDGRTEDTWFTFSYTPLRDDDGRVAGILCAALDVTDQVSAK
RGEQNALEELRAKSEALAVVNRAGAAITAEPSVERLTQIVVDAGVTLTGAEFGAFFYN
VDDGEGGSYMLYALAGVDRKNFEKFPMPRNTKVFAPTFNGEGITRSDDILLDPRYGQN
APHAGMPKGHLPVRSYLAVPVKSRDGGVIGGLFFGHGQPGRFSQAAEASLVSLAGQSA
VAIDNIRLFRAAKVEIDQRRNMEDQLRKLNEMLEVRVAAEIAERQQAEAALQQSQKME
SIGKLTGGVAHDFNNLLQVISGNLQLLGKDVAESGRAKERISNALAAVERGSRLASQL
LAFGRRQPLEPKVVNIGRLVTGMDDMLRRALGEEIEVETMVSGGLWNSFADPTQIENA
LLNLAINSRDAMAGPGKLTIEVGNAFLDDTYSRTHPEVTAGQYVVLAVTDTGSGMMQE
VIEQAFEPFFSTKPEGKGTGLGLSMVYGFVKQSGGHVKIYSEIGEGTTVKLYLPRSFQ
SEDRITNVDNVPATGGTETILVAEDDEGVRTTVVEMLTDLGYYVLKAKDAQSALTVIE
SGAHIDLLFTDVVMPGPLRSPELARMARERLPDIAVLYTSGYTENSIVHGGRLDPGLE
LLSKPYTREELARKIRHVLTIRTQRRQGASDAAVAAPKHPEVAREKLKLLLVEDDAFI
RMDTAELLQDLGYDVIEADSGERGVEILRHTIVDIIVADVGLPGMSGQAFAAKAREAF
PSVGLVFATGNSSLPDANHLPGSVLLSKPFSSIALDQAVKNAVQQRPGV"
misc_feature 214875..215207
/locus_tag="Rleg_6778"
/note="PAS fold; Region: PAS_4; pfam08448"
/db_xref="CDD:117025"
misc_feature 215310..215750
/locus_tag="Rleg_6778"
/note="GAF domain; Region: GAF_2; pfam13185"
/db_xref="CDD:205366"
misc_feature 215310..215747
/locus_tag="Rleg_6778"
/note="GAF domain; Region: GAF; pfam01590"
/db_xref="CDD:201875"
misc_feature 215907..216101
/locus_tag="Rleg_6778"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(215925..215927,215937..215939,215949..215951,
215958..215960,215970..215972,215979..215981,
216030..216032,216042..216044,216051..216053,
216063..216065,216072..216074,216084..216086)
/locus_tag="Rleg_6778"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 215943..215945
/locus_tag="Rleg_6778"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 216249..216593
/locus_tag="Rleg_6778"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(216267..216269,216279..216281,216288..216290,
216402..216404,216408..216410,216414..216416,
216420..216425,216492..216503,216549..216551,
216555..216557,216570..216575,216579..216581)
/locus_tag="Rleg_6778"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 216279..216281
/locus_tag="Rleg_6778"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(216414..216416,216420..216422,216492..216494,
216498..216500)
/locus_tag="Rleg_6778"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 216666..217004
/locus_tag="Rleg_6778"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 216669..217013
/locus_tag="Rleg_6778"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(216678..216683,216813..216815,216840..216842,
216900..216902,216957..216959,216966..216971)
/locus_tag="Rleg_6778"
/note="active site"
/db_xref="CDD:29071"
misc_feature 216813..216815
/locus_tag="Rleg_6778"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(216822..216827,216834..216842)
/locus_tag="Rleg_6778"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 216966..216974
/locus_tag="Rleg_6778"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 217101..217424
/locus_tag="Rleg_6778"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 217104..217433
/locus_tag="Rleg_6778"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(217113..217118,217245..217247,217269..217271,
217329..217331,217377..217379,217386..217391)
/locus_tag="Rleg_6778"
/note="active site"
/db_xref="CDD:29071"
misc_feature 217245..217247
/locus_tag="Rleg_6778"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(217254..217259,217263..217271)
/locus_tag="Rleg_6778"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 217386..217394
/locus_tag="Rleg_6778"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(217484..217690)
/locus_tag="Rleg_6779"
/db_xref="GeneID:8022709"
CDS complement(217484..217690)
/locus_tag="Rleg_6779"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: rec:RHECIAT_PA0000167 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984780.1"
/db_xref="GI:241666696"
/db_xref="GeneID:8022709"
/translation="MMPCWSVRAVRAFPYHDDGSFHDGGSHHDDGRLDPADTISIELT
ARDDSCTSEVDLMRKYPELDGADA"
gene 217994..218308
/locus_tag="Rleg_6780"
/db_xref="GeneID:8022710"
CDS 217994..218308
/locus_tag="Rleg_6780"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000166"
/note="KEGG: rec:RHECIAT_PA0000166 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984781.1"
/db_xref="GI:241666697"
/db_xref="GeneID:8022710"
/translation="MPRGDKSDYTDKQKRKAEHIEEGYEDRGVSEKEAERRAWATVNK
ESGGGNKSGSGRGKKDTHESSEKGGRVGGAASAARSKEERSASGKKAAATRKRNEHHS
HH"
gene 218362..218652
/locus_tag="Rleg_6781"
/db_xref="GeneID:8022711"
CDS 218362..218652
/locus_tag="Rleg_6781"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000165"
/note="KEGG: rec:RHECIAT_PA0000165 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984782.1"
/db_xref="GI:241666698"
/db_xref="GeneID:8022711"
/translation="MAKSKKKWSQDVTERSDAMDLKEGVFKSDDPRKIARSVKHSAEE
SDRRKSSPYRAAMSMLTFYINRAGDQLTKKRRGTLEKAKDELRKDFGRKPKD"
misc_feature 218380..218637
/locus_tag="Rleg_6781"
/note="Protein of unknown function (DUF3175); Region:
DUF3175; pfam11373"
/db_xref="CDD:151813"
gene 218659..219384
/locus_tag="Rleg_6782"
/db_xref="GeneID:8022712"
CDS 218659..219384
/locus_tag="Rleg_6782"
/inference="protein motif:PFAM:PF00043"
/note="PFAM: Glutathione S-transferase domain;
KEGG: ret:RHE_PE00210 glutathione S-transferase protein"
/codon_start=1
/transl_table=11
/product="glutathione S-transferase"
/protein_id="YP_002984783.1"
/db_xref="GI:241666699"
/db_xref="InterPro:IPR004046"
/db_xref="GeneID:8022712"
/translation="MAYELYYWDGIQGRGEFVRLALEEVGAAYIDVTRQPGRGTGAMM
DVMESESETHIPFAPPFLKDGDLIIPHVANILFYLGPKLGLAPEDDGLRHVVNGLQLT
VTDFVAEAHDTHHPIDMSLYYEDQKPEAKARSAAFIRDRIPKFLGYFERVLRQNPKGP
NHLVGDALTYVDLSLFQVIEGLNYAFPKAMTKRKAEYPCLLALHDAVAKRPNIASYLA
SARRLAFNEEGIFRHYPELDGAG"
misc_feature 218665..218901
/locus_tag="Rleg_6782"
/note="GST_N family, Class Sigma_like; composed of GSTs
belonging to class Sigma and similar proteins, including
GSTs from class Mu, Pi and Alpha. GSTs are cytosolic
dimeric proteins involved in cellular detoxification by
catalyzing the conjugation of...; Region:
GST_N_Sigma_like; cd03039"
/db_xref="CDD:48588"
misc_feature 218671..219321
/locus_tag="Rleg_6782"
/note="glutathione s-transferase; Provisional; Region:
PTZ00057"
/db_xref="CDD:173353"
misc_feature order(218677..218679,218698..218700,218830..218838,
218869..218874)
/locus_tag="Rleg_6782"
/note="GSH binding site (G-site) [chemical binding]; other
site"
/db_xref="CDD:48588"
misc_feature order(218683..218685,218692..218700,218704..218709,
218713..218718,218725..218730,218755..218757,
218875..218877,218887..218889,218896..218898)
/locus_tag="Rleg_6782"
/note="C-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:48588"
misc_feature order(218866..218871,218875..218877,218887..218889,
218899..218901)
/locus_tag="Rleg_6782"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48588"
misc_feature 218935..219279
/locus_tag="Rleg_6782"
/note="C-terminal, alpha helical domain of Class
Sigma-like Glutathione S-transferases; Region:
GST_C_Sigma_like; cd03192"
/db_xref="CDD:198301"
misc_feature order(218935..218937,218947..218952,218959..218964,
218971..218973)
/locus_tag="Rleg_6782"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:198301"
misc_feature order(218947..218949,218956..218958,218968..218970,
219166..219168,219178..219180,219187..219189,
219199..219201)
/locus_tag="Rleg_6782"
/note="N-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:198301"
misc_feature order(218968..218970,218977..218982,218989..218994,
219190..219192,219199..219201)
/locus_tag="Rleg_6782"
/note="substrate binding pocket (H-site) [chemical
binding]; other site"
/db_xref="CDD:198301"
gene complement(219518..220396)
/locus_tag="Rleg_6783"
/db_xref="GeneID:8022713"
CDS complement(219518..220396)
/locus_tag="Rleg_6783"
/inference="protein motif:TFAM:TIGR02778"
/note="TIGRFAM: DNA polymerase LigD, polymerase domain
protein;
PFAM: DNA primase small subunit;
KEGG: rec:RHECIAT_PA0000163 putative DNA ligase protein"
/codon_start=1
/transl_table=11
/product="DNA polymerase LigD, polymerase domain protein"
/protein_id="YP_002984784.1"
/db_xref="GI:241666700"
/db_xref="InterPro:IPR002755"
/db_xref="InterPro:IPR014145"
/db_xref="GeneID:8022713"
/translation="MSPRHTPASDVSLTHPDRLYWPDEGVTKQALADYYAAVWPFMAP
YVVNRPLALLRLPDGIKGHQRFFQKHAWKGMNPHIEEIADPQDADGEKLLRIGDFNGL
VALVQSAVLEIHPWGATADNWERPDMVTMDLDPGEDVTWSAVIAAALELKSRLEARGL
AAFVKTSGGKGLHVVTPLAPKAGWAEVKDFAHSLAESVSADAPDKYLATATKAKRGGH
IYIDYLRNGRGNTAVAAYSTRARSGAPVSMPLDWSELNEVSGPAAFTLANVPQRLETR
PKDPWGNFFDAAVPLE"
misc_feature complement(219632..220315)
/locus_tag="Rleg_6783"
/note="PaeLigD_Pol_like: Polymerase (Pol) domain of
bacterial LigD proteins similar to Pseudomonas aeruginosa
(Pae) LigD. The LigD Pol domain belongs to the
archaeal/eukaryal primase (AEP) superfamily. In
prokaryotes, LigD along with Ku is required for...;
Region: PaeLigD_Pol_like; cd04862"
/db_xref="CDD:80312"
misc_feature complement(order(219674..219682,219704..219706,
219722..219724,219731..219733,219878..219880,
219884..219889,219896..219898,219995..219997,
220001..220003,220055..220057,220196..220198))
/locus_tag="Rleg_6783"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:80312"
gene complement(220393..221400)
/locus_tag="Rleg_6784"
/db_xref="GeneID:8022714"
CDS complement(220393..221400)
/locus_tag="Rleg_6784"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000162"
/note="KEGG: rec:RHECIAT_PA0000162 probable DNA
topoisomerase I protein"
/codon_start=1
/transl_table=11
/product="putative DNA topoisomerase I protein"
/protein_id="YP_002984785.1"
/db_xref="GI:241666701"
/db_xref="InterPro:IPR001631"
/db_xref="GeneID:8022714"
/translation="MNAEAITDLGLVYVSDTEPGIRRRRKGKGFSYVMPDGTTLADEL
QRARIGALGLPPAYENVWICLYDNGHLQATGFDARGRKQYRYHKEWQSFRSAGKFHQL
IEFGRALPRIRRTVLRHLDTGAEDVNGVLAALTTLLDEAHLRVGNQAYVRENGTYGAT
TLLKRHLKIVDGQIELKFRAKGGKRVQRSLKHPRLQKILEEIADLPGRQLFVWKDESG
TLKPIDSGRLNAYLAEISGIPISAKTFRTWAGSLAAFGAARETILGGGRPTVKQMSEA
AAEALHNTPAISRSSYIHPAIISLAGNDHPLIETGNEPLRGLRAEENRLLDFLTSEIE
E"
misc_feature complement(220405..221391)
/locus_tag="Rleg_6784"
/note="Topoisomerase IB [DNA replication, recombination,
and repair]; Region: COG3569"
/db_xref="CDD:33371"
misc_feature complement(220498..221133)
/locus_tag="Rleg_6784"
/note="DNA topoisomerase IB, C-terminal catalytic domain.
Topoisomerase I promotes the relaxation of both positive
and negative DNA superhelical tension by introducing a
transient single-stranded break in duplex DNA. This
function is vital for the processes of...; Region:
Topo_IB_C; cd00659"
/db_xref="CDD:29496"
misc_feature complement(order(220525..220527,220549..220554,
220663..220665,220672..220680,220702..220704,
220714..220716,220855..220860,220933..220935,
220954..220956,220960..220971))
/locus_tag="Rleg_6784"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29496"
misc_feature complement(order(220525..220527,220552..220554,
220663..220665,220672..220674,220858..220860,
220969..220971))
/locus_tag="Rleg_6784"
/note="active site"
/db_xref="CDD:29496"
misc_feature complement(order(220525..220527,220552..220554,
220663..220665,220672..220674,220858..220860,
220969..220971))
/locus_tag="Rleg_6784"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:29496"
misc_feature complement(order(220552..220554,220663..220665,
220672..220674,220858..220860,220969..220971))
/locus_tag="Rleg_6784"
/note="catalytic residues [active]"
/db_xref="CDD:29496"
gene complement(221416..223572)
/locus_tag="Rleg_6785"
/db_xref="GeneID:8022715"
CDS complement(221416..223572)
/locus_tag="Rleg_6785"
/inference="protein motif:TFAM:TIGR02100"
/note="KEGG: rec:RHECIAT_PA0000161 glycosyl hydrolase
(glycogen debranching) protein;
TIGRFAM: glycogen debranching enzyme GlgX;
PFAM: glycoside hydrolase family 13 domain protein; alpha
amylase catalytic region;
SMART: alpha amylase catalytic sub domain"
/codon_start=1
/transl_table=11
/product="glycogen debranching enzyme GlgX"
/protein_id="YP_002984786.1"
/db_xref="GI:241666702"
/db_xref="InterPro:IPR004193"
/db_xref="InterPro:IPR006047"
/db_xref="InterPro:IPR006589"
/db_xref="InterPro:IPR011837"
/db_xref="GeneID:8022715"
/translation="MSFSFSELDFLKPELGAEYTGSGTHFAVFSAHAEQMELCLFSPD
GKNEIARLPLPKREGDIWSGYIAGVGPGTVYGYRAHGPYDPQAGHRFNPNKLLLDPYA
KQVTGELKWDDALFGYQIGEDDLSFDERDSAPFTVKGVVQDPDFDWAGEEAIRRPWPD
TIIYEAHVRGLTMTHPKVPDRLRGTFLGMCSDPIIDHLVKLGISAIELLPIQYFLDDR
YLLENNLRNYWGYQTLGFFAPQSRYMSGDKITEIKTMVKKFHAAGIEVIMDVVYNHTA
EGSEKGPTLSFRGLDNASYYILSPDDPRHTFDTTGTGNTLNAANPMVMRMVLDSLRYW
VGVMHIDGFRFDLASTLGRQDMEFDRQGLFFGAIRQDPILAGVKLIAEPWDVGDGGYQ
VGGFPHPFREWNDKFRDDVRRFWKGDGGMVSEISQRITGSAVQFNHSDRGATSSINLL
SAHDGFTLMDTVSFDDKHNDANGEDNRDGHSDNHSDNMGAEGVTDNEDINSLRARRRR
NMMATLMLSQGVPMILAGDELGNSQGGNNNAYCQDNEIGWTDWSGLDDPFLDFCRQAV
AFRKAHPVLRQERFLTGETADDGRIEIAWYKPDGGFMDDGAWNDDGLQVLGVYVSRSV
HAPDTEEMDDLFLVFNAGGDCEVHLPVVNGLKQWSRVLDTGSETGSFEVREPENPVIV
YAQSVAVFAPKGQTEPPKGATKAERRRWFQFGRRSK"
misc_feature complement(221497..223548)
/locus_tag="Rleg_6785"
/note="glycogen debranching enzyme GlgX; Region:
glgX_debranch; TIGR02100"
/db_xref="CDD:131155"
misc_feature complement(223144..223530)
/locus_tag="Rleg_6785"
/note="N-terminal Early set domain associated with the
catalytic domain of Glycogen debranching enzyme and
bacterial isoamylase (also called glycogen
6-glucanohydrolase); Region: E_set_GDE_Isoamylase_N;
cd02856"
/db_xref="CDD:199886"
misc_feature complement(221857..223137)
/locus_tag="Rleg_6785"
/note="Alpha amylase catalytic domain found in glycogen
debranching enzymes; Region: AmyAc_Glg_debranch; cd11326"
/db_xref="CDD:200465"
misc_feature complement(order(222211..222216,222427..222429,
222532..222537,222541..222543))
/locus_tag="Rleg_6785"
/note="active site"
/db_xref="CDD:200465"
misc_feature complement(order(222211..222213,222427..222429,
222535..222537))
/locus_tag="Rleg_6785"
/note="catalytic site [active]"
/db_xref="CDD:200465"
gene complement(223676..224470)
/locus_tag="Rleg_6786"
/db_xref="GeneID:8022716"
CDS complement(223676..224470)
/locus_tag="Rleg_6786"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR
domain protein; NAD-dependent epimerase/dehydratase;
KEGG: rec:RHECIAT_PA0000160 probable
dehydrogenase/reductase protein"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_002984787.1"
/db_xref="GI:241666703"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8022716"
/translation="MVELAQSLASIKLPDLSGKAVLITGASTGIGAALARAFAAQGAK
VGVHYNASREPAEKLADEIRAAGGTVHLIQGDVSREGETERVVEETAKTFGHLDGLIN
NAGGMLGRKPTSEYTDAHYAAVMDLNARSVLAATRAAHPWLKKQGGFIINTTSIAARN
GGGNGAILYAASKGFVSTITRGHAKEFVPDRIRVNAVAPGVIATPFHERYTNDEQMEL
QRKSIPMGFVGTSEDCVGAYLFLASPTLSGYITGQIIEVNGGQLMP"
misc_feature complement(223682..224431)
/locus_tag="Rleg_6786"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature complement(223697..224410)
/locus_tag="Rleg_6786"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(223856..223861,223865..223876,
223952..223954,223964..223966,224006..224014,
224090..224092,224156..224164,224240..224248,
224315..224320,224324..224326,224381..224392,
224396..224398))
/locus_tag="Rleg_6786"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(223952..223954,223964..223966,
224006..224008,224087..224089))
/locus_tag="Rleg_6786"
/note="active site"
/db_xref="CDD:212491"
gene complement(224586..225176)
/locus_tag="Rleg_6787"
/db_xref="GeneID:8022717"
CDS complement(224586..225176)
/locus_tag="Rleg_6787"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: rsp:RSP_4068 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984788.1"
/db_xref="GI:241666704"
/db_xref="GeneID:8022717"
/translation="MSQPSSRRPAGLSFFYVSDAGWSLLSSIITVVTFVGAVGGIFWA
VFEYRENQETERTKYTLTLIETWETQGYRQAYGELRKFYTSFIETVPPADRKTAETSG
HARDNLLQSFNRRIAQEPARQEQVREVVYFFNRLGLCVSASLCSKETTAVFFNDTVQS
FLDAYGPYIESSKETLPGRGATLVDLSRELNPAGRD"
gene complement(225173..225613)
/locus_tag="Rleg_6788"
/db_xref="GeneID:8022718"
CDS complement(225173..225613)
/locus_tag="Rleg_6788"
/inference="similar to AA sequence:KEGG:mlr3301"
/note="KEGG: mlo:mlr3301 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984789.1"
/db_xref="GI:241666705"
/db_xref="GeneID:8022718"
/translation="MPSFRFRDAYGTVAVLAAAMLLLAPAAAGAACLICDEVVELDEV
RAKCFRQDYEKFLSTARSAETSNAEVDLSACAGDDGRERRGLDRMPGLLPPGGESTAR
NQRELRSVYIFDEAGLVCLKRLLDGHEGTIDPSVRFDLVENCKP"
sig_peptide complement(225521..225613)
/locus_tag="Rleg_6788"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.502 at
residue 31"
gene complement(225600..230264)
/locus_tag="Rleg_6789"
/db_xref="GeneID:8022719"
CDS complement(225600..230264)
/locus_tag="Rleg_6789"
/inference="protein motif:PFAM:PF00656"
/note="PFAM: peptidase C14 caspase catalytic subunit p20;
Peptidoglycan-binding domain 1 protein;
KEGG: scl:sce0912 hypothetical protein"
/codon_start=1
/transl_table=11
/product="peptidase C14 caspase catalytic subunit p20"
/protein_id="YP_002984790.1"
/db_xref="GI:241666706"
/db_xref="InterPro:IPR002048"
/db_xref="InterPro:IPR002477"
/db_xref="InterPro:IPR011600"
/db_xref="GeneID:8022719"
/translation="MRVIGIALACIMLLSQPALAQSPLDIIRSLTDGVTRDAAPPDAG
SPPSKPIPTLQSQLTRSQVQRLQRALEALGYYHGPIDGNAGVETWSSVVAWARDRGWE
APTTLRVAHLNSLEAERAQGQVAEQDRPGSGPEDGTIRRVQSALSRLGYYSGPVNGQT
DQATMAAMAAWAADRNWEAPASIREAHAVNMEEELSHRTGPVVGDAALPPWQPDDTGI
GSKICASTGYSKVCLRLACDAEAGVVLDFEEVAGYSTPSVSSAGLTVDRGPEATLPLD
GIRKRPVLDAGRDAALIAHLSSGRSLNLKLGTWSMSFGLAQFGPEYDRVGKACATLLA
RLRSGQDPFPGQFSRLADELAEATVSEGTWTSQPNMDLGGDDIRHGLTDPLLRGLTEG
VCIAICSETDMCRAYTFKPSGGGCFLKSAKGSPKPHAAAKSGVFDGRKAGLAPPPTRG
PGPIVDGAVGWHEGEPLEGFQARVKQAARRLGGSCEEEKETLRRLAEKFQWTLPHQGP
LRAGNSFAIEWSGNTLEDRIPVWFMVKAEQPVRFKGKGHVALGPDAPNPFAIKTGLGK
TRAMVALATRGAAASGSVSAIPLQAGPLNLSVTLVGYLRACEEEIVLKEGSERLEIAP
APAEIVLNTAEGRAAFTHSIDIPKFSRRILLNDTRFLLLDAASGTEIVERAGTHLRIS
PTHRFIGVEHNGRLDIVDMVDGHTAATADAGDLRWALGDSVVFTTLAPWAEVNFSSTF
GDHLRIREQITGPSCCTAERGQTRVAIDLENAAYAIWGGAGYRVGALQNPDYASIANS
SGAYSSEGGETIPLHFHMFWSLGMVSPVSVAREFDVAGGFKTTSTWEDWEVAEADSRR
PRDFTESLSRTLAKIELQAVMIDTAVASNDQGSTRAGNDTPLAAALPEQLLRLGVALD
PMVDGERLLASYAAGENNALHALDRDQRLKRSAEAMGRFRREAERAGWRFDWALPVGE
EGPISDCEHLLLGESSSSGGTGSLLAPRDVVEVSTVRTSRGAVWVARAECVAGATFGS
LRPYAALYVMDIARPAPAASAALQAEGAFFFENNAHRLWYQHAFRIKANDDLLLTYAP
GNGVITVRDRATQKFLWIGENLPNGDLLVDAWLTKDRRHAVQLNSDGNFYIHAILDDR
QSLLSGRIADDEIAVWTRDYFYDATAEAAALIDLKFPGRVGQYSLDRFGIARQVPDLA
RAVLDRGQTPQAVAEVGVPPSLTGEIALEENGSRVRAVLHFDPAETVHMSVFQDGVLT
GTVDAATIGNAVSIERLKDARWVSVIGFNSAGLASLPVSADLGEPLARRAVTRALVIG
VNTYEDERLRSLNYPLRDAGTVLETLTEPLGKEPPFRGEAGPKDRRATPEAILEATAR
LLDGLVRGDHAVLFLAGHGMQDRNGRFYFATSATDPTDLEHTALPFDRLAALFERTEA
RITILLDACHSGAAGTGAFTTNDDLANSLVALKSNLTILAAAKGRQESLGRREVGGLF
TNAVVTVLGKERDRYDHNHNGRIEASELYRGVKALVFAASDGKQTPWIINSRLVGDYA
LF"
sig_peptide complement(230202..230264)
/locus_tag="Rleg_6789"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 21"
misc_feature complement(229938..230090)
/locus_tag="Rleg_6789"
/note="Putative peptidoglycan binding domain; Region:
PG_binding_1; pfam01471"
/db_xref="CDD:201815"
misc_feature complement(228960..229172)
/locus_tag="Rleg_6789"
/note="Subfamily of PAN/APPLE-like domains; present in
plasma prekallikrein/coagulation factor XI, microneme
antigen proteins, and a few prokaryotic proteins.
PAN/APPLE domains fulfill diverse biological functions by
mediating protein-protein or...; Region:
APPLE_Factor_XI_like; cd01100"
/db_xref="CDD:29034"
misc_feature complement(order(229074..229076,229125..229127,
229131..229133))
/locus_tag="Rleg_6789"
/note="putative binding site; other site"
/db_xref="CDD:29034"
misc_feature complement(225624..226322)
/locus_tag="Rleg_6789"
/note="Caspase domain; Region: Peptidase_C14; pfam00656"
/db_xref="CDD:201376"
gene complement(230675..231889)
/locus_tag="Rleg_6790"
/db_xref="GeneID:8022720"
CDS complement(230675..231889)
/locus_tag="Rleg_6790"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: ret:RHE_PE00206 hypothetical protein"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily MFS_1"
/protein_id="YP_002984791.1"
/db_xref="GI:241666707"
/db_xref="InterPro:IPR003006"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8022720"
/translation="MSVSYRWVIVAAGALMTCVALGAMFSLAIFQEPIATATGWSHVG
IASAMTLNFIVMGFGGFFWGAASDRFGPRIVVMIGSVLLGLALVLASRAETLLQFQLT
YGILVGLAASTFFAPMIAATTAWFDENRGLAVSLVSAGMGVAPMTISPFARWLISTYE
WRPAMLIIGVAAWVLLVPAAFLVRRPPAETTDTGTEFAADGARPQLSKVFRSPQFIVL
GLTFFACCAAHSGPIFHMVNYATICGVAPMAAVSIYSVEGLAGLGGRLLYGSLADRIG
VKPVLVAGLLVQAAALATYLLVSQLGEFYALAIVFGSAYGGVMPLYAVLAREYFGPRI
IGTVFGAATMLSSLGMAFGPLIGGWIFDTFANYSWLFIGSAMVGLGAAAIALAFPPLA
RQKPQPAFGMAP"
sig_peptide complement(231803..231889)
/locus_tag="Rleg_6790"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.994) with cleavage site probability 0.416 at
residue 29"
misc_feature complement(230759..231874)
/locus_tag="Rleg_6790"
/note="oxalate/formate antiporter family transporter;
Region: 2A0111; TIGR00890"
/db_xref="CDD:162091"
misc_feature complement(230759..231862)
/locus_tag="Rleg_6790"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(230840..230842,230849..230854,
230861..230866,230873..230878,230909..230911,
230918..230923,230933..230935,230942..230947,
230954..230956,231095..231097,231107..231109,
231116..231118,231128..231130,231140..231142,
231179..231181,231188..231193,231200..231205,
231212..231214,231455..231457,231473..231478,
231485..231490,231521..231523,231530..231535,
231542..231547,231554..231559,231698..231703,
231707..231712,231722..231724,231731..231736,
231743..231745,231794..231799,231803..231811,
231818..231820))
/locus_tag="Rleg_6790"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(232065..233558)
/locus_tag="Rleg_6791"
/db_xref="GeneID:8022721"
CDS complement(232065..233558)
/locus_tag="Rleg_6791"
/inference="protein motif:PFAM:PF00884"
/note="PFAM: sulfatase;
KEGG: pla:Plav_3137 sulfatase;
SNP /replace=G;
SNP /replace=C;
SNP /replace=C;
SNP /replace=T;
SNP /replace=T;
SNP /replace=G;
SNP /replace=T;
SNP /replace=G;
SNP /replace=T;
SNP /replace=G;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="sulfatase"
/protein_id="YP_002984792.1"
/db_xref="GI:241666708"
/db_xref="InterPro:IPR000917"
/db_xref="GeneID:8022721"
/translation="MNIILVLIDSVNRNALSAYGGTEFATPNLQSFAQKAWRFDNHFV
GSLPCMPARREIFSGFSGMQWRPWGPLEPFDLRLPKLLESAGYTTAIVTDHYHYWEES
ANGYIQSFQGAEFIRGHELDFWEPLVPEADLPRWAHNIEKWRPGYGHRYFSNVANFND
EADFFPAKVMTSASEWLAKPKTGKPFFLQVESFDVHEPFDVPEPYASMYGDGAARDRF
TLWPPYQDAARQAEFMSQASPEELAFVRSQYGAKLTMTDRWLGKLFTTLDELELWDDT
AVIVTTDHGHDLGERGGYGKQFPHFDSHANIPLLVWHPGFQANGGAIKNLTSTVDLFA
SILAMAGVEPPRQTHSHSFLPLLKGETGNARNAVIYGTFGQGICCTDGEWTLIQPPDR
EKPLYAYSTMVPTTIEPQDRPVDHGYYIPGIDMPQWKIPITPDGPGDRRNLDSQPLLF
DRRNDPGQKRDLWQDRREERERMLHLMRQVVEQYGAPTELFQRLGLD"
misc_feature complement(<232494..233558)
/locus_tag="Rleg_6791"
/note="Arylsulfatase A and related enzymes [Inorganic ion
transport and metabolism]; Region: AslA; COG3119"
/db_xref="CDD:32933"
misc_feature complement(232479..233555)
/locus_tag="Rleg_6791"
/note="Sulfatase; Region: Sulfatase; pfam00884"
/db_xref="CDD:201490"
gene complement(233597..234454)
/locus_tag="Rleg_6792"
/db_xref="GeneID:8022722"
CDS complement(233597..234454)
/locus_tag="Rleg_6792"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: bha:BH1246 hypothetical protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984793.1"
/db_xref="GI:241666709"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022722"
/translation="MNVSMTHKARHIRFARDLITVILGIGLLLILAFPFIWVVLISFR
PDKEIFTRTFQLFTSVTLENYYTLLQNSPFPNYLRNSLVVCTISTVAAVTIALITAYG
FSRNRDFRGRGLLLILVICTQLFPYVILITPLYSMFFAVGLINNPLSLVLSYTAMNLP
FAIYLLLGYLDTIPQDLDEAAKLDGASTIQIIFKVILPIAWPGVVTVAVNAFVSGWDE
FLFALTLMTADENKTVPVGLAGFFGEYTTQWNLVMTASVISTLPTLVLFMLLQRKLVS
DLAAGAVKL"
misc_feature complement(233603..234361)
/locus_tag="Rleg_6792"
/note="ABC-type sugar transport system, permease component
[Carbohydrate transport and metabolism]; Region: UgpE;
COG0395"
/db_xref="CDD:30744"
misc_feature complement(233672..234148)
/locus_tag="Rleg_6792"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(233672..233677,233684..233689,
233693..233698,233705..233710,233738..233743,
233783..233788,233795..233806,233825..233827,
233834..233839,233879..233881,233930..233932,
233939..233944,233954..233956,233960..233965,
233972..233974,233978..233980,233984..233989,
234050..234052,234056..234061,234068..234097,
234101..234112,234140..234142))
/locus_tag="Rleg_6792"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(233789..233806,234050..234094))
/locus_tag="Rleg_6792"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(233708..233710,233738..233740,
233747..233749,233786..233788,234050..234052))
/locus_tag="Rleg_6792"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(233858..233860,233870..233875,
233891..233929))
/locus_tag="Rleg_6792"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(234451..235413)
/locus_tag="Rleg_6793"
/db_xref="GeneID:8022723"
CDS complement(234451..235413)
/locus_tag="Rleg_6793"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: mrd:Mrad2831_2891 binding-protein-dependent
transport systems inner membrane component"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984794.1"
/db_xref="GI:241666710"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022723"
/translation="MSVSANPDGALAKRAERRGSFRSWHFEPYGLVMPAMLILAIFFA
GPAFYNIALSFQDLSLFDLGKEGRWVGFANFAAVLKDDGIAGALFNTAFLLTFVTVVI
RLALGLALAILLNAEVFARWRIGWLVRSLVLVPFVTPPVVAVAAWKWLLDPRYGAVNQ
FLLSTGLIDRGIPFLSRTSTVWGAVETMLIWRELPFVIITFLAALQSIPRELREAARI
DGASEFQIHLRIILPMLKPVIAVVALLTTIWTFNNFVYVWLATRGGPGDYTQVLATKM
YTVSFVDYRVGEGAAIGVLMSLMMFAFALVYLGILSRGKRGASS"
misc_feature complement(234475..235329)
/locus_tag="Rleg_6793"
/note="ABC-type polysaccharide transport system, permease
component [Carbohydrate transport and metabolism]; Region:
LplB; COG4209"
/db_xref="CDD:33938"
misc_feature complement(234511..>234933)
/locus_tag="Rleg_6793"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(234511..234516,234523..234528,
234535..234540,234544..234549,234556..234561,
234589..234594,234637..234642,234649..234660,
234679..234681,234688..234693,234733..234735,
234784..234786,234793..234798,234808..234810,
234814..234819,234826..234828,234832..234834,
234844..234849,234922..234924,234928..234933))
/locus_tag="Rleg_6793"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(234559..234561,234589..234591,
234598..234600,234640..234642,234862..234864,
234922..234924))
/locus_tag="Rleg_6793"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(234712..234714,234724..234729,
234745..234783))
/locus_tag="Rleg_6793"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(235416..236708)
/locus_tag="Rleg_6794"
/db_xref="GeneID:8022724"
CDS complement(235416..236708)
/locus_tag="Rleg_6794"
/inference="protein motif:PFAM:PF01547"
/note="PFAM: extracellular solute-binding protein family
1;
KEGG: bcz:BCZK1634 sugar ABC transporter, sugar-binding
protein"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 1"
/protein_id="YP_002984795.1"
/db_xref="GI:241666711"
/db_xref="InterPro:IPR006059"
/db_xref="GeneID:8022724"
/translation="MFKNGIGRQLIFAATTAASMIFAVAPSAAQDKVQLTFRQFDPPT
EIQGLIAAVEAWNSSHPDVQVKLETMSGGDTLAQLAREIPAGAGPDVQQLAFVWTRDL
ARSKLLLDLSPLIQSNAPGAGTDDFLALDLATLDGKIFGLPWTADTFSMAYRPDLLQA
AGVSNFPDSWDDLAAAAKKLTTEGGGTEQYGFCFPAGSAPDSGMWTLVNYYLWSNGST
LVTEESPGKWKVAVTPEQLAAAMNYFNQFFVDGTAPENLITVNAWGDPELIGGLGRGD
CAITFFPPQTFRAAEKQSEKPLLTAPIPKGTEKRISHLGGRALGINPNTKHQKEAWEF
VKYLVGPETFKTYNQYPSQKSLLSQLQFPPAEQGYVTMLPLAQTFERYISSPIKVSSM
TALINREFGAVFSGQRNPDEAADVIIKELNDLLARGKG"
sig_peptide complement(236619..236708)
/locus_tag="Rleg_6794"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.821 at
residue 30"
misc_feature complement(235428..236693)
/locus_tag="Rleg_6794"
/note="ABC-type sugar transport system, periplasmic
component [Carbohydrate transport and metabolism]; Region:
UgpB; COG1653"
/db_xref="CDD:31839"
misc_feature complement(235683..236579)
/locus_tag="Rleg_6794"
/note="Bacterial extracellular solute-binding protein;
Region: SBP_bac_1; pfam01547"
/db_xref="CDD:201851"
gene 236954..237862
/locus_tag="Rleg_6795"
/db_xref="GeneID:8022725"
CDS 236954..237862
/locus_tag="Rleg_6795"
/inference="protein motif:PFAM:PF00126"
/note="PFAM: regulatory protein LysR; LysR
substrate-binding;
KEGG: bmj:BMULJ_03283 LysR family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002984796.1"
/db_xref="GI:241666712"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="InterPro:IPR013838"
/db_xref="GeneID:8022725"
/translation="MRELRQFVEVANQRSISRAAKKLNISQPALSRAIRQLEDSYGVP
LFNRTGAGVELSVYGSALYSRAVRILPALDEAKEEIEHLQGRAKAVIRIATGDLWGLV
ILPGIIKAFSRTHPGVVVHVEIADDGTRFEGMRHGVYDLVFGTLSYKYEAVMQVEFET
LARQATYIYCHKDHHLAKAATVTLDDLLRQRWISPGYGDDEGPGQLERQTRDFAVRVD
SMLQALLIMQGSPLVMAASSGFAKLFDGFGIRPVMFQDHGRVQESGAIYFPRALEKSP
VRDFLRLVRGSMPLLALPEFSLPETA"
misc_feature 236954..237808
/locus_tag="Rleg_6795"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature 236954..237130
/locus_tag="Rleg_6795"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 237221..237820
/locus_tag="Rleg_6795"
/note="LysR substrate binding domain; Region:
LysR_substrate; pfam03466"
/db_xref="CDD:202651"
misc_feature order(237266..237271,237275..237280,237287..237289,
237299..237301,237305..237325,237593..237610,
237626..237631,237635..237640)
/locus_tag="Rleg_6795"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene complement(237863..238345)
/locus_tag="Rleg_6796"
/db_xref="GeneID:8022726"
CDS complement(237863..238345)
/locus_tag="Rleg_6796"
/inference="protein motif:PFAM:PF00583"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: ret:RHE_PE00205 putative acetyltransferase protein;
SNP /replace=G"
/codon_start=1
/transl_table=11
/product="GCN5-related N-acetyltransferase"
/protein_id="YP_002984797.1"
/db_xref="GI:241666713"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:8022726"
/translation="MLIRPADKNDRSAIWRIIGPTIRAGETYALDRDLSEADALAYWM
GPDRETFVAEADGVILGTYYIKANQAGGGRHVCNCGYMTDAAASGRGVARLMHVNSLE
HARASGFRAMQFNFVVSSNERAVALWQSLGFDIVGRLPGVFLHPTQGYVDALVMFRTL
"
misc_feature complement(237866..238345)
/locus_tag="Rleg_6796"
/note="Acetyltransferases [General function prediction
only]; Region: RimI; COG0456"
/db_xref="CDD:30804"
misc_feature complement(237947..238189)
/locus_tag="Rleg_6796"
/note="Acetyltransferase (GNAT) family; Region:
Acetyltransf_1; pfam00583"
/db_xref="CDD:201324"
gene complement(238422..239627)
/locus_tag="Rleg_6797"
/db_xref="GeneID:8022727"
CDS complement(238422..239627)
/locus_tag="Rleg_6797"
/EC_number="2.3.1.174"
/inference="protein motif:TFAM:TIGR02430"
/note="catalyzes the thiolytic cleavage of
beta-ketoadipyl-CoA to succinate and acetyl-CoA"
/codon_start=1
/transl_table=11
/product="beta-ketoadipyl CoA thiolase"
/protein_id="YP_002984798.1"
/db_xref="GI:241666714"
/db_xref="InterPro:IPR002155"
/db_xref="InterPro:IPR012793"
/db_xref="GeneID:8022727"
/translation="MTEAFICDYIRTPIGRFAGSLSQVRADDLGAIPLKALMQRNAAV
DWEAVDDVIFGCANQAGEDNRNVARMSALLAGLPIAVPGTTINRLCGSGMDAVITAAR
AIRAGEAELMIAGGVESMSRAPFVMPKAETAFSRAAEIHDTTIGWRFVNPLMKKQYGV
DSMPETGENVAEDYHVSREDQDAFAVRSQAKAAAAQANGRLAKEITPVTISQRKGDPV
IVDKDEHPRATTIETLAKLATPFKKEGGTVTAGNASGVNDGAAALIVASEAAARKYGL
TPIARILGGAAAAVPPRVMGVGPIPASRKLMARLGMTADQFDVIELNEAFASQGLAVL
RALGIADDDARVNRNGGAIALGHPLGMSGARITGTAALELLQTGGQYSLSTMCIGVGQ
GIAIALKRV"
misc_feature complement(238425..239627)
/locus_tag="Rleg_6797"
