LOCUS NC_013131 10467782 bp DNA circular CON 10-JUN-2013
DEFINITION Catenulispora acidiphila DSM 44928 chromosome, complete genome.
ACCESSION NC_013131
VERSION NC_013131.1 GI:256389232
DBLINK Project: 59077
BioProject: PRJNA59077
KEYWORDS .
SOURCE Catenulispora acidiphila DSM 44928
ORGANISM Catenulispora acidiphila DSM 44928
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
Catenulisporineae; Catenulisporaceae; Catenulispora.
REFERENCE 1 (bases 1 to 10467782)
AUTHORS Copeland,A., Lapidus,A., Glavina Del Rio,T., Nolan,M., Lucas,S.,
Chen,F., Tice,H., Cheng,J.F., Bruce,D., Goodwin,L., Pitluck,S.,
Mikhailova,N., Pati,A., Ivanova,N., Mavromatis,K., Chen,A.,
Palaniappan,K., Chain,P., Land,M., Hauser,L., Chang,Y.J.,
Jeffries,C.D., Chertkov,O., Brettin,T., Detter,J.C., Han,C.,
Ali,Z., Tindall,B.J., Goker,M., Bristow,J., Eisen,J.A.,
Markowitz,V., Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P.
TITLE Complete genome sequence of Catenulispora acidiphila type strain
(ID 139908)
JOURNAL Stand Genomic Sci 1 (2), 119-125 (2009)
PUBMED 21304647
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 10467782)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (21-AUG-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 10467782)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Klenk,H.-P. and
Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to CP001700.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4082785
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##Metadata-START##
Organism Display Name :: Catenulispora acidiphila ID139908, DSM
44928
Culture Collection ID :: DSM 44928, NRRL B-24433, JCM 14897
GOLD Stamp ID :: Gi02233
Funding Program :: DOE-GEBA 2007
Gene Calling Method :: Prodigal
Isolation Site :: Forest soil from Gerenzano Italy
Collection Date :: before 2006
Isolation Country :: Italy
Oxygen Requirement :: Aerobe
cell Shape :: Filament-shaped
Motility :: Nonmotile
sporulation :: Sporulating
Temperature Range :: Mesophile
Temperature Optimum :: 22 - 28C
pH :: 6
Gram Staining :: gram+
Biotic Relationship :: Free living
Diseases :: None
Habitat :: Soil
Phenotypes :: acidophile
##Metadata-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..10467782
/organism="Catenulispora acidiphila DSM 44928"
/mol_type="genomic DNA"
/strain="DSM 44928"
/db_xref="taxon:479433"
gene 370..2082
/locus_tag="Caci_0001"
/db_xref="GeneID:8340452"
CDS 370..2082
/locus_tag="Caci_0001"
/inference="protein motif:TFAM:TIGR00362"
/note="KEGG: fra:Francci3_0001 chromosomal replication
initiator protein DnaA;
TIGRFAM: chromosomal replication initiator protein DnaA;
PFAM: Chromosomal replication initiator DnaA; Chromosomal
replication initiator DnaA domain;
SMART: replication initiation factor DnaA; ATPase AAA"
/codon_start=1
/transl_table=11
/product="chromosomal replication initiator protein DnaA"
/protein_id="YP_003110797.1"
/db_xref="GI:256389233"
/db_xref="InterPro:IPR001957"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR013159"
/db_xref="InterPro:IPR013317"
/db_xref="GeneID:8340452"
/translation="MPARRYHQGRQHRMEPQAVSDPQGYTPVPHPPAAPGDAIALWSH
FRARVESDSSLTKSEQAFLMIPEARTVIGDTIVLAVPDDFSKNYLEQRLEPMLTTHLA
AMFGPDIKFSLFVDKIMENTPAPAAAGPVAPPAPVIQQLAPPPAHWTPPPAMQSGAEL
QVPAAFHSDPPAFAPDVPRPGLGGMALPPPRVSEPAPEENDPIAATLSLSTGRPGARS
STPDDGAKAQQAKLNEKYVFETFVIGSSNRFAHAAAVAVAEAPAKAYNPLFIYGDSGL
GKTHLLHAIGHYARNLYPGTRVRYVSTEEFTNDFINAIRDGAGNHLRKRYRDVDILMV
DDIQFLENKEGTQEEFFHTFNTLHNASKQIVISSDRPPKQLNTLEDRLRSRFEWGLIT
DIQPPELETRIAILRKKAQQEGLNAPPEVLEFIASKISTNIRELEGALIRVTAFASLN
RAPVDLSLAEDVLKNLMPDAAGPEITVSTIMAQTAMYFGITMEDLCGTSRSRILVTAR
QIAMYLCRELTDLSLPKIGQAFGGRDHTTVMHADRKIRSLLPERRAIFNQVTELTNRI
KQSG"
misc_feature 1162..1539
/locus_tag="Caci_0001"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 1165..1545
/locus_tag="Caci_0001"
/note="ATPases associated with a variety of cellular
activities; Region: AAA; smart00382"
/db_xref="CDD:214640"
misc_feature 1183..1206
/locus_tag="Caci_0001"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(1186..1209,1372..1374,1471..1473)
/locus_tag="Caci_0001"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 1360..1377
/locus_tag="Caci_0001"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 1510..1512
/locus_tag="Caci_0001"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 1804..2067
/locus_tag="Caci_0001"
/note="C-terminal domain of bacterial DnaA proteins. The
DNA-binding C-terminal domain of DnaA contains a
helix-turn-helix motif that specifically interacts with
the DnaA box, a 9-mer motif that occurs repetitively in
the replication origin oriC. Multiple...; Region:
Bac_DnaA_C; cd06571"
/db_xref="CDD:119330"
misc_feature order(1867..1869,1891..1896,1915..1917,1933..1941,
1966..1980,1987..1989,1996..2001)
/locus_tag="Caci_0001"
/note="DnaA box-binding interface [nucleotide binding];
other site"
/db_xref="CDD:119330"
gene 2834..4024
/locus_tag="Caci_0002"
/db_xref="GeneID:8331325"
CDS 2834..4024
/locus_tag="Caci_0002"
/EC_number="2.7.7.7"
/inference="protein motif:TFAM:TIGR00663"
/note="binds the polymerase to DNA and acts as a sliding
clamp"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit beta"
/protein_id="YP_003110798.1"
/db_xref="GI:256389234"
/db_xref="InterPro:IPR001001"
/db_xref="GeneID:8331325"
/translation="MKFRVERDVLSEAVAWTARSLPSRPAAPVLAGLVFEAVEGEGGE
DHGSVTLSGFDYEVSSRAQIGADVTEPGRILIHGKLLADIAKSLPNRPVEFSTEGSKV
LLSCGSSRFTLQTLPVEDYPALPTMPTATGAVTASGLAGAVSQVAIAAGRDDTIPMLT
GIRVEIEGEKITLVATDRFRLAVRELQWKPEQDDMSATALIPSKVLSDTAKALTGGDW
VSLALSGGDAGEGLIGFESGEGTSGKAKGSRRMTSRLLSGEFVKYRSLFPNEYNITAT
VETAPFLEAAKRVSLVADRTSPIKLAFTQGEVTLEAGAGDEAQASEAMDAVLDGEDIS
VSFNPSFLLDGLQVIDTQYAQLSFTVASKPAVLMGRPALDAPAQEEFRYLMMPLRVPG
QSAG"
misc_feature 2834..4009
/locus_tag="Caci_0002"
/note="DNA polymerase III subunit beta; Validated; Region:
PRK07761"
/db_xref="CDD:236089"
misc_feature 2834..4000
/locus_tag="Caci_0002"
/note="Beta clamp domain. The beta subunit (processivity
factor) of DNA polymerase III holoenzyme, refered to as
the beta clamp, forms a ring shaped dimer that encircles
dsDNA (sliding clamp) in bacteria. The beta-clamp is
structurally similar to the trimeric...; Region:
beta_clamp; cd00140"
/db_xref="CDD:238082"
misc_feature order(2903..2905,3068..3070,3089..3091,3443..3445)
/locus_tag="Caci_0002"
/note="putative DNA binding surface [nucleotide binding];
other site"
/db_xref="CDD:238082"
misc_feature order(3071..3073,3080..3082,3155..3157,3161..3163,
3704..3706,3794..3799)
/locus_tag="Caci_0002"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238082"
misc_feature order(3359..3361,3365..3376,3845..3847,3989..4000)
/locus_tag="Caci_0002"
/note="beta-clamp/clamp loader binding surface; other
site"
/db_xref="CDD:238082"
misc_feature order(3359..3361,3365..3370,3629..3631,3731..3733,
3770..3775,3854..3856,3989..4000)
/locus_tag="Caci_0002"
/note="beta-clamp/translesion DNA polymerase binding
surface; other site"
/db_xref="CDD:238082"
gene 4110..4988
/locus_tag="Caci_0003"
/db_xref="GeneID:8331326"
CDS 4110..4988
/locus_tag="Caci_0003"
/inference="protein motif:TFAM:TIGR00872"
/note="similar to full-length Gnd, these proteins seems to
have a truncated C-terminal 6PGD domainin; in
methylobacillus flagellatus this gene is essential for
NAD+-dependent oxidation of 6-phosphogluconate"
/codon_start=1
/transl_table=11
/product="6-phosphogluconate dehydrogenase"
/protein_id="YP_003110799.1"
/db_xref="GI:256389235"
/db_xref="InterPro:IPR004849"
/db_xref="InterPro:IPR006114"
/db_xref="InterPro:IPR006115"
/db_xref="InterPro:IPR006183"
/db_xref="GeneID:8331326"
/translation="MEIGLVGLGKMGGNMRERIRQAGHTVVGYDRDPKLADVGSLKEL
VQTLAAPRVIWIMVPAGEATDATVNELADLLHTGDMVIDGGNSRWTEDIKHAELLKAQ
GVAFVDAGVSGGVWGLQNGYALMVGGDEADIARVQPVFDALKPAGDSGFVHAGGVGAG
HFSKMVHNGIEYGIMQSYAEGWELLEAAPNVTNVREVFRSWQEGTVIRSWLLDLLVRA
LDDDEHLAGIRGYADDSGEGRWTVEAGIDMAVPTPAITASLYARFTSRQEDSPQMKAI
AALRNQFGGHAVKKES"
misc_feature 4110..4985
/locus_tag="Caci_0003"
/note="6-phosphogluconate dehydrogenase-like protein;
Reviewed; Region: PRK09599"
/db_xref="CDD:236582"
misc_feature 4110..4979
/locus_tag="Caci_0003"
/note="6-phosphogluconate dehydrogenase-like protein;
Reviewed; Region: PRK12490"
/db_xref="CDD:237116"
gene 4998..6143
/locus_tag="Caci_0004"
/db_xref="GeneID:8331327"
CDS 4998..6143
/locus_tag="Caci_0004"
/inference="protein motif:TFAM:TIGR00611"
/note="TIGRFAM: DNA replication and repair protein RecF;
PFAM: SMC domain protein;
KEGG: sma:SAV_4319 recombination protein F"
/codon_start=1
/transl_table=11
/product="DNA replication and repair protein RecF"
/protein_id="YP_003110800.1"
/db_xref="GI:256389236"
/db_xref="InterPro:IPR001238"
/db_xref="InterPro:IPR003395"
/db_xref="GeneID:8331327"
/translation="MRVTHLSLADFRSYASLDVALGGGVTAFVGPNGQGKTNLVEAIG
YIATLDSHRVATDQPLVRFGAPRAIVRANVEREGRTQLVEIELNPGGANRARLNRNPV
PRPREVLGVLRTVLFAPEDLALVKGDPGERRRFLDELLVARWPRFAGVRADYDRVLKQ
RNTLLRTAAMARRNKASGPNISTLDAWDHHLALAGAELVAARLALISALSPLVDKCYV
EIAEGGQTRIGYRSTISAEPDPTAAALTEQFMTALGEARANELDRGITLVGPHRDEMV
LELTSSSGDNMPARGYASHGESWSYALALRLAAYDLLRSDGSDGGEPVLILDDVFAEL
DAKRRRRLAERVSGADQVLITAAVDADVPEQLIGQKFTVADGQVSAA"
misc_feature 4998..6137
/locus_tag="Caci_0004"
/note="recombination protein F; Reviewed; Region: recF;
PRK00064"
/db_xref="CDD:234608"
misc_feature 5004..>5495
/locus_tag="Caci_0004"
/note="ATP-binding cassette domain of RecF; Region:
ABC_RecF; cd03242"
/db_xref="CDD:213209"
misc_feature 5085..5108
/locus_tag="Caci_0004"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213209"
misc_feature order(5094..5099,5103..5111,5301..5303)
/locus_tag="Caci_0004"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213209"
misc_feature 5292..5303
/locus_tag="Caci_0004"
/note="Q-loop/lid; other site"
/db_xref="CDD:213209"
misc_feature <5784..6134
/locus_tag="Caci_0004"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature 5874..5903
/locus_tag="Caci_0004"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature 5967..5984
/locus_tag="Caci_0004"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature 5991..6002
/locus_tag="Caci_0004"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature 6057..6077
/locus_tag="Caci_0004"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene 6140..6658
/locus_tag="Caci_0005"
/db_xref="GeneID:8331328"
CDS 6140..6658
/locus_tag="Caci_0005"
/inference="protein motif:PFAM:PF05258"
/note="PFAM: protein of unknown function DUF721;
KEGG: sgr:SGR_3704 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110801.1"
/db_xref="GI:256389237"
/db_xref="InterPro:IPR007922"
/db_xref="GeneID:8331328"
/translation="MNPQPVDNGSGAEGGDPQDSGVDLARAALAAARARGKDNGAGWS
GNRRRNSNSGQRSGSGPDERDPQLLSSAIPRMIEARGWSVPAAVGGVMGRWGEIVGSH
ISAHCTPVEFHDGVLMVRTDSAAWATELRMLAPQLLAKLNAELGTSRAAHGGRDAAGA
IATLKVVGPGGR"
misc_feature 6344..6577
/locus_tag="Caci_0005"
/note="Protein of unknown function (DUF721); Region:
DUF721; pfam05258"
/db_xref="CDD:218524"
gene 7225..9210
/gene="gyrB"
/locus_tag="Caci_0006"
/db_xref="GeneID:8331329"
CDS 7225..9210
/gene="gyrB"
/locus_tag="Caci_0006"
/EC_number="5.99.1.3"
/inference="protein motif:TFAM:TIGR01059"
/note="negatively supercoils closed circular
double-stranded DNA"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit B"
/protein_id="YP_003110802.1"
/db_xref="GI:256389238"
/db_xref="InterPro:IPR000565"
/db_xref="InterPro:IPR001241"
/db_xref="InterPro:IPR002288"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR006171"
/db_xref="InterPro:IPR011557"
/db_xref="InterPro:IPR013506"
/db_xref="GeneID:8331329"
/translation="MADVEPTGGSTPSLDGIYNADSISVLEGLEAVRKRPGMYIGSTG
ERGLHHLVYEIVDNSVDEAMAGYADTIEVWLLADGGVKVVDNGRGIPVGINTKTGKSA
LEVVMTILHAGGKFGDGGYKVSGGLHGVGVSVVNALSSRVEVEVHTDGFVWNQVYKHG
VPETEVQKGGPAADTGTSTIFWADVDIFETTVYSFETLSRRFQEMAFLNKGLTISLTD
ERPEFRDENGEQRSVKYHAEGGIADFVRHINSRKGEPVHPNVIDFEGEDKDRTLAAEI
ALQWNSQYSESIYTFANNINTHGGGTHEEGFRAALTTLINKYARDQKLLKEKDDNLAG
EDIREGLTTIVSVKLAEPQFEGQTKDKLGNPEAKTFVQRLVYEKLGEWLEENPNEARE
VIRKTIQASTARMAARKARELTRRKGLLESSSLPGKLSDCQSNDPTKTEIFIVEGDSA
GGSARSGRDPMTQAILPIRGKILNVEKARIDKVLQNTEVQALISALGTGVHDDFDISR
LRYHKIILMADADVDGAHINTLLLTLLFRFMKPLVEAGHVYLAAPPLYKVKWTNNDFN
YAYSDRERDQLLEAGVGAGKRRKDETVQRFKGLGEMNAEELRITTMDREHRILRQVTL
DDAAQADDLFSVLMGEDVEARRNFIQRNAKDVRFLDI"
misc_feature 7276..9207
/gene="gyrB"
/locus_tag="Caci_0006"
/note="DNA gyrase subunit B; Validated; Region: gyrB;
PRK05644"
/db_xref="CDD:235542"
misc_feature 7366..>7497
/gene="gyrB"
/locus_tag="Caci_0006"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature 7396..7398
/gene="gyrB"
/locus_tag="Caci_0006"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature order(7483..7485,7489..7491)
/gene="gyrB"
/locus_tag="Caci_0006"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
misc_feature 7939..8463
/gene="gyrB"
/locus_tag="Caci_0006"
/note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
a ribosomal S5 domain 2-like fold, of the type found in
proteins of the type IIA family of DNA topoisomerases
similar to the B subunits of E. coli DNA gyrase and E.
coli Topoisomerase IV which are; Region:
TopoII_Trans_DNA_gyrase; cd00822"
/db_xref="CDD:238419"
misc_feature 8101..8103
/gene="gyrB"
/locus_tag="Caci_0006"
/note="anchoring element; other site"
/db_xref="CDD:238419"
misc_feature order(8275..8277,8284..8289,8293..8295,8428..8433,
8443..8445,8455..8457)
/gene="gyrB"
/locus_tag="Caci_0006"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238419"
misc_feature order(8293..8295,8299..8301)
/gene="gyrB"
/locus_tag="Caci_0006"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238419"
misc_feature 8542..8883
/gene="gyrB"
/locus_tag="Caci_0006"
/note="Topoisomerase-primase domain. This is a nucleotidyl
transferase/hydrolase domain found in type IA, type IIA
and type IIB topoisomerases, bacterial DnaG-type primases,
small primase-like proteins from bacteria and archaea, OLD
family nucleases from...; Region: TOPRIM; cl00718"
/db_xref="CDD:242046"
misc_feature order(8560..8565,8572..8574,8779..8781,8785..8787,
8791..8793)
/gene="gyrB"
/locus_tag="Caci_0006"
/note="active site"
/db_xref="CDD:173773"
misc_feature order(8560..8562,8779..8781)
/gene="gyrB"
/locus_tag="Caci_0006"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:173773"
misc_feature 8980..9174
/gene="gyrB"
/locus_tag="Caci_0006"
/note="DNA gyrase B subunit, carboxyl terminus; Region:
DNA_gyraseB_C; pfam00986"
/db_xref="CDD:201537"
gene 9293..11920
/locus_tag="Caci_0007"
/db_xref="GeneID:8331330"
CDS 9293..11920
/locus_tag="Caci_0007"
/EC_number="5.99.1.3"
/inference="protein motif:TFAM:TIGR01063"
/note="negatively supercoils closed circular
double-stranded DNA"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit A"
/protein_id="YP_003110803.1"
/db_xref="GI:256389239"
/db_xref="InterPro:IPR002205"
/db_xref="InterPro:IPR005743"
/db_xref="InterPro:IPR006691"
/db_xref="GeneID:8331330"
/translation="MDETPQGDRIDPVDLQTEMQRSYLDYAMSVIVGRALPDVRDGLK
PVHRRVLYAMYDGGYRPEKGYYKCARVVGEVMGIYHPHGDSPIYDTLVRLAQPWSLRM
VLVDGNGNFGSPGNDPAAAMRYTECKMAPLAMEMVRDIDEDTVDFRPNYDGRSSEPVV
LPARFPNLLVNGSTGIAVGMATNIPSHNLREVNDGVQWFLQNPEATNEELLEALIERI
KGPDFPTGALIVGRRGIEDAYRTGRGSITMRAVVNTEEINGRMCLVVTELPYQVNPDN
LALKIAELVKDGKVAGIADVRDESSSRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQDS
FGANMLALVDDVPRTLSLDAFIRHWVTHQIDVIVRRTRFRLRKAQERAHILVGLLKAL
DAIDEVVALIRRSPTVDEARSGLIELLTIDEIQANAILEMQLRRLAALERQRIEAEHN
ELMAKIADYTAILESPERQRRIVSEELQAISDKYGDDRRSQLVPYEGDMSIEDLIPEE
DVVVTITRGGYTRRTRTDLYRSQKRGGKGVKGAQLKQDDIVDHFFVTTTHHWLLFFTN
KGRVYRAKAHELPDTARDARGQHVANLLAFLPDEKIAQVLDLRDYEQTPYLVLATKNG
LIKKTPLKDYDSPRSAGVIAINLREDDELIAAELVSPEDDLLLVSKQAQGLRFTATDE
ALRPMGRATSGVIGMRFREDDELLSMDVVRPDTFLFTATSGGYGKRTAVEMFPLRGRG
GLGVIAAKTVDERGGLVGAAVVDEGDEVMAITLSGGVIRTRVSEVRPTSRDTMGVRVI
NLGKGDTVLAIARNGDPGEVEDELGEEAGAPAEAAGADVVAEARENGAVVEASEGSEV
IDESEGSDESDGSEASSEE"
misc_feature 9308..11737
/locus_tag="Caci_0007"
/note="DNA gyrase subunit A; Validated; Region: PRK05560"
/db_xref="CDD:235502"
misc_feature 9386..10732
/locus_tag="Caci_0007"
/note="DNA Topoisomerase, subtype IIA; domain A';
bacterial DNA topoisomerase IV (C subunit, ParC),
bacterial DNA gyrases (A subunit, GyrA),mammalian DNA
toposiomerases II. DNA topoisomerases are essential
enzymes that regulate the conformational changes...;
Region: TOP4c; cd00187"
/db_xref="CDD:238111"
misc_feature order(9386..9469,9482..9631,9635..9691,9695..9766,
9773..9775)
/locus_tag="Caci_0007"
/note="CAP-like domain; other site"
/db_xref="CDD:238111"
misc_feature 9662..9664
/locus_tag="Caci_0007"
/note="active site"
/db_xref="CDD:238111"
misc_feature order(10469..10477,10484..10495,10526..10531,10571..10621)
/locus_tag="Caci_0007"
/note="primary dimer interface [polypeptide binding];
other site"
/db_xref="CDD:238111"
misc_feature 10967..11110
/locus_tag="Caci_0007"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:217832"
misc_feature 11138..11272
/locus_tag="Caci_0007"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:217832"
misc_feature 11279..11428
/locus_tag="Caci_0007"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:217832"
misc_feature 11438..11581
/locus_tag="Caci_0007"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:217832"
misc_feature 11588..11725
/locus_tag="Caci_0007"
/note="DNA gyrase C-terminal domain, beta-propeller;
Region: DNA_gyraseA_C; pfam03989"
/db_xref="CDD:217832"
gene 12855..13391
/locus_tag="Caci_0008"
/db_xref="GeneID:8331331"
CDS 12855..13391
/locus_tag="Caci_0008"
/inference="similar to AA sequence:KEGG:SAV_4323"
/note="KEGG: sma:SAV_4323 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110804.1"
/db_xref="GI:256389240"
/db_xref="GeneID:8331331"
/translation="MGTVAYQQSDSAQGQAGTRQQAGGGWGARPNSPAGAPTGAPRYQ
QQQAPAAAPRGRKARLRVAKVDPWSVMKTTFVLSIAFAVVSVVAAALLWSALNALGVF
DSINHTLASVAPANQPNSVTLTSVLSFGKVLSFTALVSVVNIVLFTALATLAAYLYNM
CSSLVGGIEVTLADDTAS"
misc_feature 13032..13379
/locus_tag="Caci_0008"
/note="Transmembrane domain of unknown function (DUF3566);
Region: DUF3566; pfam12089"
/db_xref="CDD:152524"
gene 13459..13535
/locus_tag="Caci_R0001"
/note="tRNA-Ile1"
/db_xref="GeneID:8331332"
tRNA 13459..13535
/locus_tag="Caci_R0001"
/product="tRNA-Ile"
/db_xref="GeneID:8331332"
gene complement(13602..14144)
/locus_tag="Caci_0009"
/db_xref="GeneID:8331333"
CDS complement(13602..14144)
/locus_tag="Caci_0009"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: rlt:Rleg2_4895 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110805.1"
/db_xref="GI:256389241"
/db_xref="GeneID:8331333"
/translation="MSAVQIAGCSAAGKSAIATALAHQGLTTIDSDADPHLARFVDPQ
GTIVAQPPPAPDLPWLAEHSWAWDPNRLDELIQTAAPATLYVCGGADNQHEMANRFTQ
VFLLEIDEPTMLARLDARRDYHEWGHVGDTREYLRRKLPILQDTLRASGAIVIDARQP
LDQVVAAVLRYTPPMAPFSF"
misc_feature complement(13635..14123)
/locus_tag="Caci_0009"
/note="AAA domain; Region: AAA_17; cl17253"
/db_xref="CDD:247807"
gene complement(14277..14699)
/locus_tag="Caci_0010"
/db_xref="GeneID:8331334"
CDS complement(14277..14699)
/locus_tag="Caci_0010"
/inference="protein motif:PFAM:PF01453"
/note="PFAM: Curculin domain protein (mannose-binding)
lectin;
SMART: Curculin domain protein (mannose-binding) lectin;
KEGG: pfl:PFL_2127 putidacin L1"
/codon_start=1
/transl_table=11
/product="Curculin domain-containing protein
(mannose-binding) lectin"
/protein_id="YP_003110806.1"
/db_xref="GI:256389242"
/db_xref="InterPro:IPR001480"
/db_xref="GeneID:8331334"
/translation="MVKRTIGAIAGAAALAAALSVAGTGTALAATGGDHLNKGDTMYA
NDDIHNPAGTKLVFQPDGNLVEYRYDGHVCWATGTNGRGGTRVTYQNDGNLVMYASTD
DSRPIWASGTSGDNGLNVNINARGEIWVGYDQLTNACE"
sig_peptide complement(14610..14699)
/locus_tag="Caci_0010"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.991 at
residue 30"
misc_feature complement(14364..>14573)
/locus_tag="Caci_0010"
/note="Bulb-type mannose-specific lectin. The domain
contains a three-fold internal repeat (beta-prism
architecture). The consensus sequence motif QXDXNXVXY is
involved in alpha-D-mannose recognition. Lectins are
carbohydrate-binding proteins which specifically...;
Region: B_lectin; cd00028"
/db_xref="CDD:237995"
misc_feature complement(<14370..14552)
/locus_tag="Caci_0010"
/note="D-mannose binding lectin; Region: B_lectin;
pfam01453"
/db_xref="CDD:216511"
misc_feature complement(order(14406..14408,14412..14414,14418..14420,
14424..14426,14430..14432,14499..14501,14505..14507,
14511..14513,14517..14519,14523..14525))
/locus_tag="Caci_0010"
/note="mannose binding site [chemical binding]; other
site"
/db_xref="CDD:237995"
misc_feature complement(order(14364..14399,14406..14432,14436..14438,
14442..14444,14448..14450,14475..14477))
/locus_tag="Caci_0010"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:237995"
gene complement(14928..15650)
/locus_tag="Caci_0011"
/db_xref="GeneID:8331335"
CDS complement(14928..15650)
/locus_tag="Caci_0011"
/inference="protein motif:PFAM:PF07702"
/note="PFAM: UbiC transcription regulator-associated
domain protein; GntR family transcriptional regulator;
SMART: GntR family transcriptional regulator;
KEGG: saq:Sare_0152 GntR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="GntR family transcriptional regulator"
/protein_id="YP_003110807.1"
/db_xref="GI:256389243"
/db_xref="InterPro:IPR000524"
/db_xref="InterPro:IPR011663"
/db_xref="GeneID:8331335"
/translation="MKRVDDRPQHARIAADLRAKILAGDITGTLPPFKRLMELYSTTT
NTAQRAVALLKAEGFVEGQRGKALIIRADRIRIVDAASQFEPPASTITYQILHIGPAR
PPADAAQKLGLAEGETALLRKRLMLRDEEPVEIEWSFYPESVVTGTALDKPLPQRDLA
TAPTVLAALGWKQAGLVDEIQVREPTTEELQTLELPDEIPVMRTLRTITDAEGTVLEV
TVMITSGHLYGVRYQQKLTPPA"
misc_feature complement(14967..15647)
/locus_tag="Caci_0011"
/note="Transcriptional regulators [Transcription]; Region:
PhnF; COG2188"
/db_xref="CDD:225099"
misc_feature complement(15453..15629)
/locus_tag="Caci_0011"
/note="Winged helix-turn-helix (WHTH) DNA-binding domain
of the GntR family of transcriptional regulators; Region:
WHTH_GntR; cd07377"
/db_xref="CDD:153418"
misc_feature complement(order(15453..15458,15462..15467,15495..15497,
15504..15509,15513..15527,15549..15554,15558..15560,
15621..15623,15627..15629))
/locus_tag="Caci_0011"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:153418"
misc_feature complement(14967..15377)
/locus_tag="Caci_0011"
/note="The UbiC transcription regulator-associated (UTRA)
domain is a conserved ligand-binding domain; Region: UTRA;
smart00866"
/db_xref="CDD:214869"
gene 15874..16083
/locus_tag="Caci_0012"
/db_xref="GeneID:8331336"
CDS 15874..16083
/locus_tag="Caci_0012"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110808.1"
/db_xref="GI:256389244"
/db_xref="GeneID:8331336"
/translation="MPRFEFKYASDLVVGDWAQIGGKWVEVLGCATDPSGWTRLILDR
SPLPETVVHQTVDMPWSPMRPAGSA"
gene 16080..16481
/locus_tag="Caci_0013"
/db_xref="GeneID:8331337"
CDS 16080..16481
/locus_tag="Caci_0013"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110809.1"
/db_xref="GI:256389245"
/db_xref="GeneID:8331337"
/translation="MRRPEDIGAFLAEHSDGRVIGQMPAMFGIAVTPAEAEFQRRLLA
AGHTGSYLALLGLAATLTFDAGEYFHTGEQNRRDLSEWHGYHRGLQTALACLVMHETG
SNPRQAALMVAEHTETLIRCRWANRPAKGGG"
gene 16485..16967
/locus_tag="Caci_0014"
/db_xref="GeneID:8331338"
CDS 16485..16967
/locus_tag="Caci_0014"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
KEGG: tfu:Tfu_2295 hypothetical protein"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_003110810.1"
/db_xref="GI:256389246"
/db_xref="InterPro:IPR003594"
/db_xref="GeneID:8331338"
/translation="MDVWSKEFAGRPECLAEARRFTYAVLGRGDGAHIAALVADELAG
NAIRHTASGRPGGEFILRLARFGNRCRVRVDDQGGPTTPEVCAATDFEEAGRGLTIVA
SLSAQWGVEGDEHARSVWAEITFEEIPGISGPDGPAVDLPPQARARRKVGMTTEDWTR
"
misc_feature 16506..16799
/locus_tag="Caci_0014"
/note="Histidine kinase-like ATPase domain; Region:
HATPase_c_2; pfam13581"
/db_xref="CDD:222239"
misc_feature 16596..16817
/locus_tag="Caci_0014"
/note="Histidine kinase-, DNA gyrase B-, and HSP90-like
ATPase; Region: HATPase_c; pfam02518"
/db_xref="CDD:217081"
misc_feature order(16605..16607,16617..16619,16626..16628,16704..16706,
16710..16712,16716..16718,16722..16727,16767..16778)
/locus_tag="Caci_0014"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature 16617..16619
/locus_tag="Caci_0014"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature order(16716..16718,16722..16724,16767..16769,16773..16775)
/locus_tag="Caci_0014"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene 16967..17629
/locus_tag="Caci_0015"
/db_xref="GeneID:8331339"
CDS 16967..17629
/locus_tag="Caci_0015"
/inference="protein motif:PFAM:PF01381"
/note="PFAM: helix-turn-helix domain protein;
SMART: helix-turn-helix domain protein"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_003110811.1"
/db_xref="GI:256389247"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:8331339"
/translation="MALHVDYAAQRAFSRIIAGLRSARLDAELSQNALATGLPVRGRA
VSEWETGAIEPTLGHLIQWSWELGRRLVIVGRDGELRYGPVRQRPGELWEAFERRRLA
VPLRNRRLALGMAQGELGELVGVSRDSIQRWELVRVPPRPIAHVVWAQKLGYSLDTRP
VADGGPRLRRVGSAGLALPGLSGQIGQQGQPGLTGQAERSASGPGSPAGELRAAADGR
RG"
misc_feature 17024..>17152
/locus_tag="Caci_0015"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cl17200"
/db_xref="CDD:247754"
misc_feature order(17027..17029,17039..17041,17114..17116)
/locus_tag="Caci_0015"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238045"
misc_feature order(17036..17038,17111..17113)
/locus_tag="Caci_0015"
/note="salt bridge; other site"
/db_xref="CDD:238045"
misc_feature order(17057..17062,17093..17095,17102..17104,17114..17119)
/locus_tag="Caci_0015"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
gene complement(17749..18954)
/locus_tag="Caci_0016"
/db_xref="GeneID:8331340"
CDS complement(17749..18954)
/locus_tag="Caci_0016"
/inference="protein motif:PFAM:PF00089"
/note="PFAM: peptidase S1 and S6 chymotrypsin/Hap;
KEGG: sgr:SGR_3958 serine protease"
/codon_start=1
/transl_table=11
/product="peptidase S1 and S6 chymotrypsin/Hap"
/protein_id="YP_003110812.1"
/db_xref="GI:256389248"
/db_xref="InterPro:IPR001254"
/db_xref="InterPro:IPR001940"
/db_xref="InterPro:IPR008256"
/db_xref="GeneID:8331340"
/translation="MTGFEHDPYQPEQPATGDPQPWGHPSSGPVLGPAHASASAYPPA
YPSASSPSPAASEPMPPYTPPITSITPGYGNPGEAGGLGGPGSFGGPGGFGGPGGPGG
PGYTTHPAFSPEPPRRPRRKRRMGMALIIAGTIAASAAAGGIAGTIASHNNSSNSASS
SVPLNNTSVNTPVSNQTGTPTTTVGQVAKAALPTVVQVSVESYQGKSVGSGVILTADG
LILTNNHVITDAANGNGQITITFNNGKTAQASIVGYDSGSDLAVIKAQSVSGLPTASL
GDSSKIQIGDTVVAIGSPDGLQSTVTSGIVSALNRQVTVSSESSSRFSSGSQVTYSAI
QTDASLNPGNSGGPLLNAQGQVIGINSAIYSPTSSANAQGGSVGLGFSIPIDQVKTML
AKLEGGQMS"
misc_feature complement(17878..18330)
/locus_tag="Caci_0016"
/note="Trypsin-like peptidase domain; Region: Trypsin_2;
pfam13365"
/db_xref="CDD:222077"
gene 19091..19840
/locus_tag="Caci_0017"
/db_xref="GeneID:8331341"
CDS 19091..19840
/locus_tag="Caci_0017"
/inference="similar to AA sequence:KEGG:SGR_419"
/note="KEGG: sgr:SGR_419 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110813.1"
/db_xref="GI:256389249"
/db_xref="GeneID:8331341"
/translation="MDRDPLPDARALVRERYPQAVYAVLAGSVLTAHRTPGSDLDIVV
ALPPGDPLAPRRESLVFRDWPVELFVHDEQTLDQWLAKEYRERKPSLYRMVGRGTPIV
GDPADRQAYCRAVLDAGPDPMGPAQLEAARYGLTDLLDDLFHAGDPGERQVIAATLWT
AAGHHALVAGNRWDGTGKWLLRELRDHDPDLADRWLAAQHDAAAVEAFARDVLDRLGG
PLFDGYQAVAPRAETTKTTKTTKTTEFTRST"
misc_feature 19097..19354
/locus_tag="Caci_0017"
/note="Nucleotidyltransferase (NT) domain of
Staphylococcus aureus kanamycin nucleotidyltransferase,
and similar proteins; Region: NT_KNTase_like; cd05403"
/db_xref="CDD:143393"
misc_feature order(19166..19174,19181..19183,19202..19207,19211..19213,
19283..19285,19289..19291)
/locus_tag="Caci_0017"
/note="active site"
/db_xref="CDD:143393"
misc_feature order(19166..19174,19181..19183,19202..19207,19211..19213)
/locus_tag="Caci_0017"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143393"
misc_feature order(19205..19207,19211..19213,19289..19291)
/locus_tag="Caci_0017"
/note="metal binding triad [ion binding]; metal-binding
site"
/db_xref="CDD:143393"
misc_feature order(19283..19285,19289..19291)
/locus_tag="Caci_0017"
/note="antibiotic binding site [chemical binding]; other
site"
/db_xref="CDD:143393"
gene complement(19886..20500)
/locus_tag="Caci_0018"
/db_xref="GeneID:8331342"
CDS complement(19886..20500)
/locus_tag="Caci_0018"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110814.1"
/db_xref="GI:256389250"
/db_xref="GeneID:8331342"
/translation="MRIRPVLAVAGSVFLFSSNGFAAHAATQAPSGNSLPATGTAVSL
TEDGDMVLECNGVLHRFEVLGTGQVRVGARVAGDQPTVAVRTEAEQLTGYDADLGTVT
VSEKTPADGDFVAPAVGREFPAAESLAQDLTISMQHSPCGGGEPATFTNKAAFPLLNT
NMTAFPPRNAVFLMTDPVELTDIANPSGPSIMLTEFPLTITQAA"
sig_peptide complement(20423..20500)
/locus_tag="Caci_0018"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.934 at
residue 26"
gene complement(20593..21360)
/locus_tag="Caci_0019"
/db_xref="GeneID:8331343"
CDS complement(20593..21360)
/locus_tag="Caci_0019"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: tfu:Tfu_2295 hypothetical protein"
/codon_start=1
/transl_table=11
/product="anti-sigma regulatory factor, serine/threonine
protein kinase"
/protein_id="YP_003110815.1"
/db_xref="GI:256389251"
/db_xref="GeneID:8331343"
/translation="MSYWSRSFPGLAENLAEVRQFIQMVLGDAPGAELVVLAGSELAG
NAIVHTASGAPGGQFVVHLAAFADRWQVRVDDAGSPTEPRVLVDSMDEHCDWDSESGR
GLAMVASISRKWGVLGDRAARAVWAEIPCPVPPGGGIESVMSGGMLEALESVARALEN
ENRPPYQELDTSSATAPATAAVPSVAIAPARWPGTMPSDPARAERIRRQASHAAFQRA
LIESAYAETLGPRPLPYWPPFPNPLALQGSSPGTRPR"
misc_feature complement(21028..21339)
/locus_tag="Caci_0019"
/note="Histidine kinase-like ATPase domain; Region:
HATPase_c_2; pfam13581"
/db_xref="CDD:222239"
misc_feature complement(21013..21282)
/locus_tag="Caci_0019"
/note="Histidine kinase-, DNA gyrase B-, and HSP90-like
ATPase; Region: HATPase_c; pfam02518"
/db_xref="CDD:217081"
gene complement(21461..22336)
/locus_tag="Caci_0020"
/db_xref="GeneID:8331344"
CDS complement(21461..22336)
/locus_tag="Caci_0020"
/inference="protein motif:PFAM:PF01381"
/note="PFAM: helix-turn-helix domain protein;
SMART: helix-turn-helix domain protein;
KEGG: nfa:nfa38930 DNA-binding protein"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_003110816.1"
/db_xref="GI:256389252"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:8331344"
/translation="MGMSAVRSPYAAKLGGRIRQFRMERALSSGELAAAASVTSSAVS
KVEHGKMVPSRDVLARIVTALNLPAEEQESLFDLLGQAAADAASNRGYGKGLTLLNQI
ADRERVCSAVSTFSNSIIPRLLQTAEYARDANRLTPWLSEREVGKAAMTHTERQSVLF
EDGREFTFLITEGVLRTWPGELTVMAAQFDRLRQMAVHPGVRVGILPWTSAMRGLPMV
TFTLYDDREVAVEMFTGELLMAQPDKVSTHVAQFRRFEESAVYGEEAIGLINRVEMDL
ARLPPLALDEDLSSK"
misc_feature complement(22124..22294)
/locus_tag="Caci_0020"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cl17200"
/db_xref="CDD:247754"
misc_feature complement(order(22193..22195,22268..22270,22280..22282))
/locus_tag="Caci_0020"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238045"
misc_feature complement(order(22196..22198,22271..22273))
/locus_tag="Caci_0020"
/note="salt bridge; other site"
/db_xref="CDD:238045"
misc_feature complement(order(22190..22195,22205..22207,22214..22216,
22247..22252))
/locus_tag="Caci_0020"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
gene complement(22500..23396)
/locus_tag="Caci_0021"
/db_xref="GeneID:8331345"
CDS complement(22500..23396)
/locus_tag="Caci_0021"
/inference="protein motif:PFAM:PF01381"
/note="PFAM: helix-turn-helix domain protein;
SMART: helix-turn-helix domain protein;
KEGG: fal:FRAAL6347 regulatory protein"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_003110817.1"
/db_xref="GI:256389253"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:8331345"
/translation="MVHGRGHTVGMSPARSVLAEELGRRLRRHRLDLGLSGLEVAARA
GVTQPSVSKIERGMMLPSTEVLERVLGVLGLADEHRTDLRDLLTRAVDDAADRRRHGR
GLALLDAIAERERNTTALRSFSTSMIPPLLQTADYARYAARLTPWMSERELGRASALH
LERQGVLFEQGRSFEFLLTESALRLCPGPPTLAATQADRLRVLSALPGVRIGIVPDSA
AVSEVFPLYGFTLHDDAAVAVETFTGELLLSRADEIAAHAAVLDGYAAGADYDLETAT
GLLTSDRRPLASIPAPAGAGTG"
misc_feature complement(<23211..>23282)
/locus_tag="Caci_0021"
/note="Helix-turn-helix; Region: HTH_3; pfam01381"
/db_xref="CDD:201759"
misc_feature complement(order(23226..23231,23241..23243,23250..23252))
/locus_tag="Caci_0021"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
misc_feature complement(23232..23234)
/locus_tag="Caci_0021"
/note="salt bridge; other site"
/db_xref="CDD:238045"
gene 23568..24164
/locus_tag="Caci_0022"
/db_xref="GeneID:8331346"
CDS 23568..24164
/locus_tag="Caci_0022"
/inference="protein motif:PFAM:PF01169"
/note="PFAM: protein of unknown function UPF0016;
KEGG: sco:SCO2347 integral membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110818.1"
/db_xref="GI:256389254"
/db_xref="InterPro:IPR001727"
/db_xref="GeneID:8331346"
/translation="MSLTALLTAFGVVFLAELPDKTAIASLILGARYRPSWVFAGVAA
AFVVHVALAVAAGSLLTLVPRRPLEAIVAVLFLGGAVLMLRSHGREAGEEEAEEAPDL
GDDAGFGKVAGTAFGVIMVAEFGDLTQIVTANLAAKFADPLAVGLGATLGLWAVGGLA
IVGGRSLLKVLPLHLIVRLAALVMVVLAGVSLWQAVAG"
misc_feature 23574..24089
/locus_tag="Caci_0022"
/note="Predicted membrane protein [Function unknown];
Region: COG2119"
/db_xref="CDD:225030"
misc_feature 23583..>23678
/locus_tag="Caci_0022"
/note="Uncharacterized protein family UPF0016; Region:
UPF0016; pfam01169"
/db_xref="CDD:216341"
misc_feature 23904..24089
/locus_tag="Caci_0022"
/note="Uncharacterized protein family UPF0016; Region:
UPF0016; pfam01169"
/db_xref="CDD:216341"
gene complement(24190..24807)
/locus_tag="Caci_0023"
/db_xref="GeneID:8331347"
CDS complement(24190..24807)
/locus_tag="Caci_0023"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: stp:Strop_2766 regulatory protein, TetR"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003110819.1"
/db_xref="GI:256389255"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331347"
/translation="MSNRDDLLAGAKKCLLEKGYSRTTARDIAQASGVSLAAIGYHFG
SKDALMNEAMFQAIGEWGDHLEEAFAKAGPNLSVQERFARVFDDVSATFDENQALWMA
SFELIIEIDRIPGARDMFRKAIPEARTGLANLILGIPEEDVDKDMEMGAGAVLYSLMA
GLLIQRFADTGQTPTGADLARGLRQLADVLEADVLKSSDKAAAVS"
misc_feature complement(24247..24798)
/locus_tag="Caci_0023"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:224228"
misc_feature complement(24649..24789)
/locus_tag="Caci_0023"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 24904..26529
/locus_tag="Caci_0024"
/db_xref="GeneID:8331348"
CDS 24904..26529
/locus_tag="Caci_0024"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: sco:SCO5516 integral membrane efflux protein"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily protein"
/protein_id="YP_003110820.1"
/db_xref="GI:256389256"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331348"
/translation="MTTTQNPGTAPAPRAGRKEWIGLAVLVLPCLLISMDMSVLLFGL
PFISASLKPSATQQLWIMDAYGFALAGLLITMGAVGDRIGRRRLLLIGATAFGAASVV
AAYSGSAEVLIGTRALLGVAGATLMPSTMALIRNMFHDPKQRQTAISLWTGGLIGGVT
LGPIVGGALLNHFWWGSVFLINLPAMALLLILGPLLLPEYKAPADGRRFDVLGSVLSM
AAVFPAVYGIKQLAVDGFSATAAGSLAFGIALAVAFVLRQHTAKNPLIDMELFRKPAF
RAPMLVNLCGNFVLMGFSLFNTQYLQSVAGMRPFTAALWSMAAMPFVSVGMGVTGALT
TKVRPGRIIGVAFLVSSAGALVLTLAHPGNPIVVLLIGAGIAAGGVVAAQSIVGNMVM
AAAPAERAGSASALNETGAELGSSLGMALLGSVGAAIYHHKMQTVGASGAPDAAVRAG
HETIGGADALAAQFPGPATHALLTTARDAYASGLHTAAGVGAVVLFLTALFAFRALRN
EPVLPAAPKKEKGTKSKDAMPAEISPDYAAQAV"
misc_feature 24955..>25911
/locus_tag="Caci_0024"
/note="methyl viologen resistance protein SmvA;
Provisional; Region: PRK14995"
/db_xref="CDD:184957"
misc_feature 24970..>25440
/locus_tag="Caci_0024"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(25012..25014,25021..25029,25033..25038,25087..25089,
25096..25101,25108..25110,25120..25125,25129..25134,
25270..25275,25282..25287,25294..25299,25306..25308,
25345..25350,25357..25362,25378..25380)
/locus_tag="Caci_0024"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(26620..27483)
/locus_tag="Caci_0025"
/db_xref="GeneID:8331349"
CDS complement(26620..27483)
/locus_tag="Caci_0025"
/inference="protein motif:PFAM:PF05368"
/note="PFAM: NmrA family protein; 3-beta hydroxysteroid
dehydrogenase/isomerase;
KEGG: kpn:KPN_04605 oxidoreductase"
/codon_start=1
/transl_table=11
/product="NmrA family protein"
/protein_id="YP_003110821.1"
/db_xref="GI:256389257"
/db_xref="InterPro:IPR002225"
/db_xref="InterPro:IPR008030"
/db_xref="GeneID:8331349"
/translation="MTIAITAAGGHLGRLVVEDLLARGVPAGQIRAIVRTPEKVQDFA
DRGVQVVRGDYADVPGLTEALRGADKWVFISSSGSDEDRLSQHLTAIQAGKAAGVPHV
VYTSIPKAETNPISFASVHKETEAAIKESGLPHTFLRNNWYWENLTASLPNAIEHGAI
IGAVGEGLTAFAARADYAAAAAVVATTEGHEGKIYELTGDRAYSYAEIAAEISRQTGK
EIAAVNLDPEEYRKTLAGFGLPDFLSAGLAHADSKIAEGALADVTSDLSTLIGRPTTT
VAEAITDALKA"
misc_feature complement(26668..27483)
/locus_tag="Caci_0025"
/note="Predicted nucleoside-diphosphate-sugar epimerases
[Cell envelope biogenesis, outer membrane / Carbohydrate
transport and metabolism]; Region: COG0702"
/db_xref="CDD:223774"
misc_feature complement(26656..27477)
/locus_tag="Caci_0025"
/note="triphenylmethane reductase (TMR)-like proteins,
NMRa-like, atypical (a) SDRs; Region: TMR_SDR_a; cd05269"
/db_xref="CDD:187578"
misc_feature complement(order(26962..26964,27055..27063,27253..27264,
27316..27327,27367..27369,27376..27381,27448..27459,
27463..27465))
/locus_tag="Caci_0025"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187578"
gene 27626..28087
/locus_tag="Caci_0026"
/db_xref="GeneID:8331350"
CDS 27626..28087
/locus_tag="Caci_0026"
/inference="protein motif:PFAM:PF01638"
/note="PFAM: helix-turn-helix HxlR type;
KEGG: sma:SAV_2662 transcriptional regulator"
/codon_start=1
/transl_table=11
/product="HxlR family transcriptional regulator"
/protein_id="YP_003110822.1"
/db_xref="GI:256389258"
/db_xref="InterPro:IPR002577"
/db_xref="GeneID:8331350"
/translation="MSTRVVTPGVVTPEAEERALGMAYDVVYDVLQAPCPSRQALEHV
TGRWGALIMMALREGPVRFNELRRRVDGVSEKMLSQGLQALERDGFVAREVQSTMPPK
VEYQLTPLGTQTSDRLADLVEFLEGRMPEVEAAQARHDEAASAAASVSASA"
misc_feature 27707..28024
/locus_tag="Caci_0026"
/note="Predicted transcriptional regulators
[Transcription]; Region: COG1733"
/db_xref="CDD:224647"
misc_feature 27779..28003
/locus_tag="Caci_0026"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:238042"
misc_feature order(27785..27790,27797..27799,27890..27892,27974..27979,
27983..27991,27995..28003)
/locus_tag="Caci_0026"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238042"
misc_feature order(27809..27811,27818..27820,27974..27976)
/locus_tag="Caci_0026"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:238042"
misc_feature order(27809..27817,27845..27856,27860..27865,27872..27877,
27881..27886,27902..27910,27932..27940)
/locus_tag="Caci_0026"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238042"
gene 28115..28855
/locus_tag="Caci_0027"
/db_xref="GeneID:8331351"
CDS 28115..28855
/locus_tag="Caci_0027"
/inference="similar to AA sequence:KEGG:SAV_994"
/note="KEGG: sma:SAV_994 conventional protein tyrosine
phosphatase"
/codon_start=1
/transl_table=11
/product="protein tyrosine/serine phosphatase"
/protein_id="YP_003110823.1"
/db_xref="GI:256389259"
/db_xref="InterPro:IPR016130"
/db_xref="GeneID:8331351"
/translation="MTRHVEFQRLHNFRDLGGYPAGAGRATKWGVLYRSDNLRKLNES
DDVERFRALDVHTVVDLRYPWEIEQSGRVPDFPGLRYVNLSIEHQPYDQGALGDDFDP
WRFLADRYMEVAQDGGKEIRGVLDVIADPESGTTVFHCASGKDRTGIIAMLVLSLIGV
SEDDVVADFALTELATERLIADWKAFYPDRELTWSAYARAPKEPMELFIADLKSRYGS
VEGYAEQELGVDEALVAALKAKLVDVEG"
misc_feature 28148..28633
/locus_tag="Caci_0027"
/note="Tyrosine phosphatase family; Region:
Y_phosphatase3; pfam13350"
/db_xref="CDD:222063"
misc_feature 28676..>28798
/locus_tag="Caci_0027"
/note="Tyrosine phosphatase family C-terminal region;
Region: Y_phosphatase3C; pfam13348"
/db_xref="CDD:222061"
gene complement(28835..29308)
/locus_tag="Caci_0028"
/db_xref="GeneID:8331352"
CDS complement(28835..29308)
/locus_tag="Caci_0028"
/inference="protein motif:PFAM:PF00583"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: rle:RL2084 acetyltransferase"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_003110824.1"
/db_xref="GI:256389260"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:8331352"
/translation="MTDIEIRPATLDDLDGLSHDSAELFAEDGLARDRLRDPDWPRDN
NRAWCAGLIAAPDALVLVATEEGTVVGHLIGTFSPASSMWTAARAELVSTHVAPSYRG
QGIGGRMVEDFIAWGKDRGAARLHVSAYTANSAAIRFYQRFGFVPLSIELTLDVD"
misc_feature complement(28871..29299)
/locus_tag="Caci_0028"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_3; pfam13302"
/db_xref="CDD:222034"
misc_feature complement(28925..29131)
/locus_tag="Caci_0028"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature complement(order(28988..28993,29021..29029))
/locus_tag="Caci_0028"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(29325..29969)
/locus_tag="Caci_0029"
/db_xref="GeneID:8331353"
CDS complement(29325..29969)
/locus_tag="Caci_0029"
/inference="protein motif:PFAM:PF01810"
/note="PFAM: lysine exporter (LYSE/YGGA);
KEGG: mjl:Mjls_3025 lysine exporter protein LysE/YggA"
/codon_start=1
/transl_table=11
/product="lysine exporter protein LysE/YggA"
/protein_id="YP_003110825.1"
/db_xref="GI:256389261"
/db_xref="InterPro:IPR001123"
/db_xref="GeneID:8331353"
/translation="MLATLLPFLIACTAVAAVPGQSTALIIRQSIRGGKRAGFATVLG
NESGVFVWGCAAAFGFTALLAASEIAYDGMRVVGACVLVWFAVQSFRSARRMKQDEAA
EETDELGGDARTKGPLWSYRAGLLTNLANPKAAIFAMSFLPQFVPAHAPKLPTMVLLA
ATWAVYEVFYYSLYVWCVQRLRAFFSRREVRRRMEQISGTVMLGLAVRMVVENS"
misc_feature complement(29334..29969)
/locus_tag="Caci_0029"
/note="Putative threonine efflux protein [Amino acid
transport and metabolism]; Region: RhtB; COG1280"
/db_xref="CDD:224199"
sig_peptide complement(29895..29969)
/locus_tag="Caci_0029"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.985) with cleavage site probability 0.512 at
residue 25"
gene 30098..30643
/locus_tag="Caci_0030"
/db_xref="GeneID:8331354"
CDS 30098..30643
/locus_tag="Caci_0030"
/inference="protein motif:TFAM:TIGR02983"
/note="TIGRFAM: RNA polymerase sigma-70 factor, sigma-E
family; RNA polymerase sigma factor, sigma-70 family;
PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain
protein; sigma-70 region 4 domain protein;
KEGG: fre:Franean1_0089 ECF subfamily RNA polymerase
sigma-24 factor"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-24 subunit"
/protein_id="YP_003110826.1"
/db_xref="GI:256389262"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="InterPro:IPR014325"
/db_xref="GeneID:8331354"
/translation="MRPEDEDEFRRFTAARWPGLVRTAYLLTGDLGHAEDLAQTTLIK
AYRSWHRVCRVEDVDAYVRKILINANRSRFRSKRPLEYSVAAVPEYPAWPPDDGSGVE
ERTVLFAALATLPPRQRAIVVLRYWEDLAEGEVAALVGCSVGTVKSQASRALAKLRKD
ARLAGLSAFQEPAAAMKGAQT"
misc_feature 30116..30544
/locus_tag="Caci_0030"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:234065"
misc_feature 30149..30331
/locus_tag="Caci_0030"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:218138"
misc_feature 30407..30541
/locus_tag="Caci_0030"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(30440..30442,30470..30472,30488..30493,30521..30523,
30527..30532,30536..30541)
/locus_tag="Caci_0030"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 30640..31470
/locus_tag="Caci_0031"
/db_xref="GeneID:8331355"
CDS 30640..31470
/locus_tag="Caci_0031"
/inference="similar to AA sequence:KEGG:SGR_5473"
/note="KEGG: sgr:SGR_5473 integral membrane protein"
/codon_start=1
/transl_table=11
/product="integral membrane protein"
/protein_id="YP_003110827.1"
/db_xref="GI:256389263"
/db_xref="GeneID:8331355"
/translation="MTDEAWENGLREVMTGAAGSTRVAPPPTDAILRGGRSSLRLRNG
LTGSGVLGMVAAAVIVGTSFGGGATVGSVQQAGTTSTSAQPPQAQDAAVTLGPASAKT
KVVVYEDYRCPPCRDVEAGTSAYLTEEADSGKIQVEYRAVNLIDRNGQTSGSGSTAAG
NAVQCAADRGDFSAYRSAVYAHQPQENLDAFTSSALLITIARTIPGLDTAAFEKCVDD
QPYAAAISSNYTRAFTTAHCTGVPCISVDGQQWTGSIPEGADVGKIINAWLAQKISAA
"
misc_feature 30949..31407
/locus_tag="Caci_0031"
/note="DSBA-like thioredoxin domain; Region: DSBA;
pfam01323"
/db_xref="CDD:216433"
misc_feature 30949..>31188
/locus_tag="Caci_0031"
/note="DsbA family; consists of DsbA and DsbA-like
proteins, including DsbC, DsbG, glutathione (GSH)
S-transferase kappa (GSTK),
2-hydroxychromene-2-carboxylate (HCCA) isomerase, an
oxidoreductase (FrnE) presumed to be involved in
frenolicin biosynthesis, a...; Region: DsbA_family;
cd02972"
/db_xref="CDD:239270"
misc_feature order(30973..30975,30982..30984)
/locus_tag="Caci_0031"
/note="catalytic residues [active]"
/db_xref="CDD:239270"
gene 31496..32140
/locus_tag="Caci_0032"
/db_xref="GeneID:8331356"
CDS 31496..32140
/locus_tag="Caci_0032"
/inference="protein motif:PFAM:PF08241"
/note="PFAM: methyltransferase type 11; methyltransferase
type 12;
KEGG: rpc:RPC_2940 methyltransferase type 11"
/codon_start=1
/transl_table=11
/product="methyltransferase type 11"
/protein_id="YP_003110828.1"
/db_xref="GI:256389264"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:8331356"
/translation="MTTDPKAIIESGYDAVAEEYLSTFGEGVPDDPRVRFIGALGEHL
ADGARVLELGCGAGIPATALLAQRFDVLGVDISAGQLALAAQRVPTAEFRKADMTSLD
LPAGSFDAVTAFYSFNHIPRAEQQPLLTAIARWLRPGGLLLASFGRGGSADDVELWLG
GVPMFFASHDPATNTRHLADAGFTPLVDELVSMETGRGSETWQWVLARSGERRR"
misc_feature 31631..32008
/locus_tag="Caci_0032"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:222415"
misc_feature 31640..31933
/locus_tag="Caci_0032"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(31652..31672,31718..31723,31781..31789,31835..31837)
/locus_tag="Caci_0032"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(32572..32655)
/locus_tag="Caci_R0002"
/note="tRNA-Leu7"
/db_xref="GeneID:8331357"
tRNA complement(32572..32655)
/locus_tag="Caci_R0002"
/product="tRNA-Leu"
/db_xref="GeneID:8331357"
gene 33113..34141
/locus_tag="Caci_0033"
/db_xref="GeneID:8331358"
CDS 33113..34141
/locus_tag="Caci_0033"
/inference="protein motif:PFAM:PF00498"
/note="PFAM: Forkhead-associated protein;
SMART: Forkhead-associated protein;
KEGG: sco:SCO3843 hypothetical protein"
/codon_start=1
/transl_table=11
/product="FHA domain-containing protein"
/protein_id="YP_003110829.1"
/db_xref="GI:256389265"
/db_xref="InterPro:IPR000253"
/db_xref="GeneID:8331358"
/translation="MGVLQRFERRIEGLVNGAFAKAFKSEVQPVEIASALQRECDDRA
AIVSQGRTMVPNDFTVELGGVDYERLATYAGPLGAELAELVREYGAEQRYMFVGPVEV
KFARAADLDTGMFRIQSQALAGVVPVSSMQGEPQGYDPYGQPPPYQGGPQGGPQGPGG
PQGPGGPQGPGGLQPVPPPNPVPQPAPWGSPPPPQGQGGPQPGWGAPPPGQGGYDQGG
YDPYGQPPPQQPGWGPPGQQQQQQQYAPPPQSQTQCWVEINGARHMLTKPVTTMGRGT
DVDLRVDDPSVSRRHAEIRIGTPSYVSDLGSTNGIVVDNQHVTQAPLRDGSVIHLGTT
TIIFRQQG"
misc_feature 33122..33469
/locus_tag="Caci_0033"
/note="Protein of unknown function (DUF2662); Region:
DUF3662; pfam12401"
/db_xref="CDD:204906"
misc_feature <33887..34120
/locus_tag="Caci_0033"
/note="FOG: FHA domain [Signal transduction mechanisms];
Region: COG1716"
/db_xref="CDD:224630"
misc_feature 33899..34135
/locus_tag="Caci_0033"
/note="Forkhead associated domain (FHA); found in
eukaryotic and prokaryotic proteins. Putative nuclear
signalling domain. FHA domains may bind phosphothreonine,
phosphoserine and sometimes phosphotyrosine. In
eukaryotes, many FHA domain-containing proteins...;
Region: FHA; cd00060"
/db_xref="CDD:238017"
misc_feature order(33932..33934,33968..33970,33974..33979,34034..34042)
/locus_tag="Caci_0033"
/note="phosphopeptide binding site; other site"
/db_xref="CDD:238017"
gene 34163..34690
/locus_tag="Caci_0034"
/db_xref="GeneID:8331359"
CDS 34163..34690
/locus_tag="Caci_0034"
/inference="protein motif:PFAM:PF00498"
/note="PFAM: Forkhead-associated protein;
SMART: Forkhead-associated protein;
KEGG: sgr:SGR_3729 hypothetical protein"
/codon_start=1
/transl_table=11
/product="FHA domain-containing protein"
/protein_id="YP_003110830.1"
/db_xref="GI:256389266"
/db_xref="InterPro:IPR000253"
/db_xref="GeneID:8331359"
/translation="MSQLTLTVIRLAFLVLLWLFVFSAVGVMRSDLYGSRTSKRQQAK
AAKAAAAATQQVPARGGARQQPYNPGARRSGPPAPTRLVVVGGSLAGTTVNITSGQQV
TMGRAHDSTIVLDDDYASSRHARLYPDASGQWIVEDLGSTNGTFLGQTKLNAPTVAQI
GVPIRIGKTVLELRA"
sig_peptide 34163..34243
/locus_tag="Caci_0034"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.965) with cleavage site probability 0.741 at
residue 27"
misc_feature <34343..34678
/locus_tag="Caci_0034"
/note="FOG: FHA domain [Signal transduction mechanisms];
Region: COG1716"
/db_xref="CDD:224630"
misc_feature 34403..34684
/locus_tag="Caci_0034"
/note="Forkhead associated domain (FHA); found in
eukaryotic and prokaryotic proteins. Putative nuclear
signalling domain. FHA domains may bind phosphothreonine,
phosphoserine and sometimes phosphotyrosine. In
eukaryotes, many FHA domain-containing proteins...;
Region: FHA; cd00060"
/db_xref="CDD:238017"
misc_feature order(34478..34480,34514..34516,34520..34525,34586..34594)
/locus_tag="Caci_0034"
/note="phosphopeptide binding site; other site"
/db_xref="CDD:238017"
gene 34710..36773
/locus_tag="Caci_0035"
/db_xref="GeneID:8331360"
CDS 34710..36773
/locus_tag="Caci_0035"
/inference="protein motif:PFAM:PF00481"
/note="PFAM: protein phosphatase 2C-like;
SMART: protein phosphatase 2C domain protein;
KEGG: sgr:SGR_3728 protein phosphatase"
/codon_start=1
/transl_table=11
/product="protein serine/threonine phosphatase"
/protein_id="YP_003110831.1"
/db_xref="GI:256389267"
/db_xref="InterPro:IPR001932"
/db_xref="InterPro:IPR014045"
/db_xref="GeneID:8331360"
/translation="MALVLRYAIRSHVGLIREGNEDSGYAGPRLLAIADGMGGAAAGE
LASAVVMTTVSRLDSPGGEDLLSGTGEMPVMAPGGAGPGQGQPAPGAPGGGPGGQGGP
GGVPENEQTLHISQHDMAARESGNAHSPADPAFGEPDLALLGGAVVAANERLRAIVAE
RPELEGMGTTLTAMLWSGGRFGMVHVGDSRAYRLRDGLLEQMTADHTWVQRLIDEGRI
TEEEAGHHPQRSLLMRVLDGRTQVEADIGTFDAYPGDRYLLCSDGLSGFVSQETLAET
LAAYADPQQAVDALIELALRAGGPDNITCIVADTLDDGTIPGASPNESTQMLGSLTPV
VVGAASEGVEQLPRFSTQGSGGPGPGPQQDDFPQNHPAGRAARLRSRRNQNQNSQNQN
AQNQQLAAEQHPGGPVTTAQQQFDPSAQTTELDSVPGQRGLVPGAENQQPGSRRNADG
GYGGAPDGGPGGPGGPAPAKRGKKGLIITGAVVVVLAAAAGGAYVYSQGQYYVTPSTD
SKQVLLYQGLSQVSFASSQQTMSEGPLWIASVPQSKRADLFKTESFGSKGAALSYLEQ
YRSAAKSCADYRHNQLVVQSHPQQSAVTGKTAGTTVPGQNLAPSAPPTSSKAGAPLAN
GPANTVQNPTAPTGDPAGTTAPTGGEQGSPEPQNPTSSPSAPASQPGDDPQMKAYCAG
TTDGP"
misc_feature <35160..35636
/locus_tag="Caci_0035"
/note="Serine/threonine phosphatases, family 2C, catalytic
domain; The protein architecture and deduced catalytic
mechanism of PP2C phosphatases are similar to the PP1,
PP2A, PP2B family of protein Ser/Thr phosphatases, with
which PP2C shares no sequence...; Region: PP2Cc; cd00143"
/db_xref="CDD:238083"
gene 36782..38761
/locus_tag="Caci_0036"
/db_xref="GeneID:8331361"
CDS 36782..38761
/locus_tag="Caci_0036"
/inference="protein motif:PFAM:PF01098"
/note="PFAM: cell cycle protein;
KEGG: sgr:SGR_3727 FtsW/RodA/SpoVE family cell cycle
protein"
/codon_start=1
/transl_table=11
/product="cell cycle protein"
/protein_id="YP_003110832.1"
/db_xref="GI:256389268"
/db_xref="InterPro:IPR001182"
/db_xref="GeneID:8331361"
/translation="MSAAPPRPEEPLIPKRRNTELLLSLFAVAVAMFAYANVGLADNG
KLPAGMWGVGAGLVVVVLVANGLTRYAAPYADPLFLPLTIFLNGIGLVLIHRLDIYDT
EHFQALHKLNPVKYHTPPTGSTTNQLMYTALGIIVMAGFLLFIKDHKVLQRYAYISMV
SGLFLVALPAMLPASMSSRNGAKSWVFLPGGVSIQPAEFGKLLLVSFFAAFLMAKRDA
LRVASRRVLGLNIPRGRDMGPIAVCWVLAMLILVFETDLGVSLMFFGAFVVLLYIATE
RTSWLVFGVTAFIGGAVFIATTVPHVQARVNNWLHPFTGEICARTAAPGTNCPSDQIS
QSIYGFATGGIFGKGLDQGRPWLVGFAKNADFILVTVGEELGMVGLFALMMVYTLFVM
RGFKTALLIRDNYGKLLAAGLSVTFALQVFITAGGVMRVIPLTGLPMPFLAAGGSALV
ANWVVVALLIRLSDSARRPLPPAIPLTDDELRAMRLAAAQKMPSNAAPARHAQPAAQT
PAGGPPRPHPLAQPGLGQTGLAQSGLDQTGLDTPSGSEEPAPPGASDPTEPMPVRRVA
AAGAGADDVTQAVPSQPRGYGEQTMLRAAEATQAMQATSGPRAEPEQGATESYTPAFE
DEDDDDVRTRPTPAPGANPGEVPGRPGPTERRYGP"
sig_peptide 36782..36892
/locus_tag="Caci_0036"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.965) with cleavage site probability 0.910 at
residue 37"
misc_feature 36986..38191
/locus_tag="Caci_0036"
/note="Bacterial cell division membrane protein [Cell
division and chromosome partitioning]; Region: FtsW;
COG0772"
/db_xref="CDD:223843"
gene 38758..40230
/locus_tag="Caci_0037"
/db_xref="GeneID:8331362"
CDS 38758..40230
/locus_tag="Caci_0037"
/EC_number="2.4.1.129"
/inference="protein motif:PRIAM:2.4.1.129"
/note="PFAM: penicillin-binding protein transpeptidase;
KEGG: sma:SAV_4339 penicillin-binding protein"
/codon_start=1
/transl_table=11
/product="peptidoglycan glycosyltransferase"
/protein_id="YP_003110833.1"
/db_xref="GI:256389269"
/db_xref="InterPro:IPR001460"
/db_xref="GeneID:8331362"
/translation="MNQPIRRVAIFCFLLIASLLVSSNYLQVVNADSYKARAGNQRTE
LDYYAYPRGKILTADGTVIADSVPSGGLQYKYQRTYPLKADYANITGWKSIVYGSRDI
ENVLDKYLQGTDSSESVANFMDTLTGKSKKGGDVQLTLQNAVQQAAIKGLGKQNGSVV
ALDPTTGAILAMYSSPSFDPNGIASNVSETSTAAGNALEADKGKPNLNHAIGENYPPG
SVFKIVTAAAALDSGKFTETGSTGADPNFYSNGSGYKLKNEDGTCSGTDLKTALAESC
NSVYGFVGATLGSQIMSTYASKFGFNDPSLKIPLQVAQSNFPSPATVGTNVLGLAQDS
IGQGDTQVTPLQAAMIAAAVANGGTIMQPYMVDKETAPNGHVTYKGSDHQHELSQAMS
PATAATLDDMMQNVVTHGTAQGRGIPGVQMGAKTGTAQRASGQNPLAWFVCYGTANGK
KVAVAVMVDTNDPSIRSDVSGVNFAGPTAQAVLKAALGVG"
sig_peptide 38758..38844
/locus_tag="Caci_0037"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.990) with cleavage site probability 0.354 at
residue 29"
misc_feature 39226..40218
/locus_tag="Caci_0037"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; pfam00905"
/db_xref="CDD:216183"
gene 40430..42532
/locus_tag="Caci_0038"
/db_xref="GeneID:8331363"
CDS 40430..42532
/locus_tag="Caci_0038"
/inference="protein motif:PFAM:PF00069"
/note="PFAM: serine/threonine protein kinase-related;
tyrosine protein kinase;
SMART: serine/threonine protein kinase; tyrosine protein
kinase;
KEGG: sgr:SGR_3725 serine/threonine protein kinase"
/codon_start=1
/transl_table=11
/product="serine/threonine protein kinase"
/protein_id="YP_003110834.1"
/db_xref="GI:256389270"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR001245"
/db_xref="InterPro:IPR002290"
/db_xref="InterPro:IPR008271"
/db_xref="InterPro:IPR017441"
/db_xref="InterPro:IPR017442"
/db_xref="GeneID:8331363"
/translation="MSGTYPGAEQPRRLGGRYELGAVLGRGGMAEVFMARDTRLGRTV
AVKTLRADLSRDPTFQARFRREAQSAASLNHPAIVAIYDTGEDFENGVSVPYIVMEYA
DGSTLRDLLHSGRRLLPERALEITAGVLQALDYSHRNGIIHRDIKPANIMLTRSGTVK
VMDFGIARAMADNGMTMTQTAAVIGTAQYLSPEQAKGETVDARSDLYSTGCLMFELLT
GRPPFVGDSPVAVAYQHVREEPQPPSSYDPEVSPAIDAVVLKSLAKTADARYQSATEM
RADIERVLDGRPTEAQTAVLGAANMPTQRLDPRQVGAAAAVGQTRAMPAVDTPTGYQS
PAPRYEEGLDGPGGRPPGPPRRAEPRRAPEPEKSGRTGYIILAIAGIAAVIAAILLAK
SLLKSGGNASSKAAPDFGIGVKTFPQAQQMLAQPDYTGFSLTGSGKDCPPGTDVHSGN
AGTIIAQSPAAGAYGKPGPITYCLSLGPQNGKVPPKATLNGMNQDQLKAYLGGAHFDL
ANPLITSQPDPKVLAGNIIDVIDAGNNNAVLDGQQVPDVSKVQIGWIVSAGPSKIPLS
TQGYIGQPYNSVVSQIQGLGFTNVKPVVDNPGGNLPAGSVTRISPGDNSYTADTPIVV
YYAPQPVAPTTPTSSQSQGCDPNQDPTCQQNPTSTASGPGNGQTSSNPMLCVVDPNAP
GCPNAPTTSKKGGGGGGN"
misc_feature 40478..41236
/locus_tag="Caci_0038"
/note="Protein Kinases, catalytic domain; Region:
PKc_like; cl09925"
/db_xref="CDD:245201"
misc_feature 40481..41266
/locus_tag="Caci_0038"
/note="Serine/Threonine protein kinases, catalytic domain;
Region: S_TKc; smart00220"
/db_xref="CDD:214567"
misc_feature order(40499..40513,40523..40525,40562..40564,40568..40570,
40664..40666,40724..40735,40745..40747,40751..40753,
40862..40864,40868..40870,40874..40879,40883..40885,
40916..40918,40925..40927,40982..40993)
/locus_tag="Caci_0038"
/note="active site"
/db_xref="CDD:173623"
misc_feature order(40499..40513,40523..40525,40562..40564,40568..40570,
40664..40666,40724..40735,40745..40747,40862..40864,
40868..40870,40874..40879,40883..40885,40916..40918)
/locus_tag="Caci_0038"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:173623"
misc_feature order(40511..40513,40745..40747,40751..40753,40862..40864,
40868..40870,40874..40876,40925..40927,40982..40993)
/locus_tag="Caci_0038"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173623"
misc_feature order(40913..40933,40982..40993)
/locus_tag="Caci_0038"
/note="activation loop (A-loop); other site"
/db_xref="CDD:173623"
gene complement(42621..43256)
/locus_tag="Caci_0039"
/db_xref="GeneID:8331364"
CDS complement(42621..43256)
/locus_tag="Caci_0039"
/inference="protein motif:TFAM:TIGR00566"
/note="aminodeoxychorismate synthase subunit PabA; with
PabB catalyzes the formation of 4-amino-4-deoxychorismate
from chorismate and glutamine in para-aminobenzoate
synthesis; PabA provides the glutamine amidotransferase
activity"
/codon_start=1
/transl_table=11
/product="para-aminobenzoate synthase component II"
/protein_id="YP_003110835.1"
/db_xref="GI:256389271"
/db_xref="InterPro:IPR000991"
/db_xref="InterPro:IPR001317"
/db_xref="InterPro:IPR006220"
/db_xref="InterPro:IPR006221"
/db_xref="InterPro:IPR011702"
/db_xref="GeneID:8331364"
/translation="MAARILVVDNYDSFVYNLVQYLYQLGAECEVVRNDAIGVEAAHD
YDGVLLSPGPGTPEEAGVCVAMTGYAEQHRIPVFGVCLGLQSIAVAHGAVVGRAPELL
HGKTSKVTHDGAGVFQGLPDPFTATRYHSLAIEPETLPQDLLVTARTDSGVIMGIRHR
ELPVEAVQFHPESVLTEGGHRMLANWLTVCGDAGAVERSAGLAPVVLSAAN"
misc_feature complement(42696..43244)
/locus_tag="Caci_0039"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in Anthranilate synthase; Region:
GATase1_Anthranilate_Synthase; cd01743"
/db_xref="CDD:153214"
misc_feature complement(42696..43241)
/locus_tag="Caci_0039"
/note="Glutamine amidotransferase class-I; Region: GATase;
pfam00117"
/db_xref="CDD:215729"
misc_feature complement(order(42861..42872,43002..43004,43011..43016,
43092..43094,43098..43103))
/locus_tag="Caci_0039"
/note="glutamine binding [chemical binding]; other site"
/db_xref="CDD:153214"
misc_feature complement(order(42741..42743,42747..42749,43014..43016))
/locus_tag="Caci_0039"
/note="catalytic triad [active]"
/db_xref="CDD:153214"
gene complement(43286..43444)
/locus_tag="Caci_0040"
/db_xref="GeneID:8331365"
CDS complement(43286..43444)
/locus_tag="Caci_0040"
/inference="similar to AA sequence:KEGG:SCO3852"
/note="KEGG: sco:SCO3852 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110836.1"
/db_xref="GI:256389272"
/db_xref="GeneID:8331365"
/translation="MYAFVWRHLPGPVSVKILIALAIAALIVVLLFGWVFPWIEPLMP
FSGNTVSQ"
gene complement(43506..44222)
/locus_tag="Caci_0041"
/db_xref="GeneID:8331366"
CDS complement(43506..44222)
/locus_tag="Caci_0041"
/inference="protein motif:TFAM:TIGR01076"
/note="TIGRFAM: sortase family protein;
PFAM: peptidase C60 sortase A and B;
KEGG: kra:Krad_0027 sortase family protein"
/codon_start=1
/transl_table=11
/product="sortase family protein"
/protein_id="YP_003110837.1"
/db_xref="GI:256389273"
/db_xref="InterPro:IPR005754"
/db_xref="GeneID:8331366"
/translation="MWAESARTAIRSVGEILITLGLVLFLFCAYQLFYTNVVADEAMK
SEVSDLHKLWDAPVARAAAPRAANAFDTADSHGTAGAAFAILHIPRLGDKSIPVLQGT
TLDLLGRGVGHYKDSAMPGRTGNFAVAGHRKTHGEPFRYLDEMRDGDLIVVETADSWY
TYREDRDPFIVDPTDLGVVAPVPDHPGATPSRKLITLTTCNPWWASTQRMIVTGELIA
QQPRSAGEPPAMTVNAPKFQ"
misc_feature complement(43575..43985)
/locus_tag="Caci_0041"
/note="Sortase D (SrtD) is a membrane transpeptidase found
in gram-positive bacteria that anchors surface proteins to
peptidoglycans of the bacterial cell wall envelope. This
involves a transpeptidation reaction in which the surface
protein substrate is cleaved...; Region: Sortase_D_5;
cd05830"
/db_xref="CDD:99713"
misc_feature complement(order(43596..43598,43605..43607,43623..43628,
43830..43832,43836..43838,43842..43844,43878..43880,
43914..43916))
/locus_tag="Caci_0041"
/note="active site"
/db_xref="CDD:99713"
misc_feature complement(order(43596..43598,43623..43625,43830..43832))
/locus_tag="Caci_0041"
/note="catalytic site [active]"
/db_xref="CDD:99713"
gene complement(44241..45053)
/locus_tag="Caci_0042"
/db_xref="GeneID:8331367"
CDS complement(44241..45053)
/locus_tag="Caci_0042"
/inference="protein motif:PFAM:PF05949"
/note="PFAM: protein of unknown function DUF881;
KEGG: sgr:SGR_3719 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110838.1"
/db_xref="GI:256389274"
/db_xref="InterPro:IPR010273"
/db_xref="GeneID:8331367"
/translation="MASGRDQLDEPESADGPEPAGGPAPRPRSRVAWHTGVVLVFALA
GALFLTARDTADGQGDIRPDRGAQLSDVIRAQNTHNQQLTEQVAGQRADQDALTRGQS
ADARVKAVQDQVDALAAPVALTPVSGSALAVTLNDAPPNAQPAAGAPTAQPDWLIIHQ
QDVQAVVNALWAGGATGIQLMDQRLAPTSAVRCVGNTLLLQGRVYSPPYVITAVGDTA
KLRSSLLAAPAVQTYLEYVSAYGLGWDVKARDRVTLPGYTGPLDVSFASVAP"
misc_feature complement(44256..44723)
/locus_tag="Caci_0042"
/note="Bacterial protein of unknown function (DUF881);
Region: DUF881; pfam05949"
/db_xref="CDD:218822"
gene 45132..45386
/locus_tag="Caci_0043"
/db_xref="GeneID:8331368"
CDS 45132..45386
/locus_tag="Caci_0043"
/inference="protein motif:PFAM:PF06781"
/note="integral membrane protein involved in inhibition of
the Z-ring formation"
/codon_start=1
/transl_table=11
/product="septation inhibitor protein"
/protein_id="YP_003110839.1"
/db_xref="GI:256389275"
/db_xref="InterPro:IPR009619"
/db_xref="GeneID:8331368"
/translation="MPESKVRKKAAYTPPPDKKQPIKLDTGNRVVLPLMVGCFVLGLL
WIVIYYLSNMTYPVSALHGWNMAVGFGLIITGFIASMRWK"
misc_feature 45132..45383
/locus_tag="Caci_0043"
/note="putative septation inhibitor protein; Reviewed;
Region: PRK02251"
/db_xref="CDD:179394"
gene complement(45480..46550)
/locus_tag="Caci_0044"
/db_xref="GeneID:8331369"
CDS complement(45480..46550)
/locus_tag="Caci_0044"
/inference="protein motif:PFAM:PF01694"
/note="PFAM: rhomboid family protein;
KEGG: ace:Acel_0013 rhomboid family protein"
/codon_start=1
/transl_table=11
/product="rhomboid family protein"
/protein_id="YP_003110840.1"
/db_xref="GI:256389276"
/db_xref="InterPro:IPR002610"
/db_xref="GeneID:8331369"
/translation="MPPGSPGSPSVPATELPACYRHPGREAQIRCTRCDRRICPECMV
PASVGFQCPECVRGGNQEVRKARSPFGAVLRPRVVPVVTYSLIALNFVMFGLQHIVGT
SQVGAAGGGVFQVNTLDMRLELIAKGTWVDGQPIGVANGEWYRLVTSMFLHANLIHIA
SNMISLFFIGPMLEAMLGRLRFVLVYLIGGLAGAVTSYWFMTPLSPASLGASGAISAV
FGCLVVIGLRRKILDPGMIAVVLVINIVIPLQNTNIDWRDHVGGVVAGALIGAVYAFA
PELIGALGKARAPREQQVRLLNWLGFGTMALVLALAIGGTAVHTAHLNDPANRTRTVD
GAVYSPGPTRVVTDVPTSYPQA"
misc_feature complement(<46419..46496)
/locus_tag="Caci_0044"
/note="B-Box-type zinc finger; zinc binding domain
(CHC3H2); often present in combination with other motifs,
like RING zinc finger, NHL motif, coiled-coil or RFP
domain in functionally unrelated proteins, most likely
mediating protein-protein interaction; Region: BBOX;
cl00034"
/db_xref="CDD:241563"
misc_feature complement(<45804..46139)
/locus_tag="Caci_0044"
/note="Rhomboid family; Region: Rhomboid; pfam01694"
/db_xref="CDD:216649"
gene complement(46660..47241)
/locus_tag="Caci_0045"
/db_xref="GeneID:8331370"
CDS complement(46660..47241)
/locus_tag="Caci_0045"
/EC_number="5.2.1.8"
/inference="protein motif:PRIAM:5.2.1.8"
/note="PFAM: peptidyl-prolyl cis-trans isomerase
cyclophilin type;
KEGG: krh:KRH_00110 peptidyl-prolyl cis-trans isomerase"
/codon_start=1
/transl_table=11
/product="peptidyl-prolyl isomerase"
/protein_id="YP_003110841.1"
/db_xref="GI:256389277"
/db_xref="InterPro:IPR002130"
/db_xref="GeneID:8331370"
/translation="MTETERQQTVAENLYATIKTNHGDIVVRLLPDYAPKTVANFVGL
AEGTREWTHPETNVTSTTPLYDGTIFHRIIPQFMIQGGDPLGQGFGGPGYVFDDEPHP
DQTFNDRDYLLAMANAGIRNGKGTNGSQFFITVPTPRRPTHLNGKHTIFGEVVDADSR
KVVDEIAGVRTGAQDRPVNDVVIEKISIERREG"
misc_feature complement(46687..47193)
/locus_tag="Caci_0045"
/note="cyclophilin: cyclophilin-type peptidylprolyl cis-
trans isomerases. This family contains eukaryotic,
bacterial and archeal proteins which exhibit a
peptidylprolyl cis- trans isomerases activity (PPIase,
Rotamase) and in addition bind the...; Region:
cyclophilin; cd00317"
/db_xref="CDD:238194"
misc_feature complement(order(46798..46800,46810..46815,46846..46848,
46852..46854,46891..46896,47008..47013,47020..47022,
47026..47028))
/locus_tag="Caci_0045"
/note="active site"
/db_xref="CDD:238194"
gene 47443..48078
/locus_tag="Caci_0046"
/db_xref="GeneID:8331371"
CDS 47443..48078
/locus_tag="Caci_0046"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: CG31952"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110842.1"
/db_xref="GI:256389278"
/db_xref="GeneID:8331371"
/translation="MPFSHDEPASRVERVRCAVRDRTSGAAHTVSGAAGTAQSAAVTA
AGVAQGTAHQVADRATVVGQQVADRATVVAHQVADRTTVAAAAMADRARPVAAEAASR
GGAAWQVIRYGAPQPSPLARMATVIPLATVTTAARRSRAPLALMAIGAACAVGILWWR
RSRTGPDSVWILDSDSDVEPVGRWQERDNRADADDSGMDTSRRDSPANRWP"
gene complement(48321..49223)
/locus_tag="Caci_0047"
/db_xref="GeneID:8331372"
CDS complement(48321..49223)
/locus_tag="Caci_0047"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sco:SCO3551 membrane spanning protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110843.1"
/db_xref="GI:256389279"
/db_xref="GeneID:8331372"
/translation="MPPPNPARDRGSATIYAALLTGLLTTLTGAILALGTAILARHRA
GSAADLAALSAATHATPGQIPCDWARRVTTAHHTRLLHCTCNGPTCLVTTAINTPWGA
ATVTSRAGPADDPTGETTAGQNALRAEGTRLAEAAMGLRAAALSDPVGERIAGIERTR
LGEATGGSLRTAAMTSRTHDPVGERTVEVERSSRAKPQATAPRAANLVGRTGLTHGLV
GPSLVGIERSTYAEAYPFGKRASGIAARLTTPAVASRPRPSPHRAPVVPAAPLVGVRL
AVAESEPLAGSSAASCCQLGAALP"
gene complement(49198..49590)
/locus_tag="Caci_0048"
/db_xref="GeneID:8331373"
CDS complement(49198..49590)
/locus_tag="Caci_0048"
/inference="similar to AA sequence:KEGG:SGR_3310"
/note="KEGG: sgr:SGR_3310 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110844.1"
/db_xref="GI:256389280"
/db_xref="GeneID:8331373"
/translation="MRRRRPRDAGYATVEAALAIPSLVLFTVALAGILTGLATQIRCV
DAARLGARAAARGEPAAQIQGAVTQAAPGSSIHITTENGLIHVSVAAPVAAMPLLRAF
TVHAEAYEADEATLEGGEEPHAAAEPRP"
sig_peptide complement(49495..49590)
/locus_tag="Caci_0048"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.896) with cleavage site probability 0.890 at
residue 32"
gene complement(49590..49766)
/locus_tag="Caci_0049"
/db_xref="GeneID:8331374"
CDS complement(49590..49766)
/locus_tag="Caci_0049"
/inference="similar to AA sequence:KEGG:Acel_1979"
/note="KEGG: ace:Acel_1979 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110845.1"
/db_xref="GI:256389281"
/db_xref="GeneID:8331374"
/translation="MERARRRLRRDDGMSTVEYTLGTLAACAFAVILYKVITSPMVQE
ALSGVLRKALNTAF"
misc_feature complement(49602..>49736)
/locus_tag="Caci_0049"
/note="Protein of unknown function (DUF4244); Region:
DUF4244; pfam14029"
/db_xref="CDD:206199"
gene complement(49782..50486)
/locus_tag="Caci_0050"
/db_xref="GeneID:8331375"
CDS complement(49782..50486)
/locus_tag="Caci_0050"
/inference="protein motif:PFAM:PF00482"
/note="PFAM: type II secretion system protein;
KEGG: sgr:SGR_3318 hypothetical protein"
/codon_start=1
/transl_table=11
/product="type II secretion system protein"
/protein_id="YP_003110846.1"
/db_xref="GI:256389282"
/db_xref="InterPro:IPR001992"
/db_xref="GeneID:8331375"
/translation="MSVLGVAFTGVVAGVSAGLSVLCWPPRQQGHPARRLAFLATRNT
TADHTRSRPWSAFLKRLRNNPWSTARHQRQHSEATARISPVAADLLAACLASGADPLR
AAEVVAYCLRPPGRLGTLGERAAAEMADRFQEVAHLLRLGGNPITTWRVVAAEPGLRP
VAEAIGRAGLSGAPPVASIRACATDLRKERHAASTAAARRAGVRGVAPLAGCFLPAFV
LIGVTPIVLGLAHHLL"
misc_feature complement(<49917..50231)
/locus_tag="Caci_0050"
/note="Type II secretion system (T2SS), protein F; Region:
T2SF; pfam00482"
/db_xref="CDD:215939"
gene complement(50483..51295)
/locus_tag="Caci_0051"
/db_xref="GeneID:8331376"
CDS complement(50483..51295)
/locus_tag="Caci_0051"
/inference="similar to AA sequence:KEGG:SCO3555"
/note="KEGG: sco:SCO3555 integral membrane protein"
/codon_start=1
/transl_table=11
/product="integral membrane protein"
/protein_id="YP_003110847.1"
/db_xref="GI:256389283"
/db_xref="GeneID:8331376"
/translation="MNSALAGLLAASAVLAFPGPGARRRLETAVLGAPRGPKWRLRMA
GAWPTVLSAIALGVLSALLARSMVLAFLVPFGAWRAYRAWTAHTARLAVERRQTEIIE
LCVTICSELHAGREAREALRDAAVGACPDLAVHLVGPLGTGDDVVTVLRTAAGTPGRE
ALAALAACWQVAEGGAGMTAAIGELSDGLRAERAQRRELDAELAGIRTSARLLAMLPV
VGLIIGSGMGLSPIPMLLHTGVGETCLVLGIAFVLGGVMWMDRIARSAEALS"
sig_peptide complement(51245..51295)
/locus_tag="Caci_0051"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.996) with cleavage site probability 0.989 at
residue 17"
misc_feature complement(50498..>51235)
/locus_tag="Caci_0051"
/note="Flp pilus assembly protein TadB [Intracellular
trafficking and secretion]; Region: TadB; COG4965"
/db_xref="CDD:227300"
gene complement(51292..52770)
/locus_tag="Caci_0052"
/db_xref="GeneID:8331377"
CDS complement(51292..52770)
/locus_tag="Caci_0052"
/inference="protein motif:PFAM:PF00437"
/note="PFAM: type II secretion system protein E;
KEGG: sco:SCO3556 secretory protein"
/codon_start=1
/transl_table=11
/product="type II secretion system protein E"
/protein_id="YP_003110848.1"
/db_xref="GI:256389284"
/db_xref="InterPro:IPR001482"
/db_xref="GeneID:8331377"
/translation="MNALSSSPMSMPSPMSSPSPMSSPSPLSPVPLPGAERLRLNAAL
VDRVRTRLATPPVRVDMQAILAALRAEGCMLDGRDLRAAAYQVRSELTGAGVLDRYLA
DPEVTDVLVNAPDSVWIERAGTLSRADVRFPDEAAVRRLAQRLAAHAGRRLDDAAPCV
DGILPDGARLHAVLPPIAARGTLISLRVPPRRAFTVDQLTAGGLTTEHGARLLRAVAS
EKVSYLVTGGTGSGKTTLLGALLGLVPGDERIVITEECTEVVVDHPHVARLQCRIANQ
ENRGAVNLRTLVRQALRMRPDRVVVGEVRGPEVLELLAAMNTGHDGCAATMHANGVED
VVARVEALAAPAGMERSALHAQLNSAVQVVVHLVRDKGKRRLASIGVIDRGFGETEVL
PAVDFDDTGKATYGPGSDRLSFLLGFEVRESTDEAPKAKPPPPRLPVDDLEKLAGWEE
ALAVADRLLPVLKNAANGGDSHVDEPFVADYGPSPTRRGGHR"
misc_feature complement(51628..52641)
/locus_tag="Caci_0052"
/note="RecA-like NTPases. This family includes the NTP
binding domain of F1 and V1 H+ATPases, DnaB and related
helicases as well as bacterial RecA and related eukaryotic
and archaeal recombinases. This group also includes
bacterial conjugation proteins and...; Region:
RecA-like_NTPases; cl17233"
/db_xref="CDD:247787"
misc_feature complement(51562..52581)
/locus_tag="Caci_0052"
/note="Flp pilus assembly protein, ATPase CpaF
[Intracellular trafficking and secretion]; Region: CpaF;
COG4962"
/db_xref="CDD:227297"
misc_feature complement(order(52069..52077,52087..52092))
/locus_tag="Caci_0052"
/note="Walker A motif; other site"
/db_xref="CDD:238540"
misc_feature complement(order(51862..51867,52006..52011,52015..52017,
52069..52077,52087..52089))
/locus_tag="Caci_0052"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238540"
misc_feature complement(51865..51879)
/locus_tag="Caci_0052"
/note="Walker B motif; other site"
/db_xref="CDD:238540"
gene complement(52767..54476)
/locus_tag="Caci_0053"
/db_xref="GeneID:8331378"
CDS complement(52767..54476)
/locus_tag="Caci_0053"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: tfu:Tfu_0129 septum site determining
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110849.1"
/db_xref="GI:256389285"
/db_xref="InterPro:IPR013838"
/db_xref="GeneID:8331378"
/translation="MRDLTQHPVPGRPGRPRRPDPAPPPGRGPAPAAAPLAVTADPAL
ADALLRVAAEAGVRIEIVPGPSAARHRWSAAPLVLIGVDQTGEVARAGLPHRPDVALI
GRDLDDASVWQRGSAVGAAHVLILPDCERWLAGMLAEADSPREEPGAVVAVLSGRGGA
GGSTLAAALALAGVRRGLRSTLVDLDPAGGGIDLLFGLETEPGPRWSELAQWRDGRLS
GRSLRDALPTYAAHSRHGLAAGLGLAEEGADRLPVLAWPRARPGEDDGPGWLGARPTV
AEDPWYDSGAPADPGKADPWLPQDSAPSGGDIAAGSANPLYGAGSPDIAEDLWSGGGS
SRRQETVGPRTGGGRFNADGSSAESLSRTRLIALENSDSEVSTEVDDGSRDRDRVADA
ARATARPQHGLPILTYPHTRADLPLPAVAAEPVRAVLTALAQAGDLVVVDLPRSLDEA
ATEALALANVTLMLVPAEVRASAAASQLAAAVRLVSPDLRVVVRLPAPGGLEPLDITD
VMGGLPLAGVIGADRRLSAAAEHGEPPGSSARGTVSAFCRTFLDDLFGVASGRRSESR
AAA"
misc_feature complement(<53688..54311)
/locus_tag="Caci_0053"
/note="helicase/secretion neighborhood CpaE-like protein;
Region: CpaE_hom_Actino; TIGR03815"
/db_xref="CDD:234363"
gene 55176..56021
/locus_tag="Caci_0054"
/db_xref="GeneID:8331379"
CDS 55176..56021
/locus_tag="Caci_0054"
/inference="protein motif:TFAM:TIGR01490"
/note="TIGRFAM: HAD-superfamily subfamily IB hydrolase,
TIGR01490; HAD-superfamily hydrolase, subfamily IB
(PSPase- like);
PFAM: haloacid dehalogenase;
KEGG: sma:SAV_4604 morphological differentiation-
associated protein"
/codon_start=1
/transl_table=11
/product="HAD-superfamily hydrolase"
/protein_id="YP_003110850.1"
/db_xref="GI:256389286"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006383"
/db_xref="InterPro:IPR006385"
/db_xref="GeneID:8331379"
/translation="MDEHADARADGAGRPAAFFDLDKTIIAKSSTLAFGRSFYNGGLI
NRRTVLRTAYAQFVYLAGGADHDQMERMRQFLSAMATGWDVEQVKEIVAETLHDLIDP
LIYSEAAALIAEHKAAGRDVVIVSTSGSEVVEPIAEMLGADLAIGTRMAVGEDGKYSG
EIEFYAYAENKAKAIVELAAERGYDLTRSFAYSDSATDVPMLESVGHPYAVNPDRTLR
KEATAREWPILVFDKPVALRSRVGELAAKPAVSGTALGLALATAGTIWWLGTRGRRRR
GSGLL"
misc_feature 55233..55859
/locus_tag="Caci_0054"
/note="Phosphoserine phosphatase [Amino acid transport and
metabolism]; Region: SerB; COG0560"
/db_xref="CDD:223634"
misc_feature 55233..55826
/locus_tag="Caci_0054"
/note="haloacid dehalogenase-like hydrolase; Region: HAD;
cl17202"
/db_xref="CDD:247756"
gene complement(56106..57116)
/locus_tag="Caci_0055"
/db_xref="GeneID:8331380"
CDS complement(56106..57116)
/locus_tag="Caci_0055"
/inference="protein motif:PFAM:PF02254"
/note="PFAM: TrkA-N domain protein; ion transport 2 domain
protein;
KEGG: sma:SAV_4367 hypothetical protein"
/codon_start=1
/transl_table=11
/product="TrkA-N domain-containing protein"
/protein_id="YP_003110851.1"
/db_xref="GI:256389287"
/db_xref="InterPro:IPR003148"
/db_xref="InterPro:IPR013099"
/db_xref="GeneID:8331380"
/translation="MLPRAVPGPLRAVLKRVLLALGILVLSAVIVYLGRDGYRDSSGK
PIGWLTSFYYATVTLSTTGYGDVVPVSDSARLISTLFVTPLRVLFLLVLVGTTLEVLT
ERTRNEWRQERWRSKVRDHTVVVGYGTKGSSAVQTLLKHGTTPESIVVVDTDPARIAE
ANRRGLVGIVGDGSRSEVLERAEISKARHVVISAERDDTAVLTTLTVRRLTRRATVVA
SVREAENAPLLRESGASSVVTSSDTAGQLLGMATISPKVSQVVHDLLSHGEGLELLER
PADTGDVDKDPRALKEPVLAVIRGSRTMRFDDVAIGTIQLTDRLVVVRSVHNRRTDPG
RR"
misc_feature complement(<56883..57050)
/locus_tag="Caci_0055"
/note="Ion channel; Region: Ion_trans_2; pfam07885"
/db_xref="CDD:219619"
misc_feature complement(<56328..56750)
/locus_tag="Caci_0055"
/note="K+ transport systems, NAD-binding component
[Inorganic ion transport and metabolism]; Region: TrkA;
COG0569"
/db_xref="CDD:223643"
misc_feature complement(56400..56750)
/locus_tag="Caci_0055"
/note="TrkA-N domain; Region: TrkA_N; pfam02254"
/db_xref="CDD:216949"
gene complement(57158..58456)
/locus_tag="Caci_0056"
/db_xref="GeneID:8331381"
CDS complement(57158..58456)
/locus_tag="Caci_0056"
/inference="protein motif:PFAM:PF03453"
/note="PFAM: MoeA domain protein domain I and II; MoeA
domain protein domain IV; molybdopterin binding domain;
KEGG: sco:SCO3827 molybdenum cofactor biosynthesis
protein"
/codon_start=1
/transl_table=11
/product="MoeA domain-containing protein domain I and II"
/protein_id="YP_003110852.1"
/db_xref="GI:256389288"
/db_xref="InterPro:IPR001453"
/db_xref="InterPro:IPR005110"
/db_xref="InterPro:IPR005111"
/db_xref="GeneID:8331381"
/translation="MSTSWAEARKIAGAAAIPLPVTRVPLAQARGTVLAESLSALVDL
PPFATSAMDGWAVAGPGPWRVTGRVLAGQEATRLGDGEAVEIATGARMPSGAEAVLRR
ERGYVDAHSRLHVGEKGDDQDGPNHGASAAATTAAAPQRFYAAVTSGTTATRTPRGAE
LGLPIGADIRPQGQESRRGETLLSAGTRVTPAVLGLAAAAGYDDLPVHERPRVALVVI
GDELAGSGLPDGARIRDALGPMFTAWLDALGVEVTVSRVADDPRELLAVVASSPADLV
ITTGGTARGPVDHVHRVLAELGARLLIDGVSVRPGHPMLLAQYGGTRQHRRFVAGLPG
NPLAAVAGFVTVVRPLLRRLAGLADTSHFLPLGDAVPTHPTDTRLVPVSVTEASAVPL
RFTGPAMLRGLALADGLAVVPPGGGVVALGAGQRVEVLTV"
misc_feature complement(57236..58405)
/locus_tag="Caci_0056"
/note="MoeA family. Members of this family are involved in
biosynthesis of the molybdenum cofactor (MoCF), an
essential cofactor of a diverse group of redox enzymes.