/note="beta-ketoadipyl CoA thiolase; Validated; Region:
PRK09050"
/db_xref="CDD:181624"
misc_feature complement(238428..239615)
/locus_tag="Rleg_6797"
/note="Thiolase are ubiquitous enzymes that catalyze the
reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and...; Region: thiolase;
cd00751"
/db_xref="CDD:29411"
misc_feature complement(order(238455..238460,238701..238703,
238761..238763,238767..238769,238773..238775,
239265..239267,239310..239312,239319..239324,
239343..239345,239367..239378,239409..239411,
239421..239423,239430..239432,239475..239477,
239559..239561))
/locus_tag="Rleg_6797"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29411"
misc_feature complement(order(238467..238469,238557..238559,
239358..239360))
/locus_tag="Rleg_6797"
/note="active site"
/db_xref="CDD:29411"
gene complement(239637..240341)
/locus_tag="Rleg_6798"
/db_xref="GeneID:8022728"
CDS complement(239637..240341)
/locus_tag="Rleg_6798"
/EC_number="2.8.3.6"
/inference="protein motif:TFAM:TIGR02428"
/note="KEGG: rec:RHECIAT_PA0000155 3-oxoadipate
CoA-transferase protein, B subunit;
TIGRFAM: 3-oxoacid CoA-transferase, B subunit;
PFAM: coenzyme A transferase"
/codon_start=1
/transl_table=11
/product="3-oxoacid CoA-transferase, B subunit"
/protein_id="YP_002984799.1"
/db_xref="GI:241666715"
/db_xref="InterPro:IPR004165"
/db_xref="InterPro:IPR012791"
/db_xref="GeneID:8022728"
/translation="MTINTRPINTREDIKLSNAQIAWRAAQDIADGAYVNLGIGFPEM
VARYQPPGRQAIFHTENGILNFGEPPAAGEEDWDLINAGKKAVTLKPGAAFFHHADSF
AMVRGGHLDVAILGAYQVAQSGDLANWRVGSKGVPAVGGAMDLVHGAKQVCVITEHVT
KTGEPKLVETCTFPLTGVACITRVYTSHAVVDIVNGRFILREKLAAMSQEELQAMTGA
PLHVEGPVADLVVPKL"
misc_feature complement(239676..240296)
/locus_tag="Rleg_6798"
/note="3-oxoacid CoA-transferase, B subunit; Region:
pcaJ_scoB_fam; TIGR02428"
/db_xref="CDD:188219"
gene complement(240338..241045)
/locus_tag="Rleg_6799"
/db_xref="GeneID:8022729"
CDS complement(240338..241045)
/locus_tag="Rleg_6799"
/EC_number="2.8.3.6"
/inference="protein motif:TFAM:TIGR02429"
/note="KEGG: rec:RHECIAT_PA0000154 3-oxoadipate
CoA-transferase protein, A subunit;
TIGRFAM: 3-oxoacid CoA-transferase, A subunit;
PFAM: coenzyme A transferase"
/codon_start=1
/transl_table=11
/product="3-oxoacid CoA-transferase, A subunit"
/protein_id="YP_002984800.1"
/db_xref="GI:241666716"
/db_xref="InterPro:IPR004163"
/db_xref="InterPro:IPR004165"
/db_xref="InterPro:IPR012792"
/db_xref="GeneID:8022729"
/translation="MDKTVGSTAEAVSEIGDGATVMIGGFGGSGAPIELIHALIDKGS
KNLTVINNNAGNGRIGIAAMIDAGMVRKMICSFPRSSDPRAFTDKYLAGEIELELVPQ
GTLAERIRAGGAGIPAFYTPTAYGTELANGKVIAEFDGRHYVQERWLKADFAIVKAAI
GDIQGNLTYNKAGRNFNPLMCMAAAKTIVQVSSIVPAGGIDPEQVVTPGIFVDRVVTV
SNPQQEEELIRAGVAYV"
misc_feature complement(240383..241045)
/locus_tag="Rleg_6799"
/note="SugarP_isomerase: Sugar Phosphate Isomerase family;
includes type A ribose 5-phosphate isomerase (RPI_A),
glucosamine-6-phosphate (GlcN6P) deaminase, and
6-phosphogluconolactonase (6PGL). RPI catalyzes the
reversible conversion of ribose-5-phosphate to...; Region:
SugarP_isomerase; cl00339"
/db_xref="CDD:206995"
gene 241203..241961
/locus_tag="Rleg_6800"
/db_xref="GeneID:8022730"
CDS 241203..241961
/locus_tag="Rleg_6800"
/inference="protein motif:TFAM:TIGR02431"
/note="KEGG: ret:RHE_PE00200 IclR family transcriptional
regulator;
TIGRFAM: beta-ketoadipate pathway transcriptional
regulators, PcaR/PcaU/PobR family;
PFAM: Transcriptional regulator IclR ; regulatory protein
IclR;
SMART: regulatory protein IclR"
/codon_start=1
/transl_table=11
/product="IclR family transcriptional regulator"
/protein_id="YP_002984801.1"
/db_xref="GI:241666717"
/db_xref="InterPro:IPR005471"
/db_xref="InterPro:IPR012794"
/db_xref="InterPro:IPR014757"
/db_xref="GeneID:8022730"
/translation="MRETDFVSGFARGLKVIEAFGETRQRLSIAEAAKLTELDRATVR
RSLLTLAELGYADYDGKFFTLTPKILRLGHAYLAATPLPALLQPHLDLLSEKAGQSAS
ASVLDGTDIVYIARASQRRVMSINLTPGSRLPAYCASMGRVLLAALSESEARAILARS
ELKQNTPNTKTDPEDLITEFRRVRTDGYAIIDQELEIGLCSIAVPVDNDRGETVAAIN
IGAPAALVPAAEMKERYLPLLKETQAALRPLLRR"
misc_feature 241209..241952
/locus_tag="Rleg_6800"
/note="beta-ketoadipate pathway transcriptional
regulators, PcaR/PcaU/PobR family; Region: pcaR_pcaU;
TIGR02431"
/db_xref="CDD:131484"
misc_feature 241233..241382
/locus_tag="Rleg_6800"
/note="IclR helix-turn-helix domain; Region: HTH_IclR;
pfam09339"
/db_xref="CDD:150115"
misc_feature 241563..241943
/locus_tag="Rleg_6800"
/note="Bacterial transcriptional regulator; Region: IclR;
pfam01614"
/db_xref="CDD:201890"
gene 241982..242128
/locus_tag="Rleg_6801"
/pseudo
/db_xref="GeneID:8022731"
gene 242244..243167
/locus_tag="Rleg_6802"
/db_xref="GeneID:8022732"
CDS 242244..243167
/locus_tag="Rleg_6802"
/inference="protein motif:PFAM:PF01022"
/note="PFAM: regulatory protein ArsR;
SMART: regulatory protein ArsR;
KEGG: rec:RHECIAT_PA0000152 probable transcriptional
regulator protein, ArsR family"
/codon_start=1
/transl_table=11
/product="ArsR family transcriptional regulator"
/protein_id="YP_002984802.1"
/db_xref="GI:241666718"
/db_xref="InterPro:IPR001845"
/db_xref="GeneID:8022732"
/translation="MERSFLTIAAGENNDAIRALSAPARLEMLKLLCAKGPMNINDIA
RALSLPQSTVATGIQILEDARLVDSQLTKARKGNQKICSAIYSEILISFEESAAQRAN
NIIEVEMPVGLYTSCDVHAPCGLCSTESVIGPLDVPDYFLDPQRMQAGLVWFGRGYVE
YKFPNNAKVLNKDIRAIEFSLELSSEVPGTNPDWPSDITLWVNGMAIGTWTSPGDYGD
KRGAFTPAWWKLEGSQYGMMKTWRISTRGTFIDGIAASNVTLSDLALAQHSSIRLRVG
IAENAGHTGGVNIFGRSFGNHGRDIIMRLHV"
misc_feature 242244..243161
/locus_tag="Rleg_6802"
/note="Predicted transcriptional regulator
[Transcription]; Region: COG4189"
/db_xref="CDD:33924"
misc_feature 242292..>242471
/locus_tag="Rleg_6802"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature order(242292..242297,242301..242303,242310..242312,
242319..242324,242331..242336,242346..242348,
242436..242438)
/locus_tag="Rleg_6802"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:28974"
misc_feature order(242295..242300,242310..242318,242358..242366,
242391..242402,242406..242411,242418..242423,
242427..242432,242448..242456,242469..242471)
/locus_tag="Rleg_6802"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
misc_feature order(242358..242360,242367..242369)
/locus_tag="Rleg_6802"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
gene 243378..244886
/locus_tag="Rleg_6803"
/db_xref="GeneID:8022733"
CDS 243378..244886
/locus_tag="Rleg_6803"
/EC_number="3.2.1.55"
/inference="protein motif:PRIAM:3.2.1.55"
/note="PFAM: alpha-L-arabinofuranosidase domain protein;
KEGG: ret:RHE_PE00195 alpha-L-arabinofuranosidase protein;
SNP /replace=A;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="Alpha-N-arabinofuranosidase"
/protein_id="YP_002984803.1"
/db_xref="GI:241666719"
/db_xref="InterPro:IPR010720"
/db_xref="GeneID:8022733"
/translation="MKTNVVVHRDFRIATIDSRLYSSFLEHLGRAIYGGIYEPGHPTA
DEDGFRQDVLDLVRDLDTPYCRYPGGNFVSAYNWEDGVGPRAERPVRLDLAWRTREAN
QIGVNEFVDWCKKANTKPMLAVNLGSRGLDAARNFLEYCNHPGGTYWSDLRRKHGWSN
PHDVKLWCLGNEMDGPWQVGHKSAYEYGRLADETAKAMRGFDKSLELVVCGSSNSDMK
TYPEWEAQVLEQCYDSADHISLHMYFANREKNTLNYLARATKLDRYITTIGGVIDYIK
AKKRSKKTIGISFDEWNVWYHSNQQDKEILARDEWPDAPHLLEDIYNFEDVLQVGGIL
NTFIRRSDRVRIACIAQLVNVIAPIMTEDGGAAWRQTIYYPFYYASRYGRGTALQLVV
DGPTYDSDEENDVPYLDVSAVHSEDGKTLTFFAVNRHPSTALDLDVRLEGFGNARVVE
QVEMTHGDLEAVNTAVRPKTVAPVNVESGKIEDGRLRAALKPFSYNVIRLSV"
misc_feature 243378..244883
/locus_tag="Rleg_6803"
/note="Alpha-L-arabinofuranosidase [Carbohydrate transport
and metabolism]; Region: AbfA; COG3534"
/db_xref="CDD:33336"
misc_feature 244245..244859
/locus_tag="Rleg_6803"
/note="Alpha-L-arabinofuranosidase C-terminus; Region:
Alpha-L-AF_C; pfam06964"
/db_xref="CDD:203553"
gene 245090..246994
/locus_tag="Rleg_6804"
/db_xref="GeneID:8022734"
CDS 245090..246994
/locus_tag="Rleg_6804"
/inference="protein motif:PFAM:PF00496"
/note="PFAM: extracellular solute-binding protein family
5;
KEGG: ret:RHE_PE00194 oligopeptide ABC transporter,
ATP-binding protein"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 5"
/protein_id="YP_002984804.1"
/db_xref="GI:241666720"
/db_xref="InterPro:IPR000914"
/db_xref="GeneID:8022734"
/translation="MQQWKRLAFGVALAALGLTATAKADDYTSLPRKETLIVENPEGT
IKNPGWFNIWVNGGGGVSTGLQQLTMDTLWYIDPEQGLGGATWDNSLAADKPQYNADF
TEMTVKLRKGLFWSDGVEFTADDVVYTVKTQMDHPGMVWSAAFSVQVASVEATDPSTV
VFKLKKPNSRFHAIFTVRWNGAWIMPKHVFEKVEDPLRYDFANPVSLGAYKLKSYDPQ
GKWYTWEKRDDWQRTSLARFGEPAPKYVTYADPGPPDKRTIAQLEHNLDIIHDNTPEG
MFTLKEKSKTIETWFPGFPFAHPDPTLPAVIFNTQNPPFDNADVRWALALLIDIKAVD
MASYRGAATLSALGVPPTAATMKDYQAPMQDWLKNFEIDTGKSKIKPYDPTVGQQIAD
ILRKQPKFKDQIPTDAEAISGAFGYGWWKPDPKAAGELLEKAGFKKSGGKWLTPDGQP
FKIRMTVEGDTRSVFTRAGTLIAQQWAAFGIDAKAVPAAKLWQTALQPGDFQVAIAWS
VETWGGDPDLSFFLDSWHSQFVAKKGDNQPPRNWQRWSNPELDKIIESIRGISADDPK
GVELGKDYLKLVAREMPTIPLMSYNVFTSMDTTYWTGYPTIADPYTDPVPNWANSRLM
MVKLKPAQPK"
sig_peptide 245090..245164
/locus_tag="Rleg_6804"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.945 at
residue 25"
misc_feature 245192..246922
/locus_tag="Rleg_6804"
/note="The substrate binding domain of a cellulose-binding
protein from Thermotoga maritima contains the type 2
periplasmic binding fold; Region:
PBP2_TmCBP_oligosaccharides_like; cd08509"
/db_xref="CDD:173874"
misc_feature order(245207..245209,245897..245899,246623..246625,
246866..246868)
/locus_tag="Rleg_6804"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173874"
misc_feature 245216..246931
/locus_tag="Rleg_6804"
/note="ABC-type dipeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
DdpA; COG0747"
/db_xref="CDD:31090"
gene 247108..248112
/locus_tag="Rleg_6805"
/db_xref="GeneID:8022735"
CDS 247108..248112
/locus_tag="Rleg_6805"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: rec:RHECIAT_PA0000149 putative ABC transporter,
permease protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984805.1"
/db_xref="GI:241666721"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022735"
/translation="MTSYLIFVLKRFGQFLLVVFLGVTITFFVTHLTPIDPVEESIGA
ITQMGQSDPNAIELMRQSLRELYGMEGSIWQQYLHFWLRLATGDLGPSLSAFPTPVST
IILRSLPWTIGLMTVSTLITFVLGNAIGALAGYYRKDMVLKAVSLVFIALLPIPYYIL
AFVLLIVFGYLWPVLPINGGYEMNANLDLSFALVFDILKHSILPALSLIMVGAGSWLI
GMRALVSNIITEDYVVFAELGGVPKRKILRSYIARNAMVPQFTGLAMSLGAIFNGTVI
TEIVFGYPGIGNLLIEAVHAGDYSLVLGLSALSIVGVAAAVFIIDILSPLIDPRIKVE
"
misc_feature 247120..248109
/locus_tag="Rleg_6805"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppB; COG0601"
/db_xref="CDD:30946"
misc_feature 247429..248046
/locus_tag="Rleg_6805"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(247477..247482,247489..247494,247507..247509,
247540..247551,247555..247584,247591..247596,
247600..247602,247738..247743,247747..247749,
247753..247755,247762..247767,247771..247773,
247783..247788,247795..247797,247846..247848,
247888..247893,247900..247902,247921..247932,
247939..247944,247969..247974,248002..248007,
248014..248019,248023..248028,248035..248040)
/locus_tag="Rleg_6805"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(247558..247602,247921..247938)
/locus_tag="Rleg_6805"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(247600..247602,247723..247725,247939..247941,
247963..247965,247972..247974,248002..248004)
/locus_tag="Rleg_6805"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(247798..247836,247852..247857,247867..247869)
/locus_tag="Rleg_6805"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 248116..248973
/locus_tag="Rleg_6806"
/db_xref="GeneID:8022736"
CDS 248116..248973
/locus_tag="Rleg_6806"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: rec:RHECIAT_PA0000148 probable oligopeptide ABC
transporter, permease protein;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984806.1"
/db_xref="GI:241666722"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022736"
/translation="MFTIVRDLARQNMEFLCGLLLFAVIVALIVVSYFSPYGATDIYL
LPPDMPPDGEYWLGTTSRGQDVFWQLTTALRNTLFFGIGVAFISRIISLVVGLVAGYA
GGAVDRVLMAINDSVMVIPQFPLLILFYFVLKDSMTWTALILIMAALGWSYDARLIRS
VAISLKTRSFTTQSVYSGMSMRKILVEEHLPYVLPIVFATTMNNMIWSIGMEITLSVL
GFTDIETPTMGMMIYWANAHSALISGIWWWVAAPVAVIVVLFLALFLLSMSMNEYNDP
RSRLNRMGS"
misc_feature 248212..248952
/locus_tag="Rleg_6806"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppC; COG1173"
/db_xref="CDD:31366"
misc_feature 248335..248820
/locus_tag="Rleg_6806"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(248383..248388,248395..248400,248413..248415,
248443..248454,248458..248487,248494..248499,
248503..248505,248560..248565,248569..248571,
248575..248577,248584..248589,248593..248595,
248605..248610,248617..248619,248668..248670,
248710..248715,248722..248724,248743..248754,
248761..248766,248803..248808)
/locus_tag="Rleg_6806"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(248461..248505,248743..248760)
/locus_tag="Rleg_6806"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(248503..248505,248545..248547,248761..248763,
248797..248799,248806..248808)
/locus_tag="Rleg_6806"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(248620..248658,248674..248679,248689..248691)
/locus_tag="Rleg_6806"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 248975..249964
/locus_tag="Rleg_6807"
/db_xref="GeneID:8022737"
CDS 248975..249964
/locus_tag="Rleg_6807"
/inference="protein motif:TFAM:TIGR01727"
/note="KEGG: rec:RHECIAT_PA0000147 probable oligopeptide
ABC transporter, ATP-binding protein;
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase
subunit;
PFAM: ABC transporter; Oligopeptide/dipeptide ABC
transporter domain protein;
SMART: AAA ATPase;
SNP /replace=T"
/codon_start=1
/transl_table=11
/product="oligopeptide/dipeptide ABC transporter, ATPase
subunit"
/protein_id="YP_002984807.1"
/db_xref="GI:241666723"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR010066"
/db_xref="InterPro:IPR013563"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022737"
/translation="MDPLVEIENLKAYYRAFLYGVDREVRAVDDISLTIARGEVYGVA
GESSSGKTTLIKTIAGAIRPPLRVVSGKVTFHFDGGTQDIYAMKPEDRLALRWKHLSY
IMQGSMNVLNPVRRIRHSFTDFAFRHMKVSGPVFLERVATHLQRLKLDPHLLDAYPHE
LSGGMRQRMTIALATILTPEFIIADEPTTALDVIVQRDVLSMIREIQREMGSSFLFVT
HDMGVHATVSDRIGIVYAGRLVEEAPTAKLFNKPLHPYTQHLVGSLPRIGDATARPSL
EGRPPNLAMPPEGCRFHPRCPKRMEICSQKVPPLVTVEPQRRVACFAVTGDQV"
misc_feature 248984..249940
/locus_tag="Rleg_6807"
/note="ABC-type dipeptide/oligopeptide/nickel transport
system, ATPase component [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppD; COG0444"
/db_xref="CDD:30793"
misc_feature 248984..249703
/locus_tag="Rleg_6807"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature 249107..249130
/locus_tag="Rleg_6807"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(249116..249121,249125..249133,249287..249289,
249527..249532,249629..249631)
/locus_tag="Rleg_6807"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 249278..249289
/locus_tag="Rleg_6807"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 249455..249484
/locus_tag="Rleg_6807"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 249515..249532
/locus_tag="Rleg_6807"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 249539..249550
/locus_tag="Rleg_6807"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 249617..249637
/locus_tag="Rleg_6807"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
misc_feature 249686..249943
/locus_tag="Rleg_6807"
/note="Oligopeptide/dipeptide transporter, C-terminal
region; Region: oligo_HPY; cl07097"
/db_xref="CDD:214141"
gene 249961..250773
/locus_tag="Rleg_6808"
/db_xref="GeneID:8022738"
CDS 249961..250773
/locus_tag="Rleg_6808"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: AAA ATPase;
KEGG: rec:RHECIAT_PA0000146 probable ABC transporter,
ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984808.1"
/db_xref="GI:241666724"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022738"
/translation="MSALLSLSHVTKVYRQGGMLGRRLITAVKDVSFELGAEPEILSI
VGESGSGKSTIAAMILGQTEPTEGELQFSGRTVAIHSRSERKAFMKEVQPVLQNPFEA
FNPLKRVDRYLFETARNFSFSGNRPDREQAEKMADAALVHVGLTLEEVKGRFPHELSG
GQLQRVAIARALIPQPRLLVADEPVSMVDASLRMAIVNLFGRLKNELGLSIVYITHDL
ATAYYISDNIIIMRKGEIVERGQARAVLDDPQHEYSRALKDAVLAADFSAAV"
misc_feature 249964..250764
/locus_tag="Rleg_6808"
/note="ABC-type dipeptide/oligopeptide/nickel transport
system, ATPase component [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppF; COG1124"
/db_xref="CDD:31321"
misc_feature 249970..250680
/locus_tag="Rleg_6808"
/note="ATP-binding cassette domain of nickel/oligopeptides
specific transporters; Region: ABC_NikE_OppD_transporters;
cd03257"
/db_xref="CDD:213224"
misc_feature 250096..250119
/locus_tag="Rleg_6808"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(250105..250110,250114..250122,250249..250251,
250504..250509,250606..250608)
/locus_tag="Rleg_6808"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 250240..250251
/locus_tag="Rleg_6808"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 250432..250461
/locus_tag="Rleg_6808"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 250492..250509
/locus_tag="Rleg_6808"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 250516..250527
/locus_tag="Rleg_6808"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 250594..250614
/locus_tag="Rleg_6808"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
gene 250880..253123
/locus_tag="Rleg_6809"
/db_xref="GeneID:8022739"
CDS 250880..253123
/locus_tag="Rleg_6809"
/inference="protein motif:TFAM:TIGR00254"
/note="KEGG: ret:RHE_CH02148 putative sensory box/GGDEF
family protein;
TIGRFAM: diguanylate cyclase;
PFAM: EAL domain protein; CHASE domain protein; GGDEF
domain containing protein;
SMART: EAL domain protein; GGDEF domain containing
protein"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase/phosphodiesterase with Chase
sensor"
/protein_id="YP_002984809.1"
/db_xref="GI:241666725"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR001633"
/db_xref="InterPro:IPR006189"
/db_xref="GeneID:8022739"
/translation="MKFRSNLARSVISHTSAFAPAIFAAIIATIVVWVATNWRLERSL
ADERSIVAGELATISSRLQTNLNSNVKLLQGLAAGIAVNPEMGQNGFSKLAAQILQPD
SQLRSFAAAPDLVVSWVYPEKGNEKAVGLDYRNNEKQRAAAMLARNTHNIVLTGPVEL
VQGGTAFVVRCPVYINTGTSQVFWGLLSGIVDIPKLYQESGLASTELEIAISTVPEPN
SPKQVFFGSLATFSSKPVQTSVDMVYGRWTLAALPKQGWGQNSGIGIFEFYASLLALC
VVAPIVWIGFLTGSRQRTIEKLRLHKKKLVRARQRLEHLSLHDALTGLPNRRFVDRMI
SQPPRPRPQDCLIFIHIDLDRFKEINDTRGHAGGDAVLQATASRLADLVGPNDVAARI
GGDEFIFASWSADPEPKATALARQIVDTLDQPLIIDDAACVVGASVGVAWETERALGP
DLGQLLLNADLALYEAKKAGRGRAAVFTEELRSAAIHSKELADEFKQALDRDELVAFF
QPQFDANTLDLAGVETLARWDHPQKGLLAPDKFLDVAEKLGRTGDMDRLILQKALFEL
TRWDSLGMQIPRVSVNISARRLAQPNLLAELSELPIAKGRLCFELLETISFNDLQPVL
KEIIPAVKKLGIEIEIDDFGTEHASIVSLLRFEPRRLKIDREIIKPIVASPSQRRLVS
SIIEIGRSQNIDIVAEGVETMDHAKILKDLGCHILQGYALARPMTSEQLIEFYCVKDK
GMTEAGR"
sig_peptide 250880..250984
/locus_tag="Rleg_6809"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.982) with cleavage site probability 0.820 at
residue 35"
misc_feature 251021..251755
/locus_tag="Rleg_6809"
/note="CHASE domain; Region: CHASE; cl01369"
/db_xref="CDD:207388"
misc_feature 251786..252310
/locus_tag="Rleg_6809"
/note="c-di-GMP synthetase (diguanylate cyclase, GGDEF
domain) [Signal transduction mechanisms]; Region:
COG2199"
/db_xref="CDD:32381"
misc_feature 251828..252298
/locus_tag="Rleg_6809"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature order(251933..251935,252062..252064)
/locus_tag="Rleg_6809"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(251948..251950,251957..251962,251972..251974,
251984..251986,252050..252052,252056..252067)
/locus_tag="Rleg_6809"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(252038..252040,252125..252127)
/locus_tag="Rleg_6809"
/note="I-site; other site"
/db_xref="CDD:143635"
misc_feature 252359..253069
/locus_tag="Rleg_6809"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cd01948"
/db_xref="CDD:30163"
gene complement(253207..256503)
/locus_tag="Rleg_6810"
/db_xref="GeneID:8022740"
CDS complement(253207..256503)
/locus_tag="Rleg_6810"
/inference="protein motif:TFAM:TIGR02768"
/note="TIGRFAM: Ti-type conjugative transfer relaxase
TraA;
PFAM: MobA/MobL protein;
KEGG: traA; Ti-type conjugative transfer relaxase TraA"
/codon_start=1
/transl_table=11
/product="Ti-type conjugative transfer relaxase TraA"
/protein_id="YP_002984810.1"
/db_xref="GI:241666726"
/db_xref="InterPro:IPR005053"
/db_xref="InterPro:IPR014136"
/db_xref="GeneID:8022740"
/translation="MAIYHLSMKPIARSAGRSAVASAAYRAAERLTNERDGLTHDFSN
RTGVEHAEIVLPVRSSAYWAMKRSALWNAAERAEKRSDARIAREFEIALPHELSSDQR
LVLTRAFAEDLANRYGAAVDFAIHRPGEGSDIRNSHAHLMMTTREVRETGLGDKTLLE
RENRWLLANHLPPSQLQLKDLRQAWEHLANTHLERAGLDIRIDHRSHLEAGITIEPSE
HVGVHATEINRQGGAVSRVRISPQSADRNAEIIRRRPEEILKLITNEKSVFNRYDIAR
ALHRTINDDAQTFQNAFASVMASKALVELRPDSSSLRGRDGEARYSTVEMVAIEGAMA
TATVAMKTRQNHGVFKRNVDAAIADQDRSIQAGNPSPGQGLSAEQRQAIEHVTGPGQI
AVVIGFAGAGKSTMLAAARQAWEAQGYRVHGAALAGKAAEGLEQSSGISSRTLASWEY
SWQADRGRLNARDVFVIDEGGMVGSRQIARFVDEVRRAGAKLVLVGDHEQLQAIGAGA
PFRAIAEAVGHAQLSEVRRQRTDWQKQASIDFASHRTADGLAAYQAHGNIQLKANRDD
VLKAIIADYVADRSANPNDTRIAMAHRRDDVRAINAGIRSRLQERGELSRSTGTSDDR
GEELTYQTSNGKRSFARGDRIVFLENDRDLGVKNGMLGEVIAVQPDAIQVRLDGKAQT
QDGQRQVIIPVNSYQAFDHGYATTIHKTQGATVDRSFVLASTTMDRHLTYVAMTRHRE
GVQLYAGLDAFKTLRSLTETLSRSGVKETTLDYTHDFANRRGMEDRRGQGEGEVAPAV
ITKEAERIADTAVPKPTQEPRPPTPLAARSIADGGSSHQDPNVDERRDERRVLIAAVK
TYAMSVEAVGQSKAMPAFERDWEAAKQLAPQVFKDARAAMDVLRGRILDENADPVALA
NQLSTSPETIGALAGKTGLFGDNAERKHALSRIDALASHVRQSANTWQRRLAAECGSE
RWKREKQDAVEVLGPSRRSEALLRQLDDLPYSDKAKFVERLAATPEGRQALAEAKDIA
TAIETRFGRADPSDRADQLKRAGPDQAGDIERIREVARLADRSHRAELTRQMELKRSL
KRGKSLGLGM"
misc_feature complement(254158..256503)
/locus_tag="Rleg_6810"
/note="Ti-type conjugative transfer relaxase TraA; Region:
TraA_Ti; TIGR02768"
/db_xref="CDD:163008"
misc_feature complement(255814..256419)
/locus_tag="Rleg_6810"
/note="MobA/MobL family; Region: MobA_MobL; pfam03389"
/db_xref="CDD:112214"
misc_feature complement(254827..255384)
/locus_tag="Rleg_6810"
/note="AAA domain; Region: AAA_30; pfam13604"
/db_xref="CDD:205782"
misc_feature complement(254278..254589)
/locus_tag="Rleg_6810"
/note="Family description; Region: UvrD_C_2; pfam13538"
/db_xref="CDD:205716"
gene 256783..257094
/locus_tag="Rleg_6811"
/db_xref="GeneID:8022823"
CDS 256783..257094
/locus_tag="Rleg_6811"
/inference="similar to AA sequence:KEGG:Arad_15021"
/note="KEGG: mobilization protein C"
/codon_start=1
/transl_table=11
/product="mobilization protein C"
/protein_id="YP_002984811.1"
/db_xref="GI:241666727"
/db_xref="InterPro:IPR001412"
/db_xref="GeneID:8022823"
/translation="MTVVRKTIGERLAQLEAQRQTLQIRLGKQERAIDTRRKVLIGAL
VLHRLENDRDVQIGGLAAWLRSELPKFLTRDGDRDLFDDLLKPQANEPTIGNIGSGSA
V"
gene 257094..257672
/locus_tag="Rleg_6812"
/db_xref="GeneID:8022395"
CDS 257094..257672
/locus_tag="Rleg_6812"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: traG; Ti-type conjugative transfer system
protein TraG ; K03205 type IV secretion system protein
VirD4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984812.1"
/db_xref="GI:241666728"
/db_xref="GeneID:8022395"
/translation="MIHAIKIKTALANMMRMAARDPLWAIVALITFPLRYAKSFVMGA
AGYLFVVFTVYFGIDYFRRVMLGGHRGDVIWHIGDWVVILFAVVLLIRLLSVPLITHF
GSAMDDTHGSARFAGRREIAPLTKAGSGLPASGRSLRRSCAIMPIRNSSDCLASRTDK
AGEMNQAVHITPMNRSARVLDAFAVAAAEDPS"
gene complement(257694..258950)
/locus_tag="Rleg_6813"
/db_xref="GeneID:8022396"
CDS complement(257694..258950)
/locus_tag="Rleg_6813"
/inference="protein motif:TFAM:TIGR03071"
/note="TIGRFAM: HipA N-terminal domain protein;
PFAM: HipA domain protein;
KEGG: smd:Smed_5805 HipA domain protein"
/codon_start=1
/transl_table=11
/product="HipA N-terminal domain protein"
/protein_id="YP_002984813.1"
/db_xref="GI:241666729"
/db_xref="InterPro:IPR012893"
/db_xref="InterPro:IPR012894"
/db_xref="InterPro:IPR017508"
/db_xref="GeneID:8022396"
/translation="MAKMFQAPNAIPSLEVLLNDLKVGTLVRTPGDFNAFSFDEAYRA
TGGFPVLSLSFRAATGGLRKDPKPIAGALPAFFANLLPEDKLREAMEKHHAGHVRASN
DFDLLAALGQDLPGAVRVVPSGGTTAVIEDASSGKPKARFSLAGVQMKLSVMKNTGRG
GGLTLPMGDEQGHYIAKFPSTSFPGVSENEYANLALAAAIGMEVPERELVEKSDFEGI
PEEFDTLSDGKVLLVKRFDRGAGAERIHIEDFAQVFGIYPSRKYEAAAYHDIASALGV
AISPTAALEFVRRLAFTAITGNGDMHLKNWSLIYRGNGDKPELAPIYDVLSTVPYIPA
DAMALSLGGERSFKALVAQRWKIFANRARLPEPAVLKAVIDVVERVNRHWWSLPERAV
VPEKVLERIDEHVKVMTPVLSSCANQ"
misc_feature complement(258588..258911)
/locus_tag="Rleg_6813"
/note="HipA N-terminal domain; Region: Couple_hipA;
pfam13657"
/db_xref="CDD:205834"
misc_feature complement(257805..258722)
/locus_tag="Rleg_6813"
/note="Toxin module HipA, protein kinase of
phosphatidylinositol 3/4-kinase superfamily [General
function prediction only]; Region: HipA; COG3550"
/db_xref="CDD:33352"
misc_feature complement(258237..258524)
/locus_tag="Rleg_6813"
/note="HipA-like N-terminal domain; Region: HipA_N;
pfam07805"
/db_xref="CDD:203767"
misc_feature complement(257979..258221)
/locus_tag="Rleg_6813"
/note="HipA-like C-terminal domain; Region: HipA_C;
pfam07804"
/db_xref="CDD:203766"
gene complement(258943..259251)
/locus_tag="Rleg_6814"
/db_xref="GeneID:8022397"
CDS complement(258943..259251)
/locus_tag="Rleg_6814"
/inference="protein motif:PFAM:PF01381"
/note="PFAM: helix-turn-helix domain protein;
SMART: helix-turn-helix domain protein;
KEGG: pde:Pden_1547 XRE family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_002984814.1"
/db_xref="GI:241666730"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:8022397"
/translation="MIPDSAALLQIGRLLKKARQASAMTQEQVADLAGISRPRYRDIE
TGVAAARATTLLNVARALGLEMMMIPQAMVPAVEALLRPHDDDDLPAFISRPDDNDHG
"
misc_feature complement(<259054..259224)
/locus_tag="Rleg_6814"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:31586"
misc_feature complement(259054..259218)
/locus_tag="Rleg_6814"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature complement(order(259117..259119,259192..259194,
259204..259206))
/locus_tag="Rleg_6814"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature complement(order(259120..259122,259195..259197))
/locus_tag="Rleg_6814"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature complement(order(259114..259119,259129..259131,
259138..259140,259171..259176))
/locus_tag="Rleg_6814"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene 259681..259926
/locus_tag="Rleg_6815"
/db_xref="GeneID:8022398"
CDS 259681..259926
/locus_tag="Rleg_6815"
/inference="protein motif:PFAM:PF05406"
/note="PFAM: WGR domain protein;
SMART: WGR domain protein;
KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="WGR domain protein"
/protein_id="YP_002984815.1"
/db_xref="GI:241666731"
/db_xref="InterPro:IPR008893"
/db_xref="GeneID:8022398"
/translation="MTVQPYRLYIERIDPSKNMARFYALSIEPNLFGETSLVRSWGRI
GSRGQQKIHVFDSEAKAVDLLLTLLRRKRSRGYRVLQ"
misc_feature 259699..259917
/locus_tag="Rleg_6815"
/note="WGR domain of molybdate metabolism regulator and
related proteins; Region: WGR_MMR_like; cd07996"
/db_xref="CDD:153425"
gene complement(259989..260909)
/locus_tag="Rleg_6816"
/db_xref="GeneID:8022399"
CDS complement(259989..260909)
/locus_tag="Rleg_6816"
/inference="protein motif:PFAM:PF08401"
/note="PFAM: domain of unknown function DUF1738;
KEGG: rec:RHECIAT_PB0000154 probable DNA conjugal transfer
antirestriction protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984816.1"
/db_xref="GI:241666732"
/db_xref="InterPro:IPR013610"
/db_xref="GeneID:8022399"
/translation="MSRQQSNQRTDIHSRITNTIIADLERGVRPWTKPWTTGHAASEV
SRPLRHNGQPYSGINVLLLWSEAIARGFASSRWMTFRQAIELGGAVRKGETGTTVVFA
SSFVRTETTETGTEIEQDIPFLKAYTVFNTDQIAGLDGRFDEIAPHQDPMSRIGDAGR
FFANTGALIRHGGSAAYYAAQRDYIQMPCLDAFRDDASYVAVLSHEITHWTAAPRRLD
RDLSRYAKDRSERAREELIAELGSAFLCADLGIVPELEPRPDHARYLDGWLKVLDHDK
RAIFSAAAYAQRAVDYLHSLQPELDEEEAA"
misc_feature complement(260001..260909)
/locus_tag="Rleg_6816"
/note="Antirestriction protein [DNA replication,
recombination, and repair]; Region: COG4227"
/db_xref="CDD:33952"
misc_feature complement(260520..260885)
/locus_tag="Rleg_6816"
/note="Domain of unknown function (DUF1738); Region:
DUF1738; pfam08401"
/db_xref="CDD:192027"
gene complement(261267..262196)
/locus_tag="Rleg_6817"
/db_xref="GeneID:8022400"
CDS complement(261267..262196)
/locus_tag="Rleg_6817"
/inference="protein motif:TFAM:TIGR00254"
/note="KEGG: rec:RHECIAT_PA0000115 putative sensory
box/GGDEF family protein;
TIGRFAM: diguanylate cyclase;
PFAM: GGDEF domain containing protein;
SMART: GGDEF domain containing protein"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase"
/protein_id="YP_002984817.1"
/db_xref="GI:241666733"
/db_xref="InterPro:IPR000160"
/db_xref="GeneID:8022400"
/translation="MSCKGNQAVFGMDEIFEQLLHLSGRTETLIAVYDGHDRLRYANS
AFRSVYFIEPDEIPLWPDLMRRNFELARGTVIRTSNFDEWLRSTQSRRGKIGYRAFET
DLCDGRWFWMTEAVQKNGWMLCIASDITSLRVHGRTVRQDRDQAIKASYTDELTGVAN
RRFVMARVDDMLTAARHGNNGCLAVFDIDNFKHINDRLGHHAGDVVLRDFAHRIHQNV
RRSDCFGRIGGEEFLLVMPATGPEDAIAMVECMLTVIRFSRPLPESPDFSYTCSAGIA
ACASSDSASELYRRADQALYAAKLSGRDRVRAA"
misc_feature complement(261276..261746)
/locus_tag="Rleg_6817"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature complement(order(261507..261509,261636..261638))
/locus_tag="Rleg_6817"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(261504..261515,261519..261521,
261585..261587,261597..261599,261609..261614,
261621..261623))
/locus_tag="Rleg_6817"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(261447..261449,261531..261533))
/locus_tag="Rleg_6817"
/note="I-site; other site"
/db_xref="CDD:143635"
gene 262370..262804
/locus_tag="Rleg_6818"
/db_xref="GeneID:8022401"
CDS 262370..262804
/locus_tag="Rleg_6818"
/inference="similar to AA sequence:KEGG:RHE_PC00121"
/note="KEGG: ret:RHE_PC00121 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984818.1"
/db_xref="GI:241666734"
/db_xref="GeneID:8022401"
/translation="MEQYALDQLKTIATVSPTCKRLEITRRERLERWAESLERSPRPF
LKTLHETEYQPISDRLALRDDGTPISVAFADPILRAAGMENDSYGEAKRFFELSDEQL
HDLVCFCHFGERVSAAVVARRLRKMSGSKPSGFFAQLRAFFG"
gene 263259..263564
/locus_tag="Rleg_6819"
/db_xref="GeneID:8022402"
CDS 263259..263564
/locus_tag="Rleg_6819"
/inference="similar to AA sequence:KEGG:Arad_8043"
/note="KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984819.1"
/db_xref="GI:241666735"
/db_xref="GeneID:8022402"
/translation="MDEADRWRHMASAPKDGSRILVTIRPSEQGPAEVDLAYWSNGDQ
FAGEGWRASDSSPGQIIEYADPELKCWMPMPSANLGRTSIPPPWEGDDDRNLDGSGI"
gene 263838..264518
/locus_tag="Rleg_6820"
/db_xref="GeneID:8022403"
CDS 263838..264518
/locus_tag="Rleg_6820"
/inference="protein motif:PFAM:PF00565"
/note="PFAM: nuclease (SNase domain protein);
SMART: nuclease (SNase domain protein);
KEGG: rde:RD1_A0063 succinoglycan biosynthesis protein
ExoI"
/codon_start=1
/transl_table=11
/product="nuclease (SNase domain protein)"
/protein_id="YP_002984820.1"
/db_xref="GI:241666736"
/db_xref="InterPro:IPR006021"
/db_xref="GeneID:8022403"
/translation="MTNTKFRHTGWMIVIILFAIGAFPLESTAATVRVIDGDTILVDQ
ITVRLDGIDAPEAGQKCASLSGRDWPCGKVAIAAMEELVASGDVVCDDRGVDIYQRQL
GVCRVGKREINAEMVASGNAWAFRKYSTDYVTLEERAHNEHLGIWQASTIPAWEYRAD
RWNVAEQQAPKGCPIKGNISENGHIYHAPWSPWYDRTKVDTKKGERWFCDEAQALKAG
WRAPQWGH"
sig_peptide 263838..263927
/locus_tag="Rleg_6820"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.988) with cleavage site probability 0.914 at
residue 30"
misc_feature 263913..264278
/locus_tag="Rleg_6820"
/note="Staphylococcal nuclease homologues; Region: SNc;
smart00318"
/db_xref="CDD:197650"
misc_feature 263934..264278
/locus_tag="Rleg_6820"
/note="Staphylococcal nuclease homologues. SNase
homologues are found in bacteria, archaea, and eukaryotes.