MoCF biosynthesis is an evolutionarily conserved pathway
present in eubacteria, archaea and...; Region: MoeA;
cd00887"
/db_xref="CDD:238452"
misc_feature complement(57236..58405)
/locus_tag="Caci_0056"
/note="Molybdopterin biosynthesis enzyme [Coenzyme
metabolism]; Region: MoeA; COG0303"
/db_xref="CDD:223380"
misc_feature complement(order(57263..57265,57740..57742,57749..57751,
57755..57757,57854..57856,57860..57865,57872..57874,
57878..57889,57932..57934,58376..58378))
/locus_tag="Caci_0056"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238452"
misc_feature complement(order(57614..57616,57680..57682,57794..57796,
57800..57805))
/locus_tag="Caci_0056"
/note="putative functional site; other site"
/db_xref="CDD:238452"
misc_feature complement(order(57434..57436,57443..57445,57455..57460,
57608..57616))
/locus_tag="Caci_0056"
/note="putative MPT binding site; other site"
/db_xref="CDD:238452"
gene complement(58453..59514)
/locus_tag="Caci_0057"
/db_xref="GeneID:8331382"
CDS complement(58453..59514)
/locus_tag="Caci_0057"
/inference="similar to AA sequence:KEGG:SAV_4365"
/note="KEGG: sma:SAV_4365 molybdopterin-guanine
dinucleotide biosynthesis protein"
/codon_start=1
/transl_table=11
/product="molybdopterin-guanine dinucleotide biosynthesis
protein"
/protein_id="YP_003110853.1"
/db_xref="GI:256389289"
/db_xref="GeneID:8331382"
/translation="MDRLSGPGEPFDVIVLAGGGARRLGGTDKPALEIGGVSLLDRVL
AACEGAASVAVVGPPRPVARQVVFTREFPPGGGPVPALAAGMTVGSAELVAVFAADMP
LLDEEAVTVLRRSLTADAVFFTDERGKDQPLAAIYRRNTLAAALDALPELRGARLFSV
VEGLDATRIPDTRGVTADCDTWEAVHAARALIATRPAAKAKMGDMDDKKLLADWCAAA
AAELGLTGHELAESDLDAILGLAGVAAHNVLRPAAPLTTFLAGYAVGLRSSAGGGRGA
LDGPIAKLSALAQAWDPAADGPAGTGHGGAASGTVGGSVAASPTAVRDATTGAAASAK
SSSGTSGDRAADAAGSGGQ"
misc_feature complement(59005..59436)
/locus_tag="Caci_0057"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:245596"
misc_feature complement(order(59215..59217,59221..59223,59356..59358))
/locus_tag="Caci_0057"
/note="active site"
/db_xref="CDD:132997"
gene 59678..60886
/locus_tag="Caci_0058"
/db_xref="GeneID:8331383"
CDS 59678..60886
/locus_tag="Caci_0058"
/inference="protein motif:PFAM:PF00441"
/note="PFAM: acyl-CoA dehydrogenase domain protein;
KEGG: sgr:SGR_6775 acyl-CoA dehydrogenase"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase domain-containing
protein"
/protein_id="YP_003110854.1"
/db_xref="GI:256389290"
/db_xref="InterPro:IPR006090"
/db_xref="InterPro:IPR006091"
/db_xref="InterPro:IPR006092"
/db_xref="GeneID:8331383"
/translation="MQPPEHLAYTPAQRALRAELRTYFAALVTEEVHRDLRLPDTATD
TARTLHRKLGADGWLGVGWPQEYGGRGLTPVEQFIFFDEAARAGCPMPLVALNTVGPT
LMRFGTQEQKDLLLPGILAGEIDVAAGYSEPGAGTDLASLTTRAVLTEDGSAYAVNGQ
KIFTTHGDSAEYVWLACRTDPDAPKHKGISILLVDTKDPGFEATKIHTIASHYTTATY
YRDVRVPVTMRVGAENAGWKLITTQLNHERVALAAVAQGVIRSFAKVQSWAMETPAAD
GKRVIDLPWVKTTMARAYIRISGLRLLNGQMVAALQKDQTGGHLSPADASAAKVHGTE
THIEALAELIQVLGAGGILKTGSPGALLAGDLEYLYRWAVTNTFGGGANEIQREIIAM
TGLAMPRVRR"
misc_feature 59696..60874
/locus_tag="Caci_0058"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:224871"
misc_feature 59708..60862
/locus_tag="Caci_0058"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:245208"
misc_feature order(59969..59971,60059..60061,60065..60067,60164..60166,
60170..60172,60809..60817,60821..60823,60827..60829)
/locus_tag="Caci_0058"
/note="active site"
/db_xref="CDD:173838"
gene 60895..61416
/locus_tag="Caci_0059"
/db_xref="GeneID:8331384"
CDS 60895..61416
/locus_tag="Caci_0059"
/inference="similar to AA sequence:KEGG:MSMEG_5992"
/note="KEGG: msm:MSMEG_5992 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110855.1"
/db_xref="GI:256389291"
/db_xref="GeneID:8331384"
/translation="METDPLYETVSAHIADPPSEPVPAWDPVNQPMIRHWCDAMGDDL
PIYTDAAAARAAGHPDVVAPPASLQAWTMPGLRMRGFEDGTTRAQAMLVEAGYRAVVA
TDCEQTYHRYLTIGDHLYATSRLDSVSPRKKTALGEGYFLTSVTEYRDQRGELLGEML
FRTLWFKPKEPAA"
misc_feature 60988..61371
/locus_tag="Caci_0059"
/note="Metal-binding domain of MaoC dehydratase; Region:
zf-MaoC; pfam13452"
/db_xref="CDD:222140"
misc_feature order(61084..61089,61219..61230)
/locus_tag="Caci_0059"
/note="active site 2 [active]"
/db_xref="CDD:239524"
misc_feature order(61117..61119,61126..61131,61138..61140,61174..61182)
/locus_tag="Caci_0059"
/note="active site 1 [active]"
/db_xref="CDD:239524"
gene 61413..61823
/locus_tag="Caci_0060"
/db_xref="GeneID:8331385"
CDS 61413..61823
/locus_tag="Caci_0060"
/inference="protein motif:PFAM:PF01796"
/note="PFAM: protein of unknown function DUF35;
KEGG: mpa:MAP2587 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110856.1"
/db_xref="GI:256389292"
/db_xref="InterPro:IPR002878"
/db_xref="GeneID:8331385"
/translation="MTRPLPVTGRDNAYYWEGVAKGDVLIQKCTACGSLRHPPSPMCP
DCQSLDWTTVKATGHAVLHSYTICHHPLPPWEEGPYAVVLIDLDMEDSDARPRIVCGT
RGIANEDLRIEMPLSLVFEDGLVFAGPAQEGGAP"
misc_feature 61458..61568
/locus_tag="Caci_0060"
/note="Rubredoxin-like zinc ribbon domain (DUF35_N);
Region: DUF35_N; pfam12172"
/db_xref="CDD:221453"
misc_feature 61572..61721
/locus_tag="Caci_0060"
/note="DUF35 OB-fold domain; Region: DUF35; pfam01796"
/db_xref="CDD:216707"
gene 61829..62908
/locus_tag="Caci_0061"
/db_xref="GeneID:8331386"
CDS 61829..62908
/locus_tag="Caci_0061"
/inference="protein motif:PFAM:PF00441"
/note="PFAM: acyl-CoA dehydrogenase domain protein; acyl-
CoA dehydrogenase type 2 domain;
KEGG: sgr:SGR_3736 acyl-CoA dehydrogenase"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase domain-containing
protein"
/protein_id="YP_003110857.1"
/db_xref="GI:256389293"
/db_xref="InterPro:IPR006090"
/db_xref="InterPro:IPR013107"
/db_xref="GeneID:8331386"
/translation="MDQPVDDALEAIGELSSEVFKDLDIETTRSPAYSNEAVSDEHDR
RLWRILADTGLLAAVLPASVGGGGTGLPGMVRLLSDAGAALARLPLVETFVAVSVIDE
KHLPAVLSGELVITAALAEHPSTITAPLRLTGQRLNGITQLVPYPLSSDLVLVPALRE
DDTEVLALVSLSTARVGDQVTTTGEPLGVLEFIDAEVMELCDAVGEARALAALFSSAT
LCGIAARALAMTAEYVGGRVQFGHPLATFQGVALSAADRYIDSRAMQAALWDAVYAIA
ENGISSPRARYAIATARVWAADGARRVVGSAQHLHGGFGVDVTYPLHRYHAWARYWEL
YGGSAEAWSGDLGELIAAHPIEEDQ"
misc_feature 61829..62848
/locus_tag="Caci_0061"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:224871"
misc_feature 62132..62848
/locus_tag="Caci_0061"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:245208"
misc_feature order(62177..62179,62183..62185,62255..62257,62261..62263,
62828..62836,62840..62842,62846..62848)
/locus_tag="Caci_0061"
/note="active site"
/db_xref="CDD:173838"
gene 62905..63306
/locus_tag="Caci_0062"
/db_xref="GeneID:8331387"
CDS 62905..63306
/locus_tag="Caci_0062"
/inference="protein motif:PFAM:PF01575"
/note="PFAM: MaoC domain protein dehydratase;
KEGG: rha:RHA1_ro05828 hypothetical protein"
/codon_start=1
/transl_table=11
/product="MaoC domain-containing protein dehydratase"
/protein_id="YP_003110858.1"
/db_xref="GI:256389294"
/db_xref="InterPro:IPR002539"
/db_xref="GeneID:8331387"
/translation="MSALPKVGEALPELIIPITPTRIVSGAIASRDYQDVHHDVPAAR
EKGSPDIFMNILTTNGLVGRYVTDWAGAEARILKIAIRLGVPNYPGDTMTLTGSVASV
GEDGAVEVAIRGANQLGNHVTGTVTLKGLGE"
misc_feature 62926..63291
/locus_tag="Caci_0062"
/note="SAV4209 is a Streptomyces avermitilis protein with
a hot dog fold that is similar to those of (R)-specific
enoyl-CoA hydratase, the peroxisomal
Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the
fatty acid synthase beta subunit. The alpha- and...;
Region: SAV4209; cd03455"
/db_xref="CDD:239539"
misc_feature order(62983..62985,62998..63000,63004..63006,63013..63015,
63058..63060,63067..63072)
/locus_tag="Caci_0062"
/note="putative active site [active]"
/db_xref="CDD:239539"
misc_feature order(62998..63000,63004..63006,63013..63015,63067..63069)
/locus_tag="Caci_0062"
/note="putative catalytic site [active]"
/db_xref="CDD:239539"
gene 63309..64481
/locus_tag="Caci_0063"
/db_xref="GeneID:8331388"
CDS 63309..64481
/locus_tag="Caci_0063"
/inference="similar to AA sequence:KEGG:nfa4530"
/note="KEGG: nfa:nfa4530 lipid-transfer protein"
/codon_start=1
/transl_table=11
/product="lipid-transfer protein"
/protein_id="YP_003110859.1"
/db_xref="GI:256389295"
/db_xref="GeneID:8331388"
/translation="MSLAGEAAIVGIGATEFSKESGRSELQLCLEACKAALDDAGIAP
RDVDGLVTFSMDSSPSIMVGRGLGVAELRHFSLVDYGGGAACATVAHAAAAITAGLAD
VVVCYRAFNERSGRRFGSGDAAIQARGESPMAQHFGYYSPYGLITPAAWVAMAARRYM
HKYGATSEDFGRVAVAARTHAATNPAAWFYERPITLADHQSSKLIADPVRLLDCCQES
DGGVALVVVSAERARDLPGKEVLIAGAAQGSAHDQQMMTSYYREDISGLPEMGTVARQ
LWNQSGLGPDDIQTAVIYDHFTPFVLTQLEEFGFCGRGEARDFIRDGAIHIGGRLPLN
THGGQLGEAYIHGMNGIAEAVRQARGTAVNQVPDVHNVLVTAGTGVPTSGLVLSAV"
misc_feature 63312..64472
/locus_tag="Caci_0063"
/note="lipid-transfer protein; Provisional; Region:
PRK07855"
/db_xref="CDD:181147"
misc_feature 63336..64469
/locus_tag="Caci_0063"
/note="Thiolase domain associated with sterol carrier
protein (SCP)-x isoform and related proteins; SCP-2 has
multiple roles in intracellular lipid circulation and
metabolism. The N-terminal presequence in the SCP-x
isoform represents a peroxisomal...; Region:
SCP-x_thiolase; cd00829"
/db_xref="CDD:238425"
misc_feature order(63552..63554,64188..64190,64338..64340)
/locus_tag="Caci_0063"
/note="active site"
/db_xref="CDD:238425"
gene 64495..65247
/locus_tag="Caci_0064"
/db_xref="GeneID:8331389"
CDS 64495..65247
/locus_tag="Caci_0064"
/inference="protein motif:TFAM:TIGR01549"
/note="TIGRFAM: HAD-superfamily hydrolase, subfamily IA,
variant 1;
PFAM: haloacid dehalogenase;
KEGG: sma:SAV_7535 hydrolase"
/codon_start=1
/transl_table=11
/product="HAD-superfamily hydrolase"
/protein_id="YP_003110860.1"
/db_xref="GI:256389296"
/db_xref="InterPro:IPR005833"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006439"
/db_xref="GeneID:8331389"
/translation="MSGDADPTGLSSTAATARNPVFRWASERSVNLGAMPRLALFDLD
DTLISSKGAFIAWTEELVAAHSSPADVRWFIDNEHIFWTGSPDDAFRGLVEHFGLAAD
PAELLADYQFRMVDLLKPFDGVLDGLEALRDAGWRIGIVTNGFGDFQNAKIDAVGLRA
YVDVVCISDVEGSWKPESKIFQLASERAGAPLEGGWMVGDSLSSDIAGGNGVGLHTAW
IRHGRTLGSMDPQPEQVVETTTEAFQLILSRP"
misc_feature 64606..>64929
/locus_tag="Caci_0064"
/note="haloacid dehalogenase-like hydrolase; Region: HAD;
cl17202"
/db_xref="CDD:247756"
misc_feature 64612..65151
/locus_tag="Caci_0064"
/note="Haloacid dehalogenase-like hydrolase; Region:
HAD_2; pfam13419"
/db_xref="CDD:222115"
misc_feature 64840..65151
/locus_tag="Caci_0064"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature 64918..64920
/locus_tag="Caci_0064"
/note="motif II; other site"
/db_xref="CDD:119389"
gene 65385..66143
/locus_tag="Caci_0065"
/db_xref="GeneID:8331390"
CDS 65385..66143
/locus_tag="Caci_0065"
/inference="protein motif:PFAM:PF07739"
/note="PFAM: TipAS antibiotic-recognition domain protein;
regulatory protein MerR;
SMART: regulatory protein MerR;
KEGG: sgr:SGR_941 MerR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="MerR family transcriptional regulator"
/protein_id="YP_003110861.1"
/db_xref="GI:256389297"
/db_xref="InterPro:IPR000551"
/db_xref="InterPro:IPR012925"
/db_xref="GeneID:8331390"
/translation="MSWSIAQVARMSGVTARTLRHYDDIGLLKPDHVGANGYRYYEEA
QLLRLQQILVLRELGLGLSEIAEAIDSEPDTIVALRRQYGRLLVERDRLSRVAETVRR
TIAELEGKPQMSVHINRPENLFEGFEESQYEDEARERWPEEFEQAQAKRATMTEEDLE
RWQREATAAMIRMAEFMAAGTPVDDPAVQDEVHQHYQGICIWWTPNRSAYKCVGQMYV
DDERFKANYLKIAEGLAEYQAAAMAAYADARLTD"
misc_feature 65391..65720
/locus_tag="Caci_0065"
/note="Predicted transcriptional regulators
[Transcription]; Region: SoxR; COG0789"
/db_xref="CDD:223860"
misc_feature 65391..65696
/locus_tag="Caci_0065"
/note="Helix-Turn-Helix DNA binding domain of the
transcription regulators TipAL, Mta, and SkgA; Region:
HTH_TipAL-Mta; cd01106"
/db_xref="CDD:133381"
misc_feature order(65394..65402,65442..65444,65493..65501)
/locus_tag="Caci_0065"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:133381"
misc_feature order(65535..65537,65544..65546,65556..65561,65586..65588,
65619..65621,65631..65633,65649..65651,65661..65663,
65670..65675)
/locus_tag="Caci_0065"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133381"
misc_feature 65775..66065
/locus_tag="Caci_0065"
/note="TipAS antibiotic-recognition domain; Region: TipAS;
pfam07739"
/db_xref="CDD:219546"
gene complement(66209..67510)
/locus_tag="Caci_0066"
/db_xref="GeneID:8331391"
CDS complement(66209..67510)
/locus_tag="Caci_0066"
/inference="protein motif:TFAM:TIGR00773"
/note="TIGRFAM: Na+/H+ antiporter NhaA;
PFAM: Na+/H+ antiporter NhaA; sodium/hydrogen exchanger;
KEGG: sgr:SGR_3327 sodium/proton antiporter"
/codon_start=1
/transl_table=11
/product="Na+/H+ antiporter NhaA"
/protein_id="YP_003110862.1"
/db_xref="GI:256389298"
/db_xref="InterPro:IPR001865"
/db_xref="InterPro:IPR004670"
/db_xref="InterPro:IPR006153"
/db_xref="GeneID:8331391"
/translation="MTPPDRPASPSRVFARLKRIERRHVAAVLRTETVGGALLIAFAL
LGLLWANSPWRASYDTVKNTVVGPHLWHLDLSLADWAADFLLAFFFLVAGIELKHELQ
AGELSNPRAAALPVVSALCGMIVPIGVYLAVSAGHTNAGEGWAVPTATDIAFALAVLA
VVGQNLPSALRAFLLTLAVVDDLGAIIIIAIAYTDSIDTGALVIAAVLLLAFYVVQRM
RITSLWLNVPLGLAIWIAVHASGVHATVAGVAIGLMLRGRRHGDSDEDHDDELQSPAE
KVQWRLQPFSAGFCVPVFAIMSAGVYVGGKTLGSLVSDQIPLAIAAGLFIGKAVGVFG
GAYLTARFTRAELSDELQWRDIAAVSALTGVGFTVSLLIAELGFSDSPDVLNLAKGGV
LLGSLASALFAVVLLRRRDRFYDQLCTAEESEDSELVLGRE"
misc_feature complement(66236..67450)
/locus_tag="Caci_0066"
/note="pH-dependent sodium/proton antiporter; Provisional;
Region: nhaA; PRK14853"
/db_xref="CDD:184855"
gene complement(67729..69684)
/locus_tag="Caci_0067"
/db_xref="GeneID:8331392"
CDS complement(67729..69684)
/locus_tag="Caci_0067"
/inference="protein motif:TFAM:TIGR02188"
/note="TIGRFAM: acetate/CoA ligase;
PFAM: AMP-dependent synthetase and ligase;
KEGG: sgr:SGR_3326 acetyl-CoA synthetase"
/codon_start=1
/transl_table=11
/product="acetate/CoA ligase"
/protein_id="YP_003110863.1"
/db_xref="GI:256389299"
/db_xref="InterPro:IPR000873"
/db_xref="InterPro:IPR011904"
/db_xref="GeneID:8331392"
/translation="MSNEALSNLLREDRRFAPSAAFAADANVKADAYAAAEADRLAFW
DTQASRLSWDTPWSETLDWSGMPVAKWFVGGKLNVAYNCVDRHVEAGNGDRVAIHFEG
EPGDSRAITYAELKDEVSKAANALTELGVRQGDRVAIYMPMIPETAVAMLACARIGAV
HSVVFAAFSPDALRARIEDAGAKLLITADGYHRRGGTVNLKANADEAVNGAETIENVL
VVKRTGADVAWGDKDVWWHDAVGGASTEHTPEAFDSENPLFILYTSGTTGKPKGILHT
TGGYLTQASYTHHAVFDLKPESDVYWCTADVGWVTGHSYIVYGPLSNGVTEVMYEGTP
DTPHQGRFWEIIQKYKVSLLYTAPTAIRMFAKWGDDIPAKFDLSSLRLLGSVGEPINP
EAWIWYRKNIGGDRTPVVDTWWQTETGAIMISPLPGVTEAKPGSAMRPLPGISANVVD
KDGNIVGNGHGGLLVLDKPWPSMARGIWGDQQRFIDTYWARFAEQGYYFAGDGAKKDE
DGDLWLLGRVDDIMLVSGHNISTTEVESALVSYPAVAEAAVVGAKDETTGQRIVAFVI
LRAGQEETEGLDAALKAHVSKEIGPIAKPKQIQIVPELPKTRSGKIMRRLLKDVAEDR
VVGDTTTLADSTVMDLIKAKLPHANED"
misc_feature complement(67750..69558)
/locus_tag="Caci_0067"
/note="acetyl-CoA synthetase; Provisional; Region:
PRK00174"
/db_xref="CDD:234677"
misc_feature complement(67783..69558)
/locus_tag="Caci_0067"
/note="Acetyl-CoA synthetase (also known as acetate-CoA
ligase and acetyl-activating enzyme); Region: ACS;
cd05966"
/db_xref="CDD:213313"
misc_feature complement(order(67909..67914,67927..67929,68101..68112,
68134..68136,68143..68145,68179..68181,68437..68454,
68518..68529,68596..68598,68605..68610,68680..68688,
68752..68757,68770..68772,69091..69093,69097..69099,
69106..69108,69184..69192))
/locus_tag="Caci_0067"
/note="active site"
/db_xref="CDD:213313"
misc_feature complement(order(67912..67914,67927..67929,68104..68112,
68596..68598,68605..68610,68680..68688,68752..68754,
68770..68772,69091..69093,69097..69099,69106..69108,
69184..69192))
/locus_tag="Caci_0067"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:213313"
misc_feature complement(order(68872..68877,68881..68898,68905..68907))
/locus_tag="Caci_0067"
/note="acyl-activating enzyme (AAE) consensus motif; other
site"
/db_xref="CDD:213313"
misc_feature complement(order(68101..68103,68134..68136,68143..68145,
68179..68181,68437..68454,68518..68529,68752..68757))
/locus_tag="Caci_0067"
/note="AMP binding site [chemical binding]; other site"
/db_xref="CDD:213313"
misc_feature complement(order(68443..68445,68524..68529,68752..68757))
/locus_tag="Caci_0067"
/note="acetate binding site [chemical binding]; other
site"
/db_xref="CDD:213313"
gene complement(70063..70797)
/locus_tag="Caci_0068"
/db_xref="GeneID:8331393"
CDS complement(70063..70797)
/locus_tag="Caci_0068"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; LytTr DNA-
binding region;
SMART: response regulator receiver;
KEGG: stp:Strop_4494 LytTr DNA-binding region"
/codon_start=1
/transl_table=11
/product="LytTR family two component transcriptional
regulator"
/protein_id="YP_003110864.1"
/db_xref="GI:256389300"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR007492"
/db_xref="GeneID:8331393"
/translation="MTIATPTGLRVLVVDDEPPAVAELAYLLSRDPRVSSVRTATDGE
DALRVLKNSPVDALFLDIRMPGLDGLEIAALLNQFATPPQIVFVTAHEEFALEAFDLH
ASDYILKPVRAERLAEALRRMTPASAPPRAPEAGPYDVIPVELAGVTRFIPRQEVSYA
EAQGDYVRLYTASSSHLVRIPLAVLEEHWSGAGFARTHRRFLVRVDAVSEARWESGHL
TVIVGGVPIPVARRHTREVRERLSHR"
misc_feature complement(70075..70773)
/locus_tag="Caci_0068"
/note="Response regulator of the LytR/AlgR family
[Transcription / Signal transduction mechanisms]; Region:
LytT; COG3279"
/db_xref="CDD:225818"
misc_feature complement(70465..70764)
/locus_tag="Caci_0068"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature complement(order(70468..70473,70480..70482,70531..70533,
70591..70593,70615..70617,70750..70755))
/locus_tag="Caci_0068"
/note="active site"
/db_xref="CDD:238088"
misc_feature complement(70615..70617)
/locus_tag="Caci_0068"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature complement(order(70591..70599,70603..70608))
/locus_tag="Caci_0068"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature complement(70465..70473)
/locus_tag="Caci_0068"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature complement(70078..70353)
/locus_tag="Caci_0068"
/note="LytTr DNA-binding domain; Region: LytTR;
smart00850"
/db_xref="CDD:197918"
gene complement(70820..72022)
/locus_tag="Caci_0069"
/db_xref="GeneID:8331394"
CDS complement(70820..72022)
/locus_tag="Caci_0069"
/inference="protein motif:PFAM:PF06580"
/note="PFAM: histidine kinase internal region; ATP-binding
region ATPase domain protein;
SMART: ATP-binding region ATPase domain protein;
KEGG: nca:Noca_0358 histidine kinase internal region"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase LytS"
/protein_id="YP_003110865.1"
/db_xref="GI:256389301"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR010559"
/db_xref="GeneID:8331394"
/translation="MASNPATVGIVAALVAPAVAVSRAVQRHRLAGTSAERAAYAAMH
AVALAGPPLRGGLTPDATRRAARHLRPLLGTAALAFNDTERTLTWDGAGQHRHSQDSY
ELSTTALKSGSVSVLGPEEVHCGSDSCMIRHAVVAPIIPPSSIGGIRADGGSTAIGTL
SVYSSSTSVALVRAVGEVAYWVATQIELAELDRSRTLLMETELRALRAQISPHFIYNS
LTAIASFTRTDPQRARELLLEFADFTRYSFRAHGEFTTLAEELRCVDRYLLLERARFG
ERLQVALRIAPEVLPVEVPFLCVQPIVENAVRHGLEGKPGPGHVTITAEPTRHDYRIT
VADDGVGITPDILRDALAPAEPGTRTSVGLSNVHERLRAVYGTAYGLAIESEPGAGTT
VVIRVPKK"
sig_peptide complement(71960..72022)
/locus_tag="Caci_0069"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.986) with cleavage site probability 0.882 at
residue 21"
misc_feature complement(70829..71464)
/locus_tag="Caci_0069"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG3920"
/db_xref="CDD:226434"
misc_feature complement(71180..71419)
/locus_tag="Caci_0069"
/note="Histidine kinase; Region: His_kinase; pfam06580"
/db_xref="CDD:203479"
misc_feature complement(70832..71128)
/locus_tag="Caci_0069"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature complement(order(70844..70846,70850..70855,70868..70870,
70874..70876,70931..70939,70997..71002,71006..71008,
71012..71014,71018..71020,71099..71101,71108..71110,
71120..71122))
/locus_tag="Caci_0069"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(71108..71110)
/locus_tag="Caci_0069"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(order(70934..70936,71000..71002,71006..71008))
/locus_tag="Caci_0069"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene 72113..72721
/locus_tag="Caci_0070"
/db_xref="GeneID:8331395"
CDS 72113..72721
/locus_tag="Caci_0070"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: nca:Noca_1231 TetR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003110866.1"
/db_xref="GI:256389302"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331395"
/translation="MNGRAIFLRVSKGEETRRQVLEAAVEVAASTGLASLTIGSLAER
AGMSKSGLFAHFKSKETLQVQVLEFASEAFVEDVVRPALSAPRGEKRITTLFESWLAV
SRDGTAECLFVSAAWEYDDQPGPVRDRLVRMHLDFNDSVAQMFRTGIAEGFFAADADP
EQFAHDLHGIMLIFFQAHRLLGDARAEERARSAFSRLIESNR"
misc_feature 72137..72661
/locus_tag="Caci_0070"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:224228"
misc_feature 72170..72298
/locus_tag="Caci_0070"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 72736..73662
/locus_tag="Caci_0071"
/db_xref="GeneID:8331396"
CDS 72736..73662
/locus_tag="Caci_0071"
/inference="similar to AA sequence:KEGG:Noca_1230"
/note="KEGG: nca:Noca_1230 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110867.1"
/db_xref="GI:256389303"
/db_xref="GeneID:8331396"
/translation="MAVSSSSGKKSTTVRAKKALGIGTVRTAFKVLEVVAPGPGARWA
ERLWLTVPKKPWRPRTPIAVSAGEPFTVTVRRSTVHGTVWGADGPLVYLMHGWGGVAA
QLDAFVEPLLAAGYRVVSFDAPGHGRSTESFAGPGLATLPEFSEALSSAVDRFGEAHA
VIAHSFGAAAAVLSVLDGLPVGRLVVVAPVSDPIGFSYEFAKMLGFRERIRTGFLRVL
EKRVGVSMDRFDIPQRMRDADLTTLPPLLIVHDLGDREVPVASGDRLAALWPGAELDT
WTSLGHFRILTDPDVVRKVTAFSSVPRTLPVP"
misc_feature 72973..>73122
/locus_tag="Caci_0071"
/note="Putative lysophospholipase; Region: Hydrolase_4;
pfam12146"
/db_xref="CDD:221442"
misc_feature 73006..73620
/locus_tag="Caci_0071"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:221720"
gene complement(73628..74605)
/locus_tag="Caci_0072"
/db_xref="GeneID:8331397"
CDS complement(73628..74605)
/locus_tag="Caci_0072"
/inference="similar to AA sequence:KEGG:SGR_3324"
/note="KEGG: sgr:SGR_3324 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110868.1"
/db_xref="GI:256389304"
/db_xref="GeneID:8331397"
/translation="MRIALVGKGGSGKTTVSALLIRHLAAGGRPVLAVDADINQHLGG
ALGLSEEQAAALSPMAAHLPAIKDYLRGENPLISGTEAMVKTTPPGRGSRLLRLEEEN
AVHSLCATRLPGDMENVRLMVTGGFEEKDLGVSCYHSKIGAAELYLNHLVDGPDEYLV
MDMTAGADAFASGLFTRFDLTCLVVEPTRKSVSVYQQYREYAKEYDVTIRVVGNKVTG
PDDVAYLREHTGADLVACLSASHYVRAQEQGRDKGFDTLEPANRTALARLQLEVDAVP
QDWAKFTRQAVHFHLKNAHAWGDRATGVDLGAQVDPDFVMGPEAFAAQS"
misc_feature complement(74051..74602)
/locus_tag="Caci_0072"
/note="The accessory protein CooC, which contains a
nucleotide-binding domain (P-loop) near the N-terminus,
participates in the maturation of the nickel center of
carbon monoxide dehydrogenase (CODH). CODH from
Rhodospirillum rubrum catalyzes the reversible...; Region:
CooC; cd02034"
/db_xref="CDD:238991"
misc_feature complement(74564..74587)
/locus_tag="Caci_0072"
/note="P-loop; other site"
/db_xref="CDD:238991"
gene 74795..75577
/locus_tag="Caci_0073"
/db_xref="GeneID:8331398"
CDS 74795..75577
/locus_tag="Caci_0073"
/inference="similar to AA sequence:KEGG:SAV_4603"
/note="KEGG: sma:SAV_4603 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110869.1"
/db_xref="GI:256389305"
/db_xref="GeneID:8331398"
/translation="MDTRSPIQRLAAAPNAAEAADTAREAVDRVRRHKVLRSQSARVT
AESQLRGARASAALGSLSEAGTDWPLEEVRRRTDLGDEDGSGLLRGALRISGELGTLA
PVWKRSPIQALSRMHLLAAAGHLDQDRVGRPSGPEAAVTLTTLANELRDPAAAEVPAV
VVAAAVHAELLVNEPFGWGDGLLARAASRLILADRGLDPQSLAVVEAGHVDVGVEKYL
DAARDYATGTEEGLATWLGLYAEAVELGARESLAVCEAIMRG"
gene complement(75654..76394)
/locus_tag="Caci_0074"
/db_xref="GeneID:8331399"
CDS complement(75654..76394)
/locus_tag="Caci_0074"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR
domain protein;
KEGG: ank:AnaeK_2958 short-chain dehydrogenase/reductase
SDR"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_003110870.1"
/db_xref="GI:256389306"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8331399"
/translation="MSAQGKFTGKTVYVIGASHGIGEGIAAAFAGGGADVLITGRAKE
RLDAAAERIGHPVRVVQSDATRQEDVDALFAAADTKIDHLVLAVSGGMAGLGPLAELT
DEALREGFESKVFAQFRVLKAALPHLAPDASVTFIGAGSSRAAFPGTTALAAANGALD
AAVRPLAAELAPVRVNAVSPGVIDTAWWHPLGENRDGFMEQQAAATPVGRVGQPQDIA
EAVLFLAGNGFTTGVVLDVNGGTTLARG"
misc_feature complement(75663..76355)
/locus_tag="Caci_0074"
/note="short chain dehydrogenase; Provisional; Region:
PRK07041"
/db_xref="CDD:235914"
misc_feature complement(75681..76355)
/locus_tag="Caci_0074"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(75837..75842,75846..75857,75927..75929,
75939..75941,75978..75986,76059..76061,76122..76124,
76131..76136,76203..76211,76269..76277,76332..76343,
76347..76349))
/locus_tag="Caci_0074"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(75927..75929,75939..75941,75978..75980,
76056..76058))
/locus_tag="Caci_0074"
/note="active site"
/db_xref="CDD:212491"
gene 76491..77075
/locus_tag="Caci_0075"
/db_xref="GeneID:8331400"
CDS 76491..77075
/locus_tag="Caci_0075"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: fal:FRAAL3321 2,4-DAPG biosynthesis transcriptional
repressor PhlF"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003110871.1"
/db_xref="GI:256389307"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331400"
/translation="MERPHTGRRRNEAAREAIIDAAIGLLQEVGYEGFTIERLARDAG
VGKQTVYRWWPSKAAVIAEAVGTRAQHTIPLPDTGTLAADLREFFETTFRQSEDPKVI
SELKSMMVASIENPESARPFHDFLASRRATLRVLLERGSARAEVAADADLDFLTDLAY
GLLWYRGLVGHRPLDDDAARKLAGALVAAAAESQ"
misc_feature 76563..>76925
/locus_tag="Caci_0075"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:224228"
misc_feature 76563..76682
/locus_tag="Caci_0075"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 77516..78517
/locus_tag="Caci_0076"
/db_xref="GeneID:8331401"
CDS 77516..78517
/locus_tag="Caci_0076"
/inference="protein motif:TFAM:TIGR02824"
/note="TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3
family;
PFAM: alcohol dehydrogenase zinc-binding domain protein;
alcohol dehydrogenase GroES domain protein;
KEGG: sco:SCO3823 quinone oxidoreductase"
/codon_start=1
/transl_table=11
/product="NAD(P)H quinone oxidoreductase"
/protein_id="YP_003110872.1"
/db_xref="GI:256389308"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="InterPro:IPR014189"
/db_xref="GeneID:8331401"
/translation="MRAITIAEPGGPEQLVWTEVPDPVVAAGEVLIQVAATAVNRADI
LQRRGFYTPPPGASSYPGLECSGRVVEVGAGVSGFVPGDEVVALLTGGGYAELVAVPA
GQVAPLPKGLSALAAGGLMETVCTVWSNVFMLAGLQAGQTLLVHGGSSGIGTTAIQLA
HQLGARVIVTAGTAAKLRACRDLGADVGVNYRDEDFVERVAEVTDGQGVDVILDNMGA
VYLDRNVQALAVDGRLVIIGLQGGVTGEVNLNTLLRKRAGISATTLRARPSEEKARIV
AAARDAVWPLIEQGRFRVVVDRVLPVDRAAEAHRVVEDSGHVGKVVLDVATVRGSSS"
misc_feature 77516..78490
/locus_tag="Caci_0076"
/note="putative NAD(P)H quinone oxidoreductase, PIG3
family; Region: quinone_pig3; TIGR02824"
/db_xref="CDD:234027"
misc_feature 77516..78484
/locus_tag="Caci_0076"
/note="PIG3 p53-inducible quinone oxidoreductase; Region:
p53_inducible_oxidoreductase; cd05276"
/db_xref="CDD:176180"
misc_feature order(77633..77638,77879..77881,77891..77893,77900..77902,
77954..77956,77963..77971,78026..78031,78041..78043,
78086..78088,78158..78163,78224..78229,78233..78235,
78299..78307,78449..78451,78464..78466)
/locus_tag="Caci_0076"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:176180"
gene 78533..79129
/locus_tag="Caci_0077"
/db_xref="GeneID:8331402"
CDS 78533..79129
/locus_tag="Caci_0077"
/inference="similar to AA sequence:KEGG:SGR_3755"
/note="KEGG: sgr:SGR_3755 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110873.1"
/db_xref="GI:256389309"
/db_xref="GeneID:8331402"
/translation="MTGLNGDIFGAMNMSLNNDPDADHDGDLAGRVIVVPADAAGARG
DDESGENPMNVAEMVEQPAKVMRIGSMIKQLLEEVRAAPLDEASRARLREIHRSSIAE
LEKGLAPELVAELERLSLPFAEDEVPSESELRIAQAQLVGWLEGLFHGIQTALFAQQM
AARAQLEQIRRALPPGSVPPGMADGEQPGRISGAGPYL"
misc_feature 78650..79126
/locus_tag="Caci_0077"
/note="Protein of unknown function (DUF2587); Region:
DUF2587; pfam10759"
/db_xref="CDD:220871"
gene complement(79104..80204)
/locus_tag="Caci_0078"
/db_xref="GeneID:8331403"
CDS complement(79104..80204)
/locus_tag="Caci_0078"
/inference="protein motif:PFAM:PF01636"
/note="PFAM: aminoglycoside phosphotransferase;
KEGG: sgr:SGR_3762 hypothetical protein"
/codon_start=1
/transl_table=11
/product="aminoglycoside phosphotransferase"
/protein_id="YP_003110874.1"
/db_xref="GI:256389310"
/db_xref="InterPro:IPR002575"
/db_xref="GeneID:8331403"
/translation="MPGTSGPLQALFLRFGLPAPTAFRPVDSGLLNRSYQITSADRRY
FLKHYLPWRGIGSGLPDAYGRRRSAAQTLRWQHEAVIRLQAAGLPAVAPLRDVHGRTV
AYVRGRPFAVFPWNDGVHRHGRHMHDIDARCLGTTLADVHTGLARVLPQVPQPLFVPT
ASERRAVAEAEQLLAVVDSGPGRDEMDLLSAHRLRERLALIPEVAHLRPAPDAVATVG
YIHGDFHAGNVMWSALEPGSRVTAIVDWEKTAVAPCGDEVVSTALVFFTGDYSGQLDL
DLVRAFIGGYAAARPQFSEQELADSVRRVWWERLTDFWILTWHYHHADHRADSLFPAT
AALVPWWTENYAKVLDAFLEGAAAATGTVPRR"
misc_feature complement(79308..80183)
/locus_tag="Caci_0078"
/note="Aminoglycoside 3'-phosphotransferase (APH) and
Choline Kinase (ChoK) family. The APH/ChoK family is part
of a larger superfamily that includes the catalytic
domains of other kinases, such as the typical
serine/threonine/tyrosine protein kinases (PKs)...;
Region: APH_ChoK_like; cl17270"
/db_xref="CDD:247824"
misc_feature complement(order(79410..79412,79470..79475,79515..79517,
79521..79526,79536..79538,79857..79868,79932..79934,
80064..80066,80070..80072,80103..80105,80115..80117))
/locus_tag="Caci_0078"
/note="active site"
/db_xref="CDD:240159"
misc_feature complement(order(79410..79412,79536..79538,80115..80117))
/locus_tag="Caci_0078"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:240159"
misc_feature complement(order(79470..79475,79515..79517,79521..79526,
79536..79538,79857..79868,79932..79934,80064..80066,
80070..80072,80103..80105))
/locus_tag="Caci_0078"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:240159"
gene 80355..81437
/locus_tag="Caci_0079"
/db_xref="GeneID:8331404"
CDS 80355..81437
/locus_tag="Caci_0079"
/inference="protein motif:PFAM:PF00756"
/note="PFAM: esterase;
KEGG: ace:Acel_0767 esterase"
/codon_start=1
/transl_table=11
/product="esterase"
/protein_id="YP_003110875.1"
/db_xref="GI:256389311"
/db_xref="InterPro:IPR000801"
/db_xref="GeneID:8331404"
/translation="MAASARGHRRAPKRSRRSPLRAVALFVISTALVVGSGVAFGYAT
HHLGKHQVTDDASVVAPPTGPLSDATDDPSATTNSAPGGKPSVPASPRPSLPKATGPG
KVTELKVASSDDDWPSRPVFVYRPAVPANVVLPVVYLLHGVPGEPDRIMDAVKAVLDK
AFTSGGEQPFIVAAPTGEGTAHNDTEWADAVDGKDMVETYMIKDVIPAVEGKTPRPAG
MRAIVGFSMGGYGAANLTLRHPDLFDQFASMAGYFRVDDPDGMFGSDSKIEAANTPDD
MVQKAAGKRVLLLEDQQDPDPLIQGEASEFAKRLDDCNCGVDLSWHLEPGGHTYDFVT
DSFPKVITFLNQGFTAPAGTTPSAAG"
sig_peptide 80355..80480
/locus_tag="Caci_0079"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.998) with cleavage site probability 0.941 at
residue 42"
misc_feature <80823..81398
/locus_tag="Caci_0079"
/note="Predicted esterase [General function prediction
only]; Region: COG0627"
/db_xref="CDD:223700"
misc_feature <80913..>81125
/locus_tag="Caci_0079"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4947"
/db_xref="CDD:227283"
gene complement(81501..82199)
/locus_tag="Caci_0080"
/db_xref="GeneID:8331405"
CDS complement(81501..82199)
/locus_tag="Caci_0080"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sgr:SGR_3019 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110876.1"
/db_xref="GI:256389312"
/db_xref="GeneID:8331405"
/translation="MRNLLGSLLAIIGAAATLVSPWQAWYNNRHGSSYKFYEVFGSGV
TLSGSGIMDSVFLVFLITAVLAVAGVVLRSRALVGAAGVIAFGFTILWMVRQGQAAGE
LTVTGANNRGLGSGVAYAFGGGLLMIIGSLMMTGRTRRTVVAEPARTKTADQAMYGTA
ATTSAPPAITTTAPADKNPVPPAAAPAATPAQTSASAAPTASERTGTERLSKEERQML
GLDEDASAEPKKQN"
sig_peptide complement(82128..82199)
/locus_tag="Caci_0080"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.981) with cleavage site probability 0.500 at
residue 24"
gene 82507..84381
/gene="dnaK"
/locus_tag="Caci_0081"
/db_xref="GeneID:8331406"
CDS 82507..84381
/gene="dnaK"
/locus_tag="Caci_0081"
/inference="protein motif:TFAM:TIGR02350"
/note="heat shock protein 70; assists in folding of
nascent polypeptide chains; refolding of misfolded
proteins; utilizes ATPase activity to help fold;
co-chaperones are DnaJ and GrpE; multiple copies in some
bacteria"
/codon_start=1
/transl_table=11
/product="molecular chaperone DnaK"
/protein_id="YP_003110877.1"
/db_xref="GI:256389313"
/db_xref="InterPro:IPR001023"
/db_xref="InterPro:IPR012725"
/db_xref="InterPro:IPR013126"
/db_xref="GeneID:8331406"
/translation="MARPVGIDLGTTNSVVCVLEGGEPTVITNAEGSRTTPSVVAFAK
NGEVLVGEVAKRQAVTNVERTIRSVKRHMGTDWKIGIDEKNFTPQQISAFILQKLKRD
AESYLSEKVTDAVITVPAYFSDSERQATKEAGEIAGLNVLRIVNEPTAAALAYGLDKG
EGDQTILVFDLGGGTFDVSLLEVGKDDDGFSTIEVKATNGDNHLGGDDWDNAVVEWLV
TQFKNAHGVDLSKDKMAMQRLREAGEKAKIELSSSTETSINLPYITASAEGPLHLDEK
LTRSQFQQLTSDLLDRCKTPFHQVIKDAGVALSAIEHVVLVGGSTRMPAVADLVRELT
GGKEPNKGVNPDEVVAVGAALQAGVLKGEVKDVLLLDVTPLSLGIETKGGIMTKLIEK
NTTIPTKRSETFTTAEDNQPSVQIQVYQGEREIAAYNKRLGMFELTGLPPAPRGLPQI
EVTFDIDANGIVNVSAKDLGTGKVQSMVITGGSALPKDEIDRMMREAEQYADEDHSRR
EAAEVRNQAESLVYSTEKFLKDNEDKVPADVKSEVDAAIGETREALKSEDSATIRSAS
EKLATTSQKLGAALYQQAQASGEAAGAPGGESAGAPGGGADDDVVDAEIVDEGKGGQA
"
misc_feature 82507..84252
/gene="dnaK"
/locus_tag="Caci_0081"
/note="molecular chaperone DnaK; Provisional; Region:
dnaK; PRK00290"
/db_xref="CDD:234715"
misc_feature 82507..83547
/gene="dnaK"
/locus_tag="Caci_0081"
/note="Nucleotide-binding domain of human HSPA9 and
similar proteins; Region: HSPA9-Ssq1-like_NBD; cd10234"
/db_xref="CDD:212676"
misc_feature order(82534..82545,82714..82716,82945..82947,83020..83025,
83029..83031,83122..83124,83236..83238,83245..83247,
83257..83259,83458..83466,83470..83472)
/gene="dnaK"
/locus_tag="Caci_0081"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212676"
misc_feature order(82588..82590,82597..82599,82651..82653,82663..82665,
82672..82677,82681..82686,82819..82830,83206..83208,
83215..83220,83227..83229,83281..83283,83287..83292)
/gene="dnaK"
/locus_tag="Caci_0081"
/note="NEF interaction site [polypeptide binding]; other
site"
/db_xref="CDD:212676"
misc_feature order(82876..82881,82885..82890,82933..82938,82942..82944,
83083..83094)
/gene="dnaK"
/locus_tag="Caci_0081"
/note="SBD interface [polypeptide binding]; other site"
/db_xref="CDD:212676"
gene 84577..85245
/locus_tag="Caci_0082"
/db_xref="GeneID:8331407"
CDS 84577..85245
/locus_tag="Caci_0082"
/inference="protein motif:PFAM:PF01025"
/note="PFAM: GrpE protein;
KEGG: sma:SAV_4485 heat shock protein GrpE"
/codon_start=1
/transl_table=11
/product="GrpE protein HSP-70 cofactor"
/protein_id="YP_003110878.1"
/db_xref="GI:256389314"
/db_xref="InterPro:IPR000740"
/db_xref="GeneID:8331407"
/translation="MSDEYAAEREGEGERANLAVTELLAKLAERTNELQGVQAELSER
TNDLQRLQAEFSNYKKRVERDRQVVKETAVAGALSELLPVLDDIGRAREHGELEGGFR
QVGEAFEAVVAKLGLARFGAAGELFDPNLHEALLSTTSPDVDEVTVAVLFRPGYRIGE
RVVRAAQVQVAEPGPALETEPAPEPAPKPKPAAPAAKRAPGGAGKTAAEPAAEVDDDD
DSGL"
misc_feature 84625..85056
/locus_tag="Caci_0082"
/note="GrpE; Region: GrpE; pfam01025"
/db_xref="CDD:216249"
misc_feature 84697..85056
/locus_tag="Caci_0082"
/note="GrpE is the adenine nucleotide exchange factor of
DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the
ATPase domain of Hsp70 catalyzing the dissociation of ADP,
which enables rebinding of ATP, one step in the Hsp70
reaction cycle in protein folding; Region: GrpE; cd00446"
/db_xref="CDD:238252"
misc_feature order(84703..84708,84715..84720,84727..84729,84739..84741,
84748..84753,84793..84795,84805..84807,84814..84816,
84835..84837,84847..84849,84877..84879,84886..84888,
84919..84921)
/locus_tag="Caci_0082"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238252"
misc_feature order(84754..84756,84961..84963,84970..84984,85030..85032)
/locus_tag="Caci_0082"
/note="hsp70 (ATPase domain) interactions [polypeptide
binding]; other site"
/db_xref="CDD:238252"
gene 85314..86438
/locus_tag="Caci_0083"
/db_xref="GeneID:8331408"
CDS 85314..86438
/locus_tag="Caci_0083"
/inference="protein motif:TFAM:TIGR02349"
/note="chaperone Hsp40; co-chaperone with DnaK;
Participates actively in the response to hyperosmotic and
heat shock by preventing the aggregation of
stress-denatured proteins and by disaggregating proteins,
also in an autonomous, dnaK-independent fashion"
/codon_start=1
/transl_table=11
/product="chaperone protein DnaJ"
/protein_id="YP_003110879.1"
/db_xref="GI:256389315"
/db_xref="InterPro:IPR001305"
/db_xref="InterPro:IPR001623"
/db_xref="InterPro:IPR002939"
/db_xref="InterPro:IPR003095"
/db_xref="InterPro:IPR012724"
/db_xref="GeneID:8331408"
/translation="MAVNKDYYKILGVPKDAPAADIKKAYRKLARQYHPDANKGDAAS
EEKFKEISEAYDVLSDDKRRKEYDDSRSVFGNGGFRAPGGGAPGGFNFDLGDLLGGLF
NRTGGPTTGTSTTGRTTQARRGSDVESEVTLKFSDSIDGATVSLRLTSDTPCSACSGT
GAKAGTTPRVCPTCSGTGQVSRNQGGFAFSEPCRDCKGRGLLVDDPCPVCHGSGRAAS
SRTIQARIPAGVRDGQRIRLKGKGASGERGGPAGDLYVVVHVSPHPVFGREDDNLTVT
VPVTFPEAVLGADIQVPTLGGMPVTVKLPANSQNGRVLRVRGRGVARKDGTKGDLLVR
FEIAVPAEIGDDARAALQKFQEATGNHHPRAELLDSAKGE"
misc_feature 85323..86402
/locus_tag="Caci_0083"
/note="chaperone protein DnaJ; Provisional; Region:
PRK14286"
/db_xref="CDD:172774"
misc_feature 85329..85493
/locus_tag="Caci_0083"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of Hsp70s; Region: DnaJ;
cd06257"
/db_xref="CDD:99751"
misc_feature order(85413..85421,85446..85448,85455..85460,85467..85472)
/locus_tag="Caci_0083"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
misc_feature 85773..85955
/locus_tag="Caci_0083"
/note="Zinc finger domain of DnaJ and HSP40; Region:
DnaJ_zf; cd10719"
/db_xref="CDD:199908"
misc_feature order(85773..85775,85782..85784,85824..85826,85833..85835,
85890..85892,85899..85901,85932..85934,85941..85943)
/locus_tag="Caci_0083"
/note="Zn binding sites [ion binding]; other site"
/db_xref="CDD:199908"
misc_feature <85971..86333
/locus_tag="Caci_0083"
/note="C-terminal substrate binding domain of DnaJ and
HSP40; Region: DnaJ_C; cd10747"
/db_xref="CDD:199909"
misc_feature order(86154..86159,86166..86171,86232..86243,86328..86333)
/locus_tag="Caci_0083"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:199909"
gene 86446..86916
/locus_tag="Caci_0084"
/db_xref="GeneID:8331409"
CDS 86446..86916
/locus_tag="Caci_0084"
/inference="protein motif:PFAM:PF00376"
/note="PFAM: regulatory protein MerR;
SMART: regulatory protein MerR;
KEGG: sma:SAV_4487 HspR protein"
/codon_start=1
/transl_table=11
/product="MerR family transcriptional regulator"
/protein_id="YP_003110880.1"
/db_xref="GI:256389316"
/db_xref="InterPro:IPR000551"
/db_xref="GeneID:8331409"
/translation="MASKNPFLPLTEETPVYVISVAAQLAGMHPQTLRQYDRLGIVCP
ERTGGGGRRYSARDIDTLREVQRLSQDEGVNLAGIKRIRELEEQVAALSRRVAELEAV
TLYPTAKGTVPVAAPIAPPVSPLPPAPPGYRGDLLPALPATFTTALAVWKPQGK"
misc_feature 86491..86748
/locus_tag="Caci_0084"
/note="Helix-Turn-Helix DNA binding domain of the HspR
transcription regulator; Region: HTH_HspR; cd04766"
/db_xref="CDD:133394"
misc_feature 86494..86703
/locus_tag="Caci_0084"
/note="MerR HTH family regulatory protein; Region: MerR_1;
pfam13411"
/db_xref="CDD:205589"
misc_feature order(86497..86505,86545..86547,86593..86601)
/locus_tag="Caci_0084"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:133394"
misc_feature order(86635..86637,86644..86646,86659..86664,86689..86691,
86698..86700,86710..86712,86728..86730,86740..86742)
/locus_tag="Caci_0084"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:133394"
gene 87023..89641
/locus_tag="Caci_0085"
/db_xref="GeneID:8331410"
CDS 87023..89641
/locus_tag="Caci_0085"
/inference="protein motif:TFAM:TIGR03346"
/note="KEGG: tfu:Tfu_0200 ATPase;
TIGRFAM: ATP-dependent chaperone ClpB;
PFAM: ATPase AAA; ATPase AAA central domain protein;
ATPase AAA; Clp domain protein;
SMART: ATPase AAA"
/codon_start=1
/transl_table=11
/product="ATP-dependent chaperone ClpB"
/protein_id="YP_003110881.1"
/db_xref="GI:256389317"
/db_xref="InterPro:IPR001270"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR003959"
/db_xref="InterPro:IPR004176"
/db_xref="InterPro:IPR011704"
/db_xref="InterPro:IPR013093"
/db_xref="InterPro:IPR017730"
/db_xref="GeneID:8331410"
/translation="MDSQKLTTKSQEALSVAIREATRAGNPQVESIQVLLALLGQVEG
TTRPLLEAVGVDRAALSQAVTAAAERLPSASGSTVSAPTLARNTLNALNAAGDEARKL
DDEYVSTEHLLLGLALGNDSTADLLKKAGATPQALREAFGKVRGSARVTSQDPEATYQ
ALEKYGVDLTAAARDGKLDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVE
GLAQRIIAGDVPESLRDKRLVSLDLGAMVAGAKYRGEFEERLKAVLADIKDSEGQIVT
FIDELHTVVGAGATGDSSMDAGNMLKPMLARGELRMVGATTLDEYRERIEKDPALERR
FQQVLVDEPTVEDTIAILRGLKGRYEAHHKVAISDTALVAAATLSHRYITSRFLPDKA
IDLIDEAASRLRMEIDSRPVEIDELQRTVDRMKMEELALAKEHDPASRDRLARLRLDL
ADRQEQLNALNARWEQEKSGLNRVGELKQRLDAMKSQVEQAQRSGDFETASRLLYAEI
PAVEAELETASTTVDEAEDVAPMVKEEVGPDDIAEVVGAWTGIPAGRLLEGETEKLLT
MEQRIGERLIGQAEAVAAVSDAVRRARAGISDPDRPTGSFLFLGPTGVGKTELAKALA
DFLFDDEHAMVRIDMSEYSEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLD
EVEKAHPEIFDVLLQVLDDGRLTDGQGRTVDFRNTILILTSNLGTSGFDLTVDEALDP
VQARLDRRQRVDNAVRAAFKPEFLNRLDAQVIFDPLGTTELGRIVDIQVRKLAARLAD
RRLGLEVTPGARDWLAIAGYEPAFGARPLRRLVQSSIGDPLARRLLAGEIRDGDTVRV
DVDIENDALIIGSQAS"
misc_feature 87038..89599
/locus_tag="Caci_0085"
/note="ATP-dependent chaperone ClpB; Region:
chaperone_ClpB; TIGR03346"
/db_xref="CDD:234173"
misc_feature 87071..87223
/locus_tag="Caci_0085"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:217254"
misc_feature 87311..87460
/locus_tag="Caci_0085"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:217254"
misc_feature 87566..88051
/locus_tag="Caci_0085"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 87641..87664
/locus_tag="Caci_0085"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(87644..87667,87857..87859,87971..87973)
/locus_tag="Caci_0085"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 87845..87862
/locus_tag="Caci_0085"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 88022..88024
/locus_tag="Caci_0085"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 88823..89194
/locus_tag="Caci_0085"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 88850..88873
/locus_tag="Caci_0085"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(88853..88876,89066..89068,89192..89194)
/locus_tag="Caci_0085"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 89054..89071
/locus_tag="Caci_0085"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 89348..89590
/locus_tag="Caci_0085"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; pfam10431"
/db_xref="CDD:204486"
gene 89681..90544
/locus_tag="Caci_0086"
/db_xref="GeneID:8331411"
CDS 89681..90544
/locus_tag="Caci_0086"
/inference="similar to AA sequence:KEGG:SGR_6214"
/note="KEGG: sgr:SGR_6214 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110882.1"
/db_xref="GI:256389318"
/db_xref="GeneID:8331411"
/translation="MPAALPTVIATRYVTALREGGSLPGLVEAADLGTYVVKFRSAGQ
GRKALVAEVIAGELARALALLVPALVGIELDPIIGAAEPDQEIQELLKGSKGLNLGMD
YLPGSLGYDPLAFPVEPELASRVVWFDALVRNVDRSWRNPNLLLWHRKLYLIDHGASL
IFHHNWPGAQKGALAPFDANDHVLASYAKDMPGADAALAPLVTEELLRSVVAVVPDEW
LVDEPGFDSADAVREAYVSYLLTRVVGPREWFPQVVDSSAQEAARAHEGSDLKARLKA
KHPNWMQGRVK"
gene 90541..90918
/locus_tag="Caci_0087"
/db_xref="GeneID:8331412"
CDS 90541..90918
/locus_tag="Caci_0087"
/inference="similar to AA sequence:KEGG:SCO1348"
/note="KEGG: sco:SCO1348 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110883.1"
/db_xref="GI:256389319"
/db_xref="GeneID:8331412"
/translation="MSVQPYEYSVLRAVPRVERGEYVNVGVVLYCQQLDFLGCATQLD
SVRVRALDPTADVEGIEALLGAVSKVCCGGPDSGPAGQDAMGRRFRWLIAPRSTVVQP
GPVHTGLTADPAAALDRLAGSLL"
misc_feature 90562..90900
/locus_tag="Caci_0087"
/note="Protein of unknown function (DUF3037); Region:
DUF3037; pfam11236"
/db_xref="CDD:151678"
gene complement(90866..91813)
/locus_tag="Caci_0088"
/db_xref="GeneID:8331413"
CDS complement(90866..91813)
/locus_tag="Caci_0088"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR
domain protein;
KEGG: tfu:Tfu_1700 short chain dehydrogenase"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_003110884.1"
/db_xref="GI:256389320"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8331413"
/translation="MGTWGPQGVSGKVVVITGAARGIGADAARRLARRGAKVALIGLE
PEELRKTAESCGPDATAWDADVTSWEQLGAAIDGIVDHYGGIDVVVANAGVAPTGFIR
SIDPSAFERTIEINLLGVWRTVRTALPHIIKNKGYVLVVSSAAALIHPPALAAYTASK
AGAEAFGDSLRAEVKHLGVDVGVAYFSWIKTDLVTSADAHPVLGKFRTSAPGPASRVY
PLEKVGQAVADGIAKRSRVICVPSWVNQLRRFHGMLPAIVEKANARATARADREMIAD
IEKRGVEASSRLTGPGGAAAQAAKEAIQPVGRELPQDQR"
misc_feature complement(90935..91789)
/locus_tag="Caci_0088"
/note="short chain dehydrogenase; Provisional; Region:
PRK05872"
/db_xref="CDD:235633"
misc_feature complement(91100..91774)
/locus_tag="Caci_0088"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature complement(order(91238..91243,91247..91258,91334..91336,
91346..91348,91385..91393,91469..91471,91532..91540,
91616..91624,91682..91690,91745..91756,91760..91762))
/locus_tag="Caci_0088"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(91334..91336,91346..91348,91385..91387,
91466..91468))
/locus_tag="Caci_0088"
/note="active site"
/db_xref="CDD:212491"
gene complement(91864..93579)
/locus_tag="Caci_0089"
/db_xref="GeneID:8331414"
CDS complement(91864..93579)
/locus_tag="Caci_0089"
/inference="protein motif:PFAM:PF00069"
/note="PFAM: serine/threonine protein kinase-related;
tyrosine protein kinase; protein of unknown function RIO1;
aminoglycoside phosphotransferase;
SMART: serine/threonine protein kinase; tyrosine protein
kinase;
KEGG: fre:Franean1_5221 serine/threonine protein kinase"
/codon_start=1
/transl_table=11
/product="serine/threonine protein kinase"
/protein_id="YP_003110885.1"
/db_xref="GI:256389321"
/db_xref="InterPro:IPR000687"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR001245"
/db_xref="InterPro:IPR002290"
/db_xref="InterPro:IPR002575"
/db_xref="InterPro:IPR003961"
/db_xref="InterPro:IPR008271"
/db_xref="InterPro:IPR017441"
/db_xref="InterPro:IPR017442"
/db_xref="GeneID:8331414"
/translation="MTLDMNSDVHKGGSPATDRLGPYLLVTQLGSGAMGRVFLGTDST
GRQAAVKVVRSDLADIPAFRKRFSRELNVAERVHSPRVAEIYDAQTEGKRPWLATEYV
PGPTLQDAVEQGGAFDNEHLRALAVAIAEALEVIHAAEVVHRDLKPANVLLGPDGPKV
IDFGVARALDASLLTNTGQTLGTPAYMSPEQADGRAVESASDVFALGSLLVFAATGRL
AFGDGAPLAILHRVVNNDPDLSGVAEDDEVLRGVIEGCLCKEPEDRPSPQQIKDTFGA
IGWQPLTGVAWQQPPLGVGLPLTAGDAADLPTVAIAPKRGTKRVAVISAATVAALILA
TIAVVEASGGGKGNTAADTARTGGPTSSSQQNGGAFPSTDTSSGSTSSSGQTTPTSSS
PPPPSQASGAPVPPGGGAGSTAPPQGSSQLVTVSVPITQGNGGSSQKPAPTSSHPTTH
PSSAHTTSAAPPPPPTHNPPGPMVAGDISVLIPNWVGAATVNVSWKAHSDATSYAIHY
TVKGTATNSDQTVPVSGTSYSYQIPADGTTCLQVRTVNQYGSSAFYPSPMYCVNSFGQ
VSSGG"
misc_feature complement(92767..93513)
/locus_tag="Caci_0089"
/note="Serine/Threonine protein kinases, catalytic domain;
Region: S_TKc; smart00220"
/db_xref="CDD:214567"
misc_feature complement(92758..93495)
/locus_tag="Caci_0089"
/note="Catalytic domain of Protein Kinases; Region: PKc;
cd00180"
/db_xref="CDD:173623"
misc_feature complement(order(93025..93036,93085..93087,93094..93096,
93124..93126,93130..93135,93139..93141,93145..93147,
93256..93258,93262..93264,93274..93285,93331..93333,
93427..93429,93433..93435,93469..93471,93481..93495))
/locus_tag="Caci_0089"
/note="active site"
/db_xref="CDD:173623"
misc_feature complement(order(93094..93096,93124..93126,93130..93135,
93139..93141,93145..93147,93262..93264,93274..93285,
93331..93333,93427..93429,93433..93435,93469..93471,
93481..93495))
/locus_tag="Caci_0089"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:173623"
misc_feature complement(order(93025..93036,93085..93087,93133..93135,
93139..93141,93145..93147,93256..93258,93262..93264,
93481..93483))
/locus_tag="Caci_0089"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173623"
misc_feature complement(order(93025..93036,93079..93099))
/locus_tag="Caci_0089"
/note="activation loop (A-loop); other site"
/db_xref="CDD:173623"
gene complement(93643..94437)
/locus_tag="Caci_0090"
/db_xref="GeneID:8331415"
CDS complement(93643..94437)
/locus_tag="Caci_0090"
/inference="protein motif:PFAM:PF00795"
/note="PFAM: nitrilase/cyanide hydratase and
apolipoprotein N-acyltransferase;
KEGG: sma:SAV_4383 hydrolase"
/codon_start=1
/transl_table=11
/product="nitrilase/cyanide hydratase and apolipoprotein
N- acyltransferase"
/protein_id="YP_003110886.1"
/db_xref="GI:256389322"
/db_xref="InterPro:IPR001110"
/db_xref="InterPro:IPR003010"
/db_xref="GeneID:8331415"
/translation="MRVSLMQLAVDDAEAPEDRWTRVVKLVEAERETGAELVVLPELW
VTGGFDYKSWTGHAEPIADSQPIAALEKVRTHDGSGPEMWLHFGSYVERTPEGILYNT
AVFRGPDGKQAQYRKIHRFGFSEGEVTLMGPGKDIVTVSSPWGTLGLATCYDLRFPEL
FRRLLNQGMEHMVMCSAWPAKRIEHWRVLLKARAIENQVFVFATNCVGTNGGVALGGR
SAVIDPWGNVVAEAGTGEEVLRVDVDPALVAQTRSALPVLNDRRLR"
misc_feature complement(93652..94437)
/locus_tag="Caci_0090"
/note="Predicted amidohydrolase [General function
prediction only]; Region: COG0388"
/db_xref="CDD:223465"
misc_feature complement(93652..94434)
/locus_tag="Caci_0090"
/note="Uncharacterized subgroup of the nitrilase
superfamily (putative class 13 nitrilases); Region:
nitrilase_5; cd07583"
/db_xref="CDD:143607"
misc_feature complement(order(93907..93909,93970..93975,93979..93984,
94057..94059,94075..94077,94087..94089,94312..94314))
/locus_tag="Caci_0090"
/note="putative active site [active]"
/db_xref="CDD:143607"
misc_feature complement(order(93982..93984,94087..94089,94312..94314))
/locus_tag="Caci_0090"
/note="catalytic triad [active]"
/db_xref="CDD:143607"
misc_feature complement(order(93652..93663,93784..93789,93850..93855,
93859..93867,93871..93876,93949..93954,93961..93975,
93979..93981,94033..94041,94060..94062,94075..94086))
/locus_tag="Caci_0090"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:143607"
gene complement(94534..96027)
/locus_tag="Caci_0091"
/db_xref="GeneID:8331416"
CDS complement(94534..96027)
/locus_tag="Caci_0091"
/inference="protein motif:PFAM:PF00198"
/note="PFAM: catalytic domain of components of various
dehydrogenase complexes; biotin/lipoyl attachment domain-
containing protein; E3 binding domain protein;
KEGG: sco:SCO3815 branched-chain alpha-keto acid
dehydrogenase subunit E2"
/codon_start=1
/transl_table=11
/product="catalytic domain of components of various
dehydrogenase complexes"
/protein_id="YP_003110887.1"
/db_xref="GI:256389323"
/db_xref="InterPro:IPR000089"
/db_xref="InterPro:IPR001078"
/db_xref="InterPro:IPR003016"
/db_xref="InterPro:IPR004167"
/db_xref="GeneID:8331416"
/translation="MGEIKRFNLPDVGEGLTEAEILAWSVKVGDLVKVNQVLVEIETA
KAAVELPSPWAGKIVELLVDEGQTVDVGTPIIGIDTDPSTPSTGGAGGDDMTAGVAAT
AEAKAAPAAAKEPKEAKREPVLVGYGVKQGASSRRPRKTAAAPSAADVMGATVREEPV
ADEVPAPAYYGQSAAREAAAPAVQTRTPDTTAAPAAPTGAKPLAKPPVRKLAKDLGVD
LALVVATGTNGTVTREDVHAAASGTSTAAAAPAAANGTAPAAAPFVNGERRVPIKGVR
KATATAMVQSAFTAPHVTEFLTVDVTPTMKFVQRLKEMPDFKGVRVSPLLLVAKAFLV
AMARNPEINARWDEAAGEIVYFDHVTLGIAAATPRGLLVPNVKGADLLPLVELGRALN
KLTDVAREGKTSLADMTGATATITNVGVFGVDTGTPILNPGEASILAFGAVREQPWMH
KGKVKPRQVTTLALSFDHRLVDGELGSKVLRDIGAVLADPLTALAWS"
misc_feature complement(94540..96018)
/locus_tag="Caci_0091"
/note="branched-chain alpha-keto acid dehydrogenase
subunit E2; Reviewed; Region: PRK11856"
/db_xref="CDD:237001"
misc_feature complement(95794..96009)
/locus_tag="Caci_0091"
/note="Lipoyl domain of the dihydrolipoyl acyltransferase
component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid
dehydrogenase multienzyme complexes, like pyruvate
dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH)
and branched-chain 2-oxo acid...; Region: lipoyl_domain;
cd06849"
/db_xref="CDD:133458"
misc_feature complement(order(95875..95877,95887..95904,95923..95925))
/locus_tag="Caci_0091"
/note="E3 interaction surface; other site"
/db_xref="CDD:133458"
misc_feature complement(95893..95895)
/locus_tag="Caci_0091"
/note="lipoyl attachment site [posttranslational
modification]; other site"
/db_xref="CDD:133458"
misc_feature complement(95320..>95406)
/locus_tag="Caci_0091"
/note="e3 binding domain; Region: E3_binding; pfam02817"
/db_xref="CDD:202412"
misc_feature complement(94546..95181)
/locus_tag="Caci_0091"
/note="2-oxoacid dehydrogenases acyltransferase (catalytic
domain); Region: 2-oxoacid_dh; pfam00198"
/db_xref="CDD:215782"
gene complement(96046..97041)
/locus_tag="Caci_0092"
/db_xref="GeneID:8331417"
CDS complement(96046..97041)
/locus_tag="Caci_0092"
/inference="protein motif:PFAM:PF02779"
/note="PFAM: transketolase; transketolase domain protein;
KEGG: sco:SCO3816 branched-chain alpha keto acid
dehydrogenase E1 subunit beta"
/codon_start=1
/transl_table=11
/product="transketolase"
/protein_id="YP_003110888.1"
/db_xref="GI:256389324"
/db_xref="InterPro:IPR005475"
/db_xref="InterPro:IPR005476"
/db_xref="GeneID:8331417"
/translation="MAESTSKTQQISLGKGLNLGLRRALEDDPKVLLMGEDIGKLGGV
FRVTDGLQKDFGDSRVIDTPLAESGIVGTAVGLALSGYRPVVEIQFDGFVYPAFDQIV
TQVAKMRARALGTVSMPIVIRIPFGGGIGAVEHHSESPEGYFAMTAGLRVVAASNPVD
AYWMIQQAIASDDPVVFFEPKRRYWDKAELDPAATPYPLYASRVVREGTDATLVAYGP
MVKTCLEAAAAAAEEGRSLEVIDLRTLSPLDLEPVYASVRKTGRLITVHEASVFMGMG
AEVAAKVTEKCFYSLEAPVLRVGAPHTPYPPSRVEEEFLPDLDRVLDAVDRAFAF"
misc_feature complement(96049..97014)
/locus_tag="Caci_0092"
/note="Pyruvate/2-oxoglutarate dehydrogenase complex,
dehydrogenase (E1) component, eukaryotic type, beta
subunit [Energy production and conversion]; Region: AcoB;
COG0022"
/db_xref="CDD:223101"
misc_feature complement(96499..96993)
/locus_tag="Caci_0092"
/note="Pyrimidine (PYR) binding domain of the beta
subunits of the E1 components of human pyruvate
dehydrogenase complex (E1- PDHc) and related proteins;
Region: TPP_PYR_E1-PDHc-beta_like; cd07036"
/db_xref="CDD:132919"
misc_feature complement(order(96523..96528,96589..96594,96637..96639,
96646..96648,96712..96717,96742..96747,96754..96756,
96811..96819,96823..96828,96835..96852,96856..96858,
96865..96867,96931..96933,96949..96951,96955..96957))
/locus_tag="Caci_0092"
/note="alpha subunit interface [polypeptide binding];
other site"
/db_xref="CDD:132919"
misc_feature complement(order(96754..96756,96763..96765,96841..96843,
96847..96849,96934..96936))
/locus_tag="Caci_0092"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132919"
misc_feature complement(order(96598..96600,96604..96609,96613..96615,
96637..96642,96646..96648,96712..96714,96721..96723,
96733..96735,96748..96750,96754..96759,96841..96852,
96856..96858,96931..96933))
/locus_tag="Caci_0092"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:132919"
misc_feature complement(96106..96435)
/locus_tag="Caci_0092"
/note="Transketolase, C-terminal domain; Region:
Transketolase_C; pfam02780"
/db_xref="CDD:217227"
gene complement(97043..98170)
/locus_tag="Caci_0093"
/db_xref="GeneID:8331418"
CDS complement(97043..98170)
/locus_tag="Caci_0093"
/EC_number="1.2.4.1"
/inference="protein motif:TFAM:TIGR03181"
/note="KEGG: sgr:SGR_3765 branched-chain alpha keto acid
dehydrogenase E1 subunit alpha;
TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1
component, subunit alpha;
PFAM: dehydrogenase E1 component"
/codon_start=1
/transl_table=11
/product="pyruvate dehydrogenase (acetyl-transferring) E1
component subunit alpha"
/protein_id="YP_003110889.1"
/db_xref="GI:256389325"
/db_xref="InterPro:IPR001017"
/db_xref="InterPro:IPR017596"
/db_xref="GeneID:8331418"
/translation="MVTSRKGAGGKTAAKKKAGPADPDLVQLLTPDGDLVEHPEYSID
LTPEEYRGLYRDMVLVRRIDAEGTALQRQGELGLWAPLLGQEAAQVGSGRAQTAEDYA
FPTYREHGVAWCRDVDPVNLLGMFRGVNNGGWDPNEKNFHLYTIVIGSQTLHATGYAM
GMQRDGREAAVIAYFGDGASSQGDVNEAFVFASVNNAPVVFFCQNNQWAISEPNERQF
RVPLYQRAAGFGFPGVRVDGNDVLACLAVTRAALERARTGNGPMLVEAFTYRMGAHTT
SDDPTRYRSSDELEEWKAKDPILRMRAFLEKSKYADEAFFKEVDTEADTVAADIRERC
VTMPDPKPISIFDHVYAEPHPLMDEERAEYGAYWESFEGAH"
misc_feature complement(97079..98101)
/locus_tag="Caci_0093"
/note="pyruvate dehydrogenase E1 component, alpha subunit;
Region: PDH_E1_alph_x; TIGR03181"
/db_xref="CDD:213783"
misc_feature complement(97172..98014)
/locus_tag="Caci_0093"
/note="Thiamine pyrophosphate (TPP) family, E1 of
PDC_ADC_BCADC subfamily, TPP-binding module; composed of
proteins similar to the E1 components of the human
pyruvate dehydrogenase complex (PDC), the acetoin
dehydrogenase complex (ADC) and the branched chain...;
Region: TPP_E1_PDC_ADC_BCADC; cd02000"
/db_xref="CDD:238958"
misc_feature complement(order(97349..97351,97547..97549,97553..97555,
97634..97645,97727..97729,97733..97735,97850..97855))
/locus_tag="Caci_0093"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:238958"
misc_feature complement(order(97589..97591,97598..97603,97619..97624,
97679..97681,97688..97693,97697..97702,97709..97714,
97721..97723,97736..97738,97742..97744,97748..97750))
/locus_tag="Caci_0093"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:238958"
misc_feature complement(order(97325..97327,97337..97339,97481..97483,
97496..97498,97535..97546,97589..97591,97601..97603,
97613..97615,97622..97633,97637..97639,97730..97735))
/locus_tag="Caci_0093"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:238958"
misc_feature complement(order(97280..97288,97310..97342,97346..97366))
/locus_tag="Caci_0093"
/note="phosphorylation loop region [posttranslational
modification]"
/db_xref="CDD:238958"
gene 98378..99079
/locus_tag="Caci_0094"
/db_xref="GeneID:8331419"
CDS 98378..99079
/locus_tag="Caci_0094"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; regulatory
protein LuxR; Sigma-70 region 4 type 2;
SMART: response regulator receiver; regulatory protein
LuxR;
KEGG: ace:Acel_0518 two component LuxR family
transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_003110890.1"
/db_xref="GI:256389326"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR013249"
/db_xref="GeneID:8331419"
/translation="MHSDAGKPGIPDSIRVFLLDDHELVRRGVAEMLSAEPDIDVTGQ
AGSVAQTVAAAEAARPDVALLDVRLPDGSGIEVCRELKSRMPGLGCLMLTSFSDDDAL
FGAIMAGAAGYVLKDIRGSALVDAVRTVARGGSLLDPTATEKLLSRLRVGIVPGEADR
EAAASKLATLTVSEKRILELIAEGLTNRQIGERLNLAEKTVKNYITGILAKLAMQRRT
QAAAFAVRHLPGRSQ"
misc_feature 98417..99058
/locus_tag="Caci_0094"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:225107"
misc_feature 98426..98770
/locus_tag="Caci_0094"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature order(98435..98440,98573..98575,98597..98599,98657..98659,
98714..98716,98723..98728)
/locus_tag="Caci_0094"
/note="active site"
/db_xref="CDD:238088"
misc_feature 98573..98575
/locus_tag="Caci_0094"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature order(98582..98587,98591..98599)
/locus_tag="Caci_0094"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature 98723..98731
/locus_tag="Caci_0094"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature 98885..99055
/locus_tag="Caci_0094"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(98888..98896,98933..98941,98963..98968,98972..98977,
98981..98995,99026..99028)
/locus_tag="Caci_0094"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(98921..98923,98927..98929,98933..98935,99026..99034,
99041..99043,99050..99055)
/locus_tag="Caci_0094"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(99127..99723)
/locus_tag="Caci_0095"
/db_xref="GeneID:8331420"
CDS complement(99127..99723)
/locus_tag="Caci_0095"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: sco:SCO1339 hypothetical protein"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003110891.1"
/db_xref="GI:256389327"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331420"
/translation="MTSRPDLIGDTAIALLAERGLRGLTHRAVDEAAGLPPGSTSNHA
RTRSALLETTFARLCRLEAEIFEDAANPGGLLALATLTPETAADLVAAQLHDTLTHRR
EQALARFELALEATRRPELRAIYDTAGATFREPARGLMAALGATDPDRAGRSFIAFSE
GILFDSVAGAGSRKVPTQEEIRDDLLELFRGMLMEPSP"
misc_feature complement(99568..99696)
/locus_tag="Caci_0095"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 99812..100978
/locus_tag="Caci_0096"
/db_xref="GeneID:8331421"
CDS 99812..100978
/locus_tag="Caci_0096"
/inference="protein motif:PFAM:PF01494"
/note="PFAM: monooxygenase FAD-binding;
KEGG: sco:SCO1338 monooxygenase (secreted protein)"
/codon_start=1
/transl_table=11
/product="monooxygenase FAD-binding"
/protein_id="YP_003110892.1"
/db_xref="GI:256389328"
/db_xref="InterPro:IPR002938"
/db_xref="InterPro:IPR003042"
/db_xref="GeneID:8331421"
/translation="MEAIVVGAGFGGLTAAVGLFQRGWDVTVVERATELRPVGSGLAV
APNGLRALDTLGVGDAVRKLAAFQGDATVTRPDGRVIARTASKAIVRRFGDAVIPATR
SSVMDVLTALVPADVFRLGVAAQGVEAGSASQRPCLLTDSGRLEADMIVAADGVNSVL
RRALFPEHPGAVYSGITAWRLLVPTPAGDFLPGEVWGGGRVFGITPLADGRTYAYGAD
HAEPGITYPDEKAELLRRFGDWHFPIPALISGADPETVLHNDIYEIAEALPAYHRGSV
AILGDAAHAMTPHLGQGANQAMEDGVTLAALVGPAKDSEEIASALARYTALRALRGAD
MVRRSHRMGALTQSTSRSKTALRNLGMSLVGRLVPDLALRAMEPVVAWRPPEGP"
misc_feature 99812..100903
/locus_tag="Caci_0096"
/note="hypothetical protein; Provisional; Region:
PRK06753"
/db_xref="CDD:168661"
misc_feature 99812..100729
/locus_tag="Caci_0096"
/note="hypothetical protein; Provisional; Region:
PRK07236"
/db_xref="CDD:235980"
gene 100989..101933
/locus_tag="Caci_0097"
/db_xref="GeneID:8331422"
CDS 100989..101933
/locus_tag="Caci_0097"
/EC_number="4.2.1.51"
/inference="protein motif:PRIAM:4.2.1.51"
/note="PFAM: prephenate dehydratase; amino acid-binding
ACT domain protein;
KEGG: ace:Acel_2105 prephenate dehydratase"
/codon_start=1
/transl_table=11
/product="prephenate dehydratase"
/protein_id="YP_003110893.1"
/db_xref="GI:256389329"
/db_xref="InterPro:IPR001086"
/db_xref="InterPro:IPR002912"
/db_xref="GeneID:8331422"
/translation="MTDTASPRVPTRYGFLGPAGTFTEAALLSVPGARDAERVPYESV
PAALDAVRRDEVAGAVVAFENSVEGAVPATLDDLSTEEPPLHIVREILLPVEFALMGR
PDTALADIKTVSSHPHAYPQCRRWLAENLPDARWVAASSNADAARLVSEGVHDAALAG
SFAAPFYRLTLLAENIHDVSGAVTRFVMVVPPGPPPARTGADKTSLAVVLRDNHPGAL
LEILEEFAVRGVDLMRIESRPTRSKLGTYWFSIDCEGHLEDARVGEVLTGLRRVAAEV
RYLGSYPRADGRAAEIRKGTSDEDFHEAAEWLAGLRNR"
misc_feature 101016..101837
/locus_tag="Caci_0097"
/note="prephenate dehydratase; Provisional; Region:
PRK11898"
/db_xref="CDD:237013"
misc_feature 101028..101555
/locus_tag="Caci_0097"
/note="Prephenate dehydratase; Region: PDT; pfam00800"
/db_xref="CDD:216127"
misc_feature 101595..101837
/locus_tag="Caci_0097"
/note="C-terminal ACT domain of the bifunctional
chorismate mutase-prephenate dehydratase (CM-PDT) enzyme
and the prephenate dehydratase (PDT) enzyme; Region:
ACT_CM-PDT; cd04905"
/db_xref="CDD:153177"
misc_feature order(101634..101645,101694..101705)
/locus_tag="Caci_0097"
/note="putative L-Phe binding site [chemical binding];
other site"
/db_xref="CDD:153177"
gene complement(101920..102750)
/locus_tag="Caci_0098"
/db_xref="GeneID:8331423"
CDS complement(101920..102750)
/locus_tag="Caci_0098"
/inference="similar to AA sequence:KEGG:SAV_4347"
/note="KEGG: sma:SAV_4347 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110894.1"
/db_xref="GI:256389330"
/db_xref="GeneID:8331423"
/translation="METAQAMSEPLFQNLEDAVVVAETALLDTQVAVESLRAELDQFT
RLHQIQLGPLYGRLDELDALTAETEAAMTGDPEAIRRAVEARARVDGEDPMLFAAANA
GLLEDDGEGGSEHEQKPPRPREEAAPTPDPDVPVRPSKTAQRLYRELARRSHPDLVQD
QAEIARRSAFITRVNAAYEKDDLPALQKLSEEWSLTSSGPAVDSPQREMWLQHRLIWL
RVKQAELALERQTLMENPMADVLAAYQYDSLTALRSISEQLYTAIAERETLLNALIGS
"
misc_feature complement(102214..>102324)
/locus_tag="Caci_0098"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of Hsp70s; Region: DnaJ;
cl02542"
/db_xref="CDD:243077"
misc_feature complement(order(102223..102228,102244..102249,
102256..102258,102283..102291))
/locus_tag="Caci_0098"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
gene 102850..103614
/locus_tag="Caci_0099"
/db_xref="GeneID:8331424"
CDS 102850..103614
/locus_tag="Caci_0099"
/inference="protein motif:PFAM:PF03746"
/note="PFAM: LamB/YcsF family protein;
KEGG: fal:FRAAL4906 hypothetical protein"
/codon_start=1
/transl_table=11
/product="LamB/YcsF family protein"
/protein_id="YP_003110895.1"
/db_xref="GI:256389331"
/db_xref="InterPro:IPR005501"
/db_xref="GeneID:8331424"
/translation="MIDLNADLGEGFGRWRLGDDDALLELVTSANVACGFHAGDPSTM
RRVCAAAVSRGVRVGAQVGYRDLAGFGRRDIEYDPHELADDVLFQIGALDAFARAAGD
RVRYVKPHGALYNRIVHDAVQAEAVVRAVVTFASVYDVQVPVLGLPGSVFLELATTAG
LSVIPEAFADRAYTPQGTLVSRSKPGAVLTTPEEVAGRAVEMAVSGTVRAIDGTLVNV
SARSLCVHGDSPSAVAMAAAVRDGLRSVGVEVGAFA"
misc_feature 102853..103578
/locus_tag="Caci_0099"
/note="LamB/YcsF family of lactam utilization protein;
Region: LamB_YcsF_like; cd10787"
/db_xref="CDD:212099"
misc_feature order(102868..102870,103030..103032,103063..103065,
103171..103173,103177..103182,103192..103194,
103351..103353,103360..103362,103384..103386,
103393..103395,103525..103527)
/locus_tag="Caci_0099"
/note="putative active site [active]"
/db_xref="CDD:212099"
gene 103647..105341
/locus_tag="Caci_0100"
/db_xref="GeneID:8331425"
CDS 103647..105341
/locus_tag="Caci_0100"
/inference="protein motif:PFAM:PF02626"
/note="PFAM: allophanate hydrolase subunit 2; allophanate
hydrolase subunit 1;
SMART: allophanate hydrolase subunit 2; allophanate
hydrolase subunit 1;
KEGG: aau:AAur_0053 UreA carboxylase/allophanate hydrolase
domain-containing protein"
/codon_start=1
/transl_table=11
/product="allophanate hydrolase subunit 2"
/protein_id="YP_003110896.1"
/db_xref="GI:256389332"
/db_xref="InterPro:IPR003778"
/db_xref="InterPro:IPR003833"
/db_xref="GeneID:8331425"
/translation="MLPAGPFGVLLEFDSLDKVQRCFAWVERWRTARPGVLVDVVPAE
QTLMAIATFDDAGQRGLREFVAAVGAVDWADAGTDDDAAPAADAETVELPVTYDGPDL
DDVTRLTGLAANEIVSLHTEAEFTVAFTGFAPGFAYLTGLPDALRVPRRDAPRTRVPT
GAVALGGPYSGVYPRESPGGWQLIGQLAPWAPTLWDETRESPALLRPGTRVRFVDAAG
QSAPDSSAPAKLTQATAAATEPGLRVVRAGPLTTVQDLGRPGFAHLGVPRSGAVDRTS
LKLANRLVGNEEGAAALELTLGGGAVQLEVGRWVAVTGARCEITMTVPAPESALEPAA
AREVGPDRKSAPAAGPSHRPIVMRTVPGTAFYAPEGAVVEVGPAVAGVRAYLAMAGGV
GGFEVLGSRSVDLLSGVGGRALGGGARVGVGVPVGLPPDIPGLGMAPVRDVGDPVVVR
LVLGPRSEWFTDDAVRDLVAARWTVGVESNRTAVRLDGPSLARARDGEPASEPLVVGA
VQVPRDGRPLLFLADHPVTGGYPVIACAHPADVDAAGQARPGTGIRFRMVGGLASR"
misc_feature 103650..104261
/locus_tag="Caci_0100"
/note="Allophanate hydrolase subunit 1; Region: AHS1;
pfam02682"
/db_xref="CDD:217182"
misc_feature 103665..104288
/locus_tag="Caci_0100"
/note="Allophanate hydrolase subunit 1 [Amino acid
transport and metabolism]; Region: DUR1; cl00896"
/db_xref="CDD:242178"
misc_feature 104433..105320
/locus_tag="Caci_0100"
/note="Allophanate hydrolase subunit 2; Region: AHS2;
cl00865"
/db_xref="CDD:242152"
gene complement(105382..106392)
/locus_tag="Caci_0101"
/db_xref="GeneID:8331426"
CDS complement(105382..106392)
/locus_tag="Caci_0101"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: stp:Strop_1435 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110897.1"
/db_xref="GI:256389333"
/db_xref="GeneID:8331426"
/translation="MPTQTQPWLRAELIAAPETTPGAQLMIPADGVEFHDDQLVFHHQ
GDIVYVAAQGQLRSITWFARQPNPETARRKAQWPNHGTRWTDEERADLRRHLSTGHSW
KTISHAHGRSRSGCQQEAVKQGWLDPETLQPTPELLLEAAAPIPDTAAAPAAPAAPAD
HAAPSTNDSHPLSVAASDSTSATASVAASNSVSDSTSGAASDSTPGAESPAIPMHSPA
APHAPTPLIFTGSEAAPTPAHAAATPVSHSAVAQPDRPRIPPRVPRQRTGPTTEPHPG
PDPGGTSSQDSDPDTGDSPGATPSPGTRFLSRAQSSLARATLGAYMNPPRGQSDPASS
PT"
misc_feature complement(<106039..106143)
/locus_tag="Caci_0101"
/note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
Tandem copies of the domain bind telomeric DNA tandem
repeatsas part of the capping complex. Binding is sequence
dependent for repeats which contain the G/C rich motif
[C2-3 A (CA)1-6]. The...; Region: SANT; cl17250"
/db_xref="CDD:247804"
gene complement(106496..106774)
/locus_tag="Caci_0102"
/db_xref="GeneID:8331427"
CDS complement(106496..106774)
/locus_tag="Caci_0102"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: nfa:nfa32830 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110898.1"
/db_xref="GI:256389334"
/db_xref="GeneID:8331427"
/translation="MTTQAPQPPPASQPPRTAADKAQRSRMIGAIVIAVVAIWFILAN
TRKASITFWIVTVTSPMWLTLAGTFLAGMLTSLLLTRTRTRKRQKQPQ"
gene complement(106844..107413)
/locus_tag="Caci_0103"
/db_xref="GeneID:8331428"
CDS complement(106844..107413)
/locus_tag="Caci_0103"
/inference="protein motif:PFAM:PF00498"
/note="PFAM: Forkhead-associated protein; protein of
unknown function DUF1707;
SMART: Forkhead-associated protein;
KEGG: sma:SAV_2158 hypothetical protein"
/codon_start=1
/transl_table=11
/product="FHA domain-containing protein"
/protein_id="YP_003110899.1"
/db_xref="GI:256389335"
/db_xref="InterPro:IPR000253"
/db_xref="InterPro:IPR012551"
/db_xref="GeneID:8331428"
/translation="MGGPSFGNAGWQPPDFRPSDAERDNAIDALSAGAEAGRLSSDTF
SHRLDQALAVQSHSELTQLVSDLPIPADQPGFGQRVVNAVSAVAHFRFKVKAAWRGPS
LPRLSLPGGPQVTLRIGRMPECDLQLFDTTVSRYHAEFRRSQNGWFLVDLGSTNGTRV
NGWRITAPTAVQPGDEVSFGSVVFSLNGR"
misc_feature complement(107210..107365)
/locus_tag="Caci_0103"
/note="Domain of unknown function (DUF1707); Region:
DUF1707; pfam08044"
/db_xref="CDD:149239"
misc_feature complement(106847..>107077)
/locus_tag="Caci_0103"
/note="FOG: FHA domain [Signal transduction mechanisms];
Region: COG1716"
/db_xref="CDD:224630"
misc_feature complement(106856..>107071)
/locus_tag="Caci_0103"
/note="Forkhead associated domain (FHA); found in
eukaryotic and prokaryotic proteins. Putative nuclear
signalling domain. FHA domains may bind phosphothreonine,
phosphoserine and sometimes phosphotyrosine. In
eukaryotes, many FHA domain-containing proteins...;
Region: FHA; cd00060"
/db_xref="CDD:238017"
misc_feature complement(order(106943..106951,107009..107014,
107018..107020,107054..107056))
/locus_tag="Caci_0103"
/note="phosphopeptide binding site; other site"
/db_xref="CDD:238017"
gene complement(107482..108756)
/locus_tag="Caci_0104"
/db_xref="GeneID:8331429"
CDS complement(107482..108756)
/locus_tag="Caci_0104"
/inference="protein motif:PFAM:PF00079"
/note="PFAM: proteinase inhibitor I4 serpin;
SMART: proteinase inhibitor I4 serpin;
KEGG: scl:sce4096 secreted serine (or cysteine) proteinase
inhibitor, clade B (ovalbumin), member"
/codon_start=1
/transl_table=11
/product="proteinase inhibitor I4 serpin"
/protein_id="YP_003110900.1"
/db_xref="GI:256389336"
/db_xref="InterPro:IPR000215"
/db_xref="GeneID:8331429"
/translation="MPRKQIAAITAASLAALTACSSSGSSSSAGGSLVRVNAARATVG
QADLSAASAGVNAFGVDVFHSVADGDEGNVMISPTSLATVLTMLLPGAKGQTEAQMAK
ALHTTMTADQFADALGALDSATVQRELADKAELQQYDTVWTQKGYDIQPSYLQTLASA
FDAGVRETDFTNSESARQTINKTVEDQTNGLIKDLFGPGSISPATRLALTDSLYLKAK
WADAFAKSATSDKPFHLTNGSTANVPTMGKEHSFAYAHGADWQYAELPYQQDHLAMGI
LLPASGSFDTFRKSLTGDSLATMTASATPSPVDLELPKFTFDTSRDLKSPLESLGMQT
VFDPNSADLSGVPAKPESLFVGAVVQKTHVAVDEDGTTAAAASGVTVVAGAAPQQSPP
AEMHVDRPFLFLIRDTVTGQILFLGQVSDPRG"
sig_peptide complement(108670..108756)
/locus_tag="Caci_0104"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.515 at
residue 29"
misc_feature complement(107500..108597)
/locus_tag="Caci_0104"
/note="SERine Proteinase INhibitors (serpins) exhibit
conformational polymorphism shifting from native to
cleaved, latent, delta, or polymorphic forms. Many
serpins, such as antitrypsin and antichymotrypsin,
function as serine protease inhibitors which regulate...;
Region: SERPIN; cd00172"
/db_xref="CDD:238101"
misc_feature complement(107491..108540)
/locus_tag="Caci_0104"
/note="serpin-like protein; Provisional; Region: PHA02660"
/db_xref="CDD:165039"
misc_feature complement(order(107557..107574,107638..107649))
/locus_tag="Caci_0104"
/note="reactive center loop; other site"
/db_xref="CDD:238101"
gene 108837..109391
/locus_tag="Caci_0105"
/db_xref="GeneID:8331430"
CDS 108837..109391
/locus_tag="Caci_0105"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: rha:RHA1_ro03411 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110901.1"
/db_xref="GI:256389337"
/db_xref="GeneID:8331430"
/translation="MNAMTVPPMSSPAMPQNQEQEGPGEAVDIPQQQDAEPRQEEMPA
VTAAETEPGGGAGETGEPAADGDEGKEPAADAGETSGDRDEKEEKEDKDEKKTAAKPK
RKSAPRKTAGGSKTLVVLKGGRVQYADTDAVVVVDLDEAASPDTDVHDVLDRLTELRD
ATESPAKTDAVRALTDLIQEKALG"
gene complement(109615..110286)
/locus_tag="Caci_0106"
/db_xref="GeneID:8331431"
CDS complement(109615..110286)
/locus_tag="Caci_0106"
/inference="protein motif:PFAM:PF00881"
/note="PFAM: nitroreductase;
KEGG: fre:Franean1_3917 nitroreductase"
/codon_start=1
/transl_table=11
/product="nitroreductase"
/protein_id="YP_003110902.1"
/db_xref="GI:256389338"
/db_xref="InterPro:IPR000415"
/db_xref="GeneID:8331431"
/translation="MDIYEALYTTRAMRRVKPDPIPESVQARILDAAIRAPSGGNGQN
WRFLLLDDPEKKKLLGPLYRDALDQLYTTVYAPMLAAIAADPDSPESRQMAKVTKSSR
WLGENFEQVPLFLFAFVQRDRSGGSIFPAVWNAQLAARAQGVGSALTSILGGFHDQEV
KEILGVPAEEKWTQSCCVSFGYPTGRWGVAPRRPAHEVAYRNGWGEPVGFTVDEPLWQ
PSPES"
misc_feature complement(109741..110268)
/locus_tag="Caci_0106"
/note="Proteins of this family catalyze the reduction of
flavin or nitrocompounds using NAD(P)H as electron donor
in a obligatory two-electron transfer, utilizing FMN or
FAD as cofactor. They are often found to be homodimers.