They contain no disufide bonds; Region: SNc; cd00175"
/db_xref="CDD:29137"
misc_feature order(263949..263951,263976..263978,263994..263996,
264003..264005,264126..264131,264135..264137)
/locus_tag="Rleg_6820"
/note="Catalytic site; other site"
/db_xref="CDD:29137"
gene complement(264519..265493)
/locus_tag="Rleg_6821"
/db_xref="GeneID:8022404"
CDS complement(264519..265493)
/locus_tag="Rleg_6821"
/inference="protein motif:PFAM:PF00691"
/note="PFAM: OmpA/MotB domain protein;
KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="OmpA/MotB domain protein"
/protein_id="YP_002984821.1"
/db_xref="GI:241666737"
/db_xref="InterPro:IPR006665"
/db_xref="GeneID:8022404"
/translation="MAAHIAETPKLEHKGYNRGLILGLTMAESMLLLVFCLLLVAAAL
VTAERKKRYEAERELQVTEQKLAELKKDNFDATARVVELQARLGAGNLSPIDREKFEK
EWRELISARQAVDRLQKSGVEMSELEKLAALRKVLSDNGIDLDAAPAEIKRLVTANAA
AKSPHEWPPIINLSEAGGYYFRSGSAELTNEFQQKLGTSISDQIADNLSRYQVDVIEV
IGHTDEQPLARTNSNLDKTFIDVLDSKLPITALEPADNAGLGLARAIAVANILKANPK
LGQATVLPMSAAQLILPGDTVTVGQAGNVEARRRIEIRIRRRAQSLSP"
misc_feature complement(<264672..264956)
/locus_tag="Rleg_6821"
/note="Peptidoglycan binding domains similar to the
C-terminal domain of outer-membrane protein OmpA; Region:
OmpA_C-like; cl02931"
/db_xref="CDD:212269"
misc_feature complement(order(264717..264719,264726..264731,
264816..264818,264825..264830,264942..264947))
/locus_tag="Rleg_6821"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:143586"
gene complement(265478..266683)
/locus_tag="Rleg_6822"
/db_xref="GeneID:8022405"
CDS complement(265478..266683)
/locus_tag="Rleg_6822"
/inference="similar to AA sequence:KEGG:Arad_2035"
/note="KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984822.1"
/db_xref="GI:241666738"
/db_xref="GeneID:8022405"
/translation="MASREVTRSAIRDYGPLVLFALTTIGGMVFIWTAKLWGWSTAVV
TVVPLLLMATYFLASLLLAGFRLHNEQAGDNLYYMGFLFTLSSLGVSLYLFAGETSID
TIVRNFGIAVTSTIAGVTLRILFNQMRRDPLDIERSARHELAEMTRRVRTELDSSARE
FSNYRRVSNQMLSEGFDEIARQAEKNGEDIRKAIESLSKEAIKPIQEAAQQLSAIIES
HNKTINDSNNNAAAKLTETTGQLSTIIDKFGGAVESVGTRLGEIRAPEDVIKIELTPV
IESIREMTEAHLKRMEADTERGRSYIEQTKEALQPLQTLEEKLDRIANALEKPPTPLP
PEAGPSPSTYADRPEPAVPTGAGSVSEETAIDLASLEASPAKPVEVDDKPRPASAIER
KRWFNWQRT"
misc_feature complement(<265700..>266305)
/locus_tag="Rleg_6822"
/note="chromosome segregation protein SMC, common
bacterial type; Region: SMC_prok_B; TIGR02168"
/db_xref="CDD:162739"
gene complement(266683..267501)
/locus_tag="Rleg_6823"
/db_xref="GeneID:8022406"
CDS complement(266683..267501)
/locus_tag="Rleg_6823"
/inference="similar to AA sequence:KEGG:Arad_2034"
/note="KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984823.1"
/db_xref="GI:241666739"
/db_xref="GeneID:8022406"
/translation="MARSSRRSRRRGGNSVGLIVGAIALGLVSVAIIGAFGWLKYRAS
STVAVDKASLCPVTGATSETLLDVTDPISDTTALDLKNQFQQIVARVPVGGAIDIYSL
TEKEGEPERTFHGCNPGSGDLADEWTSNPRLIQDRWEKGFQKPLEEIAGRLASGKAGD
ASPIMAGIQRINLEVFSSLPAGTPRALFVASDMIEHTPAFSNYRDGVAYSKFQKSEAR
DKFRTSLDGVSVKILAFQRPNLKFSAEELAEFWKEWITKNNGYFDGFIRLEGKR"
sig_peptide complement(267406..267501)
/locus_tag="Rleg_6823"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.947) with cleavage site probability 0.484 at
residue 32"
gene complement(267479..268927)
/locus_tag="Rleg_6824"
/db_xref="GeneID:8022407"
CDS complement(267479..268927)
/locus_tag="Rleg_6824"
/inference="similar to AA sequence:KEGG:Arad_2033"
/note="KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984824.1"
/db_xref="GI:241666740"
/db_xref="GeneID:8022407"
/translation="MRFEALNRLWEGVRESSHDFRASTDIFPSLDIDKTSSTLDLRAK
GAENGKLNRPAPSAASPDEVEQRIVSRIEEEKAASYQVLEDQFQTFEGRLRNLDFEGQ
FGLIRQANASSVSDFKAEVASGVDELHGLRRDLKAAEDEMSSFKAKHNLDRAAKVSTA
AAQAFKIALIVFLVLFEMIMNGSFLAKGSEQGIVGGVTEAIAFAVLNIGSALLFSVYC
VRFLVHRSLFFKLLGFCGLVAYICIALGINLALAHYREVSSTVLSGAGAEVISRLGNA
PLELAELNSWMLFAVGLLFSILAFIDGCYLTDPYPGFAGVRKRLDSARANYIDRKLEL
IDNLRDIRDDHNAKIEEIVRDLSGRRQECAAIIAHRTRTVGLFAEHQSNLERAANALL
TIYRDANRAGRTEPEPGYFSHPYKLERLAPVLRTSEEWDDAVLSGRIQAAQAELSEQI
RRIGAEFEAAVENYHKLDNIFPEAGLGAIQQA"
gene complement(269707..270408)
/locus_tag="Rleg_6825"
/db_xref="GeneID:8022408"
CDS complement(269707..270408)
/locus_tag="Rleg_6825"
/inference="protein motif:PFAM:PF01965"
/note="PFAM: ThiJ/PfpI domain protein;
KEGG: sus:Acid_1477 ThiJ/PfpI domain-containing protein"
/codon_start=1
/transl_table=11
/product="ThiJ/PfpI domain protein"
/protein_id="YP_002984825.1"
/db_xref="GI:241666741"
/db_xref="InterPro:IPR002818"
/db_xref="GeneID:8022408"
/translation="MKILMVFTSHDTLGSTGRKTGFWLEEGAAPYYVFRDAGVDLTLV
SPKGGQPPIDPKSDLPENQTPAMTRFKADEAAQKVFASTKKLSEARSEDFDAVFYPGG
HGPMWDLVDNPESIKLIESFYNSSKPVAAVCHAPAVLHRVTYRGAPIVKGKRVTGFTN
GEEEEVQLTKVVPFLVEDELKRLGGLYEKKANWESFAITDGMLITGQNPASSTAGAQA
LIKLLTSLKAGAVVA"
misc_feature complement(269740..270402)
/locus_tag="Rleg_6825"
/note="Type 1 glutamine amidotransferase (GATase1)-like
domain found in proteins similar to Escherichia coli Hsp31
protein; Region: GATase1_Hsp31_like; cd03141"
/db_xref="CDD:153235"
misc_feature complement(269734..270351)
/locus_tag="Rleg_6825"
/note="Putative intracellular protease/amidase [General
function prediction only]; Region: ThiJ; COG0693"
/db_xref="CDD:31037"
misc_feature complement(order(269920..269922,270007..270012))
/locus_tag="Rleg_6825"
/note="potential catalytic triad [active]"
/db_xref="CDD:153235"
misc_feature complement(270010..270012)
/locus_tag="Rleg_6825"
/note="conserved cys residue [active]"
/db_xref="CDD:153235"
gene complement(270557..270946)
/locus_tag="Rleg_6826"
/db_xref="GeneID:8022409"
CDS complement(270557..270946)
/locus_tag="Rleg_6826"
/inference="protein motif:PFAM:PF01361"
/note="PFAM: 4-oxalocrotonate tautomerase;
KEGG: mno:Mnod_8518 4-oxalocrotonate tautomerase"
/codon_start=1
/transl_table=11
/product="4-oxalocrotonate tautomerase"
/protein_id="YP_002984826.1"
/db_xref="GI:241666742"
/db_xref="InterPro:IPR004370"
/db_xref="GeneID:8022409"
/translation="MPLVKIHILKGRSPQEVDVLLDTIHDVVVETFGVPRRDRYQILQ
EHEASNIRALDTGLDITRTEKFLLLEITSRPRSRDAKVAFYSSLTRALQARCDVAPSD
VMVSLHINSDEDWSFGMGSAQFLTGEL"
misc_feature complement(270797..270943)
/locus_tag="Rleg_6826"
/note="4-Oxalocrotonate Tautomerase: Catalyzes the
isomerization of unsaturated ketones. The structure is a
homohexamer that is arranged as a trimer of dimers. The
hexamer contains six active sites, each formed by residues
from three monomers, two from one...; Region:
4Oxalocrotonate_Tautomerase; cl00235"
/db_xref="CDD:206922"
gene complement(271258..271494)
/locus_tag="Rleg_6827"
/db_xref="GeneID:8022410"
CDS complement(271258..271494)
/locus_tag="Rleg_6827"
/inference="protein motif:PFAM:PF01361"
/note="PFAM: 4-oxalocrotonate tautomerase;
KEGG: smd:Smed_3914 4-oxalocrotonate tautomerase"
/codon_start=1
/transl_table=11
/product="4-oxalocrotonate tautomerase"
/protein_id="YP_002984827.1"
/db_xref="GI:241666743"
/db_xref="InterPro:IPR004370"
/db_xref="GeneID:8022410"
/translation="MPIVTVQVTREGTTPDRASVTPEEKAAIIAGVSQVMLDVLNKPL
ESTYVVIEEVDLDNWGWGGLPTVQYRKKKAEGKA"
misc_feature complement(271267..271494)
/locus_tag="Rleg_6827"
/note="Uncharacterized protein, 4-oxalocrotonate
tautomerase homolog [General function prediction only];
Region: COG1942"
/db_xref="CDD:32125"
misc_feature complement(order(271357..271359,271486..271491))
/locus_tag="Rleg_6827"
/note="active site 1 [active]"
/db_xref="CDD:29603"
misc_feature complement(order(271375..271380,271390..271392,
271399..271404,271411..271413,271471..271491))
/locus_tag="Rleg_6827"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29603"
misc_feature complement(order(271306..271326,271333..271338,
271342..271356,271360..271365,271396..271398,
271405..271410,271417..271422,271474..271476,
271480..271482))
/locus_tag="Rleg_6827"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:29603"
misc_feature complement(order(271318..271320,271474..271476))
/locus_tag="Rleg_6827"
/note="active site 2 [active]"
/db_xref="CDD:29603"
gene complement(271531..272163)
/locus_tag="Rleg_6828"
/db_xref="GeneID:8022411"
CDS complement(271531..272163)
/locus_tag="Rleg_6828"
/inference="similar to AA sequence:KEGG:Bphyt_1688"
/note="KEGG: bpy:Bphyt_1688 conserved hypothetical
protein, thioredoxin-like fold"
/codon_start=1
/transl_table=11
/product="conserved hypothetical protein, thioredoxin-like
fold protein"
/protein_id="YP_002984828.1"
/db_xref="GI:241666744"
/db_xref="GeneID:8022411"
/translation="MELVLAADPMCSWCYGFGKQMGLLLERRPDLSLKILLGGLRAGA
TDVLDDAGKQFRLHHWGKVEEASGVPFNREGLLARQGFVYDTEPVCRAVVAARILRPE
ADLLSVFRAFQHAFYVDALDTTDGATLAETGSRALAELGHPVSSEEFLAEWDKRSTIQ
EAATDFATVRGMGVSSFPTLFLNKAGTLSKVGAGYAHVDELEKHLAAMAA"
misc_feature complement(271534..272163)
/locus_tag="Rleg_6828"
/note="Predicted protein-disulfide isomerase
[Posttranslational modification, protein turnover,
chaperones]; Region: COG3531"
/db_xref="CDD:33334"
misc_feature complement(271579..272163)
/locus_tag="Rleg_6828"
/note="DsbA family, FrnE-like subfamily; composed of
uncharacterized proteins containing a CXXC motif with
similarity to DsbA and FrnE. FrnE is presumed to be a
thiol oxidoreductase involved in polyketide biosynthesis,
specifically in the production of the...; Region:
DsbA_FrnE_like; cd03025"
/db_xref="CDD:48574"
misc_feature complement(order(272122..272124,272131..272133))
/locus_tag="Rleg_6828"
/note="catalytic residues [active]"
/db_xref="CDD:48574"
gene complement(272234..272947)
/locus_tag="Rleg_6829"
/db_xref="GeneID:8022412"
CDS complement(272234..272947)
/locus_tag="Rleg_6829"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR;
KEGG: sme:SM_b20210 putative oxidoreductase protein"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_002984829.1"
/db_xref="GI:241666745"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="GeneID:8022412"
/translation="MSNQQKVAVITGASQGIGEGLVRAYRARNYHVVATSRSIKQGSD
DGVHAVAGDISNSETAERVIREAIDRFGRIDTLVNNAGVFTAKPFVDFTQEDYDLNFG
VNVSGFFHITQRAAREMLKQGSGHIVSITTSLVNQPVSSVPTALASLTKGGLNAVTKE
LAIEFAKTGVRVNAVSPGIIKTPMHAPETHEFLSALHPVGHMGEISDIVDAVIYLEDA
SFVTGEILHVDGGQNAGRW"
misc_feature complement(272255..272947)
/locus_tag="Rleg_6829"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05557"
/db_xref="CDD:180126"
misc_feature complement(272261..272926)
/locus_tag="Rleg_6829"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(272399..272404,272408..272419,
272495..272497,272519..272521,272555..272560,
272639..272641,272702..272710,272786..272794,
272834..272842,272897..272908,272912..272914))
/locus_tag="Rleg_6829"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(272495..272497,272519..272521,
272636..272638))
/locus_tag="Rleg_6829"
/note="active site"
/db_xref="CDD:212491"
gene complement(273122..273664)
/locus_tag="Rleg_6830"
/db_xref="GeneID:8022413"
CDS complement(273122..273664)
/locus_tag="Rleg_6830"
/inference="protein motif:PFAM:PF00903"
/note="PFAM: glyoxalase/bleomycin resistance
protein/dioxygenase;
KEGG: bja:blr6270 hypothetical protein"
/codon_start=1
/transl_table=11
/product="glyoxalase/bleomycin resistance
protein/dioxygenase"
/protein_id="YP_002984830.1"
/db_xref="GI:241666746"
/db_xref="InterPro:IPR004360"
/db_xref="GeneID:8022413"
/translation="MDSELRPSSKEAPQSLSGVAMTLELAVIAVSDVDRSKLFYAALG
WRFDIDFQGDDYRIVQFTPPGSGCSVMFGQNLITAPSGSSRGLHLVVSDLPAARSDLL
SRGVETSEPFHDVGGIFHHSNGVGITAGLNPERKSYASYFIFHDPDGNEWTVQEITTR
LPGRKGDTAFTKELTKAVWG"
misc_feature complement(273197..273592)
/locus_tag="Rleg_6830"
/note="This domain superfamily is found in a variety of
structurally related metalloproteins, including the type I
extradiol dioxygenases, glyoxalase I and a group of
antibiotic resistance proteins; Region: Glo_EDI_BRP_like;
cl14632"
/db_xref="CDD:211465"
misc_feature complement(order(273206..273208,273212..273214,
273236..273238,273407..273409,273446..273448,
273452..273454,273491..273493,273578..273580,
273590..273592))
/locus_tag="Rleg_6830"
/note="active site"
/db_xref="CDD:211348"
misc_feature complement(order(273206..273208,273407..273409,
273590..273592))
/locus_tag="Rleg_6830"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:211348"
misc_feature complement(273209..273589)
/locus_tag="Rleg_6830"
/note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily; Region: Glyoxalase; pfam00903"
/db_xref="CDD:201499"
gene 274431..276722
/locus_tag="Rleg_6831"
/db_xref="GeneID:8022414"
CDS 274431..276722
/locus_tag="Rleg_6831"
/EC_number="1.7.99.4"
/inference="protein motif:TFAM:TIGR01701"
/note="KEGG: atc:AGR_L_213 hypothetical protein;
TIGRFAM: oxidoreductase alpha (molybdopterin) subunit;
PFAM: molydopterin dinucleotide-binding region;
molybdopterin oxidoreductase"
/codon_start=1
/transl_table=11
/product="oxidoreductase alpha (molybdopterin) subunit"
/protein_id="YP_002984831.1"
/db_xref="GI:241666747"
/db_xref="InterPro:IPR006656"
/db_xref="InterPro:IPR006657"
/db_xref="InterPro:IPR010046"
/db_xref="GeneID:8022414"
/translation="MKNNRPDGIERYDHPAGGWDALKAVVKTLAHQQIVAQGSKTLLK
ANQPEGFDCPGCAWPDPKHTSSFEFCENGAKAITWESTAKRTDAEFFRQHSRSELWTW
TDHELEDAGRLTLPLWYDQGTDHFEQIAWDAAFALIAAELNKLDDPDQAEFYTSGRAS
NEAAFLYQLFVRAYGTNNFPDCSNMCHEATSVGLPKSIGVGKGTVTLEDFDHADAIFS
FGHNPGTNHPRMMTTLHEAARRGVPIIVFNPLKERALERFAAPQDPVEMVTMSSTPIA
SAYHQVRVGGDLAVLKGMMKAVLERDAASLAAGGIGILDRPFIEEHTSGFDILRADID
ATSWQEIVAISGLTRQAIESAADVYANARNVIVCYGMGITQHAKGTYNVQHIANLLML
RGNIGREGAGIAPIRGHSNVQGDRTVGITEIPNKALLDGMERAFGFRPPSDKGHNAIE
AVEAAIDGRAKALICLGGNLAVAMSDSGATFSGMRNLDLAVHIATKLNRSHLLTAKTT
LVLPCLGRTDLDIQASGRQAVTVEDSMSMVHASRGFLHPPGELVRSEPAIIGGIARAT
LGDRYGIDWEGMVADYDHIRDKIEEVFPDFYEFNTRVRKPGGFRLDVAASFRRWNTPE
RKAKFLPSPGLSEDTPAESEGALMLTTIRSHDQYNTTIYGLDDRYRGVFGRRDVVFMN
AEDLAGRGLKDGDRIEVRGLIGEVDDNHLVSGFTAVAYDIPKGSIAGYYPEMNVVISL
RHFDRQSGAPSYKGVPVRVKLAD"
misc_feature 274473..276710
/locus_tag="Rleg_6831"
/note="oxidoreductase alpha (molybdopterin) subunit;
Region: Fdhalpha-like; TIGR01701"
/db_xref="CDD:162496"
misc_feature 274578..276317
/locus_tag="Rleg_6831"
/note="The MopB_ydeP CD includes a group of related
uncharacterized bacterial molybdopterin-binding
oxidoreductase-like domains with a putative molybdopterin
cofactor binding site. These members belong to the
molybdopterin_binding (MopB) superfamily of proteins;
Region: MopB_ydeP; cd02767"
/db_xref="CDD:29463"
misc_feature order(274710..274712,274977..274979,274983..274991,
275085..275090,275094..275096,275103..275108,
275169..275177,275289..275291,275538..275549,
275652..275657,275829..275837,275907..275915,
275922..275924,275967..275972,276027..276029)
/locus_tag="Rleg_6831"
/note="putative molybdopterin cofactor binding site
[chemical binding]; other site"
/db_xref="CDD:29463"
misc_feature 276369..276707
/locus_tag="Rleg_6831"
/note="The MopB_CT_ydeP CD includes a group of related
uncharacterized bacterial molybdopterin-binding
oxidoreductase-like domains with a putative molybdopterin
cofactor binding site. This CD is of the conserved
molybdopterin_binding C-terminal (MopB_CT) region...;
Region: MopB_CT_ydeP; cd02787"
/db_xref="CDD:30319"
misc_feature order(276381..276395,276399..276410,276621..276623,
276633..276635,276684..276689)
/locus_tag="Rleg_6831"
/note="putative molybdopterin cofactor binding site; other
site"
/db_xref="CDD:30319"
gene complement(276764..276988)
/locus_tag="Rleg_6832"
/db_xref="GeneID:8022415"
CDS complement(276764..276988)
/locus_tag="Rleg_6832"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984832.1"
/db_xref="GI:241666748"
/db_xref="GeneID:8022415"
/translation="MMKLHYSMCGAVLSSEHVSMMRGLLKEHCENRQYDRQSAEAEDA
ARGLLWWYQNGVTEQERLRHLLAISVVRGS"
gene complement(277012..277236)
/locus_tag="Rleg_6833"
/db_xref="GeneID:8022416"
CDS complement(277012..277236)
/locus_tag="Rleg_6833"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984833.1"
/db_xref="GI:241666749"
/db_xref="GeneID:8022416"
/translation="MSHRNRKPSGSIFPGVAILFAMAALVGALVSIQRPAAPIRVWVP
AQSGESRLGGEKSLSTCSPVWAGCNPSNPV"
sig_peptide complement(277165..277236)
/locus_tag="Rleg_6833"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.997) with cleavage site probability 0.626 at
residue 24"
gene complement(277427..280192)
/locus_tag="Rleg_6834"
/db_xref="GeneID:8022417"
CDS complement(277427..280192)
/locus_tag="Rleg_6834"
/inference="protein motif:PFAM:PF00486"
/note="PFAM: transcriptional regulator domain protein;
SMART: AAA ATPase;
KEGG: ret:RHE_PF00532 LuxR family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_002984834.1"
/db_xref="GI:241666750"
/db_xref="InterPro:IPR001867"
/db_xref="InterPro:IPR003593"
/db_xref="GeneID:8022417"
/translation="MGAPVPLGSRAFEILETLAVSSGRIVTKDELMKRVWPGMVVEDN
TLQVHISAIRRALGKDRDLLRTVSGRGYRLLGEWTEPEKRFADPTSATLVRSSEREDF
VTNIPSAASELIGRQAAISHIVTLMSAYRIVTLTGPGGIGKTVLASEVARRLQPTIDG
DAFFVELVSLSDPNLVPTTLAQALDLRLQGDDVSAELVARAIGNRKMLLLIDNCEHVV
DAAAEMVEAMLRACPNVSVLATSRELLRIEGEFTYRVPPLDVPANEKVGDPLTHSAVQ
LFVARTRALQSDFTTSRDRVSIIAGICRHLDGIPLAIEFAAARAATLGLQQIAGRLDD
RFVLLTGGRRTALPRHRTLRAALDWSYELLPEGERRLLHSLSVYPAGFTLEAAMAASG
EDEEETALGLSNLVTKSLVTFDGTEAAPRWRLLETVRVYSLEKLGGGTDYRMTMRRTT
AFFHSLFQPFSSEDSLQLAIDGLGPYRREIDNLRAALTWALSPEGDGKLGAGLAAIAS
DFWTATSLVSESGEWAKKALSCLEGEEGGRTELVLQCALGFAMIYTQGMSEQGRAVLA
RALTLAETLDDQDYRQRVTCALWLFSARSVELDDALVYAQEYGKGAGGGDARSRATAA
WLSGIPQTYQAHHVEAHDRLDWAARNSPPNNRRTDMLRLGADIRTSSMAHDTVNLISL
GRLEVASQASEDSVDEARATKQPFVLCVALAWASAFVSLSLDNEARARHWGEELTAHA
LQHGLKPFYAVGICVRGSLASRSGSPAEGIDALQAGIRDMQESSYLLFYPFFMCELAA
ALQAAGRLDEALLEIDRAQKFSVEKSYRWIMPELLRKKGEIIAAQGANESLAVDLFRE
AGLRASAQGGLYWELTAGMSYAEYLASRGDLRAAQEILRPVYERFREGLSTPRLLQAK
RLLGAKQ"
misc_feature complement(279959..>280189)
/locus_tag="Rleg_6834"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature complement(279971..280189)
/locus_tag="Rleg_6834"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature complement(order(279980..279982,279995..279997,
280022..280027,280049..280051,280058..280060,
280109..280114,280169..280171))
/locus_tag="Rleg_6834"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
misc_feature complement(278600..279817)
/locus_tag="Rleg_6834"
/note="Predicted ATPase [General function prediction
only]; Region: COG3903"
/db_xref="CDD:33690"
gene 280518..281186
/locus_tag="Rleg_6835"
/db_xref="GeneID:8022418"
CDS 280518..281186
/locus_tag="Rleg_6835"
/inference="protein motif:PFAM:PF00196"
/note="PFAM: regulatory protein LuxR; Sigma-70 region 4
type 2;
SMART: regulatory protein LuxR;
KEGG: ret:RHE_PF00533 two-component response regulator
protein"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_002984835.1"
/db_xref="GI:241666751"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR013249"
/db_xref="GeneID:8022418"
/translation="MFPTKKPTDLSTMATTLYSDALVAVLDNGTEFDPNLHLHISGMG
RRLQRFTSAHDLLSGAQSGRFNCILVDASMADLPVADLARLICSYAVHCPIIVVTPSG
SPATSVATTRFRVTFLPKQDDPAVIAEEVNASIRAFNEANRLEAYFLTLTPRERQVMK
FVVEGLLNKQVAFKLNISEITVKAHRGRLMRKMNARTLPDLLYMAARLGPASGSVANE
LSAF"
misc_feature 280575..281147
/locus_tag="Rleg_6835"
/note="Response regulator [Signal transduction
mechanisms]; Region: TtrR; COG4566"
/db_xref="CDD:34204"
misc_feature 280623..280916
/locus_tag="Rleg_6835"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(280728..280730,280752..280754,280812..280814,
280866..280868,280875..280880)
/locus_tag="Rleg_6835"
/note="active site"
/db_xref="CDD:29071"
misc_feature 280728..280730
/locus_tag="Rleg_6835"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(280737..280742,280746..280754)
/locus_tag="Rleg_6835"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 280875..280883
/locus_tag="Rleg_6835"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 280968..281138
/locus_tag="Rleg_6835"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(280971..280979,281016..281024,281046..281051,
281055..281060,281064..281078,281109..281111)
/locus_tag="Rleg_6835"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(281004..281006,281010..281012,281016..281018,
281109..281117,281124..281126,281133..281138)
/locus_tag="Rleg_6835"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene 281335..282372
/locus_tag="Rleg_6836"
/db_xref="GeneID:8022419"
CDS 281335..282372
/locus_tag="Rleg_6836"
/inference="protein motif:PFAM:PF00561"
/note="PFAM: alpha/beta hydrolase fold;
KEGG: ret:RHE_PF00536 epoxide hydrolase protein"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold protein"
/protein_id="YP_002984836.1"
/db_xref="GI:241666752"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="GeneID:8022419"
/translation="MSNSNNATWTRRSFGGVALGLTAAGILAGRVEGAEQIKGPVRHK
GMGLVADKRIDAGDLNVGYAELGPEDGSPVMLFHGWPYDINAFAEVAPLLAERGHRVI
VPHLRGYGSTRFLSDDTMRNGQQSALAVDALKLMDALKIEKATVAGFDWGARTADIVA
ALWPERCRGLVSVSGYLIGNQAAGKAPLPPAAEVQWWYQFYFATDRGRDGYEKYTNDF
AKLIWRLASPQWKFDDTTFDRSAEAFTNPDHVSIVVHNYRWRLGLTEGEKRFDEFETR
LAAGPEIHVPTITMEGDANGAPHPDPNAYAAKFKAKYEHRLAAGGIGHNLPQEAPEAF
AKAVRDVDSWA"
sig_peptide 281335..281436
/locus_tag="Rleg_6836"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.995) with cleavage site probability 0.944 at
residue 34"
misc_feature 281482..282354
/locus_tag="Rleg_6836"
/note="Predicted hydrolases or acyltransferases
(alpha/beta hydrolase superfamily) [General function
prediction only]; Region: MhpC; COG0596"
/db_xref="CDD:30941"
gene 282537..283574
/locus_tag="Rleg_6837"
/db_xref="GeneID:8022420"
CDS 282537..283574
/locus_tag="Rleg_6837"
/inference="protein motif:PFAM:PF00296"
/note="PFAM: Luciferase-like monooxygenase;
KEGG: rec:RHECIAT_CH0000674 probable luciferase protein;
SNP /replace=A"
/codon_start=1
/transl_table=11
/product="Luciferase-like monooxygenase"
/protein_id="YP_002984837.1"
/db_xref="GI:241666753"
/db_xref="InterPro:IPR016048"
/db_xref="GeneID:8022420"
/translation="MEIGIDSFAMLLPDSDTGRLQSAVDRMESVLSEVELADQVGLDV
FGMGEHHRENALDSAPAVILAAAAARTKSIRLTSAVAVLSASDPVRLFQEFATLDLIS
RGRAEIVVGRGSSVEAYPLFGFDLRDYDALFAEKLDLLLKIREQPNIKWQGRFRPAMN
GEGVFPRPHQPKLPIWLGAGGTPESFVRAGTLGLPLMVAIIGGSFERFLPLVELYRRA
WLVAGHPAENQRIGVHALGFVGETDVAAKKAFFPGWFQMFTDAGRERGWPPPTQAQFE
HMCGPGGAFLVGSPQTVAAKISHVNRTLGGIARITFQMSTAALDAEAMRRSIELLGTD
VAPLMRGQLRD"
misc_feature 282537..283556
/locus_tag="Rleg_6837"
/note="putative luciferase-like monooxygenase,
FMN-dependent, CE1758 family; Region: LLM_CE1758_fam;
TIGR04036"
/db_xref="CDD:188551"
misc_feature 282540..283556
/locus_tag="Rleg_6837"
/note="probable oxidoreductase, LLM family; Region:
LLM_2I7G; TIGR03858"
/db_xref="CDD:188392"
gene complement(283623..284084)
/locus_tag="Rleg_6838"
/db_xref="GeneID:8022421"
CDS complement(283623..284084)
/locus_tag="Rleg_6838"
/inference="similar to AA sequence:KEGG:RHE_PF00537"
/note="KEGG: ret:RHE_PF00537 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984838.1"
/db_xref="GI:241666754"
/db_xref="GeneID:8022421"
/translation="MDRHLTEVNGGETAQDDGTALDALIQFYRAFNAGDLKGLEQVWL
GGSDPSMDNPIGGIRRGWDQIADGYSKLFKGKTKVQVTFHDFTSQGGDEWHLFVGRER
GVCQTATETLDVAFRTTRWFVRKDGGWRQLHHHGSVEDPQMLAAYRKLIFG"
misc_feature complement(283671..284027)
/locus_tag="Rleg_6838"
/note="Nuclear transport factor 2 (NTF2-like) superfamily.
This family includes members of the NTF2 family,
Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
and the beta subunit of Ring hydroxylating dioxygenases.