Enzymes of this family are...; Region:
Nitro_FMN_reductase; cd02062"
/db_xref="CDD:239015"
misc_feature complement(order(109834..109839,110167..110169,
110245..110247,110251..110253,110257..110259))
/locus_tag="Caci_0106"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:239015"
misc_feature complement(order(109876..109878,109885..109890,
109897..109902,109906..109908))
/locus_tag="Caci_0106"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:239015"
gene complement(110334..110888)
/locus_tag="Caci_0107"
/db_xref="GeneID:8331432"
CDS complement(110334..110888)
/locus_tag="Caci_0107"
/inference="similar to AA sequence:KEGG:SGR_4289"
/note="KEGG: sgr:SGR_4289 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110903.1"
/db_xref="GI:256389339"
/db_xref="GeneID:8331432"
/translation="MPTATTARPKLAARLSGRRHTSRTRRLRVIGAAGFAGVSMALLT
AEHSVPPARRPPRFAAESLMSGLVAVPVRFADAGSTGYLRPGDRIDVLAAHDAGPDGP
PGPPEASSGPIPGLGADPPRGETAVAVDVSVLEIAHSADPGSLTRAAPDDGGLVFLAV
DNATAARLARAAVADRLSYALRHG"
sig_peptide complement(110763..110888)
/locus_tag="Caci_0107"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.959) with cleavage site probability 0.318 at
residue 42"
gene complement(111026..111454)
/locus_tag="Caci_0108"
/db_xref="GeneID:8331433"
CDS complement(111026..111454)
/locus_tag="Caci_0108"
/inference="protein motif:TFAM:TIGR02605"
/note="TIGRFAM: regulatory protein, FmdB family;
KEGG: sco:SCO3187 hypothetical protein"
/codon_start=1
/transl_table=11
/product="FmdB family regulatory protein"
/protein_id="YP_003110904.1"
/db_xref="GI:256389340"
/db_xref="InterPro:IPR013429"
/db_xref="GeneID:8331433"
/translation="MPTYQYQCKDCGEALEVVQKFTDDALTVCPNCQGDLRKVFSAVG
IVFKGSGFYRTDSRSSSSSSTPPGSSSNGSSGSGSGSSSDSGSGSGSGSSGSGSSSGS
GGSSGSGSSGGSSKGGSSSSSSSTSSSSSSSSGSSSSTKS"
misc_feature complement(<111281..111454)
/locus_tag="Caci_0108"
/note="Zinc ribbon domain; Region: CxxC_CxxC_SSSS;
cl00993"
/db_xref="CDD:242237"
gene complement(111609..113939)
/locus_tag="Caci_0109"
/db_xref="GeneID:8331434"
CDS complement(111609..113939)
/locus_tag="Caci_0109"
/inference="protein motif:TFAM:TIGR00229"
/note="KEGG: tfu:Tfu_0250 PAS containing protein
phosphatase 2C-like;
TIGRFAM: PAS sensor protein;
PFAM: stage II sporulation E family protein; PAS fold
domain protein; GAF domain protein; PAS fold-4 domain
protein;
SMART: protein phosphatase 2C domain protein; GAF domain
protein; PAS domain containing protein"
/codon_start=1
/transl_table=11
/product="PAS/PAC sensor protein"
/protein_id="YP_003110905.1"
/db_xref="GI:256389341"
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR001932"
/db_xref="InterPro:IPR003018"
/db_xref="InterPro:IPR010822"
/db_xref="InterPro:IPR013656"
/db_xref="InterPro:IPR013767"
/db_xref="GeneID:8331434"
/translation="MRRQPGTGEQLPHARPQPSAELVPANSTQTSAISVLEALPDPVV
VLNHRGQITGWNPAAEELFGWYGEEVLGRPWTEFVVADGTNGNALSHLDSIGSTVQRG
GTWEGSFPITTRNGDSLLARVRAAPMMSGGMITGTVVTAIDLFGSDASRDDQQRAAAR
AAVRAAVLSRAGMQLGTSLDTGRTLAALAEILVPAFADTCVVDLLDENGVAQRLVTVH
STDTAPCPPMRSGTEIHYPARHPCDRALRTGRPVLIQGAPRVKALDQDEECDRKSLLL
DAKSLIAVPLLAPSGVRGVLAIALTEDADPTPRYDTADLELVEELAARAGLALENAAM
FDRQRTLALALQKSLLPTDLPLPDGVSIRVGYAPGAASEVSGDLYDVVELSAGRIGVV
IGDVQGRGAHAAAVMGQLRAALRAYAVLDVQPGQLLSYLDELVRGLNEEILVTCVYAI
YDPFTRRCALANAGHPPPLLASAHGTYPMEVPPDVPLGIGPLGPGGGKGAVQFEDHIF
SIPPGDVLVMYTDGVVERRDQSVDTGVRTLCLAIERVVREPRAICRAALRAAGSEAHD
DQAVLAMATSTVDLPLSRLALPARPEAAFAARHHTRAVLREWGLSEHAELAELLVSEL
ITNAVRHASGPRPTPWSFSDSDQYSDPEPPPMAEDMMELAAVREYADHLGALDEENEL
DLLAEPGLLDELGMLDGTLAAPGGSRRLDLVLRRGLRALWIEVHDPDVRLPRIRQAAE
TDEGGRGLYLVDALSARWGARPTDAGKFVWFEIPLF"
misc_feature complement(113511..113840)
/locus_tag="Caci_0109"
/note="PAS fold; Region: PAS; pfam00989"
/db_xref="CDD:216228"
misc_feature complement(113508..113825)
/locus_tag="Caci_0109"
/note="PAS domain; PAS motifs appear in archaea,
eubacteria and eukarya. Probably the most surprising
identification of a PAS domain was that in EAG-like
K+-channels. PAS domains have been found to bind ligands,
and to act as sensors for light and oxygen in...; Region:
PAS; cd00130"
/db_xref="CDD:238075"
misc_feature complement(order(113592..113594,113607..113609,
113697..113708,113745..113747,113763..113765,
113775..113777))
/locus_tag="Caci_0109"
/note="putative active site [active]"
/db_xref="CDD:238075"
misc_feature complement(order(113565..113567,113571..113573,
113655..113660,113667..113669,113703..113705,
113715..113717))
/locus_tag="Caci_0109"
/note="heme pocket [chemical binding]; other site"
/db_xref="CDD:238075"
misc_feature complement(<113043..113402)
/locus_tag="Caci_0109"
/note="GAF domain; Region: GAF; cl17456"
/db_xref="CDD:248010"
misc_feature complement(112221..>112922)
/locus_tag="Caci_0109"
/note="Serine phosphatase RsbU, regulator of sigma subunit
[Signal transduction mechanisms / Transcription]; Region:
RsbU; COG2208"
/db_xref="CDD:225118"
misc_feature complement(112221..112787)
/locus_tag="Caci_0109"
/note="Stage II sporulation protein E (SpoIIE); Region:
SpoIIE; pfam07228"
/db_xref="CDD:219343"
gene complement(114008..114655)
/locus_tag="Caci_0110"
/db_xref="GeneID:8331435"
CDS complement(114008..114655)
/locus_tag="Caci_0110"
/inference="protein motif:TFAM:TIGR02727"
/note="TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase;
PFAM: 5-formyltetrahydrofolate cyclo-ligase;
KEGG: sco:SCO3183 hypothetical protein"
/codon_start=1
/transl_table=11
/product="5-formyltetrahydrofolate cyclo-ligase"
/protein_id="YP_003110906.1"
/db_xref="GI:256389342"
/db_xref="InterPro:IPR002698"
/db_xref="GeneID:8331435"
/translation="MTNQFNEPGLAKGTIRSRLLAARRAYAPELRAAWAATACEVLVG
QMSGADVVAAYASFGTEPDTGPLLAELRGRGIRVLLPILENDMDLSWGRYSGPDSLVR
RIPPGGSAPGPIPEPAESLGLDAVLSASWIVVPALAVSPAGIRMGRGGGSYDRVLTRI
EASPRGARPRVAALLYPGELGVDIPVEPHDRAVDMAVAGESVRHWDESPGGVLSR"
misc_feature complement(114065..>114511)
/locus_tag="Caci_0110"
/note="5-formyltetrahydrofolate cyclo-ligase [Coenzyme
metabolism]; Region: COG0212; cl00360"
/db_xref="CDD:241814"
gene 114697..115383
/locus_tag="Caci_0111"
/db_xref="GeneID:8331436"
CDS 114697..115383
/locus_tag="Caci_0111"
/inference="protein motif:TFAM:TIGR00254"
/note="KEGG: ace:Acel_0165 diguanylate cyclase with GAF
sensor;
TIGRFAM: diguanylate cyclase;
PFAM: GGDEF domain containing protein;
SMART: GGDEF domain containing protein"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase"
/protein_id="YP_003110907.1"
/db_xref="GI:256389343"
/db_xref="InterPro:IPR000160"
/db_xref="GeneID:8331436"
/translation="MSLTAVVLVLLAAAAVALAGMNLALRRRLEHLEETTRTALAQAA
SEVTGLEQGREDLERLSALDPLTGVWNYRYLQGALGRELEAARATGIGGALLMIDVDD
FRRVNAGYGHQRGSAVLRELAQRLALEVRHADTFARYGGEEFVLILPGTNADTAAKVA
ERLCYAVRKLTFDAGPDTDSEQGPFQLTISVGGVIFPDHGTHAATLLRVADEQLMAAK
RDSHGSWRIT"
sig_peptide 114697..114756
/locus_tag="Caci_0111"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.986 at
residue 20"
misc_feature 114826..115377
/locus_tag="Caci_0111"
/note="c-di-GMP synthetase (diguanylate cyclase, GGDEF
domain) [Signal transduction mechanisms]; Region:
COG2199"
/db_xref="CDD:225109"
misc_feature 114886..115353
/locus_tag="Caci_0111"
/note="Diguanylate-cyclase (DGC) or GGDEF domain; Region:
GGDEF; cd01949"
/db_xref="CDD:143635"
misc_feature order(114991..114993,115120..115122)
/locus_tag="Caci_0111"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(115006..115008,115015..115020,115030..115032,
115042..115044,115108..115110,115114..115125)
/locus_tag="Caci_0111"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(115096..115098,115180..115182)
/locus_tag="Caci_0111"
/note="I-site; other site"
/db_xref="CDD:143635"
gene 115398..116318
/locus_tag="Caci_0112"
/db_xref="GeneID:8331437"
CDS 115398..116318
/locus_tag="Caci_0112"
/inference="protein motif:TFAM:TIGR01099"
/note="TIGRFAM: UTP-glucose-1-phosphate
uridylyltransferase;
PFAM: nucleotidyl transferase;
KEGG: sma:SAV_3673 UTP:glucose-1-phosphate
uridylyltransferase"
/codon_start=1
/transl_table=11
/product="UTP-glucose-1-phosphate uridylyltransferase"
/protein_id="YP_003110908.1"
/db_xref="GI:256389344"
/db_xref="InterPro:IPR005771"
/db_xref="InterPro:IPR005835"
/db_xref="GeneID:8331437"
/translation="MVEVRKAVIPSAGLGTRFLPATKATPKEMLPVIDKPTIQYVVEE
AVTAGLTDILMVTGRNKRPLEDHFDRAAELEEALEAKGDKVRLQQVRASAEMANVHYV
RQGDPKGLGHAVLKAESYVHGEPFAVLLGDDFIDERDPLLPAMIAVRQRYGGSVVGLI
EVPEEQIHMYGCAAVKPAVDGPDLGHDHTSLIQITDLVEKPSVAQAPSNLAVIGRYVL
DPAVMGVLRETAPGRGGEIQLTDALRTLAGDPDIGGPVHGVVFTGRRYDTGNPIDYLK
TVVQLAVDRPDLGGEFRDWLSSYVRAGFHD"
misc_feature 115410..116243
/locus_tag="Caci_0112"
/note="Prokaryotic UGPase catalyses the synthesis of
UDP-glucose; Region: UGPase_prokaryotic; cd02541"
/db_xref="CDD:133021"
misc_feature 115410..116225
/locus_tag="Caci_0112"
/note="dTDP-glucose pyrophosphorylase [Cell envelope
biogenesis, outer membrane]; Region: RfbA; COG1209"
/db_xref="CDD:224130"
misc_feature order(115425..115436,115476..115481,115707..115709,
115716..115727,115785..115787,115791..115796,
115905..115910,115992..115997,116031..116033,
116115..116117)
/locus_tag="Caci_0112"
/note="active site"
/db_xref="CDD:133021"
misc_feature order(115437..115439,115446..115460,115464..115472,
115482..115490,115494..115502,115512..115514,
115584..115586,115590..115598,115602..115604,
115614..115619,115701..115706,115710..115712,
115716..115718,115902..115904,116103..116105,
116187..116189,116205..116213,116217..116225,
116229..116237)
/locus_tag="Caci_0112"
/note="tetramer interface; other site"
/db_xref="CDD:133021"
gene 116350..117591
/locus_tag="Caci_0113"
/db_xref="GeneID:8331438"
CDS 116350..117591
/locus_tag="Caci_0113"
/inference="protein motif:TFAM:TIGR00177"
/note="TIGRFAM: molybdenum cofactor synthesis domain
protein;
PFAM: MoeA domain protein domain I and II; MoeA domain
protein domain IV; molybdopterin binding domain;
KEGG: ace:Acel_0167 molybdopterin molybdochelatase"
/codon_start=1
/transl_table=11
/product="molybdenum cofactor synthesis domain-containing
protein"
/protein_id="YP_003110909.1"
/db_xref="GI:256389345"
/db_xref="InterPro:IPR001453"
/db_xref="InterPro:IPR005110"
/db_xref="InterPro:IPR005111"
/db_xref="GeneID:8331438"
/translation="MSDSENARMRSVDDHLKTVLDTVQLLAPMELPITDVNGLVLAED
VVSAISLPPFDNSSVDGYAVRLADLEGAAEDSPAELRVLGDVAAGSVHEGILEPGTCL
RIMTGAMVPHGAEAVVPVEWTDGGTESVRITRVPERDEHIRVLGSDVAAGDVVLKAGT
RLGPRQIGLLAAIGQVHAPVHPHPRVVVLSTGSELVEPGTPLGPGQINDGNGPALTAA
VNAMGATGIRVGIIGDDPQGVLDAIEDQLIRADMVVTTGGVSVGAYDVVKEVLSTLGT
VEFTKVAMQPGMPQGFGTVGEDRIPIFTLPGNPVSAYVSFEIYIRPAIEKMMGIETGP
RETVTATCFGAFTSPSGKRQFARGIYDPHGLSVRPVGGHGSHLVGDLALANALIVVPE
YVTEVVDGDDVEVIVMEGGPR"
misc_feature 116362..117525
/locus_tag="Caci_0113"
/note="Molybdopterin biosynthesis enzyme [Coenzyme
metabolism]; Region: MoeA; COG0303"
/db_xref="CDD:223380"
misc_feature 116383..117525
/locus_tag="Caci_0113"
/note="MoeA family. Members of this family are involved in
biosynthesis of the molybdenum cofactor (MoCF), an
essential cofactor of a diverse group of redox enzymes.
MoCF biosynthesis is an evolutionarily conserved pathway
present in eubacteria, archaea and...; Region: MoeA;
cd00887"
/db_xref="CDD:238452"
misc_feature order(116449..116451,116791..116793,116836..116847,
116851..116853,116860..116865,116869..116871,
116971..116973,116977..116979,116986..116988,
117361..117363,117475..117477)
/locus_tag="Caci_0113"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238452"
misc_feature order(116920..116925,116929..116931,117049..117051,
117121..117123)
/locus_tag="Caci_0113"
/note="putative functional site; other site"
/db_xref="CDD:238452"
misc_feature order(117121..117129,117265..117270,117280..117282,
117289..117291)
/locus_tag="Caci_0113"
/note="putative MPT binding site; other site"
/db_xref="CDD:238452"
gene 117588..118124
/locus_tag="Caci_0114"
/db_xref="GeneID:8331439"
CDS 117588..118124
/locus_tag="Caci_0114"
/inference="protein motif:TFAM:TIGR00581"
/note="TIGRFAM: molybdenum cofactor biosynthesis protein
C;
PFAM: molybdopterin cofactor biosynthesis MoaC region;
KEGG: sma:SAV_3671 molybdenum cofactor biosynthesis
protein C"
/codon_start=1
/transl_table=11
/product="molybdenum cofactor biosynthesis protein C"
/protein_id="YP_003110910.1"
/db_xref="GI:256389346"
/db_xref="InterPro:IPR002820"
/db_xref="GeneID:8331439"
/translation="MSSETSGTVETSGVAEAPGGKSDRLTHIDSTGDARMVDVTAKPV
SARQARATGFVEVSPKVVELLRGEGMPKGDALSVARIAGIMGAKKTPDLVPLCHPIAI
SGVKVALEVEDSGVAIAATVKTADRTGVEMEALTAVAVAGLTVIDMVKAVDPAAVLTR
VQVEAKSGGVSGDWSREG"
misc_feature 117651..118121
/locus_tag="Caci_0114"
/note="molybdenum cofactor biosynthesis protein MoaC;
Provisional; Region: moaC; PRK09364"
/db_xref="CDD:236483"
misc_feature order(117693..117704,117807..117884,117891..117911,
118059..118094)
/locus_tag="Caci_0114"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:238293"
misc_feature order(117801..117809,117855..117869,118044..118052)
/locus_tag="Caci_0114"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238293"
misc_feature order(117801..117803,117849..117851,117870..117872,
117876..117881,117969..117971,117978..117986,
117993..117995,118026..118028,118035..118037)
/locus_tag="Caci_0114"
/note="putative active site [active]"
/db_xref="CDD:238293"
gene 118256..119920
/locus_tag="Caci_0115"
/db_xref="GeneID:8331440"
CDS 118256..119920
/locus_tag="Caci_0115"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: rha:RHA1_ro10371 major facilitator superfamily
multidrug resistance protein"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily protein"
/protein_id="YP_003110911.1"
/db_xref="GI:256389347"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331440"
/translation="MTDTSTAAAPPPENDTGRLDGASRARIFSVIVVVVLFAEVAPLQ
YTMVSPAAQLIGRSFPGVGSNIAWMTIIFGLVGGAATPILGKLSDLYGKRNMLLAVGI
SFLIGSLICATTSNWTMFLIGRAFQAVAIAAATVAYGLIRDLIPRKYVPLAIGLVSTG
LGVSGVGGIMLSGVLTDTAGWSYKALFWFLVIYTLVTLPLLFLVCPETKFRARQKLDP
FGALLLAGGVGFALLYVSNGANVGWSDPLYLGYLLLGVVLMAGFVLLERRVSQPIIDL
RLLFSPKVSVVLFIAFFAAIVVGIQAFSIPYMVSTPSHDGLIAMTQQGAAARFKGLVQ
PNQIPVKVLGDIGYGLGFTLLGLAFHVQVWGSSVSMFSGAASGQLSGKIGARKPLLIG
MLTFAATSGIYAAAHHGALTLALVGIVFGVGFGAYYATTPNLLVEASPPEQQGITAGM
LGVSNSIGTAVGTAIAAAFQAAHPVRLIVAGQTVLAGTPDPKTGVTERAGVFTDTAYT
QIFIACAIAGFIALAATFFMRSGRTASTGGLGYLTDPAPAKETAPA"
misc_feature 118376..119632
/locus_tag="Caci_0115"
/note="drug resistance transporter, EmrB/QacA subfamily;
Region: efflux_EmrB; TIGR00711"
/db_xref="CDD:129794"
misc_feature 118388..>118627
/locus_tag="Caci_0115"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(119946..121391)
/locus_tag="Caci_0116"
/db_xref="GeneID:8331441"
CDS complement(119946..121391)
/locus_tag="Caci_0116"
/inference="protein motif:PFAM:PF00355"
/note="PFAM: Rieske [2Fe-2S] domain protein;
KEGG: mxa:MXAN_3480 iron-sulfur cluster-binding protein,
Rieske family"
/codon_start=1
/transl_table=11
/product="Rieske (2Fe-2S) domain-containing protein"
/protein_id="YP_003110912.1"
/db_xref="GI:256389348"
/db_xref="InterPro:IPR005806"
/db_xref="GeneID:8331441"
/translation="MRGPLMSSTGHAGLRVETPDLRLLCDPWVSPGGAFLGSRFPFPD
NSHLRAVPRLLEAEWVAVSSAQADHMDVEFLSGLDESVRVVIPAYPSSVLHDRLSAAG
VKNIVEVEGWQRVPLTDRGDWLTVVPEQSPMAHRAAFLVVADGVSVLHCNDARLSLSQ
TRRAMIEVGGPLDLLALDASEERFRAVKRLVRAVKPRLVMPYGGPGCFLDPELMEHNA
VVAPGELPAETLTLLPGDSVRITPTSYECVRDPHWEGFAYSDSVAVANHLETYAASRA
QEIADVWEAYPDPDAGSGLEDRFAEHFVRLGRMSPYFLERIAMTVRFKVAGADGGVWD
VHLGTTDETAQYTFRVEARWLEAVLGGEIRWEDLLLSRRIHVEHAPEADGSYLFGLLM
HADADALQAIEDYDKRDPDSTVTLTSGDRTFEVTRYCPHSGEDLAEGAVIDEAPEGLV
LRCLAHNFDFSLTTGLCLNARCEPIVVAAPV"
misc_feature complement(120678..121364)
/locus_tag="Caci_0116"
/note="Predicted Zn-dependent hydrolases of the
beta-lactamase fold [General function prediction only];
Region: COG2220"
/db_xref="CDD:225130"
misc_feature complement(119949..>120146)
/locus_tag="Caci_0116"
/note="Rieske domain; a [2Fe-2S] cluster binding domain
commonly found in Rieske non-heme iron oxygenase (RO)
systems such as naphthalene and biphenyl dioxygenases, as
well as in plant/cyanobacterial chloroplast b6f and
mitochondrial cytochrome bc(1) complexes; Region: Rieske;
cl00938"
/db_xref="CDD:242206"
misc_feature complement(order(120012..120014,120018..120020,
120024..120029,120033..120035,120096..120101,
120105..120107))
/locus_tag="Caci_0116"
/note="iron-sulfur cluster [ion binding]; other site"
/db_xref="CDD:239550"
misc_feature complement(order(120018..120020,120024..120026,
120033..120035,120096..120101,120105..120107))
/locus_tag="Caci_0116"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:239550"
gene complement(121480..122364)
/locus_tag="Caci_0117"
/db_xref="GeneID:8331442"
CDS complement(121480..122364)
/locus_tag="Caci_0117"
/inference="similar to AA sequence:KEGG:Tfu_0410"
/note="KEGG: tfu:Tfu_0410 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110913.1"
/db_xref="GI:256389349"
/db_xref="InterPro:IPR008265"
/db_xref="GeneID:8331442"
/translation="MHVPKLGLRKAAALAAAALCGLAVSAGPASASDGWKHQPYDYYL
ALGDSLGAGWQPNAVTGQGYISGHGYADDIAASLKLQGGKYVNLACPGETTGSMIHGG
CPYPEPYKNQLDAAASFLKAHKGDRVLVTLDIGANDVDGCASATGLDIQCGLTGIQQT
SQDLPVILRTLRAAAGHKTEFVGSTYYNPFLASWLTGSAGQSNAKLSAAFLNLFNAVF
AIEYPLNGVRVADVSAAFSSNDFVHQVTLQPGVTVPLNVARICQWTWMCAPAPVGPNI
HANDAGYTVMAKAFEAVI"
sig_peptide complement(122269..122364)
/locus_tag="Caci_0117"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.994 at
residue 32"
misc_feature complement(<121840..122235)
/locus_tag="Caci_0117"
/note="GDSL-like Lipase/Acylhydrolase family; Region:
Lipase_GDSL_2; pfam13472"
/db_xref="CDD:222156"
misc_feature complement(order(121954..121956,122089..122091,
122218..122220))
/locus_tag="Caci_0117"
/note="active site"
/db_xref="CDD:238141"
misc_feature complement(order(121954..121956,122089..122091,
122218..122220))
/locus_tag="Caci_0117"
/note="oxyanion hole [active]"
/db_xref="CDD:238141"
gene complement(122637..123221)
/locus_tag="Caci_0118"
/db_xref="GeneID:8331443"
CDS complement(122637..123221)
/locus_tag="Caci_0118"
/inference="protein motif:PFAM:PF01047"
/note="PFAM: regulatory protein MarR;
SMART: regulatory protein MarR;
KEGG: sco:SCO3133 MarR family regulatory protein"
/codon_start=1
/transl_table=11
/product="MarR family transcriptional regulator"
/protein_id="YP_003110914.1"
/db_xref="GI:256389350"
/db_xref="InterPro:IPR000835"
/db_xref="GeneID:8331443"
/translation="METPHTQGLDAATPADNGAPAPAAPAASDPQACRDEVDRLVEAW
RHERPDLDVAPLEVLSRVSRLARHLDRARRTAFAEHDLEPWEFDVLSALRRAGAPYQL
TPSKLLTQTLVTSGTMTNRIDRLAAKDLVKRLPDPGDRRGVLVQLSDTGRERVDGAFE
GLLAQERELLGGLSAGDRTTLAALLRTLVLPFDN"
misc_feature complement(<122769..123014)
/locus_tag="Caci_0118"
/note="MarR family; Region: MarR_2; cl17246"
/db_xref="CDD:247800"
misc_feature complement(122697..122999)
/locus_tag="Caci_0118"
/note="helix_turn_helix multiple antibiotic resistance
protein; Region: HTH_MARR; smart00347"
/db_xref="CDD:197670"
gene 123390..124196
/locus_tag="Caci_0119"
/db_xref="GeneID:8331444"
CDS 123390..124196
/locus_tag="Caci_0119"
/EC_number="2.1.1.144"
/inference="protein motif:PRIAM:2.1.1.144"
/note="PFAM: methyltransferase type 11; methyltransferase
type 12;
KEGG: sco:SCO3132 trans-aconitate methyltransferase"
/codon_start=1
/transl_table=11
/product="trans-aconitate 2-methyltransferase"
/protein_id="YP_003110915.1"
/db_xref="GI:256389351"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:8331444"
/translation="MADDIWNAQQYLRFENDRLRPFLDLVTQLDADGDVHTVVDLGCG
PGNGTALLVDWWPGARIVGVDSSPAMIEAAQEQAIPGQVEFELGDLRQWRADGKVDVL
LANAVLQWVPDHLDLLPDLAAQLAPGGVLGFQVPGNFEAPSHLALAEMKRRWAGRVPD
DLQKPASHDPAVYLEKLAESGLEPDVWETTYTYLVPADPDPSVPCGVTEFVRGSALRP
AIKALSESDAADFVSEYDTLARAAYPVRELGGHSVQLLPYRRIFAIGRTV"
misc_feature 123405..124175
/locus_tag="Caci_0119"
/note="Trans-aconitate methyltransferase [General function
prediction only]; Region: Tam; COG4106"
/db_xref="CDD:226591"
misc_feature 123498..>123722
/locus_tag="Caci_0119"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(123510..123530,123582..123587,123651..123659,
123702..123704)
/locus_tag="Caci_0119"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 124248..124604
/locus_tag="Caci_0120"
/db_xref="GeneID:8331445"
CDS 124248..124604
/locus_tag="Caci_0120"
/inference="protein motif:PFAM:PF00903"
/note="PFAM: glyoxalase/bleomycin resistance
protein/dioxygenase;
KEGG: stp:Strop_4178 hypothetical protein"
/codon_start=1
/transl_table=11
/product="glyoxalase/bleomycin resistance
protein/dioxygenase"
/protein_id="YP_003110916.1"
/db_xref="GI:256389352"
/db_xref="InterPro:IPR004360"
/db_xref="GeneID:8331445"
/translation="MLAALHHAQVAVPKGAEDVSRAYYVGVLGMTELPKPPVLAARGG
CWFAAGGLEIHTGVEEPFIPARKAHPAILVTDIDELAAALTAAGHEVAWDQTIPDKRR
LHTFDPHGNRLEFIQQ"
misc_feature 124260..124592
/locus_tag="Caci_0120"
/note="This conserved domain belongs to a superfamily
including the bleomycin resistance protein, glyoxalase I,
and type I ring-cleaving dioxygenases; Region:
Glo_EDI_BRP_like_9; cd07245"
/db_xref="CDD:176669"
misc_feature 124260..124592
/locus_tag="Caci_0120"
/note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily; Region: Glyoxalase; pfam00903"
/db_xref="CDD:216182"
misc_feature order(124260..124274,124278..124280,124326..124331,
124335..124337,124383..124385,124392..124397,
124404..124406,124449..124472,124482..124487,
124494..124496,124587..124592)
/locus_tag="Caci_0120"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:176669"
misc_feature order(124266..124268,124452..124454,124587..124589)
/locus_tag="Caci_0120"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:176669"
gene complement(124668..125171)
/locus_tag="Caci_0121"
/db_xref="GeneID:8331446"
CDS complement(124668..125171)
/locus_tag="Caci_0121"
/inference="protein motif:PFAM:PF06210"
/note="PFAM: protein of unknown function DUF1003;
KEGG: mab:MAB_1523c hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110917.1"
/db_xref="GI:256389353"
/db_xref="InterPro:IPR010406"
/db_xref="GeneID:8331446"
/translation="MAREYIPPRLDQPRGRRQVSLKPSFDPDAFGRVSETIARFFGTA
RYLFIQSLIVVIWIALNILVVTKAIRWDPYPFILLNLAFSTQAAYAAPLILLAQNRQA
ERDKVQIAEDKAREELSFATMEYLTREIASLRMAVGEVATRDYVRGELQSLLKELDER
GRDYSGE"
misc_feature complement(124725..125051)
/locus_tag="Caci_0121"
/note="Protein of unknown function (DUF1003); Region:
DUF1003; pfam06210"
/db_xref="CDD:148049"
gene complement(125172..126536)
/locus_tag="Caci_0122"
/db_xref="GeneID:8331447"
CDS complement(125172..126536)
/locus_tag="Caci_0122"
/inference="protein motif:PFAM:PF03448"
/note="PFAM: MgtE intracellular region; CBS domain
containing protein;
KEGG: ace:Acel_1818 MgtE intracellular region"
/codon_start=1
/transl_table=11
/product="MgtE integral membrane protein"
/protein_id="YP_003110918.1"
/db_xref="GI:256389354"
/db_xref="InterPro:IPR000644"
/db_xref="InterPro:IPR006668"
/db_xref="GeneID:8331447"
/translation="MRALSRVYVSHLAGRSVFDADGEPVGRIRDIVVSMGAGDAAPRV
LGLVLEMQMHGRRRVFLPIGRVTSIESNQVVSTGLVNMRHFQQRPGETLVLTELLDRR
VTLKATGETATVRDVAFEPERAGKEMALTKLFVQKAAKTTGLRRRGESLTVDWDAVEG
LEVSGAQGAAELVAALDKLHAADLAHVMHELSPRRRGEVAAALDDERLADVMEELPED
DQVEILGELESERAADVLEAMDPDDAADLLGELSADEAERLLALMEPQDANPVRRLLS
YREDTAGGLMNSDPIILLPNATVAEALALVRDEERTPANASLVFVTRAPTETPTGRYL
GAVHIQRLLREPPMALVSAAVDVELEPLAPDTMLNEVTAYMATYNLVAVPVVDADDRL
LGAVTVDDVLDHLLPDDWRLRPPGSHPHDELPPEAREVVELLEGQDAADGAPSPIRTG
PGEG"
misc_feature complement(<126342..126518)
/locus_tag="Caci_0122"
/note="PRC-barrel domain; Region: PRC; pfam05239"
/db_xref="CDD:218519"
misc_feature complement(<126159..126503)
/locus_tag="Caci_0122"
/note="PRC-barrel domain containing protein [General
function prediction only]; Region: COG3881"
/db_xref="CDD:226398"
misc_feature complement(125691..125975)
/locus_tag="Caci_0122"
/note="MgtE intracellular N domain; Region: MgtE_N;
smart00924"
/db_xref="CDD:214915"
misc_feature complement(<125355..125969)
/locus_tag="Caci_0122"
/note="Mg/Co/Ni transporter MgtE (contains CBS domain)
[Inorganic ion transport and metabolism]; Region: MgtE;
COG2239"
/db_xref="CDD:225148"
misc_feature complement(125355..125663)
/locus_tag="Caci_0122"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domain in the
magnesium transporter, MgtE. MgtE and its homologs are
found in eubacteria, archaebacteria, and eukaryota.
Members of this family transport Mg2+ or other...; Region:
CBS_pair_Mg_transporter; cd04606"
/db_xref="CDD:239979"
gene 126813..127631
/locus_tag="Caci_0123"
/db_xref="GeneID:8331448"
CDS 126813..127631
/locus_tag="Caci_0123"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sma:SAV_3109 lipoprotein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110919.1"
/db_xref="GI:256389355"
/db_xref="GeneID:8331448"
/translation="MAIAAVAALAGCGSTGTNGVAKKGAGSIVATAEGAVLNATSVHI
QGQFTSGNQPVALDLRLEKDKGASGTVTIGTEVLELLRVGPDVYVKGDEAFYRSVLSR
LGTASAPAPSAPSAPSTSGSASGSSSKSPSAAGSSSAGTSTTGTPSAGQSSSDNSIAV
TAMQINYLHIGPTDAQYQTFASLTDPRQLLAQIMQGIGSLGKDGQKDIRGTKSIVLSG
SKDTRVYVAIDGQPFLERVLPPGGGTLDFMDYNTPVTLNPPPPGQVVDIAKIAK"
sig_peptide 126813..126872
/locus_tag="Caci_0123"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.858) with cleavage site probability 0.544 at
residue 20"
gene complement(127663..128745)
/locus_tag="Caci_0124"
/db_xref="GeneID:8331449"
CDS complement(127663..128745)
/locus_tag="Caci_0124"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110920.1"
/db_xref="GI:256389356"
/db_xref="GeneID:8331449"
/translation="MTDDELALQRDLDEELNRLQPRPVPTEAVYGRARELRRTRRMWA
AGVLATAAVVGTSLPILGSMGLRQNAAGGGQAVTVNTPHTDKKGRYVFSGSEEGKRWS
TTVAPGDCPSSGSFNLNVACNASSGSDPAELSYAAPAGLPTTYAIYFRSDIARIDMTL
SDGGQATLVPGIVRGNRVALVVIPPKIEITRVDVFAADGSPVGFSIPFQADGMAHLAM
WYQPGQTPTQPEASGTITGITQKGEHASVGVRIGPFGICYTVAQRSTPGAVPITNCRP
FSAAASDDVPPNPPDWVALGGLVDDRVDHVDFALTTGTIRVQTVRIGAYSFAVGFADY
SFTSLGETAYDASGHVIDREQTPSKS"
gene complement(128742..129254)
/locus_tag="Caci_0125"
/db_xref="GeneID:8331450"
CDS complement(128742..129254)
/locus_tag="Caci_0125"
/inference="protein motif:TFAM:TIGR02983"
/note="TIGRFAM: RNA polymerase sigma-70 factor, sigma-E
family; RNA polymerase sigma factor, sigma-70 family;
PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain
protein; sigma-70 region 4 domain protein;
KEGG: fre:Franean1_0089 ECF subfamily RNA polymerase
sigma-24 factor"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-24 subunit"
/protein_id="YP_003110921.1"
/db_xref="GI:256389357"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="InterPro:IPR014325"
/db_xref="GeneID:8331450"
/translation="MRADEDGHDAEFHAFMVGRWPSLVRFAYGLTGDHGHAEDLAQAA
LAKALVSWSRVRRADDPDAYVRRILINLNRRRFRRRRVEEHVGGEAPEPAAPDSTDQL
DQRATLIPALMELPPGQRAVVILRYWDGLTETQTAAILGCSVGNVRSQASRALARLRT
NPRLHDGSAS"
misc_feature complement(128814..129239)
/locus_tag="Caci_0125"
/note="RNA polymerase sigma-70 factor, sigma-E family;
Region: SigE-fam_strep; TIGR02983"
/db_xref="CDD:132028"
misc_feature complement(<128814..128942)
/locus_tag="Caci_0125"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(128817..128822,128826..128828,
128856..128861,128877..128879,128907..128909))
/locus_tag="Caci_0125"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene complement(129322..130161)
/locus_tag="Caci_0126"
/db_xref="GeneID:8331451"
CDS complement(129322..130161)
/locus_tag="Caci_0126"
/inference="protein motif:PFAM:PF01663"
/note="PFAM: type I phosphodiesterase/nucleotide
pyrophosphatase;
KEGG: aau:AAur_0159 type I phosphodiesterase / nucleotide
pyrophosphatase family protein"
/codon_start=1
/transl_table=11
/product="type I phosphodiesterase/nucleotide
pyrophosphatase"
/protein_id="YP_003110922.1"
/db_xref="GI:256389358"
/db_xref="InterPro:IPR002591"
/db_xref="GeneID:8331451"
/translation="MSTSRVLVIGIDGTRLDFLDAEPTPNIDRVAGEGFLATVWVEDG
TPTVSGPCWATAVTGTTIERHHIGSNDFAGHRLAEHPDFLTVLTRDFGLHTYLAVGAW
PPLATPADHGPMFAAPSRLTFATFGQSAQACDQGDETITRDAERILATENIHAAFVYL
GANDATAHDQGCGDLYRTAIRRTDARTGRLLAAVASRPDRATENWTFILLTDHGHLPE
GGHGGTTTPERTAWIAACGPGIQAGADYGTLRHVDVAAHVYAALGVEPEIVLDGKAFQ
TMH"
misc_feature complement(<129526..130146)
/locus_tag="Caci_0126"
/note="Type I phosphodiesterase / nucleotide
pyrophosphatase; Region: Phosphodiest; pfam01663"
/db_xref="CDD:216635"
gene complement(130199..131221)
/locus_tag="Caci_0127"
/db_xref="GeneID:8331452"
CDS complement(130199..131221)
/locus_tag="Caci_0127"
/inference="protein motif:PFAM:PF02826"
/note="PFAM: D-isomer specific 2-hydroxyacid dehydrogenase
NAD-binding;
KEGG: sma:SAV_2089 2-hydroxyacid dehydrogenase"
/codon_start=1
/transl_table=11
/product="D-isomer specific 2-hydroxyacid dehydrogenase
NAD-binding subunit"
/protein_id="YP_003110923.1"
/db_xref="GI:256389359"
/db_xref="InterPro:IPR006140"
/db_xref="GeneID:8331452"
/translation="MAGRAAALLAMRPDVAQAAFPAALRTRLDAVVEIDHGLVVTDFA
EPRARWALAGAEVLLTGWGCPPLDAEALDAAPNLRAVIHAAGSVKHHLSPDFWTRGIL
ASSAADANAYPVAQFTLSVILLAGKRMFTMARHYAEGTYKPPSTSQRFGNVGRTVGVV
GASRIGRLVLPMLAREGFEVLLADPTLSAAEAAALMPAPWAVELVELDELLRRSDVVT
LHAPSLPETHHLLDDRRLGLMRDGSVLVNTARGALIDTEALVRCCAAGRIDAFLDVTD
PDEPLPPGHPLFLLPNVVVTPHLAGAMGSEIALLGAYAVADVERYAAGLPLLGGVHQD
DLARIA"
misc_feature complement(130202..131185)
/locus_tag="Caci_0127"
/note="Putative D-isomer specific 2-hydroxyacid
dehydrogenases; Region: 2-Hacid_dh_8; cd12167"
/db_xref="CDD:240644"
misc_feature complement(130208..131179)
/locus_tag="Caci_0127"
/note="Phosphoglycerate dehydrogenase and related
dehydrogenases [Amino acid transport and metabolism];
Region: SerA; COG0111"
/db_xref="CDD:223189"
misc_feature complement(order(130328..130330,130472..130474,
130892..130894,130961..130969,131036..131038))
/locus_tag="Caci_0127"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:240644"
misc_feature complement(order(130319..130324,130328..130330,
130400..130405,130472..130480,130541..130543,
130556..130564,130652..130660,130727..130741,
130880..130882,130892..130894,130964..130966))
/locus_tag="Caci_0127"
/note="putative NAD binding site [chemical binding]; other
site"
/db_xref="CDD:240644"
misc_feature complement(order(130328..130330,130385..130387,
130472..130474))
/locus_tag="Caci_0127"
/note="catalytic site [active]"
/db_xref="CDD:240644"
gene 131505..132464
/locus_tag="Caci_0128"
/db_xref="GeneID:8331453"
CDS 131505..132464
/locus_tag="Caci_0128"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transporters inner
membrane component;
KEGG: aau:AAur_1453 transmembrane lipoprotein LplB"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transporters inner
membrane component"
/protein_id="YP_003110924.1"
/db_xref="GI:256389360"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8331453"
/translation="MAATAAAAAAPAAAKPRAGTRWARFRRDKVLLLMMLPGVLYFGV
FQYLAQLGNIIAFKDYVPFVGIKDSAWVGFQQFSTLFADPDFWHAVRNTFELALVQLM
FFFPVPLALAMFLFSLTRNWVRKLVVSFVYLPHFISWVVVVGLFVQVLGPSGMVNSFL
THDSHHVVVNVFRDPAWFKPMMLIELVWKDCGWGTIIFLAALYQVDDSLYEAVSLDGA
GWARRTWHVTLPSIRPVLVLLLILRVGDILSVGFDQVMQQRDTFTPAAAEVIDTYVYN
HGVGSGQFSVAAVAGLLKGVVAMVLVIGANKVAHKLGEQGVYQ"
misc_feature 131565..>132188
/locus_tag="Caci_0128"
/note="ABC-type sugar transport systems, permease
components [Carbohydrate transport and metabolism];
Region: UgpA; COG1175"
/db_xref="CDD:224096"
misc_feature 131568..132458
/locus_tag="Caci_0128"
/note="ABC-type polysaccharide transport system, permease
component [Carbohydrate transport and metabolism]; Region:
LplB; COG4209"
/db_xref="CDD:226666"
gene 132461..133360
/locus_tag="Caci_0129"
/db_xref="GeneID:8331454"
CDS 132461..133360
/locus_tag="Caci_0129"
/inference="protein motif:PFAM:PF00528"
/note="PFAM: binding-protein-dependent transporters inner
membrane component;
KEGG: aau:AAur_1454 transmembrane lipoprotein LplC"
/codon_start=1
/transl_table=11
/product="binding-protein-dependent transporters inner
membrane component"
/protein_id="YP_003110925.1"
/db_xref="GI:256389361"
/db_xref="InterPro:IPR000515"
/db_xref="GeneID:8331454"
/translation="MSAESPNLRPAWMGRPKPAVSALKAAAVVVILALIAVPFWLVLA
TSVSSDAEVNANGGWSLWPDKLDFSAYTNVFQGGTIGHALWVSVLVTALGTAASLAST
TFLAYALSRPNVVAGKPILLAVLFTFLFPAGMIPSFLVVTDLHLFDHLAALFVPVMIN
VFNLVVMRGFFQGIPEELYEAARLDGAGDLRTLFRIVLPLSKAIIAVVGLYYAVGYWN
DYFRAMLYTNGGSLNPLSTVLRGFVIAGNNPNAEAGVDITGIAPMKAISALVVIAIVP
IAAAFPFLQRYFTKGVMTGAVKS"
misc_feature 132575..133354
/locus_tag="Caci_0129"
/note="ABC-type sugar transport system, permease component
[Carbohydrate transport and metabolism]; Region: UgpE;
COG0395"
/db_xref="CDD:223472"
misc_feature <132815..133162
/locus_tag="Caci_0129"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cd06261"
/db_xref="CDD:119394"
misc_feature order(132815..132841,133112..133129)
/locus_tag="Caci_0129"
/note="conserved gate region; other site"
/db_xref="CDD:119394"
misc_feature order(132839..132841,132914..132916,133130..133132)
/locus_tag="Caci_0129"
/note="putative PBP binding loops; other site"
/db_xref="CDD:119394"
misc_feature order(132989..133027,133043..133048,133058..133060)
/locus_tag="Caci_0129"
/note="ABC-ATPase subunit interface; other site"
/db_xref="CDD:119394"
gene 133375..135060
/locus_tag="Caci_0130"
/db_xref="GeneID:8331455"
CDS 133375..135060
/locus_tag="Caci_0130"
/inference="protein motif:PFAM:PF01547"
/note="PFAM: extracellular solute-binding protein family
1;
KEGG: aau:AAur_1455 lipoprotein precursor LplA"
/codon_start=1
/transl_table=11
/product="extracellular solute-binding protein"
/protein_id="YP_003110926.1"
/db_xref="GI:256389362"
/db_xref="InterPro:IPR006059"
/db_xref="InterPro:IPR006311"
/db_xref="GeneID:8331455"
/translation="MPFTSTAQQISRRTVLRTTGAAAVAAVAVPALAACGGSKTSSGA
AQSNVDKKLMAWPTYTPAAGLHPDMPGTAAGVQDTFLRYPSNLIQSVPAKPGDGSKVR
ALIVTYGTQPKGPDQNQLWKAVNDAVGVDLELTMVTDADWQTKLGAMMAASDLPDIIM
LGLYQLPNEAQFLQAKCEPLGQYLAGDAGAKAYPNLAAIPPYSWDSVGRVGGDFYGIP
IHRPRLGNSFFADSDLFQQAGIWNPKPGGLSKAELTAGLMKLNTQGHFALGTNKVASF
GYLTHSGVHGTPNLWSLANGQFTTAYGTDSMKQSLATMADWYGKGLYDPAALTVSSTQ
CKTDFQNGTYVTTTDGFGGFGGYATAVNEKWKVDFVRPFDAGTGAKPTPWLTPGYFGY
TVLKKTTPERAKMLLGVLNFLAAPFGSKEWELINYGLEGVHFNRGADGGPSAPTALGK
IENSVNVPVKYVMAAPLVNYLAGEPEAAKRCYQAQVDIVPIGVTDPSLGVQSATRNKQ
WPTLLQQIQDGMNQIITGKAQLSSWDDVIKKWKSSGGDQIAAELGAEYAKTHG"
sig_peptide 133375..133476
/locus_tag="Caci_0130"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.733 at
residue 34"
misc_feature 133759..134955
/locus_tag="Caci_0130"
/note="ABC-type sugar transport system, periplasmic
component [Carbohydrate transport and metabolism]; Region:
UgpB; COG1653"
/db_xref="CDD:224567"
gene 135108..136808
/locus_tag="Caci_0131"
/db_xref="GeneID:8331456"
CDS 135108..136808
/locus_tag="Caci_0131"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: rlt:Rleg2_5337 heparinase II/III family
protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110927.1"
/db_xref="GI:256389363"
/db_xref="GeneID:8331456"
/translation="MSYLAALEDEVRDVVARAAGSAAPELTYTLYRQFGDTGHRFSYE
HPYFERRGRLVAAGAAAIFDLRTDSAVSPEVLAVLADELWRICDEHTWALPAHEQYAR
DGDMRRNVDLFAAETAHTVADLIERFGKQLPEDVIMRCREELLDRVFIPFADDQRPMA
FEKMTNNWLAVVAGGVGMAALAFFPDDAKRLAMILKRAQKSLRRFIEYYPADGGCSEG
MDYWVYGFGYFAYFAEAWRERGGPDLLLDTKIREIAAFPARVGFGDGRFPSFSDGSET
ATIPTGLMARLVERLGVPVPRIETVPTFASDFCHRWPHLSKNIEWTTERVLNRAASPG
VSYLPDLAWVVDCGGEAEFAAKGGHNDEFHNHLDVGQFILRAHSETFLADLGAGEYTA
DYFGTKRYQHVHTAAEGHSLPVIDGRGQLPGAQHAAKVERFAETGQGAILTLDMTSAY
EVPGLLALGRRFTWQRHGSLVVVDRVETDRPMPFEELYISRIRPVLEADRVVWEGEAA
RCVLTWQETLAMTPELETIETTGHRGELESVFRVRLRCMIEAGASRLESVFTVERKER
"
misc_feature 136152..136535
/locus_tag="Caci_0131"
/note="Heparinase II/III-like protein; Region:
Hepar_II_III; cl15421"
/db_xref="CDD:246956"
gene 136808..138706
/locus_tag="Caci_0132"
/db_xref="GeneID:8331457"
CDS 136808..138706
/locus_tag="Caci_0132"
/inference="similar to AA sequence:KEGG:SAV_2106"
/note="KEGG: sma:SAV_2106 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110928.1"
/db_xref="GI:256389364"
/db_xref="GeneID:8331457"
/translation="MAGALDVPEDRRASPYTGWTREHWLAQADHLLDSVKPFASPSSA
RFELPGRPSVSGFDSDALEGFARTFLLAAWRIVADQGRGPVAEDLIARYSSGLAAGAD
AAHPEAWPRIPQGRPGQPMVEAASIALGLHYTREWLWDKLDTRAQGLVADWLGEFVGN
PTWPNNWMLFQTVTEEFLSSIGAEYEESEILRGLDATEEWYVGDGWYTDGAGRNFDYY
IGWAMHLYPLVWTQMAEGGARNDRALAAREVYRDRLRQFLERYFDFFGADGAPIHQGR
SLTYRFAAAAPIWVGEMFDCSPYGAGLSRRAASGVMKHFAEHGAPDERGLLTLGWHEP
FLPMVQNYSGPASPYWASKGFIGLMLPADHRVWTAPESPLPVEVADFETAIGPVGWSL
SGTKRDGVVRLLNHGSDKARHHTTPLAEYTDAFYSPLAFSTVTAPDTEAEAWAKRVGN
HVALIAPDGRVTSRAVIEPIGAAAEWGASRHVPGFEEEPGGTVRGVEGAEIETQTFVK
EGAEIRVHRVTAPAGWTVREGGYPVAGPEQVLRGENEKLPGAFAINDLGVMSRIESLG
GWTSAGVESELGANALGAFSGTPYLMAEHPGGTVFYRSKVMVYRLPDEGVDEGADESV
DEGGEVAE"
misc_feature 136862..137932
/locus_tag="Caci_0132"
/note="Uncharacterized protein conserved in bacteria
(DUF2264); Region: DUF2264; pfam10022"
/db_xref="CDD:220525"
gene 138703..139476
/locus_tag="Caci_0133"
/db_xref="GeneID:8331458"
CDS 138703..139476
/locus_tag="Caci_0133"
/inference="protein motif:PFAM:PF01261"
/note="PFAM: xylose isomerase;
KEGG: sma:SAV_5310 hypothetical protein"
/codon_start=1
/transl_table=11
/product="xylose isomerase"
/protein_id="YP_003110929.1"
/db_xref="GI:256389365"
/db_xref="InterPro:IPR012307"
/db_xref="GeneID:8331458"
/translation="MSWPLAFSTLGCSGLPLADVVELARSTGWLGLELRAADDEPVHV
GLSPEERVAARALLESGGVTVLAVASYVKVARGEIGDDECVADALAHADLARDLGAPF
VRVFPGAEEPGADADARAVRRLNAIAERLPEGVAVLLETHDSHPQGVDIARVLSQVSG
DVGTIWDVMHPWRTGEPISVTKDVLAPYLRHVQVKDVLSPTERTPLPLGDGTIPLAEF
YAALRELGYQGWMSLEWESKWHPEAVPLADALKVKPDFA"
misc_feature 138703..139431
/locus_tag="Caci_0133"
/note="Sugar phosphate isomerases/epimerases [Carbohydrate
transport and metabolism]; Region: IolE; COG1082"
/db_xref="CDD:224007"
sig_peptide 138703..138759
/locus_tag="Caci_0133"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.911) with cleavage site probability 0.890 at
residue 19"
misc_feature 139363..>139410
/locus_tag="Caci_0133"
/note="AP endonuclease family 2 C terminus; Region:
AP_endonuc_2_N; pfam07582"
/db_xref="CDD:191792"
gene complement(139484..140566)
/locus_tag="Caci_0134"
/db_xref="GeneID:8331459"
CDS complement(139484..140566)
/locus_tag="Caci_0134"
/EC_number="5.1.1.1"
/inference="protein motif:PRIAM:5.1.1.1"
/note="KEGG: rsa:RSal33209_0109 LacI family transcription
regulator;
PFAM: regulatory protein LacI; periplasmic binding
protein/LacI transcriptional regulator;
SMART: regulatory protein LacI"
/codon_start=1
/transl_table=11
/product="LacI family transcriptional regulator"
/protein_id="YP_003110930.1"
/db_xref="GI:256389366"
/db_xref="InterPro:IPR000843"
/db_xref="InterPro:IPR001761"
/db_xref="GeneID:8331459"
/translation="MPRRPEADRDSTTPRAATIRDVASRAGVSVATVSRVLTGNYPVA
SATRTKVLRAVRELDYVVNAHARALAGNRSKMIAVLLSNLTSPFYNRVASGVEQQAMA
EDRLCMVSTTGGDPEREVKLVETLREQNVDAVVLVGGVVDSPEYRDHMARLARLLDSA
GSRLVICGRPSPGENLPVTVVEYDNAGGAFAATSHLLSQGHRRILFIGGDEANTTTRD
RLDGYRRAIQAYGIEADPALVIVGNQLPPFAYAELKKRLAAGPPDFTAVFAWDDHIAA
RTLVALRESGVSVPDQVSVIGYNDEQEAQDLYPALTTVSIPHMELGREAVRLALHRDE
AAAPNQHVVLGTHIVMRDSVRPLINR"
misc_feature complement(139496..140518)
/locus_tag="Caci_0134"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:224525"
misc_feature complement(140354..140509)
/locus_tag="Caci_0134"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature complement(order(140357..140362,140366..140371,
140378..140380,140387..140389,140426..140428,
140435..140440,140453..140455,140462..140467,
140471..140485,140507..140509))
/locus_tag="Caci_0134"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature complement(140360..140389)
/locus_tag="Caci_0134"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature complement(139520..140341)
/locus_tag="Caci_0134"
/note="Ligand binding domain of the LacI tanscriptional
regulator family belonging to the type I
periplasmic-binding fold protein superfamily; Region:
PBP1_LacI_sugar_binding_like; cd06267"
/db_xref="CDD:107262"
misc_feature complement(order(139715..139720,139727..139729,
139739..139741,139826..139828,140177..140185,
140192..140194,140201..140203,140234..140236,
140240..140254,140273..140278,140282..140287,
140294..140302,140339..140341))
/locus_tag="Caci_0134"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107262"
misc_feature complement(order(139619..139621,139670..139672,
139835..139837,139910..139912,140018..140020,
140063..140065,140156..140158,140291..140293,
140300..140305))
/locus_tag="Caci_0134"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107262"
gene complement(140607..143765)
/locus_tag="Caci_0135"
/db_xref="GeneID:8331460"
CDS complement(140607..143765)
/locus_tag="Caci_0135"
/inference="protein motif:PFAM:PF00196"
/note="PFAM: regulatory protein LuxR;
SMART: regulatory protein LuxR;
KEGG: sco:SCO6193 transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_003110931.1"
/db_xref="GI:256389367"
/db_xref="InterPro:IPR000792"
/db_xref="GeneID:8331460"
/translation="MIGHGELVADLTARAADAVPTVLTAPPGRGKSALLDAVAEPWIA
REDHVVWLTAAPTDRDVPFAALTDLLTEAPDLPEPWLAALKQALRRIPGTPDRVAIRL
AARACLDAAIPPDKGVLLLADDLQWWDADSLDVLAHLARHGIPVVAATRPGGPVDLLG
RDAQEVPVPALTAEQTATLLQERGIGFRIAARVHTAAGGNARLTVEIARGFDATSGAL
DAVTTPAAARRCIRGWIDELPTPDNVWRTLLIAAIAADPAIPTLRRTAGPATLEALAC
AEQAGLITVDVHGTVTFPATAVRDTVLADASQETLRTAHLLLAETTTDPTARLWHRAT
AARDRPDLEVASELAIAARAVRRRGDPGRAAELWLLAAEMMPARETMAETTDASNGSL
APLPAPVSGTADRTQHADQQPVARDASAARQHATHAQPSSGPTATTGSLSAPDASTTR
HQAATAQPADTPPQTADFPTRATRQPAATSQPISDPTPATSFFTALDASDTRQPAASS
APAGRPSTTAASTDQPPRPPASRTTPRPTAVAALLLAAATDAAAAGRPHLARTAVARL
DRTESDHAARARARLAVVDAAGQAVGGLDGILGRALADAEAAADPALLSAVHLRVAWH
AHLALGDNRRAHDAARAAVRAAELSQDAESRAAALVMLARIEQLLGESSYPRVLRRAL
ALSPEPPGALLNSPRWLSVRFALFADQLDEARHHLSQLTSHAERSGSHADRALLLRGA
VEIDARAGHGAAAIRSARRLEELPGADRASPGPVWFTAALAQTAGGTLEEALRLADRG
TAASAQEQDQIFLTRCLALSGGIRLLLRDTAAAADDLNRVRTLVAEQGIADPAAVRFH
ADLAEVLVSLGQPDEAAVIVTETRRAAEELRRRGVLASLDRADAVIKASQGDHARAEA
LLHRADHTFHTLGLPLERGRVLLTRAIIDKRRRRAASARRFHDQATAIFQRAQAPLWE
PAEVVTETPGPAHGPGQGPAPDLTAAEQRIVALVTEGLPNREIAANLFLSVKTVESVL
TGVYRKLGVRSRTQLAVLLRDD"
misc_feature complement(140613..>140786)
/locus_tag="Caci_0135"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:225107"
misc_feature complement(140613..140783)
/locus_tag="Caci_0135"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(140640..140642,140673..140687,
140691..140696,140700..140705,140727..140735,
140772..140780))
/locus_tag="Caci_0135"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(140613..140618,140625..140627,
140634..140642,140733..140735,140739..140741,
140745..140747))
/locus_tag="Caci_0135"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene 144022..145890
/locus_tag="Caci_0136"
/db_xref="GeneID:8331461"
CDS 144022..145890
/locus_tag="Caci_0136"
/inference="protein motif:PFAM:PF05345"
/note="PFAM: Ig family protein;
KEGG: sma:SAV_5630 neutral zinc metalloprotease"
/codon_start=1
/transl_table=11
/product="Ig family protein"
/protein_id="YP_003110932.1"
/db_xref="GI:256389368"
/db_xref="InterPro:IPR008009"
/db_xref="GeneID:8331461"
/translation="MKNTNTRRRAAAAGAAVATMAAGFGLLAATAQTAQAWEINPASC
KHAPHSHKHGVQPTETQTLCDRINAAGHAAPTGSETLSYGGGVDGIGVNSGKNQVYLV
FYGSQWGTQTAGSNGVSSFSGDPKGAAPAAQKMFKDIGTGGETWSADLTQWCDGPNVA
AGATSCPSNAAFVPYQSGGVLAGVWYDNSAASPAKASGHALGVEAVNAAAHFGNTTAA
SNRNAYYVILSPTGTNPDDYENPSTGYCAWHDYNGDTTLTGGAVASSYGDIAFSNQPY
NIDAGQTCGTNFVNSGSAGTLDGYTMTLGHEWHEMMSDKNPAGGWTNNTGSSYNGQEN
SDECAWLKPGTTGGAANVTLGSDTFAEQASWSNDTNGCAMSHQILTHNGGGAVTVTQP
AAQTSTVGSAVSLQIQASDSTSGQTLSYTATGLPQGVAINSASGLISGTPTTAGSSSV
TVTVKDTTGASGSATFGWTVNSTTGGGTVITNGGFENGSLSGWTTSGVTAATATGPHA
GGYAAELGNLNPSSTSTIAQTFTAGAGNSRLAFWYNVTCDDTVQYDWATATLKDNTTG
TTKTVLAKTCTNPTSGWKQVTAAVTAGDSYTLTLSNHDDNYAGDPTYTLYDDVAVS"
sig_peptide 144022..144132
/locus_tag="Caci_0136"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.596 at
residue 37"
gene complement(145960..146790)
/locus_tag="Caci_0137"
/db_xref="GeneID:8331462"
CDS complement(145960..146790)
/locus_tag="Caci_0137"
/inference="protein motif:PFAM:PF01261"
/note="PFAM: xylose isomerase;
KEGG: tfu:Tfu_1719 hypothetical protein"
/codon_start=1
/transl_table=11
/product="xylose isomerase"
/protein_id="YP_003110933.1"
/db_xref="GI:256389369"
/db_xref="InterPro:IPR012307"
/db_xref="GeneID:8331462"
/translation="MKLSLNQATVKRLTLAEAAEGCVRAGIPAIGLWRDRVQEIGIEA
AAKIVRASGLEVTSLCRGGFMTAASAADRAAALADNKQAVLEAAGVGTDVLILVVGGL
PSGSKDLPAARGAVAEGVADLVPFAAEHGVKLAIEPLHPMFCADRAVVSTLGQALDIA
EAFPAEQVGVVVDTYHVWWDPQLEASIARAGKGNRILSYQECDWVVPLPADMLLGRGH
VGDGHIDFARMRSLVTAAGWTGYAEVEIFNQEIWDADGDRTIATVRSRHEAVSAASGL
"
misc_feature complement(145993..146790)
/locus_tag="Caci_0137"
/note="Sugar phosphate isomerases/epimerases [Carbohydrate
transport and metabolism]; Region: IolE; COG1082"
/db_xref="CDD:224007"
gene complement(146787..146894)
/locus_tag="Caci_0138"
/db_xref="GeneID:8331463"
CDS complement(146787..146894)
/locus_tag="Caci_0138"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110934.1"
/db_xref="GI:256389370"
/db_xref="GeneID:8331463"
/translation="MNSLELFRLRPSASGSGIGARVRSLPVTGLAAVPA"
gene complement(147112..148188)
/locus_tag="Caci_0139"
/db_xref="GeneID:8331464"
CDS complement(147112..148188)
/locus_tag="Caci_0139"
/inference="similar to AA sequence:KEGG:SCO2751"
/note="KEGG: sco:SCO2751 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110935.1"
/db_xref="GI:256389371"
/db_xref="GeneID:8331464"
/translation="MAGFTSRVVYAAAHVVADPEADNRAGKPAVLDWDATLRFREHLW
SLGFGIADAMDTAQRGMGLDWSATQELIRRSGAAAKAVDAGNVPTLLACGAGTDQLSA
GAHSLPDIRAAYEEQLDVVEAAGARVILMASRALAASARSAEDYLTTYRALLDQAANP
VILHWLGDMFDPALAGYWGSADIPTAMATVLELINANPQKVDGIKISLLNADHELELR
RRLPAGVRLYTGDDFNYPQLIKGDTTGHSDALLGIFDGIARPAAQALQALDRGDLQTY
DRLMNPTVALSRHIFEKPTFHYKTGLVFLAYLNGHQAHFRMVGALETARDTTHLTKLL
HLAEAAGVIDDPELAAQRFAAVVA"
misc_feature complement(147115..148179)
/locus_tag="Caci_0139"
/note="Protein of unknown function (DUF993); Region:
DUF993; pfam06187"
/db_xref="CDD:114880"
gene complement(148197..149357)
/locus_tag="Caci_0140"
/db_xref="GeneID:8331465"
CDS complement(148197..149357)
/locus_tag="Caci_0140"
/inference="protein motif:PFAM:PF01408"
/note="PFAM: oxidoreductase domain protein; oxidoreductase
domain;
KEGG: sgr:SGR_4813 oxidoreductase"
/codon_start=1
/transl_table=11
/product="oxidoreductase domain-containing protein"
/protein_id="YP_003110936.1"
/db_xref="GI:256389372"
/db_xref="InterPro:IPR000683"
/db_xref="InterPro:IPR004104"
/db_xref="GeneID:8331465"
/translation="MTRETVGIAMNGVTGRMGYRQHLLRSILAIRDQGGLALPDGRTV
WPEPILVGRNAEKIEALATRHGLDKWTTSLDEALADPSVTVYFDAQVTQARVPAITRA
IEAGKHIYTEKPTAETLDDAISLARIADAAGIKHGVVQDKLFLPGLLKLKRLVDSSFF
GRILSVRGEFGYWVFEGDWQPAQRPSWNYRAEDGGGIILDMFPHWRYVLDHIIAPVRS
VYAEARTDIPTRWDEQGREYKATADDAAYALFELEGGIVASLNSSWTTRVNREELVEF
QIDGTHGSAVAGLRNCKAQHRAATPKPVWNPDIPATEDFLAQWQEVPDNAVMDNGFKV
QWEMFLAHLVADAPYSHDLWAGARGVQLAELGAQSWREGRKVAVPELDRTGK"
misc_feature complement(148218..149345)
/locus_tag="Caci_0140"
/note="Predicted dehydrogenases and related proteins
[General function prediction only]; Region: MviM; COG0673"
/db_xref="CDD:223745"
misc_feature complement(148959..149342)
/locus_tag="Caci_0140"
/note="Oxidoreductase family, NAD-binding Rossmann fold;
Region: GFO_IDH_MocA; pfam01408"
/db_xref="CDD:201778"
gene 149451..150509
/locus_tag="Caci_0141"
/db_xref="GeneID:8331466"
CDS 149451..150509
/locus_tag="Caci_0141"
/inference="protein motif:PFAM:PF00532"
/note="PFAM: periplasmic binding protein/LacI
transcriptional regulator; regulatory protein LacI;
SMART: regulatory protein LacI;
KEGG: tfu:Tfu_1710 LacI family transcription regulator"
/codon_start=1
/transl_table=11
/product="LacI family transcriptional regulator"
/protein_id="YP_003110937.1"
/db_xref="GI:256389373"
/db_xref="InterPro:IPR000843"
/db_xref="InterPro:IPR001761"
/db_xref="GeneID:8331466"
/translation="MSTQRSTPSPAPRRGGATLQQVADAAGVSLATASRVLNGSTRTV
NPELSEHVREVATRLRYVSHGPAQALARATTSLVGLLVHDVNDPYFSAVAAGAMRVAR
ERDLLVMVANTYRDPELELDYITRLGAQRARAILVAGSPPVDPALAKPLRERLLDYQQ
GGGRVVSIGDQGPDIDAVLPANVEGARAAALHLTALGHREIGMVAGPRGLVTIADRSE
GFRSGLMDSDGDPVGHEIEGAFTRDGGYDATQRLLAAHPDVTAVFVMADVMAIGALAA
LRDAGRRVPDDVSLVGFDDLPICADLMPALTTVRVDTEGMGEQAMRMVVSEVQDEGRA
VVHSATELIVRGSTGPAA"
misc_feature 149499..150500
/locus_tag="Caci_0141"
/note="Transcriptional regulators [Transcription]; Region:
PurR; COG1609"
/db_xref="CDD:224525"
misc_feature 149508..149666
/locus_tag="Caci_0141"
/note="Helix-turn-helix (HTH) DNA binding domain of the
LacI family of transcriptional regulators; Region:
HTH_LacI; cd01392"
/db_xref="CDD:143331"
misc_feature order(149508..149510,149532..149546,149550..149555,
149562..149564,149580..149585,149592..149594,
149631..149633,149640..149642,149649..149654,
149658..149663)
/locus_tag="Caci_0141"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature 149631..149660
/locus_tag="Caci_0141"
/note="domain linker motif; other site"
/db_xref="CDD:143331"
misc_feature 149679..150479
/locus_tag="Caci_0141"
/note="Ligand binding domain of the LacI tanscriptional
regulator family belonging to the type I
periplasmic-binding fold protein superfamily; Region:
PBP1_LacI_sugar_binding_like; cd06267"
/db_xref="CDD:107262"
misc_feature order(149679..149681,149718..149726,149733..149738,
149742..149747,149766..149780,149784..149786,
149817..149819,149826..149828,149835..149843,
150177..150179,150261..150263,150273..150275,
150282..150287)
/locus_tag="Caci_0141"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107262"
misc_feature order(149715..149720,149727..149729,149862..149864,
149955..149957,149988..149990,150096..150098,
150168..150170,150330..150332,150381..150383)
/locus_tag="Caci_0141"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107262"
gene 150596..151456
/locus_tag="Caci_0142"
/db_xref="GeneID:8331467"
CDS 150596..151456
/locus_tag="Caci_0142"
/inference="protein motif:PFAM:PF00892"
/note="PFAM: protein of unknown function DUF6
transmembrane;
KEGG: sgr:SGR_4335 integral membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110938.1"
/db_xref="GI:256389374"
/db_xref="InterPro:IPR000620"
/db_xref="InterPro:IPR001865"
/db_xref="GeneID:8331467"
/translation="MPVVLSAAFLHASWNAILKFVSDKLTASLLMTVSSGVLAAIGVF
LLPAPDRASWVLLLVSAALHVGYFLMLIKTFEIGDFNQVYPLARGLSPVVVAFFATAL
GDPMSRHQTVGIAVVCGGLTTLVFSAGRPKRAQGKALFWAAMTGLSIATYTVTDGVAV
RHSKTAAGYTAWMMLAESTLMTAACVAIMTRRGRVSTAAGLLPTLRKLSRGDVLRGVI
AGALSLFAYGLVLWAQTRGALAAVSALRETSVIFGAALGSVFLREPFGRYRIFAAVAI
AGGILILEAA"
sig_peptide 150596..150715
/locus_tag="Caci_0142"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.871) with cleavage site probability 0.860 at
residue 40"
misc_feature 150605..151402
/locus_tag="Caci_0142"
/note="phosphonate utilization associated putative
membrane protein; Region: phn_DUF6; TIGR03340"
/db_xref="CDD:234171"
gene complement(151637..152257)
/locus_tag="Caci_0143"
/db_xref="GeneID:8331468"
CDS complement(151637..152257)
/locus_tag="Caci_0143"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver;
SMART: response regulator receiver;
KEGG: sco:SCO5749 two-component regulator"
/codon_start=1
/transl_table=11
/product="response regulator receiver protein"
/protein_id="YP_003110939.1"
/db_xref="GI:256389375"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:8331468"
/translation="MNDAHRASAPSDGDIKILLVDDRPENLLALESILGSLGHELVTA
ASGEQALRAVLREEFAVILLDVRMPGMDGFEVAAHIRLRERSRDTPIIFLTAAGDGPH
QTLRGYAAGAADYLTKPFDPWVLRAKVGVFAELHRKNRQLKEQAEMLRETAGVTPRML
DELSNRLGAIEGTLALLIDQSGREGPVGRLERRVVRMRAALDAVRV"
misc_feature complement(151871..152209)
/locus_tag="Caci_0143"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(151871..152206)
/locus_tag="Caci_0143"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature complement(order(151901..151906,151913..151915,
151973..151975,152039..152041,152063..152065,
152192..152197))
/locus_tag="Caci_0143"
/note="active site"
/db_xref="CDD:238088"
misc_feature complement(152063..152065)
/locus_tag="Caci_0143"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature complement(order(152039..152047,152051..152056))
/locus_tag="Caci_0143"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature complement(151898..151906)
/locus_tag="Caci_0143"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
gene complement(152254..155613)
/locus_tag="Caci_0144"
/db_xref="GeneID:8331469"
CDS complement(152254..155613)
/locus_tag="Caci_0144"
/EC_number="2.7.13.3"
/inference="protein motif:PRIAM:2.7.13.3"
/note="KEGG: sgr:SGR_1773 two-component system sensor
kinase;
PFAM: ATP-binding region ATPase domain protein; response
regulator receiver; GAF domain protein; histidine kinase A
domain protein; histidine kinase HAMP region domain
protein;
SMART: ATP-binding region ATPase domain protein; response
regulator receiver; histidine kinase A domain protein; GAF
domain protein; histidine kinase HAMP region domain
protein"
/codon_start=1
/transl_table=11
/product="GAF sensor hybrid histidine kinase"
/protein_id="YP_003110940.1"
/db_xref="GI:256389376"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR002129"
/db_xref="InterPro:IPR003018"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:8331469"
/translation="MTLQSDARTDPELDRQLGAILEVAQAVARGDLSRKIALSGDIVD
GPVAELARTIDAMVGQLSGFASEVIRVARELGTEGRLGGQATVEHAEGIWRDITDSVN
SAARNLTAQVRDIAGVTTAVAQGDLTQKITVEVAGEMLELKDTINTMVDQLSGFADEV
TRVSLEVGTEGRLGGQARVPGVAGTWKDLTDSVNSMADNLTTQVRNIAQVATAVASGD
LTQSITVDARGEILELKTTLNKMVDRLGTFADEVTRVAREVGTEGKLGGQATVRGVAG
TWKDLTDNVNAMANNLTSQVRNIAQVTTAVANGDLSKRIDVEARGEILELKTTLNTMV
DRLSAFASEVTRVAREVGTEGKLGGQATVEDVSGTWQRLTESVNELASNLTTQVRAIA
EVATAVTAGDLTRLITVEAKGEVADLKNNINQMIGNLRETTRRNDQQDWLNTNLARMS
GLMQGQRDLDAISALIMSELTPLVNAQYGAFYLARKESGTKVLNLIASYGVDRESPDV
TSRFRLGQGMVGQAAVERKPIMIQHAPVDYIRISSGLGSAPPSSVAVLPVLFENEVMA
VIELASFHSFDEVHRALMESLMEMVGVTVNTITANTRTEELLGESRRLADELKARTDE
LQMQQKELRRSNAELEEKAELLARQNQDIEVKNSEIEQARQELEERANQLTMSSRYKS
EFLANMSHELRTPLNSLLILARLMSDNAEGNLTERQVEYAETIHGAGSDLLQLINDIL
DLSKIEAGRMDVQPARIAVSQLVDYVEATFRPQTEQKGLELRVRVAPSVPAHLFTDEQ
RLQQVLRNLLSNSVKFTETGHVELVVDTVGDVVLGGPEDSNEVTLEPAVSFAVSDTGI
GIVDDKIQTVFEAFQQEDGTTSRRYGGTGLGLSISREIAKLLGGGIRAESQRGRGSTF
TLFLPHAVGPDGAAVFGSTGSLGYGTSPGPTGAIAEPAPTLPMIPEQAPHPDLYLPST
DLHAAGSDITFDGEKILIVDDDIRNVFALTSVLEQHGCAVLNAENGRAGLEALERADD
VALVLMDVMMPEMDGYATMAAIREIDRYKNLPIIALTAKAMRGDREKSIEAGASDYVT
KPVDTPHLLTVMRGWLDAETGAQPAPGGPAQ"
misc_feature complement(154306..155301)
/locus_tag="Caci_0144"
/note="Methyl-accepting chemotaxis protein [Cell motility
and secretion / Signal transduction mechanisms]; Region:
Tar; COG0840"
/db_xref="CDD:223910"
misc_feature complement(155155..155292)
/locus_tag="Caci_0144"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(155155..155160,155167..155172,
155176..155181,155188..155193,155197..155202,
155248..155250,155254..155259,155266..155271,
155275..155280,155287..155292))
/locus_tag="Caci_0144"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(154879..155016)
/locus_tag="Caci_0144"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(154879..154884,154891..154896,
154900..154905,154912..154917,154921..154926,
154972..154974,154978..154983,154990..154995,
154999..155004,155011..155016))
/locus_tag="Caci_0144"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(154597..154740)
/locus_tag="Caci_0144"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(154603..154608,154615..154620,
154624..154629,154636..154641,154645..154650,
154696..154698,154702..154707,154714..154719,
154723..154728,154735..154740))
/locus_tag="Caci_0144"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(154321..154464)
/locus_tag="Caci_0144"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(154327..154332,154339..154344,
154348..154353,154360..154365,154369..154374,
154420..154422,154426..154431,154438..154443,
154447..154452,154459..154464))
/locus_tag="Caci_0144"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(153826..154248)
/locus_tag="Caci_0144"
/note="GAF domain; Region: GAF_2; pfam13185"
/db_xref="CDD:221964"
misc_feature complement(153829..154242)
/locus_tag="Caci_0144"
/note="GAF domain; Region: GAF; pfam01590"
/db_xref="CDD:216590"
misc_feature complement(<153562..>153876)
/locus_tag="Caci_0144"
/note="The Bin/Amphiphysin/Rvs (BAR) domain, a
dimerization module that binds membranes and detects
membrane curvature; Region: BAR; cl12013"
/db_xref="CDD:245835"
misc_feature complement(<153427..153573)
/locus_tag="Caci_0144"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(153430..153432,153439..153441,
153451..153453,153508..153510,153517..153519,
153529..153531,153538..153540,153550..153552,
153562..153564))
/locus_tag="Caci_0144"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(153544..153546)
/locus_tag="Caci_0144"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(152860..153216)
/locus_tag="Caci_0144"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature complement(order(152872..152874,152878..152883,
152896..152898,152902..152904,152950..152961,
153040..153045,153049..153051,153055..153057,
153061..153063,153175..153177,153184..153186,
153196..153198))
/locus_tag="Caci_0144"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(153184..153186)
/locus_tag="Caci_0144"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(order(152953..152955,152959..152961,
153043..153045,153049..153051))
/locus_tag="Caci_0144"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
misc_feature complement(152293..152673)
/locus_tag="Caci_0144"
/note="FOG: CheY-like receiver [Signal transduction
mechanisms]; Region: CheY; COG0784"
/db_xref="CDD:223855"
misc_feature complement(152302..152649)
/locus_tag="Caci_0144"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature complement(order(152344..152349,152356..152358,
152413..152415,152479..152481,152503..152505,
152635..152640))
/locus_tag="Caci_0144"
/note="active site"
/db_xref="CDD:238088"
misc_feature complement(152503..152505)
/locus_tag="Caci_0144"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature complement(order(152479..152487,152491..152496))
/locus_tag="Caci_0144"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature complement(152341..152349)
/locus_tag="Caci_0144"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
gene 155821..157098
/locus_tag="Caci_0145"
/db_xref="GeneID:8331470"
CDS 155821..157098
/locus_tag="Caci_0145"
/inference="protein motif:PFAM:PF07228"
/note="PFAM: stage II sporulation E family protein;
SMART: protein phosphatase 2C domain protein;
KEGG: sgr:SGR_1774 hypothetical protein"
/codon_start=1
/transl_table=11
/product="protein serine/threonine phosphatase"
/protein_id="YP_003110941.1"
/db_xref="GI:256389377"
/db_xref="InterPro:IPR001932"
/db_xref="InterPro:IPR010822"
/db_xref="GeneID:8331470"
/translation="MAPRTPRTPLPRDRPEEAVRLTLLSQAGELLAGTLDRRRLAALA
SQLIVPRLADWVALYPPAADHSIVSSSWSPEHLWHREERKLDALAAALADWHPPTGED
GHVPGSGSGRWPVQVASPYGQALPIPLAARGVSLGTLVLGGPGKGGFAGATLPLLMEL
AGRISGALDNARQYAEQVEIVRGLQRSLLPPSLPTVDGLDIGVVYEAASNSDGVHVGG
DFYDVFPISRKVWGFAVGDVCGTGPEAAALTGLARHSLRLLAREGRSPVTVVERLNQA
VLEEGELAGDAGRFITLLYGEVEPRPDGSAQLVLVCAGHPLPLVLRQDGSVRAAANPQ
PLLGVLPDPTLYAEDVELGAGEVLLVYTDGASERRNGRQMLGDEGVAAALAGCSGMTA
PGVVARVRQAVADFGSSGTRDDLALLALRAYKG"
misc_feature 156511..157044
/locus_tag="Caci_0145"
/note="Stage II sporulation protein E (SpoIIE); Region:
SpoIIE; pfam07228"
/db_xref="CDD:219343"
gene complement(157217..158200)
/locus_tag="Caci_0146"
/db_xref="GeneID:8331471"
CDS complement(157217..158200)
/locus_tag="Caci_0146"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110942.1"
/db_xref="GI:256389378"
/db_xref="GeneID:8331471"
/translation="MTELDTREDDWARGVFDRARTGRHEPHWAPDAAGAARLSKRRQT
RYRATGALAVMAVAGLSATAFTALGGNVFHARDTVSPGSSGPILWPGLDLTKYLDVHE
SYMVAAGHQYEANRMPAVSLATTSTVLQRLDPGLKHVRTVSGHQDLDITPTPPGVTTM
AVQADGIWSPNGDLSTFPPASSNFSPVTTPFGYVSIATMGPHVAQDANMENKPCGLGT
LVTSTRIPAPTAWSPCVRSHQSDGSDILVTHAVNLPAGAVTVAARVFPDTSTVQVTAS
SVFGLQEGPAAGSSTPATPAKFDAGPPLNPVPWTDDSLAQVLTGPDVKGLP"
gene complement(158225..158737)
/locus_tag="Caci_0147"
/db_xref="GeneID:8331472"
CDS complement(158225..158737)
/locus_tag="Caci_0147"
/inference="protein motif:TFAM:TIGR02983"
/note="TIGRFAM: RNA polymerase sigma-70 factor, sigma-E
family; RNA polymerase sigma factor, sigma-70 family;
PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain
protein; sigma-70 region 4 domain protein;
KEGG: sen:SACE_7161 RNA polymerase ECF sigma factor"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-24 subunit"
/protein_id="YP_003110943.1"
/db_xref="GI:256389379"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="InterPro:IPR014325"
/db_xref="GeneID:8331472"
/translation="MDKSYEAEFAELVAAKGAALRRTAYLMCADWHLAEDLVQTVFVK
VHLHWRRIKRQETFDAYLRTTLFRAYLDTRRAKWRRETPAEYLPELEAPGTEPGDDRD
VLVAALRRIPPRQRAVLVLRYWEDLSVEETARLLGCAAGTVKSQAARGLAALRPLLAG
TPFESVTAEH"
misc_feature complement(158300..158719)
/locus_tag="Caci_0147"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:234065"
misc_feature complement(158498..158704)
/locus_tag="Caci_0147"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:218138"
misc_feature complement(158303..158437)
/locus_tag="Caci_0147"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(158303..158308,158312..158317,
158321..158323,158351..158356,158372..158374,
158402..158404))
/locus_tag="Caci_0147"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene complement(158807..160081)
/locus_tag="Caci_0148"
/db_xref="GeneID:8331473"
CDS complement(158807..160081)
/locus_tag="Caci_0148"
/EC_number="2.1.1.79"
/inference="protein motif:PRIAM:2.1.1.79"
/note="PFAM: cyclopropane-fatty-acyl-phospholipid
synthase; methyltransferase type 11; methyltransferase
type 12;
KEGG: nca:Noca_4538 cyclopropane-fatty-acyl- phospholipid
synthase"
/codon_start=1
/transl_table=11
/product="cyclopropane-fatty-acyl-phospholipid synthase"
/protein_id="YP_003110944.1"
/db_xref="GI:256389380"
/db_xref="InterPro:IPR003333"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:8331473"
/translation="MTHPAPTPLIDTDRWPDLARVPDRPVRARIARRLFTHALKDVPV
TVVAPNGLALAGAGVPGGGGPVLRVRRPKEFLNRLGSDGLIGFGEAYQTGAWDTETGD
ELVALLTELASRLEDLVPKPLQRMRSLAAHHMPRDQDGDRHGARHNAHAHYDLSNDMF
EAFLDPSMTYSAALFDPVADADGPGDLHAAQLRKIDAMLDAAGVRKGTRLLEIGSGWG
GLAIKAAGERGATVLTVTLSEEQQELARRRIAAAGLAGRIEVRLADYREVAEEQPFDA
VVSVEMIEAVGRRYLPDYFQAIERNLARGGRVAVQAITMAHHRMLATQDSYSWIHKYV
FPGGLIPSIPELDFAAETAGLRLAARRDFGLDYARTLRAWRHRFEENWPKVAGHGFDE
VFRRTWRFYLAYCEAGFASGYLGVSQLTYTRP"
misc_feature complement(158813..159658)
/locus_tag="Caci_0148"
/note="Cyclopropane fatty acid synthase and related
methyltransferases [Cell envelope biogenesis, outer
membrane]; Region: Cfa; COG2230"
/db_xref="CDD:225139"
misc_feature complement(159149..159457)
/locus_tag="Caci_0148"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(159242..159244,159287..159295,
159371..159376,159425..159445))
/locus_tag="Caci_0148"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(160146..160928)
/locus_tag="Caci_0149"
/db_xref="GeneID:8331474"
CDS complement(160146..160928)
/locus_tag="Caci_0149"
/inference="similar to AA sequence:KEGG:SGR_2642"
/note="KEGG: sgr:SGR_2642 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110945.1"
/db_xref="GI:256389381"
/db_xref="InterPro:IPR002016"
/db_xref="GeneID:8331474"
/translation="MSREEIHPASEPRLDPPVHPVRGGVVGVVLLAHGGKETSHEAPH
RRGGPVTRMRMIARAVAPRLAGRGVAVHTMCFRYQGWNGAERAPVPDVWWAAARLTER
YGEVPLVLAGHSLGGRAVVNAADAPGVVGVLGLAPWLPAQEPTGQLAGRRLLLAHGTR
DRVTSPRSSYEYAARARAEGHDVARIVLPGSGHTMLSRARDWNRLVLAFSHTCLLEQH
VVAADANRTRPPRYADVIAEAFQAAAPEGLQRVLTPAGRVRS"
misc_feature complement(160350..160841)
/locus_tag="Caci_0149"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_5;
pfam12695"
/db_xref="CDD:221718"
gene complement(160949..161347)
/locus_tag="Caci_0150"
/db_xref="GeneID:8331475"
CDS complement(160949..161347)
/locus_tag="Caci_0150"
/inference="protein motif:PFAM:PF03681"
/note="PFAM: protein of unknown function UPF0150;
KEGG: blj:BLD_1980 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110946.1"
/db_xref="GI:256389382"
/db_xref="InterPro:IPR005357"
/db_xref="GeneID:8331475"
/translation="MTGPATPETYRAIAELDGEWWVVTVPDLRGVYTQGRTYEQARAM
ARDAIATMLDTAPDRVAVAMEVRLPGHAEDTISEVARARAARDEAAAAEQRKLRESAR
RLKAAGVKVVDAAVLLGVSKQRVYQLLTDH"
misc_feature complement(161189..161323)
/locus_tag="Caci_0150"
/note="Uncharacterized protein family (UPF0150); Region:
UPF0150; pfam03681"
/db_xref="CDD:217670"
gene complement(161344..161532)
/locus_tag="Caci_0151"
/db_xref="GeneID:8331476"
CDS complement(161344..161532)
/locus_tag="Caci_0151"
/inference="protein motif:PFAM:PF07927"
/note="PFAM: YcfA family protein;
KEGG: mar:MAE_55720 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110947.1"
/db_xref="GI:256389383"
/db_xref="InterPro:IPR012933"
/db_xref="GeneID:8331476"
/translation="MKRRDLLKALSDIAAEASVDFELVRHGGSHDIYRVGALHLTIPR
HTEISELLAKKILKEASQ"
misc_feature complement(161353..161526)
/locus_tag="Caci_0151"
/note="YcfA-like protein; Region: YcfA; pfam07927"
/db_xref="CDD:219647"
gene complement(161660..162997)
/locus_tag="Caci_0152"
/db_xref="GeneID:8331477"
CDS complement(161660..162997)
/locus_tag="Caci_0152"
/inference="protein motif:PFAM:PF00070"
/note="PFAM: FAD-dependent pyridine nucleotide-disulphide
oxidoreductase;
KEGG: fal:FRAAL6227 NADH dehydrogenase"
/codon_start=1
/transl_table=11
/product="FAD-dependent pyridine nucleotide-disulfide
oxidoreductase"
/protein_id="YP_003110948.1"
/db_xref="GI:256389384"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR013027"
/db_xref="GeneID:8331477"
/translation="MGKASGNGKAIPRILIVGGGYVGMYTAHRILKKLGKDEALVTVV
DPRSYMTYQPFLPEAAAGSLSPRHVVVPLRSVLKRAEVLTARVTDIDQNRKVATIEPI
AGEPYELEFDQLVIAVGSIARTLPIPGLAENGIGFKQIEEAIALRNHVLGQMDIAATT
KDEKIRRRALTFVFIGGGFAGIEAIAELEDMARDACKIYPNIRPEDMRWVMVEGSGRI
LPEVRPALGEYTVHELEKRGIQVKLNTFLESCVNRRVQLSDGTKMVASTIVWTAGVKP
NPVVQRFGVPLGERGHVKAGATLQVEGFADVWSAGDGAQVPDLANPGKWCSPSAQHAV
RQAKQLADNVVAAVRGFEPREYKHKHVGSVASLGLHKGVADVYNIRLRGWPAWFMHRT
YHMSRVPTFNRKIRVIADWTLALFFRREAVGLGSIERPRDEFAEAAGEQRKAA"
misc_feature complement(161741..162964)
/locus_tag="Caci_0152"
/note="NADH dehydrogenase, FAD-containing subunit [Energy
production and conversion]; Region: Ndh; COG1252"
/db_xref="CDD:224172"
misc_feature complement(<162848..162961)
/locus_tag="Caci_0152"
/note="Pyridine nucleotide-disulphide oxidoreductase;
Region: Pyr_redox; pfam00070"
/db_xref="CDD:215691"
gene complement(163334..164290)
/locus_tag="Caci_0153"
/db_xref="GeneID:8331478"
CDS complement(163334..164290)
/locus_tag="Caci_0153"
/inference="protein motif:PFAM:PF02541"
/note="PFAM: Ppx/GppA phosphatase;
KEGG: sma:SAV_3530 exopolyphosphatase"
/codon_start=1
/transl_table=11
/product="Ppx/GppA phosphatase"
/protein_id="YP_003110949.1"
/db_xref="GI:256389385"
/db_xref="InterPro:IPR003695"
/db_xref="GeneID:8331478"
/translation="MTKRVAAIDCGTNSIRLLIADVHPRTGRTEDVVREMRIVRLGEG
VDATGRLAPAALERTFAACLEYQDLIERHSGGTPIPLRFVATSATRDAENRREFVEGV
KGILGVEPYVATGDEEARFSFTGATSELPHDRHQAPYLVIDIGGGSTEFVLGDAERGV
IAARSVDMGCVRMYERHLKTAGVATEAQVKAARADIEKLIDRAAEAVPLDEARTLVGL
AGTVTTLGAVALDLDEYDSERIHLSHIPLGRVRDITTRLLGLTPDERKAIPVIHPGRA
DVIGAGALVLLAIMERVAPSLAAPEVVVSERDILDGIAASIA"
misc_feature complement(163352..164281)
/locus_tag="Caci_0153"
/note="exopolyphosphatase; Region: exo_poly_only;
TIGR03706"
/db_xref="CDD:234320"
misc_feature complement(163418..164200)
/locus_tag="Caci_0153"
/note="Ppx/GppA phosphatase family; Region: Ppx-GppA;
pfam02541"
/db_xref="CDD:202276"
gene complement(164306..164869)
/locus_tag="Caci_0154"
/db_xref="GeneID:8331479"
CDS complement(164306..164869)
/locus_tag="Caci_0154"
/inference="protein motif:PFAM:PF04417"
/note="PFAM: protein of unknown function DUF501;
KEGG: sco:SCO3094 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110950.1"
/db_xref="GI:256389386"
/db_xref="InterPro:IPR007511"
/db_xref="GeneID:8331479"
/translation="MTNDAPTPDTSRPAPAAAPEADAVSQADLAAVEAQLSRTPRGVR
RVAHRCPCGNPDVVETAPRLPDGTPFPTLFYLTCPKAASAIGTLEASGLMKEMTERLK
TDPELAAAYRAADEEYRARRDAIEVLDGFPTAGGMPDRVKCLHVLVGHTLAAGPGVNP
LGDEALALLPEWWKSGPCVTPSEEPGA"
misc_feature complement(164363..164800)
/locus_tag="Caci_0154"
/note="Protein of unknown function (DUF501); Region:
DUF501; cl00652"
/db_xref="CDD:242005"
gene 165051..165470
/locus_tag="Caci_0155"
/db_xref="GeneID:8331480"
CDS 165051..165470
/locus_tag="Caci_0155"
/inference="similar to AA sequence:KEGG:SACE_1821"
/note="KEGG: sen:SACE_1821 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110951.1"
/db_xref="GI:256389387"
/db_xref="GeneID:8331480"
/translation="MLPALRVVAVLHALSFIVQPVLAGLFLSGQDTAVDMHATNGMIV
VTLCLVMTILALPVWRRGLLPRAAFTTSAALLVVEVIQMMVGFTHIMWLHIPLGVLMM
GGVAQLMPLVMRPYRPSAERTAAAGAVVAFPAVEAGE"
gene 165467..167053
/locus_tag="Caci_0156"
/db_xref="GeneID:8331481"
CDS 165467..167053
/locus_tag="Caci_0156"
/EC_number="1.3.3.5"
/inference="protein motif:PRIAM:1.3.3.5"
/note="PFAM: multicopper oxidase type 2; multicopper
oxidase type 3; multicopper oxidase type 1;
KEGG: sen:SACE_1822 spore coat protein (outer)"
/codon_start=1
/transl_table=11
/product="bilirubin oxidase"
/protein_id="YP_003110952.1"
/db_xref="GI:256389388"
/db_xref="InterPro:IPR001117"
/db_xref="InterPro:IPR002355"
/db_xref="InterPro:IPR006311"
/db_xref="InterPro:IPR011706"
/db_xref="InterPro:IPR011707"
/db_xref="GeneID:8331481"
/translation="MSGPRLSRRGALRLFGGAGAVAVLSPTLAGCAKPGNDGINPGTL
SSKAKLPKPFSIPLPILKPLAPDSTDAQGVHYSMTLKQAEVEILPGYRTKIFGYNGTF
PGPYLDVHAGTPMVVHQTNQLPVPIVTHLHGGLTPPSDDGFPTDLVFPQALADMADPG
MAASMAGMDGMPSMKDPLAHLTAVQRDYVFPLNQRASTLWYHDHRMDFSGVQVWRGLF
GLCVLRDAEDDKLPLPKGEREIPLMIADRAFDADGQLIYPEKDPTLLGKPSMDKSIAA
GAQGDVILVNGAPWPYLEVAAVKYRLRLLNASNARRYELKLDGPGGGEFVQVGSDGGL
LAAPLTHSTLHMSPAERFDVVVDFSKYPVGSTVTLKNSAASGGPGQVMQFKVTSHAAD
DSSVPATLSTIEKLTVNGAKRRLVFALDGDQWHVNGKAFDPAHPLVKPEFGKTEQWTV
TSVERHPVHLHGAHFQVTGRGSGGLGEYDHGWKDTVELSPGSEITLAVRFDSYRGRYV
AHCHNLEHEDMGMMATIQVV"
sig_peptide 165467..165565
/locus_tag="Caci_0156"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.914) with cleavage site probability 0.640 at
residue 33"
misc_feature 165626..167050
/locus_tag="Caci_0156"
/note="Putative multicopper oxidases [Secondary
metabolites biosynthesis, transport, and catabolism];
Region: SufI; COG2132"
/db_xref="CDD:225043"
misc_feature 165710..166150
/locus_tag="Caci_0156"
/note="Multicopper oxidase; Region: Cu-oxidase_3;
pfam07732"
/db_xref="CDD:219542"
misc_feature <166787..167047
/locus_tag="Caci_0156"
/note="Multicopper oxidase; Region: Cu-oxidase_2;
pfam07731"
/db_xref="CDD:219541"
gene complement(167197..168402)
/locus_tag="Caci_0157"
/db_xref="GeneID:8331482"
CDS complement(167197..168402)
/locus_tag="Caci_0157"
/inference="protein motif:PFAM:PF01590"
/note="PFAM: GAF domain protein; histidine kinase
dimerisation and phosphoacceptor region;
SMART: GAF domain protein;
KEGG: sma:SAV_4257 two-component system sensor kinase"
/codon_start=1
/transl_table=11
/product="phytochrome sensor protein"
/protein_id="YP_003110953.1"
/db_xref="GI:256389389"
/db_xref="InterPro:IPR003018"
/db_xref="InterPro:IPR011712"
/db_xref="GeneID:8331482"
/translation="MSESRESPEIADLREALAASRRRESWLSAAADVITLMLIAVDPH
EVLTLVAERAREASGADHCSLLLQHVDGSWRIDVATGLAADQVRGAFVEPHRRSVQVA
VTGRALALEAGDVDPEELAPPFRRFGAIVYAALAQRDDRPIGTLVLANAPGGRTFDEE
DARLATAFAHQAGLALALTEARAAEDRLAVYADRERIARDLHDLTIQRIFAAGLSLQT
LSRRLNSPGPDLPAAAGRLDGVIDELDAAIAEIRTTIFDLQLTADQEATSTRARVLRE
ASRAARVLGFEPSVRFTGPLDSLVGGDTGAHLVAAVRETLANAAKHAGATRVEVVVTV
ETGPATTLTLDVLDDGGAPMPRWRPNPRTARQGLSNLAARARELGGSFHAGPADGDRG
TRVSWRVPL"
misc_feature complement(167890..168309)
/locus_tag="Caci_0157"
/note="FOG: GAF domain [Signal transduction mechanisms];
Region: FhlA; COG2203"
/db_xref="CDD:225113"
misc_feature complement(167890..168279)
/locus_tag="Caci_0157"
/note="Domain present in phytochromes and cGMP-specific
phosphodiesterases; Region: GAF; smart00065"
/db_xref="CDD:214500"
misc_feature complement(167200..>167829)
/locus_tag="Caci_0157"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG4585"
/db_xref="CDD:226951"
misc_feature complement(167626..167826)
/locus_tag="Caci_0157"
/note="Histidine kinase; Region: HisKA_3; pfam07730"
/db_xref="CDD:219540"
gene complement(168565..169635)
/locus_tag="Caci_0158"
/db_xref="GeneID:8331483"
CDS complement(168565..169635)
/locus_tag="Caci_0158"
/inference="protein motif:TFAM:TIGR01141"
/note="TIGRFAM: histidinol-phosphate aminotransferase;
PFAM: aminotransferase class I and II;
KEGG: sma:SAV_4261 aminotransferase"
/codon_start=1
/transl_table=11
/product="aminotransferase"
/protein_id="YP_003110954.1"
/db_xref="GI:256389390"
/db_xref="InterPro:IPR001176"
/db_xref="InterPro:IPR001917"
/db_xref="InterPro:IPR004839"
/db_xref="InterPro:IPR005861"
/db_xref="GeneID:8331483"
/translation="MADDVQTPKLREALRGIPAYKAGKNPDASAFKLSSNENPYPPLP
GVLEAVQKSAENFNRYPDMGCSALSSEIAERFGVPVEHVATGTGSVGVAQQLLQATSG
PGDEVIYAWRSFEAYPIITQISGATSVRVPLTPEEHHDLDAMAAAVTDRTRLIFVCNP
NNPTGVAISEDALVRFLDRVPSDVLVVIDEAYREFVRDDSIPDGVDLYRDRPNVAVLR
TFSKAYGLAGLRVGFAIAHEPVAAALRQTAVPFGVNSLAQVAAIESLRAEKLLLERCE
ALVQERTRVTEALREQGWTVPESQANFIWLRLGERTAEFAAKAEAAGIVVRPFAGEGA
RITVGEVEANDILLRVTAEFQE"
misc_feature complement(168574..169614)
/locus_tag="Caci_0158"
/note="histidinol-phosphate aminotransferase; Validated;
Region: PRK02731"
/db_xref="CDD:235064"
misc_feature complement(168577..169542)
/locus_tag="Caci_0158"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature complement(order(168946..168948,168970..168975,
168979..168981,169060..169062,169150..169152,
169294..169296,169366..169374))
/locus_tag="Caci_0158"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature complement(order(168856..168858,168865..168867,
168946..168954,169081..169083,169264..169266,
169363..169365))
/locus_tag="Caci_0158"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature complement(168970..168972)
/locus_tag="Caci_0158"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene 169720..170865
/locus_tag="Caci_0159"
/db_xref="GeneID:8331484"
CDS 169720..170865
/locus_tag="Caci_0159"
/inference="similar to AA sequence:KEGG:SACE_5011"
/note="KEGG: sen:SACE_5011 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110955.1"
/db_xref="GI:256389391"
/db_xref="GeneID:8331484"
/translation="MTLNGFAYGELSFGADGQPADPTQRGAAPAVALGADVTDLLVLS
HGWLDDPPRAQILYAGLTEAIVQAGGAPPGLAVLGILWPSKRFDAEPEVQVAATVAAT
DPSGRAAESFVTRVRHRVGAQLELLPVTAEYANPGDHQATFFGLEPRALLEKFGSIED
GIDAVLNLSTYYEMKGRAGAVGKGLVPVLAAVREARPEVRLHLAGHSFGARVMASALA
NCEAFPVSSVTLIQGAFSQFGFAKQWDGVHDGLFRPGLFGGRLKGPVVVTHSRHDHMV
GLAYELASRMAGDQPDTTGMAGHVHVHDEYGAIGSHGALSTPESVWGTMLPVQGAGYA
FPAGAISNLDGNAYIPNHYHVMTPEMGKVLVAAMTACEAEYGVAEAS"
gene 170983..171954
/locus_tag="Caci_0160"
/db_xref="GeneID:8331485"
CDS 170983..171954
/locus_tag="Caci_0160"
/inference="protein motif:PFAM:PF01965"
/note="PFAM: ThiJ/PfpI domain protein; helix-turn-helix-
domain containing protein AraC type;
SMART: helix-turn-helix- domain containing protein AraC
type;
KEGG: bmj:BMULJ_02621 AraC subfamily transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_003110956.1"
/db_xref="GI:256389392"
/db_xref="InterPro:IPR000005"
/db_xref="InterPro:IPR002818"
/db_xref="GeneID:8331485"
/translation="MSRRVVFLVFPRFQLLDLTGPLEVFSQADMLFSPGRQRYVTEVV
ALGAEPVTASDGLAVVPHRTLADAAELPIDTLVVVGGRGVRTAMTDPVYVEWVRAAAG
RARRVTSVCSGTFLLAAAGLLDGRRAVTHWDSCEELAERFPEIRVEADPIFVRDDPLW
TSAGVTAGVDLALALVEDDLGAEVARRIAKQLVVFVQRPGGQAQFSTQLAAQRPGRDA
LRETQTWIADHLDDNLSLAALARRAALSERHFSRVFRAETGMTVAAYVEAARIEAAQR
LLESTRDGLDRIARTCGFGTVETMHRTFNRTIRVTPGEYRRHFSSPR"
misc_feature 170983..171951
/locus_tag="Caci_0160"
/note="Transcriptional regulator containing an amidase
domain and an AraC-type DNA-binding HTH domain
[Transcription]; Region: COG4977"
/db_xref="CDD:227311"
misc_feature 170995..171567
/locus_tag="Caci_0160"
/note="AraC transcriptional regulators having a Type 1
glutamine amidotransferase (GATase1)-like domain; Region:
GATase1_AraC_1; cd03137"
/db_xref="CDD:153231"
misc_feature 171313..171315
/locus_tag="Caci_0160"
/note="conserved cys residue [active]"
/db_xref="CDD:153231"
misc_feature 171817..171933
/locus_tag="Caci_0160"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:215763"
gene 171991..172635
/locus_tag="Caci_0161"
/db_xref="GeneID:8331486"
CDS 171991..172635
/locus_tag="Caci_0161"
/inference="protein motif:PFAM:PF01965"
/note="PFAM: ThiJ/PfpI domain protein;
KEGG: sco:SCO6747 hypothetical protein"
/codon_start=1
/transl_table=11
/product="ThiJ/PfpI domain-containing protein"
/protein_id="YP_003110957.1"
/db_xref="GI:256389393"
/db_xref="InterPro:IPR002818"
/db_xref="GeneID:8331486"
/translation="MPRIAIPLFPGFMPLDVVGPYDVLRFLPDHEVVFVASDPGVING
ADGGFGLQAQATPADIDTCDILLVPGGRGTRDHAARKDLTDWIARIHQTTTWTTSVCT
GSLLLGAAGILTDTDATTHWNAIPALESFGAHYTPERVVRRGKVVTAAGVSSGIDMAL
TLAGLIEGDEFAQAVQLWIEYDPQPPHDTGSVAKAGADLTARTPGLIGGGGRRG"
misc_feature 171997..172515
/locus_tag="Caci_0161"
/note="DJ-1 family protein; Region: not_thiJ; TIGR01383"
/db_xref="CDD:213612"
misc_feature 172000..172536
/locus_tag="Caci_0161"
/note="Type 1 glutamine amidotransferase (GATase1)-like
domain found in a subgroup of proteins similar to PfpI
from Pyrococcus furiosus; Region: GATase1_PfpI_2; cd03139"
/db_xref="CDD:153233"
misc_feature 172291..172293
/locus_tag="Caci_0161"
/note="conserved cys residue [active]"
/db_xref="CDD:153233"
gene 172943..173746
/locus_tag="Caci_0162"
/db_xref="GeneID:8331487"
CDS 172943..173746
/locus_tag="Caci_0162"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR;
KEGG: sen:SACE_3371 3-oxoacyl-[acyl-carrier- protein]
reductase"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_003110958.1"
/db_xref="GI:256389394"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR002424"
/db_xref="GeneID:8331487"
/translation="MDLGLRGRVAVVTGGSKGIGLAVVRTLLEEGAFVVAVSRAGSAG
LGEVGGPNLLHVAGDLMDAGFAAEVVEQTVAAFGGLDILVNNAGGPPPGVVLPRGPFL
GGGDVDWQAVFDFNLFAVVRLTRVALPHLIERGGTIVNVSSTLARQPATNNYEYSAAK
AALSHVSKGLAEEFGPQGVRVNTVLPGVTRTNWWTDEGGVADMFAGAMGIDRDTLLDK
ALPESLRLSMGRIVEPQEVADAVVLLASPRSRSTNGSEFVVDGGLLKEL"
misc_feature 172943..173728
/locus_tag="Caci_0162"
/note="short chain dehydrogenase; Provisional; Region:
PRK06523"
/db_xref="CDD:180604"
misc_feature 172970..173722
/locus_tag="Caci_0162"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(172982..172984,172988..172999,173054..173059,
173114..173122,173198..173206,173285..173287,
173363..173371,173408..173410,173420..173422,
173498..173509,173513..173515,173546..173548)
/locus_tag="Caci_0162"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(173288..173290,173369..173371,173408..173410,
173420..173422)
/locus_tag="Caci_0162"
/note="active site"
/db_xref="CDD:212491"
gene 173877..175469
/locus_tag="Caci_0163"
/db_xref="GeneID:8331488"
CDS 173877..175469
/locus_tag="Caci_0163"
/inference="protein motif:PFAM:PF01039"
/note="PFAM: carboxyl transferase;
KEGG: mjl:Mjls_4686 propionyl-CoA carboxylase"
/codon_start=1
/transl_table=11
/product="carboxyl transferase"
/protein_id="YP_003110959.1"
/db_xref="GI:256389395"
/db_xref="InterPro:IPR000022"
/db_xref="InterPro:IPR011762"
/db_xref="InterPro:IPR011763"
/db_xref="GeneID:8331488"
/translation="MPVLRSQLDPTSEAARADREAVLGALERIRELQQKVLAGGGEKY
AERHRSRGKLLARERLDLLLDEDSPFLELAALAGTHDPAETVGGVSGIGTVSGVECMI
GANDPTVKGGAVGPSGVAKQLRMLEIAERNRLPLISLTESAGADLPRQADIFVPGGAS
FKGISRLSAAGIPTLSIVFGSSTAGGAYVPGMSEFTVMVKNQAAVYLGGPPLVKMAIN
EDTDDETLGGADMHARVSGLADYLARDERDAIRIGRQIIADLRWRKRGPGPTESADEP
LYAAEDLLSLAPMDLRRPVEVREILARVLDGSRFSEFKPLYGTTLVCGWGSIHGYPVG
ILANNGILFSEEANKGAHFVQLANAREVPLLFVQNITGFMVGSRYERGGIIKDGSKLI
NAVSNSAVPHVTLMVGASYGAGNYGMSGRAYDPRFVFTWPNHRIAVMGGRELAGVMSI
VQRQKAEKAGQPYDEAADAQTREFVEAMVDGQSDAVYASGRLWDDGVIDPRQSRTVLG
LALSAIDSGPVVGTRAFAPFRM"
misc_feature 173883..175466
/locus_tag="Caci_0163"
/note="3-methylcrotonyl-CoA carboxylase, beta chain;
Region: PLN02820"
/db_xref="CDD:178415"
misc_feature <174210..174668
/locus_tag="Caci_0163"
/note="Acetyl-CoA carboxylase alpha subunit [Lipid
metabolism]; Region: AccA; cl17345"
/db_xref="CDD:247899"
gene 175557..177545
/locus_tag="Caci_0164"
/db_xref="GeneID:8331489"
CDS 175557..177545
/locus_tag="Caci_0164"
/inference="protein motif:PFAM:PF02786"
/note="PFAM: carbamoyl-phosphate synthase L chain ATP-
binding; biotin carboxylase domain protein; biotin/lipoyl
attachment domain-containing protein; carbamoyl-phosphate
synthetase large chain domain protein;
KEGG: mgi:Mflv_4614 carbamoyl-phosphate synthase L chain,
ATP-binding"
/codon_start=1
/transl_table=11
/product="carbamoyl-phosphate synthase L chain ATP-
binding"
/protein_id="YP_003110960.1"
/db_xref="GI:256389396"
/db_xref="InterPro:IPR000089"
/db_xref="InterPro:IPR001882"
/db_xref="InterPro:IPR005479"
/db_xref="InterPro:IPR005481"
/db_xref="InterPro:IPR005482"
/db_xref="InterPro:IPR011761"
/db_xref="InterPro:IPR011764"
/db_xref="GeneID:8331489"
/translation="MPTYPTFSTVLVANRGEIARRVFRTAKAMGLRTVAVYSDPDADA
PHVREADVAVALGGSTSAESYLDAAKILDAARKTGADAVHPGYGFLSENAGFAEACAQ
AGIVFVGPSPDAIRKMGIKHEAKAIAKAAGVPVLPDALLTTDEPDDWRRSSEGVGFPL
LVKASAGGGGKGMRLVSSVEELENAVSGARREAAAAFGDGTVFLERYLAASRHIEIQV
FGDTHGNAVFYGERECSVQRRHQKVVEEAPSSAVGAAVRAKMGEVACALVRELGYVGA
GTVEFLFDDTDDSYYFLEMNTRLQVEHPVTEEVWGQDLVRRQFEVAAGAVLTAPDPEA
LHGHAIEVRLYAEDPARKYIPSPGTLALYEHADVPGIRYEDGVRSGSVVSHYYDPMLS
KVVATGLTRGEAALKLASALAGMRIQGLKTNRDQLVAILRDPDFLAGTTRTDFLDLHP
ALAAPEDRTDVTAHLAAALAVSVHRRRSAGGATAFAPAGWRLLPYDGANAAWTRQDVR
RAPETPITYRFDSSTLYLIHGGAEYEVSLRDLGPDSVRVAVDGVDRLCRVRVAEDTVV
WVDDSDGGHSAWKPTPRFPEDADAFAADDGAAEVPGTVVAISVAAGDRVKAGQVLVSM
EAMKMEHQVKAGRDGVVGSVDCAVGQFVDAHQVLVTLT"
misc_feature 175575..177539
/locus_tag="Caci_0164"
/note="Acetyl/propionyl-CoA carboxylase, alpha subunit
[Lipid metabolism]; Region: COG4770"
/db_xref="CDD:227111"
misc_feature 175575..175898
/locus_tag="Caci_0164"
/note="Carbamoyl-phosphate synthase L chain, N-terminal
domain; Region: CPSase_L_chain; pfam00289"
/db_xref="CDD:201133"
misc_feature 175950..176537
/locus_tag="Caci_0164"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl17255"
/db_xref="CDD:247809"
misc_feature 176577..176897
/locus_tag="Caci_0164"
/note="Biotin carboxylase C-terminal domain; Region:
Biotin_carb_C; pfam02785"
/db_xref="CDD:202395"
misc_feature 177354..177539
/locus_tag="Caci_0164"
/note="The biotinyl-domain or biotin carboxyl carrier
protein (BCCP) domain is present in all biotin-dependent
enzymes, such as acetyl-CoA carboxylase, pyruvate
carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
carboxylase, geranyl-CoA carboxylase; Region:
biotinyl_domain; cd06850"
/db_xref="CDD:133459"
misc_feature order(177408..177410,177435..177443,177462..177464)
/locus_tag="Caci_0164"
/note="carboxyltransferase (CT) interaction site; other
site"
/db_xref="CDD:133459"
misc_feature 177438..177440
/locus_tag="Caci_0164"
/note="biotinylation site [posttranslational
modification]; other site"
/db_xref="CDD:133459"
gene 177622..178383
/locus_tag="Caci_0165"
/db_xref="GeneID:8331490"
CDS 177622..178383
/locus_tag="Caci_0165"
/inference="similar to AA sequence:KEGG:MAV_3523"
/note="KEGG: mav:MAV_3523 acyl-CoA synthase"
/codon_start=1
/transl_table=11
/product="acyl-CoA synthase"
/protein_id="YP_003110961.1"
/db_xref="GI:256389397"
/db_xref="GeneID:8331490"
/translation="MPATQSTETRDPVEFHWLGDIVRVNLDGNTHGSVLAYGAQEWDW
TEFDSRIRKCVTGIRSDRLQRGQRVAVLARNHPVHFETLFAASNMGLVCTWLDWRLDR
AHVVHALNESEARILFVGEEFLDLVEDSMMEISSVVSTITVGGPEDEYEEWLETHETH
EALLRAAREVAASSGRGDEPVLRLYSSTGKKGPTRGEYTHRALLTSAVEILRRKSLTR
GDVEAVDAPVTVHEAAVRVLANMSAGAATVLVQEE"
misc_feature 177730..>178254
/locus_tag="Caci_0165"
/note="Adenylate forming domain, Class I; Region:
AFD_class_I; cl17068"
/db_xref="CDD:247692"
misc_feature order(178168..178170,178177..178182,178186..178197,
178201..178206)
/locus_tag="Caci_0165"
/note="acyl-activating enzyme (AAE) consensus motif; other
site"
/db_xref="CDD:213270"
gene complement(178394..179059)
/locus_tag="Caci_0166"
/db_xref="GeneID:8331491"
CDS complement(178394..179059)
/locus_tag="Caci_0166"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: sgr:SGR_4377 TetR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003110962.1"
/db_xref="GI:256389398"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331491"
/translation="MSGKERREQLIEIGRTLFAERGFDATSVEEIATKAGVSKPVVYE
HFGGKEGLYAVVVDREMAKLLSMVTSGLTGEHARELLEQAAFALLDYIESSTDGFRIL
VRDSPVTTSTGNFASLISDIASQVEDLLGVHFMHRGYDPKLAPMYAQMLVGMVALTGQ
WWLDVRKPPKAEVAAHLVNLAWNGLSHLEGQPRLIVQEQAEAKVRRAARKTERAARAD
AKR"
misc_feature complement(178481..179050)
/locus_tag="Caci_0166"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:224228"
misc_feature complement(178892..179032)
/locus_tag="Caci_0166"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene complement(179179..180144)
/locus_tag="Caci_0167"
/db_xref="GeneID:8331492"
CDS complement(179179..180144)
/locus_tag="Caci_0167"
/EC_number="1.14.19.1"
/inference="protein motif:PRIAM:1.14.19.1"
/note="PFAM: fatty acid desaturase;
KEGG: sgr:SGR_4378 fatty acid desaturase"
/codon_start=1
/transl_table=11
/product="stearoyl-CoA 9-desaturase"
/protein_id="YP_003110963.1"
/db_xref="GI:256389399"
/db_xref="InterPro:IPR005804"
/db_xref="InterPro:IPR015876"
/db_xref="GeneID:8331492"
/translation="MTQTSVPQQQPTAPATVRGTRGGETQSFKERIALSFVIGVPFAA
LVIAVPVVWGWGMTWTDLIIAVVMYAISGHGVTVGFHRLFTHSSFKAKKALRVGLAIA
GSLAVQGPVIRWVADHRKHHRYSDHDGDPHSPWRYGETLPALMKGLWHAHIGWLYNAE
QTNQQQYAPDLLKDRAIVRVSRAFPYLVLVSLLLPAAVGGLVTWSWQGILTAFFWGSL
VRIALLHHTTWSINSICHAVGERPFRSRDRSGNVWWLAVLSMGESWHNLHHSDPTAAR
HGVLRGQIDSSARIIWLFEKFGWVRDVRWPSRERVALKLRGEAAP"
misc_feature complement(179314..179973)
/locus_tag="Caci_0167"
/note="Fatty acid desaturase; Region: FA_desaturase;
pfam00487"
/db_xref="CDD:215943"
misc_feature complement(<179677..179973)
/locus_tag="Caci_0167"
/note="The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like
CD includes the delta-9 and delta-11 acyl CoA desaturases
found in various eukaryotes including vertebrates,
insects, higher plants, and fungi. The delta-9 acyl-lipid
desaturases are found in a wide...; Region:
Delta9-FADS-like; cd03505"
/db_xref="CDD:239582"
misc_feature complement(order(179779..179784,179791..179793,
179887..179889,179902..179904))
/locus_tag="Caci_0167"
/note="Di-iron ligands [ion binding]; other site"
/db_xref="CDD:239582"
misc_feature complement(179233..>179523)
/locus_tag="Caci_0167"
/note="The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like
CD includes the delta-9 and delta-11 acyl CoA desaturases
found in various eukaryotes including vertebrates,
insects, higher plants, and fungi. The delta-9 acyl-lipid
desaturases are found in a wide...; Region:
Delta9-FADS-like; cd03505"
/db_xref="CDD:239582"
gene 180370..180441
/locus_tag="Caci_R0003"
/note="tRNA-Gln1"
/db_xref="GeneID:8331493"
tRNA 180370..180441
/locus_tag="Caci_R0003"
/product="tRNA-Gln"
/db_xref="GeneID:8331493"
gene 180559..182085
/locus_tag="Caci_0168"
/db_xref="GeneID:8331494"
CDS 180559..182085
/locus_tag="Caci_0168"
/inference="protein motif:TFAM:TIGR01173"
/note="TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase;
PFAM: nucleotidyl transferase; transferase hexapeptide
repeat containing protein;
KEGG: sco:SCO3122 nucleotidyltransferase"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylglucosamine pyrophosphorylase"
/protein_id="YP_003110964.1"
/db_xref="GI:256389400"
/db_xref="InterPro:IPR001451"
/db_xref="InterPro:IPR005835"
/db_xref="InterPro:IPR005882"
/db_xref="GeneID:8331494"
/translation="MTDQHAPTVIILAAGEGKRMKSATPKVLHELCGRTMLGHVVAAA
QDLAPSRLAVVVGKGRDLVAPHVAAIAPEARIVVQEPQNGTGQAARLALEALVAEGGP
AEGTVLVLLGDGAMVTGGTLRHLIAVHESSGNAVTDLTAVVPDPRGLGRILREPDGTA
EGRVLGIVEEKDCTPAQATIPEINSGIFAFDGKLLRDALSRLTTDNAQGEELLTDVLA
IAVGDGLPVGAVVAADYHEVLAANDRAQLADLRRLMNQRITRQWMLEGVTIVDPATTW
IDVHATLEPDATIRPNTQLEGATRIAAGADVGPNCTLRDTVVGERARVTNATTDGAEI
GPEASVGPYTYLRPGTKLGRKSKAGGFVEMKKSTIGEGTKVPHLAYIGDATIGAGTNI
GAGVITANYDGYNKFPTRIGDHAFVGTNTTLIAPAEVADGAYIAAGSAVNMPVGPGEL
AVARGRQRNIAGYVARKRPDSVAAQAAARAAERAAAGGQPAVETNPTGGGPGAQADAV
"
misc_feature 180583..181971
/locus_tag="Caci_0168"
/note="bifunctional N-acetylglucosamine-1-phosphate
uridyltransferase/glucosamine-1-phosphate
acetyltransferase; Provisional; Region: glmU; PRK14352"
/db_xref="CDD:184641"
misc_feature 180583..181299
/locus_tag="Caci_0168"
/note="N-terminal domain of bacterial GlmU; Region:
GT2_GlmU_N_bac; cd02540"
/db_xref="CDD:133020"
misc_feature order(180592..180600,180721..180723,180811..180813,
180832..180834,180889..180891,180895..180897)
/locus_tag="Caci_0168"
/note="Substrate binding site; other site"
/db_xref="CDD:133020"
misc_feature order(180895..180897,181282..181284)
/locus_tag="Caci_0168"
/note="Mg++ binding site; other site"
/db_xref="CDD:133020"
misc_feature 181354..181929
/locus_tag="Caci_0168"
/note="N-acetyl-glucosamine-1-phosphate uridyltransferase
(GlmU), C-terminal left-handed beta-helix (LbH)
acetyltransferase domain: GlmU is also known as
UDP-N-acetylglucosamine pyrophosphorylase. It is a
bifunctional bacterial enzyme that catalyzes two...;
Region: LbH_GlmU_C; cd03353"
/db_xref="CDD:100044"
misc_feature order(181597..181599,181645..181647,181651..181653,
181687..181689,181696..181698,181729..181740,
181753..181761,181774..181776,181804..181806,
181810..181815,181864..181869,181918..181920)
/locus_tag="Caci_0168"
/note="active site"
/db_xref="CDD:100044"
misc_feature order(181597..181599,181645..181647,181651..181653,
181687..181689,181696..181698,181729..181737,
181756..181758,181774..181776)
/locus_tag="Caci_0168"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100044"
misc_feature order(181738..181740,181753..181755,181759..181761,
181810..181815,181864..181869,181918..181920)
/locus_tag="Caci_0168"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:100044"
gene 182148..183128
/locus_tag="Caci_0169"
/db_xref="GeneID:8331495"
CDS 182148..183128
/locus_tag="Caci_0169"
/EC_number="2.7.6.1"
/inference="protein motif:TFAM:TIGR01251"
/note="KEGG: sgr:SGR_4383 ribose-phosphate
pyrophosphokinase;
TIGRFAM: ribose-phosphate pyrophosphokinase;
PFAM: phosphoribosyltransferase"
/codon_start=1
/transl_table=11
/product="ribose-phosphate pyrophosphokinase"
/protein_id="YP_003110965.1"
/db_xref="GI:256389401"
/db_xref="InterPro:IPR000836"
/db_xref="InterPro:IPR000842"
/db_xref="InterPro:IPR005946"
/db_xref="GeneID:8331495"
/translation="MTGLKTTGEKKLMLFTGRAYPELAQEVAEELGVEIAPMKAHDFA
NGEIYTRFEESVRGSDAFVIQCHSAPINHSIMEQLIMVDALKRASSKRITVITPFYGY
ARQDKKHKGREPISARLMADFFATAGADRLMAVDLHTDQIQGYFDGPVDHLFALPVLV
DYIKGKYDTSKLTVVSPDAGRVRTADRWTDRLNTPLAIVHKRRDPNIPNTVSVHEIVG
EVKGRTCVLVDDMVDTAGTICAAAEALFENGAAEVIIAATHAVLSDPATDRLKNSRIS
EVIFTNTLPIPDEKRFDKMTVLSIAPMLARAIREVFEDGSVTSMFDDHKH"
misc_feature 182181..182531
/locus_tag="Caci_0169"
/note="N-terminal domain of ribose phosphate
pyrophosphokinase; Region: Pribosyltran_N; pfam13793"
/db_xref="CDD:222383"
misc_feature 182214..183113
/locus_tag="Caci_0169"
/note="ribose-phosphate pyrophosphokinase; Provisional;
Region: PRK03092"
/db_xref="CDD:179535"
misc_feature 182610..182996
/locus_tag="Caci_0169"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(182679..182681,182685..182687,182832..182840,
182844..182858,182928..182930)
/locus_tag="Caci_0169"
/note="active site"
/db_xref="CDD:206754"
gene 183392..184015
/locus_tag="Caci_0170"
/db_xref="GeneID:8331496"
CDS 183392..184015
/locus_tag="Caci_0170"
/inference="protein motif:TFAM:TIGR00731"
/note="TIGRFAM: ribosomal 5S rRNA E-loop binding protein
Ctc/L25/TL5;
PFAM: ribosomal protein L25;
KEGG: tfu:Tfu_0416 50S ribosomal protein L25/general
stress protein Ctc"
/codon_start=1
/transl_table=11
/product="ribosomal 5S rRNA E-loop binding protein
Ctc/L25/TL5"
/protein_id="YP_003110966.1"
/db_xref="GI:256389402"
/db_xref="InterPro:IPR001021"
/db_xref="GeneID:8331496"
/translation="MSQIRISAEDRTEFGKGFARRARAVNKVPAVVYGHGEPVRHILL
PGHDLMIALRTPNVLLNLEFGDGKAQLVLPKDVQKDPVKRTLEHVDLVLVRSGEKVTV
DIPITVTGEVVGGAVLDHSLNNLTVTAEATHIPTGIEVDVDRKEEGFQLFVRDLELPA
GSELVTDGDQLVLQVVVTRAEVSEEAAEGEGDAEGEAAEGASEESAE"
misc_feature 183392..183928
/locus_tag="Caci_0170"
/note="50S ribosomal protein L25/general stress protein
Ctc; Reviewed; Region: PRK05618"
/db_xref="CDD:235534"
misc_feature 183407..183664
/locus_tag="Caci_0170"
/note="Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding
domain; Region: Ribosomal_L25_TL5_CTC; cd00495"
/db_xref="CDD:198379"
misc_feature order(183422..183424,183446..183454,183458..183460,
183488..183496,183506..183508,183614..183619,
183623..183625,183653..183655,183659..183661)
/locus_tag="Caci_0170"
/note="5S rRNA interface [nucleotide binding]; other site"
/db_xref="CDD:198379"
misc_feature order(183494..183496,183563..183565,183602..183604,
183614..183616)
/locus_tag="Caci_0170"
/note="CTC domain interface [polypeptide binding]; other
site"
/db_xref="CDD:198379"
misc_feature order(183608..183613,183620..183622,183641..183643)
/locus_tag="Caci_0170"
/note="L16 interface [polypeptide binding]; other site"
/db_xref="CDD:198379"
gene 184044..184640
/locus_tag="Caci_0171"
/db_xref="GeneID:8331497"
CDS 184044..184640
/locus_tag="Caci_0171"
/EC_number="3.1.1.29"
/inference="protein motif:TFAM:TIGR00447"
/note="KEGG: sco:SCO3125 peptidyl-tRNA hydrolase;
TIGRFAM: peptidyl-tRNA hydrolase;
PFAM: peptidyl-tRNA hydrolase"
/codon_start=1
/transl_table=11
/product="peptidyl-tRNA hydrolase"
/protein_id="YP_003110967.1"
/db_xref="GI:256389403"
/db_xref="InterPro:IPR001328"
/db_xref="GeneID:8331497"
/translation="MTTTEARDQLWLIAGLGNPGPGYAGNRHNAGFMVVDLLAARVGG
KFKSHKARADVVEGRLGVGGPRVVLAKPKTFMNLSGGPVKALRDFYKIEPAQIIAVHD
ELDVDYGVLRLKLGGGDNGHNGLRSITSSLGTKEYHRVRFGVGRPPGRQDPADFVLKD
FSSTEKKDLDYNVDRAADAVEDLIRRGLVEAQNIYHAA"
misc_feature 184077..184595
/locus_tag="Caci_0171"
/note="Peptidyl-tRNA hydrolase (PTH) is a monomeric
protein that cleaves the ester bond linking the nascent
peptide and tRNA when peptidyl-tRNA is released
prematurely from the ribosome. This ensures the recycling
of peptidyl-tRNAs into tRNAs produced through...; Region:
PTH; cd00462"
/db_xref="CDD:238259"
misc_feature order(184095..184097,184125..184127,184266..184271,
184347..184349,184407..184409)
/locus_tag="Caci_0171"
/note="putative active site [active]"
/db_xref="CDD:238259"
misc_feature 184125..184127
/locus_tag="Caci_0171"
/note="catalytic residue [active]"
/db_xref="CDD:238259"
gene 184839..185807
/locus_tag="Caci_0172"
/db_xref="GeneID:8331498"
CDS 184839..185807
/locus_tag="Caci_0172"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: ATPase AAA;
KEGG: sco:SCO5452 ABC transporter ATP-binding subunit"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_003110968.1"
/db_xref="GI:256389404"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8331498"
/translation="MPAIEVRGLRKAYGDVTAVEDVSFEVAEGEIFGILGPNGAGKTT
TVECVSGLRTPDAGEVRVLGLDPRRDREDVRQVLGVQLQESQLPGKIHVREALELYAS
FYRDPADVDRLLAQWELTEKAGARFGKLSGGQKQRLAVALAMVGKPRVVVLDELTTGL
DPHARRTAWEMVQAVRDSGVTVLLVTHFMEEAERLCDRVAIIDAGRVVALDTPAAMAA
RGPAAGQRMRFRPSAPVEDADLLALPEVRSVERHGAHLEVSGTSEVIGAVTAYLARRQ
IIAAELRVEQSSLDDAFIALTTHATTTTHAAQTMQTAQTAQTAKES"
misc_feature 184839..185726
/locus_tag="Caci_0172"
/note="ABC-type multidrug transport system, ATPase
component [Defense mechanisms]; Region: CcmA; COG1131"
/db_xref="CDD:224054"
misc_feature 184848..185459
/locus_tag="Caci_0172"
/note="ATP-binding cassette domain of the drug resistance
transporter and related proteins, subfamily A; Region:
ABC_DR_subfamily_A; cd03230"
/db_xref="CDD:213197"
misc_feature 184944..184967
/locus_tag="Caci_0172"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213197"
misc_feature order(184953..184958,184962..184970,185085..185087,
185298..185303,185397..185399)
/locus_tag="Caci_0172"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213197"
misc_feature 185076..185087
/locus_tag="Caci_0172"
/note="Q-loop/lid; other site"
/db_xref="CDD:213197"
misc_feature 185226..185255
/locus_tag="Caci_0172"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213197"
misc_feature 185286..185303
/locus_tag="Caci_0172"
/note="Walker B; other site"
/db_xref="CDD:213197"
misc_feature 185310..185321
/locus_tag="Caci_0172"
/note="D-loop; other site"
/db_xref="CDD:213197"
misc_feature 185385..185405
/locus_tag="Caci_0172"
/note="H-loop/switch region; other site"
/db_xref="CDD:213197"
gene 185807..186595
/locus_tag="Caci_0173"
/db_xref="GeneID:8331499"
CDS 185807..186595
/locus_tag="Caci_0173"
/inference="protein motif:PFAM:PF01061"
/note="PFAM: ABC transporter;
KEGG: sgr:SGR_876 ABC transporter permease"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_003110969.1"
/db_xref="GI:256389405"
/db_xref="InterPro:IPR003544"
/db_xref="InterPro:IPR013525"
/db_xref="GeneID:8331499"
/translation="MSTATFSSRSSRLLPEFRMTGNGFRTLVRTQARLLWREPAVVLS
GIALPVLLIIVFGCIPSFGKPAASLGGRTTMDVYVPTFAMLSSVLTALTALPVTFADL
RERGVLRRLAVSPVPAAGLLAAQVTVIATTAAVTAASVVLIGVAGFGASLPAHLALVL
ASYILGTTALLAIGLLIAALAPSAGVATGFGVPTMILNFFFAGVYVPLQQLPSVLRTA
SGFVPYGAIVDTWSGTGAAWQHLTVLAVYTVVGALAAARVFKWE"
misc_feature <186029..186589
/locus_tag="Caci_0173"
/note="ABC-type multidrug transport system, permease
component [Defense mechanisms]; Region: COG0842"
/db_xref="CDD:223912"
gene 186609..187907
/locus_tag="Caci_0174"
/db_xref="GeneID:8331500"
CDS 186609..187907
/locus_tag="Caci_0174"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
histidine kinase dimerisation and phosphoacceptor region;
SMART: ATP-binding region ATPase domain protein;
KEGG: sco:SCO5454 two-component system sensor kinase"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_003110970.1"
/db_xref="GI:256389406"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR006052"
/db_xref="InterPro:IPR011712"
/db_xref="GeneID:8331500"
/translation="MVESATVQRWIPYAGLAVSLTLALIIGPRTGVYYTVVLGGSAAA
ALWVRRGRALLDAPNPPVLRATVYYAVLLALLATLILTSPLFGFFGFTGYLHAMVLPG
RTKLFGIAGTAGAMATTQMGGIVNIHGAGVYLYLVLVAVNLLIAGTLTVTGAAEEEHR
RELAEANERLHEMLEENAGLHAQLVAQAREAGVLDERQRLAGEIHDTIAQGLTGIVRQ
LEVVERFDDDVERRKHHLTLARELARESLAEARRSVQALRPGPLAVAQLPEALAELAA
SWSRTAGIEARVEVSGEAVALSPEVEVALFRAAQEALANAGKYSGAGRVGVTVSYTSD
VVVLDVVDDGAGFDPEEVRRRGADSASENGTGYGLSAMRSRLRQVGGTLTIESEPGDG
TAISAAVPLVTLAAETASAGASARASTGAVAEAVTEAVTG"
misc_feature <187131..187811
/locus_tag="Caci_0174"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG4585"
/db_xref="CDD:226951"
misc_feature 187194..>187319
/locus_tag="Caci_0174"
/note="Histidine kinase; Region: HisKA_3; pfam07730"
/db_xref="CDD:219540"
misc_feature 187521..187796
/locus_tag="Caci_0174"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature order(187539..187541,187551..187553,187560..187562,
187626..187628,187632..187634,187638..187640,
187644..187649,187704..187715,187761..187763,
187767..187769,187782..187787,187791..187793)
/locus_tag="Caci_0174"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature 187551..187553
/locus_tag="Caci_0174"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature order(187638..187640,187644..187646,187704..187706,
187710..187712)
/locus_tag="Caci_0174"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene 187936..188604
/locus_tag="Caci_0175"
/db_xref="GeneID:8331501"
CDS 187936..188604
/locus_tag="Caci_0175"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; regulatory
protein LuxR;
SMART: response regulator receiver; regulatory protein
LuxR;
KEGG: sco:SCO5455 two-component system response regulator"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_003110971.1"
/db_xref="GI:256389407"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:8331501"
/translation="MIDRVSGDSSPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEAS
DGAQALVRAAESGPDVVLMDLRMPTMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLP
AIEAGATGYLLKDAPREDLIRAVRAAAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDA
LTERELEVLRLVASGTTNRETARKLFISEATVKTHLLHAYAKFGVRDRAAAVAEAYKR
GLLK"
misc_feature 187972..188598
/locus_tag="Caci_0175"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:225107"
misc_feature 187978..188322
/locus_tag="Caci_0175"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature order(187987..187992,188125..188127,188149..188151,
188209..188211,188266..188268,188275..188280)
/locus_tag="Caci_0175"
/note="active site"
/db_xref="CDD:238088"
misc_feature 188125..188127
/locus_tag="Caci_0175"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature order(188134..188139,188143..188151)
/locus_tag="Caci_0175"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature 188275..188283
/locus_tag="Caci_0175"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature 188416..188580
/locus_tag="Caci_0175"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature order(188419..188427,188464..188472,188494..188499,
188503..188508,188512..188526,188557..188559)
/locus_tag="Caci_0175"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature order(188452..188454,188458..188460,188464..188466,
188557..188565,188572..188574)
/locus_tag="Caci_0175"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(188628..188966)
/locus_tag="Caci_0176"
/db_xref="GeneID:8331502"
CDS complement(188628..188966)
/locus_tag="Caci_0176"
/inference="protein motif:PFAM:PF07045"
/note="PFAM: protein of unknown function DUF1330;
KEGG: mlo:mll3541 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110972.1"
/db_xref="GI:256389408"
/db_xref="InterPro:IPR010753"
/db_xref="GeneID:8331502"
/translation="MTAYALAHVRSVELCADIVEYLERIQGTMDPFGGRFAFHGGEKE
VVEGAWTGDLILIEFPTLDAVHSWWTSPEYRAIKNLRTDHMAADIVVFDTLPADYNVG
ATAAKLAKLL"
misc_feature complement(188688..188966)
/locus_tag="Caci_0176"
/note="Protein of unknown function (DUF1330); Region:
DUF1330; cl02288"
/db_xref="CDD:242966"
gene 189108..189254
/locus_tag="Caci_0177"
/db_xref="GeneID:8331503"
CDS 189108..189254
/locus_tag="Caci_0177"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110973.1"
/db_xref="GI:256389409"
/db_xref="GeneID:8331503"
/translation="MSSMGMVLNAFIAAAVGGICLSGLFKRGRERRVARISGTADRYE
APVR"
gene complement(189512..192334)
/locus_tag="Caci_0178"
/db_xref="GeneID:8331504"
CDS complement(189512..192334)
/locus_tag="Caci_0178"
/EC_number="4.1.1.31"
/inference="protein motif:PRIAM:4.1.1.31"
/note="PFAM: phosphoenolpyruvate carboxylase;
KEGG: sco:SCO3127 phosphoenolpyruvate carboxylase"
/codon_start=1
/transl_table=11
/product="phosphoenolpyruvate carboxylase"
/protein_id="YP_003110974.1"
/db_xref="GI:256389410"
/db_xref="InterPro:IPR001449"
/db_xref="GeneID:8331504"
/translation="MSAVPSPKNDDAAVETPTDSPTARANDTANDNPPRTADDAELRA
AIRRLGDLLGQTLVRQHGPELLEQVEAIRALGKQGADVSELLAAVDPEQAIKLVRAFT
AYFNLANTAEQVHRGRELAATRAAEGSWLGQAVDRIQAAGLAGTAAEAVSHLSVRPVF
TAHPTEAARRTVLAKLRKVAELLEAPQTAYNERRLAETVEQLWQTDEIRITRPEPVDE
ARNAVYYLDELAAHAAPEVLEELAVELRRLGVELPLSARPLSFGSWIGGDRDGNPNVT
PQMTLDVLELQHEHAIRTALASMDALREILSTSERIAAPTEALRASLDADLEALPEIP
NRYRRLNAEEPYRLKATTIRQKLLNTRTRIAEGRQHDPRRDYLGTSELLRDLSLMRDS
LYADRGELIATGELETAIRTIAAFGLHHAVLDVREHADAHHHVLAQLFDRLGDQPWRY
SDLPRDYRTRLLAKELASSRPLSALGQVPADTLLDAAGVKSFGVFTAIRTAFEKYGPD
VIESYIVSMTRGVDDLFAAVVLAREAGLVDVHAHTAAIGFVPLLETPDELKIAGSILD
EMLSDPSYAAIVAARGGVQEVMLGYSDSNKMGGISTSQWEIHRAQRELRDTALRHGIR
IRLFHGRGGSVGRGGGPSHDAILAQPWGTLDGEIKVTEQGEVISDKYAIPALARENLE
LTLAATLEATVLHRAPRQSAEDLATWSATMEGVSSAGQDRYRELVEHPDLPAYFFAST
PVDLLGDLHLGSRPSRRPDTSAGIDGLRAIPWVFGWTQSRQIVPGWFGVGTGLAAARQ
NPAFAGTDWQDMYERWHFFRNFLGNVSMTLAKTDLRIARHYVETLVPRELHHFFDTIT
EEYERTVAEVLRITGESELLGRNETLARTLRVRDMYLDPISYMQVSLLKRQREATKAG
LPVDPDLARALLLSVNGIAAGLKNTG"
misc_feature complement(189515..192220)
/locus_tag="Caci_0178"
/note="Phosphoenolpyruvate carboxylase [Energy production
and conversion]; Region: Ppc; COG2352"
/db_xref="CDD:225227"
misc_feature complement(189515..191878)
/locus_tag="Caci_0178"
/note="Phosphoenolpyruvate carboxylase; Region: PEPcase;
cl17418"
/db_xref="CDD:247972"
gene 192506..193534
/locus_tag="Caci_0179"
/db_xref="GeneID:8331505"
CDS 192506..193534
/locus_tag="Caci_0179"
/inference="protein motif:TFAM:TIGR02227"
/note="TIGRFAM: signal peptidase I;
PFAM: peptidase S24 and S26 domain protein;
KEGG: sgr:SGR_6861 signal peptidase I"
/codon_start=1
/transl_table=11
/product="signal peptidase I"
/protein_id="YP_003110975.1"
/db_xref="GI:256389411"
/db_xref="InterPro:IPR000223"
/db_xref="InterPro:IPR011056"
/db_xref="GeneID:8331505"
/translation="MAATDPGAPVGSQPAEPPFGDGYGTTGNGYGQQHGFGTENGYGT
ENGYGAENGYGSAPGFASENGYSQDQGYASEHAFGTQNGYDPVAGDGSAATDPATDPD
AADEELAAVPSRGGGRRAARTKAKRRRIPAWLEIVGYVVISLTLTSLIKTFLVQMYYI
PSPSMEPTTYKGDRVFVDKLSSWVGGAPARGQVIVFHDPHNWLMSSAGSTGGAINLPD
VLAAVGILPDQHDDLLIKRIIGTGGDTIECKTQDGPVYRNGVALDESSYIMNGKQGMP
CYNGVYKVTVPQGDLWVLGDNREHSGDSSWNYLKKGGDAGFVPTKNVVGHVVGVVSWL
RDDHPAGS"
misc_feature 192911..193471
/locus_tag="Caci_0179"
/note="signal peptidase I, bacterial type; Region:
sigpep_I_bact; TIGR02227"
/db_xref="CDD:233790"
misc_feature 192971..193447
/locus_tag="Caci_0179"
/note="The S26 Type I signal peptidase (SPase; LepB;
leader peptidase B; leader peptidase I; EC 3.4.21.89)
family members are essential membrane-bound serine
proteases that function to cleave the amino-terminal
signal peptide extension from proteins that are...;
Region: S26_SPase_I; cd06530"
/db_xref="CDD:119398"
misc_feature order(192995..192997,193211..193213)
/locus_tag="Caci_0179"
/note="Catalytic site [active]"
/db_xref="CDD:119398"
gene 193634..195694
/locus_tag="Caci_0180"
/db_xref="GeneID:8331506"
CDS 193634..195694
/locus_tag="Caci_0180"
/EC_number="3.1.4.3"
/inference="protein motif:TFAM:TIGR03396"
/note="KEGG: sma:SAV_1715 non-hemolytic phospholipase C;
TIGRFAM: phospholipase C, phosphocholine-specific;
PFAM: phosphoesterase; protein of unknown function DUF756"
/codon_start=1
/transl_table=11
/product="phospholipase C, phosphocholine-specific"
/protein_id="YP_003110976.1"
/db_xref="GI:256389412"
/db_xref="InterPro:IPR006311"
/db_xref="InterPro:IPR007312"
/db_xref="InterPro:IPR008475"
/db_xref="InterPro:IPR017767"
/db_xref="GeneID:8331506"
/translation="MTAVNRRRFLQITGGTAAATSMPMLTASIARAAAVRPARRTGTI
KDIEHVVILMQENRSFDHYFGTLRGVRGFGDPRPARLPNGKAVWHQADAAGNEILPWR
PTGVPDLGLKFLDGLDHSWNGGHHAWNQGNYDQWVPAKGPGTMAHFERQDIPFHFALA
DAFTVCDAYHCSLMTSTDPNRYYLWTGFTGNDGKAGGPVLDNAEAGYDWTTYPERLQA
AGVSWKIYQDIGTGLDAKGSWGWTDDAYIGNYGDTSVLYFHQYQNAKPGDPLYDNART
GTNAAAGQGYFDLLAQDVKNGKLPQVSWITAPEAFSEHPNWPVNYGAWYVSQVLDILS
SDEDLWSKTALFIMYDENDGFFDHVVPPFVPGGAVGGASTVDTSTEYYSAGAGFDAGS
YGLGLRVPMFVVSPWSKGGWVDSETFDHTSVIRFLEKRFGVHEPNISPWRRAVCGDLT
SAFDFGLRETEVPALPSTASYVPPDHARHSSYPVTLPASASLPKQEAGRRPARALPYD
LAADGRIAGGALRIGFASRGSAGASFVVTSILDKTGPWSYTVGAGHTLDGSWKLSGAY
DYDVRGANGFLREFKGDAAKAGLEVVAEHVGNSQNLKLTLTNTGSADVTATVVDSYGC
DGKAVLRVRAGKHATHVVPAGASDGWYDATVTSDHDAAYVRRFAGHTENGRPSVSDPA
IITG"
sig_peptide 193634..193732
/locus_tag="Caci_0180"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.999) with cleavage site probability 0.958 at
residue 33"
misc_feature 193646..195682
/locus_tag="Caci_0180"
/note="phospholipase C, phosphocholine-specific,
Pseudomonas-type; Region: PC_PLC; TIGR03396"
/db_xref="CDD:234195"
misc_feature 193772..194932
/locus_tag="Caci_0180"
/note="Phosphoesterase family; Region: Phosphoesterase;
pfam04185"
/db_xref="CDD:217948"
misc_feature 195134..195382
/locus_tag="Caci_0180"
/note="Domain of unknown function (DUF756); Region:
DUF756; pfam05506"
/db_xref="CDD:218616"
misc_feature 195383..195643
/locus_tag="Caci_0180"
/note="Domain of unknown function (DUF756); Region:
DUF756; pfam05506"
/db_xref="CDD:218616"
gene 195809..196141
/locus_tag="Caci_0181"
/db_xref="GeneID:8331507"
CDS 195809..196141
/locus_tag="Caci_0181"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sde:Sde_3881 pectate lyase-like"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110977.1"
/db_xref="GI:256389413"
/db_xref="InterPro:IPR002155"
/db_xref="GeneID:8331507"
/translation="MKSRIASALAVLACVGALAACSGKGSAGSGGTAPAGAGVAASTS
SSASSPSSASTSSAPASGGSSASQSTGSHGVTEDPDGDLTSLDQELSDINGALSSAEP
TQTAGDNG"
sig_peptide 195809..195892
/locus_tag="Caci_0181"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.519 at
residue 28"
gene 196190..196912
/locus_tag="Caci_0182"
/db_xref="GeneID:8331508"
CDS 196190..196912
/locus_tag="Caci_0182"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: GJ22283 gene product from transcript GJ22283-
RA"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110978.1"
/db_xref="GI:256389414"
/db_xref="GeneID:8331508"
/translation="MTLRTRLSAAAVGALIAVGAVALPAQAATASDPAAGLAKAKAAV
TEGITDRLTTLGHLQTALTGYKEVTDAARGTLTQVLSSDVSGLTALKTKVAAETTEAA
VRTDGKTMVDDYRVYVLVAPKVHLTHALDVEGAALAKLVKVHDALADRLAKDPTANTA
ANKALLADMTSQIQSATTAIAGKDAALLALQPTPDGKALTASVKAISAPAKDARDDIK
KAVDDAKKVRDALKGTKTTTKS"
sig_peptide 196190..196273
/locus_tag="Caci_0182"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.980 at
residue 28"
gene complement(197393..197938)
/locus_tag="Caci_0183"
/db_xref="GeneID:8331509"
CDS complement(197393..197938)
/locus_tag="Caci_0183"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: bpl:BURPS1106A_2083 outer membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110979.1"
/db_xref="GI:256389415"
/db_xref="GeneID:8331509"
/translation="MAFLKNATVIAALASAGVVGMAGIASAAADDAWNGGAEHHKTGD
NNVGQGGLIPVNALNNVNVSPNLGCLAHNTVPDLNVQSLVGLVPIGVGLNHLLEHTHL
NVLSNGNIDTDVNDNSCTSNQGSSQAGNNSRGSVGAGDSSSSHSTGDGAGSQNNGAGA
GAGGLIGSSGLLGKGGLNLGG"
sig_peptide complement(197855..197938)
/locus_tag="Caci_0183"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.637 at
residue 28"
gene complement(198345..198791)
/locus_tag="Caci_0184"
/db_xref="GeneID:8331510"
CDS complement(198345..198791)
/locus_tag="Caci_0184"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110980.1"
/db_xref="GI:256389416"
/db_xref="GeneID:8331510"
/translation="MRTRAIFTAAAATAATLGGVLASAGTAAATTTKTTTPSRPTAPQ
ASPTPGVLAVENALELADDWCVAPLHFAGPLAADPLPTASHACGHGRAGGGVRVLSDL
CIAPITTDDPSGSWAAPSTPCKNAGSAGSGFGILRDVSVAGVQATF"
sig_peptide complement(198705..198791)
/locus_tag="Caci_0184"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.412 at
residue 29"
gene complement(198853..199518)
/locus_tag="Caci_0185"
/db_xref="GeneID:8331511"
CDS complement(198853..199518)
/locus_tag="Caci_0185"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: hmo:HM1_1325 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110981.1"
/db_xref="GI:256389417"
/db_xref="InterPro:IPR003267"
/db_xref="GeneID:8331511"
/translation="MRKYLSLAVVALSSGGALFAAAGAASAATSTDSLRAAPWQATSP
LAMHAAPFGDHDVMGLCGMQRDNVRTGQIDADLVQKLCAGEGDMMTPPVPGPPPVMTP
PPPPMGSPSPCTEVCKPVHHHHPKPPTPPTHPTPPPPPPVTQPCPPPPCPPVTPPPPP
PCPPVMPPPPVPCPPPTPNPCPPGHEHGWSAEPDAATQAAPAAGNAVAGLPILGSVAG
GLL"
sig_peptide complement(199435..199518)
/locus_tag="Caci_0185"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.979 at
residue 28"
gene complement(199793..200272)
/locus_tag="Caci_0186"
/db_xref="GeneID:8331512"
CDS complement(199793..200272)
/locus_tag="Caci_0186"
/inference="protein motif:TFAM:TIGR00778"
/note="TIGRFAM: alkylhydroperoxidase like protein, AhpD
family;
PFAM: carboxymuconolactone decarboxylase;
KEGG: sma:SAV_788 hypothetical protein"
/codon_start=1
/transl_table=11
/product="alkylhydroperoxidase"
/protein_id="YP_003110982.1"
/db_xref="GI:256389418"
/db_xref="InterPro:IPR003779"
/db_xref="InterPro:IPR004675"
/db_xref="GeneID:8331512"
/translation="MEARLNTFATPTGAKFGKYLIAAGRVLREAGVPVATLHLVEIRA
SQINGCGFCLDMHTKDATAAGETAERLNMVAAWREAACYTEAERAALELTEAGTRLAD
GTGVADEVWDAAAKHFDEDQLATLVAQIALINAFNRGNVMVKQPAGDYVPGQFDDAE"
misc_feature complement(200036..200185)
/locus_tag="Caci_0186"
/note="alkylhydroperoxidase AhpD family core domain;
Region: ahpD_dom; TIGR00778"
/db_xref="CDD:213559"
misc_feature complement(199859..>200164)
/locus_tag="Caci_0186"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG2128"
/db_xref="CDD:225039"
gene complement(200393..201403)
/locus_tag="Caci_0187"
/db_xref="GeneID:8331513"
CDS complement(200393..201403)
/locus_tag="Caci_0187"
/inference="similar to AA sequence:KEGG:SAV_3557"
/note="KEGG: sma:SAV_3557 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110983.1"
/db_xref="GI:256389419"
/db_xref="GeneID:8331513"
/translation="MAQASAQRHGIPNGQFAGRIIEFSDPELDRKFPHGIYLTMHGYP
EFAVYARHTVQIADPPSGLSVDEIRVTDVIAANLLAADAGDPLWQTRPNTATPQGWTW
AHAAESRMLHCVPIELHGAFRHHGGMATLKADRGRSGLFTEGMLEPVAFERSGSVPED
AMAQLEQHLGFALPPSYRRFLAGTDGGRPISPAVNLAGGFVADQWMFGLRREDPHQDL
VYANQALYDRFTEEYLGIGYVQGGMLALKIRGAEAGSVWLFDDDDPRDSESRDAGSVC
AELLKKIGSDFDDFARHLVALPQQIVDIARSAVDSGHAKSITDIEHLGAALPEGLKAP
RR"
misc_feature complement(201002..201130)
/locus_tag="Caci_0187"
/note="A nuclease of the HNH/ENDO VII superfamily with
conserved WHH; Region: WHH; pfam14414"
/db_xref="CDD:206581"
misc_feature complement(200534..200929)
/locus_tag="Caci_0187"
/note="SMI1 / KNR4 family (SUKH-1); Region: SMI1_KNR4;
pfam09346"
/db_xref="CDD:220193"
gene 201624..205172
/locus_tag="Caci_0188"
/db_xref="GeneID:8331514"
CDS 201624..205172
/locus_tag="Caci_0188"
/inference="protein motif:TFAM:TIGR00580"
/note="KEGG: sma:SAV_3549 transcriptional-repair coupling
factor;
TIGRFAM: transcription-repair coupling factor;
PFAM: transcription factor CarD; helicase; TRCF domain
protein; DEAD/DEAH box helicase;
SMART: DEAD-like helicases; helicase"
/codon_start=1
/transl_table=11
/product="transcription-repair coupling factor"
/protein_id="YP_003110984.1"
/db_xref="GI:256389420"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR003711"
/db_xref="InterPro:IPR004576"
/db_xref="InterPro:IPR005118"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:8331514"
/translation="MSLSGLLDAVSADPGVAALLEAAATAGRTSFDLAAPRSVRPFAL
AALARAQGPAGRPVLAVTATGREAEDLVAALRGLLDPETVVDFPSWETLPHERLSPRS
DTVGRRLAVLRRLVHPDAATEGAGALKVVVAPIRSVLQPQVKGLADLVPVAARTGAEI
DLDDLVNRLAAAAYTRTDLVDKRGEFAVRGGIVDVFPPTEEHPLRLEFWGDQIEEIRY
FKVADQRSLEVAEHGLWAPPCRELLLTDEVRKRAAALMEDHPELADILGKVSEGIGVE
GMESLAPVLVDDMELLIDLLPAGSPIVLCDPERVRTRAADLAATSAEFLDASWAATAG
GGQTPIDLGAASLKDLASVREHAITLGLPWWSLTPFAPDLELLPEEDATEISEIHDTE
QYGGDTGRALADVRARISEGWRVVLVTQGHGSADRLVEVLKGADIGARYVPELDTVPE
PALATVATASIEHGFIAADLKLWVITEQDVSGQRTATKDMSRMPSRRRNVIDPLQLKA
GDPVVHEQHGVGRYVEMAQRTVAGATREYLVIEYAAAKRGQPGDRLFVPTDQLDQVTK
YVGGEAPSLHRLGGADWQKAKSRARKAVKQIAGDLVKLYSARMAAPGHAFAADTPWQR
ELEDAFPYVETPDQLACIDEVKSDMEKPVPMDRLICGDVGYGKTEIAVRAAFKAVQDG
KQVAVLVPTTLLVQQHFSTFAERYAQFPVTLKGLSRFQTDKEAAEVLRGVADGSVDVV
IGTHRLLANSVKFKRLGLVIVDEEQRFGVEHKEQLKQARANVDVLTMSATPIPRTLEM
AVTGIREMSTIQTPPEERHPVLTFVGPYEERQISAAIRRELLREGQAFYIHNRVESID
RAASRLRALVPEARIATAHGQMNEHVLEKLIVDFWNKEYDVLVCTTIVESGIDITNAN
TLIVERADNFGLSQLHQLRGRVGRGRERAYSYFTYPPEKPLTETAHERLATIAQHTDL
GAGMYVAMKDLEIRGAGNLLGGEQSGHIEGVGFDLYIRMVGEAVEEYRAQAEGREVEE
QVEIRVDLPVDAHLPHDYIPGERLRLEAYKRIAGATTHEELAEVRQEFTDRYGRFPQP
VENLLAVAAFRIDARAAGLTEVAVQGNFVKFGPVKLRESQEMRLLRLFPKTLVKAATD
TMLVPKPMTARIGGQPLRDQELLGWARDLIDAVLKM"
misc_feature 201795..205151
/locus_tag="Caci_0188"
/note="Transcription-repair coupling factor (superfamily
II helicase) [DNA replication, recombination, and repair /
Transcription]; Region: Mfd; COG1197"
/db_xref="CDD:224118"
misc_feature 203136..203441
/locus_tag="Caci_0188"
/note="CarD-like/TRCF domain; Region: CarD_TRCF;
smart01058"
/db_xref="CDD:215001"
misc_feature 203586..203996
/locus_tag="Caci_0188"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:238005"
misc_feature 203613..203627
/locus_tag="Caci_0188"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238005"
misc_feature 203907..203918
/locus_tag="Caci_0188"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:238005"
misc_feature 204075..204464
/locus_tag="Caci_0188"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:238034"
misc_feature order(204171..204182,204246..204251,204324..204332)
/locus_tag="Caci_0188"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:238034"
misc_feature order(204348..204350,204414..204416,204426..204428,
204435..204437)
/locus_tag="Caci_0188"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:238034"
misc_feature 204732..205025
/locus_tag="Caci_0188"
/note="This domain is found in proteins necessary for
strand-specific repair in DNA such as TRCF in Escherichia
coli; Region: TRCF; smart00982"
/db_xref="CDD:198050"
gene 205284..206531
/locus_tag="Caci_0189"
/db_xref="GeneID:8331515"
CDS 205284..206531
/locus_tag="Caci_0189"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: ade:Adeh_4255 major facilitator transporter"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily protein"
/protein_id="YP_003110985.1"
/db_xref="GI:256389421"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331515"
/translation="MDATDRLPSQVKALIVARAVNQLGGFSLAFLTVLLTRSFGTSLT
TAGIVSAAFGLATIPSRLAGGRLADHWGRRRTIVAGLVALAVAQLGLAAAPDLITATI
CAVAMGLAFELFEPPSQATIADAVPPARRASAFELLTTAVAAGSLAAGVIADIVGRWS
LRWLFVVDAGTGLACAAIVALALAPDAVRKPEHGAESDQPATSAISPWRDPALLIATV
SGTVFALVSMLMLSALPLALGAVGLNPASAGLIMAASTGTLVLARPVLRRRWLAELPH
SATFVLGYLLMAAGLCGYAVAHTLPALLVPTALYSLGNLLVLGRSFAVVSELAPASAS
ARYLAVYGLSWGVATLLAPLVGTWLIGVSGAGLLWGVSAGVCGVMAVAQPWVVRRVRD
SQRDLGVIHSTKAAVDRYDAVSI"
misc_feature 205320..206429
/locus_tag="Caci_0189"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 205356..206342
/locus_tag="Caci_0189"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:219516"
misc_feature order(205356..205358,205365..205373,205377..205382,
205431..205433,205440..205445,205452..205454,
205464..205469,205473..205478,205614..205619,
205626..205631,205638..205643,205650..205652,
205686..205691,205698..205703,205719..205721,
205950..205952,205959..205964,205971..205976,
205983..205985,206025..206027,206037..206039,
206049..206051,206058..206060,206070..206072,
206214..206216,206223..206228,206235..206237,
206247..206252,206259..206261,206292..206297,
206304..206309,206316..206321,206328..206330)
/locus_tag="Caci_0189"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 206576..207328
/locus_tag="Caci_0190"
/db_xref="GeneID:8331516"
CDS 206576..207328
/locus_tag="Caci_0190"
/inference="similar to AA sequence:KEGG:SAV_3538"
/note="KEGG: sma:SAV_3538 lipoprotein"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="YP_003110986.1"
/db_xref="GI:256389422"
/db_xref="GeneID:8331516"
/translation="MIQARSVRLAAVIVLGGAVALATSACGGPMQAGAAAVVQGQRTT
DATVQDQVASIVSLVQHNNLQQGDVTDEERSALAKAQINLLVQQAVWQKVADDNGVKV
TAADDAKEHSALVEQARGSLQGTKFTGSDNEAVALADAESQQNSSGLAPSSVPVYSHI
QALVTAVIDDQATKLRVDPNDQNSLPALQGAILPMLSKASTQIDVKISPRYGSFDAST
RQVVAAQTSWIRPTKAQVAAAAAAQAQQQQSQ"
sig_peptide 206576..206680
/locus_tag="Caci_0190"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.743 at
residue 35"
gene complement(207411..208415)
/locus_tag="Caci_0191"
/db_xref="GeneID:8331517"
CDS complement(207411..208415)
/locus_tag="Caci_0191"
/inference="similar to AA sequence:KEGG:SCO7720"
/note="KEGG: sco:SCO7720 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110987.1"
/db_xref="GI:256389423"
/db_xref="GeneID:8331517"
/translation="MRGKGVNYDTGFFPGGQDSRPDFDPETARRELRVIAEDLHCTAV
RISGALPDRLEAAAQAAADAGLEVWFAPFPCEASREDLLELLADCAQRAERLRAAGAE
VVFVAGCETSLFCPGYFDGDDSYARIETLGNGGMALWSRLGEIMASFNGYLVEAAATV
REHFQGKVTYAAGPWEFIDWAPFDFVSVDAYRSAENRDKFADQIRAHFKHGKPVVATE
FGCTPYVGSGDRGGMAWAILDDSVEPPVVNGDYLRSEDEQSAYFTELYDVFEEAGVDS
AFWFTFATFRALHDPSDPRKDLDLAAYGTVKMTGPDTPELNWEPKKVFHTIAERYAAS
"
misc_feature complement(<207726..>208007)
/locus_tag="Caci_0191"
/note="Glycosyl hydrolase catalytic core; Region:
Glyco_hydro_cc; pfam11790"
/db_xref="CDD:221224"
gene complement(208489..209226)
/locus_tag="Caci_0192"
/db_xref="GeneID:8331518"
CDS complement(208489..209226)
/locus_tag="Caci_0192"
/inference="similar to AA sequence:KEGG:SAV_4727"
/note="KEGG: sma:SAV_4727 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110988.1"
/db_xref="GI:256389424"
/db_xref="InterPro:IPR006162"
/db_xref="GeneID:8331518"
/translation="MTAMTAHTHRTADVTADGAGVADVADGETPHPLKQALLPLAVDI
AIPLGSYYALHAGLGMSNAAALGLSSVVPAIRTIVAAVGKRQANALAALMLTVNIVAI
ALTFVSGDARLMLAKDSGVSSVIALGILWSVRGGKPMMSAGLKPFVTKGDAKQTAAWD
ALRIESSTFRAKENLYSVIWGAWLLTECLARLAGAFLLPVSTMAWLGTVILIVAIAGA
CVTGGAAVEPLEKLVAAHVEAASDAEH"
gene 209307..209954
/locus_tag="Caci_0193"
/db_xref="GeneID:8331519"
CDS 209307..209954
/locus_tag="Caci_0193"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: sco:SCO4450 TetR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003110989.1"
/db_xref="GI:256389425"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331519"
/translation="METQGLRERKKRQTREEIANVATALFAELGFEKVTIAEVAAAAG
VAKMTVTNHFPLKEDLVFDRAEHIVHGLPDAVAARPDGEPVLAAARRYHAQQLAAGDP
TLGHRGVDFSRMVESSPALAARERQIHDQREQALAEVLVAQTRPAEELTARVAAAQIA
GVYRVLYFTARRFLLDGLQGPEMAETLGACAQRAFTLLEVDLSGFDPRPRLRSTA"
gene 209951..211027
/locus_tag="Caci_0194"
/db_xref="GeneID:8331520"
CDS 209951..211027
/locus_tag="Caci_0194"
/inference="protein motif:TFAM:TIGR00444"
/note="functions in degradation of stringent response
intracellular messenger ppGpp; in Escherichia coli this
gene is co-transcribed with the toxin/antitoxin genes
mazEF; activity of MazG is inhibited by MazEF in vitro;
ppGpp inhibits mazEF expression; MazG thus works in
limiting the toxic activity of the MazF toxin induced
during starvation; MazG also interacts with the GTPase
protein Era"
/codon_start=1
/transl_table=11
/product="nucleoside triphosphate pyrophosphohydrolase"
/protein_id="YP_003110990.1"
/db_xref="GI:256389426"
/db_xref="InterPro:IPR004518"
/db_xref="InterPro:IPR011551"
/db_xref="GeneID:8331520"
/translation="MTEAPPPDPENPQGPENSGRIVFLATSPRVALGLLSWPAWETLR
AADVVFAGDADHPHIPYVEQATGAVVALPDHSPSMAAERLLEAATPARTVVWLAEDEE
YDEELAVALGNRLVLLASADLPELEVLPGSYDLPGAHLLDLVDVMNRLRSPGGCPWDA
EQTHASLVKYLLEEAYETVETIEDGDPLTPGPGRDALREELGDVLLQVMFHSRIAEEH
EADPFSVDDVADGIVAKLIRRHPHVFADVEAPTAEHVAANWEQIKAAEKQRESVTEGV
PMTQPALALVAKLAGRVRKSGLVVPAGPAPDLPDTADELGEQLLATAIKAVGAGWDPE
EALRTAARRYRDRVITAEEELARG"
misc_feature 210005..211021
/locus_tag="Caci_0194"
/note="nucleoside triphosphate pyrophosphohydrolase;
Reviewed; Region: PRK12334"
/db_xref="CDD:237065"
misc_feature 210374..210739
/locus_tag="Caci_0194"
/note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
3.6.1.8) N-terminal tandem-domain of MazG proteins from
Escherichia coli and bacterial homologs; Region:
NTP-PPase_MazG_Nterm; cd11528"
/db_xref="CDD:212135"
misc_feature order(210374..210379,210386..210388,210440..210445,
210452..210454,210461..210466,210473..210478,
210485..210487,210494..210496,210509..210511,
210539..210544,210551..210568,210572..210574,
210581..210583,210614..210616,210623..210637,
210641..210649,210653..210658)
/locus_tag="Caci_0194"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:212135"
misc_feature order(210470..210472,210479..210481,210548..210550,
210557..210559)
/locus_tag="Caci_0194"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:212135"
gene 211121..211381
/locus_tag="Caci_0195"
/db_xref="GeneID:8331521"
CDS 211121..211381
/locus_tag="Caci_0195"
/inference="protein motif:TFAM:TIGR01411"
/note="TIGRFAM: twin-arginine translocation protein,
TatA/E family subunit;
PFAM: sec-independent translocation protein mttA/Hcf106;
KEGG: mle:ML1331 twin argininte translocase protein A"
/codon_start=1
/transl_table=11
/product="twin-arginine translocation protein, TatA/E
family subunit"
/protein_id="YP_003110991.1"
/db_xref="GI:256389427"
/db_xref="InterPro:IPR003369"
/db_xref="InterPro:IPR006312"
/db_xref="GeneID:8331521"
/translation="MGDLQPWHIIVILVVVFLLFGAKKMPDMARSVGQSLRIFKSEMR
QSQKETEEVAKQANDSVRVTPAVENSGSVPASDAAEKHTSAT"
misc_feature 211121..211357
/locus_tag="Caci_0195"
/note="Sec-independent protein secretion pathway
components [Intracellular trafficking and secretion];
Region: TatA; COG1826"
/db_xref="CDD:224739"
misc_feature 211121..>211318
/locus_tag="Caci_0195"
/note="twin arginine translocase protein A; Provisional;
Region: tatA; PRK00575"
/db_xref="CDD:234797"
gene complement(211522..212493)
/locus_tag="Caci_0196"
/db_xref="GeneID:8331522"
CDS complement(211522..212493)
/locus_tag="Caci_0196"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sen:SACE_5661 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110992.1"
/db_xref="GI:256389428"
/db_xref="GeneID:8331522"
/translation="MPPQDWAPPMPPQQDRVPPMPQPDRGPYPQFTQQPPPPQFTPPQ
MPGMPYPDEEPPPRKNTGRIIAGVVAGVVLLGGAGGIYLLTKGDSKKDTKPQPVAAAT
SATTPATTPAAPGTPASSGATSFPNNSYTGSAAAPPASASSTGGGATLDNAATDKTPF
TAQALVAQSFTDDKNVAYALKSAQPQPCAKVGDAAVQTIVKSAKCTDFMAASWIDPAN
SRIVVSAMVIPYQDAATATAIYKKLSTTHTGDYAQWCPPAGQPGADTCAKLAKAGAVT
REGKFGSFHRYVLITTAVYADLRNDDSQKDWLTSAAHGAFQNTLPGQ"
gene 212732..214468
/locus_tag="Caci_0197"
/db_xref="GeneID:8331523"
CDS 212732..214468
/locus_tag="Caci_0197"
/inference="protein motif:PFAM:PF05960"
/note="PFAM: protein of unknown function DUF885;
KEGG: ace:Acel_1952 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003110993.1"
/db_xref="GI:256389429"
/db_xref="InterPro:IPR010281"
/db_xref="GeneID:8331523"
/translation="MADTPDARFEALAADILDGLWRRHPDWAGTVGLHEYDAELPDRS
AGGLAAEAAWLAGRAEDLADLDPAALSVPNRVDAAILANQLAALRFQIEDLREDEWNP
AEANPGVALYTLLARDYAPAAQRLSAFAGRLEQVPSALLDNRSLLAGKPLSRIHVELA
IGQFEGTVDLIGAELDAAVAAASEAASKAGSEADSEAVSQARKAIDAVRPDASAALQE
HIVWLKERLAAGDAGEEEFRDPRIGAELFTRKLSLSLDAESDAAAILARAEADLDRVS
AEIAEAAADYEGVAVPSDEAERSALVRRVLDRLAESAPDNETILEYSRQALLAQFAFV
RDHDLVTVYPDPYEVVEMPEVHRGVSVAYCDPPGPMEPAEVQTILAISPTPEGWTQER
VDSFFREYNRHMLHNLMVHEAMPGHLLQLQHSRRQQAPTSVRAALWSGSFVEGWAVYA
EALMARHGYPGDGDPRAVRMQQLKMQIRMIINTVLDSRIHCHGMTEDEAMALMTGRGY
QEDGEAAGKWRRALLSSTQLSTYYVGYKEVSDLVRDLRADHPEWSERQVHDAVLGHGS
PPARYLRDLIAA"
misc_feature 212801..214465
/locus_tag="Caci_0197"
/note="Bacterial protein of unknown function (DUF885);
Region: DUF885; pfam05960"
/db_xref="CDD:218827"
gene complement(214500..215156)
/locus_tag="Caci_0198"
/db_xref="GeneID:8331524"
CDS complement(214500..215156)
/locus_tag="Caci_0198"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; regulatory
protein LuxR;
SMART: regulatory protein LuxR; response regulator
receiver;
KEGG: sma:SAV_4878 two-component system response
regulator"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_003110994.1"
/db_xref="GI:256389430"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:8331524"
/translation="MPEPIRVLIAEDAVLLREGLARLLADSGFDVVAKVDDGKGMVEA
ADALKPDVIVADVRMPPSFTDEGLRAAVQVRAKYPDMAILVFSQAVEAAYAQELFSTS
ANGLGYLLKERVAEVEEFVDALKRVAAGGTALDPEVVAQLLGRRKRNDPLETLTPRER
EVLAMMAEGRSNSAIAAGLFVTEKAVEKHTSSIFTKLNLTPAAEDHRRVMAVLRYLNV
"
misc_feature complement(214509..215144)
/locus_tag="Caci_0198"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:225107"
misc_feature complement(214773..215135)
/locus_tag="Caci_0198"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature complement(order(214821..214826,214833..214835,
214896..214898,214956..214958,214989..214991,
215121..215126))
/locus_tag="Caci_0198"
/note="active site"
/db_xref="CDD:238088"
misc_feature complement(214989..214991)
/locus_tag="Caci_0198"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature complement(order(214956..214961,214971..214973,
214977..214982))
/locus_tag="Caci_0198"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature complement(order(214812..214814,214821..214826))
/locus_tag="Caci_0198"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature complement(214515..214694)
/locus_tag="Caci_0198"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(214533..214535,214584..214598,
214602..214607,214611..214616,214638..214646,
214683..214691))
/locus_tag="Caci_0198"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(214518..214520,214527..214535,
214644..214646,214650..214652,214656..214658))
/locus_tag="Caci_0198"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(215132..216490)
/locus_tag="Caci_0199"
/db_xref="GeneID:8331525"
CDS complement(215132..216490)
/locus_tag="Caci_0199"
/inference="protein motif:PFAM:PF07730"
/note="PFAM: histidine kinase dimerisation and
phosphoacceptor region; ATP-binding region ATPase domain
protein;
KEGG: sma:SAV_4879 two-component system sensor kinase"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_003110995.1"
/db_xref="GI:256389431"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR011712"
/db_xref="GeneID:8331525"
/translation="MITTVGAKAAARREGDTAPTLGPGELLKGPFTGRALRQQGYLLV
SFVAAFVQVLVLTVTLALGGALVVLVVGLPLLLAGLVSLRWNSRRERLRILRLTGERV
PEPYREPGPSGNPLQRLLGHLSDPATWRDLVHLVVASGLGLGWFLVAVGSWVLPLGAV
TLPFWYTALPEHRIPLMHVNGSEYYISTLPSILAFSAVTLAFVWLVNPTLLELGTRTQ
TGLGRALLGLSRLELDRRETALRTTRSQAVSAAEAERRRIERDLHDGAQQRLVALAMD
LGRAKSKLKTGDEADSEAAAQLVAEAHEGVKLALSELRDLARGIHPAVLTDRGLDAAL
SALAGRSPIPVEVDADLPWRPSPEVESAAYFVASEALANMAKHAHATRAWIELEIRED
HLRMIVGDNGVGGAQTDPGGGLDGLSDRIAPLDGILSVSSPLGGPTQIIMEMPCPNPS
AS"
misc_feature complement(215876..>216241)
/locus_tag="Caci_0199"
/note="Putative sensor; Region: Sensor; pfam13796"
/db_xref="CDD:222385"
misc_feature complement(215528..215710)
/locus_tag="Caci_0199"
/note="Histidine kinase; Region: HisKA_3; pfam07730"
/db_xref="CDD:219540"
misc_feature complement(215156..215419)
/locus_tag="Caci_0199"
/note="Histidine kinase-, DNA gyrase B-, and HSP90-like
ATPase; Region: HATPase_c; pfam02518"
/db_xref="CDD:217081"
misc_feature complement(order(215171..215173,215177..215182,
215195..215197,215201..215203,215240..215245,
215249..215254,215279..215281,215285..215287,
215291..215293,215297..215299,215363..215365,
215372..215374,215384..215386))
/locus_tag="Caci_0199"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(215372..215374)
/locus_tag="Caci_0199"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(order(215243..215245,215252..215254,
215279..215281,215285..215287))
/locus_tag="Caci_0199"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene 216643..217491
/locus_tag="Caci_0200"
/db_xref="GeneID:8331526"
CDS 216643..217491
/locus_tag="Caci_0200"
/inference="protein motif:PFAM:PF02861"
/note="PFAM: Clp domain protein;
KEGG: rha:RHA1_ro00243 ATP-dependent Clp protease
ATP-binding subunit"
/codon_start=1
/transl_table=11
/product="Clp domain-containing protein"
/protein_id="YP_003110996.1"
/db_xref="GI:256389432"
/db_xref="InterPro:IPR004176"
/db_xref="GeneID:8331526"
/translation="MEELPTLPVLIARIESSHPFSDPLARLADAVETGASISALADHL
VGHFVDEARAAGASWAQIGVALGVSKQAVQQRFVPREPATVADFDIEVQRFSRFTPRC
LNCVLGAEKIAVATGAAAVTPTHILIGLFVEPQSLAIHALADNGADPAQVRAAAVETL
PPAPEGATVLATATATAPSQEPAIPGNSLPFTPEARKTFDLAVRAALSAGHNYVGTEH
LLLALAGDPKSETALLLTSFGLTRDGLEASVQRLLMEFMANSGRRGSGVSPLDPAEQG
APPAEG"
misc_feature 216967..217122
/locus_tag="Caci_0200"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:217254"
misc_feature 217246..217401
/locus_tag="Caci_0200"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:217254"
gene 217533..218819
/gene="eno"
/locus_tag="Caci_0201"
/db_xref="GeneID:8331527"
CDS 217533..218819
/gene="eno"
/locus_tag="Caci_0201"
/EC_number="4.2.1.11"
/inference="protein motif:TFAM:TIGR01060"
/note="enolase; catalyzes the formation of
phosphoenolpyruvate from 2-phospho-D-glycerate in
glycolysis"
/codon_start=1
/transl_table=11
/product="phosphopyruvate hydratase"
/protein_id="YP_003110997.1"
/db_xref="GI:256389433"
/db_xref="InterPro:IPR000941"
/db_xref="GeneID:8331527"
/translation="MASIEAINAREILDSRGNPTVEVEVLLEDGSFARAAVPSGASTG
AFEAVELRDGDAARYGGKGVERAVQGVLDEIYPAVVGEDASDQRLIDQAMIDLDATPN
KARLGANALLGVSLAVAKAAAESAELPLFRYLGGPNAHTLPVPMMNILNGGAHADSNV
DIQEFMIAPIGAGSFREALRWGAEVYHALKSVLKERGLNTGLGDEGGFAPSLPSNRDA
LDLILVAIEKAGYTPGRDIALALDVAASEFYKDGAYQFEGKSRTASEMTDYYAELVDA
YPLVSIEDPLFEDDWDGWKILTDRLGTQVQIVGDDLFVTNPERLARGIAGGQANALLV
KVNQIGTLTETFDAVQLAHRNGYRCMMSHRSGETEDTTIADLAVAVDCGQIKTGAPAR
SDRVAKYNQLLRIEEELDDAARYAGRSAFPRFTHEG"
misc_feature 217533..218804
/gene="eno"
/locus_tag="Caci_0201"
/note="enolase; Provisional; Region: eno; PRK00077"
/db_xref="CDD:234617"
misc_feature 217548..218756
/gene="eno"
/locus_tag="Caci_0201"
/note="Enolase: Enolases are homodimeric enzymes that
catalyse the reversible dehydration of
2-phospho-D-glycerate to phosphoenolpyruvate as part of
the glycolytic and gluconeogenesis pathways. The reaction
is facilitated by the presence of metal ions; Region:
enolase; cd03313"
/db_xref="CDD:239429"
misc_feature order(217554..217556,217560..217586,217596..217598,
217632..217634,217998..218006,218067..218072,
218079..218084,218091..218096,218133..218138,
218157..218159,218163..218165,218631..218639,
218706..218714,218718..218723,218730..218732,
218739..218744,218751..218753)
/gene="eno"
/locus_tag="Caci_0201"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:239429"
misc_feature order(217656..217658,218256..218258,218379..218381,
218460..218462)
/gene="eno"
/locus_tag="Caci_0201"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:239429"
misc_feature order(217995..217997,218145..218147,218535..218537,
218619..218627,218688..218690)
/gene="eno"
/locus_tag="Caci_0201"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:239429"
gene 218877..219518
/locus_tag="Caci_0202"
/db_xref="GeneID:8331528"
CDS 218877..219518
/locus_tag="Caci_0202"
/inference="protein motif:PFAM:PF04977"
/note="PFAM: septum formation initiator;
KEGG: sma:SAV_3532 hypothetical protein"
/codon_start=1
/transl_table=11
/product="septum formation initiator"
/protein_id="YP_003110998.1"
/db_xref="GI:256389434"
/db_xref="InterPro:IPR007060"
/db_xref="GeneID:8331528"
/translation="MKSAGSGSTPGRLSAVPTQRQDAASGTSRSSGDGGSGSGASAKR
RTRYTARAAILMLVVCALVLALAYPLQQYFSQSSQINQLKQQNAHKRTQVQQLGRQLT
QWQDPDYVKIQARLRLHYVFPGETGLRLLGAGDAATGGPDGTTGPSQGSSAWYAQLWN
SVTAASGAPTSSGAPTTPATSGASGSAGASGPSGTPTPSGGPARSATSPAPGH"
misc_feature 219078..219266
/locus_tag="Caci_0202"
/note="Septum formation initiator; Region: DivIC;
pfam04977"
/db_xref="CDD:203138"
gene complement(219557..220213)
/locus_tag="Caci_0203"
/db_xref="GeneID:8331529"
CDS complement(219557..220213)
/locus_tag="Caci_0203"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; regulatory
protein LuxR;
SMART: regulatory protein LuxR; response regulator
receiver;
KEGG: sma:SAV_4878 two-component system response
regulator"
/codon_start=1
/transl_table=11
/product="LuxR family transcriptional regulator"
/protein_id="YP_003110999.1"
/db_xref="GI:256389435"
/db_xref="InterPro:IPR000792"
/db_xref="InterPro:IPR001789"
/db_xref="GeneID:8331529"
/translation="MKESSAVRIMIAEDSAILRDGLVQILTKRGHEILAAVPNADELL
AAIAVGAPDAVVLDIRMPPTHTDEGLRAALELRRSHPKVGVLLFSQYVETRYARDLFS
GQVSGVGYLLKERVADVSEFVEALAKIAAGGTVLDPEVVVQLLGSRPTDALTAREREV
LGLMAEGRSNAAIGKKLVLADSSVEKHISNIFTKLGLPPADEDHRRVLAVLKYLGVAP
"
misc_feature complement(219572..220192)
/locus_tag="Caci_0203"
/note="Response regulator containing a CheY-like receiver
domain and an HTH DNA-binding domain [Signal transduction
mechanisms / Transcription]; Region: CitB; COG2197"
/db_xref="CDD:225107"
misc_feature complement(219824..220186)
/locus_tag="Caci_0203"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature complement(order(219872..219877,219884..219886,
219947..219949,220007..220009,220040..220042,
220172..220177))
/locus_tag="Caci_0203"
/note="active site"
/db_xref="CDD:238088"
misc_feature complement(220040..220042)
/locus_tag="Caci_0203"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature complement(order(220007..220009,220013..220018,
220028..220033))
/locus_tag="Caci_0203"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature complement(219869..219877)
/locus_tag="Caci_0203"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature complement(219578..219757)
/locus_tag="Caci_0203"
/note="C-terminal DNA-binding domain of LuxR-like
proteins. This domain contains a helix-turn-helix motif
and binds DNA. Proteins belonging to this group are
response regulators; some act as transcriptional
activators, others as transcriptional repressors. Many...;
Region: LuxR_C_like; cd06170"
/db_xref="CDD:99777"
misc_feature complement(order(219596..219598,219647..219661,
219665..219670,219674..219679,219701..219709,
219746..219754))
/locus_tag="Caci_0203"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:99777"
misc_feature complement(order(219581..219583,219590..219598,
219707..219709,219713..219715,219719..219721))
/locus_tag="Caci_0203"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:99777"
gene complement(220680..222020)
/locus_tag="Caci_0204"
/db_xref="GeneID:8331530"
CDS complement(220680..222020)
/locus_tag="Caci_0204"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
histidine kinase dimerisation and phosphoacceptor region;
SMART: ATP-binding region ATPase domain protein;
KEGG: fal:FRAAL5519 two-component system sensor kinase"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_003111000.1"
/db_xref="GI:256389436"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR011712"
/db_xref="GeneID:8331530"
/translation="MGGGPKIGEAFPMKRFLLSPVSGRTARQYLFALVSAPLGLAGFV
YAVVTLAVGGALSFTFVGLPLIALAIHLARQYAKLQRRMARGLLGVDIEAPPPNLRRQ
NAHGLLAKLGAALGDLPAWRSQLYLLVRFPLGIAYFVTLGVGVVEGLVMLTYPIWWAV
FRPTNTDSHGVKHQSALQFGDGFYFDNWLRALLLTVAGVVWIYAAVWILKFLLWLDSL
LMKALLGPTNSERRVEELTVSRAHAVDDSAARLRRIERDLHDGAQAQLVALAMQLGEA
KENLDAGGNGAELDLTETRTLIDTAHRNAKQAINELRDLARGIHPAALDTGLRDALGT
LAARSAMPVTVNVALAERPDRAIETIAYFCAAELLTNAAKHAAPTRAALSVVQEEGQL
HLTVEDDGRGGAQVGYGGGLAGLLDRVRTVEGSLAVDSPQGGPTRVFVKLPMHV"
misc_feature complement(221349..221930)
/locus_tag="Caci_0204"
/note="Putative sensor; Region: Sensor; pfam13796"
/db_xref="CDD:222385"
misc_feature complement(220692..>221450)
/locus_tag="Caci_0204"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: COG4585"
/db_xref="CDD:226951"
misc_feature complement(221061..221267)
/locus_tag="Caci_0204"
/note="Histidine kinase; Region: HisKA_3; pfam07730"
/db_xref="CDD:219540"
gene complement(222165..222395)
/locus_tag="Caci_0205"
/db_xref="GeneID:8331531"
CDS complement(222165..222395)
/locus_tag="Caci_0205"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111001.1"
/db_xref="GI:256389437"
/db_xref="GeneID:8331531"
/translation="MNVSATVKVRVTVDADKWAAASGVESVQASASLAAALSEALERF
SDLVPEVDQAGGETRVEKLTWTASTTDPALPS"
gene 222455..224104
/locus_tag="Caci_0206"
/db_xref="GeneID:8331532"
CDS 222455..224104
/locus_tag="Caci_0206"
/inference="protein motif:PFAM:PF00501"
/note="activates fatty acids by binding to coenzyme A"
/codon_start=1
/transl_table=11
/product="acyl-CoA synthetase"
/protein_id="YP_003111002.1"
/db_xref="GI:256389438"
/db_xref="InterPro:IPR000873"
/db_xref="GeneID:8331532"
/translation="MPTVAELIGVQSQHTGPGLLGPNGLRYQHPEIAAHAASRAALFG
ERHRPGMRPHIGVLLGNTDEFVFWLSAAALAGAALVGVNPTRRGAELARDIRHAECEL
LVTDREHLPLLADLGLDALPLLIVDDPAYREALQPFAGVSATDVKPIAPITEDTRLLL
YFTSGSTGAPKAVTCVQGRVAASGAVMAERFGLIASDVCYIPMPMFHGNAILANWGPA
LVAGATVALRDRFSASGFLSDVREYQATYFTYVGRAISYILATPEHPEDAANPLRAGF
GTEAGPRDRERFEQRFGCHLSEGYGASEGGINIVAPRTFPPSVLARGAVVGKTNPTLS
ILNLETGAPCPPAEFDAAGRLLNGAEAIGELVGTGPGGFTGYWNNPAADAERFADGRY
RSGDLFYADTDGWLYFAARKADRMRVDGENISVALLEAILARWEPVEAVAAYAVPDEV
TGDAVMCALVLRQGSDFDPGAFADFLAAQADLGTKMAPRFVRVTAALATTATEKVSRY
AMREQGWWDVGEDAVWARTGRQGAYQPRDTGSVNRNSAPPP"
misc_feature 222455..224101
/locus_tag="Caci_0206"
/note="acyl-CoA synthetase; Provisional; Region: PRK13388"
/db_xref="CDD:237374"
misc_feature 222524..223999
/locus_tag="Caci_0206"
/note="Adenylate forming domain, Class I; Region:
AFD_class_I; cl17068"
/db_xref="CDD:247692"
misc_feature order(222932..222934,222941..222958,222962..222967)
/locus_tag="Caci_0206"
/note="acyl-activating enzyme (AAE) consensus motif; other
site"
/db_xref="CDD:213270"
misc_feature order(222941..222943,223286..223291,223346..223363,
223640..223642,223676..223678,223685..223687,
223718..223720,223964..223966)
/locus_tag="Caci_0206"
/note="AMP binding site [chemical binding]; other site"
/db_xref="CDD:213270"
misc_feature order(222941..222943,223061..223066,223232..223234,
223238..223243,223250..223252,223286..223291,
223346..223363,223640..223642,223676..223678,
223685..223687,223709..223720,223907..223909)
/locus_tag="Caci_0206"
/note="active site"
/db_xref="CDD:213270"
misc_feature order(223061..223063,223238..223243,223250..223252,
223286..223288,223709..223717,223880..223882,
223907..223909)
/locus_tag="Caci_0206"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:213270"
gene complement(224053..225753)
/locus_tag="Caci_0207"
/db_xref="GeneID:8331533"
CDS complement(224053..225753)
/locus_tag="Caci_0207"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
histidine kinase A domain protein; histidine kinase HAMP
region domain protein;
SMART: ATP-binding region ATPase domain protein; histidine
kinase HAMP region domain protein; histidine kinase A
domain protein;
KEGG: sen:SACE_5293 two-component system sensor kinase"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_003111003.1"
/db_xref="GI:256389439"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003660"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="GeneID:8331533"
/translation="MIRGRFGRRTRLVAADQGFSAGAGTDAGAGASAGVAADASAGPN
APFSTAPAFSAAPPTTQGSETYPARPNGQTAQSAPSALSRLGSPLSFWRRTPLRARLA
LAATVAVAAGIGGGVGFAYVAVRHSLTQQVDSGLQRQGAKVQDLLLTHHLPRYDETRS
QQFGDTLTNSQFIDSTGTPLQPKLLPATLRTPYSVVVLAPASTRVIPISSADAQVAAG
SMNSYMHSGEMNGQHVRILTLSIGQKDRALQIDAPLTAMDQQLSTLGWELFGAGAAGI
VLAAGLGWLVTRTALRPVAELTSTAERIAATHDLAHRIPIDGAPGEPRDELGRLAATF
NTMLDAVQEATDRQRQLVADASHELRTPLTSLRTNVEVLAHAQRLEPEDRQALVSGIM
SGLDDMTMLVSDTVELARGEEQAALFEELRFDLLVRRCVDRAAMHWPKAVFKEDLEDC
LVVGVTDRLAKAVRNLLDNAAKFSPDGGLVEVRTAPGADGTVTLTVRDHGPGIPEADL
PHVFDRFYRAASARDLPGSGLGLAIVAQVAVGHGGGVTVAGAQGGGAEFRLTLPVSRG
"
misc_feature complement(224059..224898)
/locus_tag="Caci_0207"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:223715"
misc_feature complement(224725..224883)
/locus_tag="Caci_0207"
/note="Histidine kinase, Adenylyl cyclase,
Methyl-accepting protein, and Phosphatase (HAMP) domain.