This family is a classic example of...; Region: NTF2_like;
cl09109"
/db_xref="CDD:211454"
gene complement(284287..285513)
/locus_tag="Rleg_6839"
/db_xref="GeneID:8022422"
CDS complement(284287..285513)
/locus_tag="Rleg_6839"
/inference="protein motif:PFAM:PF06779"
/note="PFAM: protein of unknown function DUF1228; major
facilitator superfamily MFS_1;
KEGG: smd:Smed_5539 protein of unknown function DUF1228"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984839.1"
/db_xref="GI:241666755"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR010645"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8022422"
/translation="MSKHSPSPYVVVLAGSASLAIAMGVGRFAFTPILPMMLHDGVVD
LSRAGGLATANYVGYLVGALAAMAVPKRWDHTFVIRLTLVATVLLTALMSVPYAEAWV
ALRFLAGVASAIGFVFTSGWCLAQLSGTGSSIGSAIFTGPGAGIAVSGLAASGMTILG
LSGHTAWLIFAAISATISGIIWKTFGESAKPSDAYSVGAPTRASGKVPKSEMPLFAIA
YGLAGFGYIVTATYLPVIAKNSIPGSPLLTVFWPLFGVAAVVGSLLAARVPHSADVRL
HLIAAYLVQAVGVGLSVIWQDAFGLALSSVLVGLPFTAISFFAMNEVRRIRSSHHARY
MGLLTAVFAIGQIMGPPAVGVIMRHVVNVDAGFDLALAVASIALVVGAAIYVAMILLF
PSERNARTAGRSVRPT"
sig_peptide complement(285424..285513)
/locus_tag="Rleg_6839"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.986) with cleavage site probability 0.814 at
residue 30"
misc_feature complement(<285274..285456)
/locus_tag="Rleg_6839"
/note="Protein of unknown function (DUF1228); Region:
DUF1228; pfam06779"
/db_xref="CDD:115437"
gene complement(285660..286745)
/locus_tag="Rleg_6840"
/db_xref="GeneID:8022423"
CDS complement(285660..286745)
/locus_tag="Rleg_6840"
/inference="protein motif:PFAM:PF03060"
/note="PFAM: 2-nitropropane dioxygenase NPD;
KEGG: ret:RHE_PF00539 dioxygenase protein"
/codon_start=1
/transl_table=11
/product="2-nitropropane dioxygenase NPD"
/protein_id="YP_002984840.1"
/db_xref="GI:241666756"
/db_xref="InterPro:IPR004136"
/db_xref="GeneID:8022423"
/translation="MTRWRDRRILDLFGIELPIIQAPMAGATTVEMVVAAAKAGGLGS
LPSAQLNVEGLRQALHEIRGATHAPVNVNFFSHVSPAEDVAAQMRWRALLAPYFVDAG
LDPAAPIAAAGRAPFDSSFCEVVEELKPEVVSFHFGLPEKSLVQRVKATGAKIISSAT
TVAEAVWLEKNGVDAVIAMGFEAGGHRGNFLSQDMTTQVGIMALLPQVVDAVRVPVIA
AGGIADGRGVAAALMLGASAVQVGTAYLFCPEARIPAVQAEALASARDDSTAITNVFT
GRPARGIVNRLMRDLGPISDAVPAFPTAGGALVPIRAKAEAESRNDFTNLWSGQASRL
ALKVGAEELTRELYQSALDVIARRSPT"
misc_feature complement(285699..286724)
/locus_tag="Rleg_6840"
/note="Nitronate monooxygenase; Region: NMO; pfam03060"
/db_xref="CDD:202520"
misc_feature complement(285897..286703)
/locus_tag="Rleg_6840"
/note="2-Nitropropane dioxygenase (NPD), one of the
nitroalkane oxidizing enzyme families, catalyzes oxidative
denitrification of nitroalkanes to their corresponding
carbonyl compounds and nitrites. NDP is a member of the
NAD(P)H-dependent flavin oxidoreductase...; Region:
NPD_like; cd04730"
/db_xref="CDD:73392"
misc_feature complement(order(286017..286028,286083..286091,
286194..286199,286209..286211,286272..286274,
286338..286340,286521..286523,286674..286679))
/locus_tag="Rleg_6840"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73392"
misc_feature complement(286188..286193)
/locus_tag="Rleg_6840"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73392"
misc_feature complement(286188..286190)
/locus_tag="Rleg_6840"
/note="putative catalytic residue [active]"
/db_xref="CDD:73392"
gene 287034..287759
/locus_tag="Rleg_6841"
/db_xref="GeneID:8022424"
CDS 287034..287759
/locus_tag="Rleg_6841"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR;
KEGG: smd:Smed_5537 short-chain dehydrogenase/reductase
SDR"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_002984841.1"
/db_xref="GI:241666757"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="GeneID:8022424"
/translation="MSVHKTVIITGASQGIGAGLVKTFLDKGWNVVGTSRNISESTLF
DRAGRLELISGDVADPKTAERAAAAAIEQFGSIDALVNNAGVFFTKPFLEYTIDDFRR
LCATNVEGFLHFTQRAIGQMLRQKSGGSVVTITSSLTDHPIAGVTASLPMVTKGGLNA
VTKSLALEFAKDNIRVNALSPGVVDTPLHAKNPRSFLESLSPMGTITAVQEIVDGVVY
LTESSNITGEVLHVDNGAHLGKW"
misc_feature 287046..287747
/locus_tag="Rleg_6841"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature 287052..287732
/locus_tag="Rleg_6841"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(287064..287066,287070..287081,287136..287144,
287196..287204,287280..287288,287349..287351,
287433..287441,287496..287498,287574..287585,
287589..287594)
/locus_tag="Rleg_6841"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(287352..287354,287439..287441,287496..287498)
/locus_tag="Rleg_6841"
/note="active site"
/db_xref="CDD:212491"
gene 287753..288259
/locus_tag="Rleg_6842"
/db_xref="GeneID:8022425"
CDS 287753..288259
/locus_tag="Rleg_6842"
/inference="protein motif:PFAM:PF01042"
/note="PFAM: Endoribonuclease L-PSP;
KEGG: smd:Smed_5536 endoribonuclease L-PSP"
/codon_start=1
/transl_table=11
/product="Endoribonuclease L-PSP"
/protein_id="YP_002984842.1"
/db_xref="GI:241666758"
/db_xref="InterPro:IPR006175"
/db_xref="GeneID:8022425"
/translation="MVVASAEARIKELAICLPKAPTPFGAYVEAFQSGSLLFLSGMLP
VAGHLPLYTGLVGRELSVAEGYDAARAACLSGLAAAQSQLGTLDRIRSVSKLGVYIAC
PADFHEHPKVADGASELLLDVFGPARLPPRVVLGVSSIPLGMPVEVELVFEIGPAFVS
QTQERSQP"
misc_feature 287786..288211
/locus_tag="Rleg_6842"
/note="This group of proteins belong to a large family of
YjgF/YER057c/UK114-like proteins present in bacteria,
archaea, and eukaryotes with no definitive function. The
conserved domain is similar in structure to chorismate
mutase but there is no sequence...; Region:
YjgF_YER057c_UK114_like_1; cd02199"
/db_xref="CDD:100006"
misc_feature order(287831..287836,287843..287845,287849..287851,
287858..287860,287864..287866,287870..287875,
288026..288028,288032..288037,288041..288043,
288047..288049,288092..288094,288101..288103,
288113..288115,288137..288163,288191..288193,
288197..288199,288203..288205)
/locus_tag="Rleg_6842"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100006"
misc_feature order(287831..287833,288080..288082,288092..288094,
288146..288148,288191..288193)
/locus_tag="Rleg_6842"
/note="putative active site [active]"
/db_xref="CDD:100006"
gene 288256..289245
/locus_tag="Rleg_6843"
/db_xref="GeneID:8022426"
CDS 288256..289245
/locus_tag="Rleg_6843"
/inference="protein motif:PFAM:PF00378"
/note="PFAM: Enoyl-CoA hydratase/isomerase;
KEGG: ret:RHE_PF00542 enoyl-CoA hydratase protein"
/codon_start=1
/transl_table=11
/product="Enoyl-CoA hydratase/isomerase"
/protein_id="YP_002984843.1"
/db_xref="GI:241666759"
/db_xref="InterPro:IPR001753"
/db_xref="GeneID:8022426"
/translation="MKVRQPTRTSAIAMSSKALTAAALLLLPALALSGQTKVAEKVDR
AAEVKADPGREHAQIKVDKRTPAYWRVTFDNPPFNIFGPETIPQMEKVVAEIESDPNL
RVVVFDSAVPGFFLTHYNFTPPLAESTSLPSGPTGLHPLPDMLVRISKSPVVSIALIR
GRATGVGSELALASDMRFASRQKAILSQWEVGAALVPGGGPMARLPRLMGRGRALEVL
LGSDDINGDLAEKYGYVNRAFDDDKLDPFVDALANRISGFDRQAIADTKRLVDFASLP
SDPEIAAGWDAFITSVQRPAAQKNIGRLMDMGLQKDPDIEARLGHYTQTLADE"
sig_peptide 288256..288357
/locus_tag="Rleg_6843"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.550 at
residue 34"
misc_feature 288427..289161
/locus_tag="Rleg_6843"
/note="enoyl-CoA hydratase; Provisional; Region: PRK07468"
/db_xref="CDD:180987"
misc_feature 288430..289020
/locus_tag="Rleg_6843"
/note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate synthase,
methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
dehydratase, and dienoyl-CoA isomerase; Region:
crotonase-like; cd06558"
/db_xref="CDD:119339"
misc_feature order(288487..288489,288493..288495,288592..288594,
288604..288618,288739..288741,288745..288753,
288820..288825,288832..288834)
/locus_tag="Rleg_6843"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119339"
misc_feature order(288610..288612,288751..288753)
/locus_tag="Rleg_6843"
/note="oxyanion hole (OAH) forming residues; other site"
/db_xref="CDD:119339"
misc_feature order(288691..288693,288715..288717,288778..288789,
288826..288837,288853..288855,288859..288867,
288871..288876,288889..288894,288898..288903,
288907..288912,288919..288921,288952..288954,
288961..288963,289006..289008,289015..289020)
/locus_tag="Rleg_6843"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
gene 289331..289879
/locus_tag="Rleg_6844"
/db_xref="GeneID:8022427"
CDS 289331..289879
/locus_tag="Rleg_6844"
/inference="similar to AA sequence:KEGG:RHE_PF00543"
/note="KEGG: ret:RHE_PF00543 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984844.1"
/db_xref="GI:241666760"
/db_xref="GeneID:8022427"
/translation="MHSLENQIVDSSFSAIINAPIETIDIPTWCFNLPEEEYQGCSPA
HIAAGFTTADDGTRMSINVETIGGSLMVQHYHETLGEKDHLILDSDSDVFTPNGRVTI
HVTWELSVKKLDANRCEFTNRVQSYATDEMMAFLDRQGIPFELFRTQRQPMSIAHNKG
ETPLFAASIERAALKNSATKAA"
gene 289896..290531
/locus_tag="Rleg_6845"
/db_xref="GeneID:8022428"
CDS 289896..290531
/locus_tag="Rleg_6845"
/inference="protein motif:PFAM:PF00857"
/note="PFAM: isochorismatase hydrolase;
KEGG: ret:RHE_PF00544 isochorismatase protein"
/codon_start=1
/transl_table=11
/product="isochorismatase hydrolase"
/protein_id="YP_002984845.1"
/db_xref="GI:241666761"
/db_xref="InterPro:IPR000868"
/db_xref="GeneID:8022428"
/translation="MTELSFDRNNTGLLVVDPYNDFISEGGKIWPRIKEVAEANNCVP
HMLEVLTAAREAKLRVFFAMHHRYRAGDYENWKYVAPIQRAAWHRKSFEFGTWGGEFR
AEFVPVAGEVVASEHWCSSGFANTDLDLELKRHGIQRVIVIGLVAHTCIEATVRYAAE
LGYDVTVVKDAVADYSPEMMHAALEVNLPSYASAIIDTKETVAAIALTQEA"
misc_feature 289926..290495
/locus_tag="Rleg_6845"
/note="Isochorismatase family; Region: Isochorismatase;
pfam00857"
/db_xref="CDD:201475"
misc_feature 289932..290450
/locus_tag="Rleg_6845"
/note="Cysteine hydrolases; This family contains
amidohydrolases, like CSHase (N-carbamoylsarcosine
amidohydrolase), involved in creatine metabolism and
nicotinamidase, converting nicotinamide to nicotinic acid
and ammonia in the pyridine nucleotide cycle. It...;
Region: cysteine_hydrolases; cd00431"
/db_xref="CDD:29548"
misc_feature order(289944..289946,290244..290246,290343..290345)
/locus_tag="Rleg_6845"
/note="catalytic triad [active]"
/db_xref="CDD:29548"
misc_feature 290328..290333
/locus_tag="Rleg_6845"
/note="conserved cis-peptide bond; other site"
/db_xref="CDD:29548"
gene 290740..292287
/locus_tag="Rleg_6846"
/db_xref="GeneID:8022429"
CDS 290740..292287
/locus_tag="Rleg_6846"
/inference="protein motif:PFAM:PF00171"
/note="PFAM: Aldehyde Dehydrogenase;
KEGG: smd:Smed_5547 aldehyde dehydrogenase"
/codon_start=1
/transl_table=11
/product="Aldehyde Dehydrogenase"
/protein_id="YP_002984846.1"
/db_xref="GI:241666762"
/db_xref="InterPro:IPR000600"
/db_xref="InterPro:IPR015590"
/db_xref="GeneID:8022429"
/translation="MTLSGDLLIGGASMRGAAATFSAINPASGSSMEPSFAGATREQV
EQAASLAWDAFPVYKETSLEDRARFLEAIAEGILAIGDELVLRAIDETGLPRGRIEGE
RARTVGQLRLFAKEVRDGVFQELRFDPADADRKPVAKPDLRLRNIALGPVVVFGASNF
PLAFSVAGGDTASALAAGCPVIVKAHSAHPGTSALVGKAVVDAVAACGLPSGTFALLF
DAGFEVGQTLVADHRVRAVGFTGSRRGGTALMKIASERKQPIPVYAEMSSINPVILYP
NALLGRGAEIGRSFAASLTLGAGQFCTNPGLIIAIEGAGLDAFIESAAAALAEAPAQT
MLTGGICEAYRKGVARLSSSPPVSQVSAGKNGTAHQASAALFETTAADFLANPELQEE
VFGAAGLIVRCHDDDDLRKVVESLEGQLTIALHVDAKDVDAASQMIPQLELLAGRLLV
NGFGTGVEVSPAMVHGGPYPATSDGRSTSVGTLAIYRFLRPVSYQDFPVGLLPAPLKD
VKAAPRA"
misc_feature 290755..292224
/locus_tag="Rleg_6846"
/note="NAD-dependent aldehyde dehydrogenases [Energy
production and conversion]; Region: PutA; COG1012"
/db_xref="CDD:31216"
misc_feature 290869..292227
/locus_tag="Rleg_6846"
/note="Alpha-Ketoglutaric Semialdehyde Dehydrogenase;
Region: ALDH_KGSADH; cd07129"
/db_xref="CDD:143447"
misc_feature order(290905..290907,290917..290919,291121..291123,
291163..291165,291169..291171,291478..291480,
291487..291489,291979..291981,292042..292044,
292054..292056,292066..292068,292072..292083,
292087..292089,292111..292113,292126..292131,
292141..292146,292204..292209,292213..292224)
/locus_tag="Rleg_6846"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143447"
misc_feature order(291211..291213,291289..291291,291295..291300,
291415..291417,291454..291456,291463..291465,
291472..291474)
/locus_tag="Rleg_6846"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:143447"
misc_feature order(291214..291216,291532..291534,291634..291636,
291643..291645)
/locus_tag="Rleg_6846"
/note="catalytic residues [active]"
/db_xref="CDD:143447"
gene complement(292342..292935)
/locus_tag="Rleg_6847"
/db_xref="GeneID:8022430"
CDS complement(292342..292935)
/locus_tag="Rleg_6847"
/inference="protein motif:PFAM:PF03358"
/note="PFAM: NADPH-dependent FMN reductase;
KEGG: smd:Smed_5533 NADPH-dependent FMN reductase"
/codon_start=1
/transl_table=11
/product="NADPH-dependent FMN reductase"
/protein_id="YP_002984847.1"
/db_xref="GI:241666763"
/db_xref="InterPro:IPR005025"
/db_xref="GeneID:8022430"
/translation="MPTKPKIAIIIGSTRPTRFADKPAQWILKQAQARDDIDVEILDL
RDHPLPFFDEVASNAYAPSQSAEAVRWQHTVARYDGYIFVVAEYNRSITGVLKNALDQ
SYVEWARKPFTAIAYGTAGGSRALEHLRGIGVELQMVSTHAAVHIGGSDFFTVFSMGG
NKPIEEIEANLLPSAKTALDELVWWAKATMAAKASEV"
misc_feature complement(292519..292923)
/locus_tag="Rleg_6847"
/note="NADPH-dependent FMN reductase; Region: FMN_red;
pfam03358"
/db_xref="CDD:202604"
gene complement(292987..294015)
/locus_tag="Rleg_6848"
/db_xref="GeneID:8022431"
CDS complement(292987..294015)
/locus_tag="Rleg_6848"
/inference="protein motif:PFAM:PF00291"
/note="catalyzes the formation of pyruvate from
D-cysteine"
/codon_start=1
/transl_table=11
/product="D-cysteine desulfhydrase"
/protein_id="YP_002984848.1"
/db_xref="GI:241666764"
/db_xref="InterPro:IPR001926"
/db_xref="GeneID:8022431"
/translation="MSDWDLLNRFPRVRLVNGPTPIQRLDRLEQVLGESRRGVSIWAK
RDDLMELGGGGNKLRKLEFLIGQARSKGCDTLVVTGGVQSNFARLAAAACARTGLACE
VVLTQTVPRGTEIYQANGNVLLDRVFGARVHLLGTGDDATAFATARASEIAAAGGKAF
VGTLGGSTPVGALGYVDCAFEIAAQSTEIGIAFDHVVIPNGSGGMHAGLAVGDALVGK
NPSRIRAYTVLSPAETCVAATVEKVNAVFDLLGKKDRIRAEELAIDGAKLGGGYGVPT
CEMIEAIRLVGRSEGLLLDPVYGGKAFAGLLSDIENEVIAPGSNVLFVMTGGSPGLYA
YADALSSD"
misc_feature complement(292993..293997)
/locus_tag="Rleg_6848"
/note="D-cysteine desulfhydrase; Validated; Region:
PRK03910"
/db_xref="CDD:179673"
misc_feature complement(293032..293958)
/locus_tag="Rleg_6848"
/note="Tryptophan synthase beta superfamily (fold type
II); this family of pyridoxal phosphate (PLP)-dependent
enzymes catalyzes beta-replacement and beta-elimination
reactions. This CD corresponds to
aminocyclopropane-1-carboxylate deaminase (ACCD),
tryptophan...; Region: Trp-synth-beta_II; cl00342"
/db_xref="CDD:213095"
misc_feature complement(order(293035..293040,293125..293127,
293401..293415,293761..293763,293845..293850))
/locus_tag="Rleg_6848"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:107202"
misc_feature complement(293845..293847)
/locus_tag="Rleg_6848"
/note="catalytic residue [active]"
/db_xref="CDD:107202"
gene complement(294051..294860)
/locus_tag="Rleg_6849"
/db_xref="GeneID:8022432"
CDS complement(294051..294860)
/locus_tag="Rleg_6849"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR
domain protein; NAD-dependent epimerase/dehydratase;
KEGG: smd:Smed_5531 short-chain dehydrogenase/reductase
SDR"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_002984849.1"
/db_xref="GI:241666765"
/db_xref="InterPro:IPR001509"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR002424"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8022432"
/translation="MTNFPRGTALITGGSSGIGALYADRLARRGYDLILVARSQDALA
RISKDIASSTGRNVKTVRADLGQRDDLLKVEGILRSDPSITMLVNNAGVGAVEPLLMS
DVEAMEKMIAINVTALTRLVYAVAPSFVAREHGTIVNMASALGVAPEILNGVYGATKA
FVIALTFSLQKELAEKNIRIQAVLPGAVETPFWEASGGSLDRLPDQIVMKAEDAVDAA
LAGLDMGELMTLPSVPNIDDWNAYEAARQKLMPNLSRNVPAPRYRTPALAS"
misc_feature complement(294072..294860)
/locus_tag="Rleg_6849"
/note="Short-chain dehydrogenases of various substrate
specificities [General function prediction only]; Region:
DltE; COG0300"
/db_xref="CDD:30648"
sig_peptide complement(294789..294860)
/locus_tag="Rleg_6849"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.822) with cleavage site probability 0.818 at
residue 24"
misc_feature complement(294195..294836)
/locus_tag="Rleg_6849"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(294288..294293,294297..294308,
294384..294386,294396..294398,294435..294443,
294522..294524,294585..294593,294666..294674,
294744..294752,294807..294818,294822..294824))
/locus_tag="Rleg_6849"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(294384..294386,294396..294398,
294435..294437,294519..294521))
/locus_tag="Rleg_6849"
/note="active site"
/db_xref="CDD:212491"
gene complement(294899..296185)
/locus_tag="Rleg_6850"
/db_xref="GeneID:8022433"
CDS complement(294899..296185)
/locus_tag="Rleg_6850"
/EC_number="3.3.2.9"
/inference="protein motif:PRIAM:3.3.2.9"
/note="PFAM: Epoxide hydrolase domain protein; alpha/beta
hydrolase fold;
KEGG: smd:Smed_5530 epoxide hydrolase domain protein"
/codon_start=1
/transl_table=11
/product="Microsomal epoxide hydrolase"
/protein_id="YP_002984850.1"
/db_xref="GI:241666766"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="InterPro:IPR006311"
/db_xref="InterPro:IPR010497"
/db_xref="GeneID:8022433"
/translation="MSARVETRTALSTTRRQLLAITAATAALSILPKPVRAATEGDAI
RPFKCAIPQEEVDELRRRVRATRWPGKETVSDRSQGAQLQKLKPLVEYWGKEYDWRRG
EKKLNAHTQFMTRIDGLDIHFIHVKSKHADALPLIMTHGWPGSVLELVKTIGPLTDPT
AHGGAAEDAFHVVIPSMPGYGFSEVPSETGWGPDRIGRAWHVLMKRLGYDRYVSQGGD
WGAVVSDKMAAQAPDGLLGIHTNMPATVPPDIAKALADGEPAPAGLSEDEKAAYEQMN
ALYTKGAGYALMMVTRPQTLGYALTDSPVGLAAWYYDKFADWTYSGGDPEKSLSKDEM
LDDISLYWFTGTATSGARLYWENNANNFNAVDIKIPAAITVFPGEIYQAPKSWAEKAY
HNLIYYSKVDKGGHFAAWEQPELFASELRAAFRTLR"
sig_peptide complement(296072..296185)
/locus_tag="Rleg_6850"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.990) with cleavage site probability 0.987 at
residue 38"
misc_feature complement(295727..296050)
/locus_tag="Rleg_6850"
/note="Epoxide hydrolase N terminus; Region: EHN;
pfam06441"
/db_xref="CDD:203452"
misc_feature complement(294905..295849)
/locus_tag="Rleg_6850"
/note="Predicted hydrolases or acyltransferases
(alpha/beta hydrolase superfamily) [General function
prediction only]; Region: MhpC; COG0596"
/db_xref="CDD:30941"
gene 296400..297068
/locus_tag="Rleg_6851"
/db_xref="GeneID:8022434"
CDS 296400..297068
/locus_tag="Rleg_6851"
/inference="protein motif:PFAM:PF00903"
/note="PFAM: glyoxalase/bleomycin resistance
protein/dioxygenase;
KEGG: ret:RHE_PF00545 hypothetical protein;
SNP /replace=G"
/codon_start=1
/transl_table=11
/product="glyoxalase/bleomycin resistance
protein/dioxygenase"
/protein_id="YP_002984851.1"
/db_xref="GI:241666767"
/db_xref="InterPro:IPR004360"
/db_xref="GeneID:8022434"
/translation="MAIQEPTPTKSARADHIDMKLEVVVIPVSDVDRAKSFYTGLGWR
LDADVSGKDGFRVVQVTPPGSPCSVIFGSNVAAASPGSAQGLHLVVTDIEMAHAALAS
HGAEMSGVFHDAGGVFHHKGADQRLPGPHPSRSSYGSFASFSDPDGNGWLLQEVTARL
PGRIDTKGAAFTSAGDLAEALRRAAAAHGEHEKRDGGKHDEAWPEWYADYLIKEQSGQ
TLPT"
misc_feature 296466..296864
/locus_tag="Rleg_6851"
/note="This conserved domain belongs to a superfamily
including the bleomycin resistance protein, glyoxalase I,
and type I ring-cleaving dioxygenases; Region:
Glo_EDI_BRP_like_16; cd07263"
/db_xref="CDD:211353"
misc_feature 296469..296852
/locus_tag="Rleg_6851"
/note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily; Region: Glyoxalase; pfam00903"
/db_xref="CDD:201499"
gene complement(297305..298237)
/locus_tag="Rleg_6852"
/db_xref="GeneID:8022435"
CDS complement(297305..298237)
/locus_tag="Rleg_6852"
/inference="protein motif:PFAM:PF03466"
/note="PFAM: LysR substrate-binding; regulatory protein
LysR;
KEGG: smd:Smed_5526 LysR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_002984852.1"
/db_xref="GI:241666768"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:8022435"
/translation="MDRIDAMKVFVTAVEEGSLAGAARRLKRSPTAISRALGLLEQHV
GVELLHRTTRSLKLSEAGQRYVEACRRVLVDLEEADMIAGSERSSPRGTLTISAPPIL
GEEVLRPILDSFLLENANVSVRLLMLDRFVNLVDEGVDVALRIGNLADSTHMSTRIGG
DVRRVVVAAPQYLDSRAAITEPSDLSRHDLIAFSNFGLESWSFAPAKGTSVPRTVHFT
PRYLVNSVRAAAASAAEGMGVTRLYSYHVAEYVRDGRLRVVLHQAEPPALPVHILTPQ
GRAAVPKVRTFIDFAVPRLRSELGRIAAESGSLE"
misc_feature complement(297335..298231)
/locus_tag="Rleg_6852"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(298049..298228)
/locus_tag="Rleg_6852"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(297353..297964)
/locus_tag="Rleg_6852"
/note="The C-terminal substrate binding domain of an
uncharacterized LysR-type transcriptional regulator
CrgA-like, contains the type 2 periplasmic binding fold;
Region: PBP2_CrgA_like_2; cd08471"
/db_xref="CDD:176160"
misc_feature complement(order(297428..297430,297509..297511,
297560..297562,297752..297754,297761..297763,
297803..297805,297920..297922,297932..297934))
/locus_tag="Rleg_6852"
/note="putative effector binding pocket; other site"
/db_xref="CDD:176160"
misc_feature complement(order(297533..297535,297542..297547,
297566..297580,297671..297673,297857..297877,
297881..297883,297893..297895,297902..297907,
297911..297916,297926..297931))
/locus_tag="Rleg_6852"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176160"
gene 298486..299157
/locus_tag="Rleg_6853"
/db_xref="GeneID:8022436"
CDS 298486..299157
/locus_tag="Rleg_6853"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; regulatory
protein LuxR; Sigma-70 region 4 type 2;
SMART: response regulator receiver; regulatory protein
LuxR;
KEGG: smd:Smed_5540 response regulator receiver protein"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_002984853.1"
/db_xref="GI:241666769"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR013249"
/db_xref="GeneID:8022436"
/translation="MYRMTSTVTTSNLGDQDRPTVFVVDDDISVRESLELLIGSAGWR
PLLFDSAHSFLEAPVLASPCCLVLDVNMPGLNGLDLQSMITISRSRMPIIFVSGFGDV
PTTVKALKGGALDFLTKPIETVAFLEAVSSALEQSAAMLRDESNLLALQGCYEALTKR
EREVMVRVVKGLLNKQVAYELDISEITVKAHRGQVMRKMCARTLPDLVNMAARLRLEE
PPEIH"
misc_feature 298534..299133
/locus_tag="Rleg_6853"
/note="Response regulator [Signal transduction
mechanisms]; Region: TtrR; COG4566"
/db_xref="CDD:34204"
misc_feature 298549..298887
/locus_tag="Rleg_6853"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(298558..298563,298690..298692,298714..298716,
298774..298776,298831..298833,298840..298845)
/locus_tag="Rleg_6853"
/note="active site"
/db_xref="CDD:29071"
misc_feature 298690..298692
/locus_tag="Rleg_6853"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(298699..298704,298708..298716)
/locus_tag="Rleg_6853"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 298840..298848
/locus_tag="Rleg_6853"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 298954..299124
/locus_tag="Rleg_6853"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(298957..298965,299002..299010,299032..299037,
299041..299046,299050..299064,299095..299097)
/locus_tag="Rleg_6853"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(298990..298992,298996..298998,299002..299004,
299095..299103,299110..299112,299119..299124)
/locus_tag="Rleg_6853"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene 299298..301958
/locus_tag="Rleg_6854"
/db_xref="GeneID:8022437"
CDS 299298..301958
/locus_tag="Rleg_6854"
/inference="protein motif:TFAM:TIGR00229"
/note="KEGG: smd:Smed_5522 PAS/PAC sensor signal
transduction histidine kinase;
TIGRFAM: PAS sensor protein;
PFAM: ATP-binding region ATPase domain protein; PAS fold-3
domain protein; PAS fold domain protein; PAS fold-4 domain
protein; histidine kinase A domain protein;
SMART: ATP-binding region ATPase domain protein; PAS
domain containing protein; PAC repeat-containing protein;
SNP /replace=C;
SNP /replace=G;
SNP /replace=C;
SNP /replace=T"
/codon_start=1
/transl_table=11
/product="PAS/PAC sensor signal transduction histidine
kinase"
/protein_id="YP_002984854.1"
/db_xref="GI:241666770"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000700"
/db_xref="InterPro:IPR001610"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR013655"
/db_xref="InterPro:IPR013656"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:8022437"
/translation="MSVELVRVLEALPGMAFTALPDGSIDFMNANLVDFLGLGEAVTV
WPLAASPADLRNTRQQWDALLSGREPFEITLPIGHPTAALQELHVRCKPLIENDRVER
WYGLATEGAHIASRPEIRDGAAAKALDNQTILESIPAGIGVLDSNGNVEAINGHLLQY
YGRSLDELRSWGRSDVVHPDDMQGLTKAIQQAVDKGTAYEAEVRLRRADGEYRWFQIV
GYPLADENGGIARWYALHIDVDDRRKAEDALRSNELELRNIVNAMPLTVWTSRPDGYC
DFVNDRWLEYAGLNAEQAEGSGWESVVHPEDASHLAKSWNASLASGRPADFEARMRGA
DGGYRWFLFRATPLLGEDGKIIKWYGTHIDIEDRKRAERALAERERESRLIVDGIAGM
IAIFSPDAQLIDGNQQILDYFERPLSELNDWSSNGITHPDDLQTCIDSFMGSIATGEP
YDYETRFLRHDGTWRWFQLRGLPLRDAEGEIVRWYGLLTDIDDRKRAEEKLRRSEAFL
ADAQRLSKTGSFLLNLGTSEVTWSAETYRIFEVDPTTPVTLDIVLSRLDRDSLATVEQ
VIDQANRGAGDFDYDITLITPSHSPKYVRVLAHSERNRDGDQELIGAVQDVTESRKAE
DALNRARSELSYVTRVTSLGVLTASIAHEVNQPLAGLVTNAETCLRVLASNPPNLDIA
KDTARRTIRDANRAADVIARLWELFSRKPPNLEAVDVNEIAEEVIALISSDLQHAKTS
LTADFANDLPRVTGARVQLQQVIMNLLRNSIEAMPAAGDRPRRIRLKTEGGLREIRLY
IEDTGVGFDPQGVDRIYDAFYTTKPDGMGIGLSVSRSIIENHHGRLWAEPNADHGATV
GFSVPTSASGDGESIGPSAVQTASDMQRNL"
misc_feature 299706..300014
/locus_tag="Rleg_6854"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature 299754..300005
/locus_tag="Rleg_6854"
/note="PAS fold; Region: PAS_3; pfam08447"
/db_xref="CDD:203948"
misc_feature order(299754..299756,299766..299768,299784..299786,
299823..299834,299910..299912,299925..299927)
/locus_tag="Rleg_6854"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(299814..299816,299826..299828,299850..299852,
299859..299864,299946..299948,299952..299954)
/locus_tag="Rleg_6854"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 300084..300392
/locus_tag="Rleg_6854"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature 300129..300383
/locus_tag="Rleg_6854"
/note="PAS fold; Region: PAS_3; pfam08447"
/db_xref="CDD:203948"
misc_feature order(300132..300134,300144..300146,300162..300164,
300201..300212,300288..300290,300303..300305)
/locus_tag="Rleg_6854"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(300192..300194,300204..300206,300228..300230,
300237..300242,300324..300326,300330..300332)
/locus_tag="Rleg_6854"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 300462..300770
/locus_tag="Rleg_6854"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature 300474..300770
/locus_tag="Rleg_6854"
/note="PAS domain; Region: PAS_9; pfam13426"
/db_xref="CDD:205604"
misc_feature order(300510..300512,300522..300524,300540..300542,
300579..300590,300666..300668,300681..300683)
/locus_tag="Rleg_6854"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(300570..300572,300582..300584,300606..300608,
300615..300620,300702..300704,300708..300710)
/locus_tag="Rleg_6854"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 300882..301880
/locus_tag="Rleg_6854"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature 301221..301406
/locus_tag="Rleg_6854"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(301233..301235,301245..301247,301257..301259,
301266..301268,301278..301280,301287..301289,
301350..301352,301362..301364,301371..301373,
301383..301385,301392..301394,301404..301406)
/locus_tag="Rleg_6854"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 301251..301253
/locus_tag="Rleg_6854"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 301572..301877
/locus_tag="Rleg_6854"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(301590..301592,301602..301604,301611..301613,
301692..301694,301698..301700,301704..301706,
301710..301715,301776..301787,301833..301835,
301839..301841,301854..301859,301863..301865)
/locus_tag="Rleg_6854"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 301602..301604
/locus_tag="Rleg_6854"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(301704..301706,301710..301712,301776..301778,
301782..301784)
/locus_tag="Rleg_6854"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 301955..302329
/locus_tag="Rleg_6855"
/db_xref="GeneID:8022438"
CDS 301955..302329
/locus_tag="Rleg_6855"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver;
SMART: response regulator receiver;
KEGG: smd:Smed_5521 response regulator receiver protein"
/codon_start=1
/transl_table=11
/product="response regulator receiver protein"
/protein_id="YP_002984855.1"
/db_xref="GI:241666771"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:8022438"
/translation="MTSRKRHVSVVDDDESVREALPDLLRSFGLSVEAFSSAEAFLNS
KSLQTSDGMILDVAMPGMTGPELQQELDRRGRRISIIFITAIKDEDVRSRLIREGACD
CLFKPFSADDLQDALRLASLID"
misc_feature 302006..302314
/locus_tag="Rleg_6855"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature 302006..302308
/locus_tag="Rleg_6855"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature order(302120..302122,302144..302146,302204..302206,
302261..302263,302270..302275)
/locus_tag="Rleg_6855"
/note="active site"
/db_xref="CDD:29071"
misc_feature 302120..302122
/locus_tag="Rleg_6855"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(302129..302134,302138..302146)
/locus_tag="Rleg_6855"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 302270..302278
/locus_tag="Rleg_6855"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 302468..305470
/locus_tag="Rleg_6856"
/db_xref="GeneID:8022439"
CDS 302468..305470
/locus_tag="Rleg_6856"
/inference="protein motif:TFAM:TIGR00229"
/note="KEGG: smd:Smed_5522 PAS/PAC sensor signal
transduction histidine kinase;
TIGRFAM: PAS sensor protein;
PFAM: ATP-binding region ATPase domain protein; PAS fold-3
domain protein; PAS fold domain protein; PAS fold-4 domain
protein; histidine kinase A domain protein;
SMART: ATP-binding region ATPase domain protein; histidine
kinase A domain protein; PAC repeat-containing protein;
PAS domain containing protein"
/codon_start=1
/transl_table=11
/product="PAS/PAC sensor signal transduction histidine
kinase"
/protein_id="YP_002984856.1"
/db_xref="GI:241666772"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000700"
/db_xref="InterPro:IPR001610"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR013655"
/db_xref="InterPro:IPR013656"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:8022439"
/translation="MGINVFQFFDALPGMAWTMLEDGQVDFVNRSWVEFTGLRPASGE
SWRWEDAVHPADVGAVTAHLQSVRHAETQGTIEARLRNAAGEFHHFLIQWAPLEDAPH
GVVNWCAVATNIEPVVQKRERSQAALDFQLVVDSIPIPVAVTTPAGEVEGLNQLTLSY
FGLSLSDLKDWKASEVVHPDDLKETIEAQIAAHMAGTSYNVESRHLRADGIYRWHNVL
GLPLRDQSGAIQRWLHLLIDIDDRKRAEVALANSERESRLIVGTIAGMVALFTPEGQL
NGANQQLLDYFQLPLEEVVNWATNGITHPDDLQHCVETFTASLKTGEPYDFETRFRRH
DGEFRWFQVRGHPVKDDNGGIVRWYGLLTDIDDGRRAVEALREREIELQLIVNSIPGL
IIVLRPDGAVESVNDQSLRYFGYDFNEHQKWKTNDIIHPDDRDRGVARFAEAVAAGQS
YEVVERLRRHDGVYRWFQVRGTPVRDYEGLVVRWYFLLNDIDDRKHAEVALANSEREF
RHIVNMVPGMIILSQPDGTLDGSNQQLLDYFGISLDEVQDWSTNGITHPDDVQVNIDT
FLGALKSGNPYDYQSRYRRHDGVFRWFQVRGQPLRDAEGKIVRWYGLLTDIDDRKQAE
DELRRSQALLVAGQRLIRTGTFSWHVETDELILSDEWLRILEFEKDEVVTFDRITERI
HPDDVALFAGKIGAVREGDEDSEYEVRVLARNGDIKYVRVIGEVIIHRNGNRECLGAI
QDVTQRRLTEEARDRLRTELARVTSILSLGQMSAAIAHEVNQPLSGIITNANTCLRML
AATPPDIETALETARRTIRDGNRATEVIARLRALFSKRNIEFEDVDINEAVSEVVALS
AGDQRRNGVAIRTHFATSLPPVNGDRVQLQQVINNLLRNAIDAVSGVKDRLRLVEIRT
QLGGDGQISVAVSDNGIGLDPDGGTRIFEAFYTTKNNGMGIGLSVCRSIIESHGGRLW
AEPNQGPGVTMHFSVPSAEEASITAASH"
misc_feature 302501..302809
/locus_tag="Rleg_6856"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature 302510..303205
/locus_tag="Rleg_6856"
/note="FOG: PAS/PAC domain [Signal transduction
mechanisms]; Region: AtoS; COG2202"
/db_xref="CDD:32384"
misc_feature order(302549..302551,302561..302563,302579..302581,
302618..302629,302705..302707,302720..302722)
/locus_tag="Rleg_6856"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(302609..302611,302621..302623,302645..302647,
302654..302659,302741..302743,302747..302749)
/locus_tag="Rleg_6856"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 302876..303184
/locus_tag="Rleg_6856"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(302924..302926,302936..302938,302954..302956,
302993..303004,303080..303082,303095..303097)
/locus_tag="Rleg_6856"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(302984..302986,302996..302998,303020..303022,
303029..303034,303116..303118,303122..303124)
/locus_tag="Rleg_6856"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 303185..305437
/locus_tag="Rleg_6856"
/note="hypothetical protein; Provisional; Region:
PRK13560"
/db_xref="CDD:106506"
misc_feature 303254..303562
/locus_tag="Rleg_6856"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(303302..303304,303314..303316,303332..303334,
303371..303382,303458..303460,303473..303475)
/locus_tag="Rleg_6856"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(303362..303364,303374..303376,303398..303400,
303407..303412,303494..303496,303500..303502)
/locus_tag="Rleg_6856"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 303632..303940
/locus_tag="Rleg_6856"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(303680..303682,303692..303694,303710..303712,
303749..303760,303836..303838,303851..303853)
/locus_tag="Rleg_6856"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(303740..303742,303752..303754,303776..303778,
303785..303790,303872..303874,303878..303880)