HAMP is a signaling domain which occurs in a wide variety
of signaling proteins, many of which are bacterial. The
HAMP domain consists of two alpha helices...; Region:
HAMP; cd06225"
/db_xref="CDD:100122"
misc_feature complement(order(224731..224736,224743..224748,
224752..224757,224764..224769,224773..224778,
224842..224844,224848..224853,224860..224865,
224869..224874,224881..224883))
/locus_tag="Caci_0207"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100122"
misc_feature complement(224524..224718)
/locus_tag="Caci_0207"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(224539..224541,224551..224553,
224560..224562,224572..224574,224581..224583,
224593..224595,224647..224649,224656..224658,
224668..224670,224677..224679,224689..224691,
224701..224703))
/locus_tag="Caci_0207"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(224683..224685)
/locus_tag="Caci_0207"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(224071..224379)
/locus_tag="Caci_0207"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature complement(order(224083..224085,224089..224094,
224107..224109,224113..224115,224161..224172,
224245..224250,224254..224256,224260..224262,
224266..224268,224338..224340,224347..224349,
224359..224361))
/locus_tag="Caci_0207"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(224347..224349)
/locus_tag="Caci_0207"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature complement(order(224164..224166,224170..224172,
224248..224250,224254..224256))
/locus_tag="Caci_0207"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene complement(225750..226466)
/locus_tag="Caci_0208"
/db_xref="GeneID:8331534"
CDS complement(225750..226466)
/locus_tag="Caci_0208"
/inference="protein motif:PFAM:PF00072"
/note="PFAM: response regulator receiver; transcriptional
regulator domain protein;
SMART: response regulator receiver;
KEGG: fre:Franean1_5311 two component transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="two component transcriptional regulator"
/protein_id="YP_003111004.1"
/db_xref="GI:256389440"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="GeneID:8331534"
/translation="MDTRGSLDREPRSLLVVDDDTEIRDAIARAFRLQGYRVRTASGG
LAALEQVAADPPDAIVLDVMMPELDGVEVCRRLRGVGDHTPVLLLTARDAVGDRVAGL
DAGADDYLVKPFALAELHARMRALLRRSEYDPVPESERLVFEDLELDPESRLAYRGGR
TIELTRTEFALLELLMRNAGRVLPREVISDRIWGYELGPESNSLEVFVSCIRRKTEGG
GEPRLVQTVRGFGYTLRVPA"
misc_feature complement(225753..226427)
/locus_tag="Caci_0208"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:223816"
misc_feature complement(226086..226424)
/locus_tag="Caci_0208"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:238088"
misc_feature complement(order(226128..226133,226140..226142,
226197..226199,226257..226259,226281..226283,
226410..226415))
/locus_tag="Caci_0208"
/note="active site"
/db_xref="CDD:238088"
misc_feature complement(226281..226283)
/locus_tag="Caci_0208"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238088"
misc_feature complement(order(226257..226265,226269..226274))
/locus_tag="Caci_0208"
/note="intermolecular recognition site; other site"
/db_xref="CDD:238088"
misc_feature complement(226125..226133)
/locus_tag="Caci_0208"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238088"
misc_feature complement(225765..226046)
/locus_tag="Caci_0208"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:238225"
misc_feature complement(order(225774..225776,225789..225791,
225822..225827,225849..225851,225858..225860,
225912..225917,225972..225974))
/locus_tag="Caci_0208"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238225"
gene complement(226478..227143)
/locus_tag="Caci_0209"
/db_xref="GeneID:8331535"
CDS complement(226478..227143)
/locus_tag="Caci_0209"
/inference="similar to AA sequence:KEGG:Acel_1453"
/note="KEGG: ace:Acel_1453 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111005.1"
/db_xref="GI:256389441"
/db_xref="GeneID:8331535"
/translation="MSDKPGGPAANDNNAEFELLSQAPSAPDISGQLKPARSGGAGIP
KVTLGLVGAVLLAGGFVGGIAVGKSNSSSSSKPSNTAAGANRARGGYGGGFGTGGATG
GAAGGTAGGATGGAAGGARGGAVTGTVTAVSGSTITVTDSTGKAVTVNTSPQTTVTIG
KSGAVSDLTTGSEVTILGTPDSSGTITARSVVSGITQFGFGGRGGNRTPGAASSSPGG
SNG"
gene complement(227177..228406)
/locus_tag="Caci_0210"
/db_xref="GeneID:8331536"
CDS complement(227177..228406)
/locus_tag="Caci_0210"
/inference="protein motif:PFAM:PF02687"
/note="PFAM: protein of unknown function DUF214;
KEGG: saq:Sare_0223 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111006.1"
/db_xref="GI:256389442"
/db_xref="InterPro:IPR003838"
/db_xref="GeneID:8331536"
/translation="MRFREVFRFAFAGLKANKLRSGLTTLGILIGVGAVILLVAVGKG
SGAQVQANIDKLGTNLLEVSRQAGGFGARASRNTGTQSSVSALTLADAQSLVDPVNAP
DVLTEAPVVTASPTATYSGATHQISQLVGTYPAYLQATNWQIAEGSSITDDDVTQARK
VIVIGQTVATDLFGTADPVGQQVMINNVPYSVEGVLQSKGSSGLQDADDFAIAPLTTV
QDSLSGFGSLSQIVVQAKSAGATTAAQNEITSILTSRHHLSATASPDFRVLNQQSLLA
TSSSTTHTFTVLLGAVAAISLLVGGIGITNIMLVTVTERTREIGIRKALGAPRAAILG
QFLIEAVMLSLIGGALGVAAGLIGTRFTVAGVKPVIVPASIALAFAVSALIGLFFGSF
PANRAAKLHPIQALRHE"
misc_feature complement(227654..228379)
/locus_tag="Caci_0210"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:221725"
misc_feature complement(227180..228277)
/locus_tag="Caci_0210"
/note="ABC-type antimicrobial peptide transport system,
permease component [Defense mechanisms]; Region: SalY;
COG0577"
/db_xref="CDD:223650"
misc_feature complement(227201..227536)
/locus_tag="Caci_0210"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:217187"
gene complement(228406..229176)
/locus_tag="Caci_0211"
/db_xref="GeneID:8331537"
CDS complement(228406..229176)
/locus_tag="Caci_0211"
/inference="protein motif:PFAM:PF00005"
/note="PFAM: ABC transporter;
SMART: ATPase AAA;
KEGG: saq:Sare_0222 ABC transporter"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_003111007.1"
/db_xref="GI:256389443"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8331537"
/translation="MTGVSGPGGSEGRKPVIELADIRKTYGMDGTAVHALRGVTLTVP
AGDYVAIMGASGSGKSTMMNIIGCLDVPTSGRYLLDGIEVEHLSDRQLALVRNRKIGF
VFQSFNLLPRTTALDNVELPLIYAGVGTAERRKRARAALELVGLGDRMNHKPQELSGG
QQQRVAVARALVTAPSLILADEPTGNLDSASSEDVMALFDRLHQAGRTIVLITHEHDI
AEHADRAIRLMDGQIVSDERNGARGWLSAQHSAKHGSA"
misc_feature complement(228460..229131)
/locus_tag="Caci_0211"
/note="ABC-type antimicrobial peptide transport system,
ATPase component [Defense mechanisms]; Region: SalX;
COG1136"
/db_xref="CDD:224059"
misc_feature complement(228478..229128)
/locus_tag="Caci_0211"
/note="ATP-binding cassette domain of the transporters
involved in export of lipoprotein and macrolide, and cell
division protein; Region: ABC_MJ0796_LolCDE_FtsE; cd03255"
/db_xref="CDD:213222"
misc_feature complement(228997..229020)
/locus_tag="Caci_0211"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213222"
misc_feature complement(order(228535..228537,228631..228636,
228862..228864,228994..229002,229006..229011))
/locus_tag="Caci_0211"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213222"
misc_feature complement(228862..228873)
/locus_tag="Caci_0211"
/note="Q-loop/lid; other site"
/db_xref="CDD:213222"
misc_feature complement(228679..228708)
/locus_tag="Caci_0211"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213222"
misc_feature complement(228631..228648)
/locus_tag="Caci_0211"
/note="Walker B; other site"
/db_xref="CDD:213222"
misc_feature complement(228613..228624)
/locus_tag="Caci_0211"
/note="D-loop; other site"
/db_xref="CDD:213222"
misc_feature complement(228529..228549)
/locus_tag="Caci_0211"
/note="H-loop/switch region; other site"
/db_xref="CDD:213222"
gene complement(229173..230783)
/locus_tag="Caci_0212"
/db_xref="GeneID:8331538"
CDS complement(229173..230783)
/locus_tag="Caci_0212"
/inference="protein motif:PFAM:PF00529"
/note="PFAM: secretion protein HlyD;
KEGG: ace:Acel_1450 RND family efflux transporter MFP
subunit"
/codon_start=1
/transl_table=11
/product="secretion protein HlyD"
/protein_id="YP_003111008.1"
/db_xref="GI:256389444"
/db_xref="InterPro:IPR003997"
/db_xref="InterPro:IPR006143"
/db_xref="InterPro:IPR008265"
/db_xref="GeneID:8331538"
/translation="MTDSPRLPKGVWINTSLAVVVAAGGAGAWALLGSSSSDKTAANG
RTIAVQRGNVTAQVSASGNVTLPTEQDLAFTASGTVTEVDVKPGDVVKAGQVLAKIDT
TEANQQLTSAQAQLTTAQAQLTKLQQGQTPQQAALSRQQLTNAADSLSSAKTSYSDAR
NSISLDESNLAAAVTTAKNNLAADEAAAKPDAAKIAQDTNAVTQAENAQKNGSLKDTQ
SLHQAQNSLTSAQNSYAIAVDQQAVSAAPATPDQIASANQSVLNAQNAVTTAQKGVAG
TVITAPQAGTVLSVGGLVGDSVSAGSASSTSAASSSSGGSTGGSSGGSASGSSGSSSS
STSSTAAKSGSSFVVLGNMSSLTVRAEFAETDAAKLKPGESAQVTINAIPGSALTATV
QSVDPTSTVVSNVVEYGVTLQFTAGQQDLASLKPGQTASVSVTTDSVTNVLYVPSSSV
TTLAGQSFVTIVSGKTQTQTPVQIGVVGDTSTEITSGVSEGDEVLLSSRTTTGTGTTT
RGGGAGGFGGGAGGFGGGAAGGRGGFGG"
sig_peptide complement(230691..230783)
/locus_tag="Caci_0212"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.864) with cleavage site probability 0.536 at
residue 31"
misc_feature complement(230484..>230579)
/locus_tag="Caci_0212"
/note="Biotinyl_lipoyl_domains are present in
biotin-dependent carboxylases/decarboxylases, the
dihydrolipoyl acyltransferase component (E2) of 2-oxo acid
dehydrogenases, and the H-protein of the glycine cleavage
system (GCS). These domains transport CO2, acyl; Region:
Biotinyl_lipoyl_domains; cl11404"
/db_xref="CDD:245604"
misc_feature complement(229503..>229730)
/locus_tag="Caci_0212"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:222128"
gene 230930..231601
/locus_tag="Caci_0213"
/db_xref="GeneID:8331539"
CDS 230930..231601
/locus_tag="Caci_0213"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: cau:Caur_0266 phosphate binding protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111009.1"
/db_xref="GI:256389445"
/db_xref="GeneID:8331539"
/translation="MPKIDWTPGQGKRGRPLRRVLGMGQQQGLLVMYGLAAIAVVLAL
AAACGAFDGSGPQPSAQTAGESTNPDDPAGAPSIPKDSTKSTQILLGSVQHYADLLAS
GQKIVGTTHYPDMAAYAQAFADASSPAARFSKFRTSPNPESDTTYLNAERQAAAAYGG
DHGSRLDAWLRDMAKVKSDLGDWVATAAQYQQGAANQAVLDAAASTVNQDLATARDAA
NSLSH"
gene complement(231644..232222)
/locus_tag="Caci_0214"
/db_xref="GeneID:8331540"
CDS complement(231644..232222)
/locus_tag="Caci_0214"
/inference="protein motif:PFAM:PF00578"
/note="PFAM: alkyl hydroperoxide reductase/ thiol specific
antioxidant/ Mal allergen; redoxin;
KEGG: mab:MAB_2246 thiol-specific antioxidant related
protein/peroxidoxin BcpB"
/codon_start=1
/transl_table=11
/product="alkyl hydroperoxide reductase/ thiol specific
antioxidant/ Mal allergen"
/protein_id="YP_003111010.1"
/db_xref="GI:256389446"
/db_xref="InterPro:IPR000866"
/db_xref="InterPro:IPR013740"
/db_xref="GeneID:8331540"
/translation="MHDIYTLPADLPIPQDDGAADHLPGARVPELTLTSTAGEAIALA
ALGEGRTVLYIYPLSGRPGEEAPEGWSAIPGARGCTTEACDFRDHHKELLEAGAARVF
GLSSQDSAYQQELVERLRLPFAMLSDTGLRLAAELDLPTFEAGGRLLYKRITLVIRDG
VIEHAFYPIFPPDRHAGEVLGWLTKNPVRRIP"
misc_feature complement(231683..232147)
/locus_tag="Caci_0214"
/note="Peroxiredoxin (PRX) family, Bacterioferritin
comigratory protein (BCP) subfamily; composed of
thioredoxin-dependent thiol peroxidases, widely expressed
in pathogenic bacteria, that protect cells against
toxicity from reactive oxygen species by reducing...;
Region: PRX_BCP; cd03017"
/db_xref="CDD:239315"
misc_feature complement(order(231767..231769,231986..231988,
232040..232042))
/locus_tag="Caci_0214"
/note="catalytic triad [active]"
/db_xref="CDD:239315"
gene complement(232341..233099)
/locus_tag="Caci_0215"
/db_xref="GeneID:8331541"
CDS complement(232341..233099)
/locus_tag="Caci_0215"
/inference="protein motif:PFAM:PF00753"
/note="PFAM: beta-lactamase;
KEGG: sco:SCO7301 hypothetical protein"
/codon_start=1
/transl_table=11
/product="beta-lactamase domain-containing protein"
/protein_id="YP_003111011.1"
/db_xref="GI:256389447"
/db_xref="InterPro:IPR001279"
/db_xref="GeneID:8331541"
/translation="MVKAFRPDDVVRVDGDVHAVLGSDVTWVVVKDGDAATLIDTGYP
QDYDNLLASLALLGVAPESLSAILITHAHNDHIGGAERLRSTYGIPVLTHAEEVPHAR
RDFLDQVSIGKVAANAWRPGVVPWALRALRSGGTADVPVAEPQAFPADGPLDLPGAPI
PLHTPGHTEGHCAYLLPAAGILVCGDALGTGHPTSRISGPQMLPTMFQKDRARALASL
SVFEGIDADVLVPGHGPVHRGAMRDVVQRVRERG"
misc_feature complement(232401..233024)
/locus_tag="Caci_0215"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; smart00849"
/db_xref="CDD:214854"
gene complement(233220..235211)
/locus_tag="Caci_0216"
/db_xref="GeneID:8331542"
CDS complement(233220..235211)
/locus_tag="Caci_0216"
/inference="similar to AA sequence:KEGG:Acel_1461"
/note="KEGG: ace:Acel_1461 cell wall binding repeat 2-
containing protein"
/codon_start=1
/transl_table=11
/product="cell wall binding repeat 2-containing protein"
/protein_id="YP_003111012.1"
/db_xref="GI:256389448"
/db_xref="GeneID:8331542"
/translation="MSSPRIRSTAGSLAAAALLTLGATAYAPQASATGLPHHAARNGP
ITWAMNGPGVTGVDPVTGASIPGALVPALSSLNGTLSDLAWSPDGTKIAAVLTHGSNQ
QRALIAYSLIDQTVTTVEDGIPMLADPSWTADGSTILFAAAGGAQRNGLEVLWAISPV
AGAVEHRLLPNEPNCQEIEPSAGPGGAVVFTRTPYLTCDGGNGIGYSVNGHTTVIGQA
QDFHPALSPDGRTIVYCHQDVATGYYQLYRSAIVNGVPQPGTPLPGSPTMVTGDLVFS
PDGSAVAFHVFTGTGPQLATMPVAGGNPVYLSWPGASTGRLSWQPLFDKDVVRLYGDS
RLATAVSASRYTWADNGTADPARKQAKAAVISRSDNYADALGGAVLAARAGGPLLLTP
TGTLDPAVRAELDRILPAGAPVYVLGGGAAVSQTVENQLAGRYTVRREAGADRFATAV
AVARASLALTPPSAGRVHVLAATGLNYPDALSAGAAAGALGTGVVVLTSDGQLPEVTR
RFLADPTGTGAAVDVDTIGGQAGSAIPDTSDVRLPAGSIVSAYSGTDRYETSYRVASV
LLGDRQPTTAGIVTAANWPDALAGGALLGVLRGPLLLYPSVPTSPTSLTDKWLRSNAA
TLRSVLILGGPSALAPSTQRLIQGDIAAPGRSVYTENPY"
sig_peptide complement(235113..235211)
/locus_tag="Caci_0216"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.655 at
residue 33"
misc_feature complement(<234771..>234962)
/locus_tag="Caci_0216"
/note="translocation protein TolB; Provisional; Region:
tolB; PRK00178"
/db_xref="CDD:166839"
misc_feature complement(<234249..>234551)
/locus_tag="Caci_0216"
/note="translocation protein TolB; Provisional; Region:
tolB; PRK05137"
/db_xref="CDD:235351"
gene complement(235340..237394)
/locus_tag="Caci_0217"
/db_xref="GeneID:8331543"
CDS complement(235340..237394)
/locus_tag="Caci_0217"
/inference="protein motif:PFAM:PF04122"
/note="PFAM: cell wall binding repeat 2- containing
protein;
KEGG: ace:Acel_1679 protease-like"
/codon_start=1
/transl_table=11
/product="cell wall binding repeat 2-containing protein"
/protein_id="YP_003111013.1"
/db_xref="GI:256389449"
/db_xref="InterPro:IPR000601"
/db_xref="InterPro:IPR007253"
/db_xref="GeneID:8331543"
/translation="MSCPVLCLVVSLKDVSVPKPRAIRLATLAITGAALLVAGAAPAL
AAGPGGRFGVSASASSAPAMSLSFGFYAGTSHAAAVLYAFNVDPAKEATTTYRIDWGD
GSTPWVQTGGTVPNGLVISHDYPHAGVWKATATVDDGTSTVGQNTTYTAHYPTTPTTP
GSAFTPVGGNAPLAGDLSIDGGTVDAAATKSYIVNWGDGSPSQTVAAADSGPTVVHHV
FTAPRSYGVSVVTTDGIDSSAPPLYPTAVSAWGLAFSSTVNTTAFATVTVTSSAGKSL
PTYSDYYMFSVNWGDGTTSPATQSEDMTHQYKTGGPYAVTVTMAPTMDADKSPAYTWT
AGTTLVVPTPPPPAPPAVGTRLVQRLGGLDRIGTGITVSRSGWSSWQNRFPYGGQLPA
GAVVLARSDGFSDALAGVPLAAHVNGPLLLTGGSALDLTVEHEITRVLQPHAGKTVYL
LGGTAALSPAVQQRLVQLGYTVQRYSGLDRFGTALDIARRGLNDPAKIVVATGMDYPD
ALAAGPYASSVLGTSGHEAAVVLSQGGTLDPATAGYISSRLNSSSAQAPTVVTVGGAA
GHAVDAAFPALAGHELKLQGQNRYQTANAVASQFTSASRVGVATGTGYADALTGGALA
AARHFPIVLTTPAGLDPAGREAIARFWSQLSGAYLFGGTTALSDQVLRDVDAVVNATA
QP"
sig_peptide complement(237257..237394)
/locus_tag="Caci_0217"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.993) with cleavage site probability 0.989 at
residue 46"
misc_feature complement(236003..236323)
/locus_tag="Caci_0217"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
misc_feature complement(<235751..235978)
/locus_tag="Caci_0217"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
gene 237642..240188
/locus_tag="Caci_0218"
/db_xref="GeneID:8331544"
CDS 237642..240188
/locus_tag="Caci_0218"
/inference="protein motif:PFAM:PF00801"
/note="PFAM: PKD domain containing protein;
SMART: PKD domain containing protein;
KEGG: ace:Acel_1679 protease-like"
/codon_start=1
/transl_table=11
/product="PKD domain-containing protein"
/protein_id="YP_003111014.1"
/db_xref="GI:256389450"
/db_xref="InterPro:IPR000601"
/db_xref="InterPro:IPR006162"
/db_xref="GeneID:8331544"
/translation="MPFLAANARADTVAATVFVGSTSGAPCSDTAAAAGSAATPFCAI
QPAIDSPLTGPGTTVLVAAGAAYLGQVNLDKSGTSADPIVLRSASPAQGSRAVIRGTV
SVNGAHDVTVDGFDIYADTFGVNIEASSDVVVTRDHIEGPHDSSVADSGIMIAMASSA
VTVSTDFVRGFGGGGLFADSVSGLNIVADTITRNTTPSAGLDSIEVTGTSSGVAVADD
IIDAAPSLPAGSAVDYNVIDAGAVGPHDITGDGLAGSTDGDITPGDTSPAIDSAEEAA
TGELPTDMFGNAAADDPLVPNAGTGSRVRDRGAVERTHGDTSYVLTLTPASGDAPLAV
TATVTEHVGWAQQPRAAFYSFGFGGTEQPATANPTARHTYTTPLYGGDVSVTIYDSAH
EAIGYTTALVNVGQPVHATLSVAAASGLNVNAVGSVQGGVGDWSIDFGDGYSTNFYSQ
TQATANHSYAKPGTYKVTLTANGILPSNAAKLTQQVTVTAPPAPPPIVDTDPLVHRIA
GSDRYATSIVASQVRWSAANSVDGAPAEDQAQAVVLARGDAFPDALAGVPLAAYKHGP
LLLTDPKTVSQATLEEIRRVLPAGGNHTIYILGGKTAVSPSVEAELRGLGYNVVRYGG
TDRYGTALLIAHLGLGDPRHLIIAIGGDFADALAAGPFAADSAEVVDGKPAAILLSGK
ANGNDTITDAGTAAYIDAKVQSNGGLSHCTDPNLITAVGGPALTAFLNQEHKATKYAC
VDGIVGADRYATSSQLAGQWTNPEHPGVAVGTTFPDALSGGAYEASLGQPLLLTNPTS
LPSSTATALASMYPPHENTRTRSVVIFGGTSAVSSAVENQIIAKVHGRAQ"
misc_feature 238899..239057
/locus_tag="Caci_0218"
/note="polycystic kidney disease I (PKD) domain; similar
to other cell-surface modules, with an IG-like fold;
domain probably functions as a ligand binding site in
protein-protein or protein-carbohydrate interactions; a
single instance of the repeat is...; Region: PKD; cd00146"
/db_xref="CDD:238084"
misc_feature 239154..239474
/locus_tag="Caci_0218"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
misc_feature 239871..240155
/locus_tag="Caci_0218"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
gene complement(240596..240930)
/locus_tag="Caci_0219"
/pseudo
/db_xref="GeneID:8331545"
gene 241186..241251
/locus_tag="Caci_0220"
/pseudo
/db_xref="GeneID:8331546"
gene complement(241285..242544)
/locus_tag="Caci_0221"
/db_xref="GeneID:8331547"
CDS complement(241285..242544)
/locus_tag="Caci_0221"
/inference="protein motif:PFAM:PF00872"
/note="PFAM: transposase mutator type;
KEGG: sma:SAV_347 IS256 family transposase"
/codon_start=1
/transl_table=11
/product="transposase mutator type"
/protein_id="YP_003111015.1"
/db_xref="GI:256389451"
/db_xref="InterPro:IPR001207"
/db_xref="GeneID:8331547"
/translation="MILKEEDPMTALTSVPAGDDFERQLAAAEPDVLRAMVKSFAEAL
MSAEADAACGAPYGQVSADRTNSRNGYRTRAWDTRVGSIELAVPKLRTGSYFPEWLLE
RRRRAEQALMSVVATAYLLGVSTRRVERLAAELGVTQLSKSQVSAMAKHLDEQVAAFR
NRPLDAGPYPVLWIDALTQKVRENGRVVNVHALVAVGVNGDGGREILGIDVASAEDGA
GWLAFLRSLTARGLAGVQLVISDAHRGLVESIGAAIGGATWQRCRTHYARNLMNQVPK
TAQPWVATLLRTIFEQPDAEAVHAQAGQVIAALEAKFPKAAAHLDEARADLLAFTAFP
HEIWRQIWSNNPQERLNKEIRRRTDVVGIFPDRASVIRLVGAVLAEQNDEWAEGRRYM
GLEILAKIQRTGQGPAPDTAPAAALIA"
misc_feature complement(241381..242490)
/locus_tag="Caci_0221"
/note="Transposase, Mutator family; Region:
Transposase_mut; pfam00872"
/db_xref="CDD:216166"
misc_feature complement(241732..241944)
/locus_tag="Caci_0221"
/note="MULE transposase domain; Region: MULE; pfam10551"
/db_xref="CDD:220806"
gene complement(242678..244198)
/locus_tag="Caci_0222"
/db_xref="GeneID:8331548"
CDS complement(242678..244198)
/locus_tag="Caci_0222"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: cms:CMS_1496 large integral membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111016.1"
/db_xref="GI:256389452"
/db_xref="GeneID:8331548"
/translation="MTHFQSATPPTASGSHSTPPTPGWLSVGAERADPQDCSEGGCVG
DYSAPTDLFCRKHDRFLPLSSRLPSRRKTIAINLSRLVVLGGFEYSAQYATNVPLVVL
GAVLGGLLLVLPLRRFPHTYAAAVRAWAVGGLVCGLAAIPDVTLHRVLGTAVLVIVLG
GATLYLGRLASLIGVGDPRIPDQIAPRRAARQHAGRQAALGTPGRVAGLVVGPAVASP
AAILTLLALGQGPAQWLFRAPSAIQVFLVTTAIGGPVATLFIAAVAGFLEGAPKVDRQ
VAPKFPEPFAPPRFVLDTVPDGSLGRVASRTVEITVNAVRRAAHVLATSTVRTANWMH
RHAVIIGRKVAATAQCALGILRNAAVIAGYAAMCAVRIVVLPAVGIGAAYALLVPSGS
ALTRYLLSGGFADLGLGIAGAIALAASVMLVWMLLSGLSRDRVLDSATHNVEDLWARV
MVLIATGGLALGTLGSLGYGKIHIGFVTLSVDAVVAFTVLKGYARTSIPWRRNVTK"
gene complement(244269..246128)
/locus_tag="Caci_0223"
/db_xref="GeneID:8331549"
CDS complement(244269..246128)
/locus_tag="Caci_0223"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111017.1"
/db_xref="GI:256389453"
/db_xref="GeneID:8331549"
/translation="MNQASVHSVLDQLARLGPLRVAFLSGAGVSVEMPTGLPSGAALT
RRVCEAFFPERTFDTLLDYHAAVGWTITEVCAAQRARAGGIAPKGRLPRLETVLGVAM
RVLDHDERRVLRILDDVRTAVPNRQHAALAAHLAVGGRQLTLNFDDCIEQRLITLEAP
PDAADRLIHLHSSFRADPEGRSLGLTLARIEPGFQKPVEHSLTSTLAAAAAIVVVGYS
GSDFFDVDQTVAALPSGSLKGTRLYWINHGSHPRWHVIDAANPALPPVIAGLARAGAR
PTVLCGRTGEFLSSLLDAWRLNSGPEPAVSAGPPAPPPTVPVSENERREAALALYREL
AIPRAVAGILDSGNLAGLPSDAVWLARSELLWEQGRWNDLLHQWLRRTPEGIDPLVRA
ERVGACLWVQGRLVPAYLWLVAHRRAAAVDPDGARRLAETEGRVVEHMARTPELRPIA
RCLAPQAVGRIRALGGLEQQAGVHAFRRRQDLTSSLDAIGGGGVREAGHAAASQNWFA
EAGSLTAALSYRHRQLRDEFRPDRPDEELAADYRELADRFDIVGSAAGRVRTCLLPGA
ERVFGVREFVSALFDGQFGWWHRCRLLGHYLPSRVGHIARSALTIRQGRDPRL"
gene complement(246125..246994)
/locus_tag="Caci_0224"
/db_xref="GeneID:8331550"
CDS complement(246125..246994)
/locus_tag="Caci_0224"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111018.1"
/db_xref="GI:256389454"
/db_xref="GeneID:8331550"
/translation="MTGHRRSPAHDATQRDQLHTHSGHLARIGRDIRDGRGLEGYAVF
VTGLTMTVLGLTDAVSAPIMGAAQLLAISFLVFHSITPNRHRAVDVLAGREAFAPFPS
LLPHARDLRIYGPTAINVVVHLAEIRRLVLARGGMVRIVVQKPDPIQLRHTAVQLDQG
LDLDQTLTAAIRSLERCDGLPGFGYRLLPFNPGFSLVVVNAGDKDGYVIVEPHGFGDQ
AISDRMHLRITRSESPRWFAYWVDRFDAIWAASSDGEHASSGAKPGTDGETRSEGRLG
SLSQPDAEQGVAG"
gene 247117..249495
/locus_tag="Caci_0225"
/db_xref="GeneID:8331551"
CDS 247117..249495
/locus_tag="Caci_0225"
/inference="protein motif:PFAM:PF01381"
/note="PFAM: helix-turn-helix domain protein; NB-ARC
domain protein; hypothetical protein;
SMART: helix-turn-helix domain protein; hypothetical
protein;
KEGG: sen:SACE_0488 SARP family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_003111019.1"
/db_xref="GI:256389455"
/db_xref="InterPro:IPR001387"
/db_xref="InterPro:IPR002182"
/db_xref="InterPro:IPR013026"
/db_xref="InterPro:IPR013105"
/db_xref="GeneID:8331551"
/translation="MCGSAGTVGGDVDANREIAAQLKSWRERRHLSQANLADRINVSR
SHYTRLERGERPLHPVLADALDKALDTGGLFQNLREGSAADPSQHRSSDAASPGESSD
RGPFVPFPNTVHFTGRADEVQAVCQTLTGQLGHPRAAGICVISGMPGIGKTALARCVA
HLLADRFPDGCLCLDLQGFAPGVTPLTDFDALGLVLAMLGVPDEQIPAGRQARVVRYH
REIAGRRLLLLLDDAVCAQQISCLMPPTAGCSVLVTSRNRLTALDDAHRVVLPVLPPE
QAAELFCAVAEYRGGDQTSIDGILAACGGVPLALRIVAARCRPDSGLTPADLAARLAH
PRSRLTHLADNERAVSDAFGASLDLLPSAQRRLFLLLGLHPAKPLSGWAAAALADIPA
EQAERGLEELVGASLLEPRGHGRFRVHDLLAEFAASAVRRELPATEIWAATGRMLDAY
AVTAEAADRLLTPYRHRLSATEGAATGSPPQTFEDDEHARSWLTDHLDTLSALCVLAA
TDGWDERSWQLAYSLRGVFFLGRHWRLWRATHEAALPAAVRAGNRIGTGMTLANLGFV
LGETHDFEAAMTHLGAAVEVFRDIGDRHGEFTAQSHLAWIQHCTGDYREALAGQTAAL
EFRQAVGTPRNVAIIMRDMAATELALGKHGEARDHLQTAVAMFTELGLRLDLTMALNG
LGELAVHEGDTLQADVHHYAALNAARRSGSVFEQARAHAGLGRCAVRRGRPARARHQL
TRALRLYDTLGAGHVAAAVHAELAALDGAGISAARTRTPGTPSAPSAPGQTR"
misc_feature 247165..>247329
/locus_tag="Caci_0225"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:224314"
misc_feature 247171..247329
/locus_tag="Caci_0225"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:238045"
misc_feature order(247183..247185,247195..247197,247270..247272)
/locus_tag="Caci_0225"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238045"
misc_feature order(247192..247194,247267..247269)
/locus_tag="Caci_0225"
/note="salt bridge; other site"
/db_xref="CDD:238045"
misc_feature order(247213..247218,247249..247251,247258..247260,
247270..247275)
/locus_tag="Caci_0225"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
misc_feature 247468..248268
/locus_tag="Caci_0225"
/note="NB-ARC domain; Region: NB-ARC; pfam00931"
/db_xref="CDD:216202"
misc_feature 248782..249003
/locus_tag="Caci_0225"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature 248800..249111
/locus_tag="Caci_0225"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:238112"
misc_feature order(248800..248802,248809..248814,248917..248922,
248926..248931,248938..248943,249037..249042,
249049..249054,249061..249066)
/locus_tag="Caci_0225"
/note="binding surface"
/db_xref="CDD:238112"
misc_feature order(248806..248808,248842..248844,248854..248856,
248863..248865,248926..248928,248962..248964,
248992..248994,249001..249003,249046..249048,
249082..249084,249094..249096,249103..249105)
/locus_tag="Caci_0225"
/note="TPR motif; other site"
/db_xref="CDD:238112"
misc_feature 249013..249243
/locus_tag="Caci_0225"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature 249133..249357
/locus_tag="Caci_0225"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
gene 249492..250529
/locus_tag="Caci_0226"
/db_xref="GeneID:8331552"
CDS 249492..250529
/locus_tag="Caci_0226"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: hau:Haur_5148 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111020.1"
/db_xref="GI:256389456"
/db_xref="InterPro:IPR000157"
/db_xref="GeneID:8331552"
/translation="MSPQKTGVPPGEFDIFLSLGGPDRVEANLLKEALVKEGLTVFID
EDDIRHFDGITREIERCLRSSRALLAYYSREYPLRSACQFELTAALLAGRNEQDPTRR
IIVVNPEATEDHIQPAYISDARFAVRPGSDHERKALAALIKQKVDTLEGPLSSIAFTR
RPRWFAFRIAGAPGFVGRYRELWELDSLLTKAALPLTQDTPFGPVAVVTGAARVGKSS
LVADYAWQFGAAFRGGVYWIDMSGVEGTADQVLAAYADRVRSSAAIAGLDVAGLSRER
MFGVLGDHLAATAEPSLWIVDGLPAGLGEQAPHRMIIPAGDRVQTVFVGRRDPFGGAI
RAMVLGGLSRG"
misc_feature 249525..249860
/locus_tag="Caci_0226"
/note="TIR domain; Region: TIR_2; cl17458"
/db_xref="CDD:248012"
gene 250633..252387
/locus_tag="Caci_0227"
/db_xref="GeneID:8331553"
CDS 250633..252387
/locus_tag="Caci_0227"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sgr:SGR_5075 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111021.1"
/db_xref="GI:256389457"
/db_xref="GeneID:8331553"
/translation="MLAGGRLQDRQGLRSHAEVLADFDGVADIDRFFGVLVRESIGEL
DTARTLVLAVASVCAAAGIPAGLLVRAVATLANGAIDASAVGDALRGLQAAGLAANDD
GRWSISAVARELAREQNPPGPRRQYLRTVVADALTPMLQDAATSLGDRPGLVTHAVRL
CGEADRSEDARWLAILLERLAEHYEARGEAASSAVYRDRLLDIRGENTSDLFYAARAA
QAAREFDKAAGLAQRALSGAGSDEPQFRRCRLLLAEALDGALRFQEAETYWEHVAASA
GDRDAGESTGRAAESVAYARSRIRRGELRRAKQALKLLIEEYARSSGDVEFTTADAVG
GQIRGARIEYAHVLALIGDQIEARRVASELVAIYREAGLLRHADMVRAQEILAEAKLV
PHIRELRLDDTARARAEQDMKQLWQKNREEDGPRSPSALFAGVGYGHALVSQGRKEKA
RDMLVGLRADAIAVGGPRDPAYLRATFLLGQAYAQMRCYRKALKMFRYAYANQQEILG
PAHPYTLASGFELAVMYKTVGEDTEAAKLIREQDALSAKSMEYSNDLRAQIKVAGSLI
ALIPSPLWRWMRGPERDC"
gene 252889..255201
/locus_tag="Caci_0228"
/db_xref="GeneID:8331554"
CDS 252889..255201
/locus_tag="Caci_0228"
/inference="protein motif:PFAM:PF01381"
/note="PFAM: helix-turn-helix domain protein;
SMART: helix-turn-helix domain protein; hypothetical
protein;
KEGG: sen:SACE_0488 SARP family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_003111022.1"
/db_xref="GI:256389458"
/db_xref="InterPro:IPR001387"
/db_xref="InterPro:IPR013026"
/db_xref="GeneID:8331554"
/translation="MRPEWDRYAQRLKALRSEQGLSQRRLARALHVDHSVISRAESAV
RRPDPDLAASIDLLLSTGGELQRLARDAVRKQASADSLSTRGGPSGAVPRLRSSIPPD
SVHFTGRNAEFDQVRSELVERPDAVGAASVCVISALAGVGKTALAIHSAHRLAGRFPD
GCLFLDLRGFTPGHAPLSSFEALGALLALLDVPVATIHSTEPARSAQFQAETAGARLL
LVLDNAADAHQVRLLLPSAPGCRVLVTSRNRLVALDEAVHLDLRPLAEVDAAALFRMV
SAGGRVSQSTVDGIVARCAGVPLALRIAAARCAPGGAFDPELLAAELSRAEDFIGQLD
DGERSVRAVFDASFSLLPRELRQVLALLGTRLLTVFDIWDVAMLADLPLLGAAGALER
LHAASLLEVRGTDRFVLHDLVAEYAISAAGQTLGAEQLRAAIGRLLDAYLRVCDRADS
QVTPHRHRFPLAVAAAGAVPDPDFSDYYEALDWQTKHLDTAAALCETAYEHGFDEQCW
QLAYALRGVFFLTKHWEQWDRIQRIALAATRRLQDPHAECVTLNNLGLILGERGETDA
AHRCLNEAESVCRAARDRFGENTARAHRAWLFHTAGRHGESLTEHEGVLEFYTQIDSP
RNVAIVMRDMAASEAALGHTDSALAHLHAAEQAFRKLDLTMDLAMALNDLGETYTAII
DPKRAAEYFEAALAACAESGSDHERARAHAGLGALAESAGRQNWANAHYLQALRLFDA
LGAPAADVVRARLHASTVMFPTTAEEDENR"
misc_feature 252910..>253029
/locus_tag="Caci_0228"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:224314"
misc_feature 252913..>253053
/locus_tag="Caci_0228"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:238045"
misc_feature order(252925..252927,252937..252939,253012..253014)
/locus_tag="Caci_0228"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238045"
misc_feature order(252934..252936,253009..253011)
/locus_tag="Caci_0228"
/note="salt bridge; other site"
/db_xref="CDD:238045"
misc_feature order(252955..252960,252991..252993,253000..253002,
253012..253017)
/locus_tag="Caci_0228"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
misc_feature 253279..253710
/locus_tag="Caci_0228"
/note="NACHT domain; Region: NACHT; pfam05729"
/db_xref="CDD:218719"
gene complement(255268..258165)
/locus_tag="Caci_0229"
/db_xref="GeneID:8331555"
CDS complement(255268..258165)
/locus_tag="Caci_0229"
/inference="protein motif:SMART:SM00255"
/note="SMART: TIR protein;
KEGG: fre:Franean1_4251 tetratricopeptide TPR_4"
/codon_start=1
/transl_table=11
/product="TIR protein"
/protein_id="YP_003111023.1"
/db_xref="GI:256389459"
/db_xref="InterPro:IPR000157"
/db_xref="GeneID:8331555"
/translation="MTAPVRDGGENEAVYDVFFSYSWKNLAEALILVAALEARRLQVF
RDETGMRDFDDIGTEVFAALAGSRSFVALYTPQFPESAYCRLELAHAMTAAYRLDGDV
RRILPVVRELPYEAVRPRALQDKRLPARSTGPDALAAVVAERLEEIDDRPFGIASEPG
PPNWYPFPTVAEPAFHGRATELWDLHDALAGRDDAAQPGQRLARIVGMGGQGKTMLAE
QYARWFAADHPGGVFVLRGFGSHRNANSSPALLRTALEQQLARIAEELPGVPAEVEGR
SADRSARSVIRDHLERADQDYLWIVDDLPDHVGPIGVREFLAPTARGRTLVTSRHAHR
GFVGETVELGPLGESAAVRILLGGAGARADRATIASARRLAADLGHHAMAVALVARTL
DNNGTAELDQVRTELADPDRDALEWAAAREHEIATDHQGSVAAAMMRSLARLSSAAYE
VLLLASILAAAPVPAAMFDSVLGDSRRLDSTRPGMTVDDALRECAALALATVTVGTFG
TLWSVHSLVSRAVRFRDRFGSGDREQLRARSVEALGEILERGRDGIVDYLPHVRAVAG
GATDVAQQSLLNEAGRVQVGLGDERAALAMFERLYQACRESLGEDDFATQAGLVGLGV
AYGLLGQHELALDFKTRAYEVLARVEGADEEATLTALNNVAVTFGELGDYAKARVLHR
QIYATHLKRRGPSHPATLASLNAYATARELDGHESLALRLRTRVVAASRRYLRPDDPQ
LADAISSLAVSHYRAGNSAAARALFQEAYDVRRAIYGPSHPDALSALEFAAVCADPEA
RTAELRAVYRKRVTHADPGSPAARRTLRNLIINLRSVHVSTANPPSDSVNRVFSEPVQ
EPPGDWTEVAVRLDDETTDERVEDFELASYLHGALVAEFGTDHPETLFAETCLGHATV
CLGQLDSQIDDGLNVLRDAAEGMRVVLGCPEADLAVVDRLIDWAERLAFDD"
misc_feature complement(<257839..258123)
/locus_tag="Caci_0229"
/note="TIR domain; Region: TIR_2; cl17458"
/db_xref="CDD:248012"
misc_feature complement(255970..256197)
/locus_tag="Caci_0229"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature complement(256072..256197)
/locus_tag="Caci_0229"
/note="Tetratricopeptide repeat; Region: TPR_10;
pfam13374"
/db_xref="CDD:205553"
misc_feature complement(255844..256080)
/locus_tag="Caci_0229"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature complement(255820..255945)
/locus_tag="Caci_0229"
/note="Tetratricopeptide repeat; Region: TPR_10;
pfam13374"
/db_xref="CDD:205553"
gene complement(258162..259667)
/locus_tag="Caci_0230"
/db_xref="GeneID:8331556"
CDS complement(258162..259667)
/locus_tag="Caci_0230"
/inference="protein motif:PFAM:PF01381"
/note="PFAM: helix-turn-helix domain protein;
SMART: helix-turn-helix domain protein"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_003111024.1"
/db_xref="GI:256389460"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:8331556"
/translation="MAGLDPQERPAGSVPRADQIERMMRRITDGHLRSTGRELTQAAV
ARYFGVSAETVRSWFSGRRNPGPDRVRDLARFAGVSPIEAFVDAGWLDESDVDPGRSG
AGGGGDQMYAPEAAVHALLHDETMRARYAVRLLALESHGSYPLTTDVAAQFLLIPGAA
VPALADVERLAGMARIVPSPSAAMLRRHPDYCAVRLELAAFVAEPLRWFGQYSWQGDA
GSQTWRPAADRWPAQILVQDIVSGRSTEAAADGWSCRDQRPLVLIGGRYSSSMAAAML
AGALGWQFVLVHSGTVIDRSGQVVATRRDWLSGPAEAWREVAEHVGRSHAAGRPWPAV
LAARPHSFLTPDGSPDHGALEQLRRTPARIVYARPHEAVLDWWTERQIGLSCEREYKS
TALALRKQIEAGFDHIEEALRARAETISAERGREDLTIRCRRPSGALDPLRPQIPDGL
VDDQVRLAWRSLTWLGHTSRHAAELPTRTPRSGPLRRFKRLLEADQEASLS"
misc_feature complement(259419..259559)
/locus_tag="Caci_0230"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:238045"
misc_feature complement(order(259485..259490,259500..259502,
259509..259511,259542..259547))
/locus_tag="Caci_0230"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
misc_feature complement(259491..259493)
/locus_tag="Caci_0230"
/note="salt bridge; other site"
/db_xref="CDD:238045"
gene 259902..260978
/locus_tag="Caci_0231"
/db_xref="GeneID:8331557"
CDS 259902..260978
/locus_tag="Caci_0231"
/inference="similar to AA sequence:KEGG:Krad_3958"
/note="KEGG: kra:Krad_3958 clavaminate synthase"
/codon_start=1
/transl_table=11
/product="clavaminate synthase"
/protein_id="YP_003111025.1"
/db_xref="GI:256389461"
/db_xref="GeneID:8331557"
/translation="MKNLSAYEVYESPKTSGESRTEAVSEAAFESDPEVSAILVLTSS
EASTLERVADLVTAHALYAAHDFCAQAQLAAAELPSRVVARLQEFAWGDMNEGHLLIK
GLPQVRSLPPTPTSNVHAVAATTPMSRYQALINECVGRMIAYEAEGHGHTFQDMVPSA
MSAHSQTSLGSAVELELHTEQAFSPLRPDFVSLACLRGDPRALTYLFSARQLVATLTT
QEIAMLREPMWTTTVDESFLAEGRTFLLGFERGPIPILSGADDDPFIVFDQDLMRGIS
APAQELQQTVIRAYYAERVSHCLAPGEMLLIDNRRAVHGRSIFAPRFDGADRFLSRSF
IVADGSRSRHARSSFGRVVSARFS"
misc_feature 260016..260939
/locus_tag="Caci_0231"
/note="Clavaminic acid synthetase (CAS) -like; CAS is a
trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase
carrying out three reactions in the biosynthesis of
clavulanic acid, an inhibitor of class A serine
beta-lactamases. In general, Fe(II)-2OG oxygenases...;
Region: CAS_like; cl00184"
/db_xref="CDD:241666"
misc_feature order(260433..260435,260439..260441,260514..260516,
260841..260843,260883..260885)
/locus_tag="Caci_0231"
/note="active site"
/db_xref="CDD:238154"
misc_feature order(260433..260435,260439..260441,260841..260843)
/locus_tag="Caci_0231"
/note="iron coordination sites [ion binding]; other site"
/db_xref="CDD:238154"
misc_feature order(260442..260444,260448..260450,260463..260465,
260619..260621,260895..260897,260901..260903)
/locus_tag="Caci_0231"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:238154"
gene 260978..261880
/locus_tag="Caci_0232"
/db_xref="GeneID:8331558"
CDS 260978..261880
/locus_tag="Caci_0232"
/inference="similar to AA sequence:KEGG:CMM_0528"
/note="KEGG: cmi:CMM_0528 metal-dependent hydrolase"
/codon_start=1
/transl_table=11
/product="metal-dependent hydrolase"
/protein_id="YP_003111026.1"
/db_xref="GI:256389462"
/db_xref="GeneID:8331558"
/translation="MSDSFCSTVVTFPEGAIEASSTIVHIQRVLGLDPKATHWAVFTE
ATPFHPVDPTWPDQPGDTGVLLTDVGELPVTGCVTAAVARAGGELLVDAEITAKRGDP
EYAWLVCHLVADRAGDLPGRLVGTAAKLLVDRRRRRRLSVAHTACHLTGLALNVNLAD
RWRKPIRTDGLGRPDFDGVAIVSSRIAEDGAMDTYRLGTSLRKAGFVSEGFADGVSAL
QSAIETSVAEWVRQAGQITVLTKGSALHDRRTWECVLQEGTARTSCGGTHPQNTGELG
SVTVRCAFDPDTKLLTVATTVVPS"
misc_feature 261098..261820
/locus_tag="Caci_0232"
/note="Predicted metal-dependent hydrolases related to
alanyl-tRNA synthetase HxxxH domain [General function
prediction only]; Region: COG2872"
/db_xref="CDD:225427"
gene 262900..263061
/locus_tag="Caci_0233"
/db_xref="GeneID:8331559"
CDS 262900..263061
/locus_tag="Caci_0233"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111027.1"
/db_xref="GI:256389463"
/db_xref="GeneID:8331559"
/translation="MVLMSSRVGRQVANDVDFERWQRQAREIDYRAVSGGHWSIVDES
TADISMFGA"
gene complement(263392..263476)
/locus_tag="Caci_R0004"
/note="tRNA-Ser5"
/db_xref="GeneID:8331560"
tRNA complement(263392..263476)
/locus_tag="Caci_R0004"
/product="tRNA-Ser"
/db_xref="GeneID:8331560"
gene complement(263541..264188)
/locus_tag="Caci_0234"
/db_xref="GeneID:8331561"
CDS complement(263541..264188)
/locus_tag="Caci_0234"
/EC_number="2.7.1.21"
/inference="protein motif:PRIAM:2.7.1.21"
/note="catalyzes the formation of thymidine 5'-phosphate
from thymidine"
/codon_start=1
/transl_table=11
/product="thymidine kinase"
/protein_id="YP_003111028.1"
/db_xref="GI:256389464"
/db_xref="InterPro:IPR001267"
/db_xref="GeneID:8331561"
/translation="MAELVFFTGTMDSGKSTLALQLDHNHNARGRAGLIFTRDDRAGS
ATISSRLGLKAAAVEVGQNTDLLNHVVQLMSAGGKVDYVVADEAQFYTEDHIEQLARM
VDELSIDVYAFGITTDFRTRLFPGSKRLIELADRIEVLQVQTLCWCGARATHNARTLG
GEMVVEGEQVVVGDTAVADEIGYEVLCRRHHRRRLTAARSGAAALSPDTLPFGAA"
misc_feature complement(263628..264188)
/locus_tag="Caci_0234"
/note="thymidine kinase; Provisional; Region: PRK04296"
/db_xref="CDD:235272"
misc_feature complement(<264066..264176)
/locus_tag="Caci_0234"
/note="Nucleoside/nucleotide kinase (NK) is a protein
superfamily consisting of multiple families of enzymes
that share structural similarity and are functionally
related to the catalysis of the reversible phosphate group
transfer from nucleoside triphosphates...; Region: NK;
cl17190"
/db_xref="CDD:247744"
gene complement(264205..264516)
/locus_tag="Caci_0235"
/db_xref="GeneID:8331562"
CDS complement(264205..264516)
/locus_tag="Caci_0235"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111029.1"
/db_xref="GI:256389465"
/db_xref="GeneID:8331562"
/translation="MIRRSLTALAAAAAAELCCVAGSYLHAIRLVAHVEGVSVWTALN
SRHNASLTAWRASLTVGDRLLFVAVALVAAAAVLARPYLKPTFGRIRTRITSVRGLPR
A"
sig_peptide complement(264454..264516)
/locus_tag="Caci_0235"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.983) with cleavage site probability 0.446 at
residue 21"
gene complement(264689..265114)
/locus_tag="Caci_0236"
/db_xref="GeneID:8331563"
CDS complement(264689..265114)
/locus_tag="Caci_0236"
/inference="protein motif:PFAM:PF01906"
/note="PFAM: protein of unknown function DUF74;
KEGG: mmi:MMAR_5292 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111030.1"
/db_xref="GI:256389466"
/db_xref="InterPro:IPR002765"
/db_xref="GeneID:8331563"
/translation="MSQQPYGQPGYQQGPPPQQGQYAPPPQQQGFQQNFLCVTTNDIP
GYRIDAVYGEVFGLTVRSRNAFSQMGAGLKSMFGGELKGMTKALMDSRNDVMQRMIQE
AINRGGNAIVGMRFDTSEMGDVWTEICAYGTAVTISRQG"
misc_feature complement(264701..265009)
/locus_tag="Caci_0236"
/note="Putative heavy-metal-binding; Region: YbjQ_1;
cl00426"
/db_xref="CDD:241856"
gene 265300..266295
/locus_tag="Caci_0237"
/db_xref="GeneID:8331564"
CDS 265300..266295
/locus_tag="Caci_0237"
/EC_number="3.1.4.46"
/inference="protein motif:PRIAM:3.1.4.46"
/note="PFAM: glycerophosphoryl diester phosphodiesterase;
KEGG: sma:SAV_4224 glycerophosphoryl diester
phosphodiesterase"
/codon_start=1
/transl_table=11
/product="glycerophosphodiester phosphodiesterase"
/protein_id="YP_003111031.1"
/db_xref="GI:256389467"
/db_xref="InterPro:IPR004129"
/db_xref="GeneID:8331564"
/translation="MHSLRPSEPRPSERRRSEPVSPVRQHAALRTGASGPGLPRRPAL
EIPVIAHRGASDDVPEHTLAAYEAALLQGADGLECDVRLTADMQLVCVHDRRVNRTSN
GRGVVSTLELAQLRQLDFGSWKQPAAGEEHEYAEYPDLRREGAHRVLTLERLLQLVVE
HPHRVEMAIETKHPTRYAGLVEEHLVALLDRFGLAHPRLGETSPVRVMSFSAMSVRRI
RRLAPSLDTVLLLDRVPLRLRDGSLPRGVRIAGPGIHILRIHPEYVERVHSMGNRVHV
WTVDQPSDIDLCVELGVDAIISNRPKAVLARLGRDGTAAAAAARHGVVELNPDSP"
misc_feature 265441..266229
/locus_tag="Caci_0237"
/note="Glycerophosphoryl diester phosphodiesterase [Energy
production and conversion]; Region: UgpQ; COG0584"
/db_xref="CDD:223657"
misc_feature 265441..266208
/locus_tag="Caci_0237"
/note="Glycerophosphodiester phosphodiesterase domain of
uncharacterized bacterial glycerophosphodiester
phosphodiesterases; Region: GDPD_like_2; cd08582"
/db_xref="CDD:176524"
misc_feature order(265450..265452,265531..265533,265537..265539,
265576..265578,265807..265809,265921..265923,
266128..266130)
/locus_tag="Caci_0237"
/note="putative active site [active]"
/db_xref="CDD:176524"
misc_feature order(265450..265452,265576..265578)
/locus_tag="Caci_0237"
/note="catalytic site [active]"
/db_xref="CDD:176524"
misc_feature order(265531..265533,265537..265539,265807..265809)
/locus_tag="Caci_0237"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:176524"
gene 266366..267253
/locus_tag="Caci_0238"
/db_xref="GeneID:8331565"
CDS 266366..267253
/locus_tag="Caci_0238"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
KEGG: sco:SCO3975 regulator"
/codon_start=1
/transl_table=11
/product="anti-sigma regulatory factor, serine/threonine
protein kinase"
/protein_id="YP_003111032.1"
/db_xref="GI:256389468"
/db_xref="InterPro:IPR003594"
/db_xref="GeneID:8331565"
/translation="MGVVMSVQPESPRKSVSLSTTVTRAPAPRPADSRGTGGTEFPYT
PESVGTARHALADALQRMRVAPPAADDAVLILSELVSNALRHALPLAGGTIRVAWWMA
DDKVLRIAVTDGGRQQPGQAPPLKAAEAPDLVAPDLDDIDESAVDGRGLGIVGLLADA
WGVEPWYAPETEATSPYLHAATTSATASAASSAATSRAIHPDPSAPKTVWAAVRLHAR
HAAPPPPDDQDRRWWRRMRLSLTAHLPGTTRPRTRGTRLGGSRLGEARGGPDSDAAGS
DTAWVPRYPEARVGCAAAG"
misc_feature 266486..266860
/locus_tag="Caci_0238"
/note="Histidine kinase-like ATPase domain; Region:
HATPase_c_2; pfam13581"
/db_xref="CDD:222239"
misc_feature 266588..266851
/locus_tag="Caci_0238"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature order(266597..266599,266609..266611,266618..266620,
266696..266698,266702..266704,266708..266710,
266723..266725,266738..266740,266813..266821)
/locus_tag="Caci_0238"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature 266609..266611
/locus_tag="Caci_0238"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature order(266708..266710,266723..266725,266813..266815,
266819..266821)
/locus_tag="Caci_0238"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene complement(267790..269736)
/locus_tag="Caci_0239"
/db_xref="GeneID:8331566"
CDS complement(267790..269736)
/locus_tag="Caci_0239"
/inference="protein motif:PFAM:PF00117"
/note="PFAM: glutamine amidotransferase class-I;
chorismate binding-like;
KEGG: stp:Strop_2960 glutamine amidotransferase class-I"
/codon_start=1
/transl_table=11
/product="glutamine amidotransferase"
/protein_id="YP_003111033.1"
/db_xref="GI:256389469"
/db_xref="InterPro:IPR000991"
/db_xref="InterPro:IPR001317"
/db_xref="InterPro:IPR006220"
/db_xref="InterPro:IPR011702"
/db_xref="InterPro:IPR015890"
/db_xref="GeneID:8331566"
/translation="MPHQGQGQDTLTSPSPSLPDGPFALIRRGVEAEVELLTGQAFEQ
FPALADLPTEDSDALLALVPYRQLTERGDECHDDHAPLLAMRITERRRFGIAQLPPAT
PPVLRDGAFDVDDEAYGASVKRVLDEEIGAGEGSNFVLRRTFVGHCDSARETAYGAFC
ALLEKERNAYWTFLIDTGEGFMVGATPERHVSLADGVAVMNPISGTLREAPATASRER
VLAFLQDAKEREELAMVVDEELKMLAEVGDLGGRVRGPFLKEMANLAHTEYYIEARTT
MDPRLILRTTMFAPTATGSPIRNAFRVIKRHERGGRGYYAGVAALIGRDEAGAPTMDA
PLLLRVAYVENDGTVRVPVGATLVRGSDPYEEVRETYAKAAGVLRAFGVGFGARGGLA
VGTEVAPLGGSDAAAASVTPAPLSAPDATPIRTTPWSEDPEIAALLSARNESLSGFWL
NEHEPADLVDPQLAGRKVLIVDNEDAFTSMLAVELRALGLETTRVSHDEVPDHTTYDL
VLLGPGPGDPRDTASPRMTSVRTLAKLLIDHRVPTLGLCLGHEALAAALGLELVRLPT
PMQGTQVELDLFGTTERVAFYNSYAARKPEFLVLDTVLLPGTTLTAALRGPSFTGLQF
HPESVVTMDGLGILSREIRRLLTR"
misc_feature complement(268618..269397)
/locus_tag="Caci_0239"
/note="chorismate binding enzyme; Region: Chorismate_bind;
cl10555"
/db_xref="CDD:245331"
misc_feature complement(267817..268335)
/locus_tag="Caci_0239"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in Anthranilate synthase; Region:
GATase1_Anthranilate_Synthase; cd01743"
/db_xref="CDD:153214"
misc_feature complement(267802..268332)
/locus_tag="Caci_0239"
/note="Glutamine amidotransferase class-I; Region: GATase;
pfam00117"
/db_xref="CDD:215729"
misc_feature complement(order(267967..267978,268084..268086,
268093..268098,268189..268191,268195..268200))
/locus_tag="Caci_0239"
/note="glutamine binding [chemical binding]; other site"
/db_xref="CDD:153214"
misc_feature complement(order(267856..267858,267862..267864,
268096..268098))
/locus_tag="Caci_0239"
/note="catalytic triad [active]"
/db_xref="CDD:153214"
gene 270018..271001
/locus_tag="Caci_0240"
/db_xref="GeneID:8331567"
CDS 270018..271001
/locus_tag="Caci_0240"
/inference="protein motif:PFAM:PF02810"
/note="PFAM: SEC-C motif domain protein;
KEGG: sma:SAV_4226 hypothetical protein"
/codon_start=1
/transl_table=11
/product="SEC-C motif domain-containing protein"
/protein_id="YP_003111034.1"
/db_xref="GI:256389470"
/db_xref="InterPro:IPR004027"
/db_xref="GeneID:8331567"
/translation="MGKKSSRTAKAGPAKAVDGEIPVVGAREACPCGSGRRYKACHGR
EAAAAAHQQAAEVTANKRPFEGLPGEADIVAMRELVPAATAPLKLAGEHADRTVTLAT
VLPMAAPAVHRDTGEIMLALQTLATSGDPDRDLADALLRALDSAPGTVVDSAAPAADG
PRLRDLLDTSGDSLGITVHEDFSFWIIDGADVSPEAQLSLEHANAAAYPTKKLESVPS
AYWTRIREKGHLRWVMPHEEEKLMDALARLHAAKQSNLGEGTRYVGAFRACGLVVPVW
DLPKEMEAAEIEKPAAEFAERLAKALTDDSPLTNDQRRARAGLVSRQVTLR"
misc_feature 270099..270149
/locus_tag="Caci_0240"
/note="SEC-C motif; Region: SEC-C; pfam02810"
/db_xref="CDD:202406"
gene complement(271124..272263)
/locus_tag="Caci_0241"
/db_xref="GeneID:8331568"
CDS complement(271124..272263)
/locus_tag="Caci_0241"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sgr:SGR_798 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111035.1"
/db_xref="GI:256389471"
/db_xref="GeneID:8331568"
/translation="MAGMALSRTVRPRALALLPAVAAGGAALVGAGLPTSAAAAAAAA
SHAAASTLITVTVDSVPALSLNAFQGSYATSTLAQNAGDGSADGAQDPNGVLDRITLD
QPTQSKIHSDPAKNWADAQPAVEYTLHGKKLYAVSSVDAHAECTPSGQGVNTYVHTAP
NSVTVLGTNVGAGKTTMAVTGAQLGVAGVDHGSLDVSYTTTATQGQQAAGTSARAHMD
LTISGVFYDSQGKQLYSGQLQKLRLGDVQVACQNSGTTTPAPTPTTAVTVASSSGGSV
DGVGDPTAPGPAAPSTLKGEPDPAAYMRSPHQAGQNGQVRGNAKDEMGPAVPENGPVL
PAENAAKSSTSGGSDGSLWWALLSVLGLGGGTALYFATRRRGRHQ"
sig_peptide complement(272144..272263)
/locus_tag="Caci_0241"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.403 at
residue 40"
gene complement(272436..273062)
/locus_tag="Caci_0242"
/db_xref="GeneID:8331569"
CDS complement(272436..273062)
/locus_tag="Caci_0242"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: sen:SACE_0659 TetR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003111036.1"
/db_xref="GI:256389472"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331569"
/translation="MDASRHSDDKILDAAQSALLDLGLRNTTLAEVARRAGASRMTLY
RRYPDIDALLTEVLGRQLIRVVRRNAGLQELAGGGRSARDLLVTGTVEVVRAFHGDLL
MHKILESDAEFLLPYMTREFGPLQHYALDLLSMRLEQGHEDTSIRHGSVALQARTVLL
TAQSFVISARAAGSVPMDRLLEELREMLDAYLRPSADGAQAPDPEPAV"
misc_feature complement(272547..273053)
/locus_tag="Caci_0242"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:224228"
misc_feature complement(272892..273032)
/locus_tag="Caci_0242"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 273093..273794
/locus_tag="Caci_0243"
/db_xref="GeneID:8331570"
CDS 273093..273794
/locus_tag="Caci_0243"
/inference="protein motif:PFAM:PF00535"
/note="PFAM: glycosyl transferase family 2;
KEGG: kra:Krad_0170 glycosyl transferase"
/codon_start=1
/transl_table=11
/product="family 2 glycosyl transferase"
/protein_id="YP_003111037.1"
/db_xref="GI:256389473"
/db_xref="InterPro:IPR001173"
/db_xref="GeneID:8331570"
/translation="MEAEPVTEVTSSDVFVIIPAWNEQERIAATVRAAAALGPVLVMD
DGSRDATTRIARRAGARVLTTRNNLGKGAAMAAGVAALPQQARYVLFLDADLEDTASQ
AGPLVDAVRSGSCDMAIALPPPQPGGGHGLVVGLAREGIKRLTGFDAAAPLSGQRCLT
REAAEAVRYAARFGVEVGLTIDLLRAGYEVAEVPADLRHRVTGEDWRSQIHRARQYRD
VLLALRSRSLPPRSP"
gene complement(273760..274083)
/locus_tag="Caci_0244"
/db_xref="GeneID:8331571"
CDS complement(273760..274083)
/locus_tag="Caci_0244"
/inference="protein motif:PFAM:PF00581"
/note="PFAM: rhodanese;
SMART: Rhodanese domain protein;
KEGG: sma:SAV_4348 hypothetical protein"
/codon_start=1
/transl_table=11
/product="rhodanese domain-containing protein"
/protein_id="YP_003111038.1"
/db_xref="GI:256389474"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:8331571"
/translation="MLATTDVNALPEGGLLLDVREDDEWAAGHAPTAQHIPMSEFAAR
KDELGTPEGPVYVICRAGSRSAQVAQYLSQNGVEAVNVTGGMQAWEAAGKAVVTDSGA
AGIVI"
misc_feature complement(273814..274053)
/locus_tag="Caci_0244"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cd00158"
/db_xref="CDD:238089"
misc_feature complement(273907..273909)
/locus_tag="Caci_0244"
/note="active site residue [active]"
/db_xref="CDD:238089"
gene 274186..275463
/locus_tag="Caci_0245"
/db_xref="GeneID:8331572"
CDS 274186..275463
/locus_tag="Caci_0245"
/EC_number="6.1.1.11"
/inference="protein motif:TFAM:TIGR00414"
/note="catalyzes a two-step reaction, first charging a
serine molecule by linking its carboxyl group to the
alpha-phosphate of ATP, followed by transfer of the
aminoacyl-adenylate to its tRNA"
/codon_start=1
/transl_table=11
/product="seryl-tRNA synthetase"
/protein_id="YP_003111039.1"
/db_xref="GI:256389475"
/db_xref="InterPro:IPR002314"
/db_xref="InterPro:IPR002317"
/db_xref="InterPro:IPR006195"
/db_xref="InterPro:IPR015866"
/db_xref="GeneID:8331572"
/translation="MIDLRLLRTDPERVRASQRARGEDPALVDALLSADEARRAAVSR
FDTLRNEQKVLGKQIPKAAGEEKAALLEQAKKLADGVKAAEADQHEADDVLKQLQLSL
SNVVIDGVPEGGEDDFVLRETVGTPRDFAADGFEPRDHVELGKLLGAIDLERGVKVGG
ARQYYLTGVGALLEIALLNMAMAQATTYGFTPMITPSLVKPEAMAGTGFLGQAAENVY
HLTEDDMYLVGTSEVPLAAYHMDEILDAAKLPLRYAGYSSCYRREAGSYGKDTRGIIR
VHQFEKVEMFSYVLPEEAEAEHLRLLGWEKEFLTALEIPFRVIDVAAGDLGSSAARKY
DCEAWIPTQGKYREVTSTSNCTEFQARRLQIRMRGADGVKPLATLNGTLCAMTRMIVA
ILENHQNADGSVTVPAALRPYLGGREKLEPVAG"
misc_feature 274186..275454
/locus_tag="Caci_0245"
/note="seryl-tRNA synthetase; Provisional; Region:
PRK05431"
/db_xref="CDD:235461"
misc_feature 274186..274503
/locus_tag="Caci_0245"
/note="Seryl-tRNA synthetase N-terminal domain; Region:
Seryl_tRNA_N; pfam02403"
/db_xref="CDD:217020"
misc_feature 274540..275427
/locus_tag="Caci_0245"
/note="Seryl-tRNA synthetase (SerRS) class II core
catalytic domain. SerRS is responsible for the attachment
of serine to the 3' OH group of ribose of the appropriate
tRNA. This domain It is primarily responsible for
ATP-dependent formation of the enzyme...; Region:
SerRS_core; cd00770"
/db_xref="CDD:238393"
misc_feature order(274645..274662,274669..274689,274699..274701,
274705..274707,274711..274713,274720..274722,
274756..274767,274771..274779,274783..274785,
274837..274842,274846..274848,274858..274860,
274885..274887,274897..274899,274909..274911,
274957..274959,275020..275022,275422..275427)
/locus_tag="Caci_0245"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238393"
misc_feature order(274666..274668,274873..274875,274879..274881,
274966..274968,274972..274974,274990..274992,
274999..275001,275008..275010,275014..275016,
275023..275025,275029..275031,275035..275037,
275227..275238,275323..275325,275329..275331,
275347..275349)
/locus_tag="Caci_0245"
/note="active site"
/db_xref="CDD:238393"
misc_feature 274756..274779
/locus_tag="Caci_0245"
/note="motif 1; other site"
/db_xref="CDD:238393"
misc_feature 274963..274974
/locus_tag="Caci_0245"
/note="motif 2; other site"
/db_xref="CDD:238393"
misc_feature order(275332..275340,275347..275349)
/locus_tag="Caci_0245"
/note="motif 3; other site"
/db_xref="CDD:238393"
gene complement(275522..276583)
/locus_tag="Caci_0246"
/db_xref="GeneID:8331573"
CDS complement(275522..276583)
/locus_tag="Caci_0246"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111040.1"
/db_xref="GI:256389476"
/db_xref="GeneID:8331573"
/translation="METENPDTGRMHQLFGAALDDVDLTGDVVPNVLTGYAHKVKVRR
YQGAGVAVAALAAAGIAVNVLPHGTGGAPPTTSSATPVQQSPDYCQHQQWVRVSAGVV
VQNGNVPLAIPLSPDPRADQASCDALQKALHAVFPEARLIPAFNPDLTRDPRLDQARV
RTIEMEETTDPNKWSADLTKYFGSELTRLAAHPEDPVNVYMPGQYTLVTPGVRESFGV
AFVTAAPVANAPESFVGSVGSEDCEKMPAALKDKDQCTSVGVSAGWHGALWNTPAQGV
NAPEQTVVLTNGSGTRFQLNAHGTDDSARGIAPSGNALTDEQWARLVASPALQKYADD
YFGKAPVVPHSTPSPTHSR"
gene complement(276573..277136)
/locus_tag="Caci_0247"
/db_xref="GeneID:8331574"
CDS complement(276573..277136)
/locus_tag="Caci_0247"
/inference="protein motif:TFAM:TIGR02983"
/note="TIGRFAM: RNA polymerase sigma-70 factor, sigma-E
family; RNA polymerase sigma factor, sigma-70 family;
PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain
protein; sigma-70 region 4 domain protein;
KEGG: sgr:SGR_2995 RNA polymerase ECF-subfamily sigma
factor"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-24 subunit"
/protein_id="YP_003111041.1"
/db_xref="GI:256389477"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="InterPro:IPR014325"
/db_xref="GeneID:8331574"
/translation="MIGRLTQEELADFTAFAQARQRHLMRTAFLLSGNRQSAQDLTQT
ALLDLCRSWRRVRRADDVDAYAHRVLINAFRTSARRSDRERKALWRKASEAAGSPADG
AAPDQSVGMRLSLLAALDRLPPKARAVVVLRYWEDLSVEATAAALGCSTGTVKSQSSR
ALARLRALLGDGFATTDSEHWEISYGN"
misc_feature complement(276666..277106)
/locus_tag="Caci_0247"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:234065"
misc_feature complement(276669..276803)
/locus_tag="Caci_0247"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(276669..276674,276678..276683,
276687..276689,276717..276722,276738..276740,
276768..276770))
/locus_tag="Caci_0247"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene complement(277219..278541)
/locus_tag="Caci_0248"
/db_xref="GeneID:8331575"
CDS complement(277219..278541)
/locus_tag="Caci_0248"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: sgr:SGR_1492 major facilitator superfamily permease"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily protein"
/protein_id="YP_003111042.1"
/db_xref="GI:256389478"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331575"
/translation="MRTIINRDFTRLWYGEAVSEVGDYVFNTTLVLWIATKLGNGKSW
APVAVSGVLLSGLAATLAIAPAAGVFADRWNRKRTMLRMDAIRAVAVGGLAALAFLPA
GKLPVGVWLAIIYAVVFVINAAGTFFGPSRMAVIPDVVGGPDEIARASGITQSTAALA
GMIGPPLAAPLLFAGGVQWAMLINALSYVVSFTAIRPVPIPGNAPSPAAKAESGFWSE
FRAVLAFFAKTRVLVVLIISACIANFGAQAMNTLDVFFATRNLHAAPKLYGLLGMAIG
AGAIIGALLSTRVVRRIGTVNAVWATIGTAGVLIVAYSRQTSIWAAIPVIFLASLPIA
MVNTAMEPLLIQVTPRAMLGRVFSVITPAISVTQLGSTILFGWMISSLMLHFHADVAG
LHVGPIDTLFTVTGLLFVVAAIYAFVMLPRKDGVPAAEPDDEGELALV"
misc_feature complement(277396..278517)
/locus_tag="Caci_0248"
/note="H+ Antiporter protein; Region: 2A0121; TIGR00900"
/db_xref="CDD:162098"
gene 278772..280166
/locus_tag="Caci_0249"
/db_xref="GeneID:8331576"
CDS 278772..280166
/locus_tag="Caci_0249"
/inference="protein motif:PFAM:PF04122"
/note="PFAM: cell wall binding repeat 2- containing
protein;
KEGG: ace:Acel_1679 protease-like"
/codon_start=1
/transl_table=11
/product="cell wall binding repeat 2-containing protein"
/protein_id="YP_003111043.1"
/db_xref="GI:256389479"
/db_xref="InterPro:IPR000601"
/db_xref="InterPro:IPR007253"
/db_xref="GeneID:8331576"
/translation="MKRRTSSLLTAIALVSGAAASTLAVAPAQAATDSGTCASGSEKQ
GPISFNPSAAVAPATIGIRVAANTIDAANGCKAVLDFGDGTSTALSTDADVAHTYTNP
GDYRVTLTLQWPGYSPAVESGHLLIGGAAGQAQITRIAGADRLDTAVQISQKQWLTVD
PKSSWGQAQTAVIATSGTFPDALAGGPLAAYKRGPLLLTPPNAGLYGAANDEINRVVP
KGRTIFILGGYAAVSASVDQQLITEGYKVQRFAGQTRFDTALQVAKFGLGDPANVVVA
TGTDFPDALSAGPLAAGPRATEVAGQAPQPAAIILTNGAKFFDPSTSAYVKGKLGTAN
CNAVTAVGGAAVHALGALAGGLCHSELSGADRYATSAKVFGEFSLTYLVGVASGTTFA
DALTGAAYVANVQQPLLLTDPTHLPDPIGAYFDAMGKQAGISYVDVFGGPKAITDHVY
GQIADAAHSGEYNP"
sig_peptide 278772..278864
/locus_tag="Caci_0249"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.984 at
residue 31"
misc_feature 278913..>279107
/locus_tag="Caci_0249"
/note="Repeats in polycystic kidney disease 1 (PKD1) and
other proteins; Region: PKD; smart00089"
/db_xref="CDD:214510"
misc_feature 279180..279488
/locus_tag="Caci_0249"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
misc_feature 279513..>279758
/locus_tag="Caci_0249"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
misc_feature 279852..280127
/locus_tag="Caci_0249"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
gene complement(280193..281374)
/locus_tag="Caci_0250"
/db_xref="GeneID:8331577"
CDS complement(280193..281374)
/locus_tag="Caci_0250"
/EC_number="3.5.2.7"
/inference="protein motif:TFAM:TIGR01224"
/note="catalyzes the hydrolysis of
4-imidazolone-5-propionate to N-formimidoyl-L-glutamate,
the third step in the histidine degradation pathway"
/codon_start=1
/transl_table=11
/product="imidazolonepropionase"
/protein_id="YP_003111044.1"
/db_xref="GI:256389480"
/db_xref="InterPro:IPR005920"
/db_xref="InterPro:IPR006680"
/db_xref="InterPro:IPR013108"
/db_xref="GeneID:8331577"
/translation="MGSSVTSTLLTGIAELTTHADSGGLADSTVADAAMVVVDGRVAW
TGPGAGAPDADERVELGGRAVIPGFVDSHAHLVFAGDRAQEFAARMTGAPYSAGGIRT
TVAATRGASDDVLRSNLRRLVGEMLRQGTTTVECKSGYGLTVEDEARALRLAREQVEA
VTYLGAHVVPAEYKDRAGEYVDLVKGPMLDACAPYADFADVFCERGAFDEEQTREILT
AARAKGLDLRLHANQLGNGPGVQLAVEFGAASADHCTFLDDKDIDALAGSQTIATLLP
GVEFSTRSPYPDARRLLDAGATVAIATDCNPGSCYTNSMPFCIAVAVRDMHMSPAEAL
WAATVGGAKALRRDDVGHLGVGARADFAVLDAPSYLHLAYRPGVPLVHRVWKNGTPVA
G"
misc_feature complement(280217..281359)
/locus_tag="Caci_0250"
/note="imidazolonepropionase; Provisional; Region:
PRK14085"
/db_xref="CDD:237604"
misc_feature complement(280211..281269)
/locus_tag="Caci_0250"
/note="Imidazolonepropionase/imidazolone-5-propionate
hydrolase (Imidazolone-5PH) catalyzes the third step in
the histidine degradation pathway, the hydrolysis of
(S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to
N-formimidoyl-L-glutamate. In bacteria; Region:
Imidazolone-5PH; cd01296"
/db_xref="CDD:238621"
misc_feature complement(order(280463..280465,280616..280618,
280676..280678,280685..280687,281150..281152,
281156..281158))
/locus_tag="Caci_0250"
/note="active site"
/db_xref="CDD:238621"
gene complement(281646..283079)
/locus_tag="Caci_0251"
/db_xref="GeneID:8331578"
CDS complement(281646..283079)
/locus_tag="Caci_0251"
/inference="protein motif:TFAM:TIGR02022"
/note="catalyzes the deimination of
N-formimino-L-glutamate to ammonia and
N-formyl-L-glutamate"
/codon_start=1
/transl_table=11
/product="N-formimino-L-glutamate deiminase"
/protein_id="YP_003111045.1"
/db_xref="GI:256389481"
/db_xref="InterPro:IPR006680"
/db_xref="InterPro:IPR010252"
/db_xref="GeneID:8331578"
/translation="MTSSENPQTATTIPATTPSPNGGAASAGADRRAFWCELAWINGE
IKSKVLIEVAGGQISAVTCGVKPRPQNAEKLTGLTIPGLANVHSHAFHRALRGRTQIE
SGTFWTWRERMYAAAAHLDPDSYRELATAVFAEMALAGVTAVGEFHYVHHSPKGGLYQ
DPNAMGHALTEAAEAAGIRITLLDTCYLSGGFDNELNDVQRRFSDGDAGRWAERVEAL
RKAYAGSDTVRIGAAVHSVRAVPVDQLSPVVAFAAENEMPLHVHLSEQRAENDACLAR
HHKTPTELLHAHGALGPRTTAVHATHLSQMDIDLLGTSATAVCMCPTTERDLADGIGP
AHAVHLAGSPVNLGTDSHAMIDLFEEARAVELDERLRTERRGHWLASELLQAATTDGH
ASLGWPTTGRLQPGTPADFTTIALDTVRLAGVQPAHAAESVIFAATAADVRHVVVAGK
FTVRDHQHMLVDDVPGRLAATIGAIFK"
misc_feature complement(281655..282992)
/locus_tag="Caci_0251"
/note="N-formimino-L-glutamate deiminase; Validated;
Region: PRK09229"
/db_xref="CDD:236420"
misc_feature complement(281730..282965)
/locus_tag="Caci_0251"
/note="Superfamily of metallo-dependent hydrolases (also
called amidohydrolase superfamily) is a large group of
proteins that show conservation in their 3-dimensional
fold (TIM barrel) and in details of their active site. The
vast majority of the members have a...; Region:
metallo-dependent_hydrolases; cl00281"
/db_xref="CDD:241750"
misc_feature complement(order(282030..282032,282183..282185,
282294..282296,282813..282815,282819..282821))
/locus_tag="Caci_0251"
/note="active site"
/db_xref="CDD:238617"
gene complement(283076..284329)
/locus_tag="Caci_0252"
/db_xref="GeneID:8331579"
CDS complement(283076..284329)
/locus_tag="Caci_0252"
/EC_number="3.5.1.87"
/inference="protein motif:TFAM:TIGR01879"
/note="allantoate amidohydrolase and N-carbamoyl-L-amino
acid amidohydrolase are very similar; the allantoate
amidohydrolase from Escherichia coli forms a dimer and
binds zinc ions for catalytic activity and catalyzes the
conversion of allantoate to (S)-ureidoglycolate and
ammonia; carbamoyl amidohydrolase from Bacillus sp.
converts N-carbamoyl amino acids to amino acids, ammonia,
and carbon dioxide"
/codon_start=1
/transl_table=11
/product="allantoate amidohydrolase"
/protein_id="YP_003111046.1"
/db_xref="GI:256389482"
/db_xref="InterPro:IPR002933"
/db_xref="InterPro:IPR010158"
/db_xref="GeneID:8331579"
/translation="MSLFSVHRAVDEAEASAYSDMWRSLLPLGLNSDTGGYRRFAWNT
ADLACRDWFRSEAAARGLEVETDRNGNLWAWWGPKGPGAIVTGSHLDSVPDGGAFDGP
LGVVSSFAAVDVLRARGFTPAKPFAVACFSDEEGARFGIACAGSRLMTGALSAEKARG
LCDLDGVTMASAMEQAGQDPATLGRDDERLEGIAAYVELHVEQGKALAFTESPVAVAS
AIWPHSRWRFEFAGEANHAGTTRLEDRRDPMLTYANAVLAARKKAKLGGAVATFGRLV
VEPNGTNAIPSRVRAWLDVRAPADEILAAVTEEIIKAADERAGRDGTVLSTERESHTP
VVEFDDVLRNRLAGSLRQTFGAVPVLPTGAGHDAGILAAAVPTAMLYVRNPTGVSHAP
GEHADDRDCLAGVTALADVLQELCQ"
misc_feature complement(283079..284269)
/locus_tag="Caci_0252"
/note="allantoate amidohydrolase; Reviewed; Region:
PRK09290"
/db_xref="CDD:236456"
misc_feature complement(283094..284269)
/locus_tag="Caci_0252"
/note="M20 Peptidase beta-alanine synthase, an
amidohydrolase; Region: M20_bAS; cd03884"
/db_xref="CDD:193505"
misc_feature complement(order(283160..283162,283235..283240,
283442..283444,283655..283657,283661..283663,
283721..283723,283730..283732,283904..283906,
283925..283930,284027..284032,284063..284065))
/locus_tag="Caci_0252"
/note="active site"
/db_xref="CDD:193505"
misc_feature complement(order(283160..283162,283730..283732,
283925..283930,284030..284032,284063..284065))
/locus_tag="Caci_0252"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193505"
misc_feature complement(order(283241..283243,283442..283444,
283448..283450,283472..283483,283487..283492,
283502..283525,283544..283549,283553..283558,
283562..283570,283574..283576,283580..283585,
283595..283597,283604..283606,283610..283624,
283655..283657,283700..283705,283712..283723))
/locus_tag="Caci_0252"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:193505"
gene complement(284332..286002)
/locus_tag="Caci_0253"
/db_xref="GeneID:8331580"
CDS complement(284332..286002)
/locus_tag="Caci_0253"
/EC_number="4.2.1.49"
/inference="protein motif:TFAM:TIGR01228"
/note="catalyzes the formation of
4-imidazolone-5-propanoate from urocanate during histidine
metabolism"
/codon_start=1
/transl_table=11
/product="urocanate hydratase"
/protein_id="YP_003111047.1"
/db_xref="GI:256389483"
/db_xref="InterPro:IPR000193"
/db_xref="GeneID:8331580"
/translation="MTATSGPRPVRAARGTSITAQGWQQEAALRMLMNNLDPEVAEHP
DELVVYGGTGKAARNWPSFDAMVRTLQTLKNDETMLVQSGKPVGVMQTHEWAPRVLLA
NSNLVGDWANWEEFRRLDALGLTMYGQMTAGSWIYIGTQGILQGTYETFAAVAAKKFN
DTLAGTITLTAGLGGMGGAQPLAVTMNGGVAICVDCDERSIDRRVEHRYLDVKANSLD
HALQLATEARDKREALSIGVLGNAAELVPRLLAMDAPIDIVTDQTSAHDPLAYLPLGM
DFHDMKQFAKDKPAEFTQRARESMAKHVEAMVGFQDKGAEVFDYGNSIRGEAQLAGYT
RAFDFPGFVPAYIRPLFCEGKGPFRWAALSGEASDIAKTDKAILELFPENESLARWIK
MAGERVHFQGLPARICWLGYGERDKAGARFNDMVADGTLAAPIVIGRDHLDAGSVASP
YRETEAMADGSDAIADWPLLNAMVNVASGASWVSIHHGGGVGMGRSIHAGQVTVADGT
KLAGEKVRRVLTNDPGMGVIRHVDAGYDRADEVADERGVRVPMREGDA"
misc_feature complement(284344..286002)
/locus_tag="Caci_0253"
/note="urocanate hydratase; Provisional; Region: PRK05414"
/db_xref="CDD:235448"
gene 286093..287646
/locus_tag="Caci_0254"
/db_xref="GeneID:8331581"
CDS 286093..287646
/locus_tag="Caci_0254"
/EC_number="4.3.1.3"
/inference="protein motif:TFAM:TIGR01225"
/note="catalyzes the degradation of histidine to urocanate
and ammmonia"
/codon_start=1
/transl_table=11
/product="histidine ammonia-lyase"
/protein_id="YP_003111048.1"
/db_xref="GI:256389484"
/db_xref="InterPro:IPR001106"
/db_xref="InterPro:IPR005921"
/db_xref="GeneID:8331581"
/translation="MSQVVVIGEADLTFGDVVAVARDGARVELSATSLKALAEGRAVV
DRLAAAPTPAYGISTGFGALATRHIDPEMRAQLQRSLIRSHAAGMGPLVEPEVIRALT
LMRLKTLATGHTGVRPVVAETMAALLNSGVTPAVREYGSLGCSGDLAPLSHVALVLMG
EGEVVGADGVSAVAAGPVLAEHGIEPLELAPKEGLALINGTDGMLGMLILALGDLTEL
VKVADISAAMSVEALLGTDKVFRPELQAIRPHPGQAASAANLVKVLDGSPIMESHREP
NECTRVQDAYSLRCAPQVAGATRDTMAHAATVAERELASIVDNPVVLLADGRVESNGN
FHGAPVAMVLDFLAIAAADLGSIAERRTDRMLDVARSHGLPPFLADDPGVDSGLMIAQ
YTQAALVSENKRLAVPASVDSIPSSAMQEDHVSMGWSAARKLRTAVDNLRRILAVELV
AAARALELRAPLQPAAGTGAAVRALREAGVGGPGPDRFLSPELRAAEDALKSGAVVAA
VETAVGPLN"
misc_feature 286174..287412
/locus_tag="Caci_0254"
/note="Phenylalanine ammonia-lyase (PAL) and histidine
ammonia-lyase (HAL); Region: PAL-HAL; cd00332"
/db_xref="CDD:176460"
misc_feature order(286255..286263,286267..286269,286273..286275,
286324..286326,286333..286335,286663..286677,
286687..286689,286948..286950,286957..286959,
287047..287049,287083..287085)
/locus_tag="Caci_0254"
/note="active sites [active]"
/db_xref="CDD:176460"
misc_feature order(286270..286275,286330..286332,286339..286362,
286423..286425,286507..286512,286549..286551,
286558..286560,286819..286824,286831..286836,
286840..286842,286849..286851,286939..286941,
286945..286953,286957..286962,286969..286974,
286990..286995,287002..287004,287011..287016,
287023..287028,287035..287040,287053..287061,
287074..287076,287080..287100,287104..287109,
287116..287118,287128..287130,287149..287151,
287158..287160,287170..287172,287182..287184,
287191..287193,287200..287202,287239..287244,
287248..287253,287257..287268,287272..287274,
287278..287295,287299..287310,287341..287361,
287368..287370,287386..287391,287398..287400,
287407..287412)
/locus_tag="Caci_0254"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176460"
gene complement(287731..288150)
/locus_tag="Caci_0255"
/db_xref="GeneID:8331582"
CDS complement(287731..288150)
/locus_tag="Caci_0255"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111049.1"
/db_xref="GI:256389485"
/db_xref="GeneID:8331582"
/translation="MAARGWNRQYITQVHIEEPLAGTCGNSLGPETDQNDVWDARYPS
TNGRDYADQQVHTYVSAAYAASRVAASDPKCSGVTARTAGGFAWHGTAREGIQHVLFV
RLNNKVSTLVITVDGHDYDSALDTALLQTMAQRLANS"
gene 288182..288544
/locus_tag="Caci_0256"
/db_xref="GeneID:8331583"
CDS 288182..288544
/locus_tag="Caci_0256"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111050.1"
/db_xref="GI:256389486"
/db_xref="GeneID:8331583"
/translation="MVVDGGAEGVGDASSVGGGELSVVEAVVEPEADADFEVDVEAAP
LLVLLLVLVLVAGFAGDADELLLPHAPRAALSAIAHPAATTVRILTVSGIEFPVLHWS
QDGWWTFHLARGLPARAG"
gene 288652..289038
/locus_tag="Caci_0257"
/db_xref="GeneID:8331584"
CDS 288652..289038
/locus_tag="Caci_0257"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sma:SAV_5745 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111051.1"
/db_xref="GI:256389487"
/db_xref="GeneID:8331584"
/translation="MASQTARHKMAICFVGSAIVLVGWMVFLANTLHGAATVSHWSTV
WIGLDTMEALALATLGILLVRHDHRARTAATVAATLFGMDAWFDVMLSQGGDFAQALV
LAVVFEIPLAAACAGIARQTARWYDV"
sig_peptide 288652..288756
/locus_tag="Caci_0257"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.953) with cleavage site probability 0.852 at
residue 35"
gene complement(289052..290407)
/locus_tag="Caci_0258"
/db_xref="GeneID:8331585"
CDS complement(289052..290407)
/locus_tag="Caci_0258"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1; protein
of unknown function DUF894 DitE;
KEGG: stp:Strop_2409 major facilitator transporter"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily protein"
/protein_id="YP_003111052.1"
/db_xref="GI:256389488"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR010290"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331585"
/translation="MAGKLPSRFSRIWSASAVSALGDGVYFAAVPLLALTLTRNPIML
GAMEACALLPWLFFGMLGGALVDRWDRRRTMVIADLCRFSLLVLVTALIAAGAVDIYF
LFVVVFLLGIGQVFFDTASVAFLPEVLDRDLDTLQVANSRLQGAQQAFGGFVGPPVGS
LLFGLGRAVPILGDAVSFLFSSLTIWSLPKSAPKPAKPRGSLLREAREGAAFLFGNRL
LVGLSLRPAVGNFAFLGASAVLVLYVKETLHLGTTAYGIYLTANAIGALGGSAVAPRL
AGKLGTGGTLTLTAVVEAVSLLGIGLSPNAWTAGIGEMVLGAAMGATMGLGPAVRQAI
VPDHLMGRVAATGRLIALCAGPVGALFGGWLANVAGLRAPFIAGAGILAVMAVVAARL
TSNTRIEAALAEAAGRRERETSQEQEQEQGQGQDRGQKQAQAVEQAVEANVAADAVAM
A"
sig_peptide complement(290303..290407)
/locus_tag="Caci_0258"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.709) with cleavage site probability 0.368 at
residue 35"
misc_feature complement(289298..290383)
/locus_tag="Caci_0258"
/note="H+ Antiporter protein; Region: 2A0121; TIGR00900"
/db_xref="CDD:162098"
gene complement(290407..290922)
/locus_tag="Caci_0259"
/db_xref="GeneID:8331586"
CDS complement(290407..290922)
/locus_tag="Caci_0259"
/inference="protein motif:PFAM:PF01022"
/note="PFAM: ArsR family transcriptional regulator;
SMART: ArsR family transcriptional regulator;
KEGG: bcz:BCZK1497 transcriptional regulator"
/codon_start=1
/transl_table=11
/product="ArsR family transcriptional regulator"
/protein_id="YP_003111053.1"
/db_xref="GI:256389489"
/db_xref="InterPro:IPR001845"
/db_xref="GeneID:8331586"
/translation="MPTDEEPDAIHIQSDEQLRAVASHTRHRILRVLRDKPATITQVA
ERLGIAKGSSNHHMKVLAKAGLVAVVETRKVGGVTEQYYAMTGRTIELPETGAGQPEM
LMRHALADIEAAPPSDQRTVFLKHARLSPEAWVEFNERLQALIGELHDASDPTQPAAD
LFVAFYRPKDV"
misc_feature complement(<290752..290871)
/locus_tag="Caci_0259"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:238042"
misc_feature complement(order(290818..290820,290827..290832,
290839..290844,290851..290853,290860..290862,
290866..290871))
/locus_tag="Caci_0259"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238042"
misc_feature complement(order(290755..290760,290764..290775,
290800..290808,290845..290853,290863..290868))
/locus_tag="Caci_0259"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238042"
misc_feature complement(order(290797..290799,290806..290808))
/locus_tag="Caci_0259"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:238042"
gene complement(291017..291988)
/locus_tag="Caci_0260"
/db_xref="GeneID:8331587"
CDS complement(291017..291988)
/locus_tag="Caci_0260"
/inference="protein motif:PFAM:PF01418"
/note="PFAM: helix-turn-helix protein RpiR; sugar
isomerase (SIS);
KEGG: sco:SCO0724 transcriptional regulator"
/codon_start=1
/transl_table=11
/product="RpiR family transcriptional regulator"
/protein_id="YP_003111054.1"
/db_xref="GI:256389490"
/db_xref="InterPro:IPR000281"
/db_xref="InterPro:IPR001347"
/db_xref="GeneID:8331587"
/translation="MTTPEPVTPTTSAEIAAPPSVTPATPAAASAASAGSRLSSTLPP
ADELLALLDGRRLSPAQRRIAHYLLENLPEVAFLSSMELAERVGVSQPSVTRFAAALG
FSGYPELRAALRPIALRVPEAGIHGERIAGNELHSALESDQANLEALHKYAADPARLS
RLGSDLAASEPLSVIGLRMSAPVASYFAYGAARIHPDVRVVHTPGSLAHEALLQAVAA
GGTWLVVFVLPRYPAESVVVLRSARELGLKTAVITDVPLVPFAHLADVLLPVGVGSRS
VFDSHAAPMAFAALLLQALADAAPERTQERLEAYEALAETRGFYVSK"
misc_feature complement(291149..291823)
/locus_tag="Caci_0260"
/note="Transcriptional regulators [Transcription]; Region:
RpiR; COG1737"
/db_xref="CDD:224651"
misc_feature complement(291650..291823)
/locus_tag="Caci_0260"
/note="Helix-turn-helix domain, rpiR family; Region:
HTH_6; pfam01418"
/db_xref="CDD:201784"
misc_feature complement(291173..291469)
/locus_tag="Caci_0260"
/note="RpiR-like protein. RpiR contains a SIS (Sugar
ISomerase) domain, which is found in many phosphosugar
isomerases and phosphosugar binding proteins. In E. coli,
rpiR negatively regulates the expression of rpiB gene.
Both rpiB and rpiA are ribose phosphate...; Region:
SIS_RpiR; cd05013"
/db_xref="CDD:240144"
misc_feature complement(order(291308..291310,291449..291451))
/locus_tag="Caci_0260"
/note="putative active site [active]"
/db_xref="CDD:240144"
gene 292147..294393
/locus_tag="Caci_0261"
/db_xref="GeneID:8331588"
CDS 292147..294393
/locus_tag="Caci_0261"
/inference="protein motif:PFAM:PF02754"
/note="PFAM: protein of unknown function DUF224 cysteine-
rich region domain protein;
KEGG: sgr:SGR_3436 iron-sulphur-binding reductase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111055.1"
/db_xref="GI:256389491"
/db_xref="InterPro:IPR001450"
/db_xref="InterPro:IPR004017"
/db_xref="InterPro:IPR017900"
/db_xref="GeneID:8331588"
/translation="MQLAAIVVSLVISVIGFGLLGRTAVYIYQFVKLGQSTAPGVRSN
EPLERTRNLFREFLGHTRLARKGKRWIGAMHWVVMVGFGLLFFTLVTAYGQLFSADFA
IPLIGRWWPFEFVTEVISFVMILAIAALIGIRLRNRPAGAGSKEKGKRSRFFGSTMWQ
AYFVEGVILGIGLCIMLLRGFEGALGGHLSYSAHYPVSYPLVHAFDGMSRGSLENWIY
AIAAVKIVISMAWAITIGLNSTMSVAWHRFLAFPNIWFKKKADGGTALGALSPMASGG
VPIDFEDPAEDARFGVGAVEDFTWKGLLDFSTCTECGRCQDQCPAWNTDKPLSPKLLM
LALRDHSAAKAPYLFAGGGKDLEGNEKLAEEKWLSLPDMVRAEAERPLIGTAEENGVI
DPDILWSCTTCGACVEQCPVDIEHVDHIVDMRRYQVMIESSFPSEAGTMLKNLEKAQN
PWGMQPKKRTEWIQELDFEVPVFGETLEDISEVEYLYWVGCAGSLEDRAKKTTKAFAE
LLHIAGVKFAVLGGMESCTGDPARRLGNEFLFQMLGQGNVEMLNEVFGEDTPREKRKI
VATCPHCFNSLANEYPQLGGEYDVIHHTQLLDTLVSEGKLTPVTPIDQNITYHDPCYL
GRHNKVYTPPREIIAKVPGLKNTEMHRCKEKGFCCGAGGARMWMEERIGKRINVERVD
EALSTNPDVISTACPYCLVMLGDSITARKQAGEVPESMEVVDVAQLLLTSVKPAPASS
AEPAAANA"
misc_feature 293041..294333
/locus_tag="Caci_0261"
/note="Fe-S oxidoreductase [Energy production and
conversion]; Region: GlpC; COG0247"
/db_xref="CDD:223325"
misc_feature 293317..293388
/locus_tag="Caci_0261"
/note="4Fe-4S binding domain; Region: Fer4; pfam00037"
/db_xref="CDD:215671"
misc_feature 293599..293877
/locus_tag="Caci_0261"
/note="Cysteine-rich domain; Region: CCG; pfam02754"
/db_xref="CDD:202376"
misc_feature 293992..294258
/locus_tag="Caci_0261"
/note="Cysteine-rich domain; Region: CCG; pfam02754"
/db_xref="CDD:202376"
gene 294505..295530
/locus_tag="Caci_0262"
/db_xref="GeneID:8331589"
CDS 294505..295530
/locus_tag="Caci_0262"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sgr:SGR_5144 lipoprotein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111056.1"
/db_xref="GI:256389492"
/db_xref="GeneID:8331589"
/translation="MSFDEPDGYRDDLGRTRDDGSRYPASGSPDSEYGDDDDYDDSDP
GDEPTAPLPTRGRPVVPPEPPSEWRKRGSRVWRFTRTLLITVLVLVGLAAVGNVLINR
YPRISKHTYTYTNVQRMLIAVDGNGSINVTGSDTDQVTIKATDRATLLDPVERQIISA
GGYLLVSVHCPNSECSSKYTIQVPRSMSVEAMMDHSSDQADISATGLDAAVQLFTGRG
NVTVNHLATTSDVSVTANGQVVANDVSAANLDVFAPIGDKIDLQVSGDISNIQNIRVT
AGQPAEVTLKVPAGGYRFACVPAGHCTGANGDITQDEASPVHEDQTSTHNIQVNVVQN
TAKIQAN"
gene complement(295622..295744)
/locus_tag="Caci_0263"
/db_xref="GeneID:8331590"
CDS complement(295622..295744)
/locus_tag="Caci_0263"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111057.1"
/db_xref="GI:256389493"
/db_xref="GeneID:8331590"
/translation="MEVLIIFGGVYAAFLIGRVLQYLSDAKRVLGRGGDRNGKR"
gene 296375..297319
/locus_tag="Caci_0264"
/db_xref="GeneID:8331591"
CDS 296375..297319
/locus_tag="Caci_0264"
/inference="protein motif:SMART:SM00530"
/note="SMART: helix-turn-helix domain protein;
KEGG: fal:FRAAL0518 DNA-binding protein"
/codon_start=1
/transl_table=11
/product="helix-turn-helix domain-containing protein"
/protein_id="YP_003111058.1"
/db_xref="GI:256389494"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:8331591"
/translation="MRANQRNQPVTGINVLRWELGSELRTLRLAAGKSIADAARHLEC
SDAKISRMENGQRGAVARDVRDLCKLYGVPAQRRDQLISLSREAVDADKGTTPIPAKY
STFIALESQARSLRNYEMTFVPGLLQTERYAWETITRNGDSRDEADVERLVQIRMDRQ
KRIWNDSSLKAHFVIDENVLWRPAGVDGRTRAIREEQIDRLIRATGLDHVTLQVIPYV
AGFYQGMEGATIHLLNLDDGPKTGSACYIEGVFRELFVRGHGEIADIGAKFAAMADTA
LSALDTRKFLMRLLKGNYEHWSSARPQGSSGLGKVAMS"
misc_feature 296435..296596
/locus_tag="Caci_0264"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:238045"
misc_feature order(296447..296449,296459..296461,296534..296536)
/locus_tag="Caci_0264"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238045"
misc_feature order(296456..296458,296531..296533)
/locus_tag="Caci_0264"
/note="salt bridge; other site"
/db_xref="CDD:238045"
misc_feature order(296477..296482,296513..296515,296522..296524,
296534..296539)
/locus_tag="Caci_0264"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
gene 297316..297522
/locus_tag="Caci_0265"
/db_xref="GeneID:8331592"
CDS 297316..297522
/locus_tag="Caci_0265"
/inference="protein motif:PFAM:PF04149"
/note="PFAM: protein of unknown function DUF397;
KEGG: sen:SACE_6608 regulator"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111059.1"
/db_xref="GI:256389495"
/db_xref="InterPro:IPR007278"
/db_xref="GeneID:8331592"
/translation="MIGNDGLQWRKAAASSGNGSCVELAPGLAGSVYMRDSKDPQGPV
LTFTRKEIAAFLEGARGGEFDDLA"
misc_feature 297331..297495
/locus_tag="Caci_0265"
/note="Domain of unknown function (DUF397); Region:
DUF397; pfam04149"
/db_xref="CDD:202911"
gene 297780..297989
/locus_tag="Caci_0266"
/db_xref="GeneID:8331593"
CDS 297780..297989
/locus_tag="Caci_0266"
/inference="protein motif:PFAM:PF04149"
/note="PFAM: protein of unknown function DUF397;
KEGG: nfa:nfa56120 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111060.1"
/db_xref="GI:256389496"
/db_xref="InterPro:IPR007278"
/db_xref="GeneID:8331593"
/translation="MEIDRSKARWTKATASSGNGACVEAASVKEDEILVRNSRDPEGP
KLAFTKAEWVAFLAGVKAGEFDAIV"
misc_feature 297801..297965
/locus_tag="Caci_0266"
/note="Domain of unknown function (DUF397); Region:
DUF397; pfam04149"
/db_xref="CDD:202911"
gene 298052..300037
/locus_tag="Caci_0267"
/db_xref="GeneID:8331594"
CDS 298052..300037
/locus_tag="Caci_0267"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
KEGG: sma:SAV_2672 HSP90 family protein"
/codon_start=1
/transl_table=11
/product="HSP90 family protein"
/protein_id="YP_003111061.1"
/db_xref="GI:256389497"
/db_xref="InterPro:IPR001404"
/db_xref="InterPro:IPR003594"
/db_xref="GeneID:8331594"
/translation="MSSEKPLVSESASAATDAGGRGLPTAHAFQVDLRGIVDLLSHHL
YSSPRVFVRELLQNAVDAITARRAVDGGAPGVVRIIADGAQVQVRDSGIGLTEDEVHR
FLATIGRSSKRGGAGADGFGGGVGGGFGGGFGDAESVLELGRSDFLGRFGIGLLACFV
VADEISVVTKSAVDAEAPAVEWRGASDGHYDIRILAPEETPAQPGTTVTLKPSRGKEF
WFQAPRVVELARDFGSLLPYETVLEDEAGYTYRITETPPVWDREYPSPGTRFEALAAY
CQDTLGFAPLDIIELNIPLLGIKGAAYILPTAATAATASEQGGHRVHIKGMLLTDQAR
GLLPDWAFFVRCVIDTDALRPTASREALYEDDRLAAVREALGNRVRDWLAGLAATDPP
RLNRLLAVHYLGVKALARFDDDLFALTLPWLPFETTSGRLPLTAFADQHRVIHLTAGD
EEFQQVSQIAAAVGLGVVNGGYTYDADLVRKLPRALPGVTVLDLDPETIAAHLDTVDS
VEELAAGPLLATARRVLDVQDCDVALRAYHPVTIPALLLDGRDARHERARADAESEAL
ADGDDLWAGILGALRTVGPRARLVLNHRSPLIQGLIELEDAELAATGIEAVYGQALLL
SKRPIRSSESALLNRAFLGLLGYAVGQRQEPETEEED"
misc_feature 298124..300022
/locus_tag="Caci_0267"
/note="HSP90 family protein; Provisional; Region:
PRK14083"
/db_xref="CDD:237603"
misc_feature 298202..>298390
/locus_tag="Caci_0267"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature 298223..298225
/locus_tag="Caci_0267"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature order(298325..298327,298331..298333)
/locus_tag="Caci_0267"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene 300047..303094
/locus_tag="Caci_0268"
/db_xref="GeneID:8331595"
CDS 300047..303094
/locus_tag="Caci_0268"
/inference="similar to AA sequence:KEGG:SAV_2673"
/note="KEGG: sma:SAV_2673 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111062.1"
/db_xref="GI:256389498"
/db_xref="GeneID:8331595"
/translation="MSSTHMPSTSEPAFHQMTWTPEDLRAALEANENEPPGRARSVRA
ETLLAAADKLGDPETQICALHTVIEAYERGGESFRSPVLFSRLLRLWDRHGKTLRDAS
RLEYETHWVFKWMTSDLLSVPEVPLATVTGFVDEMERRYRLAGYGMRAVHAQRFRIAE
HLGDTAQAEVHFGRWLSADRDLMSDCRACEHLTQGVWRAENGDDLAAMRLWRPTVENE
ISCLDEPASTLAASLKPLLRLRRYDEARSNHLRGYRLLRGHVELRTAFGRHIEFCVLS
GNGERALEILAENRRLFDPPYEPLDYLEFLSCVALLLRSRVDAGSTAIVAGPEGRDWP
VAELLARVRSEIDDLSGRFDRRNGTKVVSARVAATMDQTWLVAELPLIVSQRPRPQQF
QKPEQAQQPGQAHEPDQAPLAAVPAQREPVAEPPDPDADTDFYDLLAEARRLFNVAHP
SAMKMWERVAIAADRRGIVLDLEAQAQLAEERAAEALDREDMDRAVTLLGEAVERYKA
GGLEGRAVAVQARRLLAEALQKKTYEPIPEQALAALYATARVLQARGLAEPEDILTVR
RAQAFEARRTTEVGADTDTGTGTDRDRESAFDHFAASVEALLADAIEFDVPARAAAAH
TMRAEIAQRRGRPEESVPELLAAIALYDRAGRPWANLHPNMLLAQAYLASDRDADAER
AGLAALDIAERWPEQRFPAGYTRQVLANATGGQGRYTDSAEHALHAVGWADRHGVPDL
AASARHSLAFAYEQLGRDADAAAILESALPEMIRHLDDPTVVNARWALARCLGRLEDY
RGAAEQYLLAASIAEHFPQQGGHAMLAASAGHALRAAGLADEARRAFDRAVILLRALP
DPINLAKTLRALAWVTFGESEETAHDIEREDVLDQVLLLFAEAAQVLETAEASGAYER
DAQVIAYELAETDDQLARLHLNADLSDKAMPYAERAAAGFRALLPHSAMDYDFSEQMV
AWLLDRYGSRDAAVERLREAIAACTEAGVEAVRCVAFLEQLGD"
misc_feature 302258..302485
/locus_tag="Caci_0268"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
gene 303169..303735
/locus_tag="Caci_0269"
/db_xref="GeneID:8331596"
CDS 303169..303735
/locus_tag="Caci_0269"
/inference="protein motif:TFAM:TIGR02983"
/note="TIGRFAM: RNA polymerase sigma-70 factor, sigma-E
family; RNA polymerase sigma factor, sigma-70 family;
PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain
protein; sigma-70 region 4 domain protein;
KEGG: fre:Franean1_0089 ECF subfamily RNA polymerase
sigma-24 factor"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-24 subunit"
/protein_id="YP_003111063.1"
/db_xref="GI:256389499"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="InterPro:IPR014325"
/db_xref="GeneID:8331596"
/translation="MRGEKRDRDRDRDRDGNDRRGIEEAEFREYMVSRWGGLVRFAYG
LTGDRGHAEDLAQTALAKAYASWSRVRRADDPDAYVRRILINANHRRFRKRRVDEHAG
PGAAAREPVVTDGTAAFDQREALVAALMELPPKQRAVVVLRYWDGLTETQAATVLGCS
VGTVKSQASRALAKLRTSTQLQDGKVIS"
misc_feature 303235..303699
/locus_tag="Caci_0269"
/note="RNA polymerase sigma-70 factor, sigma-E family;
Region: SigE-fam_strep; TIGR02983"
/db_xref="CDD:132028"
misc_feature 303259..303456
/locus_tag="Caci_0269"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:218138"
misc_feature 303532..303696
/locus_tag="Caci_0269"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(303565..303567,303595..303597,303613..303618,
303646..303648,303652..303657,303661..303669,
303673..303678,303682..303684)
/locus_tag="Caci_0269"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 303732..304865
/locus_tag="Caci_0270"
/db_xref="GeneID:8331597"
CDS 303732..304865
/locus_tag="Caci_0270"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: fal:FRAAL1192 serine/threonine protein
kinase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111064.1"
/db_xref="GI:256389500"
/db_xref="GeneID:8331597"
/translation="MNDAYGGPDTDGEAQDGEGLFADLGHFETGAIPVDATVRQGRAI
RTRRRVIGSGMLAIAAALSIGVPVAIAGGGSSAAGAASGPDGVYAAVSSGPRITVNPT
PLVHGKGQFSGAVDGKKWSIGFDNKNCYDILWACGSQTLDPSTKYGTLGVNATVGNTD
DYTLFTQRDVASVTVVLQDGEVLHLETVPVNGTPVVLFALPPGLGVSKIVLFDGNGAQ
LGFSAPFTIKGSFSAQGRWYKPGETPPPAAGPVELARGTMGGDQIVMTAYTGPSGPCI
VSVLGSTSNADCIHTGTITGSSIDRNGGVGEAASGLVAPNIARLQLDFADGTNVPVPV
KSLGGYRFFAYIVPSGKQSTGVTAFDAAGKALPVQTNTQYNAG"
gene 305036..306319
/locus_tag="Caci_0271"
/db_xref="GeneID:8331598"
CDS 305036..306319
/locus_tag="Caci_0271"
/EC_number="6.3.4.4"
/inference="protein motif:TFAM:TIGR00184"
/note="catalyzes the formation of
N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine
monophosphate and GTP in AMP biosynthesis"
/codon_start=1
/transl_table=11
/product="adenylosuccinate synthetase"
/protein_id="YP_003111065.1"
/db_xref="GI:256389501"
/db_xref="InterPro:IPR001114"
/db_xref="GeneID:8331598"
/translation="MPALVLVGAQWGDEGKGKATDLLGGSVDYVVRYQGGNNAGHTVV
IGDQKYALHLLPSGILSPGCVPVIGNGVVIDPAVLFAELDGLDQRGVDTSRLLISANA
HLITPYHRTMDKVSERFLGKNKIGTTGRGIGPTYADKINRIGVRVQDLFDPSILLQKV
EGALRDRNQMLVKVYNRRALSAEAVVEEYLGYAERLRPMVADTSLVVNKALDEGKVVL
LEGGQGTLLDVDHGTYPFVTSSNPTTGGACTGAGIGPTRVTRSIGILKAYATRVGAGP
FPTELFDENGEALRRIGHEYGVTTGRDRRCGWFDAPVARYASRVNGLTDFFLTKLDVL
TGFERIPVCVAYDVDGVRHDEIPMTQTDFHHATPIYEEFPGWTEDISGCKSFEDLPEN
AQSYVKALEKMSGAPISAIGVGPERNATIQLRSFL"
misc_feature 305042..306298
/locus_tag="Caci_0271"
/note="Adenylosuccinate synthetase; Region:
Adenylsucc_synt; smart00788"
/db_xref="CDD:197875"
misc_feature 305042..306280
/locus_tag="Caci_0271"
/note="Adenylosuccinate synthetase (AdSS) catalyzes the
first step in the de novo biosynthesis of AMP. IMP and
L-aspartate are conjugated in a two-step reaction
accompanied by the hydrolysis of GTP to GDP in the
presence of Mg2+. In the first step, the...; Region: AdSS;
cd03108"
/db_xref="CDD:239382"
misc_feature order(305072..305074,305078..305086,305153..305161,
305165..305167,306023..306025,306029..306031,
306275..306280)
/locus_tag="Caci_0271"
/note="GDP-binding site [chemical binding]; other site"
/db_xref="CDD:239382"
misc_feature order(305078..305080,305087..305089,305156..305158)
/locus_tag="Caci_0271"
/note="ACT binding site; other site"
/db_xref="CDD:239382"
misc_feature order(305147..305149,305408..305410,305417..305419,
305702..305704,305747..305749)
/locus_tag="Caci_0271"
/note="IMP binding site; other site"
/db_xref="CDD:239382"
gene 306400..307788
/locus_tag="Caci_0272"
/db_xref="GeneID:8331599"
CDS 306400..307788
/locus_tag="Caci_0272"
/inference="protein motif:PFAM:PF00202"
/note="PFAM: aminotransferase class-III;
KEGG: sgr:SGR_3382 aminotransferase"
/codon_start=1
/transl_table=11
/product="class III aminotransferase"
/protein_id="YP_003111066.1"
/db_xref="GI:256389502"
/db_xref="InterPro:IPR005814"
/db_xref="GeneID:8331599"
/translation="MYVLVMTEISSDDLKAAGAQVFADDRAHVFHSWSAQGAITPLPI
AGAEGSYFWDYEGNRYLDFSSQLVNTNIGHQHPKVVAAIQEQAGKLCTIAPSFANDVR
GEAARLIAELAPGDLNYVFFTNGGAEAVENAVRMARLHTGRTKVLSTYRSYHGSTSTA
ISLTGDPRRWANDAVGQSTGGAVHFFGPHLYRSHFHATTEAEECERALLHLEQTIQYE
GPATVAAIILETIVGTAGVLMPPAGYLAGVRALCDKYGIVYIADEVMAGFARSGAWFA
VDHWGVTPDLITFAKGSNSGYVPVGGVIISEKIRETFKDRVYPGGLTYSGHPLACASI
VATINAMKEEGVIENAARLGEEVFGPALREIAAKHASVGEVRGVGAFWALDLVRSKET
REMLVPYNASGADAAPMNELAAAMKARGVWPFVNFNRLHVVPPCTISEADARKGLAAL
DEALDVVDVYAN"
misc_feature 306415..307782
/locus_tag="Caci_0272"
/note="hypothetical protein; Provisional; Region:
PRK06062"
/db_xref="CDD:235687"
misc_feature 306463..307761
/locus_tag="Caci_0272"
/note="Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The major
groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase;
Region: OAT_like; cd00610"
/db_xref="CDD:99735"
misc_feature order(306772..306780,306856..306861,306865..306867,
307084..307086,307183..307185,307189..307194,
307270..307272)
/locus_tag="Caci_0272"
/note="inhibitor-cofactor binding pocket; inhibition site"
/db_xref="CDD:99735"
misc_feature order(306775..306780,306856..306861,307084..307086,
307183..307185,307192..307194,307270..307272)
/locus_tag="Caci_0272"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature 307270..307272
/locus_tag="Caci_0272"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene 307866..309344
/locus_tag="Caci_0273"
/db_xref="GeneID:8331600"
CDS 307866..309344
/locus_tag="Caci_0273"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: mpo:Mpop_5291 OmpA/MotB domain protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111067.1"
/db_xref="GI:256389503"
/db_xref="GeneID:8331600"
/translation="MSHEVVFLPHILGQTWAQALAAARTAAREEDPRIVAARLEPWPD
LVLHAAQILGQIEEFRGRGQRELVHPVTRLRFTFFGEDGVIALPYWYDGPVARMAATM
AFRFAHAVESDTGLAAYDPQLRTPLSEMGLEKFVAGYLRGRERALGQAQARGPVPVGH
ALPAGRSATRRELAAGPSAGRGAGFDGGGSGGPGAPGASGGAGARQGADSSRPPREVA
RSPREPKAAPRQNTDVRPGPDASRPTDPARLRPAGPVRGADAAGREAQARPRPNSDQR
QPANPVRRENKDARQAADSGPIAGSGGWLRRGKPARGEQVPRTGGVAEPRKAPRRGEP
LDADPSQRSRGPREPKAPRRGEPIDVDPSQRSRRPPEAKSPRRDESGEAQRPRRDPEP
RAPRRGDRPDAEQAQRSGKVVPPKKLSRRERAEAERAQRAQQARQAQQAKRGPVPPPE
TGTEWVPRPGRPEPPEPRRAPPPERDRRQPPEPPQQQPRSRP"
misc_feature 308502..>309008
/locus_tag="Caci_0273"
/note="transcription termination factor Rho; Provisional;
Region: PRK12678"
/db_xref="CDD:237171"
gene 309566..311551
/locus_tag="Caci_0274"
/db_xref="GeneID:8331601"
CDS 309566..311551
/locus_tag="Caci_0274"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: ace:Acel_1461 cell wall binding repeat 2-
containing protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111068.1"
/db_xref="GI:256389504"
/db_xref="GeneID:8331601"
/translation="MAPAGAASANAAPTNGPIAYTLSNPTAGFLWHTVNPDGSHDAVV
PVGDAGAYDGRGPGSGTNDWVNPAGNAVYSPDGSRVLFEGPDGCDYVADADGTGAVAL
TTVPAPELGCTRLTSNSDVPELSPPIPVASARGFVWSADGRSIYYDAAGSIGRISADG
RTQTKLAVTVPNGYKLLSVAPNGAMAFTDSSATAHIWILDPGATALRDLTTGRDAHYS
PTTGRLLVLDQVFPPSGQSALTIFAVDTVNGSRTQVTDPTIEFVQSFTWSPDGTQVAY
SGESPNGADRSSTGVFTRSLGGGPRKAVVLNPGVIWVTGWHNGPIAPARAADRIGGAD
RIATAVDASQWSYMNHGAGGRQASVAVISRSDQFADALGGSALAAQKGGPLLLTATSG
LDPRVREELKRVLAPGSVVYVLGGDAALSPAVEQQIKALGFTTRRLAGTDRFATSVLT
AQQVSAHPHTVMVATGVQYPDALTAGAAAAQDPNGGVVVLSDDKTLPASVKSYLSGVN
PAATKVYGVGGQGVAALKGSFPQWTGKVTPLSGADRYATAAAVASSPLFAANGPVGRI
GLATGGGWADALSGGALIATQHGPLLLTNPGSEYLPPSELSLVKALAPHLSGAVAFGG
PQALGSVATNTFVSALGGANHFFTYSNRQSPELGGAR"
misc_feature 310577..310846
/locus_tag="Caci_0274"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
misc_feature 310874..311131
/locus_tag="Caci_0274"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
misc_feature <311246..311470
/locus_tag="Caci_0274"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
gene 311616..312146
/locus_tag="Caci_0275"
/db_xref="GeneID:8331602"
CDS 311616..312146
/locus_tag="Caci_0275"
/inference="similar to AA sequence:KEGG:SAV_5729"
/note="KEGG: sma:SAV_5729 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111069.1"
/db_xref="GI:256389505"
/db_xref="GeneID:8331602"
/translation="MADYQPGLVEQARQGLGFSITEMREVNAWWQRYLRARSAPRGPE
RFRAVLGPADSEQDLRTGDLVSRLYHWTLPVWPELRFEIVVGPGGQVWQEWLVRAPGA
EPPVAPADQTLEPWQYVVGDLERMYPQVRHLPEDAPTRWQSEYGYDDGHGGVVRRRAR
FCYGLLQEVSEPLEVP"
gene complement(312132..312746)
/locus_tag="Caci_0276"
/db_xref="GeneID:8331603"
CDS complement(312132..312746)
/locus_tag="Caci_0276"
/inference="protein motif:PFAM:PF00857"
/note="PFAM: isochorismatase hydrolase;
KEGG: sco:SCO0748 hydrolase"
/codon_start=1
/transl_table=11
/product="isochorismatase hydrolase"
/protein_id="YP_003111070.1"
/db_xref="GI:256389506"
/db_xref="InterPro:IPR000868"
/db_xref="GeneID:8331603"
/translation="MALTTLDPKTALVLIDLQHGIVAPPAVPRSGAEVVACSKELADA
FRAQGLPVVLVNVAFSPDFGDAPKGRDDEEPEVDESEAEKDEEDMPADFAVIVDELGA
QDTDIRVTKHQWGAFHGTDLDTQLRRRGVTQIVLAGLVTSRGVDTTAREAYAHNYSVA
FAIDAMADRGIEVHENAIERIFPQIGQRATTKEILAMVQRLGNL"
misc_feature complement(312168..312719)
/locus_tag="Caci_0276"
/note="Isochorismatase family; Region: Isochorismatase;
pfam00857"
/db_xref="CDD:216156"
misc_feature complement(312201..312716)
/locus_tag="Caci_0276"
/note="Cysteine hydrolases; This family contains
amidohydrolases, like CSHase (N-carbamoylsarcosine
amidohydrolase), involved in creatine metabolism and
nicotinamidase, converting nicotinamide to nicotinic acid
and ammonia in the pyridine nucleotide cycle. It...;
Region: cysteine_hydrolases; cd00431"
/db_xref="CDD:238245"
misc_feature complement(order(312315..312317,312414..312416,
312699..312701))
/locus_tag="Caci_0276"
/note="catalytic triad [active]"
/db_xref="CDD:238245"
misc_feature complement(312327..312332)
/locus_tag="Caci_0276"
/note="conserved cis-peptide bond; other site"
/db_xref="CDD:238245"
gene complement(312760..314544)
/locus_tag="Caci_0277"
/db_xref="GeneID:8331604"
CDS complement(312760..314544)
/locus_tag="Caci_0277"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: mbn:Mboo_0388 major facilitator transporter"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily protein"
/protein_id="YP_003111071.1"
/db_xref="GI:256389507"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331604"
/translation="MTAPAPIRGTNHPRVENKEPSTAEGRPTGRIPLARSSDTPETRH
DTPTGSGSDTPGSGSSTPAGSRSDTPGPDTSTLAASRNDTPGSGNSTLPGSRGDTPSS
DTSTLAASRGDTPDSDNSTLAASRSDTPDSANNTPATSRSATPAFNHRLTVPLLLGAT
LNPINSSMIAIALVPIGAAFGASPAATAWLVSALYLATAIGQPVIGRLVDRFGARPLF
LTGAALVGVAGVIGAVAPSLGVLIMARVLLGFGTSAQFPAAMHTVRGEAQRTGLKTPS
GILTALSISAQSTMVIGPTLGGALIGVGGWRLVFAVNIPLALVCIALGARRLPKSAPV
QNESRIDLVGMGLFAAMLTSLLVFLMDLSVGNLYLLVIAAAMAGAFVRIELRSGEPFI
DMRVFGGNTPLLITYLRQTLTYVLTYSFIYGFTQWLEEGRGLSASAAGLVVLPTSLTA
IVVAWFTGRRNGIRSKLFAGTLSMIAASAALLALNRESAIWILIGVGLLAGATQGMNG
LANQNALFRQADAARMGTASGLLRTFQYLGAILSSAAVAIVFRTGASTVGLHELAVVM
IACGALLLAVVLADRSLSLRTENRGQSR"
misc_feature complement(<313396..314091)
/locus_tag="Caci_0277"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(312916..314082)
/locus_tag="Caci_0277"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:219516"
misc_feature complement(order(313399..313401,313411..313413,
313420..313422,313432..313434,313444..313446,
313486..313488,313495..313500,313507..313512,
313519..313521,313675..313677,313693..313698,
313705..313710,313744..313746,313762..313767,
313774..313779,313786..313791,313927..313932,
313936..313941,313951..313953,313960..313965,
313972..313974,314023..314028,314032..314040,
314047..314049))
/locus_tag="Caci_0277"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(314541..315068)
/locus_tag="Caci_0278"
/db_xref="GeneID:8331605"
CDS complement(314541..315068)
/locus_tag="Caci_0278"
/inference="protein motif:PFAM:PF01047"
/note="PFAM: regulatory protein MarR;
SMART: regulatory protein MarR;
KEGG: bmj:BMULJ_04209 MarR family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="MarR family transcriptional regulator"
/protein_id="YP_003111072.1"
/db_xref="GI:256389508"
/db_xref="InterPro:IPR000835"
/db_xref="GeneID:8331605"
/translation="MDVQPGTIALGGEDAVDGADAAHAADAVRPAGAAHPADAAHAAR
ELRVLVGRLRRRLREVDDVHELTASQLAVLGRLDRDGPASTSDLAKAEHVRPQSMAAT
IAVLEERGMIARRQDPDDGRRQLIELTPTADETVRGSRRARDEWLERALRERFSPEEL
ATVVTALGMLERLSE"
misc_feature complement(314589..314879)
/locus_tag="Caci_0278"
/note="helix_turn_helix multiple antibiotic resistance
protein; Region: HTH_MARR; smart00347"
/db_xref="CDD:197670"
misc_feature complement(314703..314873)
/locus_tag="Caci_0278"
/note="MarR family; Region: MarR; pfam01047"
/db_xref="CDD:201571"
gene 315130..316383
/locus_tag="Caci_0279"
/db_xref="GeneID:8331606"
CDS 315130..316383
/locus_tag="Caci_0279"
/EC_number="6.3.4.13"
/inference="protein motif:TFAM:TIGR00877"
/note="KEGG: sma:SAV_4149 phosphoribosylamine--glycine
ligase;
TIGRFAM: phosphoribosylamine/glycine ligase;
PFAM: phosphoribosylglycinamide synthetase; protein of
unknown function DUF201"
/codon_start=1
/transl_table=11
/product="phosphoribosylamine/glycine ligase"
/protein_id="YP_003111073.1"
/db_xref="GI:256389509"
/db_xref="InterPro:IPR000115"
/db_xref="InterPro:IPR003806"
/db_xref="InterPro:IPR011761"
/db_xref="GeneID:8331606"
/translation="MKVLVIGTGGREHALARALSTDPAVTALYCAPGNPGIAEVAELR
AVDPLDPAAVRDLAVELGADLVVVGPEAPLVAGVADPVREAGIPVFGPSKAAALLEGS
KAFSKEVMAAAGIPTAKSYVCETDAEYAKALDEFAGFPYVVKDDALAAGKGVVVTEDR
AAALEHARACGRVVIEEYLDGPEVSLFGITDGTAVVPMMPSQDFKRIGDGDTGLNTGG
MGSYCPLPWTPEGLTDEVVATVIQPLVDEMRRRGTPFVGLVYAGLALTAKGLRVVEFN
ARFGDPETQSVLAMLESPLSELLYPAATGTLADAPAPRWRDGASVTVVLAATGYPGTP
RSDDVITGIDAAEQLGTVVNQAGTKQNAEGAVVTSGGRVLAVTAVADSLGAARGKAYE
GVAAITFDGAQHRTDIAAEAAKTAA"
misc_feature 315130..316353
/locus_tag="Caci_0279"
/note="phosphoribosylamine--glycine ligase; Provisional;
Region: PRK00885"
/db_xref="CDD:234856"
misc_feature 315130..315429
/locus_tag="Caci_0279"
/note="Phosphoribosylglycinamide synthetase, N domain;
Region: GARS_N; pfam02844"
/db_xref="CDD:217251"
misc_feature 315430..315981
/locus_tag="Caci_0279"
/note="Phosphoribosylglycinamide synthetase, ATP-grasp (A)
domain; Region: GARS_A; pfam01071"
/db_xref="CDD:216282"
misc_feature 316084..316353
/locus_tag="Caci_0279"
/note="Phosphoribosylglycinamide synthetase, C domain;
Region: GARS_C; pfam02843"
/db_xref="CDD:217250"
gene 316528..317934
/locus_tag="Caci_0280"
/db_xref="GeneID:8331607"
CDS 316528..317934
/locus_tag="Caci_0280"
/inference="similar to AA sequence:KEGG:SGR_3860"
/note="KEGG: sgr:SGR_3860 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111074.1"
/db_xref="GI:256389510"
/db_xref="GeneID:8331607"
/translation="MTATTARVSAHRAARALLRVRAWVIAAYALSAAAACAALIGLAR
VRGWDGVGAGAVGAAAVVCVLWALPAIRLHRGALAPPKTVQLAGESAPELELLVRQLA
LQLQVPTPAGIELSPDCDAWLDPRPGGPVLVIGAPFLWWLRVSELRGLLAPLVAGMAA
AGDERIVRARAFANRSIGALHGRPGRTPHVFPSLRRRLAGYFEARAEVLERVVAWEAV
AASRMIEPAARAYAHEQINMAAAGWDRVLTRLAQPAWESGYCPVGLNVALVGALTSLG
RRDRMAGSLATRLSERPACDLLEEPGDVDARASRMAAELFEGRRIERTVTWERYVTAV
TEPELVRRAESVPDEHPVAKRIRTLISEAGVPGARQGGVSDGGTRSAVIPAPRVGEAD
GVPSGDVMEPDIDDFAAYLAVRLVEARLAAWGLDWLDGPVLRDRAGDPVPIHDMAASV
ADVGDVSRLSDWLARNLP"
sig_peptide 316528..316641
/locus_tag="Caci_0280"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.923) with cleavage site probability 0.850 at
residue 38"
gene 318027..318638
/locus_tag="Caci_0281"
/db_xref="GeneID:8331608"
CDS 318027..318638
/locus_tag="Caci_0281"
/inference="protein motif:TFAM:TIGR02983"
/note="TIGRFAM: RNA polymerase sigma-70 factor, sigma-E
family; RNA polymerase sigma factor, sigma-70 family;
PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain
protein; sigma-70 region 4 domain protein;
KEGG: sen:SACE_1454 RNA polymerase ECF sigma factor"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-24 subunit"
/protein_id="YP_003111075.1"
/db_xref="GI:256389511"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="InterPro:IPR014325"
/db_xref="GeneID:8331608"
/translation="MRVTRESDQHGSEQYGTDETGSITGGSGDEEFGRLVVARSHALR
RTAYLMCGDWFEAEDLVQQALIKLHAAWGRVQRHDDLDAYLRKTLLRTCIDEKRRARW
SKEHPASDAMPDTVEAPGEPDPETLSDRDELVAALRELPSGQRAVLILRFWEDLSVEE
TAQLLKCTAGTVKSQTSRGLGALREAFGVDRAGALLARTEGKA"
misc_feature 318099..318590
/locus_tag="Caci_0281"
/note="RNA polymerase sigma-70 factor, sigma-E family;
Region: SigE-fam_strep; TIGR02983"
/db_xref="CDD:132028"
misc_feature 318129..318332
/locus_tag="Caci_0281"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:218138"
misc_feature 318414..318578
/locus_tag="Caci_0281"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(318447..318449,318477..318479,318495..318500,
318528..318530,318534..318539,318543..318551,
318555..318560,318564..318566)
/locus_tag="Caci_0281"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 318635..320263
/locus_tag="Caci_0282"
/db_xref="GeneID:8331609"
CDS 318635..320263
/locus_tag="Caci_0282"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: cdf:CD3349 exosporium glycoprotein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111076.1"
/db_xref="GI:256389512"
/db_xref="GeneID:8331609"
/translation="MTLMDEGAGDCETTMGNDINDISETNETGTTSATASTAATSLTA
NDPQDTDASSVELAWAHDLFDNTRGEAEPPWAVDLAVITKAGHRRRRFRRARTGGGVL
AVLAVTTAAAVTLGAGTTDYGSSAGPAGGWGARPLQDVFRYVEVNGGSFPGNNGDLYH
HVPKSAAVDAAVLVGHLDPAGTHLRGEPDRPDGPNPRIVGDGDAWVKGAANIEMSSDW
SADGTGPTSAQVSYGFFDDVNTLRTGIAGRPVSGPCGLNMELFLGVIDPTGTTPLPQW
SGCRYTTLADGSRVAAASASVGAGTETVAVRIFGSGNVIGMLGTNYQWTAAVDGARPS
ARAVVTPSPWSEDGFRAALSDTALVPVLHPRGPVNADGKLLVPSDIGSDWAYDPTGGS
EGTGEFVLDNGCTPDHSIFGLASGRAVGYTGTLPDGTAGTGFEGEYRLPAGTGARTMQ
DAQKYGQGGCGGFSQDTVAALPSGIGDSAFLLYQPQQSTVRVTVRLGDTILQTDIGRA
DHSPLTLTSAADRTWLQQIAQRMVAHYTGVAGRG"
gene 320386..321696
/locus_tag="Caci_0283"
/db_xref="GeneID:8331610"
CDS 320386..321696
/locus_tag="Caci_0283"
/inference="protein motif:TFAM:TIGR00928"
/note="Catalyzes two discrete reactions in the de novo
synthesis of purines: the cleavage of adenylosuccinate and
succinylaminoimidazole carboxamide ribotide"
/codon_start=1
/transl_table=11
/product="adenylosuccinate lyase"
/protein_id="YP_003111077.1"
/db_xref="GI:256389513"
/db_xref="InterPro:IPR000362"
/db_xref="InterPro:IPR003031"
/db_xref="InterPro:IPR004769"
/db_xref="GeneID:8331610"
/translation="MIERYTLPEMGRVWSEAHKYELWARVETLVVEAHAAAGTIPESA
VEPVRKAAPPTPEAVAAIEAVTQHDVIAFLSAWADNTEPREAATYVHFGMTSSDLLDT
ALALQLTEATDLLLEKADKLVGVLRDHALAHRATLRVGRTHGIHGEPDVWGHRVADFA
FGVARSRDRLRRAREAVGVVAISGAVGTYSNIDPAIETFVAAKLGMTAADVSTQVILR
DGVSEWVSALAIMATVLEAIALEVRHGQRTEVRELWEPFGKGQKGSSAMPHKKNPIIS
ERLAGLARIVRAQVVPVMEGIPLWHERDISHSSTERIALPDASIAVDYMLNLTIRLMS
GLVVDPDRMRHNLDSTGGLVYSSTVLLELVEMGLERDTQAYPLTQRASMKTWETGRPF
RETLREEAATAGLAIDEARLDEATRPERFVQRLDGMFEKLAKLS"
misc_feature 320386..321678
/locus_tag="Caci_0283"
/note="adenylosuccinate lyase; Provisional; Region:
PRK07492"
/db_xref="CDD:181000"
misc_feature 320395..321525
/locus_tag="Caci_0283"
/note="Adenylsuccinate lyase (ASL)_subgroup 1; Region:
Adenylsuccinate_lyase_1; cd01360"
/db_xref="CDD:176464"
misc_feature order(320428..320433,320590..320592,320617..320619,
320650..320655,320659..320664,320806..320823,
320827..320829,320845..320850,320857..320859,
320866..320871,320887..320892,320908..320910,
320938..320949,320956..320958,320962..320964,
321010..321012,321016..321021,321040..321042,
321052..321054,321073..321075,321094..321096,
321106..321108,321112..321117,321121..321126,
321196..321201,321214..321216,321226..321228,
321235..321240,321244..321249,321256..321261,
321268..321276,321280..321303,321310..321315,
321319..321324,321334..321336,321454..321456,
321466..321468,321475..321480,321493..321498)
/locus_tag="Caci_0283"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176464"
misc_feature order(320587..320589,320656..320658,320812..320814,
321025..321027,321193..321195,321199..321201,
321214..321216)
/locus_tag="Caci_0283"
/note="active site"
/db_xref="CDD:176464"
misc_feature 321436..321681
/locus_tag="Caci_0283"
/note="Adenylosuccinate lyase C-terminus; Region: ADSL_C;
smart00998"
/db_xref="CDD:198066"
gene 322799..322996
/locus_tag="Caci_0284"
/db_xref="GeneID:8331611"
CDS 322799..322996
/locus_tag="Caci_0284"
/inference="similar to AA sequence:KEGG:SACE_3261"
/note="KEGG: sen:SACE_3261 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111078.1"
/db_xref="GI:256389514"
/db_xref="GeneID:8331611"
/translation="MVRINLRLPSNLKALVEDAAGAAGLSVNAWIVRAAAAGLANEDR
RAGRAQRSDRIVGDSYSGWAR"
misc_feature <322805..322900
/locus_tag="Caci_0284"
/note="HicB family; Region: HicB; pfam05534"
/db_xref="CDD:114265"
gene 323059..323949
/locus_tag="Caci_0285"
/db_xref="GeneID:8331612"
CDS 323059..323949
/locus_tag="Caci_0285"
/inference="similar to AA sequence:KEGG:RHA1_ro02601"
/note="KEGG: rha:RHA1_ro02601 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111079.1"
/db_xref="GI:256389515"
/db_xref="GeneID:8331612"
/translation="MSHSTFNTPAAIAVALDLYVADVRIVAADRADTVVEVRPSDPNK
AADVKAAENTRVEYDEGARVLSIVSRKPRNRFVNFSSKRPESIDLLIEVPTDSDVRGE
TEIGDFESVGVLGAVQLKAGVGTVRLAQVGPVNIRDGVGEVLIEEVSGAADVNCGSGV
IRLGAVDGTAEVSNGNGKVRVGVVTGAANVKSANGEVSVDRALSDITASASNGEVRVG
EVVRGKATVTSKNGAVEVGVREGSAAWLELSTAVGRVYNELESADAPQAGEPVDKVEI
HASTKLGDVTIRRVPRLDED"
gene 323955..324878
/locus_tag="Caci_0286"
/db_xref="GeneID:8331613"
CDS 323955..324878
/locus_tag="Caci_0286"
/inference="protein motif:TFAM:TIGR01188"
/note="KEGG: sco:SCO4405 ABC transporter ATP-binding
protein;
TIGRFAM: daunorubicin resistance ABC transporter ATPase;
PFAM: ABC transporter;
SMART: ATPase AAA"
/codon_start=1
/transl_table=11
/product="daunorubicin resistance ABC transporter ATPase"
/protein_id="YP_003111080.1"
/db_xref="GI:256389516"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR005894"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:8331613"
/translation="MIAISARGLRKSFGEKTVLDGIDLSVPAGTILALLGPNGAGKTT
AVHLLTTYLRPDAGEIVIAGHDLAKSPQAVRRVIGVTGQFSAVDGYLTGRENLMLMAD
LHLLPKAVGRQRADDLLERFELTEAAGKAAATCSGGMKRKLDLAMTLVGDPKVIFLDE
PTTGLDPRSRRVMWDIIRGLVAEGTTILLTTQYLDEADQLAHRVAVLDGGRIVAEGTP
AELKTRIPGGHIELTFADRAELDAAALVLAPTHRDDDALTLQLAGDGRVSALRSLLQR
LDDASVEVEALAVHTPDLDDVFFALTGKKGA"
misc_feature 323964..324620
/locus_tag="Caci_0286"
/note="ATP-binding cassette transporter nucleotide-binding
domain; Region: ABC_ATPase; cl17201"
/db_xref="CDD:247755"
misc_feature 323985..324863
/locus_tag="Caci_0286"
/note="daunorubicin resistance ABC transporter ATP-binding
subunit; Region: drrA; TIGR01188"
/db_xref="CDD:130256"
misc_feature 324060..324083
/locus_tag="Caci_0286"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature order(324069..324074,324078..324086,324201..324203,
324429..324434,324528..324530)
/locus_tag="Caci_0286"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature 324192..324203
/locus_tag="Caci_0286"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature 324357..324386
/locus_tag="Caci_0286"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature 324417..324434
/locus_tag="Caci_0286"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature 324441..324452
/locus_tag="Caci_0286"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature 324516..324536
/locus_tag="Caci_0286"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene 324880..325734
/locus_tag="Caci_0287"
/db_xref="GeneID:8331614"
CDS 324880..325734
/locus_tag="Caci_0287"
/inference="protein motif:PFAM:PF01061"
/note="PFAM: ABC transporter;
KEGG: rha:RHA1_ro02603 multidrug ABC transporter permease"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_003111081.1"
/db_xref="GI:256389517"
/db_xref="InterPro:IPR000412"
/db_xref="InterPro:IPR013525"
/db_xref="GeneID:8331614"
/translation="MSAMTVADSGLADTGADTRSHAWVHARIMLRRNLRHLQRYPSLT
LMVTLMPLVFLLLFVYVFGGTLGSGLGSLTPAGVHGGRAAYAAYVAPAIIVMAVAAAA
QGTAIAVAQDMTEGIIARFRTMAVARSSVLTGHVVGAAIQTMAGVAVVVGAALAVGFR
PHANAAEWFAALGVVLLLTFAVTWLCVGLGLSAKSVETASNSPMFLLLLPFLSSGFVP
TDSLPTGMRWFSEYEPFTPVTETLRGLLTGTRIGGDLVVTLAWCLGVAVLSYAWSRRL
YEREPKQS"
gene 325731..326642
/locus_tag="Caci_0288"
/db_xref="GeneID:8331615"
CDS 325731..326642
/locus_tag="Caci_0288"
/EC_number="6.3.2.6"
/inference="protein motif:TFAM:TIGR00081"
/note="KEGG: fra:Francci3_4373
phosphoribosylaminoimidazole-succinocarboxamide synthase;
TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide
synthase;
PFAM: SAICAR synthetase"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole-succinocarboxamide
synthase"
/protein_id="YP_003111082.1"
/db_xref="GI:256389518"
/db_xref="InterPro:IPR001636"
/db_xref="GeneID:8331615"
/translation="MNRRYSERVITGLNHLASGKIRDLYAVGDDLLLVASDKISAFDY
VLESEIPDKGRILTQLSMWWFRQLADLVPNHVISADVEQFPAELQPYKEELRGRSMLC
RKLSMVQVECVARGYLTGSGLAEYERTRTANGVPLPPGLVDGSRLDRPIFTPAMKAEV
GQHDENVSFEDMAERIGDPELAAQLKDLTLAVYSRAREIAEERGIILADTKFEFGRLR
GGTLVLADEVLTPDSSRFWPADEWKPGRTQSSFDKQYVRDWLSSPASGWDRKSDTPPP
VLPEEVVQATRARYVEAYERLTGAKFD"
misc_feature 325773..326627
/locus_tag="Caci_0288"
/note="non-metazoan
5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide
(SAICAR) synthase; Region: SAICAR_synt_Sc; cd01414"
/db_xref="CDD:133469"
misc_feature order(325776..325781,325785..325790,325794..325796,
325800..325805,325821..325823,325827..325829,
325953..325955,326037..326039,326043..326045,
326049..326051,326199..326201,326367..326369,
326403..326408)
/locus_tag="Caci_0288"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:133469"
misc_feature order(325779..325781,325785..325796,325800..325802,
325821..325823,325857..325859,325956..325958,
326034..326045,326049..326051,326061..326063,
326067..326069,326073..326075,326085..326093,
326193..326195,326199..326201,326220..326222,
326355..326363,326367..326369,326406..326408,
326424..326435)
/locus_tag="Caci_0288"
/note="active site"
/db_xref="CDD:133469"
misc_feature order(325857..325859,326061..326063,326067..326069,
326073..326075,326085..326093,326193..326195,
326220..326222,326355..326363,326424..326435)
/locus_tag="Caci_0288"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133469"
gene 326749..327015
/locus_tag="Caci_0289"
/db_xref="GeneID:8331616"
CDS 326749..327015
/locus_tag="Caci_0289"
/inference="protein motif:TFAM:TIGR00302"
/note="TIGRFAM: phosphoribosylformylglycinamidine
synthase, purS;
PFAM: phosphoribosylformylglycinamidine synthetase PurS;
KEGG: sco:SCO4077 phosphoribosylformylglycinamidine
synthase subunit PurS"
/codon_start=1
/transl_table=11
/product="phosphoribosylformylglycinamidine synthase PurS"
/protein_id="YP_003111083.1"
/db_xref="GI:256389519"
/db_xref="InterPro:IPR003850"
/db_xref="GeneID:8331616"
/translation="MARVLVDVMLKPEILDPQGQAVQRALPRMGFDSVTNVRQGKRFE
LELADADPATLRATAEQMAEKLLANTVIEDFKVTVLPADSSENA"
misc_feature 326752..326991
/locus_tag="Caci_0289"
/note="phosphoribosylformylglycinamidine synthase subunit
PurS; Reviewed; Region: PRK05974"
/db_xref="CDD:235659"
gene 327015..327701
/locus_tag="Caci_0290"
/db_xref="GeneID:8331617"
CDS 327015..327701
/locus_tag="Caci_0290"
/EC_number="6.3.5.3"
/inference="protein motif:TFAM:TIGR01737"
/note="KEGG: sma:SAV_4139
phosphoribosylformylglycinamidine synthase subunit I;
TIGRFAM: phosphoribosylformylglycinamidine synthase I;
PFAM: CobB/CobQ domain protein glutamine amidotransferase"
/codon_start=1
/transl_table=11
/product="phosphoribosylformylglycinamidine synthase I"
/protein_id="YP_003111084.1"
/db_xref="GI:256389520"
/db_xref="InterPro:IPR010075"
/db_xref="InterPro:IPR011698"
/db_xref="GeneID:8331617"
/translation="MPARIGVVTFPGTLDDRQALRAAAAVGAEPVALWHKDRDLHQVD
AVVLPGGFSYGDYLRAGAIARFSPVMDTIIDAARDGLPVLGICNGFQVLCETHLLEGA
MIRNGDLHFINRDVTLRIENNRTAWTSDYEDGAEAVIPIKNVDGRFVADEPTLDALEA
EGRVLARYVANPNGAARDIAGITNAAGNVVGLMPHPEYAIDDLTGPHPGPGTDGLPFF
TSILKSLVSA"
misc_feature 327024..327686
/locus_tag="Caci_0290"
/note="phosphoribosylformylglycinamidine synthase I;
Provisional; Region: PRK03619"
/db_xref="CDD:235140"
misc_feature 327027..327680
/locus_tag="Caci_0290"
/note="Type 1 glutamine amidotransferase (GATase1)-like
domain found in Formylglycinamide ribonucleotide
amidotransferase; Region: GATase1_FGAR_AT; cd01740"
/db_xref="CDD:153211"
misc_feature order(327165..327170,327180..327182,327273..327275,
327285..327287,327438..327443,327591..327593,
327597..327608)
/locus_tag="Caci_0290"
/note="putative active site [active]"
/db_xref="CDD:153211"
misc_feature order(327273..327275,327597..327599,327603..327605)
/locus_tag="Caci_0290"
/note="catalytic triad [active]"
/db_xref="CDD:153211"
gene 327698..330061
/locus_tag="Caci_0291"
/db_xref="GeneID:8331618"
CDS 327698..330061
/locus_tag="Caci_0291"
/EC_number="6.3.5.3"
/inference="protein motif:TFAM:TIGR01736"
/note="catalyzes the formation of
2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from
N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and
L-glutamine in purine biosynthesis"
/codon_start=1
/transl_table=11
/product="phosphoribosylformylglycinamidine synthase II"
/protein_id="YP_003111085.1"
/db_xref="GI:256389521"
/db_xref="InterPro:IPR000728"
/db_xref="InterPro:IPR010074"
/db_xref="InterPro:IPR010918"
/db_xref="GeneID:8331618"
/translation="MSNGNSSENVFDTTDVFVDTAVSFDTVAKAAQTPDVKQPFRELG
MTEDEYLRVREILGRRPSSSELAMYSVMWSEHCSYKSSRVHLKQFGEKAPKTAALLVG
PGENAGVVDVGEGLAVTFKVESHNHPSYVEPYQGAATGVGGIVRDILTMGARPIAVMD
PLRFGPADAPDTARVLPGVVAGVGGYGNCLGVPNIGGEIVFDPCYLGNPLVNALCVGV
MRADEIKLAKAPGPGNQVILFGARTGGDGIGGASVLASATFDEDGPAKRPSVQVGDPF
MEKVLIECCLEIFAADLVVGIQDLGAAGLTCSTTELAAAGTGGMDVRLDLAPLRDSTL
TPEEVLMSESQERMMAVVEPAKVEAFLAVCDKWDVTATALGEVTDTGRLRMWWHGEII
VDVPPRTLAHEGPVYNRPFARPEWQDALQADAPTAERLKRPGNAEELRETLLRLVGSP
NLADKTWAVEQYDHRVQGNTVLGHGEDSGMVRLDAALPGTSLGVALSTDGNGRFAKLD
PYQGAQLALAEAYRNVAATGAKPLAVTDCLNFGSPEDPDVMWQFAEACRGLADACLEL
GTPVTGGNVSFYNQTGELNIHPTPVVGVLGVIDDVDRRTRSAFEREGEILLLLGDTRD
EFGGSEWAHEVHGHLGGLPPRLDLQREKVLGEVLIAGSRDGMLSAAHDLSDGGLAQAV
VEGCLRGGHGARLVLPETDADGAALDPFVALFAESAGRALVAVPRSEELRFTDMCVAR
GLPVARVGVVDGDVLEVQGQFTVPMAELRTAHEAPFRKLFGHSVVDA"
misc_feature 327794..330043
/locus_tag="Caci_0291"
/note="phosphoribosylformylglycinamidine synthase II;
Provisional; Region: PRK01213"
/db_xref="CDD:234921"
misc_feature 327890..328882
/locus_tag="Caci_0291"
/note="PurL subunit of the formylglycinamide
ribonucleotide amidotransferase (FGAR-AT), first repeat.
FGAR-AT catalyzes the ATP-dependent conversion of
formylglycinamide ribonucleotide (FGAR) and glutamine to
formylglycinamidine ribonucleotide (FGAM), ADP; Region:
PurL_repeat1; cd02203"
/db_xref="CDD:100034"
misc_feature order(328046..328057,328061..328063,328136..328138,
328166..328168,328175..328177,328184..328186,
328289..328291,328322..328327,328337..328339)
/locus_tag="Caci_0291"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100034"
misc_feature order(328124..328126,328136..328138,328283..328291)
/locus_tag="Caci_0291"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100034"
misc_feature 329126..329947
/locus_tag="Caci_0291"
/note="PurL subunit of the formylglycinamide
ribonucleotide amidotransferase (FGAR-AT), second repeat.
FGAR-AT catalyzes the ATP-dependent conversion of
formylglycinamide ribonucleotide (FGAR) and glutamine to
formylglycinamidine ribonucleotide (FGAM), ADP; Region:
PurL_repeat2; cd02204"
/db_xref="CDD:100035"
misc_feature order(329174..329185,329189..329191,329264..329266,
329300..329302,329309..329311,329318..329320,
329417..329419,329459..329464,329474..329476)
/locus_tag="Caci_0291"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100035"
misc_feature order(329252..329254,329264..329266,329411..329419)
/locus_tag="Caci_0291"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100035"
gene complement(330071..330865)
/locus_tag="Caci_0292"
/db_xref="GeneID:8331619"
CDS complement(330071..330865)
/locus_tag="Caci_0292"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: lic:LIC12006 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111086.1"
/db_xref="GI:256389522"
/db_xref="GeneID:8331619"
/translation="MAWFVHLTPEKNSARVRRSGLSPISRSRSDDPRPGLYCTPLLAD
YTLTYQWSREIKRWKSPRLAAVHFRIPDDTAVTVGYYGDAPKPVTAAQAVARFLSLSP
EEMRGYEVFLPRGVTAKEIRRIKSLERPIGWRYRPNAHGHRPCACPACLDRGEYRISR
IRDKSSYYDTSHLPPRQEVLEKLATTRDSAEIVTLLDQLRSRGQGDIFRVAHLADHPD
PDVREALAYALCGFNKKAAAELLEKLRSDPLKDVREAAGADEDDDL"
misc_feature complement(330098..330328)
/locus_tag="Caci_0292"
/note="HEAT repeats; Region: HEAT_2; pfam13646"
/db_xref="CDD:222285"
gene complement(330896..331846)
/locus_tag="Caci_0293"
/db_xref="GeneID:8331620"
CDS complement(330896..331846)
/locus_tag="Caci_0293"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sco:SCO2835 membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111087.1"
/db_xref="GI:256389523"
/db_xref="InterPro:IPR016160"
/db_xref="GeneID:8331620"
/translation="MNTETTATGASFYALGPEFEWMASAWDGFAHELAEVSKTLRQIV
EAATADPQLAAESSGLAALESATDRLVRELVDDAARIRRTQATYEHADATVHASVPPL
HAHEQPPPGHAPEVSTIPVFGAGVVTGHQNTPGSAPGSDTAGSYAGTLDGPASAPASV
PVPDGSGLWHPAVAQDLSETALGTLSRMRRQMIAHADRWVSQHVPYNQGIWHEGYRTD
CSGYVSMCWGLRDSMVTSTMPQISHRIAKEDLRPGDVLLNTDVATGHVILFDRWADYA
HNSYVGYELCPQGTLHHVIPYPYYSGFGVYEPYRYNNAGD"
gene complement(331843..332277)
/locus_tag="Caci_0294"
/db_xref="GeneID:8331621"
CDS complement(331843..332277)
/locus_tag="Caci_0294"
/inference="similar to AA sequence:KEGG:M446_6942"
/note="KEGG: met:M446_6942 chromosome segregation protein
SMC"
/codon_start=1
/transl_table=11
/product="chromosome segregation protein SMC"
/protein_id="YP_003111088.1"
/db_xref="GI:256389524"
/db_xref="GeneID:8331621"
/translation="MITAQTPASAPTDDAGRTPERAAMAGAIDAQARRMDQLSAAIVR
ATSQVTWSGRAAERFRARAAERSRECLQLAVALRASAERVHAAETARPAATHAGQAPA
DEKSGHAAVVGAISGMAGTKIPGVAGGGVGGARPSSESGPAR"
gene 332467..333234
/locus_tag="Caci_0295"
/db_xref="GeneID:8331622"
CDS 332467..333234
/locus_tag="Caci_0295"
/inference="similar to AA sequence:KEGG:SAV_4137"
/note="KEGG: sma:SAV_4137 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111089.1"
/db_xref="GI:256389525"
/db_xref="InterPro:IPR017517"
/db_xref="GeneID:8331622"
/translation="MPKTRRPASAKVRQAVVNQWQAHVGYAAALTAEQLAAPSKLAGW
DVKTLVGHVAFTVRTVVTRAAEPVAGDQAEVYDWLTATPTASAAVDAGTRELVEDGVV
LADEVTEAEKLMERYGDEDLIAMRFGPMRFDDFLVSRIVEATVHADDLERSTGIEFPH
DREALAITVRQLADAMAAKVPGNSVELRVPPFAAVQCVPGPRHTRGTPPNVVEMTPRT
WIRLAAGRMTWDEAMDQALVSASGQRADLKEFLPLMG"
misc_feature 332578..333144
/locus_tag="Caci_0295"
/note="uncharacterized Actinobacterial protein TIGR03083;
Region: TIGR03083"
/db_xref="CDD:234103"
gene 333393..334910
/locus_tag="Caci_0296"
/db_xref="GeneID:8331623"
CDS 333393..334910
/locus_tag="Caci_0296"
/inference="protein motif:TFAM:TIGR01134"
/note="Catalyzes first step of the de novo purine
nucleotide biosynthetic pathway"
/codon_start=1
/transl_table=11
/product="amidophosphoribosyltransferase"
/protein_id="YP_003111090.1"
/db_xref="GI:256389526"
/db_xref="InterPro:IPR000583"
/db_xref="InterPro:IPR000836"
/db_xref="InterPro:IPR005854"
/db_xref="GeneID:8331623"
/translation="MIHPSGFRPGDGRLTHELDPQDTGPQDACGVFGVWAPGEEVAKL
AYFGLYALQHRGQESAGIAVSNGKQILVYKDMGLVSQVFDEATLQSLQGYLAIGHARY
STTGSSVWENAQPTFRATAHGAVALGHNGNLTNTGELARLAAERRTTSGAGDKHAMTS
DTGLMTELLASYSDRSLEDAAAEVLPQLRGAFSLVFMDETTLYAARDPQGVRPLMLGR
LDRGWVVASEQAALDTVGASFIREIEPGELIAVDENGLRSRHFAEPQPKGCVFEYVYL
ARPDATISGRNVHAARVEMGRTLAREAPVEADLVIATPESGTPAAIGFAEESGIPFGQ
GFVKNAYVGRTFIQPSQTLRQLGVRLKLNALREVIEGKRLVVVDDSIVRGNTQRAVSK
MLREAGATEVHLRISSPPVKWPCFYGIDFATRAELIANGLNTDEIAKSIGADSLAYIT
LDGMTAATHQPADRLCRACFDGVYPIALPEDELLGKHLLEISVDPLAHTDALSRP"
misc_feature 333408..334907
/locus_tag="Caci_0296"
/note="amidophosphoribosyltransferase; Provisional;
Region: PRK07847"
/db_xref="CDD:236113"
misc_feature 333477..334241
/locus_tag="Caci_0296"
/note="Glutamine amidotransferases class-II (GN-AT)_GPAT-
type. This domain is found at the N-terminus of glutamine
phosphoribosylpyrophosphate (Prpp) amidotransferase
(GPATase) . The glutaminase domain catalyzes amide
nitrogen transfer from glutamine to the...; Region:
GPATase_N; cd00715"
/db_xref="CDD:238367"
misc_feature order(333477..333479,333555..333560,333693..333695,
333780..333785,333873..333875)
/locus_tag="Caci_0296"
/note="active site"
/db_xref="CDD:238367"
misc_feature order(333528..333533,333540..333542,333561..333563,
333744..333746,333879..333881,333888..333893,
333900..333902)
/locus_tag="Caci_0296"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:238367"
misc_feature 334275..334655
/locus_tag="Caci_0296"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature order(334332..334334,334338..334340,334524..334532,
334536..334550,334623..334625)
/locus_tag="Caci_0296"
/note="active site"
/db_xref="CDD:206754"
gene 334959..336044
/locus_tag="Caci_0297"
/db_xref="GeneID:8331624"
CDS 334959..336044
/locus_tag="Caci_0297"
/EC_number="6.3.3.1"
/inference="protein motif:TFAM:TIGR00878"
/note="catalyzes the formation of
1-(5-phosphoribosyl)-5-aminoimidazole from
2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in
purine biosynthesis"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole synthetase"
/protein_id="YP_003111091.1"
/db_xref="GI:256389527"
/db_xref="InterPro:IPR000728"
/db_xref="InterPro:IPR004733"
/db_xref="InterPro:IPR010918"
/db_xref="GeneID:8331624"
/translation="MSGATYAAAGVDIEAGDRAVELMKEWVAKTRRPEVLGGIGGFAG
LFDASALKAYDRPLLATSTDGVGTKVAIAQRMDRHDTIGRDLVGMVVDDLVVCGAEPL
FMTDYIATGKVVPEVIAGIVKGIAEGCVLAGCALVGGETAEHPGLLKPGEYDVAGAGT
GVVEADKVLGAERVREGDVLVAMASSGAHSNGYSLLRHVFFDVAGWELDRDVPEFGRT
LGEELLEPTRIYSLDCLALIEAAEVHAISHITGGGVAANIARIIPAGLEARLDRGTWT
PPAVFGTVGALGGVATLELEKTLNMGVGMVAVLPAASVDPALALLNARGLPSWVCGEV
VASEGAVTVGGAKGGDGAASLHGDYAG"
misc_feature 334971..335960
/locus_tag="Caci_0297"
/note="phosphoribosylaminoimidazole synthetase;
Provisional; Region: PRK05385"
/db_xref="CDD:235439"
misc_feature 335067..335963
/locus_tag="Caci_0297"
/note="PurM (Aminoimidazole Ribonucleotide [AIR]
synthetase), one of eleven enzymes required for purine
biosynthesis, catalyzes the conversion of
formylglycinamide ribonucleotide (FGAM) and ATP to AIR,
ADP, and Pi, the fifth step in de novo purine
biosynthesis; Region: PurM; cd02196"
/db_xref="CDD:100032"
misc_feature order(335082..335096,335130..335141,335145..335147,
335151..335153,335169..335171,335235..335237,
335247..335249,335265..335267,335274..335276,
335283..335285,335376..335378,335388..335390,
335394..335396,335415..335420,335430..335432,
335736..335738)
/locus_tag="Caci_0297"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100032"
misc_feature order(335235..335237,335370..335378)
/locus_tag="Caci_0297"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:100032"
gene complement(336315..336587)
/locus_tag="Caci_0298"
/db_xref="GeneID:8331625"
CDS complement(336315..336587)
/locus_tag="Caci_0298"
/inference="similar to AA sequence:KEGG:SCO4088"
/note="KEGG: sco:SCO4088 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111092.1"
/db_xref="GI:256389528"
/db_xref="GeneID:8331625"
/translation="MGRGRAKAKQTRVARDLKYRDVRTDLTQLQRELQQDGVHTSNGH
SAEAPSQQDDDADDDELYAKYADDDGDDDYDSADDGGAHRSHHRRS"
misc_feature complement(<336489..336584)
/locus_tag="Caci_0298"
/note="Protein of unknown function (DUF3073); Region:
DUF3073; pfam11273"
/db_xref="CDD:151714"
gene complement(336830..337918)
/locus_tag="Caci_0299"
/db_xref="GeneID:8331626"
CDS complement(336830..337918)
/locus_tag="Caci_0299"
/inference="protein motif:PFAM:PF02812"
/note="PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation
region; Glu/Leu/Phe/Val dehydrogenase;
KEGG: saq:Sare_0168 Glu/Leu/Phe/Val dehydrogenase
dimerisation region"
/codon_start=1
/transl_table=11
/product="glu/Leu/Phe/Val dehydrogenase dimerisation
region"
/protein_id="YP_003111093.1"
/db_xref="GI:256389529"
/db_xref="InterPro:IPR006095"
/db_xref="InterPro:IPR006096"
/db_xref="InterPro:IPR006097"
/db_xref="GeneID:8331626"
/translation="MSDKPDNDVSEVFASDHEQVVYCRDEETGLKAIIAVHNTLLGPG
LGGTRFFPYATEQDALKDVLRLSRGMSYKNALAGLDLGGGKAVIIGDPSEIKTEALLR
AYGRFVQSLNGRYYTACDVGTYVQDMDVVAKESRFVTGRSMESGGAGDSSVLTAYGVF
QGMRASAEYLWGSPSLAGKRVGISGVGKVGRYLIGHLIEDGASIVATDPYEGAIQWLR
DNYAQVELVSTTEDLIAADIDVYAPCALGGALDDATVAALTAKIVCGAANNQLAHTGV
EKQLEARGILYAPDYLVNSGGVIQVADEIHGFDFERAKRRASGIFDTTMRIYSLASEE
GVPPSVAADRLAERRMRDVGRLRGVYLP"
misc_feature complement(336839..337876)
/locus_tag="Caci_0299"
/note="Glutamate dehydrogenase/leucine dehydrogenase
[Amino acid transport and metabolism]; Region: GdhA;
COG0334"
/db_xref="CDD:223411"
misc_feature complement(337502..337870)
/locus_tag="Caci_0299"
/note="Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
Region: ELFV_dehydrog_N; pfam02812"
/db_xref="CDD:202408"
misc_feature complement(336863..337468)
/locus_tag="Caci_0299"
/note="NAD(P) binding domain of leucine dehydrogenase,
phenylalanine dehydrogenase, and valine dehydrogenase;
Region: NAD_bind_Leu_Phe_Val_DH; cd01075"
/db_xref="CDD:133444"
misc_feature complement(order(337115..337117,337121..337123,
337184..337189,337280..337282,337292..337297,
337352..337360,337364..337366))
/locus_tag="Caci_0299"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:133444"
misc_feature complement(337025..337027)
/locus_tag="Caci_0299"
/note="Phe binding site; other site"
/db_xref="CDD:133444"
gene 338165..339100
/locus_tag="Caci_0300"
/db_xref="GeneID:8331627"
CDS 338165..339100
/locus_tag="Caci_0300"
/inference="similar to AA sequence:KEGG:SCO4090"
/note="KEGG: sco:SCO4090 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111094.1"
/db_xref="GI:256389530"
/db_xref="GeneID:8331627"
/translation="MRASPGGAIPAPYMAYLRVYEPLAAFPAGERAEWEAWLLRNPEP
KSLAEEQSASLRGLVAVPPIAVPENESRVAYVLDNGETTLLCPWQSRLRSWLALTELR
AVHGDGGVRLFWPRGVLERADSEYERWWAEDPEALPHILTASWQVPIRWLVLFGLEDA
VTDADGPGDRSDRGDRGEAGEGDEKVAAVTLQFRTAMSQARKRCARALRVLKRSLGAG
PLVEAVETLGMWLEEFHPHSVVELDYGGLMGLLVAQGALGAEERVDGIVLDCSVRYVA
DGLAALAQGDDTGVTAAYLRYRAKWDAVRVLARAN"
gene 339500..339703
/locus_tag="Caci_0301"
/db_xref="GeneID:8331628"
CDS 339500..339703
/locus_tag="Caci_0301"
/inference="protein motif:TFAM:TIGR01764"
/note="TIGRFAM: DNA binding domain protein, excisionase
family;
PFAM: regulatory protein MerR;
KEGG: sgr:SGR_3882 MerR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="DNA binding domain-containing protein"
/protein_id="YP_003111095.1"
/db_xref="GI:256389531"
/db_xref="InterPro:IPR000551"
/db_xref="InterPro:IPR010093"
/db_xref="GeneID:8331628"
/translation="MTARTPDAEPLLTPAEVATMFRVDPKTVTRWAKAGKLTSIRTLG
GHRRYREQEVRALLNGIPPQREG"
misc_feature 339533..339673
/locus_tag="Caci_0301"
/note="Helix-Turn-Helix DNA binding domain of truncated
MerR-like proteins; Region: HTH_MerR-trunc; cd04762"
/db_xref="CDD:133390"
misc_feature order(339536..339544,339584..339586,339632..339640)
/locus_tag="Caci_0301"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:133390"
gene complement(340009..341532)
/locus_tag="Caci_0302"
/db_xref="GeneID:8331629"
CDS complement(340009..341532)
/locus_tag="Caci_0302"
/EC_number="3.2.1.17"
/inference="protein motif:PRIAM:3.2.1.17"
/note="KEGG: fre:Franean1_6988 lysozyme;
PFAM: cellulose-binding family II;
SMART: cellulose-binding family II"
/codon_start=1
/transl_table=11
/product="lysozyme"
/protein_id="YP_003111096.1"
/db_xref="GI:256389532"
/db_xref="InterPro:IPR001919"
/db_xref="GeneID:8331629"
/translation="MGLSKRARVIGISLATAAVVGAGAVAAFSAGAAGSSSGSVTAAF
AKTSDWGTGFQGQYTIANSTGQTVHGWTVSFDLPSGERISSLWNGTMTAAGQHITVAN
PTWAGDIATGTSATFGFVVDATSGSTAPQNCLVNGASCDGGTPGGGQSSAPGGAPSTA
PGSSSAPSSAPSSAPSSVPSSAPSSAPSSAPSSVPPPPASSGSYSFAPYVDTSQRQDL
GAIATAAGAKDVTAAFMLAGGSGCTPAWNGSADAGFEGALKAGVADLRAKGGDVIASF
GGANGTELAGACKDVPSLKAAYKSVIDAYNLTHVDFDIEGAATTDQASITRRAQALAQ
LQADYAAAGKTLDVSLTLPVLPSGLTQDGVNIVTAAATNNLKISVVNVMAMDFGDWAA
PSPSGKMGQYADQSAQSVHDQLKSVYPGATDAQLWSMVGITPMIGVNDTSDEVFQVSD
ASVVEQFAAQHHIGRLAMWSLTRDQACAQPSSWASPTCSSIQQNTYDFAHTFEAFTG"
sig_peptide complement(341395..341532)
/locus_tag="Caci_0302"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.363 at
residue 46"
misc_feature complement(341113..341397)
/locus_tag="Caci_0302"
/note="Cellulose binding domain; Region: CBM_2; pfam00553"
/db_xref="CDD:215990"
misc_feature complement(340027..340923)
/locus_tag="Caci_0302"
/note="PF-ChiA is an uncharacterized chitinase found in
the hyperthermophilic archaeon Pyrococcus furiosus with a
glycosyl hydrolase family 18 (GH18) catalytic domain as
well as a cellulose-binding domain. Members of this
domain family are found not only in...; Region:
GH18_PF-ChiA-like; cd06543"
/db_xref="CDD:119360"
misc_feature complement(order(340126..340128,340228..340230,
340375..340380,340588..340590,340594..340596,
340600..340602,340708..340710,340831..340833,
340906..340908))
/locus_tag="Caci_0302"
/note="active site"
/db_xref="CDD:119360"
gene complement(341687..342703)
/locus_tag="Caci_0303"
/db_xref="GeneID:8331630"
CDS complement(341687..342703)
/locus_tag="Caci_0303"
/inference="protein motif:PFAM:PF02322"
/note="PFAM: cytochrome bd ubiquinol oxidase subunit II;
KEGG: fre:Franean1_6579 cytochrome d ubiquinol oxidase
subunit II"
/codon_start=1
/transl_table=11
/product="cytochrome bd ubiquinol oxidase subunit II"
/protein_id="YP_003111097.1"
/db_xref="GI:256389533"
/db_xref="InterPro:IPR001680"
/db_xref="InterPro:IPR003317"
/db_xref="GeneID:8331630"
/translation="MTAVDLLLGVIVCALAAYALLAGADFGAGVWDLLARGRHADRER
RLIAHALGPVWEANHVWLIFVIVATFSGFPTAFGIIARGLELPLALALAGIVLRGAAY
VYRAYGEGAAGPDSLWSRVFAVASSITPFMLGVSGAALATGKITATSGPLTPFDSPFT
LVAGVFAVVVTAFLAAVYLCHDAGTDPETEDLVPAFRRRALGAAAVAGVVSMALLPLL
YQDAPIVAHRFTERSIPFVAVAVVCGFGSLAVIWKRHYVLARATAATAVIGVLLGWAA
AQYPDLAVGAATARGSAAGPANLHALLIAMGFGMVVILPAFYLLLKVFSGPEGAAGGS
GLAN"
sig_peptide complement(342629..342703)
/locus_tag="Caci_0303"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.971) with cleavage site probability 0.409 at
residue 25"
misc_feature complement(<342275..342589)
/locus_tag="Caci_0303"
/note="cytochrome d ubiquinol oxidase subunit 2;
Provisional; Region: PRK15003; cl12219"
/db_xref="CDD:187194"
misc_feature complement(341732..342583)
/locus_tag="Caci_0303"
/note="Cytochrome oxidase subunit II; Region: Cyto_ox_2;
pfam02322"
/db_xref="CDD:216972"
gene complement(342700..344181)
/locus_tag="Caci_0304"
/db_xref="GeneID:8331631"
CDS complement(342700..344181)
/locus_tag="Caci_0304"
/inference="protein motif:PFAM:PF01654"
/note="PFAM: cytochrome bd ubiquinol oxidase subunit I;
KEGG: fre:Franean1_6580 cytochrome bd ubiquinol oxidase
subunit I"
/codon_start=1
/transl_table=11
/product="cytochrome bd ubiquinol oxidase subunit I"
/protein_id="YP_003111098.1"
/db_xref="GI:256389534"
/db_xref="InterPro:IPR002585"
/db_xref="GeneID:8331631"
/translation="MLGSSLSDARIETGFSLAFHIVFAVFGVGLPWLLLVTEGRWLKT
RDPVWLALTRKWSRVMAVLFAIGAVSGTVLSFEFGLLWPAFMARYGGVLGLPFTLEAF
AFFAEAIFVGLYLYGWKRLSPRAHWLTLWPIAISGTLSTLFIVTANSWMNVPTGVKEV
GGKVVSAEPLAPLTGPGALPESLHMLLAAIMCTGGVVAAVYAVGMLRGRRDSYHRRGF
RVGLVTVLAAAPLQLVVGDLAARVVEKYQPAKLAAMEALTHTQSHAPLTLGGIYDPST
GKTRFGIEIPDGLSLLTGFRTDKTIRGLDILPAKQQPATPVVHLAFDTMVGGGMAILG
LAGLLAVVALWRRRKGVRPLIPLTRPWLLAGALTGPAAMAAMLAGWEVTEAGRQPWIV
YGRMTVRQAATTSGGIGWSLIATIAVYLGLATALLLILRRLATGAPPELAEGAEPSGP
QDPESPTHEPSGSEGDAEDSPESTETNAESTPESSPELEGAAR"
misc_feature complement(342925..344157)
/locus_tag="Caci_0304"
/note="Bacterial Cytochrome Ubiquinol Oxidase; Region:
Bac_Ubq_Cox; pfam01654"
/db_xref="CDD:216630"
gene 344239..344628
/locus_tag="Caci_0305"
/db_xref="GeneID:8331632"
CDS 344239..344628
/locus_tag="Caci_0305"
/inference="protein motif:PFAM:PF03965"
/note="PFAM: Penicillinase repressor;
KEGG: fre:Franean1_6581 CopY family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="CopY family transcriptional regulator"
/protein_id="YP_003111099.1"
/db_xref="GI:256389535"
/db_xref="InterPro:IPR005650"
/db_xref="GeneID:8331632"
/translation="MANERAGGPPRLGELERAVMDVLWNAPDGSTAQEIVERLAARDG
TAELAATTVLTVLDRLRRKDFVERERVGRAHRYRAARTRDDVIAASMLAVLETTDDRR
SALVRFAGSVSAEEAALLREALAGLEE"
misc_feature 344272..344565
/locus_tag="Caci_0305"
/note="Penicillinase repressor; Region: Pencillinase_R;
cl17580"
/db_xref="CDD:248134"
gene 345021..345965
/locus_tag="Caci_0306"
/db_xref="GeneID:8331633"
CDS 345021..345965
/locus_tag="Caci_0306"
/inference="protein motif:PFAM:PF01435"
/note="PFAM: peptidase M48 Ste24p;
KEGG: aau:AAur_1766 M48 family peptidase"
/codon_start=1
/transl_table=11
/product="peptidase M48 Ste24p"
/protein_id="YP_003111100.1"
/db_xref="GI:256389536"
/db_xref="InterPro:IPR001915"
/db_xref="GeneID:8331633"
/translation="MFADAWPLAVLAILLAWPVPVFLARAAWPRRHARAAIALWQAVG
VAGGLALIGAPLAVGVAPLDGHLRTGLVELWRDAFHLRVPAALGLAQEIALALAAVLT
VRLVGVTLLSAWRIERDLRRQRDAVDLAAEHADRDLRVLEHAAPAAYCLPGTRPRIVI
TEGTIAALAPDELEAVLAHERAHARWRHELVVQPFVAWESALPLPPARRATASVTALV
EMLADDHAARSVGRPALARALVAIGGTAGPVPNQRTDGAPGSGSDPNPVRATPTLDRV
QRLVRRPKATSLAERLIGPAAWLAAVLLVAGPTWYVLR"
sig_peptide 345021..345101
/locus_tag="Caci_0306"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.971) with cleavage site probability 0.885 at
residue 27"
misc_feature <345360..345857
/locus_tag="Caci_0306"
/note="Zn-dependent protease with chaperone function
[Posttranslational modification, protein turnover,
chaperones]; Region: HtpX; COG0501"
/db_xref="CDD:223575"
gene complement(346002..347297)
/locus_tag="Caci_0307"
/db_xref="GeneID:8331634"
CDS complement(346002..347297)
/locus_tag="Caci_0307"
/EC_number="3.4.11.21"
/inference="protein motif:PRIAM:3.4.11.21"
/note="catalyzes the removal of amino acids from the N
termini of peptides"
/codon_start=1
/transl_table=11
/product="aminopeptidase 2"
/protein_id="YP_003111101.1"
/db_xref="GI:256389537"
/db_xref="InterPro:IPR001948"
/db_xref="GeneID:8331634"
/translation="MPIFDRAHTDDLLAFLAASPTPYHAVTNAAARLEAAGFRQLRQS
AGWESADGGGFYAIRGAAIIAWYLPEGAAAPTGFRVVGAHTDSPNLRVKPLPDTGSAG
FRQVAVELYGGPLLNSWLDRDLGLAGRLVLRGGEAALVHVDRALMRVPQLAVHLDRGV
NDSGLLLDKQQHLTPAWGLGPVEDGALIEFAAKEAGVSASDVMGFDLMLHDVTPPTYL
GRDQEMIAAPRMDNLVSVHAGVQALIAAASGAGGPLTAIPVLAAFDHEETGSESDTGA
GGPLLGTILSRVTQAQLGGSADDYARALAATVVMSSDMSHAVHPNYPERHEPGHRPRL
NGGPALKTNVNQRYATDGLGRAIWTDVCERAGIPTQYFVGKNSLPCGTTIGPITAAKL
GVTTFDVGITSLSMHSAREMGGADDPFLLASAAASFFAG"
misc_feature complement(346044..347273)
/locus_tag="Caci_0307"
/note="M18 Peptidase Aspartyl aminopeptidase; Region:
M18_DAP; cd05658"
/db_xref="CDD:193534"
misc_feature complement(346047..347255)
/locus_tag="Caci_0307"
/note="Aminopeptidase I zinc metalloprotease (M18);
Region: Peptidase_M18; pfam02127"
/db_xref="CDD:216888"
misc_feature complement(order(346077..346082,346152..346157,
346254..346256,346275..346277,346350..346352,
346356..346361,346497..346502,346602..346607,
347046..347048))
/locus_tag="Caci_0307"
/note="active site"
/db_xref="CDD:193534"
misc_feature complement(order(346077..346079,346359..346361,
346497..346502,346605..346607,347046..347048))
/locus_tag="Caci_0307"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193534"
gene complement(347404..349626)
/locus_tag="Caci_0308"
/db_xref="GeneID:8331635"
CDS complement(347404..349626)
/locus_tag="Caci_0308"
/inference="protein motif:PFAM:PF03176"
/note="PFAM: MMPL domain protein;
KEGG: nca:Noca_3656 MmpL domain-containing protein"
/codon_start=1
/transl_table=11
/product="MMPL domain-containing protein"
/protein_id="YP_003111102.1"
/db_xref="GI:256389538"
/db_xref="InterPro:IPR000731"
/db_xref="InterPro:IPR004869"
/db_xref="GeneID:8331635"
/translation="MFGRLGRFVVHNPWKIIVGWIIAAVALVAFGPQLSSVTNDNQSS
FLPSKYESVQAKNALDAEFPSTVGQVATIVIRPVGDGALSAAEQQKVSDLATTLTGDH
ITGVAGVQAGQVSPKQTAQLMFAKLTADQGDQKASSDAVKALRADLAAKLNGSGMKAE
VTGDAAMGLDTSDSSNKATGIVMMATLLLIIVLMGFIFRGVIAVLLPILSVFLVMMVS
QPVIALMAKGFGLHVQSFLEIMLVVVLFGIGTDYIVFLLFRLRERLRAGDTIQQAVAT
TVERVGEAIASAAAAVIIAFCALGLATFKAFTSLGPALAIAVAVMLLAGLTLVPALMV
TLGTKIFWPGKKWRRVPTAGPARKVGNLVGKRPAAVAAVSFVIMAGLAVGAVGFKADY