/locus_tag="Rleg_6856"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 304013..304318
/locus_tag="Rleg_6856"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(304058..304060,304070..304072,304088..304090,
304127..304138,304214..304216,304229..304231)
/locus_tag="Rleg_6856"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(304118..304120,304130..304132,304154..304156,
304163..304168,304250..304252,304256..304258)
/locus_tag="Rleg_6856"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 304388..304696
/locus_tag="Rleg_6856"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(304436..304438,304448..304450,304466..304468,
304508..304519,304595..304597,304610..304612)
/locus_tag="Rleg_6856"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(304499..304501,304511..304513,304535..304537,
304544..304549,304631..304633,304637..304639)
/locus_tag="Rleg_6856"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 304769..304963
/locus_tag="Rleg_6856"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(304781..304783,304793..304795,304805..304807,
304814..304816,304826..304828,304835..304837,
304898..304900,304910..304912,304919..304921,
304931..304933,304940..304942,304952..304954)
/locus_tag="Rleg_6856"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 304799..304801
/locus_tag="Rleg_6856"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 305120..305428
/locus_tag="Rleg_6856"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(305138..305140,305150..305152,305159..305161,
305243..305245,305249..305251,305255..305257,
305261..305266,305327..305338,305384..305386,
305390..305392,305405..305410,305414..305416)
/locus_tag="Rleg_6856"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 305150..305152
/locus_tag="Rleg_6856"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(305255..305257,305261..305263,305327..305329,
305333..305335)
/locus_tag="Rleg_6856"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 305656..306951
/locus_tag="Rleg_6857"
/db_xref="GeneID:8022440"
CDS 305656..306951
/locus_tag="Rleg_6857"
/inference="protein motif:PFAM:PF06441"
/note="PFAM: Epoxide hydrolase domain protein; alpha/beta
hydrolase fold;
KEGG: smd:Smed_5519 epoxide hydrolase domain protein"
/codon_start=1
/transl_table=11
/product="Epoxide hydrolase domain protein"
/protein_id="YP_002984857.1"
/db_xref="GI:241666773"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="InterPro:IPR001202"
/db_xref="InterPro:IPR006311"
/db_xref="InterPro:IPR010497"
/db_xref="GeneID:8022440"
/translation="MSRVEPKVTRRTLLTIAASASAIGVFPKAFAATGTESGLRPFKF
TASKDQLADLNRRVAATRWPDEENVTDDGQGVRLDTIKKLANHWKTHDWRKVEDRINS
LPQFLTEIDGLDIHFIHVRSKHDNALPIIITHGWPGSVIEQMKIIKPLTDPTAFGGTE
ADAFHVVIPSLPGYGFSAKPRDAKWTPPRIAKAWAVLMQRLDYAKYVAQGGDWGNAVT
ELMAVQEPAGLLGIHTNMAATVPAEITKALAAGTPPSTLTADEKRAYDQLDDFNKNGL
GYAIEMNNRPQTLYGIVDSPIGLAAWMLDHDIRSYRMIARSFDGEHEGLTPDDVLDNI
TLYWLTNTAISSARLYWANAHFPSGGFFDPRGIKIPVAVSAFPDEIYQAPQSWAEKAY
PKLIHYNRLPKGGHFAAWEQPELFTSELRAAFKPLRDQI"
sig_peptide 305656..305751
/locus_tag="Rleg_6857"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 32;
SNP /replace=G"
misc_feature 305776..306096
/locus_tag="Rleg_6857"
/note="Epoxide hydrolase N terminus; Region: EHN;
pfam06441"
/db_xref="CDD:203452"
misc_feature 306007..306930
/locus_tag="Rleg_6857"
/note="Predicted hydrolases or acyltransferases
(alpha/beta hydrolase superfamily) [General function
prediction only]; Region: MhpC; COG0596"
/db_xref="CDD:30941"
gene complement(307721..309601)
/locus_tag="Rleg_6858"
/db_xref="GeneID:8022441"
CDS complement(307721..309601)
/locus_tag="Rleg_6858"
/inference="protein motif:TFAM:TIGR02074"
/note="TIGRFAM: penicillin-binding protein, 1A family;
PFAM: glycosyl transferase family 51; penicillin-binding
protein transpeptidase; BA14K family protein;
KEGG: rec:RHECIAT_CH0001201 penicillin binding protein B"
/codon_start=1
/transl_table=11
/product="penicillin-binding protein, 1A family"
/protein_id="YP_002984858.1"
/db_xref="GI:241666774"
/db_xref="InterPro:IPR001264"
/db_xref="InterPro:IPR001460"
/db_xref="InterPro:IPR011816"
/db_xref="InterPro:IPR012413"
/db_xref="GeneID:8022441"
/translation="MGSALLVCLLVCSVLLWALKDVPWSEIRDGTLKPVVVLETADGA
PLVRQGPYQGPYARYDQFPPNLIDAVLSIEDRRFMDHFGIDPKGIGRALLRNLEAGSV
VEGGSTITQQLIKLQYLDSDRTIKRKIQEVVIAVWLEWKLGKREILTRYLNSVYLGAG
ATGMPAAARIYFNKDIGGLTLSESAMLAGLLRAPSQWNPIDNFDGARQRTMVVLDAMA
ANGKITTPQLEEAKTSFARLQPTTPTPRSGSWFADWISPQASEIAGSSPGSTAVRTTL
VPRLQQIAEKVVKRALDSEGKTVGASQAALVAMTPDGAVVAMVGGHDYKASQFNRAVT
AMRQPGSTFKLFVYYAALKAGLTLSDRVLDAPIDIDGWAPENSGGNYRGWVTLAEAFA
RSLNAASVALAEEVGLDNVIAAARELGIDAPLPNTPSLALGTSEVNLLNLTSAYASVQ
LGRAPVRPWGIIDFQAAGQPKAFRVGSQAKPNVDLSPYQSDLIGLLQLVVERGTGRGA
DPGTFAAGKTGTSQNNRDAWFVGFTQALVVGVWVGNDDDTPMKGVTGGTLPAHVWRDF
MREATAESALSGVQSTEDANNGQGAPPSCNITACSRAYRSFRPSDCTYQPYSGGRRLC
EK"
sig_peptide complement(309545..309601)
/locus_tag="Rleg_6858"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.853) with cleavage site probability 0.833 at
residue 19"
misc_feature complement(308948..309478)
/locus_tag="Rleg_6858"
/note="Transglycosylase; Region: Transgly; pfam00912"
/db_xref="CDD:201501"
misc_feature complement(307886..309445)
/locus_tag="Rleg_6858"
/note="penicillin-binding protein, 1A family; Region:
PBP_1a_fam; TIGR02074"
/db_xref="CDD:211713"
misc_feature complement(307901..308692)
/locus_tag="Rleg_6858"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; cl01009"
/db_xref="CDD:207282"
misc_feature complement(307730..307819)
/locus_tag="Rleg_6858"
/note="BA14K-like protein; Region: BA14K; pfam07886"
/db_xref="CDD:203793"
gene 310346..312334
/locus_tag="Rleg_6859"
/db_xref="GeneID:8022442"
CDS 310346..312334
/locus_tag="Rleg_6859"
/inference="protein motif:PFAM:PF01594"
/note="PFAM: protein of unknown function UPF0118;
KEGG: smd:Smed_5154 protein of unknown function UPF0118"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984859.1"
/db_xref="GI:241666775"
/db_xref="InterPro:IPR002549"
/db_xref="GeneID:8022442"
/translation="MSSSDAKITEAELENDLGPRRVYSTSPSAPSRMPAFASVLAVIA
ILYFGKEVLLPLAIAVLLTFALAPISSRLRKLGMPRIPAVIVTVVIAFLVLVLFGLVV
AGHVAEVAQNLPAYQGNIIAKIRSLQESGTDSGIVRRLTSVVESVGRELSNAEQRPGA
PGTGSRPREPVLVEIFAPSRPIETLTSLIGPLLGPIASLGLIIVVVIFMLLEREELRD
RFIRLVGYGDLHRTTEAIQEAGSRVAQYLLMQLVVNCAYGVPLALGLWAVGIPNPALW
GMLAIVLRFVPYIGPVIATVLPLFLAFAVDPGWSLVLWVGAIFLVLELTSNNVIEPWL
YGSRTGLSPLAIIVAAIFWAWLWGPVGLVLSTPLTVCLAVLGRYVPQFEFLEVVFGSD
PVLDPKERLYQRLLAGDPDEATDYAEEFLEEDYLEDYYGKVAIPALLLAEKDRRRGVL
TAEQMEQVFGTAITLVSNLAEIAQEEEQEEEEEEEQKEAAGRPSPPKEGNGDESELPD
GRGKTVFCVGGRGPLDDASAAMLAQILQVQGAEVVAARHSDIPNRRAMSLVPKQSNAI
VVCFLNEDSTRHATILVRRFKRIYPAIRVGAVLWAENQKERQPPALGEADFVATTLTS
AAREALADAPPSLVTTARKIRTRRSSNKTGIAAARSGI"
misc_feature 310460..311527
/locus_tag="Rleg_6859"
/note="Predicted permease, member of the PurR regulon
[General function prediction only]; Region: yhhT; COG0628"
/db_xref="CDD:30973"
misc_feature 310487..311455
/locus_tag="Rleg_6859"
/note="pheromone autoinducer 2 transporter; Reviewed;
Region: tqsA; cl00465"
/db_xref="CDD:207060"
gene complement(312612..313043)
/locus_tag="Rleg_6860"
/pseudo
/db_xref="GeneID:8022443"
gene 313318..313881
/locus_tag="Rleg_6861"
/pseudo
/db_xref="GeneID:8022444"
gene 313895..314362
/locus_tag="Rleg_6862"
/pseudo
/db_xref="GeneID:8022445"
gene 314372..314812
/locus_tag="Rleg_6863"
/db_xref="GeneID:8022446"
CDS 314372..314812
/locus_tag="Rleg_6863"
/inference="protein motif:PFAM:PF04239"
/note="PFAM: protein of unknown function DUF421;
KEGG: mes:Meso_3510 conserved hypothetical
membrane-anchored protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984860.1"
/db_xref="GI:241666776"
/db_xref="InterPro:IPR007353"
/db_xref="GeneID:8022446"
/translation="MDAVFRGLAIYFTLLIIIRLSGRRTLAQMTPFDLVIVLVISETT
QQAMLGDDFSITNAVLLILTLFTTDIGLSYVKRWWKQAGHVIDGVPTILVTDGVYDRE
ALGGCRLDSEDVMEAARSQGIESVKDIKFAILEVSGNISIVKKN"
misc_feature 314372..>314806
/locus_tag="Rleg_6863"
/note="Predicted membrane protein [Function unknown];
Region: COG2323"
/db_xref="CDD:32477"
gene complement(315601..316176)
/locus_tag="Rleg_6864"
/db_xref="GeneID:8022447"
CDS complement(315601..316176)
/locus_tag="Rleg_6864"
/inference="similar to AA sequence:KEGG:Smed_3722"
/note="KEGG: smd:Smed_3722 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984861.1"
/db_xref="GI:241666777"
/db_xref="GeneID:8022447"
/translation="MKPLQQGDLFAASEVELPEGFRYEAAVVPDFEQSRLVEYVSSLP
LKPFDFHGFEGKRRVVSFGWKYDFETERMRPAEDIPDFLLPVRALAAGFAGIEANQLQ
QALITEYAQGAPIGWHRDKKVFGRVVGVSLLAPCTFRLRRRAGAKWERFSLRVEPGSA
YLLSGPARNEWEHSIPPVDTLRYSITFREIG"
misc_feature complement(315613..316161)
/locus_tag="Rleg_6864"
/note="Alkylated DNA repair protein [DNA replication,
recombination, and repair]; Region: AlkB; COG3145"
/db_xref="CDD:32959"
gene complement(316328..316777)
/locus_tag="Rleg_6865"
/db_xref="GeneID:8022448"
CDS complement(316328..316777)
/locus_tag="Rleg_6865"
/inference="similar to AA sequence:KEGG:Rsph17025_4126"
/note="KEGG: rsq:Rsph17025_4126 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984862.1"
/db_xref="GI:241666778"
/db_xref="GeneID:8022448"
/translation="MVTMVGNESDIKGLVKDLIYLEYDAIAAYDSCIERLDDKQFATK
ITSFKQDHLQHLEVLNEMARELGIQAPTRGDMKEMLTTGKIALADLMGDAAILKAMKT
NEDDTVTAYERASRHEDAIPASKAFFMKAHQDEERHRAWMDTTAKAL"
misc_feature complement(316352..316738)
/locus_tag="Rleg_6865"
/note="Ferritin-like superfamily of diiron-containing
four-helix-bundle proteins; Region: Ferritin_like;
cd00657"
/db_xref="CDD:153097"
misc_feature complement(order(316364..316366,316373..316375,
316466..316468,316613..316615,316622..316624,
316712..316714))
/locus_tag="Rleg_6865"
/note="dinuclear metal binding motif [ion binding]; other
site"
/db_xref="CDD:153097"
gene 317228..317755
/locus_tag="Rleg_6866"
/db_xref="GeneID:8022449"
CDS 317228..317755
/locus_tag="Rleg_6866"
/inference="protein motif:TFAM:TIGR02937"
/note="TIGRFAM: RNA polymerase sigma factor, sigma-70
family;
PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4
type 2;
KEGG: ret:RHE_PF00052 RNA polymerase sigma-E factor"
/codon_start=1
/transl_table=11
/product="RNA polymerase, sigma-24 subunit, ECF subfamily"
/protein_id="YP_002984863.1"
/db_xref="GI:241666779"
/db_xref="InterPro:IPR000838"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="GeneID:8022449"
/translation="MSGLTGTGATLEQDIVALMPAVRRFAMRLERSATDADDLTQDTM
VKALAHVDQFQPGTNLKSWLFTIARNTYCTKYRMRRRYTLHADMEVAGSGQAVQSTQE
WSLRRGEVDKAISALDVDKRRVSLMAISGESYKDIAGACGCGLGTIKSRIARGRAAVI
ATLGETTAAGAVAAR"
misc_feature 317252..317737
/locus_tag="Rleg_6866"
/note="DNA-directed RNA polymerase specialized sigma
subunit, sigma24 homolog [Transcription]; Region: RpoE;
COG1595"
/db_xref="CDD:31783"
misc_feature 317270..317470
/locus_tag="Rleg_6866"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature 317546..317704
/locus_tag="Rleg_6866"
/note="Sigma-70, region 4; Region: Sigma70_r4_2;
pfam08281"
/db_xref="CDD:203898"
misc_feature order(317579..317581,317609..317611,317624..317629,
317657..317659,317663..317668,317672..317680,
317684..317689,317693..317695)
/locus_tag="Rleg_6866"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 318117..319118
/locus_tag="Rleg_6867"
/db_xref="GeneID:8022450"
CDS 318117..319118
/locus_tag="Rleg_6867"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR
domain protein;
KEGG: sme:SM_b20076 short chain dehydrogenase"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase"
/protein_id="YP_002984864.1"
/db_xref="GI:241666780"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8022450"
/translation="MKTQKKVVVITGASSGIGQATAEAFAREGANLVIAARNAVALQA
VANTCRELGADVIVVPTDVTDAQQVKALAEAALGVGPIDVWVSNVGVGAVGKFQDTPI
EAHEQVIRANLIGHMNDAHAVLPIFLDQDHGVFINMISLGGFAGAPYATAYSASKFGL
KGFSEALRGELANHPNIHICDIYPAFMDTPGISHGANYTGRKLSAPPPVYDARKVAEA
VVRVSRHPKVTTTVGATADLIRVGHFFAPRLSARLMNWFMTTYFRQADSGPMTDGNLF
APSTRPGGIDGGLRSRTQRVALGAVAATVAVGLGLLAVANTYNRNSRRIQRRYRRGI"
sig_peptide 318117..318185
/locus_tag="Rleg_6867"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.973 at
residue 23"
misc_feature 318132..318878
/locus_tag="Rleg_6867"
/note="short chain dehydrogenase; Provisional; Region:
PRK06181"
/db_xref="CDD:180447"
misc_feature 318135..318824
/locus_tag="Rleg_6867"
/note="classical (c) SDR, subgroup 3; Region: SDR_c3;
cd05360"
/db_xref="CDD:187618"
misc_feature order(318150..318152,318156..318167,318222..318230,
318297..318305,318378..318386,318447..318449,
318528..318536,318573..318575,318585..318587,
318666..318677,318681..318686)
/locus_tag="Rleg_6867"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187618"
misc_feature order(318450..318452,318534..318536,318573..318575,
318585..318587)
/locus_tag="Rleg_6867"
/note="active site"
/db_xref="CDD:187618"
gene 319152..319871
/locus_tag="Rleg_6868"
/db_xref="GeneID:8022451"
CDS 319152..319871
/locus_tag="Rleg_6868"
/inference="similar to AA sequence:KEGG:Mext_4153"
/note="KEGG: mex:Mext_4153 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984865.1"
/db_xref="GI:241666781"
/db_xref="GeneID:8022451"
/translation="MTTYPPLDILKPIGQGIWIVDSGPLHAGGVIPLPVRMTIMQLSD
GSTLLHSPTRFDQALRLEIERVGPIRHIVAPNSAHWSFVKDWKGRVPEALVWAAPGLR
QRRQVKKARIPWHGDLGDASQAHWTADIDQIEVPGIGGFSEVCLFHRNSQALVVTDLI
QNLDDHQQSPWMRLFSSLVGARERAPIYLRAVVQLRGEPAKAAARRLVALEPKLVIFS
HGRYIDQDAPARLRKSLDWLV"
misc_feature 319251..>319631
/locus_tag="Rleg_6868"
/note="Domain of unknown function (DUF4336); Region:
DUF4336; pfam14234"
/db_xref="CDD:206402"
gene complement(320115..320373)
/locus_tag="Rleg_6869"
/pseudo
/db_xref="GeneID:8022452"
gene 320505..322406
/locus_tag="Rleg_6870"
/db_xref="GeneID:8022453"
CDS 320505..322406
/locus_tag="Rleg_6870"
/inference="protein motif:PFAM:PF02705"
/note="PFAM: K potassium transporter;
KEGG: mlo:mll1417 potassium uptake protein Kup"
/codon_start=1
/transl_table=11
/product="K potassium transporter"
/protein_id="YP_002984866.1"
/db_xref="GI:241666782"
/db_xref="InterPro:IPR000209"
/db_xref="InterPro:IPR003855"
/db_xref="GeneID:8022453"
/translation="MTSTQMRSEDPELGEETRGGLPSLVLAALGVVYGDIGTSPLYAF
REALHATGGSGAHQENVLGILSLIIWALTIVVTLKYVTFVLKADNRGEGGTLSLMSLA
RESLRGRPKWVLVLGVTGASLFLGDAIITPAISVLSAVEGIQVVAPALTNWVVPITLT
IIAALFFVQRFGTGGVAAVFGPITALWFVVLGVSGAIHILDDPSVLGAINPVHAVWYV
AYNIASAVAVFGAVFLAVTGAEALYVDLGHFGRRPIVVAWFALVFPSLLLNYFGQGAF
VLANPTMAAHPFFNMHPEWARIPMVCLATAATVIASQAVISGAYSLVRQAIHLNLLPR
LQILHTSETHSGQIYMPRVNTLLFVFVAALVLFFRSSSGLSAAYGIAVTGEMLITSVL
LFVVMRRIWSWKLATTLAVIIPISLIDAGFLAANIAKFADGGWVPVAVAATMALIMQT
WTAGRRLLISRTKADEIPLATIIDNLARKKPPTVPGTAIFLTSDVEGAPTALLHSLKH
YKVLHERNVILSVVTATTPFVPDTEKIFLESFNPLFSRIVVTFGYMETPNIPRALVLA
RKLGLKFDIMSTSFFLSRRTILPSRKGGLPFWQDRLFIALSRNASNATDYFGLPTGRV
VELGLQTTI"
misc_feature 320562..322403
/locus_tag="Rleg_6870"
/note="K+ transporter [Inorganic ion transport and
metabolism]; Region: Kup; COG3158"
/db_xref="CDD:32972"
gene 323099..323596
/locus_tag="Rleg_6871"
/db_xref="GeneID:8022454"
CDS 323099..323596
/locus_tag="Rleg_6871"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: atc:AGR_L_3014 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984867.1"
/db_xref="GI:241666783"
/db_xref="GeneID:8022454"
/translation="MKKFATAVVISMALVFSAPAFAKNEGKLPKSAVELSEQEVKDLY
LGHTVKYDVGDGLVYYTWFADGTLKGVKVGKKKGEYGYAEGTWTGTGNTFCFTSNWKG
KSGETKFVYSPCKGWWRVGKQIWTKNISGDDQYDGDIYNGEVKKMSKGDKVTPMFDKA
KAAAK"
sig_peptide 323099..323167
/locus_tag="Rleg_6871"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 23"
gene complement(323707..323928)
/locus_tag="Rleg_6872"
/db_xref="GeneID:8022455"
CDS complement(323707..323928)
/locus_tag="Rleg_6872"
/inference="similar to AA sequence:KEGG:RHECIAT_CH0000185"
/note="KEGG: rec:RHECIAT_CH0000185 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984868.1"
/db_xref="GI:241666784"
/db_xref="GeneID:8022455"
/translation="MDFALLFNMFRKPRQANVTDVTLWHKHETLLPVPLVDAASRNPS
GQIWRRLNGVQWEYKQDPETIEEFDARQY"
gene complement(324184..325554)
/locus_tag="Rleg_6873"
/db_xref="GeneID:8022456"
CDS complement(324184..325554)
/locus_tag="Rleg_6873"
/inference="protein motif:PFAM:PF02056"
/note="PFAM: glycoside hydrolase family 4;
KEGG: rec:RHECIAT_PA0000101 alpha-galactosidase protein"
/codon_start=1
/transl_table=11
/product="glycoside hydrolase family 4"
/protein_id="YP_002984869.1"
/db_xref="GI:241666785"
/db_xref="InterPro:IPR001088"
/db_xref="GeneID:8022456"
/translation="MARNPKITFIGAGSTVFMKNIVGDVLQRPALSGATIALMDLNPQ
RLEESAIVVNKLISTLGVKAKAETYSDQRKALSGADFVVVAFQIGGYEPCTVTDFEVP
KKYGLRQTIADTLGVGGIMRGLRTVPHLWKVCEDMLAVCPEAIMLQYVNPMAINTWAI
SEKYPTIRQVGLCHSVQGTAMELAHDLEIPYEEIRYRAAGINHMAFYLKFEHRQADGS
YRDLYPDLVRAYREGRAPKPGWNPRCPNKVRYEMLTRLGYFVTESSEHFAEYTPYFIK
EGRDDLIEKFGIPLDEYPKRCIEQIERWKGQAEAYRSADKIEVKPSKEYASSIINSVW
TGEPSVIYGNVRNNGCITSLPANCAAEVPCLVDASGIQPTFIGDLPPQLTALIRTNIN
VQELTVQALMTENREHIYHAAMMDPHTAAELDLDQIWSLVDDLLATHGDWLPEWARTA
RKVQAA"
misc_feature complement(324214..325545)
/locus_tag="Rleg_6873"
/note="alpha-galactosidase; Provisional; Region: PRK15076"
/db_xref="CDD:185035"
misc_feature complement(324247..325542)
/locus_tag="Rleg_6873"
/note="Glycoside Hydrolases Family 4; Alpha-glucosidases
and alpha-galactosidases; Region:
GH4_alpha_glucosidase_galactosidase; cd05297"
/db_xref="CDD:133433"
misc_feature complement(order(325039..325041,325102..325104,
325108..325110,325168..325170,325207..325209,
325282..325287,325294..325302,325420..325422,
325432..325437,325513..325518))
/locus_tag="Rleg_6873"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:133433"
misc_feature complement(order(324757..324759,324766..324768,
324946..324948,325036..325038,325102..325104,
325207..325209))
/locus_tag="Rleg_6873"
/note="sugar binding site [chemical binding]; other site"
/db_xref="CDD:133433"
misc_feature complement(order(324946..324948,325036..325038))
/locus_tag="Rleg_6873"
/note="divalent metal binding site [ion binding]; other
site"
/db_xref="CDD:133433"
misc_feature complement(order(324430..324441,324445..324447,
324451..324456,324511..324513,324547..324549,
324898..324900,324922..324924,324970..324972,
324979..324981))
/locus_tag="Rleg_6873"
/note="putative tetramer (dimer of dimers) interface
[polypeptide binding]; other site"
/db_xref="CDD:133433"
misc_feature complement(order(324277..324279,324283..324285,
324289..324291,324295..324297,324310..324315,
324322..324327,324334..324336,324340..324342,
324358..324360,324370..324372,324379..324381,
324391..324393,324400..324402,324412..324417,
324751..324753,324787..324789))
/locus_tag="Rleg_6873"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133433"
gene complement(325577..327244)
/locus_tag="Rleg_6874"
/db_xref="GeneID:8022457"
CDS complement(325577..327244)
/locus_tag="Rleg_6874"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: AAA ATPase;
KEGG: ret:RHE_PE00093 peptide ABC transporter, ATP-binding
protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984870.1"
/db_xref="GI:241666786"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022457"
/translation="MALALVNSFAPPVRHDHDGRSDTPVIDARNVAVNFKVEDGMVEA
VKDVSFQLYRGETIAIVGESGSGKSVTARTVMGLLSKRAVVSEKSTVAYDGSNILKFS
ERERRKLRGDRISMIFQEPMSSLNPIYTIGSQIVEAIRVHRRISKRDAQKRALELLEH
VQIPDPAARLMQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNL
IRNLQKELGMAVILITHDLTVVRQFSDYVYVMQYGEVREHNTTEALFANPQDAYTKHL
LASEPRGEANPLPEGSDVILDAKGVRVSFMMRHGTFLKPAMRELVAVDSLDLTLRRHE
TLGLVGESGSGKTTFGQAILRLNTPDSGEIRFDNQPIHGLSRAEMRPLRARMQVVFQD
PFSSLNPRMTIGQIIEEGLVVNRLGATKAERQDRVREALVAAGMPGNILSRFPHEFSG
GQRQRIAIARAIALEPEFILLDEPTSALDLSVQAQIIELLRKLQDERGLSYLFISHDL
KVVRALCHRVIVMQHGKIVEEGPVNEVLSHPKTAYTERLVKAAFEVA"
misc_feature complement(325580..327187)
/locus_tag="Rleg_6874"
/note="ABC-type uncharacterized transport system,
duplicated ATPase component [General function prediction
only]; Region: COG4172"
/db_xref="CDD:33913"
misc_feature complement(326468..327172)
/locus_tag="Rleg_6874"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature complement(327038..327061)
/locus_tag="Rleg_6874"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(order(326540..326542,326639..326644,
326888..326890,327035..327043,327047..327052))
/locus_tag="Rleg_6874"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature complement(326888..326899)
/locus_tag="Rleg_6874"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature complement(326687..326716)
/locus_tag="Rleg_6874"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature complement(326639..326656)
/locus_tag="Rleg_6874"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature complement(326621..326632)
/locus_tag="Rleg_6874"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(326534..326554)
/locus_tag="Rleg_6874"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
misc_feature complement(325655..326362)
/locus_tag="Rleg_6874"
/note="The ABC transporter subfamily specific for the
transport of dipeptides, oligopeptides (OppD), and nickel
(NikDE). The NikABCDE system of E. coli belongs to this
family and is composed of the periplasmic binding protein
NikA, two integral membrane...; Region:
ABC_NikE_OppD_transporters; cd03257"
/db_xref="CDD:73016"
misc_feature complement(326204..326227)
/locus_tag="Rleg_6874"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(order(325727..325729,325826..325831,
326072..326074,326201..326209,326213..326218))
/locus_tag="Rleg_6874"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73016"
misc_feature complement(326072..326083)
/locus_tag="Rleg_6874"
/note="Q-loop/lid; other site"
/db_xref="CDD:73016"
misc_feature complement(325874..325903)
/locus_tag="Rleg_6874"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73016"
misc_feature complement(325826..325843)
/locus_tag="Rleg_6874"
/note="Walker B; other site"
/db_xref="CDD:73016"
misc_feature complement(325808..325819)
/locus_tag="Rleg_6874"
/note="D-loop; other site"
/db_xref="CDD:73016"
misc_feature complement(325721..325741)
/locus_tag="Rleg_6874"
/note="H-loop/switch region; other site"
/db_xref="CDD:73016"
gene complement(327255..328388)
/locus_tag="Rleg_6875"
/db_xref="GeneID:8022458"
CDS complement(327255..328388)
/locus_tag="Rleg_6875"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: rec:RHECIAT_PA0000099 probable peptide ABC
transporter, permease protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984871.1"
/db_xref="GI:241666787"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022458"
/translation="MLAFDSSATPPTTDIVTKPSRGHESYIALVWRRLRRSWTGMAGL
VLVALLILMAIFADFFAPMDPKATDVGFAPPQVMSFHDKDGDFVFQPRVYALSDSEEL
DPVTFQPIVGIDYDNPRLLGFFVKGAEYRLFGLIPASRHFFGSTDGQPVHFLGTDKFG
RDVLSRAIIGSRISLTIALTVVFIVTIIGTTVGMVSGYFGGTFDVWLQRFVDLVLAFP
QLPLYLALTSLIPVTAPTNVFLAFVIVVMSALGWAQMSREVRGKTLALARIDYVRAAM
AVGATDTRIIMQHIFPNVMSHVIVAVTLHIPSVVLLESFLGFLGFAVKPPLISWGLML
QDTATYSVIGSYPWILAPVGFVLVTVFAFNALGDGLRDAVDPY"
misc_feature complement(327261..>327947)
/locus_tag="Rleg_6875"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppC; COG1173"
/db_xref="CDD:31366"
misc_feature complement(327360..327875)
/locus_tag="Rleg_6875"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(327360..327362,327390..327395,
327435..327440,327447..327458,327477..327479,
327486..327491,327531..327533,327582..327584,
327591..327596,327606..327608,327612..327617,
327624..327626,327630..327632,327636..327641,
327708..327710,327714..327719,327726..327755,
327759..327770,327798..327800,327813..327818,
327825..327830))
/locus_tag="Rleg_6875"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(327441..327458,327708..327752))
/locus_tag="Rleg_6875"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(327360..327362,327390..327392,
327399..327401,327438..327440,327654..327656,
327708..327710))
/locus_tag="Rleg_6875"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(327510..327512,327522..327527,
327543..327581))
/locus_tag="Rleg_6875"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(328390..329397)
/locus_tag="Rleg_6876"
/db_xref="GeneID:8022459"
CDS complement(328390..329397)
/locus_tag="Rleg_6876"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transport systems
inner membrane component;
KEGG: rec:RHECIAT_PA0000098 probable peptide ABC
transporter, permease protein"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transport systems
inner membrane component"
/protein_id="YP_002984872.1"
/db_xref="GI:241666788"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8022459"
/translation="MLRFLLVRIASAIPVLFILSVVTFAIIQAPPGDYADYIRSQLIN
QGGASYAQAEEQAQAYRVEHGLDKPLVVQYVNWIGGIVTRGDFGYSMFYNKPVADVVG
ERLPRTLLLALVCHLFASVLGIGFGIWAATRQYSWIDSLLSGISFLGMTVPRFLMALI
IVYLLVFQLNVSEIGSFFSPQYGGAPWSWAKFVDLVHHVWPVVAIATFGGLAYNMRVM
RGNLLDTLNAQYVETAKAKGLSGAAVVMRHAVPNALHPLVMYQGVVLPYMLTGEIETA
IIFALPTVGPAIVGSMAVGDVYVTATFMMVLSATLIIGNIIADMLLALLDPRVRQYGG
A"
misc_feature complement(328408..329397)
/locus_tag="Rleg_6876"
/note="ABC-type dipeptide/oligopeptide/nickel transport
systems, permease components [Amino acid transport and
metabolism / Inorganic ion transport and metabolism];
Region: DppB; COG0601"
/db_xref="CDD:30946"
sig_peptide complement(329320..329397)
/locus_tag="Rleg_6876"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.886) with cleavage site probability 0.776 at
residue 26"
misc_feature complement(328447..329085)
/locus_tag="Rleg_6876"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(328447..328452,328459..328464,
328471..328476,328480..328485,328492..328497,
328525..328530,328567..328572,328579..328590,
328609..328611,328618..328623,328663..328665,
328714..328716,328723..328728,328741..328743,
328747..328752,328759..328761,328765..328767,
328771..328776,328912..328914,328918..328923,
328930..328959,328963..328974,329005..329007,
329020..329025,329032..329037))
/locus_tag="Rleg_6876"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(328573..328590,328912..328956))
/locus_tag="Rleg_6876"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(328495..328497,328525..328527,
328534..328536,328570..328572,328789..328791,
328912..328914))
/locus_tag="Rleg_6876"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(328642..328644,328654..328659,
328675..328713))
/locus_tag="Rleg_6876"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(329516..331603)
/locus_tag="Rleg_6877"
/db_xref="GeneID:8022460"
CDS complement(329516..331603)
/locus_tag="Rleg_6877"
/inference="protein motif:PFAM:PF00496"
/note="PFAM: extracellular solute-binding protein family
5;
KEGG: rec:RHECIAT_PA0000097 alpha-galactoside ABC
transporter, substrate-binding protein"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 5"
/protein_id="YP_002984873.1"
/db_xref="GI:241666789"
/db_xref="InterPro:IPR000914"
/db_xref="GeneID:8022460"
/translation="MMNFRNAGILAGLALSVSAAALNAYASEPTVPPAPADFPAEGKI
NYVARDSILEFKALPEYHEPDWVTKNFVATGKLPPVKDRLPKEPMVFKTGNMPDGIGV
YGDTMRHVIGGRPEGWNYGAGQTQGWGGIDIGLSECLTRTAPLFQVQASDTEPLPNLA
KSWDWSQDGHKLTMHLVEGAKWSDGAPFNADDIMFYWDDEVVDPNVSPLGGGASPEAF
GVGTTLKKVDDYTVEWTFKEAFPKQYLYTMSYPNFCPGPSHILKPKHPKYSKNTYDQF
KNAFPPEFMNMPVMGAWVPVEYRSDDIIVMRRNPYYWKVDEKGDQLPYLNELHYKLST
WADRDVQAVAGSADFSNLEQPENFVASLKRAAEKTAPARLAFGPRLIGYNLRMNFSAN
GWGNPDERGEAIRELNRNEDFRKAVTMALDRKAIGDSLVKGPFTAIYPGGLSSGTSFY
DRNSTVYYPFDLKGAKEELAKAGLKDTDGNGVVNFPAGTLGGKDVEIVMLINNQYTTD
KSLAEGVVGQMEKLGLKIVINALDGAKRDDAHYAGRFDWLIQRNTTELSSVVQNTEQL
APVGPRTSWHHRAGKDDQLDLMPFEKELVDVVNKFRTSQSNDERVDLMKQYQKISTEH
VNTVGLTEYPGALIVNKRFSNVPQGTPIMMFNWAEDSVIRERLWVAADKQGKYELFPE
QLPGKPGDKGPIN"
sig_peptide complement(331523..331603)
/locus_tag="Rleg_6877"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.979 at
residue 27"
misc_feature complement(329666..331351)
/locus_tag="Rleg_6877"
/note="The substrate-binding component of an
uncharacterized ABC-type
nickel/dipeptide/oligopeptide-like import system contains
the type 2 periplasmic binding fold; Region:
PBP2_NikA_DppA_OppA_like_4; cd08500"
/db_xref="CDD:173865"
misc_feature complement(329966..331144)
/locus_tag="Rleg_6877"
/note="Bacterial extracellular solute-binding proteins,
family 5 Middle; Region: SBP_bac_5; pfam00496"
/db_xref="CDD:201265"
gene complement(331728..333194)
/locus_tag="Rleg_6878"
/db_xref="GeneID:8022461"
CDS complement(331728..333194)
/locus_tag="Rleg_6878"
/inference="protein motif:PFAM:PF02056"
/note="PFAM: glycoside hydrolase family 4;
KEGG: rec:RHECIAT_PA0000096 alpha-galactosidase protein"
/codon_start=1
/transl_table=11
/product="glycoside hydrolase family 4"
/protein_id="YP_002984874.1"
/db_xref="GI:241666790"
/db_xref="InterPro:IPR001088"
/db_xref="GeneID:8022461"
/translation="MSFKIAIIGAGSVGFTKKLFTDILCVPEFRDVEFALTDLSEHNL
EMIKAILDRVVEANGLPTKVTATTNRRQALEGARYIISCVRVGGLEAYADDIGIPLKY
GIDQCVGDTICAGGILYGQRNIPVILDFCKDIREVAEPGAKFLNYANPMAMNTWAAIE
YGKVDTVGLCHGVQHGAEQIAEVLGAKSLSELDYICSGINHQTWFIDLRLNGRRIGKD
ELIAAFEAHPVYSQQEKLRIDVLKRFGVYSTESNGHLSEYLPWYRKRPDEITRWIDMS
DWIHGETGGYLRHSTETRNWFETEYPQFLESAAKPIDPAKRSNEHASHILEALETNRV
YRGHFNLKNNGVITNLPSDAIIESPGFVDRFGINMVSGVTLPEACAATCIASINVQRM
SVHAAISGDIDLLKLAVLHDPLVGAVSTPEEVWQMVDEMVVAQARWLPQYAHAVPAAK
ERLSKSKVQTRDWAGAARRNVRSIEELRAEKAALKQAV"
misc_feature complement(331866..333191)
/locus_tag="Rleg_6878"
/note="alpha-galactosidase; Provisional; Region: PRK15076"
/db_xref="CDD:185035"
misc_feature complement(331899..333188)
/locus_tag="Rleg_6878"
/note="Glycoside Hydrolases Family 4; Alpha-glucosidases
and alpha-galactosidases; Region:
GH4_alpha_glucosidase_galactosidase; cd05297"
/db_xref="CDD:133433"
misc_feature complement(order(332688..332690,332748..332750,
332754..332756,332817..332819,332856..332858,
332928..332933,332940..332948,333066..333068,
333078..333083,333159..333164))
/locus_tag="Rleg_6878"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:133433"
misc_feature complement(order(332433..332435,332442..332444,
332592..332594,332685..332687,332748..332750,
332856..332858))
/locus_tag="Rleg_6878"
/note="sugar binding site [chemical binding]; other site"
/db_xref="CDD:133433"
misc_feature complement(order(332592..332594,332685..332687))
/locus_tag="Rleg_6878"
/note="divalent metal binding site [ion binding]; other
site"
/db_xref="CDD:133433"
misc_feature complement(order(332082..332093,332097..332099,
332103..332108,332163..332165,332199..332201,
332559..332561,332568..332570,332616..332618,
332625..332627))
/locus_tag="Rleg_6878"
/note="putative tetramer (dimer of dimers) interface
[polypeptide binding]; other site"
/db_xref="CDD:133433"
misc_feature complement(order(331929..331931,331935..331937,
331941..331943,331947..331949,331962..331967,
331974..331979,331986..331988,331992..331994,
332010..332012,332022..332024,332031..332033,
332043..332045,332052..332054,332064..332069,
332427..332429,332463..332465))
/locus_tag="Rleg_6878"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133433"
gene 333405..334280
/locus_tag="Rleg_6879"
/db_xref="GeneID:8022462"
CDS 333405..334280
/locus_tag="Rleg_6879"
/inference="protein motif:PFAM:PF02311"
/note="PFAM: AraC protein arabinose-binding/dimerisation;
helix-turn-helix- domain containing protein AraC type;
SMART: helix-turn-helix- domain containing protein AraC
type;
KEGG: rec:RHECIAT_PA0000095 probable transcriptional
regulator protein, AraC family"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_002984875.1"
/db_xref="GI:241666791"
/db_xref="InterPro:IPR000005"
/db_xref="InterPro:IPR003313"
/db_xref="GeneID:8022462"
/translation="MLQDLIANGQSMRTVSLPRGRQRLHAMPTSAGYEVRENESYDWD
GRRRGQTPFTVLQHTISGSGQLRYQHRNYRLQGGDTLLVLVPHNHRYWLEKGDRWEYF
WISMNGEETLRIHQMVLSTAGPVLKLQPSTIDHLADCSLRLVKGATSPGAASAIAYEA
AMALYDDVFGSPAFAAELSLMQPVIDHINTNLEKPLPVSELAGIVGLSRAHFSRSFAE
SEGMPPAEFVLQQRLQRAVKLLTKADFLPVKEVAIMCGFEDPNYFSKVFRRVYGTNPT
EFRTTGMYASIGKLR"
misc_feature 333486..333833
/locus_tag="Rleg_6879"
/note="AraC-like ligand binding domain; Region:
AraC_binding; pfam02311"
/db_xref="CDD:145456"
misc_feature 333987..334241
/locus_tag="Rleg_6879"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
misc_feature 334140..334244
/locus_tag="Rleg_6879"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene complement(334310..335371)
/locus_tag="Rleg_6880"
/db_xref="GeneID:8022463"
CDS complement(334310..335371)
/locus_tag="Rleg_6880"
/inference="protein motif:PFAM:PF08242"
/note="PFAM: Methyltransferase type 12; Methyltransferase
type 11; O-methyltransferase family 2;
KEGG: methyltransferase protein"
/codon_start=1
/transl_table=11
/product="Methyltransferase type 12"
/protein_id="YP_002984876.1"
/db_xref="GI:241666792"
/db_xref="InterPro:IPR001077"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:8022463"
/translation="MREPDMQKLDALVGRLVGDVGAAMSGALVVLGDQVGIYKAMADG
TPMSVQDLAKKTGIKERYLREWLSAQAAADYVAYDEKTDRFSLTPEQAMVFGEENSPA
FFVGAFEVVQSMWMDEPKVADAFRTGKGLGWHEHSTCLFRGTERFFRPGYNSHLVNEW
IPALGGVEERLKAGASVADVGCGHGASTILMAQAYPASRFTGFDYHGPSIERANAAAK
EAGVSDRVSFEQGSAAEFPGRGYDMVAMFDCLHDMGDPVGAGRHVKDTLGPNGTWLIV
EPFAHDHLKDNLNPVGRVYYGASTMICTPASLSQEVGLGLGAQAGEMKLRKVALDAGF
THFRRATETPFNMVFEVRA"
misc_feature complement(334457..334861)
/locus_tag="Rleg_6880"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:206018"
misc_feature complement(334541..334843)
/locus_tag="Rleg_6880"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(334631..334633,334673..334681,
334757..334762,334814..334834))
/locus_tag="Rleg_6880"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 335959..336279
/locus_tag="Rleg_6881"
/db_xref="GeneID:8022464"
CDS 335959..336279
/locus_tag="Rleg_6881"
/inference="similar to AA sequence:KEGG:RHE_PE00087"
/note="KEGG: ret:RHE_PE00087 hypothetical protein"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_002984877.1"
/db_xref="GI:241666793"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:8022464"
/translation="MCLSSAQCRAARALLAWSQDELSSASKVAKATIANFEAGKRSPY
ERTLQDMKHALEGAGVIFIPENGGGAGVRLAKRADASIDTNETETVQYEEYLENDAPP
GAGG"
misc_feature 335983..>336249
/locus_tag="Rleg_6881"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:31586"
misc_feature 335983..336126
/locus_tag="Rleg_6881"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(335983..335985,335995..335997,336070..336072)
/locus_tag="Rleg_6881"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(335992..335994,336067..336069)
/locus_tag="Rleg_6881"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(336013..336018,336049..336051,336058..336060,
336070..336075)
/locus_tag="Rleg_6881"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene 336283..336543
/locus_tag="Rleg_6882"
/db_xref="GeneID:8022465"
CDS 336283..336543
/locus_tag="Rleg_6882"
/inference="similar to AA sequence:KEGG:RHECIAT_PA0000093"
/note="KEGG: rec:RHECIAT_PA0000093 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984878.1"
/db_xref="GI:241666794"
/db_xref="GeneID:8022465"
/translation="MAKKEKLEHSELAGEFTDDGITVLVDIFRTSGSNEDWSMEVVTQ
AEDLIRWDEPFPTDRDAFDEFLAVVARDGIRSFLEDEEPSVH"
gene 336554..336793
/locus_tag="Rleg_6883"
/db_xref="GeneID:8022466"
CDS 336554..336793
/locus_tag="Rleg_6883"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: rec:RHECIAT_PA0000092 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984879.1"
/db_xref="GI:241666795"
/db_xref="GeneID:8022466"
/translation="MKSINDLVASAKTVCDRYRAGRMERETVREWVLGLGAYPSPHGD
RVREAAEWFRLHNREPVSEDIVLVDIDRLAAISAP"
gene 336909..337061
/locus_tag="Rleg_6884"
/pseudo
/db_xref="GeneID:8022467"
gene 337165..339726
/locus_tag="Rleg_6885"
/db_xref="GeneID:8022468"
CDS 337165..339726
/locus_tag="Rleg_6885"
/inference="protein motif:PFAM:PF01266"
/note="PFAM: FAD dependent oxidoreductase; glycine
cleavage T protein (aminomethyl transferase);
KEGG: ret:RHE_PE00084 putative sarcosine dehydrogenase
protein"
/codon_start=1
/transl_table=11
/product="FAD dependent oxidoreductase"
/protein_id="YP_002984880.1"
/db_xref="GI:241666796"
/db_xref="InterPro:IPR002345"
/db_xref="InterPro:IPR006076"
/db_xref="InterPro:IPR006222"
/db_xref="GeneID:8022468"
/translation="MAAFPEKAKVVIIGLGGIVGASIAHHLVERGWDDIVGIDKSGIP
TDIGSTAHASDFCYTTSHDYLSVWTTQYSIDFYEKMGHYARIGGLEVARTGDDAWMEE
IKRKLSSARAFGTRAHYVSPSEIKEKFPLIEEDQVMGGLYDPDAGLVIPRSQTVAGKL
VDAAEKAGKLKVFGNTPAKSLIVEGGRIKGVVTHRGTIMADHVIVCAGLWGRLIAEMV
GEDLPVMPVDHPLTFFGPYNEFEGTGKEIGFPLLRDQGNSAYMRDTGDPATTEGGQIE
WGYYEATNPRMCHPRDILEKHEARLSPSQRDLEMEQIIEPLERAMELTPILGELGYNE
GHSFNGLLQVSAGGGASCGESQKVRGLWYCVAIWVKDGPGYGKLIADWMTDGRTEIDH
NSIDYARFYPHQLTEEFIEGRCYEAAQKIYFPAVHTREPYASGRNAKRSPFYEREKEL
GGYFMELGGWERAHGYAANEHLLEKYADRVPVRENEWDSRHFWRVSNAEHLAMSDDCG
IVNLSHFHMVDIEGPDHVELMEWLCAAKIGGDGNIGKGIYTHFLDDEGMVRADFTVFR
MADRCRLVNGADAGPRDLHYMKRVAEDRGLDVIITDVSEKFVTIGIWGPNARDTLKKT
VADPAGLDQENFAFAAIKPIEIAGKPVTAFRISYVGEQGWELHMKYEDGLAVWDALRA
TGVMAFGVETYANSRRMEKSLRLQNGDLLTQYNLIEADLARPKVKEADFRGKAKHLEY
KTREHQPAMLCTLVMTENTDKSGVKRYPVGNMPVVDPATGEVLVDELGRRSYTTSVAY
GPTVGKNIALAYLPWSHCQVGRRLNVEYFAETYPVEVVGVGYKPIYDPENLKPRT"
misc_feature 337225..338379
/locus_tag="Rleg_6885"
/note="Glycine/D-amino acid oxidases (deaminating) [Amino
acid transport and metabolism]; Region: DadA; COG0665"
/db_xref="CDD:31009"
misc_feature 338464..339720
/locus_tag="Rleg_6885"
/note="Glycine cleavage system T protein
(aminomethyltransferase) [Amino acid transport and
metabolism]; Region: GcvT; COG0404"
/db_xref="CDD:30753"
misc_feature 339352..339672
/locus_tag="Rleg_6885"
/note="Glycine cleavage T-protein C-terminal barrel
domain; Region: GCV_T_C; pfam08669"
/db_xref="CDD:204020"
gene complement(339938..340078)
/locus_tag="Rleg_6886"
/db_xref="GeneID:8022469"
CDS complement(339938..340078)
/locus_tag="Rleg_6886"
/inference="similar to AA sequence:KEGG:AGR_C_1484"
/note="KEGG: atc:AGR_C_1484 hypothetical protein"
/codon_start=1
/transl_table=11
/product="putative transcriptional regulator,
CopG/Arc/MetJ family"
/protein_id="YP_002984881.1"
/db_xref="GI:241666797"
/db_xref="GeneID:8022469"
/translation="MEVNYPNVEKISVSMTPHHAELLRDAVAGGASQVIREAMRDWSA
KW"
misc_feature complement(<339941..340054)
/locus_tag="Rleg_6886"
/note="Ribbon-helix-helix protein, copG family; Region:
RHH_1; cl15783"
/db_xref="CDD:210183"
gene complement(340150..340482)
/locus_tag="Rleg_6887"
/db_xref="GeneID:8022470"
CDS complement(340150..340482)
/locus_tag="Rleg_6887"
/inference="similar to AA sequence:KEGG:RHE_CH02020"
/note="KEGG: ret:RHE_CH02020 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984882.1"
/db_xref="GI:241666798"
/db_xref="GeneID:8022470"
/translation="MPTHRSFSPRYTTKKRARPRFTMEAFYLAIIGAGVAGYLGVEAA
ANGASFANRGVGCTIKGNVSIGSHERIYHLPGQEYYEKTNISPRYGERWFCSEAEARA
AGWRRARR"
sig_peptide complement(340351..340482)
/locus_tag="Rleg_6887"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.896) with cleavage site probability 0.683 at
residue 44;
SNP /replace=A"
gene 340844..342364
/locus_tag="Rleg_6888"
/db_xref="GeneID:8022471"
CDS 340844..342364
/locus_tag="Rleg_6888"
/inference="protein motif:PFAM:PF00924"
/note="PFAM: MscS Mechanosensitive ion channel; cyclic
nucleotide-binding;
SMART: cyclic nucleotide-binding;
KEGG: mechanosensitive ion channel protein"
/codon_start=1
/transl_table=11
/product="cyclic nucleotide-regulated small
mechanosensitive ion channel"
/protein_id="YP_002984883.1"
/db_xref="GI:241666799"
/db_xref="InterPro:IPR000595"
/db_xref="InterPro:IPR006685"
/db_xref="GeneID:8022471"
/translation="MLETLTWSGVLADPVVQAGTLAVVGAIVTRIALRPFPSWRLAGQ
VFFFAALTVLLLYHDIVPYQVGPTTASTFERVFIALAKVVWWINAAWALIAFVRVFLI
FERQPREGRLVQDLVIGLIYLGAILSVVAYVFSFPVGTLIATSGVLAVILGLAMQSTL
SDVFSGIALNLGRPYAIGDWIVLNDGVEGRVVETNWRSTHLLNGSNDLVVLPNSFLAK
VGLTNLSSPDRSHGATLTVRVVPTIGPSAIIDVMRAVLLSSDLILTEPKPGVQIKSLT
SDAIEVELSFRVRDIGQAGPAKNEIFDLIYRHVKAAGLTLARPLDAAGPPPEQLQPEE
LAKPHRPTPLKLLDAIPLFSSLTEDEKETLAASMTRRTYKKDAILIEQGDTVASLMIV
RSGALVATRREGHKEIELGRLAPGDYFGESGLLIGVGEAASLRALTFVVVYEIAQASL
TPLLHDRPGIAEELAATLSRRIETGQHSFAADGATLNGGSMTSLVTRIRHLFQVPQ"
misc_feature 341030..341800
/locus_tag="Rleg_6888"
/note="Small-conductance mechanosensitive channel [Cell
envelope biogenesis, outer membrane]; Region: MscS;
COG0668"
/db_xref="CDD:31012"
misc_feature 341189..341785
/locus_tag="Rleg_6888"
/note="Mechanosensitive ion channel; Region: MS_channel;
pfam00924"
/db_xref="CDD:201506"
misc_feature 341879..>342259
/locus_tag="Rleg_6888"
/note="cAMP-binding proteins - catabolite gene activator
and regulatory subunit of cAMP-dependent protein kinases
[Signal transduction mechanisms]; Region: Crp; COG0664"
/db_xref="CDD:31008"
misc_feature 341897..342238
/locus_tag="Rleg_6888"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
cd00038"
/db_xref="CDD:28920"
misc_feature order(342101..342106,342131..342139)
/locus_tag="Rleg_6888"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:28920"
misc_feature order(342197..342205,342215..342223)
/locus_tag="Rleg_6888"
/note="flexible hinge region; other site"
/db_xref="CDD:28920"
gene 342716..343093
/locus_tag="Rleg_6889"
/db_xref="GeneID:8022472"
CDS 342716..343093
/locus_tag="Rleg_6889"
/inference="similar to AA sequence:KEGG:Rru_A1975"
/note="KEGG: rru:Rru_A1975 XRE family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_002984884.1"
/db_xref="GI:241666800"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:8022472"
/translation="MGSPKSKPALQRLGHDVRGARLRRSMAVVDLAVRAGTSPSTVAR
LEKGDPGVGIGTLADVLVVLGLVDRLADLVDIRKDDLGLALTAERQPRRGRSFATTLR
RQRAKGKTAQEDPDVVDPDGASF"
misc_feature 342755..>342862
/locus_tag="Rleg_6889"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cl15761"
/db_xref="CDD:210161"
misc_feature order(342767..342769,342779..342781,342854..342856)
/locus_tag="Rleg_6889"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(342776..342778,342851..342853)
/locus_tag="Rleg_6889"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(342797..342802,342833..342835,342842..342844,
342854..342859)
/locus_tag="Rleg_6889"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene complement(343692..343916)
/locus_tag="Rleg_6890"
/db_xref="GeneID:8022473"
CDS complement(343692..343916)
/locus_tag="Rleg_6890"
/inference="similar to AA sequence:KEGG:msl4971"
/note="KEGG: mlo:msl4971 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984885.1"
/db_xref="GI:241666801"
/db_xref="GeneID:8022473"
/translation="MMNILKVVFREFFGMFIDDGALALLALLLIAAVGVLVKFAHVDA
LLGATLLLVGCLMVLAESVARAARKRFQRK"
gene complement(343913..344665)
/locus_tag="Rleg_6891"
/db_xref="GeneID:8022474"
CDS complement(343913..344665)
/locus_tag="Rleg_6891"
/inference="similar to AA sequence:KEGG:Arad_3384"
/note="KEGG: mntH; manganese transporter protein"
/codon_start=1
/transl_table=11
/product="mntH; manganese transporter protein"
/protein_id="YP_002984886.1"
/db_xref="GI:241666802"
/db_xref="GeneID:8022474"
/translation="MTTLTTITSTVTAAFLGSFVEVVEAFTIILAVGVTQSWRPALIG
TGLALALLALLVLTLGPLLGLIPIELMQFVIGTLLVLFGLRWLRKAILRASGFIALHD
EDKAFAAETDSLRRQSAERRANFLAGIAAFKAVLLEGIEVVFIVIATGAGHGMIGYAS
LGAAAACLLVLIIGVFVHKPLSAVPENSLKFVVGLLLSAFGIFWVGEGVGADWPGADL
SLLAILAVLAVFSFAAVRMLRRYSNTHAEVAA"
sig_peptide complement(344588..344665)
/locus_tag="Rleg_6891"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.816) with cleavage site probability 0.531 at
residue 26"
misc_feature complement(344015..344629)
/locus_tag="Rleg_6891"
/note="Predicted membrane protein [Function unknown];
Region: COG4280"
/db_xref="CDD:34002"
gene complement(344723..345478)
/locus_tag="Rleg_6892"
/db_xref="GeneID:8022475"
CDS complement(344723..345478)
/locus_tag="Rleg_6892"
/inference="protein motif:PFAM:PF01569"
/note="PFAM: phosphoesterase PA-phosphatase related;
SMART: phosphoesterase PA-phosphatase related;
KEGG: ret:RHE_PE00083 hypothetical protein"
/codon_start=1
/transl_table=11
/product="phosphoesterase PA-phosphatase related"
/protein_id="YP_002984887.1"
/db_xref="GI:241666803"
/db_xref="InterPro:IPR000326"
/db_xref="GeneID:8022475"
/translation="MMQWELDGGMTEVQRRGFLTRLTAYEPLTLIMLASIAGGLFVLQ
RLTSEVLEGETFRFDDAILLALRRPGELAVPIGPGWLTHAIGDITSLGGITVLSLMTV
LVTVYLLLDRRWPIAIFVFSSVLTGWLASTLLKILVARPRPDIVPHLVEVSDLSFPSG
HAMVSAVTYLTLGALLARTQRYRSTRIFVMGVGVFLAVIIGLSRIYLGVHYPTDVLAG
WCAGALWALGCWLISKRFVPSRAPDDVGEAGKR"
misc_feature complement(344834..345331)
/locus_tag="Rleg_6892"
/note="PAP2_like_2 proteins. PAP2 is a super-family of
phosphatases and haloperoxidases. This subgroup, which is
specific to bacteria, lacks functional characterization
and may act as a membrane-associated lipid phosphatase;
Region: PAP2_like_2; cd03392"
/db_xref="CDD:48096"
misc_feature complement(344834..>345145)
/locus_tag="Rleg_6892"
/note="Membrane-associated phospholipid phosphatase [Lipid
metabolism]; Region: PgpB; COG0671"
/db_xref="CDD:31015"
misc_feature complement(order(344837..344839,344849..344851,
344867..344869,344996..345004,345053..345055,
345074..345076))
/locus_tag="Rleg_6892"
/note="active site"
/db_xref="CDD:48096"
gene complement(345684..346001)
/locus_tag="Rleg_6893"
/db_xref="GeneID:8022639"
CDS complement(345684..346001)
/locus_tag="Rleg_6893"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984888.1"
/db_xref="GI:241666804"
/db_xref="GeneID:8022639"
/translation="MSSQTPVGVVKNYGTAVGLTRGPEEVCVYDKTAHKPLKSLMCSG
DRPATMFGADQQTIAHFASTCALIAKGLMMETFCLFQTADSHQTGIVISSEGGDTSMG
VPG"
gene 346026..346751
/locus_tag="Rleg_6894"
/db_xref="GeneID:8022640"
CDS 346026..346751
/locus_tag="Rleg_6894"
/inference="similar to AA sequence:KEGG:RHECIAT_PC0000054"
/note="KEGG: rec:RHECIAT_PC0000054 hypothetical protein"
/codon_start=1
/transl_table=11
/product="putative transcriptional regulator, Crp/Fnr
family"
/protein_id="YP_002984889.1"
/db_xref="GI:241666805"
/db_xref="GeneID:8022640"
/translation="MPHFDQSTVGNTLLKKLSADRFARLSGAMERIDLPLRHALVASD
VPTTHVCFLERGLASMVVSSIDEEVVEIGHIGREGASGMHVVLAVETTPTRTFMQVAG
SGIMVPMETFQRALADDPEMKDFFLRYVHTTVLQLAHSALANARYNMHERLARWILMC
HDRLEGNDLAITHEFLALMLGVRRSGVTNELHVLEGVHAIRSTRGNVRILDREKLIEI
AGGCYGVPEREYERLLGLPLRPR"
misc_feature 346056..346664
/locus_tag="Rleg_6894"
/note="cAMP-binding proteins - catabolite gene activator
and regulatory subunit of cAMP-dependent protein kinases
[Signal transduction mechanisms]; Region: Crp; COG0664"
/db_xref="CDD:31008"
misc_feature 346476..346679
/locus_tag="Rleg_6894"
/note="Crp-like helix-turn-helix domain; Region:
HTH_Crp_2; pfam13545"
/db_xref="CDD:205723"
gene complement(346754..346993)
/locus_tag="Rleg_6895"
/db_xref="GeneID:8022641"
CDS complement(346754..346993)
/locus_tag="Rleg_6895"
/inference="similar to AA sequence:KEGG:RHECIAT_PC0000053"
/note="KEGG: rec:RHECIAT_PC0000053 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984890.1"
/db_xref="GI:241666806"
/db_xref="GeneID:8022641"
/translation="MPRFYFNILSEAGSLDDWEGTELADLDAARVEAVRDARALMSSA
VLLGYDISSRSVEIRNETGDILLVLPFAEAVKPMG"
gene 347214..347462
/locus_tag="Rleg_6896"
/db_xref="GeneID:8022642"
CDS 347214..347462
/locus_tag="Rleg_6896"
/inference="similar to AA sequence:KEGG:RHECIAT_PB0000068"
/note="KEGG: rec:RHECIAT_PB0000068 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984891.1"
/db_xref="GI:241666807"
/db_xref="GeneID:8022642"
/translation="MIDLNLSLQTKDVNVLTEAVRTWYRHNRVTPTERATELLCSAAV
DLFSQGHRTPEELVTLLIMKFDSPLSLKINAATSTAHH"
gene 347528..347782
/locus_tag="Rleg_6897"
/db_xref="GeneID:8022643"
CDS 347528..347782
/locus_tag="Rleg_6897"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: rec:RHECIAT_CH0002698 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984892.1"
/db_xref="GI:241666808"
/db_xref="GeneID:8022643"
/translation="MLQSLITLSDQDIDIVITAVRRWCTKNHCEIDSNEGRRALTLAI
DLVQHSARDTLLQNLIERLGPHPPSGIDAESSGAHSWRSS"
gene complement(347957..348862)
/locus_tag="Rleg_6898"
/db_xref="GeneID:8022644"
CDS complement(347957..348862)
/locus_tag="Rleg_6898"
/inference="protein motif:PFAM:PF03781"
/note="PFAM: protein of unknown function DUF323;
KEGG: mlo:mll5466 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984893.1"
/db_xref="GI:241666809"
/db_xref="InterPro:IPR005532"
/db_xref="GeneID:8022644"
/translation="MSWIPGGDFLMGSDRHYAEEAPAHRVRVDGFWMDTCPVTNWAFS
AFVEATGYVTTAERPANPADYPGAIMEMLAPASVVFIKPKSPVDLTNHYNWWKYVRGA
NWRHPRGPASTIKGLLEHPVVHVAFEDAKAYAAWAGKELPTEAEWEFAARGGLEAADY
VWGGEMLPGGRHMANTWQGEFPLQNSREDGFEGTSPVGSFPANGYGLFDMAGNVWEWT
TDWYQEHGMIDSPCCTISNPVGAELSNSHDPRQPQISIPRKVMKGGSHLCAPNYCRRY
RPAARMAQPVDTATCHLGFRCIARG"
misc_feature complement(347963..348862)
/locus_tag="Rleg_6898"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1262"
/db_xref="CDD:31454"
misc_feature complement(347966..348862)
/locus_tag="Rleg_6898"
/note="Formylglycine-generating sulfatase enzyme; Region:
FGE-sulfatase; pfam03781"
/db_xref="CDD:190747"
gene complement(349029..349553)
/locus_tag="Rleg_6899"
/db_xref="GeneID:8022645"
CDS complement(349029..349553)
/locus_tag="Rleg_6899"
/inference="similar to AA sequence:KEGG:SMa0945"
/note="KEGG: sme:SMa0945 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984894.1"
/db_xref="GI:241666810"
/db_xref="GeneID:8022645"
/translation="MIANENRQTTTILQRARHEIKEYAFLCAYLYVCFAAILLYKMAV
LGGQGVEFLVFGIPALKALILGKFILLGHTIRLGERSGGSRLVGVVAYKAALYLSLIL
VMSLAEECVVGFLHGRTLSVVITGMAGRLPELLAMSAIMLLILIPYLASRELGVALGK
GRLWGLFFEHREVR"
gene complement(349610..351247)
/locus_tag="Rleg_6900"
/db_xref="GeneID:8022646"
CDS complement(349610..351247)
/locus_tag="Rleg_6900"
/inference="protein motif:PFAM:PF00884"
/note="PFAM: sulfatase;
KEGG: sme:SMa0943 arylsulfatase"
/codon_start=1
/transl_table=11
/product="sulfatase"
/protein_id="YP_002984895.1"
/db_xref="GI:241666811"
/db_xref="InterPro:IPR000917"
/db_xref="GeneID:8022646"
/translation="MSSKSNRQGYNATRRQILLAGGSAIALTAFCPIASIPALAQAGA
KKPNILVIFGDDIGWWNTSAYNRGQMGYQTPNIDRIADEGAMFTDLYAQQSCTAGRAA
FITGQSCFRTGLLKVGLPGAKEGLSEKDPTIAELLKPQGYVTGQFGKNHLGDRNEFLP
TVHGFDEFFGNLYHLNAEEEPENPDYPKDPQFLAKFGPRGVLKCKASETDDPTEDPRF
GRVGKQTIEDTGPLNRKRMETVDEEFLGAAKDFIDRSAKADKPFFCWFNSTRMHIYTH
LKAESEGKTGLGIVADGMAEFDGMVGQLLDQLDDLGIAENTIVVWTTDNGAEVFSWPD
GGTTPFHGEKNTNWEGGYRVPGMVRWPGVVKPGTEINEIVSHEDWLPTLVAAAGEPDI
AAKLLNGYEAAGKTFNVHLDGYNQRKLLDGTGPGARKEYFYWTDDGSLAGLRYDRWKL
VFMEQRAEGLDVWQDPLITLRFPKLIDLRADPFEIAQHAAGDYARWRVEHAFALVPAQ
AYVAKHLQTYVKYPPRQAPGSFSMDHVLEKLQRGGGQ"
sig_peptide complement(351125..351247)
/locus_tag="Rleg_6900"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.874 at
residue 41"
misc_feature complement(349787..351118)
/locus_tag="Rleg_6900"
/note="Arylsulfatase A and related enzymes [Inorganic ion
transport and metabolism]; Region: AslA; COG3119"
/db_xref="CDD:32933"
misc_feature complement(350084..351109)
/locus_tag="Rleg_6900"
/note="Sulfatase; Region: Sulfatase; pfam00884"
/db_xref="CDD:201490"
misc_feature complement(349796..>350368)
/locus_tag="Rleg_6900"
/note="Sulfatase; Region: Sulfatase; cl10460"
/db_xref="CDD:213119"
gene complement(351611..351982)
/locus_tag="Rleg_6901"
/db_xref="GeneID:8022647"
CDS complement(351611..351982)
/locus_tag="Rleg_6901"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver;
SMART: response regulator receiver;
KEGG: smd:Smed_5632 response regulator receiver protein"
/codon_start=1
/transl_table=11
/product="response regulator receiver protein"
/protein_id="YP_002984896.1"
/db_xref="GI:241666812"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:8022647"
/translation="MENLRRTVAVVDDDASLRRSLGRLLNAYGFLAMEFASAEAFLAR
DPKAAIDCLVLDIDLGGMSGIDLQRRLKADGTTLPVIFITAVETASVKAEAEKVGCVA
YLQKQFSGAALIAAINKALGL"
misc_feature complement(351629..351961)
/locus_tag="Rleg_6901"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(351620..351955)
/locus_tag="Rleg_6901"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(351662..351667,351674..351676,
351731..351733,351791..351793,351815..351817,
351944..351949))
/locus_tag="Rleg_6901"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(351815..351817)
/locus_tag="Rleg_6901"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(351791..351799,351803..351808))
/locus_tag="Rleg_6901"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(351659..351667)
/locus_tag="Rleg_6901"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(352084..352716)
/locus_tag="Rleg_6902"
/db_xref="GeneID:8022648"
CDS complement(352084..352716)
/locus_tag="Rleg_6902"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; regulatory
protein LuxR; Sigma-70 region 4 type 2;
SMART: response regulator receiver; regulatory protein
LuxR;
KEGG: sme:SMa1686 two-component response regulator"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_002984897.1"
/db_xref="GI:241666813"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR013249"
/db_xref="GeneID:8022648"
/translation="MKPVVHIVDDDKSYRTATARLLSANGLRVEAYESGDQFLSRLSA
CEPGCVLLDLQMPGQSGLQIQRRLCELAPLFPVVFLTGEGDIKASVEAMKAGAKDFLE
KSSTAATLMGAIDRALIQYERQRAEHDRLQGQRSLVAGLSPREAEVFRFLIRGRLNKQ
IAHALGISERTVKVHRHQVMEKLGVRSLAEAVSIAANIGLIDQDTASSAG"
misc_feature complement(352117..352716)
/locus_tag="Rleg_6902"
/note="Response regulator [Signal transduction
mechanisms]; Region: TtrR; COG4566"
/db_xref="CDD:34204"
misc_feature complement(352363..352698)
/locus_tag="Rleg_6902"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(352405..352410,352417..352419,
352474..352476,352534..352536,352558..352560,
352687..352692))
/locus_tag="Rleg_6902"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(352558..352560)
/locus_tag="Rleg_6902"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(352534..352542,352546..352551))
/locus_tag="Rleg_6902"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(352402..352410)
/locus_tag="Rleg_6902"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(352126..352296)
/locus_tag="Rleg_6902"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(352153..352155,352186..352200,
352204..352209,352213..352218,352240..352248,
352285..352293))
/locus_tag="Rleg_6902"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(352126..352131,352138..352140,
352147..352155,352246..352248,352252..352254,
352258..352260))
/locus_tag="Rleg_6902"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(352713..354608)
/locus_tag="Rleg_6903"
/db_xref="GeneID:8022649"
CDS complement(352713..354608)
/locus_tag="Rleg_6903"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
histidine kinase A domain protein;
SMART: ATP-binding region ATPase domain protein; histidine
kinase A domain protein;
KEGG: sme:SMa1684 sensory histidine kinase"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_002984898.1"
/db_xref="GI:241666814"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:8022649"
/translation="MGLGEWSGRLCCAAFLLAVVAMSVPSRQAAASDTSIAIIDRVPR
VLVLYPYDERIAATTAAGEALRTRLLEATNGKIDLFSEFLDLSRFPEGDHVARMARYL
GEKYAARRPDVVVALGRESTSFFVANRGTIAPGAKIVAAGFGTATAEKIDLPDDVIGA
FSTFDILKTAEMARGLQPDARHLYVVGGSSDFDRSWLTTARVDLKQFSKSYDTTTYLE
DLTIDELVERASRVPPDSIILALTVFKDRAGRNFIPRDAIRQIASTASAPVYGPYQTY
IDHGVVGGNTVTFEALGRTVGDLVIDAIAGKPVSDLEAPQTYVADARQLKRWGLAEKD
LPPGTIQMHKERSLWEEHWIVLVAGGGLVLAQASIISVLLLERRRRRDAERSSQLHLL
EAVHLNQSATAGALSSSIAHELNQPLSAIRNNAEAASVLLRSANPDHGLIQQILLDIQ
EDDQRAGDIISRMRGLLKKRSEIDWQEFDLNDVTSSAIHIIHGEAERRGITLTSTQPP
GELPVRADKVHVQQVILNLATNAMDAMLDAVPAGRTLTFATGLANEKAELRVSDTGDG
IPEERLIRIFEPFYTTKQAGTGLGLSIARAILETYGGTIRADNRPEGGAVFRVALPLA
HREEQSR"
sig_peptide complement(354513..354608)
/locus_tag="Rleg_6903"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.657 at
residue 32;
SNP /replace=T"
misc_feature complement(352737..353714)
/locus_tag="Rleg_6903"
/note="Signal transduction histidine kinase, nitrogen
specific [Signal transduction mechanisms]; Region: NtrB;
COG3852"
/db_xref="CDD:33642"
misc_feature complement(353205..353399)
/locus_tag="Rleg_6903"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cl00080"
/db_xref="CDD:206823"
misc_feature complement(order(353220..353222,353232..353234,
353241..353243,353253..353255,353262..353264,
353274..353276,353337..353339,353346..353348,
353358..353360,353367..353369,353379..353381,
353391..353393))
/locus_tag="Rleg_6903"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(353373..353375)
/locus_tag="Rleg_6903"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(352746..353051)
/locus_tag="Rleg_6903"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(352758..352760,352764..352769,
352782..352784,352788..352790,352836..352847,
352908..352913,352917..352919,352923..352925,
352929..352931,353010..353012,353019..353021,
353031..353033))
/locus_tag="Rleg_6903"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(353019..353021)
/locus_tag="Rleg_6903"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(352839..352841,352845..352847,
352911..352913,352917..352919))
/locus_tag="Rleg_6903"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 354900..356570
/locus_tag="Rleg_6904"
/db_xref="GeneID:8022650"
CDS 354900..356570
/locus_tag="Rleg_6904"
/inference="protein motif:PFAM:PF00884"
/note="PFAM: sulfatase;
KEGG: smd:Smed_5768 sulfatase"
/codon_start=1
/transl_table=11
/product="sulfatase"
/protein_id="YP_002984899.1"
/db_xref="GI:241666815"
/db_xref="InterPro:IPR000917"
/db_xref="GeneID:8022650"
/translation="MNSRILIRCIGALASSTILWCAASPLQAQDSQRKPNILFIVSDD
TGYGDLGPYGGGEGRGMPTPNIDKLAEDGMTFFSFYAQPSCTPGRAAMQTGRIPNRSG
MTTVAFQGQGGGLPAAEWTLASVLKRGGYHTYFTGKWHLGEADYALPTAQGYDEMRYA
GLYHLNAYTYADPTWFPDMDPKLREMFQKVTKGALSAKAGGPVTEEFKVNGQYVDTPM
IDGKEGVVGIPFFDGYVEKAALGFLDEAAKAPDEPFFINVNFMKVHQPNMPAPEFEHK
SMSKSKYADSIVELDTRIGRIMDKLRETGMDRNTLVFYTTDNGAWQDVYPDAGYTPFR
GTKGTLREGGNRVPAIAVWPGKIKPRTKNHDIVGGLDLMATFAAVGAVPLPDKDREDK
PIIFDSYDMSPILLGTGKSERKSWFYFTENELSPGAIRVNNYKFAFNIRGDNGASTGG
LAVDTNLGWKGEEKYVATVPQVFDLWQDPQERYDIFMNNFTERTWMGVVMGEELKKIM
ATYVEYPPRKPQSLTYNGPITLSDYSRFQWIRESLAKEGVSIPMPTGN"
sig_peptide 354900..354986
/locus_tag="Rleg_6904"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 1.000 at
residue 29"
misc_feature 354990..356369
/locus_tag="Rleg_6904"
/note="Arylsulfatase A and related enzymes [Inorganic ion
transport and metabolism]; Region: AslA; COG3119"
/db_xref="CDD:32933"
misc_feature 355002..356081
/locus_tag="Rleg_6904"
/note="Sulfatase; Region: Sulfatase; pfam00884"
/db_xref="CDD:201490"
gene 356655..357665
/locus_tag="Rleg_6905"
/db_xref="GeneID:8022651"
CDS 356655..357665
/locus_tag="Rleg_6905"
/inference="protein motif:PFAM:PF00702"
/note="PFAM: haloacid dehalogenase;
KEGG: smd:Smed_1238 NapD-like protein"
/codon_start=1
/transl_table=11
/product="haloacid dehalogenase"
/protein_id="YP_002984900.1"
/db_xref="GI:241666816"
/db_xref="InterPro:IPR005834"
/db_xref="GeneID:8022651"
/translation="MISARNFRYFSRGVALAAAVWLFAAAAAVAQTDALPSWNDTAPK
QAIISFVEKVTKPGSAEFVPEAARIAVFDNDGTLWVEHPMYTQLAFALDRVKGLAPQH
PEWKQTQPFKAVLEGDMKTLAASGEKGLVELIMATHAGMTSDDFQKVVTDWLASARDP
KFKRPYTELVYQPMVELLAYLRANGFKTFIVSGGGIEFMRPWVEKVYGVPPEQVIGSS
IKTEFRMQDDTPTLFRLPEVNFIDDKAGKPVGINQQIGRRPIAAFGNSDGDLQMLQWT
TMAGAPARLGVLIHHTDAKREYAYDRDTEFGRLDKALDAAAITGWTVVDMKADWKQVF
KD"
sig_peptide 356655..356747
/locus_tag="Rleg_6905"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.917 at
residue 31"
misc_feature 356856..>357236
/locus_tag="Rleg_6905"
/note="haloacid dehalogenase-like hydrolase; Region:
Hydrolase; pfam00702"
/db_xref="CDD:201404"
misc_feature 357129..357497
/locus_tag="Rleg_6905"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature 357228..357230
/locus_tag="Rleg_6905"
/note="motif II; other site"
/db_xref="CDD:119389"
gene 357736..360012
/locus_tag="Rleg_6906"
/db_xref="GeneID:8022652"
CDS 357736..360012
/locus_tag="Rleg_6906"
/inference="protein motif:TFAM:TIGR01905"
/note="KEGG: smd:Smed_5770 tetratricopeptide TPR_2 repeat
protein;
TIGRFAM: cytochrome C family protein;
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR
repeat-containing protein;
SMART: Tetratricopeptide domain protein"
/codon_start=1
/transl_table=11
/product="cytochrome C family protein"
/protein_id="YP_002984901.1"
/db_xref="GI:241666817"
/db_xref="InterPro:IPR001440"
/db_xref="InterPro:IPR010177"
/db_xref="InterPro:IPR011031"
/db_xref="InterPro:IPR013026"
/db_xref="InterPro:IPR013105"
/db_xref="GeneID:8022652"
/translation="MAASVRSAAVRGTHLLFFLLLAFAGRSLASDDISIPASDPQISI
HEGFVDERTCASCHADQAAAFSKSHHAKAMALADNGTVRGDFDNSRFEHDGVVTTFTR
RAGRFFVNTEGADGGQAEFEVKYTFAYEPLQQYLVDIGGGRLQALDIAWDTARRQWFW
LGNGTPAKPGSTYHWTGPFYRWNRTCIDCHSTDPQAGFQPQTNEYKSTYVATSIGCQS
CHGPGAKHVALARSGNASSSVKPDTGLPKVDAGICFACHARRTKLLDGYQPGKPFLDY
FSPALLRQDLYFPDGQILDEVFEYGSFQQSKMARAGVTCLDCHRPHEAGLKAEGNALC
TQCHTETKPDRFVNQDPSGRFDTPAHTHHQAGSTGAQCANCHMPERTYMKVDPRRDHS
FVIPRPDLSATLGTPNACTTCHVGETDDWAAETMDEWYGTQWRKRASIAHAFAGATNG
DQAAVEALRALVSDQKQAGIVRGSAIAALSGISGVDITADIRTAATDADPLVRLGAAE
AAGNIPPEQRLDAISNLLSDATRAVRVAAANALASTPPELFGNQRENFEAAVADLRAY
VETNGDVAETQSNYGFFLFARQRTAEAEAAFRRAISLDPTLEATRINLAEFYRATGQN
DRSEQTYAEAIAMAPARADLRYGHALSLVRRQALTEAITELEEAVRLDPQNPRYKTTF
AVALDSAGRTEEALGRLDGWAAGGDADIIGLALQYSLKLRHLPEALKHAEDLARLRPQ
DPQISGLIGQLKQAINGK"
sig_peptide 357736..357825
/locus_tag="Rleg_6906"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.987) with cleavage site probability 0.980 at
residue 30"
misc_feature <358291..358506
/locus_tag="Rleg_6906"
/note="Cytochrome c554 and c-prime; Region:
Cytochrome_C554; pfam13435"
/db_xref="CDD:205613"
misc_feature 358630..358977
/locus_tag="Rleg_6906"
/note="Cytochrome c554 and c-prime; Region:
Cytochrome_C554; pfam13435"
/db_xref="CDD:205613"
misc_feature 358657..358980
/locus_tag="Rleg_6906"
/note="Heme-binding domain of the class III cytochrome C
family and related proteins; Region: Cytochrom_C3;
cd08168"
/db_xref="CDD:173979"
misc_feature order(358678..358680,358687..358692,358699..358701,
358735..358737,358813..358815,358849..358851,
358858..358863,358963..358965,358972..358977)
/locus_tag="Rleg_6906"
/note="heme-binding residues [chemical binding]; other
site"
/db_xref="CDD:173979"
misc_feature 359389..359652
/locus_tag="Rleg_6906"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(359410..359412,359422..359424,359431..359433,
359476..359478,359512..359514,359524..359526,
359533..359535,359578..359580,359614..359616,
359626..359628,359635..359637)
/locus_tag="Rleg_6906"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature order(359467..359472,359476..359481,359488..359493,
359569..359574,359581..359586,359593..359598)
/locus_tag="Rleg_6906"
/note="binding surface"
/db_xref="CDD:29151"
gene 360103..360891
/locus_tag="Rleg_6907"
/db_xref="GeneID:8022653"
CDS 360103..360891
/locus_tag="Rleg_6907"
/inference="similar to AA sequence:KEGG:RHECIAT_CH0002048"
/note="KEGG: rec:RHECIAT_CH0002048 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984902.1"
/db_xref="GI:241666818"
/db_xref="GeneID:8022653"
/translation="MKAIYLRAILLLAGISAASGGNAADITPLTPEAKTVESQSGWEF
TFAPYFWAAGLSGDIGQFGLPEVHVDADFGDILQNLDFAFMAAGEARYDRFSIVGDVI
YTKLGADADTPAGILAESVDVTSKTFAGFLGVGYAVLEDQNGHLDVVGGMKVWSAKTE
ISFNGGILAGVDVEDSATWVDAVAGVRGNYFFTPEIYLTGWGLVGAGGADLDWDVALG
LGYKFNDSISAVAGYRALGVNYDNDGFVFDVVQQGPIFGVAIRF"
sig_peptide 360103..360174
/locus_tag="Rleg_6907"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.942 at
residue 24"
gene 361128..361931
/locus_tag="Rleg_6908"
/db_xref="GeneID:8022654"
CDS 361128..361931
/locus_tag="Rleg_6908"
/inference="similar to AA sequence:KEGG:Smed_5626"
/note="KEGG: smd:Smed_5626 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984903.1"
/db_xref="GI:241666819"
/db_xref="GeneID:8022654"
/translation="MTNVASRMALVVAALSLWAGTASAQSSEELAKKLSNPIASLISV
PFQFNYDHGYGPEDGDKATMNIQPVIPFSLNEDWNLISRTILPVTWQNDIAGPSGTQF
GLGDTLQSFFLSPSKPTESGVVWGAGPVFLLPTGTDELLGSGKWGAGPTAVVLKQDGP
WTYGMLGNHIWSFAGQSDRRDVSSTFMQPFISYTTKDAWTFSLNTESTYDWEANDWSV
PINFAVAKLITIDKQPISLTAGIRYWAAAPDNGPEGLGFRVAVTFLFPK"
sig_peptide 361128..361202
/locus_tag="Rleg_6908"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.921 at
residue 25"
gene 362483..363895
/locus_tag="Rleg_6909"
/db_xref="GeneID:8022655"
CDS 362483..363895
/locus_tag="Rleg_6909"
/inference="protein motif:PFAM:PF06863"
/note="PFAM: protein of unknown function DUF1254; protein
of unknown function DUF1214;
KEGG: bja:blr2659 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984904.1"
/db_xref="GI:241666820"
/db_xref="InterPro:IPR006311"
/db_xref="InterPro:IPR010621"
/db_xref="InterPro:IPR010679"
/db_xref="GeneID:8022655"
/translation="MQLTRRDFTRASLLAAGLLGLRSTGAAADDVTAEEARAIAKEAY
TYGFPAVDSYRIQYAYFVDDKNPEYKAPWNHLKNIPRVYTPADTAIQTPNSDTPYSMI
GLDLRAEPMVLTVPVIEKDRYFSIQLIDAYTFNFDYAGSRTTGNDGGSFLVAGPEWKG
EMPAGIKNVFRAETDLVIGAYRTQLFNTDDLDNVKKIQDGYKAEPLSSFLGKPAPAAA
PAIDFIKPVSPDDERKSLEFFNILNFVLRFCSLNPSETELMARFAKIGIGAGKTIDVA
ALSPGMKTTMEQGMADAWADLGILKKQIDAGTVTSGDMFGTREYLKNNYLYRMAAAVL
GIYGNSKQEAMYPVYAIDTEGQKLDGANRYTVHFAADKMPPVHAFWSLTMYDLPASLL
VANPIDRYLLNKPMLPQFVKDSDGGYTFYVQNGSPGKDKEPNWLPAPKGPFFVAMRLY
WPKDEALDGTWKHPPMAKTS"
sig_peptide 362483..362569
/locus_tag="Rleg_6909"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.958 at
residue 29"
misc_feature 362570..363892
/locus_tag="Rleg_6909"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG5361"
/db_xref="CDD:34931"
misc_feature 362702..363088
/locus_tag="Rleg_6909"
/note="Protein of unknown function (DUF1254); Region:
DUF1254; pfam06863"
/db_xref="CDD:203538"
misc_feature 363722..363847
/locus_tag="Rleg_6909"
/note="Protein of unknown function (DUF1214); Region:
DUF1214; pfam06742"
/db_xref="CDD:203510"
gene 364094..364636
/locus_tag="Rleg_6910"
/db_xref="GeneID:8022656"
CDS 364094..364636
/locus_tag="Rleg_6910"
/inference="similar to AA sequence:KEGG:RHE_PE00082"
/note="KEGG: ret:RHE_PE00082 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984905.1"
/db_xref="GI:241666821"
/db_xref="GeneID:8022656"
/translation="MKIPTVMVLMAALLQPVSAFGETEWMGGARQWSVGFSNESPHPY
CRLLWDSEIGKTMEFRQSATETFWLVAKTTWDIPAGTKTEVTLTDRTVTKVIAADFFD
KNTLRLWGPASKGSAGLKKIIKNSFAGMPDVQITFAGDEGDWMLPLSRVEQLYPTYLQ
CLKRLEAGEKPKKNSETQPF"
sig_peptide 364094..364159
/locus_tag="Rleg_6910"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.961 at