DQQSQMPGGVESTIAIKDMQKAGFAQGATAATDVIVTSTDGKPLDQAKLQTYADGLGA
ASPELSGLMPFPVKPGSPAGTKGATVEYNQAGTAAHIQVLTKDSPFAAAAMSAVDGPL
KSAAHSTVPAGAKALVGGGTAALSDIQAANNSDLALILPVAGLLIFLVLALQLRALVA
PLYLMVAVGLGYTGTLGASVLMFQTVQNKPGMMFMLPVMVYLFVVAIGTDYNILMISR
LREEAREGHDPRRAAALAVEHAGPSVASAGLILAGTFASLMLGGLAMMQQIGFAVSFG
ISIAAFVMSMFLVPAVTALMGAKAWWPGHKGVASATAGVGRPVVSDLDDEVVGAGAHR
"
misc_feature complement(348517..349497)
/locus_tag="Caci_0308"
/note="MMPL family; Region: MMPL; pfam03176"
/db_xref="CDD:217407"
misc_feature complement(347452..348432)
/locus_tag="Caci_0308"
/note="MMPL family; Region: MMPL; pfam03176"
/db_xref="CDD:217407"
gene 349752..350393
/locus_tag="Caci_0309"
/db_xref="GeneID:8331636"
CDS 349752..350393
/locus_tag="Caci_0309"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: sen:SACE_6185 TetR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003111103.1"
/db_xref="GI:256389539"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331636"
/translation="MRRNSQSEHDPGGTKERIQHVALELFVLHGYEKTSLREISDRLG
ITKAALYYHYASKQELLKSVTQPLIDEFELLVAGDPDPETLLRSYVDLLHRHQAVFQL
VANDHASLAAAELVERSVKLRRDVVRRLAGPEPQPADYIRAAAAFGAISQGFMLARRV
EPAADPALPDVEATAEKAAETAAGLPAPADYPEGAELTRILMDTALAVLRSGS"
misc_feature 349791..350261
/locus_tag="Caci_0309"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:224228"
misc_feature 349803..349943
/locus_tag="Caci_0309"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 350452..351315
/locus_tag="Caci_0310"
/db_xref="GeneID:8331637"
CDS 350452..351315
/locus_tag="Caci_0310"
/inference="protein motif:PFAM:PF00126"
/note="PFAM: regulatory protein LysR; LysR substrate-
binding;
KEGG: tfu:Tfu_2825 LysR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_003111104.1"
/db_xref="GI:256389540"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:8331637"
/translation="MDLALLRTFLAVHRAGSLTRAAADLGVSQPAVTAQVRTLEQRVG
RELFVRLPRGVAPTAAADELARAIAPHLDALAAVAHETLVPDSGPLAAVRLGCPASLT
TTLLLPALAPLVDEGLRVVVAGGRSDDLVAQLATGRLDLTLAVTRPRLPGVTVIPLAD
EEYALVGAPRWKPFDRTGRTPLLDLSENLPYISLYWSSVYDTRPTSDAALVIPDLRGV
LDAAVAGCGAAVLPLPLCAPALDDWTLVLLDEPEIPPIRTLFVAVRGQRARSAAVARV
RDRLVAVASRW"
misc_feature 350452..351231
/locus_tag="Caci_0310"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:223656"
misc_feature 350458..350634
/locus_tag="Caci_0310"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:215735"
misc_feature 350800..351231
/locus_tag="Caci_0310"
/note="LysR substrate binding domain; Region:
LysR_substrate; pfam03466"
/db_xref="CDD:217576"
gene 351679..352761
/locus_tag="Caci_0311"
/db_xref="GeneID:8331638"
CDS 351679..352761
/locus_tag="Caci_0311"
/inference="protein motif:PFAM:PF01471"
/note="PFAM: peptidoglycan-binding protein;
KEGG: sgr:SGR_1348 amidase"
/codon_start=1
/transl_table=11
/product="peptidoglycan-binding protein"
/protein_id="YP_003111105.1"
/db_xref="GI:256389541"
/db_xref="InterPro:IPR002477"
/db_xref="GeneID:8331638"
/translation="MTWELPAQGQAQEATQAIPAQNGSLNPDSLNPEVYASLFRPEGA
PARANPNATQVMPSVPDDYGRPGYDQDGYPQAGYDQRAANQPAYDQPIDYQAAGGGAY
AEPYETGYADDYPDEPSARPSNRGTKIGIGVAAGAVLVIVISLITLGGGSSKPSAGPA
NTPGTVTTPTVPPSTSAPQVAASDPATSTPSSPASSTSHAPGTLQLGDSGAEVKWLQT
RLHQLGVYNGPINSKFDAATQAAVAAFQAKTHASDPAGVVGRSTKTALIAAGSKPTLM
GQVPNLPGGPLGGDKHHRGNNPADVKRLQQALAVALNTNLKATGQFDLDTFGAVVQYQ
GAMHMTPDGLVNGTVWAALQQGRISG"
misc_feature 352573..352737
/locus_tag="Caci_0311"
/note="Putative peptidoglycan binding domain; Region:
PG_binding_1; pfam01471"
/db_xref="CDD:216518"
gene complement(352923..353228)
/locus_tag="Caci_0312"
/db_xref="GeneID:8331639"
CDS complement(352923..353228)
/locus_tag="Caci_0312"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: cbt:CLH_2449 TfoX C-domain superfamily"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111106.1"
/db_xref="GI:256389542"
/db_xref="GeneID:8331639"
/translation="MSSTETVTLIQNAVNIGPVLTQRLRDVGVTTLDEVRERGAIEVW
QLIAHTAEGNECAHMLLALEGALRGQRWTSIPRSERDALLVEVGLKDASELRAPKKR"
misc_feature complement(352971..353186)
/locus_tag="Caci_0312"
/note="TfoX C-terminal domain; Region: TfoX_C; pfam04994"
/db_xref="CDD:218369"
gene complement(353306..353719)
/locus_tag="Caci_0313"
/db_xref="GeneID:8331640"
CDS complement(353306..353719)
/locus_tag="Caci_0313"
/inference="protein motif:PFAM:PF01398"
/note="PFAM: Mov34/MPN/PAD-1 family protein;
SMART: Mov34/MPN/PAD-1 family protein;
KEGG: tfu:Tfu_2370 Mov34/MPN/PAD-1"
/codon_start=1
/transl_table=11
/product="Mov34/MPN/PAD-1 family protein"
/protein_id="YP_003111107.1"
/db_xref="GI:256389543"
/db_xref="InterPro:IPR000555"
/db_xref="GeneID:8331640"
/translation="MLTVSQEIYDAIVAHARRDHPDEACGIVAGPEGSDRPERFVPMA
NAERSPTFYRLDPAEQFKVWREMDDRDEEPVIVYHSHTSTEARPSRTDISYASEPNAH
YVLVSTRDTDKLGDFQFRSFRIVDGEVTEEPVTVL"
misc_feature complement(353318..353704)
/locus_tag="Caci_0313"
/note="Mpr1p, Pad1p N-terminal (MPN) domains with
catalytic isopeptidase activity (metal-binding); Region:
MPN_like; cd08070"
/db_xref="CDD:163701"
misc_feature complement(order(353444..353446,353453..353455,
353477..353479,353483..353485,353651..353653))
/locus_tag="Caci_0313"
/note="MPN+ (JAMM) motif; other site"
/db_xref="CDD:163701"
misc_feature complement(order(353444..353446,353477..353479,
353483..353485))
/locus_tag="Caci_0313"
/note="Zinc-binding site [ion binding]; other site"
/db_xref="CDD:163701"
gene 353797..355236
/locus_tag="Caci_0314"
/db_xref="GeneID:8331641"
CDS 353797..355236
/locus_tag="Caci_0314"
/inference="protein motif:TFAM:TIGR00879"
/note="KEGG: sgr:SGR_1900 glucose transporter;
TIGRFAM: sugar transporter;
PFAM: general substrate transporter; major facilitator
superfamily MFS_1"
/codon_start=1
/transl_table=11
/product="sugar transporter"
/protein_id="YP_003111108.1"
/db_xref="GI:256389544"
/db_xref="InterPro:IPR003663"
/db_xref="InterPro:IPR005828"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331641"
/translation="MTTRTGRESGPNPPGDSAAARVAPRIVFIAAAAALGGFLFGYDS
AVINGAVTGIQHDFNVGSGTTGFVVAAALPGAAAGAIAGGWMADRIGRIRAMQIAAVL
FIISGIGSMFAFQPWDLTIWRILGGFAIGIASVIGPAYIAEVSPPAFRGRLTSFQQLA
IVLGIAISALVNYLINQWAGGTNTDHLGGLAAWRWMLGAEVIPAILYGVLSTMIPESP
RFLVANGEDDRAREVLAEVEGTHANVADRIAEIRDQLAGEVKPKLADLLTPSRKNLLA
VVWIGIGLSVLQQFVGINVIFYYSSLLWQSVGIDTSNSLLISMISAAVNIAGTVVAMA
LVDRIGRRPLLLIGSVGMAVTLGLCAWMFSYGTHANGKTTLPKAQGVTALLGANAYVF
FFAMSWGVVVWVLLGEMFPNRIRAVALSVAASAQWLANWLVTVSFPSLSRWSLAGAYS
LYAIAAAVSIPFVYYLVRETKGKTLESMG"
misc_feature 353914..355230
/locus_tag="Caci_0314"
/note="D-xylose transporter XylE; Provisional; Region:
xylE; PRK10077"
/db_xref="CDD:182225"
misc_feature 353914..>354441
/locus_tag="Caci_0314"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature order(353926..353928,353935..353943,353947..353952,
354001..354003,354010..354015,354022..354024,
354034..354039,354043..354048,354184..354189,
354196..354201,354208..354213,354220..354222,
354256..354261,354268..354273,354289..354291)
/locus_tag="Caci_0314"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature <354616..355116
/locus_tag="Caci_0314"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene 355276..355788
/locus_tag="Caci_0315"
/db_xref="GeneID:8331642"
CDS 355276..355788
/locus_tag="Caci_0315"
/inference="similar to AA sequence:KEGG:Strop_3309"
/note="KEGG: stp:Strop_3309 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111109.1"
/db_xref="GI:256389545"
/db_xref="GeneID:8331642"
/translation="MGLDFRTDPETLREIVDDPAALAARIHTLAALDMDEHPEARSEY
ATLLRIAGRLDDAALEAELTLAAADLAGDLRRMVRATLLVGHVRQYRGEWDQADTMFH
RAEKLALYLKDDRLVAAAAHHSGRSFYDQGKHVEAALRFRLALEIDTRIGSPKVSAVW
EAFEAAMAKL"
misc_feature 355525..355725
/locus_tag="Caci_0315"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
gene complement(355850..356605)
/locus_tag="Caci_0316"
/db_xref="GeneID:8331643"
CDS complement(355850..356605)
/locus_tag="Caci_0316"
/inference="protein motif:PFAM:PF08241"
/note="PFAM: methyltransferase type 11; methyltransferase
type 12;
KEGG: sgr:SGR_5042 methyltransferase"
/codon_start=1
/transl_table=11
/product="methyltransferase type 11"
/protein_id="YP_003111110.1"
/db_xref="GI:256389546"
/db_xref="InterPro:IPR013216"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:8331643"
/translation="MLDYDLEAARYDQTRGGVERARAAADAVLELVPKDCAVLLDVAC
GTGIVSELLRTPDRTVIGVDMAAGMLALARPRLGGTGRAVRGDATRLPLASGAVDAVT
FMWLLHLVDEAVVAAAVAEAARVLRPGGVMVTTVDKDSAQFGMNTDVGAIMRAARQEL
APPASDQAERVRELAAAVGLEAAGTARYVGHGQGQTPKAWARRLREQAGWARRADPAR
IAEICRALEALPEQDVRRPDPEYVVASFRLDGH"
misc_feature complement(356198..356491)
/locus_tag="Caci_0316"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(356342..356350,356411..356416,
356462..356482))
/locus_tag="Caci_0316"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 356752..357615
/locus_tag="Caci_0317"
/db_xref="GeneID:8331644"
CDS 356752..357615
/locus_tag="Caci_0317"
/inference="protein motif:PFAM:PF00296"
/note="PFAM: Luciferase-like monooxygenase;
KEGG: sma:SAV_7083 Rif11-like protein"
/codon_start=1
/transl_table=11
/product="luciferase-like monooxygenase"
/protein_id="YP_003111111.1"
/db_xref="GI:256389547"
/db_xref="InterPro:IPR016048"
/db_xref="GeneID:8331644"
/translation="MHPRTFRFAVVAALAPTAQAWQELARRAEELGYDTLLAPDTMTT
LEPFTALAAAATATERLRVGTFVLPAPFYPPSEIAWRALALDLLSGGRFDLGLGAGRP
GAEDEVVHRERRFGTPAERVKQLSDALHIVKEELAAAAAGRSPLKPVQKPHPPILVAA
AGPKMFQLAAAEADILTLGLDPRTTEDGLAAKIAELRAIAGSRVDDLELSYNLAGVGT
ELPGFLSQQMGVDPAELIRTGAPAVLTGTPQEMADKLRRRRDTLGISYIAVNGMFLEQ
LAPVVEMLAGK"
sig_peptide 356752..356814
/locus_tag="Caci_0317"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.998) with cleavage site probability 0.968 at
residue 21"
misc_feature 356767..357606
/locus_tag="Caci_0317"
/note="probable F420-dependent oxidoreductase, MSMEG_2516
family; Region: F420_MSMEG_2516; TIGR03621"
/db_xref="CDD:200301"
misc_feature 356815..357351
/locus_tag="Caci_0317"
/note="Flavin-utilizing monoxygenases; Region:
Flavin_utilizing_monoxygenases; cl07892"
/db_xref="CDD:244823"
gene complement(357646..358143)
/locus_tag="Caci_0318"
/db_xref="GeneID:8331645"
CDS complement(357646..358143)
/locus_tag="Caci_0318"
/inference="protein motif:PFAM:PF01638"
/note="PFAM: helix-turn-helix HxlR type;
KEGG: fre:Franean1_4116 HxlR family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="HxlR family transcriptional regulator"
/protein_id="YP_003111112.1"
/db_xref="GI:256389548"
/db_xref="InterPro:IPR002577"
/db_xref="GeneID:8331645"
/translation="MQAIRYTGRMLGKTYDSQVCSIARALEVVGERWSLLIVRDALFG
GATRYSDFQRSLGIATNVLKTRLDGLVETGVMRRHQYSQQREQYEYLLTDKGRALAHS
LVALSEWGDQWATDGEPPILYVHSVCGTGVTQKTVCAHCGVVEDPAEIRAEIGPGMPA
DRIPA"
misc_feature complement(357760..358116)
/locus_tag="Caci_0318"
/note="Predicted transcriptional regulators
[Transcription]; Region: COG1733"
/db_xref="CDD:224647"
misc_feature complement(357805..358062)
/locus_tag="Caci_0318"
/note="HxlR-like helix-turn-helix; Region: HxlR;
pfam01638"
/db_xref="CDD:201897"
gene 358175..358705
/locus_tag="Caci_0319"
/db_xref="GeneID:8331646"
CDS 358175..358705
/locus_tag="Caci_0319"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: fjo:Fjoh_4690 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111113.1"
/db_xref="GI:256389549"
/db_xref="GeneID:8331646"
/translation="MMQATAEQQQRPYTTGFTVARTPRAAYDAVLDVRGWWSAAVEGV
TDQVGGVFDYRFQDVHRCKVRVAELVPEQKVVWHVEENYFNFIADQTEWTGTDIVFEI
SPAPDGGAEIRFTHIGLLPQDECYDVCSNAWGGYIAGSLRALIETGQGHPNPKHDGDA
PSHQDAASAIRAERRP"
misc_feature 358226..358615
/locus_tag="Caci_0319"
/note="Putative hydrophobic ligand-binding SRPBCC domain
of Micromonospora echinospora CalC, human Aha1, and
related proteins; Region: SRPBCC_CalC_Aha1-like; cd07814"
/db_xref="CDD:176856"
misc_feature order(358250..358258,358262..358267,358280..358282,
358304..358306,358322..358324,358328..358330,
358334..358336,358340..358342,358355..358357,
358361..358366,358370..358372,358379..358381,
358397..358399,358403..358408,358463..358468,
358472..358474,358478..358480,358511..358513,
358517..358519,358523..358525,358529..358531,
358547..358573,358577..358585,358595..358597)
/locus_tag="Caci_0319"
/note="putative hydrophobic ligand binding site [chemical
binding]; other site"
/db_xref="CDD:176856"
gene complement(358702..359427)
/locus_tag="Caci_0320"
/db_xref="GeneID:8331647"
CDS complement(358702..359427)
/locus_tag="Caci_0320"
/inference="protein motif:PFAM:PF05721"
/note="PFAM: phytanoyl-CoA dioxygenase"
/codon_start=1
/transl_table=11
/product="phytanoyl-CoA dioxygenase"
/protein_id="YP_003111114.1"
/db_xref="GI:256389550"
/db_xref="InterPro:IPR008775"
/db_xref="GeneID:8331647"
/translation="MLSTEQLKEFGERGYVVVPGVVARNVVAKANKRIDELIAANPPA
QGQVGHHFYFPAAADEPELLETLMDSAFGYAEALTGPGLLETPQQVQVALNIPPFSHR
PGRPHIDAAISEPTPGFTPNSFTLLAGVFVTDQLRENSGNLWVWPGTHRTHAEYFRER
GIEMYCAYPDIELPEPEQVTARAGDLLLAHYLLGHNIGGNYESDTTRRMLYYRVSGRG
HAEGPERILTEPWYEYGPVRALI"
misc_feature complement(358801..>359073)
/locus_tag="Caci_0320"
/note="Phytanoyl-CoA dioxygenase (PhyH); Region: PhyH;
cl17312"
/db_xref="CDD:247866"
gene complement(359470..360339)
/locus_tag="Caci_0321"
/db_xref="GeneID:8331648"
CDS complement(359470..360339)
/locus_tag="Caci_0321"
/inference="protein motif:PFAM:PF04116"
/note="PFAM: fatty acid hydroxylase;
KEGG: nfa:nfa16290 hypothetical protein"
/codon_start=1
/transl_table=11
/product="fatty acid hydroxylase"
/protein_id="YP_003111115.1"
/db_xref="GI:256389551"
/db_xref="InterPro:IPR002016"
/db_xref="InterPro:IPR006694"
/db_xref="GeneID:8331648"
/translation="MRLVIDGIDLTTLAIPFYVLFMALELLSLRFFPDPVEQGYTVKD
TATSLTMGIGSIVCNLGWGLVTVAAVAGVHALAPWHIASSLTGWLVLFVAYDFFYYWE
HRANHRVRILWASHVVHHSSRHYNLSTALRQTWTGVGNTIFLLPLALVGFPSYMIFAT
AAMNLLYQFWIHTERIATMWRPIEFVMNTPSHHRVHHGSNQGYLDKNYGGVFIVFDRL
FRSFEPEGEPVEYGLTKNIGTFNPLRVAAHEYAAIARDVRGAAGWRARFGYVLRGPGW
SPASPVPATAVTV"
misc_feature complement(359569..360303)
/locus_tag="Caci_0321"
/note="Sterol desaturase [Lipid metabolism]; Region: ERG3;
COG3000"
/db_xref="CDD:225546"
misc_feature complement(359749..360078)
/locus_tag="Caci_0321"
/note="Fatty acid hydroxylase superfamily; Region:
FA_hydroxylase; pfam04116"
/db_xref="CDD:217907"
gene complement(360412..361983)
/locus_tag="Caci_0322"
/db_xref="GeneID:8331649"
CDS complement(360412..361983)
/locus_tag="Caci_0322"
/inference="protein motif:PFAM:PF05731"
/note="PFAM: TROVE domain protein;
KEGG: nfa:nfa39620 hypothetical protein"
/codon_start=1
/transl_table=11
/product="TROVE domain-containing protein"
/protein_id="YP_003111116.1"
/db_xref="GI:256389552"
/db_xref="InterPro:IPR008858"
/db_xref="GeneID:8331649"
/translation="MAKFNKTATKTAKTFEGGKAYKRDPKADLFLLAVTNMVGEDTFY
ESADTRDERYRDLVHAVAVSDPEWMLRFVTWLRAEANMRSAAVVAACESVRARLDAEA
SGYGRQLIAAACQRADEPGEVLAYWTGRYGRALPKPVKRGVADAVAHLYNEYSFAKYD
SDAKGFRFGDVIDLVHPAAAADKPWQGELFRHALDRRHNRDNPVPEALPKLAKRAALL
GLPVAERRGVLLAEGGAQRLAEAGMTWEALAGWLQGPMDQAAWEAVIPSMGLMALARN
LRNFDEAGVADAVAWRVCSRFLDAGQVGRSRMLPYRWLSAYKAAPSLRWGHALEGALG
HAIAGVPELPGRTLVLVDTSGSMTGRVSARSTVTHLDIGALIGVALADRAAGSGRADD
VDLVGFADGVFRHELTKGGSVLRGIEAFAKRSGEVGHGTRMIDAIAATYDRHDRVVIV
SDMQAFPYFYHQNKGADAFIPDTVPVFGINTAGYGPSALPPGKRNRFEIGGFSDKVFT
LFGLLASGDDPALPF"
misc_feature complement(360949..361923)
/locus_tag="Caci_0322"
/note="TROVE domain; Region: TROVE; pfam05731"
/db_xref="CDD:218721"
gene complement(362213..363790)
/locus_tag="Caci_0323"
/db_xref="GeneID:8331650"
CDS complement(362213..363790)
/locus_tag="Caci_0323"
/inference="protein motif:TFAM:TIGR00711"
/note="TIGRFAM: drug resistance transporter EmrB/QacA
subfamily;
PFAM: major facilitator superfamily MFS_1;
KEGG: sgr:SGR_5254 major facilitator superfamily permease"
/codon_start=1
/transl_table=11
/product="EmrB/QacA subfamily drug resistance transporter"
/protein_id="YP_003111117.1"
/db_xref="GI:256389553"
/db_xref="InterPro:IPR001411"
/db_xref="InterPro:IPR004638"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331650"
/translation="MSTNSPPSGRRQRLILTVLIFAQLLIWIDGTVLSTAYETLADPV
RGLGATPGQLQWATGSYTLVLATVTFTGGALGDRFGHRNTLLAGMALFGLASVFAAYS
QNTGQLIAARAVMGLGAALLIPATLAVISFTYPPEQRPQAFGVLSSFAGVGIAAGPVL
AGLMLANFWWGSVFLINVPVVVLGLVAIARTVPNFQPPAKRGLDFPGLLLSSAGLGLL
SYGLIRAGQDGTVTEPQVWITVAGGLVVTAAFVVVELRRRHPSFDPRLFRLRQFAAGN
VSLTLLFLALSASGFYFAFYLQGARGYSALRASLVGIPGALGVVIGGPVAAKLARRTS
VRRVSGTALTVSTITLLVFSRVGLGLPIPAYIAVSIVQATAIGMTIAPLTGAILGSLP
LAQAGAGSAVNATMRQTGSVLGIALGGTILSIGYRHAIGGSVAALPAPLKQQAETSAE
MARNVARHNGIPNLAHQADLAFVHAMHTGMVWSAAATGIGALLVFGAFANPRKTKTEA
VTAQLEASTVVPESASA"
misc_feature complement(362276..363760)
/locus_tag="Caci_0323"
/note="methyl viologen resistance protein SmvA;
Provisional; Region: PRK14995"
/db_xref="CDD:184957"
misc_feature complement(<363206..363745)
/locus_tag="Caci_0323"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(363329..363331,363347..363352,
363359..363364,363398..363400,363407..363412,
363419..363424,363431..363436,363572..363577,
363581..363586,363596..363598,363605..363610,
363617..363619,363677..363682,363686..363694,
363701..363703))
/locus_tag="Caci_0323"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature complement(362480..>362905)
/locus_tag="Caci_0323"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene 364025..364477
/locus_tag="Caci_0324"
/db_xref="GeneID:8331651"
CDS 364025..364477
/locus_tag="Caci_0324"
/inference="protein motif:PFAM:PF01047"
/note="PFAM: regulatory protein MarR;
SMART: regulatory protein MarR;
KEGG: bbt:BBta_4007 MarR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="MarR family transcriptional regulator"
/protein_id="YP_003111118.1"
/db_xref="GI:256389554"
/db_xref="InterPro:IPR000835"
/db_xref="GeneID:8331651"
/translation="MSTSDKLGEDGVVSFAIRHVWLGMRAVIEDELTEFGLTVPQFAT
LMMLDSSPGLTVAEVARACGTTRQSANEMVAGLESRGLVERAAHPTDRRAHQLHATEA
GLEMYAKARPAVRRREEELEAGLSPQVRQAAREWMAAIAISCGLPDKK"
misc_feature 364115..364408
/locus_tag="Caci_0324"
/note="helix_turn_helix multiple antibiotic resistance
protein; Region: HTH_MARR; smart00347"
/db_xref="CDD:197670"
misc_feature 364127..364306
/locus_tag="Caci_0324"
/note="MarR family; Region: MarR_2; pfam12802"
/db_xref="CDD:221778"
gene 364672..365445
/locus_tag="Caci_0325"
/db_xref="GeneID:8331652"
CDS 364672..365445
/locus_tag="Caci_0325"
/inference="similar to AA sequence:KEGG:RHA1_ro03810"
/note="KEGG: rha:RHA1_ro03810 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111119.1"
/db_xref="GI:256389555"
/db_xref="GeneID:8331652"
/translation="MSTSLLFTSDSSADGVRERDFTVGGVPGVLWSPDSRPDRAPLVL
IGHGGGIHKKAPGSAGRARALVLGCGFHVAAIDAPGHGDRPRTEHDEREIDALFAARD
AGEPEGPIVVRYNAYLAEQAVPEWRATLDALQELREIGADGPVGYWGINMGTAIGIPF
VAADPRITAAVFGQHWPDFLAEPAKRITIPVEFDLQWDDEHIPRSAGLALFDAFASPE
KTLHANAGRHKQLPRFEADSAVRFFARHFGAPAAGTAAA"
misc_feature 364762..>364917
/locus_tag="Caci_0325"
/note="Putative lysophospholipase; Region: Hydrolase_4;
pfam12146"
/db_xref="CDD:221442"
misc_feature 364795..365322
/locus_tag="Caci_0325"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_5;
pfam12695"
/db_xref="CDD:221718"
gene complement(365498..366184)
/locus_tag="Caci_0326"
/db_xref="GeneID:8331653"
CDS complement(365498..366184)
/locus_tag="Caci_0326"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sma:SAV_2940 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111120.1"
/db_xref="GI:256389556"
/db_xref="GeneID:8331653"
/translation="MAEPHAAWGMRQIEEFNEFLPIGPWTVNLDERRYRQSGRELRIS
VLGSFDTAEGSWLWGWANPGFGKLPVVAAAEALRSFGLDHGVPEFSEELVDLSGFEDP
RYAAEMLAFGAMGVLRADGYIGVQANETGRLYMVPDDPQVPVADPDPIALPRLLMQGA
QFFNRSAYEVVAGYFHHFTIPWRQEGDTITAELPGGATASVQFDGQGRVAAVSMGSIT
KESLGNTADA"
gene complement(366387..367406)
/locus_tag="Caci_0327"
/db_xref="GeneID:8331654"
CDS complement(366387..367406)
/locus_tag="Caci_0327"
/inference="protein motif:PFAM:PF08279"
/note="PFAM: hypothetical protein; regulatory protein
MerR;
KEGG: fre:Franean1_1870 helix-turn-helix type 11
domain-containing protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111121.1"
/db_xref="GI:256389557"
/db_xref="InterPro:IPR000551"
/db_xref="InterPro:IPR001034"
/db_xref="InterPro:IPR013196"
/db_xref="GeneID:8331654"
/translation="MNHPAGRVLTLLELLQSGGVRTAAEIAERLGVDARTVRRYVEQL
LELEIPVESVRGRYGGYRLARGFRLPPLMLGDDEALAVLLGLLAGRRSGLTAALGAAG
ETAGAKIRRVLPARLSERLRSVLDSVAFTGAPDQSAALDATVLLTVADAVANQRPIAV
RYTGRDGVRGDRTLHPYAIVSHGERWYVRALDPAIGEERTFRLDRIDGARALPGSFEA
PTMDDDPGQSLLAGFAAADYRYEVAIRVHGTVEQIRARFPVSVATIQPLSDANGNGDG
NGNGNEAQTPWHRLAIRAEHLDWIPPTLAALDLPFEIEDPDELRDLVIAFADRLATRA
RGGLE"
misc_feature complement(366417..367388)
/locus_tag="Caci_0327"
/note="Predicted transcriptional regulator
[Transcription]; Region: COG2378"
/db_xref="CDD:225253"
misc_feature complement(367245..367388)
/locus_tag="Caci_0327"
/note="HTH domain; Region: HTH_11; pfam08279"
/db_xref="CDD:116863"
misc_feature complement(366414..366947)
/locus_tag="Caci_0327"
/note="WYL domain; Region: WYL; pfam13280"
/db_xref="CDD:222022"
gene 367470..367901
/locus_tag="Caci_0328"
/db_xref="GeneID:8331655"
CDS 367470..367901
/locus_tag="Caci_0328"
/inference="protein motif:PFAM:PF00903"
/note="PFAM: glyoxalase/bleomycin resistance
protein/dioxygenase;
KEGG: sco:SCO4486 hypothetical protein"
/codon_start=1
/transl_table=11
/product="glyoxalase/bleomycin resistance
protein/dioxygenase"
/protein_id="YP_003111122.1"
/db_xref="GI:256389558"
/db_xref="InterPro:IPR004360"
/db_xref="GeneID:8331655"
/translation="MTTNLASTRIITADIASLVAFYEKATALPATWATPDFAELATPA
GATLAIGSTRTVPLFAPDSAAPGANRSVIIEFLVDDVDALWQRLAAWIPASDVVAEPK
TLPWGNRSLLVRDPDGTLVNFFTPVTPEARAKYGLSALIES"
misc_feature 367482..367838
/locus_tag="Caci_0328"
/note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily; Region: Glyoxalase; pfam00903"
/db_xref="CDD:216182"
misc_feature 367488..367838
/locus_tag="Caci_0328"
/note="This domain superfamily is found in a variety of
structurally related metalloproteins, including the type I
extradiol dioxygenases, glyoxalase I and a group of
antibiotic resistance proteins; Region: Glo_EDI_BRP_like;
cd06587"
/db_xref="CDD:211348"
misc_feature order(367488..367490,367500..367502,367587..367589,
367614..367616,367620..367622,367686..367688,
367803..367805,367827..367829,367833..367835)
/locus_tag="Caci_0328"
/note="active site"
/db_xref="CDD:211348"
misc_feature order(367488..367490,367686..367688,367833..367835)
/locus_tag="Caci_0328"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:211348"
gene complement(367879..368469)
/locus_tag="Caci_0329"
/db_xref="GeneID:8331656"
CDS complement(367879..368469)
/locus_tag="Caci_0329"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: mab:MAB_1873c TetR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003111123.1"
/db_xref="GI:256389559"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331656"
/translation="MTADPSSPAQQQLRADALRNRESVLAAATAAFAASEAEPSMREI
ARQAGVGVATLYRHFPTREALVDAVYQDQVVRLTAGARDLLAAHPPARALRLWMDLFA
DWLTTKRGMTGTLLAMVDAGDISLAHTRGELLAAIATILDAGIAAGEIRADTSAEDVS
AAVLGLLAVSGERGNPEQAQRLLDVLMDGLRTRSER"
misc_feature complement(367882..368352)
/locus_tag="Caci_0329"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:224228"
misc_feature complement(368263..>368352)
/locus_tag="Caci_0329"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 368589..369569
/locus_tag="Caci_0330"
/db_xref="GeneID:8331657"
CDS 368589..369569
/locus_tag="Caci_0330"
/inference="protein motif:PFAM:PF08240"
/note="PFAM: alcohol dehydrogenase GroES domain protein;
KEGG: fal:FRAAL3688 zinc-binding dehydrogenase"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase GroES domain-containing
protein"
/protein_id="YP_003111124.1"
/db_xref="GI:256389560"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:8331657"
/translation="MADRITPPDTMRTVRFREYGEPADVLRLEIASVPAPSPGRIRIA
VHACGLAPADWALCRGLFAGDLPRGIGCDVAGTVEAVGEGVTDVAIGDPVFGTADYAG
QPSAGAADHAIMDHWYTVPEGLDLIQAAALPMALSTAYWHLTRLGLSAGSTLLVNGAG
TTIGYAAVQIALHRGLHVIATAGETYAPQLKNLGATVTAYGDGLPDRVAALSDTPIDI
VFDTAPPNGALPDLIRIADDDPQRILTCSDLATAPDLGARDTFHEDRTTFTDADRFSH
FPEFAHLAAKGKFTVPVAGTFPLDQWRTALDISQSGHARGKLLLLPGSQR"
misc_feature 368619..369554
/locus_tag="Caci_0330"
/note="NADPH:quinone reductase and related Zn-dependent
oxidoreductases [Energy production and conversion /
General function prediction only]; Region: Qor; COG0604"
/db_xref="CDD:223677"
misc_feature 368619..369548
/locus_tag="Caci_0330"
/note="alcohol dehydrogenase and quinone reductase-like
medium chain degydrogenases/reductases; Region:
MDR_like_2; cd05289"
/db_xref="CDD:176191"
misc_feature order(368739..368747,368754..368756,368988..368990,
369000..369002,369063..369080,369135..369140,
369144..369146,369183..369185,369252..369257,
369324..369329,369387..369395)
/locus_tag="Caci_0330"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176191"
gene 369649..370095
/locus_tag="Caci_0331"
/db_xref="GeneID:8331658"
CDS 369649..370095
/locus_tag="Caci_0331"
/inference="protein motif:PFAM:PF00293"
/note="PFAM: NUDIX hydrolase;
KEGG: rha:RHA1_ro06883 hypothetical protein"
/codon_start=1
/transl_table=11
/product="NUDIX hydrolase"
/protein_id="YP_003111125.1"
/db_xref="GI:256389561"
/db_xref="InterPro:IPR000086"
/db_xref="GeneID:8331658"
/translation="MDDVEVVDRISGRVILLDPNGRALLFQGFDPQRPNQLWWITPGG
GLEPGETPQQAAARELQEETSLDVQPQDLGEAVFRNYVEFFFDGRLLRQHNHFFTLRT
EPFEISTAGFDALEQRTHLTHRWWTLEELRTTDETFFPEELPDLLS"
misc_feature 369679..370077
/locus_tag="Caci_0331"
/note="Nudix hydrolase is a superfamily of enzymes found
in all three kingdoms of life, and it catalyzes the
hydrolysis of NUcleoside DIphosphates linked to other
moieties, X. Enzymes belonging to this superfamily require
a divalent cation, such as Mg2+ or Mn2+...; Region:
Nudix_Hydrolase; cl00447"
/db_xref="CDD:241868"
misc_feature order(369778..369786,369814..369840)
/locus_tag="Caci_0331"
/note="nudix motif; other site"
/db_xref="CDD:239217"
gene complement(370550..371932)
/locus_tag="Caci_0332"
/db_xref="GeneID:8331659"
CDS complement(370550..371932)
/locus_tag="Caci_0332"
/inference="protein motif:TFAM:TIGR00665"
/note="KEGG: sgr:SGR_3669 replicative DNA helicase;
TIGRFAM: replicative DNA helicase;
PFAM: DnaB domain protein helicase domain protein;
SMART: ATPase AAA"
/codon_start=1
/transl_table=11
/product="replicative DNA helicase"
/protein_id="YP_003111126.1"
/db_xref="GI:256389562"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR007692"
/db_xref="InterPro:IPR007693"
/db_xref="InterPro:IPR007694"
/db_xref="GeneID:8331659"
/translation="MSIDDLPYTADEAYQGGFERTPPQDIPAEQSVLGGMLLSKDAIA
EVIEVIKAIDFYKPAHEAVFGAILELYGRGEPADPVTVAALLTKKGDINRIGGAPYLH
TLINSVPTAANAGYYAEIVKERAVLRRLVEAGTRIVQMGYSTDGSDVEQIVDAAQQEM
YNVTEARTSEDFIPLADAMEGALDEIESISNRSGQMTGVPTGFHDLDALTNGLHPGQM
VIIAARPAIGKSTLGLDLARSCSIKNGLTSVIFSLEMGRNEIIMRLLSAEARVALHHM
RSGTMTDEDWARLARRMGPVSEAPLFIDDSPNMSMMEIRAKARRLKQRHDLQLVIIDY
MQLMQHSSSNSKRPDSRQQEVSEISRSLKLLAKELEVPVIAISQLNRGPEQRTDKRPM
MSDLRESGSLEQDADVIILLHREDAYERESPRAGEADLIVAKHRNGPTANITVAFQGH
YSRFVDMAQS"
misc_feature complement(370556..371872)
/locus_tag="Caci_0332"
/note="replicative DNA helicase; Region: DnaB; TIGR00665"
/db_xref="CDD:233080"
misc_feature complement(371564..371872)
/locus_tag="Caci_0332"
/note="DnaB-like helicase N terminal domain; Region: DnaB;
pfam00772"
/db_xref="CDD:216111"
misc_feature complement(370586..371323)
/locus_tag="Caci_0332"
/note="DnaB helicase C terminal domain. The hexameric
helicase DnaB unwinds the DNA duplex at the chromosome
replication fork. Although the mechanism by which DnaB
both couples ATP hydrolysis to translocation along DNA and
denatures the duplex is unknown, a...; Region: DnaB_C;
cd00984"
/db_xref="CDD:238484"
misc_feature complement(371243..371263)
/locus_tag="Caci_0332"
/note="Walker A motif; other site"
/db_xref="CDD:238484"
misc_feature complement(order(370592..370594,370625..370627,
370691..370693,370799..370801,370934..370936,
371243..371248))
/locus_tag="Caci_0332"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238484"
misc_feature complement(370934..370945)
/locus_tag="Caci_0332"
/note="Walker B motif; other site"
/db_xref="CDD:238484"
misc_feature complement(order(370652..370657,370691..370696,
370778..370804,370877..370885,370916..370921))
/locus_tag="Caci_0332"
/note="DNA binding loops [nucleotide binding]"
/db_xref="CDD:238484"
gene complement(372303..373931)
/locus_tag="Caci_0333"
/db_xref="GeneID:8331660"
CDS complement(372303..373931)
/locus_tag="Caci_0333"
/inference="similar to AA sequence:KEGG:SCO4070"
/note="KEGG: sco:SCO4070 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111127.1"
/db_xref="GI:256389563"
/db_xref="GeneID:8331660"
/translation="MHVPSRRQSLLILGGLGLAATAGGAYLLENHGGGSGKPAANPPK
PQPQPQARGRAKSTYGTGDANEGQEGEPSNATGETVPSLALALADDGAWRPDATGYLA
VDDEGHQIKGFASATSINVGESIDFHISVRPAQSFTVKVYRIGRSAAGKGSELVFTSA
KVTGKVQPALKVVAPTRTVVAPWQLSYTLNVPNTWRGGLYVATLETADKYRSCIPFVV
REDGKPADLLVVLPFTTYQAYNMYPVDKALGASLYNAYQPDGREGGADICATRVSFDR
PYHQDGLPRLFELDQAFAQWVEAQPYTISYASSIDLHAGRIDPAKYKALVFSGHDEYW
TPQMRAVLQGALSRGVSAAFMAANNVYWNIRLDASQGGSQYRQVTCYKRRPDPAATGS
VAPTVLWRDLNQPEQQVLGSMYTAIITDTQPQPLVVGETGHWFWAGTGLKNGEQIPRL
VAGEADKVFPHVKGGPKTTVLATSPFTAEGPKNTPVKDTQQTVLSQYPSGAWMFNAGT
FHWNHGLSTPGFVDVRIQRATRNLLDRMTGKRSA"
sig_peptide complement(373848..373931)
/locus_tag="Caci_0333"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.989) with cleavage site probability 0.453 at
residue 28"
gene complement(374094..374549)
/gene="rplI"
/locus_tag="Caci_0334"
/db_xref="GeneID:8331661"
CDS complement(374094..374549)
/gene="rplI"
/locus_tag="Caci_0334"
/inference="protein motif:TFAM:TIGR00158"
/note="in Escherichia coli this protein is wrapped around
the base of the L1 stalk"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L9"
/protein_id="YP_003111128.1"
/db_xref="GI:256389564"
/db_xref="InterPro:IPR000244"
/db_xref="GeneID:8331661"
/translation="MATTKLILTHEVGGLGEPGDVVEVKGGYARNYLVPRGYAIAWTR
GGEKQIELIRKARKVRTVRDLAHATELKGELEGLRVRLATRAGESGRLFGGVTVADVA
DAVKRAGGPDVDKRRIEIGNPIKTVGAHTVSVRLHPEVQAKVEITVVAA"
misc_feature complement(374097..374537)
/gene="rplI"
/locus_tag="Caci_0334"
/note="50S ribosomal protein L9; Reviewed; Region: rplI;
PRK00137"
/db_xref="CDD:234659"
misc_feature complement(374397..374537)
/gene="rplI"
/locus_tag="Caci_0334"
/note="Ribosomal protein L9, N-terminal domain; Region:
Ribosomal_L9_N; pfam01281"
/db_xref="CDD:201708"
misc_feature complement(374097..374357)
/gene="rplI"
/locus_tag="Caci_0334"
/note="Ribosomal protein L9, C-terminal domain; Region:
Ribosomal_L9_C; pfam03948"
/db_xref="CDD:146531"
gene complement(374568..374804)
/locus_tag="Caci_0335"
/db_xref="GeneID:8331662"
CDS complement(374568..374804)
/locus_tag="Caci_0335"
/inference="protein motif:TFAM:TIGR00165"
/note="TIGRFAM: ribosomal protein S18;
PFAM: ribosomal protein S18;
KEGG: sma:SAV_4287 30S ribosomal protein S18"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S18"
/protein_id="YP_003111129.1"
/db_xref="GI:256389565"
/db_xref="InterPro:IPR001648"
/db_xref="GeneID:8331662"
/translation="MPKAPLRKPKKKVCGFCKDKVAYVDYKDTTLLRKFISDRGKIRA
RRVTGNCTQHQRDVAVAVKNSREMALLPYTSTTR"
misc_feature complement(374577..374804)
/locus_tag="Caci_0335"
/note="30S ribosomal protein S18; Reviewed; Region: rpsR;
PRK00391"
/db_xref="CDD:178997"
gene complement(374899..375558)
/locus_tag="Caci_0336"
/db_xref="GeneID:8331663"
CDS complement(374899..375558)
/locus_tag="Caci_0336"
/inference="protein motif:TFAM:TIGR00621"
/note="TIGRFAM: single-strand binding protein;
PFAM: single-strand binding protein/Primosomal replication
protein n;
KEGG: sgr:SGR_3673 single-strand DNA- binding protein"
/codon_start=1
/transl_table=11
/product="single-strand binding protein"
/protein_id="YP_003111130.1"
/db_xref="GI:256389566"
/db_xref="InterPro:IPR000424"
/db_xref="InterPro:IPR011344"
/db_xref="GeneID:8331663"
/translation="MAGETVITVVGNLTDDPELRFTPSGAAVANFTVASTPRTLDRQT
NEWKDGDALFLRCSIWRQAAENVAESLTRGMRVIVSGRLRQRSYETKEGEKRTVVELD
VEEIGPSLKYATAKVTKANRPGGQGGPGGGGGGGWSGNSGGGGNSGSAGGGGGWGGNS
GGGGNSGGGGGGGGSWGGNSGGGGGNSGGGNQGGGNDPWASGGGGDGGWGGYGNDEPP
F"
misc_feature complement(<375229..375540)
/locus_tag="Caci_0336"
/note="Single-stranded DNA-binding protein [DNA
replication, recombination, and repair]; Region: Ssb;
COG0629"
/db_xref="CDD:223702"
misc_feature complement(375235..375540)
/locus_tag="Caci_0336"
/note="SSB_OBF: A subfamily of OB folds similar to the OB
fold of ssDNA-binding protein (SSB). SSBs bind with high
affinity to ssDNA. They bind to and protect ssDNA
intermediates during DNA metabolic pathways. All bacterial
and eukaryotic SSBs studied to date...; Region: SSB_OBF;
cd04496"
/db_xref="CDD:239942"
misc_feature complement(order(375262..375264,375271..375273,
375304..375306,375331..375333,375394..375396,
375400..375402,375448..375456,375529..375540))
/locus_tag="Caci_0336"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:239942"
misc_feature complement(order(375253..375255,375259..375261,
375298..375303,375307..375309,375313..375315,
375337..375342,375379..375381,375385..375387,
375391..375393,375397..375399,375403..375408,
375445..375450,375469..375471,375499..375501,
375517..375525))
/locus_tag="Caci_0336"
/note="ssDNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:239942"
misc_feature complement(order(375238..375240,375319..375321,
375325..375327,375331..375333))
/locus_tag="Caci_0336"
/note="tetramer (dimer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:239942"
gene complement(375589..375894)
/locus_tag="Caci_0337"
/db_xref="GeneID:8331664"
CDS complement(375589..375894)
/locus_tag="Caci_0337"
/inference="protein motif:TFAM:TIGR00166"
/note="TIGRFAM: ribosomal protein S6;
PFAM: ribosomal protein S6;
KEGG: sco:SCO3906 30S ribosomal protein S6"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S6"
/protein_id="YP_003111131.1"
/db_xref="GI:256389567"
/db_xref="InterPro:IPR000529"
/db_xref="GeneID:8331664"
/translation="MRQYEVMVILDPDLDERSIAPALEGFLKVIRDLGGSIEKNDIWG
RRRLAYEIKTKSGKKVSEGIYAVVDVQATPDAVKEFDRQANLSETVVRTKVIRPDQR"
misc_feature complement(375598..375894)
/locus_tag="Caci_0337"
/note="30S ribosomal protein S6; Reviewed; Region: rpsF;
PRK00453"
/db_xref="CDD:179034"
gene 376147..376506
/locus_tag="Caci_0338"
/db_xref="GeneID:8331665"
CDS 376147..376506
/locus_tag="Caci_0338"
/inference="similar to AA sequence:KEGG:SAV_4290"
/note="KEGG: sma:SAV_4290 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111132.1"
/db_xref="GI:256389568"
/db_xref="GeneID:8331665"
/translation="MTQTTPGTGDYGPEVAGRPGSTAADYAEDPKERPGFHIGSHTQE
MALTITALVLAVVAAAMIGWTGGHVLGGWIALAGIVVGLYAQLTSDTTYERMVNVCAI
GIAAVAFAFHLHHGGLW"
gene 376634..377422
/locus_tag="Caci_0339"
/db_xref="GeneID:8331666"
CDS 376634..377422
/locus_tag="Caci_0339"
/inference="protein motif:TFAM:TIGR00587"
/note="Assists in DNA repair by cleaving phosphodiester
bonds at apurinic or apyrimidinic sties to produce new 5'
ends that are base-free deoxyribose 5-phosphate residues"
/codon_start=1
/transl_table=11
/product="endonuclease IV"
/protein_id="YP_003111133.1"
/db_xref="GI:256389569"
/db_xref="InterPro:IPR001719"
/db_xref="InterPro:IPR012307"
/db_xref="GeneID:8331666"
/translation="MAMRIGSHVGNEDPIAEAVARGADAVQIFLGDPQSWKAPTVAYP
GGASALRAAAEQADVAVYVHAAYIINVAATNNRIRIPSRKLLQQTVALAAEAGARGVV
VHGGHSTAADAPDAGFDNWRKAVDQLEQHCPVFIENTAGGDHAMARRIDAIAKLWDAV
GHSGIGLCLDTCHAFAGGIPLESAVADIKAVTGRVDLVHANDSQGGFDSGIDRHANFG
SGEIAPADLIAQVIAEAGCPAICETPGGAEAQAADIKWLRERVA"
misc_feature 376640..377416
/locus_tag="Caci_0339"
/note="endonuclease IV; Provisional; Region: PRK01060"
/db_xref="CDD:179214"
misc_feature 376646..377413
/locus_tag="Caci_0339"
/note="AP endonuclease family 2; These endonucleases play
a role in DNA repair. Cleave phosphodiester bonds at
apurinic or apyrimidinic sites; the alignment also
contains hexulose-6-phosphate isomerases, enzymes that
catalyze the epimerization of...; Region: AP2Ec; cl12060"
/db_xref="CDD:245856"
misc_feature order(376655..376657,376718..376720,376832..376834,
377357..377359)
/locus_tag="Caci_0339"
/note="AP (apurinic/apyrimidinic) site pocket; other site"
/db_xref="CDD:237986"
misc_feature order(376727..376741,376832..376837,376841..376843,
376850..376852)
/locus_tag="Caci_0339"
/note="DNA interaction; other site"
/db_xref="CDD:237986"
misc_feature order(376823..376825,376943..376945,377042..377044,
377141..377143,377150..377152,377228..377230,
377267..377269,377273..377275,377357..377359)
/locus_tag="Caci_0339"
/note="Metal-binding active site; metal-binding site"
/db_xref="CDD:237986"
gene 377432..378616
/locus_tag="Caci_0340"
/db_xref="GeneID:8331667"
CDS 377432..378616
/locus_tag="Caci_0340"
/inference="protein motif:PFAM:PF02388"
/note="PFAM: methicillin resistance protein;
KEGG: sma:SAV_4291 hypothetical protein"
/codon_start=1
/transl_table=11
/product="methicillin resistance protein"
/protein_id="YP_003111134.1"
/db_xref="GI:256389570"
/db_xref="InterPro:IPR003447"
/db_xref="GeneID:8331667"
/translation="MVLRVRTLSREEHVAFIEERTAEKNAATSVSFLQCPSWGDLKTD
WRAESVGWVEDASGEVVGAALVLYRDVPIPKRDKLPFLRRSLAYLPEGPILDLTSADA
GQALKLLVAHLRKRRAFTVKMGPQMVSRRWTSETLKKAIAETEGGVRLKDIKPDFEDP
TALSIIEKLRATGWSRKESEGAGFGDFQPRYVFQLPLVDESGKPRTLEDIQKGFNQLW
RRNIKKADKNGVEVTLGGYDDLAEFHKIYEVTAVRDHFTPRPLAYFQRMWKAMEAENP
NRLRLYLARHEGELLAATTLVTVGDHAWYSYGASADHKRELRPSNAIQWRMLSDSHAS
GCKVYDLRGISDTLDPNDHLFGLIQFKLGTGGQAVEYLGEWDYALNPVLHRAFEMYMA
RR"
misc_feature 377453..378595
/locus_tag="Caci_0340"
/note="FemAB family; Region: FemAB; pfam02388"
/db_xref="CDD:217011"
misc_feature 378083..378454
/locus_tag="Caci_0340"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_6; pfam13480"
/db_xref="CDD:222164"
gene 378675..379733
/locus_tag="Caci_0341"
/db_xref="GeneID:8331668"
CDS 378675..379733
/locus_tag="Caci_0341"
/inference="protein motif:PFAM:PF01168"
/note="PFAM: alanine racemase domain protein;
KEGG: sco:SCO3903 hypothetical protein"
/codon_start=1
/transl_table=11
/product="alanine racemase domain-containing protein"
/protein_id="YP_003111135.1"
/db_xref="GI:256389571"
/db_xref="InterPro:IPR001608"
/db_xref="GeneID:8331668"
/translation="MSLTLHIDAERWRAHQDEVLARHPDLVPVAKGVNGYGIGIPNLM
QAASKLAAAGVEITAVGTAAEAEQAKDHYSGRLLVLTPYLIGEDVRDLPDRVIRTVAS
VEAVEALLGRRVVIDLMTSMRRFGLEKQDIPRLHAALESDQARVEGFSVHMPLDRVAG
DYLREVSDWVDALVAAGIPVRTLFVSHLSPDEISTLAKRHQGTTVRPRIGTQLWLGDR
KALQARGTVHSVQKVSKGDRFGYRQHKARGDGHLLVVSGGTAHGVGLENPKNFGRGPA
GLTPRAKFAARAAMALLNRTMSPYSWQGKTLWFAEPPHMQVSVLFLPAGVAPPKVGEE
IPVEVSPVMTHVDRVVFD"
misc_feature 378693..379295
/locus_tag="Caci_0341"
/note="Alanine racemase, N-terminal domain; Region:
Ala_racemase_N; pfam01168"
/db_xref="CDD:216340"
misc_feature order(378759..378761,378765..378767,378912..378914,
379029..379031,379119..379121,379128..379130,
379290..379301)
/locus_tag="Caci_0341"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143484"
misc_feature 378765..378767
/locus_tag="Caci_0341"
/note="catalytic residue [active]"
/db_xref="CDD:143484"
gene complement(380045..381613)
/locus_tag="Caci_0342"
/db_xref="GeneID:8331669"
CDS complement(380045..381613)
/locus_tag="Caci_0342"
/inference="similar to AA sequence:KEGG:SAV_4147"
/note="KEGG: sma:SAV_4147 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111136.1"
/db_xref="GI:256389572"
/db_xref="GeneID:8331669"
/translation="MSSTSKFLRDLAKKTNTASAARAVLRATHLKSGPGRLSDPRVGL
PASVLPAGGNRITAENAKAGSADWRMGASKSRPGTDYERQIKGYASTDSVAAGEAIDF
HIAVEPAGSFTVSVYRLGYYGGASARRVLVSPTLTAAPQPVPTPDQETGRIALEWPVA
WTLDIPKDWTPGTYVAVLDKADGFRNYVPFVVRDDEASADFLVVLPSTSWQAYNWWPR
DGITGRNVYYGYVTKEAAESDAALKAKFSTDARGWISNPARATQVSFARPYFADGLPD
GFVREQSFIQWAEGMGYDLSYATGLDLHAGRIDPTKYRGLIFAGHDEYWSTDMYRHAE
EAVAAGTSLAFLTANNAYWHVRYDEHTRTMSCYKGFEDPHTEDFPTGMWRAGEGNPRA
EQQLMGVQYSGILKGRHPLIVHEADHWFWSGTGLTNGDEIPGLLGGEADSLFEAMPRA
KAEEQALLTASPYTISNGTNFTQNTSIYRSPSGAWVFTAGTFLWPLGLGHPTYQDKRI
TRATANFLSRVKGS"
gene complement(381644..382711)
/locus_tag="Caci_0343"
/db_xref="GeneID:8331670"
CDS complement(381644..382711)
/locus_tag="Caci_0343"
/inference="similar to AA sequence:KEGG:SGR_3221"
/note="KEGG: sgr:SGR_3221 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111137.1"
/db_xref="GI:256389573"
/db_xref="GeneID:8331670"
/translation="MAVLTWISAWVFVAGPTKQGSLLARWDRWDEGIFTSVAQHWYFA
AGTDPRHVAFFPGFPIAMWLAHLVVWNWIAAGLVVSAAAGAIATMALGRLARDEVDAS
NADADAGQAAANATLFFVLAPAAVFLAAGYSESLFAAFAFSAWVAARRDRWWLAGLLA
AGASTVRVNGLFLAAAIALEFILAGRERRQWRQAPLLVIPALPVIAYVVYLHHETGDW
LAWQHAQAAGWFRTFQSPESAWNQTWRAAFGGTQAGHTAWVFQLELIAVVIGLALTAL
LLLKRRWPEALYVALSLLALGTTTWFMSVPRAMLLWWPLWTMLGAWAARRPMVRTLYV
CCVAPVMVGVALLFLSGQWAG"
gene complement(382884..384455)
/locus_tag="Caci_0344"
/db_xref="GeneID:8331671"
CDS complement(382884..384455)
/locus_tag="Caci_0344"
/inference="similar to AA sequence:KEGG:SCO3902"
/note="KEGG: sco:SCO3902 integral membrane protein"
/codon_start=1
/transl_table=11
/product="integral membrane protein"
/protein_id="YP_003111138.1"
/db_xref="GI:256389574"
/db_xref="GeneID:8331671"
/translation="MQTGDGAVGHDVQVSSDVSDQAPGPSAEPTGRGAATAPVIVAPS
LDDPVVNAASDAVGGPLGVRAWRPRLGSGAAIRTVARVLVLLTLLTLGIGVAQRSPCY
STAWNGTGKQQYNHLCYTDVPYMYYGRGFDKSLTPYRQSDPASGNYGLEYPVVAGATM
ETAALLAQKLGADTPDQVRWFYNVTTWFLIVFALVCVLAVIGLAGRRPWDAAMFALAP
GLLLTGTINWDLIAVALASVGMLAWARNKPVVAGIALGLGSATKLYPVFLLIPLLVLC
WRAGRMRQWSQATGTAVVTWLVVNAPVMILAFKGWKYFFTFNDNRPIDLGSPWFAIRH
WWGWEPPNKNVVIIALVLAGWLGVALLGLMARRRPRFAQLAFLTVAVFILLNKVYSPQ
YVLWLIPLAALARPRWRDFLIWQICEAAYYVAVWYYLVWQAGPSNGNTRGLPDNFYVW
AIVIHLAGIVYMMVQIIRDILDPRRDPVRADGIDDDPAGGALSDSPDVWAWSQPRSHR
AGHGAGAEPELVASV"
misc_feature complement(<383229..384119)
/locus_tag="Caci_0344"
/note="Predicted integral membrane protein [Function
unknown]; Region: COG5650"
/db_xref="CDD:227937"
gene complement(384476..387439)
/locus_tag="Caci_0345"
/db_xref="GeneID:8331672"
CDS complement(384476..387439)
/locus_tag="Caci_0345"
/inference="protein motif:PFAM:PF00912"
/note="PFAM: glycosyl transferase family 51; penicillin-
binding protein transpeptidase;
KEGG: sma:SAV_4294 penicillin-binding protein"
/codon_start=1
/transl_table=11
/product="glycosyl transferase family protein"
/protein_id="YP_003111139.1"
/db_xref="GI:256389575"
/db_xref="InterPro:IPR001264"
/db_xref="InterPro:IPR001460"
/db_xref="GeneID:8331672"
/translation="MSEHGSRRGGGGGGGSRGRRSAGGGGFSDKLDGLAHQLSGMFGK
RGAGRRGDDGYDEYGSYDDRGYGEEPYDDGYGAEPADVAVGGRRGLGRRTAAGSGGAG
RGGRPGGSGRKDGLPPKDWWMKFINYPRYGKRGWRHWMPSIKQVLSIFLGFLFVVIGG
VAYVYASTQIPQVKNSIAAGNPTYYTYDDGKEQFANIGVNYYQVNDINTIPKVFQNAF
VAAENYSFWSDPGVSFTGVARSALNDLFGSGGTQGGSTITQQYVKNAYLSQDQTLGRK
VNEIMISIKLNHTESKQQILLGYLNQISFGRGAYGIDAASRAYFGHPINQMTDANVGE
AAFLAALVNDPSNFSTALANGKARTDNPKTFDRFEKRYNAILANMSQYGFVPKTTTAP
LENKLPNVIDFKGPNLGQYVGYMKDAATAFLAAQMQEYPSDPTTQKYANIDNLSKGGY
KIVTTYNHVMMNDSVTAANALWTGTSGGGGGKLNPKHASDHDIHLAFASVDPHTGELK
SFYTGTDGKEDYGSNAFNYALQGGVQVGSTFKPITLATALQSGKFSLDSQEPGTNEKP
LFLPGSKQPITFYDTSLHKTAFWPPNEDEEAPPNGGSTTLKQGLAMSLNSVFAALELD
PAVGMDAVYNMAEQLGIKPGTPDFLKVASLTLGTAEITPMRMANVYGAFANGGVSHEP
VQVTAIIDQRTGQTVWTPPALRSNSGVNKQVMSVNTAAGVTNALQSVLQKGGTANANH
DAAALAAEANYNLAGKTGTTDSNHSAWFTGFSTSLATSVAIFRSTADGTLESIKGLGY
NDQSTRINGMDWPTTVWSAFMKIELDKNKSGFAKPFPPYAPTCSGVSDIPSFPNQSVA
PGTLASGSLPGTPTGSEANCQSVFVPTPTPTPTPTPTKPTTSTQAPLCTLPMVFDPAS
QQCVVVPPTSTDTSTQQQPTGTGTSNPTGPGQPTTSPTTPSSRCSRNPQQPGCQTTSP
TTSSTSSLSGFPPAG"
misc_feature complement(384815..386992)
/locus_tag="Caci_0345"
/note="Membrane carboxypeptidase (penicillin-binding
protein) [Cell envelope biogenesis, outer membrane];
Region: MrcB; COG0744"
/db_xref="CDD:223815"
misc_feature complement(386303..386866)
/locus_tag="Caci_0345"
/note="Transglycosylase; Region: Transgly; pfam00912"
/db_xref="CDD:201501"
misc_feature complement(385127..385954)
/locus_tag="Caci_0345"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; cl17760"
/db_xref="CDD:248314"
gene 387837..388442
/locus_tag="Caci_0346"
/db_xref="GeneID:8331673"
CDS 387837..388442
/locus_tag="Caci_0346"
/inference="protein motif:PFAM:PF03551"
/note="PFAM: transcriptional regulator PadR family
protein;
KEGG: sco:SCO3900 hypothetical protein"
/codon_start=1
/transl_table=11
/product="PadR family transcriptional regulator"
/protein_id="YP_003111140.1"
/db_xref="GI:256389576"
/db_xref="InterPro:IPR005149"
/db_xref="GeneID:8331673"
/translation="MAKRSQILELAVLGLLHEHPMHGYELRRQLNVQLGAFRALSYGT
LYPCLKDLVARGWIAEDDTQTANVAASRRAKISYKLTAEGKERFQELMTTSGSAAWED
DNFGVHFAFFGRTNAGVRIRILEGRRSRLEERMEAVRTSLARSRDRLDSYTLELQRHG
LESTEREVRWLNELIRTEHEQAFPAPPQQQPQQGSPEPRPS"
misc_feature 387837..388292
/locus_tag="Caci_0346"
/note="Predicted transcriptional regulators
[Transcription]; Region: COG1695"
/db_xref="CDD:224609"
misc_feature 387870..388106
/locus_tag="Caci_0346"
/note="Transcriptional regulator PadR-like family; Region:
PadR; pfam03551"
/db_xref="CDD:217610"
gene 388574..389653
/locus_tag="Caci_0347"
/db_xref="GeneID:8331674"
CDS 388574..389653
/locus_tag="Caci_0347"
/inference="protein motif:TFAM:TIGR03450"
/note="TIGRFAM: inositol 1-phosphate synthase;
PFAM: myo-inositol-1-phosphate synthase; myo-
inositol-1-phosphate synthase GAPDH domain protein;
KEGG: sco:SCO3899 hypothetical protein"
/codon_start=1
/transl_table=11
/product="inositol 1-phosphate synthase"
/protein_id="YP_003111141.1"
/db_xref="GI:256389577"
/db_xref="InterPro:IPR002587"
/db_xref="InterPro:IPR013021"
/db_xref="InterPro:IPR017815"
/db_xref="GeneID:8331674"
/translation="MGSVRVAIIGVGNCAASLVQGVEYYKDADPNAKVPGLMHVQFGD
YHVSDLEFVAAFDVDAKKVGLDLADAIGASENNTIKIADVPPTGVVVQRGHTNDGLGK
YYRQTIVESDAEPVDMVAALKAAKADVVVCYLPVGSQSAVEYYAQVAIDAKVAFVNAL
PVFIAGTKAWADKFEAAGVPIVGDDIKSQVGATITHRVLAKLFEDRGVVLDRTMQLNV
GGNMDFMNMLERERLESKKISKTQAVTSQLSHDLGAGNVHIGPSDYVAWLDDRKWAYV
RLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRCAKIALDRGIGGPILSASSYFMK
SPPVQYFDDEARDAVEAFIKGEVER"
misc_feature 388583..389638
/locus_tag="Caci_0347"
/note="Myo-inositol-1-phosphate synthase [Lipid
metabolism]; Region: INO1; COG1260"
/db_xref="CDD:224180"
misc_feature 388583..389632
/locus_tag="Caci_0347"
/note="Myo-inositol-1-phosphate synthase; Region:
NAD_binding_5; cl00554"
/db_xref="CDD:241944"
gene 389821..392364
/locus_tag="Caci_0348"
/db_xref="GeneID:8331675"
CDS 389821..392364
/locus_tag="Caci_0348"
/inference="protein motif:PFAM:PF04122"
/note="PFAM: cell wall binding repeat 2- containing
protein;
KEGG: ace:Acel_1461 cell wall binding repeat 2- containing
protein"
/codon_start=1
/transl_table=11
/product="cell wall binding repeat 2-containing protein"
/protein_id="YP_003111142.1"
/db_xref="GI:256389578"
/db_xref="InterPro:IPR007253"
/db_xref="GeneID:8331675"
/translation="MGRKREISVISSLVVAGAAFGGSVVSAPTASAASITVSASGADV
VAINPAMFGGGAPTDQVSTQLAQILRNSARYLGTTWYNQTYGNSLASDGYLNLDIPGA
VPEQSFRLPGMAAVSIATAVKLGDWDAGASGISADEAENRAATMVRALAHRYYANNSL
AGVSTWGNSWQSPLWAFYTGQAAWLVWDKLSPSERNDVARMMADEANRLLTGNDVYLT
SDTGSQQLYQYNRGGTDVTPGDTKAEEDNYEAQLLGLAVAMMPNHPNAARWQRRNEDL
LIADTATPDDLTNSAAGNAVVNGRQLNQWLQGYNMQADGTVQNHDILHPLYMTALDQS
LQQVGTFALAGQCAPQAATNNVGLTYKALTTQTSFPYAPDPNNLTQDVTAKTPDGKPI
YESTSSPQINYPQGNDWGTQFPAYYGSFDALVSAYSPYLVGENNQAPTATANAVTHLQ
SEISLQSRFGDGQTYQPWNPATTPGDKAENSYVGAEQRVGQITAQAYMAEFLNHHSRG
CFTNSGNPTPPNVPPVQPTAVSRLSGTDRYGTGVAVSQAQWSNAGGDNTPRAIADAVV
LARGDNFPDALAGTPLAKRDRGPLLLTEPGALNPVTANEIKRVLPKGKTVYILGGNQA
VSPKVQSQLVALGYTVKRFGGSDRYQTALLIAQQGMGSPHQVVVATGQDFADALAAGP
LAADEGNAILLSNGKTLDANTKAYIAGAQRKNGAADPAFHLNAVGGAAVAATHYLGSQ
SHALMGNDRYQTAAAVAARFAADMPVTQFGVATGTQFADALTGGAFMANANEPLLLTA
PTALAPSDTTLLHGMRSQLSAVTLFGGPVALKQAVMDQIAHAVGGVERR"
sig_peptide 389821..389919
/locus_tag="Caci_0348"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.877 at
residue 33"
misc_feature 391411..391716
/locus_tag="Caci_0348"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
misc_feature 391741..392013
/locus_tag="Caci_0348"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
misc_feature 392050..>392193
/locus_tag="Caci_0348"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
gene 392494..393327
/locus_tag="Caci_0349"
/db_xref="GeneID:8331676"
CDS 392494..393327
/locus_tag="Caci_0349"
/inference="protein motif:PFAM:PF07920"
/note="PFAM: protein of unknown function DUF1684;
KEGG: sco:SCO1747 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111143.1"
/db_xref="GI:256389579"
/db_xref="InterPro:IPR012467"
/db_xref="GeneID:8331676"
/translation="MSETEQTATIPAAPADWYQWAEKREASVSGEYGVLALVGTHWLD
EGPAVSIDGLPGLWAAAGHRVSVTALPADALLVDGVPVDGVRFLDPDLALDPSVLFHH
GRKLVPIIREGVLALRVYDPEAENRRSFAGISRFPYDPALVFTARYERYVHGHVERVL
NADGKERGLALNGDLVFEHGGAEYRLAVTANGGEDFDVTFGDATNGPDTFGFRQLTVP
APHLDDPDNPDSGTTVLDFNRAQLPPCAFSDHFICPVPPVGNRLELAVAAGEKRREVR
T"
misc_feature 392872..393309
/locus_tag="Caci_0349"
/note="Protein of unknown function (DUF1684); Region:
DUF1684; pfam07920"
/db_xref="CDD:219642"
gene 393416..393871
/locus_tag="Caci_0350"
/db_xref="GeneID:8331677"
CDS 393416..393871
/locus_tag="Caci_0350"
/inference="protein motif:TFAM:TIGR00738"
/note="TIGRFAM: transcriptional regulator, Rrf2 family;
PFAM: protein of unknown function UPF0074;
KEGG: fre:Franean1_1175 BadM/Rrf2 family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="BadM/Rrf2 family transcriptional regulator
family"
/protein_id="YP_003111144.1"
/db_xref="GI:256389580"
/db_xref="InterPro:IPR000944"
/db_xref="GeneID:8331677"
/translation="MQISAKADYAVRVMLELAAHGPNLVKSTVLIDHQGLPRKFVESI
LVELRRADLIRSHRGAEGGYTLARPASAISIGQVIRAVDGPLAEVRGLRPHETEYSNA
AQHLSDVWVAARAALRKVLDETSLAHVLSGKLPAHVRRMAESPEAWLPR"
misc_feature 393416..393859
/locus_tag="Caci_0350"
/note="Predicted transcriptional regulator
[Transcription]; Region: COG1959"
/db_xref="CDD:224870"
misc_feature 393419..393661
/locus_tag="Caci_0350"
/note="Transcriptional regulator; Region: Rrf2; pfam02082"
/db_xref="CDD:202106"
gene complement(393958..394182)
/locus_tag="Caci_0351"
/db_xref="GeneID:8331678"
CDS complement(393958..394182)
/locus_tag="Caci_0351"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111145.1"
/db_xref="GI:256389581"
/db_xref="GeneID:8331678"
/translation="MRKFATFAALALSAGTAVAGGACVANADVNLGVDAPTTSTAPAA
GSMDFAGTWCGAPWLWSGQQAGAGCNAQGH"
sig_peptide complement(394099..394182)
/locus_tag="Caci_0351"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.660 at
residue 28"
gene complement(394286..397018)
/locus_tag="Caci_0352"
/db_xref="GeneID:8331679"
CDS complement(394286..397018)
/locus_tag="Caci_0352"
/inference="protein motif:PFAM:PF09286"
/note="PFAM: peptidase S53 propeptide;
KEGG: sma:SAV_5949 serine protease"
/codon_start=1
/transl_table=11
/product="peptidase S53 propeptide"
/protein_id="YP_003111146.1"
/db_xref="GI:256389582"
/db_xref="InterPro:IPR000209"
/db_xref="InterPro:IPR015366"
/db_xref="GeneID:8331679"
/translation="MVGRFRHVTATLAVAALMAAPNAVSAATTSVTAADGPTTARIGL
AGADPDGLQQLARAVADPHSTQYRHFLTPAQLQAKYGPTPAQLKQVHQWLTTGGLTIT
GENAHWIDVAGSSAKVRKAFGHLPQLRIRQGIGAGYAARAAATVPPALAGAVSSVAGL
MPERQGMRQFSYRVMTGARSRALTGGGVDPGGPMQPAQPAAPGGQGGQGGPLQPTQGT
QVNPGGPMQPAQPAAPGTQGGQNGPVQPTLGTQINPGGPMQPAQPAAPGTQGSQGGPV
QPTSGAQPAQPAAPGTQRASVQQAPRTQINPGGPMQPAQPAQPAAPGTQRASMQQAPR
TQINPGGLMRPATREMPAAQVDPGGPMQPSAPVMPAPKGPVGSGGAGGGVNPGGPMQP
SGPAGSAGPVGPIVVGGPIRRSLPGGAGGLVSPSVSSTACSADWGASPAVGVPEGYNK
PDPLVACGLTPKRLRAAYGVTAAGFSGRGAIIGIVDAYGSPTMRADADAFAKSVGDLA
FGAGQYMESVDRGAWKHLGDGVCETPAAWGGEEALDVEVAHGLAPGAVVHYFGAASCQ
DQDIAAMLASIVDKHLADEVTGSFGEIMHSAGGDIDPALVMQENQIFTTGAAEGIGFA
FATGDCGDQAAGLSGPGCDTGSARAQVEWPAASPWVTAVGGTALAVAPNGTRRWEAPM
GDLRSDLSADGSKWAPLPGQFFFGGGGGLSGDFDQPAYQKGVVPADLASPVVGGKATG
KASGTASGKAASTAVGPAKRTVPDVAMDGDLLTAVLTGHTDPTLGGYGQDVIGGTSAA
APMFAAVQADAMQAAGGALGFANPALYKRSGTKQFTDIVAGPKGAPNPISAVVDHGTF
GDVHEARLFKLGADHGLSARKGYDTATGLGSPTAAYITSFKPAPSKTGTGKKKP"
sig_peptide complement(396938..397018)
/locus_tag="Caci_0352"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.780 at
residue 27"
misc_feature complement(<396650..396904)
/locus_tag="Caci_0352"
/note="Activation domain of S53 peptidases; Region:
Pro-peptidase_S53; cd11377"
/db_xref="CDD:206778"
misc_feature complement(order(396791..396793,396800..396802,
396806..396811,396851..396853,396860..396865,
396881..396883,396887..396892,396896..396898))
/locus_tag="Caci_0352"
/note="peptidase domain interface [polypeptide binding];
other site"
/db_xref="CDD:206778"
misc_feature complement(394343..395647)
/locus_tag="Caci_0352"
/note="Peptidase domain in the S53 family; Region:
Peptidases_S53; cd04056"
/db_xref="CDD:173788"
misc_feature complement(order(394631..394633,395132..395137,
395141..395143,395243..395254,395387..395389,
395399..395401))
/locus_tag="Caci_0352"
/note="active site"
/db_xref="CDD:173788"
misc_feature complement(order(394631..394633,395387..395389,
395399..395401))
/locus_tag="Caci_0352"
/note="catalytic triad [active]"
/db_xref="CDD:173788"
misc_feature complement(order(394379..394381,394391..394393,
394511..394516))
/locus_tag="Caci_0352"
/note="calcium binding site [ion binding]; other site"
/db_xref="CDD:173788"
gene complement(397134..398669)
/locus_tag="Caci_0353"
/db_xref="GeneID:8331680"
CDS complement(397134..398669)
/locus_tag="Caci_0353"
/inference="protein motif:TFAM:TIGR00711"
/note="TIGRFAM: drug resistance transporter EmrB/QacA
subfamily;
PFAM: major facilitator superfamily MFS_1;
KEGG: fre:Franean1_3555 EmrB/QacA family drug resistance
transporter"
/codon_start=1
/transl_table=11
/product="EmrB/QacA subfamily drug resistance transporter"
/protein_id="YP_003111147.1"
/db_xref="GI:256389583"
/db_xref="InterPro:IPR001411"
/db_xref="InterPro:IPR004638"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331680"
/translation="MRKWLPLVAVCLGTFMLLVDVTIVTVALPDMARSLDTTFADLQW
VMDVYALVLAALLLAAGSLGDRAGHRRLYVAGLVVFAAASLACGLATSPGVLIAFRAV
QGVGGAAMLATTVALISHLYSGRDLGTAFGVWGAVSGAAAAAGPIMGGLLTQHLDWRW
IFFVNLPISVAAVAMTLRYVGESRGERRRGLDLPGLLTFTAAAGLATYALIKGNDYGW
GSARTIGVFAGAAVALVAFVVAELRVRTPLLDLSLFRRGTFTGVMIGALLLSGAAFSY
FAYESLWLQSALGMSPVTAGLCFVPMSGAAFVTAGLGGRLLEDRLSPRVMIGGGLLLI
AAGSAAQMLVSAGSSWTVLVPGLVVSGVGVGLATPTLVSTAVAAVGYQRAGMASGAVN
TARQLGNALGIAVLGVVFHAGLASSVRGAGVPQSAAVADALAAGQTRGVLASGPAAQR
PALEHMVHAAFASGLRSAFLAAAVMGAVGGLAVLALVRRPGGGHAPGEQSSAANVPIP
AEA"
sig_peptide complement(398610..398669)
/locus_tag="Caci_0353"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.905) with cleavage site probability 0.679 at
residue 20"
misc_feature complement(397287..398666)
/locus_tag="Caci_0353"
/note="methyl viologen resistance protein SmvA;
Provisional; Region: PRK14995"
/db_xref="CDD:184957"
misc_feature complement(<398130..398651)
/locus_tag="Caci_0353"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(398244..398246,398262..398267,
398274..398279,398313..398315,398322..398327,
398334..398339,398346..398351,398487..398492,
398496..398501,398511..398513,398520..398525,
398532..398534,398583..398588,398592..398600,
398607..398609))
/locus_tag="Caci_0353"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 398804..399820
/locus_tag="Caci_0354"
/db_xref="GeneID:8331681"
CDS 398804..399820
/locus_tag="Caci_0354"
/inference="protein motif:PFAM:PF01037"
/note="PFAM: regulatory protein AsnC/Lrp family;
SMART: regulatory protein AsnC/Lrp family;
KEGG: sma:SAV_1846 transcription regulator AsnC"
/codon_start=1
/transl_table=11
/product="AsnC family transcriptional regulator"
/protein_id="YP_003111148.1"
/db_xref="GI:256389584"
/db_xref="InterPro:IPR000485"
/db_xref="GeneID:8331681"
/translation="MSTDQRVEEFDRLDRQLAQALMIDGRASFSRLAEVLGVTDQTVT
RRYRRLRSGGLLRVIGLPLGNRVGLYQSNVRVQCVPGAAGAIADALARRRDIGWVTIN
ASGTEVSCMTRSPSRRERDLLLLDKLPRTRQVTGVSVKTIMHAFVGGPGGWPGLAADL
GADQAAALHRDFPEVPGEFELDDADHALLAVLARDGRAPYPELAAAVGKSESTVRRRV
EHLMDNGVLYFDVEVLPVHLGFHVEAMVSAAVAPSDLDAVGRAVGSHPEVPFAAATTG
PTNLAAVVVCREIQDLYEYVTGRMGAIKEIGQLEVVQVLRTVKRAGLLTDGVRLFDPP
ETVY"
misc_feature 398834..>398932
/locus_tag="Caci_0354"
/note="AsnC-type helix-turn-helix domain; Region:
HTH_AsnC-type; pfam13404"
/db_xref="CDD:205582"
misc_feature 399389..399760
/locus_tag="Caci_0354"
/note="Transcriptional regulators [Transcription]; Region:
Lrp; COG1522"
/db_xref="CDD:224439"
misc_feature <399389..399466
/locus_tag="Caci_0354"
/note="AsnC-type helix-turn-helix domain; Region:
HTH_AsnC-type; pfam13404"
/db_xref="CDD:205582"
misc_feature 399557..399754
/locus_tag="Caci_0354"
/note="AsnC family; Region: AsnC_trans_reg; pfam01037"
/db_xref="CDD:216258"
gene complement(399928..400599)
/locus_tag="Caci_0355"
/db_xref="GeneID:8331682"
CDS complement(399928..400599)
/locus_tag="Caci_0355"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: sco:SCO4536 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111149.1"
/db_xref="GI:256389585"
/db_xref="GeneID:8331682"
/translation="MSTAAETAGSKPINYRLNLGEGWTRIRLDDHAEADVNAFLDTVF
AAVPADAAEAGRDLIGGRLTTQIVAGRAKGGIDFYIPTPGGGPVPALTVMASEVKIPS
AAVPEPADVVARVAASNPTARTGVIAGMPAVRIDRSAGAGLDAEPAGEDAEEDKDGFQ
PPRPRHIEYVVPVAGDPDHRWLSIALTGQAGPGGDEAKVDAAISRFDQAVADLAWTEG
EGSGA"
gene 400940..401581
/locus_tag="Caci_0356"
/db_xref="GeneID:8331683"
CDS 400940..401581
/locus_tag="Caci_0356"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111150.1"
/db_xref="GI:256389586"
/db_xref="GeneID:8331683"
/translation="MGAATALTLLGPAAASAAADTTPAPPAGVTVDVLGGSTPADEHA
AIDYTIELRDAGTVPYRHVAVTAMLPPGFHILRASPALAASAGPGSMPTWTADLLPGR
TVDIHAEITAGTVQDLAEAAEPLTGPSDVLDGSGPGSGSSSGAMAWYSLSACAQSGPS
GVPVCGLSRQLLVKTDDDTRRGIEAMVLILGVPLLVGGLGVYAWRARREPDMD"
sig_peptide 400940..400999
/locus_tag="Caci_0356"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.745 at
residue 20"
gene complement(401672..402214)
/locus_tag="Caci_0357"
/db_xref="GeneID:8331684"
CDS complement(401672..402214)
/locus_tag="Caci_0357"
/inference="similar to AA sequence:KEGG:Dgeo_2488"
/note="KEGG: dge:Dgeo_2488 integral membrane protein"
/codon_start=1
/transl_table=11
/product="integral membrane protein"
/protein_id="YP_003111151.1"
/db_xref="GI:256389587"
/db_xref="GeneID:8331684"
/translation="MDASVWIVNIVVLASVLGTDLGRRKVGMARLLRPAIVAAVIVPM
YVKHPATSGSGLVLELAAAALGLLLGLGAAALLKVRRNPSDGVIYTHAGVGYAALWTA
VIGARLLFVYGSNHWFTEQLGRWMTQHQISVDALTDALVVMAIAMLLGRTGTLAAKRR
TAVTGHVATGASAQRTQVVR"
gene 402413..402868
/locus_tag="Caci_0358"
/db_xref="GeneID:8331685"
CDS 402413..402868
/locus_tag="Caci_0358"
/inference="protein motif:TFAM:TIGR00738"
/note="TIGRFAM: transcriptional regulator, Rrf2 family;
PFAM: protein of unknown function UPF0074;
KEGG: sma:SAV_5952 hypothetical protein"
/codon_start=1
/transl_table=11
/product="BadM/Rrf2 family transcriptional regulator
family"
/protein_id="YP_003111152.1"
/db_xref="GI:256389588"
/db_xref="InterPro:IPR000944"
/db_xref="GeneID:8331685"
/translation="MHLMKSTDLALRLLMRLAVVPPDTHPDELPTTRGVAEAMGAAST
HMAKVVGKLQHLGLVQARRGRGGGLVLTPAGRVASVGAVVRTFEGSGDLAACVDGEDP
CPLNAACRLRSALRAAQEAFYASLDQLTVEDVTAAPTGPLLLSIAMGRP"
misc_feature <402482..>402625
/locus_tag="Caci_0358"
/note="Transcriptional regulator; Region: Rrf2; pfam02082"
/db_xref="CDD:202106"
misc_feature 402485..402853
/locus_tag="Caci_0358"
/note="Predicted transcriptional regulator
[Transcription]; Region: COG1959"
/db_xref="CDD:224870"
gene complement(402891..404087)
/locus_tag="Caci_0359"
/db_xref="GeneID:8331686"
CDS complement(402891..404087)
/locus_tag="Caci_0359"
/inference="protein motif:PFAM:PF00970"
/note="PFAM: oxidoreductase FAD-binding domain protein;
globin; oxidoreductase FAD/NAD(P)-binding domain protein;
KEGG: sgr:SGR_2266 flavohemoprotein"
/codon_start=1
/transl_table=11
/product="oxidoreductase FAD-binding domain-containing
protein"
/protein_id="YP_003111153.1"
/db_xref="GI:256389589"
/db_xref="InterPro:IPR000971"
/db_xref="InterPro:IPR001433"
/db_xref="InterPro:IPR008333"
/db_xref="GeneID:8331686"
/translation="MLSEQSAATVRATLPVVGAAIGDITERFYARLFQAHPELLRDLF
NRGNQAAGTQRLALAGSIAAFATQLVEQPGTRPDALLSRIAHKHASLGVSPAQYKVVH
QHLFAAIAEVLGDAVTPDVAAAWDEVYWLMAHALIAIEGRLSTERGYLVGGTWRDWEV
VGRREETADVASFLLRPVGGGTPQPFQAGQYVSVQVELPDGARQIRQYSLTSAPDAAV
RQIGVKRERGTDADPAGEVSNHLHDTVQPGHVLRISAPFGDLVVDAGASEQPLLLASA
GIGVTPMISILAELVNREHAAPVLVVHADRSPEAHALRSDQNILAAKLISGRTYYWYE
NDAGESGRVGLADLSDVEIPAGTAAFLCGPLPFMRAMREQLLAKGVPAADIHYEVFGP
DLWLAA"
misc_feature complement(402897..404087)
/locus_tag="Caci_0359"
/note="bifunctional nitric oxide
dioxygenase/dihydropteridine reductase 2; Provisional;
Region: PRK13289"
/db_xref="CDD:237337"
misc_feature complement(403680..404081)
/locus_tag="Caci_0359"
/note="Globins are heme proteins, which bind and transport
oxygen. This family summarizes a diverse set of homologous
protein domains, including: (1) tetrameric vertebrate
hemoglobins, which are the major protein component of
erythrocytes and transport oxygen...; Region: globin;
cd01040"
/db_xref="CDD:238510"
misc_feature complement(order(403692..403694,403785..403787,
403794..403796,403824..403829,403917..403919,
403926..403928,403956..403961,403971..403973,
404001..404003))
/locus_tag="Caci_0359"
/note="heme-binding site [chemical binding]; other site"
/db_xref="CDD:238510"
misc_feature complement(402906..403631)
/locus_tag="Caci_0359"
/note="FAD_NAD(P)H binding domain of flavohemoglobin.