residue 22"
gene complement(364644..366131)
/locus_tag="Rleg_6911"
/db_xref="GeneID:8022657"
CDS complement(364644..366131)
/locus_tag="Rleg_6911"
/inference="protein motif:PFAM:PF00221"
/note="PFAM: phenylalanine/histidine ammonia-lyase;
KEGG: rec:RHECIAT_PA0000088 histidine ammonia-lyase
protein"
/codon_start=1
/transl_table=11
/product="phenylalanine/histidine ammonia-lyase"
/protein_id="YP_002984906.1"
/db_xref="GI:241666822"
/db_xref="InterPro:IPR001106"
/db_xref="GeneID:8022657"
/translation="MTVTIDAGLTWREVARVAAGEELALSPAAFARVEQASRIVARIV
ETGARAYGINTGVGALADTVVDRASQSLLSRSIVLSHACGVGPLLAAREVRAIIAAGI
ANFAHGHSGVRREIVEHLAALLEHDCIPDVPSKGSAGYLVHNAHIALVLIGEGSAQLD
GRRMSGRETLAAIGLEPLVLGAKEGLSLVNGTACATGLTTVALSRAERLLDWADAIAA
LTLEAAGCQIGAFDEVVLALRPSAGIENVGASLRARLQGSGLVAAAFGRRTQDALSLR
SVPHAHGAARDVFDNSARVVDQELASVTDNPAVSGTPEQPIVSSEAHAVAPALGQAAD
SLAIALAQIGAISERRLDRLVNPLVSGLPPFLASDAGSHSGFMIAQYTAAALSNENRR
LAAPAAMDGGLTSGLQEDFLAHPTAAAGKLLAVIDNAEYILAVELMAAAQAHDFLATT
APRAAGTDLVYQAVRERVSHYGDERPLNGDIEAVRSLIRETAPPL"
misc_feature complement(364791..366110)
/locus_tag="Rleg_6911"
/note="Phenylalanine ammonia-lyase (PAL) and histidine
ammonia-lyase (HAL); Region: PAL-HAL; cd00332"
/db_xref="CDD:176460"
misc_feature complement(order(365172..365174,365214..365216,
365304..365306,365313..365315,365562..365564,
365574..365588,365901..365903,365910..365912,
365961..365963,365967..365969,365973..365981))
/locus_tag="Rleg_6911"
/note="active sites [active]"
/db_xref="CDD:176460"
misc_feature complement(order(364848..364853,364860..364862,
364869..364874,364890..364892,364899..364919,
364950..364961,364965..364982,364986..364988,
364992..365003,365007..365012,365016..365021,
365055..365057,365064..365066,365073..365075,
365085..365087,365097..365099,365106..365108,
365127..365129,365139..365141,365148..365153,
365157..365177,365181..365183,365202..365210,
365223..365228,365235..365240,365247..365252,
365259..365261,365268..365273,365289..365294,
365301..365306,365310..365318,365322..365324,
365400..365402,365409..365411,365415..365420,
365427..365432,365685..365687,365694..365696,
365724..365729,365811..365813,365874..365897,
365904..365906,365961..365966))
/locus_tag="Rleg_6911"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176460"
gene complement(366128..366904)
/locus_tag="Rleg_6912"
/db_xref="GeneID:8022658"
CDS complement(366128..366904)
/locus_tag="Rleg_6912"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: AAA ATPase;
KEGG: ret:RHE_PE00080 octopine ABC transporter,
ATP-binding protein"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_002984907.1"
/db_xref="GI:241666823"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8022658"
/translation="MPGVTRLSVRNIRKSFGTHEVLRGISLDAEDGDVISLLGASGSG
KSTFLRCINMLETASDGEIWVDGEEIRMVHKNGRSKPASQKQVDHIRSELGMVFQSFN
LWSHMTILQNVIEGPIHVLKRPRADCIAEAEALLEKVGIADKRHAYPAHLSGGQQQRA
AIARALAMKPKVMLFDEPTSALDPELVGEVLRVMRSLAEEGMTMLVVTHEMSFARNVS
NRVVFMREGLIESSGKPEEMFTGGATPAFRQFIGHFGSGQ"
misc_feature complement(366149..366898)
/locus_tag="Rleg_6912"
/note="ABC-type histidine transport system, ATPase
component [Amino acid transport and metabolism]; Region:
HisP; COG4598"
/db_xref="CDD:34233"
misc_feature complement(366218..366886)
/locus_tag="Rleg_6912"
/note="ATP-binding cassette domain of the histidine and
glutamine transporters; Region: ABC_HisP_GlnQ; cd03262"
/db_xref="CDD:213229"
misc_feature complement(366767..366790)
/locus_tag="Rleg_6912"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213229"
misc_feature complement(order(366278..366280,366374..366379,
366608..366610,366764..366772,366776..366781))
/locus_tag="Rleg_6912"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213229"
misc_feature complement(366608..366619)
/locus_tag="Rleg_6912"
/note="Q-loop/lid; other site"
/db_xref="CDD:213229"
misc_feature complement(366422..366451)
/locus_tag="Rleg_6912"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213229"
misc_feature complement(366374..366391)
/locus_tag="Rleg_6912"
/note="Walker B; other site"
/db_xref="CDD:213229"
misc_feature complement(366356..366367)
/locus_tag="Rleg_6912"
/note="D-loop; other site"
/db_xref="CDD:213229"
misc_feature complement(366272..366292)
/locus_tag="Rleg_6912"
/note="H-loop/switch region; other site"
/db_xref="CDD:213229"
gene complement(366930..367634)
/locus_tag="Rleg_6913"
/db_xref="GeneID:8022897"
CDS complement(366930..367634)
/locus_tag="Rleg_6913"
/inference="protein motif:TFAM:TIGR01726"
/note="TIGRFAM: polar amino acid ABC transporter, inner
membrane subunit;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: ret:RHE_PE00079 octopine ABC transporter, permease
protein"
/codon_start=1
/transl_table=11
/product="polar amino acid ABC transporter, inner membrane
subunit"
/protein_id="YP_002984908.1"
/db_xref="GI:241666824"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR010065"
/db_xref="GeneID:8022897"
/translation="MDFTFIASTLVTLLKAVPTTLILFSLSILTGGLLALVIVWMRTS
GNPVLSSFAKGYIFIFRGSPLLIQMFLVFYGLGQFGFIRYSFLWPFLREPMVCAVLSL
ALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMSGFLLVRRILAPIAFRHALPAYSTEI
VLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEVFLCAAIIYLVLNFIILQGMALLE
YSLSRHRRAAPQALKA"
misc_feature complement(367005..367532)
/locus_tag="Rleg_6913"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(367011..367016,367023..367028,
367032..367037,367044..367049,367077..367082,
367119..367124,367131..367142,367161..367163,
367170..367175,367215..367217,367266..367268,
367275..367280,367290..367292,367296..367301,
367308..367310,367314..367316,367320..367325,
367416..367418,367422..367427,367434..367463,
367467..367478,367506..367508,367521..367526))
/locus_tag="Rleg_6913"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(367125..367142,367416..367460))
/locus_tag="Rleg_6913"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(367047..367049,367077..367079,
367086..367088,367122..367124,367338..367340,
367416..367418))
/locus_tag="Rleg_6913"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(367194..367196,367206..367211,
367227..367265))
/locus_tag="Rleg_6913"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(367645..368370)
/locus_tag="Rleg_6914"
/db_xref="GeneID:8022942"
CDS complement(367645..368370)
/locus_tag="Rleg_6914"
/inference="protein motif:TFAM:TIGR01726"
/note="TIGRFAM: polar amino acid ABC transporter, inner
membrane subunit;
PFAM: binding-protein-dependent transport systems inner
membrane component;
KEGG: rec:RHECIAT_PA0000085 octopine ABC transporter,
permease protein"
/codon_start=1
/transl_table=11
/product="polar amino acid ABC transporter, inner membrane
subunit"
/protein_id="YP_002984909.1"
/db_xref="GI:241666825"
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR010065"
/db_xref="GeneID:8022942"
/translation="MASLELLGFGSTGWGALLIAAALMTLAVTATALAIGAVLGAIVA
AAKLSGNLVLVTLGNVYTTVFRGVPELLIIYLIYFGGSSAVTSIGQAMGYEGFLGLPS
FIAGALAVGIISGAYQAEVFRSAFLAISKGELEAASAIGMHRGMRLRRIIMPQVFRLA
IPGLGNVWQLSLKDSALISVTGLAELMRTSQVAAGSTRQYFLFFIAGGCLYLLLTSLS
DRIFNGAERRANRSMPASAMGQA"
sig_peptide complement(368266..368370)
/locus_tag="Rleg_6914"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.991) with cleavage site probability 0.362 at
residue 35"
misc_feature complement(367663..368232)
/locus_tag="Rleg_6914"
/note="ABC-type arginine transport system, permease
component [Amino acid transport and metabolism]; Region:
ArtQ; COG4215"
/db_xref="CDD:33942"
misc_feature complement(367714..368202)
/locus_tag="Rleg_6914"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature complement(order(367714..367716,367723..367728,
367735..367740,367744..367749,367756..367761,
367789..367794,367831..367836,367843..367854,
367873..367875,367882..367887,367927..367929,
367978..367980,367987..367992,368002..368004,
368008..368013,368020..368022,368026..368028,
368032..368037,368137..368139,368143..368148,
368155..368184,368188..368199))
/locus_tag="Rleg_6914"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(367837..367854,368137..368181))
/locus_tag="Rleg_6914"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature complement(order(367759..367761,367789..367791,
367798..367800,367834..367836,368050..368052,
368137..368139))
/locus_tag="Rleg_6914"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature complement(order(367906..367908,367918..367923,
367939..367977))
/locus_tag="Rleg_6914"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene complement(368588..369430)
/locus_tag="Rleg_6915"
/db_xref="GeneID:8022943"
CDS complement(368588..369430)
/locus_tag="Rleg_6915"
/inference="protein motif:PFAM:PF00497"
/note="PFAM: extracellular solute-binding protein family
3;
SMART: extracellular solute-binding protein family 3;
KEGG: rec:RHECIAT_PA0000084 probable octopine ABC
transporter, substrate-binding protein"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein family 3"
/protein_id="YP_002984910.1"
/db_xref="GI:241666826"
/db_xref="InterPro:IPR001638"
/db_xref="GeneID:8022943"
/translation="MKFSAILFCGVAAFSAFAAPAFSKDWTKATITLEGAYAPWNLTN
ADGTLGGFEPELAKVLCERAKIECTLVASDWDGMIPALNAGKFDVIMDALSITEERKQ
VIGFTIPYAATPAAFATAKDSPLAKAAGTGATIKMTPGQTGVKEIDALKAAFKGKTIG
IQAATVYAKFVYDNFGDIAEIREYKTGADRDLDLQNGRIDLGFDDAVYFANAFKAAND
TLDFTGPEIVGSIWGEGEGLGVRKADTDLRDKFNEAIKSTLADGTVKNLSMKWFQVDV
SPQE"
sig_peptide complement(369359..369430)
/locus_tag="Rleg_6915"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.736 at
residue 24"
misc_feature complement(368615..369343)
/locus_tag="Rleg_6915"
/note="Bacterial periplasmic transport systems use
membrane-bound complexes and substrate-bound,
membrane-associated, periplasmic binding proteins (PBPs)
to transport a wide variety of substrates, such as, amino
acids, peptides, sugars, vitamins and inorganic...;
Region: PBPb; cd00134"
/db_xref="CDD:29040"
misc_feature complement(368615..369343)
/locus_tag="Rleg_6915"
/note="Bacterial extracellular solute-binding proteins,
family 3; Region: SBP_bac_3; pfam00497"
/db_xref="CDD:201266"
misc_feature complement(order(368816..368818,368933..368935,
369131..369133,369206..369208,369320..369322))
/locus_tag="Rleg_6915"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29040"
misc_feature complement(order(368837..368839,368855..368857,
368867..368869))
/locus_tag="Rleg_6915"
/note="membrane-bound complex binding site; other site"
/db_xref="CDD:29040"
misc_feature complement(368720..368737)
/locus_tag="Rleg_6915"
/note="hinge residues; other site"
/db_xref="CDD:29040"
gene 369628..370383
/locus_tag="Rleg_6916"
/db_xref="GeneID:8022944"
CDS 369628..370383
/locus_tag="Rleg_6916"
/inference="protein motif:TFAM:TIGR02018"
/note="KEGG: ret:RHE_PE00076 histidine utilization
transcriptional regulator (repressor) protein;
TIGRFAM: histidine utilization repressor;
PFAM: UbiC transcription regulator-associated domain
protein; regulatory protein GntR HTH;
SMART: regulatory protein GntR HTH"
/codon_start=1
/transl_table=11
/product="transcriptional regulator, histidine utilization
repressor, GntR family"
/protein_id="YP_002984911.1"
/db_xref="GI:241666827"
/db_xref="InterPro:IPR000524"
/db_xref="InterPro:IPR010248"
/db_xref="InterPro:IPR011663"
/db_xref="GeneID:8022944"
/translation="MKRPGEMKRELAENDSTPLYAGVKQVILDRIQSGEWPPKYRVPS
ENELVVELGVSKMTANRALRELANEGELVRIQGVGSFVAERKGYSALFEVRNIAEEIA
ERGHVHEASVVVLAQEAASPEVADALELPIGAAVFHSLIVHSENGVPVQIEDRFVHPE
AAPEYLVQDFSTLTPNAYLTASAPLSGSEHVVEAAMPQAWECKLLTIMKTEPCLTIRR
RTWSAKQVVSTARLVYPGHRYRLEARSGKMFEE"
misc_feature 369679..370359
/locus_tag="Rleg_6916"
/note="histidine utilization repressor, proteobacterial;
Region: his_ut_repres; TIGR02018"
/db_xref="CDD:188194"
misc_feature 369679..369876
/locus_tag="Rleg_6916"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature order(369679..369681,369685..369687,369754..369756,
369760..369765,369787..369801,369805..369810,
369817..369819,369847..369852,369856..369867)
/locus_tag="Rleg_6916"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature 369934..370347
/locus_tag="Rleg_6916"
/note="UTRA domain; Region: UTRA; pfam07702"
/db_xref="CDD:203732"
gene 370509..370745
/locus_tag="Rleg_6917"
/db_xref="GeneID:8022945"
CDS 370509..370745
/locus_tag="Rleg_6917"
/inference="similar to AA sequence:KEGG:AGR_pAT_694"
/note="KEGG: atc:AGR_pAT_694 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984912.1"
/db_xref="GI:241666828"
/db_xref="GeneID:8022945"
/translation="MPKYFFHVRRNDVFNEDLEGIDLATPELAFEEATAAAREIVAER
IRMGDPTDGDTFEIRTEDGSLVATVPFRSAVQLN"
gene 370855..371622
/locus_tag="Rleg_6918"
/db_xref="GeneID:8022946"
CDS 370855..371622
/locus_tag="Rleg_6918"
/inference="similar to AA sequence:KEGG:RHECIAT_CH0003417"
/note="KEGG: rec:RHECIAT_CH0003417 hypothetical protein"
/codon_start=1
/transl_table=11
/product="putative transcriptional regulator, Crp/Fnr
family"
/protein_id="YP_002984913.1"
/db_xref="GI:241666829"
/db_xref="GeneID:8022946"
/translation="MTIIRQSGTKNRLLRRFPEEAFGRLAPFLEPVDLPVKHALVLPR
KPIEHVCFLESGLASMVAESSDGKSVEIRHIGREGIAGYPVVLGVDRTPNSTFMQVPG
HGLQVATEHFVPILEHPEVRQLLLRYIHTCELQLAHSALAAAKFNVHQRLARWLLMCH
DRIDGNDLPLTHEFLALMLGVRRAGVTDELHILEGIYAIKSTRGNVRILDRDMLIEIA
DGCYGVPEQEYERLIETSARPSVLPVHPNGNPLHGIL"
misc_feature 370879..371490
/locus_tag="Rleg_6918"
/note="cAMP-binding proteins - catabolite gene activator
and regulatory subunit of cAMP-dependent protein kinases
[Signal transduction mechanisms]; Region: Crp; COG0664"
/db_xref="CDD:31008"
misc_feature 370891..371232
/locus_tag="Rleg_6918"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
cd00038"
/db_xref="CDD:28920"
misc_feature order(371098..371103,371128..371136)
/locus_tag="Rleg_6918"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:28920"
misc_feature order(371194..371202,371209..371217)
/locus_tag="Rleg_6918"
/note="flexible hinge region; other site"
/db_xref="CDD:28920"
misc_feature 371302..371505
/locus_tag="Rleg_6918"
/note="Crp-like helix-turn-helix domain; Region:
HTH_Crp_2; pfam13545"
/db_xref="CDD:205723"
gene complement(371700..371861)
/locus_tag="Rleg_6919"
/db_xref="GeneID:8022947"
CDS complement(371700..371861)
/locus_tag="Rleg_6919"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984914.1"
/db_xref="GI:241666830"
/db_xref="GeneID:8022947"
/translation="MRAAGSVTVRHVISRTPKNQWYVAEAAKVMRSFRRNAIGRCWVA
CASTFGWAG"
misc_feature complement(<371787..>371861)
/locus_tag="Rleg_6919"
/note="Src homology 2 (SH2) domain; Region: SH2; cl15255"
/db_xref="CDD:246908"
misc_feature complement(order(371826..371828,371829..371831))
/locus_tag="Rleg_6919"
/note="phosphotyrosine binding pocket [polypeptide
binding]; other site"
/db_xref="CDD:198173"
gene complement(371943..372662)
/locus_tag="Rleg_6920"
/db_xref="GeneID:8022948"
CDS complement(371943..372662)
/locus_tag="Rleg_6920"
/inference="protein motif:TFAM:TIGR02018"
/note="KEGG: rec:RHECIAT_PA0000081 putative
transcriptional regulator protein, GntR family;
TIGRFAM: histidine utilization repressor;
PFAM: UbiC transcription regulator-associated domain
protein; regulatory protein GntR HTH;
SMART: regulatory protein GntR HTH"
/codon_start=1
/transl_table=11
/product="transcriptional regulator, histidine utilization
repressor, GntR family"
/protein_id="YP_002984915.1"
/db_xref="GI:241666831"
/db_xref="InterPro:IPR000524"
/db_xref="InterPro:IPR010248"
/db_xref="InterPro:IPR011663"
/db_xref="GeneID:8022948"
/translation="MNQSKDPTLHQRILSDIEGRIVSGDWPPGHRIPFEVDLATQYDC
SRMTVNKVLTQLAKAGLIERRKKSGSFVTQPQAQSAILEIHDIKAEVRSLNLPYSYAV
SKKVSRKAKVDDSRRLELPVASSVVEVVCIHNAGARPFCLEERLISLATVPEAADADF
LTTAPGPWLLNQVPWSTAEHRIHAVSANAEVAAVLDIARNTACLVVERRTWSNAGPVT
HVRFTYPGDRHALVARFTPAS"
misc_feature complement(372444..372641)
/locus_tag="Rleg_6920"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature complement(order(372453..372464,372468..372473,
372501..372503,372510..372515,372519..372533,
372555..372560,372564..372566,372633..372635,
372639..372641))
/locus_tag="Rleg_6920"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(371952..372638)
/locus_tag="Rleg_6920"
/note="histidine utilization repressor, proteobacterial;
Region: his_ut_repres; TIGR02018"
/db_xref="CDD:188194"
misc_feature complement(371976..372317)
/locus_tag="Rleg_6920"
/note="UTRA domain; Region: UTRA; pfam07702"
/db_xref="CDD:203732"
gene complement(372781..374127)
/locus_tag="Rleg_6921"
/db_xref="GeneID:8022949"
CDS complement(372781..374127)
/locus_tag="Rleg_6921"
/inference="protein motif:TFAM:TIGR02022"
/note="catalyzes the deimination of
N-formimino-L-glutamate to ammonia and
N-formyl-L-glutamate"
/codon_start=1
/transl_table=11
/product="N-formimino-L-glutamate deiminase"
/protein_id="YP_002984916.1"
/db_xref="GI:241666832"
/db_xref="InterPro:IPR006680"
/db_xref="InterPro:IPR010252"
/db_xref="GeneID:8022949"
/translation="MTTLHADTALTPQGWQKDVRLTLEAGRIARVEIGTSPEPGDECH
ALLVPAMANLHSHAFQRAMAGLAEVRGPANDSFWSWRTVMYKFALAMTPDHVEAVAAK
LYAEMLEAGFSRVGEFHYLHHDRDGGTYANIAELAERIGAASQETGIGLTLLPVFYAH
SGFGGAAPIDGQRRFINSLESFERLMEGCRAVTGRLDGAELGLAPHSLRAATPEELTR
LVPMAGDGPIHIHVAEQVKEVEDCIAWSGARPVQWLLDHAPMDERWCLIHATHMTEDE
TRRMAKSGAIAGLCPITEANLGDGAFAAPLFLEEGGRYGIGSDSNVLISVPEELRQLE
YSQRLALRARNVVAAPGGSTALSLFTHALAGGGAALKAPAGLAEGHHADIVSLDTTAV
PYLAGDQILDHWLFAGGISVDCVWAHGRKQVEGGRHLKRDAIDRRFLAAMGELLAD"
misc_feature complement(372784..374127)
/locus_tag="Rleg_6921"
/note="N-formimino-L-glutamate deiminase; Validated;
Region: PRK09229"
/db_xref="CDD:181712"
misc_feature complement(372868..374103)
/locus_tag="Rleg_6921"
/note="Metallo-dependent hydrolases, subgroup D is part of
the superfamily of metallo-dependent hydrolases, a large
group of proteins that show conservation in their
3-dimensional fold (TIM barrel) and in details of their
active site. The vast majority of the...; Region:
Met_dep_hydrolase_E; cd01313"
/db_xref="CDD:30056"
misc_feature complement(order(373171..373173,373324..373326,
373435..373437,373957..373959,373963..373965))
/locus_tag="Rleg_6921"
/note="active site"
/db_xref="CDD:30056"
gene 374250..375512
/locus_tag="Rleg_6922"
/db_xref="GeneID:8022950"
CDS 374250..375512
/locus_tag="Rleg_6922"
/EC_number="3.5.2.7"
/inference="protein motif:TFAM:TIGR01224"
/note="catalyzing the hydrolysis of
4-imidazolone-5-propionate to N-formimidoyl-L-glutamate,
the third step in the histidine degradation pathway"
/codon_start=1
/transl_table=11
/product="imidazolonepropionase"
/protein_id="YP_002984917.1"
/db_xref="GI:241666833"
/db_xref="InterPro:IPR005920"
/db_xref="InterPro:IPR006680"
/db_xref="InterPro:IPR013108"
/db_xref="GeneID:8022950"
/translation="MTGNIFSDEAPSADTRPVLWRNARLATLASAKEGLGIVEKGAVL
IENGRIAFAGAESELPASAIERSEIVDLEGRWVTPGLVDCHTHIVHGGNRAREFEMRL
AGATYEEVARAGGGIVSSVKATNALSVEELVAQALPRLDTLLAEGVTTIEVKSGYGLN
RTGEVKMLQSARLLGHVRPVRVATSYLGAHATPVEYKGRNGDYLDDVVLPGLDDMHGL
GLADAVDGFCEGIAFSTTEIARVFDKAKALGLPVKLHAEQLSNLGGARLAASYGALSA
DHLEYLDEDGVAAMAAAGTVAVLLPGAFYAIHEKQKPPVEALRRAGVPIAIATDCNPG
TSPLTSMLLTMNMSATLFGLTVEECIAGATREGARALGLLDQTGTLEPGKSADLAVWN
IESLAELVYRIGFNPIHARVFKGERNGR"
misc_feature 374292..375497
/locus_tag="Rleg_6922"
/note="imidazolonepropionase; Validated; Region: PRK09356"
/db_xref="CDD:181795"
misc_feature 374376..375494
/locus_tag="Rleg_6922"
/note="Imidazolonepropionase/imidazolone-5-propionate
hydrolase (Imidazolone-5PH) catalyzes the third step in
the histidine degradation pathway, the hydrolysis of
(S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to
N-formimidoyl-L-glutamate. In bacteria; Region:
Imidazolone-5PH; cd01296"
/db_xref="CDD:30039"
misc_feature order(374502..374504,374508..374510,375012..375014,
375021..375023,375081..375083,375237..375239)
/locus_tag="Rleg_6922"
/note="active site"
/db_xref="CDD:30039"
gene 375509..377044
/locus_tag="Rleg_6923"
/db_xref="GeneID:8022951"
CDS 375509..377044
/locus_tag="Rleg_6923"
/EC_number="4.3.1.3"
/inference="protein motif:TFAM:TIGR01225"
/note="catalyzes the degradation of histidine to urocanate
and ammmonia"
/codon_start=1
/transl_table=11
/product="histidine ammonia-lyase"
/protein_id="YP_002984918.1"
/db_xref="GI:241666834"
/db_xref="InterPro:IPR001106"
/db_xref="InterPro:IPR005921"
/db_xref="GeneID:8022951"
/translation="MTITLHPGSVSLKDLETVYWTGVPARLDPAFDAGIAKAAARIAE
IAAGNAPVYGINTGFGKLASIKIDSADVTTLQRNLILSHCCGVGAPLPENIARLIMAL
KLVSLGRGASGVRLELVRLIEGMLEKGVIPLIPEKGSVGASGDLAPLAHMAAVMMGEA
EAFFAGERLPGAQALERAGLKPVVLAAKEGLALINGTQTSTALALAGLFRAHRAAQAA
LITGAMSTDAAMGSSAPFHPDIHTLRGHKGQIDTAAALRALLENSIIRQSHIEGDERV
QDPYCIRCQPQVDGACLDLLRSVARTLEIEANAVTDNPLVLSDNSVVSGGNFHAEPVA
FAADQIALAVCEIGAISQRRIALLVDPTLSYGLPAFLAKKPGLNSGLMIAEVTSAALM
SENKQMSHPASVDSTPTSANQEDHVSMACHGARRLLAMTENLFGIIGIEALTAAQGVE
LRAPLSTSPELGKAITAIRTKVASLDVDRYMANDLAAAAELVATGALNASVSSGILPV
LES"
misc_feature 375530..376864
/locus_tag="Rleg_6923"
/note="Phenylalanine ammonia-lyase (PAL) and histidine
ammonia-lyase (HAL); Region: PAL-HAL; cd00332"
/db_xref="CDD:176460"
misc_feature order(375665..375673,375677..375679,375683..375685,
375734..375736,375743..375745,376067..376081,
376091..376093,376346..376348,376355..376357,
376445..376447,376478..376480)
/locus_tag="Rleg_6923"
/note="active sites [active]"
/db_xref="CDD:176460"
misc_feature order(375680..375685,375740..375742,375749..375772,
375833..375835,375917..375922,375959..375961,
375968..375970,376223..376228,376235..376240,
376244..376246,376253..376255,376337..376339,
376343..376351,376355..376360,376367..376372,
376388..376393,376400..376402,376409..376414,
376421..376426,376433..376438,376451..376459,
376469..376471,376475..376495,376499..376504,
376511..376513,376523..376525,376544..376546,
376553..376555,376565..376567,376577..376579,
376586..376588,376595..376597,376634..376639,
376643..376648,376652..376663,376667..376669,
376673..376690,376694..376705,376736..376756,
376763..376765,376781..376786,376793..376795,
376802..376807)
/locus_tag="Rleg_6923"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176460"
gene 377046..377867
/locus_tag="Rleg_6924"
/db_xref="GeneID:8022952"
CDS 377046..377867
/locus_tag="Rleg_6924"
/inference="protein motif:TFAM:TIGR02017"
/note="TIGRFAM: N-formylglutamate amidohydrolase;
PFAM: N-formylglutamate amidohydrolase;
KEGG: ret:RHE_PE00071 formiminoglutamase protein"
/codon_start=1
/transl_table=11
/product="N-formylglutamate amidohydrolase"
/protein_id="YP_002984919.1"
/db_xref="GI:241666835"
/db_xref="InterPro:IPR007709"
/db_xref="InterPro:IPR010247"
/db_xref="GeneID:8022952"
/translation="MTIKEKVSVPCEIRQGTSPVILGFPHTGTEVPPEIADRLNDNGR
MLADTDWHIHRLYDGLLDNVTTVRATFHRYVIDANRDPAGVSLYPGQNTTGLVPQTDF
DGKAIWKEGAAPDEADIAARLRDFHAPYHAALAAEIERVRAIHGVAILYDCHSIRSHI
PFLFEGKLPDFNIGTDMGKTCDSAIEQATLTVVEAAEGYDSVLNGRFKGGWTTRHYGR
PETGVHAIQMELAQSTHLQSEAAPFAYDAAKADRLRVHLKNILVRIEQIAPGLKR"
misc_feature 377079..377849
/locus_tag="Rleg_6924"
/note="N-formylglutamate amidohydrolase; Region: FGase;
cl01522"
/db_xref="CDD:207437"
gene 377892..379565
/locus_tag="Rleg_6925"
/db_xref="GeneID:8022953"
CDS 377892..379565
/locus_tag="Rleg_6925"
/EC_number="4.2.1.49"
/inference="protein motif:TFAM:TIGR01228"
/note="catalyzes the formation of
4-imidazolone-5-propanoate from urocanate during histidine
metabolism"
/codon_start=1
/transl_table=11
/product="urocanate hydratase"
/protein_id="YP_002984920.1"
/db_xref="GI:241666836"
/db_xref="InterPro:IPR000193"
/db_xref="GeneID:8022953"
/translation="MSNPRHNIREIRAPRGNDLNAKSWMTEAPLRMLMNNLDPDVAEN
PNELVVYGGIGRAARTWEDFDRIVATLKTLTEEETLVVQSGKPVGVFRTHKDAPRVLI
ANSNLVPHWATWDHFNELDKKGLAMYGQMTAGSWIYIGTQGIVQGTYETFVEAGRQHY
GGNLKGKWILTGGLGGMGGAQPLAAVMAGACCLAVECNPDSIDFRLRTRYVDAKAETL
DEALEMIDRWTKAGEAKSVGLLGNAAEILPEMVRRGIRPDIVTDQTSAHDPINGYLPK
GWTMGEWKAKRETDPKAVEKAARASMREHVEAMIAFWNAGVPTLDYGNNIRQVAKDEG
LENAFAFPGFVPAYIRPLFCRGIGPFRWAALSGDPEDIYKTDAKVKELLPDNKHLHHW
LDMARERIAFQGLPARICWVGLGDRHKLGLAFNEMVRTGELSAPIVIGRDHLDSGSVA
SPNRETEAMKDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVICAD
GTDDAARRLERVLWNDPATGVMRHADAGYEIAIDCAKEKGLRLPGILGN"
misc_feature 377892..379553
/locus_tag="Rleg_6925"
/note="urocanate hydratase; Provisional; Region: PRK05414"
/db_xref="CDD:180062"
gene 379571..380146
/locus_tag="Rleg_6926"
/db_xref="GeneID:8022954"
CDS 379571..380146
/locus_tag="Rleg_6926"
/inference="protein motif:PFAM:PF05962"
/note="PFAM: protein of unknown function DUF886;
KEGG: rec:RHECIAT_PA0000075 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984921.1"
/db_xref="GI:241666837"
/db_xref="InterPro:IPR010282"
/db_xref="GeneID:8022954"
/translation="MRILRAGDHKRMPWKNGKGETVEIAVFPPGASINDFDWRISMAT
VAEDGPFSIFPGIDRTLAILDGNGMVLDVAGSKPVVLTMASDPLAFTADIPVAARLED
GAITDLNVMTRRNGLTHTLIRIDVDGGKSVPLSPSTCLLLCHFGALSFRRGGETGALA
AGDALLIEDATATVLKIDGEARCYLASITAG"
misc_feature 379580..380134
/locus_tag="Rleg_6926"
/note="HutD; Region: HutD; pfam05962"
/db_xref="CDD:147878"
gene 380322..380951
/locus_tag="Rleg_6927"
/db_xref="GeneID:8022955"
CDS 380322..380951
/locus_tag="Rleg_6927"
/inference="protein motif:PFAM:PF00226"
/note="PFAM: heat shock protein DnaJ domain protein;
SMART: heat shock protein DnaJ domain protein;
KEGG: rec:RHECIAT_PA0000074 putative molecular chaperone,
DnaJ family"
/codon_start=1
/transl_table=11
/product="heat shock protein DnaJ domain protein"
/protein_id="YP_002984922.1"
/db_xref="GI:241666838"
/db_xref="InterPro:IPR001623"
/db_xref="InterPro:IPR003095"
/db_xref="GeneID:8022955"
/translation="MTDPYDILGVERDADEAQLKAAYRRLAKVAHPDSGGDSDAFAHL
QKAYGLLLDPVRRKVYDDTGYDVEFADAAELQALVMIEKLVTDAVLDERAPGSFDPVA
VMQDSLSEELRKARFSKSELERHASRIGLHLERLEKQSGRDVLAHMFRARIEAISKAV
AETEAKIKATERAADMISGYVYDIDPPPLPDDTVTSIEWAEPSRNRSTG"
misc_feature 380328..380480
/locus_tag="Rleg_6927"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of Hsp70s; Region: DnaJ;
cd06257"
/db_xref="CDD:99751"
misc_feature order(380412..380420,380442..380447,380454..380459)
/locus_tag="Rleg_6927"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
gene complement(380977..381678)
/locus_tag="Rleg_6928"
/db_xref="GeneID:8022956"
CDS complement(380977..381678)
/locus_tag="Rleg_6928"
/inference="protein motif:PFAM:PF05988"
/note="PFAM: protein of unknown function DUF899
thioredoxin family protein;
KEGG: ret:RHE_PE00067 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984923.1"
/db_xref="GI:241666839"
/db_xref="InterPro:IPR010296"
/db_xref="GeneID:8022956"
/translation="MDNQHLVPAAVLAAKNGVRFPNESEAYRSARDALLAEEIELRRH
IERVARQRRALPPGGEVTKDYRFEGSDGPISFSELFADKETLIVYSYMFGPQRERPCP
MCTSLLSSWDGEVPDIQQRAALAVVARSPIEKLLAFKKERGWHHLPLYSDMTDDYSRD
YHAIGQDGGDDAAFNVFTRRDGTIRHFWSQEMGGVTADPGEDPRGAPDLMPLWTVIDS
TPEGRPADWYPKLSY"
misc_feature complement(380986..381624)
/locus_tag="Rleg_6928"
/note="Bacterial protein of unknown function (DUF899);
Region: DUF899; pfam05988"
/db_xref="CDD:191419"
gene complement(382156..382719)
/locus_tag="Rleg_6929"
/db_xref="GeneID:8022957"
CDS complement(382156..382719)
/locus_tag="Rleg_6929"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984924.1"
/db_xref="GI:241666840"
/db_xref="GeneID:8022957"
/translation="MGRFMKCIAELLMGLAGATLVVISAVHPAEANSDNGEDPSCEIV
NLAYAATMNATRSSVTAYAEQDDGSLVFIADLRTQLGTNYLKDSTRKQWIRYPQTKWV
PADRFGPKITDCVLKGDESHPDLAAKHYSAIRHEAPHVSKVDFWITHDDGRIVKMRIG
PWGVKLKSGLGVIEIRKFDDEALTPPL"
sig_peptide complement(382624..382719)
/locus_tag="Rleg_6929"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.971) with cleavage site probability 0.958 at
residue 32"
gene complement(382843..383103)
/locus_tag="Rleg_6930"
/pseudo
/db_xref="GeneID:8022958"
gene complement(383471..384349)
/locus_tag="Rleg_6931"
/db_xref="GeneID:8022959"
CDS complement(383471..384349)
/locus_tag="Rleg_6931"
/inference="protein motif:PFAM:PF06823"
/note="PFAM: protein of unknown function DUF1236;
KEGG: rec:RHECIAT_CH0001818 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984925.1"
/db_xref="GI:241666841"
/db_xref="InterPro:IPR009642"
/db_xref="GeneID:8022959"
/translation="MKSNHLAMLVAALSLSVSPLATLPAAAQQDTKSGSQAQSGSQTG
TDATSQAGSKATGTGTDCTPDASGACPQGKGQSSQQKSDQGSDMKKSAEQPSTDSSTS
GSSSGKSSTEAKPGSQDASGGTTTEQTPAAKSGSTDTSGSAKAGTKSSAETKPAEGTG
KGATTQSGDASKQSTDQNTSTTNKSSSETNVNSNATTNNQTSNTKTNVNISVEQQTEI
RQVVKEVHVEPVKEVNFTVSVGTTIPKKVRLEPLPPRIVKIVPQYESYRFFILADGRI
VIVDPDALTIVYIIEA"
sig_peptide complement(384266..384349)
/locus_tag="Rleg_6931"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.973 at
residue 28;
SNP /replace=T;
SNP /replace=C;
SNP /replace=C;
SNP /replace=G;
SNP /replace=C;
SNP /replace=T;
SNP /replace=G;
SNP /replace=G;
SNP /replace=G"
misc_feature complement(383477..>383650)
/locus_tag="Rleg_6931"
/note="Protein of unknown function (DUF1236); Region:
DUF1236; pfam06823"
/db_xref="CDD:203525"
gene complement(384449..384844)
/locus_tag="Rleg_6932"
/db_xref="GeneID:8022960"
CDS complement(384449..384844)
/locus_tag="Rleg_6932"
/inference="protein motif:PFAM:PF06823"
/note="PFAM: protein of unknown function DUF1236;
KEGG: rec:RHECIAT_CH0001817 hypothetical protein;
SNP /replace=G;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984926.1"
/db_xref="GI:241666842"
/db_xref="InterPro:IPR009642"
/db_xref="GeneID:8022960"
/translation="MKIKALGIAASILLASTSAFAQSSTVTGAAGGAATGAVVGGPVG
AAVGGIVGGVAGSVIDPPPQKVVTYVQQAPAPTERVVVKEKVVVGQPLPETVVVTPIP
DDPKYAYAIVNDQRVIVEPSSRKVIQVIQ"
sig_peptide complement(384779..384844)
/locus_tag="Rleg_6932"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.982 at
residue 22;
SNP /replace=C"
misc_feature complement(384452..384640)
/locus_tag="Rleg_6932"
/note="Protein of unknown function (DUF1236); Region:
DUF1236; pfam06823"
/db_xref="CDD:203525"
gene complement(385283..386749)
/locus_tag="Rleg_6933"
/db_xref="GeneID:8022961"
CDS complement(385283..386749)
/locus_tag="Rleg_6933"
/inference="protein motif:TFAM:TIGR00229"
/note="KEGG: atc:AGR_pAT_788 hypothetical protein;
TIGRFAM: PAS sensor protein;
PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS
fold domain protein; PAS fold-4 domain protein;
SMART: PAS domain containing protein; PAC
repeat-containing protein;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_002984927.1"
/db_xref="GI:241666843"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000700"
/db_xref="InterPro:IPR001610"
/db_xref="InterPro:IPR011102"
/db_xref="InterPro:IPR013655"
/db_xref="InterPro:IPR013656"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:8022961"
/translation="MHESNPAVPHQGELAALILRYDWANTSLGPVSSWPIQLRCAVDI
ALPSRAQIVMFCGPEFIAIYNDAYAPTIGAKHPAALGKPAKENWAELWDDLEPLLRKV
LETGETVFAKDRPFYIERHHKPETVYFDISYSPVFDENGRVLAVFCIVSETTGRVGYE
AKLKRLASIISSSEDAILGIDLAMMVTDWNDGAEKLYGYSSSEILGRSVTVLIPDNRV
DEEARIIARIKAGERIETHETIRRHRSGELLDVSLTVSPIYDAEGRIVGASKIARDIT
ARKEAERVQEVLIAELNHRVKNILATVAAIARQTFAGAPDAEAARAAFDARLQSLARA
HDLLTHGNWEAASLGNVVSEALSAYPAERLDISGPDLNISPKAVVALALIVHELATNA
AKYGALSAESGKIAVSWKLEGSPDPSLILLWSESGGPPVKPPLRRGFGSRLIEAMSSG
QLKGRAELAYDDGGLRCLISAPLDVEWADTDHEVAASA"
misc_feature complement(386279..386614)
/locus_tag="Rleg_6933"
/note="PAS fold; Region: PAS_4; pfam08448"
/db_xref="CDD:117025"
misc_feature complement(385331..386275)
/locus_tag="Rleg_6933"
/note="hypothetical protein; Provisional; Region:
PRK13559"
/db_xref="CDD:172132"
misc_feature complement(385925..386227)
/locus_tag="Rleg_6933"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature complement(order(386012..386014,386027..386029,
386105..386116,386153..386155,386171..386173,
386183..386185))
/locus_tag="Rleg_6933"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature complement(order(385985..385987,385991..385993,
386075..386080,386087..386089,386111..386113,
386123..386125))
/locus_tag="Rleg_6933"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature complement(385640..385879)
/locus_tag="Rleg_6933"
/note="HWE histidine kinase; Region: HWE_HK; pfam07536"
/db_xref="CDD:148894"
gene 386950..388077
/locus_tag="Rleg_6934"
/db_xref="GeneID:8022962"
CDS 386950..388077
/locus_tag="Rleg_6934"
/inference="protein motif:TFAM:TIGR00229"
/note="KEGG: sensory box histidine kinase;
TIGRFAM: PAS sensor protein;
PFAM: histidine kinase dimerisation/phosphoacceptor; PAS
fold-3 domain protein; PAS fold-4 domain protein; PAS fold
domain protein;
SMART: PAS domain containing protein; PAC
repeat-containing protein"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_002984928.1"
/db_xref="GI:241666844"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000700"
/db_xref="InterPro:IPR001610"
/db_xref="InterPro:IPR011495"
/db_xref="InterPro:IPR013655"
/db_xref="InterPro:IPR013656"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:8022962"
/translation="MQDTDRYHKEARRAGDRLIARHVKEDPFAAAFKATRMPMIVTDP
AQHDNPIIFCNAAFEKMTGYSNDELIGRNCRLLQGPETDRRSVGYIRDSVARGQDISV
DILNYRKDGSTFWNALFISPVRDDEGRIIYFFASQLDFTTVKSREAELALARHQAEEA
VARNMAELKSALLAKTLLIHEVDHRVKNNLLTMASIVKLQARFTQDTVKKQTLMSVLN
RVEALSTVQRKLFTLDDIARFDVADFIRELVTDLVSGVGRNDIRLTLDLAPLLVPAVK
ATPLSLIVNELVVDAVNRGLSDGGGAIHVVVKRMHGHFVIRVEDTTTPVEPDAEAAEF
GRLLLEASARQLAANVERKIEGDKIVVEVMLLIDEHQENEN"
misc_feature 386956..388044
/locus_tag="Rleg_6934"
/note="hypothetical protein; Provisional; Region:
PRK13559"
/db_xref="CDD:172132"
misc_feature 387052..387366
/locus_tag="Rleg_6934"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:29035"
misc_feature order(387109..387111,387121..387123,387139..387141,
387178..387189,387265..387267,387280..387282)
/locus_tag="Rleg_6934"
/note="putative active site [active]"
/db_xref="CDD:29035"
misc_feature order(387169..387171,387181..387183,387205..387207,
387214..387219,387301..387303,387307..387309)
/locus_tag="Rleg_6934"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:29035"
misc_feature 387490..387711
/locus_tag="Rleg_6934"
/note="Histidine kinase; Region: HisKA_2; pfam07568"
/db_xref="CDD:203685"
gene 388074..388499
/locus_tag="Rleg_6935"
/db_xref="GeneID:8022963"
CDS 388074..388499
/locus_tag="Rleg_6935"
/inference="protein motif:PFAM:PF00072"
/note="LovR from Caulobacter crescentus is a response
regulator part of a two-component signaling system that
regulates photosensitive bacterial cell-surface and
cell-cell attachment"
/codon_start=1
/transl_table=11
/product="response regulator"
/protein_id="YP_002984929.1"
/db_xref="GI:241666845"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:8022963"
/translation="MKVMIVEDEMLLAMELEIEVEAAGHEVAGIAMNSRQAHDLLAAQ
KPDFAFVDVQLMDGPTGIEVGRSLAAAGIPYVFVTGNIKRLPPDFVDALGAIEKPYTM
NGMKNALNYISAILSGNEGPDIPPNLVLANDSQPQPVNK"
misc_feature 388074..388490
/locus_tag="Rleg_6935"
/note="response regulator; Provisional; Region: PRK13435"
/db_xref="CDD:184052"
misc_feature 388083..388403
/locus_tag="Rleg_6935"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(388092..388097,388227..388229,388254..388256,
388308..388310,388365..388370)
/locus_tag="Rleg_6935"
/note="active site"
/db_xref="CDD:29071"
misc_feature 388227..388229
/locus_tag="Rleg_6935"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(388239..388244,388248..388256)
/locus_tag="Rleg_6935"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 388365..388373
/locus_tag="Rleg_6935"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(388551..389285)
/locus_tag="Rleg_6936"
/db_xref="GeneID:8022964"
CDS complement(388551..389285)
/locus_tag="Rleg_6936"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: hypothetical protein ; K08482 circadian clock
protein KaiC"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984930.1"
/db_xref="GI:241666846"
/db_xref="GeneID:8022964"
/translation="MLQGARGSGKTTAAPRFLRAGVEVAESCVYVALSQTAAELNAIA
LSHGWTLDGIRVEELARPGSVDEADERSIFMTSDLRLNERLPSRNTSPAVSSMTACLK
FGSSLEIRPAAAANLLPSRHTRLRLEDPTYRSQIVGIKKLRKETAMTSTLFDRPLFVK
RGHHIQEVASLEDLFDLLDEWPAERRGMTYEVLVKACRLAAQGIFPLNSLHENVRRYL
IKERALANIDELPLAKEGVLPRSLTS"
misc_feature complement(<389034..389285)
/locus_tag="Rleg_6936"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(order(389253..389261,389271..389276))
/locus_tag="Rleg_6936"
/note="Walker A motif; other site"
/db_xref="CDD:29986"
misc_feature complement(order(389187..389192,389196..389198,
389253..389261,389271..389273))
/locus_tag="Rleg_6936"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29986"
misc_feature complement(388626..388826)
/locus_tag="Rleg_6936"
/note="Protein of unknown function (DUF982); Region:
DUF982; pfam06169"
/db_xref="CDD:191465"
gene 389650..390051
/locus_tag="Rleg_6937"
/db_xref="GeneID:8022965"
CDS 389650..390051
/locus_tag="Rleg_6937"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver;
SMART: response regulator receiver;
KEGG: two-component response regulator protein;
SNP /replace=C"
/codon_start=1
/transl_table=11
/product="response regulator receiver protein"
/protein_id="YP_002984931.1"
/db_xref="GI:241666847"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:8022965"
/translation="MLAAGTESVEVSDIGAAVLVVEDEVLVRLAIVISLEDEGFTVFE
ASDADAAIEILNVHAEIRLMFTDIDMPGSMDGLKLAAAVRDRWPPVKIIVTSGHHDLS
DEVLPVEGRFFSKPYDHSRVVGTVREMVAAV"
misc_feature 389752..390039
/locus_tag="Rleg_6937"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(389848..389850,389875..389877,389935..389937,
389983..389985,389992..389997)
/locus_tag="Rleg_6937"
/note="active site"
/db_xref="CDD:29071"
misc_feature 389848..389850
/locus_tag="Rleg_6937"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(389857..389862,389869..389877)
/locus_tag="Rleg_6937"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 389992..390000
/locus_tag="Rleg_6937"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 390170..390373
/locus_tag="Rleg_6938"
/db_xref="GeneID:8022966"
CDS 390170..390373
/locus_tag="Rleg_6938"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: rec:RHECIAT_CH0002095 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984932.1"
/db_xref="GI:241666848"
/db_xref="GeneID:8022966"
/translation="MRERPIGEAVEDDERAKVIAYHRGDTHAAIDTLLEDIRHLRRQL
ALTEGAMMSRGMARGWRPSYHRD"
gene 390454..390768
/locus_tag="Rleg_6939"
/db_xref="GeneID:8022967"
CDS 390454..390768
/locus_tag="Rleg_6939"
/inference="similar to AA sequence:KEGG:RHE_PF00494"
/note="KEGG: ret:RHE_PF00494 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984933.1"
/db_xref="GI:241666849"
/db_xref="GeneID:8022967"
/translation="MLDRPQPTSVSFETALRDWWSSQPRAFRESVGLSAARACFRAGY
TAGKQTTERRFVFKAGRMRITVWAAGIMEAKKKAEAEADFRAAQKGWPVPKAGWQLQE
ER"
gene 390765..391019
/locus_tag="Rleg_6940"
/db_xref="GeneID:8022968"
CDS 390765..391019
/locus_tag="Rleg_6940"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: ret:RHE_PF00493 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984934.1"
/db_xref="GI:241666850"
/db_xref="GeneID:8022968"
/translation="MSDTDRRPLTEAPRMHVHYCEEKGCAEWGGWGNSPSPAGATRWW
CFEHFPHKSYEQEQALGRKREAAERGDSVQWLLGGSSAHL"
gene complement(391293..391556)
/locus_tag="Rleg_6941"
/db_xref="GeneID:8022969"
CDS complement(391293..391556)
/locus_tag="Rleg_6941"
/inference="protein motif:PFAM:PF06169"
/note="PFAM: protein of unknown function DUF982;
KEGG: rec:RHECIAT_CH0000995 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984935.1"
/db_xref="GI:241666851"
/db_xref="InterPro:IPR010385"
/db_xref="GeneID:8022969"
/translation="MKWHRSGEFSPLMLVVNGPEKYKLVATLWEAANMLTACWPIDDG
EEYLTAIRACRDALHGDVSAEDAREALIRAADEAGIPVITVVH"
misc_feature complement(391305..391532)
/locus_tag="Rleg_6941"
/note="Protein of unknown function (DUF982); Region:
DUF982; pfam06169"
/db_xref="CDD:191465"
gene 392162..392374
/locus_tag="Rleg_6942"
/db_xref="GeneID:8022970"
CDS 392162..392374
/locus_tag="Rleg_6942"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: GF17570 gene product from transcript
GF17570-RA"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984936.1"
/db_xref="GI:241666852"
/db_xref="GeneID:8022970"
/translation="MSVPNEPIVPPPAPPIGNPEPERDPGETPPPVGPEPDDGNDPMT
QAHAQEAQRRPTWGLLCRGVQVHAAD"
gene 393322..393534
/locus_tag="Rleg_6943"
/db_xref="GeneID:8022971"
CDS 393322..393534
/locus_tag="Rleg_6943"
/inference="similar to AA sequence:KEGG:RHECIAT_PC0000299"
/note="KEGG: rec:RHECIAT_PC0000299 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984937.1"
/db_xref="GI:241666853"
/db_xref="GeneID:8022971"
/translation="MSKTTNGLNDRPKDSTIAQSGPGLPDDSGQPIEATNQEVERVRA
KFEGDARKKLQAEIDEQVEKPQRGTA"
gene 393543..393785
/locus_tag="Rleg_6944"
/db_xref="GeneID:8022972"
CDS 393543..393785
/locus_tag="Rleg_6944"
/inference="similar to AA sequence:KEGG:msr1747"
/note="KEGG: mlo:msr1747 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984938.1"
/db_xref="GI:241666854"
/db_xref="GeneID:8022972"
/translation="MPGAFTSISIFAFDLDDSGQPVRAWETVFHGEEAGAVEEAREAA
RTHAGALVVKREGHPAVGEVGDPVILFQTGKIGDFN"
gene complement(393999..394806)
/locus_tag="Rleg_6945"
/pseudo
/db_xref="GeneID:8022973"
gene complement(394810..394986)
/locus_tag="Rleg_6946"
/db_xref="GeneID:8022974"
CDS complement(394810..394986)
/locus_tag="Rleg_6946"
/inference="similar to AA sequence:KEGG:RHECIAT_CH0003322"
/note="KEGG: rec:RHECIAT_CH0003322 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984939.1"
/db_xref="GI:241666855"
/db_xref="GeneID:8022974"
/translation="MATTSRGRAQDRAKVAGGQDHEVRYEAKKEGVPKETVNRAVKKA
GNSRKKVEAEIGRH"
misc_feature complement(394819..394986)
/locus_tag="Rleg_6946"
/note="Protein of unknown function (DUF3606); Region:
DUF3606; pfam12244"
/db_xref="CDD:204862"
gene complement(395280..396002)
/locus_tag="Rleg_6947"
/db_xref="GeneID:8022975"
CDS complement(395280..396002)
/locus_tag="Rleg_6947"
/inference="similar to AA sequence:KEGG:Smed_5629"
/note="KEGG: smd:Smed_5629 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984940.1"
/db_xref="GI:241666856"
/db_xref="GeneID:8022975"
/translation="MRLGRNSRGGWRSAAGVLAAVLLAYLLVCYLVMPELWIFRDRST
VADFSRMVTTTGDDIPGDPINVGLVGPKQQVIRAFAASGWDPADRVTLLSSVEIGLSV
VLDRPDLDAPVSPLFFDGRKQDLAFEKPVGRSADERHHIRLWQTATVGADGQPLWLGS
ASFDRGVGVSHDTGQITHHIGPDLDAERELVIGDLKGAGQISMTYERAGVGATKDGRN
GGGDPYFTDGRILVGVLPDIGR"
misc_feature complement(395313..395852)
/locus_tag="Rleg_6947"
/note="LssY C-terminus; Region: LssY_C; pfam14067"
/db_xref="CDD:206237"
gene complement(396023..396709)
/locus_tag="Rleg_6948"
/db_xref="GeneID:8022976"
CDS complement(396023..396709)
/locus_tag="Rleg_6948"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: azc:AZC_3686 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984941.1"
/db_xref="GI:241666857"
/db_xref="GeneID:8022976"
/translation="MKRHIRIGTVAVACLVSCAGAALAEDAITAPASKTIGATAAGKM
VPSLAVLNSGGATLADGKLTMTGVTPNSIVFADRPVRSAGHVLTTEFIKEWDEGKDSF
AVDPPNATISVMSSDGTAVEDAVVVLTKPKLDGGTLTFDVQVLEGELAKANGPASLFI
DMFVARAGMGRVGVVGVGAVGFHGGWYAHPAARYGAAVATGAAIGAAAASAPYYYHPP
CGYYPYPPCY"
sig_peptide complement(396635..396709)
/locus_tag="Rleg_6948"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.998 at
residue 25"
gene complement(396728..397297)
/locus_tag="Rleg_6949"
/db_xref="GeneID:8022977"
CDS complement(396728..397297)
/locus_tag="Rleg_6949"
/inference="protein motif:PFAM:PF00691"
/note="PFAM: OmpA/MotB domain protein;
KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="OmpA/MotB domain protein"
/protein_id="YP_002984942.1"
/db_xref="GI:241666858"
/db_xref="InterPro:IPR006664"
/db_xref="InterPro:IPR006665"
/db_xref="GeneID:8022977"
/translation="MKSFRLATMFAAGLLLAPGHPFAQELSGPQVVRTLDRLQGGAPA
IDLALLMEEAAASAGKGLAGLPDWQKLSKLSQLIVEIDFENDSIAIEPKSYRTVGMIA
DALHHPNLRRYKFLVVGHTSSTGDAKHNLDLSQKRANAITEALSTTFSIAPDRLFAIG
VGEEWPGDPSNPQAADNRRVQLVNLGLVK"
sig_peptide complement(397226..397297)
/locus_tag="Rleg_6949"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.999 at
residue 24"
misc_feature complement(396749..>397069)
/locus_tag="Rleg_6949"
/note="Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Cell envelope
biogenesis, outer membrane]; Region: OmpA; COG2885"
/db_xref="CDD:32711"
misc_feature complement(396749..397066)
/locus_tag="Rleg_6949"
/note="Peptidoglycan binding domains similar to the
C-terminal domain of outer-membrane protein OmpA; Region:
OmpA_C-like; cd07185"
/db_xref="CDD:143586"
misc_feature complement(order(396764..396766,396899..396901,
396908..396913,396923..396925,396932..396937,
397040..397045))
/locus_tag="Rleg_6949"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:143586"
gene complement(397322..397918)
/locus_tag="Rleg_6950"
/db_xref="GeneID:8022978"
CDS complement(397322..397918)
/locus_tag="Rleg_6950"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: cysteine rich repeat protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984943.1"
/db_xref="GI:241666859"
/db_xref="GeneID:8022978"
/translation="MDRQNGAGSFHIRRCGDTLKAVSYGPCNRNILPFSPPKAHQMRA
GEFLRRSIVHDGGSMSTRTRLLGGALVAFLALSGAARADTISFADAVSTLANDCGSDI
KKFCKGLNLGSGRIQNCLETHAAKVSPTCTATLASVTSSIGQRLAAQSSFTTICKHYV
AQFCSGVVGEGNILSCLNKATRVNEGQCGQAITDAGWR"
misc_feature complement(397535..>397642)
/locus_tag="Rleg_6950"
/note="Cysteine rich repeat; Region: Cys_rich_FGFR;
pfam00839"
/db_xref="CDD:201466"
gene complement(397893..398162)
/locus_tag="Rleg_6951"
/db_xref="GeneID:8022979"
CDS complement(397893..398162)
/locus_tag="Rleg_6951"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984944.1"
/db_xref="GI:241666860"
/db_xref="GeneID:8022979"
/translation="MGAGHVAVSQRLRGASALLRQRVSFFFGGALFSAIFFRHLPELD
ALPPFAQACVKSVYVAATLFGLFCYSLELARFGQAVEDGPPERGR"
gene complement(398534..400046)
/locus_tag="Rleg_6952"
/pseudo
/db_xref="GeneID:8022980"
gene 400102..400218
/locus_tag="Rleg_6953"
/pseudo
/db_xref="GeneID:8022981"
gene complement(400254..400592)
/locus_tag="Rleg_6954"
/db_xref="GeneID:8022982"
CDS complement(400254..400592)
/locus_tag="Rleg_6954"
/inference="similar to AA sequence:KEGG:AGR_C_1859"
/note="KEGG: atc:AGR_C_1859 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984945.1"
/db_xref="GI:241666861"
/db_xref="GeneID:8022982"
/translation="MKPILVSVAALLMSTGLASAAEPIVGNWKTTLGDTAAIEPCGGG
FCITLKSGKHTGKKIGAFEGNGGSYSGRITDPDANKTYDGTISVSGDTVTLKGCVMKV
VCESQKWSRQ"
sig_peptide complement(400530..400592)
/locus_tag="Rleg_6954"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.994 at
residue 21"
misc_feature complement(400257..>400586)
/locus_tag="Rleg_6954"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4731"
/db_xref="CDD:34346"
gene 400782..401048
/locus_tag="Rleg_6955"
/db_xref="GeneID:8022983"
CDS 400782..401048
/locus_tag="Rleg_6955"
/inference="similar to AA sequence:KEGG:Smed_4883"
/note="KEGG: smd:Smed_4883 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984946.1"
/db_xref="GI:241666862"
/db_xref="GeneID:8022983"
/translation="MQYDTEFAKRRFPEQALEIEALASRNESFRELCHDFSIADQLVR
DWESSTAPGQHERYAEALELMDWLGKEIHTMLDLAKVVPFPAAR"
gene 401100..402116
/locus_tag="Rleg_6956"
/db_xref="GeneID:8022984"
CDS 401100..402116
/locus_tag="Rleg_6956"
/inference="similar to AA sequence:KEGG:RD1_A0006"
/note="KEGG: rde:RD1_A0006 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984947.1"
/db_xref="GI:241666863"
/db_xref="GeneID:8022984"
/translation="MPRLMAIILIFAVALIVAALTAWGSLAFWYRLPLPDAGRAIGAC
VFLAFGLLTVAALANRLRRRAILSFAVAFALVLFWWSSIKPEANAAWAPDVARQVTGR
IDGNSLTLTDVRDFEWRSNSDFTERWTTRTYDVSKVRTVDLFMSYWAGPKIAHVIFSF
GFEGGEQLAWSIEVRHKVGGGFSPLADLFKNDPLVVVAADERDVVGVRSNVRGEDVQI
YRLRASPEQARNLLLEYVAEANALARTPRFYNSITTNCTTTVAKLMRVAGDKVPFDWR
LIVNGYLPDYAYDRGAVDTSMPLDRLREIAKIDVRARADGLSPDFSKAIRLGVPFPVV
VAGP"
sig_peptide 401100..401174
/locus_tag="Rleg_6956"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.335 at
residue 25;
SNP /replace=G"
misc_feature 401466..401969
/locus_tag="Rleg_6956"
/note="Domain of unknown function (DUF4105); Region:
DUF4105; pfam13387"
/db_xref="CDD:205565"
gene 402217..403494
/locus_tag="Rleg_6957"
/db_xref="GeneID:8022985"
CDS 402217..403494
/locus_tag="Rleg_6957"
/inference="protein motif:PFAM:PF05990"
/note="PFAM: protein of unknown function DUF900 hydrolase
family protein;
KEGG: sme:SMa0599 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984948.1"
/db_xref="GI:241666864"
/db_xref="InterPro:IPR010297"
/db_xref="GeneID:8022985"
/translation="MTAGPIRRLLPCLALVVLAGCGGHPKNVLFPVADTVPDTSRVDM
LVATTRARSTVSGEMFTGERARTPSFAQMRVSLPKVRNEGDVAWPKRLPSNPKTDFAT
LKADALSLEAAKGWLNASVRRNRDHSVLVFIHGFNNRFEDSVYRFAQIVHDSNVRSTP
VLVTWPSRGSLLAYGYDRESTNYTRNALETLFQYLAKDGTVKEVNVLAHSMGNWLALE
ALRQMAIRNGGLPAKFKNVMLAAPDVDVDVFRSQIEDMGDPHPQFTLFVSRDDKALAF
SRRVWGNIPRLGSIDPETAPYKTELADYKVSVIDLTKIKVSDDLNHSKFAESPQVVQL
IGQRLSEGQTLTDSRVGLGDTILAGTTNVAAAAGSAAGLVLTAPVAVLDADTRSNYAN
HVGGLTGQDGGTQKIAVKNCAATPADPACRKQR"
misc_feature 402262..403383
/locus_tag="Rleg_6957"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4782"
/db_xref="CDD:34393"
gene 403724..405526
/locus_tag="Rleg_6958"
/db_xref="GeneID:8022986"
CDS 403724..405526
/locus_tag="Rleg_6958"
/inference="similar to AA sequence:KEGG:Smed_4881"
/note="KEGG: smd:Smed_4881 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984949.1"
/db_xref="GI:241666865"
/db_xref="InterPro:IPR013026"
/db_xref="GeneID:8022986"
/translation="MQTSVPLPDDRAERPCPTHEEVRAQLERILSSGEFPSAGRGAAF
LKYVTEETLAGRAPRLKAYSIAIEVFNRSAGFSQEDPVVRIEAGRLRRVIERYYLVAG
QRDPIRIDIPKGGYVPTFTWNGAPMEAAGDALKEDVSERRAFAWRRLAWPVLAVLVAF
VFAGLGFYAGVLKGPAPGRSAEQLPGEPTLVIAPFADLGDGPQAARYAAGLTEELLTA
LPRFKEITVFGRETSKALPPGVEASQVREGLGARYLVAGGVRVAGDKVRVTVRLVDTS
DGSILWSQDYDENLDTHELFFIQADVASKVATAIAQPYGIIAKSIAANPPPDDMSVHD
CTLRYYAYREELNPEKHQVARDCLQNAVALFPAYATAWSMLSIIQLDEGRFEFNPQSD
KGPAMERALSSARRAVSLEPDNTRALQALMTALFFNNETKEAFDVGEAALAANPNDTE
FLGELGTRVAFSGQWKRGGELLDRAIKLNPGGSGYYFGTRALIACMLDDHEMAVRLIR
KADLQKFPLFHGVAAVIYSEAGLLAEAKHEGEVFMKMRPDYLPNIVAENRKRNLPPKD
SMRMIAALRRAGLPVPSATDIEAEFRVSDASYRP"
misc_feature 404249..404671
/locus_tag="Rleg_6958"
/note="TolB amino-terminal domain; Region: TolB_N;
cl00639"
/db_xref="CDD:207145"
misc_feature 404768..405064
/locus_tag="Rleg_6958"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(404783..404785,404795..404797,404804..404806,
404849..404851,404921..404923,404933..404935,
404942..404944,404987..404989,405023..405025,
405035..405037,405044..405046)
/locus_tag="Rleg_6958"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature order(404840..404845,404849..404854,404861..404866,
404978..404983,404990..404995,405002..405007)
/locus_tag="Rleg_6958"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 404972..405253
/locus_tag="Rleg_6958"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(404972..404974,404978..404983,404990..404995,
405080..405085,405089..405094,405101..405106,
405182..405187,405197..405202,405209..405214)
/locus_tag="Rleg_6958"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature order(404987..404989,405023..405025,405035..405037,
405044..405046,405089..405091,405125..405127,
405137..405139,405146..405148,405194..405196,
405230..405232,405242..405244,405251..405253)
/locus_tag="Rleg_6958"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene 405638..406015
/locus_tag="Rleg_6959"
/db_xref="GeneID:8022987"
CDS 405638..406015
/locus_tag="Rleg_6959"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: smd:Smed_5626 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984950.1"
/db_xref="GI:241666866"
/db_xref="GeneID:8022987"
/translation="MANAASTRALPAKRSLTLAVAAALGVGAPVYGQGSCTDLAKNLS
NPIASLIRKLVKVNEQPISLTGELRNWAASPDDGPEGHGVQVGLTVPVSEVGAYLLMV
RTRSALFARCPRPHDATLSPQRA"
sig_peptide 405638..405736
/locus_tag="Rleg_6959"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.965) with cleavage site probability 0.937 at
residue 33;
SNP /replace=A"
gene 406046..407488
/locus_tag="Rleg_6960"
/db_xref="GeneID:8022988"
CDS 406046..407488
/locus_tag="Rleg_6960"
/inference="protein motif:PFAM:PF06863"
/note="PFAM: protein of unknown function DUF1254; protein
of unknown function DUF1214;
KEGG: smd:Smed_4882 protein of unknown function DUF1214"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984951.1"
/db_xref="GI:241666867"
/db_xref="InterPro:IPR006311"
/db_xref="InterPro:IPR010621"
/db_xref="InterPro:IPR010679"
/db_xref="GeneID:8022988"
/translation="MLTKRDLLRSAAMAALVAATAKSTPVLAQNKEEWPSLLEAKDIA
EEGFIYGLPLVMNYAVMNEFAVDRNSGQFKAPFNDINNMHQVASPADTAIITPNSDTP
YSILWLDLRAEPMVISVPTVEKERYYSVQLIDGNTYNFGYIGSRTTGTEPGSYLVVGP
DWKGAKPDGVKQVFTSSTPFVFANFRTQLIDADDMANVEKVQTGYKAQPLSAFLKQPA
PPAAPTIEFLPATTAGIKKNFFEYLDVALQFVPETSRDKVIRAKLARIGIGPGKTLEF
KDLPLEHKAELLVGMKQGDDKIDKWLASGNKPINGWNVSSLLGDEAFYNGDWLLRSGA
AKAGLYGNDAAEAMYPFTRTDASGKPLDGSKHKYTITFPPGQLPPVHSFWSVTMYDGK
SQLLVKNPINRYLVNSPMLPGMKKDADGSLTLHIQKDSPGADKEANWLPAPDGTIYLV
MRLYWPKTEAPSILPAGKGTWQPPGVKRVS"
sig_peptide 406046..406132
/locus_tag="Rleg_6960"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.944 at
residue 29"
misc_feature 406175..407485
/locus_tag="Rleg_6960"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG5361"
/db_xref="CDD:34931"
misc_feature 406277..406663
/locus_tag="Rleg_6960"
/note="Protein of unknown function (DUF1254); Region:
DUF1254; pfam06863"
/db_xref="CDD:203538"
misc_feature 406970..407419
/locus_tag="Rleg_6960"
/note="Protein of unknown function (DUF1214); Region:
DUF1214; cl08447"
/db_xref="CDD:208937"
gene 407686..407772
/locus_tag="Rleg_6961"
/pseudo
/db_xref="GeneID:8022989"
gene complement(407990..408691)
/locus_tag="Rleg_6962"
/db_xref="GeneID:8022990"
CDS complement(407990..408691)
/locus_tag="Rleg_6962"
/inference="protein motif:PFAM:PF01925"
/note="PFAM: protein of unknown function DUF81;
KEGG: rec:RHECIAT_PC0000140 hypothetical conserved
membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984952.1"
/db_xref="GI:241666868"
/db_xref="InterPro:IPR002781"
/db_xref="GeneID:8022990"
/translation="MNALAGGGSFVSLPALISVGVPSVSANATSTLALFPGGMASSWV
YRDGVRSVCGVKVMPIAIVTVMGGVAGSILLLLTPSRIFDGILPWLLLVATLMLAAGP
RLSAHLQTRARPSILAFATVQFFLGLYGGYFGGAVGLMMLAAWSALGGGDIKSLNPTR
MVMVTAANAVAVVVFVLAGAIVWQECIPMTIGAVIGGWIGAHIGRRLPSPVVRMLTLA
VAFLTTAVFFSRAYL"
misc_feature complement(<408326..408691)
/locus_tag="Rleg_6962"
/note="Predicted permeases [General function prediction
only]; Region: COG0730; cl00498"
/db_xref="CDD:186038"
sig_peptide complement(408605..408691)
/locus_tag="Rleg_6962"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.980) with cleavage site probability 0.609 at
residue 29"
misc_feature complement(408011..408676)
/locus_tag="Rleg_6962"
/note="Sulfite exporter TauE/SafE; Region: TauE;
pfam01925"
/db_xref="CDD:202049"
gene complement(408889..409203)
/locus_tag="Rleg_6963"
/db_xref="GeneID:8022991"
CDS complement(408889..409203)
/locus_tag="Rleg_6963"
/inference="similar to AA sequence:KEGG:Arad_3451"
/note="KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984953.1"
/db_xref="GI:241666869"
/db_xref="GeneID:8022991"
/translation="MRVAVILFIAVCLFLAGATASRAYVGNSNFWLLATALVLYTLGN
LSMIALMRTSGLSLAISLSSVAQLIAINAIAVLVFDERLGWHQAVGVLLGIASVTLMV
IG"
sig_peptide complement(409132..409203)
/locus_tag="Rleg_6963"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.890 at
residue 24;
SNP /replace=G"
gene complement(409558..409812)
/locus_tag="Rleg_6964"
/db_xref="GeneID:8022992"
CDS complement(409558..409812)
/locus_tag="Rleg_6964"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: rec:RHECIAT_PB0000068 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984954.1"
/db_xref="GI:241666870"
/db_xref="GeneID:8022992"
/translation="MSAPHEDHSEALQDGEAILLNAVLMWFRFYGVPFDERTADVLCE
RAMLLYAEGRGQRYIEGDLIRTFSGLMAMRVNAPSSALSH"
gene 409889..410782
/locus_tag="Rleg_6965"
/db_xref="GeneID:8022993"
CDS 409889..410782
/locus_tag="Rleg_6965"
/inference="protein motif:TFAM:TIGR02772"
/note="KEGG: Ku protein ; K10979 DNA end-binding protein
Ku;
TIGRFAM: Ku protein;
PFAM: Ku domain protein;
SMART: Ku domain protein"
/codon_start=1
/transl_table=11
/product="Ku protein"
/protein_id="YP_002984955.1"
/db_xref="GI:241666871"
/db_xref="InterPro:IPR006164"
/db_xref="InterPro:IPR009187"
/db_xref="GeneID:8022993"
/translation="MAAHRAQWKGHIKVGEITCGVGLYTAASTSDRISFRTINKATGN
PVRREFVDSETEETVERENQVKGFEVENGEYIMIDPEEVTAVIPDSDKMLEIEAFLPC
FEVDDVYFDKPYYLVPTDEVSEDAFAGLRDALSKASVTAIARTVLFRRMRTVLIRAHG
RGLIATTLNFDYEVRPSKEAFKEVPEIKVEGEMLDLAKHIIGTKKGDFDPATFDDRYE
AALADLVKAKSEGRSLPKPKPVQVSKPNDLLKALRESAGMGNAKPAAKSKTKAANANA
KKKTKAAAPKTAAKTTHKKAS"
misc_feature 409895..410668
/locus_tag="Rleg_6965"
/note="Ku-homolog [Replication, recombination, and
repair]; Region: COG1273"
/db_xref="CDD:31464"
misc_feature 409901..410665
/locus_tag="Rleg_6965"
/note="Ku-core domain, Ku-like subfamily; composed of
prokaryotic homologs of the eukaryotic DNA binding protein
Ku. The alignment includes the core domain shared by the
prokaryotic YkoV-like proteins and the eukaryotic Ku70 and
Ku80. The prokaryotic Ku...; Region: KU_like; cd00789"
/db_xref="CDD:63881"
misc_feature order(409904..409906,409961..409963,409991..409993,
410036..410038,410330..410332)
/locus_tag="Rleg_6965"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:63881"
misc_feature order(409940..409942,409961..409966,409970..409978,
409991..410002,410015..410017,410024..410035,
410039..410047,410063..410065,410075..410083,
410087..410089,410093..410098,410108..410113,
410120..410122,410177..410179,410183..410188,
410216..410218,410261..410263,410318..410320,
410399..410407,410411..410413,410498..410500,
410510..410512,410525..410533,410570..410572,
410645..410647,410654..410656)
/locus_tag="Rleg_6965"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:63881"
gene 410792..411619
/locus_tag="Rleg_6966"
/db_xref="GeneID:8022994"
CDS 410792..411619
/locus_tag="Rleg_6966"
/inference="protein motif:TFAM:TIGR02772"
/note="KEGG: Ku protein;
TIGRFAM: Ku protein;
PFAM: Ku domain protein;
SMART: Ku domain protein"
/codon_start=1
/transl_table=11
/product="Ku protein"
/protein_id="YP_002984956.1"
/db_xref="GI:241666872"
/db_xref="InterPro:IPR006164"
/db_xref="InterPro:IPR009187"
/db_xref="GeneID:8022994"
/translation="MAPRPYWKGYLKLSLVTCPVAMSPATSESEKVRFHTLNKETGNR
VLSRYVDSVTGKPVKDENEAKGYERGENDYVLLTDEDLESIDLETVRTIDIEKFVPRE
SIEWIYLETPHYLVPNDKIGNEAFAVIRDAMKAEKVLGVSRVVIGRRERAVVLEPRDE
GIVVWTLRFGDEVRPEEEYFQGIEKKADTSTVAAITQTIKRRMDKWSPSMVSDPIQES
LLKLIATKKKALKPSKSSKAANSKKDDDAKPSNVISIMDALKKSVEADLKGRKKAGR"
misc_feature 410792..411616
/locus_tag="Rleg_6966"
/note="Ku-homolog [Replication, recombination, and
repair]; Region: COG1273"
/db_xref="CDD:31464"
sig_peptide 410792..410875
/locus_tag="Rleg_6966"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.853) with cleavage site probability 0.773 at
residue 28"
misc_feature 410801..411586
/locus_tag="Rleg_6966"
/note="Ku-core domain; includes the central DNA-binding
beta-barrels, polypeptide rings, and the C-terminal arm of
Ku proteins. The Ku protein consists of two tightly
associated homologous subunits, Ku70 and Ku80, and was
originally identified as an autoantigen...; Region: KU;
cl02666"
/db_xref="CDD:194406"
misc_feature order(410804..410806,410861..410863,410891..410893,
410936..410938,411230..411232)
/locus_tag="Rleg_6966"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:63879"
misc_feature order(410840..410842,410861..410869,410873..410878,
410891..410902,410915..410917,410924..410935,
410939..410947,410963..410965,410975..410983,
410987..410989,410993..410998,411008..411013,
411020..411022,411077..411079,411083..411088,
411116..411118,411161..411163,411218..411220,
411299..411307,411311..411313,411395..411397,
411407..411409,411422..411430,411488..411490,
411569..411571,411578..411580)
/locus_tag="Rleg_6966"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:63879"
gene 411648..412244
/locus_tag="Rleg_6967"
/db_xref="GeneID:8022995"
CDS 411648..412244
/locus_tag="Rleg_6967"
/inference="protein motif:PFAM:PF02586"
/note="PFAM: protein of unknown function DUF159;
KEGG: msl:Msil_3101 protein of unknown function DUF159"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984957.1"
/db_xref="GI:241666873"
/db_xref="InterPro:IPR003738"
/db_xref="GeneID:8022995"
/translation="MCNDYEQHIRWKEYCEMMQSLALRIPAHQSELDLPTADDIKIGD
IAPVVRTSGDEFELFAAKFGFPPSAGRKGGPVFNFVSENRDFSESKRCLIPASAFFEF
TGTKYPKAKHRFTLADRAIFAIAGLWREGEGNQPASMTMLTTKPSPDVAPIHNRQVVI
LKPEDWRHWLALSKPQDQLLKPLPAGSLSVEQVRAGSD"
misc_feature 411708..412196
/locus_tag="Rleg_6967"
/note="Uncharacterized ACR, COG2135; Region: DUF159;
pfam02586"
/db_xref="CDD:202296"
gene complement(412511..412585)
/locus_tag="Rleg_6968"
/pseudo
/db_xref="GeneID:8022996"
gene complement(412785..413054)
/locus_tag="Rleg_6969"
/db_xref="GeneID:8022997"
CDS complement(412785..413054)
/locus_tag="Rleg_6969"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984958.1"
/db_xref="GI:241666874"
/db_xref="GeneID:8022997"
/translation="MLMDNGNNVSLNEIGILGSAAKVSQSNFITTYPVDQKPSTIWRP
MRQAEAWELCESQPIWGKSPTMMAGFVAMGFPSQQSDGFKAAASL"
gene 413407..413655
/locus_tag="Rleg_6970"
/db_xref="GeneID:8022998"
CDS 413407..413655
/locus_tag="Rleg_6970"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984959.1"
/db_xref="GI:241666875"
/db_xref="GeneID:8022998"
/translation="MFVKLTDGTITRWINMDAVIQMRFDEDKHQTELFLVRENARLVF
VDQSPEEIRTLLDVELERLSQITNWTTGGPIGKSNGCR"
gene complement(414251..414382)
/locus_tag="Rleg_6971"
/pseudo
/db_xref="GeneID:8022999"
gene 414481..414807
/locus_tag="Rleg_6972"
/db_xref="GeneID:8023000"
CDS 414481..414807
/locus_tag="Rleg_6972"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984960.1"
/db_xref="GI:241666876"
/db_xref="GeneID:8023000"
/translation="MKAITVSGLIMLAFASGAYAATMTAEQLKSELVGHPIHWKSKTQ
SGVTTYKPDGTIEATVDGDKATYKGTWSIKDNKMCEKFGKEKCATINSLGGKKYSKGG
GTFTVE"
sig_peptide 414481..414543
/locus_tag="Rleg_6972"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.999 at
residue 21"
gene 415672..416368
/locus_tag="Rleg_6973"
/pseudo
/db_xref="GeneID:8023001"
gene 416388..416597
/locus_tag="Rleg_6974"
/db_xref="GeneID:8023002"
CDS 416388..416597
/locus_tag="Rleg_6974"
/inference="similar to AA sequence:KEGG:RHECIAT_CH0002698"
/note="KEGG: rec:RHECIAT_CH0002698 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984961.1"
/db_xref="GI:241666877"
/db_xref="GeneID:8023002"
/translation="MFQALTSLSDHDIETVVDAVTEWCSQHHCDIQSCRGQFALAAAV
DALQSSPNHDALVHHLSEKLMDNKE"
gene 417053..417298
/locus_tag="Rleg_6975"
/db_xref="GeneID:8023003"
CDS 417053..417298
/locus_tag="Rleg_6975"
/inference="protein motif:PFAM:PF04365"
/note="PFAM: protein of unknown function DUF497;
KEGG: btr:Btr_0515 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984962.1"
/db_xref="GI:241666878"
/db_xref="InterPro:IPR007460"
/db_xref="GeneID:8023003"
/translation="MKITYDEAKRRTNIEKHGLDFADLDLLFFAGSVVVPAKGERLMA
IGVFRDGVIAVVFVTLGSEAISVISMRKASRKERSIL"
misc_feature 417053..417295
/locus_tag="Rleg_6975"
/note="Protein of unknown function (DUF497); Region:
DUF497; cl01108"
/db_xref="CDD:154200"
gene 417295..417609
/locus_tag="Rleg_6976"
/db_xref="GeneID:8023004"
CDS 417295..417609
/locus_tag="Rleg_6976"
/inference="similar to AA sequence:KEGG:Oant_0615"
/note="KEGG: oan:Oant_0615 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984963.1"
/db_xref="GI:241666879"
/db_xref="GeneID:8023004"
/translation="MTRIADSVLKISDAEEAKIQRQIASDPDAPEATDEQLAKAKPFA
EALPELAESIRKNLGGRPKSNNPKVAVSIRLDPEVVDAFKAKGEGWQSRINETLRKAV
GL"
misc_feature 417376..417600
/locus_tag="Rleg_6976"
/note="Domain of unknown function (DUF4415); Region:
DUF4415; pfam14384"
/db_xref="CDD:206552"
gene complement(418407..418793)
/locus_tag="Rleg_6977"
/db_xref="GeneID:8023005"
CDS complement(418407..418793)
/locus_tag="Rleg_6977"
/inference="protein motif:PFAM:PF06170"
/note="PFAM: protein of unknown function DUF983;
KEGG: mes:Meso_2074 protein of unknown function DUF983"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984964.1"
/db_xref="GI:241666880"
/db_xref="InterPro:IPR009325"
/db_xref="GeneID:8023005"
/translation="MKTEYDETTVPALTGIKGRCPRCQRGHLFNGLLSLAPACEVCGL
DYSFADPADGPAFFAMSIVAVPALAFALWLQFTFDVHLWVHLVLTVPLTGLACILLLR
PLKGWLVCSQYFHKAEEGRIDREWGK"
misc_feature complement(418428..418763)
/locus_tag="Rleg_6977"
/note="Protein of unknown function (DUF983); Region:
DUF983; cl02211"
/db_xref="CDD:186519"
gene 419315..420289
/locus_tag="Rleg_6978"
/db_xref="GeneID:8023006"
CDS 419315..420289
/locus_tag="Rleg_6978"
/inference="protein motif:PFAM:PF02492"
/note="PFAM: cobalamin synthesis protein P47K; cobalamin
synthesis CobW domain protein;
KEGG: azc:AZC_3800 putative cobalamin synthesis protein"
/codon_start=1
/transl_table=11
/product="cobalamin synthesis protein P47K"
/protein_id="YP_002984965.1"
/db_xref="GI:241666881"
/db_xref="InterPro:IPR003495"
/db_xref="InterPro:IPR011629"
/db_xref="GeneID:8023006"
/translation="MSKLKTTILTGFLGAGKTTLLNRILSFESSERVAVIVNEYGEVG
IDGQLVVQTNDQIVELNNGCICCTVRDDLIAAIRALLQSGRQIDRFIIETSGLADPAP
VIQSFILDDVLSARLELDAIVTVVDARHIEGQLAQEEAVEQISFADVLLLNKVDLVDE
DHLLQVERDLRRRNPLARIIPTKDCGVAFEDVVGIGAFDLKNVLEIDPQILEEQEHEH
DQTIGCVAFREPEPLDPVALNSWLTRLVQDIGADLFRMKGVLSFAGEARRYVLHGIHM
TLEGRPGKVWQPSEIRSSDIVFIGRNLDEEMLRAGFERCIVPRQALAS"
misc_feature 419324..420259
/locus_tag="Rleg_6978"
/note="Putative GTPases (G3E family) [General function
prediction only]; Region: COG0523"
/db_xref="CDD:30869"
misc_feature 419333..419755
/locus_tag="Rleg_6978"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:214148"
misc_feature 419978..420259
/locus_tag="Rleg_6978"
/note="Cobalamin synthesis protein cobW C-terminal domain;
Region: CobW_C; pfam07683"
/db_xref="CDD:203723"
gene 420323..420820
/locus_tag="Rleg_6979"
/db_xref="GeneID:8023007"
CDS 420323..420820
/locus_tag="Rleg_6979"
/inference="similar to AA sequence:KEGG:AZC_3799"
/note="KEGG: azc:AZC_3799 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_002984966.1"
/db_xref="GI:241666882"
/db_xref="GeneID:8023007"
/translation="MPPLVAAMISLGVLGAIDTYITATVFPVPVWVTFIAWASFYACG
GGQHGLVKSIVSNWTGIIIASLTLLVIQYGPQHPIFVALLVGLGTSAMVMVSSIKILN
FPPAIVFGFASLVGTTAATN 