Flavohemoglobins have a globin domain containing a B-type
heme fused with a ferredoxin reductase-like
FAD/NAD-binding domain. Flavohemoglobins detoxify nitric
oxide (NO) via an NO dioxygenase reaction. The...; Region:
flavohem_like_fad_nad_binding; cd06184"
/db_xref="CDD:99781"
misc_feature complement(order(402918..402920,403245..403247,
403374..403385,403416..403418,403422..403424,
403461..403472,403515..403517))
/locus_tag="Caci_0359"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99781"
misc_feature complement(order(403461..403466,403470..403472))
/locus_tag="Caci_0359"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99781"
misc_feature complement(order(403314..403316,403320..403322,
403344..403346,403365..403367,403374..403376,
403383..403385))
/locus_tag="Caci_0359"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99781"
misc_feature complement(order(403242..403244,403248..403259,
403269..403271))
/locus_tag="Caci_0359"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99781"
misc_feature complement(order(402996..403001,403170..403178,
403251..403256))
/locus_tag="Caci_0359"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99781"
misc_feature complement(402909..402911)
/locus_tag="Caci_0359"
/note="Heme binding pocket [chemical binding]; other
site"
/db_xref="CDD:99781"
gene complement(404219..404491)
/locus_tag="Caci_0360"
/db_xref="GeneID:8331687"
CDS complement(404219..404491)
/locus_tag="Caci_0360"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: saq:Sare_1411 vitamin B12-dependent
ribonucleotide reductase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111154.1"
/db_xref="GI:256389590"
/db_xref="GeneID:8331687"
/translation="MAQVRLPRQRSSETVSVRVGGYAGRVTVVRPDDRPPQVLLMAGG
HGSTVAGFADAIGTAISLGLANGAGFDDYRVALELVGLSADQLERE"
misc_feature complement(404273..>404479)
/locus_tag="Caci_0360"
/note="vitamin B12-dependent ribonucleotide reductase;
Validated; Region: PRK06556"
/db_xref="CDD:235828"
gene complement(404691..405515)
/locus_tag="Caci_0361"
/db_xref="GeneID:8331688"
CDS complement(404691..405515)
/locus_tag="Caci_0361"
/inference="protein motif:PFAM:PF01841"
/note="PFAM: transglutaminase;
KEGG: ret:RHE_PE00204 hypothetical protein"
/codon_start=1
/transl_table=11
/product="transglutaminase"
/protein_id="YP_003111155.1"
/db_xref="GI:256389591"
/db_xref="InterPro:IPR002931"
/db_xref="GeneID:8331688"
/translation="MAPLIDYRSPGLFTDVRGVEPAALRGVATDPVDLIRPVSRLVIQ
PHEAEAAGIAAERLAENQIRPAAVLVERLLAVDAAPLSEPREAGKRVVGTCRHFAVLA
CALLRNAGYAARARCGFATYFQPGQALDHWVIEYRLDDAAHWIRLDPETLGGSVLPNA
DDLSPGDFLTGAEAWAAYRRGEVDGATFGVHGTENFGPAEIKGNAVRDLAAMNKVETL
PWDEWGRMTDAYAGLTGEDYDALLDELAAACASDDDRALSELYRDPVFEVPAELLL"
misc_feature complement(405069..>405242)
/locus_tag="Caci_0361"
/note="Transglutaminase-like superfamily; Region:
Transglut_core; pfam01841"
/db_xref="CDD:216735"
gene complement(405526..406497)
/locus_tag="Caci_0362"
/db_xref="GeneID:8331689"
CDS complement(405526..406497)
/locus_tag="Caci_0362"
/inference="protein motif:PFAM:PF00561"
/note="PFAM: alpha/beta hydrolase fold protein;
KEGG: sma:SAV_3810 epoxide hydrolase"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold protein"
/protein_id="YP_003111156.1"
/db_xref="GI:256389592"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="InterPro:IPR003089"
/db_xref="GeneID:8331689"
/translation="MNKRSVMVGGLRMNVVEAGSGPDVVVLLHGFLNYSYSWRHQVRD
LAAAGYRVLAPDLRGYGETGCPEDVEQYSMLHLVADVVGLLDAFGIERATVVGHDWGS
VLAWHTALLRPDRVRGVVGLSVPYVPRADISLLTAMRERFGDLYYMQYFQEVGPADRE
LARDVAATFRSVLSSGSEPWNPVLPEGGGWLDCLPDKGIPDWLTAADLDAHVAAFERS
GFTGALNWYRNIDRNHELTAAWQGAKIQVPALFLYGTRDAFGRYASELIDDLPRSVPD
LRSVVRLDAGHWVQQERPDEVTAALVDFLERDRDRDGARPMPVGAAL"
misc_feature complement(405577..406488)
/locus_tag="Caci_0362"
/note="Predicted hydrolases or acyltransferases
(alpha/beta hydrolase superfamily) [General function
prediction only]; Region: MhpC; COG0596"
/db_xref="CDD:223669"
misc_feature complement(406240..>406428)
/locus_tag="Caci_0362"
/note="Putative lysophospholipase; Region: Hydrolase_4;
pfam12146"
/db_xref="CDD:221442"
misc_feature complement(<406108..>406248)
/locus_tag="Caci_0362"
/note="homoserine O-acetyltransferase; Provisional;
Region: metX; cl17114"
/db_xref="CDD:247710"
gene 407168..409477
/locus_tag="Caci_0363"
/db_xref="GeneID:8331690"
CDS 407168..409477
/locus_tag="Caci_0363"
/inference="protein motif:PFAM:PF02518"
/note="PFAM: ATP-binding region ATPase domain protein;
SMART: ATP-binding region ATPase domain protein;
KEGG: sgr:SGR_935 sensor-like histidine kinase"
/codon_start=1
/transl_table=11
/product="ATP-binding protein"
/protein_id="YP_003111157.1"
/db_xref="GI:256389593"
/db_xref="InterPro:IPR003594"
/db_xref="GeneID:8331690"
/translation="MTAADRVQEAPPRPGHGAPGRHSAYNAAGAERRPAGRRPTAWVV
APSVCSAVLAGAAIVLVVDGAHSAGYHISSGTMTAVWVLGGLILAVVAATLAFAGRPG
RATEIPAFGGPDPRQAPPPMAQPQPQPQPQPHQQPQHQQHRPQPAPAPLPQQAPPPPP
MSPQVVANATEAAATLAAATKAAAGPIAVSEEGVDLQVIFAQLVRRLLTLVLQQINRL
DELENEVEDPKLLKSLFGIDHQATQVRRYGENIGVLVGALPQRQWTHPVPVTVAQRSA
VSETPDYPRVQVIPRAPGRIHGHAVSDVIHILSELVENATNYSNPTTKVTVGAHRVSA
GLAIEINDHGIGMESDQFRRLNTLLRDPSGANVKDLLSQGRIGLSVVAKMAQRHGIAV
ELAPNVTGGTMALVVIPDALLAAEELPADKGHQPRRGIDHTQLPARPALAPLPDTLPP
ATTSSTASTAATAPSSAASLSPVAASMPPPLSSPATAHVPPLPTSPAAAAQESARAGQ
PTPIRATPPPLPTSPLPTSPAAADQAARTAQQGYAQPDSFQSGQGRQAWSQPAPAEPQ
WPSINPPVTGGASAPTAAAPVPGPTGSVASFQAPSADMYQGSELGAAAPAQTDRYPAQ
DFGTPAPAQPDRYSLQGPDTAVLPLTPDRYPAPGTGTSVPPWSRLGDRSAAGEQASEP
ASEKAPGLLPDGRPQLRRRTPQGHISARLLQAEPQENPHGGGALSPTMMSDFWQGLSS
GIAPAGPPAAGADPSQHDRTTANRQEWNQ"
misc_feature 408083..408373
/locus_tag="Caci_0363"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:238030"
misc_feature <408086..408391
/locus_tag="Caci_0363"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:223715"
misc_feature order(408095..408097,408107..408109,408116..408118,
408185..408187,408191..408193,408197..408199,
408203..408208,408293..408301,408347..408349,
408353..408355,408368..408373)
/locus_tag="Caci_0363"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238030"
misc_feature 408107..408109
/locus_tag="Caci_0363"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238030"
misc_feature order(408197..408199,408203..408205,408296..408298)
/locus_tag="Caci_0363"
/note="G-X-G motif; other site"
/db_xref="CDD:238030"
gene 409474..409905
/locus_tag="Caci_0364"
/db_xref="GeneID:8331691"
CDS 409474..409905
/locus_tag="Caci_0364"
/inference="protein motif:PFAM:PF03259"
/note="PFAM: Roadblock/LC7 family protein;
KEGG: sma:SAV_1632 hypothetical protein"
/codon_start=1
/transl_table=11
/product="Roadblock/LC7 family protein"
/protein_id="YP_003111158.1"
/db_xref="GI:256389594"
/db_xref="InterPro:IPR004942"
/db_xref="GeneID:8331691"
/translation="MSTQTEENLSWLINRMLQSIPAARSVLLMSTDGLVRAYTTGLNK
DEADTLAAAESGMWGIVTAIGKTVRAGGVRQVVVELDGAFLCVGAAGPGTCIGVLADR
EADPRQIGFEMQRCVTAVVRELSTAPRGAADGAVAAARARS"
misc_feature 409498..409773
/locus_tag="Caci_0364"
/note="Roadblock/LC7 domain; Region: Robl_LC7; pfam03259"
/db_xref="CDD:217460"
gene 409902..410273
/locus_tag="Caci_0365"
/db_xref="GeneID:8331692"
CDS 409902..410273
/locus_tag="Caci_0365"
/inference="protein motif:PFAM:PF05331"
/note="PFAM: protein of unknown function DUF742;
KEGG: sco:SCO6796 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111159.1"
/db_xref="GI:256389595"
/db_xref="InterPro:IPR007995"
/db_xref="GeneID:8331692"
/translation="MSRGDPDAFVDSAAGRLIRPYAVAGGRTAPNADFHLVTYVVATG
RALSDLGPDHDDILSLCDRPISVAEVSALSGLPLAVTKILLSDLLGWRAIDTRAPVPV
FERARPSTDLLEKVLDALYKL"
misc_feature 409938..410270
/locus_tag="Caci_0365"
/note="Protein of unknown function (DUF742); Region:
DUF742; pfam05331"
/db_xref="CDD:218558"
gene 410254..410889
/locus_tag="Caci_0366"
/db_xref="GeneID:8331693"
CDS 410254..410889
/locus_tag="Caci_0366"
/inference="protein motif:PFAM:PF03029"
/note="PFAM: protein of unknown function ATP binding;
KEGG: tfu:Tfu_2447 ATP/GTP-binding protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111160.1"
/db_xref="GI:256389596"
/db_xref="InterPro:IPR004130"
/db_xref="GeneID:8331693"
/translation="MPSTSSDRASENLPGGLKLLIAGGFGVGKTTLVGAVSEIAPLKT
EATITEASVGVDDIALTGGKTTTTVALDFGRISIANEYVLFLFGMPGQERFWFMWDQL
CIGALGVIVLVDTRRIEDSFEAVDYFERTGIPFLVAVNEFEGARFAYTSVEVREALQL
RAEVPVVMCDARSRTSAVNVLIALVKHLQSTDFRPVRPAAPELAAHEGSYI"
misc_feature 410311..410811
/locus_tag="Caci_0366"
/note="Rat sarcoma (Ras)-like superfamily of small
guanosine triphosphatases (GTPases); Region:
Ras_like_GTPase; cd00882"
/db_xref="CDD:206648"
misc_feature 410314..410817
/locus_tag="Caci_0366"
/note="Conserved hypothetical ATP binding protein; Region:
ATP_bind_1; pfam03029"
/db_xref="CDD:217326"
misc_feature 410320..410343
/locus_tag="Caci_0366"
/note="G1 box; other site"
/db_xref="CDD:206648"
misc_feature order(410326..410346,410524..410526,410671..410676,
410680..410682,410761..410769)
/locus_tag="Caci_0366"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206648"
misc_feature 410455..410457
/locus_tag="Caci_0366"
/note="G2 box; other site"
/db_xref="CDD:206648"
misc_feature 410467..410475
/locus_tag="Caci_0366"
/note="Switch I region; other site"
/db_xref="CDD:206648"
misc_feature 410515..410526
/locus_tag="Caci_0366"
/note="G3 box; other site"
/db_xref="CDD:206648"
misc_feature order(410521..410526,410572..410577)
/locus_tag="Caci_0366"
/note="Switch II region; other site"
/db_xref="CDD:206648"
misc_feature 410671..410682
/locus_tag="Caci_0366"
/note="G4 box; other site"
/db_xref="CDD:206648"
misc_feature 410761..410769
/locus_tag="Caci_0366"
/note="G5 box; other site"
/db_xref="CDD:206648"
gene 410886..411854
/locus_tag="Caci_0367"
/db_xref="GeneID:8331694"
CDS 410886..411854
/locus_tag="Caci_0367"
/inference="protein motif:PFAM:PF01590"
/note="PFAM: GAF domain protein;
SMART: GAF domain protein;
KEGG: sma:SAV_1629 hypothetical protein"
/codon_start=1
/transl_table=11
/product="GAF sensor protein"
/protein_id="YP_003111161.1"
/db_xref="GI:256389597"
/db_xref="InterPro:IPR003018"
/db_xref="GeneID:8331694"
/translation="MTDRDDFQTPALRLGQPAPSDAAARAARQRELSLSATADSVFDE
VARRAAEATGATAAMVNMVGENGQYLVGLYGKEPGSGEAAFLGDPGRYAAMDQGFCVH
VVGRKAALTLDDVFDFSRFRGNPIVDELGVRSYIGVPLIDDGGTVIGTVCAIDPAPRS
ESDGNSWGNQGLQVLKAARDEVLAEISGRQKIAAILENAGGTAMIAARPGLEVLYANT
LHDQLFGAVQVLGTPALEAFPHLAPVGILAVIETLDRGGEPTTTAPIPLSEPATGSVI
FAAVPVRVPGHASAVLTLGLRDSDAATVLNRAAQIAADIGALSDTR"
misc_feature <411168..411362
/locus_tag="Caci_0367"
/note="GAF domain; Region: GAF; pfam01590"
/db_xref="CDD:216590"
misc_feature <411183..411368
/locus_tag="Caci_0367"
/note="FOG: GAF domain [Signal transduction mechanisms];
Region: FhlA; COG2203"
/db_xref="CDD:225113"
gene complement(411918..412919)
/locus_tag="Caci_0368"
/db_xref="GeneID:8331695"
CDS complement(411918..412919)
/locus_tag="Caci_0368"
/EC_number="2.3.1.41"
/inference="protein motif:TFAM:TIGR00747"
/note="KEGG: sma:SAV_609 3-oxoacyl-(acyl carrier protein)
synthase III;
TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III;
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)]
synthase III"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP synthase"
/protein_id="YP_003111162.1"
/db_xref="GI:256389598"
/db_xref="InterPro:IPR004655"
/db_xref="InterPro:IPR013747"
/db_xref="InterPro:IPR013751"
/db_xref="GeneID:8331695"
/translation="MTKAAVISGIGSSVPASVVTNDMLAERLDTTDDWIRRLTGIQTR
HWIEPGQATSDLAVEAGSRAIESAGGEPPQAVVLATITPDRPCPATAPEVASRLGLEG
VAAFDVAAVCSGFVYGLATGTGLIAAGIAERVLVIGADTISTILDPTDRSTGVIFGDG
AGAVMLRAGEADEPGALQALDLGSDGTGTDLITVPAGGSRQRSTKSVPPTTDTYLKMA
GREVFRESVRRMVESCEAVLERTGWDAADVDRLVPHQANLRIMNSVADRLGMPRDRAV
VDLDRVGNTSAASIPLALARAAAEGTVESGHRLLLTAFGGGLTWGSATLTWPDIKPV"
sig_peptide complement(412863..412919)
/locus_tag="Caci_0368"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.914) with cleavage site probability 0.688 at
residue 19"
misc_feature complement(411936..412916)
/locus_tag="Caci_0368"
/note="3-oxoacyl-(acyl carrier protein) synthase III;
Reviewed; Region: PRK09352"
/db_xref="CDD:236475"
misc_feature complement(411945..412907)
/locus_tag="Caci_0368"
/note="Ketoacyl-acyl carrier protein synthase III (KASIII)
initiates the elongation in type II fatty acid synthase
systems. It is found in bacteria and plants. Elongation of
fatty acids in the type II systems occurs by Claisen
condensation of malonyl-acyl...; Region: KAS_III; cd00830"
/db_xref="CDD:238426"
misc_feature complement(order(411969..411971,412338..412343,
412359..412376,412488..412490,412545..412550,
412557..412562,412569..412571,412593..412613,
412635..412637,412644..412646,412671..412673,
412677..412679))
/locus_tag="Caci_0368"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238426"
misc_feature complement(order(412068..412070,412158..412160,
412584..412586))
/locus_tag="Caci_0368"
/note="active site"
/db_xref="CDD:238426"
misc_feature complement(412149..412151)
/locus_tag="Caci_0368"
/note="CoA binding pocket [chemical binding]; other site"
/db_xref="CDD:238426"
gene complement(412969..413247)
/locus_tag="Caci_0369"
/db_xref="GeneID:8331696"
CDS complement(412969..413247)
/locus_tag="Caci_0369"
/inference="protein motif:PFAM:PF00550"
/note="PFAM: phosphopantetheine-binding;
KEGG: sco:SCO0549 acyl carrier protein"
/codon_start=1
/transl_table=11
/product="phosphopantetheine-binding protein"
/protein_id="YP_003111163.1"
/db_xref="GI:256389599"
/db_xref="InterPro:IPR006163"
/db_xref="GeneID:8331696"
/translation="MESYQHVLDTLRVIIEGSVDEVAAGDITADSDLAGELGVDSLAM
FEIADKAQERWNIKISDDDISRFTTVESLATFIQAAVGAQGLPAMTEA"
misc_feature complement(413011..>413187)
/locus_tag="Caci_0369"
/note="Acyl carrier protein [Lipid metabolism / Secondary
metabolites biosynthesis, transport, and catabolism];
Region: AcpP; COG0236"
/db_xref="CDD:223314"
gene complement(413303..414853)
/locus_tag="Caci_0370"
/db_xref="GeneID:8331697"
CDS complement(413303..414853)
/locus_tag="Caci_0370"
/inference="protein motif:PFAM:PF00441"
/note="PFAM: acyl-CoA dehydrogenase domain protein; acyl-
CoA dehydrogenase type 2 domain;
KEGG: npu:Npun_R2083 AMP-dependent synthetase and ligase"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase domain-containing
protein"
/protein_id="YP_003111164.1"
/db_xref="GI:256389600"
/db_xref="InterPro:IPR006090"
/db_xref="InterPro:IPR006091"
/db_xref="InterPro:IPR006092"
/db_xref="InterPro:IPR013107"
/db_xref="GeneID:8331697"
/translation="MTADGMIAFLRQYADDRLDSWLMDERRSLPLSLISHLGSEGLFG
LRVDRRYGGRELSHTDTFRVIRQAAAIDPNLAVLLAVHNSLGIPPVRDYADEETKQRV
LPTLATGRGLVTVASSEPGMGSNVVRGMATTAIRQADRSFIVNGKKSWISLGAASSHI
TVLARLQEPNGRRRGITAFLLPTSTPGFRPRSEAMTIGLRAVPQDHITLDNMRLPPSA
VLGAEGGGAALAQNSFRMGRAFLAASGTGAMQRCIQLAERFAGRRGISTGRLLDNGVT
QRILADCAAATRTVEALVFSLAERLDRGGPVPDEFFFACKVIGCELAGQVVDQCVQLM
GARGFVDTDIVGKYFRDFRVLRIFEGATEAMSVFVGTRIVRDLESFHTTMVKTFGATK
LESDLMAGLHDLVERAGSGLTPQQGHVLARAVGDVACWGVTAAAIAETAENSHGDLDV
YAAYWAARQLEQRLASARNELRPAFALSANVLARHIAEYADSIGDTQQSYGGERRAVD
AFLHRDPA"
misc_feature complement(413723..414826)
/locus_tag="Caci_0370"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:224871"
misc_feature complement(414524..414823)
/locus_tag="Caci_0370"
/note="Acyl-CoA dehydrogenase, N-terminal domain; Region:
Acyl-CoA_dh_N; pfam02771"
/db_xref="CDD:217220"
misc_feature complement(413744..414601)
/locus_tag="Caci_0370"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cd00567"
/db_xref="CDD:173838"
misc_feature complement(order(413765..413767,413771..413773,
413777..413785,414398..414400,414404..414406,
414503..414505,414509..414511,414599..414601))
/locus_tag="Caci_0370"
/note="active site"
/db_xref="CDD:173838"
gene complement(414952..415155)
/locus_tag="Caci_0371"
/db_xref="GeneID:8331698"
CDS complement(414952..415155)
/locus_tag="Caci_0371"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111165.1"
/db_xref="GI:256389601"
/db_xref="GeneID:8331698"
/translation="MPCKTASAILLTPTMNAPILFDVNETAAHQPSAERHGANGGHDH
TGVRILKPVRSCHACEKSSKLVG"
gene complement(415643..416230)
/locus_tag="Caci_0372"
/db_xref="GeneID:8331699"
CDS complement(415643..416230)
/locus_tag="Caci_0372"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: fal:FRAAL6075 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111166.1"
/db_xref="GI:256389602"
/db_xref="GeneID:8331699"
/translation="MSAPPVLRDVYRTLMAARGDAAASLTFDDGPGPIARLDVFVYRP
AEPAGLTTFATVGMATAPMPTADGAEGSRAELLLSRSGELAPEDEQQIAMQLANLAVY
PWKTGRAVGWAQIVGFEQDFPTFPGCPAVFLAGPLLKDTPNWIDTCEGAVQVITVVPI
TEAERASAASMPPKTFAGNLIEARDVFTAPPVVGA"
misc_feature complement(415727..416143)
/locus_tag="Caci_0372"
/note="Suppressor of fused protein (SUFU); Region: SUFU;
pfam05076"
/db_xref="CDD:218418"
gene 416438..418825
/locus_tag="Caci_0373"
/db_xref="GeneID:8331700"
CDS 416438..418825
/locus_tag="Caci_0373"
/inference="protein motif:PFAM:PF00754"
/note="PFAM: coagulation factor 5/8 type domain protein;
Fibronectin type III domain protein;
SMART: Fibronectin type III domain protein; coagulation
factor 5/8 type domain protein;
KEGG: sco:SCO7015 secreted glycosyl hydrolase"
/codon_start=1
/transl_table=11
/product="coagulation factor 5/8 type domain-containing
protein"
/protein_id="YP_003111167.1"
/db_xref="GI:256389603"
/db_xref="InterPro:IPR000421"
/db_xref="InterPro:IPR003961"
/db_xref="InterPro:IPR006311"
/db_xref="GeneID:8331700"
/translation="MTVTRRRFLTTAAAGSAAALLAGPDLLAAPAARAASPAGDVVGK
ITVGYQGWFACAGDGAPIGGWWHWAQNWAQTPSPSNNVIKAWPDMREYTHAYQTAYSN
LGNGQPATLFSSYDQQTVDTHFLWMQQNGCDTAALQRFNPNSSEGPTRDAMATKVRSS
AETHSRKFYIMYDVTGWTAMQAEIKADWTSKMSALTASSAYAHQNGKPVVGIWGFGFN
DANHPWDAATCLDVITWFKSQGCYVMGGVPREWRTGTGGSRAGYLGVYHAFDMLSPWM
VGAIGTAADSDNAYTNLTVPDLADCTANNVDYQPCVLPGDLSGRQRVHGDFMWRQFYN
MARAGTQSVYISMFDEYGEGNQIAKTAENQSMSPNGAGLLALDEDGTACSSDYYLRLT
ADGGRMLKGQIPLTATRPTQPVAGSGGGSGNLALGKPASASGTSQNFGPGNAVDGDPN
TYWESVNNAFPQWFQVDLGSVAAVGSVVMKLPASWGARTQTLALAGSSDGSTFSTLAA
SAGRTFDPATGNTVTINVGTASVRYLRATFTANTGWPAGQLSEFQVFAPTSGGGGDTT
PPTAPTNLAVTGHTSSSVSLSWTASTDNIGVTGYQVRVNGTTALTVTKTTATVTGLSP
STAYSFAVVATDALGNVSLPSATVSATTDPATNANLALGKPTSESGHTQSYASSNTVD
GDANTYWESVDNAFPQWLMVDLGAVTSVSRVVLKLPPATAWAARTQTVAVTGGADASA
ASTLSASAGRLFDPATGNSVTITFPATSVRYVRLTFTANTGWPAGQISEFQVYAS"
sig_peptide 416438..416524
/locus_tag="Caci_0373"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.471 at
residue 29"
misc_feature 416558..417643
/locus_tag="Caci_0373"
/note="Uncharacterized glycoside hydrolase family 99-like
domain; Region: GH99_GH71_like_2; cd11576"
/db_xref="CDD:211417"
misc_feature order(416855..416857,416954..416956,417074..417076,
417260..417262,417383..417385,417485..417487,
417491..417496)
/locus_tag="Caci_0373"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:211417"
misc_feature order(417485..417487,417494..417496)
/locus_tag="Caci_0373"
/note="putative catalytic site [active]"
/db_xref="CDD:211417"
misc_feature 417722..418093
/locus_tag="Caci_0373"
/note="F5/8 type C domain; Region: F5_F8_type_C;
pfam00754"
/db_xref="CDD:216100"
misc_feature order(417797..417799,417881..417883,417896..417898)
/locus_tag="Caci_0373"
/note="sugar binding site [chemical binding]; other site"
/db_xref="CDD:238014"
misc_feature 418412..418819
/locus_tag="Caci_0373"
/note="Coagulation factor 5/8 C-terminal domain, discoidin
domain; Region: FA58C; smart00231"
/db_xref="CDD:214572"
misc_feature 418433..418807
/locus_tag="Caci_0373"
/note="F5/8 type C domain; Region: F5_F8_type_C;
pfam00754"
/db_xref="CDD:216100"
misc_feature order(418505..418507,418589..418591,418610..418612)
/locus_tag="Caci_0373"
/note="sugar binding site [chemical binding]; other site"
/db_xref="CDD:238014"
gene complement(418891..419883)
/locus_tag="Caci_0374"
/db_xref="GeneID:8331701"
CDS complement(418891..419883)
/locus_tag="Caci_0374"
/inference="protein motif:PFAM:PF00126"
/note="PFAM: regulatory protein LysR;
KEGG: fal:FRAAL3598 LysR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_003111168.1"
/db_xref="GI:256389604"
/db_xref="InterPro:IPR000847"
/db_xref="GeneID:8331701"
/translation="MDLDLAQVRAFVAAAERLHFGQAAEQLAVSQQALSKRIARLEGE
LGVQLFLRGGHAVELTDAGRRFLEPARQTLAHGDAAVAAARHVERPLRIDYWGHLFAP
MRTLAPVIERVGGAVTVETGPGRDLPGVLDALDRSATDVGFGRVHGVGGGVGSGGGGT
RDAAYTHRLVRLEPVDVVISEDHRLAGQSEVRPAELRDSVLWCPAALNRLDFFQRFAE
HFDITAESGTANLGIDRFLEQVAADPVRFALIPADLELPERTRVRSLPLVEPTPLYAW
SLVWRAADPHPGIEPLLRAFADVAGRSRWLEYQPGRDWLPAGDVSEVWHPAERK"
misc_feature complement(418990..419877)
/locus_tag="Caci_0374"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:223656"
misc_feature complement(419692..419871)
/locus_tag="Caci_0374"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:215735"
misc_feature complement(418984..>419403)
/locus_tag="Caci_0374"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cl11398"
/db_xref="CDD:245600"
gene 420005..420925
/locus_tag="Caci_0375"
/db_xref="GeneID:8331702"
CDS 420005..420925
/locus_tag="Caci_0375"
/inference="protein motif:PFAM:PF00107"
/note="PFAM: alcohol dehydrogenase zinc-binding domain
protein; alcohol dehydrogenase GroES domain protein;
KEGG: mlo:mlr3236 oxidoreductase"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase zinc-binding
domain-containing protein"
/protein_id="YP_003111169.1"
/db_xref="GI:256389605"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:8331702"
/translation="MKAMTATGRTEPSVALTAVDQPQPRPDEALVKVEAYSVNRGETF
QLEAPRPGWRPGKDVAGLVVQAAADGSGPAVGARVVGHPPQGGWAEYVAVPTSSLADL
PDTVPAATAAALPLAGLTALRLLRVTRAAAGSRVLMTGASGGVGHYFVELAAAAGLEI
TAVSSSPERGARLLELGAARVVPSIDAAEGPFDIVLESTGGPNLPAALAKLARRGTLI
WFGQASRQPATLDFFDFFAGPESATIRHFHYADSDSTYGQDLQTLVRLVAADRLHPEI
GLVTDWTGTADVLTLLRDRGVRGNAVLTIA"
misc_feature 420005..420919
/locus_tag="Caci_0375"
/note="Medium chain reductase/dehydrogenase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR; cl16912"
/db_xref="CDD:247637"
misc_feature 420005..420919
/locus_tag="Caci_0375"
/note="NADPH:quinone reductase and related Zn-dependent
oxidoreductases [Energy production and conversion /
General function prediction only]; Region: Qor; COG0604"
/db_xref="CDD:223677"
misc_feature order(420119..420127,420134..420136,420350..420352,
420362..420364,420422..420433,420437..420442,
420494..420499,420509..420511,420554..420556,
420596..420601,420662..420667,420734..420742)
/locus_tag="Caci_0375"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:176178"
gene 420994..421407
/locus_tag="Caci_0376"
/db_xref="GeneID:8331703"
CDS 420994..421407
/locus_tag="Caci_0376"
/inference="protein motif:PFAM:PF07858"
/note="PFAM: Limonene-12-epoxide hydrolase;
KEGG: fal:FRAAL3597 delta-5-3-ketosteroid isomerase- like
protein (fragment) (partial match)"
/codon_start=1
/transl_table=11
/product="limonene-12-epoxide hydrolase"
/protein_id="YP_003111170.1"
/db_xref="GI:256389606"
/db_xref="InterPro:IPR013100"
/db_xref="GeneID:8331703"
/translation="MTTITDPKTVVVRYVEAVRDGDTETIVASFAEHATWLYPGNLPI
SRLWEGRDAIINDFLGGMGAYLDTSAPVVIALVHAFADGDQVLAEWTSKATAANGATY
DNRCAAVFTVEDGKITSVREYADTHHVAAVLFGEA"
misc_feature 420997..421392
/locus_tag="Caci_0376"
/note="Ketosteroid isomerase-related protein [General
function prediction only]; Region: COG3631"
/db_xref="CDD:226158"
gene complement(421534..422022)
/locus_tag="Caci_0377"
/db_xref="GeneID:8331704"
CDS complement(421534..422022)
/locus_tag="Caci_0377"
/inference="protein motif:PFAM:PF00583"
/note="PFAM: GCN5-related N-acetyltransferase;
KEGG: sen:SACE_5162 acetyltransferase"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_003111171.1"
/db_xref="GI:256389607"
/db_xref="InterPro:IPR000182"
/db_xref="GeneID:8331704"
/translation="MMDGMTTTDAWTARRATVREPDAIDLLVSYYDELVSRYWGRPCE
PGEVDAAMRDEPNDDLVAFLVASVGEEPAGCVGVRMLAPEVAELSRMYIRPQFRRSGG
GRLLLGEADRAAAELGARAIRLDTRGDLVEARAMYARYGYREIPAYNDSKYANHWFEK
TL"
gene complement(422022..422486)
/locus_tag="Caci_0378"
/db_xref="GeneID:8331705"
CDS complement(422022..422486)
/locus_tag="Caci_0378"
/inference="protein motif:PFAM:PF01047"
/note="PFAM: regulatory protein MarR;
SMART: regulatory protein MarR;
KEGG: sco:SCO7709 MarR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="MarR family transcriptional regulator"
/protein_id="YP_003111172.1"
/db_xref="GI:256389608"
/db_xref="InterPro:IPR000835"
/db_xref="GeneID:8331705"
/translation="MNATPADPPPPAVEDVATHLRSAVGTLVRSTRAVDRIAPIPAAV
LDLLAARGPMTTADLASSRGVRHQTMAATVKDLADAGFLSAGPDPDDARKKILALTEA
GRHALDADRRQRTVLLAAALDQALDADELRVLARALDLLDRVSVAVNQMTAT"
misc_feature complement(422208..422363)
/locus_tag="Caci_0378"
/note="MarR family; Region: MarR_2; pfam12802"
/db_xref="CDD:221778"
gene 422561..423196
/locus_tag="Caci_0379"
/db_xref="GeneID:8331706"
CDS 422561..423196
/locus_tag="Caci_0379"
/inference="similar to AA sequence:KEGG:SCO7708"
/note="KEGG: sco:SCO7708 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111173.1"
/db_xref="GI:256389609"
/db_xref="GeneID:8331706"
/translation="MQLIKHAHACVSLVGDQGRIVIDPGTLTPDAAAAVAAAEAVLIT
HEHFDHFDEDMLAKALDARPELRVYGPASVVGRWEARRGQVTAVAAGDRHAVAGFDIA
VFGELHALIHRDVPRVTNVGYLVDEKLYHPGDAYHVPEAPVETLLLPTSGPWTKLGEA
VDYVREVAPKQAVQIHELLLAEVGQQAAKTMIGNLTEAAMAIVPVGEAITV"
misc_feature 422561..423088
/locus_tag="Caci_0379"
/note="Predicted Zn-dependent hydrolases of the
beta-lactamase fold [General function prediction only];
Region: COG2220"
/db_xref="CDD:225130"
misc_feature 422564..423088
/locus_tag="Caci_0379"
/note="Beta-lactamase superfamily domain; Region:
Lactamase_B_3; pfam13483"
/db_xref="CDD:222167"
gene complement(423278..423928)
/locus_tag="Caci_0380"
/db_xref="GeneID:8331707"
CDS complement(423278..423928)
/locus_tag="Caci_0380"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: sgr:SGR_3047 TetR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003111174.1"
/db_xref="GI:256389610"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331707"
/translation="MVQTETGTPRQRYRAQVQEEIKQHAWEQIATAGASALSLNAIAK
QMGMSGPALYRYFANRDELITALIRDAYQSMADAMRAAVADGAGLRGLARTLREWALE
DPQRYLLIYGTPVPGYQAPEDTTRLANDVMALLLDASSAEGLGALPPSPVQTHLEQHS
PWAGAHAGEGTTLHRAVILWTRLHGVLSLELAGHFAGMEFDPALLYAAEVEAVAGY"
misc_feature complement(<423710..423904)
/locus_tag="Caci_0380"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:224228"
misc_feature complement(423728..423856)
/locus_tag="Caci_0380"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 424024..425055
/locus_tag="Caci_0381"
/db_xref="GeneID:8331708"
CDS 424024..425055
/locus_tag="Caci_0381"
/inference="protein motif:PFAM:PF00107"
/note="PFAM: alcohol dehydrogenase zinc-binding domain
protein; alcohol dehydrogenase GroES domain protein;
KEGG: sma:SAV_1467 dehydrogenase"
/codon_start=1
/transl_table=11
/product="alcohol dehydrogenase zinc-binding
domain-containing protein"
/protein_id="YP_003111175.1"
/db_xref="GI:256389611"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="GeneID:8331708"
/translation="MTDQTLVQVVLPGKVEPEDLQVQHAAVPQPAVGQVVIAMEATGV
SFAEQQMRRGRYFDQPPFPFVPGYDVVGRVYAVGAGVDPGLLGRRVAVLTKVGGWASH
VLADARDAVEVPEGLTAEQAETVVVNGITAWQMLHRRARVKAGQTVLVHGVNGGVGSV
LAQLAMAAGATVIGTASARHHDALRAAGILPVDYRAGNVPEQVRALAPHGVDAVFDHV
GGRSVIDSWHLLAPGGTLVSYGSASTRDDSGWKQWPVLKILARTTLWTLLPNGRSASF
FNIWAGKKLNQDRFRARLRADLTEVFAALGRGDIVTTIAARLPLAQAGEAMRLAESGT
VAGKIILTP"
misc_feature 424048..425046
/locus_tag="Caci_0381"
/note="Medium chain dehydrogenases/reductase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR8; cd08273"
/db_xref="CDD:176234"
misc_feature 424141..425052
/locus_tag="Caci_0381"
/note="NADPH:quinone reductase and related Zn-dependent
oxidoreductases [Energy production and conversion /
General function prediction only]; Region: Qor; COG0604"
/db_xref="CDD:223677"
misc_feature order(424156..424164,424171..424173,424402..424404,
424414..424416,424477..424488,424492..424497,
424549..424554,424561..424563,424603..424605,
424672..424677,424681..424683,424738..424743,
424855..424863)
/locus_tag="Caci_0381"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176234"
gene 425100..425504
/locus_tag="Caci_0382"
/db_xref="GeneID:8331709"
CDS 425100..425504
/locus_tag="Caci_0382"
/inference="protein motif:PFAM:PF07366"
/note="PFAM: protein of unknown function DUF1486;
KEGG: ana:alr3729 unknown protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111176.1"
/db_xref="GI:256389612"
/db_xref="InterPro:IPR009959"
/db_xref="GeneID:8331709"
/translation="MTTPEIVTAWAAAWTGTNPNALGTLFAADGTYVDHAIGATMTGR
EQISGWKARTDAMIENVHVTITKAYRAGDHVTIEAVYGGHIKGAPTPFAVPMATLLRT
RGEEITSDQDYYSLSSVLAQSGLPADWTPSDS"
misc_feature 425118..425426
/locus_tag="Caci_0382"
/note="SnoaL-like domain; Region: SnoaL_2; pfam12680"
/db_xref="CDD:221707"
gene complement(425684..426577)
/locus_tag="Caci_0383"
/db_xref="GeneID:8331710"
CDS complement(425684..426577)
/locus_tag="Caci_0383"
/inference="protein motif:PFAM:PF03466"
/note="PFAM: LysR substrate-binding; regulatory protein
LysR;
KEGG: sma:SAV_7306 LysR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="YP_003111177.1"
/db_xref="GI:256389613"
/db_xref="InterPro:IPR000847"
/db_xref="InterPro:IPR005119"
/db_xref="GeneID:8331710"
/translation="MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELG
ADLFLRARGNITLTDAGEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLC
TGLLPDVLRTYHRRYPGIQLLVQESGSHDLVRDLARGALDLALVVLPLPSPSPALTTE
ELLREDLVVVSAPNLPPPGDGRQVRIADLEHEQLIMFRHGYDLRDLTVAACRAQGFEP
VFAIEGGEMDAVLGFARAGLGVAIVPSMVAQNVDPSLRVTPIAPPALHRTIALAHRTD
VALPRAAQEFRRTLLERTTAE"
misc_feature complement(425699..426577)
/locus_tag="Caci_0383"
/note="DNA-binding transcriptional regulator CynR;
Provisional; Region: PRK11242"
/db_xref="CDD:183051"
misc_feature complement(426392..426571)
/locus_tag="Caci_0383"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:215735"
misc_feature complement(425708..426304)
/locus_tag="Caci_0383"
/note="The substrate binding domain of LysR-type
transcriptional regulators (LTTRs), a member of the type 2
periplasmic binding fold protein superfamily; Region:
PBP2_LTTR_substrate; cd05466"
/db_xref="CDD:176102"
misc_feature complement(order(425870..425875,425879..425884,
425900..425917,426200..426220,426224..426226,
426236..426238,426245..426250,426254..426259))
/locus_tag="Caci_0383"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 426686..427390
/locus_tag="Caci_0384"
/db_xref="GeneID:8331711"
CDS 426686..427390
/locus_tag="Caci_0384"
/inference="protein motif:TFAM:TIGR02046"
/note="TIGRFAM: succinate dehydrogenase (or fumarate
reductase) cytochrome b subunit, b558 family;
KEGG: sco:SCO0924 cytochrome b subunit"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase (or fumarate reductase)
cytochrome b subunit, b558 family"
/protein_id="YP_003111178.1"
/db_xref="GI:256389614"
/db_xref="InterPro:IPR011138"
/db_xref="GeneID:8331711"
/translation="MVTATWTDRRPPSLRTAWDSSVGKKTVMAVSGLVMVLYLLAHAF
GNLKVFFGPGQFDSYAHWLRTMGEPVMHYSWTLWVIRVVMVLAVVAHTVSAYQLSRRD
IRARPVRYEHRKAGSSYATRTMRWGGIILGLFIIWHLLDLTTGTVHSGFQPGHPYANV
VSTFNHWYGDVIYIVAVCALGLHIQHGFWSAAQTLGVGSAKRDRLIKTTGNVVAVLLT
LAFVAVPVGVMSGVVK"
misc_feature 426755..427318
/locus_tag="Caci_0384"
/note="Succinate:quinone oxidoreductase (SQR)-like Type B
subfamily 2, transmembrane subunit; composed of proteins
with similarity to the SQRs of Geobacter metallireducens
and Corynebacterium glutamicum. SQR catalyzes the
oxidation of succinate to fumarate...; Region:
SQR_TypeB_2_TM; cd03498"
/db_xref="CDD:239578"
misc_feature order(426758..426760,426977..426979,427016..427018,
427022..427024,427046..427048,427253..427255,
427265..427270,427292..427294)
/locus_tag="Caci_0384"
/note="putative Iron-sulfur protein interface [polypeptide
binding]; other site"
/db_xref="CDD:239578"
misc_feature order(426767..426772,426779..426781,426788..426790,
426956..426961,426968..426970,427046..427048,
427067..427069,427232..427234,427244..427246,
427256..427258,427265..427267)
/locus_tag="Caci_0384"
/note="proximal heme binding site [chemical binding];
other site"
/db_xref="CDD:239578"
misc_feature order(426797..426799,426809..426811,427097..427099,
427109..427111,427163..427165,427172..427174,
427202..427204)
/locus_tag="Caci_0384"
/note="distal heme binding site [chemical binding]; other
site"
/db_xref="CDD:239578"
misc_feature order(426971..426976,427001..427003,427013..427015,
427079..427084,427091..427096,427103..427105,
427115..427117,427184..427189,427199..427201)
/locus_tag="Caci_0384"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:239578"
gene 427387..429336
/gene="sdhA"
/locus_tag="Caci_0385"
/db_xref="GeneID:8331712"
CDS 427387..429336
/gene="sdhA"
/locus_tag="Caci_0385"
/EC_number="1.3.99.1"
/inference="protein motif:TFAM:TIGR01811"
/note="part of four member succinate dehydrogenase enzyme
complex that forms a trimeric complex (trimer of
tetramers); SdhA/B are the catalytic subcomplex and can
exhibit succinate dehydrogenase activity in the absence of
SdhC/D which are the membrane components and form
cytochrome b556; SdhC binds ubiquinone; oxidizes succinate
to fumarate while reducing ubiquinone to ubiquinol"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase flavoprotein subunit"
/protein_id="YP_003111179.1"
/db_xref="GI:256389615"
/db_xref="InterPro:IPR003953"
/db_xref="InterPro:IPR004112"
/db_xref="InterPro:IPR011280"
/db_xref="GeneID:8331712"
/translation="MTDYTDYTVGDPIADAKAPAGPISERWDTRRFEAKLVNPANRRK
RTVIVIGTGLAGGSAGATLAEAGYHVVQFCFQDSPRRAHSIAAQGGINAAKNYRNDGD
SVHRLFYDTVKGGDFRSRESNVHRLAQISVEIIDQCVAQGVPFAREYGGLLDTRSFGG
VQVSRTFYARGQTGQQLLLGAYQAMMRQVAAGNIELHARTEMLDLIVVDGRARGIVAR
DLLTGEISTYFGDAVVLASGGYGNVYYLSTNAMNSNATAIWRAHRKGAYFGNPCYTQI
HPTCIPRTGDHQSKLTLMSESLRNDGRIWVPKAKGDSRSPDAIPEDERDYYLERQYPS
FGNLVPRDIASRAAKNVCDEGRGVGPGGQGVYLDFADAIKRLGRKAVEEKYGNLFEMY
QRITDEDPYRVPMRIYPAVHYTMGGLWVDYDLQTTVPGLFAVGEANFSDHGANRLGAS
ALMQGLADGYFVLPATISDYLARHAGDVPVTADHPEAVAAVRETQERLDAILAVDGDR
TPDSFHRELGELMWELCGMARDEAGLRKALDQIPAIREEFWRRIKVPGTGEEFNQSLE
KANRLVDYFELAELMCLDALHRGESCGGHFRTESQTPDGEAARKDEEFSYVAAWEYTG
LGQAPVLHREELDFEYVHPAQRSYA"
misc_feature 427414..429330
/gene="sdhA"
/locus_tag="Caci_0385"
/note="succinate dehydrogenase flavoprotein subunit;
Reviewed; Region: sdhA; PRK07573"
/db_xref="CDD:236054"
misc_feature 427645..428754
/gene="sdhA"
/locus_tag="Caci_0385"
/note="L-aspartate oxidase; Provisional; Region: PRK06175"
/db_xref="CDD:180442"
misc_feature 428926..429330
/gene="sdhA"
/locus_tag="Caci_0385"
/note="Fumarate reductase flavoprotein C-term; Region:
Succ_DH_flav_C; pfam02910"
/db_xref="CDD:217281"
gene 429333..430082
/locus_tag="Caci_0386"
/db_xref="GeneID:8331713"
CDS 429333..430082
/locus_tag="Caci_0386"
/inference="protein motif:PFAM:PF00037"
/note="PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain
protein; ferredoxin;
KEGG: sco:SCO0922 succinate dehydrogenase/fumarate
reductase iron-sulfur subunit"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase/fumarate reductase
iron-sulfur subunit"
/protein_id="YP_003111180.1"
/db_xref="GI:256389616"
/db_xref="InterPro:IPR001041"
/db_xref="InterPro:IPR001450"
/db_xref="InterPro:IPR006058"
/db_xref="InterPro:IPR017900"
/db_xref="GeneID:8331713"
/translation="MKLTLRVWRQENASRPGRMQPYEIDGVSRDMSFLEMLDVLNEKL
ILDGEDPVAFDHDCREGICGACSLMIDGEAHGPEKKTTTCQLHMRSFRDGATIDVEPW
RAAAFPVVKDLVVDRSALDRVIQSGGYITAPTGAAPEAHATPIPKPAADLAFENAECI
GCGACVAACPNGSASLFTAAKINHLNTLPQGAPERETRVLTMLQQTDAEGFGGCTLTG
ECATACPKGIPLASIAAMNKEWLRAQRKASR"
misc_feature 429333..430079
/locus_tag="Caci_0386"
/note="succinate dehydrogenase/fumarate reductase
iron-sulfur subunit; Validated; Region: PRK07570"
/db_xref="CDD:181038"
misc_feature 429342..429698
/locus_tag="Caci_0386"
/note="2Fe-2S iron-sulfur cluster binding domain; Region:
Fer2_3; pfam13085"
/db_xref="CDD:221911"
misc_feature <429804..429848
/locus_tag="Caci_0386"
/note="4Fe-4S binding domain; Region: Fer4; pfam00037"
/db_xref="CDD:215671"
gene 430499..431446
/locus_tag="Caci_0387"
/db_xref="GeneID:8331714"
CDS 430499..431446
/locus_tag="Caci_0387"
/inference="similar to AA sequence:KEGG:SAV_5252"
/note="KEGG: sma:SAV_5252 sugar hydrolase"
/codon_start=1
/transl_table=11
/product="sugar hydrolase"
/protein_id="YP_003111181.1"
/db_xref="GI:256389617"
/db_xref="GeneID:8331714"
/translation="MPRTVRKSLIAGAAFLLPAAAVGVAAGASTAAAATHAASFPAHY
SAPYLQISSSDAKDMAADMAASGDKFYTLAFLTPKSGCTPEWEDGGDSVGAFSSQITA
LQNAGGNVIISFGGAEGGELAQTCTSVSSLEAAYAKVVSTYHVTRLDFDIEGSVLDNK
TANSRRDQALAALQKANPAVQVDFTLPVDPTGLESNATALLSDAKSKGVAVNLVNIMT
MDFGDGQNALKDAESGANATVPQLEKVFGVSSTKAWNMLGLTPIAGKNDDNENFTQAN
ASTLESFAASKGVQELSFWEVDGYDKGVGYAYSKIFNKI"
sig_peptide 430499..430612
/locus_tag="Caci_0387"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.464 at
residue 38"
misc_feature 430634..431437
/locus_tag="Caci_0387"
/note="PF-ChiA is an uncharacterized chitinase found in
the hyperthermophilic archaeon Pyrococcus furiosus with a
glycosyl hydrolase family 18 (GH18) catalytic domain as
well as a cellulose-binding domain. Members of this
domain family are found not only in...; Region:
GH18_PF-ChiA-like; cd06543"
/db_xref="CDD:119360"
misc_feature order(430640..430642,430721..430723,430835..430837,
430943..430945,430949..430951,430955..430957,
431153..431158,431282..431284,431381..431383)
/locus_tag="Caci_0387"
/note="active site"
/db_xref="CDD:119360"
gene 431687..431824
/locus_tag="Caci_0388"
/pseudo
/db_xref="GeneID:8331715"
gene 431849..435232
/locus_tag="Caci_0389"
/db_xref="GeneID:8331716"
CDS 431849..435232
/locus_tag="Caci_0389"
/inference="similar to AA sequence:KEGG:Strop_2883"
/note="KEGG: stp:Strop_2883 WGR domain-containing protein"
/codon_start=1
/transl_table=11
/product="WGR domain-containing protein"
/protein_id="YP_003111182.1"
/db_xref="GI:256389618"
/db_xref="GeneID:8331716"
/translation="MSGATNAPTAVSEDTCQIPGAMRRLVIPRRGDVPSEPVAVDPKA
AAYYAAWFDEQSPIVAGIVDHGHSEADLVEEYRASKGDLVIATPLAAAVAAAMTISQS
TPAYENPAGIVDAWIATRGLAFAAAAAVELFGVKTSGRTSKGEQASAWLCRKDGAYED
IPHGIAVRVRQHLASAGEQDYAEVADVLARYRLSLASPTTSGQVLSRMLTSFLTPENV
DWVESDFAFVSRAHYSAWLALASITTEEQVAALPAQKISAWGIARELSALWTALDNVG
VHLLPVLTGWLAPESDPESVQRLLSIVAGIASADAFRYLVDNIDKKYFTVATQNAATT
FPRRALQILGDAALRDTPRGLAAANVLRLHIVAHDELVQDELANLTPAVRDHVEKIRA
ANVPVPDAETDSLPTLFVSPPWLTAVKPARPVVITGLEAPTETVLAWRDGEKEQWASA
ELITNPQWKLESWKDIADRISTGGSAGWYANGHFAVEAPEDLVRSVLTSWEPDSWQSD
TWIPTLVMRFGADALPPILSLARSVPASGAVFLAPFEAPEVALLAADWLSRLKTARPF
ALAWLTRHPGFAARTLIPAALGKAGKARSAAELTIRTLAARGFTAEITEAAAGYGDAV
AQAVAAIVADDGTLTLPKTMPAVPDWAETRLLPQILLKGRQTALPEQSVKHLLLMLAV
SKGTEPYAGIQMAKGICDPASLATFSWALFENWRGVDYPAKESWAFDALRWFGDDETV
RRLSPMIRLWPGENGHQRAVAGLDVLADIGGTVALMHLYGISQKVKFKGLKEQATQRV
TEIADDLGLTAEQLGDRLVPDLGLASSGTLSLDYGPRSFTVGFDEQLKPYVADQSGKR
LKALPKPGAKDDQELAPAAHQQFSALKKDVRTLAASQIARFELAMVTQRRWTSQEFGE
YFVGHPLLRHLVRRLVWVTFVDEKVGSAFRVAEDLSLADIADDEFTLADDAVIGVAHP
LHIGGDVAAWSDVFADYEILQPFAQLGRTVFAFTDAEKASTRLTRFGGIETPVGKVLG
LERRGWRRGAPQDAGIQGWISRALLGGGSVTATLDPGITVDYVAEWGETQRLQEVFIS
RHADGESYWNASAKFRELGSLDEITASELLRDLTEATTQ"
misc_feature 434408..434959
/locus_tag="Caci_0389"
/note="Domain of unknown function (DUF4132); Region:
DUF4132; pfam13569"
/db_xref="CDD:222230"
gene complement(435538..436866)
/locus_tag="Caci_0390"
/db_xref="GeneID:8331717"
CDS complement(435538..436866)
/locus_tag="Caci_0390"
/inference="protein motif:COG:COG2247"
/note="KEGG: ace:Acel_1679 protease-like"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111183.1"
/db_xref="GI:256389619"
/db_xref="GeneID:8331717"
/translation="MATTAHAGTAPHPAVAMAAVNVPAPPSGVSRISGGDRYLTGVQV
SQSQWADAGGDATGRAPAQAVVLARGDTFPDALSGVPLAAKVHGPLLLTTPAALSAGT
AAEIRRVLGPGAGQPVYILGGTGAVSPSVEAQLVRDGYAVTRYQGSNRYQTALDVARR
GLGDPARIVVATGDGYADALAAGPFAAGPDAVGGVPAAVVLSDGRSLDPATAAYVSGK
LAAAAPGDCNAVTTVGGQAGTAVQAVTPAGSCTNPLAGADRYATAVAVAQQFPAGTSV
GVATGGGFADALTGGAAMAALGRPLVLTDPAVLGDNPRLWLVGAHQGGVGATAVFGGP
SAVGGEVFTQLQDIANGGAGLPTNALCGAPANPYGFNYCGVGSEVTVKAVPAAICSYF
SCIGTDSAHTSFWRGLGYLEVCDDGDISLSGGRSGACSSHGGENHPVWKR"
misc_feature complement(436465..436776)
/locus_tag="Caci_0390"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
misc_feature complement(<436339..436440)
/locus_tag="Caci_0390"
/note="Putative cell wall binding repeat 2; Region:
CW_binding_2; pfam04122"
/db_xref="CDD:217910"
gene complement(437082..437510)
/locus_tag="Caci_0391"
/db_xref="GeneID:8331718"
CDS complement(437082..437510)
/locus_tag="Caci_0391"
/inference="protein motif:PFAM:PF04205"
/note="PFAM: FMN-binding domain protein;
KEGG: ace:Acel_0050 FMN-binding domain-containing protein"
/codon_start=1
/transl_table=11
/product="FMN-binding domain-containing protein"
/protein_id="YP_003111184.1"
/db_xref="GI:256389620"
/db_xref="InterPro:IPR007329"
/db_xref="GeneID:8331718"
/translation="MRIPLIKTLLSLAGTVGTMGGLLAMKTSAHGLAPQPLQAAKVVH
DRTAGATMTVTGPAIPVTHGIVQVRITLTDGHITDVSATSLPHDNDDSWTRSVTAAMV
LDREVIAKQSAHIDGVSGATYTSKAYKASLQAAIDAGYRH"
sig_peptide complement(437421..437510)
/locus_tag="Caci_0391"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.997) with cleavage site probability 0.558 at
residue 30"
misc_feature complement(437097..437324)
/locus_tag="Caci_0391"
/note="FMN-binding domain; Region: FMN_bind; pfam04205"
/db_xref="CDD:217964"
gene complement(437531..438940)
/locus_tag="Caci_0392"
/db_xref="GeneID:8331719"
CDS complement(437531..438940)
/locus_tag="Caci_0392"
/inference="protein motif:PFAM:PF00175"
/note="PFAM: oxidoreductase FAD/NAD(P)-binding domain
protein; FAD-binding 8 domain protein; ferric reductase
domain protein transmembrane component domain;
KEGG: fal:FRAAL0548 oxidoreductase"
/codon_start=1
/transl_table=11
/product="oxidoreductase FAD/NAD(P)-binding
domain-containing protein"
/protein_id="YP_003111185.1"
/db_xref="GI:256389621"
/db_xref="InterPro:IPR001433"
/db_xref="InterPro:IPR001834"
/db_xref="InterPro:IPR013112"
/db_xref="InterPro:IPR013130"
/db_xref="GeneID:8331719"
/translation="MVQGWSAGFEVPYDPDWVVPRRDWRHSLPLLPRRPLSAVLLAVL
AAGIAGLLALWWQETPADRMQSLPDYLVMLAQITGLVGAYLLLVEIALMARLPWLEHR
LGSWLASAHRSLGGYLVLLLCAHVGFVIAAYSVSVHDSPPAVLVSILRTYPGVLAATI
GFLVMLLAGFTSARSIRRRLGYEGWHAIHLLMYPAAAAAFWHQITLGAQFTRNPWAAD
VWVGLHAVVGAAIVCNRIVIPLLNNRHHRFRVSRVEAVGPDAMNVYITGRRVADLGAE
AGQYFRWRFMQRSLWYQAHPFSLSAAPHADTLRLTFKCVGGYTRRLKRRLRPGSRVFL
DGPYGAFTGVLRRQPGVVMIGGGIGVTPLRAIVETMHNRRRNDIIFIQRASKVGDLIL
TNELEALNAVGRIIYIPAIGSRRNDPLSADRLLDLIPDLEFREVFICGSVGMAAAAVR
NLRRAGVRRGRIHTEIFDF"
misc_feature complement(437534..438778)
/locus_tag="Caci_0392"
/note="Predicted ferric reductase [Inorganic ion transport
and metabolism]; Region: COG4097"
/db_xref="CDD:226582"
misc_feature complement(438341..438709)
/locus_tag="Caci_0392"
/note="Ferric reductase like transmembrane component;
Region: Ferric_reduct; pfam01794"
/db_xref="CDD:216705"
misc_feature complement(437537..438187)
/locus_tag="Caci_0392"
/note="Ferredoxin reductase (FNR), an FAD and NAD(P)
binding protein, was intially identified as a chloroplast
reductase activity, catalyzing the electron transfer from
reduced iron-sulfur protein ferredoxin to NADP+ as the
final step in the electron transport...; Region: FNR_like;
cl06868"
/db_xref="CDD:244539"
misc_feature complement(order(437867..437869,437984..437995,
438002..438010,438047..438058,438101..438103))
/locus_tag="Caci_0392"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99778"
misc_feature complement(order(438047..438052,438056..438058))
/locus_tag="Caci_0392"
/note="conserved FAD binding motif [chemical binding];
other site"
/db_xref="CDD:99778"
misc_feature complement(order(437954..437956,437975..437977,
437984..437986,437993..437995))
/locus_tag="Caci_0392"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99778"
misc_feature complement(order(437855..437857,437861..437872,
437882..437884))
/locus_tag="Caci_0392"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99778"
misc_feature complement(order(437618..437623,437786..437794,
437864..437869))
/locus_tag="Caci_0392"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99778"
gene complement(439201..439677)
/locus_tag="Caci_0393"
/db_xref="GeneID:8331720"
CDS complement(439201..439677)
/locus_tag="Caci_0393"
/inference="protein motif:PFAM:PF08327"
/note="PFAM: activator of Hsp90 ATPase 1 family protein;
KEGG: mxa:MXAN_2836 Aha1 domain protein"
/codon_start=1
/transl_table=11
/product="activator of Hsp90 ATPase 1 family protein"
/protein_id="YP_003111186.1"
/db_xref="GI:256389622"
/db_xref="InterPro:IPR013538"
/db_xref="GeneID:8331720"
/translation="MTTQKIQIERTYPAAPEKIWELWTTAAGIESWWAPEGFDVHVET
LELKPGGALVYTMTAVGPDQVAFMEQVGLPLSTTSTKAFTEVEPVRRLAYTSLADFIP
GVEPYDFLTEVELRPTADGGTHVVMTADAMHDEEWTGRLSAGRTNEMDNLGKVVGE"
misc_feature complement(<439294..439665)
/locus_tag="Caci_0393"
/note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
ligand-binding domain superfamily; Region: SRPBCC;
cl14643"
/db_xref="CDD:246681"
misc_feature complement(order(439297..439299,439303..439305,
439333..439335,439339..439341,439345..439350,
439396..439398,439402..439404,439423..439425,
439429..439431,439435..439437,439507..439509,
439513..439515,439519..439521,439525..439527,
439558..439560,439606..439611,439615..439623,
439648..439650,439654..439656,439660..439662))
/locus_tag="Caci_0393"
/note="hydrophobic ligand binding site; other site"
/db_xref="CDD:176854"
gene complement(439714..441039)
/locus_tag="Caci_0394"
/db_xref="GeneID:8331721"
CDS complement(439714..441039)
/locus_tag="Caci_0394"
/inference="protein motif:TFAM:TIGR02960"
/note="DNA-dependent RNA polymerase catalyzes the
transcription of DNA into RNA using the four
ribonucleoside triphosphates as substrates"
/codon_start=1
/transl_table=11
/product="RNA polymerase factor sigma-70"
/protein_id="YP_003111187.1"
/db_xref="GI:256389623"
/db_xref="InterPro:IPR000838"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="InterPro:IPR014305"
/db_xref="GeneID:8331721"
/translation="MKARSCQVCGAALSDRGRGRTSVYCSAACRQRAYRLRHTTADQS
AADVLAEIERQVRTLALRPPQSFRTDADALATTVRRLRRLAQNVTPEPVTKSAAEEQP
PQLAGEPGFAALVEPHRKWLHLHCYRMAGSYDDAEDLVQETLLKAWRDRSGFEGRAAA
RTWLYRIATNVCIDHLRRTGRRPQRYESTATSGAAEPPERMAWLQPYPDQLLDEAVAE
DEHPEAAAVSRETMELVFLATLQHLPPRQRAVLIFRDVLGRPAEETATLMDMSVAAAN
SALQRARQTLRERLPQRRTDWTRGDHSRQEQEIVRRYMAAAERSDVSMMADLLSADVL
VTMPPNPVWFAGRDALLTQIGPLFDRTSPGYFGRWRHLPVGANRLPAVAGYVQRPGTS
VFRAQMVDVLRIEAGQIMEITTFEAHLVAAFGLPLTLPMTDRPGARPTL"
misc_feature complement(439747..440766)
/locus_tag="Caci_0394"
/note="RNA polymerase factor sigma-70; Validated; Region:
PRK08241"
/db_xref="CDD:236196"
misc_feature complement(440494..440700)
/locus_tag="Caci_0394"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:218138"
misc_feature complement(440179..440322)
/locus_tag="Caci_0394"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(440191..440193,440197..440202,
440206..440214,440218..440223,440227..440229,
440257..440262,440278..440280,440308..440310))
/locus_tag="Caci_0394"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
misc_feature complement(439807..440112)
/locus_tag="Caci_0394"
/note="SnoaL-like domain; Region: SnoaL_2; pfam12680"
/db_xref="CDD:221707"
gene complement(441225..441893)
/locus_tag="Caci_0395"
/db_xref="GeneID:8331722"
CDS complement(441225..441893)
/locus_tag="Caci_0395"
/inference="similar to AA sequence:KEGG:SAV_696"
/note="KEGG: sma:SAV_696 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111188.1"
/db_xref="GI:256389624"
/db_xref="GeneID:8331722"
/translation="MQKFETPSPVTVVLDIPAGQIRLVAGERADTVVEVLPSEASKRR
DAKAAAQTTVEFSGGVLRIATADPHKILGSSGSLDVTIALPAGSRIEGKAGAAELHST
GRLGEVAFDGGYRSVELDEVAGARIKMHMGDVSIAKLTGPAQLRNGKGDITVAEAAGG
AVDLRTDMGDLKIAAAPGVSGTLDASSASGRITNALKNSEGAGAGLNIKATTSHGDII
ATSL"
misc_feature complement(441234..441467)
/locus_tag="Caci_0395"
/note="Domain of unknown function (DUF4098); Region:
DUF4098; pfam13345"
/db_xref="CDD:222058"
gene complement(442044..442469)
/locus_tag="Caci_0396"
/db_xref="GeneID:8331723"
CDS complement(442044..442469)
/locus_tag="Caci_0396"
/inference="protein motif:PFAM:PF03928"
/note="PFAM: protein of unknown function DUF336;
KEGG: sma:SAV_4279 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111189.1"
/db_xref="GI:256389625"
/db_xref="InterPro:IPR005624"
/db_xref="GeneID:8331723"
/translation="MSISLVQAEAVVAAARVGADERGVAVAFAVVDAGGNLVAFARGD
GANLITVDTAIGKAFTAISIGADSINLTAAIQPGGPLFGTGLVLAGARSFVPYGGGVL
IRVDGRVVGALGIAGAASSEVDHEIAAAAAVQVPVRVAA"
misc_feature complement(442089..>442364)
/locus_tag="Caci_0396"
/note="Domain of unknown function (DUF336); Region:
DUF336; pfam03928"
/db_xref="CDD:217798"
gene complement(442903..444330)
/locus_tag="Caci_0397"
/db_xref="GeneID:8331724"
CDS complement(442903..444330)
/locus_tag="Caci_0397"
/inference="protein motif:PFAM:PF07719"
/note="PFAM: hypothetical protein; TPR repeat-containing
protein; hypothetical protein;
SMART: helix-turn-helix domain protein; hypothetical
protein;
KEGG: sma:SAV_4421 regulatory protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111190.1"
/db_xref="GI:256389626"
/db_xref="InterPro:IPR001387"
/db_xref="InterPro:IPR001440"
/db_xref="InterPro:IPR011717"
/db_xref="InterPro:IPR013026"
/db_xref="InterPro:IPR013105"
/db_xref="GeneID:8331724"
/translation="MPLSGDGQQTQGQIGARLQEVRTRRGLTQRALAEPGYTAAYVST
LEAGKARASEAALRYFAERLAISYEELATGVPAGLRAEIRDGLAEANAAMDAGRAAEA
EALLAALLERAAGNDVPDLAADVRVALGAFLLRRGDLAAGREQFEQAEALLADRPLVA
RVRAIRGRATAYYLEGDVRYSCYLLENTISELNGGGLPDPASLVLLYAAVIGPYLELG
ALERATKAATLALDLAPRVADPIAVATLHRSVARTLAAGGRFDEAEAALVKAQDVYQQ
WEIRAELAQCHWMRGYLYAQHERFADAETELRTAATMLRAADAVFYAVQVEVELADVR
WRLGHTDEAEHLLTRLLADLGPGHGAVHAAAAHRLLGLIRERADDPQTAERHYRQAIE
LQQDADVAGDLADTSRLLGDLLDKQGRTREAVAAYRNGLTALARPGTTTLGAAPLPPP
VISALDSVHRAVHVVPGGGDSAAHE"
misc_feature complement(<444076..444294)
/locus_tag="Caci_0397"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:224314"
misc_feature complement(444118..444288)
/locus_tag="Caci_0397"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:238045"
misc_feature complement(order(444190..444192,444262..444264,
444274..444276))
/locus_tag="Caci_0397"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238045"
misc_feature complement(order(444193..444195,444265..444267))
/locus_tag="Caci_0397"
/note="salt bridge; other site"
/db_xref="CDD:238045"
misc_feature complement(order(444187..444192,444202..444204,
444211..444213,444241..444246))
/locus_tag="Caci_0397"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
gene 444478..445764
/locus_tag="Caci_0398"
/db_xref="GeneID:8331725"
CDS 444478..445764
/locus_tag="Caci_0398"
/inference="protein motif:PFAM:PF00561"
/note="PFAM: alpha/beta hydrolase fold protein;
KEGG: sma:SAV_7423 prolyl aminopeptidase"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold protein"
/protein_id="YP_003111191.1"
/db_xref="GI:256389627"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR002410"
/db_xref="GeneID:8331725"
/translation="MPPAIRQTDHLFTVPLHHDRPRGEQIELYAREVTADETLPWLVF
LQGGPGHRSPRPLPAALATGWLSRALQDYRVLLLDQRGTGRSTPATRQTLPSRGDARR
QAEYLTAFRADSIVRDAELVRRQLTGGAPWSVLGQSFGGFCTISYLSDAPEGLAEVFI
TGGVPTLEGDADDVYRAAYPRMEDKNALLYHRYPQDVDIARSIAEFLREHETVLPDGT
LLTVEAFQSLGIMLGATDGVDRLHYLLEDPFCQTAHRTELSDRFQWQVQAALSFAERP
LYALLHEAIYAQGSGPTAWAASRVRKQFPRFDAERVLSETGTPLLFTGETIHPWHFRT
DPALRPLRAVADLLAGYEDWRPLYDTSVLAANTVPTFATVYTDDLYVDPKQSLTTADA
IRALTVHVSDDHEHDGLTASGTDVLDHLLGMARDAR"
misc_feature 444694..>445014
/locus_tag="Caci_0398"
/note="alpha/beta hydrolase fold; Region: Abhydrolase_1;
pfam00561"
/db_xref="CDD:201306"
gene 445809..446606
/locus_tag="Caci_0399"
/db_xref="GeneID:8331726"
CDS 445809..446606
/locus_tag="Caci_0399"
/inference="protein motif:PFAM:PF03080"
/note="PFAM: protein of unknown function DUF239;
KEGG: gvi:gll1344 unknown protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111192.1"
/db_xref="GI:256389628"
/db_xref="InterPro:IPR004314"
/db_xref="GeneID:8331726"
/translation="MPAQALRALLGNLRTRIAAAAVSAAALGAVVVLPASSAHAAQCW
YGSCFSYVTGRQYTNTTGASVTMEQAAPRNVAADGHSLQELSLQTSGGTTVADTIEIG
WTVDPELNGDYQPHLFVFHWVDGQPTCYNACGFVQVSTTVRAGMAVTPGTTGVFALRY
YQGNWWAYYNNVAFGYFPGSAWKGAFTSAQIVSAFGEVASDSAPSCTQMGDGIYGSQS
GASSISGYQLYGSTDRPALTVTATDPGSYNYGAVTGTSFNLGGPGAC"
sig_peptide 445809..445931
/locus_tag="Caci_0399"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.993 at
residue 41"
misc_feature 445992..446594
/locus_tag="Caci_0399"
/note="Domain of unknown function (DUF239); Region:
DUF239; pfam03080"
/db_xref="CDD:217358"
gene 446596..447435
/locus_tag="Caci_0400"
/db_xref="GeneID:8331727"
CDS 446596..447435
/locus_tag="Caci_0400"
/inference="protein motif:PFAM:PF03080"
/note="PFAM: protein of unknown function DUF239;
KEGG: hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111193.1"
/db_xref="GI:256389629"
/db_xref="InterPro:IPR004314"
/db_xref="GeneID:8331727"
/translation="MLAKVRVGLVSGLFSMSLLGSTAAAAVPAASAAVLAPRVPTVSA
AATDSGPICWYGACYDYVSGHQWTDTTGVSVLMKVEKPVVNPAQTGEHSLQEIALQNT
ARTSTVEIGWTVDPELNGDNQPHLFVYHWVDGQESCYNACGFVQVSRAIKPGMALHPN
EAANFATQNIHGDWWVFFRDEPVGYFPGSLWSGTYQTAQLVSVFGEVAENTADSPSCT
QMGDGRFGSSPAASWIRDYRIAGTKDAPNLAVSSTSPNHYDAGAVTPTSFKLGGPGTG
ACS"
sig_peptide 446596..446694
/locus_tag="Caci_0400"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.399 at
residue 33"
misc_feature 446809..447414
/locus_tag="Caci_0400"
/note="Domain of unknown function (DUF239); Region:
DUF239; pfam03080"
/db_xref="CDD:217358"
gene complement(447462..448199)
/locus_tag="Caci_0401"
/db_xref="GeneID:8331728"
CDS complement(447462..448199)
/locus_tag="Caci_0401"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: kra:Krad_4255 TetR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003111194.1"
/db_xref="GI:256389630"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331728"
/translation="MTNAKTEMAKPQVAAPAAPRPLRRDAERNRQLIIDTAKTVFAAR
GLDASLDEVAHEAGLGVGTVYRRFPNRDALIDALFDDMLASITRIVAESMALPRAWDG
LVHFMTAMLESQGRDKALRDLMLSRQKYLDQCELDREEVVRETVQPALYDIIGRAKAE
GDLRPDVVPADVGVLLISAVGVVDFTAPADPEVWRRHLAVLLDGLRARAAGDTTVLAP
APLDDEQLDLCMSGWKYGTRETPRRRS"
misc_feature complement(447570..448112)
/locus_tag="Caci_0401"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:224228"
misc_feature complement(447966..448103)
/locus_tag="Caci_0401"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
misc_feature complement(<447540..>447695)
/locus_tag="Caci_0401"
/note="SGNH_hydrolase, or GDSL_hydrolase, is a diverse
family of lipases and esterases. The tertiary fold of the
enzyme is substantially different from that of the
alpha/beta hydrolase family and unique among all known
hydrolases; its active site closely...; Region:
SGNH_hydrolase; cl01053"
/db_xref="CDD:242274"
gene 448361..449890
/locus_tag="Caci_0402"
/db_xref="GeneID:8331729"
CDS 448361..449890
/locus_tag="Caci_0402"
/inference="protein motif:TFAM:TIGR00711"
/note="TIGRFAM: drug resistance transporter EmrB/QacA
subfamily;
PFAM: major facilitator superfamily MFS_1;
KEGG: sma:SAV_7490 transmembrane efflux protein"
/codon_start=1
/transl_table=11
/product="EmrB/QacA subfamily drug resistance transporter"
/protein_id="YP_003111195.1"
/db_xref="GI:256389631"
/db_xref="InterPro:IPR001411"
/db_xref="InterPro:IPR004638"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331729"
/translation="MADLRTTGAEAQTADAAPADHTDHTDPHHARRWFILGIIGLAQL
MIVLDVTIVNIALPDAQKALGFSNGDRQWIVTAYSLAFGSLLLLFGRVSDVIGRRAMF
LIGLVGFAAASALGGAAPNFEILVLARALQGVAGAMLAPAALSLLSTTFTEAKERATA
FAVFGGIAGSGAAIGMLLGGVLTEFLNWRWTLFVNVGISVIAIAGAAVLIPRHARSAD
RPSLDIPGTVLVSAGLFGIVYGFANAESHPWSAPGTWGFLVAGLVLLGAFTFWQTRTK
HPLLPLRVILERNRGGSYLAMFLTGIGMFGVFLFLNYYLQEILRYSPVMTGVAFLPMV
AALMITATISTTQLYPRVGAKILVFAGMLLAGAGMVWLTGISLTSSYAANILGPTVVV
GIGMGAIFAPAMNAATSGVEAGDAGVASAMVNTAQQIGGSIGTALLNSLAASALTSYL
VGKNATNPVVQANAAIHSYVVAFWWAAAIFGVGAIICGLILKSGKPDPADPDAAPAIH
A"
misc_feature 448460..449662
/locus_tag="Caci_0402"
/note="drug resistance transporter, EmrB/QacA subfamily;
Region: efflux_EmrB; TIGR00711"
/db_xref="CDD:129794"
misc_feature <449234..449662
/locus_tag="Caci_0402"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(449980..450621)
/locus_tag="Caci_0403"
/db_xref="GeneID:8331730"
CDS complement(449980..450621)
/locus_tag="Caci_0403"
/inference="protein motif:PFAM:PF00440"
/note="PFAM: TetR family transcriptional regulator;
KEGG: fal:FRAAL3956 TetR family transcriptional
regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003111196.1"
/db_xref="GI:256389632"
/db_xref="InterPro:IPR001647"
/db_xref="GeneID:8331730"
/translation="MPSTLSTDDREVEGTLDFVRLTDMAPARTLRADAARNREKLLSA
ATRLFAERGLDVPMEHIARTAGVSIGTLYAHFPTRVALFEAIFPTRLAALQELGRKAL
AEPDAWQAFVGYLQDVFAMHAEDHGLNEVLARDIPDAAGVVQSCRQGAGHAAELIDRA
HADGRLRADFTITDMSTLTRAMTRVIRDSINGGTDEWRRFLGIYIDGLRAENP"
misc_feature complement(450364..450501)
/locus_tag="Caci_0403"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene 450664..451374
/locus_tag="Caci_0404"
/db_xref="GeneID:8331731"
CDS 450664..451374
/locus_tag="Caci_0404"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR
domain protein;
KEGG: fal:FRAAL2466 short chain dehydrogenase"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_003111197.1"
/db_xref="GI:256389633"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8331731"
/translation="MPTAVVIGVGPGLGMSIARRFGGAGHSVALVSRSDARHADYLAE
LASAGIESEAFVADVNDREQVGSVVDAIEAKHGIDVLYYGPGASDVSQPAPITETTAD
EVRASMGVVYAAVDIVGRVLPGMMARGRGGLLFAGGLSAVVPVPSLGALAVTSAALRN
YALTLNAGLADTGVYAGTLIIGGLIERGDIHGFVVAHPEMFGHVPLRTLNPDDIAAAA
WEMYAARDRAEETFSVLS"
misc_feature 450670..451329
/locus_tag="Caci_0404"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:245206"
misc_feature 450673..451341
/locus_tag="Caci_0404"
/note="short chain dehydrogenase; Validated; Region:
PRK07069"
/db_xref="CDD:180822"
misc_feature order(450685..450687,450691..450696,450700..450702,
450760..450768,450913..450921,451069..451077,
451114..451116,451126..451128,451204..451215)
/locus_tag="Caci_0404"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(450994..450996,451075..451077,451114..451116,
451126..451128)
/locus_tag="Caci_0404"
/note="active site"
/db_xref="CDD:187535"
gene complement(451736..452164)
/locus_tag="Caci_0405"
/db_xref="GeneID:8331732"
CDS complement(451736..452164)
/locus_tag="Caci_0405"
/inference="similar to AA sequence:KEGG:SACE_3470"
/note="KEGG: sen:SACE_3470 dual specificity protein
phosphatase"
/codon_start=1
/transl_table=11
/product="dual specificity protein phosphatase"
/protein_id="YP_003111198.1"
/db_xref="GI:256389634"
/db_xref="GeneID:8331732"
/translation="MAELWDPAADGVLHLPSGRLIRGRGLSRPMPDGPAPSFAVYLLG
KQPPDVSWESRWVRWPDFRLPADRAAARECFVEAWQRCETERVEVACAGGRGRTGTAL
ACIAVLDGVAPDAAVAYVREHYSPHAVETPWQRRFVAAFR"
gene complement(452188..452937)
/locus_tag="Caci_0406"
/db_xref="GeneID:8331733"
CDS complement(452188..452937)
/locus_tag="Caci_0406"
/inference="protein motif:PFAM:PF02308"
/note="PFAM: MgtC/SapB transporter;
KEGG: gdj:Gdia_2872 MgtC/SapB transporter"
/codon_start=1
/transl_table=11
/product="MgtC/SapB transporter"
/protein_id="YP_003111199.1"
/db_xref="GI:256389635"
/db_xref="InterPro:IPR003416"
/db_xref="GeneID:8331733"
/translation="MSASILWEEPTGQGWTQVGELTTALVLSSAIGLEREIRQKAAGL
RTYTIIGLGAALFMLVSKYGFTDVLRPGLVQLDPSRVAAQIVSGLGFIGGGVIFMRRD
SVRGLTTAAAMWLTAGVGAAAGAGLGLLALLTTVAYFVVCYGLRPLTHWMPALRTPPV
TYRIEYQDGRGLLRTILDICTGAGFFVASFSGTGHDERDAQREPGAHPHTVEVVLTLH
GRGNANALTEQLVDTSGIVAVAYNHEDDEFT"
misc_feature complement(<452596..452877)
/locus_tag="Caci_0406"
/note="MgtC family; Region: MgtC; pfam02308"
/db_xref="CDD:111223"
gene 453076..453852
/locus_tag="Caci_0407"
/db_xref="GeneID:8331734"
CDS 453076..453852
/locus_tag="Caci_0407"
/inference="similar to AA sequence:KEGG:Franean1_1635"
/note="KEGG: fre:Franean1_1635 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111200.1"
/db_xref="GI:256389636"
/db_xref="GeneID:8331734"
/translation="MKALRKPERHAARQAWRMPGADLDRMFTLVRAVGQVELKFTVAD
ASFDAVRGLLGVGVERVRNVYYLDTPDLTLRRHGVLARVRGGQRPNDSVVKLRPIDPG
RVPTAMLRCEDFTVEVDVTPDSFICSGALKQRLPGNAVERAVAARTPLRTLFSEDQIA
LLDSRLSGRLTIDDLDPLGPVEVHRTRPRDGEPGRGLELQEWLYPDGSLLLEVSTRCT
ATDLLQTAIQAKALLDEHGIQQAGPCPTKADTTLDYFTRQ"
gene complement(454259..455722)
/locus_tag="Caci_0408"
/db_xref="GeneID:8331735"
CDS complement(454259..455722)
/locus_tag="Caci_0408"
/inference="protein motif:PFAM:PF07690"
/note="PFAM: major facilitator superfamily MFS_1;
KEGG: sma:SAV_6391 drug/proton antiporter"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily protein"
/protein_id="YP_003111201.1"
/db_xref="GI:256389637"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331735"
/translation="MPQTDSLARDAERVGSGAEARFDSDARSGSGSGSSSGSARSVGS
PKLTLFAALLGFVMIALDASAVNVALPAVGRGLGGSTAGLQWIVDAYTLMFAALLLSA
GAFSDRLGASRLYGGGAAAFTLASVACGLAPSLGFLIGARLVQGSAAALMLPSSLALV
RQAFPDASARAAAIAQWTMAGAASTAVGPVLGGALTSSVSWRSIFFLNLPVGLVILGA
LRRTERSVRRPAPLDLPGQLTAIVGLAALTYGVISGGASGFGRPQAWASVLLALVSFG
AFGVVEHRATEPMLPLGLLRDRVVAVCLAVGFVVNAAYYGLIFVFGLFAQDILGRSAV
GAGLVFMPTAILCTITNLFSARAAARWGARTPVLVGQLACAAGLLVLLLVNTHTSALE
LALLLLPLAGGLGFAVPSLTAMMLSGIAPERAGLAGGVLNSFRQTGGALAVAGFGALV
AQHGGFVTGLHVSLLISVALLAVTTLGTLALPKVGRR"
misc_feature complement(<455045..455578)
/locus_tag="Caci_0408"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(455168..455170,455186..455191,
455198..455203,455240..455242,455249..455254,
455261..455266,455273..455278,455414..455419,
455423..455428,455438..455440,455447..455452,
455459..455461,455510..455515,455519..455527,
455534..455536))
/locus_tag="Caci_0408"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 455920..456831
/locus_tag="Caci_0409"
/db_xref="GeneID:8331736"
CDS 455920..456831
/locus_tag="Caci_0409"
/inference="protein motif:PFAM:PF01381"
/note="PFAM: helix-turn-helix domain protein;
SMART: helix-turn-helix domain protein;
KEGG: art:Arth_0445 transcriptional regulator, XRE family"
/codon_start=1
/transl_table=11
/product="XRE family transcriptional regulator"
/protein_id="YP_003111202.1"
/db_xref="GI:256389638"
/db_xref="InterPro:IPR001387"
/db_xref="GeneID:8331736"
/translation="MTEQQPELGRFLRARRAGVAPADLGLPLGTGTRRTPGLRREELA
ALAGVSIDYYIRLERGKETRPSPAVVDALGRALRLDPEELAYLRELAAQAARGGAPTR
QRPAASRAVRPTLRRLLETVRPCPAYVLSRTNDVLAANPGGLFLTPGMVDWPEKKRNT
IRYTFLHPQARTLWPDWDIKARACVAHLRAVAGTDPDDPELAAIVGELAVKSPEFSHM
WERYDVRRVGNGQKTFLHPIVGTMTLCHEVMEINHTGGGRIVVYSAEPGTPDHDAMVL
LDMEAATALASRSNASGAVSVDADRDG"
misc_feature 456040..>456174
/locus_tag="Caci_0409"
/note="Predicted transcriptional regulators
[Transcription]; Region: HipB; COG1396"
/db_xref="CDD:224314"
misc_feature <456040..456171
/locus_tag="Caci_0409"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:238045"
misc_feature order(456040..456042,456073..456075,456082..456084,
456094..456099)
/locus_tag="Caci_0409"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
misc_feature 456091..456093
/locus_tag="Caci_0409"
/note="salt bridge; other site"
/db_xref="CDD:238045"
gene 456966..458864
/locus_tag="Caci_0410"
/db_xref="GeneID:8331737"
CDS 456966..458864
/locus_tag="Caci_0410"
/inference="ab initio prediction:Prodigal:1.4"
/note="KEGG: eba:ebA2079 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111203.1"
/db_xref="GI:256389639"
/db_xref="GeneID:8331737"
/translation="MSAGTAVPDAAESVGELKPSRRSRRSAPDFASSLLRRDVFGVRL
GVLLLILPVILAGLGMQLTSRQGWNHPPDSRYYVAMMARDVGYSWSHSIHAELRVQPD
NHLSPWYFADNDPTWQMVRTRLLYPVLSVPFIWMWGLSGGSMAVPVLGTVLFLWATAR
LLQRLYGPAIAVIVAGGFSLTVPVNGFTWAGTDTLALGLAAVLVLNLPIERRIGKANL
VWIGAASIFIALTRQVGVLAPAMAGAGWLWLLVRERQWRNRWLGSLIVTAATTFLFQV
LSMTLAPANTAGVIGHGETSYWGIFREFVHYLRIVTEEACTYMWHNDRMLYALFIAAG
ISVLARFKSDATAVFVGAVGATYVITAGVGFSGFMRYEMVMFPAAAVAAGQLVQLALG
DHVRQPVGAVAELEPAPTRTRTWFSDRFAALALTKPGRFLGLNLQRQDRWKPQLLFNS
LVLAIVIGVSLDGSWSSTVNAPASPSYAAAQGGSGYAVPPLAKPSADQTLRIMFAQAI
GIAHGSAQLQGALDWTHAMQYRPMAPDQPGWPNRAKDGTAVVNPNSMGMDIDMSEAYG
RGLSLNSTVKPDSVKILSRQVSEYGEDVVFTVEDTSGKVHQGTATTLYPIWHKNDPAT
VTALVFDA"
gene complement(458870..459403)
/locus_tag="Caci_0411"
/db_xref="GeneID:8331738"
CDS complement(458870..459403)
/locus_tag="Caci_0411"
/inference="similar to AA sequence:KEGG:SACE_4855"
/note="KEGG: sen:SACE_4855 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111204.1"
/db_xref="GI:256389640"
/db_xref="GeneID:8331738"
/translation="MHELKALLREYDRARAYTDDLWTDLTPDEVTWRPHEESSAIGWH
LGHQAHVAHFMIRNLTAAEPSPDPELDELMDSANPEKFRGALPTVERLTTFRNTVAQR
VHARIGAIADGQVGAPSQMTIVGSYLLVALINHEYQHDQWIGEVRAQNLGHALPADPT
ADGLRRVDGYLVLEPLG"
misc_feature complement(458975..459376)
/locus_tag="Caci_0411"
/note="DinB superfamily; Region: DinB_2; pfam12867"
/db_xref="CDD:221817"
gene complement(459406..460905)
/locus_tag="Caci_0412"
/db_xref="GeneID:8331739"
CDS complement(459406..460905)
/locus_tag="Caci_0412"
/inference="protein motif:TFAM:TIGR00711"
/note="TIGRFAM: drug resistance transporter EmrB/QacA
subfamily;
PFAM: major facilitator superfamily MFS_1;
KEGG: sma:SAV_7490 transmembrane efflux protein"
/codon_start=1
/transl_table=11
/product="EmrB/QacA subfamily drug resistance transporter"
/protein_id="YP_003111205.1"
/db_xref="GI:256389641"
/db_xref="InterPro:IPR001411"
/db_xref="InterPro:IPR004638"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
/db_xref="GeneID:8331739"
/translation="MSHLQTTSLGPNAAHDPHDPHGEHAPQHARRWWILAVICLAQLM
DVLDVTIVNIALPDAQKSLDFSVGDRQWIVTAYSLAFGSLLLFSGRVSDLVGRRRMFL
VGLVAFAAASALGGAAPDFGVLVTARAVQGAAGAMLAPAALSLLSTTFTEPKERAKAF
AVFGGVSGSGAAIGMLLGGVLTEFLNWRFTLYVNVAIAVVAFIGAATLIQRRNETQSE
IGERPKLDLPGTILVSAALFGIVYGFADVESHAWTAPSTWVSLTSGVVLLGVFAWWQR
QAANPLLPLRIVLDRTRGGSILAIFLGSIGLFGAFLFLNFYLQGVLHYSPLMTGVAFL
PMVVTLVIAGGICTTQLYPRFGAKLPVTAGMLIAAAAMVLLTDIGPHSTYAGTVLGPL
LVFGLGIGATIAPAMSAGTADVEPRDAGIASATVNTAQQIGGSIGTALLNSLAASALG
RYLVGKDAASHAVQTDAAIHSYSVAFWATGAIFAGGAVVCGLVLRRGKP"
misc_feature complement(459592..460794)
/locus_tag="Caci_0412"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:219516"
misc_feature complement(459592..>460023)
/locus_tag="Caci_0412"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(460925..461656)
/locus_tag="Caci_0413"
/db_xref="GeneID:8331740"
CDS complement(460925..461656)
/locus_tag="Caci_0413"
/inference="protein motif:PFAM:PF00106"
/note="PFAM: short-chain dehydrogenase/reductase SDR; KR
domain protein;
KEGG: amr:AM1_3890 oxidoreductase, short chain
dehydrogenase/reductase family protein"
/codon_start=1
/transl_table=11
/product="short-chain dehydrogenase/reductase SDR"
/protein_id="YP_003111206.1"
/db_xref="GI:256389642"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR013968"
/db_xref="GeneID:8331740"
/translation="MTVKTALITGTSRAAGLGFAVARELAEQGFHVILTARDRAAAEP
LAEQLRLDGHAATALRLDLSDRASMDAVAKHVAETFGHLDVLVNNASGMPDFQVLSAL
EADMDTVRAALEVSVIGPWGLVEAVLPLLKAAPAARVVNVSSLSAQQIATGLNLGAPL
RSPAYSMAKYMLNALTSVLARALADTPILVNAVDPGNTATHPERGDDDSDRPAAESAR
DIVRAATFGSDGPSGVLFSGGQPVA"
sig_peptide complement(461588..461656)
/locus_tag="Caci_0413"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 0.861) with cleavage site probability 0.779 at
residue 23"
misc_feature complement(460931..461647)
/locus_tag="Caci_0413"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:245206"
misc_feature complement(460955..461647)
/locus_tag="Caci_0413"
/note="Short-chain alcohol dehydrogenase of unknown
specificity [General function prediction only]; Region:
COG4221"
/db_xref="CDD:226674"
misc_feature complement(order(461063..461074,461150..461152,
461162..461164,461225..461233,461384..461392,
461543..461551,461606..461608,461618..461623,
461627..461629))
/locus_tag="Caci_0413"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(461150..461152,461162..461164,
461225..461227,461309..461311))
/locus_tag="Caci_0413"
/note="active site"
/db_xref="CDD:187535"
gene 461750..462451
/locus_tag="Caci_0414"
/db_xref="GeneID:8331741"
CDS 461750..462451
/locus_tag="Caci_0414"
/inference="protein motif:PFAM:PF02909"
/note="PFAM: Tetracyclin repressor domain protein; TetR
family transcriptional regulator;
KEGG: sma:SAV_775 TetR family transcriptional regulator"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_003111207.1"
/db_xref="GI:256389643"
/db_xref="InterPro:IPR001647"
/db_xref="InterPro:IPR004111"
/db_xref="GeneID:8331741"
/translation="MAAEPAEPAEPAEPAPRKTPITLERITDAALQVVATEGYDALTI
RRVTNVLGTGPSSLYAHIATKTDIDDLLIGRLCSEITLPDPDPATWQHQLRDVYAQLR
DQYLKYPGISKAALATVSANPETLRVSEGIFAILLSAGIDPQTAAWTMDAITLYVAAY
ALELSLVHHRRKDPTTPWLLSHEALTAHLTSLPEATFPQTRRHAAALTSGTGHQRFDF
ALTLLIDNLTSQTKS"
misc_feature 461819..462448
/locus_tag="Caci_0414"
/note="tetracycline repressor protein TetR; Provisional;
Region: PRK13756"
/db_xref="CDD:172294"
misc_feature 461825..461953
/locus_tag="Caci_0414"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
misc_feature 461993..462430
/locus_tag="Caci_0414"
/note="Tetracyclin repressor, C-terminal all-alpha domain;
Region: TetR_C; pfam02909"
/db_xref="CDD:202462"
gene 462581..464764
/locus_tag="Caci_0415"
/db_xref="GeneID:8331742"
CDS 462581..464764
/locus_tag="Caci_0415"
/inference="protein motif:PFAM:PF00176"
/note="PFAM: SNF2-related protein; helicase domain
protein;
SMART: DEAD-like helicases; helicase;
KEGG: sgr:SGR_1018 hypothetical protein"
/codon_start=1
/transl_table=11
/product="SNF2-related protein"
/protein_id="YP_003111208.1"
/db_xref="GI:256389644"
/db_xref="InterPro:IPR000330"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:8331742"
/translation="MPRGQAFTNSSGVKSVLHAAADAETAIREMHEGDERRHQAVRDA
YQASHAVAVLGRLRSISIERLRDVTGARLPVTKLEEAGYKSIADLLEATPEQLQQVPG
IGTKGAERTVDAARRIADAAMSGTHVTADMDLRVADAATLLAALYRVQTADRVLLKVR
EPAKRIGGALTSLADTAKPLSSRMRRVITGRAKREEAQGAVDRLEGLLGDPATNQDLE
RIKAANEKLRGVKPPRPSVVRNDFEKRSADYFSTLSRIAGARANGEAARGFLPTSLAD
RIGVQQLDETHLRVSLRAYQAFGVRFALAQKRVVIGDEMGCGKTVEAIATLAHLRAEG
AKHFLVVVPASVLINWLREVRAHSSLRPYRLHGPQGEAALKAWLSGGGVGITTFEALP
NLELPPRTRISMLVVDEAHYVKNPNTMRSRAVRAWTDRVERVMFLTGTPMENRVEEFR
NLVGYLQPDLVDSVGEIDAVAGSEAFRKAVAPAYLRRNQEDVLSELPEMVKIEEWEEF
GPEEEAMYRDAVAARNFMAMRRAAYATGDPATSAKLRRLVEIVDEAEANSRKVVVFSY
FRDVLDTVCRALGDRASGPLTGSMQPQHRQELVDAFTAAKKHAVLVSQIQAGGVGLNM
QAASVVILCEPQVKPTLETQAIARAHRMGQIRRVQVHRLLVADSVDQRMLEILDAKSG
LFDAYARRSETAETMPEAKDLSDASVRKQLIDAEQERLGLDKARS"
misc_feature 463433..463957
/locus_tag="Caci_0415"
/note="DEAD-like helicases superfamily; Region: DEXDc;
smart00487"
/db_xref="CDD:214692"
misc_feature 463499..463903
/locus_tag="Caci_0415"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:238005"
misc_feature 463526..463540
/locus_tag="Caci_0415"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238005"
misc_feature 463802..463813
/locus_tag="Caci_0415"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:238005"
misc_feature 464189..464560
/locus_tag="Caci_0415"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:238034"
misc_feature <464207..464641
/locus_tag="Caci_0415"
/note="Superfamily II DNA/RNA helicases, SNF2 family
[Transcription / DNA replication, recombination, and
repair]; Region: HepA; COG0553"
/db_xref="CDD:223627"
misc_feature order(464276..464287,464339..464344,464423..464431)
/locus_tag="Caci_0415"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:238034"
misc_feature order(464447..464449,464510..464512,464522..464524,
464531..464533)
/locus_tag="Caci_0415"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:238034"
gene 464809..465810
/locus_tag="Caci_0416"
/db_xref="GeneID:8331743"
CDS 464809..465810
/locus_tag="Caci_0416"
/inference="similar to AA sequence:KEGG:SACE_2039"
/note="KEGG: sen:SACE_2039 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111209.1"
/db_xref="GI:256389645"
/db_xref="GeneID:8331743"
/translation="MEPARLGQLRRDLAHAVRMGPFSATLHLAIEASGMTLEQVRLEL
AARGAFVSMATLSYWRRGMSRPERPESLHAVELLEEVLALSTGALTGQLGPRRPRGRT
AARRESGLDVVDAWDAHREYDHLLQGLDPAGRLELTRVSTLDRYSLGADRRELSLTTC
QVLRAEADDLSRMTVLYRTYDPPSPSPVLKALNGCRVGRVRIAQDSGFVAAELLFDRV
LRRGETAVVDYELTGLSPSPPTETDFYQRFFPYATALYVLRVQFDPATVPARCVRYER
RTETAPDQGVREVWVGATGQAHVMATDVPPGVVGLRWDWGAGLHDLPSLGRGDPPAR"
gene complement(465862..467640)
/locus_tag="Caci_0417"
/db_xref="GeneID:8331744"
CDS complement(465862..467640)
/locus_tag="Caci_0417"
/inference="protein motif:PFAM:PF05345"
/note="PFAM: Ig family protein;
KEGG: bam:Bamb_0804 peptidase S8 and S53, subtilisin,
kexin, sedolisin"
/codon_start=1
/transl_table=11
/product="Ig family protein"
/protein_id="YP_003111210.1"
/db_xref="GI:256389646"
/db_xref="InterPro:IPR000209"
/db_xref="InterPro:IPR008009"
/db_xref="GeneID:8331744"
/translation="MRRILLAGVITSALSTVAAMAMVQPAEAAVSPQIVPASCASAPA
GHAHCNAVQLVPSGARPAAPTGFGPSDIQSAYNLGTNPGSGQTVAIVDAYDDPNAESD
LRTYRSQWGLSACTTANGCFSKVDQNGGTTYPSGDSGWGAEITLDLDAVSAACPGCHI
LLVEATTNDDNDLGAAVDEAVRLGAKFVSNSYSDAESDFTTGMDAHYNHPGVMIAAAT
GDNGTQSGSSAQFPATFPSVVAVGGTSLSQASNSRGWSESVWNKGGSGCSSLFAKPSY
QQNVTTNCAKRASADVSADANPNTGLAIYDSYGQSGWEEYGGTSLATPLISAMWAQAG
APASGDSGVSYLYANEAKFNDVTSGSNGSCGTVICNAGTGWDGPTGVGTPNGVSGFAS
GTTPPPPANDFSVSVSPASGSVNPGSSATSTVGTKVASGSAVTVQLSASGLPSGASAS
FNPASVTAGSSSTMTIATSASTPAGTYSVTVTGTAGSTTHTAAYSLTVNGTGGGGTVT
VSNPGTQLWFVGYQSQPLQIRASDSKNLALTFSATGLPPGLGISASGVISGTPTRAGT
YQVTVKATDSGGGSGSTTFGYQVYGF"
sig_peptide complement(467554..467640)
/locus_tag="Caci_0417"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.535 at
residue 29"
misc_feature complement(466483..467445)
/locus_tag="Caci_0417"
/note="Peptidase domain in the S53 family; Region:
Peptidases_S53; cd04056"
/db_xref="CDD:173788"
misc_feature complement(order(466681..466683,466981..466986,
466990..466992,467059..467070,467200..467202,
467212..467214))
/locus_tag="Caci_0417"
/note="active site"
/db_xref="CDD:173788"
misc_feature complement(order(466681..466683,467200..467202,
467212..467214))
/locus_tag="Caci_0417"
/note="catalytic triad [active]"
/db_xref="CDD:173788"
misc_feature complement(order(466513..466515,466525..466527,
466573..466578))
/locus_tag="Caci_0417"
/note="calcium binding site [ion binding]; other site"
/db_xref="CDD:173788"
gene 468043..469284
/locus_tag="Caci_0418"
/db_xref="GeneID:8331745"
CDS 468043..469284
/locus_tag="Caci_0418"
/inference="protein motif:COG:COG4934"
/note="KEGG: bmv:BMASAVP1_A0748 serine protease"
/codon_start=1
/transl_table=11
/product="protease-like protein"
/protein_id="YP_003111211.1"
/db_xref="GI:256389647"
/db_xref="InterPro:IPR000209"
/db_xref="GeneID:8331745"
/translation="MRTNLRPAHRRAAISLAAAAVLGITAAAVATSANAAGAPAAKSA
GPAWSRACDAPAPGMAACDALHVTNVPEHIRALGVTPNATPSGFGPADLRSAYKLPAN
GGAGQTVAIVDAYNDPNAAADMATYRSQFGLPACTVASGCFKQVSQTGTSTLPANNTG
WAGEISLDLDMVSAVAPNAHIILVEAKTASMANLGTAVNEAVKLGAKFVSNSYGGGES
SADTGYDTKYFQHSGVAITASSGDGGYGVEYPAASPYVTAVGGTALKKDSSARGWSES
VWSTNSTEGAGSGCSAYEPKPTWQKDTGCSKRTVADVSAVADPATGVAVYQTYGGSGW
AVYGGTSVASPLIAAVYADAGTPKASVPAANIYSHTSALNDVTTGKTATCTPKYLCTA
GTGFDGPTGWGTPNGLAAFTG"
sig_peptide 468043..468150
/locus_tag="Caci_0418"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.940 at
residue 36"
misc_feature 468301..469269
/locus_tag="Caci_0418"
/note="Peptidase domain in the S53 family; Region:
Peptidases_S53; cd04056"
/db_xref="CDD:173788"
misc_feature order(468532..468534,468544..468546,468676..468687,
468757..468759,468763..468768,469063..469065)
/locus_tag="Caci_0418"
/note="active site"
/db_xref="CDD:173788"
misc_feature order(468532..468534,468544..468546,469063..469065)
/locus_tag="Caci_0418"
/note="catalytic triad [active]"
/db_xref="CDD:173788"
misc_feature order(469165..469170,469219..469221,469231..469233)
/locus_tag="Caci_0418"
/note="calcium binding site [ion binding]; other site"
/db_xref="CDD:173788"
gene 469477..470052
/locus_tag="Caci_0419"
/db_xref="GeneID:8331746"
CDS 469477..470052
/locus_tag="Caci_0419"
/inference="protein motif:TFAM:TIGR02983"
/note="TIGRFAM: RNA polymerase sigma-70 factor, sigma-E
family; RNA polymerase sigma factor, sigma-70 family;
PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain
protein; sigma-70 region 4 domain protein;
KEGG: sen:SACE_1454 RNA polymerase ECF sigma factor"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-24 subunit"
/protein_id="YP_003111212.1"
/db_xref="GI:256389648"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR007630"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR014284"
/db_xref="InterPro:IPR014325"
/db_xref="GeneID:8331746"
/translation="MPEFTEFAQARQAHMRRMAFLLCGNWHDAQDVTQIALMNLCRAW
SRARRADSIDAYAHRVVVRAYLSQRKKVLRQQARAVEYARASERVPGSAEESGEPELR
MALLAALAQLPPRGRAVVVLRFWEDLSIEATAEALGCSTGNVKSQASRSLAKLREILG
DSLFDEGDGGGPRRAHVHAGVRPVWEVDGRA"
misc_feature 469483..469956
/locus_tag="Caci_0419"
/note="RNA polymerase sigma-70 factor, sigma-E family;
Region: SigE-fam_strep; TIGR02983"
/db_xref="CDD:132028"
misc_feature <469540..469710
/locus_tag="Caci_0419"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:218138"
misc_feature <469831..469944
/locus_tag="Caci_0419"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature order(469843..469845,469861..469866,469894..469896,
469900..469905,469909..469917,469921..469926,
469930..469932)
/locus_tag="Caci_0419"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 470049..471098
/locus_tag="Caci_0420"
/db_xref="GeneID:8331747"
CDS 470049..471098
/locus_tag="Caci_0420"
/inference="ab initio prediction:Prodigal:1.4"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111213.1"
/db_xref="GI:256389649"
/db_xref="GeneID:8331747"
/translation="MTENPGRLRALLDDTLTDEPPLLDLVPDAVTAAEQGRRRGRMMA
GGAAVAVLAVSVGAYAVADHGRSGTNGSPIVSPGISRSSTSAAPPVRLSHKSTLGIPG
LFDHPGTPQQECAKVNGPVMDSKAQLSSPAERNYCIQSLQTIRALLPDAVVVLNPFVD
FNQPAWSAPLVQTPDGGTAPGFTQAYQQSAKNSAKTVYLAGTFAFRTANGEGSIIYTT
TSPGVKAKPQGGDLPLDDGTSGRIAHEDSGSIDVTGVTADGVWYRLEISGVGPVYGAD
GSTLEPNLHTDGQGHSVFPDGYVAAGDSALHMHIPNPYTVTEVRQKIVDMGLGNVIHT
MGVDPLSDYPAPPAG"
gene complement(471179..471757)
/locus_tag="Caci_0421"
/db_xref="GeneID:8331748"
CDS complement(471179..471757)
/locus_tag="Caci_0421"
/inference="protein motif:PFAM:PF00355"
/note="PFAM: Rieske [2Fe-2S] domain protein;
KEGG: sco:SCO1356 iron sulphur protein (secreted protein)"
/codon_start=1
/transl_table=11
/product="Rieske (2Fe-2S) domain-containing protein"
/protein_id="YP_003111214.1"
/db_xref="GI:256389650"
/db_xref="InterPro:IPR005805"
/db_xref="InterPro:IPR005806"
/db_xref="GeneID:8331748"
/translation="MTTVDLAAATQTTDKHACLGHPEGTSRRTALLGIAVAAGAVCAG
CSSSKSSSASTSPSTSAAAGSTSAADSSSSSSAAGSSTGTASSSASSSGSSGAAGALA
ATSAVPVGGGTVLTDQKIVLTQPTAGTFKAFTAVCTHQGCVVGSVANGLIVCPCHGSA
YHIADGSVANGPAPTALAEIAIKVSGGEITQA"
misc_feature complement(471191..471439)
/locus_tag="Caci_0421"
/note="Rieske domain; a [2Fe-2S] cluster binding domain
commonly found in Rieske non-heme iron oxygenase (RO)
systems such as naphthalene and biphenyl dioxygenases, as
well as in plant/cyanobacterial chloroplast b6f and
mitochondrial cytochrome bc(1) complexes; Region: Rieske;
cd03467"
/db_xref="CDD:239550"
misc_feature complement(order(471275..471277,471281..471283,
471287..471292,471296..471298,471338..471343,
471347..471349))
/locus_tag="Caci_0421"
/note="iron-sulfur cluster [ion binding]; other site"
/db_xref="CDD:239550"
misc_feature complement(order(471281..471283,471287..471289,
471296..471298,471338..471343,471347..471349))
/locus_tag="Caci_0421"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:239550"
gene complement(471902..473704)
/locus_tag="Caci_0422"
/db_xref="GeneID:8331749"
CDS complement(471902..473704)
/locus_tag="Caci_0422"
/inference="protein motif:PFAM:PF00069"
/note="PFAM: serine/threonine protein kinase-related;
tyrosine protein kinase;
SMART: serine/threonine protein kinase; tyrosine protein
kinase;
KEGG: sma:SAV_2262 serine/threonine protein kinase"
/codon_start=1
/transl_table=11
/product="serine/threonine protein kinase"
/protein_id="YP_003111215.1"
/db_xref="GI:256389651"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR001245"
/db_xref="InterPro:IPR002290"
/db_xref="InterPro:IPR008271"
/db_xref="InterPro:IPR017441"
/db_xref="InterPro:IPR017442"
/db_xref="GeneID:8331749"
/translation="MSGWIVPGYTETGILGAGATGRVVAAVHDATGTEVAIKYLSPRF
VNNPDFIERFREEAALLAEIRHPNVVQLFEYAESDEGSAMVMELVSGPTLHRMLHENG
RMAPEAALSVMRGSLLGLGAAHQMGIVHRDYKPSNVLLNAYGISKLADFGVAERAEPV
SEIDPDATMPGGTGTPAYMAPEQWDGAPAQPVTDIYAVTASFFECLTGKVPFSADTVY
ELEEKHRTAPIPLDDVPEGVQPLVAHGLAKDPAERPQDVWAFVAEVERAATDAYGVDW
EERGRQDIVALWPLFGFFVPGGAAGGGGALETLGIGPNGPADPGEPGDLDAPHASGPE
DDDWDDGHGSHRSRLPDKVKTAAIVAGVAAVVLAIAAVAVAGNGKPAKKASPPSSTSS
VFTPTPDGPTGTPTSNDAGSAPTVAVSSSSSGSGSSSSSGSSSSSSGSSSSSSSSSRS
SSSSPSTKPSSKPSTSPSSVSLPSTPSTSSPSSSPSTPSTSTSSSPQVSIGATVSVVS
DPPGQCVASYNVTFAVGNAPGGTVVVNYTWHLASGRLVPEGPVTLKSNSSQGFGIRET
SNGTPKGSVVFVTWTTASSSGTSNSAPVSITCLK"
misc_feature complement(472943..473680)
/locus_tag="Caci_0422"
/note="Protein kinase domain; Region: Pkinase; pfam00069"
/db_xref="CDD:215690"
misc_feature complement(472943..473623)
/locus_tag="Caci_0422"
/note="Catalytic domain of Protein Kinases; Region: PKc;
cd00180"
/db_xref="CDD:173623"
misc_feature complement(order(473174..473185,473246..473248,
473255..473257,473288..473290,473294..473299,
473303..473305,473309..473311,473420..473422,
473426..473428,473438..473449,473495..473497,
473591..473593,473597..473599))
/locus_tag="Caci_0422"
/note="active site"
/db_xref="CDD:173623"
misc_feature complement(order(473255..473257,473288..473290,
473294..473299,473303..473305,473309..473311,
473426..473428,473438..473449,473495..473497,
473591..473593,473597..473599))
/locus_tag="Caci_0422"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:173623"
misc_feature complement(order(473174..473185,473246..473248,
473297..473299,473303..473305,473309..473311,
473420..473422,473426..473428))
/locus_tag="Caci_0422"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:173623"
misc_feature complement(order(473174..473185,473240..473260))
/locus_tag="Caci_0422"
/note="activation loop (A-loop); other site"
/db_xref="CDD:173623"
gene complement(473819..474556)
/locus_tag="Caci_0423"
/db_xref="GeneID:8331750"
CDS complement(473819..474556)
/locus_tag="Caci_0423"
/inference="similar to AA sequence:KEGG:SAV_6625"
/note="KEGG: sma:SAV_6625 hypothetical protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_003111216.1"
/db_xref="GI:256389652"
/db_xref="GeneID:8331750"
/translation="MTSMAGSTPERRRSWVRGRLRDGKVAREGGVQKGRVREGRVRRF
TVAERMVHRGTGVLMLLCVATAACLYIGPLAQAVGRRHLMVTVHEWSGILLPAPVLLG
LLSPAFRADLRRLNRFAPADRHWLRAVRRRLMEPPDRPAGKFNAGQKLYAGWIAGAVL
VMMFTGLLMWFTHLLPGISRTSSIFVHDILAWGIAVVLLAHMRKAYQDPESRRGMRTG
YVDRVWAKRNHSEWLAKDEPDGSHQQV"
misc_feature complement(473852..474439)
/locus_tag="Caci_0423"
/note="Cytochrome b (N-terminus)/b6/petB: Cytochrome b is
a subunit of cytochrome bc1, an 11-subunit mitochondrial
respiratory enzyme. Cytochrome b spans the mitochondrial
membrane with 8 transmembrane helices (A-H) in eukaryotes.
In plants and cyanobacteria; Region: Cytochrome_b_N;
cl00859"
/db_xref="CDD:242146"
misc_feature complement(473861..474439)
/locus_tag="Caci_0423"
/note="formate dehydrogenase, gamma subunit; Region:
formate-DH-gamm; TIGR01583"
/db_xref="CDD:130645"
gene complement(474528..475229)
/locus_tag="Caci_0424"
/db_xref="GeneID:8331751"
CDS complement(474528..475229)
/locus_tag="Caci_0424"
/inference="protein motif:PFAM:PF00174"
/note="PFAM: oxidoreductase molybdopterin binding;
KEGG: sma:SAV_6624 hypothetical protein"
/codon_start=1
/transl_table=11
/product="oxidoreductase molybdopterin binding"
/protein_id="YP_003111217.1"
/db_xref="GI:256389653"
/db_xref="InterPro:IPR000572"
/db_xref="GeneID:8331751"
/translation="MPDSEAENTPDGAPLARRTLFGVLGAGAAGLIAAPYLQAGWEKV
LAKASEDDPTGLSGLLPNPGGFRYYSVVGSVPRKDETNYELRIGGLVDRARSYTLADL
RALPQTRIVHDVQCTDGWRVEKTPFEGVRLSDLLDDAGVAGNGKALRFTCFDGAYSES
LTLEQARRDDVLIALQMQDAPITHDHGGPVRLYVAPMYFYKSAKWLSGISVTDRVVPG
YWEERGYDVDGWLDA"
misc_feature complement(474552..>474995)
/locus_tag="Caci_0424"
/note="Sulfite oxidase and related enzymes [General
function prediction only]; Region: COG2041"
/db_xref="CDD:224952"
misc_feature complement(474567..474986)
/locus_tag="Caci_0424"
/note="Oxidoreductase molybdopterin binding domain;
Region: Oxidored_molyb; pfam00174"
/db_xref="CDD:215768"
misc_feature complement(order(474615..474620,474624..474626,
474633..474635,474657..474659,474672..474674,
474759..474761,474882..474884))
/locus_tag="Caci_0424"
/note="Moco binding site; other site"
/db_xref="CDD:238198"
misc_feature complement(474882..474884)
/locus_tag="Caci_0424"
/note="metal coordination site [ion binding]; other site"
/db_xref="CDD:238198"
gene 475544..476416
/locus_tag="Caci_0425"
/db_xref="GeneID:8331752"
CDS 475544..476416
/locus_tag="Caci_0425"
/inference="protein motif:PFAM:PF00561"
/note="PFAM: alpha/beta hydrolase fold protein;
KEGG: nca:Noca_3836 alpha/beta hydrolase fold protein"
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase fold protein"
/protein_id="YP_003111218.1"
/db_xref="GI:256389654"
/db_xref="InterPro:IPR000073"
/db_xref="GeneID:8331752"
/translation="MTSLRLADGRNLEYLVAGPDGGTPLVFHHGTPFAAVLFEPMVEA
ATRHGLRFVVHSRPGYADSSPQPGRTIASVAEDVAALLAALDAERFLTVGWSGGGPHA
LACAALLPERCVAAATVAGVAPYRAEGLDWLDGMGAENIEEFAAAVSGAAPLTEFLSA
QAAGLANVQGADIAAALGELISEVDGRALSDAFADFTAAAFRKAVSAGIDGWHEDDLA
FIGDWGFDLAAIKTPVSVWQGDEDRMVPFAHGRWLAGALPGAAAQLLPNEGHLSLVLD
RFDDVVADLVKRLP"
misc_feature 475544..476299
/locus_tag="Caci_0425"
/note="Predicted hydrolases or acyltransferases
(alpha/beta hydrolase superfamily) [General function
prediction only]; Region: MhpC; COG0596"
/db_xref="CDD:223669"
gene 476447..476965
/locus_tag="Caci_0426"
/db_xref="GeneID:8331753"
CDS 476447..476965
/locus_tag="Caci_0426"
/inference="protein motif:PFAM:PF01243"
/note="PFAM: pyridoxamine 5'-phosphate oxidase-related
FMN- binding;
KEGG: rha:RHA1_ro03342 hypothetical protein"
/codon_start=1
/transl_table=11
/product="pyridoxamine 5'-phosphate oxidase-related FMN-
binding"
/protein_id="YP_003111219.1"
/db_xref="GI:256389655"
/db_xref="InterPro:IPR011576"
/db_xref="GeneID:8331753"
/translation="MLETPEELAALQTLLDDSAAAAGPHMRGIFTDDRRLNAAELSAR
LQGMCLIAVATVTADGRPLTGPFDGYFLHGSWWFSSAPDSVRIRHLQARPGVSATYLP
GEELSVTAHGRAELFDLHAPECDDLRQAMLDFYLPKQGPAFQEWMDGLEGGIGVRIDA
RKLFTFFASSTA"
misc_feature 476603..476932
/locus_tag="Caci_0426"
/note="Pyridoxine 5'-phosphate (PNP) oxidase-like
proteins; Region: PNPOx_like; cl00381"
/db_xref="CDD:241827"
gene 477158..477562
/locus_tag="Caci_0427"
/db_xref="GeneID:8331754"
CDS 477158..477562
/locus_tag="Caci_0427"
/inference="similar to AA sequence:KEGG:SCO3738"
/note="KEGG: sco:SCO3738 integral membrane protein"
/codon_start=1
/transl_table=11
/product="integral membrane protein"
/protein_id="YP_003111220.1"
/db_xref="GI:256389656"
/db_xref="GeneID:8331754"
/translation="MRTRSLLTTLACAAVMVGAGAESAFADATPTTQPSAVPTRSAAP
SVPPTTAPTATAMPSAVPSDSARTAAPATPPPTLPGRQVGAVPSGAPNTGEPVAASKG
HGEAEAVGASLALLLAGSGSVMVRRRKLKGRG"
sig_peptide 477158..477238
/locus_tag="Caci_0427"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.979 at
residue 27"
gene 477565..478272
/locus_tag="Caci_0428"
/db_xref="GeneID:8331755"
CDS 477565..478272
/locus_tag="Caci_0428"
/inference="protein motif:PFAM:PF04203"
/note="PFAM: peptidase C60 sortase A and B;
KEGG: sma:SAV_92 lipoprotein"
/codon_start=1
/transl_table=11
/product="peptidase C60 sortase A and B"
/protein_id="YP_003111221.1"
/db_xref="GI:256389657"
/db_xref="InterPro:IPR005754"
/db_xref="GeneID:8331755"
/translation="MRRAWTRGWPAVIAALLLASGCAAGSSTSAGGSGRNAGGTGTNP
AAATAGGPAGSQAGGTAGTPAGGTSGTSSAGNSTSAGAIARSDPVRLQIPAIGVDTSV
MALGLAADGTVQVPPIEKDSPAGWYNGSPTPGQTGPSVILGHVTVGKYGDGVFLKLAQ
LKPGAHVVVRLQDGASADFTVDSVRTVAKAQFPTQEVYGNVNRPELRLITCGGERTSD
GYLDNVLVFASLTGTAG"
sig_peptide 477565..477654
/locus_tag="Caci_0428"
/note="Signal predicted by SignalP 3.0 HMM (Signal peptide
probability 1.000) with cleavage site probability 0.402 at
residue 30"
misc_feature 477820..478254
/locus_tag="Caci_0428"
/note="Sortase E (SrtE) is a membrane transpeptidase found
in gram-positive bacteria that cleaves surface proteins at
a cell sorting motif and catalyzes a transpeptidation
reaction in which the surface protein substrate is
covalently linked to peptidoglycan for...; Region:
Sortase_E; cd05829"
/db_xref="CDD:99712"
misc_feature order(477889..477891,477946..477948,477982..477984,
477988..477990,477994..477996,478192..478197,
478222..478224,478231..478233)
/locus_tag="Caci_0428"
/note="active site"
/db_xref="CDD:99712"
misc_feature order(477994..477996,478195..478197,478231..478233)
/locus_tag="Caci_0428"
/note="putative catalytic site [active]"
/db_xref="CDD:99712"
gene 478313..478825
/locus_tag="Caci_0429"
/db_xref="GeneID:8331756"
CDS 478313..478825
/locus_tag="Caci_0429"
/inference="protein motif:TFAM:TIGR02937"
/not 